BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780384|ref|YP_003064797.1| serralysin [Candidatus
Liberibacter asiaticus str. psy62]
(665 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780384|ref|YP_003064797.1| serralysin [Candidatus Liberibacter asiaticus str. psy62]
gi|254040061|gb|ACT56857.1| serralysin [Candidatus Liberibacter asiaticus str. psy62]
Length = 665
Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats.
Identities = 665/665 (100%), Positives = 665/665 (100%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG 60
MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG
Sbjct: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG 60
Query: 61 EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL
Sbjct: 61 EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC
Sbjct: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK
Sbjct: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG
Sbjct: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS
Sbjct: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG
Sbjct: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF
Sbjct: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF
Sbjct: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK
Sbjct: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
Query: 601 EGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHDI 660
EGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHDI
Sbjct: 601 EGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHDI 660
Query: 661 NHDFS 665
NHDFS
Sbjct: 661 NHDFS 665
>gi|315122203|ref|YP_004062692.1| serralysin [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313495605|gb|ADR52204.1| serralysin [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 493
Score = 368 bits (944), Expect = 2e-99, Method: Composition-based stats.
Identities = 293/440 (66%), Positives = 345/440 (78%), Gaps = 1/440 (0%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG 60
M +IKPVYTTE IAD+LLRD YW+NYF++Y+P V T HRLSFD+TELN N QE+ RWA
Sbjct: 1 MDDIKPVYTTESIADYLLRDSYWANYFLKYQPTVYTDHRLSFDVTELNANGQEIVRWAFR 60
Query: 61 EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
EWSKVV++TFEETS SDI+F S++ GY+C P+ + RYFMEIN D DV YGI KGTIL
Sbjct: 61 EWSKVVNITFEETSNLSDIQFKSNDFGYICIPKNNFRYFMEINLDARDVDFYGIDKGTIL 120
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-MMDASFGY 179
SHNA+HEIGHALGL+H G YNGG P YGVDN Y NDSFLTSVMSYF ++ DASFGY
Sbjct: 121 SHNAIHEIGHALGLLHAGPYNGGSPTYGVDNQYANDSFLTSVMSYFDQNENRTTDASFGY 180
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
CATPMV+DIVAVQKIYGAPK +G+ I+KIEV+Q SPFIQTIYDSGG DLLD+ +G
Sbjct: 181 CATPMVADIVAVQKIYGAPKTLVGDTIHKIEVKQGYSPFIQTIYDSGGSDLLDVQSVGTF 240
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
NYIDLN ESWSSIGGY+KN+TIA+ T+IESV+G +GND +IGNSANN F+S GND F
Sbjct: 241 DNYIDLNPESWSSIGGYKKNVTIARDTIIESVIGGAGNDTIIGNSANNTLFKSGGNDTFY 300
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G+ G D Y YKIYRF+N I+YD ++ D + DVE LRF++ ID ++KQ+
Sbjct: 301 GADGWDVMVYSMLKNDYKIYRFKNEAIIYDMFRNEVDDIIDVESLRFSNDQIDLADIKQQ 360
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
SILEYTASY DL+Q IG DV S KHF +FGL EGRDITF+ YLYLGSYDDLR VFGSD+
Sbjct: 361 SILEYTASYGDLVQCIGNDVNASKKHFVDFGLREGRDITFNPYLYLGSYDDLRQVFGSDK 420
Query: 420 GAAARHYITHGVKEGRNPDA 439
+A RHYITHG +EGRNP
Sbjct: 421 DSATRHYITHGFREGRNPGF 440
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/80 (57%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
LEY AS+ DL+ + V A K HF +FG EGR ITFNP LYL SYDDL VFGSD
Sbjct: 363 LEYTASYGDLVQCIGND---VNASKKHFVDFGLREGRDITFNPYLYLGSYDDLRQVFGSD 419
Query: 587 RSAAAQHYITHGMKEGRALG 606
+ +A +HYITHG +EGR G
Sbjct: 420 KDSATRHYITHGFREGRNPG 439
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 62/224 (27%), Positives = 92/224 (41%), Gaps = 13/224 (5%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER-LRFADQCI--DSVNVKQRSIL 362
T + S L + D N + ++ + A I + +
Sbjct: 222 TIYDSGGSDLLDVQSVGTFDNYIDLNPESWSSIGGYKKNVTIARDTIIESVIGGAGNDTI 281
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD----DLRNVFGSD 418
++ L + G D F + S + D +Y + D+ D
Sbjct: 282 IGNSANNTLFKSGGNDTFYGADGWDVMVYSM---LKNDYKIYRFKNEAIIYDMFRNEVDD 338
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
++ + + LEY AS+ DL+ + + K HF +FG EG
Sbjct: 339 IIDVESLRFSNDQIDLADIKQQSILEYTASYGDLVQCIGNDVN---ASKKHFVDFGLREG 395
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
R +TF+ YLYLGSYDDLR VFGSD+ +A RHYITHG +EGRNP
Sbjct: 396 RDITFNPYLYLGSYDDLRQVFGSDKDSATRHYITHGFREGRNPG 439
>gi|296535274|ref|ZP_06897481.1| peptidase [Roseomonas cervicalis ATCC 49957]
gi|296264395|gb|EFH10813.1| peptidase [Roseomonas cervicalis ATCC 49957]
Length = 646
Score = 357 bits (916), Expect = 4e-96, Method: Composition-based stats.
Identities = 163/664 (24%), Positives = 266/664 (40%), Gaps = 104/664 (15%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKP----DVLTTHRLSFDITEL---NPNAQEVARWALG- 60
T +R D +L W + Y D + + D+ E + + R+ L
Sbjct: 10 TGDRNIDAVLWGVRWKATELTYSFPEDADGYSGEEPNIDLAEFQPVTADLADAIRFILET 69
Query: 61 EWSKVVDLTFEETSIHSD-----IKFISSNNGYVCTPRYDSRYF-MEINFDKADVWRYGI 114
++ V LTF E + SD S + PR+ + +I F++ I
Sbjct: 70 QFPAVAQLTFREVAPGSDSMLTFGTLTSEETAHANIPRFSPDSYAGDIWFNQQQFNLAPI 129
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNG--GYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G+ A+HEIGH+LGL H Y V + + DS S+M+Y +
Sbjct: 130 --GSYAYFTAMHEIGHSLGLKHGHDGGSPVEYGVSTLPLTADRDSVEFSIMTYRPYTAAN 187
Query: 173 MDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ-------------K 214
+ Y TPM+ DI A+Q +YGA + + G+ +Y+ +
Sbjct: 188 FEYYTIPDGSYPQTPMMYDIAALQYLYGANYETNAGDTVYRFDRDTGEMSVNGVGQGAPS 247
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE----KNMTIA------- 263
+ ++TI+D GG+D D + IDL+ W+ +G + M +A
Sbjct: 248 ANVILRTIWDGGGNDTYDFSNY-EADLRIDLSPGGWTVLGTEQRATMGQMEVAQAHLYNA 306
Query: 264 ------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
++IE+ +G SG+D + GN A+N G ++ DG G DT A +
Sbjct: 307 LLYQDDPRSLIENAIGGSGDDTIFGNGADNRLEGGLGTNILDGRGGFDTAVI-AAALTDI 365
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCI--DSVNVKQRSILEYTASYEDLIQVI 375
Y FE + ++ + K D +E F+D + D + YT +++ +
Sbjct: 366 TYSFEGRYLAFERPDEKGDLAIRIEAFAFSDGTVIRDDGFALLDDLYYYTQNHDIWLAGA 425
Query: 376 GQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
++ H+ G EGRD F + +YL D+ +HY G KE
Sbjct: 426 -----DAEAHYAASGWREGRDPNAFFSTAVYLAMNPDVAAA----GIDPLQHYREFGWKE 476
Query: 434 GRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV----------T 482
R+P AF Y+A + D+ A + +H+ +G EGR
Sbjct: 477 LRDPSAAFDTGAYLARYTDVAAAGINP-------LEHYLAYGQAEGRLPLPVVGELNVIG 529
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ YL S D+ S G HY T G +EGR+P+A F Y+ S+ D+ A
Sbjct: 530 FDASYYLLSNLDVLQAGLSAWG----HYSTQGWREGRDPNAYFDTSLYLESNPDVAAA-G 584
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
P H+ G+ EGR+ + F+ YL +Y D+ + H++ +G
Sbjct: 585 MDPL------QHYHESGWREGRTPSERFDGAAYLAAYADI----AEGQYDPLLHFLKYGR 634
Query: 600 KEGR 603
EGR
Sbjct: 635 DEGR 638
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 19/128 (14%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
+ ++ + L + H+ G EGRD FD+ LYL S D+
Sbjct: 529 GFDASYYLLSNLDVLQAG-----LSAWGHYSTQGWREGRDPNAYFDTSLYLESNPDVAAA 583
Query: 415 FGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+HY G +EGR P F Y+A++ D+ D HF +
Sbjct: 584 ----GMDPLQHYHESGWREGRTPSERFDGAAYLAAYADIAEGQYDPLL-------HFLKY 632
Query: 474 GCEEGRFV 481
G +EGR
Sbjct: 633 GRDEGRLA 640
>gi|328541869|ref|YP_004301978.1| peptidase M10, serralysin-like protein [polymorphum gilvum
SL003B-26A1]
gi|326411620|gb|ADZ68683.1| Peptidase M10, serralysin-like protein [Polymorphum gilvum
SL003B-26A1]
Length = 789
Score = 351 bits (899), Expect = 3e-94, Method: Composition-based stats.
Identities = 210/627 (33%), Positives = 310/627 (49%), Gaps = 36/627 (5%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
PVY+ ++IA L + N + R+ +V ++ DIT L + +A AL W+ V
Sbjct: 30 PVYSNDQIAHQLTDGYWNHNGYGRHSFNVAPGGSITVDITGLTSAGRSLATQALQAWTDV 89
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHN 123
+ F + + + I F +N+G + + + + + + W YG +
Sbjct: 90 TGINFAQVTGGAQITFDDNNSGAYASTWWSGTTITQASVNISTAWLSAYGTSIDSYSFQT 149
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCAT 182
+HEIGHALGL H G+Y+ G YGV N Y NDS+ S+MSYF +++ + AS+ Y T
Sbjct: 150 YVHEIGHALGLGHAGNYD-GSATYGVHNHYANDSWQASIMSYFDQVENTSIAASYAYAIT 208
Query: 183 PMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDS---------PFIQTIYDSGGDDLLD 232
PMV+DI+A+Q +YG P GN +Y P TIYD+GG D L+
Sbjct: 209 PMVADIIAIQNLYGTPTTIRAGNTVYGDGSTAGGYLDSLTSFSRPVAVTIYDNGGFDTLN 268
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ + IDL E SS+ G N+ IA+ TVIE+ +G SGND +IGN+ANN+
Sbjct: 269 FGTVSANQ-TIDLRAEHVSSVRGLTGNLIIARGTVIENAIGGSGNDTLIGNAANNIL--- 324
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
DG +G DT A ++ F + + A+ D L ++E + F+D
Sbjct: 325 ------DGGAGFDTAHIGASLAGTRVTVFFEGMTL--ASSQGNDVLVNIEMVAFSDTTRS 376
Query: 353 SVNVKQRSILE-YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ + + Y ASY DLI IG + + H+ F +EGR ITF+ Y+ S+ DL
Sbjct: 377 TASFGSSGSIYAYGASYADLITGIGGNALGLLNHYANFAAAEGRSITFNGLSYIASHVDL 436
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
G++ A HYI+HG EGR F L YIASH DLI A + G H+
Sbjct: 437 IQAHGANATIGALHYISHGYGEGRTIT-FDGLAYIASHADLIQAHGANATI---GALHYV 492
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
+ G EGR +F+ Y+ +Y DLR +G++ A HYI HG EGR F Y+
Sbjct: 493 SHGYGEGRTTSFNGLEYIAAYADLRAAYGTNGSIGAEHYINHGFGEGRGLR-FDTRLYLG 551
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAA 590
++ DL A+ + HF G EGRS F+ Y+ SY DL V+G++ + A
Sbjct: 552 AYADLRAAYGTD---INQAVTHFIQHGAAEGRSTDRFSALDYIASYGDLIAVYGTNTAGA 608
Query: 591 AQHYITHGMKEGRALGISGMQFKSVMN 617
QHY HG EGR G+++ +
Sbjct: 609 LQHYYAHGFTEGRGDNFDGLRYIASYA 635
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 8/185 (4%)
Query: 299 DGSSGLDTFF---YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+GS G + + + L R + D V + +
Sbjct: 523 NGSIGAEHYINHGFGEGRGLRFDTRLYLGAYADLRAAYGTDINQAVTHFI-QHGAAEGRS 581
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ S L+Y ASY DLI V G + +++H+Y G +EGR FD Y+ SY DL +
Sbjct: 582 TDRFSALDYIASYGDLIAVYGTNTAGALQHYYAHGFTEGRGDNFDGLRYIASYADLILAY 641
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIAS-HEDLINAFADAPDLVQVGKDHFSNFG 474
GSD H+I HG EGR+ A AS + DL+ + D H+ G
Sbjct: 642 GSDATQGTTHFIMHGFGEGRSTLFDAAAYINASGNADLLAVYGSNLD---GAVLHYVRHG 698
Query: 475 CEEGR 479
EGR
Sbjct: 699 YFEGR 703
>gi|222087758|ref|YP_002546295.1| metallopeptidase protein [Agrobacterium radiobacter K84]
gi|221725206|gb|ACM28362.1| metallopeptidase protein [Agrobacterium radiobacter K84]
Length = 640
Score = 343 bits (880), Expect = 5e-92, Method: Composition-based stats.
Identities = 162/661 (24%), Positives = 253/661 (38%), Gaps = 99/661 (14%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSF-----DITELNPNAQEVARWALG 60
P +T D L+ +YW++ + + S+ LN Q AL
Sbjct: 9 PWPSTSNDVDGLIYGRYWASSALDFSFTTSGAQYGSYSGEQLTFQPLNATMQAAVHSALA 68
Query: 61 EWSKVVDLTF-EETSIHSDIKFISS------NNGYVCTPRYDS-RYFMEINFDKADVWRY 112
++S + +LTF EETS+ + N+ Y P + +
Sbjct: 69 QYSSISNLTFMEETSVPGNATLRFGMSDEAQNSAYTYFPSESAQGGDVWFGTQSGLSAMT 128
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP---- 168
KG + LHEIGHALGL HP + V +DS +VMSY
Sbjct: 129 NPVKGNYAWISTLHEIGHALGLKHPHEF---SNTNFVTTSLAHDSMEFTVMSYRSYTGAS 185
Query: 169 -QDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK------------ 214
+ FG+ + M+ DI A+QK+YGA GN Y
Sbjct: 186 LYTGYTNEDFGFAQSLMMYDIAAIQKLYGADFSAHAGNTTYTFSSTTGEMFIDGVGQGKP 245
Query: 215 -DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE-----------KNMTI 262
D+ T++D GG D D + ++ I+L WS++ + N+
Sbjct: 246 GDNRVFLTVWDGGGVDTYDFSNYTSAQS-INLAPGGWSAMSRSQLAYLGDGHFAHGNVYN 304
Query: 263 A------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
A ++IE+ +G SG+D +IGN+ANN GND G +G+DT +
Sbjct: 305 ALQYNGDNRSLIENAIGGSGSDTIIGNAANNSLTGGGGNDWLSGGAGVDTAVFNFSLKQA 364
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI--DSVNVKQRSILEYTASYEDLIQV 374
+ + D L +E+L+F+D+ I D + + YT +++
Sbjct: 365 TVD--YGNRAMLLNGSEGHDSLVWIEKLQFSDRTIVQDDGSALVDDMFYYTHNHDVFDAG 422
Query: 375 IGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
++ +H+ G EG D FD+ YL Y D+ +HY G K
Sbjct: 423 A-----DADQHYSNVGWREGLDPNKFFDTSEYLAKYHDVAAA----GINPLQHYDQFGWK 473
Query: 433 EGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-----FDSY 486
EGR+P + F EY+ + D+ A D +H+ FG EGR V D
Sbjct: 474 EGRDPSSLFHTSEYLRLNPDVAAAKIDP-------LEHYLKFGIYEGRNVNAKDLLIDDT 526
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPD 545
Y + D+ +HY G EGR+P+ F Y+A++ D+ A
Sbjct: 527 FYFKNNPDVETAH----ADPEQHYNQFGWHEGRDPNPFFDTSGYLAAYHDVAAA------ 576
Query: 546 LVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
H+ +G+ EGR F+ YL D+ +HY+ G+ EGR
Sbjct: 577 -GVNPFTHYLQYGWHEGRDPSRNFDAAGYLKLNPDVAAA----GINPLEHYLEFGVFEGR 631
Query: 604 A 604
Sbjct: 632 T 632
>gi|296533245|ref|ZP_06895863.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296266431|gb|EFH12438.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 636
Score = 327 bits (839), Expect = 3e-87, Method: Composition-based stats.
Identities = 145/611 (23%), Positives = 228/611 (37%), Gaps = 85/611 (13%)
Query: 46 ELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF----------ISSNNGYVCTPRYD 95
N + + + +LTF E S+ F + + P
Sbjct: 54 AWNTYERAQLLQVFELYQAITNLTFTEVDTESEADFHLLLGDLPSLEGATPAAIFNPPVG 113
Query: 96 SRYFMEINFDKAD-VWRYGIG----KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV- 149
F+ W G +G +HEIGH LGL HP GG V+
Sbjct: 114 GELDGYGMFNIIPRAWSREPGGRLDQGGSAFQTLIHEIGHGLGLAHPHDDGGGSTVFPGV 173
Query: 150 -----DNDYENDSFLTSVMSYFMPQDSMMDA-----SFGYCATPMVSDIVAVQKIYGAPK 199
+++ + + ++MSY + D +G+ TPM DI +Q YGA
Sbjct: 174 EDSWETGEFDLNQGVWTMMSYVRGWATGPDGPPVLPEYGHSMTPMAFDIAVLQARYGANT 233
Query: 200 G-SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI--------DLNTESW 250
+ G++IY++ I+D+GGDD + + +
Sbjct: 234 TYATGDDIYELWDTDGPGTGYAAIWDAGGDDAIRYSGARDAVVDLRAATLEWAPGGGGFV 293
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + G TIA VIE + +GND + GN A+N+FF SGND+ DG G + +
Sbjct: 294 SYVSGVHGGYTIAHGVVIEVALLGAGNDRITGNDADNLFFGGSGNDMIDGGGGRNAAGFT 353
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI--DSVNVKQRSILEYTASY 368
+ ++ D E QD L ++ RL FAD I D + + Y +
Sbjct: 354 TSFTELASFGRYGNTVILDGPE-GQDTLVNIHRLMFADGTIELDRGSPLVDPLHYYFDNR 412
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + + +HF +G EGRD F YL D+ HY
Sbjct: 413 DVWLAG-----MNAEEHFASYGWREGRDPNFYFSVSSYLAVNQDVAAA----GLNPLEHY 463
Query: 427 ITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV---- 481
+ +G +EGR+P A F Y+A + D+ A + H+ +G E R
Sbjct: 464 LDYGWREGRDPSAWFDTDLYLARNPDVAAAGLNPLL-------HYLTYGQNEQRSSFQAL 516
Query: 482 ------TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHE 534
FD+ YL + D+ A +HY G +E R+P+ F Y+ +
Sbjct: 517 GKEIRDGFDAEFYLLANPDVARAGID----ARQHYEEFGWREERSPNGWFSTEYYLDMNP 572
Query: 535 DLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQ 592
D+ A P H+ G+ EGR + F YL + D+ +
Sbjct: 573 DVAAA-GINPL------AHYHTDGWREGRDPSPLFETGRYLANNPDVAAA----GIDPLE 621
Query: 593 HYITHGMKEGR 603
HY+ G+ EGR
Sbjct: 622 HYLRFGLAEGR 632
>gi|254501291|ref|ZP_05113442.1| Peptidase M10 serralysin C terminal domain family [Labrenzia
alexandrii DFL-11]
gi|222437362|gb|EEE44041.1| Peptidase M10 serralysin C terminal domain family [Labrenzia
alexandrii DFL-11]
Length = 506
Score = 287 bits (733), Expect = 5e-75, Method: Composition-based stats.
Identities = 139/471 (29%), Positives = 215/471 (45%), Gaps = 38/471 (8%)
Query: 9 TTERIADHLLRDQY-------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGE 61
+ I L R Y + F + P N ++AR AL
Sbjct: 34 SLNYIIGQLNRGDYSWGGIAVVTYSFAKVLPSYAKGLDEYDGFNSFNSQQMDMARLALET 93
Query: 62 WSKVVDLTFEETSI-------HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGI 114
WS V D+TF+E++ + + + P + S + ++ + +
Sbjct: 94 WSDVADITFQESNSYFAPIRFANSDTLADYSAAHAYLPGFSS-WAGDVWVNSDYAYNTSP 152
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYP--VYGVDNDYENDSFLTSVMSYFMPQDSM 172
G +HEIGHA+G HPG YN Y + Y DS S+MSY+ +
Sbjct: 153 EIGNYGYKVLVHEIGHAIGQPHPGDYNASGGKLSYQNNAAYAEDSAQYSIMSYWDESHTG 212
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ--------KDSPFIQTIY 223
D + TPM+ DI+A+Q YG + +Y +++ + +I+
Sbjct: 213 ADFGDAFAQTPMLHDILAIQAKYGVNMSTRTDDTVYGFNSNTESPIYDFSQNTAPVFSIW 272
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D+GG D +D + V I+LN +SS G N++IA VIE+ +G +G+DVVIGN
Sbjct: 273 DAGGIDTIDFSGY-FVDTVINLNEGGFSSAAGLTNNISIAYGAVIENAIGGAGDDVVIGN 331
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+N+ +G+DV F S Y F+N + ++H D L++VE
Sbjct: 332 QWDNLVDAGAGSDV---------FVLNQSSSSADTYVFDNGETIVF-SDHGTDRLTNVEI 381
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ +AD +D + Q SILEY ASYED+ + G D HF EFGL+EGR I F +
Sbjct: 382 IFYADAELDVIAQTQVSILEYAASYEDVEEAFGTDEEALFDHFVEFGLTEGRTIDFSALD 441
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
Y+ S++DL VFG+D A ARHYI G E R F + ++ ++ +L+
Sbjct: 442 YIASHEDLIEVFGADAEAGARHYIEFGRAENREIT-FDSAAFLEANPELVP 491
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 56/292 (19%), Positives = 99/292 (33%), Gaps = 36/292 (12%)
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD---QCIDSVNVKQRS 360
DT + + + IY F + ++ + F+ + ++N S
Sbjct: 244 DDTVYGFNSNTESPIYDFSQNTAPVFSIWD----AGGIDTIDFSGYFVDTVINLNEGGFS 299
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ + + D + +D+L +
Sbjct: 300 SAAGLTNNISIAYGAVIENAIGGAG--------------DDVVIGNQWDNLVDAGAGSDV 345
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ + E ++ + L V +++ +
Sbjct: 346 FVLNQS-----------SSSADTYVFDNGETIVFSDHGTDRLTNVEIIFYADAELDVIAQ 394
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
Y SY+D+ FG+D A H++ G+ EGR D F AL+YIASHEDLI F
Sbjct: 395 TQVSILEYAASYEDVEEAFGTDEEALFDHFVEFGLTEGRTID-FSALDYIASHEDLIEVF 453
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQ 592
+AG H+ FG E R ITF+ +L + +L + G + +AA
Sbjct: 454 GAD---AEAGARHYIEFGRAENREITFDSAAFLEANPELVPLQGQEINAAKM 502
>gi|209966645|ref|YP_002299560.1| Serralysin precursor, putative [Rhodospirillum centenum SW]
gi|209960111|gb|ACJ00748.1| Serralysin precursor, putative [Rhodospirillum centenum SW]
Length = 650
Score = 270 bits (689), Expect = 7e-70, Method: Composition-based stats.
Identities = 124/545 (22%), Positives = 187/545 (34%), Gaps = 100/545 (18%)
Query: 25 NYFIRYKPDVLTTHRL-----SFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDI 79
F+ P T + + L + R AL ++ +V + F E +
Sbjct: 120 YAFLTAVPADYDTLQDPDRPTAATFVTLTEAQRAATRLALAQYEEVSLIRFTEVTDEEAA 179
Query: 80 KFISSN-------NGYVCTPRYDSRYFMEINFDKADVWRYG------------IGKGTIL 120
+ GY P + R +I G GT
Sbjct: 180 LLRFGSHAMDGSLAGYAYYPSFAVRTSDDIITAATPSGIAGDSWLAASAANAAPTPGTDA 239
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF--- 177
+ +HE+GHALGL HP V DS +VMSY P +S + +
Sbjct: 240 FNTVIHELGHALGLKHPFEGVPSVSV-------AEDSVRYTVMSYTYPDNSEIWVEYPDR 292
Query: 178 -----GYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
T M+ DI+AVQ +YG G+ +Y + F +TI+D GG D +
Sbjct: 293 WGSALVSPRTLMLYDILAVQYLYGVNTATRAGDTVYSWQPN---ERFFETIWDGGGTDTV 349
Query: 232 DLTLIGGVKNYIDLNTESWSSI------------------------GGYEKNMTIAQHTV 267
D + IDL +SSI N+ IA V
Sbjct: 350 DASAQTLDC-VIDLRDGHFSSIAIRATEAQKRMDLPADADYLTTPTYDGRDNLAIAYGAV 408
Query: 268 IESVVGSSGNDVVIGNS---------ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
IE+ G +GND +IGN+ ++ +G+D DG SG+D A +
Sbjct: 409 IENARGGAGNDTLIGNAAANLLEGGAGDDRLSGGTGDDTIDGGSGVDVIRIEAARSAVTL 468
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCI------------DSVNVKQRSILEYTA 366
+ D S VE +RF DQ +
Sbjct: 469 EATGPWGVRLSGAATGTDVASGVELIRFDDQVVYVTLPVRFEAVQPDGGGAFDEAFYLAR 528
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRG-AAA 423
+ V V ++H+ FG +EGRD T FD YL + D+R + + +
Sbjct: 529 WADVRAAVNAGQVMSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRAAVEAGQVRSGY 588
Query: 424 RHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
HY+ G +E R+P A F Y+ + D+ +A D H+ +G E R T
Sbjct: 589 EHYLNSGWREDRDPSAWFDLSAYLQRNPDVADAGIDP-------LRHWLVWGIGENRIAT 641
Query: 483 FDSYL 487
Sbjct: 642 AADTG 646
Score = 106 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/333 (16%), Positives = 98/333 (29%), Gaps = 35/333 (10%)
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----DANEHKQDFLSDVERLR---FADQ 349
G DT A + I + + + D +D + L + +
Sbjct: 339 TIWDGGGTDTVDASAQTLDCVIDLRDGHFSSIAIRATEAQKRMDLPADADYLTTPTYDGR 398
Query: 350 CIDSVNVK-QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
++ A + LI ++ E G D GS
Sbjct: 399 DNLAIAYGAVIENARGGAGNDTLIGNAAANLLEGGAGDDRLSGGTGDDTI-----DGGSG 453
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY--IASHEDLINAFADAPDLVQVG 466
D+ + + GV+ + +D + V
Sbjct: 454 VDVIRIEAARSAVTLEATGPWGVRLSGAATGTDVASGVELIRFDDQVVYVTLPVRFEAVQ 513
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA-F 524
D FD YL + D+R + + + HY+ G EGR+P F
Sbjct: 514 PDGGGA----------FDEAFYLARWADVRAAVNAGQVMSGLEHYLAFGQAEGRDPTPLF 563
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNV 582
Y+A D+ A V++G +H+ N G+ E R + F+ YL D+ +
Sbjct: 564 DEEAYLARWADVRAAV--EAGQVRSGYEHYLNSGWREDRDPSAWFDLSAYLQRNPDVADA 621
Query: 583 FGSDRSAAAQHYITHGMKEGRALGISGMQFKSV 615
+H++ G+ E R +
Sbjct: 622 ----GIDPLRHWLVWGIGENRIATAADTGLWLA 650
>gi|288958036|ref|YP_003448377.1| secreted protease [Azospirillum sp. B510]
gi|288910344|dbj|BAI71833.1| secreted protease [Azospirillum sp. B510]
Length = 526
Score = 265 bits (677), Expect = 2e-68, Method: Composition-based stats.
Identities = 147/513 (28%), Positives = 222/513 (43%), Gaps = 40/513 (7%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFIS 83
+ F+ V + F +N + R AL WS V +++F E S + +
Sbjct: 40 TYGFLSSSRQVSSGDATGF--AAMNTAQRTAVRQALAAWSAVANISFVEISDAASAEIAF 97
Query: 84 SNN-------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
N Y P S ++ G+ +HEIGHALGL H
Sbjct: 98 GTNRQSGRSAAYAYYPSTGS-QGGQVFLANDSAGNTNPTTGSYSYMTVIHEIGHALGLKH 156
Query: 137 PGSYN--GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
PG+Y+ G G D++ S+MSY + S GY P + DI A+Q +
Sbjct: 157 PGNYDAGSGSGTEGPYLPAATDNYAYSIMSYNA---NSRLPSGGYLTGPSLYDIAAIQYL 213
Query: 195 YGAPKGSL-GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
YGA + G+ Y + T++D G + L+ + + +DL +SS
Sbjct: 214 YGANMSAAPGDTSYTLNTAS-----FTTLWDPNGRNSLNGSAQTTSLS-LDLRGGQFSSA 267
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
GG + +A T I++ G SGND N+ DV DG +G DT +
Sbjct: 268 GGTT-FLALAYGTRIQAATGGSGNDTFTVNTLG---------DVLDGGAGTDTVVFSGSR 317
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC--IDSVNVKQRSILEYTASYEDL 371
Y++ +F+ + + + L+++E LRF+D + S + L Y AS DL
Sbjct: 318 AQYRVQQFDGSRYIV-SGADGNALLTNIEFLRFSDGTTALSSASSGSFDALRYIASSADL 376
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
I +G + +H GL EGR +T FD Y Y+ Y DL N FG+D AA H+I +G
Sbjct: 377 IGALGANAAAGTQHLISSGLYEGRSLTGFDPYNYIAGYVDLMNAFGADTTAATSHFIAYG 436
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR-FVTFDSYLYL 489
+EGR F L Y AS+ DLI AF + + + H+ G EGR F++ YL
Sbjct: 437 YREGRGSTLFDTLSYEASNPDLIVAFGNN---REAVELHYIVSGRFEGRSLTRFNAAAYL 493
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
+ D+ G A +HY++ G EGR
Sbjct: 494 AANPDVNAAVGGSLAGARQHYVSSGFAEGRALG 526
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 82/250 (32%), Gaps = 16/250 (6%)
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV--FGSD 418
++Y + F GR+ S DLR +
Sbjct: 209 AIQYLYGANMSAAPGDTSYTLNTASFTTLWDPNGRNSLNGSAQTTSLSLDLRGGQFSSAG 268
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
++ + L + + +
Sbjct: 269 GTTFLALAYGTRIQAATGGSGNDTFTVNTLGDVLDGGAGTDTVVFSGSRAQY-------- 320
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
R FD Y+ S D N ++ T + + +F AL YIAS DLI
Sbjct: 321 RVQQFDGSRYIVSGAD-GNALLTNIEFLRFSDGTTALSSA-SSGSFDALRYIASSADLIG 378
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
A AG H + G EGRS+T F+P Y+ Y DL N FG+D +AA H+I +
Sbjct: 379 AL---GANAAAGTQHLISSGLYEGRSLTGFDPYNYIAGYVDLMNAFGADTTAATSHFIAY 435
Query: 598 GMKEGRALGI 607
G +EGR +
Sbjct: 436 GYREGRGSTL 445
>gi|300724813|ref|YP_003714138.1| Secreted alkaline metalloproteinase [Xenorhabdus nematophila ATCC
19061]
gi|297631355|emb|CBJ92050.1| Secreted alkaline metalloproteinase [Xenorhabdus nematophila ATCC
19061]
gi|310894056|gb|ADP37931.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894060|gb|ADP37933.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894062|gb|ADP37934.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894064|gb|ADP37935.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894066|gb|ADP37936.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894068|gb|ADP37937.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894070|gb|ADP37938.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894072|gb|ADP37939.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894074|gb|ADP37940.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894076|gb|ADP37941.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
Length = 478
Score = 245 bits (625), Expect = 2e-62, Method: Composition-based stats.
Identities = 95/408 (23%), Positives = 166/408 (40%), Gaps = 39/408 (9%)
Query: 10 TERIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVA 55
+ D L+R Y S +F++ D L + N ++ A
Sbjct: 44 ADEAPDELVRGHYKWANKYVNSSGTLELSYHFLKSASDPLMRIFKVSGFSAFNEEQKDAA 103
Query: 56 RWALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYDSRYFMEINFDKA 107
+ +L WS V ++ F E S + + P+ + N
Sbjct: 104 KLSLQSWSDVANIKFTEVSSIYKANITFGFFDKSVNKDYAFANLPQGQKMVYTWYNAKSH 163
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMS 164
I + HEIGH LGL HP Y+ P Y +Y D +VMS
Sbjct: 164 TFVDNDIDVNGYIRQTFTHEIGHTLGLEHPADYDASDEIRPNYINSAEYFEDCRAYTVMS 223
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK--------- 214
YF + + D +GY + P+++DI A+Q++YGA + G+ +Y
Sbjct: 224 YFSEKFTGQDFKYGYSSAPLLNDISAIQELYGANMETRKGDTVYGFNSNTDRDFMTATDA 283
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+S I +++D+GG+D D + + I+LN S+S +GG + N++IA+ VIE+ +G
Sbjct: 284 NSKLIFSVWDAGGEDTFDFSGFTQNQ-RINLNAGSFSDVGGLKGNVSIARGVVIENAIGG 342
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SG+D+++GNSA+N+ +G+D+ G G D + + + +
Sbjct: 343 SGDDILVGNSADNILKGGAGDDIIYGGLGGDHL--WGGEGNDIFVYLSGKESLKNNPDWI 400
Query: 335 QDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
DF+S +++ +D ++K A DV +
Sbjct: 401 HDFVSGEDKIDLSDFNFGGDGDIKFVDSFSGKAGEVLFTYDEENDVTD 448
>gi|60265600|gb|AAX15945.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
gi|310894058|gb|ADP37932.1| secreted alkaline metalloprotease [Xenorhabdus nematophila]
Length = 478
Score = 245 bits (625), Expect = 2e-62, Method: Composition-based stats.
Identities = 95/408 (23%), Positives = 165/408 (40%), Gaps = 39/408 (9%)
Query: 10 TERIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVA 55
+ D L+R Y S +F++ D L + N ++ A
Sbjct: 44 ADEAPDELVRGHYKWANKYVNSSGTLELSYHFLKSASDPLMRIFKVSGFSAFNEEQKDAA 103
Query: 56 RWALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYDSRYFMEINFDKA 107
+ +L WS V ++ F E S + + P+ + N
Sbjct: 104 KLSLQSWSDVANIKFTEVSSIYKANITFGFFDKSVNKDYAFANLPQGQKMVYTWYNAKSH 163
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMS 164
I + HEIGH LGL HP Y+ P Y +Y D +VMS
Sbjct: 164 TFVDNDIDVNGYIRQTFTHEIGHTLGLEHPADYDASDEIRPNYINSAEYFEDCRAYTVMS 223
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK--------- 214
YF + + D +GY + P+++DI A+Q++YGA + G+ +Y
Sbjct: 224 YFSEKFTGQDFKYGYSSAPLLNDISAIQELYGANMETRKGDTVYGFNSNTDRDFMTATDA 283
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+S I +++D+GG+D D + + I+LN S+S +GG + N++IA+ VIE+ +G
Sbjct: 284 NSKLIFSVWDAGGEDTFDFSGFTQNQ-RINLNAGSFSDVGGLKGNVSIARGVVIENAIGG 342
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SG+D+++GNSA+N+ G+D+ G G D + + + +
Sbjct: 343 SGDDILVGNSADNILKGGVGDDIIYGGLGGDHL--WGGEGNDIFVYLSGKESLKNNPDWI 400
Query: 335 QDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
DF+S +++ +D ++K A DV +
Sbjct: 401 HDFVSGEDKIDLSDFNFGGDGDIKFVDSFSGKAGEVLFTYDEENDVTD 448
>gi|307131038|ref|YP_003883054.1| secreted protease C [Dickeya dadantii 3937]
gi|306528567|gb|ADM98497.1| Secreted protease C precursor [Dickeya dadantii 3937]
Length = 479
Score = 242 bits (618), Expect = 1e-61, Method: Composition-based stats.
Identities = 100/417 (23%), Positives = 166/417 (39%), Gaps = 38/417 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N K Y+ ++ A + R+ + + + +K + S D + N
Sbjct: 43 NGKTSYSVDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 102
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
E A+ +L WS V +LTF E + + N Y P + +
Sbjct: 103 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYP-GNYQGA 161
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
++ G HEIGHALGL HPG YN G D Y DS+
Sbjct: 162 GSSWYNYNQSNIRNPGSEEYGRQTFTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAEDSY 221
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+MSY+ ++ D + Y PM+ DI A+Q++YGA G+++Y
Sbjct: 222 QFSIMSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDRDF 281
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG+D D + + I+LN S+S +GG + N++IA I
Sbjct: 282 YTATDSSKALIFSVWDAGGNDTFDFSGYSNNQ-RINLNEGSFSDVGGLKGNVSIAHGVTI 340
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND+++GNSA+N+ +GNDV G +G DT + +
Sbjct: 341 ENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY--GGAGRDTFVYGSGQDSTV 398
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF ++++ + + + L + H
Sbjct: 399 AAYDWIADFQKGIDKIDLSAFRNEGQLSFVQDQFTGKGQEVMLQWDAANSITNLWLH 455
>gi|131066|sp|P16317|PRTC_ERWCH RecName: Full=Secreted protease C; Short=ProC; Flags: Precursor
gi|24987447|pdb|1K7G|A Chain A, Prtc From Erwinia Chrysanthemi
gi|148488|gb|AAA63638.1| neutral protease large subunit [Erwinia chrysanthemi]
gi|148492|gb|AAA24860.1| metalloprotease C [Erwinia chrysanthemi]
Length = 479
Score = 242 bits (618), Expect = 1e-61, Method: Composition-based stats.
Identities = 100/417 (23%), Positives = 165/417 (39%), Gaps = 38/417 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N K Y+ ++ A + R+ + + + +K + S D + N
Sbjct: 43 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 102
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
E A+ +L WS V +LTF E + + N Y P + +
Sbjct: 103 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYP-GNYQGA 161
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
++ G HEIGHALGL HPG YN G D Y DS+
Sbjct: 162 GSSWYNYNQSNIRNPGSEEYGRQTFTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAEDSY 221
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+MSY+ ++ D + Y PM+ DI A+Q++YGA G+++Y
Sbjct: 222 QFSIMSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDRDF 281
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG D D + + I+LN S+S +GG + N++IA I
Sbjct: 282 YTATDSSKALIFSVWDAGGTDTFDFSGYSNNQ-RINLNEGSFSDVGGLKGNVSIAHGVTI 340
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND+++GNSA+N+ +GNDV G +G DT + +
Sbjct: 341 ENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY--GGAGRDTFVYGSGQDSTV 398
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF ++++ + + + L + H
Sbjct: 399 AAYDWIADFQKGIDKIDLSAFRNEGQLSFVQDQFTGKGQEVMLQWDAANSITNLWLH 455
>gi|47241|emb|CAA39139.1| metalloprotease [Serratia marcescens]
gi|227601|prf||1707277A metalloprotease
Length = 504
Score = 241 bits (616), Expect = 2e-61, Method: Composition-based stats.
Identities = 100/421 (23%), Positives = 165/421 (39%), Gaps = 45/421 (10%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++ E+ + R+ Q W+ Y + + T +++ +
Sbjct: 58 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 117
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L W+ V ++TF E + N Y P
Sbjct: 118 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIWQ 177
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 178 GQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYNDVTY 237
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 238 AEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANPSTRTGDTVYGFNSN 297
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 298 TGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 356
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ANNV +GNDV G G D + +
Sbjct: 357 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGAD--ELWGGAGKDIFVFSAA 414
Query: 324 AIIVYDANEHKQDFLSDVERL---RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ A++ +DF ++++ F + S + TA L +V
Sbjct: 415 SDSAPGASDWIRDFQKGIDKIDLSFFNKEANSSDFIHFVDHFSGTAGEALLSYNASSNVT 474
Query: 381 E 381
+
Sbjct: 475 D 475
>gi|253988086|ref|YP_003039442.1| hypothetical protein PAU_00605 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253779536|emb|CAQ82697.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 484
Score = 241 bits (615), Expect = 3e-61, Method: Composition-based stats.
Identities = 101/405 (24%), Positives = 159/405 (39%), Gaps = 56/405 (13%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y F+ KPD + H + + N + A+
Sbjct: 50 DAAKELIRGDYRWGHQDDDKSKAFQLKYNFLESKPDDMPWHI--SEFSAFNEEQKAAAKL 107
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYD-SRYFMEINFDKAD 108
++ W+ V ++ F ETS + + + PR + ++ N
Sbjct: 108 SIQSWADVANINFVETSDVKEANITFGFFDVSLTGSYAFAYLPRPEKTQLGTWYNAKSRT 167
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
I HEIGH LGL HP YN P Y Y DS +VMSY
Sbjct: 168 FTNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSY 227
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK---------D 215
F +++ D Y + P+++DI A+Q++YGA + IY + +
Sbjct: 228 FSEKNTGQDFKGIYSSAPLLNDISAIQEVYGANNTTRTDDTIYGFNSNTERDFYTAKDEN 287
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + N++IA+ IE+ +G S
Sbjct: 288 SKLLFTAWDAGGNDTFDFSGFTQDQ-RINLNEASFSDVGGLKGNVSIARGVTIENAIGGS 346
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGL---------DTFFYYAPSYLYKIYRFENAII 326
GNDV+IGN A+N +G+D+ G G DTF Y + + + I
Sbjct: 347 GNDVLIGNDADNTLKGGAGDDIIYGGLGADNLWGGEGKDTFVYLSAKESPPLE--RDWIH 404
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + E K D F + VK L
Sbjct: 405 DFVSGEDKIDVS------LFDLGELGKGGVKFVEEFTGAVGEAVL 443
>gi|271500594|ref|YP_003333619.1| Serralysin [Dickeya dadantii Ech586]
gi|270344149|gb|ACZ76914.1| Serralysin [Dickeya dadantii Ech586]
Length = 480
Score = 241 bits (614), Expect = 4e-61, Method: Composition-based stats.
Identities = 100/418 (23%), Positives = 160/418 (38%), Gaps = 39/418 (9%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVLTTHRLSFD--ITELNPNAQ 52
N K Y+ ++ + R+ W+ + +K + + D + N
Sbjct: 43 NDKASYSVDQAVSQITRENTTWNGSNILGKSASLTFKFLQSASSTPAGDTGFVKFNAEQI 102
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
A+ AL W+ V +LTF E + + N Y P +
Sbjct: 103 AQAKLALQSWADVANLTFTEVTGNKSANITFGNYTRDASGNLDYDTQAYAYYP-GQYQGA 161
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN--GGYPVYGVDNDYENDS 157
++ G HEIGHALGL HP YN G Y Y DS
Sbjct: 162 GSSWYNYNQSNIRSPGTEDYGRQTLTHEIGHALGLSHPAEYNAGEGDISYKNSAAYAEDS 221
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ--- 213
S+MSY+ +D+ D Y A P++ DI A+QK+YGA G+ +Y
Sbjct: 222 RQFSIMSYWDVEDTGGDFRGHYSAGPLMDDIAAIQKLYGANMTTRTGDTVYGFHSNTDRD 281
Query: 214 ------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
I +++D+GG+D D + + I+LN ++S +GG + N++IA
Sbjct: 282 FYTATDSSKALIFSVWDAGGNDTFDFSGYSNNQ-RINLNEGAFSDVGGLKGNVSIAHGVT 340
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+ +G SGND+++GNSA+N+ +GNDV G +G DT +
Sbjct: 341 IENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTL--TGGAGRDTFVYGSGQDST 398
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF + V+++ + + L V H
Sbjct: 399 VSAYDWITDFQTGVDKIDLSAFHNQGQLSFAQDQFSGKGQEIILQWDAADSVTNLWLH 456
>gi|24987448|pdb|1K7I|A Chain A, Prtc From Erwinia Chrysanthemi: Y228f Mutant
Length = 479
Score = 240 bits (613), Expect = 4e-61, Method: Composition-based stats.
Identities = 99/417 (23%), Positives = 165/417 (39%), Gaps = 38/417 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N K Y+ ++ A + R+ + + + +K + S D + N
Sbjct: 43 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 102
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
E A+ +L WS V +LTF E + + N Y P + +
Sbjct: 103 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYP-GNYQGA 161
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
++ G HEIGHALGL HPG YN G D Y DS+
Sbjct: 162 GSSWYNYNQSNIRNPGSEEYGRQTFTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAEDSY 221
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+MS++ ++ D + Y PM+ DI A+Q++YGA G+++Y
Sbjct: 222 QFSIMSFWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDRDF 281
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG D D + + I+LN S+S +GG + N++IA I
Sbjct: 282 YTATDSSKALIFSVWDAGGTDTFDFSGYSNNQ-RINLNEGSFSDVGGLKGNVSIAHGVTI 340
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND+++GNSA+N+ +GNDV G +G DT + +
Sbjct: 341 ENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY--GGAGRDTFVYGSGQDSTV 398
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF ++++ + + + L + H
Sbjct: 399 AAYDWIADFQKGIDKIDLSAFRNEGQLSFVQDQFTGKGQEVMLQWDAANSITNLWLH 455
>gi|60461914|gb|AAX21094.1| ProA [Serratia proteamaculans]
Length = 504
Score = 240 bits (612), Expect = 5e-61, Method: Composition-based stats.
Identities = 100/421 (23%), Positives = 162/421 (38%), Gaps = 45/421 (10%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++TE+ + R+ Q W+ Y + + T +++ +
Sbjct: 58 NGKDSFSTEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 117
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L WS V ++TF E N Y P
Sbjct: 118 QQQQAKLSLQSWSDVANITFTEVGAGQKANITFGNYSQDRPGHYDYDTQAYAFLPNTIYQ 177
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 178 GQNLGGQTWYNVNQSNVKHPASEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDASY 237
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 238 AEDTREFSLMSYWSETNTGGDNGGHYAAAPLLDDISAIQHLYGANQTTRTGDTVYGFNSN 297
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 298 TGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 356
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ANNV +GNDV G G D + +
Sbjct: 357 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGAD--ELWGGAGKDTFVFSAV 414
Query: 324 AIIVYDANEHKQDFLSDVERL---RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ A++ +DF ++++ F + A L +V
Sbjct: 415 SDSAPGASDWIKDFQKGIDKIDLSFFNQGAQGGDQIHFVDHFSGAAGEALLSYNASNNVS 474
Query: 381 E 381
+
Sbjct: 475 D 475
>gi|24987449|pdb|1K7Q|A Chain A, Prtc From Erwinia Chrysanthemi: E189a Mutant
Length = 479
Score = 240 bits (612), Expect = 6e-61, Method: Composition-based stats.
Identities = 99/417 (23%), Positives = 164/417 (39%), Gaps = 38/417 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N K Y+ ++ A + R+ + + + +K + S D + N
Sbjct: 43 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 102
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
E A+ +L WS V +LTF E + + N Y P + +
Sbjct: 103 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYP-GNYQGA 161
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
++ G H IGHALGL HPG YN G D Y DS+
Sbjct: 162 GSSWYNYNQSNIRNPGSEEYGRQTFTHAIGHALGLAHPGEYNAGEGDPSYNDAVYAEDSY 221
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+MSY+ ++ D + Y PM+ DI A+Q++YGA G+++Y
Sbjct: 222 QFSIMSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDRDF 281
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG D D + + I+LN S+S +GG + N++IA I
Sbjct: 282 YTATDSSKALIFSVWDAGGTDTFDFSGYSNNQ-RINLNEGSFSDVGGLKGNVSIAHGVTI 340
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND+++GNSA+N+ +GNDV G +G DT + +
Sbjct: 341 ENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY--GGAGRDTFVYGSGQDSTV 398
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF ++++ + + + L + H
Sbjct: 399 AAYDWIADFQKGIDKIDLSAFRNEGQLSFVQDQFTGKGQEVMLQWDAANSITNLWLH 455
>gi|62754165|gb|AAX99100.1| secreted alkaline metalloprotease [Photorhabdus temperata subsp.
khanii NC19]
Length = 483
Score = 240 bits (611), Expect = 7e-61, Method: Composition-based stats.
Identities = 88/342 (25%), Positives = 144/342 (42%), Gaps = 39/342 (11%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y + F+ +PD + H F + N + A+
Sbjct: 49 NAAKELIRGDYRWGHQGDDKSETFQLTYSFLESEPDNMPWHIAGF--SAFNEEQKAAAKL 106
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYDSRY-FMEINFDKAD 108
++ W+ V ++ F ET+ + + P +S+ N
Sbjct: 107 SIQSWTDVANINFTETTDSDKAHITFGFFDVSLRGSYAFAYLPSPESKQSGTWYNLKSHT 166
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
IG HEIGH LGL HP YN P Y Y DS +VMSY
Sbjct: 167 FSENDIGVNGYGRQTFTHEIGHTLGLEHPADYNASDKERPTYKKSATYFEDSRAYTVMSY 226
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---------KD 215
F +++ D Y + P+++DI A+Q++YGA + +Y ++
Sbjct: 227 FGEKNTGQDFKGIYSSAPLLNDISAIQEVYGANNTTRTDDTVYGFNSNTDRDFFTAKDEN 286
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + N++IA+ IE+ +G S
Sbjct: 287 SKLLFTAWDAGGNDTFDFSGFTQDQ-RINLNEASFSDVGGLKGNVSIARGVTIENAIGGS 345
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
GND++IGN A N+ +G+D+ G G D + +
Sbjct: 346 GNDILIGNDAENILKGGAGDDIIYGGLGADQLWGGEGKDTFV 387
>gi|271500595|ref|YP_003333620.1| Serralysin [Dickeya dadantii Ech586]
gi|270344150|gb|ACZ76915.1| Serralysin [Dickeya dadantii Ech586]
Length = 478
Score = 239 bits (610), Expect = 9e-61, Method: Composition-based stats.
Identities = 101/425 (23%), Positives = 163/425 (38%), Gaps = 39/425 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N KP Y+ E + RD + + + +K D + N
Sbjct: 42 NGKPSYSLEEAGAQITRDNVSWNGANVFGKSANLTFKFLQSARATPDGDTGFVKFNAAQI 101
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
A+ AL W+ V ++TF E + + N Y P S
Sbjct: 102 SQAKLALQSWADVANITFTEVTGNQSANVTFGNYTRDSSGRLDYGSQAYAYLPGSGSAS- 160
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
++ HEIGHALGL HPG YN G D Y D+
Sbjct: 161 GSTWYNYNVDNIRSPDTMEYGRQTLTHEIGHALGLNHPGDYNAGVGNPSYSDVTYAEDTR 220
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+MSY+ +++ D Y A PM+ DI A+Q++YGA G+ IY
Sbjct: 221 QFSIMSYWSEKNTGGDFKGHYAAGPMLDDIEAIQRLYGANMSTRTGDTIYGFHSNTDRDF 280
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG+D D + + I+LN ++S +GG + N++IA I
Sbjct: 281 YTATSSSKALIFSVWDAGGNDTFDFSGYSNNQ-RINLNEGAFSDVGGLKGNISIAHGVTI 339
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND++IGN ANN +G+D+ G G D + S +
Sbjct: 340 ENAIGGSGNDLLIGNDANNTLQGGAGDDILYGGGGADRLY--GGSGKDTFVYTAVSDSSV 397
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+A + DF + V+++ + N+ + + L +V +
Sbjct: 398 NAPDWILDFQTGVDKIDLSAFNTGH-NLHFVNQFSGSGGEIMLNWDASSNVSNLYLNLDN 456
Query: 389 FGLSE 393
+E
Sbjct: 457 NTSAE 461
>gi|218198433|gb|EEC80860.1| hypothetical protein OsI_23479 [Oryza sativa Indica Group]
Length = 487
Score = 237 bits (605), Expect = 4e-60, Method: Composition-based stats.
Identities = 99/419 (23%), Positives = 163/419 (38%), Gaps = 54/419 (12%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++ E+ + R+ Q W+ Y + + T +++ +
Sbjct: 41 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L W+ V ++TF E + N Y P
Sbjct: 101 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIWQ 160
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 161 GQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDVTY 220
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 221 AEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNSN 280
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I ++D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 281 TGRDFLSTTSNAQKLIFAVWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 339
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ANNV +GNDV G G D + +
Sbjct: 340 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGAD--ELWGGAGKDIFVFSAA 397
Query: 324 AIIVYDANEHKQDFLSDVERL------------RFADQCIDSVNVKQRSILEYTASYED 370
+ A++ +DF ++++ F ++L Y AS
Sbjct: 398 SDSAPGASDWIRDFQKGIDKIDLSFFNKEAQSSDFIHFVDHFSGAAGEALLSYNASNNV 456
>gi|199583196|gb|ACH90152.1| insecticidal protein [Serratia marcescens]
Length = 487
Score = 237 bits (605), Expect = 4e-60, Method: Composition-based stats.
Identities = 94/384 (24%), Positives = 156/384 (40%), Gaps = 42/384 (10%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++ E+ + R+ Q W+ Y + + T +++ +
Sbjct: 41 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L W+ V ++TF E + N Y P
Sbjct: 101 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIWQ 160
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 161 GQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDVTY 220
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 221 AEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNSN 280
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 281 TGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 339
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ANNV +GNDV G G D + +
Sbjct: 340 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGAD--ELWGGAGKDIFVFSAA 397
Query: 324 AIIVYDANEHKQDFLSDVERLRFA 347
+ A++ +DF ++++ +
Sbjct: 398 SDSAPGASDWIRDFQKGIDKIDLS 421
>gi|77458903|ref|YP_348409.1| epralysin. metallo peptidase. MEROPS family M10B [Pseudomonas
fluorescens Pf0-1]
gi|77382906|gb|ABA74419.1| metalloprotease [Pseudomonas fluorescens Pf0-1]
Length = 486
Score = 237 bits (605), Expect = 4e-60, Method: Composition-based stats.
Identities = 98/418 (23%), Positives = 161/418 (38%), Gaps = 41/418 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ A LLRD + F+ ++ +
Sbjct: 49 NGKPSFSVDQAATQLLRDGAAYQDKDGSGKIELTYTFLTSASSSTMYKHGISGFSQFSTQ 108
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 109 QKAQAVLAMQSWADVANVTFTEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 168
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + HEIGH LGL HPG YN G D Y D+
Sbjct: 169 WYLINSGYTQNKNPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 228
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 229 YSVMSYWSESNTSQNFSKGGVEAYSSGPLMDDIAAIQKLYGANLTTRTGDTTYGFNSNAG 288
Query: 213 -------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D+GG D D + + I+LN S+S +GG N++IA+
Sbjct: 289 RDFLSASSSADKLVFSVWDAGGKDTFDFSGFTQNQK-INLNEASFSDVGGLVGNVSIAKG 347
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +G SGND++IGNSA N +GND+ G+ G D + + ++
Sbjct: 348 VTIENAIGGSGNDLLIGNSAANELKGGAGNDIIWGAGGADKL--WGGAGSDTFVFAASSD 405
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
A + DF+S ++++ + + S A L G +
Sbjct: 406 SKPGAIDQILDFVSGLDKIDLTGIT-NGAGLHFVSAFTGAAGDAVLTSSGGNSLLSVD 462
>gi|47240|emb|CAA39138.1| metalloprotease [Serratia marcescens]
Length = 493
Score = 237 bits (605), Expect = 4e-60, Method: Composition-based stats.
Identities = 100/421 (23%), Positives = 165/421 (39%), Gaps = 45/421 (10%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++ E+ + R+ Q W+ Y + + T +++ +
Sbjct: 47 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 106
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L W+ V ++TF E + N Y P
Sbjct: 107 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIWQ 166
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 167 GQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYNDVTY 226
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 227 AEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANPSTRTGDTVYGFNSN 286
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 287 TGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 345
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ANNV +GNDV G G D + +
Sbjct: 346 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGAD--ELWGGAGKDIFVFSAA 403
Query: 324 AIIVYDANEHKQDFLSDVERL---RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ A++ +DF ++++ F + S + TA L +V
Sbjct: 404 SDSAPGASDWIRDFQKGIDKIDLSFFNKEANSSDFIHFVDHFSGTAGEALLSYNASSNVT 463
Query: 381 E 381
+
Sbjct: 464 D 464
>gi|62754189|gb|AAX99112.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 237 bits (604), Expect = 5e-60, Method: Composition-based stats.
Identities = 90/349 (25%), Positives = 143/349 (40%), Gaps = 48/349 (13%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y F+ KPD + H + + N + A+
Sbjct: 50 DAAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKL 107
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYD-SRYFMEINFDKAD 108
++ W+ V ++ F ET+ + + + P + ++ N
Sbjct: 108 SIQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRT 167
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
I HEIGH LGL HP YN P Y Y DS +VMSY
Sbjct: 168 FLNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSY 227
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ---------KD 215
F +++ D Y + P+++DI A+Q +YGA + +Y ++
Sbjct: 228 FGEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDEN 287
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + N++IA+ IE+ +G S
Sbjct: 288 SKLLFTAWDTGGNDTFDFSGFTQDQ-RINLNEASFSDVGGLKGNVSIARGVTIENAIGGS 346
Query: 276 GNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYL 315
GNDV+IGN A N +G+D+ G G DTF Y +
Sbjct: 347 GNDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKES 395
>gi|307131037|ref|YP_003883053.1| secreted protease A [Dickeya dadantii 3937]
gi|306528566|gb|ADM98496.1| Secreted protease A precursor [Dickeya dadantii 3937]
Length = 477
Score = 237 bits (604), Expect = 5e-60, Method: Composition-based stats.
Identities = 96/379 (25%), Positives = 155/379 (40%), Gaps = 38/379 (10%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N KP Y+ E + + RD + + + +K D + N
Sbjct: 41 NGKPSYSIEDAGEQITRDNVSWNGSNVFGKSANLTFKFLQSARSTPDGDTGFVKFNAAQV 100
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
A+ AL W+ + ++TF E + + N Y P S
Sbjct: 101 AQAKLALQSWADLANITFTEVTGNQSANVTFGNYTRDSSGRLDYGTQAYAYLPGSGSASG 160
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
++ K HEIGHALGL HPG YN G D Y D+
Sbjct: 161 TT-WYNYNVDNIRSPDKMEYGRQTLTHEIGHALGLNHPGDYNAGEGNPTYSDVTYAEDTR 219
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+MSY+ +++ D Y A PM+ DI A+Q++YGA G+ +Y
Sbjct: 220 QFSIMSYWSEKNTGGDFKGHYAAGPMLDDIDAIQRLYGANMTTRTGDTVYGFNSNTDRDF 279
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG+D D + + I+LN S S +GG + N++IA I
Sbjct: 280 YTATSSSKALIFSVWDAGGNDTFDFSGYSNNQ-RINLNEGSLSDVGGLKGNVSIAHGVTI 338
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND++IGN+A+N+ +G+D+ G G D + S +
Sbjct: 339 ENAIGGSGNDLLIGNNADNILRGGAGDDILYGGGGADRLY--GGSGRDTFVYTAVSDSKV 396
Query: 329 DANEHKQDFLSDVERLRFA 347
A + DF + V+++ +
Sbjct: 397 AAPDWILDFQTGVDKIDLS 415
>gi|24987255|pdb|1GO8|P Chain P, The Metzincin's Methionine: Prtc M226l Mutant
Length = 462
Score = 237 bits (604), Expect = 5e-60, Method: Composition-based stats.
Identities = 99/417 (23%), Positives = 165/417 (39%), Gaps = 38/417 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N K Y+ ++ A + R+ + + + +K + S D + N
Sbjct: 26 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 85
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
E A+ +L WS V +LTF E + + N Y P + +
Sbjct: 86 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYP-GNYQGA 144
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
++ G HEIGHALGL HPG YN G D Y DS+
Sbjct: 145 GSSWYNYNQSNIRNPGSEEYGRQTFTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAEDSY 204
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S++SY+ ++ D + Y PM+ DI A+Q++YGA G+++Y
Sbjct: 205 QFSILSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDRDF 264
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG D D + + I+LN S+S +GG + N++IA I
Sbjct: 265 YTATDSSKALIFSVWDAGGTDTFDFSGYSNNQ-RINLNEGSFSDVGGLKGNVSIAHGVTI 323
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND+++GNSA+N+ +GNDV G +G DT + +
Sbjct: 324 ENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY--GGAGRDTFVYGSGQDSTV 381
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF ++++ + + + L + H
Sbjct: 382 AAYDWIADFQKGIDKIDLSAFRNEGQLSFVQDQFTGKGQEVMLQWDAANSITNLWLH 438
>gi|62754177|gb|AAX99106.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 236 bits (603), Expect = 6e-60, Method: Composition-based stats.
Identities = 90/349 (25%), Positives = 143/349 (40%), Gaps = 48/349 (13%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y F+ KPD + H + + N + A+
Sbjct: 50 DAAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKL 107
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYD-SRYFMEINFDKAD 108
++ W+ V ++ F ET+ + + + P + ++ N
Sbjct: 108 SIQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRT 167
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
I HEIGH LGL HP YN P Y Y DS +VMSY
Sbjct: 168 FLNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSY 227
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ---------KD 215
F +++ D Y + P+++DI A+Q +YGA + +Y ++
Sbjct: 228 FGEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDEN 287
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + N++IA+ IE+ +G S
Sbjct: 288 SKLLFTAWDTGGNDTFDFSGFTQDQ-RINLNEASFSDVGGLKGNVSIARGVTIENAIGGS 346
Query: 276 GNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYL 315
GNDV+IGN A N +G+D+ G G DTF Y +
Sbjct: 347 GNDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSARES 395
>gi|54038903|sp|Q84F70|PRTA1_PHOLU RecName: Full=Secreted alkaline metalloproteinase
gi|28395574|gb|AAO39138.1| secreted alkaline metalloproteinase [Photorhabdus luminescens]
Length = 486
Score = 236 bits (603), Expect = 6e-60, Method: Composition-based stats.
Identities = 88/330 (26%), Positives = 140/330 (42%), Gaps = 39/330 (11%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y F+ KPD + H + + N + A+
Sbjct: 52 DAAKELIRGDYRWGHQDDDKSKAFQLKYTFLESKPDDMPWHI--SEFSAFNEKQKAAAKL 109
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYD-SRYFMEINFDKAD 108
++ W+ V ++ F ET+ + + + PR + ++ N
Sbjct: 110 SIQSWADVANINFVETTDAKEANITFGFFDVSLTGSYAFAYLPRPEKTQLGTWYNAKSRT 169
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
I HEIGH LGL HP YN P Y Y DS +VMSY
Sbjct: 170 FSNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDEVSPTYKNSATYFEDSRAYTVMSY 229
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ---------KD 215
F +++ D Y + P+++DI A+Q +YGA + +Y ++
Sbjct: 230 FSEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDEN 289
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + N++IA+ IE+ +G S
Sbjct: 290 SKLLFTAWDTGGNDTFDFSGFTQDQ-RINLNEASFSDVGGLKGNVSIARGVTIENAIGGS 348
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
GNDV+IGN A N +G+D+ G G D
Sbjct: 349 GNDVLIGNDAANTLKGGAGDDIIYGGLGAD 378
>gi|117655427|gb|ABK55613.1| insecticidal protein [Serratia marcescens]
Length = 487
Score = 236 bits (603), Expect = 6e-60, Method: Composition-based stats.
Identities = 100/421 (23%), Positives = 165/421 (39%), Gaps = 45/421 (10%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++ E+ + R+ Q W+ Y + + T +++ +
Sbjct: 41 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L W+ V ++TF E + N Y P
Sbjct: 101 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIWQ 160
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 161 GQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDVTY 220
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 221 AEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNSN 280
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 281 TGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 339
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ANNV +GNDV G G D + +
Sbjct: 340 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGAD--ELWGGAGKDIFVFSAA 397
Query: 324 AIIVYDANEHKQDFLSDVERL---RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ A++ +DF ++++ F + S + TA L +V
Sbjct: 398 SDSAPGASDWIRDFQKGIDKIDLSFFNKEANSSDFIHFVDHFSGTAGEALLSYNASSNVT 457
Query: 381 E 381
+
Sbjct: 458 D 458
>gi|62754167|gb|AAX99101.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
gi|62754173|gb|AAX99104.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
gi|62754187|gb|AAX99111.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 236 bits (603), Expect = 6e-60, Method: Composition-based stats.
Identities = 90/349 (25%), Positives = 143/349 (40%), Gaps = 48/349 (13%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y F+ KPD + H + + N + A+
Sbjct: 50 DAAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKL 107
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYD-SRYFMEINFDKAD 108
++ W+ V ++ F ET+ + + + P + ++ N
Sbjct: 108 SIQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRT 167
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
I HEIGH LGL HP YN P Y Y DS +VMSY
Sbjct: 168 FLNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSY 227
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ---------KD 215
F +++ D Y + P+++DI A+Q +YGA + +Y ++
Sbjct: 228 FGEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDEN 287
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + N++IA+ IE+ +G S
Sbjct: 288 SKLLFTAWDTGGNDTFDFSGFTQDQ-RINLNEASFSDVGGLKGNVSIARGVTIENAIGGS 346
Query: 276 GNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYL 315
GNDV+IGN A N +G+D+ G G DTF Y +
Sbjct: 347 GNDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKES 395
>gi|62754181|gb|AAX99108.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 236 bits (603), Expect = 6e-60, Method: Composition-based stats.
Identities = 90/349 (25%), Positives = 143/349 (40%), Gaps = 48/349 (13%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y F+ KPD + H + + N + A+
Sbjct: 50 DAAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKL 107
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYD-SRYFMEINFDKAD 108
++ W+ V ++ F ET+ + + + P + ++ N
Sbjct: 108 SIQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRT 167
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
I HEIGH LGL HP YN P Y Y DS +VMSY
Sbjct: 168 FLNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKSSATYFEDSRAYTVMSY 227
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ---------KD 215
F +++ D Y + P+++DI A+Q +YGA + +Y ++
Sbjct: 228 FGEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDEN 287
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + N++IA+ IE+ +G S
Sbjct: 288 SKLLFTAWDTGGNDTFDFSGFTQDQ-RINLNEASFSDVGGLKGNVSIARGVTIENAIGGS 346
Query: 276 GNDVVIGNSANNVFFESSGNDVFDG---------SSGLDTFFYYAPSYL 315
GNDV+IGN A N +G+D+ G G DTF Y +
Sbjct: 347 GNDVLIGNDAANTLKGGAGDDIIYGGLGADNLWDGEGNDTFVYLSAKES 395
>gi|62754169|gb|AAX99102.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 236 bits (603), Expect = 7e-60, Method: Composition-based stats.
Identities = 90/349 (25%), Positives = 143/349 (40%), Gaps = 48/349 (13%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y F+ KPD + H + + N + A+
Sbjct: 50 DAAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKL 107
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYD-SRYFMEINFDKAD 108
++ W+ V ++ F ET+ + + + P + ++ N
Sbjct: 108 SIQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRT 167
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
I HEIGH LGL HP YN P Y Y DS +VMSY
Sbjct: 168 FLNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSY 227
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGA-PKGSLGNNIYKIEVQQ---------KD 215
F +++ D Y + P+++DI A+Q +YGA + +Y ++
Sbjct: 228 FGEKNTGQDFKGIYSSAPLLNDISAIQAVYGAKNTIRADDTVYGFNSNTDRDFYTAKDEN 287
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + N++IA+ IE+ +G S
Sbjct: 288 SKLLFTAWDTGGNDTFDFSGFTQDQ-RINLNEASFSDVGGLKGNVSIARGVTIENAIGGS 346
Query: 276 GNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYL 315
GNDV+IGN A N +G+D+ G G DTF Y +
Sbjct: 347 GNDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKES 395
>gi|157368459|ref|YP_001476448.1| serralysin [Serratia proteamaculans 568]
gi|157320223|gb|ABV39320.1| Serralysin [Serratia proteamaculans 568]
Length = 504
Score = 236 bits (603), Expect = 7e-60, Method: Composition-based stats.
Identities = 93/361 (25%), Positives = 147/361 (40%), Gaps = 40/361 (11%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++ E+ + R+ Q W+ Y + + T +++ +
Sbjct: 58 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPAKLTFSFPDYKFSSTNVAGDTGLSKFSAE 117
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L WS V +LTF E + N Y P
Sbjct: 118 QQQQAKLSLQSWSDVANLTFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIYQ 177
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 178 GQDLGGQTWYNVNQSNVKHPASEDYGRQTFTHEIGHALGLSHPGEYNAGEGNPTYNDVTY 237
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+++Y
Sbjct: 238 AEDTREFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDSVYGFNSN 297
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN S+S +GG + N++IA
Sbjct: 298 TGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNETSFSDVGGLKGNVSIA 356
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ NNV +GNDV G G D + A ++ +
Sbjct: 357 AGVTIENAIGGSGNDVIVGNAVNNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAVSD 416
Query: 324 A 324
+
Sbjct: 417 S 417
>gi|270264281|ref|ZP_06192548.1| serralysin, precursor [Serratia odorifera 4Rx13]
gi|270041930|gb|EFA15027.1| serralysin, precursor [Serratia odorifera 4Rx13]
Length = 504
Score = 236 bits (602), Expect = 8e-60, Method: Composition-based stats.
Identities = 93/361 (25%), Positives = 149/361 (41%), Gaps = 40/361 (11%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++TE+ + R+ Q W+ Y + + T +++ +
Sbjct: 58 NGKDSFSTEQAGLFITRENQTWNGYKVFGQPAKLTFSFPDYKFSSTNVAGDTGLSKFSAE 117
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L WS V ++TF E + N Y P
Sbjct: 118 QQQQAKLSLQSWSDVANITFTEVAPSQKANITFGNYSQDRPGHYDYDTQAYAFLPNTIYQ 177
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 178 GQNLGGQTWYNVNQSNVQHPASEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYNDASY 237
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 238 AEDTREFSLMSYWSETNTGGDNGGHYAAAPLLDDISAIQHLYGANLSTRTGDTVYGFNSN 297
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 298 TGRDFLSTSGNAQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 356
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ANNV +GND+ G +G D + A + +
Sbjct: 357 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDILFGGAGADELWGGAGKDTFVFAAVSD 416
Query: 324 A 324
+
Sbjct: 417 S 417
>gi|9438187|gb|AAF87588.1|AF286062_1 AprA [Pseudomonas brassicacearum]
Length = 487
Score = 236 bits (602), Expect = 8e-60, Method: Composition-based stats.
Identities = 100/418 (23%), Positives = 163/418 (38%), Gaps = 41/418 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ + A LLRD + F+ ++ +
Sbjct: 50 NGKPSYSVDEAATQLLRDGAAYQDRDGSGKIELTYTFLTSASSSTMNKHGISGFSQFSAQ 109
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 110 QKGQAALAMQSWADVANVTFAEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 169
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 170 WYLINSSYTQNKNPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGSPTYDDATYGQDTRG 229
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ- 213
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G++ Y
Sbjct: 230 YSVMSYWSESNTDQNFSKGGVEAYASGPLMDDIAAIQKLYGANTTTRTGDSTYGFNSNTG 289
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D+GG D LD + + I+LN S+S +GG N++IA+
Sbjct: 290 RDFLSASSSSDKVVFSVWDAGGRDTLDFSGFTQNQK-INLNDASFSDVGGMVGNVSIAKG 348
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
VIE+ +G +G+D++IGNS N +GND+ G+ G D + S ++
Sbjct: 349 AVIENAIGGAGSDLLIGNSVANELKGGAGNDILWGAGGADKL--WGGSGSDTFVFAASSD 406
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
A + DF+S ++++ + S L A L G +
Sbjct: 407 SRPGATDQILDFVSGLDKIDLTGIT-KGAGLHFVSALTGAAGDAVLSTSAGNSLLSVD 463
>gi|62754183|gb|AAX99109.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 236 bits (602), Expect = 9e-60, Method: Composition-based stats.
Identities = 91/349 (26%), Positives = 144/349 (41%), Gaps = 48/349 (13%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y F+ KPD + H + + N + A+
Sbjct: 50 DAAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKL 107
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYD-SRYFMEINFDKAD 108
++ W+ V ++ F ET+ + + + P + ++ N
Sbjct: 108 SIQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRT 167
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
I HEIGH LGL HP YN P Y Y DS +VMSY
Sbjct: 168 FLNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSY 227
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ---------KD 215
F +++ D Y + P+++DI A+Q +YGA K + +Y ++
Sbjct: 228 FGEKNTGQDFKGIYSSAPLLNDISAIQAVYGANKTIRADDPVYGFNSNTDRDFYTAKDEN 287
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + N++IA+ IE+ +G S
Sbjct: 288 SKLLFTAWDTGGNDTFDFSGFTQDQ-RINLNEASFSDVGGLKGNVSIARGVTIENAIGGS 346
Query: 276 GNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYL 315
GNDV+IGN A N +G+D+ G G DTF Y +
Sbjct: 347 GNDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKES 395
>gi|17978658|gb|AAL47190.1| S-layer editing metalloprotease SapA [Caulobacter vibrioides]
Length = 658
Score = 236 bits (602), Expect = 9e-60, Method: Composition-based stats.
Identities = 103/439 (23%), Positives = 170/439 (38%), Gaps = 54/439 (12%)
Query: 3 NIKPVYTTERIADHLLRDQ-----------YWSNYFIRYKPDVLTTHRLSFDITELNPNA 51
+ K T A LLR + + F P + + F ++ N
Sbjct: 41 DGKKSLTVPEAALQLLRSEPGWSNQFLVPATVTYAFRATAPASMPSDTGGF--SQFNAAQ 98
Query: 52 QEVARWALGEWSKVVDLTFEET----------SIHSDIKFIS------SNNGYVCTPRY- 94
A AL WS V ++TF S ++ I F + + G+ P
Sbjct: 99 ILQAEKALQAWSDVANITFVRVGQGTSGEAAYSDNASILFANFSTGSEGSAGFAYYPGNP 158
Query: 95 -DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP---VYGVD 150
S ++ + +HE+GHA+G+ HP YN Y V+
Sbjct: 159 AASSRSGDVWIKSTAGYNTNPTGSNYGGMVLVHELGHAIGIAHPSEYNASADDTLTYAVN 218
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
Y DS +VMSYF ++ Y ++P++ DI A Q YGA G+ +Y
Sbjct: 219 ATYYQDSRQYTVMSYFSEANTGGSFGGAYASSPLLDDIAAAQLAYGANMTTRTGDTVYGF 278
Query: 210 EVQ---------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ + ++D+GG D LD + + IDL +SS+GG + N+
Sbjct: 279 NSTAGREWFAATSSSTRLVFAVWDAGGVDTLDFSGYRVAQ-TIDLRAGYFSSVGGLKGNV 337
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TIA + VIE+ +G S D + GN+ +N +G D+ DG G+DT + Y +
Sbjct: 338 TIAMNAVIENAIGGSAADTINGNAVDNRLTGGAGADILDGGRGVDTAVFSGAYGNYTLTA 397
Query: 321 FENAIIVYDA--NEHKQDFLSDVERLRFADQCIDSVNVKQRSILE-------YTASYEDL 371
N D L+++E L F D+ + V+ + + + ++AS E L
Sbjct: 398 ATNGAWSVLDRVGTDATDTLANIEFLAFTDRTVTLVDSRVATAISNILRLQTFSASAEPL 457
Query: 372 IQVIGQDVFESMKHFYEFG 390
+ + + H G
Sbjct: 458 SKSLAASMAAGASHSDAIG 476
>gi|238791577|ref|ZP_04635215.1| Serralysin [Yersinia intermedia ATCC 29909]
gi|238729193|gb|EEQ20709.1| Serralysin [Yersinia intermedia ATCC 29909]
Length = 479
Score = 236 bits (601), Expect = 1e-59, Method: Composition-based stats.
Identities = 99/413 (23%), Positives = 159/413 (38%), Gaps = 38/413 (9%)
Query: 3 NIKPVYTTERIADHLLR-DQYWSNYF-------IRYKPDVLTTHRLSFD--ITELNPNAQ 52
N KP Y+ E + R DQ W+ + + Y T D + NP
Sbjct: 40 NGKPSYSNEDAGLQITRTDQTWNGKYVFDQPVKLTYSFLDSVTRIPGGDKGFVKFNPAQI 99
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSN------------NGYVCTPRYDSRYFM 100
A+ +L WS ++TF E + N Y P S
Sbjct: 100 ATAKLSLQSWSDAANITFTEITPSQKANVTFGNFTLSHDGSLADSQAYALLPGSGSSSGS 159
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
++ HEIGHALGL HPG+YN G D Y D+
Sbjct: 160 T-WYNYNVDNIRHPDTMEYGRQTLTHEIGHALGLSHPGNYNAGEGTPTYKDVTYAEDTRQ 218
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ----- 213
S+MSY+ +++ D Y A PM+ DI A+Q +YGA G+ IY
Sbjct: 219 FSIMSYWNEKNTGGDNKGHYAAAPMLDDIAAIQHLYGANMTTRTGDTIYGFHSNTHRDYY 278
Query: 214 ----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
I +++D+ G+D D + + I+L+ S++ +GG + N++IA IE
Sbjct: 279 TAADSSKALIFSVWDADGNDTFDFSGYSNDQ-RINLHEGSFTDVGGLKGNVSIAAGVTIE 337
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ +G SGND+++GN A N GND+ G G D + ++ + ++
Sbjct: 338 NAIGGSGNDIIVGNDARNTLMGGDGNDILFGDGGADVLWGGGGKDIFVFGKVSDSTPQVA 397
Query: 330 ANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
DF ++++ + +S + A L G +V +
Sbjct: 398 DWIM--DFERGIDKIDLSAFNFANSGGFHFVNSFSGKAGEAMLTYDAGSNVSD 448
>gi|124518424|gb|ABN13866.1| metalloprotease precursor [Serratia sp. KCK]
Length = 493
Score = 236 bits (601), Expect = 1e-59, Method: Composition-based stats.
Identities = 100/421 (23%), Positives = 162/421 (38%), Gaps = 45/421 (10%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++TE+ + R+ Q W+ Y + + T +++ +
Sbjct: 47 NGKDSFSTEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 106
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L WS V ++TF E N Y P
Sbjct: 107 QQQQAKLSLQSWSDVANITFTEVGAGQKANITFGNYSQDRPGHYDYDTQAYAFLPNTIYQ 166
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 167 GQNLGGQTWYNVNQSNVKHPASEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDASY 226
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 227 AEDTREFSLMSYWSETNTGGDNGGHYAAAPLLDDISAIQHLYGANQTTRTGDTVYGFNSN 286
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 287 TGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 345
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ANNV +GNDV G G D + +
Sbjct: 346 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGAD--ELWGGAGKDTFVFSAV 403
Query: 324 AIIVYDANEHKQDFLSDVERL---RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ A++ +DF ++++ F + A L +V
Sbjct: 404 SDSAPGASDWIKDFQKGIDKIDLSFFNQGAQGGDQIHFVDHFSGAAGEALLSYNASNNVS 463
Query: 381 E 381
+
Sbjct: 464 D 464
>gi|62754171|gb|AAX99103.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 236 bits (601), Expect = 1e-59, Method: Composition-based stats.
Identities = 90/349 (25%), Positives = 143/349 (40%), Gaps = 48/349 (13%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y F+ KPD + H + + N + A+
Sbjct: 50 DAAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKL 107
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYD-SRYFMEINFDKAD 108
++ W+ V ++ F ET+ + + + P + ++ N
Sbjct: 108 SIQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRT 167
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
I HEIGH LGL HP YN P Y Y DS +VMSY
Sbjct: 168 FLNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSY 227
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ---------KD 215
F +++ D Y + P+++DI A+Q +YGA + +Y ++
Sbjct: 228 FGEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDPVYGFNSNPDRDFYTAKDEN 287
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + N++IA+ IE+ +G S
Sbjct: 288 SKLLFTAWDTGGNDTFDFSGFTQDQ-RINLNEASFSDVGGLKGNVSIARGVTIENAIGGS 346
Query: 276 GNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYL 315
GNDV+IGN A N +G+D+ G G DTF Y +
Sbjct: 347 GNDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKES 395
>gi|32172419|sp|P07268|PRZN_SERME RecName: Full=Serralysin; AltName: Full=Extracellular
metalloproteinase; AltName: Full=Serratiopeptidase;
Short=Serrapeptase; Short=Serrapeptidase; AltName:
Full=Zinc proteinase; Flags: Precursor
Length = 487
Score = 236 bits (601), Expect = 1e-59, Method: Composition-based stats.
Identities = 99/419 (23%), Positives = 162/419 (38%), Gaps = 54/419 (12%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++ E+ + R+ Q W+ Y + + T +++ +
Sbjct: 41 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L W+ V ++TF E + N Y P
Sbjct: 101 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIWQ 160
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 161 GQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDVTY 220
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 221 AEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNSN 280
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 281 TGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 339
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ANNV +GNDV G G D + +
Sbjct: 340 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGAD--ELWGGAGKDIFVFSAA 397
Query: 324 AIIVYDANEHKQDFLSDVERL------------RFADQCIDSVNVKQRSILEYTASYED 370
+ A++ +DF ++++ F ++L Y AS
Sbjct: 398 SDSAPGASDWIRDFQKGIDKIDLSFFNKEAQSSDFIHFVDHFSGAAGEALLSYNASNNV 456
>gi|62754185|gb|AAX99110.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats.
Identities = 90/349 (25%), Positives = 143/349 (40%), Gaps = 48/349 (13%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y F+ KPD + H + + N + A+
Sbjct: 50 DAAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNIPWHI--SEFSAFNEAQKAAAKL 107
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYD-SRYFMEINFDKAD 108
++ W+ V ++ F ET+ + + + P + ++ N
Sbjct: 108 SIQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRT 167
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
I HEIGH LGL HP YN P Y Y DS +VMSY
Sbjct: 168 FLNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSY 227
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ---------KD 215
F +++ D Y + P+++DI A+Q +YGA + +Y ++
Sbjct: 228 FGEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDEN 287
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + N++IA+ IE+ +G S
Sbjct: 288 SKLLFTAWDTGGNDTFDFSGFTQDQ-RINLNEASFSDVGGLKGNVSIARGVTIENAIGGS 346
Query: 276 GNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYL 315
GNDV+IGN A N +G+D+ G G DTF Y +
Sbjct: 347 GNDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKES 395
>gi|242556628|pdb|3HBV|P Chain P, Prtc Methionine Mutants: M226a In-House
gi|242556638|pdb|3HDA|P Chain P, Prtc Methionine Mutants: M226a_desy
Length = 462
Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats.
Identities = 99/417 (23%), Positives = 164/417 (39%), Gaps = 38/417 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N K Y+ ++ A + R+ + + + +K + S D + N
Sbjct: 26 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 85
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
E A+ +L WS V +LTF E + + N Y P + +
Sbjct: 86 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYP-GNYQGA 144
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
++ G HEIGHALGL HPG YN G D Y DS+
Sbjct: 145 GSSWYNYNQSNIRNPGSEEYGRQTFTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAEDSY 204
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+ SY+ ++ D + Y PM+ DI A+Q++YGA G+++Y
Sbjct: 205 QFSIASYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDRDF 264
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG D D + + I+LN S+S +GG + N++IA I
Sbjct: 265 YTATDSSKALIFSVWDAGGTDTFDFSGYSNNQ-RINLNEGSFSDVGGLKGNVSIAHGVTI 323
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND+++GNSA+N+ +GNDV G +G DT + +
Sbjct: 324 ENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY--GGAGRDTFVYGSGQDSTV 381
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF ++++ + + + L + H
Sbjct: 382 AAYDWIADFQKGIDKIDLSAFRNEGQLSFVQDQFTGKGQEVMLQWDAANSITNLWLH 438
>gi|254574998|pdb|3HBU|P Chain P, Prtc Methionine Mutants: M226h Desy
Length = 462
Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats.
Identities = 99/417 (23%), Positives = 164/417 (39%), Gaps = 38/417 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N K Y+ ++ A + R+ + + + +K + S D + N
Sbjct: 26 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 85
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
E A+ +L WS V +LTF E + + N Y P + +
Sbjct: 86 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYP-GNYQGA 144
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
++ G HEIGHALGL HPG YN G D Y DS+
Sbjct: 145 GSSWYNYNQSNIRNPGSEEYGRQTFTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAEDSY 204
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+ SY+ ++ D + Y PM+ DI A+Q++YGA G+++Y
Sbjct: 205 QFSIHSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDRDF 264
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG D D + + I+LN S+S +GG + N++IA I
Sbjct: 265 YTATDSSKALIFSVWDAGGTDTFDFSGYSNNQ-RINLNEGSFSDVGGLKGNVSIAHGVTI 323
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND+++GNSA+N+ +GNDV G +G DT + +
Sbjct: 324 ENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY--GGAGRDTFVYGSGQDSTV 381
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF ++++ + + + L + H
Sbjct: 382 AAYDWIADFQKGIDKIDLSAFRNEGQLSFVQDQFTGKGQEVMLQWDAANSITNLWLH 438
>gi|131125|sp|P23694|PRZN_SERMA RecName: Full=Serralysin; AltName: Full=Extracellular
metalloproteinase; AltName: Full=Zinc proteinase; Flags:
Precursor
gi|47239|emb|CAA39137.1| metalloprotease [Serratia marcescens]
Length = 487
Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats.
Identities = 100/421 (23%), Positives = 165/421 (39%), Gaps = 45/421 (10%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++ E+ + R+ Q W+ Y + + T +++ +
Sbjct: 41 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L W+ V ++TF E + N Y P
Sbjct: 101 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIWQ 160
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 161 GQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYNDVTY 220
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 221 AEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANPSTRTGDTVYGFNSN 280
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 281 TGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 339
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ANNV +GNDV G G D + +
Sbjct: 340 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGAD--ELWGGAGKDIFVFSAA 397
Query: 324 AIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ A++ +DF ++++ F + S + TA L +V
Sbjct: 398 SDSAPGASDWIRDFQKGIDKIDLSFFNKEANSSDFIHFVDHFSGTAGEALLSYNASSNVT 457
Query: 381 E 381
+
Sbjct: 458 D 458
>gi|62754175|gb|AAX99105.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats.
Identities = 90/349 (25%), Positives = 143/349 (40%), Gaps = 48/349 (13%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y F+ KPD + H + + N + A+
Sbjct: 50 DAAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKL 107
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYD-SRYFMEINFDKAD 108
++ W+ V ++ F ET+ + + + P + ++ N
Sbjct: 108 SIQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRT 167
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
I HEIGH LGL HP YN P Y Y DS +VMSY
Sbjct: 168 FLNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSY 227
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ---------KD 215
F +++ D Y + P+++DI A+Q +YGA + +Y ++
Sbjct: 228 FGEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDPVYGFNSNTDRDFYTAKDEN 287
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + N++IA+ IE+ +G S
Sbjct: 288 SKLLFTAWDTGGNDTFDFSGFTQDQ-RINLNEASFSDVGGLKGNVSIARGVTIENAIGGS 346
Query: 276 GNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYL 315
GNDV+IGN A N +G+D+ G G DTF Y +
Sbjct: 347 GNDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKES 395
>gi|28395571|gb|AAO39136.1| secreted alkaline metalloproteinase [Photorhabdus luminescens]
Length = 483
Score = 235 bits (600), Expect = 2e-59, Method: Composition-based stats.
Identities = 88/342 (25%), Positives = 145/342 (42%), Gaps = 39/342 (11%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y + F+ +PD + H F + N + A+
Sbjct: 49 NAAKELIRGDYRWGHQGDDKSETFQLTYSFLESEPDNMPWHIAGF--SAFNEEQRTAAKL 106
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYDSRY-FMEINFDKAD 108
++ W+ V ++ F ET+ + + P +S+ N
Sbjct: 107 SIQSWTDVANINFTETTDSDKAHITFGFFDASLTGSYAFAYLPSPESKQSGTWYNLKSRT 166
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
IG HEIGH LGL HP +YN P Y Y DS +VMSY
Sbjct: 167 FSENDIGVNGYGRQTFTHEIGHTLGLEHPAAYNASDKERPTYKKSATYFEDSRAYTVMSY 226
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---------KD 215
F +++ D Y + P+++DI A+Q++YGA + +Y ++
Sbjct: 227 FGEKNTGQDFKGIYSSAPLLNDISAIQEVYGANNTTRTDDTVYGFNSNTDRDFFTAKDEN 286
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + N++IA+ IE+ +G S
Sbjct: 287 SKLLFTAWDAGGNDTFDFSGFTQDQ-RINLNEASFSDVGGLKGNVSIARGVTIENAIGGS 345
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
GND++IGN A+N +G+D+ G G D + +
Sbjct: 346 GNDILIGNDADNTLKGGAGDDIIYGGLGADQLWGGEGKDTFV 387
>gi|37524656|ref|NP_928000.1| alkaline metalloprotease precursor PrtA [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|54038902|sp|Q7N8R3|PRTA_PHOLL RecName: Full=Secreted alkaline metalloproteinase
gi|36784081|emb|CAE12950.1| Alkaline metalloprotease precursor PrtA [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 480
Score = 235 bits (600), Expect = 2e-59, Method: Composition-based stats.
Identities = 90/349 (25%), Positives = 143/349 (40%), Gaps = 48/349 (13%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y F+ KPD + H + + N + A+
Sbjct: 46 DAAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKL 103
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYD-SRYFMEINFDKAD 108
++ W+ V ++ F ET+ + + + P + ++ N
Sbjct: 104 SIQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRT 163
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
I HEIGH LGL HP YN P Y Y DS +VMSY
Sbjct: 164 FLNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSY 223
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ---------KD 215
F +++ D Y + P+++DI A+Q +YGA + +Y ++
Sbjct: 224 FGEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDEN 283
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + N++IA+ IE+ +G S
Sbjct: 284 SKLLFTAWDTGGNDTFDFSGFTQDQ-RINLNEASFSDVGGLKGNVSIARGVTIENAIGGS 342
Query: 276 GNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYL 315
GNDV+IGN A N +G+D+ G G DTF Y +
Sbjct: 343 GNDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKES 391
>gi|3169102|emb|CAA76737.1| serralysin [Pseudomonas sp. 'TAC II 18']
Length = 480
Score = 235 bits (600), Expect = 2e-59, Method: Composition-based stats.
Identities = 101/401 (25%), Positives = 161/401 (40%), Gaps = 41/401 (10%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP +T +++AD L R W + F+ P + L ++ +
Sbjct: 43 NGKPSFTVDQVADQLTRSGASWHDLNNDGVINLTYTFLTAPPVGYASRGLG-TFSQFSAL 101
Query: 51 AQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFME 101
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 102 QKEQAKLSLESWADVAKVTFTEGPAARGDDGHMTFANFSASNGGAAFAYLPNSSRKGESW 161
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 162 YLINKDYQVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYAEDTRAY 221
Query: 161 SVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ--- 212
SVMSY+ +++ + Y + P++ DI AVQK+YGA + + +Y
Sbjct: 222 SVMSYWSEKNTGQVFTKTGEGAYASAPLLDDIAAVQKLYGANLETRADDTVYGFNSTADR 281
Query: 213 ------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D GG+D LD + + I+L S+S +GG N++IAQ
Sbjct: 282 DFYSATSSTDKLIFSVWDGGGNDTLDFSGFSQNQK-INLTAGSFSDVGGMTGNVSIAQGV 340
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND++IGN A NV +GND+ G G D + + +
Sbjct: 341 TIENAIGGSGNDLLIGNDAANVLKGGAGNDIIYGGGGAD--VLWGGTGSDTFVFGAVSDS 398
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A + +DF S +++ + A
Sbjct: 399 TPKAADIIKDFQSGFDKIDLTAIT-KLGGLNFVDAFTGHAG 438
>gi|16124999|ref|NP_419563.1| alkaline metalloproteinase [Caulobacter crescentus CB15]
gi|221233720|ref|YP_002516156.1| secreted protease precursor sapA [Caulobacter crescentus NA1000]
gi|13421979|gb|AAK22731.1| alkaline metalloproteinase, putative [Caulobacter crescentus CB15]
gi|220962892|gb|ACL94248.1| secreted protease precursor sapA [Caulobacter crescentus NA1000]
Length = 658
Score = 235 bits (600), Expect = 2e-59, Method: Composition-based stats.
Identities = 102/439 (23%), Positives = 169/439 (38%), Gaps = 54/439 (12%)
Query: 3 NIKPVYTTERIADHLLRDQ-----------YWSNYFIRYKPDVLTTHRLSFDITELNPNA 51
+ K T A LLR + + F P + + F ++ N
Sbjct: 41 DGKKSLTVPEAALQLLRSEPGWSNQFLVPATVTYAFRATAPASMPSDTGGF--SQFNAAQ 98
Query: 52 QEVARWALGEWSKVVDLTFEET----------SIHSDIKFIS------SNNGYVCTPRY- 94
A AL WS V ++TF S ++ I F + + G+ P
Sbjct: 99 ILQAEKALQAWSDVANITFVRVGQGTSGEAAYSDNASILFANFSTGSEGSAGFAYYPGNP 158
Query: 95 -DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP---VYGVD 150
S ++ + +HE+GHA+G+ HP YN Y +
Sbjct: 159 AASSRSGDVWIKSTAGYNTNPTGSNYGGMVLVHELGHAIGIAHPSEYNASADDTLTYAAN 218
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
Y DS +VMSYF ++ Y ++P++ DI A Q YGA G+ +Y
Sbjct: 219 ATYYQDSRQYTVMSYFSEANTGGSFGGAYASSPLLDDIAAAQLAYGANMTTRTGDTVYGF 278
Query: 210 EVQ---------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ + ++D+GG D LD + + IDL +SS+GG + N+
Sbjct: 279 NSTAGREWFAATSSSTRLVFAVWDAGGVDTLDFSGYRVAQ-TIDLRAGYFSSVGGLKGNV 337
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TIA + VIE+ +G S D + GN+ +N +G D+ DG G+DT + Y +
Sbjct: 338 TIAMNAVIENAIGGSAADTINGNAVDNRLTGGAGADILDGGRGVDTAVFSGAYGNYTLTA 397
Query: 321 FENAIIVYDA--NEHKQDFLSDVERLRFADQCIDSVNVKQRSILE-------YTASYEDL 371
N D L+++E L F D+ + V+ + + + ++AS E L
Sbjct: 398 ATNGAWSVLDRVGTDATDTLANIEFLAFTDRTVTLVDSRVATAISNILRLQTFSASAEPL 457
Query: 372 IQVIGQDVFESMKHFYEFG 390
+ + + H G
Sbjct: 458 SKSLAASMAAGASHSDAIG 476
>gi|24987254|pdb|1GO7|P Chain P, The Metzincin's Methionine: Prtc M226c-E189k Double Mutant
Length = 462
Score = 235 bits (600), Expect = 2e-59, Method: Composition-based stats.
Identities = 98/417 (23%), Positives = 164/417 (39%), Gaps = 38/417 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N K Y+ ++ A + R+ + + + +K + S D + N
Sbjct: 26 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 85
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
E A+ +L WS V +LTF E + + N Y P + +
Sbjct: 86 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYP-GNYQGA 144
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
++ G H+IGHALGL HPG YN G D Y DS+
Sbjct: 145 GSSWYNYNQSNIRNPGSEEYGRQTFTHKIGHALGLAHPGEYNAGEGDPSYNDAVYAEDSY 204
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+ SY+ ++ D + Y PM+ DI A+Q++YGA G+++Y
Sbjct: 205 QFSICSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDRDF 264
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG D D + + I+LN S+S +GG + N++IA I
Sbjct: 265 YTATDSSKALIFSVWDAGGTDTFDFSGYSNNQ-RINLNEGSFSDVGGLKGNVSIAHGVTI 323
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND+++GNSA+N+ +GNDV G +G DT + +
Sbjct: 324 ENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY--GGAGRDTFVYGSGQDSTV 381
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF ++++ + + + L + H
Sbjct: 382 AAYDWIADFQKGIDKIDLSAFRNEGQLSFVQDQFTGKGQEVMLQWDAANSITNLWLH 438
>gi|330809663|ref|YP_004354125.1| Alkaline metalloproteinase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377771|gb|AEA69121.1| Alkaline metalloproteinase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 485
Score = 235 bits (599), Expect = 2e-59, Method: Composition-based stats.
Identities = 100/418 (23%), Positives = 163/418 (38%), Gaps = 41/418 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ + A LLRD + F+ ++ +
Sbjct: 48 NGKPSYSVDEAATQLLRDGAAYQDRDGSGKIELTYTFLTSASSSTMNKHGISGFSQFSAQ 107
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 108 QKGQAALAMQSWADVANVTFAEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 167
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 168 WYLINSSYTQNKNPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGSPTYDDATYGQDTRG 227
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ- 213
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G++ Y
Sbjct: 228 YSVMSYWSESNTDQNFSKGGVEAYASGPLMDDIAAIQKLYGANTTTRTGDSTYGFNSNTG 287
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D+GG D LD + + I+LN S+S +GG N++IA+
Sbjct: 288 RDFLSASSSSDKVVFSVWDAGGRDTLDFSGFTQNQK-INLNDASFSDVGGMVGNVSIAKG 346
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
VIE+ +G +G+D++IGNS N +GND+ G+ G D + S ++
Sbjct: 347 AVIENAIGGAGSDLLIGNSVANELKGGAGNDILWGAGGADKL--WGGSGSDTFVFAASSD 404
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
A + DF+S ++++ + S L A L G +
Sbjct: 405 SRPGATDQILDFVSGLDKIDLTGIT-KGAGLHFVSALTGAAGDAVLSTSAGNSLLSVD 461
>gi|229589310|ref|YP_002871429.1| putative metalloprotease [Pseudomonas fluorescens SBW25]
gi|229361176|emb|CAY48040.1| putative metalloprotease [Pseudomonas fluorescens SBW25]
Length = 510
Score = 235 bits (599), Expect = 2e-59, Method: Composition-based stats.
Identities = 107/365 (29%), Positives = 151/365 (41%), Gaps = 26/365 (7%)
Query: 4 IKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWS 63
KP YTT++ A L R+ + F D + D Q+ R AL W
Sbjct: 29 NKPAYTTDQAAKQLSRE---NLRFHDRNDDSTVDVHYTVD-NSFTQPQQQRVRQALQSWQ 84
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVC---TPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
V ++ F E S SD NN + G+
Sbjct: 85 DVANINFREQSGDSDGTLNVRNNPRSDRGVATSPNRTTPHTTATLGTQGGNSSAALGSHF 144
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD-SMMDASFGY 179
S A+HEIGHA+GL HPG YNGG P Y Y D+ +VMSYF ++ D
Sbjct: 145 SLTAIHEIGHAIGLHHPGDYNGGNPNYQTGATYAGDTHARTVMSYFSEKNQKGHDFKNQS 204
Query: 180 CATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPF---------IQTIYDSGGDD 229
+ PM+ DI A Q++YGA + + Y + F + ++D GG D
Sbjct: 205 PSAPMMDDIAAAQRLYGANHQTRNTDTTYGFNSNTEREAFSLKSATDKPVFCVWDGGGID 264
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+D + +N IDLN ES+S +GG + N++IA+ IE+ +G +G D + GN A N
Sbjct: 265 TMDFSGFAQDQN-IDLNAESFSDVGGLKGNVSIAKGCTIENAMGGAGRDTLSGNDAANRL 323
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYL-----YKIYRFENAIIVYDANEHKQDFLSDVERL 344
G D G G DTF Y S I F + D + +D + V L
Sbjct: 324 KGGGGADTLRGGGGADTFVYDKASDSTPDQPDMIEDFTSGTDKIDVSGALKD--AGVRGL 381
Query: 345 RFADQ 349
F D+
Sbjct: 382 VFTDR 386
>gi|730410|sp|Q07295|PRTA_ERWCH RecName: Full=Secreted protease A; Short=ProA; Flags: Precursor
gi|297898|emb|CAA49611.1| protease A [Erwinia chrysanthemi]
Length = 472
Score = 235 bits (599), Expect = 2e-59, Method: Composition-based stats.
Identities = 95/378 (25%), Positives = 153/378 (40%), Gaps = 41/378 (10%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N KP Y+ E D + RD + + + +K D + N
Sbjct: 41 NGKPSYSIEDAGDQITRDNVSWNGSNVFGKSANLTFKFLQSARSTPDGDTGFVKFNAAQV 100
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
A+ AL W+ + ++TF E + + N Y P S
Sbjct: 101 AQAKLALQSWADLANITFTEVTGNQSANVTFGNYTRDSSGRLDYGTQAYAYLPGSGSASG 160
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
++ K HEIGHALGL HPG YN G + Y D+
Sbjct: 161 TT-WYNYNVDNIRSPDKMEYGRQTLTHEIGHALGLNHPGDYNAGEG----NPTYREDTRQ 215
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ----- 213
S+MSY+ +++ D Y A PM+ DI A+Q++YGA G+ +Y
Sbjct: 216 FSIMSYWSEKNTGGDFKGHYAAGPMLDDIDAIQRLYGANMTTRTGDTVYGFNSNTDRDFY 275
Query: 214 ----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
I +++D+GG D + + I+LN S S +GG + N++IA IE
Sbjct: 276 TATSSSKALIFSVWDAGGKHTFDFSGYSNNQ-RINLNEGSLSDVGGLKGNVSIAHGVTIE 334
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ +G SGND++IGN+A+N+ +G+D+ G G D + S +
Sbjct: 335 NAIGGSGNDLLIGNNADNILRGGAGDDILYGGGGADRLY--GGSGRDTFVYTAVSDSKVA 392
Query: 330 ANEHKQDFLSDVERLRFA 347
A + DF + V+++ +
Sbjct: 393 APDWILDFQTGVDKIDLS 410
>gi|62754179|gb|AAX99107.1| secreted alkaline metalloprotease [Photorhabdus luminescens subsp.
laumondii]
Length = 484
Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats.
Identities = 89/349 (25%), Positives = 143/349 (40%), Gaps = 48/349 (13%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y F+ KPD + H + + N + A+
Sbjct: 50 DAAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNMPWHI--SEFSAFNEAQKAAAKL 107
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYD-SRYFMEINFDKAD 108
++ W+ V ++ F ET+ + + + P + ++ N
Sbjct: 108 SIQSWADVANINFVETTDAKEANVTFGFFDVSLTGSYAFAYLPTPEKTQVGTWYNAKSRT 167
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
I HEIGH LGL HP YN P Y Y DS +VMSY
Sbjct: 168 FLNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSY 227
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ---------KD 215
F +++ D Y + P+++DI A+Q +YGA + +Y ++
Sbjct: 228 FGEKNTGQDFKGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDEN 287
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + +++IA+ IE+ +G S
Sbjct: 288 SKLLFTAWDTGGNDTFDFSGFTQGQ-RINLNEASFSDVGGLKGDVSIARGVTIENAIGGS 346
Query: 276 GNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYL 315
GNDV+IGN A N +G+D+ G G DTF Y +
Sbjct: 347 GNDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKES 395
>gi|251789714|ref|YP_003004435.1| Serralysin [Dickeya zeae Ech1591]
gi|247538335|gb|ACT06956.1| Serralysin [Dickeya zeae Ech1591]
Length = 478
Score = 235 bits (598), Expect = 3e-59, Method: Composition-based stats.
Identities = 101/425 (23%), Positives = 161/425 (37%), Gaps = 39/425 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N KP Y+ E D + RD + + + +K D + N
Sbjct: 42 NGKPSYSIEEAGDQITRDNVSWNGANVFGKSANLTFKFLQSARSTPDGDTGFVKFNAAQI 101
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
A+ AL W+ V ++TF E + + N Y P S
Sbjct: 102 SQAKLALQSWADVANVTFTEVTGNQSANVTFGNYTRDSSGRLDYGSQAYAYLPGSGSASG 161
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
++ HEIGHALGL HPG YN G D Y D+
Sbjct: 162 TT-WYNYNVDNIRSPDTMEYGRQTLTHEIGHALGLNHPGDYNAGEGNPSYSDVTYAEDTR 220
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+MSY+ +++ D Y A PM+ DI A+Q++YGA G+ +Y
Sbjct: 221 QFSIMSYWSEKNTGGDFKGHYAAGPMLDDIAAIQRLYGANMTTRTGDTVYGFNSNTDRDF 280
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I + +D+GG+D D + + I+LN S S +GG + N++IA+ I
Sbjct: 281 YTATSSSKALIFSAWDAGGNDTFDFSGYSNNQ-RINLNEGSLSDVGGLKGNVSIAEGVTI 339
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND++IGN+A+N +G+DV G SG D + S +
Sbjct: 340 ENAIGGSGNDLLIGNNADNTLRGGAGDDVLFGGSGADRLY--GGSGRDTFVYSATSDSKV 397
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
A + DF + +++ + N+ + + L + +
Sbjct: 398 AAPDWILDFQTGTDKIDLS-ALNTGNNLHFVNQFSGSGGEIMLNWDASANTSNLYLNLDN 456
Query: 389 FGLSE 393
E
Sbjct: 457 NTSPE 461
>gi|54038901|sp|P82115|PRTA_PHOAZ RecName: Full=Protease prtA; AltName: Full=Secreted alkaline
metalloproteinase
gi|42541022|gb|AAS19409.1| secreted alkaline metalloprotease [Photorhabdus sp. Az29]
Length = 483
Score = 234 bits (597), Expect = 3e-59, Method: Composition-based stats.
Identities = 88/342 (25%), Positives = 145/342 (42%), Gaps = 39/342 (11%)
Query: 12 RIADHLLRDQY--------------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
A L+R Y + F+ +PD + H F + N + A+
Sbjct: 49 NAAKELIRGDYRWGHQGDDKSETFQLTYSFLESEPDNMPWHITGF--SAFNEEQRTAAKL 106
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISS--------NNGYVCTPRYDSRY-FMEINFDKAD 108
++ W+ V ++ F ET+ + + P +S+ N
Sbjct: 107 SIQSWTDVANINFTETTDSDKAHITFGFFDASLTGSYAFAYLPSPESKQSGTWYNLKSRT 166
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSY 165
IG HEIGH LGL HP +YN P Y Y DS +VMSY
Sbjct: 167 FSENDIGVNGYGRQTFTHEIGHTLGLEHPAAYNASDKERPTYKKSATYFEDSRAYTVMSY 226
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---------KD 215
F +++ D Y + P+++DI A+Q++YGA + +Y ++
Sbjct: 227 FGEKNTRTDFKGIYSSAPLLNDISAIQEVYGANNTTRTDDTVYGFNSNTDRDFFTAKDEN 286
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
S + T +D+GG+D D + + I+LN S+S +GG + N++IA+ IE+ +G S
Sbjct: 287 SKLLFTAWDAGGNDTFDFSGFTQDQ-RINLNEASFSDVGGLKGNVSIARGVTIENAIGGS 345
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
GND++IGN A N+ +G+D+ G G D + +
Sbjct: 346 GNDILIGNDAENILKGGAGDDIIYGGLGADQLWGGEGKDTFV 387
>gi|307131039|ref|YP_003883055.1| secreted protease B [Dickeya dadantii 3937]
gi|306528568|gb|ADM98498.1| Secreted protease B precursor [Dickeya dadantii 3937]
Length = 481
Score = 234 bits (597), Expect = 3e-59, Method: Composition-based stats.
Identities = 99/419 (23%), Positives = 160/419 (38%), Gaps = 40/419 (9%)
Query: 3 NIKPVYTTERIADH-LLR--------DQYWSNYFIRYKPDVLTTHRLSF--DITELNPNA 51
N KP YTT++ L R + + + Y + + + P
Sbjct: 43 NGKPSYTTDKAVSEGLTRPHTTWNGDNVFGKAANLTYSFLNTFSSTPNGHTGPVKFTPVQ 102
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRY 98
+ A+ +L W+ +LTF E S + +N Y P
Sbjct: 103 MQQAKLSLQSWADAANLTFTEVSPNQKANITFANYTRNADGSLNTDTQAYAAYPGTHP-V 161
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN--GGYPVYGVDNDYEND 156
F+ H+ HEIGHALGL HP YN G Y Y D
Sbjct: 162 SGSAWFNYNQSSIRNPDTDEYGRHSFTHEIGHALGLSHPAEYNAGEGDISYKNSAAYAED 221
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ-- 213
S S+MSY+ +++ D Y A P++ DI A+QK+YGA G+ +Y
Sbjct: 222 SRQFSIMSYWEVENTGGDFKGHYSAGPLMDDIAAIQKLYGANMTTRTGDTVYGFNSNTDR 281
Query: 214 -------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ +++D+GG+D D + + I+LN S+S +GG + N++IA
Sbjct: 282 DFYTATNSSKALVFSVWDAGGNDTFDFSGYSNNQ-RINLNEGSFSDVGGLKGNVSIAHGV 340
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND++IGN A+N+ +G+DV GS+G DT +
Sbjct: 341 TIENAIGGSGNDILIGNGADNILQGGAGDDVLYGSTGADTL--TGGAGRDIFVYGSGQDS 398
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF + ++++ + + + L H
Sbjct: 399 TVSAYDWITDFQTGIDKIDLSAFRNEGQLSFVQDQFTGKGQEVMLQWDAANSTTNLWLH 457
>gi|238755251|ref|ZP_04616595.1| Serralysin [Yersinia ruckeri ATCC 29473]
gi|14161134|emb|CAC39217.1| metalloprotease p1 [Yersinia ruckeri]
gi|238706485|gb|EEP98858.1| Serralysin [Yersinia ruckeri ATCC 29473]
Length = 477
Score = 234 bits (597), Expect = 4e-59, Method: Composition-based stats.
Identities = 98/411 (23%), Positives = 159/411 (38%), Gaps = 37/411 (9%)
Query: 4 IKPVYTTERIADHLLR-DQYWSNYF-------IRYKPDVLTTHRLSFD--ITELNPNAQE 53
KP YT E + R +Q W+ + Y + S D + NP E
Sbjct: 41 GKPSYTPEEAGLQITRTNQTWNGKNVFDQPVKLTYSFLDQVSRIPSGDKGFVKFNPAQIE 100
Query: 54 VARWALGEWSKVVDLTFEETSIHSDIKFISSNN------------GYVCTPRYDSRYFME 101
VA+ +L W+ ++ F E + N Y P S
Sbjct: 101 VAKLSLQSWADAANIAFTEITSSQSANITFGNYTLSWNGKPADSQAYAYLPGSGS-PSGS 159
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLT 160
++ HEIGHALGL HPG+YN G D Y D+
Sbjct: 160 TWYNYNVDNIRNPDVMEYGRQTFTHEIGHALGLSHPGNYNAGQGDPSYKDVTYAEDTRQF 219
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ------ 213
S+MSY+ +++ D Y + P++ DI A+Q +YGA G+ IY
Sbjct: 220 SIMSYWSEKNTGGDNKGHYASAPLLDDISAIQHLYGANMTTRTGDTIYGFNSNTERDYYT 279
Query: 214 ---KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
I +++D+ G+D D + + I+L +S+S +GG + N++IA IE+
Sbjct: 280 AINSSKALIFSVWDADGNDTFDFSGYSNNQ-RINLYEQSFSDVGGLKGNVSIAAGVTIEN 338
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+G SGNDV++GN N ++GNDV G G D + S E +
Sbjct: 339 AIGGSGNDVLVGNDIANELHGAAGNDVLFGCGGADKL--WGGSGSDIFVYGEAMDSTPAS 396
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ DF S ++++ + + + +A L ++ +
Sbjct: 397 PDWIMDFESGIDKIDLSIFNSGNKGIHFVDHFTGSAGEALLTYDAQTNISD 447
>gi|131060|sp|P16316|PRTB_ERWCH RecName: Full=Secreted protease B; Short=ProB; Flags: Precursor
gi|148487|gb|AAA63637.1| neutral protease large subunit [Erwinia chrysanthemi]
gi|148494|gb|AAA24861.1| protease B precursor [Erwinia chrysanthemi]
Length = 481
Score = 234 bits (596), Expect = 4e-59, Method: Composition-based stats.
Identities = 99/419 (23%), Positives = 159/419 (37%), Gaps = 40/419 (9%)
Query: 3 NIKPVYTTERIADH-LLR--------DQYWSNYFIRYKPDVLTTHRLSF--DITELNPNA 51
N KP YTT++ L R + + + Y + + + P
Sbjct: 43 NGKPSYTTDKAVSEGLTRPHTTWNGDNVFGKAANLTYSFLNTFSSTPNGHTGPVKFTPVQ 102
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRY 98
+ A+ +L W+ +LTF E S + +N Y P
Sbjct: 103 MQQAKLSLQSWADAANLTFTEVSPNQKANITFANYTRNADGSLNTDTQAYAAYPGTHP-V 161
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN--GGYPVYGVDNDYEND 156
F+ H+ HEIGHALGL HP YN G Y Y D
Sbjct: 162 SGSAWFNYNQSSIRNPDTDEYGRHSFTHEIGHALGLSHPAEYNAGEGDISYKNSAAYAED 221
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ-- 213
S S+MSY+ +++ D Y A P++ DI A+QK+YGA G+ +Y
Sbjct: 222 SRQFSIMSYWEVENTGGDFKGHYSAGPLMDDIAAIQKLYGANMTTRTGDTVYGFNSNTDR 281
Query: 214 -------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ +++D+GG D D + + I+LN S+S +GG + N++IA
Sbjct: 282 DFYTATNSSKALVFSVWDAGGTDTFDFSGYSNNQ-RINLNEGSFSDVGGLKGNVSIAHGV 340
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND++IGN A+N+ +G+DV GS+G DT +
Sbjct: 341 TIENAIGGSGNDILIGNGADNILQGGAGDDVLYGSTGADTL--TGGAGRDIFVYGSGQDS 398
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF + ++++ + + + L H
Sbjct: 399 TVSAYDWITDFQTGIDKIDLSAFRNEGQLSFVQDQFTGKGQEVMLQWDAANSTTNLWLH 457
>gi|255311883|pdb|3HB2|P Chain P, Prtc Methionine Mutants: M226i
Length = 462
Score = 234 bits (596), Expect = 4e-59, Method: Composition-based stats.
Identities = 98/417 (23%), Positives = 164/417 (39%), Gaps = 38/417 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N K Y+ ++ A + R+ + + + +K + S D + N
Sbjct: 26 NGKTSYSIDQAAAQITRENVSWNGTNVFGKSANLTFKFLQSVSSIPSGDTGFVKFNAEQI 85
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
E A+ +L WS V +LTF E + + N Y P + +
Sbjct: 86 EQAKLSLQSWSDVANLTFTEVTGNKSANITFGNYTRDASGNLDYGTQAYAYYP-GNYQGA 144
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
++ G H IGHALGL HPG YN G D Y DS+
Sbjct: 145 GSSWYNYNQSNIRNPGSEEYGRQTFTHAIGHALGLAHPGEYNAGEGDPSYNDAVYAEDSY 204
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S++SY+ ++ D + Y PM+ DI A+Q++YGA G+++Y
Sbjct: 205 QFSIISYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFNSNTDRDF 264
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG D D + + I+LN S+S +GG + N++IA I
Sbjct: 265 YTATDSSKALIFSVWDAGGTDTFDFSGYSNNQ-RINLNEGSFSDVGGLKGNVSIAHGVTI 323
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND+++GNSA+N+ +GNDV G +G DT + +
Sbjct: 324 ENAIGGSGNDILVGNSADNILQGGAGNDVLYGGAGADTLY--GGAGRDTFVYGSGQDSTV 381
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF ++++ + + + L + H
Sbjct: 382 AAYDWIADFQKGIDKIDLSAFRNEGQLSFVQDQFTGKGQEVMLQWDAANSITNLWLH 438
>gi|70730574|ref|YP_260315.1| protease PrtA [Pseudomonas fluorescens Pf-5]
gi|68344873|gb|AAY92479.1| protease PrtA [Pseudomonas fluorescens Pf-5]
Length = 482
Score = 234 bits (596), Expect = 4e-59, Method: Composition-based stats.
Identities = 98/418 (23%), Positives = 160/418 (38%), Gaps = 41/418 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ A LLRD + F+ ++ +
Sbjct: 45 NGKPSFSVDQAATQLLRDGAAYKDLNGNGKIDLTYTFLTSASSSTMYKHGISGFSQFSAQ 104
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++ F E + D N + P + Y
Sbjct: 105 QKAQAVLAMQSWADVANVVFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 164
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 165 WYLINSSYTQNKNPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGNPSYKDASYGQDTRG 224
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 225 YSVMSYWSESNTSQNFSKGGVEAYSSGPLMDDIAAIQKLYGANYSTRAGDTTYGFNSNTG 284
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D GG+D LD + + I+LN S+S +GG N++IAQ
Sbjct: 285 RDFYSASSSSDKLVFSVWDGGGNDTLDFSGFTQNQK-INLNEASFSDVGGMVGNVSIAQG 343
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+E+ +G SGND++IGN+A NV +GND+ G+ G D + S +
Sbjct: 344 VTVENAIGGSGNDLLIGNNAANVLKGGAGNDIIYGAGGADQL--WGGSGSDTFVFAASTD 401
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
A + DF+S ++++ + + A L G
Sbjct: 402 SKPGAADQIMDFVSGLDKIDLTGIT-KGAGLHFVNAFTGAAGDAILTTSGGVSTLSVD 458
>gi|251789713|ref|YP_003004434.1| Serralysin [Dickeya zeae Ech1591]
gi|247538334|gb|ACT06955.1| Serralysin [Dickeya zeae Ech1591]
Length = 481
Score = 234 bits (596), Expect = 5e-59, Method: Composition-based stats.
Identities = 98/417 (23%), Positives = 162/417 (38%), Gaps = 38/417 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N K Y+ ++ A + R+ + + + +K T + D + N
Sbjct: 45 NGKTSYSADQAAAQITRENVSWNGTNVFGKSANLTFKFLQSATSTPAGDKGFVKFNAEQI 104
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
+ AL W+ V +LTF E + + N Y P + +
Sbjct: 105 AQTKLALQSWADVANLTFTEVTGNKSANLTFGNYTRDASGNLDYGTQAYAYYP-GNYQGA 163
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
++ G HEIGHALGL HPG YN G D Y DS+
Sbjct: 164 GSSWYNYNQSNIRSPGTEEYGRQTLTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAEDSY 223
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+MSY+ ++ D Y PM+ DI A+Q++YGA G+++Y
Sbjct: 224 QFSIMSYWGENETGADYKGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFHSNTDRDF 283
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG+D D + + I+LN S+S +GG + N++IA I
Sbjct: 284 YTANDSSKALIFSVWDAGGNDTFDFSGYSNNQ-RINLNEGSFSDVGGLKGNVSIAHGVTI 342
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND+++GN+A+NV +GND+ G++G DT +
Sbjct: 343 ENAIGGSGNDLLVGNAADNVLQGGAGNDILYGAAGADTL--SGGAGRDTFVYGSGQDSTV 400
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF S +++ + + L + H
Sbjct: 401 SAYDWINDFQSGADKIDLSAFRNGGQLSFVQDQFTGKGQEVMLQWDAANSITNLWLH 457
>gi|23452667|gb|AAN33118.1| extracellular metalloprotease EprC [Erwinia chrysanthemi]
Length = 479
Score = 233 bits (595), Expect = 6e-59, Method: Composition-based stats.
Identities = 98/417 (23%), Positives = 163/417 (39%), Gaps = 38/417 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N K Y+ ++ A + R+ + + + +K T + D + N
Sbjct: 43 NGKTSYSADQAAAQITRENVSWNGTNVFGKSANLTFKFLQSATSTPAGDKGFVKFNAEQI 102
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
+ AL W+ V +LTF E + + N Y P + +
Sbjct: 103 AQTKLALQSWADVANLTFTEVTGNKSANLTFGNYTRDASGNLDYGTQAYAYYP-GNYQGA 161
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
++ G HEIGHALGL HPG YN G D Y DS+
Sbjct: 162 GSSWYNYNQSNIRSPGTEEYGRQTLTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAEDSY 221
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+MSY+ ++ D + Y PM+ DI A+Q++YGA G+++Y
Sbjct: 222 QFSIMSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFHSNTDRDF 281
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG+D D + + I+LN S+S +GG + N++IA I
Sbjct: 282 YTANDSSKALIFSVWDAGGNDTFDFSGYSNNQ-RINLNEGSFSDVGGLKGNVSIAHGVTI 340
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND+++GN A+NV +GND+ G++G DT +
Sbjct: 341 ENAIGGSGNDLLVGNGADNVLQGGAGNDILYGAAGADTL--SGGAGRDTFVYGSGQDSTV 398
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF S +++ + + + L + H
Sbjct: 399 SAYDWINDFQSGADKIDLSAFRNEGQLSFVQDQFTGKGQEVMLQWDAANSITNLWLH 455
>gi|167487383|gb|ABZ81090.1| metalloprotease [Serratia nematodiphila]
Length = 473
Score = 233 bits (595), Expect = 6e-59, Method: Composition-based stats.
Identities = 94/384 (24%), Positives = 156/384 (40%), Gaps = 42/384 (10%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++ E+ + R+ Q W+ Y + + T +++ +
Sbjct: 41 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L W+ V ++TF E + N Y P
Sbjct: 101 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIWQ 160
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 161 GQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYNDVTY 220
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 221 AEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNSN 280
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 281 TGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 339
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ANNV +GNDV G G D + +
Sbjct: 340 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGAD--ELWGGAGKDIFVFSAA 397
Query: 324 AIIVYDANEHKQDFLSDVERLRFA 347
+ A++ +DF ++++ +
Sbjct: 398 SDSAPGASDWIRDFQKGIDKIDLS 421
>gi|293393921|ref|ZP_06638228.1| alkaline metalloproteinase [Serratia odorifera DSM 4582]
gi|291423748|gb|EFE96970.1| alkaline metalloproteinase [Serratia odorifera DSM 4582]
Length = 489
Score = 233 bits (594), Expect = 8e-59, Method: Composition-based stats.
Identities = 99/417 (23%), Positives = 162/417 (38%), Gaps = 41/417 (9%)
Query: 3 NIKPVYTTERIADHLLR-DQYWSN-------YFIRYKPDVLTTHRLSFD----ITELNPN 50
N K +TTE+ ++ R +Q W+ + Y + + +++ +
Sbjct: 47 NGKDSFTTEQAGLYITRSNQTWNGKGVFDTPVKLTYAFPDYAFNSANAGGDRGLSKFSVE 106
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRY------------ 98
Q+ A+ +L W+ V ++TF E S N D
Sbjct: 107 QQQQAKLSLQSWADVANITFTEVSGSQKANITFGNYSQDQYGNTDYDTQAYAWLPGSGNV 166
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDS 157
+ ++ HEIGHALGL HPG YN G D Y D+
Sbjct: 167 SGQSWYNINQSNIQHPASEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPSYKDVSYAEDT 226
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ--- 213
+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 227 RMFSLMSYWSETNTGGDNGGHYSAAPLLDDISAIQHLYGANMSTRTGDTVYGFNSNTGRD 286
Query: 214 ------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
I +D GG D D + + I+LN +S+S +GG + N++IA
Sbjct: 287 FLSTSSNAQKVIFAAWDGGGKDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIAAGVT 345
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+ +G SGNDV++GN ANN+ +GNDV G G D + + +
Sbjct: 346 IENAIGGSGNDVLVGNQANNLLKGGAGNDVLFGGGGAD--ELWGGAGSDIFVFAAASDSK 403
Query: 328 YDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
A + +DF ++++ F + +K A L +V +
Sbjct: 404 SGAADWIRDFQKGIDKIDLSFFNQGAEGADFIKFVDHFSGAAGEALLTYDATSNVSD 460
>gi|50236481|gb|AAT71322.1| metalloprotease [Pseudomonas fluorescens]
Length = 482
Score = 233 bits (593), Expect = 9e-59, Method: Composition-based stats.
Identities = 97/418 (23%), Positives = 160/418 (38%), Gaps = 41/418 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ A LLRD + F+ ++ +
Sbjct: 45 NGKPSFSVDQAATQLLRDGAAYKDLNGNGKIDLTYTFLTSASSSTMYKHGISGFSQFSAQ 104
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++ F E + D N + P + Y
Sbjct: 105 QKAQAVLAMQSWADVANVVFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 164
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 165 WYLINSSYTQNKNPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGNPSYKDASYGQDTRG 224
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 225 YSVMSYWSESNTSQNFSKGGVEAYSSGPLMDDIAAIQKLYGANYSTRAGDTTYGFNSNTG 284
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D GG+D LD + + I+LN S+S +GG N++IAQ
Sbjct: 285 RDFYSASSSSDKLVFSVWDGGGNDTLDFSGFTQNQK-INLNEASFSDVGGMVGNVSIAQG 343
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+E+ +G SGND++IGN+A NV +GND+ G+ G D + S +
Sbjct: 344 VTVENAIGGSGNDLLIGNNAANVLKGGAGNDIIFGAGGADQL--WGGSGSDTFVFAASTD 401
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
A + DF+S ++++ + + + L G
Sbjct: 402 SKPGAADQIMDFVSGLDKIDLSGFT-KGAGLHFVNAFTGATGDAILTTSGGVSTLSVD 458
>gi|164665001|gb|ABY65932.1| AprX [Pseudomonas fluorescens]
Length = 477
Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats.
Identities = 100/428 (23%), Positives = 167/428 (39%), Gaps = 41/428 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 38 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 97
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 98 QKAQAVLAMQSWADVANITFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 157
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 158 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGAPTYNDATYGQDTRG 217
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK 214
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 218 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNTG 277
Query: 215 DS---------PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D GG+D LD + + I+LN S+S +GG N++IA+
Sbjct: 278 RGFLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQK-INLNEASFSDVGGLVGNVSIAKG 336
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ G +GND++IGN+A N+ +GND+ G G D + + ++
Sbjct: 337 VTIENAFGGAGNDLIIGNNAANIIKGGAGNDLIYGGGGADQL--WGGAGNDTFVFGASSD 394
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A++ DF S +++ + + + A L G ++
Sbjct: 395 SKPGASDKIFDFTSGSDKIDLSGIT-KGAGLTFVNAFTGHAGDAVLTYAAGTNLGTLAVD 453
Query: 386 FYEFGLSE 393
F G+++
Sbjct: 454 FSGHGVAD 461
>gi|104780724|ref|YP_607222.1| alkaline metalloprotease precursor AprA [Pseudomonas entomophila
L48]
gi|95109711|emb|CAK14412.1| Alkaline metalloprotease precursor AprA [Pseudomonas entomophila
L48]
Length = 485
Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats.
Identities = 98/417 (23%), Positives = 164/417 (39%), Gaps = 40/417 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A++LLRD S F+ P + L ++ +
Sbjct: 43 NGKPSYTVDQAANYLLRDGAAWKDLNKDGTISLSYTFLTKAPSDFYSRGLG-TFSQFSDL 101
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPR---YDSRYFM 100
+ A+ A+ W+ V +TF E + D N + P +
Sbjct: 102 QKGQAKLAMQSWADVAKVTFTEAASGGDGHMTFGNFSASNGGAAFAYLPFDMPGSHKGES 161
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + G G HEIGH LGL HPG YN G D Y D+
Sbjct: 162 WYLINSSYQVNTTPGTGNYGRQTLTHEIGHVLGLSHPGDYNAGEGNPTYRDATYAQDTRG 221
Query: 160 TSVMSYFMPQDSMMD----ASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 222 YSVMSYWSESNTGQNFVKAGGQYYASAPLMDDIAAIQKLYGANYATRSGDTVYGFNSNAD 281
Query: 213 -------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
S + +++D GG+D D + + I+LN S+S +GG N++IA+
Sbjct: 282 RDFYSATSSSSKLVFSVWDGGGNDTFDFSGFTQNQK-INLNETSFSDVGGMIGNVSIAKG 340
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ G SGND++IGN+ NV +GND+ G G D + + + ++
Sbjct: 341 VTIENAFGGSGNDLLIGNALANVLKGGAGNDIIYGGGGADQLWGGTGADTFVFGAISDST 400
Query: 326 IVYDANEHKQDFLSD-VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D ++ + ++ + ++ + A L G ++
Sbjct: 401 KAAPDRIMDFTSGQDKIDLSAISAFAVNKLPLQFVNAFTGHAGEAVLSYDQGTNLGS 457
>gi|262093149|gb|ACY25898.1| alkaline metalloprotease [Flavobacterium sp. YS-80-122]
Length = 480
Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats.
Identities = 100/409 (24%), Positives = 167/409 (40%), Gaps = 44/409 (10%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP +T ++ AD L R W S F+ P + L + +
Sbjct: 43 NGKPSFTVDQAADQLTRSGASWYDLNGDGVINLSYTFLTSPPPGYASRGLG-TFSSFSGL 101
Query: 51 AQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFME 101
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 102 QKEQAKLSLESWADVAKVTFTEGPAARGDDGHMTFANFSASNGGAAFAYLPNSSRKGESW 161
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 162 YLINKDYDVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPSYRDAVYGEDTRAY 221
Query: 161 SVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ--- 212
SVMSY+ +++ + Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 222 SVMSYWSEKNTGQVFTKTGEGAYASAPLLDDIAAVQKLYGANMETRAGDTVYGFNSTADR 281
Query: 213 ------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D GG+D LD + + I+L S+S +GG N++IAQ
Sbjct: 282 DYYSATSATDKLIFSVWDGGGNDTLDFSGFSQNQK-INLAAGSFSDVGGMTGNVSIAQGV 340
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA-- 324
IE+ +G SGND+++GN+A+N+ +GND+ G G D + + S + ++
Sbjct: 341 TIENAIGGSGNDLLLGNAASNILKGGAGNDIIYGGGGADKLWGGSGSDTFVYREVSDSTP 400
Query: 325 ----IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ + L+ + L + +++ Y +
Sbjct: 401 KAADTLMDFQTGLDKIDLTGITHLSGLNFVNAFTGQAGDAVVSYNQASN 449
>gi|229590602|ref|YP_002872721.1| metalloprotease [Pseudomonas fluorescens SBW25]
gi|229362468|emb|CAY49374.1| metalloprotease [Pseudomonas fluorescens SBW25]
Length = 477
Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats.
Identities = 100/428 (23%), Positives = 167/428 (39%), Gaps = 41/428 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 38 NGKPSYTVDQAATQLLRDGATYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 97
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 98 QKAQAVLAMQSWADVANITFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 157
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 158 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGAPTYNDATYGQDTRG 217
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 218 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNTG 277
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D GG+D LD + + I+LN S+S +GG N++IA+
Sbjct: 278 RDFLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQK-INLNEASFSDVGGLVGNVSIAKG 336
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ G +GND++IGN+A N+ +GND+ G G D + + ++
Sbjct: 337 VTIENAFGGAGNDLIIGNNAANIIKGGAGNDLIYGGGGADQL--WGGAGNDTFVFGASSD 394
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A++ DF S +++ + + + A L G ++
Sbjct: 395 SKPGASDKIFDFTSGSDKIDLSGIT-KGAGLTFVNAFTGHAGDAVLTYAAGTNLGTLAVD 453
Query: 386 FYEFGLSE 393
F G+++
Sbjct: 454 FSGHGVAD 461
>gi|4063015|gb|AAD09851.1| protease PrtA [Pseudomonas fluorescens]
Length = 477
Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats.
Identities = 102/428 (23%), Positives = 168/428 (39%), Gaps = 41/428 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ +++A LLRD + F+ ++ N
Sbjct: 38 NGKPSYSVDQVATQLLRDGAAYRDVNGNGKIDLTYTFLTSASSSTLNKHGISGFSQFNAQ 97
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
++ A A+ WS V ++TF E + D N + P + Y
Sbjct: 98 QKDQAVLAMQSWSDVANVTFTEKATGGDTHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 157
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 158 WYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 217
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 218 YSVMSYWSESNTNQNFSKGGVEAYASGPLLDDIAAIQKLYGANYNTRAGDTTYGFNSNTG 277
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D GG+D LD + + I+LN S+S +GG N++IA+
Sbjct: 278 RDFYSATSNADKLVFSVWDGGGNDTLDFSGFTQNQK-INLNEASFSDVGGLVGNVSIAKG 336
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ G +GND++IGN+A NV +GND+ G G D + + ++
Sbjct: 337 VTIENAFGGAGNDLIIGNNAANVIKGGAGNDIIYGGGGADQL--WGGAGNDTFVFGSSSD 394
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF S +++ + + + A L G ++
Sbjct: 395 SKPGAADKIFDFTSGSDKIDLSGIT-KGAGLTFVNAFTGHAGDAVLTYAAGTNLGTLAVD 453
Query: 386 FYEFGLSE 393
F G+++
Sbjct: 454 FSGHGVAD 461
>gi|157833854|pdb|1SRP|A Chain A, Structural Analysis Of Serratia Protease
Length = 471
Score = 232 bits (591), Expect = 2e-58, Method: Composition-based stats.
Identities = 99/419 (23%), Positives = 162/419 (38%), Gaps = 54/419 (12%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++ E+ + R+ Q W+ Y + + T +++ +
Sbjct: 25 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 84
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L W+ V ++TF E + N Y P
Sbjct: 85 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIWQ 144
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 145 GQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDVTY 204
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 205 AEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNSN 264
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 265 TGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 323
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ANNV +GNDV G G D + +
Sbjct: 324 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGAD--ELWGGAGKDIFVFSAA 381
Query: 324 AIIVYDANEHKQDFLSDVERL------------RFADQCIDSVNVKQRSILEYTASYED 370
+ A++ +DF ++++ F ++L Y AS
Sbjct: 382 SDSAPGASDWIRDFQKGIDKIDLSFFNKEAQSSDFIHFVDHFSGAAGEALLSYNASNNV 440
>gi|271500593|ref|YP_003333618.1| Serralysin [Dickeya dadantii Ech586]
gi|270344148|gb|ACZ76913.1| Serralysin [Dickeya dadantii Ech586]
Length = 480
Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats.
Identities = 102/419 (24%), Positives = 159/419 (37%), Gaps = 40/419 (9%)
Query: 3 NIKPVYTTERIADH-LLR--------DQYWSNYFIRYKPDVLTTHRLSF--DITELNPNA 51
N KP Y+T++ L R + Y + Y T + + P
Sbjct: 42 NGKPSYSTDKAVSEGLTRPHTTWNGDNVYGKAANLTYSFLDTFTSTPNGHTGPVKFTPVQ 101
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRY 98
+ + +L W+ V +LTF E S +N Y P
Sbjct: 102 MDQVKLSLQSWADVANLTFTEVSPSQKANITFANYTRNADGSLNTDTQAYAAYPGTHP-L 160
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN--GGYPVYGVDNDYEND 156
F+ H HEIGHALGL HP YN G Y Y D
Sbjct: 161 SGSAWFNYNQSTVRNPDTEEYGRHTFTHEIGHALGLSHPAEYNAGEGDISYKNSAAYAED 220
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ-- 213
S S+MSY+ +++ D Y A P++ DI A+QK+YGA G+ +Y
Sbjct: 221 SRQFSIMSYWDVENTGGDFKGHYSAGPLMDDIAAIQKLYGANMTTRTGDTVYGFHSNTDR 280
Query: 214 -------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ +++D+GG+D D + + I+LN ++S +GG + N++IA
Sbjct: 281 DFYTATDSSKALVFSVWDAGGNDTFDFSGYSDNQ-RINLNEGAFSDVGGLKGNVSIAHGV 339
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GNSA+NV +GNDV GS G DT +
Sbjct: 340 TIENAIGGSGNDILVGNSADNVLQGGAGNDVLFGSVGADTL--TGGAGRDIFVYGSGQDS 397
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF + V+++ + + + L + H
Sbjct: 398 TLSAYDWITDFQTGVDKIDLSAFRSEGQLSFAQDQFSGKGQEIILQWDAADSITNLWLH 456
>gi|251789712|ref|YP_003004433.1| Serralysin [Dickeya zeae Ech1591]
gi|247538333|gb|ACT06954.1| Serralysin [Dickeya zeae Ech1591]
Length = 480
Score = 231 bits (588), Expect = 3e-58, Method: Composition-based stats.
Identities = 104/419 (24%), Positives = 159/419 (37%), Gaps = 40/419 (9%)
Query: 3 NIKPVYTTERIADH-LLR--------DQYWSNYFIRYKPDVLTTHRLSF--DITELNPNA 51
N KP Y+T++ + L R + Y + Y + + + P
Sbjct: 42 NGKPSYSTDKAVEEGLTRPHTTWNGDNVYGKAANLTYSFLNTFSSTPNGHTGPVKFTPVQ 101
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRY 98
+ + +L WS V +LTF E S + +N Y P
Sbjct: 102 MQQVKLSLQSWSDVANLTFTEVSPNQKANLTFANYTRNADGSIENDTQAYAAYPGQHP-L 160
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN--GGYPVYGVDNDYEND 156
F+ H HEIGH LGL HP YN G Y Y D
Sbjct: 161 SGSAWFNYNQPSIRNPDTDEYGRHTFTHEIGHTLGLSHPAEYNAGEGDISYKNSAAYAED 220
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ-- 213
S S+MSY+ +++ D Y A P++ DI A+QK+YGA G+++Y
Sbjct: 221 SRQFSIMSYWDVENTGGDFKGHYSAGPLMDDIAAIQKLYGANMTTRTGDSVYGFHSNTDR 280
Query: 214 -------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+GG+D D + + I+LN S S +GG + N++IA
Sbjct: 281 DFYTANNSSKALIFSVWDAGGNDTFDFSGYSNNQ-RINLNEGSLSDVGGLKGNVSIAHGV 339
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GN ANNV +G+DV GS+G DT +
Sbjct: 340 TIENAIGGSGNDLLVGNGANNVLQGGAGDDVLYGSTGADTLV--GGAGRDIFVYGSGQDS 397
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF S V+++ + + L V H
Sbjct: 398 TTSAYDWINDFQSGVDKIDLSAFRNGGQLSFVQDQFTGKGQEVMLQWDAASSVTNLWLH 456
>gi|1431808|pdb|1SMP|A Chain A, Crystal Structure Of A Complex Between Serratia Marcescens
Metallo-Protease And An Inhibitor From Erwinia
Chrysanthemi
Length = 471
Score = 231 bits (588), Expect = 4e-58, Method: Composition-based stats.
Identities = 100/421 (23%), Positives = 165/421 (39%), Gaps = 45/421 (10%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++ E+ + R+ Q W+ Y + + T +++ +
Sbjct: 25 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 84
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L W+ V ++TF E + N Y P
Sbjct: 85 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIWQ 144
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 145 GQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYNDVTY 204
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 205 AEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNSN 264
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 265 TGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 323
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ANNV +GNDV G G D + +
Sbjct: 324 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGAD--ELWGGAGKDIFVFSAA 381
Query: 324 AIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ A++ +DF ++++ F + S + TA L +V
Sbjct: 382 SDSAPGASDWIRDFQKGIDKIDLSFFNKEANSSDFIHFVDHFSGTAGEALLSYNASSNVT 441
Query: 381 E 381
+
Sbjct: 442 D 442
>gi|131089|sp|P19144|PRTX_ERWCH RecName: Full=Secreted protease C; Short=ProC; Flags: Precursor
gi|148490|gb|AAA24859.1| metalloprotease C [Erwinia chrysanthemi]
Length = 478
Score = 231 bits (588), Expect = 4e-58, Method: Composition-based stats.
Identities = 101/425 (23%), Positives = 162/425 (38%), Gaps = 39/425 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N KP Y+ E D + RD + + + +K D + N
Sbjct: 42 NGKPSYSIEDAGDQITRDNVSWNGANVFGKSANLTFKFLQSARSTPDGDTGFVKFNAAQI 101
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
A+ AL W+ V ++TF E + + N Y P S
Sbjct: 102 SQAKLALQSWADVANVTFTEVTGNQSANVTFGNYTRDSSGRLDYGTQAYAYLPGSGSASG 161
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
++ HEIGHALGL HPG YN G D Y D+
Sbjct: 162 TT-WYNYNVDNIRSPDTMEYGRQTLTHEIGHALGLNHPGDYNAGEGNPSYSDVTYAEDTR 220
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+MSY+ +++ D Y A PM+ DI A+Q++YGA G+++Y
Sbjct: 221 QFSIMSYWSEKNTGGDFKGHYAAGPMLDDIAAIQRLYGANMTTRTGDSVYGFNSNTDRDF 280
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I + +D+GG+D D + + I+LN S S +GG + N++IA+ I
Sbjct: 281 YTATSSSKALIFSAWDAGGNDTFDFSGYSNNQ-RINLNDGSLSDVGGLKGNVSIAEGVTI 339
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND++IGN+A+N +G+DV G SG D + S +
Sbjct: 340 ENAIGGSGNDLLIGNNADNTLRGGAGDDVLFGGSGADRLY--GGSGRDTFVYTAASDSKV 397
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
A + DF + +++ + N+ + + L + +
Sbjct: 398 AAPDWLLDFQTGADKIDLS-ALNTGNNLHFVNQFSGSGGEIMLNWDASANTSNLYLNLDN 456
Query: 389 FGLSE 393
E
Sbjct: 457 NTSPE 461
>gi|3114529|pdb|1AF0|A Chain A, Serratia Protease In Complex With Inhibitor
Length = 471
Score = 230 bits (587), Expect = 4e-58, Method: Composition-based stats.
Identities = 100/421 (23%), Positives = 165/421 (39%), Gaps = 45/421 (10%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++ E+ + R+ Q W+ Y + + T +++ +
Sbjct: 25 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 84
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L W+ V ++TF E + N Y P
Sbjct: 85 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIWQ 144
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 145 GQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGDPTYNDVTY 204
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 205 AEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNSN 264
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 265 TGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 323
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ANNV +GNDV G G D + +
Sbjct: 324 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGAD--ELWGGAGKDIFVFSAA 381
Query: 324 AIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ A++ +DF ++++ F + S + TA L +V
Sbjct: 382 SDSAPGASDWIRDFQKGIDKIDLSFFDKEANSSSFIHFVDHFSGTAGEALLSYNASSNVT 441
Query: 381 E 381
+
Sbjct: 442 D 442
>gi|60101756|gb|AAX13994.1| EprB [Erwinia chrysanthemi]
Length = 480
Score = 230 bits (586), Expect = 6e-58, Method: Composition-based stats.
Identities = 96/362 (26%), Positives = 152/362 (41%), Gaps = 38/362 (10%)
Query: 3 NIKPVYTTERIADH-LLR--------DQYWSNYFIRYKPDVLTTHRLSF--DITELNPNA 51
N KP Y+T++ + L R + Y + Y + + + P
Sbjct: 42 NGKPSYSTDKAVEEGLTRPHTTWNGDNVYGKAANLTYSFLNTFSSTPNGHTGPVKFTPVQ 101
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRY 98
+ + +L WS V +LTF E S + +N Y P
Sbjct: 102 MQQVKLSLQSWSDVANLTFTEVSPNQKANLTFANYTRNADGSIENDTQAYAAYPGQHP-L 160
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN--GGYPVYGVDNDYEND 156
F+ HEIGHALGL HP YN G Y Y D
Sbjct: 161 SGSAWFNYNQPSIRNPDTEEYGRQTFTHEIGHALGLSHPAEYNAGEGDISYKNSAVYAED 220
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ-- 213
S S+MSY+ +++ D Y A P++ DI A+QK+YGA G+++Y
Sbjct: 221 SRQFSIMSYWDIENTGGDFKGHYSAGPLMDDIAAIQKLYGANMTTRTGDSVYGFHSNTDR 280
Query: 214 -------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D+GG+D D + + I+LN S+S +GG + N++IA
Sbjct: 281 DFYTANDSSKALIFSVWDAGGNDTFDFSGYSNNQ-RINLNEGSFSDVGGLKGNVSIAHGV 339
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND+++GN A+NV +G+DV GS+G DT A +++ +++
Sbjct: 340 TIENAIGGSGNDLLVGNGADNVLQGGAGDDVLYGSTGADTLVGGAGRHIFVYGSGQDSTS 399
Query: 327 VY 328
Sbjct: 400 SV 401
>gi|284006975|emb|CBA72251.1| metalloprotease [Arsenophonus nasoniae]
Length = 508
Score = 230 bits (586), Expect = 7e-58, Method: Composition-based stats.
Identities = 90/343 (26%), Positives = 151/343 (44%), Gaps = 43/343 (12%)
Query: 5 KPVYTTERIADHLLRDQ-YWSN-------YFIRYKPDVLTTHRLSFDITELNPNAQEVAR 56
K Y ++ ++R Q W++ + Y + + +L Q+ AR
Sbjct: 15 KDSYDIDQAGQQIIRQQATWNSEQQIGQPAAVTYSFSRWQEYYTGY--HQLTEKQQQQAR 72
Query: 57 WALGEWSKVVDLTFEE-TSIHSDIKFIS----SNNGYVCTPRYDSRYFMEINFDKADVWR 111
AL W+ V ++TF E + ++I F + + P+ ++ +
Sbjct: 73 IALDSWADVANITFTEDATQTTNINFGNFHSMQGQAFAYLPQSGAQAGQCWFNAEDHPEN 132
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP-----------------VYGVDNDYE 154
G +HEIGHA+GL HPG YN Y + YE
Sbjct: 133 LDPQPGNYGRLVLVHEIGHAIGLSHPGDYNWASIDQQTQTLKWTRNTDSALSYSANAPYE 192
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQ 213
DS SVMSY+ + + Y + P++ DI AVQ +YGA G+++Y
Sbjct: 193 EDSRQFSVMSYWSEYHTGGNFHGHYASAPLIDDIAAVQALYGANMRTRTGDDVYGFNSTT 252
Query: 214 KDSPF---------IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ I +++D+GG+D LD + ++ I+LN ++S++GG+ KN++IA+
Sbjct: 253 NKDWYTISDPRIGCIFSVWDAGGNDTLDFSGYSKLQ-LINLNAGTFSNVGGWIKNVSIAK 311
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+TVIE+ G G D +IGNS +N+ +G D+ G G D
Sbjct: 312 NTVIENAFGGYGQDTIIGNSVDNIIKGGAGEDIIYGGLGQDIL 354
>gi|157833779|pdb|1SAT|A Chain A, Crystal Structure Of The 50 Kda Metallo Protease From S.
Marcescens
Length = 471
Score = 230 bits (585), Expect = 8e-58, Method: Composition-based stats.
Identities = 100/421 (23%), Positives = 165/421 (39%), Gaps = 45/421 (10%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++ E+ + R+ Q W+ Y + + T +++ +
Sbjct: 25 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 84
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L W+ V ++TF E + N Y P
Sbjct: 85 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIWQ 144
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 145 GQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGDPTYADVTY 204
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 205 AEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNSN 264
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 265 TGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 323
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G SGNDV++GN+ANNV +GNDV G G D + +
Sbjct: 324 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGAD--ELWGGAGKDIFVFSAA 381
Query: 324 AIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ A++ +DF ++++ F + S + TA L +V
Sbjct: 382 SDSAPGASDWIRDFQKGIDKIDLSFFDKEANSSSFIHFVDHFSGTAGEALLSYNASSNVT 441
Query: 381 E 381
+
Sbjct: 442 D 442
>gi|28948337|pdb|1G9K|A Chain A, Crystal Structure Of A Psychrophilic Alkaline Protease
From Pseudomonas Tac Ii 18
gi|34811434|pdb|1O0Q|A Chain A, Crystal Structure Of A Cold Adapted Alkaline Protease From
Pseudomonas Tac Ii 18, Co-Crystallized With 1 Mm Edta
gi|34811435|pdb|1O0T|A Chain A, Crystal Structure Of A Cold Adapted Alkaline Protease From
Pseudomonas Tac Ii 18, Co-Crystallized With 5 Mm Edta (5
Days)
gi|34811441|pdb|1OM6|A Chain A, Crystal Structure Of A Cold Adapted Alkaline Protease From
Pseudomonas Tac Ii 18, Co-Crystallized With 5mm Edta (2
Months)
gi|34811442|pdb|1OM7|A Chain A, Crystal Structure Of A Cold Adapted Alkaline Protease From
Pseudomonas Tac Ii 18, Soaked In 85 Mm Edta
gi|34811443|pdb|1OM8|A Chain A, Crystal Structure Of A Cold Adapted Alkaline Protease From
Pseudomonas Tac Ii 18, Co-Crystallyzed With 10 Mm Edta
gi|34811444|pdb|1OMJ|A Chain A, Crystal Structure Of A Psychrophilic Alkaline Protease
From Pseudomonas Tac Ii 18
Length = 463
Score = 229 bits (583), Expect = 2e-57, Method: Composition-based stats.
Identities = 101/401 (25%), Positives = 161/401 (40%), Gaps = 41/401 (10%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP +T +++AD L R W + F+ P + L ++ +
Sbjct: 26 NGKPSFTVDQVADQLTRSGASWHDLNNDGVINLTYTFLTAPPVGYASRGLG-TFSQFSAL 84
Query: 51 AQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFME 101
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 85 QKEQAKLSLESWADVAKVTFTEGPAARGDDGHMTFANFSASNGGAAFAYLPNSSRKGESW 144
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 145 YLINKDYQVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYAEDTRAY 204
Query: 161 SVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ--- 212
SVMSY+ +++ + Y + P++ DI AVQK+YGA + + +Y
Sbjct: 205 SVMSYWSEKNTGQVFTKTGEGAYASAPLLDDIAAVQKLYGANLETRADDTVYGFNSTADR 264
Query: 213 ------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D GG+D LD + + I+L S+S +GG N++IAQ
Sbjct: 265 DFYSATSSTDKLIFSVWDGGGNDTLDFSGFSQNQK-INLTAGSFSDVGGMTGNVSIAQGV 323
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND++IGN A NV +GND+ G G D + + +
Sbjct: 324 TIENAIGGSGNDLLIGNDAANVLKGGAGNDIIYGGGGAD--VLWGGTGSDTFVFGAVSDS 381
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A + +DF S +++ + A
Sbjct: 382 TPKAADIIKDFQSGFDKIDLTAIT-KLGGLNFVDAFTGHAG 421
>gi|271500588|ref|YP_003333613.1| Serralysin [Dickeya dadantii Ech586]
gi|270344143|gb|ACZ76908.1| Serralysin [Dickeya dadantii Ech586]
Length = 477
Score = 228 bits (582), Expect = 2e-57, Method: Composition-based stats.
Identities = 96/410 (23%), Positives = 154/410 (37%), Gaps = 44/410 (10%)
Query: 4 IKPVYTTERIADHLLRD-------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
KP YT E+ D + R + F++ D + N
Sbjct: 40 DKPSYTLEQARDQITRGNVTWNGDHVFGKPVALTYAFLQSVSDANMPDNYK-GFVKFNAA 98
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSR 97
+ AR AL W+ V ++TF E N + P +
Sbjct: 99 QIQQARLALQSWADVANVTFTEVKNPQQATIKFGNYTLTSDGHTDNNSQAFGFYPGNW-K 157
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYEND 156
+ F+ + HEIGH LGL HPG Y+ G D Y D
Sbjct: 158 WAGSAWFNYNQADNQRPDINEFGRNTLAHEIGHTLGLYHPGDYDASDGNPGYKDVTYAED 217
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKD 215
+ S+MSY+ + D + A P++ DI A+QK+YGA G+ +Y
Sbjct: 218 TRQFSIMSYWNEGYTGGDFHGYHAAAPLMDDIAAIQKLYGANMTTRTGDTVYGFHSNAGR 277
Query: 216 ---------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+P I +++D+GG+D D + + I L + ++S +GG + N++IA
Sbjct: 278 DFYTATDSKTPLIFSVWDAGGNDTFDFSGYSSNQ-RISLISGTFSDVGGLKGNVSIAAGA 336
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
VIE+ +G SGNDV++GN ++N +GNDV G G D +
Sbjct: 337 VIENAIGGSGNDVIVGNLSDNRIDGGAGNDVLYGDGGADIL--TGGAGKDIFVYAWEKDS 394
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ A + DF +++ + + A E L+ G
Sbjct: 395 LASAPDTITDFQRGEDKIDLSAFNKNHDLQFVD--HFSGAGNEVLLNWDG 442
>gi|47591|emb|CAA27738.1| unnamed protein product [Serratia sp.]
Length = 486
Score = 228 bits (582), Expect = 2e-57, Method: Composition-based stats.
Identities = 94/419 (22%), Positives = 158/419 (37%), Gaps = 55/419 (13%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYF-------IRYKPDVL----TTHRLSFDITELNPN 50
N K ++ E+ + R+ Q W+ Y + + T +++ +
Sbjct: 41 NGKDSFSNEQAGLFITRENQTWNGYKVFGQPVKLTFSFPDYKFSSTNVAGDTGLSKFSAE 100
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRY--- 94
Q+ A+ +L W+ V ++TF E + N Y P
Sbjct: 101 QQQQAKLSLQSWADVANITFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIWQ 160
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ ++ HEIGHALGL HPG YN G D Y
Sbjct: 161 GQDLGGQTWYNVNQSNVKHPATEDYGRQTFTHEIGHALGLSHPGDYNAGEGNPTYRDVTY 220
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ S+MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 221 AEDTRQFSLMSYWSETNTGGDNGGHYAAAPLLDDIAAIQHLYGANLSTRTGDTVYGFNSN 280
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I +D+GG+D D + + I+LN +S+S +GG + N++IA
Sbjct: 281 TGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQ-RINLNEKSFSDVGGLKGNVSIA 339
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE+ +G +++GN+ANNV +GNDV G G D + +
Sbjct: 340 AGVTIENAIG-FRQRLIVGNAANNVLKGGAGNDVLFGGGGAD--ELWGGAGKDIFVFSAA 396
Query: 324 AIIVYDANEHKQDFLSDVERL------------RFADQCIDSVNVKQRSILEYTASYED 370
+ A++ +DF ++++ F ++L Y AS
Sbjct: 397 SDSAPGASDWIRDFQKGIDKIDLSFFNKEAQSSDFIHFVDHFSGAAGEALLSYNASNNV 455
>gi|3646411|emb|CAA07697.1| metalloprotease [Pseudomonas tolaasii]
Length = 477
Score = 228 bits (582), Expect = 2e-57, Method: Composition-based stats.
Identities = 99/428 (23%), Positives = 167/428 (39%), Gaps = 41/428 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP +T ++ ADHLLRD + F+ ++ N
Sbjct: 38 NGKPSWTVDQAADHLLRDGASYKELNHNGKIDLTYTFLTSATTATMNKHGISGFSQFNAQ 97
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYV--------CTPRYDSRYFMEI 102
+ A A+ W+ V +++F E++ D +N P + Y
Sbjct: 98 QKAQAVLAMQSWADVANVSFTESASGGDTHMTFANYSGGQAGAAAFAYLPGTGAGYDGTS 157
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D DY D+
Sbjct: 158 WYLTNSSYTVNKTPDVNNYGRQTLTHEIGHTLGLAHPGDYNAGTGNPTYKDADYGQDTRG 217
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 218 YSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRAGDTTYGFNSNTG 277
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D GG+D LD + + I+L S+ +GG N++I +
Sbjct: 278 RDFYSATSNADKLVFSVWDGGGNDTLDFSGFTQNQK-INLTEGSFFDVGGLVGNVSIGKG 336
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+E+ G SGND++IGN+A N+ +GND+ G G D + + ++
Sbjct: 337 VTVENAFGGSGNDLIIGNNAVNIIKGGAGNDIIYGGGGADQL--WGGAGNDTFVLGASSN 394
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF S +++ + + + A L G ++
Sbjct: 395 SGPGAPDKIFDFTSGSDKIDLSGIT-KGAGLTFVNAFTGHAGDAVLSYAAGTNLGTLAVD 453
Query: 386 FYEFGLSE 393
F G+++
Sbjct: 454 FSGHGVAD 461
>gi|5733435|gb|AAD49575.1|AF141295_1 metalloprotease [Pectobacterium carotovorum subsp. carotovorum]
Length = 473
Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats.
Identities = 102/413 (24%), Positives = 160/413 (38%), Gaps = 40/413 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N KP +T++ A ++RD + + + Y S D + + +
Sbjct: 38 NGKPSFTSDLAAKEIVRDGLTWNGTNVFGKSANLTYSFLQNVKSIPSGDQGFVKFSAAQE 97
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
A+ +L WS V +LTF E S N Y P S
Sbjct: 98 HQAKLSLQSWSDVANLTFTEVSPTQKATITFGNYTRDSSGKMDYDTQAYAYMPGNHSA-A 156
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
F+ HEIGHALGL HPGSYN G D Y D+
Sbjct: 157 GSAWFNYNAETVRDPTT-EYGKQTLTHEIGHALGLNHPGSYNAGEGDPTYRDVTYAEDTR 215
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ----- 212
S+MSY+ Q++ D + Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 216 QFSLMSYWSEQNTGGDFQWHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNADRDF 275
Query: 213 ----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG+D D + I+L +S +GG + N++IA I
Sbjct: 276 YSAHSNSDKLIFSVWDAGGNDTFDFSGY-RDDQRINLTEGGFSDVGGLKGNVSIAHGVTI 334
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND++IGN ANN+ +GNDV G G D + + Y
Sbjct: 335 ENAIGGSGNDIIIGNDANNILQGGAGNDVIYGGGGADIL--TGGAGKDIFVYASASDSSY 392
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ DF ++++ + + ++ L + L G +
Sbjct: 393 KSGYDITDFQRGIDKIDLS-ALNPNKDLHFVDALTGLGNEVLLDWDAGSNTTN 444
>gi|119383574|ref|YP_914630.1| peptidase domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119373341|gb|ABL68934.1| peptidase domain protein [Paracoccus denitrificans PD1222]
Length = 820
Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats.
Identities = 142/605 (23%), Positives = 219/605 (36%), Gaps = 53/605 (8%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+T IA L + + R DV L+ D++ L +++A AL W++V
Sbjct: 150 FTMAEIALQLTDGYWEATGRSRRAFDVGQGDVLNVDLSGLTQEGRQLAGMALSAWAQVTG 209
Query: 68 LTFEE---TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSH 122
+ F T+ I F S+ G + + + + W YG G +
Sbjct: 210 IVFNRNPGTNATIHITFDDSDWGAWSSSMTSGDRIVSSHVNIGLDWLISYGTGYNSYSYQ 269
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCA 181
+HEIGHALGL H G+YN G V GV+N Y NDS+ SVMSYF ++ +DASF Y A
Sbjct: 270 TYIHEIGHALGLGHAGNYN-GSAVLGVNNHYLNDSWQASVMSYFDQAENVWVDASFAYIA 328
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK---------------DSPFIQTIYDSG 226
+PM +DI+A+Q++YG GNN Y TI+D G
Sbjct: 329 SPMTADILAIQRLYGPTAIRTGNNTYGETTNAGPSYATIAALLRNADTRDDIAFTIFDQG 388
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D+LDL + I L + S+ G N++I T+IE+ GND+VIGN A+
Sbjct: 389 GVDMLDLGTDTRGQ-RISLVAGTSSNAYGLVGNISIMPGTLIENAQAGRGNDLVIGNWAD 447
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSY------LYKIYRFENAIIVYDANEHKQDFLSD 340
N+ +GND G++G DT + +Y + + +A D +
Sbjct: 448 NILRGGAGNDTLRGAAGNDTLNGQGGADRLVGGVGDDVYVTDGRDQIVEAAGQGIDTVRS 507
Query: 341 VERLRF----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
L+ ++ D + L A L G D +
Sbjct: 508 TVTLQLGANLENLVLISNAAQDGGGNALANRLTGNAHANRLEGFSGNDTLLGGQGNDTLY 567
Query: 391 LSEGRDITFD----SYLYLGSYDDLRNVFGSDRGA---AARHYITHGVKEGRNPDAFKAL 443
G D+ L G+ +D+ + + A + R
Sbjct: 568 GGNGWDVLGGGAGADLLIGGNGNDILRGWTGNDTLRGGAGNDTLNGQGGADRLEGGAGDD 627
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
Y+ D I A E + ++ + G+
Sbjct: 628 VYVTDGRDQIVEAAGQGIDTVRSTVTLRLGANLENLVLISNAAQDGSGNGLANRLTGNAH 687
Query: 504 GAAARHYITHGVKEGRNPDAF-------KALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
+ + GR + LE A + L+ D L AG DHF
Sbjct: 688 ANRLEGFFGNDTLLGRQGNDLLFGGQGDDWLEGGAGADLLVGGQGDDTMLGGAGADHFVF 747
Query: 557 FGYEE 561
G +
Sbjct: 748 QGGRD 752
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 76/272 (27%), Gaps = 29/272 (10%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ T+ G+D L GG + + G N + T +++ G
Sbjct: 549 EGFSGNDTLLGGQGNDTL----YGGNGWDVLGGGAGADLLIGGNGNDILRGWTGNDTLRG 604
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDG----------SSGLDTF---------------F 308
+GND + G + +G+DV+ G+DT
Sbjct: 605 GAGNDTLNGQGGADRLEGGAGDDVYVTDGRDQIVEAAGQGIDTVRSTVTLRLGANLENLV 664
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + +A+ ++ + + L + LE A
Sbjct: 665 LISNAAQDGSGNGLANRLTGNAHANRLEGFFGNDTLLGRQGNDLLFGGQGDDWLEGGAGA 724
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L+ G D F GRD+ D L + ++G + A+
Sbjct: 725 DLLVGGQGDDTMLGGAGADHFVFQGGRDVVGDFQDDLDTLRIDDALWGGGPRSVAQVLQL 784
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
V G F + + A
Sbjct: 785 AHVAGGNTVFDFGNGNVLTLNGFANIAALQDD 816
>gi|312960983|ref|ZP_07775488.1| serralysin [Pseudomonas fluorescens WH6]
gi|311284641|gb|EFQ63217.1| serralysin [Pseudomonas fluorescens WH6]
Length = 477
Score = 228 bits (580), Expect = 3e-57, Method: Composition-based stats.
Identities = 99/428 (23%), Positives = 165/428 (38%), Gaps = 41/428 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 38 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSATLNKHGISGFSQFNAQ 97
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++ F E + D N + P + Y
Sbjct: 98 QKAQAVLAMQSWADVANVAFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 157
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 158 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGAPTYNDATYGQDTRG 217
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 218 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNTG 277
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D GG+D LD + + I+LN S+S +GG N++IA+
Sbjct: 278 RDFLSAGSNADKLVFSVWDGGGNDTLDFSGFTQNQK-INLNETSFSDVGGLVGNVSIAKG 336
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+E+ G +GND++IGN+A NV +GND+ G G D + + ++
Sbjct: 337 VTVENAFGGAGNDLIIGNNAANVIKGGAGNDLIYGGGGADQL--WGGAGSDTFVFGASSD 394
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF S +++ + + + A L G ++
Sbjct: 395 SRPGAADKLLDFTSGSDKIDLSGIT-KGAGLSFVNAFTGHAGDAVLSYAAGTNLGTLAVD 453
Query: 386 FYEFGLSE 393
F G+++
Sbjct: 454 FSGHGVAD 461
>gi|50121709|ref|YP_050876.1| metalloprotease [Pectobacterium atrosepticum SCRI1043]
gi|49612235|emb|CAG75685.1| metalloprotease [Pectobacterium atrosepticum SCRI1043]
Length = 469
Score = 228 bits (580), Expect = 3e-57, Method: Composition-based stats.
Identities = 107/418 (25%), Positives = 166/418 (39%), Gaps = 40/418 (9%)
Query: 4 IKPVYTTERIADHLLR-DQYWSNYF-------IRYKPDVLTTHRLSFD--ITELNPNAQE 53
KP +T+E+ ++R W+ + Y S D + + ++
Sbjct: 43 GKPSFTSEQAGWQIVRDGLTWNGTNVFGKSADLTYSFLQNVKSIPSGDQGFVKFSAAQEQ 102
Query: 54 VARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYFM 100
A+ +L WS V +LTF + S N Y P S
Sbjct: 103 QAKLSLQSWSDVANLTFTQVSPTQKATITFGNYTRDSSGRMDYDTQAYAYMPGNHSA-AG 161
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
F+ HEIGHALGL HPG YN G D Y D+
Sbjct: 162 SAWFNYNADTVRNPAT-EYGKQTLTHEIGHALGLNHPGDYNAGEGNPTYRDVTYAEDTRQ 220
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ----- 213
S+MSY+ Q++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 221 YSLMSYWSEQNTGGDFKGHYAAGPLIDDIAAIQLLYGANMDTRTGDTVYGFNSNTGRDFY 280
Query: 214 ----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
I +++D+GG+D D + + IDLN +S +GG + N++IA IE
Sbjct: 281 TTNSNSQKLIFSVWDAGGNDTFDFSGYKDNQ-IIDLNEGRFSDVGGLKGNVSIAHGVTIE 339
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ +G SGND++IGNSA+N+ +G D G +G D F Y + S ++ I +
Sbjct: 340 NAIGGSGNDIIIGNSADNILQGGAGADTLTGGAGKDIFVYASASDSSNTTGYD-TITDFQ 398
Query: 330 ANEHKQDF--LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
K D L+ + L+F D N + + + GQ + + H
Sbjct: 399 RGIDKIDLSALNQNKDLQFVDSFTGLGNEALLDWDAGSNTTNLWLNFAGQTTPDFLVH 456
>gi|261822160|ref|YP_003260266.1| Serralysin [Pectobacterium wasabiae WPP163]
gi|261606173|gb|ACX88659.1| Serralysin [Pectobacterium wasabiae WPP163]
Length = 474
Score = 228 bits (580), Expect = 3e-57, Method: Composition-based stats.
Identities = 103/413 (24%), Positives = 163/413 (39%), Gaps = 39/413 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N KP +T++ A ++RD + + + Y S D + + +
Sbjct: 38 NGKPSFTSDLAAKEIVRDGLTWNGTNVFGKSANLTYSFLQNVKSIPSGDQGFVKFSAAQE 97
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
A+ +L WS V +LTF E S N Y P S
Sbjct: 98 HQAKLSLQSWSDVANLTFTEVSPTQKATITFGNYTRDSSGKMDYDTQAYAYMPGNHSA-A 156
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
F+ HEIGHALGL HPGSYN G D Y D+
Sbjct: 157 GSAWFNYNAETVRDPTT-EYGKQTLTHEIGHALGLNHPGSYNAGEGDPTYRDVTYAEDTR 215
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ----- 212
S+MSY+ Q++ D + Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 216 QFSLMSYWSEQNTGGDFQWHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNADRDF 275
Query: 213 ----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG+D D + I+L +S +GG + N++IA I
Sbjct: 276 YSAHSNSDKLIFSVWDAGGNDTFDFSGY-RDDQRINLTEGGFSDVGGLKGNVSIAHGVTI 334
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND++IGN ANN+ +GNDV G G D A ++ +Y +
Sbjct: 335 ENAIGGSGNDIIIGNDANNILQGGAGNDVIYGGGGADILTGGAGKDIF-VYASASDSSYK 393
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ DF ++++ + + ++ L + L G +
Sbjct: 394 SGYDIITDFQRGIDKIDLS-ALNPNKDLHFVDALTGLGNEVLLDWDAGSNTTN 445
>gi|70729851|ref|YP_259590.1| protease PrtA [Pseudomonas fluorescens Pf-5]
gi|68344150|gb|AAY91756.1| protease PrtA [Pseudomonas fluorescens Pf-5]
Length = 515
Score = 227 bits (579), Expect = 4e-57, Method: Composition-based stats.
Identities = 107/399 (26%), Positives = 170/399 (42%), Gaps = 52/399 (13%)
Query: 3 NIKPVYTTERIADHLLR-DQYWS-----------NYFIRYKPDVLTTHRLSFDITELNPN 50
N KP +T ++ AD +LR W F+ KP SF +E +
Sbjct: 76 NGKPSFTADQAADSILRKGLSWHDQNGDGKIDLSYSFLTEKPANYNPALGSF--SEFSAL 133
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------GYVCTPRYDSRYFMEIN 103
+ A +L W+ V ++TF E + D N + P S Y +
Sbjct: 134 QKAQALLSLQSWADVANVTFTEAAKGGDGHMSFGNYNVSTGGAAFAYLPSGSS-YDGQSW 192
Query: 104 FDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP-VYGVDNDYENDSFLT 160
+ D + G G HEIGH+LGL HPG YN G D Y D+
Sbjct: 193 YLINDQYRVNETPGNGNYGRQTLTHEIGHSLGLSHPGVYNAGSGSPTYNDVTYAQDTRGY 252
Query: 161 SVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK- 214
S+MSY+ ++ D S Y + P++ DIVAVQK+YGA + + +Y
Sbjct: 253 SLMSYWSESNTGQDFSKDGGGAYASAPLLDDIVAVQKLYGANLETRADDTVYGFNSNTGR 312
Query: 215 --------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ ++D GG+D LD + + I+LN +S +GG N++IA
Sbjct: 313 DFYSAHSASDKLVFAVWDGGGNDTLDFSGFTQNQK-INLNEGGFSDVGGLVGNVSIAHGV 371
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYLYK 317
+E+ +G SGND++IGN+A N+ +GND+ G +G DTF Y +
Sbjct: 372 TVENAIGGSGNDLLIGNAAANILEGGAGNDIIYGGGGGDTLWGGAGADTFVY--GAAADS 429
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + I+ + + E K D L+ + + ++ V+
Sbjct: 430 TFDAPDWIMDFVSGEDKID-LTGIPQFASGGATLNFVSG 467
>gi|541038|pir||JN0892 metalloproteinase (EC 3.4.24.-) B - Erwinia chrysanthemi
Length = 478
Score = 227 bits (578), Expect = 5e-57, Method: Composition-based stats.
Identities = 98/416 (23%), Positives = 160/416 (38%), Gaps = 37/416 (8%)
Query: 3 NIKPVYTTERIADHLLRDQYWSNYF-------IRYKPDVLTTHRLSFD--ITELNPNAQE 53
N K Y+ + A + W+ + +K T + D + N
Sbjct: 43 NGKTSYSADHAAQITRENVSWNGTNVFGKSANLTFKFLQSATSTPAGDKGFVKFNAEQIA 102
Query: 54 VARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYFM 100
+ AL W+ V +LTF E + + N Y P + +
Sbjct: 103 QTKLALQSWADVANLTFTEVTGNKSANLTFGNYTRDASGNLDYGTQAYAYYP-GNYQGAG 161
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
++ G HEIGHALGL HPG YN G D Y DS+
Sbjct: 162 SSWYNYNQSNIRSPGTEEYGRQTLTHEIGHALGLAHPGEYNAGEGDPSYNDAVYAEDSYQ 221
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ----- 213
S+MSY+ ++ D + Y PM+ DI A+Q++YGA G+++Y
Sbjct: 222 FSIMSYWGENETGADYNGHYGGAPMIDDIAAIQRLYGANMTTRTGDSVYGFHSNTDRDFY 281
Query: 214 ----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
I +++D+GG+D D + + I+LN S+S +GG + N++IA IE
Sbjct: 282 TANDSSKALIFSVWDAGGNDTFDFSGYSNNQ-RINLNEGSFSDVGGLKGNVSIAHGVTIE 340
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ +G SGND+++GN A+NV +GND+ G++G DT +
Sbjct: 341 NAIGGSGNDLLVGNGADNVLQGGAGNDILYGAAGADTL--SGGAGRDTFVYGSGQDSTVS 398
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF S +++ + + + L + H
Sbjct: 399 AYDWINDFQSGADKIDLSAFRNEGQLSFVQDQFTGKGQEVMLQWDAANSITNLWLH 454
>gi|28948368|pdb|1H71|P Chain P, Psychrophilic Protease From Pseudoalteromonas 'tac Ii 18'
Length = 463
Score = 226 bits (577), Expect = 6e-57, Method: Composition-based stats.
Identities = 101/401 (25%), Positives = 161/401 (40%), Gaps = 41/401 (10%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP +T +++AD L R W + F+ P + L ++ +
Sbjct: 26 NGKPSFTVDQVADQLTRSGASWHDLNNDGVINLTYTFLTAPPVGYASRGLG-TFSQFSAL 84
Query: 51 AQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFME 101
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 85 QKEQAKLSLESWADVAKVTFTEGPAARGDDGHQTFANFSASNGGAAFAYLPNSSRKGESW 144
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 145 YLINKDYQVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYAEDTRAY 204
Query: 161 SVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ--- 212
SVMSY+ +++ + Y + P++ DI AVQK+YGA + + +Y
Sbjct: 205 SVMSYWSEKNTGQVFTKTGEGAYASAPLLDDIAAVQKLYGANLETRADDTVYGFNSTADR 264
Query: 213 ------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +++D GG+D LD + + I+L S+S +GG N++IAQ
Sbjct: 265 DFYSATSSTDKLIFSVWDGGGNDTLDFSGFSQNQK-INLTAGSFSDVGGMTGNVSIAQGV 323
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE+ +G SGND++IGN A NV +GND+ G G D + + +
Sbjct: 324 TIENAIGGSGNDLLIGNDAANVLKGGAGNDIIYGGGGAD--VLWGGTGSDTFVFGAVSDS 381
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A + +DF S +++ + A
Sbjct: 382 TPKAADIIKDFQSGFDKIDLTAIT-KLGGLNFVDAFTGHAG 421
>gi|227113041|ref|ZP_03826697.1| metalloprotease [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 476
Score = 226 bits (577), Expect = 7e-57, Method: Composition-based stats.
Identities = 99/413 (23%), Positives = 165/413 (39%), Gaps = 39/413 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N KP +T++ A ++RD + + + Y S D + + +
Sbjct: 40 NGKPSFTSDLAAKEIVRDGLTWNGTNVFGKSANLTYSFLQNVRSIPSGDQGFVKFSAAQE 99
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
+ A+ +L WS V ++TF + S N Y P S
Sbjct: 100 QQAKLSLQSWSDVANITFTQVSPTQKATITFGNYTRDSSGRMDYDTQAYAYMPGNHSA-A 158
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
F+ HEIGHALGL HPG YN G D Y D+
Sbjct: 159 GSAWFNYNSDTVRNPAT-EYGKQTLTHEIGHALGLNHPGDYNAGEGNPTYRDVTYAEDTR 217
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+MSY+ Q++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 218 QFSLMSYWSEQNTGGDFQGHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNTGRDF 277
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG+D D + I+LN +S +GG + N++IA I
Sbjct: 278 YTTTSNSQKLIFSVWDAGGNDTFDFSGY-RNDQRINLNEGGFSDVGGLKGNVSIAHGVTI 336
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND++IGN ANN+ +G+DV G G DT A ++ +Y +
Sbjct: 337 ENAIGGSGNDIIIGNDANNILNGGAGDDVIYGGGGADTLTGGAGKDIF-VYASASDSSYK 395
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + DF ++++ + +++ + + L + +
Sbjct: 396 NGYDTITDFQRGIDKIDLS-ALNQKGDLQFVNTFTGLGNEALLNWDAESNTTD 447
>gi|31335337|gb|AAP44489.1| extracellular alkaline metalloprotease [Pseudomonas fluorescens]
Length = 477
Score = 226 bits (577), Expect = 8e-57, Method: Composition-based stats.
Identities = 99/428 (23%), Positives = 161/428 (37%), Gaps = 41/428 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 38 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 97
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 98 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 157
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 158 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 217
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 218 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDTTYGFNSNTG 277
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D GG+D LD + + I+L S+S +GG N++IA+
Sbjct: 278 RDFLSASSNADKLVFSVWDGGGNDTLDFSGFTQNQK-INLTATSFSDVGGLVGNVSIAKG 336
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ G SGND++IGN N +GND+ G G D + + ++
Sbjct: 337 VTIENAFGGSGNDLIIGNQVANTIKGGAGNDLIYGGGGADQL--WGGTGSDTFVYGASSD 394
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF S +++ + V + A L G ++
Sbjct: 395 SRPGAADKIFDFTSGSDKIDLSGIT-KGAGVTFVNAFTGHAGDAVLTYASGTNLGTLAVD 453
Query: 386 FYEFGLSE 393
F G+++
Sbjct: 454 FSGHGVAD 461
>gi|312174231|emb|CBX82484.1| zinc-binding metalloprotease PrtA [Erwinia amylovora ATCC BAA-2158]
Length = 478
Score = 226 bits (576), Expect = 8e-57, Method: Composition-based stats.
Identities = 94/356 (26%), Positives = 146/356 (41%), Gaps = 41/356 (11%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIR-------YKPDVLTTHRLSFDI----TELNPN 50
N K Y ++ + R Q W+ + Y + +F+ + NP
Sbjct: 31 NNKTSYDIDQAGKEIARGEQSWNGVHVTDKGATVTYSFPSWEPGKKNFNGDTIHSAFNPE 90
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------NGYVCTPRY---------- 94
Q + +L WS V ++ F E S N Y P+
Sbjct: 91 QQAQTKLSLQSWSDVANIKFVEVSGDQYSNITFGNIVAPDTQAYAMLPQSTDNGKIIYDD 150
Query: 95 -DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDND 152
+ + +D G HEIGH LGL HPG YN G D
Sbjct: 151 RSYDISGQSWYSTSDPENLAPELGNYGRLTLTHEIGHTLGLNHPGDYNAGEGNPSYADAT 210
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEV 211
Y DS S MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 211 YAEDSRQFSDMSYWNEPNTGGDNGGNYSAAPLIDDIAAIQHLYGANMTTRTGDTVYGFHS 270
Query: 212 QQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ I ++D+GG+D LD + + I+LN S+S +GG + N++I
Sbjct: 271 NTDRDFYTAKDSNQKLIFAVWDAGGNDTLDFSGYSQNQ-RINLNEGSFSDVGGLKGNISI 329
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
A IE+ +G +GNDV++GN+A+NV +GNDV G G D + + + ++
Sbjct: 330 AAGATIENAIGGAGNDVIVGNAADNVIKGGAGNDVIYGGGGQDQLWGGSGNDIFVF 385
>gi|152986695|ref|YP_001349497.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa PA7]
gi|150961853|gb|ABR83878.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa PA7]
Length = 479
Score = 226 bits (576), Expect = 8e-57, Method: Composition-based stats.
Identities = 92/385 (23%), Positives = 154/385 (40%), Gaps = 42/385 (10%)
Query: 3 NIKPVYTTERIADHLLRDQ------------YWSNYFIRYKPD------VLTTHRLSFD- 43
N P YT ++ AD +LR+ S F+ D + S
Sbjct: 34 NGHPSYTVDQAADQILRENAAWQKAPGDSVLTLSYSFLTKPNDFFNSPWKYVSDIYSLGK 93
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDS 96
+ + Q + +L WS V + F + + N + P
Sbjct: 94 FSAFSAQQQAQTKLSLQSWSDVAKINFVDAGQGEQGDLVFGNFSSSVGGAAFAFLPDVQD 153
Query: 97 RYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ + + + G HEIGH LGL HPG YN G D Y
Sbjct: 154 ALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATY 213
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ SVMSY+ Q++ D Y + P++ DI A+Q++YGA G+ +Y
Sbjct: 214 AEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQQLYGANLTTRTGDTVYGFNSN 273
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
S + +++D+GG+D LD + + I+LN ++ S +GG + N++IA
Sbjct: 274 TERDFYSATSSTSKLVFSVWDAGGNDTLDFSGFSQNQK-INLNEKALSDVGGLKGNVSIA 332
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+E+ +G SG+D+++GN NV +GND+ G G D + S
Sbjct: 333 AGATVENAIGGSGSDLLVGNQVANVLKGGAGNDILYGGLGADQL--WGGSGADTFVYGAI 390
Query: 324 AIIVYDANEHKQDFLSDVERLRFAD 348
A + +DF+S +++ +
Sbjct: 391 DESSAAAPDTLRDFVSGQDKIDLSG 415
>gi|292490040|ref|YP_003532934.1| zinc-binding metalloprotease PrtA [Erwinia amylovora CFBP1430]
gi|292901057|ref|YP_003540426.1| zinc-binding metalloprotease [Erwinia amylovora ATCC 49946]
gi|4826415|emb|CAB42873.1| zinc-binding metalloprotease [Erwinia amylovora]
gi|291200905|emb|CBJ48042.1| zinc-binding metalloprotease [Erwinia amylovora ATCC 49946]
gi|291555481|emb|CBA23978.1| zinc-binding metalloprotease PrtA [Erwinia amylovora CFBP1430]
Length = 478
Score = 226 bits (576), Expect = 8e-57, Method: Composition-based stats.
Identities = 94/356 (26%), Positives = 146/356 (41%), Gaps = 41/356 (11%)
Query: 3 NIKPVYTTERIADHLLRD-QYWSNYFIR-------YKPDVLTTHRLSFDI----TELNPN 50
N K Y ++ + R Q W+ + Y + +F+ + NP
Sbjct: 31 NNKTSYDIDQAGKEIARGEQSWNGVHVTDKGATVTYSFPSWEPGKKNFNGDTIHSAFNPE 90
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN------NGYVCTPRYDS-------- 96
Q + +L WS V ++ F E S N Y P+
Sbjct: 91 QQAQTKLSLQSWSDVANIKFVEVSGDQYSNITFGNIVAPDTQAYAMLPQSTDNGKIIYDD 150
Query: 97 ---RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDND 152
+ + +D G HEIGH LGL HPG YN G D
Sbjct: 151 RSFDISGQSWYSTSDPENLAPELGNYGRLTLTHEIGHTLGLNHPGDYNAGEGNPSYADAT 210
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEV 211
Y DS S MSY+ ++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 211 YAEDSRQFSDMSYWNEPNTGGDNGGNYSAAPLIDDIAAIQHLYGANMTTRTGDTVYGFHS 270
Query: 212 QQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ I ++D+GG+D LD + + I+LN S+S +GG + N++I
Sbjct: 271 NTDRDFYTAKDSNQKLIFAVWDAGGNDTLDFSGYSQNQ-RINLNEGSFSDVGGLKGNISI 329
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
A IE+ +G +GNDV++GN+A+NV +GNDV G G D + + + ++
Sbjct: 330 AAGATIENAIGGAGNDVIVGNAADNVIKGGAGNDVIYGGGGQDQLWGGSGNDIFVF 385
>gi|73533607|gb|AAZ76880.1| protease [Pseudomonas fluorescens]
Length = 477
Score = 226 bits (576), Expect = 8e-57, Method: Composition-based stats.
Identities = 99/428 (23%), Positives = 161/428 (37%), Gaps = 41/428 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 38 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 97
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 98 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 157
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 158 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 217
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 218 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDTTYGFNSNTG 277
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D GG+D LD + + I+L S+S +GG N++IA+
Sbjct: 278 RDFLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQK-INLTATSFSDVGGLVGNVSIAKG 336
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ G SGND++IGN N +GND+ G G D + + ++
Sbjct: 337 VTIENAFGGSGNDLIIGNQVANTIKGGAGNDLIYGGGGADQL--WGGTGSDTFVYGASSD 394
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF S +++ + V + A L G ++
Sbjct: 395 SRPGAADKIFDFTSGSDKIDLSGIT-KGAGVTFVNAFTGHAGDAVLTYASGTNLGTLAVD 453
Query: 386 FYEFGLSE 393
F G+++
Sbjct: 454 FSGHGVAD 461
>gi|330937697|gb|EGH41595.1| serralysin [Pseudomonas syringae pv. pisi str. 1704B]
Length = 785
Score = 226 bits (575), Expect = 1e-56, Method: Composition-based stats.
Identities = 120/391 (30%), Positives = 187/391 (47%), Gaps = 36/391 (9%)
Query: 9 TTERIADHLLRDQYWS-NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
T ++ A++L + ++ DV L+ ++ L+ +AQ VAR+AL W+ V
Sbjct: 36 TLDQQANYLTDGYWHDAYGGSQHHFDVHAGGSLTVNLASLSASAQVVARYALQTWTNVSG 95
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
L F ET+ + I F +G Y + + + A W + G +HE
Sbjct: 96 LNFVETTAAAAINFSEQKSGAYSNSNYAGSIISDSSVNIASDW---VKYGLYYQQTYIHE 152
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCATPMVS 186
IGHALGL H G+YN G + + Y+ DS+ SVMSYF +++ +ASFGY ATPM++
Sbjct: 153 IGHALGLGHAGNYN-GSATFPNNAFYQEDSWKYSVMSYFSQDENTYSNASFGYVATPMLA 211
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDS------PFIQTIYDSGGDDLLDLTLIGGVK 240
DIVA+Q +YG G+N Y ++ + TIYDSGG+D ++++ G +
Sbjct: 212 DIVAIQSLYGTAVTRTGDNTYSFNKTSINTGTDFVPSLVATIYDSGGNDTINVSTYAGAQ 271
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN----------------- 283
+DL +E++SS+ G N+ IA+ TVIE+ + +G D +IGN
Sbjct: 272 -TVDLRSEAFSSLYGGLSNIAIARGTVIENAITGAGADTLIGNASDNFLNANAGNDQLQG 330
Query: 284 -SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-----KIYRFENAIIVYDANEHKQDF 337
N+ +G+DV +G +G+DT Y Y + V+DA D
Sbjct: 331 GDGNDRLMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTALVRNATLSVHDAQTSDVDT 390
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASY 368
LS VERL F+D+ + Y A
Sbjct: 391 LSSVERLSFSDRNASLDELLMAFPSRYGAFN 421
>gi|227326952|ref|ZP_03830976.1| metalloprotease [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 476
Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats.
Identities = 100/413 (24%), Positives = 166/413 (40%), Gaps = 39/413 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N KP +T++ A ++RD + + + Y S D + + +
Sbjct: 40 NGKPSFTSDLAAKEIVRDGLTWNGTNVFGKSANLTYSFLQNVRSIPSGDQGFVKFSAAQE 99
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
+ A+ +L WS V ++TF + S N Y P S
Sbjct: 100 QQAKLSLQSWSDVANITFTQVSPTQKATITFGNYTRDSSGRMDYDTQAYAYMPGNHSA-A 158
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
F+ HEIGHALGL HPGSYN G D Y D+
Sbjct: 159 GSAWFNYNSDTVRNPAT-EYGKQTLTHEIGHALGLNHPGSYNAGEGNPTYRDVTYAEDTR 217
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+MSY+ Q++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 218 QFSLMSYWSEQNTGGDFQGHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNTGRDF 277
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG+D D + I+LN +S +GG + N++IA I
Sbjct: 278 YTTTSNSQKLIFSVWDAGGNDTFDFSGY-RNDQRINLNEGGFSDVGGLKGNVSIAHGVTI 336
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND++IGN ANN+ +G+DV G G DT A ++ +Y +
Sbjct: 337 ENAIGGSGNDIIIGNDANNILNGGAGDDVIYGGGGADTLTGGAGKDIF-VYASASDSSYK 395
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + DF ++++ + +++ + + L + +
Sbjct: 396 NGYDTIMDFQRGIDKIDLS-ALNQKGDLQFVNSFTGLGNEALLNWNADSNTTD 447
>gi|251826356|gb|ACT21086.1| extracellular metalloprotease [Pseudomonas fluorescens]
Length = 477
Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats.
Identities = 98/428 (22%), Positives = 161/428 (37%), Gaps = 41/428 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 38 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 97
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 98 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 157
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 158 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 217
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 218 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDTTYGFNSNTG 277
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D GG+D LD + + I+L S+S +GG N++IA+
Sbjct: 278 RDFLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQK-INLTATSFSDVGGLVGNVSIAKG 336
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ G +GND++IGN N +GND+ G G D + + ++
Sbjct: 337 VTIENAFGGAGNDLIIGNQVANTIKGGAGNDLIYGGGGADQL--WGGAGSDTFVYGASSD 394
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF S +++ + V + A L G ++
Sbjct: 395 SKPGAADKIFDFTSGSDKIDLSGIT-KGAGVTFVNAFTGHAGDAVLSYASGTNLGTLAVD 453
Query: 386 FYEFGLSE 393
F G+++
Sbjct: 454 FSGHGVAD 461
>gi|77463798|ref|YP_353302.1| neutral zinc metallopeptidase [Rhodobacter sphaeroides 2.4.1]
gi|77388216|gb|ABA79401.1| Neutral zinc metallopeptidase [Rhodobacter sphaeroides 2.4.1]
Length = 531
Score = 225 bits (573), Expect = 2e-56, Method: Composition-based stats.
Identities = 120/392 (30%), Positives = 167/392 (42%), Gaps = 23/392 (5%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
V + IAD L+ + S + DV L+ +++ L + Q +AR AL W+ V
Sbjct: 45 VASMREIADQLVSGYWRSEGHSIRRFDVEPGDTLNVNLSGLTADGQRLARAALDTWADVT 104
Query: 67 DLTFEETSIHS---DIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILS 121
L F I NG T ++ N + W YG +
Sbjct: 105 GLKFNTAPRFGATVHIVIDDRENGAHSTATLSGGRLIKANVNVGRDWLADYGTDLNSYSL 164
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYC 180
+HEIGHALGL H G+YN G Y D + NDS+ SVMSYF ++S +DA +
Sbjct: 165 QTFIHEIGHALGLGHAGNYN-GSADYASDALFLNDSWQASVMSYFSQTENSYIDADKAFV 223
Query: 181 ATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDS----------PFIQTIYDSGGDD 229
TPM++DI+A+Q +YG P G N +Y P TI+D GG D
Sbjct: 224 VTPMIADILAIQTLYGTPGGLRADNTVYGTGSTAGGMYDRAATMTADPVAWTIFDQGGWD 283
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LDL IDL + S I G + N++IA TVIE+ G SGND +IGN NV
Sbjct: 284 RLDLRG-AEAPQLIDLRPGAISDIYGAKGNLSIAPGTVIEAARGGSGNDRLIGNGVANVL 342
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G+D+ G +G D Y L +I I + ++VE L A
Sbjct: 343 NGGGGSDIMRGGAGNDI---YHSDGLDRIVELPGQGIDRVISTASCTLAANVENLTLAGG 399
Query: 350 -CIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
I +++ A+ L G D F
Sbjct: 400 RSISGTGNGLANVIAGNAAANRLTGGAGADSF 431
Score = 37.1 bits (84), Expect = 8.9, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 28/94 (29%), Gaps = 6/94 (6%)
Query: 555 SNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKS 614
G S F L + D + + +D + I RAL + +
Sbjct: 421 RLTGGAGADSFVFATALGRGNVDRITDFSVADDTIRLDDAIF------RALPRGSLADAA 474
Query: 615 VMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
+E A + ++ L+ D G G
Sbjct: 475 FAANAEGRALDALDRILYETDTGALWYDRDGTGA 508
>gi|253687942|ref|YP_003017132.1| Serralysin [Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251754520|gb|ACT12596.1| Serralysin [Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 476
Score = 225 bits (573), Expect = 2e-56, Method: Composition-based stats.
Identities = 101/413 (24%), Positives = 165/413 (39%), Gaps = 39/413 (9%)
Query: 3 NIKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFD--ITELNPNAQ 52
N KP +T++ A ++RD + + + Y S D + + +
Sbjct: 40 NGKPSFTSDLAAKEIVRDGLTWNGTNVFGKSANLTYSFLQNVRSIPSGDQGFVKFSAAQE 99
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSRYF 99
+ A+ +L WS V ++TF + S N Y P S
Sbjct: 100 QQAKLSLQSWSDVANVTFTQVSPTQKATITFGNYTRDSSGRLDYDTQAYAYMPGNHSA-A 158
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
F+ HEIGHALGL HPGSYN G D Y D+
Sbjct: 159 GSAWFNYNSDTVRNPAT-EYGKQTLTHEIGHALGLNHPGSYNAGEGNPTYRDVTYAEDTR 217
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
S+MSY+ Q++ D Y A P++ DI A+Q +YGA G+ +Y
Sbjct: 218 QFSLMSYWSEQNTGGDFQGHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNTGRDF 277
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +++D+GG D D + I+LN +S +GG + N++IA I
Sbjct: 278 YSANSSSDKLIFSVWDAGGTDTFDFSGY-RNDQRINLNEGGFSDVGGLKGNVSIAHGVTI 336
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+ +G SGND++IGN ANN+ +G+DV G G DT A ++ +Y +
Sbjct: 337 ENAIGGSGNDIIIGNDANNILNGGAGDDVIYGGGGADTLTGGAGKDIF-VYASASDSSYK 395
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + DF ++++ + + +++ + L G +
Sbjct: 396 NGYDTITDFQRGIDKIDLS-ALNQNKDLQFVDAFTGRGNEALLDWDAGSNTTN 447
>gi|4115623|dbj|BAA36461.1| alkaline protease [Pseudomonas fluorescens]
Length = 482
Score = 225 bits (573), Expect = 2e-56, Method: Composition-based stats.
Identities = 102/433 (23%), Positives = 169/433 (39%), Gaps = 46/433 (10%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP +T ++ ADHLLR+ + F+ + ++ N
Sbjct: 38 NGKPSFTVDQAADHLLRENAAYRDVDGNGKIDLTYTFLTSASNATMNKHGITGFSQFNTQ 97
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYD-----SR 97
+ A A+ W+ V ++TF E + D N + P + S
Sbjct: 98 QKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNAKYNESG 157
Query: 98 YFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYE 154
+ + + HEIGH LGL HPG YN G D DY
Sbjct: 158 LDGTSWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDADYG 217
Query: 155 NDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 218 QDTRGYSVMSYWSESNTNQNFSKGGVEAYSSGPLIDDIAAIQKLYGANYNTRAGDTTYGF 277
Query: 210 EVQQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ +++D GG+D LD + + I+LN S+S +GG N+
Sbjct: 278 NSNTGRDFLSATSSADKLVFSVWDGGGNDTLDFSGFTQNQK-INLNETSFSDVGGLVGNV 336
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+IA+ +E+ G SGND++IGN+A N+ +GND+ G G D + +
Sbjct: 337 SIAKGVTVENAFGGSGNDLLIGNAAANILKGGAGNDIIYGGGGADQL--WGGAGSDTFVF 394
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ A + DF S +++ + + A L G ++
Sbjct: 395 GSSSDSKPGAADKIFDFTSGSDKIDLTGIT-KGAGLTFVNAFTGHAGDAVLSYASGTNLG 453
Query: 381 ESMKHFYEFGLSE 393
F G+++
Sbjct: 454 TLAVDFSGHGVAD 466
>gi|289677888|ref|ZP_06498778.1| serralysin [Pseudomonas syringae pv. syringae FF5]
Length = 691
Score = 225 bits (573), Expect = 2e-56, Method: Composition-based stats.
Identities = 120/391 (30%), Positives = 186/391 (47%), Gaps = 36/391 (9%)
Query: 9 TTERIADHLLRDQYWS-NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
T ++ A++L + ++ DV L+ ++ L+ +AQ VAR+AL W+ V
Sbjct: 36 TLDQQANYLTNGYWHDAYGGSQHHFDVHAGGSLTVNLASLSASAQVVARYALQTWTNVSG 95
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
L F ET+ + I F +G Y + + + A W + G +HE
Sbjct: 96 LNFVETTAAAAINFSEQKSGAYSNSNYAGSIISDSSVNIASDW---VKYGLYYQQTYIHE 152
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCATPMVS 186
IGHALGL H G+YN G + + Y+ DS+ SVMSYF +++ +ASFGY ATPM++
Sbjct: 153 IGHALGLGHAGNYN-GSATFPNNAFYQEDSWKYSVMSYFSQDENTYSNASFGYVATPMLA 211
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ------TIYDSGGDDLLDLTLIGGVK 240
DIVA+Q +YG G+N Y ++ TIYDSGG+D ++++ G +
Sbjct: 212 DIVAIQSLYGTAVTRTGDNTYSFNKTSINTGTDFVPGLVATIYDSGGNDTINVSTYVGAQ 271
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN----------------- 283
+DL +E++SS+ G N+ IA+ TVIE+ + +G D +IGN
Sbjct: 272 -TVDLRSEAFSSLYGGLSNIAIARGTVIENAITGAGADTLIGNASDNFLNANAGNDQLQG 330
Query: 284 -SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-----KIYRFENAIIVYDANEHKQDF 337
N+ +G+DV +G +G+DT Y Y + V+DA D
Sbjct: 331 GDGNDRLMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTALVRNATLSVHDAQTSDVDT 390
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASY 368
LS VERL F+D+ + Y A
Sbjct: 391 LSSVERLSFSDRNASLDELLMAFHSRYGAFN 421
>gi|8895497|gb|AAF80994.1| metalloprotease [Pseudomonas fluorescens]
Length = 477
Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats.
Identities = 95/414 (22%), Positives = 162/414 (39%), Gaps = 41/414 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ ADHLLRD + F+ ++ N
Sbjct: 38 NGKPSFSVDQAADHLLRDGASYKDVNHNGKIDLTYTFLTSASSATLNKHGISGFSQFNAQ 97
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ WS V +++F E++ D N + P + Y
Sbjct: 98 QKAQAVLAMQSWSDVANVSFTESASGGDTHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 157
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG-VDNDYENDSFL 159
+ + + EIGH LGL HPG YN G D D+ D+
Sbjct: 158 WYLTNSSYTPNKTPDVNNYGRQTLTQEIGHTLGLAHPGDYNAGTGNPSCKDADHGQDTRG 217
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYG-APKGSLGNNIYKIEVQQ- 213
SVMSY+ ++ + + G Y + P++ DI A+QK+YG G+ Y
Sbjct: 218 YSVMSYWSESNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGGVYSTRAGDTTYGFNSNTG 277
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D GG+D LD + + I+ N S+S +GG N++IA+
Sbjct: 278 RDFYSATSNADKLVFSVWDGGGNDTLDFSGFTQNQK-INPNEASFSDVGGLVGNVSIAKG 336
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+E+ G SGND++IGN+A N+ +GND+ G G D + + ++
Sbjct: 337 VTVENAFGGSGNDLIIGNNAANLIKGGAGNDIIYGGGGADQL--WGGAGKDTFVYGASSD 394
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
A + DF S +++ + + + A L G ++
Sbjct: 395 SKPGAADKIFDFTSGSDKIDLSGIT-KGAGLSFVNAFTGHAGDAVLSYASGTNL 447
>gi|332558673|ref|ZP_08412995.1| neutral zinc metallopeptidase [Rhodobacter sphaeroides WS8N]
gi|332276385|gb|EGJ21700.1| neutral zinc metallopeptidase [Rhodobacter sphaeroides WS8N]
Length = 531
Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats.
Identities = 119/392 (30%), Positives = 167/392 (42%), Gaps = 23/392 (5%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
V + IAD L+ + S + DV L+ +++ L + Q +AR AL W+ V
Sbjct: 45 VASMREIADQLVSGYWRSEGHSIRRFDVEPGDTLNVNLSGLTADGQRLARAALDTWADVT 104
Query: 67 DLTFEETSIHS---DIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILS 121
L F I NG T ++ N + W YG +
Sbjct: 105 GLKFNTAPRFGATVHIVIDDRENGAHSTATLSGGRLIKANVNVGRDWLADYGTDLNSYSL 164
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYC 180
+HEIGHALGL H G+YN G Y D + NDS+ SVMSYF ++S +DA +
Sbjct: 165 QTFIHEIGHALGLGHAGNYN-GSADYASDALFLNDSWQASVMSYFSQTENSYIDADKAFV 223
Query: 181 ATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDS----------PFIQTIYDSGGDD 229
TPM++DI+A+Q +YG P G + +Y P TI+D GG D
Sbjct: 224 VTPMIADILAIQTLYGTPGGLRADSTVYGTGSTAGGMYDRAATMTADPVSWTIFDQGGWD 283
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LDL IDL + S I G + N++IA TVIE+ G SGND +IGN NV
Sbjct: 284 RLDLRG-AEAPQLIDLRPGAISDIYGAKGNLSIAPGTVIEAARGGSGNDRLIGNGVANVL 342
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G+D+ G +G D Y L +I I + ++VE L A
Sbjct: 343 NGGGGSDIMRGGAGNDI---YHSDGLDRIVELPGQGIDRVISTASCTLAANVENLTLAGG 399
Query: 350 -CIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
I +++ A+ L G D F
Sbjct: 400 RAISGTGNGLANVITGNAAANRLTGGAGADSF 431
>gi|330981485|gb|EGH79588.1| serralysin [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 785
Score = 224 bits (571), Expect = 3e-56, Method: Composition-based stats.
Identities = 120/391 (30%), Positives = 186/391 (47%), Gaps = 36/391 (9%)
Query: 9 TTERIADHLLRDQYWS-NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
T ++ A++L + ++ DV L+ ++ L+ +AQ VAR+AL W+ V
Sbjct: 36 TLDQQANYLTNGYWHDAYGGSQHHFDVHAGGSLTVNLASLSASAQVVARYALQTWTNVSG 95
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
L F ET+ + I F +G Y + + + A W + G +HE
Sbjct: 96 LNFVETTAAAAINFSEQKSGAYSNSNYAGSIISDSSVNIASDW---VKYGLYYQQTYIHE 152
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCATPMVS 186
IGHALGL H G+YN G + + Y+ DS+ SVMSYF +++ +ASFGY ATPM++
Sbjct: 153 IGHALGLGHAGNYN-GSATFPNNAFYQEDSWKYSVMSYFSQDENTYSNASFGYVATPMLA 211
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ------TIYDSGGDDLLDLTLIGGVK 240
DIVA+Q +YG G+N Y ++ TIYDSGG+D ++++ G +
Sbjct: 212 DIVAIQSLYGPAVTRTGDNTYSFNKTSINTGTDFVPGLVATIYDSGGNDTINVSTYVGAQ 271
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN----------------- 283
+DL +E++SS+ G N+ IA+ TVIE+ + +G D +IGN
Sbjct: 272 -TVDLRSEAFSSLYGGLSNIAIARGTVIENAITGAGADTLIGNASDNFLNANAGNDQLQG 330
Query: 284 -SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-----KIYRFENAIIVYDANEHKQDF 337
N+ +G+DV +G +G+DT Y Y + V+DA D
Sbjct: 331 GDGNDRLMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTALVRNATLSVHDAQTSDVDT 390
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASY 368
LS VERL F+D+ + Y A
Sbjct: 391 LSSVERLSFSDRNASLDELLMAFHSRYGAFN 421
>gi|126462634|ref|YP_001043748.1| serralysin [Rhodobacter sphaeroides ATCC 17029]
gi|126104298|gb|ABN76976.1| Serralysin [Rhodobacter sphaeroides ATCC 17029]
Length = 531
Score = 224 bits (570), Expect = 4e-56, Method: Composition-based stats.
Identities = 119/392 (30%), Positives = 167/392 (42%), Gaps = 23/392 (5%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
V + IAD L+ + S + DV L+ +++ L + Q +AR AL W+ V
Sbjct: 45 VASMREIADQLVSGYWRSEGHSIRRFDVEPGDTLNVNLSGLTADGQRLARAALDTWADVT 104
Query: 67 DLTFEETSIHS---DIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILS 121
L F I NG T ++ N + W YG +
Sbjct: 105 GLKFNTAPRFGATVHIVIDDRENGAHSTATLSGGRLIKANVNVGRDWLADYGTDLNSYSL 164
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYC 180
+HEIGHALGL H G+YN G Y D + NDS+ SVMSYF ++S +DA +
Sbjct: 165 QTFIHEIGHALGLGHAGNYN-GSADYASDALFLNDSWQASVMSYFSQTENSYIDADKAFV 223
Query: 181 ATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDS----------PFIQTIYDSGGDD 229
TPM++DI+A+Q +YG P G + +Y P TI+D GG D
Sbjct: 224 VTPMIADILAIQTLYGTPGGLRADSTVYGTGSTAGGMYDRAATLTAEPVAWTIFDQGGWD 283
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LDL IDL + S I G + N++IA TVIE+ G SGND +IGN NV
Sbjct: 284 RLDLRG-AEAPQLIDLRPGAISDIYGAKGNLSIAPGTVIEAARGGSGNDRLIGNGVANVL 342
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G+D+ G +G D Y L +I I + ++VE L A
Sbjct: 343 NGGGGSDIMRGGAGNDI---YHSDGLDRIVELPGQGIDRVISTASCTLAANVENLTLAGG 399
Query: 350 -CIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
I +++ A+ L G D F
Sbjct: 400 RAITGTGNGLANVITGNAAANRLTGGAGADSF 431
>gi|221639650|ref|YP_002525912.1| Serralysin [Rhodobacter sphaeroides KD131]
gi|221160431|gb|ACM01411.1| Serralysin [Rhodobacter sphaeroides KD131]
Length = 531
Score = 224 bits (570), Expect = 5e-56, Method: Composition-based stats.
Identities = 120/394 (30%), Positives = 167/394 (42%), Gaps = 23/394 (5%)
Query: 5 KPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSK 64
+ V + IAD L+ + S + DV L+ +++ L + Q +AR AL W+
Sbjct: 43 REVASMREIADQLVSGYWRSEGHSIRRFDVEPGDTLNVNLSGLTADGQRLARAALDTWAD 102
Query: 65 VVDLTFEETSIHS---DIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTI 119
V L F I NG T ++ N + W YG +
Sbjct: 103 VTGLKFNTAPRFGATVHIVIDDRENGAHSTATLSGGRLIKANVNVGRDWLADYGTDLNSY 162
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFG 178
+HEIGHALGL H G+YN G Y D + NDS+ SVMSYF ++S +DA
Sbjct: 163 SLQTFIHEIGHALGLGHAGNYN-GSADYASDALFLNDSWQASVMSYFSQTENSYIDADKA 221
Query: 179 YCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDS----------PFIQTIYDSGG 227
+ TPM++DI+A+Q +YG P G N +Y P TI D GG
Sbjct: 222 FVVTPMIADILAIQTLYGTPGGLRADNTVYGTGSTAGGMYDRAATMTADPVAWTILDQGG 281
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D LDL IDL + S I G + N++IA TVIE+ G SGND +IGN N
Sbjct: 282 WDRLDLRG-AEAPQLIDLRPGAISDIYGAKGNLSIASGTVIEAARGGSGNDRLIGNGVAN 340
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
V G+D+ G +G D Y L +I I + ++VE L A
Sbjct: 341 VLNGGGGSDIMRGGAGNDI---YHSDGLDRIVELPGQGIDRVISTASCILAANVENLTLA 397
Query: 348 DQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
I +++ A+ L G D F
Sbjct: 398 GGRAISGTGNGLANVITGNAAANRLTGGAGADSF 431
>gi|66047210|ref|YP_237051.1| serralysin [Pseudomonas syringae pv. syringae B728a]
gi|63257917|gb|AAY39013.1| Serralysin [Pseudomonas syringae pv. syringae B728a]
Length = 785
Score = 223 bits (568), Expect = 8e-56, Method: Composition-based stats.
Identities = 120/391 (30%), Positives = 185/391 (47%), Gaps = 36/391 (9%)
Query: 9 TTERIADHLLRDQYWS-NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
T ++ A +L + ++ DV L+ ++ L+ +AQ VAR+AL W+ V
Sbjct: 36 TLDQQAYYLTDGYWHDAYGGSQHHFDVHAGGSLTVNLASLSASAQVVARYALQTWTNVSG 95
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
L F ET+ + I F +G Y + + + A W + G +HE
Sbjct: 96 LNFVETTAAAAINFSEQKSGAYSNSNYAGSIISDSSVNIASDW---VKYGLYYQQTYIHE 152
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCATPMVS 186
IGHALGL H G+YN G + + Y+ DS+ SVMSYF +++ ASFGY ATPM++
Sbjct: 153 IGHALGLGHAGNYN-GSATFPNNAFYQEDSWKYSVMSYFSQDENTYSSASFGYVATPMLA 211
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ------TIYDSGGDDLLDLTLIGGVK 240
DIVA+Q +YG G+N Y ++ TIYDSGG+D ++++ G +
Sbjct: 212 DIVAIQSLYGTAVTRTGDNTYSFNKTSINTGTDFVPGLVATIYDSGGNDTINVSTYVGAQ 271
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN----------------- 283
+DL +E++SS+ G N+ IA+ TVIE+ + +G D +IGN
Sbjct: 272 -TVDLRSEAFSSLYGGLSNIAIARGTVIENAITGAGADTLIGNASDNFLNANAGNDQLQG 330
Query: 284 -SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-----KIYRFENAIIVYDANEHKQDF 337
N+ +G+DV +G +G+DT Y Y + V+DA D
Sbjct: 331 GDGNDRLMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTALVRNGTLSVHDAQTSDVDT 390
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASY 368
LS VERL F+D+ + + Y A
Sbjct: 391 LSSVERLSFSDRNANLDELLMAFHSRYGAFN 421
Score = 44.0 bits (102), Expect = 0.076, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 44/183 (24%), Gaps = 12/183 (6%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND-------VFD 299
S+ GY +A I+S+ G++ + N ++G D
Sbjct: 195 NTYSSASFGYVATPMLADIVAIQSLYGTAVTRTGDNTYSFNKTSINTGTDFVPGLVATIY 254
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVK 357
S G DT + A +E +
Sbjct: 255 DSGGNDTINVSTYVGAQTVDLRSEAFSSLYGGLSNIAIARGTVIENAITGAGADTLIGNA 314
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL---YLGSYDDLRNV 414
+ L A + L G D G D + Y +YD
Sbjct: 315 SDNFLNANAGNDQLQGGDGNDRLMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTALVR 374
Query: 415 FGS 417
G+
Sbjct: 375 NGT 377
>gi|295690966|ref|YP_003594659.1| serralysin [Caulobacter segnis ATCC 21756]
gi|295432869|gb|ADG12041.1| Serralysin [Caulobacter segnis ATCC 21756]
Length = 662
Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats.
Identities = 99/430 (23%), Positives = 157/430 (36%), Gaps = 49/430 (11%)
Query: 4 IKPVYTTERIADHLLRD--------QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVA 55
K T + A LLR Q + Y+ T + + +
Sbjct: 37 GKTSLTIPQAASQLLRGEPGWSFQLQQAATVSYAYRASASTMPNDTGGFSTFSAAQIAQT 96
Query: 56 RWALGEWSKVVDLTFEETSIHSDIKFISSN----------------NGYVCTPRY--DSR 97
AL WS V ++F + SN + P S
Sbjct: 97 EKALAAWSDVARISFVRVGEGTSGSAAYSNEAAILFGNYSSGEDGAAAFAFYPGNYATSN 156
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV---YGVDNDYE 154
++ + + +HE+GHA+GL HPG Y+ Y + Y
Sbjct: 157 RSGDVWINSTLSYNANPTGTNYGGMVLIHELGHAIGLAHPGDYDADANTTLTYAANAGYY 216
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ- 212
DS +VMSYF ++ S Y ++P++ DI A Q YGA G+ +Y
Sbjct: 217 EDSRQYTVMSYFSESNTGGSFSGAYASSPLLDDIAAAQLAYGANMSTRTGDTVYGFNSNA 276
Query: 213 --------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ I ++D+GG D LD + + IDL +SS+GG N++IA
Sbjct: 277 GRDWFSATSTSTRLIFAVWDAGGTDTLDFSGYRVAQ-TIDLRAGYFSSVGGLTGNVSIAI 335
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY--RFE 322
IE+ +G + D++ GNSA N GND DG G DT + Y I
Sbjct: 336 GATIENALGGTAADIINGNSAANRIVGGQGNDTLDGGQGADTAVFSGKVASYAITPLSTG 395
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT-------ASYEDLIQVI 375
+ +A D + ++E L FAD + V+ + + + A E L + +
Sbjct: 396 GWQVKDNAGTDGTDVVVNIESLVFADGAVSLVDSRVATAMGGLLRLKPLSAGAETLAKSL 455
Query: 376 GQDVFESMKH 385
D+ +
Sbjct: 456 AADMAAGGTY 465
>gi|146277440|ref|YP_001167599.1| peptidase M10, serralysin-like protein [Rhodobacter sphaeroides
ATCC 17025]
gi|145555681|gb|ABP70294.1| Peptidase M10, serralysin-like protein [Rhodobacter sphaeroides
ATCC 17025]
Length = 614
Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats.
Identities = 120/453 (26%), Positives = 180/453 (39%), Gaps = 26/453 (5%)
Query: 6 PVY-TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSK 64
P + + ++IA L+ + DV L+ D + L + + +A AL WS
Sbjct: 126 PSFGSVQQIATQLVSGYWQWKGAPARAYDVKPGDTLNVDFSGLTADGKRLATLALQSWSD 185
Query: 65 VVDLTFEETSI---HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG--TI 119
V + F I G + Y ++ + + W G +
Sbjct: 186 VTGIRFNTNPARLATVHITMDDVEPGASTSTTYMGSKILKSHVNIGTKWLSDYGTDVNSY 245
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFG 178
+HE+GHALGL HPG+YN G+ YG DN + NDS+ +VMSYF +++ + A
Sbjct: 246 SLQTYIHELGHALGLGHPGNYN-GWANYGTDNLFLNDSWQATVMSYFSQTENTTIKADRA 304
Query: 179 YCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDS----------PFIQTIYDSGG 227
+ TPM++DIVAVQ IYG P G GN Y TIYD GG
Sbjct: 305 FVVTPMIADIVAVQMIYGTPSGLRAGNTTYGDNSNAGGMYDRIASLPGREVAWTIYDQGG 364
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D+LDL + IDL S S++ G N++IAQ TVIE G GNDV+IGNSA+N
Sbjct: 365 RDILDLRSATAAQ-VIDLRPGSVSNVYGAVGNLSIAQGTVIEVARGGKGNDVIIGNSAHN 423
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
G+D G +G D + ++ I + + VE L
Sbjct: 424 DLSGGGGSDTLRGGAGNDIYRVDGG---DRVIELAGNGIDRVISSASFQLGAHVENLTLT 480
Query: 348 D-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ I+ +++ + L G D F G + R F+
Sbjct: 481 GNRAINGTGNDLANVIVGNGAANVLTGRGGADSFVFST--ALGGGNVDRITDFNVVDDTI 538
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
DD + A + + ++
Sbjct: 539 RLDDAIFRALAPGRLAGSAFSANAAGRAKDATD 571
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/291 (13%), Positives = 79/291 (27%), Gaps = 23/291 (7%)
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG-SYDDLRNVFGSDR 419
++ T S D + + GR++ + Y G DLR+ +
Sbjct: 319 MIYGTPSGLRAGNTTYGDNSNAGGMYDRIASLPGREVAWTIYDQGGRDILDLRSATAAQV 378
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+++ N + E + + + S G +
Sbjct: 379 IDLRPGSVSNVYGAVGNLSIAQGTVI----EVARGGKGNDVIIGNSAHNDLSGGGGSDTL 434
Query: 480 FVTFDSYLYLGSYDDL---RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ +Y D G DR ++ + E +A+ + DL
Sbjct: 435 RGGAGNDIYRVDGGDRVIELAGNGIDRVISSASFQLGAHVENLTLTGNRAING--TGNDL 492
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
+ + G S F+ L + D + + D + I
Sbjct: 493 A-----NVIVGNGAAN--VLTGRGGADSFVFSTALGGGNVDRITDFNVVDDTIRLDDAIF 545
Query: 597 HGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
+ GR ++G F + A + ++ L+ D G G
Sbjct: 546 RALAPGR---LAGSAFSANAA---GRAKDATDRIIYETDTGSLWYDADGTG 590
>gi|164665003|gb|ABY65933.1| AprX [Pseudomonas fluorescens]
Length = 482
Score = 221 bits (562), Expect = 4e-55, Method: Composition-based stats.
Identities = 100/433 (23%), Positives = 167/433 (38%), Gaps = 46/433 (10%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ ADHLLR+ + F+ ++ +
Sbjct: 38 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGISGFSQFSNL 97
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYD-----SR 97
+ A A+ W+ V ++TF E + D N + P + S
Sbjct: 98 QKGQAVLAMQSWADVANVTFTERASGGDFHMTFGNYSSGQDGAAAFAYLPGTNEKYHTSG 157
Query: 98 YFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYE 154
+ + + G HEIGH LGL HPG YN G D DY
Sbjct: 158 TDGTSWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYRDADYG 217
Query: 155 NDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 218 QDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGF 277
Query: 210 EVQQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ +++D GG+D LD + + I+LN S+S +GG N+
Sbjct: 278 NSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQK-INLNETSFSDVGGLVGNV 336
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+IAQ +E+ G SGND++IGN+ N +GND+ G G D + +
Sbjct: 337 SIAQGVTVENAFGGSGNDLLIGNAVANTLKGGAGNDLIYGGGGADKL--WGGAGSDTFVF 394
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ A + DF S +++ + + A L G ++
Sbjct: 395 GASSDSRPGAADQILDFTSGSDKIDLTGIT-KGSGLHFVNAFTGAAGDAVLTYASGTNLG 453
Query: 381 ESMKHFYEFGLSE 393
F G+++
Sbjct: 454 TLAVDFAGHGVAD 466
>gi|290473566|ref|YP_003466436.1| Secreted alkaline metalloproteinase [Xenorhabdus bovienii SS-2004]
gi|289172869|emb|CBJ79640.1| Secreted alkaline metalloproteinase [Xenorhabdus bovienii SS-2004]
Length = 476
Score = 220 bits (561), Expect = 5e-55, Method: Composition-based stats.
Identities = 92/391 (23%), Positives = 158/391 (40%), Gaps = 44/391 (11%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF 81
S +F+ P V + N +E A +L WS V ++ F E S S
Sbjct: 69 ELSYHFLESAPSV-MPRFGIAGFSSFNDEQKEAALLSLQSWSDVANVKFNEVSSLSKANI 127
Query: 82 ISS--------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + P+ + + + + IG HEIGH LG
Sbjct: 128 TFGFFDYSITDDYAFATLPKGQNTTYSWYSAESRTFIDNDIGVNGYGRQTFTHEIGHTLG 187
Query: 134 LMHPGSYNGGY---PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L HP Y+ P Y +Y DS +VMSYF + + D + + P+++DI A
Sbjct: 188 LDHPAEYDASDAVRPTYISVGEYFEDSRAYTVMSYFSEKYTGQDYKGAFSSAPLLNDISA 247
Query: 191 VQKIYGAPK-GSLGNNIYKIEVQQKD---------SPFIQTIYDSGGDDLLDLTLIGGVK 240
+Q++YGA G+ +Y S + +++D+ G+D D + +
Sbjct: 248 IQQLYGANTETRTGDTVYGFNSNTDRDFMTATNAKSKLVFSVWDADGNDTFDFSGFTQNQ 307
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD- 299
I+LN ++S +GG + N++IA+ IE+ +G SG+D+++GNSA+NV G+D+
Sbjct: 308 -RINLNEGAFSDVGGLKGNVSIARGVTIENAIGGSGDDILVGNSADNVLKGGDGDDIIYG 366
Query: 300 --------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC- 350
G +G DTF Y + + DF+S +++ +D
Sbjct: 367 GLGGDDLWGGAGKDTFVY-----------LNGKESLKGNPDWIHDFISGEDKIDLSDFNF 415
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
++K A L D+ +
Sbjct: 416 GGKGDIKFVDSFSGRAGEVLLTYDKVTDITD 446
>gi|302184989|ref|ZP_07261662.1| serralysin [Pseudomonas syringae pv. syringae 642]
Length = 476
Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats.
Identities = 99/382 (25%), Positives = 164/382 (42%), Gaps = 42/382 (10%)
Query: 3 NIKPVYTTERIADHLLRDQY------------WSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ AD+LLRD + F+ KP +F + N
Sbjct: 39 NGKPSYSVDQAADYLLRDDASWTDRDGNGTINLTYTFLTAKPAGFDNSLGTF--SAFNAQ 96
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A ++ W+ V ++F + + D N + P +SR +
Sbjct: 97 QKAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQS 156
Query: 103 NFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + G HEIGH LGL HPG YN G D Y D+
Sbjct: 157 WYLVDNSYKVNTTPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPSYKDATYAEDTRG 216
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + G Y + P++ DI AVQ++YGA G+ +Y
Sbjct: 217 YSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDIAAVQQLYGANMSTRAGDTVYGFNSTAG 276
Query: 213 -------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
S + +++D GG D LD + + I+LN S+S +GG N++IA+
Sbjct: 277 RDFYSATSASSKVVFSVWDGGGKDTLDFSGFTQNQK-INLNAASFSDVGGMVGNVSIAKG 335
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
V+E+ VG SGND++IGN+A N +GND+ G G+D+ + ++
Sbjct: 336 VVVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGVDSL--TGGAGADIFVFGASSD 393
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
+ +DF+S +++ +
Sbjct: 394 SNRAGQDTIRDFVSGQDKIDVS 415
>gi|331010762|gb|EGH90818.1| serralysin [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 476
Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats.
Identities = 99/382 (25%), Positives = 164/382 (42%), Gaps = 42/382 (10%)
Query: 3 NIKPVYTTERIADHLLRDQY------------WSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ AD++LRD + F+ KP +F + N
Sbjct: 39 NGKPSYSVDQAADYILRDNAAWTDRDGNGTINLTYTFLTAKPAGFDNSLGTF--SAFNAQ 96
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A ++ W+ V ++F + + D N + P +SR +
Sbjct: 97 QKAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQS 156
Query: 103 NFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + G HEIGH LGL HPG YN G D Y D+
Sbjct: 157 WYLVDNSYKVNTTPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPTYKDASYAEDTRG 216
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + G Y + P++ DI AVQ++YGA G+ +Y
Sbjct: 217 YSVMSYWSESNTDQNFVKGGVAAYSSAPLLDDIAAVQQLYGANMSTRAGDTVYGFNSTAG 276
Query: 213 -------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
S + +++D GG D LD + + I+LN S+S +GG N++IA+
Sbjct: 277 RDFYSATSASSKVVFSVWDGGGKDTLDFSGFTQNQK-INLNAASFSDVGGMVGNVSIAKG 335
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
V+E+ VG SGND++IGN+A N +GND+ G G D+ + ++
Sbjct: 336 VVVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSL--TGGAGADIFVFGASSD 393
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
A + +DF+S +++ +
Sbjct: 394 SNRAAQDTIRDFVSGQDKIDVS 415
>gi|330900592|gb|EGH32011.1| serralysin [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 476
Score = 218 bits (555), Expect = 3e-54, Method: Composition-based stats.
Identities = 98/382 (25%), Positives = 163/382 (42%), Gaps = 42/382 (10%)
Query: 3 NIKPVYTTERIADHLLRDQY------------WSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ AD++LRD + F+ KP +F + N
Sbjct: 39 NGKPSYSVDQAADYILRDDAAWTDRDGNGIINLTYTFLTAKPAGFDNSLGTF--SAFNAQ 96
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A ++ W+ V ++F + + D N + P +SR +
Sbjct: 97 QKAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQS 156
Query: 103 NFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + G HEIGH LGL HPG YN G D Y D+
Sbjct: 157 WYLVDNSYKVNTTPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPSYKDATYAEDTRG 216
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + G Y + P++ DI AVQ++YGA G+ +Y
Sbjct: 217 YSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYGFNSTAG 276
Query: 213 -------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
S + +++D GG D LD + + I+LN S+S +GG N++IA+
Sbjct: 277 RDFYSATSASSKVVFSVWDGGGKDTLDFSGFTQNQK-INLNAASFSDVGGMVGNVSIAKG 335
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
V+E+ VG SGND++IGN+A N +GND+ G G D+ + ++
Sbjct: 336 VVVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSL--TGGAGADIFVFGASSD 393
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
+ +DF+S +++ +
Sbjct: 394 SNRAGQDTIRDFVSGQDKIDVS 415
>gi|237801166|ref|ZP_04589627.1| serralysin [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331024023|gb|EGI04080.1| serralysin [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 476
Score = 218 bits (554), Expect = 3e-54, Method: Composition-based stats.
Identities = 102/382 (26%), Positives = 165/382 (43%), Gaps = 42/382 (10%)
Query: 3 NIKPVYTTERIADHLLRDQY------------WSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ AD+LLRD + F+ KP +F + N
Sbjct: 39 NGKPSYSVDQAADYLLRDDAAWADRDGNGTINLTYTFLTAKPAGFNNSLGTF--SAFNAQ 96
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A ++ W+ V ++F + + D N + P +SR +
Sbjct: 97 QKAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSDGNAGGAAFAYLPSGNSRTDGQS 156
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ D + G H HEIGH LGL HPG YN G D Y D+
Sbjct: 157 WYLVDNSYKLNTTPDNGNYGRHTLTHEIGHTLGLSHPGDYNAGEGNPAYKDASYAEDTLG 216
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + G Y + P + DI AVQ++YGA G+ +Y
Sbjct: 217 YSVMSYWSESNTDQNFVKGGAPAYSSGPQLDDIAAVQQLYGANMSTRAGDTVYGFNSTAG 276
Query: 213 -------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
S + +++D GG D LD + + I+LN S+S +GG N++IA+
Sbjct: 277 RDFYSATSAASKVVFSVWDGGGKDTLDFSGFTQNQK-INLNAASFSDVGGMVGNVSIAKG 335
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
V+E+ VG SGND++IGN+A N +GND+ G +G D+ + ++
Sbjct: 336 VVVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGAGADSL--TGGAGADVFVFGASSD 393
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
A + +DF+S +++ +
Sbjct: 394 SNRAAQDTIRDFVSGQDKIDVS 415
>gi|307131044|ref|YP_003883060.1| secreted protease C [Dickeya dadantii 3937]
gi|306528573|gb|ADM98503.1| Secreted protease C precursor [Dickeya dadantii 3937]
Length = 477
Score = 218 bits (554), Expect = 3e-54, Method: Composition-based stats.
Identities = 89/394 (22%), Positives = 149/394 (37%), Gaps = 42/394 (10%)
Query: 4 IKPVYTTERIADHLLRD-------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
KP YT E+ D + R + F++ D + N
Sbjct: 40 DKPSYTLEQARDQITRGNITWNGEKVFGKSAALTYSFLQSVADSDMPDNFK-GFVKFNAA 98
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSR 97
+ + AL W+ V ++TF E N + P +
Sbjct: 99 QIQQTKLALQSWADVANVTFSEAKDGERATIQFGNYTLTPDGNTDNNSQAFGFYPGNW-K 157
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYEND 156
+ F+ + HEIGH LGL HPG Y+ G D Y D
Sbjct: 158 WAGSAWFNYNQADNQRPDINEFGRNTLTHEIGHTLGLYHPGDYDASDGNPGYKDVTYAED 217
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKD 215
+ S+MSY+ + D + A P++ DI A+QK+YGA G+ +Y
Sbjct: 218 TRQFSIMSYWNEGYTGGDFHGYHAAAPLMDDIAAIQKLYGANMSTRTGDTVYGFHSNSGR 277
Query: 216 ---------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+P I +++D+GG+D D + + I L + ++S +GG + N++IA
Sbjct: 278 DFYTATDSKTPLIFSVWDAGGNDTFDFSGYSANQ-RISLISGTFSDVGGLKGNVSIAAGA 336
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V+E+ +G SG+DV++GN ++N +GNDV G G D +
Sbjct: 337 VMENAIGGSGHDVIVGNLSDNRIDGGAGNDVLYGDGGADIL--TGGAGKDIFVYAWEKDS 394
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ A + DF +R+ + + +
Sbjct: 395 LSSAPDTITDFQRGEDRIDLSAFNKNHDLRFVDN 428
>gi|15596446|ref|NP_249940.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa PAO1]
gi|254234376|ref|ZP_04927699.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa C3719]
gi|254239625|ref|ZP_04932947.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa 2192]
gi|416632|sp|Q03023|APRA_PSEAE RecName: Full=Alkaline metalloproteinase; Short=AP; Flags:
Precursor
gi|1311334|pdb|1KAP|P Chain P, Three-Dimensional Structure Of The Alkaline Protease Of
Pseudomonas Aeruginosa: A Two-Domain Protein With A
Calcium Binding Parallel Beta Roll Motif
gi|9947180|gb|AAG04638.1|AE004554_6 alkaline metalloproteinase precursor [Pseudomonas aeruginosa PAO1]
gi|45283|emb|CAA45858.1| alkaline protease [Pseudomonas aeruginosa PAO1]
gi|126166307|gb|EAZ51818.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa C3719]
gi|126193003|gb|EAZ57066.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa 2192]
Length = 479
Score = 218 bits (554), Expect = 3e-54, Method: Composition-based stats.
Identities = 98/395 (24%), Positives = 159/395 (40%), Gaps = 42/395 (10%)
Query: 3 NIKPVYTTERIADHLLRDQ------------YWSNYFIRYKPDVLTTH-RLSFDITELN- 48
N P YT ++ A+ +LR+Q S F+ D T + DI L
Sbjct: 34 NGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSLGK 93
Query: 49 -----PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDS 96
Q A+ +L WS V ++ F + N + P
Sbjct: 94 FSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPD 153
Query: 97 RYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ + + + G HEIGH LGL HPG YN G D Y
Sbjct: 154 ALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATY 213
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 214 AEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSN 273
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
S + +++D+GG+D LD + + I+LN ++ S +GG + N++IA
Sbjct: 274 TERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFSQNQK-INLNEKALSDVGGLKGNVSIA 332
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+E+ +G SG+D++IGN NV +GND+ G G D + + +
Sbjct: 333 AGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQL--WGGAGADTFVYGDI 390
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
A A + +DF+S +++ +
Sbjct: 391 AESSAAAPDTLRDFVSGQDKIDLSGLDAFVNGGLV 425
>gi|107100698|ref|ZP_01364616.1| hypothetical protein PaerPA_01001725 [Pseudomonas aeruginosa PACS2]
Length = 472
Score = 218 bits (554), Expect = 3e-54, Method: Composition-based stats.
Identities = 98/395 (24%), Positives = 159/395 (40%), Gaps = 42/395 (10%)
Query: 3 NIKPVYTTERIADHLLRDQ------------YWSNYFIRYKPDVLTTH-RLSFDITELN- 48
N P YT ++ A+ +LR+Q S F+ D T + DI L
Sbjct: 27 NGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSLGK 86
Query: 49 -----PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDS 96
Q A+ +L WS V ++ F + N + P
Sbjct: 87 FSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPD 146
Query: 97 RYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ + + + G HEIGH LGL HPG YN G D Y
Sbjct: 147 ALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATY 206
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 207 AEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSN 266
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
S + +++D+GG+D LD + + I+LN ++ S +GG + N++IA
Sbjct: 267 TERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFSQNQK-INLNEKALSDVGGLKGNVSIA 325
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+E+ +G SG+D++IGN NV +GND+ G G D + + +
Sbjct: 326 AGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQL--WGGAGADTFVYGDI 383
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
A A + +DF+S +++ +
Sbjct: 384 AESSAAAPDTLRDFVSGQDKIDLSGLDAFVNGGLV 418
>gi|34559722|gb|AAQ75527.1| organic solvent-tolerant protease [Pseudomonas aeruginosa]
Length = 479
Score = 217 bits (552), Expect = 5e-54, Method: Composition-based stats.
Identities = 98/395 (24%), Positives = 159/395 (40%), Gaps = 42/395 (10%)
Query: 3 NIKPVYTTERIADHLLRDQ------------YWSNYFIRYKPDVLTTH-RLSFDITELN- 48
N P YT ++ A+ +LR+Q S F+ D T + DI L
Sbjct: 34 NGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSLGK 93
Query: 49 -----PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDS 96
Q A+ +L WS V ++ F + N + P
Sbjct: 94 FSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPD 153
Query: 97 RYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ + + + G HEIGH LGL HPG YN G D Y
Sbjct: 154 ALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATY 213
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 214 AEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSN 273
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
S + +++D+GG+D LD + + I+LN ++ S +GG + N++IA
Sbjct: 274 TERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFSQNQK-INLNEKALSDVGGLKGNVSIA 332
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+E+ +G SG+D++IGN NV +GND+ G G D + + +
Sbjct: 333 AGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQL--WGGAGTDTFVYGDI 390
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
A A + +DF+S +++ +
Sbjct: 391 AESSAAAPDTLRDFVSGQDKIDLSGLDAFVNGGLV 425
>gi|218892777|ref|YP_002441646.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa
LESB58]
gi|62467844|gb|AAX84042.1| alkaline protease [Pseudomonas aeruginosa]
gi|218773005|emb|CAW28817.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa
LESB58]
Length = 479
Score = 217 bits (552), Expect = 5e-54, Method: Composition-based stats.
Identities = 97/395 (24%), Positives = 159/395 (40%), Gaps = 42/395 (10%)
Query: 3 NIKPVYTTERIADHLLRDQ------------YWSNYFIRYKPDVLTTH-RLSFDITELN- 48
N P YT ++ A+ +LR+Q S F+ D T + DI L
Sbjct: 34 NGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSLGK 93
Query: 49 -----PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDS 96
Q A+ +L W+ V ++ F + N + P
Sbjct: 94 FSAFSAQQQAQAKLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPD 153
Query: 97 RYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ + + + G HEIGH LGL HPG YN G D Y
Sbjct: 154 ALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATY 213
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 214 AEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSN 273
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
S + +++D+GG+D LD + + I+LN ++ S +GG + N++IA
Sbjct: 274 TERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFSQNQK-INLNEKALSDVGGLKGNVSIA 332
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+E+ +G SG+D++IGN NV +GND+ G G D + + +
Sbjct: 333 AGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQL--WGGAGADTFVYGDI 390
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
A A + +DF+S +++ +
Sbjct: 391 AESSAAAPDTLRDFVSGQDKIDLSGLDAFVNGGLV 425
>gi|330954598|gb|EGH54858.1| serralysin [Pseudomonas syringae Cit 7]
Length = 476
Score = 217 bits (552), Expect = 5e-54, Method: Composition-based stats.
Identities = 99/382 (25%), Positives = 163/382 (42%), Gaps = 42/382 (10%)
Query: 3 NIKPVYTTERIADHLLRDQY------------WSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ AD++LRD + F+ KP +F + N
Sbjct: 39 NGKPSYSVDQAADYILRDNAAWTDRDGNGTINLTYTFLTAKPAGFDNSLGTF--SAFNAQ 96
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A ++ W+ V ++F + + D N + P +SR +
Sbjct: 97 QKAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQS 156
Query: 103 NFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + G HEIGH LGL HPG YN G D Y D+
Sbjct: 157 WYLVDNSYKVNTTPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPSYKDATYAEDTRG 216
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + G Y + P++ DI AVQ++YGA G+ +Y
Sbjct: 217 YSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYGFNSTAG 276
Query: 213 -------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
S + +++D GG D LD + + I+LN S+S IGG N++IA+
Sbjct: 277 RDFYSATSASSKVVFSVWDGGGKDTLDFSGFTQNQK-INLNAASFSDIGGMVGNVSIAKG 335
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
V+E+ VG SGND++IGN+A N +GND+ G G D+ + ++
Sbjct: 336 VVVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSL--TGGAGADIFVFGASSD 393
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
+ +DF+S +++ +
Sbjct: 394 SNRAGQDTIRDFVSGQDKIDVS 415
>gi|289679140|ref|ZP_06500030.1| serralysin [Pseudomonas syringae pv. syringae FF5]
Length = 476
Score = 216 bits (551), Expect = 6e-54, Method: Composition-based stats.
Identities = 98/382 (25%), Positives = 163/382 (42%), Gaps = 42/382 (10%)
Query: 3 NIKPVYTTERIADHLLRDQY------------WSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ AD++LRD + F+ KP +F + N
Sbjct: 39 NGKPSYSVDQAADYILRDDAAWTDRDGNGTINLTYTFLTAKPAGFDNSLGTF--SAFNAQ 96
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A ++ W+ V ++F + + D N + P +SR +
Sbjct: 97 QKAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQS 156
Query: 103 NFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + G HEIGH LGL HPG YN G D Y D+
Sbjct: 157 WYLVDNSYKVNTTPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPSYKDATYAEDTRG 216
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + G Y + P++ DI AVQ++YGA G+ +Y
Sbjct: 217 YSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYGFNSTAG 276
Query: 213 -------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
S + +++D GG D LD + + I+LN S+S +GG N++IA+
Sbjct: 277 RDFYSATSASSKVVFSVWDGGGKDTLDFSGFTQNQK-INLNAASFSDVGGMVGNVSIAKG 335
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
V+E+ VG SGND++IGN+A N +GND+ G G D+ + ++
Sbjct: 336 VVVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSL--TGGAGADIFVFGASSD 393
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
+ +DF+S +++ +
Sbjct: 394 SNRAGQDTIRDFVSGQDKIDVS 415
>gi|116049201|ref|YP_791996.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa
UCBPP-PA14]
gi|313106233|ref|ZP_07792483.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa 39016]
gi|115584422|gb|ABJ10437.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa
UCBPP-PA14]
gi|310878985|gb|EFQ37579.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa 39016]
Length = 479
Score = 216 bits (551), Expect = 7e-54, Method: Composition-based stats.
Identities = 97/395 (24%), Positives = 159/395 (40%), Gaps = 42/395 (10%)
Query: 3 NIKPVYTTERIADHLLRDQ------------YWSNYFIRYKPDVLTTH-RLSFDITELN- 48
N P YT ++ A+ +LR+Q S F+ D T + DI L
Sbjct: 34 NGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSLGK 93
Query: 49 -----PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDS 96
Q A+ +L W+ V ++ F + N + P
Sbjct: 94 FSAFSAQQQAQAKLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPD 153
Query: 97 RYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ + + + G HEIGH LGL HPG YN G D Y
Sbjct: 154 ALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATY 213
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 214 AEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSN 273
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
S + +++D+GG+D LD + + I+LN ++ S +GG + N++IA
Sbjct: 274 TERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFSQNQK-INLNEKALSDVGGLKGNVSIA 332
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+E+ +G SG+D++IGN NV +GND+ G G D + + +
Sbjct: 333 AGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQL--WGGAGADTFVYGDI 390
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
A A + +DF+S +++ +
Sbjct: 391 AESSAAAPDTLRDFVSGQDKIDLSGLDAFVNGGLV 425
>gi|296390372|ref|ZP_06879847.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa PAb1]
Length = 472
Score = 216 bits (551), Expect = 7e-54, Method: Composition-based stats.
Identities = 97/395 (24%), Positives = 159/395 (40%), Gaps = 42/395 (10%)
Query: 3 NIKPVYTTERIADHLLRDQ------------YWSNYFIRYKPDVLTTH-RLSFDITELN- 48
N P YT ++ A+ +LR+Q S F+ D T + DI L
Sbjct: 27 NGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSLGK 86
Query: 49 -----PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDS 96
Q A+ +L W+ V ++ F + N + P
Sbjct: 87 FSAFSAQQQAQAKLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPD 146
Query: 97 RYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ + + + G HEIGH LGL HPG YN G D Y
Sbjct: 147 ALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATY 206
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 207 AEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSN 266
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
S + +++D+GG+D LD + + I+LN ++ S +GG + N++IA
Sbjct: 267 TERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFSQNQK-INLNEKALSDVGGLKGNVSIA 325
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+E+ +G SG+D++IGN NV +GND+ G G D + + +
Sbjct: 326 AGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQL--WGGAGADTFVYGDI 383
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
A A + +DF+S +++ +
Sbjct: 384 AESSAAAPDTLRDFVSGQDKIDLSGLDAFVNGGLV 418
>gi|330958198|gb|EGH58458.1| alkaline metalloendoprotease [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 476
Score = 216 bits (551), Expect = 8e-54, Method: Composition-based stats.
Identities = 97/382 (25%), Positives = 164/382 (42%), Gaps = 42/382 (10%)
Query: 3 NIKPVYTTERIADHLLRDQY------------WSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ A+++LRD + F+ KP +F + N
Sbjct: 39 NGKPSYSVDQAANYILRDDASWADRDGNGTINLTYTFLTAKPAGFDNSLGTF--SAFNAQ 96
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A ++ W+ V ++F + + D N + P +SR +
Sbjct: 97 QKAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYTDGSSGGAAFAYLPSGNSRTDGQS 156
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + G HEIGH LGL HPG YN G D Y D+
Sbjct: 157 WYLINSSYQQNVSPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPTYNDVSYAEDTRG 216
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + G Y + P++ DI AVQ++YGA + +Y
Sbjct: 217 YSVMSYWSESNTDQNFVKGGAASYSSAPLLDDIAAVQQLYGANMSTRATDTVYGFNSTAG 276
Query: 213 -------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
S + +++D GG D LD + + I+LN S+S +GG N++IA++
Sbjct: 277 RDFYSATSAASKVVFSVWDGGGKDTLDFSGFTQNQK-INLNAASFSDVGGMVGNVSIAKN 335
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
V+E+ +G SGND++IGNSA N +GND+ G G D+ + ++
Sbjct: 336 VVVENAIGGSGNDLLIGNSAANDLKGGAGNDIIYGGGGADSL--TGGAGADIFVFGASSD 393
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
A + +DF+S +++ +
Sbjct: 394 SNRAAQDTIRDFVSGQDKIDVS 415
>gi|66046392|ref|YP_236233.1| serralysin [Pseudomonas syringae pv. syringae B728a]
gi|63257099|gb|AAY38195.1| Serralysin [Pseudomonas syringae pv. syringae B728a]
gi|330972872|gb|EGH72938.1| serralysin [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 476
Score = 216 bits (550), Expect = 9e-54, Method: Composition-based stats.
Identities = 97/382 (25%), Positives = 163/382 (42%), Gaps = 42/382 (10%)
Query: 3 NIKPVYTTERIADHLLRDQY------------WSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ AD++LRD + F+ KP +F + N
Sbjct: 39 NGKPSYSVDQAADYILRDDASWTDRDGNGTINLTYTFLTAKPAGFDNSLGTF--SAFNAQ 96
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A ++ W+ V ++F + + D N + P +SR +
Sbjct: 97 QKAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQS 156
Query: 103 NFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + G HEIGH LGL HPG YN G D Y D+
Sbjct: 157 WYLVDNSYKVNTTPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPSYKDATYAEDTRG 216
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + G Y + P++ DI AVQ++YGA G+ +Y
Sbjct: 217 YSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYGFNSTAG 276
Query: 213 -------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
S + +++D GG D LD + + I+LN S+S +GG N++IA+
Sbjct: 277 RDFYSATSASSKVVFSVWDGGGKDTLDFSGFTQNQK-INLNAASFSDVGGMVGNVSIAKG 335
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
V+E+ +G SGND++IGN+A N +GND+ G G D+ + ++
Sbjct: 336 VVVENALGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSL--TGGAGADIFVFGASSD 393
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
+ +DF+S +++ +
Sbjct: 394 SNRAGQDTIRDFVSGQDKIDVS 415
>gi|157370627|ref|YP_001478616.1| serralysin [Serratia proteamaculans 568]
gi|157322391|gb|ABV41488.1| Serralysin [Serratia proteamaculans 568]
Length = 490
Score = 216 bits (550), Expect = 1e-53, Method: Composition-based stats.
Identities = 95/420 (22%), Positives = 159/420 (37%), Gaps = 58/420 (13%)
Query: 3 NIKPVYTTERIADHLLR-DQYWSN-------YFIRYKPDVLTTHRLSFDI---------- 44
N KP + E + R +Q W+ + Y ++ + +
Sbjct: 31 NNKPSFGVEEAGKQIARSEQTWNGIHVTGKGATVTYSFPDWDYNQSNLNFRFGSNNQDTG 90
Query: 45 -TELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-----GYVCTPRYDSRY 98
+ + A+ +L W+ V +LTF E + N Y P +
Sbjct: 91 LSAFTAEQKAQAKLSLQSWADVANLTFVEVAPDQKSNITFGNYEGSGQAYAIKPFSGAGN 150
Query: 99 F-------MEINFDKADVW---------RYGIGKGTILSHNALHEIGHALGLMHPGSYN- 141
+ F+ + G + HE+GH LGL HPG YN
Sbjct: 151 DYRGHNTDGQSWFNINYDYADPRDGVYANLHPELGNYGRLSITHELGHTLGLDHPGKYNA 210
Query: 142 -GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
P +Y D+ SVMSY+ + D + A P+V DI A+Q +YGA
Sbjct: 211 DENNPPNYSMANYAEDTRQFSVMSYWDESLTGGDNGGHFAAAPLVDDIAAIQYLYGANTT 270
Query: 201 -SLGNNIYKIEVQQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G+ +Y + + +++D+GG+D LD + + I+L S+
Sbjct: 271 TRTGDTVYGFNSNTGRDFYTLTDSNQKLVFSVWDAGGNDTLDFSGYTQNQ-RINLTEGSF 329
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S +GG + N++IA VIE+ +G SGNDV++GN A N+ +GNDV G G D F
Sbjct: 330 SDVGGLKGNVSIAVGAVIENAIGGSGNDVIVGNDAANIIHGGAGNDVIYGGGGQDQLF-- 387
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSILEYTAS 367
S + + + + DF + ++++ F + + A
Sbjct: 388 GGSGKDIFVFSAVSDSSFKSPDKILDFETGIDKIDLSFFNHGDNGAGFIHFVDAFSGQAG 447
>gi|170022379|ref|YP_001718884.1| serralysin [Yersinia pseudotuberculosis YPIII]
gi|169748913|gb|ACA66431.1| Serralysin [Yersinia pseudotuberculosis YPIII]
Length = 444
Score = 216 bits (549), Expect = 1e-53, Method: Composition-based stats.
Identities = 94/368 (25%), Positives = 151/368 (41%), Gaps = 40/368 (10%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF 81
+S D T + + ++ NP A+ A+ W+ V +++F E S S
Sbjct: 57 TYSFSRAYTLWDYDRTFQQNAYVSLFNPAQIHQAKIAMQSWADVANISFTEASADSSANI 116
Query: 82 ISSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ N GY P S F I + + + HEIGHALGL
Sbjct: 117 LFLNFQRPGNVAGYAYHPNPGS--FSPIWINYSFSDNQHPSRLNYGGGVLTHEIGHALGL 174
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H + + + SVMSY QDS + Y +TP + DI A+Q +
Sbjct: 175 GHSHAPH-------------GYTQQMSVMSYLSEQDSGANYGQHYLSTPQMYDIAAIQYL 221
Query: 195 YGAP-KGSLGNNIYKIEVQQKDSPFIQT---------IYDSGGDDLLDLTLIGGVKNYID 244
YGA G+ +Y F T ++D+GG+D D + + I+
Sbjct: 222 YGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFCVWDAGGNDTFDFSGYKQNQ-MIN 280
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
LN +S +GG + N++IA IE+ +G SG+D +IGN NN+ + G+D G+ G
Sbjct: 281 LNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGN 340
Query: 305 DTFFYYAPSYL-----YKIYRFENAIIVYDANE--HKQDFLSDVERLRFADQCIDSVNVK 357
+TF Y + I+ F++ D ++ D + V+RL F Q
Sbjct: 341 NTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPSTDRVIFVDRLSFNGQTEMGQQYN 400
Query: 358 QRSILEYT 365
+ + + Y
Sbjct: 401 EVADITYL 408
>gi|51598104|ref|YP_072295.1| metalloprotease [Yersinia pseudotuberculosis IP 32953]
gi|51591386|emb|CAH23052.1| metalloprotease [Yersinia pseudotuberculosis IP 32953]
Length = 445
Score = 216 bits (549), Expect = 1e-53, Method: Composition-based stats.
Identities = 94/368 (25%), Positives = 151/368 (41%), Gaps = 40/368 (10%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF 81
+S D T + + ++ NP A+ A+ W+ V +++F E S S
Sbjct: 58 TYSFSRAYTLWDYDRTFQQNAYVSLFNPAQIHQAKIAMQSWADVANISFTEASADSSANI 117
Query: 82 ISSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ N GY P S F I + + + HEIGHALGL
Sbjct: 118 LFLNFQRPGNVAGYAYHPNLGS--FSPIWINYSFSDNQHPSRLNYGGGVLTHEIGHALGL 175
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H + + + SVMSY QDS + Y +TP + DI A+Q +
Sbjct: 176 GHSHAPH-------------GYTQQMSVMSYLSEQDSGANYGQHYLSTPQMYDIAAIQYL 222
Query: 195 YGAP-KGSLGNNIYKIEVQQKDSPFIQT---------IYDSGGDDLLDLTLIGGVKNYID 244
YGA G+ +Y F T ++D+GG+D D + + I+
Sbjct: 223 YGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFCVWDAGGNDTFDFSGYKQNQ-MIN 281
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
LN +S +GG + N++IA IE+ +G SG+D +IGN NN+ + G+D G+ G
Sbjct: 282 LNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGN 341
Query: 305 DTFFYYAPSYL-----YKIYRFENAIIVYDANE--HKQDFLSDVERLRFADQCIDSVNVK 357
+TF Y + I+ F++ D ++ D + V+RL F Q
Sbjct: 342 NTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPSTDRVIFVDRLSFNGQTEMGQQYN 401
Query: 358 QRSILEYT 365
+ + + Y
Sbjct: 402 EVADITYL 409
>gi|15825671|pdb|1JIW|P Chain P, Crystal Structure Of The Apr-Aprin Complex
gi|157829926|pdb|1AKL|A Chain A, Alkaline Protease From Pseudomonas Aeruginosa Ifo3080
Length = 470
Score = 216 bits (549), Expect = 1e-53, Method: Composition-based stats.
Identities = 98/395 (24%), Positives = 159/395 (40%), Gaps = 42/395 (10%)
Query: 3 NIKPVYTTERIADHLLRDQ------------YWSNYFIRYKPDVLTTH-RLSFDITELN- 48
N P YT ++ A+ +LR+Q S F+ D T + DI L
Sbjct: 25 NGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSLGK 84
Query: 49 -----PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDS 96
Q A+ +L WS V ++ F + N + P
Sbjct: 85 FSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPD 144
Query: 97 RYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDY 153
+ + + + G HEIGH LGL HPG YN G D Y
Sbjct: 145 ALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATY 204
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 205 AEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSN 264
Query: 213 Q---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
S + +++D+GG+D LD + + I+LN ++ S +GG + N++IA
Sbjct: 265 TERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFSQNQK-INLNEKALSDVGGLKGNVSIA 323
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+E+ +G SG+D++IGN NV +GND+ G G D + + +
Sbjct: 324 AGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQL--WGGAGADTFVYGDI 381
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
A A + +DF+S +++ +
Sbjct: 382 AESSAAAPDTLRDFVSGQDKIDLSGLDAFVNGGLV 416
>gi|254559808|ref|YP_003066903.1| Alkaline phosphatase [Methylobacterium extorquens DM4]
gi|254267086|emb|CAX22902.1| putative Alkaline phosphatase; Hemolysin-type calcium-binding domain
[Methylobacterium extorquens DM4]
Length = 1058
Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats.
Identities = 109/564 (19%), Positives = 183/564 (32%), Gaps = 63/564 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
SD+ D G+G I +
Sbjct: 514 GSDVGDTLDGLAGNDIIDGRGGNDTLAGGAGNDAISGGLGNDRITGGAGNDTVF--FNAS 571
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
GS N + + +S+ Q +A+ + +
Sbjct: 572 VDGSDNVDLGAGSDVANISLSTPGQIRLSFTSAQVGNGNANDSNDMADQDGGLAVRLQAE 631
Query: 196 GAPKGSLGN----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLN 246
GA G + G DL G
Sbjct: 632 GANDALTGPVSRFDDEGTTFTAGSGATFDVRDLVAGTQRGDLFEVVSLGTSGNDTLTATQ 691
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ I T + +VG +GND++ G S ++ F +GNDV +G +GLD
Sbjct: 692 AARPYYFNAGMGDDIIVGGTAKDFLVGGAGNDMLAGGSGDDTFIGGAGNDVINGGAGLDR 751
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID--SVNVKQRSILEY 364
+ S + + + +E D +E+ F+D+ I+ + +
Sbjct: 752 VIFNFASSAASVGLSASGVTTITGSE-GTDAFRGIEQFTFSDRTINNADASPLVDDVFYL 810
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAA 422
++ + L ++ HF E+G EGRD F + YL + D+
Sbjct: 811 LSNKDVLASG-----KDADDHFAEYGAREGRDPNAYFSTKGYLAANSDVAQS----GANP 861
Query: 423 ARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
Y G KEGR+P F Y+A + D+ A + H+ +G EGR
Sbjct: 862 LTQYAQAGWKEGRDPSATFDNEFYLARNPDVKAAGLNP-------LAHYIEYGQSEGRTT 914
Query: 482 ------------TFDSYLYLGSYDDLR----NVFGSDRGAAARHYITHGVKEGRNPDA-F 524
FD+ YL + D+ G A +H+ +G KEGR+P+A F
Sbjct: 915 FAAVGRTADIKGGFDAEYYLLANGDVASVATAAGGDTFAFARQHFDNYGWKEGRDPNAIF 974
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNV 582
Y+A++ D+ A H+ +G++EGR F+ YL + D+
Sbjct: 975 DTKGYLAAYTDVAQA-------GVNPLGHYDTYGWKEGRDPATDFDTSAYLQANPDVAQA 1027
Query: 583 FGSDRSAAAQHYITHGMKEGRALG 606
QH++ G+ E RA+
Sbjct: 1028 ----GIEPMQHFLQFGLVENRAVL 1047
>gi|186897322|ref|YP_001874434.1| peptidase M10 serralysin [Yersinia pseudotuberculosis PB1/+]
gi|186700348|gb|ACC90977.1| Peptidase M10 serralysin [Yersinia pseudotuberculosis PB1/+]
Length = 444
Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats.
Identities = 94/368 (25%), Positives = 151/368 (41%), Gaps = 40/368 (10%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF 81
+S D T + + ++ NP A+ A+ W+ V +++F E S S
Sbjct: 57 TYSFSRAYTLWDYDRTFQQNAYVSLFNPAQIHQAKIAMQSWADVANISFTEASADSSANI 116
Query: 82 ISSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ N GY P S F I + + + HEIGHALGL
Sbjct: 117 LFLNFQRPGNVAGYAYHPNLGS--FSPIWINYSFSDNQHPSRLNYGGGVLTHEIGHALGL 174
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H + + + SVMSY QDS + Y +TP + DI A+Q +
Sbjct: 175 GHSHAPH-------------GYTQQMSVMSYLSEQDSGANYGQHYLSTPQMYDIAAIQYL 221
Query: 195 YGAP-KGSLGNNIYKIEVQQKDSPFIQT---------IYDSGGDDLLDLTLIGGVKNYID 244
YGA G+ +Y F T ++D+GG+D D + + I+
Sbjct: 222 YGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFCVWDAGGNDTFDFSGYKQNQ-MIN 280
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
LN +S +GG + N++IA IE+ +G SG+D +IGN NN+ + G+D G+ G
Sbjct: 281 LNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGN 340
Query: 305 DTFFYYAPSYL-----YKIYRFENAIIVYDANE--HKQDFLSDVERLRFADQCIDSVNVK 357
+TF Y + I+ F++ D ++ D + V+RL F Q
Sbjct: 341 NTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPSTDRVIFVDRLSFNGQTEMGQQYN 400
Query: 358 QRSILEYT 365
+ + + Y
Sbjct: 401 EVADITYL 408
>gi|153948040|ref|YP_001402983.1| metalloprotease [Yersinia pseudotuberculosis IP 31758]
gi|152959535|gb|ABS46996.1| metalloprotease [Yersinia pseudotuberculosis IP 31758]
Length = 442
Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats.
Identities = 94/368 (25%), Positives = 151/368 (41%), Gaps = 40/368 (10%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF 81
+S D T + + ++ NP A+ A+ W+ V +++F E S S
Sbjct: 55 TYSFSRAYTLWDYDRTFQQNAYVSLFNPAQIHQAKIAMQSWADVANISFTEASADSSANI 114
Query: 82 ISSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ N GY P S F I + + + HEIGHALGL
Sbjct: 115 LFLNFQRPGNVAGYAYHPNLGS--FSPIWINYSFSDNQHPSRLNYGGGVLTHEIGHALGL 172
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H + + + SVMSY QDS + Y +TP + DI A+Q +
Sbjct: 173 GHSHAPH-------------GYTQQMSVMSYLSEQDSGANYGQHYLSTPQMYDIAAIQYL 219
Query: 195 YGAP-KGSLGNNIYKIEVQQKDSPFIQT---------IYDSGGDDLLDLTLIGGVKNYID 244
YGA G+ +Y F T ++D+GG+D D + + I+
Sbjct: 220 YGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFCVWDAGGNDTFDFSGYKQNQ-MIN 278
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
LN +S +GG + N++IA IE+ +G SG+D +IGN NN+ + G+D G+ G
Sbjct: 279 LNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGN 338
Query: 305 DTFFYYAPSYL-----YKIYRFENAIIVYDANE--HKQDFLSDVERLRFADQCIDSVNVK 357
+TF Y + I+ F++ D ++ D + V+RL F Q
Sbjct: 339 NTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPSTDRVIFVDRLSFNGQTEMGQQYN 398
Query: 358 QRSILEYT 365
+ + + Y
Sbjct: 399 EVADITYL 406
>gi|302384379|ref|YP_003820202.1| serralysin [Brevundimonas subvibrioides ATCC 15264]
gi|302195007|gb|ADL02579.1| Serralysin [Brevundimonas subvibrioides ATCC 15264]
Length = 1576
Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats.
Identities = 111/508 (21%), Positives = 171/508 (33%), Gaps = 50/508 (9%)
Query: 4 IKPVYTTERIADHLLR-DQYW-----SNYFIRYKPDVLTTHRL---SFDITELNPNAQEV 54
KP T A L R W + + Y + + ++
Sbjct: 81 GKPSLTLTDAAGQLTRTGLSWAPSLGTATTVTYAFRSTAPTTMPTDTAGFSQFTTAQVSA 140
Query: 55 ARWALGEWSKVVDLTFEETSIHS----DIKFISSNN--------GYVCTPRYDSRYF--M 100
AL WS V ++TF + + N + P S
Sbjct: 141 TLLALQAWSDVANITFTRVDDGGGYSNNATMLFGNYSSGEEGAGAFAYQPGNRSTTSVTG 200
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---YPVYGVDNDYENDS 157
++ + + + H HE+GHA+GL HP +YN YG D Y DS
Sbjct: 201 DVWVNASLTSNSSLTLLAYGQHTLTHEVGHAIGLSHPAAYNASEGVSITYGNDATYYEDS 260
Query: 158 FLTSVMSYFMPQDSMMDASFG---YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ 213
+VMSYF ++ + G Y A P++ DI A Q++YGA G+ Y
Sbjct: 261 RQYTVMSYFSESNTGANFRRGNAQYSAVPLLDDIAAAQRLYGANMSTRTGDTTYGFNSTA 320
Query: 214 KDSPFIQT---------IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ F T I+D+GG D LD + + IDL ++S++GG N+ IA
Sbjct: 321 DRAWFSATSSSSSLIFAIWDAGGIDTLDFSGFNQSQ-VIDLRQGAFSNVGGLIGNVAIAA 379
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE+ +G SGND + GNSANN G+D DG G+DT + Y +
Sbjct: 380 GAAIENAIGGSGNDTIYGNSANNRIDGGGGSDTIDGGLGVDTVVFGGARSAYSVSWNGQV 439
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
V + + +VE L F D I + ++ + D
Sbjct: 440 GSVLTIGTGQTTTVRNVEFLAFTDMAIATSPTGGVTVY----------GDLTNDSVNGTN 489
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G D L + S + G + +
Sbjct: 490 FADTITSGGGNDTVNGLDGNDLLDGGLGDDVLSGGLGSDVLTGGRGNDQLDGGAGVDVAD 549
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSN 472
Y A+ + + A G D +
Sbjct: 550 YRAAGSGVSVSLATGLATGGAGNDTLAG 577
Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 65/481 (13%), Positives = 133/481 (27%), Gaps = 24/481 (4%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDIT-ELNPNAQEVARWALGEWSKVVDLTF 70
+LL + + + D + D+ E + L ++ ++
Sbjct: 995 NAGANLLVGGAGVDRMVGGQGDDFYEVTEAGDVVVEAAGEGTDTVYSYLETYTASANV-- 1052
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E + + S+N + + A + G ++ G
Sbjct: 1053 ERLELAGRARNGSTNADGGTVIGNALDNTLTVGGGSAVLIGGGGSDTAVIGGARA---GF 1109
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+ + G E F V+ Q + D +
Sbjct: 1110 TIATNSGITTVTGGGRTITLAGVERIQFSDQVVVLTTGQTLVGTGGGEVLNGADGYDSL- 1168
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G G Y + GDD +++ + + E +
Sbjct: 1169 --YGNGGNDVLFG---YGGIDVLVGGDGADIMVGGDGDDTYEVSEVADNIQ--EGAGEGF 1221
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSS-------GNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ Y T+A +T +VGS+ G++ ++GN +N+ +GND F G +G
Sbjct: 1222 DTVFAYASGYTLAANTESLRLVGSATTGYGNAGDNTLVGNGLDNLLVGGAGNDTFYGGTG 1281
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT Y + I + ++VE LR +++ +++
Sbjct: 1282 DDT--YEVTEAGDVVVEAAGEGIDTIFSYVTYTLGANVENLRLVGTAVNATGNALNNMIV 1339
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
LI G D+ + ++E D+ +++
Sbjct: 1340 GNDGNNVLIGGAGNDIMVGSLGNDAYEVTEAGDVVYEAAGEGTDTVYSYIDTYQMSLNVE 1399
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS-NFGCEEGRFVT 482
Y+ + G + + L + G D F G R
Sbjct: 1400 ALYLVGSGRVGLGSAGNDTIVGNGLNNILNGNAGNDILTGGAGVDQFWHLAGGGHDRITD 1459
Query: 483 F 483
F
Sbjct: 1460 F 1460
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 84/575 (14%), Positives = 145/575 (25%), Gaps = 36/575 (6%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA----------LGEWS 63
+ L ++ I D + L D E+ V A L ++
Sbjct: 907 GNDTLNGFGGNDTLIGGGGDDVLVGSLGDDAYEVTEAGDVVTEQAGEGSDTVYSYLDSYT 966
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
++ E ++ + N G + + D G G
Sbjct: 967 LAANV--ETLALVGSARAGIGNAGNNTLIGNAGAN-LLVGGAGVDRMVGGQGDDFYEVTE 1023
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A + A G Y+ Y + E + D T
Sbjct: 1024 AGDVVVEAAGEGTDTVYSYLET-YTASANVERLELAGRARNGSTNADGGTVIGNALDNTL 1082
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
V AV G ++ +S L + I +
Sbjct: 1083 TVGGGSAVLIGGGGSDTAVIGGARAGFTIATNSGITTVTGGGRTITLAGVERIQFSDQVV 1142
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L T ++ G + +S+ G+ GNDV+ G +V G D+ G G
Sbjct: 1143 VLTTGQ--TLVGTGGGEVLNGADGYDSLYGNGGNDVLFGYGGIDVLVGGDGADIMVGGDG 1200
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT+ + + E V A ++ E LR + L
Sbjct: 1201 DDTYEVSEVADNIQEGAGEGFDTV-FAYASGYTLAANTESLRLVGSATTGYGNAGDNTLV 1259
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-------TFDSYLYLGSYDDLRNVFG 416
L+ G D F + ++E D+ D+ +Y NV
Sbjct: 1260 GNGLDNLLVGGAGNDTFYGGTGDDTYEVTEAGDVVVEAAGEGIDTIFSYVTYTLGANVEN 1319
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
A + + + + + + D++
Sbjct: 1320 LRLVGTAVNATGNALNNMIVGNDGNNVLIGGAGNDIMVGSLGNDAYEVTEAGDVVYEAAG 1379
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
EG Y Y+ +Y NV Y+ + G + + L
Sbjct: 1380 EGTDT---VYSYIDTYQMSLNV--------EALYLVGSGRVGLGSAGNDTIVGNGLNNIL 1428
Query: 537 INAFADAPDLVQAGKDHFSN-FGYEEGRSITFNPD 570
+ AG D F + G R F P
Sbjct: 1429 NGNAGNDILTGGAGVDQFWHLAGGGHDRITDFFPS 1463
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 60/203 (29%), Gaps = 19/203 (9%)
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
S +D DG +G+DT +Y + S+ + + + V + N + D L++VE ++F D +
Sbjct: 817 GSASDRIDGGAGVDTVYYNSYSFPFTVTTSDGVTTVRNNNTGETDTLTNVEFIQFIDMTV 876
Query: 352 DSV---------------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + + L G D S G D
Sbjct: 877 QLGQVAPISGTAAGETLNGTQFGDTIYGLGGNDTLNGFGGNDTLIGGGGDDVLVGSLGDD 936
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDAFK-ALEYIASHEDLIN 454
G + GSD + Y E A A + LI
Sbjct: 937 AY--EVTEAGDVVTEQAGEGSDTVYSYLDSYTLAANVETLALVGSARAGIGNAGNNTLIG 994
Query: 455 AFADAPDLVQVGKDHFSNFGCEE 477
+ G D ++
Sbjct: 995 NAGANLLVGGAGVDRMVGGQGDD 1017
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 62/243 (25%), Gaps = 14/243 (5%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E +I N D +G + ++G
Sbjct: 384 ENAIGGSGNDTIYGNSANNRIDGGGGSDTIDGGLGVDTVVFGGARSAYSVS-WNGQVGSV 442
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
L + + + D + T ++ + + + T
Sbjct: 443 LTIGTGQTTTVRNVEFLAFTDMAIATSPTGGVTVYGDLTNDSVNGTNFADTITSGGGNDT 502
Query: 192 QKIYGAPKGSLGNNIYK------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
G + G D+ D G + + L
Sbjct: 503 VNGLDGNDLLDGGLGDDVLSGGLGSDVLTGGRGNDQLDGGAGVDVADYRAAGSGVS-VSL 561
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
T G N T+A IE ++GS+ D +IG+ +N + G D G G D
Sbjct: 562 ATG---LATGGAGNDTLAG---IEDLLGSAYADTLIGDGGDNALSGNGGVDTLYGGGGND 615
Query: 306 TFF 308
F+
Sbjct: 616 RFY 618
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 66/561 (11%), Positives = 128/561 (22%), Gaps = 84/561 (14%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+I S + + + G N L +
Sbjct: 807 AGNITATSVFGSASDRIDGGAGVDTVYYNSYSFPFTVTTSDGVTTVRNNNTGETDTLTNV 866
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G + ++ +D +
Sbjct: 867 EFIQFIDMTVQLGQVAPISGTAAGETLNGTQFGDTIYGLGGNDTLNGFGGNDTLIGGGGD 926
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-TESWSSIG 254
GSLG++ Y EV + + + L N L S +
Sbjct: 927 DVLVGSLGDDAY--EVTEAGDVVTEQAGEGSDTVYSYLDSYTLAANVETLALVGSARAGI 984
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFF---- 308
G N T+ + +VG +G D ++G ++ + + DV G DT +
Sbjct: 985 GNAGNNTLIGNAGANLLVGGAGVDRMVGGQGDDFYEVTEAGDVVVEAAGEGTDTVYSYLE 1044
Query: 309 -------------------------------------YYAPSYLYKIYRFENAIIVYDAN 331
+ +
Sbjct: 1045 TYTASANVERLELAGRARNGSTNADGGTVIGNALDNTLTVGGGSAVLIGGGGSDTAVIGG 1104
Query: 332 E------------------HKQDFLSDVERLRFADQCIDSV---------------NVKQ 358
+ L+ VER++F+DQ +
Sbjct: 1105 ARAGFTIATNSGITTVTGGGRTITLAGVERIQFSDQVVVLTTGQTLVGTGGGEVLNGADG 1164
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
L + L G DV +G D S + + F +
Sbjct: 1165 YDSLYGNGGNDVLFGYGGIDVLVGGDGADIMVGGDGDDTYEVSEVADNIQEGAGEGFDTV 1224
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
A+ + + + R + A L+ D + G D F ++
Sbjct: 1225 FAYASGYTLAANTESLRLVGSATTGYGNAGDNTLVGNGLDNLLVGGAGNDTFYGGTGDDT 1284
Query: 479 RFVTFDSYLYLGSYDDLRNVFGS----DRGAAARHYITHGVKEGRNPDA-FKALEYIASH 533
VT + + + + + S GA + G +A + +
Sbjct: 1285 YEVTEAGDVVVEAAGEGIDTIFSYVTYTLGANVENLRLVGTAVNATGNALNNMIVGNDGN 1344
Query: 534 EDLINAFADAPDLVQAGKDHF 554
LI + + G D +
Sbjct: 1345 NVLIGGAGNDIMVGSLGNDAY 1365
>gi|22127728|ref|NP_671151.1| metalloprotease [Yersinia pestis KIM 10]
gi|45443084|ref|NP_994623.1| metalloprotease [Yersinia pestis biovar Microtus str. 91001]
gi|150261071|ref|ZP_01917799.1| metalloprotease [Yersinia pestis CA88-4125]
gi|218930968|ref|YP_002348843.1| metalloprotease [Yersinia pestis CO92]
gi|229836449|ref|ZP_04456616.1| metalloprotease [Yersinia pestis Pestoides A]
gi|229839671|ref|ZP_04459830.1| metalloprotease [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229841754|ref|ZP_04461910.1| metalloprotease [Yersinia pestis biovar Orientalis str. India 195]
gi|229904292|ref|ZP_04519403.1| metalloprotease [Yersinia pestis Nepal516]
gi|21960850|gb|AAM87402.1|AE013989_9 putative secreted metalloprotease [Yersinia pestis KIM 10]
gi|45437951|gb|AAS63500.1| metalloprotease [Yersinia pestis biovar Microtus str. 91001]
gi|115349579|emb|CAL22553.1| metalloprotease [Yersinia pestis CO92]
gi|149290479|gb|EDM40556.1| metalloprotease [Yersinia pestis CA88-4125]
gi|229678410|gb|EEO74515.1| metalloprotease [Yersinia pestis Nepal516]
gi|229691093|gb|EEO83146.1| metalloprotease [Yersinia pestis biovar Orientalis str. India 195]
gi|229696037|gb|EEO86084.1| metalloprotease [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229706517|gb|EEO92524.1| metalloprotease [Yersinia pestis Pestoides A]
gi|320017299|gb|ADW00871.1| metalloprotease [Yersinia pestis biovar Medievalis str. Harbin 35]
Length = 445
Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats.
Identities = 94/368 (25%), Positives = 150/368 (40%), Gaps = 40/368 (10%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF 81
+S D T + + I+ NP A+ A+ W+ V +++F E S S
Sbjct: 58 TYSFSRAYTLWDYDRTFQQNAYISLFNPAQIHQAKIAMQSWADVANISFTEASADSSANI 117
Query: 82 ISSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ N GY P S F I + + + HEIGHALGL
Sbjct: 118 LFLNFQRPSNVAGYAYYPNPGS--FSPIWINYSFSDNQHPSRLNDGGGVLTHEIGHALGL 175
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H + + + SVMSY Q S + Y +TP + DI A+Q +
Sbjct: 176 GHSHAPH-------------GYTQQMSVMSYLSEQGSGANYGQHYLSTPQMYDIAAIQYL 222
Query: 195 YGAP-KGSLGNNIYKIEVQQKDSPFIQT---------IYDSGGDDLLDLTLIGGVKNYID 244
YGA G+ +Y F T ++D+GG+D D + + I+
Sbjct: 223 YGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFCVWDAGGNDTFDFSGYKQNQ-MIN 281
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
LN +S +GG + N++IA IE+ +G SG+D +IGN NN+ + G+D G+ G
Sbjct: 282 LNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGN 341
Query: 305 DTFFYYAPSYL-----YKIYRFENAIIVYDANE--HKQDFLSDVERLRFADQCIDSVNVK 357
+TF Y + I+ F++ D ++ D + V+RL F Q
Sbjct: 342 NTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPSTDRVIFVDRLSFNGQTEMGQQYN 401
Query: 358 QRSILEYT 365
+ + + Y
Sbjct: 402 EVADITYL 409
>gi|1616941|dbj|BAA13503.1| alkaline proteinase [Pseudomonas aeruginosa]
Length = 476
Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats.
Identities = 88/353 (24%), Positives = 142/353 (40%), Gaps = 39/353 (11%)
Query: 3 NIKPVYTTERIADHLLRDQ------------YWSNYFIRYKPDVLTTH-RLSFDITELN- 48
N P YT ++ A+ +LR+Q S F+ D T + DI L
Sbjct: 34 NGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSLGK 93
Query: 49 -----PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDS 96
Q A+ +L WS V ++ F + N + P
Sbjct: 94 FSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGHQGDLTFGNFSSSVGGAAFAFLPDVPD 153
Query: 97 RYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
+ + + + HEIGH LGL P G D Y
Sbjct: 154 ALKGQSWYLINSSYSANVNPANANYGRQTLTHEIGHTLGLSTPDYNAGEGDPTYADATYA 213
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ 213
D+ SVMSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 214 EDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSNT 273
Query: 214 ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
S + +++D+GG+D LD + + I+LN ++ S +GG + N++IA
Sbjct: 274 ERDFYSATSSSSKLVFSVWDAGGNDTLDFSRFSQNQK-INLNEKALSDVGGLKGNLSIAA 332
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+E+ +G SG+D++ GN NV +GND+ G G D + A + +
Sbjct: 333 GVTVENAIGGSGSDLLYGNDVANVLKGGAGNDILYGGLGADQLWGGAGADTFV 385
>gi|270261821|ref|ZP_06190093.1| serralysin [Serratia odorifera 4Rx13]
gi|270043697|gb|EFA16789.1| serralysin [Serratia odorifera 4Rx13]
Length = 490
Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats.
Identities = 94/397 (23%), Positives = 151/397 (38%), Gaps = 55/397 (13%)
Query: 3 NIKPVYTTERIADHLLR-DQYWSNYFIR-------YKPDVLTTHRLSFD----------- 43
N KP + + R +Q W+ I Y ++ + +
Sbjct: 31 NNKPSFDVGEAGQQIARSEQTWNGVHITGQGATVTYSFPDWDYNQTNLNSVFFRADDRET 90
Query: 44 -ITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-----GYVCTPRYDSR 97
++ Q A+ +L W+ V ++TF E + N Y P +
Sbjct: 91 GLSAFTAEQQAQAKLSLQSWADVANITFVEVAPGHKSDITFGNYEGAGQAYAIKPFTQAG 150
Query: 98 YF-------MEINFDKADVW---------RYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ ++ G HEIGH LGL HPG YN
Sbjct: 151 NDYSGQHVAGQSWYNVNYDVADTGDGVYANLHPDLGNYGRLTFTHEIGHTLGLDHPGDYN 210
Query: 142 GGYP-VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK- 199
G Y Y D+ SVMSY+ + D Y A P+V DI A+Q +YGA
Sbjct: 211 AGDGATYKSVPTYAEDTRQFSVMSYWNESYTGGDNGGHYAAAPLVDDIAAIQYLYGANTS 270
Query: 200 GSLGNNIYKIEVQQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G+++Y + +++D GG D LD + + I+L S+
Sbjct: 271 TRAGDSVYGFHSNTGRDFYTANDSSQKLVFSVWDGGGKDTLDFSGYSQDQ-RINLTAGSF 329
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S +GG + N++IA IE+ +G SGNDV++GN+A N+ +GNDV G G D
Sbjct: 330 SDVGGLKGNISIAAGVTIENAIGGSGNDVIVGNNAANIIKGGAGNDVIYGGGGQDQL--S 387
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
S + Y + + DF + ++++ +
Sbjct: 388 GGSGKDIFVFAAVSDSPYTSPDKILDFETGIDKIDLS 424
>gi|162419360|ref|YP_001608372.1| metalloprotease [Yersinia pestis Angola]
gi|165926981|ref|ZP_02222813.1| metalloprotease [Yersinia pestis biovar Orientalis str. F1991016]
gi|165936949|ref|ZP_02225515.1| metalloprotease [Yersinia pestis biovar Orientalis str. IP275]
gi|166009505|ref|ZP_02230403.1| metalloprotease [Yersinia pestis biovar Antiqua str. E1979001]
gi|167400502|ref|ZP_02306011.1| metalloprotease [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167420863|ref|ZP_02312616.1| metalloprotease [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167426616|ref|ZP_02318369.1| metalloprotease [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167468060|ref|ZP_02332764.1| metalloprotease [Yersinia pestis FV-1]
gi|294504302|ref|YP_003568364.1| metalloprotease [Yersinia pestis Z176003]
gi|162352175|gb|ABX86123.1| metalloprotease [Yersinia pestis Angola]
gi|165915191|gb|EDR33802.1| metalloprotease [Yersinia pestis biovar Orientalis str. IP275]
gi|165921087|gb|EDR38311.1| metalloprotease [Yersinia pestis biovar Orientalis str. F1991016]
gi|165991427|gb|EDR43728.1| metalloprotease [Yersinia pestis biovar Antiqua str. E1979001]
gi|166960992|gb|EDR57013.1| metalloprotease [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167049870|gb|EDR61278.1| metalloprotease [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167054391|gb|EDR64207.1| metalloprotease [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|262363677|gb|ACY60398.1| metalloprotease [Yersinia pestis D106004]
gi|294354761|gb|ADE65102.1| metalloprotease [Yersinia pestis Z176003]
Length = 444
Score = 214 bits (545), Expect = 4e-53, Method: Composition-based stats.
Identities = 94/368 (25%), Positives = 150/368 (40%), Gaps = 40/368 (10%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF 81
+S D T + + I+ NP A+ A+ W+ V +++F E S S
Sbjct: 57 TYSFSRAYTLWDYDRTFQQNAYISLFNPAQIHQAKIAMQSWADVANISFTEASADSSANI 116
Query: 82 ISSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ N GY P S F I + + + HEIGHALGL
Sbjct: 117 LFLNFQRPSNVAGYAYYPNPGS--FSPIWINYSFSDNQHPSRLNDGGGVLTHEIGHALGL 174
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H + + + SVMSY Q S + Y +TP + DI A+Q +
Sbjct: 175 GHSHAPH-------------GYTQQMSVMSYLSEQGSGANYGQHYLSTPQMYDIAAIQYL 221
Query: 195 YGAP-KGSLGNNIYKIEVQQKDSPFIQT---------IYDSGGDDLLDLTLIGGVKNYID 244
YGA G+ +Y F T ++D+GG+D D + + I+
Sbjct: 222 YGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFCVWDAGGNDTFDFSGYKQNQ-MIN 280
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
LN +S +GG + N++IA IE+ +G SG+D +IGN NN+ + G+D G+ G
Sbjct: 281 LNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGN 340
Query: 305 DTFFYYAPSYL-----YKIYRFENAIIVYDANE--HKQDFLSDVERLRFADQCIDSVNVK 357
+TF Y + I+ F++ D ++ D + V+RL F Q
Sbjct: 341 NTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPSTDRVIFVDRLSFNGQTEMGQQYN 400
Query: 358 QRSILEYT 365
+ + + Y
Sbjct: 401 EVADITYL 408
>gi|30014084|emb|CAD89200.1| metalloprotease [Pseudomonas fluorescens]
Length = 481
Score = 214 bits (544), Expect = 5e-53, Method: Composition-based stats.
Identities = 98/418 (23%), Positives = 164/418 (39%), Gaps = 41/418 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ A LLRD + F+ ++ +
Sbjct: 44 NGKPSFSVDQAATQLLRDGAAYQDKDGSGKIELTYTFLTSASSSTMNKHGITGFSQFSAQ 103
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
Q A+ A+ W+ V ++TF E + D N + P + Y
Sbjct: 104 QQAQAKLAMQSWADVANVTFTEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 163
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + HEIGH+LGL HPG YN G D Y D+
Sbjct: 164 WYLINSGYTQNKNPDLNNYGRQTLTHEIGHSLGLAHPGDYNAGNGNPTYNDASYGQDTRG 223
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGSLGNNI-YKIEVQQ- 213
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA + + Y
Sbjct: 224 YSVMSYWSESNTSQNFSKGGVEAYSSGPLMDDIAAIQKLYGANTTTRTGDTTYGFNSNTG 283
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D+GG D LD + + I+LN S+S +GG N++IA+
Sbjct: 284 RDFLSASSSSDKVVFSVWDAGGKDTLDFSGFTQNQK-INLNDASFSDVGGMVGNVSIAKG 342
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+IE+ +G SGND++IGNS N +GND+ G G D + + ++
Sbjct: 343 AIIENAIGGSGNDLLIGNSVANELKGGAGNDILWGGGGADKL--WGGAGSDTFVFAASSD 400
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
A + DF+S ++++ + + S +A L G +
Sbjct: 401 SKPGAIDQILDFVSGLDKIDLTGIT-NGAGLHFVSSFTGSAGDAILTSSGGNSLLSVD 457
>gi|296533583|ref|ZP_06896151.1| glycerophosphodiester phosphodiesterase [Roseomonas cervicalis ATCC
49957]
gi|296266091|gb|EFH12148.1| glycerophosphodiester phosphodiesterase [Roseomonas cervicalis ATCC
49957]
Length = 690
Score = 214 bits (544), Expect = 5e-53, Method: Composition-based stats.
Identities = 86/378 (22%), Positives = 140/378 (37%), Gaps = 52/378 (13%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
T + G N + + + G G+DV+ G +++ GND DG G D
Sbjct: 342 ATAENDMLTGGSGNDFLYGGEGDDIIEGGDGDDVLYGEQGDDMLIGGLGNDTLDGGEGRD 401
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI--DSVNVKQRSILE 363
T P Y + + L +E LRFAD + D++ ++
Sbjct: 402 TVVLSGPLASYSFDVVDGLLQAV--GPDGTTTLRAIELLRFADGTVALDAMAQGFDALSY 459
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGA 421
+ + + + H+ +FG EGRD F + YL + D+
Sbjct: 460 ALINADVWQAGV-----DLRAHYDQFGWREGRDPSGLFSTEAYLANNADVAAA----GIN 510
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+HY+ +G +EGR F +Y+A + D+ A D H+ G EGR
Sbjct: 511 PLQHYLQYGSQEGRLTSPWFDGRDYLARNADVAEAGVDPML-------HYLTNGFLEGRV 563
Query: 481 V-----------TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALE 528
FD+ Y + D+ A HY +G EGR+ +A F+
Sbjct: 564 ALFVIGRDIGADAFDATFYRLANADVARAGID----ARAHYEQYGRAEGRDANAYFEGET 619
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSD 586
Y+A + D+ A P H+ G+ EGRS F+ YL + + +
Sbjct: 620 YLALNADVAAA-GVDPL------AHYLADGWREGRSTPGEFDAQGYLAA----YADVAAA 668
Query: 587 RSAAAQHYITHGMKEGRA 604
H++ +G EGR
Sbjct: 669 EINPLLHFLQYGAAEGRV 686
Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats.
Identities = 76/348 (21%), Positives = 118/348 (33%), Gaps = 61/348 (17%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND++ G S N+ + G+D+ +G G D Y + +
Sbjct: 346 NDMLTGGSGNDFLYGGEGDDIIEGGDGDD--VLYGEQGDDMLIGGLGNDTLDGGEGRDTV 403
Query: 337 FLSD-VERLRFA--DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
LS + F D + +V + L E L G ++M
Sbjct: 404 VLSGPLASYSFDVVDGLLQAVGPDGTTTLRAI---ELLRFADGTVALDAMA--------- 451
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDL 452
FD+ Y D+ HY G +EGR+P F Y+A++ D+
Sbjct: 452 ---QGFDALSYALINADVWQA----GVDLRAHYDQFGWREGRDPSGLFSTEAYLANNADV 504
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHY 510
A + H+ +G +EGR + FD YL D+ HY
Sbjct: 505 AAAGINP-------LQHYLQYGSQEGRLTSPWFDGRDYLARNADVAEAG----VDPMLHY 553
Query: 511 ITHGVKEGR----------NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
+T+G EGR DAF A Y ++ D+ A + H+ +G
Sbjct: 554 LTNGFLEGRVALFVIGRDIGADAFDATFYRLANADVARA-------GIDARAHYEQYGRA 606
Query: 561 EGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
EGR F + YL D+ HY+ G +EGR+
Sbjct: 607 EGRDANAYFEGETYLALNADVAAA----GVDPLAHYLADGWREGRSTP 650
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 82/269 (30%), Gaps = 67/269 (24%)
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
TA + L G D + +G D+ Y DD+
Sbjct: 343 TAENDMLTGGSGNDFLYGGEGDDIIEGGDGDDVL-----YGEQGDDML----------IG 387
Query: 425 HYITHGVKEGRNPDAFKALEYIASHE-DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ G D +AS+ D+++ V
Sbjct: 388 GLGNDTLDGGEGRDTVVLSGPLASYSFDVVDGLLQ---------------------AVGP 426
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
D L + + LR G+ A F AL Y + D+ A
Sbjct: 427 DGTTTLRAIELLRFADGTVALDAMA-------------QGFDALSYALINADVWQA---- 469
Query: 544 PDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
+ H+ FG+ EGR + F+ + YL + D+ QHY+ +G +E
Sbjct: 470 ---GVDLRAHYDQFGWREGRDPSGLFSTEAYLANNADVAAA----GINPLQHYLQYGSQE 522
Query: 602 GRALGISGMQFKSVMNLSEKSRDKADLSL 630
GR ++ F + ++ D A+ +
Sbjct: 523 GR---LTSPWF-DGRDYLARNADVAEAGV 547
>gi|108809791|ref|YP_653707.1| metalloprotease [Yersinia pestis Antiqua]
gi|108813781|ref|YP_649548.1| metalloprotease [Yersinia pestis Nepal516]
gi|145600589|ref|YP_001164665.1| metalloprotease [Yersinia pestis Pestoides F]
gi|270488101|ref|ZP_06205175.1| hypothetical protein YPD27_1615 [Yersinia pestis KIM D27]
gi|108777429|gb|ABG19948.1| metalloprotease [Yersinia pestis Nepal516]
gi|108781704|gb|ABG15762.1| metalloprotease [Yersinia pestis Antiqua]
gi|145212285|gb|ABP41692.1| metalloprotease [Yersinia pestis Pestoides F]
gi|262367608|gb|ACY64165.1| metalloprotease [Yersinia pestis D182038]
gi|270336605|gb|EFA47382.1| hypothetical protein YPD27_1615 [Yersinia pestis KIM D27]
Length = 442
Score = 213 bits (543), Expect = 6e-53, Method: Composition-based stats.
Identities = 94/368 (25%), Positives = 150/368 (40%), Gaps = 40/368 (10%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF 81
+S D T + + I+ NP A+ A+ W+ V +++F E S S
Sbjct: 55 TYSFSRAYTLWDYDRTFQQNAYISLFNPAQIHQAKIAMQSWADVANISFTEASADSSANI 114
Query: 82 ISSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ N GY P S F I + + + HEIGHALGL
Sbjct: 115 LFLNFQRPSNVAGYAYYPNPGS--FSPIWINYSFSDNQHPSRLNDGGGVLTHEIGHALGL 172
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H + + + SVMSY Q S + Y +TP + DI A+Q +
Sbjct: 173 GHSHAPH-------------GYTQQMSVMSYLSEQGSGANYGQHYLSTPQMYDIAAIQYL 219
Query: 195 YGAP-KGSLGNNIYKIEVQQKDSPFIQT---------IYDSGGDDLLDLTLIGGVKNYID 244
YGA G+ +Y F T ++D+GG+D D + + I+
Sbjct: 220 YGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFCVWDAGGNDTFDFSGYKQNQ-MIN 278
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
LN +S +GG + N++IA IE+ +G SG+D +IGN NN+ + G+D G+ G
Sbjct: 279 LNELCFSDVGGLKGNVSIAADVTIENAIGGSGHDDIIGNHTNNILTGNGGSDQLWGNGGN 338
Query: 305 DTFFYYAPSYL-----YKIYRFENAIIVYDANE--HKQDFLSDVERLRFADQCIDSVNVK 357
+TF Y + I+ F++ D ++ D + V+RL F Q
Sbjct: 339 NTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPSTDRVIFVDRLSFNGQTEMGQQYN 398
Query: 358 QRSILEYT 365
+ + + Y
Sbjct: 399 EVADITYL 406
>gi|330875816|gb|EGH09965.1| alkaline metalloendoprotease [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 475
Score = 213 bits (543), Expect = 7e-53, Method: Composition-based stats.
Identities = 95/382 (24%), Positives = 159/382 (41%), Gaps = 43/382 (11%)
Query: 3 NIKPVYTTERIADHLLRDQY------------WSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ A+ +LRD + F+ KP +F + N
Sbjct: 39 NGKPSYSVDQAANFILRDHAAWSDRDGNGTINLTYTFLTAKPAGFDNSLGTF--SAFNAQ 96
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A ++ W+ V ++F + + D N + P +
Sbjct: 97 QKAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSDGSSGGAAFAYLPSGGR-TDGQS 155
Query: 103 NFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ D + G HEIGH LGL HPG YN G D Y D+
Sbjct: 156 WYLIDDSYRQNVSPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYKDATYAEDTRG 215
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + G Y + P++ DI AVQ++YGA + +Y
Sbjct: 216 YSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDIAAVQQLYGANLSTRATDTVYGFNSTAG 275
Query: 213 -------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
S + +++D GG D LD + + I+LN S+S +GG N++IA+
Sbjct: 276 RDFYSATSASSKVVFSVWDGGGKDTLDFSGFTQNQK-INLNAASFSDVGGMVGNVSIAKG 334
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
V+E+ +G SGND++IGN+A N +GND+ G G D+ + ++
Sbjct: 335 VVVENAIGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSL--TGGAGADIFVFGASSD 392
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
A + +DF+S +++ +
Sbjct: 393 SNRAAQDTIRDFVSGQDKIDVS 414
>gi|238791578|ref|ZP_04635216.1| Serralysin [Yersinia intermedia ATCC 29909]
gi|238729194|gb|EEQ20710.1| Serralysin [Yersinia intermedia ATCC 29909]
Length = 485
Score = 213 bits (542), Expect = 8e-53, Method: Composition-based stats.
Identities = 91/389 (23%), Positives = 146/389 (37%), Gaps = 33/389 (8%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDI 79
D + F+ + + NP +++L WS V ++ F E
Sbjct: 73 DVDLNYSFLDLQSQKSNDVH---GFIKFNPEQVTQTKFSLQSWSDVANIHFTEVGPTEKA 129
Query: 80 KFISSNN----------GYVCTPR------YDSRYFMEINFDKADVWRYGIGKGTILSHN 123
N G T ++ K
Sbjct: 130 NITLGNYSLTADGQLAGGQAYTSSSYTSGPNGRIADTSTWYNYNMDNIREPEKMEYGRLT 189
Query: 124 ALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GHALGL HP +YN G + D Y D+ S+MSY+ S D Y +T
Sbjct: 190 LAHELGHALGLSHPANYNAGQGNTFAKDAVYGEDTRQFSIMSYWDAWQSGADHQGHYAST 249
Query: 183 PMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQT---------IYDSGGDDLLD 232
P+V DI A+Q++YGA +NIY + F T ++D+GG D D
Sbjct: 250 PLVDDIFAIQRLYGANMDTRTEDNIYGFNSNTQRDSFTLTDSSDQKVFSVWDAGGIDTFD 309
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ + I+L ++S +GG + N++IA + IE+ +G SGNDV++GN A+N
Sbjct: 310 FSGYSVDQ-RINLEEAAFSDVGGLKANVSIAANVTIENAIGGSGNDVLVGNGADNELHGG 368
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+GNDV G G D + S A + DF ++++ +
Sbjct: 369 AGNDVLFGGGGADKL--WGGSGSDIFVFGRTTDSSPSAPDWIMDFEGGIDKIDLSVFNTG 426
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFE 381
S + +A L ++ +
Sbjct: 427 SGGIHFVDHFSGSAGEALLTYDPQTNISD 455
>gi|110598386|ref|ZP_01386659.1| VCBS [Chlorobium ferrooxidans DSM 13031]
gi|110339995|gb|EAT58497.1| VCBS [Chlorobium ferrooxidans DSM 13031]
Length = 1656
Score = 213 bits (541), Expect = 1e-52, Method: Composition-based stats.
Identities = 131/675 (19%), Positives = 212/675 (31%), Gaps = 128/675 (18%)
Query: 30 YKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV------------------VDLTFE 71
D T + +++ AR + + ++T
Sbjct: 1028 TNVDGYTPSEGGTSLVQMSALQVATARLSFQLLDDIMAKSSGADHRLVQIADPSANITLN 1087
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK--GTILSHNALHEIG 129
+S + S + S +I A IG G+ +HEIG
Sbjct: 1088 YSSNTGGGTYTISFGTVDTVTQSFSITAEQIWLSSAWSSNSDIGMSLGSYGLFTMIHEIG 1147
Query: 130 HALGLMHPGSYNGGYP---VYGVDNDYENDSFLTSVMSYFMPQDSMMD-------ASFGY 179
HALGL HPG Y+ G Y + + D+ +VMSYF +SF +
Sbjct: 1148 HALGLSHPGVYDAGNGGTITYQNNAAFAEDNRKYTVMSYFGGYLPGYGWYPDGTYSSFIF 1207
Query: 180 CATPMVSDIVAVQKIYGAPK-GSLGNNIYKIE-------------VQQKDSPFIQTIYDS 225
TPM+ DI A+Q ++GA G+ IY ++ I TI+D+
Sbjct: 1208 PQTPMLYDIAAIQALHGADTVTRTGDTIYGFNCNLASTDAERPIYDFTSNATPIFTIWDA 1267
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG D +D + + I+LN ++SS+GG +N+ IA IE VG SGNDV+IG++A
Sbjct: 1268 GGMDTIDCSGYTT-QQIINLNPGTYSSLGGMTENVAIAFDCTIERAVGGSGNDVLIGSAA 1326
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS------ 339
N + D + + D + + + V A+ + D L+
Sbjct: 1327 LNYLNGGNAGDFYIVNRAGDHL-----AAEFADTGTTGSDEVRFASTIEHDTLTLFAGDT 1381
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYE----DLIQVIGQDVFESMKHFYEFGLSEGR 395
+ER+ S + L+ AS + G + + +G
Sbjct: 1382 GIERVVIGTGVGISGVTTGTTSLDVDASAVLNPIVITGNAGANKLTGTTYNDVLYGGKGT 1441
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
D+ G+ D+ ++F +D
Sbjct: 1442 DLLNG-----GNGSDIYHIFSADEHL---------------------------------- 1462
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY-DDLRNVFGSDRGAAARHYITHG 514
G ++ RF + + L Y D + G A + G
Sbjct: 1463 --------SAEFSDTGTTGSDDVRFGSTIANDTLTLYAGDTGIERVTATGTATLNIDASG 1514
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLT 574
V G A D F G S F L
Sbjct: 1515 VLNGLLLTGN---------------AGSNTLTGTAYCDTF--TGGSGADSFVFTYQLQPV 1557
Query: 575 SYDDLWNVFGSDRS-AAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFD 633
D F S A G+ +S +F S + +D + +D
Sbjct: 1558 VNKDTIIDFQSGSDVLAFSKGSFTGITSSAGGLLSSAEFWSEAGATVGH--DSDDRIIYD 1615
Query: 634 HKKVDLYTDYFGDGN 648
+LY D G+G+
Sbjct: 1616 TATGNLYYDDDGNGS 1630
>gi|197106755|ref|YP_002132132.1| alkaline metalloproteinase [Phenylobacterium zucineum HLK1]
gi|196480175|gb|ACG79703.1| alkaline metalloproteinase [Phenylobacterium zucineum HLK1]
Length = 551
Score = 212 bits (540), Expect = 1e-52, Method: Composition-based stats.
Identities = 104/497 (20%), Positives = 162/497 (32%), Gaps = 64/497 (12%)
Query: 4 IKPVYTTERIADHLL---------------RDQYWSNYFIRYKPDVLTTHRLSFDITELN 48
K +T +R A L Q + + + + N
Sbjct: 33 GKESFTIDRAAKQLTGFDPVSGVPYGGWGPVGQAVTVSYAFRSNAPFEMPTDTTGFSRFN 92
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFM-------- 100
AL WS V ++ F + + S+N + Y
Sbjct: 93 AAQIAQTELALQAWSDVANIRFVRSGFGLSGEGAYSDNAQMLFSNYSGGQDGASAFATFP 152
Query: 101 -------EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN---GGYPVYGVD 150
++ + G +H +HEIGHA+GLMHPG Y+ +
Sbjct: 153 GRSAAAGDVWINITARDNSAPASGNYGAHVLVHEIGHAIGLMHPGDYDADATSNFTWSQH 212
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
+Y DS +VMSYF ++ Y ATP + DI A Q YG G+ +Y
Sbjct: 213 AEYFEDSRQYTVMSYFSESNTGASYGLRYPATPQLDDIAAAQIEYGPNWTTRTGDTVYGF 272
Query: 210 EVQ---------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
S + ++D+GG D LD + G + IDL +S++GG N+
Sbjct: 273 NSTAERPWFEAGSASSRVVFAVWDAGGTDTLDFSGYGQNQ-LIDLREGFFSNVGGLTGNV 331
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
IA+ VIE+ G SG D++ GN+ N F G D +G +G D F ++
Sbjct: 332 AIAKGAVIENARGGSGGDLINGNAQANALFGGVGGDTLNGEAGQD--FLRGEDGNDSLFG 389
Query: 321 FENAIIVYDANEHKQ----------DFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
++ +RL + + LE A +
Sbjct: 390 GAEFDDLHGNWGEDTVSGGDGGDWVVGGQGNDRLFGDEGGDAVLGNLGNDTLEGGAGNDV 449
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ G D+ G D G+ DL + FG A +
Sbjct: 450 VRGGQGDDLIAGGTGDDYMAGDRGNDTI-----SGGAGADLFHTFGG---AGLDRVLDFN 501
Query: 431 VKEGRNPDAFKALEYIA 447
EG + Y A
Sbjct: 502 AAEGDRVNVLAGTGYEA 518
>gi|166213401|ref|ZP_02239436.1| metalloprotease [Yersinia pestis biovar Antiqua str. B42003004]
gi|166205342|gb|EDR49822.1| metalloprotease [Yersinia pestis biovar Antiqua str. B42003004]
Length = 444
Score = 212 bits (540), Expect = 1e-52, Method: Composition-based stats.
Identities = 93/368 (25%), Positives = 149/368 (40%), Gaps = 40/368 (10%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF 81
+S D T + + I+ NP A+ A+ W+ V +++F E S S
Sbjct: 57 TYSFSRAYTLWDYDRTFQQNAYISLFNPAQIHQAKIAMQSWADVANISFTEASADSSANI 116
Query: 82 ISSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ N GY P S F I + + + HEIGHALGL
Sbjct: 117 LFLNFQRPSNVAGYAYYPNPGS--FSPIWINYSFSDNQHPSRLNDGGGVLTHEIGHALGL 174
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H + + + SVMSY Q S + Y +TP + DI A+Q +
Sbjct: 175 GHSHAPH-------------GYTQQMSVMSYLSEQGSGANYGQHYLSTPQMYDIAAIQYL 221
Query: 195 YGAP-KGSLGNNIYKIEVQQKDSPFIQT---------IYDSGGDDLLDLTLIGGVKNYID 244
YGA G+ +Y F T ++D+GG+D D + + I+
Sbjct: 222 YGANLHTRTGDTVYGFNSTSYRDHFTATHASDALIFCVWDAGGNDTFDFSGYKQNQ-MIN 280
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
LN +S +GG + N++IA IE+ + SG+D +IGN NN+ + G+D G+ G
Sbjct: 281 LNELCFSDVGGLKGNVSIAADVTIENAISGSGHDDIIGNHTNNILTGNGGSDQLWGNGGN 340
Query: 305 DTFFYYAPSYL-----YKIYRFENAIIVYDANE--HKQDFLSDVERLRFADQCIDSVNVK 357
+TF Y + I+ F++ D ++ D + V+RL F Q
Sbjct: 341 NTFRYASARDSMTTSPDTIHDFKSGRDKIDLSQLMPSTDRVIFVDRLSFNGQTEMGQQYN 400
Query: 358 QRSILEYT 365
+ + + Y
Sbjct: 401 EVADITYL 408
>gi|238897624|ref|YP_002923303.1| putative metalloprotease, Serralysin and RTX domains [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465381|gb|ACQ67155.1| putative metalloprotease, Serralysin and RTX domains [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 540
Score = 211 bits (537), Expect = 3e-52, Method: Composition-based stats.
Identities = 86/383 (22%), Positives = 138/383 (36%), Gaps = 52/383 (13%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEETSI---HSDIKFISSNN-----------GYVCTP 92
N + + L +S V ++ F E + I I N G P
Sbjct: 73 FTQNQIQKVKLILQFYSDVANVHFNEHKEEDINKKIHLIFFNYIKITPKSRFKRGAAYLP 132
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D I + + + HEIGHALGL H
Sbjct: 133 SRDGT--SPIWINAELEDNLNPNSKNLGNFTLNHEIGHALGLRHSHI------------- 177
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEV 211
++ + SVMSY+ + Y + P + DI +VQ +YGA + +GN IY
Sbjct: 178 SKSYTNKISVMSYYKEFQ----YNGYYPSGPQMYDIASVQYLYGANLETRIGNTIYGFNS 233
Query: 212 QQK---------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
D P I ++D+GG D D + + I+L + +S +GG + N++I
Sbjct: 234 NSGRPYLSAENADDPLIFCVWDAGGIDTFDFSGYRQNQ-RINLKSSQFSDVGGLKNNVSI 292
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYL 315
A +IE+ + SG+D +IGN +NV G D+ G G D F Y
Sbjct: 293 AYRVIIENAISGSGDDEIIGNEVDNVLRGGKGADLIYGEQGCDRLFGEEGNDRLYGGEGA 352
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
K+ + ++ ++ + + F V + R L + L+
Sbjct: 353 DKLVGGRGSDQLWGGKDNDYLLGGEDQDFLFGGQGNDPLVGGRGRDQLWGEKGDDTLLGE 412
Query: 375 IGQDVFESMKHFYEFGLSEGRDI 397
+G D + GRDI
Sbjct: 413 MGDDWLSGGIGSDKLTGGPGRDI 435
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 7/143 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G D L GG N L E + G + N +
Sbjct: 342 GNDRLYGGEGADKLVGGRGSDQL----WGGKDNDYLLGGEDQDFLFGGQGNDPLVGGRGR 397
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE--NAII 326
+ + G G+D ++G ++ G+D G G D F Y + + +
Sbjct: 398 DQLWGEKGDDTLLGEMGDDWLSGGIGSDKLTGGPGRDIFVYQTCDDSSTLSTDTICDFEV 457
Query: 327 VYDANEHKQDFLSDVERLRFADQ 349
D + + ++++ ++F D+
Sbjct: 458 GIDKIDLSRIT-NNIKNIQFVDR 479
>gi|330981411|gb|EGH79514.1| serralysin [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 476
Score = 210 bits (535), Expect = 5e-52, Method: Composition-based stats.
Identities = 98/382 (25%), Positives = 162/382 (42%), Gaps = 42/382 (10%)
Query: 3 NIKPVYTTERIADHLLRDQY------------WSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ AD++LRD + F+ KP +F + N
Sbjct: 39 NGKPSYSVDQAADYILRDDAAWTDRDGNGTINLTYTFLTAKPAGFDNSLGTF--SAFNAQ 96
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A ++ W+ V ++F + + D N + P +SR +
Sbjct: 97 QKAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGAAFAYLPSGNSRTDGQS 156
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ D G +EIGH LGL HPG YN G D Y D+
Sbjct: 157 WYLVDNNYKVNTTPDNGNYGRPTLTNEIGHTLGLSHPGDYNAGEGNPSYKDATYAEDTHG 216
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + G Y + P++ DI AVQ++YGA G+ +Y
Sbjct: 217 YSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYGFNSTAG 276
Query: 213 -------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
S + +++D GG D LD + + I+LN S+S +GG N++IA+
Sbjct: 277 RDFYSATSASSKVVFSVWDGGGKDTLDFSGFTQNQK-INLNAASFSDVGGMVGNVSIAKG 335
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
V+E+ VG SGND++IGN+A N +GND+ G G D+ + ++
Sbjct: 336 VVVENAVGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSL--TGGAGADIFVFGASSD 393
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
+ +DF+S +++ +
Sbjct: 394 SNRAGQDTIRDFVSGQDKIDVS 415
>gi|730411|sp|Q07162|PRTG_ERWCH RecName: Full=Secreted protease G; Short=ProG; Flags: Precursor
gi|297861|emb|CAA50501.1| protease G [Erwinia chrysanthemi]
Length = 475
Score = 210 bits (535), Expect = 5e-52, Method: Composition-based stats.
Identities = 89/394 (22%), Positives = 146/394 (37%), Gaps = 44/394 (11%)
Query: 4 IKPVYTTERIADHLLRD-------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
KP YT E+ D + R + F++ D + N
Sbjct: 40 DKPSYTLEQARDQITRGNITWNGEKVFGKSAALTYSFLQSVADSDMPDNFK-GFVKFNAA 98
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------------GYVCTPRYDSR 97
+ + AL W+ V ++TF E N + P +
Sbjct: 99 QIQQTKLALQSWADVANVTFSEAKDGERATIQFGNYTLTPDGNTDNNSQAFGFYPGNW-K 157
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DNDYEND 156
+ F+ + HEIGH LGL HPG Y+ G D Y D
Sbjct: 158 WAGSAWFNYNQADNQRPDINEFGRNTLTHEIGHTLGLYHPGDYDASDGNPGYKDVTYAED 217
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKD 215
+ S+MSY+ + D + A P DI A+QK+YGA G+ +Y
Sbjct: 218 TRQFSIMSYWNEGYTGGDFHGYHAAAP--HDIAAIQKLYGANMSTRTGDTVYGFHSNSGR 275
Query: 216 ---------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+P I +++D+GG+D D + + I L + ++S +GG + ++IA
Sbjct: 276 DFYTATDSKTPLIFSVWDAGGNDTFDFSGYSANQ-RISLISGTFSDVGGLKAMVSIAAGA 334
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
VIE+ +G SG+DV++GN ++N +GNDV G G D +
Sbjct: 335 VIENAIGGSGHDVIVGNLSDNRIDGGAGNDVLYGDGGADIL--TGGAGKDIFVYAWEKDS 392
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ A + DF +R+ + + +
Sbjct: 393 LSSAPDTITDFQRGEDRIDLSAFNKNHDLRFVDN 426
>gi|213970068|ref|ZP_03398200.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato T1]
gi|301381424|ref|ZP_07229842.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato
Max13]
gi|302058422|ref|ZP_07249963.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato K40]
gi|302130329|ref|ZP_07256319.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|213925172|gb|EEB58735.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato T1]
gi|331017237|gb|EGH97293.1| alkaline metalloendoprotease [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 475
Score = 210 bits (535), Expect = 5e-52, Method: Composition-based stats.
Identities = 95/382 (24%), Positives = 160/382 (41%), Gaps = 43/382 (11%)
Query: 3 NIKPVYTTERIADHLLRDQY------------WSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ A+ +LRD + F+ KP +F + N
Sbjct: 39 NGKPSYSVDQAANFILRDDAAWADRDGNGTINLTYTFLTAKPAGFNNALGTF--SAFNAQ 96
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A ++ W+ V ++F + + D N + P +
Sbjct: 97 QKAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSDGSNGGSAFAYLPSGGR-TDGQS 155
Query: 103 NFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ +D + G HEIGH LGL HPG YN G D Y D+
Sbjct: 156 WYLISDSYRQNVSPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGDGNPTYKDATYAEDTRG 215
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + G Y + P++ DI AVQ++YGA + +Y
Sbjct: 216 YSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDIAAVQQLYGANLSTRATDTVYGFNSTAG 275
Query: 213 -------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
S + +++D GG D LD + + I+LN S+S +GG N++IA+
Sbjct: 276 RDFYSATSASSKVVFSVWDGGGKDTLDFSGFTQNQK-INLNAASFSDVGGMVGNVSIAKG 334
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
V+E+ +G SGND++IGN+A N +GND+ G G D+ + ++
Sbjct: 335 VVVENAIGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSL--TGGAGADIFVFGASSD 392
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
A + +DF+S +++ +
Sbjct: 393 SNRAAQDTIRDFVSGQDKIDVS 414
>gi|28870496|ref|NP_793115.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato str.
DC3000]
gi|28853744|gb|AAO56810.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 475
Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats.
Identities = 94/382 (24%), Positives = 159/382 (41%), Gaps = 43/382 (11%)
Query: 3 NIKPVYTTERIADHLLRDQY------------WSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ A+ +LRD + F+ KP +F + N
Sbjct: 39 NGKPSYSVDQAANFILRDDAAWADRDGNGTINLTYTFLTAKPAGFNNALGTF--SAFNAQ 96
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A ++ W+ V ++F + + D N + P +
Sbjct: 97 QKAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSDGSNGGSAFAYLPSGGR-TDGQS 155
Query: 103 NFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ +D + G HEIGH LGL HPG YN D Y D+
Sbjct: 156 WYLISDSYRQNVSPDNGNYGRQTLTHEIGHTLGLSHPGDYNAVDGNPTYKDATYAEDTRG 215
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + G Y + P++ DI AVQ++YGA + +Y
Sbjct: 216 YSVMSYWSESNTDQNFVKGGASSYSSAPLLDDIAAVQQLYGANLSTRATDTVYGFNSTAG 275
Query: 213 -------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
S + +++D GG D LD + + I+LN S+S +GG N++IA+
Sbjct: 276 RDFYSATSASSKVVFSVWDGGGKDTLDFSGFTQNQK-INLNAASFSDVGGMVGNVSIAKG 334
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
V+E+ +G SGND++IGN+A N +GND+ G G D+ + ++
Sbjct: 335 VVVENAIGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSL--TGGAGADIFVFGASSD 392
Query: 326 IVYDANEHKQDFLSDVERLRFA 347
A + +DF+S +++ +
Sbjct: 393 SNRAAQDTIRDFVSGQDKIDVS 414
>gi|259414780|ref|ZP_05738703.1| rb139 [Silicibacter sp. TrichCH4B]
gi|259349231|gb|EEW60978.1| rb139 [Silicibacter sp. TrichCH4B]
Length = 660
Score = 208 bits (529), Expect = 3e-51, Method: Composition-based stats.
Identities = 117/423 (27%), Positives = 179/423 (42%), Gaps = 32/423 (7%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
V + + +AD L + + D ++++ +IT L Q++ARWA W +V
Sbjct: 151 VASLDEMADFLTDGYWQGTFRSGRNFDTSADNQITVNITGLTAAGQQLARWAFEAWERVA 210
Query: 67 DLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHN 123
+L F ET + +DI F + +G + + + W YG T
Sbjct: 211 NLEFVETGTGFADITFDDAASGAYAQSVVSGGTILSSVVNVSTSWLSNYGTDIDTYSFQT 270
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCAT 182
+HEIGHALGL H G+YN G YG D + NDS+ SVMSYF ++ +ASFGY +
Sbjct: 271 YVHEIGHALGLGHQGAYN-GNATYGTDETFINDSWQLSVMSYFDQVDNTTTNASFGYIVS 329
Query: 183 PMVSDIVAVQKIYGAPKG---SLGNNIYK--------------------IEVQQKDSPFI 219
M++DIVA+Q +YGAP + G+ + + F
Sbjct: 330 TMMADIVAIQNLYGAPDEDSETAGDTTWGANTTLTDSYLSEVFGALEGDFSFNMTGNDFA 389
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
TIYD G D +DL+ + IDLN ES+S + G N+ IA+ TVIE+V+ SGND
Sbjct: 390 LTIYDVSGTDTIDLS-PNTTNDRIDLNDESFSDVAGRIGNLGIARDTVIENVIAGSGNDT 448
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ GN N +G D+ G +G DT F A + + + + + D L
Sbjct: 449 ITGNEVGNEIHAGNGTDIISGGAGDDTIFGGADALDLRDVVYGGSGNDSIDGGYGNDELR 508
Query: 340 ---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + + +L +A + + G D D
Sbjct: 509 GDAGNDSIEGGFGSDTVIGGDGDDVLTGSALSDQVFGGAGSDFVNGGFGHDRVNGGGDAD 568
Query: 397 ITF 399
F
Sbjct: 569 KFF 571
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 85/268 (31%), Gaps = 18/268 (6%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN-----ALHEIGHAL 132
D +++ GY+ + ++ + D G T ++ L E+ AL
Sbjct: 316 DNTTTNASFGYIVSTMMADIVAIQNLYGAPDEDSETAGDTTWGANTTLTDSYLSEVFGAL 375
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
+ G + + D+ S + D ++ I
Sbjct: 376 EGDFSFNMTGNDFALTIYDVSGTDTIDLSPNTTNDRIDLNDESFSDVAGRIGNLGIARDT 435
Query: 193 KIYGAPKGSLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLL----------DLTLIGGVK 240
I GS + I EV + I GDD + D+ G
Sbjct: 436 VIENVIAGSGNDTITGNEVGNEIHAGNGTDIISGGAGDDTIFGGADALDLRDVVYGGSGN 495
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ ID + G N +I ++V+G G+DV+ G++ ++ F +G+D +G
Sbjct: 496 DSID-GGYGNDELRGDAGNDSIEGGFGSDTVIGGDGDDVLTGSALSDQVFGGAGSDFVNG 554
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVY 328
G D + + N +
Sbjct: 555 GFGHDRVNGGGDADKFFHLGVANHGSDW 582
>gi|238787699|ref|ZP_04631496.1| Metalloprotease [Yersinia frederiksenii ATCC 33641]
gi|238724042|gb|EEQ15685.1| Metalloprotease [Yersinia frederiksenii ATCC 33641]
Length = 416
Score = 207 bits (526), Expect = 5e-51, Method: Composition-based stats.
Identities = 87/295 (29%), Positives = 117/295 (39%), Gaps = 34/295 (11%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNG--------YVCTPRYD 95
I N A+ A+ + V ++ F + S + I N G Y P
Sbjct: 50 IFSFNRQQIRQAKIAMQSCADVANIQFIQASHNHSANLIFLNYGQPDGKNVGYAYYPS-- 107
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
F + + A + +HEIGHALGL H N
Sbjct: 108 PDNFSPVWTNFAVSNISSPTVINFGGYAFIHEIGHALGLGHSHGPN-------------G 154
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK 214
+ SVMSY QDS D S Y +TP + DI A+Q +YG GN Y
Sbjct: 155 HTQQVSVMSYLSEQDSGADYSGNYPSTPQMLDIAALQYLYGTNISTRTGNTTYGFNSNSN 214
Query: 215 DSPF---------IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
F I ++D+GG D D + +N I+LN S+S+IGG N++IA
Sbjct: 215 RPYFTAYKARDVLIFCVWDAGGIDTFDFSGYWQNQN-INLNEGSFSNIGGLIGNVSIATG 273
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
IE+ +G SGND + GNS NN G D G G +TF YY S
Sbjct: 274 VCIENAIGGSGNDNIWGNSENNRIAGGLGADQLWGGGGSNTFVYYRVSDSLTTSA 328
>gi|829594|gb|AAA86729.1| metalloprotease [Proteus mirabilis]
Length = 495
Score = 206 bits (525), Expect = 7e-51, Method: Composition-based stats.
Identities = 103/431 (23%), Positives = 169/431 (39%), Gaps = 58/431 (13%)
Query: 6 PVYTTERIADHLLR-DQYWSNYFI-------RYKPDVLTTHRLSF---DITELNPNAQEV 54
P + + H+ R D W+ ++ Y F + E N +E
Sbjct: 38 PSFDYDTAGKHIAREDSTWNGKYVIGQPAEVTYSFPKWEGKFNQFGNKNPYEFNELQKEH 97
Query: 55 ARWALGEWSKVVDLTFEETSIH-----------SDIKFI------SSNNGYVCTPR---Y 94
AR +L WS + ++ F E ++ +DI F + Y P Y
Sbjct: 98 ARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQAYATLPNTYAY 157
Query: 95 DSRYFMEINF-DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DND 152
+ F D G +HEIGH LGLMHPG YN G V G +D
Sbjct: 158 GKDLSGQAWFSDYHYAGNTTPELGNYGRLTIIHEIGHTLGLMHPGDYNAGQNVPGYLKSD 217
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEV 211
Y DS +VMSY+ ++ Y P++ DI A+Q +YGA G+++Y
Sbjct: 218 YAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGDDVYGFNS 277
Query: 212 QQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ I +++DSGG+D D + + IDL ++S +GG +KN++I
Sbjct: 278 NTGIDYYTATDSNDKLIFSVWDSGGNDTFDFSGFYQDQ-LIDLRAGNFSDVGGLQKNVSI 336
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
AQ+ IE+ +G GND++ GN A+N G+D+ G SG +T + ++
Sbjct: 337 AQNVTIENAIGGFGNDIIHGNDADNTLIGGEGDDIIYGHSGNNTIY--GGRGQDTLHGGT 394
Query: 323 NAII---------VYDANEHKQDFLSDVERLRFAD---QCIDSVNVKQRSILEYTASYED 370
+ + A + DF + ++++ + S + A
Sbjct: 395 GSNTFIYKEIADSLVTAADKIMDFKTGIDKIDLSTLIQDTFSSKILNFVDNFTGNAGEAT 454
Query: 371 LIQVIGQDVFE 381
L + E
Sbjct: 455 LSYNEVTNASE 465
>gi|3493596|gb|AAC33449.1| ZapA [Proteus mirabilis]
Length = 491
Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats.
Identities = 96/366 (26%), Positives = 152/366 (41%), Gaps = 46/366 (12%)
Query: 6 PVYTTERIADHLLR-DQYWSNYFI-------RYKPDVLTTHRLSF---DITELNPNAQEV 54
P + + H+ R D W+ ++ Y F + E N +E
Sbjct: 34 PSFDYDTAGKHIAREDSTWNGKYVIGQPAEVTYSFPKWEGKFNQFGNKNPYEFNELQKEH 93
Query: 55 ARWALGEWSKVVDLTFEETSIH-----------SDIKFI------SSNNGYVCTPR---Y 94
AR +L WS + ++ F E ++ +DI F + Y P Y
Sbjct: 94 ARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQAYATLPNTYAY 153
Query: 95 DSRYFMEINF-DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DND 152
+ F D G +HEIGH LGLMHPG YN G V G +D
Sbjct: 154 GKDLSGQAWFSDYHYAGNTTPELGNYGRLTIIHEIGHTLGLMHPGDYNAGQNVPGYLKSD 213
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEV 211
Y DS +VMSY+ ++ Y P++ DI A+Q +YGA G+++Y
Sbjct: 214 YAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGDDVYGFNS 273
Query: 212 QQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ I +++DSGG+D D + + IDL ++S +GG +KN++I
Sbjct: 274 NTGIDYYTATDSNDKLIFSVWDSGGNDTFDFSGFHQDQ-LIDLRAGNFSDVGGLQKNVSI 332
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
AQ+ IE+ +G GND++ GN A+N G+D+ G SG +T + ++
Sbjct: 333 AQNVTIENAIGGFGNDIIHGNDADNTLIGGEGDDIIYGHSGNNTIY--GGRGQDTLHGGT 390
Query: 323 NAIIVY 328
+
Sbjct: 391 GSNTFI 396
>gi|238797053|ref|ZP_04640556.1| Metalloprotease [Yersinia mollaretii ATCC 43969]
gi|238719098|gb|EEQ10911.1| Metalloprotease [Yersinia mollaretii ATCC 43969]
Length = 433
Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats.
Identities = 83/319 (26%), Positives = 128/319 (40%), Gaps = 27/319 (8%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSD 78
R S F + + D N A+ ++ W+ + +++F E +
Sbjct: 45 RGISLSYSFNIPVRNDMLDGLSPHDFFPFNQFQVNQAKKSMQAWADIANISFTEAVDFDN 104
Query: 79 IKFISSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ N +G+ P Y F + + + K HEIGH+
Sbjct: 105 VNIGFYNFSEKSIRSGFAFHPNYSR--FSGVYINHSFGENTKPTKSNYGGFTLTHEIGHS 162
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
LGL HP + G + + S+MSY+ S D +TP + D+ AV
Sbjct: 163 LGLKHPHNA-------GDTIKDQKHTHQVSIMSYYSESSSNADYCDDNVSTPQLYDVAAV 215
Query: 192 QKIYGAP-KGSLGNNIYKIEVQQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
Q +YGA K G+ IY I ++D+GG D D + +N
Sbjct: 216 QYLYGANMKTRTGDTIYGFNSNSERDFFTANAPTDKLIFCVWDAGGMDTFDFSGYSEDQN 275
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
I+L S+S +GG N++IA VIE+ +G SGND + GN ANN+ +G D G
Sbjct: 276 -INLKELSFSDVGGLTANISIAADVVIENAIGGSGNDTLYGNDANNILSGGAGADQLWGI 334
Query: 302 SGLDTFFYYAPSYLYKIYR 320
+G + F Y PS I
Sbjct: 335 NGHNVFRYDKPSDSTSISA 353
>gi|126729145|ref|ZP_01744959.1| Serralysin [Sagittula stellata E-37]
gi|126710135|gb|EBA09187.1| Serralysin [Sagittula stellata E-37]
Length = 858
Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats.
Identities = 122/511 (23%), Positives = 194/511 (37%), Gaps = 26/511 (5%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P Y+ +++A L + S R D L+F++++L+ + A A WS V
Sbjct: 39 PSYSLDQVAAQLTDGYWHSTGRARRSFDAEAGDTLTFNVSQLDSTGRATAIEAFEAWSAV 98
Query: 66 VDLTFEETSIHS-DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
L F+ T+ D F ++G + + + W+ G G
Sbjct: 99 SGLNFQITTSTGADFVFTDDSSGAYSYSYIAGQTITQSYVNVNTGWQ---GYGDYYLQTY 155
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQ-DSMMDASFGYCATP 183
+HEIGHALGL H G+YN G +G D Y+ DS+ S+MSYF + +AS Y AT
Sbjct: 156 IHEIGHALGLGHAGNYN-GSADFGTDAHYQQDSWQYSIMSYFGQWENPHTNASSNYLATT 214
Query: 184 MVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQK------DSPFIQTIYDSGGDDLLDLTLI 236
++DI+A+Q +YG P + GN +Y + + I+DS G D ++L
Sbjct: 215 QLADILAIQNLYGTPTNVNTGNTVYGDNTNLAQKGMGLSTQWAVAIFDSAGTDTINLGSR 274
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ +DL ++S + G N IA+ VIE+ SG D + NSANN SGND
Sbjct: 275 SANQ-RLDLRDGTFSDLNGEVGNFAIARGAVIENATTGSGRDSITTNSANNNIHSGSGND 333
Query: 297 VFDGSSGLDTFFYYAPS------YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
GS G DT A S + Y F + +E L FAD
Sbjct: 334 TIFGSDGNDTINGGAGSDLLAMGGAFTEYTFGCNGAATLTVNGNTTRFTGIETLTFADGT 393
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ + +TA+ D + ++ + TFDS L +
Sbjct: 394 AVVGSSANGQTITFTATGADYAACRVTVDTNNSANWSAY------TDTFDSSGTLLTRTT 447
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L + + + + + + + Y +D + D +
Sbjct: 448 LNDDGTIRTESFVGTAYSTTATDDGDQFDWDTITYDYDADDTLLRTTTVMDNGVRRVAEY 507
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
+N SY D G+
Sbjct: 508 ANGVATHMTATDLSDVYDWDSYTDTYAANGA 538
>gi|197284187|ref|YP_002150059.1| metalloprotease [Proteus mirabilis HI4320]
gi|227357937|ref|ZP_03842280.1| serralysin [Proteus mirabilis ATCC 29906]
gi|194681674|emb|CAR40753.1| metalloprotease [Proteus mirabilis HI4320]
gi|227161846|gb|EEI46875.1| serralysin [Proteus mirabilis ATCC 29906]
Length = 491
Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats.
Identities = 96/366 (26%), Positives = 152/366 (41%), Gaps = 46/366 (12%)
Query: 6 PVYTTERIADHLLR-DQYWSNYFI-------RYKPDVLTTHRLSF---DITELNPNAQEV 54
P + + H+ R D W+ ++ Y F + E N +E
Sbjct: 34 PSFDYDTAGKHIAREDSTWNGKYVIGQPAEVTYSFPKWEGKFNQFGNKNPYEFNELQKEH 93
Query: 55 ARWALGEWSKVVDLTFEETSIH-----------SDIKFI------SSNNGYVCTPR---Y 94
AR +L WS + ++ F E ++ +DI F + Y P Y
Sbjct: 94 ARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQAYATLPNTYAY 153
Query: 95 DSRYFMEINF-DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DND 152
+ F D G +HEIGH LGLMHPG YN G V G +D
Sbjct: 154 GKDLSGQAWFSDYHYAGNTTPELGNYGRLTIIHEIGHTLGLMHPGDYNAGQNVPGYLKSD 213
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEV 211
Y DS +VMSY+ ++ Y P++ DI A+Q +YGA G+++Y
Sbjct: 214 YAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGDDVYGFNS 273
Query: 212 QQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ I +++DSGG+D D + + IDL ++S +GG +KN++I
Sbjct: 274 NTGIDYYTATDSNDKLIFSVWDSGGNDTFDFSGFYQDQ-LIDLRAGNFSDVGGLQKNVSI 332
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
AQ+ IE+ +G GND++ GN A+N G+D+ G SG +T + ++
Sbjct: 333 AQNVTIENAIGGFGNDIIHGNDADNTLIGGEGDDIIYGHSGNNTIY--GGRGQDTLHGGT 390
Query: 323 NAIIVY 328
+
Sbjct: 391 GSNTFI 396
>gi|30410775|gb|AAC38255.2| alkaline protease [Pseudomonas fluorescens]
Length = 477
Score = 205 bits (522), Expect = 2e-50, Method: Composition-based stats.
Identities = 100/428 (23%), Positives = 166/428 (38%), Gaps = 41/428 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 38 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 97
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ WS V ++TF E + D N + P + Y
Sbjct: 98 QKAQAALAMQSWSDVANVTFTEKATGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 157
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + HEIGH+LGL HPG YN G D Y D+
Sbjct: 158 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHSLGLAHPGDYNAGEGAPTYNDATYGQDTRG 217
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 218 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNTG 277
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D GG+D LD + + I+LN S+S +GG N++IA+
Sbjct: 278 RDFLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQK-INLNEASFSDVGGLVGNVSIAKG 336
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+E+ G +GND++IGN+A NV +GND+ G G D + + ++
Sbjct: 337 VTVENAFGGAGNDLIIGNNAANVIKGGAGNDLIYGGGGADQL--WGGAGKDTFVFGASSD 394
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A + DF S +++ + + + A G ++
Sbjct: 395 SKPGAADKIFDFTSGSDKIDLSGIT-KGAGLTFVNAFTGHAGDAVFSYAAGTNLGTLAVD 453
Query: 386 FYEFGLSE 393
F G+++
Sbjct: 454 FSGHGVAD 461
>gi|1731424|sp|Q11137|ZAPA_PROMI RecName: Full=Extracellular metalloprotease; Flags: Precursor
Length = 491
Score = 205 bits (522), Expect = 2e-50, Method: Composition-based stats.
Identities = 96/366 (26%), Positives = 152/366 (41%), Gaps = 46/366 (12%)
Query: 6 PVYTTERIADHLLR-DQYWSNYFI-------RYKPDVLTTHRLSF---DITELNPNAQEV 54
P + + H+ R D W+ ++ Y F + E N +E
Sbjct: 34 PSFDYDTAGKHIAREDSTWNGKYVIGQPAEVTYSFPKWEGKFNQFGNKNPYEFNELQKEH 93
Query: 55 ARWALGEWSKVVDLTFEETSIH-----------SDIKFI------SSNNGYVCTPR---Y 94
AR +L WS + ++ F E ++ +DI F + Y P Y
Sbjct: 94 ARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQAYATLPNTYAY 153
Query: 95 DSRYFMEINF-DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DND 152
+ F D G +HEIGH LGLMHPG YN G V G +D
Sbjct: 154 GKDLSGQAWFSDYHYAGNTTPELGNYGRLTIIHEIGHTLGLMHPGDYNAGQNVPGYLKSD 213
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEV 211
Y DS +VMSY+ ++ Y P++ DI A+Q +YGA G+++Y
Sbjct: 214 YAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGDDVYGFNS 273
Query: 212 QQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ I +++DSGG+D D + + IDL ++S +GG +KN++I
Sbjct: 274 NTGIDYYTATDSNDKLIFSVWDSGGNDTFDFSGFYQDQ-LIDLRAGNFSDVGGLQKNVSI 332
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
AQ+ IE+ +G GND++ GN A+N G+D+ G SG +T + ++
Sbjct: 333 AQNVTIENAIGGFGNDIIHGNDADNTLIGGEGDDIIYGHSGNNTIY--GGRGQDTLHGGT 390
Query: 323 NAIIVY 328
+
Sbjct: 391 GSNTFI 396
>gi|312959818|ref|ZP_07774334.1| alkaline metalloprotease precursor AprA [Pseudomonas fluorescens
WH6]
gi|311285984|gb|EFQ64549.1| alkaline metalloprotease precursor AprA [Pseudomonas fluorescens
WH6]
Length = 552
Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 88/329 (26%), Positives = 135/329 (41%), Gaps = 35/329 (10%)
Query: 4 IKPVYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
KP Y+T++ A HL R WS+ K D+ T + R L W
Sbjct: 26 DKPSYSTDKAAKHLTRSGSRWSDRNKDKKIDLSYTLAP-----GFTSAEKHRIREGLKSW 80
Query: 63 SKVVDLTFEETSIHSDIKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYG-IGK 116
++V ++TF E + D G+ P YF E + + + +
Sbjct: 81 AEVTNVTFTENATGRDGVLKIKGLPDYPGGWATLPNP---YFEEGSVNVGTSRTHTKLEH 137
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
GT +HE+GHA+GL HP G Y D+ +VMSY
Sbjct: 138 GTQFDKTFVHEVGHAIGLKHPH---------GDVEPYREDTSAYTVMSYHDASFGDHPYE 188
Query: 177 FGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPF---------IQTIYDSG 226
+ PM+ DI AVQ++YGA + Y + + ++D+G
Sbjct: 189 RKKVSAPMLHDIAAVQRLYGANTETRKTDTTYGFNANAGRDFYTLKSARDKPVFCVWDAG 248
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D LD + + I L ES+S +GG N++IA+ +E+ VG G+D +IGN+AN
Sbjct: 249 GTDTLDFSGFRQDQK-ISLKAESFSDVGGMIGNVSIAKGVTVENAVGGFGHDTLIGNTAN 307
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N G D +G+ G + F Y +
Sbjct: 308 NRLTGGPGADTLEGNGGRNVFAYDNVTDS 336
>gi|3135220|dbj|BAA28268.1| metalloprotease [Pseudomonas fluorescens]
Length = 476
Score = 205 bits (520), Expect = 3e-50, Method: Composition-based stats.
Identities = 103/428 (24%), Positives = 167/428 (39%), Gaps = 42/428 (9%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ A LLRD + F+ ++ N
Sbjct: 38 NGKPSYSVDQAATQLLRDGAAYRDVDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 97
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ WS V ++TF E + D N + P + Y
Sbjct: 98 QKAQAALAMQSWSDVANVTFTEKATGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 157
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 158 WYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 217
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 218 YSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRAGDTTYGFNSNTG 277
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++D GG+D LD + + I+LN S+S +GG N++IA+
Sbjct: 278 RDFYSATSNADKLVFSVWDGGGNDTLDFSGFTQNQK-INLNEASFSDVGGLVGNVSIAKG 336
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ G SGND++IGN+A NV +GND+ G G D + + ++
Sbjct: 337 VTIEN-FGGSGNDLIIGNNAANVIKGGAGNDIIYGGGGADQL--WGGAGNDTFVYGASSD 393
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A++ DF S +++ + + + A L G ++
Sbjct: 394 SKPGASDKIFDFTSGSDKIDLSGIT-KGAGLTFVNAFTGHAGDAVLTYAAGTNLGTLAVD 452
Query: 386 FYEFGLSE 393
F G+++
Sbjct: 453 FSGHGVAD 460
>gi|149186450|ref|ZP_01864763.1| Serralysin [Erythrobacter sp. SD-21]
gi|148830039|gb|EDL48477.1| Serralysin [Erythrobacter sp. SD-21]
Length = 767
Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats.
Identities = 145/661 (21%), Positives = 216/661 (32%), Gaps = 107/661 (16%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
Y+ ++IA+ L + N +P + ++ L+ + +A A+ W+ V D
Sbjct: 148 YSLDQIANQLTSGYWGGNERAFTQP-------IFYEFVGLSQGEERLALEAMQYWATVAD 200
Query: 68 LTFEETSIHS---DIKFISSNNGYVCTPR--YDSRYFMEINFDKADVWRYGIGK--GTIL 120
+ F S S ++ F +S G + + + + + W G G+
Sbjct: 201 IDFSPASSGSSPANLIFQNSEEGAFAQSSVQFGNGGIVSSTVNVSAAWYAQYGSTLGSYT 260
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM----PQDSMMDAS 176
LHEIGHALGL H G+YN G Y D Y NDS+ T+VMSYF S +
Sbjct: 261 FQTYLHEIGHALGLGHAGNYN-GAASYANDATYLNDSWATTVMSYFDQSENTYFSQQGFN 319
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS--------PFIQTIYDSGGD 228
Y TPM++DIVA+Q +YGAP G++IY D+ TIYDSGG
Sbjct: 320 SVYVGTPMLADIVAIQNLYGAPSTRTGDDIYGFNSVGIDAVFNATLYPDIAYTIYDSGGH 379
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D LD + + IDL E +SS+GG N+ IA+ ++E +G SG D +IGN NV
Sbjct: 380 DTLDYSGFAADQ-VIDLRPEMYSSVGGNIGNVAIARGVILEDAIGGSGADQLIGNDVTNV 438
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLRFA 347
+ + G+DV DG D + + + A D + + L
Sbjct: 439 LWGNGGDDVIDGGILADIL--WGGDGNDTLVGSAGNDTLRGEAGNDTIDGGASWDYLFGG 496
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
L A + L G D+ G D+ +
Sbjct: 497 PGNDTLTGGNGNDGLFGDAGDDTLDGGAGADLLRGGGGEDYLDAGAGNDVIKGEWA---- 552
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
D L G D A + +I + + G+
Sbjct: 553 SDTLLGGDGDDIILAGDGL-----------------------DTVIAGSGNDLVYGEAGR 589
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
D D LY S DDL D L
Sbjct: 590 DTIYG--------ADGDDRLYGASEDDLLVGGDGD----------------------DEL 619
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDR 587
A + + + AG D F Y D F
Sbjct: 620 FGGAGDDRIAGRAGNDLLTGGAGNDLFV-------------FGDYGAGNVDTITDFQEGD 666
Query: 588 SAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
+ G + AD + + L+ D G+G
Sbjct: 667 KIGLDRSLLFGTID------KLGSLDLGAFRYGTQALDADDRILYQSSTGKLFYDADGNG 720
Query: 648 N 648
Sbjct: 721 A 721
>gi|299818421|gb|ADJ53339.1| metalloprotease zapA [Proteus mirabilis]
Length = 491
Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats.
Identities = 96/366 (26%), Positives = 152/366 (41%), Gaps = 46/366 (12%)
Query: 6 PVYTTERIADHLLR-DQYWSNYFI-------RYKPDVLTTHRLSF---DITELNPNAQEV 54
P + + H+ R D W+ ++ Y F + E N +E
Sbjct: 34 PSFDYDTAGKHIAREDSTWNGKYVIGQPAEVTYSFPKWEGKFNQFGNKNPYEFNELQKEH 93
Query: 55 ARWALGEWSKVVDLTFEETSIH-----------SDIKFI------SSNNGYVCTPR---Y 94
AR +L WS + ++ F E ++ +DI F + Y P Y
Sbjct: 94 ARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQAYATLPNTYAY 153
Query: 95 DSRYFMEINF-DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DND 152
+ F D G +HEIGH LGLMHPG YN G V G +D
Sbjct: 154 GKDLSGQAWFSDYYYAGNTTPELGNYGRLTIIHEIGHTLGLMHPGDYNAGQNVPGYLKSD 213
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEV 211
Y DS +VMSY+ ++ Y P++ DI A+Q +YGA G+++Y
Sbjct: 214 YAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGDDVYGFNS 273
Query: 212 QQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ I +++DSGG+D D + + IDL ++S +GG +KN++I
Sbjct: 274 NTGIDYYTATDSNDKLIFSVWDSGGNDTFDFSGFYQDQ-LIDLRAGNFSDVGGLQKNVSI 332
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
AQ+ IE+ +G GND++ GN A+N G+D+ G SG +T + ++
Sbjct: 333 AQNVTIENAIGGFGNDIIHGNDADNTLIGGEGDDIIYGHSGNNTIY--GGRGQDTLHGGT 390
Query: 323 NAIIVY 328
+
Sbjct: 391 GSNTFI 396
>gi|77459585|ref|YP_349092.1| epralysin. metallo peptidase. MEROPS family M10B [Pseudomonas
fluorescens Pf0-1]
gi|77383588|gb|ABA75101.1| putative metalloprotease [Pseudomonas fluorescens Pf0-1]
Length = 468
Score = 204 bits (518), Expect = 4e-50, Method: Composition-based stats.
Identities = 100/361 (27%), Positives = 152/361 (42%), Gaps = 50/361 (13%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP +T ++ AD +LR W + F+ KP + +E +
Sbjct: 30 NGKPSFTADQAADEILRKGMSWQDKNADGKIDLTYTFLTDKPSNYNAKLG--NFSEFSAQ 87
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-------GYVCTPRYDSRYFMEIN 103
+ A ++ WS V +TF E D N + P+ S Y +
Sbjct: 88 QKAQAVLSMQSWSDVAKVTFTE-GKGGDGHMTFGNYDVSTGGAAFAYLPQGSS-YDGQSW 145
Query: 104 FDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+ D + HEIGH LGL HPG+YN G D Y D+
Sbjct: 146 YLINDQYQVNKTPDANNYGRQTLTHEIGHTLGLSHPGAYNAGNGNPTYGDAKYAEDTRGY 205
Query: 161 SVMSYFMPQDSMM----DASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ--- 212
S+MSY+ ++ D S Y + P++ DIVAVQK+YGA + N +Y
Sbjct: 206 SLMSYWSEANTDQNFSKDGSGAYASAPLMDDIVAVQKLYGANFETRADNTVYGFNSNADR 265
Query: 213 ------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
S + +++D GG+D LD + + I+LN S+S +GG N++IA
Sbjct: 266 DFYSATSNTSKVVFSVWDGGGNDTLDFSGFNQNQK-INLNEGSFSDVGGLVGNVSIAHGV 324
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYLYK 317
+E+ +G SG+D++IGN+A N +GND+ G G DTF + A S
Sbjct: 325 TVENAIGGSGSDLLIGNAAANDLIGGAGNDIIYGGGGGDSLWGGEGADTFVFGAASDSTM 384
Query: 318 I 318
Sbjct: 385 T 385
>gi|238761252|ref|ZP_04622229.1| Metalloprotease [Yersinia kristensenii ATCC 33638]
gi|238761505|ref|ZP_04622481.1| Metalloprotease [Yersinia kristensenii ATCC 33638]
gi|238700479|gb|EEP93220.1| Metalloprotease [Yersinia kristensenii ATCC 33638]
gi|238700732|gb|EEP93472.1| Metalloprotease [Yersinia kristensenii ATCC 33638]
Length = 436
Score = 203 bits (516), Expect = 7e-50, Method: Composition-based stats.
Identities = 77/314 (24%), Positives = 114/314 (36%), Gaps = 32/314 (10%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN---------NGYVCTPRY 94
I+ LN R A+ S V ++ F E + + N GY +P
Sbjct: 73 ISALNQWQISQTRIAMQSISDVANIRFIEVNESVNANIPIVNVHPEQPISAAGYAYSPNQ 132
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
+ + HEI H LGL H
Sbjct: 133 R--NLSPVCINADFPENLTPTHSNYGGRVFTHEIMHTLGLKHTHDT-------------V 177
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ 213
+ SVMSY+ S D Y TP + DI A+Q +YG GN+IY
Sbjct: 178 RLTQQKSVMSYYSEWYSDADYGGHYAYTPQLYDIAALQYLYGPNMSTRTGNDIYTYSS-- 235
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
I I+D+ G D LD + + I+L S+S IGG + N++IA VIE+ +G
Sbjct: 236 --HAPILCIWDADGIDTLDFSYQTQDQ-VINLTAGSFSHIGGLKGNISIAYGVVIENAIG 292
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND + GN NV G+D G +G D + + + +
Sbjct: 293 GCGNDQLWGNKEVNVLAGGDGDDKLSGGNGADHL--WGGKGNNTFTYHHIEDSLTTSADT 350
Query: 334 KQDFLSDVERLRFA 347
DF S +++ +
Sbjct: 351 IHDFKSGEDKIDLS 364
Score = 37.5 bits (85), Expect = 7.3, Method: Composition-based stats.
Identities = 10/100 (10%), Positives = 22/100 (22%), Gaps = 7/100 (7%)
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ G+DT + + I + L + + +++
Sbjct: 242 IWDADGIDTLDFSYQTQDQVINLTAGSFSHIGG-------LKGNISIAYGVVIENAIGGC 294
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
L L G D +G +
Sbjct: 295 GNDQLWGNKEVNVLAGGDGDDKLSGGNGADHLWGGKGNNT 334
>gi|32456012|ref|NP_862014.1| rb139 [Ruegeria sp. PR1b]
gi|22726364|gb|AAN05160.1| RB139 [Ruegeria sp. PR1b]
Length = 643
Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats.
Identities = 120/414 (28%), Positives = 174/414 (42%), Gaps = 37/414 (8%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
T + +A++L + ++ R+ D + ++ +++ L+ AQ++ARWA W V DL
Sbjct: 164 TLDEMAEYLTDGYWEDSFDSRHSFDTSDSTEITVNLSALSSGAQQLARWAFEAWELVADL 223
Query: 69 TFEETSIHS-DIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHNAL 125
F ETS + DI F +++G T + + W YG + +
Sbjct: 224 EFVETSSSNVDILFRDNDSGAYATSSTSGGTIQSSEVNISQNWVSTYGSTISSYTFSTYI 283
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCATPM 184
HEIGHALGL H G YN G +YGVD + DS+ SVMSYF ++ +DAS+ A+ M
Sbjct: 284 HEIGHALGLGHQGDYN-GNAIYGVDETFALDSYQLSVMSYFSQEDNTEVDASYAEPASAM 342
Query: 185 VSDIVAVQKIYGA---PKGSLGNNIYKI------------------EVQQKDSPFIQTIY 223
++DI+A+Q++YGA S GN I+ D P TIY
Sbjct: 343 MTDIIAIQELYGAAGRNSASAGNTIWGANGTLDGYLADVFDGWGGSNANLGDEPVTITIY 402
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G D + N +DLN + S I G N+ IA+ TVIE GND VIGN
Sbjct: 403 DRDGID-MLDLSNNNSNNRLDLNDATASDINGLIGNLLIARDTVIEKAKMGRGNDTVIGN 461
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
ANN GND G +G D F + ++ D LS
Sbjct: 462 EANNRLLGGGGNDALSGGAGQDKMF--GGVGRDTLSGGAGQDKMFGG--AGWDQLSG--- 514
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ R L A + L+ +G D +G D
Sbjct: 515 ---EGGNDRLLGGSGRDTLSGGAGNDRLLGKLGHDTLNGGTGRDLMIGGKGADT 565
>gi|46241703|gb|AAS83088.1| putative protease-like protein [Azospirillum brasilense]
Length = 589
Score = 201 bits (510), Expect = 4e-49, Method: Composition-based stats.
Identities = 101/465 (21%), Positives = 153/465 (32%), Gaps = 95/465 (20%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFD---ITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
S F L+ D + L+ A+ R AL W+ V ++T E + +
Sbjct: 42 GVSLSYSFGVAGLSAYRDGYLTPDPGSVWTLSGTARAAIRQALNTWTAVANITCTEVADN 101
Query: 77 ----SDIKFISSNNGY--------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
D++F SN P +F + D + W G+
Sbjct: 102 ALSCGDLRFGGSNAPATAYTVLPVADIPEAGDVWFGPLFADPSLSW----ASGSYTYQTI 157
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HEIGHA GL H G +P+ D + S ++ SY M + TPM
Sbjct: 158 VHEIGHAFGLKHLHEEYGAFPIAPTGIDSQLYSTMSYR-SYPGAPPGMGYWQDRFPTTPM 216
Query: 185 VSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
V DI A+Q +YGA + G+ +Y Q +TI+D GG+D + I
Sbjct: 217 VDDIAAIQYLYGANMSTNAGDTVYSW---QPGQAIFETIWDGGGNDTISWANQTTD-ARI 272
Query: 244 DLNTESWSSIGGY--------EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
DL S+S +G + + IA IE+ +G SGND++IGN +N + +G+
Sbjct: 273 DLRPGSYSDLGPAWRAGFYMESRTLGIAYDCWIENAIGGSGNDILIGNERDNALYGGAGD 332
Query: 296 DV---------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
D DG G+DT + Y I R A V + L +E L F
Sbjct: 333 DTLIGGAGNNLLDGGDGVDTAVFEGAPTSYTI-RHSGAGEVTVDGPQGTNTLRSIEHLSF 391
Query: 347 ADQCI----------------------------------------------------DSV 354
D + V
Sbjct: 392 GDMTLALSRDATPGTVASTFFGVANSASGRQVLQEASTYSGPVQTLQWQLIGSDDGEAIV 451
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + G DV + G D F
Sbjct: 452 GGNGNDFINSRGGMDAIDGGAGDDVLDGGTGSNFLTGGAGHDTFF 496
>gi|240138687|ref|YP_002963159.1| hypothetical protein MexAM1_META1p2085 [Methylobacterium extorquens
AM1]
gi|240008656|gb|ACS39882.1| hypothetical protein, putative 5'-nucleotidase domain
[Methylobacterium extorquens AM1]
Length = 2794
Score = 200 bits (509), Expect = 5e-49, Method: Composition-based stats.
Identities = 84/358 (23%), Positives = 148/358 (41%), Gaps = 51/358 (14%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G+ D + G + +++ S+GND G G DT + + + +
Sbjct: 2453 DVLQGTPFADRLFGGAGDDIIVNSAGNDFLSGGRGNDTLVFNTSFASVTVTEAGSLTAIT 2512
Query: 329 DANEHKQDFLSDVERLRFADQCI--DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+D +S ER F+D I + + + + + ++ H+
Sbjct: 2513 --GPDGRDLVSGFERYLFSDATIVVNDGQPLVDDLFYLSRNKDVFQAG-----QDADAHY 2565
Query: 387 YEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 443
++G EGRD F + YL + ++R HY G KEGR+P F
Sbjct: 2566 AQYGAREGRDPNAFFSTKGYLAANPEVRAS----GANPLDHYEQAGWKEGRDPGVRFDNE 2621
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV------------TFDSYLYLGS 491
Y+A++ D+ A + H+ G EGR + FD+ YL +
Sbjct: 2622 FYLAANPDVKAAGLNP-------LAHYLAEGRAEGRAIHDAVGRSGDIRGGFDAEYYLLA 2674
Query: 492 YDDLRNVFGS--DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQ 548
+ D+ G+ AARH+ +G +EGRNP+A F Y+A++ D+ A
Sbjct: 2675 HADVAQAAGTTDTFAFAARHFEQYGWQEGRNPNAVFDTKGYLAAYGDVKAA-------GL 2727
Query: 549 AGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
H+ +G++EGR F+ YL++Y D+ QH++ +G+ EGR+
Sbjct: 2728 NPLTHYDQYGWKEGRDPSADFDSSTYLSTYTDVAAAKID----PMQHFLQYGLYEGRS 2781
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 15/145 (10%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDIT--FDSYLYLGSYD 409
+ + A + D F + +HF ++G EGR+ FD+ YL +Y
Sbjct: 2661 DIRGGFDAEYYLLAHADVAQAAGTTDTFAFAARHFEQYGWQEGRNPNAVFDTKGYLAAYG 2720
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKD 468
D++ HY +G KEGR+P F + Y++++ D+ A D
Sbjct: 2721 DVKAA----GLNPLTHYDQYGWKEGRDPSADFDSSTYLSTYTDVAAAKIDP-------MQ 2769
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYD 493
HF +G EGR D GS
Sbjct: 2770 HFLQYGLYEGRSTFADGTFGGGSLG 2794
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 65/217 (29%), Gaps = 17/217 (7%)
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L S G + L A + ++N+ + G D
Sbjct: 2432 LAARSDSVLARGVSRTGADGHDVLQGTPFADRLFGGAGDDIIVNSAGNDFLSGGRGNDTL 2491
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
VT L + D R++ G + + L Y+
Sbjct: 2492 VFNTSFASVTVTEAGSLTAITGPDGRDLV---SGFERYLFSDATIVVNDGQPLVDDLFYL 2548
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRS 588
+ ++D+ A Q H++ +G EGR F+ YL + ++ +
Sbjct: 2549 SRNKDVFQA-------GQDADAHYAQYGAREGRDPNAFFSTKGYLAANPEVRA----SGA 2597
Query: 589 AAAQHYITHGMKEGRALGIS-GMQFKSVMNLSEKSRD 624
HY G KEGR G+ +F N K+
Sbjct: 2598 NPLDHYEQAGWKEGRDPGVRFDNEFYLAANPDVKAAG 2634
>gi|229588355|ref|YP_002870474.1| putative protease [Pseudomonas fluorescens SBW25]
gi|229360221|emb|CAY47078.1| putative protease [Pseudomonas fluorescens SBW25]
Length = 495
Score = 200 bits (507), Expect = 8e-49, Method: Composition-based stats.
Identities = 95/389 (24%), Positives = 148/389 (38%), Gaps = 69/389 (17%)
Query: 7 VYTTERIADHLLR-DQYWSNY-----------FIRYKPDVLTTHRLSF-----DITELNP 49
T + +AD L R W + F +PD ++ LN
Sbjct: 40 SLTGKEVADRLTRTGHRWHDSNHNGRTELTYEFSTVEPDSFKKDQIDSRNKARKFVPLNA 99
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHS---DIKFISSNNGYVCTPRYDSRYFMEINFDK 106
++ R A E++ + +++F E + + + + G +P S +F + +
Sbjct: 100 RQKDYVRTAQQEYADIANISFTEKAGGGAEGHLIYNGYDTGSNVSPIRGSGFFPDPQGPE 159
Query: 107 --ADVWRYGIGK-----------------GTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
VW + I N +HEIGH +GL HP G
Sbjct: 160 RPGHVWMRNTDQASRFNEKEDGGFLEGFGDDIWRENLIHEIGHIVGLSHPH----GDSEE 215
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNI 206
DY+ + S+MSY P S + S G + M+ DI A+QK YGA G+
Sbjct: 216 EGLPDYQENWKNYSIMSYNTPLFSEAEDSGG-PVSLMIDDIAALQKTYGANHATRAGDTT 274
Query: 207 YKIEVQQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
Y D + ++D GG D LD + + I+LN S SS+GG
Sbjct: 275 YGFNSNSGREHSSLTSSDDKPLFAVWDGGGWDTLDFSGFSQNQ-VINLNAGSLSSVGGLS 333
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL---------DTFF 308
+N+ IA+ VIE G G +++IGN NV G DV G SG +TF
Sbjct: 334 RNVGIAEGAVIEEARGGKGRNILIGNEVFNVLRGGPGEDVMYGGSGGAQMWGGAGPNTFV 393
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ S N ++ + + + K D
Sbjct: 394 FDGAS-----SGKANWVMDFVSGKDKIDL 417
>gi|123444226|ref|YP_001008194.1| metalloprotease [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|122091187|emb|CAL14070.1| metalloprotease [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 492
Score = 200 bits (507), Expect = 9e-49, Method: Composition-based stats.
Identities = 97/432 (22%), Positives = 137/432 (31%), Gaps = 74/432 (17%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDI--TELNPNAQEVARWALGEWSKVVDLTFEETSIH---- 76
+ F + P ++ S I LN R A S V ++ F E
Sbjct: 50 VTYSFSQQIPIGYHYYKSSDGIQAYSLNEAQIHQVRTATLATSDVANIKFIEAEDGVIAN 109
Query: 77 ---SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+++ S GY +P I + + +HE GHALG
Sbjct: 110 IPIANVLLEGSLGGYAYSPN--PGNLSPIFINAKIEENLAPTQSNYGGRVFMHEFGHALG 167
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H D + TSVMSY +S + +TP + DI A+Q
Sbjct: 168 LEHTH-------------DSVGLTQQTSVMSYLSEFNSGAIYGGNFASTPQLHDISALQY 214
Query: 194 IYGAPK-GSLGNNIYKIEVQQKDSPFIQT---------IYDSGGDDLLDLTLIGGVKNYI 243
+YG +GN Y F T ++D+GG+D D + + I
Sbjct: 215 LYGTNNRTRIGNTTYGFNSNSNRDYFTATHASDKLVFCVWDAGGNDTFDFSGYHQNQ-RI 273
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L +S IGG N++IA VIE+ + SG+D + GN +NN G+D G G
Sbjct: 274 TLTKRGFSDIGGLRGNVSIADKVVIENAITGSGDDEINGNRSNNTLNGGDGDDRLWGRVG 333
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D F D LS K L
Sbjct: 334 NDRLF----------------------GGRGNDRLSG---------------GKGDDFLS 356
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGA 421
A + L G D + EG DI +S Y D F S
Sbjct: 357 GGAGNDRLAGGSGDDRLFGGRGADRMKGGEGCDIFQYRNSRDSTRKYTDTIIDFTSGEDK 416
Query: 422 AARHYITHGVKE 433
+I G
Sbjct: 417 IDLSFIMAGNNN 428
>gi|226328853|ref|ZP_03804371.1| hypothetical protein PROPEN_02754 [Proteus penneri ATCC 35198]
gi|225202039|gb|EEG84393.1| hypothetical protein PROPEN_02754 [Proteus penneri ATCC 35198]
Length = 390
Score = 200 bits (507), Expect = 1e-48, Method: Composition-based stats.
Identities = 90/325 (27%), Positives = 142/325 (43%), Gaps = 26/325 (8%)
Query: 46 ELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN--------NGYVCTP---RY 94
L + ++ AR +L WS + ++ F E + + N Y P Y
Sbjct: 2 GLIQHKKDHARQSLDAWSDIANIKFTEVAPGTKSDITFGNITDPYGQFQAYATLPNTYSY 61
Query: 95 DSRYFMEINF-DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-DND 152
+ F D G +HEIGH LGLMHPG YN G V G +D
Sbjct: 62 GRDLSGQAWFSDYYYAGNTTPELGNYGRLTIIHEIGHTLGLMHPGDYNAGQNVPGYLKSD 121
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEV 211
Y DS +VMSY+ ++ Y P++ DI A+Q +YGA G+++Y
Sbjct: 122 YAEDSRQYTVMSYWDEYETGAHFQGAYAGAPLLHDISAMQYLYGANTTTRTGDDVYGFNS 181
Query: 212 QQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ I +++DS G+D D + + IDL +S +GG +KN++I
Sbjct: 182 NTGIDYYTATSSNDKLIFSVWDSSGNDTFDFSGFYQDQ-IIDLREGHFSDVGGLQKNVSI 240
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
AQ IE+ +G SGND++ GN A+N+ GND+ G G D + S +
Sbjct: 241 AQGVTIENAIGGSGNDIIYGNDADNILIGGGGNDILYGGGGQDILWGDTGSNTFVYKEI- 299
Query: 323 NAIIVYDANEHKQDFLSDVERLRFA 347
+ + A + DF S ++++ +
Sbjct: 300 -SDSLASAADKIMDFKSGIDKIDLS 323
>gi|32456013|ref|NP_862015.1| rb140 [Ruegeria sp. PR1b]
gi|22726365|gb|AAN05161.1| RB140 [Ruegeria sp. PR1b]
Length = 509
Score = 199 bits (505), Expect = 2e-48, Method: Composition-based stats.
Identities = 117/454 (25%), Positives = 175/454 (38%), Gaps = 77/454 (16%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHR----LSFDITELNPNAQEVARWALGE 61
P + +A +L + + ++ D+T L Q +ARWAL
Sbjct: 61 PYGSLTELASYLTSGYWEDGGSSAHSFAATVGEISAHVITVDLTALTSTGQRLARWALDS 120
Query: 62 WSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFME---INFDKADVWRYGIGKGT 118
W +V DL F E + DI F S++G T +D +N + + YG +
Sbjct: 121 WEQVADLHFTEVTRGGDITFDDSDSGAYSTSSFDEDGNTLAATVNISQDWLATYGTTLAS 180
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY-FMPQDSMMDASF 177
+HEIGHALGL H G+YNG Y NDS+ SVMSY ++S + A +
Sbjct: 181 YSMTTFVHEIGHALGLGHLGNYNGSTGT----QIYANDSWQLSVMSYIAQSENSNVSADY 236
Query: 178 GYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDS--------------PFIQTI 222
+ + PM++DIVA+Q +YG P + G++ + P TI
Sbjct: 237 AFPSGPMMADIVAIQSLYGTPIESDDGDSTWGQGGTYSRYFTTLFASITDPTIEPIAFTI 296
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
YD GG D+LDL+ + ++LN +S++ G+ N+ IA TVIE++ GND V G
Sbjct: 297 YDVGGTDMLDLSG-SRTADVVNLNAGGFSNVAGHIGNLAIASGTVIENIKVGRGNDTVYG 355
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N+A+NV +G D+ G SG D F
Sbjct: 356 NAADNVIRGQTGWDLLHGGSGRDRIF---------------------------------- 381
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
R + A + L G D + + GRD F
Sbjct: 382 ------------GGMGRDTISGDAGNDRLFGKKGHDWLDGGEGNDILFGGLGRDTFF--- 426
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
G D+ F D A + G +
Sbjct: 427 YGFGHDADIIRDFDLDLDKLAFSALDFGNTDAET 460
>gi|238783933|ref|ZP_04627950.1| Metalloprotease [Yersinia bercovieri ATCC 43970]
gi|238715172|gb|EEQ07167.1| Metalloprotease [Yersinia bercovieri ATCC 43970]
Length = 441
Score = 198 bits (504), Expect = 2e-48, Method: Composition-based stats.
Identities = 74/309 (23%), Positives = 112/309 (36%), Gaps = 27/309 (8%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSD 78
+ F + D+ N A+ ++ W+ V ++ F E +
Sbjct: 45 YGISLNYSFNLPPRADEFLEVSADDVFSFNKMQVIQAKKSMQSWADVANIYFTEAAGDES 104
Query: 79 IKFISSNN-------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ G P I + + +H HEIGH
Sbjct: 105 AYLGFYSYLQDNNRHGAAYHPNN--LILSPIYLNSFSSDGKKPTQSNYGAHILTHEIGHT 162
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
LGL H + + + S+MSY Q S D +TP + DI AV
Sbjct: 163 LGLKHTHGA-------KNWPEEQQHTQQVSIMSYQSEQASGADYGGNSLSTPQLYDIAAV 215
Query: 192 QKIYGAP-KGSLGNNIYKIEVQ---------QKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
Q +YG GN Y I ++D+GG D D + +N
Sbjct: 216 QYLYGPNLTTRTGNTAYGFNSNSDRDFLTANTPTDKLIFCVWDAGGIDTFDFSGYTENQN 275
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
I LN S+S +GG N++IA VIE+ +G SGND ++GN +N+ +G D G
Sbjct: 276 -IYLNELSFSDVGGLVANISIAADVVIENAIGGSGNDKLVGNDVDNILTGGAGADHLWGD 334
Query: 302 SGLDTFFYY 310
G + F Y
Sbjct: 335 EGNNIFRYN 343
>gi|254561286|ref|YP_003068381.1| hypothetical protein METDI2865 [Methylobacterium extorquens DM4]
gi|254268564|emb|CAX24521.1| hypothetical protein, putative 5'-nucleotidase domain
[Methylobacterium extorquens DM4]
Length = 2796
Score = 198 bits (504), Expect = 2e-48, Method: Composition-based stats.
Identities = 83/358 (23%), Positives = 148/358 (41%), Gaps = 51/358 (14%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G+ D + G + +++ S+G+DV G G DT + + + +
Sbjct: 2455 DVLQGTPFADRLFGGAGDDIIVNSAGDDVLSGGRGNDTLVFNTSFASVTVTEAGSLTAIT 2514
Query: 329 DANEHKQDFLSDVERLRFADQCI--DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+D +S ER F+D I + + + + + ++ H+
Sbjct: 2515 --GPDGRDLVSGFERYLFSDATIVVNDGQPLVDDLFYLSRNKDVFQAG-----QDADAHY 2567
Query: 387 YEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 443
++G EGRD F + YL + ++R Y G KEGR+P F
Sbjct: 2568 AQYGAREGRDPNAFFSTKGYLAANPEVRAS----GANPLDQYEQAGWKEGRDPGVRFDNE 2623
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV------------TFDSYLYLGS 491
Y+A++ D+ A + H+ G EGR + FD+ YL +
Sbjct: 2624 FYLAANPDVKAAGLNP-------LAHYLANGQAEGRAIHDAVGRSGDIRGGFDAEYYLLA 2676
Query: 492 YDDLRNVFGS--DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQ 548
+ D+ G+ AARH+ +G +EGRNP+A F Y+A++ D+ A
Sbjct: 2677 HADVAQAAGTTDTFAFAARHFEQYGWQEGRNPNAVFDTKGYLAAYGDVKAA-------GL 2729
Query: 549 AGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
H+ +G++EGR + F+ YL++Y D+ QH++ G+ EGR+
Sbjct: 2730 NPLTHYDQYGWKEGRDPSAGFDSSTYLSTYTDVAAAKID----PMQHFLQDGLYEGRS 2783
Score = 80.6 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 46/260 (17%), Positives = 81/260 (31%), Gaps = 52/260 (20%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ + + +L+ T + L G D+ + G D
Sbjct: 2444 RGVSRTGAEGHDVLQGTPFADRLFGGAGDDIIVNSAGDDVLSGGRGNDTL---------- 2493
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
F S A +GR+ + Y+ S ++
Sbjct: 2494 -VFNTSFASVTVTEAGSLTAITGPDGRDLVSGFER-YLFSDATIVVNDGQPLV------- 2544
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-KAL 527
D YL D+ A HY +G +EGR+P+AF
Sbjct: 2545 ---------------DDLFYLSRNKDVFQAGQD----ADAHYAQYGAREGRDPNAFFSTK 2585
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGS 585
Y+A++ ++ + D + G++EGR F+ + YL + D+
Sbjct: 2586 GYLAANPEVRAS-------GANPLDQYEQAGWKEGRDPGVRFDNEFYLAANPDVKAA--- 2635
Query: 586 DRSAAAQHYITHGMKEGRAL 605
HY+ +G EGRA+
Sbjct: 2636 -GLNPLAHYLANGQAEGRAI 2654
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 69/240 (28%), Gaps = 19/240 (7%)
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L S G + L A + ++N+ D G D
Sbjct: 2434 LAARSDSVLARGVSRTGAEGHDVLQGTPFADRLFGGAGDDIIVNSAGDDVLSGGRGNDTL 2493
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
VT L + D R++ G + + L Y+
Sbjct: 2494 VFNTSFASVTVTEAGSLTAITGPDGRDLV---SGFERYLFSDATIVVNDGQPLVDDLFYL 2550
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRS 588
+ ++D+ A Q H++ +G EGR F+ YL + ++ +
Sbjct: 2551 SRNKDVFQA-------GQDADAHYAQYGAREGRDPNAFFSTKGYLAANPEVRA----SGA 2599
Query: 589 AAAQHYITHGMKEGRALGIS-GMQFKSVMNLSEKSRDKA--DLSLSFDHKKVDLYTDYFG 645
Y G KEGR G+ +F N K+ L+ + D G
Sbjct: 2600 NPLDQYEQAGWKEGRDPGVRFDNEFYLAANPDVKAAGLNPLAHYLANGQAEGRAIHDAVG 2659
>gi|260577026|ref|ZP_05845006.1| Serralysin [Rhodobacter sp. SW2]
gi|259020782|gb|EEW24098.1| Serralysin [Rhodobacter sp. SW2]
Length = 841
Score = 198 bits (503), Expect = 3e-48, Method: Composition-based stats.
Identities = 140/693 (20%), Positives = 243/693 (35%), Gaps = 67/693 (9%)
Query: 7 VYTTERIADHLLRDQY------WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG 60
V T + +A L + S D+ ++S+++T L +A+ AL
Sbjct: 142 VLTADEVAWQLTNNFERYFSGAGSANIPATAYDLSGGRQISYNVTGLTAPGAALAQQALQ 201
Query: 61 EWSKVVDLTFEETSIHSDIKFISSN---NGYVCTPRYDSRYFMEINFDKADVW--RYGIG 115
WS V +TF++TS + I F + + + + + W +G
Sbjct: 202 MWSDVTGITFQQTSGAAQITFQNDSVDVEAFNSNVTSPDGTIISSTLQVSTGWLTTFGTT 261
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY-------FMP 168
+ +HE+GH+LGL H G+YN G YGVDN Y NDS S+MSY F
Sbjct: 262 MDSYSFETYVHELGHSLGLGHGGNYN-GSATYGVDNYYLNDSPHLSIMSYMQAVNDEFDD 320
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYG------------APKGSLG----NNIYKIEVQ 212
++ ++A F Y TPM++DI+A++ +YG + G + +
Sbjct: 321 ANTFVNAQFRYVLTPMIADILAMRNLYGLSTTTRTGNTTYGYNSNTGNAALDAAVTLNDP 380
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
++ T++D+GG D ++L+ G + IDLN + S + G NM IA TV+E+ +
Sbjct: 381 ANNNYVAFTVFDNGGTDTINLSGYSGSQ-RIDLNQGASSDVLGGRLNMGIAYGTVVENAI 439
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G S D + GNSA N GND +G++G+DT +Y + I+ +A
Sbjct: 440 GGSAADSMTGNSAANSLSGLGGNDTLNGNTGVDTLI---GGLGDDVYVTDGGDIIVEAAA 496
Query: 333 HKQDFL---------SDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D + +++E L I++ +++ ++ L G D
Sbjct: 497 AGTDRVMSSASASLSANIENLTLTGAAAINAYGNALNNVITGNSANNVLSGGGGNDTLNG 556
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG--RNPDAF 440
G D+ G G+DR ++ Y E A
Sbjct: 557 TTGTDTMIGGLGDDVYTTD---GGDTLTEAAAAGTDRVMSSASYGLSVNLENLTLTGTAA 613
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR---N 497
+ + + G D + + +Y D
Sbjct: 614 INGYGNILNNIITGNSGNNVLGGGNGNDTLNGTTGADTMIGGLGDDVYTTDGGDAITEAA 673
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH--EDLINAFADAPDLVQAGKDHFS 555
G+DR ++ E A+ + + + AG D +
Sbjct: 674 AAGTDRVLSSASTSLSANVENLTLTGAAAINGYGNTLANQISGNSGNNVLNGGAGND--T 731
Query: 556 NFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSV 615
G FN + D + + + + I G L G+ +
Sbjct: 732 LSGGAGADVFIFNTAPSAANIDRITDFAAVNDT------IYLGSAVFAGLAAGGLAATAF 785
Query: 616 MNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
+ A + ++ L D G G
Sbjct: 786 ASNLTGLATDALDRIIYESDTGRLMFDADGTGA 818
>gi|218530329|ref|YP_002421145.1| 5'-nucleotidase domain protein [Methylobacterium chloromethanicum
CM4]
gi|218522632|gb|ACK83217.1| 5'-Nucleotidase domain protein [Methylobacterium chloromethanicum
CM4]
Length = 2796
Score = 197 bits (501), Expect = 4e-48, Method: Composition-based stats.
Identities = 82/358 (22%), Positives = 147/358 (41%), Gaps = 51/358 (14%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G+ D + G + +++ S+G+D G G DT + + + +
Sbjct: 2455 DVLQGTPFADRLFGGAGDDIIVNSAGDDFLSGGRGNDTLVFNTSFASVTVTEAGSLTAIT 2514
Query: 329 DANEHKQDFLSDVERLRFADQCI--DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+D +S ER F+D I + + + + + ++ H+
Sbjct: 2515 --GPDGRDLVSGFERYLFSDATIVVNDGKPLVDDLFYLSRNKDVFQAG-----QDADAHY 2567
Query: 387 YEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 443
++G EGRD F + YL + ++R Y G KEGR+P F
Sbjct: 2568 AQYGAREGRDPNAFFSTKGYLAANPEVRAS----GANPLDQYEQAGWKEGRDPGVRFDNE 2623
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV------------TFDSYLYLGS 491
Y+A++ D+ A + H+ G EGR + FD+ YL +
Sbjct: 2624 FYLAANPDVKAAGLNP-------LAHYLANGQAEGRAIHDAVGRSGDIRGGFDAEHYLLA 2676
Query: 492 YDDLRNVFGS--DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQ 548
+ D+ G+ AARH+ +G +EGRNP+A F Y+A++ D+ A
Sbjct: 2677 HADVAQAAGTTDTFAFAARHFEQYGWQEGRNPNAVFDTKGYLAAYGDVKAA-------GL 2729
Query: 549 AGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
H+ +G++EGR + F+ YL++Y D+ QH++ G+ EGR+
Sbjct: 2730 NPLTHYEQYGWKEGRDPSAGFDSSTYLSTYTDVAAAKID----PMQHFLQDGLYEGRS 2783
Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats.
Identities = 71/342 (20%), Positives = 112/342 (32%), Gaps = 68/342 (19%)
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
AP+ +I A + + L+ I+ +A +
Sbjct: 2423 TAPAADARIQNLAARYDSVLARGVSRTGADGHDVLQGTPFADRLFGGAGDDIIVNSAGDD 2482
Query: 370 DLIQVIGQDVFESMKHFYE-----------FGLSEGRD---------------------I 397
L G D F +GRD
Sbjct: 2483 FLSGGRGNDTLVFNTSFASVTVTEAGSLTAITGPDGRDLVSGFERYLFSDATIVVNDGKP 2542
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAF 456
D YL D+ A HY +G +EGR+P+ F Y+A++ ++ +
Sbjct: 2543 LVDDLFYLSRNKDVFQA----GQDADAHYAQYGAREGRDPNAFFSTKGYLAANPEVRASG 2598
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
A+ D + G +EGR FD+ YL + D++ + HY+ +G
Sbjct: 2599 ANP-------LDQYEQAGWKEGRDPGVRFDNEFYLAANPDVKAAGLN----PLAHYLANG 2647
Query: 515 VKEGRNP-----------DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
EGR F A Y+ +H D+ A D HF +G++EGR
Sbjct: 2648 QAEGRAIHDAVGRSGDIRGGFDAEHYLLAHADVAQAAGT-TDTFAFAARHFEQYGWQEGR 2706
Query: 564 SIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+ F+ YL +Y D+ HY +G KEGR
Sbjct: 2707 NPNAVFDTKGYLAAYGDVKAA----GLNPLTHYEQYGWKEGR 2744
>gi|294675715|ref|YP_003576330.1| M10 family peptidase [Rhodobacter capsulatus SB 1003]
gi|294474535|gb|ADE83923.1| peptidase, M10 family [Rhodobacter capsulatus SB 1003]
Length = 586
Score = 197 bits (501), Expect = 4e-48, Method: Composition-based stats.
Identities = 113/396 (28%), Positives = 174/396 (43%), Gaps = 28/396 (7%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
T + +AD+L+ + SN D + + ++ D+ L + Q++ARWAL WS V +L
Sbjct: 139 TIDDLADYLVNGYWESNGGQARSFDTTSDNVITVDLHNLTADGQQLARWALQAWSAVANL 198
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHNALH 126
F ET+ +DI+F S++G T + W YG +H
Sbjct: 199 VFVETTGTADIEFDDSDDGAYSTSNTTGTRINSSFVNIDTAWIANYGTTMDGYSLQTYIH 258
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCATPMV 185
EIGHALGL H G+YN G Y D + NDS+ SVMSYF ++ ASF + + M+
Sbjct: 259 EIGHALGLGHQGAYN-GSATYPDDATFPNDSWHLSVMSYFSQDDNTTSGASFAWVMSAMM 317
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQ-------------------KDSPFIQTIYDSG 226
SDI+A+Q +YGA +LG+ +Y P TIYD+G
Sbjct: 318 SDIIAMQSMYGASTTTLGSTVYGRNSNVGGYLETLFDSLVAGTSATYGGDPVTMTIYDAG 377
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D +D + V ++L S+S++ G N+ IA+ TVIE V +GND+++GN+A+
Sbjct: 378 GRDTIDFS-FSNVNQTLNLAPGSFSNLAGLVGNLGIARGTVIEIGVTGNGNDLIMGNNAS 436
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
N GND G +G D + I + +D +
Sbjct: 437 NTLMSRGGNDTLRGGAGNDKL--DGGTGNDFIDGSTGQDTLIGG--AGKDTFLFNVAVTA 492
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
A+ I + + S+ I G +
Sbjct: 493 ANADIITDFSVVDDTIRLDRSFFTGIAATGTLTANA 528
Score = 40.9 bits (94), Expect = 0.72, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 35/127 (27%), Gaps = 7/127 (5%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWN 581
L A ++ L + G+D + G + FN + + D + +
Sbjct: 443 GGNDTLRGGAGNDKLDGGTGNDFIDGSTGQD--TLIGGAGKDTFLFNVAVTAANADIITD 500
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYT 641
D + G+ ++ F A + ++ L+
Sbjct: 501 FSVVDDTIRLDRSFFTGIA--ATGTLTANAFTKN---ITGLATDALDRIIYETDSGALWY 555
Query: 642 DYFGDGN 648
D G G
Sbjct: 556 DADGTGA 562
>gi|296532125|ref|ZP_06894892.1| metallophosphoesterase [Roseomonas cervicalis ATCC 49957]
gi|296267549|gb|EFH13407.1| metallophosphoesterase [Roseomonas cervicalis ATCC 49957]
Length = 2039
Score = 197 bits (500), Expect = 5e-48, Method: Composition-based stats.
Identities = 93/351 (26%), Positives = 147/351 (41%), Gaps = 51/351 (14%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G V+G + ++V SGN + DG +G DT Y++ + + +
Sbjct: 1716 APGGVRQVLGGAGDDVLQAGSGNVLVDGGAGHDTVVLTGGIGGYQML--RSGAELLLSAA 1773
Query: 333 HKQDFLSDVERLRFADQCID--SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
L ++E +RFAD ++ N + A+ + L + H+ ++G
Sbjct: 1774 DGAVTLRNIEAVRFADGLVELAHANTLFDPLHYMRANADVLASG-----MTAEAHYDQYG 1828
Query: 391 LSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIA 447
EGRD F + YL + D+ +HY+ HG EGR+P F A Y+A
Sbjct: 1829 WREGRDPNAVFSTGGYLSANGDVEAA----GLNPLQHYLQHGAAEGRDPSAQFDAQFYLA 1884
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV----------TFDSYLYLGSYDDLRN 497
+ D+ A +H+ N+G EGR FD+ YL + D+
Sbjct: 1885 RNADVARAGLG-------ALEHYLNYGMAEGRVTGPAIGQRVEAGFDAEYYLLANADVGA 1937
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
RG H++ HG EGRNP+A F Y+A++ D+ A P +H+S
Sbjct: 1938 AGVDARG----HWLQHGQVEGRNPNAYFDTRFYLAANTDVAAA-GMDPL------EHYSR 1986
Query: 557 FGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
FG++EGR + F+ YL D+ +HY+T G EGR L
Sbjct: 1987 FGWQEGRQPSAAFDAGAYLRINPDVAAA----GVNPLEHYLTFGHLEGRVL 2033
Score = 86.8 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 18/134 (13%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
FD Y+ + D+ + A HY +G +EGR+P+A F Y++++ D+ A
Sbjct: 1799 TLFDPLHYMRANADVLASGMT----AEAHYDQYGWREGRDPNAVFSTGGYLSANGDVEAA 1854
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
H+ G EGR + F+ YL D+ A +HY+ +
Sbjct: 1855 -------GLNPLQHYLQHGAAEGRDPSAQFDAQFYLARNADVARA----GLGALEHYLNY 1903
Query: 598 GMKEGRALGISGMQ 611
GM EGR G + Q
Sbjct: 1904 GMAEGRVTGPAIGQ 1917
>gi|238757396|ref|ZP_04618582.1| Metalloprotease [Yersinia aldovae ATCC 35236]
gi|238704435|gb|EEP96966.1| Metalloprotease [Yersinia aldovae ATCC 35236]
Length = 422
Score = 197 bits (500), Expect = 6e-48, Method: Composition-based stats.
Identities = 81/336 (24%), Positives = 132/336 (39%), Gaps = 33/336 (9%)
Query: 23 WSNYFIRYKPDVLTTHRLS--FDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSD-- 78
+ F P + L+ I+ LN + A+ S V +++F E
Sbjct: 37 VTYSFPESIPSNYYYYELNHKIPISSLNQLQIDQAKSTFRNISDVANISFTEVKYTEVNI 96
Query: 79 --IKFISSNN----GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ F N G+ P + F + + H +HEI HA+
Sbjct: 97 PIVNFHPENYISVGGFAYYPN--AGEFTPVCINADVSENLAPTHLNSGGHVIVHEILHAV 154
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
GL H + SVMSYF Q S + + +TP + DI A+Q
Sbjct: 155 GLKHTHDTA-------------GLTQRESVMSYFSEQYSGANYGGHHVSTPQLYDIAALQ 201
Query: 193 KIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+YGA G++IY I I+D+GG D+LD + + I+L S+S
Sbjct: 202 YLYGANMHTRTGHDIYTYSH----HTPILCIWDAGGTDMLDYSDQNQDQ-VINLTAGSFS 256
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++GG N++IA VIE+ +G SGND ++GN + NV G+D G G D +
Sbjct: 257 NVGGLAGNVSIAYGVVIENAIGGSGNDELLGNESVNVLASGGGDDKLSGGGGADQL--WG 314
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ +++ DF +++ +
Sbjct: 315 GKGHDTFIYRRAEDSLTTSSDTIHDFEVGKDKIDLS 350
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 26/123 (21%), Gaps = 9/123 (7%)
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ G D Y + I + V +++
Sbjct: 228 IWDAGGTDMLDYSDQNQDQVINLTAGSFSNVGGLAGNVSIAYGVVI-------ENAIGGS 280
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVF 415
L S L G D + +G D + L + D + F
Sbjct: 281 GNDELLGNESVNVLASGGGDDKLSGGGGADQLWGGKGHDTFIYRRAEDSLTTSSDTIHDF 340
Query: 416 GSD 418
Sbjct: 341 EVG 343
>gi|238751201|ref|ZP_04612696.1| Metalloprotease [Yersinia rohdei ATCC 43380]
gi|238710679|gb|EEQ02902.1| Metalloprotease [Yersinia rohdei ATCC 43380]
Length = 448
Score = 197 bits (500), Expect = 6e-48, Method: Composition-based stats.
Identities = 78/322 (24%), Positives = 126/322 (39%), Gaps = 34/322 (10%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
+ ++S + T++ I N A+ A+ + ++ F ETS
Sbjct: 55 ITNKIFYSFSQSYSLWESDITYQQDAPIFPFNQQQIRQAKLAMQSCADAANIHFMETSQD 114
Query: 77 SDIKFISSNN--------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + N GY P F + + A + + + HE+
Sbjct: 115 NPANLLFLNYEQQDVTIAGYAYYPGQGD--FSPLWINFAHCDAANPTQTSYSALILTHEL 172
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH LGL H + + + + SVMSY Q S D + +TP + DI
Sbjct: 173 GHTLGLKHTHNPD-------------SYTQQVSVMSYLSEQSSDADYLGHHPSTPQMLDI 219
Query: 189 VAVQKIYGAPK-GSLGNNIYKIEVQQK---------DSPFIQTIYDSGGDDLLDLTLIGG 238
A+Q +YGA LGN Y I ++D+GG D D +
Sbjct: 220 AALQYLYGANPHTRLGNTTYGFNSNSSREYLTANNASDILIFCVWDAGGIDTFDFSGYKQ 279
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ I+LN S+S +GG + N++IA +IE+ +G G+D + GN A+N G D
Sbjct: 280 NQ-TINLNQLSFSDVGGLKGNISIAADVIIENAIGGDGDDNIKGNKADNRLTGGGGADQL 338
Query: 299 DGSSGLDTFFYYAPSYLYKIYR 320
G+ G +TF Y + S
Sbjct: 339 WGNQGYNTFVYQSVSDSLTTAA 360
>gi|254471210|ref|ZP_05084612.1| secreted alkaline metalloproteinase [Pseudovibrio sp. JE062]
gi|211959356|gb|EEA94554.1| secreted alkaline metalloproteinase [Pseudovibrio sp. JE062]
Length = 530
Score = 196 bits (499), Expect = 8e-48, Method: Composition-based stats.
Identities = 114/380 (30%), Positives = 180/380 (47%), Gaps = 16/380 (4%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
+T ++IA L + S R DV L+ ++ LN + +E+A AL W+ V
Sbjct: 142 AFTNDQIAAQLTDGYWNSTGRGRRAFDVSPGESLTVNLNGLNSSGRELATKALEAWTMVT 201
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHNA 124
+ F S ++ I F +++G + + + W RYG
Sbjct: 202 GIEFRTVSSNAQITFDDNDSGAYANSTTRGSTILSSTVNVSTDWVARYGTDLDGYAFQTY 261
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCATP 183
+HEIGHALGL H G+YN G YGVDN Y NDS+ ++MSYF +++ +DAS Y TP
Sbjct: 262 VHEIGHALGLGHAGNYN-GAATYGVDNHYSNDSWQATIMSYFDQVENTNVDASRAYVVTP 320
Query: 184 MVSDIVAVQKIYG-APKGSLGNNIYKIEVQQKD--------SPFIQTIYDSGGDDLLDLT 234
M++DI+A+Q +YG A G+ +Y +P TI D+GG+D ++ +
Sbjct: 321 MIADILAMQDLYGTATDLRTGSTVYGENSTAGGYYDDIADLNPATFTIMDNGGNDSINFS 380
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ + I L E++S + G NMTI + TVIE+ SGND +IGN A+N + ++G
Sbjct: 381 SVRADQK-ISLVAETYSDVNGLTGNMTIMRDTVIENAYSGSGNDELIGNDADNGLYANAG 439
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND +G G DT + S + A + D + DF+ E + +
Sbjct: 440 NDTLEGGLGDDTLSGGSGSDTFVFNINCGADTIID-FSNGLDFMK-FESGADSFADLSIQ 497
Query: 355 NVKQRSILEYTASYEDLIQV 374
+ +++ Y L V
Sbjct: 498 DTGADTVINYDGGSITLSGV 517
>gi|197284189|ref|YP_002150061.1| metalloprotease [Proteus mirabilis HI4320]
gi|194681676|emb|CAR40761.1| putative metalloprotease [Proteus mirabilis HI4320]
Length = 654
Score = 196 bits (499), Expect = 9e-48, Method: Composition-based stats.
Identities = 84/300 (28%), Positives = 123/300 (41%), Gaps = 22/300 (7%)
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
G+ + H +HE+GH+LGL H Y DS SVMSY P D
Sbjct: 280 GSFVYHTFIHELGHSLGLFHIWEYILNEKHK------VLDSIKYSVMSYKCPDIKDADFG 333
Query: 177 FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPF---------IQTIYDSG 226
Y T M+ DI+ +Q +YG L NN Y + + + I+D+G
Sbjct: 334 GLYPMTFMLVDILLLQYLYGENMTTRLENNTYGFNSNTGRAAYSLNSIEDKLVSCIWDAG 393
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D LD +L + I+LN +S IGG N++IA T+IE+ +G G+D +IGN +
Sbjct: 394 GIDTLDFSLYTVNQ-VINLNEGCFSDIGGLRSNISIAYKTIIENAIGGKGDDTLIGNPFD 452
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
N GND+F G G D F+ S IY ++Y + D L D
Sbjct: 453 NNLIGGDGNDLFYGGDGNDLFY--GGSGNDVIYGELGNDVLY--GDDGDDMLIDYYGANM 508
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
D + + S ++ G D + +G D F+ + Y G
Sbjct: 509 LDGGKGNDRICVASTDRGLPGRNIILGGEGDDEIYLGTGTHRITGGQGND-AFNFFCYEG 567
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 48/389 (12%), Positives = 106/389 (27%), Gaps = 50/389 (12%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKAD 108
P+ Q+V L S +V + F++ S +++ +
Sbjct: 137 PHQQKVIEEILQHTSDIVPIFFKKISPYTNADLKFGYYNQFVNISGTKFISGYRKGSASH 196
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
G I + H+ + + ++Y + + Y
Sbjct: 197 PNEEGTPIKEI-KPDEEHDDPGTIFIDFSSREYYKTIKQDNIDEYIENEADIYDIYYINN 255
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY-KIEVQQKDSPFIQTIYDSGG 227
++ A ++K Y K +G+ +Y + S + I++
Sbjct: 256 DKTITIARGN----------NELRKEYQQNKHKIGSFVYHTFIHELGHSLGLFHIWEYIL 305
Query: 228 D------DLLDLTLIGGVKNYI-DLNTESW-------------SSIGGYEKNMTIAQHTV 267
+ D + +++ I D + + G + +T
Sbjct: 306 NEKHKVLDSIKYSVMSYKCPDIKDADFGGLYPMTFMLVDILLLQYLYGENMTTRLENNTY 365
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + NS + + G+DT + + I E
Sbjct: 366 GFNSNTGRAAYSL--NSIEDKLVS-----CIWDAGGIDTLDFSLYTVNQVINLNEGCFSD 418
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
S++ + + +++ K L +LI G D+F
Sbjct: 419 IGG------LRSNI-SIAYKTIIENAIGGKGDDTLIGNPFDNNLIGGDGNDLFYGGDGND 471
Query: 388 EFGLSEGRDITF----DSYLYLGSYDDLR 412
F G D+ + + LY DD+
Sbjct: 472 LFYGGSGNDVIYGELGNDVLYGDDGDDML 500
>gi|209966405|ref|YP_002299320.1| Alkaline Protease, putative [Rhodospirillum centenum SW]
gi|209959871|gb|ACJ00508.1| Alkaline Protease, putative [Rhodospirillum centenum SW]
Length = 674
Score = 196 bits (498), Expect = 1e-47, Method: Composition-based stats.
Identities = 101/409 (24%), Positives = 167/409 (40%), Gaps = 56/409 (13%)
Query: 4 IKPVYTTERIADHLLR-DQYWS-------NYFIRYKP-DVLTTHRLSFDITELNPNAQEV 54
K ++ T+ IADHL+R W+ FI ++P + + + + + + +E
Sbjct: 212 GKAIWDTDTIADHLIRTGTAWAAPGGVVRYGFIDHRPAEGYSPNGEAEGFSPFSAAQREA 271
Query: 55 ARWALGEWSKVVDLTFEETS--IHSDIKFISSNNG----YVCTPRYDSRYFMEINFDKAD 108
AR A W V+ + F E + I+F ++ G + P + ++ +
Sbjct: 272 ARQAAALWDDVLAIRFVEDTRPDGGQIRFANTTTGPGQAWAYFPDARAAAGGDVWVNPDQ 331
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP---VYGVDNDYENDSFLTSVMSY 165
+ G +HE+GHALGL HPG Y+ G Y +Y DS S+MSY
Sbjct: 332 ASNLELAPGYYGLTTLVHEMGHALGLSHPGDYDAGDDGEISYAASAEYFQDSRQYSIMSY 391
Query: 166 FMPQDSMMDA------SFGYCATPMVSDIVAVQKIYGA-------------PKGSLGNNI 206
+ + + D F Y A+PM+ DI A Q++YGA + +
Sbjct: 392 WDARLTGADHVDWWDLRFVYAASPMLHDIAAAQRLYGADRTTRTGDTTYGFNASADLADR 451
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK-------- 258
+ + P + ++D+GG D LD + + +DL ++SS GG
Sbjct: 452 PSFDFTRNTQPVV-ALWDAGGTDTLDFSGF-DTPSVLDLRQGAFSSGGGRADVPADYAAQ 509
Query: 259 -------NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
N+ IA TVIE+ VG SG+D+VIGN N +G D G+ G DT
Sbjct: 510 GDSLLKQNIAIAFGTVIENAVGGSGDDLVIGNEVANRLDGGAGADTLVGAQGRDTLVGGG 569
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
L+++ + A + DF +R+ + D +
Sbjct: 570 GDDLFRL--VRSGDSPVRAPDVIVDFDQGDDRIDLSAMDADLHRAGDQD 616
>gi|197284192|ref|YP_002150064.1| metalloprotease [Proteus mirabilis HI4320]
gi|194681679|emb|CAR40769.1| putative metalloprotease [Proteus mirabilis HI4320]
Length = 649
Score = 190 bits (482), Expect = 8e-46, Method: Composition-based stats.
Identities = 96/440 (21%), Positives = 149/440 (33%), Gaps = 94/440 (21%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------------GYVCTPRY 94
P+ QEV L S DLTF I + G+ P Y
Sbjct: 135 PHQQEVVTEILQLASDFADLTFTRVPIQKNANLKFGYYKQFATGYYMTRETVGFASKPNY 194
Query: 95 DS------------------------------------RYFMEINFDKADVWRYGIGK-- 116
+ ++E + D++ Y
Sbjct: 195 NGTPIKEIGQNESYDFSGSIFINLASHDFYQWVKRDNLDKYIENEANIGDLYNYHDNNQV 254
Query: 117 --------------------GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
G+ + + LHE+GHALGL H +Y + +
Sbjct: 255 AIIKSTDVLLNETMKSKHKLGSQIYYVFLHELGHALGLEHIDAY------LKNIKNSAIE 308
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKD 215
++ +VM D Y T M+ DI+ +Q +YG L NN Y
Sbjct: 309 TYKYTVMGMGFADIKDADFGGLYPMTFMLVDILLLQYLYGPNMTTRLENNTYGFNSNTGR 368
Query: 216 SPF---------IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + + I+D+GG D LD +L + I+LN +S IGG N++IA T
Sbjct: 369 AAYSLKSIEDKLVSCIWDAGGIDTLDFSLYTVNQ-VINLNEGCFSDIGGLRSNISIAYKT 427
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+IE+ +G G+D +IGN +N GND+F G G D F+ S IY +
Sbjct: 428 IIENAIGGKGDDTLIGNPFDNNLIGGDGNDLFYGGDGNDLFY--GGSGNDVIYGEMGNDV 485
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+Y + D L D D + + S+ + G D
Sbjct: 486 LY--GDDGDDMLIDYYGANMLDGGKGNDRICVASMDRGLPGRNIIQGGEGDDEIYLGTGT 543
Query: 387 YEFGLSEGRDITFDSYLYLG 406
+ +G D F+ + Y G
Sbjct: 544 HRITGGQGNDT-FNFFCYEG 562
>gi|330969859|gb|EGH69925.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 535
Score = 189 bits (481), Expect = 9e-46, Method: Composition-based stats.
Identities = 102/480 (21%), Positives = 161/480 (33%), Gaps = 66/480 (13%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + ++ + + D L A+ AL WS V
Sbjct: 29 PFWLGDSSGTHLTYSFHKADSVYAT---DYSRSQEPGDAYSLTDAQAVAAKSALDAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFIS------SNNGYVCTPRY---DSRYFMEINFDKADVWRY 112
D+ F E DI+F + G P ++ N + AD
Sbjct: 86 ADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNVNAAD---- 141
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
KGT +HE GHALGL H + V D + + ++MSY
Sbjct: 142 -PAKGTDDYLTFMHETGHALGLKHSFEASQYNDVL---LDAKFEDARYTIMSYTNNYS-- 195
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
TPM+ D+ A+Q IYGA G+++YK +TI+D+GG D +
Sbjct: 196 -----FKPTTPMLLDVAAMQFIYGANTHYHTGDDVYKW---APGQSVFETIWDAGGKDTI 247
Query: 232 DLTLIGGVKNYIDLNTESWSSIG--------------GYEKNMTIAQHTVIESVVGSSGN 277
D + I+LN +S+IG + IA IE+ +GS+ N
Sbjct: 248 DASNQ-EASVKINLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGAHIENAIGSAFN 306
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD- 336
D +IGN +NV G D G G DT+ L + + + +
Sbjct: 307 DTLIGNDLDNVLNGRGGLDTMIGGLGNDTYVIDQAGELDLVQEKADQGVDTLKITYDNTS 366
Query: 337 -----------FLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L++ E + + + + L + L G D +
Sbjct: 367 PIAQVINLNAGTLANFENVHLKGEGAFTVLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQ 426
Query: 385 HFYEFGLSEGRD-ITFDSYLYLGSYD--DLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
G D F+ +G D+ F S +G + + DAF
Sbjct: 427 GADIMTGGSGADRFVFNDLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTKALDAFS 486
>gi|110597459|ref|ZP_01385746.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Chlorobium ferrooxidans DSM
13031]
gi|110341003|gb|EAT59474.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Chlorobium ferrooxidans DSM
13031]
Length = 549
Score = 189 bits (480), Expect = 1e-45, Method: Composition-based stats.
Identities = 97/353 (27%), Positives = 143/353 (40%), Gaps = 32/353 (9%)
Query: 46 ELNPNAQEVARWALGEWSKVVDLTFEETSIH----SDIKFIS-----SNNGYVCTPRYDS 96
L A W+ V +L+F + + D + + G+ P
Sbjct: 73 ALTATQIAAAGSVFQLWAAVANLSFTQVADTAGSVGDFRLAFSSAVSGSWGWCYYPDDYW 132
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
++ + A + ++ +HEIGH LGL HPG+Y G G D
Sbjct: 133 ASAADVWINPAYATGSSWTNSSFNYYSLIHEIGHGLGLKHPGNY-SGTSSSGPYLPANLD 191
Query: 157 SFLTSVMSYFMPQDSMMDASFGY---CATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQ 212
L SVMSY +DAS TPMV DI A+Q +YGA GNN Y +
Sbjct: 192 YRLYSVMSYNDWHKWYVDASQTIAVLPETPMVYDIAAIQYLYGANNSYQTGNNTYTFDP- 250
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI----------GGYEKNMTI 262
PF +TI+D+GG D +D++ +DL S+SS+ N+ I
Sbjct: 251 --AVPFYKTIWDAGGTDTIDISNFTTDC-TVDLRAGSYSSLHYVNRGNSSNYDGSNNLGI 307
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A +E+V G +G+D + GNSA N GND +G G DT + S Y I
Sbjct: 308 AFGVTLENVKGGTGSDTITGNSAANTITGGGGNDTINGGDGSDTAIFSGNSSDYTITYDA 367
Query: 323 NAIIVYD----ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
++ + A D LS VE +FAD + N+ ++ D+
Sbjct: 368 SSGVYTITDKRAGGEGSDHLSGVEHFQFADTTQINTNIPTVTLFSPNDGAVDV 420
>gi|296283662|ref|ZP_06861660.1| serralysin [Citromicrobium bathyomarinum JL354]
Length = 972
Score = 188 bits (476), Expect = 4e-45, Method: Composition-based stats.
Identities = 125/542 (23%), Positives = 204/542 (37%), Gaps = 47/542 (8%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P++T ++I+D L + + +V ++ ++T L Q +AR AL W+ V
Sbjct: 123 PIFTNDQISDQLTSGYW---GGSTRRWNVAPGGTITVNLTGLTTEGQFLAREALNLWTDV 179
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI---NFDKADVWRYGIGKGTILSH 122
+ F E + + I F + +G + +F N + YG T
Sbjct: 180 TGINFSEITTSAQITFDDNESGAFAGGSTSNGFFTGNSRVNVSTDWLTNYGTTLNTYSFQ 239
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP----QDSMMDASFG 178
+HEIGHALGL H G+YN G Y D Y+NDS+ T++MSYF P S ++
Sbjct: 240 TYIHEIGHALGLGHGGNYN-GSADYPADALYQNDSWNTTIMSYFSPGENTYFSQQGFTYQ 298
Query: 179 YCATPMVSDIVA-VQKIYGAPK-GSLGNNIYKIEVQQK--------DSPFIQTIYDSGGD 228
Y TPMV+DI++ +Y + G+ Y ++ I D GG
Sbjct: 299 YTITPMVADIISTNGGLYASYSGTRTGDTTYGFNNTSGRAVYDASVNANATVAIIDHGGI 358
Query: 229 DLLDLTLIGGV-KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D LD + I+LN E + + G N+ IA+ TVIE+ +G +G+D +IGN A+N
Sbjct: 359 DTLDYSFTNASYTQLINLNPEVFGNTRGRVGNLVIARGTVIENAIGGAGSDTLIGNIADN 418
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ ++GND DG G DT + Y I + + D LS +ERL F
Sbjct: 419 ILRGNAGNDTIDGGVGTDTAVFSGNRADYTITNLSGGRVQVSGPD-GTDTLSSIERLMF- 476
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ ++ G + + + FG S+ D Y
Sbjct: 477 --------------------NDMVLGRSGASFGNATQAYAGFGYSQSAGAWSDDTTYPRI 516
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
D+ +D + + G L Y + + D+
Sbjct: 517 AQDMNGDGRADLVGFGGDGVYVALSNGSGGFGNAFLAYNSFGASQTGGGWSSNDVYPRTI 576
Query: 468 DHFSNFGCEEGRFVTFD-SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
+ G + + F + +Y+ G A Y G + +
Sbjct: 577 ADVNGDGRVD--LIGFGSAGVYVALGQAPSGGQQLAFGDVALVYNGFGASDAAGGWTNDS 634
Query: 527 LE 528
Sbjct: 635 TY 636
>gi|218532711|ref|YP_002423527.1| heme peroxidase [Methylobacterium chloromethanicum CM4]
gi|218525014|gb|ACK85599.1| Animal heme peroxidase [Methylobacterium chloromethanicum CM4]
Length = 2342
Score = 187 bits (474), Expect = 5e-45, Method: Composition-based stats.
Identities = 84/352 (23%), Positives = 135/352 (38%), Gaps = 54/352 (15%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ +G + NN F ++ ND F+G SG D + + V + D
Sbjct: 2005 AIFVGGAENNTFTGTARNDSFNGGSGTDRAILNFAFGAALVSVAADGATVITGPD-GSDT 2063
Query: 338 LSDVERLRFADQCID--SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+E +F+D+ ID + + + + I D H+ E+G EGR
Sbjct: 2064 FRGIEVYQFSDRTIDNADGSPLVDDLFYLSRYGDVAAAGIDADT-----HYAEYGFREGR 2118
Query: 396 DIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDL 452
D F + YL + D+R HY +G +EGR+P F Y A++ D+
Sbjct: 2119 DPNAFFSTTGYLAANSDVRGA----GINPLTHYDQYGFREGRDPGVNFDNEAYYAANPDV 2174
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFV--------------TFDSYLYLGSYDDL--- 495
A + H+ +G EGR FD+ YL D+
Sbjct: 2175 QAAGLNP-------LRHYLEYGQGEGRSADEAVGRVADLSAAQGFDAEFYLLGNLDVAEA 2227
Query: 496 -RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDH 553
G A HY +G+ EGR+P+A F Y+ ++ D+ A P H
Sbjct: 2228 AIAAGGDSFAFALNHYSRYGIAEGRDPNALFDTDGYLDAYADVQAA-GINPLT------H 2280
Query: 554 FSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+ +G EGR + F+ YL++ D+ HY+ +G+ EGR
Sbjct: 2281 YIQYGAREGRDPSIEFDTTAYLSANQDVQAA----GLNPMLHYLQYGLYEGR 2328
Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats.
Identities = 95/625 (15%), Positives = 164/625 (26%), Gaps = 92/625 (14%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYD-SRYFMEINFDKADVWRYGIGKGTILSHNA 124
+ T + ++ +N + S +D G G TI
Sbjct: 1683 ANYTVVAGTAGNNAGLNGANGAAGSQAVFGLSGNDTLNGGAASDHLVGGQGNDTIRGDAG 1742
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
I G S T + ++ +
Sbjct: 1743 GDTIYWTAG------DGRDLVNGDTTPTNIAGSVDTMKIIGDTSSETFRIYTRAAALEAG 1796
Query: 185 VSDIVAVQKI----YGAPKGSL-----------------GNNIYKIEVQQKDSPFIQTIY 223
++D+ A +I G S+ G+ + S TI
Sbjct: 1797 IADLNANTEIVITRNGTGSASIVAELDNIEEIVINGRGGGDIFMPVGDFTGTSLLTNTIT 1856
Query: 224 --DSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTI----AQHTVIESVVGSSG 276
S GDD +D+T + + + + +G I + + +
Sbjct: 1857 LEGSEGDDTVDITALSSAHRVVFRSNGGNDTLVGTLRPQDMIELPDGATSAEYEIRTDAT 1916
Query: 277 NDVVIGNSANNVF---FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ V N+ G D Y + + Y +
Sbjct: 1917 SGVTTMTRGNDSICFTSPGGLPHFGSGRKHDDDDDPIEADYEDDHHGDHDDEDDYGPEDG 1976
Query: 334 KQDFLSDVERLR--FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D ++ L D +I A D F L
Sbjct: 1977 PHDPVTGQPPLNPPGTDGPGTGQPSPVGAIFVGGAENNTFTGTARNDSFNGGSGTDRAIL 2036
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR-----HYITHGVKEGRNPDAFKALEYI 446
+ F + L + D + G D R + + L Y+
Sbjct: 2037 N----FAFGAALVSVAADGATVITGPDGSDTFRGIEVYQFSDRTIDNADGSPLVDDLFYL 2092
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRG 504
+ + D+ A D H++ +G EGR F + YL + D+R +
Sbjct: 2093 SRYGDVAAAGID-------ADTHYAEYGFREGRDPNAFFSTTGYLAANSDVRGAGIN--- 2142
Query: 505 AAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
HY +G +EGR+P F Y A++ D+ A H+ +G EGR
Sbjct: 2143 -PLTHYDQYGFREGRDPGVNFDNEAYYAANPDVQAA-------GLNPLRHYLEYGQGEGR 2194
Query: 564 SIT--------------FNPDLYLTSYDDL----WNVFGSDRSAAAQHYITHGMKEGRAL 605
S F+ + YL D+ G + A HY +G+ EGR
Sbjct: 2195 SADEAVGRVADLSAAQGFDAEFYLLGNLDVAEAAIAAGGDSFAFALNHYSRYGIAEGR-- 2252
Query: 606 GISGMQFKSVMNLSEKSRDKADLSL 630
+ D +
Sbjct: 2253 --DPNALFDTDGYLDAYADVQAAGI 2275
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/289 (15%), Positives = 84/289 (29%), Gaps = 32/289 (11%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
T G + + +++ G++GND++ G N+ +G+D DG +G D
Sbjct: 1582 GTPGDDIADGTSGFFGLGAN---DTLNGNAGNDILNGAGGNDTLNGGAGDDRLDGGTGTD 1638
Query: 306 TFFYYAPSYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSV---------- 354
+ P + + ++V D D LS +E LRFA V
Sbjct: 1639 VAVFAGPVGNFALGSSGTNLVVTDLTGAEGTDTLSTIETLRFAGANYTVVAGTAGNNAGL 1698
Query: 355 -------------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL--SEGRDI-- 397
+ L A+ + L+ G D +GRD+
Sbjct: 1699 NGANGAAGSQAVFGLSGNDTLNGGAASDHLVGGQGNDTIRGDAGGDTIYWTAGDGRDLVN 1758
Query: 398 -TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
GS D ++ + + + ++ G I + +
Sbjct: 1759 GDTTPTNIAGSVDTMKIIGDTSSETFRIYTRAAALEAGIADLNANTEIVITRNGTGSASI 1818
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
D ++ + G F L + L G D
Sbjct: 1819 VAELDNIEEIVINGRGGGDIFMPVGDFTGTSLLTNTITLEGSEGDDTVD 1867
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 74/617 (11%), Positives = 146/617 (23%), Gaps = 91/617 (14%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA-- 131
+D G T ++ + D G G + A
Sbjct: 1586 DDIADGTSGFFGLGANDTLNGNAGNDILNGAGGNDTLNGGAGDDRLDGGTGTDVAVFAGP 1645
Query: 132 ---LGLMHPGSYNGGYPVYGVDNDYENDSFL--------TSVMSYFMPQDSMMDASFGYC 180
L G+ + G + + +V++ ++ ++ + G
Sbjct: 1646 VGNFALGSSGTNLVVTDLTGAEGTDTLSTIETLRFAGANYTVVAGTAGNNAGLNGANGAA 1705
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ V + + G TI G D + T G
Sbjct: 1706 GSQAVFGLSGNDTLNGGAAS----------DHLVGGQGNDTIRGDAGGDTIYWT--AGDG 1753
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ + ++I G M I T E+ + + A+ ++ +
Sbjct: 1754 RDLVNGDTTPTNIAGSVDTMKIIGDTSSETFRIYTRAAALEAGIAD--LNANTEIVITRN 1811
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVY--DANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+G + + + ++ + L++ L ++
Sbjct: 1812 GTGSASIVAELDNIEEIVINGRGGGDIFMPVGDFTGTSLLTNTITLEGSEGDDTVDITAL 1871
Query: 359 RSI----LEYTASYEDLIQ-------------------VIGQDVFES----MKHFYEFGL 391
S + L+ I D +
Sbjct: 1872 SSAHRVVFRSNGGNDTLVGTLRPQDMIELPDGATSAEYEIRTDATSGVTTMTRGNDSICF 1931
Query: 392 -SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
S G F S DD D E D +
Sbjct: 1932 TSPGGLPHFGSGRKHDDDDDPIEADYEDDHHGDHDDEDDYGPEDGPHDPVTGQPPLNPPG 1991
Query: 451 DLINAFADAPD-------------LVQVGKDHFSNFGCEEGRFV---TFDSYLYLGSYDD 494
++ N G R + F + L + D
Sbjct: 1992 TDGPGTGQPSPVGAIFVGGAENNTFTGTARNDSFNGGSGTDRAILNFAFGAALVSVAADG 2051
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA-----FKALEYIASHEDLINAFADAPDLVQA 549
+ G D R + + +A L Y++ + D+ A D
Sbjct: 2052 ATVITGPDGSDTFRGIEVYQFSDRTIDNADGSPLVDDLFYLSRYGDVAAA-GIDADT--- 2107
Query: 550 GKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
H++ +G+ EGR F+ YL + D+ HY +G +EGR G+
Sbjct: 2108 ---HYAEYGFREGRDPNAFFSTTGYLAANSDVRGA----GINPLTHYDQYGFREGRDPGV 2160
Query: 608 SGMQFKSVMNLSEKSRD 624
+ +
Sbjct: 2161 NFDNEAYYAANPDVQAA 2177
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 17/144 (11%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVI---GQDVFESMKHFYEFGLSEGRDIT--FDSYLY 404
S + + + I G ++ H+ +G++EGRD FD+ Y
Sbjct: 2204 ADLSAAQGFDAEFYLLGNLDVAEAAIAAGGDSFAFALNHYSRYGIAEGRDPNALFDTDGY 2263
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLV 463
L +Y D++ HYI +G +EGR+P F Y+++++D+ A +
Sbjct: 2264 LDAYADVQAA----GINPLTHYIQYGAREGRDPSIEFDTTAYLSANQDVQAAGLNPML-- 2317
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYL 487
H+ +G EGR D+
Sbjct: 2318 -----HYLQYGLYEGRLPQSDASF 2336
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 47/164 (28%), Gaps = 7/164 (4%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI + +V G+D + G + ++ G D G +G D +
Sbjct: 949 FTIGGTEGNDIIVSGGGDDAIWGKAGDDRIEAGYGVDKVFGGAGDDIITNAGTDIGEADF 1008
Query: 320 RFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
N L + + ++ + + + L+ G
Sbjct: 1009 LHGNEGNDVIHGGSGLSLLFGNQGNDFIVTGPDGKEAFAGTGDDFVLGGSGGDVLLGNEG 1068
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
D E + F E ++ F+S + D+ N D
Sbjct: 1069 DDWLEGGQRFDSL-SGENSELFFNSTII---GHDVLNGGSGDTD 1108
Score = 42.5 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 66/224 (29%), Gaps = 17/224 (7%)
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
DAN D LS++E+LRF+D +V + ++ +
Sbjct: 1423 DANSDGIDRLSNIEKLRFSDGNGGTVEYFLNQLPFPATGAPVIVDPTPTN---------- 1472
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
GR + +++V G + +G R+
Sbjct: 1473 -----GRVSPTEGLPLTVDTSAIQDVNGLGTFSYQWQASANGGTTWRDLQVSANGNTFTP 1527
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
++ ++ + ++++V G +E F +G D V +
Sbjct: 1528 NDGVLGVGSQVGEILRVRVSFTDGAGHQEVLFSA--PTGIVGENWDAIPVVANTFNGTPG 1585
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
I G A L A ++ L A + AG D
Sbjct: 1586 DDIADGTSGFFGLGANDTLNGNAGNDILNGAGGNDTLNGGAGDD 1629
Score = 38.6 bits (88), Expect = 3.4, Method: Composition-based stats.
Identities = 27/205 (13%), Positives = 50/205 (24%), Gaps = 35/205 (17%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G N++ G+D G +G D A + K++ I+ +A
Sbjct: 950 TIGGTEGNDIIVSGGGDDAIWGKAGDDRI--EAGYGVDKVFGGAGDDIITNAGTD----- 1002
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ L G DV ++G D
Sbjct: 1003 --------------------------IGEADFLHGNEGNDVIHGGSGLSLLFGNQGNDFI 1036
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
++ + F G F +L + +L
Sbjct: 1037 VTGPDGKEAFAGTGDDFVLGGSGGDVLLGNEGDDWLEGGQRFDSLSG--ENSELFFNSTI 1094
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTF 483
V G +++ E G + F
Sbjct: 1095 IGHDVLNGGSGDTDYDGESGDDIMF 1119
Score = 37.1 bits (84), Expect = 9.1, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 20/183 (10%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
G+ V G +D + D + + T +DI ++G
Sbjct: 952 GGTEGNDIIVSGGGDDAIWGKAGDDRIEAGYGVDKVFGGAGDDIITNAGTDIGEADFLHG 1011
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWS 251
+ GN++ + ++ + G+D + G + L
Sbjct: 1012 ----NEGNDV------IHGGSGLSLLFGNQGNDFIVTGPDGKEAFAGTGDDFVLGGSGGD 1061
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS---ANNVFFESSGNDVFDGSSGLDTFF 308
+ G E + + +S+ G N + NS ++V SG+ +DG SG D F
Sbjct: 1062 VLLGNEGDDWLEGGQRFDSLSGE--NSELFFNSTIIGHDVLNGGSGDTDYDGESGDDIMF 1119
Query: 309 YYA 311
+
Sbjct: 1120 QNS 1122
>gi|296532745|ref|ZP_06895427.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296266938|gb|EFH12881.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 371
Score = 186 bits (473), Expect = 8e-45, Method: Composition-based stats.
Identities = 113/371 (30%), Positives = 169/371 (45%), Gaps = 21/371 (5%)
Query: 253 IGGYEKNMTIAQHT-VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
IG + IA +S+ G +G+D + ++ GND +G G DT
Sbjct: 5 IGTPGNDRLIAPDARENDSIAGDAGDDFIEARGGDDRITPGPGNDRVEGGDGRDTVIVSG 64
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA--DQCIDSVNVKQRSILEYTASYE 369
++YR+ N ++ D L DVE ++F ++ + Y ASY
Sbjct: 65 DISQTEVYRYNNEGVL--RGPDGVDTLLDVEAVQFTGVGGTLEMSDANSFLSYSYIASYG 122
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG-AAARHYIT 428
DL + G D +HF +FG EGR+ITF+ YL + D+ + G++ + ARHY+
Sbjct: 123 DLTEAYGADAGAGWRHFRDFGAVEGREITFNGNAYLAANTDVLSALGANADESGARHYLE 182
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+G EGR F AL Y AS+ +LI++F HF G EGR ++F+ Y
Sbjct: 183 YGRFEGRT-TEFAALSYTASYGELIDSFGTD---TIAATAHFVQEGFNEGRGISFNGLEY 238
Query: 489 LGSYDDLRNVFGSDR------GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
+ SY DL + +G A HYI +G EGR F L+Y+AS+ D+I AF D
Sbjct: 239 VASYGDLIDAYGDAERPFDLGEDGAGHYIQYGRGEGRETT-FDGLQYMASYGDVIEAFRD 297
Query: 543 APDLVQA---GKDHFSNFGYEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ D G H+ G+ E R FN Y + DL + A A H+I +G
Sbjct: 298 STDAGAYDTIGALHYIRDGFGEERVADRFNEQSYAAANGDLAEAGITSADALALHWIQYG 357
Query: 599 MKEGRALGISG 609
++GRA
Sbjct: 358 YEKGRAGAYDP 368
Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats.
Identities = 80/315 (25%), Positives = 130/315 (41%), Gaps = 25/315 (7%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF------DSYLYLGSYDDLR 412
+ A + + G D +GRD + +Y + + +
Sbjct: 21 NDSIAGDAGDDFIEARGGDDRITPGPGNDRVEGGDGRDTVIVSGDISQTEVYRYNNEGVL 80
Query: 413 NVFGSDRGA----AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
A + G E + ++F + YIAS+ DL A+ G
Sbjct: 81 RGPDGVDTLLDVEAVQFTGVGGTLEMSDANSFLSYSYIASYGDLTEAYGADA---GAGWR 137
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDAFKAL 527
HF +FG EGR +TF+ YL + D+ + G++ + ARHY+ +G EGR F AL
Sbjct: 138 HFRDFGAVEGREITFNGNAYLAANTDVLSALGANADESGARHYLEYGRFEGRT-TEFAAL 196
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD- 586
Y AS+ +LI++F A HF G+ EGR I+FN Y+ SY DL + +G
Sbjct: 197 SYTASYGELIDSFGTDTI---AATAHFVQEGFNEGRGISFNGLEYVASYGDLIDAYGDAE 253
Query: 587 -----RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYT 641
A HYI +G EGR G+Q+ + ++ + + ++D L+
Sbjct: 254 RPFDLGEDGAGHYIQYGRGEGRETTFDGLQYMASYGDVIEAFRDSTDAGAYDT-IGALHY 312
Query: 642 DYFGDGNYYDSDLYS 656
G G +D ++
Sbjct: 313 IRDGFGEERVADRFN 327
>gi|218528172|ref|YP_002418988.1| heme peroxidase [Methylobacterium chloromethanicum CM4]
gi|218520475|gb|ACK81060.1| Animal heme peroxidase [Methylobacterium chloromethanicum CM4]
Length = 2342
Score = 186 bits (472), Expect = 9e-45, Method: Composition-based stats.
Identities = 83/352 (23%), Positives = 134/352 (38%), Gaps = 54/352 (15%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ +G + NN F ++ ND F+G G D + + V + D
Sbjct: 2005 AIFVGGAENNTFTGTARNDSFNGGGGTDRAILNFAFGAALVTVAADGATVITGPD-GSDT 2063
Query: 338 LSDVERLRFADQCID--SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+E +F+D+ ID + + + + I D H+ E+G EGR
Sbjct: 2064 FRGIEAYQFSDRTIDNADGSPLVDDLFYLSRYGDVAAAGIDADT-----HYAEYGFREGR 2118
Query: 396 DIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDL 452
D F + YL + D+R HY +G +EGR+P F Y A++ D+
Sbjct: 2119 DPNAFFSTTGYLAANSDVRGA----GINPLTHYDQYGFREGRDPGVNFDNEAYYAANPDV 2174
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFV--------------TFDSYLYLGSYDDL--- 495
A + H+ +G EGR FD+ YL D+
Sbjct: 2175 QAAGLNP-------LRHYLEYGQGEGRSADEAVGRVADLGAAQGFDAEFYLLGNLDVAEA 2227
Query: 496 -RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDH 553
G A HY +G+ EGR+P+A F Y+ ++ D+ A P H
Sbjct: 2228 AIAAGGDSFAFALNHYSRYGIAEGRDPNALFDTDGYLDAYADVQAA-GINPLT------H 2280
Query: 554 FSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+ +G EGR + F+ YL++ D+ HY+ +G+ EGR
Sbjct: 2281 YIQYGAREGRDPSIEFDTTAYLSANQDVQAA----GLNPMLHYLQYGLYEGR 2328
Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats.
Identities = 95/625 (15%), Positives = 164/625 (26%), Gaps = 92/625 (14%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYD-SRYFMEINFDKADVWRYGIGKGTILSHNA 124
+ T + ++ +N + S +D G G TI
Sbjct: 1683 ANYTVVAGTAGNNAGLNGANGAAGSQAVFGLSGNDTLNGGAASDHLVGGQGNDTIRGDAG 1742
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
I G S T + ++ +
Sbjct: 1743 GDTIYWTAG------DGRDLVNGDTTPTNIAGSVDTMKIIGDTSSETFRIYTRAAALEAG 1796
Query: 185 VSDIVAVQKI----YGAPKGSL-----------------GNNIYKIEVQQKDSPFIQTIY 223
++D+ A +I G S+ G+ + S TI
Sbjct: 1797 IADLNANTEIVITRNGTGSASIVAELDNIEEIVINGRGGGDIFMPVGDFTGTSLLTNTIT 1856
Query: 224 --DSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTI----AQHTVIESVVGSSG 276
S GDD +D+T + + + + +G I + + +
Sbjct: 1857 LEGSEGDDTVDITALSSAHRVVFRSNGGNDTLVGTLRPQDMIELPDGATSAEYEIRTDAT 1916
Query: 277 NDVVIGNSANNVF---FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ V N+ G D Y + + Y +
Sbjct: 1917 SGVTTMTRGNDSICFTSPGGLPHFGSGRKHDDDDDPIEADYEDDHHGDHDDEDDYGPEDS 1976
Query: 334 KQDFLSDVERLR--FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D ++ L D +I A D F L
Sbjct: 1977 PHDPVTGQPPLNPPGTDGPGTGQPSPVGAIFVGGAENNTFTGTARNDSFNGGGGTDRAIL 2036
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR-----HYITHGVKEGRNPDAFKALEYI 446
+ F + L + D + G D R + + L Y+
Sbjct: 2037 N----FAFGAALVTVAADGATVITGPDGSDTFRGIEAYQFSDRTIDNADGSPLVDDLFYL 2092
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRG 504
+ + D+ A D H++ +G EGR F + YL + D+R +
Sbjct: 2093 SRYGDVAAAGID-------ADTHYAEYGFREGRDPNAFFSTTGYLAANSDVRGAGIN--- 2142
Query: 505 AAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
HY +G +EGR+P F Y A++ D+ A H+ +G EGR
Sbjct: 2143 -PLTHYDQYGFREGRDPGVNFDNEAYYAANPDVQAA-------GLNPLRHYLEYGQGEGR 2194
Query: 564 SIT--------------FNPDLYLTSYDDL----WNVFGSDRSAAAQHYITHGMKEGRAL 605
S F+ + YL D+ G + A HY +G+ EGR
Sbjct: 2195 SADEAVGRVADLGAAQGFDAEFYLLGNLDVAEAAIAAGGDSFAFALNHYSRYGIAEGR-- 2252
Query: 606 GISGMQFKSVMNLSEKSRDKADLSL 630
+ D +
Sbjct: 2253 --DPNALFDTDGYLDAYADVQAAGI 2275
Score = 85.2 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 46/289 (15%), Positives = 84/289 (29%), Gaps = 32/289 (11%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
T G + + +++ G++GND++ G N+ +G+D DG +G D
Sbjct: 1582 GTPGDDIADGTSGFFGLGAN---DTLNGNAGNDILNGAGGNDTLNGGAGDDRLDGGTGTD 1638
Query: 306 TFFYYAPSYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSV---------- 354
+ P + + ++V D D LS +E LRFA V
Sbjct: 1639 VAVFAGPVGNFALGSSGTNLVVTDLTGAEGTDTLSTIETLRFAGANYTVVAGTAGNNAGL 1698
Query: 355 -------------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL--SEGRDI-- 397
+ L A+ + L+ G D +GRD+
Sbjct: 1699 NGANGAAGSQAVFGLSGNDTLNGGAASDHLVGGQGNDTIRGDAGGDTIYWTAGDGRDLVN 1758
Query: 398 -TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
GS D ++ + + + ++ G I + +
Sbjct: 1759 GDTTPTNIAGSVDTMKIIGDTSSETFRIYTRAAALEAGIADLNANTEIVITRNGTGSASI 1818
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
D ++ + G F L + L G D
Sbjct: 1819 VAELDNIEEIVINGRGGGDIFMPVGDFTGTSLLTNTITLEGSEGDDTVD 1867
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 73/612 (11%), Positives = 150/612 (24%), Gaps = 81/612 (13%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA-- 131
+D G T ++ + D G G + A
Sbjct: 1586 DDIADGTSGFFGLGANDTLNGNAGNDILNGAGGNDTLNGGAGDDRLDGGTGTDVAVFAGP 1645
Query: 132 ---LGLMHPGSYNGGYPVYGVDNDYENDSFL--------TSVMSYFMPQDSMMDASFGYC 180
L G+ + G + + +V++ ++ ++ + G
Sbjct: 1646 VGNFALGSSGTNLVVTDLTGAEGTDTLSTIETLRFAGANYTVVAGTAGNNAGLNGANGAA 1705
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ V + + G TI G D + T G
Sbjct: 1706 GSQAVFGLSGNDTLNGGAAS----------DHLVGGQGNDTIRGDAGGDTIYWT--AGDG 1753
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ + ++I G M I T E+ + + A+ ++ +
Sbjct: 1754 RDLVNGDTTPTNIAGSVDTMKIIGDTSSETFRIYTRAAALEAGIAD--LNANTEIVITRN 1811
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVY--DANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+G + + + ++ + L++ L ++
Sbjct: 1812 GTGSASIVAELDNIEEIVINGRGGGDIFMPVGDFTGTSLLTNTITLEGSEGDDTVDITAL 1871
Query: 359 RSI----LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD---- 410
S + L+ + + E R + +D
Sbjct: 1872 SSAHRVVFRSNGGNDTLVGTLRPQDMIELPDGATSAEYEIRTDATSGVTTMTRGNDSICF 1931
Query: 411 -----LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
L + + I ++ + D +Y P
Sbjct: 1932 TSPGGLPHFGSGRKHDDDDDPIEADYEDDHHGDHDDEDDYGPEDSPHDPVTGQPPLNPPG 1991
Query: 466 GKDHFSNFGCEEGRFVTF-----DSYLYLGSYDDLRNVFGS--------DRGAAARHYIT 512
G F ++ + +D N G GAA
Sbjct: 1992 --TDGPGTGQPSPVGAIFVGGAENNTFTGTARNDSFNGGGGTDRAILNFAFGAALVTVAA 2049
Query: 513 HGVKEGRNPDAFKALEYIASHE---------------DLINAFADAPDLVQAGKD---HF 554
G PD I +++ D + + D+ AG D H+
Sbjct: 2050 DGATVITGPDGSDTFRGIEAYQFSDRTIDNADGSPLVDDLFYLSRYGDVAAAGIDADTHY 2109
Query: 555 SNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQF 612
+ +G+ EGR F+ YL + D+ HY +G +EGR G++
Sbjct: 2110 AEYGFREGRDPNAFFSTTGYLAANSDVRGA----GINPLTHYDQYGFREGRDPGVNFDNE 2165
Query: 613 KSVMNLSEKSRD 624
+
Sbjct: 2166 AYYAANPDVQAA 2177
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 354 VNVKQRSILEYTASYEDLIQVI---GQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSY 408
+ + + I G ++ H+ +G++EGRD FD+ YL +Y
Sbjct: 2208 AAQGFDAEFYLLGNLDVAEAAIAAGGDSFAFALNHYSRYGIAEGRDPNALFDTDGYLDAY 2267
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGK 467
D++ HYI +G +EGR+P F Y+++++D+ A +
Sbjct: 2268 ADVQAA----GINPLTHYIQYGAREGRDPSIEFDTTAYLSANQDVQAAGLNPML------ 2317
Query: 468 DHFSNFGCEEGRFVTFDSYL 487
H+ +G EGR D+
Sbjct: 2318 -HYLQYGLYEGRLPQSDASF 2336
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 47/164 (28%), Gaps = 7/164 (4%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI + +V G+D + G + ++ G D G +G D +
Sbjct: 949 FTIGGTEGNDIIVSGGGDDAIWGKAGDDRIEAGYGVDKVFGGAGDDIITNAGTDIGEADF 1008
Query: 320 RFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
N L + + ++ + + + L+ G
Sbjct: 1009 LHGNEGNDVIHGGSGLSLLFGNQGNDFIVTGPDGKEAFAGTGDDFVLGGSGGDVLLGNEG 1068
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
D E + F E ++ F+S + D+ N D
Sbjct: 1069 DDWLEGGQRFDSL-SGENSELFFNSTII---GHDVLNGGSGDTD 1108
Score = 42.5 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 66/224 (29%), Gaps = 17/224 (7%)
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
DAN D LS++E+LRF+D +V + ++ +
Sbjct: 1423 DANSDGIDRLSNIEKLRFSDGNGGTVEYFLNQLPFPATGAPVIVDPTPTN---------- 1472
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
GR + +++V G + +G R+
Sbjct: 1473 -----GRVSPTEGLPLTVDTSAIQDVNGLGTFSYQWQASANGGTTWRDLQVSANGNTFTP 1527
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
++ ++ + ++++V G +E F +G D V +
Sbjct: 1528 NDGVLGVGSQVGEILRVRVSFTDGAGHQEVLFSA--PTGIVGENWDAIPVVANTFNGTPG 1585
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
I G A L A ++ L A + AG D
Sbjct: 1586 DDIADGTSGFFGLGANDTLNGNAGNDILNGAGGNDTLNGGAGDD 1629
Score = 38.2 bits (87), Expect = 4.2, Method: Composition-based stats.
Identities = 27/205 (13%), Positives = 50/205 (24%), Gaps = 35/205 (17%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G N++ G+D G +G D A + K++ I+ +A
Sbjct: 950 TIGGTEGNDIIVSGGGDDAIWGKAGDDRI--EAGYGVDKVFGGAGDDIITNAGTD----- 1002
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ L G DV ++G D
Sbjct: 1003 --------------------------IGEADFLHGNEGNDVIHGGSGLSLLFGNQGNDFI 1036
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
++ + F G F +L + +L
Sbjct: 1037 VTGPDGKEAFAGTGDDFVLGGSGGDVLLGNEGDDWLEGGQRFDSLSG--ENSELFFNSTI 1094
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTF 483
V G +++ E G + F
Sbjct: 1095 IGHDVLNGGSGDTDYDGESGDDIMF 1119
>gi|237801271|ref|ZP_04589732.1| metalloprotease [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331024130|gb|EGI04187.1| metalloprotease [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 535
Score = 186 bits (472), Expect = 1e-44, Method: Composition-based stats.
Identities = 106/468 (22%), Positives = 157/468 (33%), Gaps = 69/468 (14%)
Query: 9 TTERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQEVAR 56
+ + LL YW + + Y + + D L + AR
Sbjct: 17 SDDDRITSLLWGPYWLKGPNGNNLTYSFHTADSVYSTDYSRSQEPSDAYSLTTAQMDAAR 76
Query: 57 WALGEWSKVVDLTFEETSIH----SDIKFIS------SNNGYVCTPRYDSRYFMEINFDK 106
ALG WS V D+ F E DI+F + G P ++
Sbjct: 77 SALGAWSAVADIKFTEVQDTPDNVGDIRFGGFKGLKGTELGQAYAPGTL-GRSGDVWI-G 134
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
DV GKGT +HE GHALGL H V D + + ++MSY
Sbjct: 135 PDVDAAVPGKGTPDYLTFMHETGHALGLKHSFEETQYNDVL---LDAKFEDARYTIMSYT 191
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDS 225
TPM+ D+ A+Q IYGA N++YK Q +TI+D+
Sbjct: 192 NKYS-------FKPTTPMLLDVAAMQFIYGANTHYHTENDVYKWAPDQS---VFETIWDA 241
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIG--------------GYEKNMTIAQHTVIESV 271
GG D +D + I+LN +S+IG + IA T IE+
Sbjct: 242 GGKDTIDASNQAAFVK-INLNEGEFSTIGKAFLDYNHTPDNPTQMNSGLAIAYGTHIENA 300
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+GS+ +D +IGN NV G D G G DT+ L + N I
Sbjct: 301 IGSAFDDTLIGNELANVLDGRGGLDTMIGGLGNDTYVVDQVGELALVQEKANEGIDTLKI 360
Query: 332 EH------------KQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ L++ E + + + + L + L+ G D
Sbjct: 361 TYNNTSDKAAVIDLNTGTLANFENVHLKGEGDFTVLGNDRNNTLTGNDANNILVGGGGND 420
Query: 379 VFESMKHFYEFGLSEGRD-ITFDSYLYLGS--YDDLRNVFGSDRGAAA 423
+ G D F+ G D+ F S +G
Sbjct: 421 KLIGGQGADILTGGSGADHFVFNDLSETGKGLNSDVITDFNSQQGDKL 468
>gi|197284190|ref|YP_002150062.1| metalloprotease [Proteus mirabilis HI4320]
gi|194681677|emb|CAR40763.1| putative metalloprotease [Proteus mirabilis HI4320]
Length = 654
Score = 185 bits (470), Expect = 2e-44, Method: Composition-based stats.
Identities = 98/441 (22%), Positives = 149/441 (33%), Gaps = 97/441 (21%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISS-----------------NNGYVCT 91
P+ QEV L S DLTF I + N G+
Sbjct: 137 PHQQEVITEILQLASDFADLTFTRVPIQKNANLKFGYFNHFYKDSTTFFMTRGNGGFAQY 196
Query: 92 PRYDS------------------------------------RYFMEINFDKADVWRYGIG 115
P Y+ ++E + D++ Y
Sbjct: 197 PNYNGTPIKEIGPNEDYDIPGTIFINLATHEFYKWENGDNIDKYIENEANPGDLYNYHDN 256
Query: 116 K----------------------GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
G+ +HE+GHALGLMH Y +
Sbjct: 257 NQVAIIKSTDVLLNETMKSKHKLGSYEYLCFIHELGHALGLMHINVYLKNIKNDVIL--- 313
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
++ SVM+Y D + Y T M+ DI+ +Q +YG L NN Y
Sbjct: 314 ---TYKYSVMAYQFADIKDADFAGLYPMTFMLVDILLLQYLYGPNMTTRLENNTYGFHSN 370
Query: 213 QKDSPF---------IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + I+D+GG D LD +L + I+LN +S IGG N++IA
Sbjct: 371 TGRAAYSLNSIEDKLVSCIWDAGGIDTLDFSLYTVNQ-VINLNEGCFSDIGGLRSNISIA 429
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T+IE+ +G G+D +IGN +N GND+F G G D F+ S IY
Sbjct: 430 YKTIIENAIGGKGDDTLIGNPFDNNLIGGDGNDLFYGGDGNDLFY--GGSGNDVIYGELG 487
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
++Y + D L D D + + S ++ G D
Sbjct: 488 NDVLY--GDDGDDMLIDYYGANMLDGGKGNDRICVASTDRGLPGRNIILGGEGDDEIYLG 545
Query: 384 KHFYEFGLSEGRDITFDSYLY 404
+ +G D F+ + Y
Sbjct: 546 TGTHRITGGQGNDT-FNFFCY 565
>gi|146309556|ref|YP_001190021.1| serralysin [Pseudomonas mendocina ymp]
gi|145577757|gb|ABP87289.1| Serralysin [Pseudomonas mendocina ymp]
Length = 1134
Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats.
Identities = 115/549 (20%), Positives = 175/549 (31%), Gaps = 54/549 (9%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIK-----------FISSNNGYVCTP 92
I L+ N + R AL +WS V +L+F E S + + P
Sbjct: 72 IYSLSSNQESAVRSALAQWSSVANLSFTEVSDTAGGTVGDLRFGGYKLIDWDTAAFAFLP 131
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ G+ LHEIGHALGL HP +G
Sbjct: 132 GASP-LAGDVWI-GPVTNEVNPSGGSYDYLTFLHEIGHALGLKHPFEASGSSNYVLRGA- 188
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEV 211
D +VMSY D PM+ DI A+Q IYG+ G+N+Y +
Sbjct: 189 --YDDVRYTVMSYNDTYD-------FLPTGPMLYDIAAMQYIYGSNDTWQTGDNVYSWDA 239
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG----------GYEKNMT 261
+ +TI+D+GG+D +D + I+LN+ +SSIG G +T
Sbjct: 240 N---ARIFETIWDAGGNDTIDASNQSAGV-VINLNSGEFSSIGQSIYNYATGAGRNNFLT 295
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY----- 316
IA +VIE+ +GS D +IGNSA+NV G DV G +G DT++ P+
Sbjct: 296 IAYGSVIENAIGSDYKDTLIGNSADNVLDGGKGEDVLRGGAGNDTYYVDLPTGSDFYDRV 355
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
Y E V F ++ S L S +I G
Sbjct: 356 TEYAGEGYDKVVLRGTSTGFFGRSFALANNVEEVDASQTGAVALTLLGNNSANRIIGNAG 415
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR- 435
++ G D +L + + + A A T+ + +
Sbjct: 416 NNLLNGGAGADTMIGGAGNDTYVVDHLGDEVIEQVGEGIDLVQVAIATAGGTYTLGDHVE 475
Query: 436 ----NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
L L+ A+ G D + + V + S
Sbjct: 476 NATLTNSVSFNLVGNTLSNTLVGNAANNLLDGGAGADVMNGGAGNDTYVVDDIGDQIIDS 535
Query: 492 YDD--LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED---LINAFADAPDL 546
+ G + G E N I ++ L
Sbjct: 536 AGIDTVLASISYTLGNDLENLSLLG-SEALNGTGNGLANVITGNDGSNVLDGGGGVDTLR 594
Query: 547 VQAGKDHFS 555
G D +
Sbjct: 595 GGKGDDTYI 603
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 68/495 (13%), Positives = 139/495 (28%), Gaps = 37/495 (7%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
E ++ + + F N T ++ + ADV G G T + + +I
Sbjct: 473 HVENATLTNSVSFNLVGNTLSNTLVGNAANNLLDGGAGADVMNGGAGNDTYVVDDIGDQI 532
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
+ G + + + L + + + + G + ++
Sbjct: 533 -----IDSAGIDTVLASISYTLGNDLENLSLLGSEALNGTGNGLANVITGNDGSNVLDGG 587
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD-SGGDDLLDLTLIGGVKNYIDLNT 247
V + G G++ Y +++ +++ + + G+D + L +
Sbjct: 588 GGVDTLRGGK----GDDTYIVDLTARNTLEDSVLENLYEGNDTIQLRGGNVALATV---- 639
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + E A T ++ G+ N+++IGN+A+N+ +G D G G DT+
Sbjct: 640 TAIALANNVENLDASATGTTRLNLTGNVLNNILIGNAADNLLNGGAGADRLIGGDGNDTY 699
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI----DSVNVKQRSILE 363
E +V A + E + A + + L
Sbjct: 700 VVDNLGDEVIEQAGEGTDLVQVAIATAGGTYTLGEHVENATLTNKVAFNLTGNALSNTLV 759
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
A+ L +G DV + + + D DS D +R G
Sbjct: 760 GNAANNVLDGGLGADVMNGGAGNDTYIVDDVGDTIIDSAGI----DTVRASIAYTLGKGL 815
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE---EGRF 480
+ + G + +A+ D A G D + + E
Sbjct: 816 ENLVLTG-----SHAVSGTGNALANILDGSQNNAANELRGLGGNDTYIVGAGDTVIEEAN 870
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
D SY L + + + G +
Sbjct: 871 GGIDLVQAYVSYT-LGDHVENLSLLGSEALNGTGNGLANVLTGNDGSNVLDGGG------ 923
Query: 541 ADAPDLVQAGKDHFS 555
G D +
Sbjct: 924 GVDTLRGGKGDDTYI 938
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 64/510 (12%), Positives = 133/510 (26%), Gaps = 23/510 (4%)
Query: 55 ARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGI 114
L S + E S+ + NG + + D R G
Sbjct: 538 IDTVLASISYTLGNDLENLSLLGSEALNGTGNGLANVITGNDGSNVLDGGGGVDTLRGGK 597
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G T + L + N + G + + + + S
Sbjct: 598 GDDTYIVDLTARNTLEDSVLENLYEGNDTIQLRGGNVALATVTAIALANNVENLDASATG 657
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ ++++I + G +L N + + D+ GD++++
Sbjct: 658 TTRLNLTGNVLNNI-----LIGNAADNLLNGGAGADRLIGGDGNDTYVVDNLGDEVIEQA 712
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
G + + T + G + V ++ G++ ++ ++GN+ANNV G
Sbjct: 713 GEGTDLVQVAIATAGGTYTLGEHVENATLTNKVAFNLTGNALSNTLVGNAANNVLDGGLG 772
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDS 353
DV +G +G DT+ ++A I +E L +
Sbjct: 773 ADVMNGGAGNDTYIVD----DVGDTIIDSAGIDTVRASIAYTLGKGLENLVLTGSHAVSG 828
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+IL+ + + + + + + G + ++ + +
Sbjct: 829 TGNALANILDGSQNN-------AANELRGLGGNDTYIVGAGDTVIEEANGGIDLVQAYVS 881
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
D + + G L L G D +
Sbjct: 882 YTLGDHVENLSLLGSEAL-NGTGNGLANVLTGNDGSNVLDGGGGVDTLRGGKGDDTYIVD 940
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA----LEY 529
D + G A + E + + L
Sbjct: 941 LMANNALEDRVVEN-ANEGIDTIVLRGGSALPKAATIVLANNVENLDASGTGSIALNLTG 999
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGY 559
A++ LI + G D G
Sbjct: 1000 NAANNLLIGNQGNNTLNGGDGNDTLIGMGG 1029
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 50/378 (13%), Positives = 91/378 (24%), Gaps = 35/378 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ I + +E + D+ + I H L
Sbjct: 684 GAGADRLIGGDGNDTYVVDNLGDEVIEQAGEGTDLVQVAIATAGGTYTLGEHVENATLTN 743
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ-- 192
+ G + + N+ + + M + D + D +
Sbjct: 744 KVAFNLTGNALSNTLVGNAANNVLDGGLGADVMNGGAGNDTYIVDDVGDTIIDSAGIDTV 803
Query: 193 ---------------KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ G+ S N + + + GG+D +
Sbjct: 804 RASIAYTLGKGLENLVLTGSHAVSGTGNALANILDGSQNNAANELRGLGGNDTYIVGAGD 863
Query: 238 G----VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
IDL S G + + G+ +V+ GN +NV
Sbjct: 864 TVIEEANGGIDLVQAYVSYTLGDHVENLSLLGSEALNGTGNGLANVLTGNDGSNVLDGGG 923
Query: 294 GNDVFDGSSGLDTFFYY---APSYLYKIYRFENAIIVYDANEHKQDF--------LSDVE 342
G D G G DT+ + ++ N I ++VE
Sbjct: 924 GVDTLRGGKGDDTYIVDLMANNALEDRVVENANEGIDTIVLRGGSALPKAATIVLANNVE 983
Query: 343 RLRFADQ---CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
L + ++ ++L L G D M F G D
Sbjct: 984 NLDASGTGSIALNLTGNAANNLLIGNQGNNTLNGGDGNDTLIGMGGFDTLTGGRGADTFR 1043
Query: 400 DSYLYLGSYDDLRNVFGS 417
+ +LG V
Sbjct: 1044 FALTWLGMNSGPDAVITD 1061
Score = 45.2 bits (105), Expect = 0.032, Method: Composition-based stats.
Identities = 51/373 (13%), Positives = 102/373 (27%), Gaps = 63/373 (16%)
Query: 12 RIADHLLRDQYWSNYFIR-YKPDVLTTHRLSFDITELNPNAQEVARWALGEW--SKVVDL 68
AD+LL ++ I D L ++ E ++ + A+ + +
Sbjct: 675 NAADNLLNGGAGADRLIGGDGNDTYVVDNLGDEVIEQAGEGTDLVQVAIATAGGTYTLGE 734
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI--------- 119
E ++ + + F + N T ++ + ADV G G T
Sbjct: 735 HVENATLTNKVAFNLTGNALSNTLVGNAANNVLDGGLGADVMNGGAGNDTYIVDDVGDTI 794
Query: 120 ----LSHNALHEIGHALG--------------------LMHPGSYNGGYPVYGVDNDYEN 155
I + LG L + + + N
Sbjct: 795 IDSAGIDTVRASIAYTLGKGLENLVLTGSHAVSGTGNALANILDGSQNNAANELRGLGGN 854
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN----IYKIEV 211
D+++ + + + + + D V + G+ + N +
Sbjct: 855 DTYIVGAGDTVIEEANGGIDLVQAYVSYTLGDHVENLSLLGSEALNGTGNGLANVLTGND 914
Query: 212 QQK---DSPFIQTIYDSGGDDLLDLT-------------LIGGVKNYIDLNTES------ 249
+ T+ GDD + + I L S
Sbjct: 915 GSNVLDGGGGVDTLRGGKGDDTYIVDLMANNALEDRVVENANEGIDTIVLRGGSALPKAA 974
Query: 250 -WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
E ++ ++ G++ N+++IGN NN GND G G DT
Sbjct: 975 TIVLANNVENLDASGTGSIALNLTGNAANNLLIGNQGNNTLNGGDGNDTLIGMGGFDTLT 1034
Query: 309 YYAPSYLYKIYRF 321
+ ++
Sbjct: 1035 GGRGADTFRFALT 1047
>gi|126741360|ref|ZP_01757036.1| Neutral zinc metallopeptidase [Roseobacter sp. SK209-2-6]
gi|126717565|gb|EBA14291.1| Neutral zinc metallopeptidase [Roseobacter sp. SK209-2-6]
Length = 644
Score = 184 bits (468), Expect = 3e-44, Method: Composition-based stats.
Identities = 117/497 (23%), Positives = 188/497 (37%), Gaps = 42/497 (8%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
+ + +A+ L + + +++++ +I+ L Q++ARWA W V ++
Sbjct: 51 SLDDLANFLTHGYW---GGSSRSFNTSGSNQITVNISGLTAAGQQLARWAFEAWEAVANI 107
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHNALH 126
F ET + I F +++G + + + + W G + +H
Sbjct: 108 DFVETLGSAQITFDDNDSGAYASSSTSGTTILSSEVNVSTAWLANSGTTIDSYSFSTYVH 167
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCATPMV 185
EIGHALGL H G YN G YGVD + NDS+ S+MSYF +++ +AS + M+
Sbjct: 168 EIGHALGLGHQGDYN-GNATYGVDETFSNDSWQVSIMSYFDQSENTTTNASRAALISTMM 226
Query: 186 SDIVAVQKIYGAP---KGSLGNNIYKIEVQQ-------------------KDSPFIQTIY 223
SDIVA+Q +YGAP + GN + + TIY
Sbjct: 227 SDIVAIQNLYGAPGTSSATAGNTTWGANTTLSGYMADAMNALASSRNSSVNGNSVAFTIY 286
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G D+LDL+ + +DLN E++S + G N+ IA+ T+IE SGND ++GN
Sbjct: 287 DVDGYDILDLS-YNSTNDRVDLNGEAFSDVSGLIGNLGIARGTLIEEFRAGSGNDTIVGN 345
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVE 342
A N + + G D +G +G DT + S ++ + + +
Sbjct: 346 DAANRIYGNGGTDTIEGGTGYDTLY--GGSGNDSLFGGSGRDSLRGDIGNDSLTGGTGDD 403
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----T 398
L D L A + + G D G D+
Sbjct: 404 TLYGGDGDDRLFGNTSLDTLYGGAGNDYISAGDGVDFVNGDAGNDTIHGRSGWDLLNGND 463
Query: 399 FDSYLYLGSYDDLRNVFGSD-----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
+ +Y DD N G D A + G A ++ L
Sbjct: 464 GNDSIYGSQGDDTLNGGGDDDWLSGGSAWDVLFGNDGNDTLYGNFGSDVQSGGAGNDQLF 523
Query: 454 NAFADAPDLVQVGKDHF 470
D G D
Sbjct: 524 GGTGDDSLRGGDGNDTL 540
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/289 (14%), Positives = 74/289 (25%), Gaps = 9/289 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
N + D G G ++ + + +G
Sbjct: 335 AGSGNDTIVGNDAANRIYGNGGTDTIEGGTGYDTLYGGSGNDSLFGGSGRDSLRGDIGND 394
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G +YG D D + Y + + A G + +
Sbjct: 395 SLTGGTGDDTLYGGDGDDRLFGNTSLDTLYGGAGNDYISAGDGVDFVNGDAGNDTIHGRS 454
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESW 250
G + + S T+ G DD L L G N
Sbjct: 455 GWDLLNGND----GNDSIYGSQGDDTLNGGGDDDWLSGGSAWDVLFGNDGNDTLYGNFGS 510
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G N + T +S+ G GND + GN + +G+D+ G + DTF +
Sbjct: 511 DVQSGGAGNDQLFGGTGDDSLRGGDGNDTLQGNQGVDRLDGGAGDDLLRGGTLRDTFVFN 570
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+I FE + + + + + V
Sbjct: 571 TGYDNDEINDFEEHRDFLLLSTSLTGGETSAANILSTYGSVVNGQVVFD 619
>gi|110598202|ref|ZP_01386479.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Chlorobium ferrooxidans DSM
13031]
gi|110340216|gb|EAT58714.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Chlorobium ferrooxidans DSM
13031]
Length = 557
Score = 184 bits (468), Expect = 3e-44, Method: Composition-based stats.
Identities = 93/362 (25%), Positives = 132/362 (36%), Gaps = 43/362 (11%)
Query: 46 ELNPNAQEVARWALGEWSKVVDLTFEETSIH----SDIKFISSNN-----GYVCTPRYDS 96
L AL W+ V L F E + D + S+ G+ P
Sbjct: 73 GLTAAQIAEVNHALQTWADVALLNFTEVADDPDSVGDFRLAFSSAVDGYWGWCYFPDSTW 132
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
++ + G+ ++ +HE GH LGL HPG+Y+ G + D
Sbjct: 133 ASAGDVWINPLFATGSSWTSGSFNYYSLIHETGHGLGLKHPGNYSEGSSSTEIYFPASLD 192
Query: 157 SFLTSVMSYFMPQDSMMDAS-----FGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIE 210
SVMSY Q D S TPMV DI A+Q +YG GN Y +
Sbjct: 193 YRNYSVMSYNDFQTWFFDTSLQEYIAVVPETPMVYDIEAIQYLYGTNNNYRTGNTTYTFD 252
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-----------GGYEKN 259
+PF ++I+DSGG D +D++ IDL S+S++ N
Sbjct: 253 P---ATPFYKSIWDSGGTDTIDISNFSTDC-TIDLTPGSYSTLHYINTGTRSDLYDGSNN 308
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYY 310
+ IA +E V G SGND + GN A N + SGND +G G D Y
Sbjct: 309 LGIAFGVTLEMVNGGSGNDTIKGNRAGNSLYGGSGNDTVTGGAGDDILNGGDGTDKAVYS 368
Query: 311 APSYLYKIYRFENAIIVY----DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
Y I A+ D +S E+ +FAD + V +
Sbjct: 369 GNFSDYSISYDGATDTYTITDKSADRDGSDRVSGFEQFQFADAVKADILVPTVTQFSPAD 428
Query: 367 SY 368
Sbjct: 429 GA 430
>gi|3493595|gb|AAC33448.1| ZapE [Proteus mirabilis]
Length = 687
Score = 183 bits (464), Expect = 8e-44, Method: Composition-based stats.
Identities = 85/300 (28%), Positives = 115/300 (38%), Gaps = 26/300 (8%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
GT LHE+GHALGL H Y + D ++ S SVM Y +P
Sbjct: 274 NNKYQPGTYHYKVILHEVGHALGLNHSWQY-----LEYKDKNHVLASLKYSVMGYDIPTS 328
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPF---------IQ 220
D Y T M+ DI+ +Q +YG L NNIY + + +
Sbjct: 329 EHADFGGLYPMTFMLLDILLLQYLYGPNMTTRLENNIYGFHSNTGRAAYSLKSIEDKLVS 388
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
I+DSGG D LD +L + I+LN +S IGG N++IA T+IE+ +G SG+D +
Sbjct: 389 CIWDSGGIDTLDFSLYTVNQ-VINLNEGCFSDIGGLRSNISIAYKTIIENAIGGSGHDTI 447
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
IGNSANN GND DG G D + +Y +Y
Sbjct: 448 IGNSANNELLGGDGNDTIDGGLGNDHLY--GGMGNDILYGDIGNDYLYGGIGDD------ 499
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
L L + L G D F +G D+ F
Sbjct: 500 --ILHGGMGNDILHGSMGNDYLYGNKGNDQLFGGDGDDTLVDYYGSNTFIGGKGNDLLFS 557
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 63/196 (32%), Gaps = 28/196 (14%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWS 251
A LG + +Y G+D+L + GG+ + I
Sbjct: 452 ANNELLGGD---GNDTIDGGLGNDHLYGGMGNDILYGDIGNDYLYGGIGDDILHGGMGND 508
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-----------G 300
+ G N + + + + G G+D ++ +N F GND+ G
Sbjct: 509 ILHGSMGNDYLYGNKGNDQLFGGDGDDTLVDYYGSNTFIGGKGNDLLFSISKAGHNELQG 568
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ-------DFLSDVERLRFADQCIDS 353
G D F+ +Y + DF ++ +++ F DQ
Sbjct: 569 GEGNDIFY--CGLGTNLLYGEQGNDTFNFLCHKGAKSYNLIFDFNTNEDKIIFVDQNYKK 626
Query: 354 VNVKQRSILEYTASYE 369
+++ + +E + E
Sbjct: 627 IDISKMKRVEQLSGNE 642
Score = 47.1 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 60/413 (14%), Positives = 107/413 (25%), Gaps = 33/413 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGI--GKGTILSHNALHEIGHAL 132
H I+F + G+ P S +IN D+ + I + + +H+ H L
Sbjct: 180 SHGSIEFSYTTRGFATYPSRYSTPIKKINIDEQYQYSGTIFLNLSSHQYYKIIHQ--HDL 237
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
N G DN T+ + + + ++ Y V
Sbjct: 238 DNYIKTEGNIGDAFNFKDNGTVLIIKKTNTLIETLKNNKYQPGTYHYKVILH-----EVG 292
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G + YD + D GG+ + +
Sbjct: 293 HALGLNHSWQYLEYKDKNHVLASLKYSVMGYDIPTSEHADF---GGLYPMTFMLLDILLL 349
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
Y NMT I ++G S + S G+DT +
Sbjct: 350 QYLYGPNMTTRLENNIYGFHSNTGRAAYSLKSIEDKLVS-----CIWDSGGIDTLDFSLY 404
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ I E S++ + + +++ + ++ +L+
Sbjct: 405 TVNQVINLNEGCFSDIGG------LRSNI-SIAYKTIIENAIGGSGHDTIIGNSANNELL 457
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGA-----AA 423
G D + G DI + + YLY G DD+ + +
Sbjct: 458 GGDGNDTIDGGLGNDHLYGGMGNDILYGDIGNDYLYGGIGDDILHGGMGNDILHGSMGND 517
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
Y G + D L I + H G E
Sbjct: 518 YLYGNKGNDQLFGGDGDDTLVDYYGSNTFIGGKGNDLLFSISKAGHNELQGGE 570
>gi|167648839|ref|YP_001686502.1| serralysin [Caulobacter sp. K31]
gi|167351269|gb|ABZ74004.1| Serralysin [Caulobacter sp. K31]
Length = 727
Score = 183 bits (463), Expect = 1e-43, Method: Composition-based stats.
Identities = 119/574 (20%), Positives = 181/574 (31%), Gaps = 133/574 (23%)
Query: 4 IKPVYTTERIADHLLRDQY-WSNYFIRYKPD----------------------------- 33
KPV+T E+ + L R W+ + +
Sbjct: 50 GKPVFTIEQATEQLNRGGAGWTPGVVDHAVPRDGDVSVLNFGFHTAQSMFAEPYVYEEGG 109
Query: 34 VLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKFISSNN------ 86
L F E + AR A+ W ++ T E++ +DI F + N
Sbjct: 110 ELYGRTEYFGFAEFTEPQKAAAREAMASWDDLIAPTLVESAPEVADITFANYTNRPGTQA 169
Query: 87 ----GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
Y TP ++ + + +G H HE GHALGL HPG YN
Sbjct: 170 YAYLPYDYTPDNADLIAGDVWVSANQPSNFQLDEGLYGIHTLTHESGHALGLEHPGDYNA 229
Query: 143 G---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMD------ASFGYCATPMVSDIVAVQK 193
Y + +Y DS S+MSYF ++ ++ Y +TP+V DI A+Q
Sbjct: 230 APGVTITYADNAEYYQDSRAYSIMSYFAASETGARHFDFNISTTVYASTPLVHDIAAIQA 289
Query: 194 IYGAP-KGSLGNNIYKIEVQQKDSPFIQT--------IYDSGGDDLLDLTLIGGVKNYID 244
IYGA G+ Y + T I+D+GG+D LD + + ID
Sbjct: 290 IYGADMTTRTGDTTYGFNSNAGRDSYDFTKTPAPVMAIWDAGGNDTLDASGYHTDQ-IID 348
Query: 245 LNTESWSSIGG--------------------------------------------YEKNM 260
L S SSIGG N+
Sbjct: 349 LTPGSLSSIGGVTYDTAPSFEQVNANRAAAGYAPVALATYTSNMALLASNPVVGRLTDNV 408
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPS 313
IA IE+ +G SG+D +IGN+ N ++GND DG +G D + +
Sbjct: 409 AIAYGATIENGIGGSGSDRLIGNAVGNTLTGNAGNDTLDGKAGADILYGGDGNDVLDGGA 468
Query: 314 YLYKIYRFENA---------IIVYDANEHKQDFLSD---------VERLRFADQCIDSVN 355
++ + + D + VE LR + +
Sbjct: 469 GFDRMIGGAGDDRYIIDTLHDAIREMPNEGVDTVWSSVNYTLVPHVENLRLTGEAMIGTG 528
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
++++ L G D G D F D L
Sbjct: 529 NGLANVIDGNDISNKLSGEAGNDTLSGFGGVDYLEGGAGNDSLFGGDG----TDFLLGGA 584
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G+DR + G + AF + S
Sbjct: 585 GADRLNGGAGFDILIGGAGNDVYAFDVSAFPDSD 618
>gi|149185554|ref|ZP_01863870.1| hypothetical protein ED21_21054 [Erythrobacter sp. SD-21]
gi|148830774|gb|EDL49209.1| hypothetical protein ED21_21054 [Erythrobacter sp. SD-21]
Length = 960
Score = 183 bits (463), Expect = 1e-43, Method: Composition-based stats.
Identities = 126/657 (19%), Positives = 201/657 (30%), Gaps = 96/657 (14%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
+ ++I+++L + + + ++FD++ L+ + + R +L W +
Sbjct: 335 SVDQISEYLSSRWFDDMGQQAGGWALDASRTITFDLSGLDTSLHDTVRVSLAAWGDAAGI 394
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
TF E + + F+E D G T + E+
Sbjct: 395 TFVEAAGGA---MQFVTGAENDASVTRVGGFIESATVTIDPATPGFASETRAYQVVMQEV 451
Query: 129 GHALGLMHPGSYNGGYPVYGVDND--YENDSFLTSVMSYFMPQDSMMDASFGYCA----T 182
G ALGL H G YN G V +D Y NDS + +VMS F +++ AS GY + T
Sbjct: 452 GFALGLGHAGQYNNGQYVSYRAHDLVYLNDSNMLTVMSGFDNSSNVLLASQGYSSFDAIT 511
Query: 183 PMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKD-------SPFIQTIYDSGGDDLLDLT 234
PM++D+ A+Q IYGAP G++ Y D + T+ DS G D LD +
Sbjct: 512 PMMADVAAIQAIYGAPTETRTGDDTYGFNSTAGDLYDAAVTTNAAYTVVDSAGVDTLDYS 571
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ I+L + ++GG N++IA TVIE+ +G SGND V GN N+ +G
Sbjct: 572 QHAQSQ-VINLVSGRLMNVGGMTGNVSIAAGTVIENAIGGSGNDFVRGNDVANLIQGLAG 630
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND G G DT IY ++ +S R+ +
Sbjct: 631 NDTIRGLGGNDTV--EGGEGDDLIYGNNGNDLLS--------AVSGFNRIFGNAGDDVIL 680
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ + + G D + G D+
Sbjct: 681 GGSGFDKIFGGPGNDQMFGGAGDDFVMAWDGNNHMEGGLGSDVM---------------- 724
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
G HG + R D L ++ L + D
Sbjct: 725 VGGRGNDTLLGGDDHGWDKLRGGDGDDVLIAGWGNDQLTGGTGNDWMDGGGAHD---FLN 781
Query: 475 CEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
+EG F L +
Sbjct: 782 GKEGNDTMFGGRGT------------------------------------DILWGGDGDD 805
Query: 535 DLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
+ D + G D G FN D F S
Sbjct: 806 IIDGGLHDDRINGEQGND--LLTGGGGADVFVFNNYAGF----DTITDFESGVDLIEL-- 857
Query: 595 ITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYD 651
+ E R + F A + +D +++ D G G
Sbjct: 858 LRPAFTEIRFGTLWQSAFTEG-----TQAADAGDRIIYDKATGNIWYDADGTGAGEQ 909
>gi|150377401|ref|YP_001313996.1| serralysin [Sinorhizobium medicae WSM419]
gi|150031948|gb|ABR64063.1| Serralysin [Sinorhizobium medicae WSM419]
Length = 648
Score = 183 bits (463), Expect = 1e-43, Method: Composition-based stats.
Identities = 108/557 (19%), Positives = 181/557 (32%), Gaps = 98/557 (17%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSF--------DITELNPNAQEVARWA 58
T D LL D W+ + + S LN Q AR
Sbjct: 8 APTGNAYIDGLLGDWKWAVKDFTFSFPTSASFYGSGYGNGEPQKGFAALNAAQQTTARAV 67
Query: 59 LGEWSKVVDLTFEETSIHS----DIKFISSNN---GYVCTPRYDSRYFMEINFDKADVWR 111
++S V ++F E + + D++ SS+ + P + + F+ + +
Sbjct: 68 FDQFSSVAKVSFTEIAESATKHADVRLASSDAPSTAWAYFPSTAAEG-GDAWFNSSSGYY 126
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM---- 167
KG LHEIGHALGL H N DS +VMSY
Sbjct: 127 SRPMKGNYAYLTFLHEIGHALGLEHAHEGNV--------MPANRDSMEYTVMSYRSYVGA 178
Query: 168 -PQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK----------- 214
++ ++GY + M+ DI A+Q IYGA GN Y+
Sbjct: 179 STTTGYINETWGYAQSLMMYDIAALQHIYGADFTTQSGNTTYRWSPTSGEMFINGVGQNA 238
Query: 215 --DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE-------------KN 259
+ + T++D GG D D + +DL W++ + N
Sbjct: 239 PGGNKILLTVWDGGGTDTYDFSNYTTALK-VDLRPGEWTTTSAVQLAKLRYDDSKVAIGN 297
Query: 260 MTIA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ A ++IE+ G +GNDV+ GN+A NV + + GND G++G D +
Sbjct: 298 IANALQYQSDARSLIENAKGGAGNDVITGNAAANVLWGNGGNDRLIGANGNDNLV--GGA 355
Query: 314 YLYKIYRFENAIIV-----------------YDANEHKQDFLSDVERLRFADQCIDSVNV 356
++ + + E D VERL +
Sbjct: 356 GADRLEGGNGNDLANYYNAAAGVVADIYSPGSNRGEAAGDTYVSVERLYGSAFGDTLAGD 415
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD-ITFDSYLYLGSYDDLRNVF 415
+ ++L A + L G D G D + + + L +Y +
Sbjct: 416 RFANLLNGLAGNDVLHGRAGNDTLIGGDGNDSLVGGAGADRLDGGNGVDLANYYNAALGL 475
Query: 416 GSDRGAAARH---------------YITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+D + + Y + R + L +A ++ L +
Sbjct: 476 VADLYSPVSNTGEAAGDTYLSVERLYGSAFNDSLRGDNIANLLNGLAGNDVLNGRGGNDT 535
Query: 461 DLVQVGKDHFSNFGCEE 477
+ G D G +
Sbjct: 536 LIGGEGADRLIGGGGSD 552
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 55/208 (26%), Gaps = 27/208 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW------------SSIGGY 256
+ G+DL + + S + G
Sbjct: 347 GNDNLVGGAGADRLEGGNGNDLANYYNAAAGVVADIYSPGSNRGEAAGDTYVSVERLYGS 406
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
T+A + G +GNDV+ G + N+ GND G +G D L
Sbjct: 407 AFGDTLAGDRFANLLNGLAGNDVLHGRAGNDTLIGGDGNDSLVGGAGADRLDGGNGVDLA 466
Query: 317 KIYRFENAII------VYDANEHKQDFLSDVERL---------RFADQCIDSVNVKQRSI 361
Y ++ V + E D VERL R + + +
Sbjct: 467 NYYNAALGLVADLYSPVSNTGEAAGDTYLSVERLYGSAFNDSLRGDNIANLLNGLAGNDV 526
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEF 389
L + LI G D F
Sbjct: 527 LNGRGGNDTLIGGEGADRLIGGGGSDMF 554
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/307 (14%), Positives = 79/307 (25%), Gaps = 30/307 (9%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ + A+V G ++ N + G NG +
Sbjct: 317 GGAGNDVITGNAAANVLWGNGGNDRLIGANGNDNLVGGAGADRLEGGNGNDLANYYNAAA 376
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY---KIE 210
+ + S S S D +A + G GN++
Sbjct: 377 GVVADIYSPGSNRGEAAGDTYVSVERLYGSAFGDTLAGDRFANLLNGLAGNDVLHGRAGN 436
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE---------------------S 249
++ G D LD + NY + S
Sbjct: 437 DTLIGGDGNDSLVGGAGADRLDGGNGVDLANYYNAALGLVADLYSPVSNTGEAAGDTYLS 496
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G N ++ + + G +GNDV+ G N+ G D G G D F +
Sbjct: 497 VERLYGSAFNDSLRGDNIANLLNGLAGNDVLNGRGGNDTLIGGEGADRLIGGGGSDMFVF 556
Query: 310 -----YAPSYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
P+ + I F I D + LS + F + +
Sbjct: 557 QTATQSRPAAMDVIDDFARGIDRIDLRSIDASSNLSGDQAFLFIGGNGLHGKSGELNFRS 616
Query: 364 YTASYED 370
S +
Sbjct: 617 GIVSGDV 623
>gi|67922217|ref|ZP_00515731.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Crocosphaera watsonii WH 8501]
gi|67855920|gb|EAM51165.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Crocosphaera watsonii WH 8501]
Length = 670
Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats.
Identities = 85/385 (22%), Positives = 147/385 (38%), Gaps = 63/385 (16%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITE--------LNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ F+ P+ S ++ + + + AL +S + ++ F+E
Sbjct: 247 TYSFMTTVPNYYDIDGDSVNVDGNLATLLQPFSEDTTKFIVDALKLYSDIANIQFQEVDE 306
Query: 76 HSDI------KF----------ISSNNGYVCTPR------YDSRYFMEINFDKADVWRYG 113
++ F +S G TP Y + +I D
Sbjct: 307 TANGGEGGTLNFGYAFLTDQMGMSDAAGLAYTPSSLLEFPYSPNFDKKIGDIWIDRNETN 366
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
GT + +HEIGHALGL HP + G + G D++ ++MSY + +
Sbjct: 367 FKPGTDVFFTIIHEIGHALGLEHPHETSDGDQIVGFK-----DNYEYTIMSYNESKLNP- 420
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
+ TP + D+ A+Q +YG G++IY E + F+QTI+D+GG+D +
Sbjct: 421 ---GVFPRTPQILDVAAIQYLYGVNNNTRSGDDIYSWEDNEN---FMQTIWDTGGNDTIS 474
Query: 233 LTLIGGVKNYIDLNTESWS------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS-- 284
+ IDL + + N+ I + +IE++ G G+D +IGN+
Sbjct: 475 AAKQS-NEVTIDLAAGYANIGLNNKTYKPARSNLQIPVNVIIENIKGGQGDDTLIGNNID 533
Query: 285 -------ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA----IIVYDANEH 333
N+ + GND DG G DT + Y +N I +
Sbjct: 534 NRLEGNGGNDTLEGNGGNDFIDGGEGEDTAIFSDAPQNYDYEVIDNNQIKIIHARGSESV 593
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQ 358
+ D L ++E L F D + +
Sbjct: 594 QTDILINIENLNFLDTNLTVHTLTA 618
>gi|197284188|ref|YP_002150060.1| metalloprotease [Proteus mirabilis HI4320]
gi|194681675|emb|CAR40757.1| putative metalloprotease [Proteus mirabilis HI4320]
Length = 687
Score = 181 bits (458), Expect = 4e-43, Method: Composition-based stats.
Identities = 85/300 (28%), Positives = 115/300 (38%), Gaps = 26/300 (8%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
GT LHE+GHALGL H Y + D ++ S SVM Y +P
Sbjct: 274 NNKYQPGTYHYKVVLHEVGHALGLSHSWQY-----LEYKDKNHVLASLKYSVMGYDIPTS 328
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPF---------IQ 220
D Y T M+ DI+ +Q++YG L NNIY + +
Sbjct: 329 EHADFGGLYPMTFMLLDILLLQQLYGENMTTRLENNIYGFHSNTGRVAYSLKSIEDKLVS 388
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
I+DSGG D LD +L + I+LN S+S IGG N++IA T+IE+ +G SG+D +
Sbjct: 389 CIWDSGGIDTLDFSLYTVNQ-VINLNEGSFSDIGGLRSNISIAYKTIIENAIGGSGHDTI 447
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
IGNSANN GND G G D + +Y +Y
Sbjct: 448 IGNSANNELIGGDGNDTIKGGLGNDHLY--GGMGNDILYGDIGNDYLYGGIGDD------ 499
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
L L + L G D F +G D+ F
Sbjct: 500 --ILHGGMGNDILHGSMGNDYLYGNKGNDKLFGGDGDDTLVDYYGNNTFIGGKGNDLLFS 557
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 48/154 (31%), Gaps = 22/154 (14%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ I + TI G+D L GG+ N I + G +
Sbjct: 445 DTIIGNSANNELIGGDGNDTIKGGLGNDHL----YGGMGNDILYGDIGNDYLYGGIGDDI 500
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFYYAP 312
+ + + GS GND + GN N+ F G+D G G D F +
Sbjct: 501 LHGGMGNDILHGSMGNDYLYGNKGNDKLFGGDGDDTLVDYYGNNTFIGGKGNDLLFSISK 560
Query: 313 SYLYKIYRFENAIIVYDA-------NEHKQDFLS 339
+ ++ E I Y E D +
Sbjct: 561 AGRNELQGGEGNDIFYCGLGTNLLYGEQGNDTFN 594
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 60/186 (32%), Gaps = 29/186 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIA 263
K +Y G+D+L + GG+ + I + G N +
Sbjct: 461 GNDTIKGGLGNDHLYGGMGNDILYGDIGNDYLYGGIGDDILHGGMGNDILHGSMGNDYLY 520
Query: 264 QHTVIESVVGSSGNDVVIGNSANNV--------------------FFESSGNDVFDGSSG 303
+ + + G G+D ++ NN GND+F G
Sbjct: 521 GNKGNDKLFGGDGDDTLVDYYGNNTFIGGKGNDLLFSISKAGRNELQGGEGNDIFYCGLG 580
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + + + ++ A DF ++ +++ F DQ +++ + +E
Sbjct: 581 TNLLYGEQGNDTFNFLCYKGAKSYNLIF----DFNTNEDKIIFVDQNYKKIDISKMKRVE 636
Query: 364 YTASYE 369
+ E
Sbjct: 637 QLSGNE 642
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 49/171 (28%), Gaps = 16/171 (9%)
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
S G+DT + + I E + S++ + + +++
Sbjct: 390 IWDSGGIDTLDFSLYTVNQVINLNEGSFSDIGG------LRSNI-SIAYKTIIENAIGGS 442
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRN 413
+ ++ +LI G D + G DI + + YLY G DD+ +
Sbjct: 443 GHDTIIGNSANNELIGGDGNDTIKGGLGNDHLYGGMGNDILYGDIGNDYLYGGIGDDILH 502
Query: 414 VFGSDRGA-----AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
+ Y G + D L + I +
Sbjct: 503 GGMGNDILHGSMGNDYLYGNKGNDKLFGGDGDDTLVDYYGNNTFIGGKGND 553
>gi|38455763|gb|AAR20883.1| alkaline protease [Pseudomonas aeruginosa]
Length = 459
Score = 181 bits (458), Expect = 5e-43, Method: Composition-based stats.
Identities = 72/358 (20%), Positives = 134/358 (37%), Gaps = 48/358 (13%)
Query: 3 NIKPVYTTERIADHLLRDQ------------YWSNYFIR-----------YKPDVLTTHR 39
N YT + +LR+Q S F+ + D+ + +
Sbjct: 14 NGHESYTVDEGGRQMLREQGTWQKAPGESVITISYSFLTKQNDFFNSPWKSRSDIYSLGK 73
Query: 40 LSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNG-------YVCTP 92
SF ++ + A+ +L WS V +L F + + N + P
Sbjct: 74 FSFAFSQAD----RQAKLSLQSWSDVTNLHFVDGKQANQNDLTGGNFSSSVGGADFAFLP 129
Query: 93 RYDSRYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGV 149
++ + + + + G HE+ H LGL HP Y+ G
Sbjct: 130 DVENSIKSQSWYLINSSYSTNVNPSNGNYGRQTLTHELNHTLGLSHPEDYHAGERDPTYA 189
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYK 208
D Y D+ S + Q++ D Y + P++ I ++QKIYGA G+
Sbjct: 190 DATYAEDTRKASTNMSWEEQNTGQDFKGAYSSAPLMGGIASLQKIYGANLTTRKGDTYVG 249
Query: 209 IEVQQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
S + +++D+ G+ LD + + I+ N ++ S + ++N
Sbjct: 250 FNSNTQRDFYSATSSSSKIVFSVWDAAGNQTLDFSGFTQNQK-INANEKALSEVNNLKRN 308
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+T+A +E+ +G SG+D++IGN NV + D+ G G + + A +
Sbjct: 309 VTLAAEVTVENALGGSGSDLLIGNDVANVIKGGANGDILYGRLGANQLWGGANGANFV 366
>gi|159045942|ref|YP_001534736.1| neutral zinc metallopeptidase [Dinoroseobacter shibae DFL 12]
gi|157913702|gb|ABV95135.1| neutral zinc metallopeptidase [Dinoroseobacter shibae DFL 12]
Length = 451
Score = 180 bits (457), Expect = 6e-43, Method: Composition-based stats.
Identities = 116/386 (30%), Positives = 160/386 (41%), Gaps = 41/386 (10%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTT-HRLSFDITELNPNAQEVARWALGEWSK 64
P +T +++AD L + S DV + DI+ L Q A AL W+
Sbjct: 36 PTFTVDQVADQLKSGFFKS---REASWDVEPGGEAIDVDISRLTEKGQFYAELALDAWTM 92
Query: 65 VVDLTFEETS--------IHSDIKFISSNNGYVCTPRYDSRYFME---INFDKADVWRYG 113
+ F T S I F +++G P +S + IN + + G
Sbjct: 93 TTGIEFNITELEIFAFGFTRSGIIFDDTDSGAYAQPIVNSENEIYTARINISQDWIRNDG 152
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSM 172
+HEIGHALGL H G+YN G Y D Y NDS+ S+MSYF ++
Sbjct: 153 ETIDNYSFQTFIHEIGHALGLEHAGNYN-GNAKYSTDALYTNDSWQMSIMSYFSQTDNAS 211
Query: 173 MDASFGYCATPMVSDIVAVQKIYG-APKGSLGNNIYKIEVQQKDS--------------- 216
+DASF Y TPM++DI AVQ++YG A GN IY Q S
Sbjct: 212 IDASFAYVVTPMIADITAVQQLYGVAGDLRPGNTIYGQPTTQGGSLMSMADGYYEDFGDT 271
Query: 217 --PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
P TI D GG D ++ + + +N I+LN + S + G + N+ I TVIE VV
Sbjct: 272 SRPITYTIIDDGGFDAINFSDVTADQN-INLNGGAVSDVNGLKGNLVIFSTTVIEYVVSG 330
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SGND + GN ANN FF G D G G D + + ++
Sbjct: 331 SGNDTLTGNGANNHFFAGDGRDTIFGGDGDDILEGQGGIDILTGGAGRDGFVLSGTGFDG 390
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRS 360
D ++D F D S
Sbjct: 391 LDIVTD-----FTDGEDLLFFAAADS 411
>gi|77460926|ref|YP_350433.1| peptidase M10A and M12B, matrixin and adamalysin [Pseudomonas
fluorescens Pf0-1]
gi|77384929|gb|ABA76442.1| putative metallopeptidase with Hemolysin-type calcium-binding
region [Pseudomonas fluorescens Pf0-1]
Length = 1133
Score = 180 bits (456), Expect = 7e-43, Method: Composition-based stats.
Identities = 114/573 (19%), Positives = 179/573 (31%), Gaps = 57/573 (9%)
Query: 23 WSNYFIRYKPDVLTTHRLSFD----ITELNPNAQEVARWALGEWSKVVDLTFE----ETS 74
+ FI + S + + L + AL WS V ++TF +
Sbjct: 41 LTYSFIAPRTSYFANAYSSVNEYNAVFSLYTGQKTAISNALSTWSAVANVTFTMVRESAA 100
Query: 75 IHSDIKFISS------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
D++F + P + + KG+ +HEI
Sbjct: 101 SVGDLRFGGYSGMDNKTAAWAYLPDNTPK--GGDVWIGPSTDELFPSKGSYDYLTFVHEI 158
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHA+GL HP S P D +VMSY TPMV DI
Sbjct: 159 GHAIGLKHPFSAGTLNPTVLQPL---LDDVKYTVMSYNDNYS-------YQPTTPMVLDI 208
Query: 189 VAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+A+Q +YGA GN Y Q+ +TI+D+GG+D +D + I+LN
Sbjct: 209 LAIQSLYGANGLWQSGNTTYSWAPNQQ---IFETIWDAGGNDTIDASNQLASV-RINLNE 264
Query: 248 ESWSSIGGYEKNMT----------IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+S IG N+T IA IE+ VGS D +IGN+ +NV G D
Sbjct: 265 GQYSQIGKAFTNLTTNAAFNEGLGIAYGAKIENAVGSDFGDWLIGNALDNVLNGRGGADT 324
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC--IDSVN 355
+G +G DT++ + + I + ++VE L +++
Sbjct: 325 MEGGAGNDTYYVDNVGDVVIERGSSLSEIDTVISTISYTLGANVENLILQGGAENLNATG 384
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ L A L G D+ + + D ++ D + +
Sbjct: 385 NALNNTLRGNAGNNLLDGGTGADIMIGGLGNDTYVVDSLLDTVIETSNLPTEIDTVLSAV 444
Query: 416 GSDRGAAARHYITHGVK--EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS-- 471
GA + G G L A + L + G D +
Sbjct: 445 NFALGANLENLTLLGTADINGNGNAQNNVLIGNAGNNVLNGMGGLDTMIGGAGHDLYILD 504
Query: 472 ----NFGCEEGRFVTFDSYL--YLGSYD----DLRNVFGSDRGAAARHYITHGVKEGRNP 521
+E D+ Y+ DL + I G
Sbjct: 505 QAGELGLIQEQANEGTDTLYISYVAGAGTTVIDLNRNNLLNVENVTLDNINTGPFTVLGN 564
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ L + L AG D +
Sbjct: 565 TSSNVLIGNIGNNVLDGGIGADYMAGGAGNDTY 597
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/572 (11%), Positives = 144/572 (25%), Gaps = 38/572 (6%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
++LL ++ I + D N L + + E
Sbjct: 394 NAGNNLLDGGTGADIMIGGLGNDTYVVDSLLDTVIETSNLPTEIDTVLSAVNFALGANLE 453
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
++ + N ++ + D G G + A E+G
Sbjct: 454 NLTLLGTADINGNGNAQNNVLIGNAGNNVLNGMGGLDTMIGGAGHDLYILDQA-GELGLI 512
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+ G+ D ++++ ++ S+++
Sbjct: 513 QEQANEGTDTLYISYVAGAGTTVIDLNRNNLLNVENVTLDNINTGPFTVLGNTSSNVLI- 571
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-------IGGVKNYID 244
G++GNN+ + G+D + G ID
Sbjct: 572 --------GNIGNNV------LDGGIGADYMAGGAGNDTYYVDNIGDTVVETGNSLTEID 617
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ S G + + G++ N+ ++GN +N+ +G D G G
Sbjct: 618 TVLSTVSYALGNNVEVLALLGANNLNGTGNALNNYMVGNIGDNILNGGAGADTLIGGFGN 677
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE-RLRFADQCIDSVNVKQRSILE 363
DT+ + + I +++E + ++ + ++L
Sbjct: 678 DTYIVDNALDVVVETSNDPNEIDTVRASVNWQLGTNLENLTLTGNTNLNGNGNELNNVLV 737
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL----RNVFGSDR 419
A+ L + G D + L + ++ D L FG+
Sbjct: 738 GNAANNVLNGMGGLDTMIGGAGNDTYVLDQFGELALVQEQASEGTDTLYIAYTAGFGTTV 797
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYI--ASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ + +P + A + L + G D+ +
Sbjct: 798 IDLNGSNLQNVENVTLDPANTSPFSILGNAQNNTLFGNAGNNVLNGGAGIDNLIGGTGND 857
Query: 478 GRFVTFDSYLYLGSYDDLRN--------VFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
V + L + D + + G L
Sbjct: 858 TYIVDNQYDVVLETSTDPNEIDTIQSSVSWQLGANVENLTLTGNNNLNGNGNGLNNVLIG 917
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
A + L + G D + + E
Sbjct: 918 NAGNNVLNGMAGLDTMIGGTGNDTYVLDQFGE 949
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 73/534 (13%), Positives = 129/534 (24%), Gaps = 44/534 (8%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+E + S T D +N + + G T+L + + + +
Sbjct: 513 QEQANEGTDTLYISYVAGAGTTVIDLNRNNLLNVENVTLDNINTGPFTVLGNTSSNVLIG 572
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+G G + G + + + + + V
Sbjct: 573 NIGNNVLDGGIGADYMAGGAGNDTYYVDNIGDTVVETGNSLTEIDTVLSTVSYALGNNVE 632
Query: 191 VQKIYGAPKGSLGNNIYK-------IEVQQKDSPFIQTIYDSGGDDLLDLTL-------I 236
V + GA + N + T+ G+D +
Sbjct: 633 VLALLGANNLNGTGNALNNYMVGNIGDNILNGGAGADTLIGGFGNDTYIVDNALDVVVET 692
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
N ID S + G + G+ N+V++GN+ANNV G D
Sbjct: 693 SNDPNEIDTVRASVNWQLGTNLENLTLTGNTNLNGNGNELNNVLVGNAANNVLNGMGGLD 752
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ------C 350
G +G DT+ L + + + F + V L ++
Sbjct: 753 TMIGGAGNDTYVLDQFGELALVQEQASEGTDTLYIAYTAGFGTTVIDLNGSNLQNVENVT 812
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+D N SIL A L G +V G D Y +
Sbjct: 813 LDPANTSPFSIL-GNAQNNTLFGNAGNNVLNGGAGIDNLIGGTGNDTYIVDNQYDVVLET 871
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKD 468
+ D ++ + E L + + LI + G D
Sbjct: 872 STDPNEIDTIQSSVSWQLGANVENLTLTGNNNLNGNGNGLNNVLIGNAGNNVLNGMAGLD 931
Query: 469 HFSNFGCEEGRFVT--------------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ + LY+ + ++
Sbjct: 932 TMIGGTGNDTYVLDQFGELALVKEQANEGTDTLYVAYTAGFGTTVIDLNNSNLLNFENVT 991
Query: 515 VKEGRNP-------DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
+ G L A + L AG D F E
Sbjct: 992 LDPGNTSPFTVTGNALNNTLIGNAGNNVLNGGAGADLLTGGAGADTFVFSAVNE 1045
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 80/279 (28%), Gaps = 29/279 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLI-------GGVKNYIDLNTESWSSIGGYEKNMT 261
I + G+D + N ID S S G
Sbjct: 837 GNNVLNGGAGIDNLIGGTGNDTYIVDNQYDVVLETSTDPNEIDTIQSSVSWQLGANVENL 896
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY--APSYLYKIY 319
+ G+ N+V+IGN+ NNV +G D G +G DT+ L K
Sbjct: 897 TLTGNNNLNGNGNGLNNVLIGNAGNNVLNGMAGLDTMIGGTGNDTYVLDQFGELALVKEQ 956
Query: 320 RFENAIIVYDANEHKQDF----LSDVERLRFADQCID--------SVNVKQRSILEYTAS 367
E +Y A L++ L F + +D + L A
Sbjct: 957 ANEGTDTLYVAYTAGFGTTVIDLNNSNLLNFENVTLDPGNTSPFTVTGNALNNTLIGNAG 1016
Query: 368 YEDLIQVIGQDVFESMKHFYEF--------GLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
L G D+ F G RD+ D G DL +
Sbjct: 1017 NNVLNGGAGADLLTGGAGADTFVFSAVNEMGTGANRDVITDFSSLQGDKIDLSKFDANLL 1076
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
A + G + + ++++ S NA AD
Sbjct: 1077 SAGFNGFSFIGANDFTGAGQLRFVDHVLSGNVSGNAGAD 1115
>gi|89067540|ref|ZP_01155053.1| Possible Zn-dependent metalloprotease [Oceanicola granulosus
HTCC2516]
gi|89047109|gb|EAR53163.1| Possible Zn-dependent metalloprotease [Oceanicola granulosus
HTCC2516]
Length = 560
Score = 180 bits (456), Expect = 8e-43, Method: Composition-based stats.
Identities = 98/516 (18%), Positives = 160/516 (31%), Gaps = 50/516 (9%)
Query: 3 NIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPN--------AQEV 54
+ +P T + D L+ WS+ + ++
Sbjct: 11 DGRPTGGTNPLIDSLVWGGAWSDEEDGPVTVSYMFQSGRDPYAYFSDRPGYRWFDHEKDA 70
Query: 55 ARWALGEWSKVVDLTFEETSIH---------SDIKFISSNNGYVCTPRYDSR-YFMEINF 104
R A W V D+ FEE D + S G+ P + N+
Sbjct: 71 VRDAFAAWEAVADIRFEEVDDPERADIWYWIGDGSQMGSTLGWHEVPGEAVEPLYGAFNW 130
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG---------YPVYGVDNDYEN 155
G+ G LHEIGH LGL HP + ++
Sbjct: 131 QGFGWDDRGLKPGGYGFITVLHEIGHGLGLAHPHDGGYAEDATTFPGVSAPFADYGRHDL 190
Query: 156 DSFLTSVMSYFMPQDSMM----DASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIE 210
+ + + M+Y + + G+ ATPM DI A Q+IYGA G ++Y +
Sbjct: 191 NQGIWTTMTYNDGWATKFPEAWSETHGWQATPMALDIAAAQEIYGANMDHATGRDVYTLP 250
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL---------NTESWSSIGGYEKNMT 261
K I+D+GG D + G IDL S + G +T
Sbjct: 251 ADNKRGTGYTCIWDAGGIDKISHRG-GEEAAIIDLDDAPLTGRHAGGYVSYVKGVIGGVT 309
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK---- 317
IA VIE+ +G D + GN A+N+ G+D GS G D F +
Sbjct: 310 IANGVVIENAIGGRAGDRIRGNEAHNMLDGRGGDDHISGSRGDDRMFGGGGDDRLRGGRD 369
Query: 318 ---IYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ V+ + H + +S + LR + + + +
Sbjct: 370 DDIVAGGRGDDEVWGQSGHDRMSGMSGADVLRGGKGDDKAQGGSGDDTVRGNGGDDVVRG 429
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D + + G D + + R S+ A R Y +
Sbjct: 430 GRGDDRVYGGQGADDIWGGGGADKLYGGHDDARDTFLFRGKKQSEADAPDRIYRFESGTD 489
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ A + ++ L + +DH
Sbjct: 490 VIDLSRIDADPSLGGNQALDWSGKGPAAASVWLEDH 525
>gi|254464133|ref|ZP_05077544.1| serralysin [Rhodobacterales bacterium Y4I]
gi|206685041|gb|EDZ45523.1| serralysin [Rhodobacterales bacterium Y4I]
Length = 1158
Score = 179 bits (453), Expect = 2e-42, Method: Composition-based stats.
Identities = 104/339 (30%), Positives = 162/339 (47%), Gaps = 13/339 (3%)
Query: 4 IKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWS 63
KP YT ++IA +L + + + DV T +L+ +++ LN +E AR AL W+
Sbjct: 32 GKPTYTVDQIAQYLYKGFWEDTGRTQRSFDVQTGGQLTVNLSGLNATGKETARKALESWT 91
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
+ + F ET+ + I F +N+G + + + + + D W G
Sbjct: 92 ALTGIEFAETTGSAKITFDDNNSGAYASSTVSNGTILSSHINVDDGWS---AYGNYYLQT 148
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCAT 182
+HEIGHALGL H G+YN G YG D + NDS+ S+MSYF +++ +DASF Y AT
Sbjct: 149 FIHEIGHALGLGHTGNYN-GSASYGSDAHFANDSWQMSIMSYFSQSENTAVDASFAYLAT 207
Query: 183 PMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK------DSPFIQTIYDSGGDDLLDLTL 235
++DI AV +YG P G+ Y + + I DSGG D+++L
Sbjct: 208 AQLADIAAVHHLYGTPVNVETGDTTYGDGQTTGRFGMDLNGGWAVAIVDSGGTDVINLGS 267
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+ ++LN ++SS+ G N +IA TVIE+ + SG D + GN+A+NV +GN
Sbjct: 268 RSYNQ-TLNLNAGTFSSLNGKTGNFSIASGTVIENAITGSGIDSITGNAADNVLDSGAGN 326
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
D G DT + + + E
Sbjct: 327 DQISAGGGNDTLIGGTGADYLTGGAGADRFVYRKLGESG 365
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/581 (12%), Positives = 138/581 (23%), Gaps = 29/581 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D N S + + G T+L+ + +I G
Sbjct: 579 DGDDTLTGGNGSDKLYGGLGSD--SLDGGEGRNQLYGEDGDDTVLAGDGADKIDGGAGND 636
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G +YG D D + S Y + ++ G V +
Sbjct: 637 SLDGGGGRNQLYGEDGDDTVLAGDGSDKIYGGAGNDSLNGGGGRNQLYGEDGDDTV--LA 694
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESW 250
G + + G+D++ GG N + +
Sbjct: 695 GDSSDRIDGGA--GNDSLDGGGGNNRVEGGLGNDVIITGSGRDLLYGGDGNDTLSAGDGY 752
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + I+ + + G GND + N G+D G SG D
Sbjct: 753 NKADGGLGDDLISGGSGRDQFKGGDGNDTIAAGDGYNKADGGLGDDSISGGSGKDQL--S 810
Query: 311 APSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + S ++++ + + +
Sbjct: 811 GGDGDDTIAAGDGDNKADGGEGHDSITSGSGKDKIKGGLGNDTIAAGDGDNQVSGDDGDD 870
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G+D + +G +
Sbjct: 871 SITSGSGKDKIKGGLGNDTIAAGDGDNQISGDDGDDVITSGSGKDKIKGGLGEDTLSAGG 930
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G + D + + + + D G D+ + + D+ +
Sbjct: 931 GDNKLDGGDGNDVITSGSGSDKVQGGNGDDLIETGSGADNVNGGAGNDTILAGADADKVI 990
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
G G + +G D + A ++ + D A
Sbjct: 991 GGDGGDSLDGGDGDDKISA---GNGDDTADGGDGADKINGGAGNDTIRGGSGDDMLDGSA 1047
Query: 550 GKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISG 609
G D G + L D + A + +G AL I G
Sbjct: 1048 GSD--RLEGGAGADT--------LKGGADADVFVFASADDAGDILRDFRLGDGDALDIGG 1097
Query: 610 MQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYY 650
+ + NL + + K+V L D G+G
Sbjct: 1098 LLLELDTNLED--ALSSGSLSLSSTKEVWLQYDADGEGGND 1136
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/329 (10%), Positives = 79/329 (24%), Gaps = 4/329 (1%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G + + G N + ++ G + + +S+ G G + + G
Sbjct: 555 DKGYGNSAANLIEGRDGNDQLFGLDGDDTLTGGNGSDKLYGGLGSDSLDGGEGRNQLYGE 614
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
++ G D DG +G D+ ++ ++ D ++ + +
Sbjct: 615 DGDDTVLAGDGADKIDGGAGNDSLDGGGGRNQLYGEDGDDTVLAGDGSDKIYGGAGN-DS 673
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
L + S + + G D + G D+
Sbjct: 674 LNGGGGRNQLYGEDGDDTVLAGDSSDRIDGGAGNDSLDGGGGNNRVEGGLGNDVIITGSG 733
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
Y N S + G + ++ +
Sbjct: 734 RDLLYGGDGNDTLSAGDGYNKADGGLGDDLISGGSGRDQFKGGDGNDTIAAGDGYNKADG 793
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
+G D S ++ D + G + G + +
Sbjct: 794 GLGDDSISGGSGKDQLSGGDGDDTIAAGDGDNKADGGEGHDSITS---GSGKDKIKGGLG 850
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKD 552
+ + D +GKD
Sbjct: 851 NDTIAAGDGDNQVSGDDGDDSITSGSGKD 879
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 57/439 (12%), Positives = 111/439 (25%), Gaps = 47/439 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ G + + D +D G G ++ + + LG
Sbjct: 666 YGGAGNDSLNGGGGRNQLYGEDGDDTVLAGDSSDRIDGGAGNDSLDGGGGNNRVEGGLGN 725
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS--DIVAVQ 192
+ +G +YG D + + + D ++ G D +A
Sbjct: 726 DVIITGSGRDLLYGGDGNDTLSAGDGYNKADGGLGDDLISGGSGRDQFKGGDGNDTIAAG 785
Query: 193 KIYGAPKGSLGNNIYKIEV---QQKDSPFIQTIYDSGGDDLLDL--------------TL 235
Y G LG++ Q TI GD+ D +
Sbjct: 786 DGYNKADGGLGDDSISGGSGKDQLSGGDGDDTIAAGDGDNKADGGEGHDSITSGSGKDKI 845
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
GG+ N + + + G + + +I + + + G GND + +N G+
Sbjct: 846 KGGLGNDTIAAGDGDNQVSGDDGDDSITSGSGKDKIKGGLGNDTIAAGDGDNQISGDDGD 905
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
DV SG D +D LS
Sbjct: 906 DVITSGSGKDKI----------------------KGGLGEDTLSA------GGGDNKLDG 937
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
++ + + + G D+ E+ G D
Sbjct: 938 GDGNDVITSGSGSDKVQGGNGDDLIETGSGADNVNGGAGNDTILAGADADKVIGGDGGDS 997
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ +G D + A ++ + D G D
Sbjct: 998 LDGGDGDDKISAGNGDDTADGGDGADKINGGAGNDTIRGGSGDDMLDGSAGSDRLEGGAG 1057
Query: 476 EEGRFVTFDSYLYLGSYDD 494
+ D+ +++ + D
Sbjct: 1058 ADTLKGGADADVFVFASAD 1076
Score = 44.4 bits (103), Expect = 0.060, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 79/273 (28%), Gaps = 9/273 (3%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + ++ + D + G +I S + +I LG
Sbjct: 827 ADGGEGHDSITSGSGKDKIKGGLGNDTIAAGDGDNQVSGDDGDDSITSGSGKDKIKGGLG 886
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ +G + G D D S + + A G +
Sbjct: 887 NDTIAAGDGDNQISGDDGDDVITSGSGKDKIKGGLGEDTLSAGGGDNKLDGGDGNDVITS 946
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-----VKNYIDLNTE 248
G+ K GN + + + G+D + +
Sbjct: 947 GSGSDKVQGGN----GDDLIETGSGADNVNGGAGNDTILAGADADKVIGGDGGDSLDGGD 1002
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
I + T + + G +GND + G S +++ S+G+D +G +G DT
Sbjct: 1003 GDDKISAGNGDDTADGGDGADKINGGAGNDTIRGGSGDDMLDGSAGSDRLEGGAGADTLK 1062
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
A + ++ ++A + D+
Sbjct: 1063 GGADADVFVFASADDAGDILRDFRLGDGDALDI 1095
>gi|254471059|ref|ZP_05084462.1| secreted protease C [Pseudovibrio sp. JE062]
gi|211960201|gb|EEA95398.1| secreted protease C [Pseudovibrio sp. JE062]
Length = 592
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 89/379 (23%), Positives = 141/379 (37%), Gaps = 53/379 (13%)
Query: 36 TTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS---DIKFISSNN------ 86
+ + + L +S+V +++F + D + SN
Sbjct: 173 NNNGVEDTFAHVTDAQIAAIEGVLASYSEVANISFARVNPEGFTDDATILFSNYHSTTDG 232
Query: 87 --GYVCTPRYD--SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
Y P Y ++ + V + G+ +HE+GHA+GL HPG YN
Sbjct: 233 AGAYAYYPGSAEADAYEGDVWLNTNSVSTDELPTGSYSHFAVMHEVGHAVGLAHPGDYNA 292
Query: 143 G---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMD-ASFGYCATPMVSDIVAVQKIYGAP 198
G Y + D+ SVMSYF ++ + G+ T M DI+A+Q++YG
Sbjct: 293 GPGVRITYDDHAQFRQDTQQYSVMSYFDESNADSNLGYGGFPDTLMPLDILALQQLYGVN 352
Query: 199 KG-SLGNNIYKIEVQ-------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ +Y + P TI+D+GG+D +D++ G V I L S+
Sbjct: 353 TTTRADDTVYGYNSNAGGVYDFSEGMPSALTIWDAGGNDTIDMSGAGKVNQMISLIDGSF 412
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S++GG N+ IA + VIE+ +GS GND +IGN+A N +GND G+ G D
Sbjct: 413 SNVGGGLSNLAIAYNAVIENAIGSGGNDTIIGNAAGNTLTGKAGNDTLIGNGGKDKLI-- 470
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ D L L+ + +
Sbjct: 471 --------------------GGNGHDTLRG------GSGSDVLKGGAGDDTLDGGSGADK 504
Query: 371 LIQVIGQDVFESMKHFYEF 389
LI G D F
Sbjct: 505 LIAGAGDDTLTGGSGSDNF 523
>gi|238793278|ref|ZP_04636905.1| Metalloprotease [Yersinia intermedia ATCC 29909]
gi|238727446|gb|EEQ18973.1| Metalloprotease [Yersinia intermedia ATCC 29909]
Length = 404
Score = 178 bits (451), Expect = 3e-42, Method: Composition-based stats.
Identities = 90/388 (23%), Positives = 123/388 (31%), Gaps = 72/388 (18%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNN-------GYVCTPRYDSRYFMEINFDKADVWRYGIG 115
S V ++ F E +N GY P I +
Sbjct: 5 SDVANIKFIEAENDVVANIPITNALLEGSLGGYAYRPN--PDNLSPIFINAKIEENLAPT 62
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
+ +HE GHALGL H D + TSVMSY S
Sbjct: 63 QSNYGGRVFMHEFGHALGLEHTH-------------DSMGLTQKTSVMSYLSEFYSGAIY 109
Query: 176 SFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQT---------IYDS 225
+ +TP + DI+A+Q +YG +GN Y F T ++D+
Sbjct: 110 GNNFASTPQLHDILALQYLYGTNNRTRIGNTTYGFNSNSNRDYFTATHASDKLVFCVWDA 169
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG+D D + + I L +S IGG N++IA VIE+ + SG+D + GN +
Sbjct: 170 GGNDTFDFSGYHQNQ-RITLTKRGFSDIGGLRGNVSIADKVVIENAITGSGDDEINGNRS 228
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
NN G+D G G D F D LS
Sbjct: 229 NNTLNGGDGDDRLWGREGNDRLF----------------------GGRGNDRLSG----- 261
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYL 403
K L A + L G D + EGRDI +S
Sbjct: 262 ----------GKGDDFLSGGAGNDRLAGGSGDDRLFGGRGADRMKGGEGRDIFQYRNSRD 311
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGV 431
Y D F S +I G
Sbjct: 312 STQKYTDTIIDFTSGEDKIDLSFIMAGN 339
>gi|66046290|ref|YP_236131.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv.
syringae B728a]
gi|63256997|gb|AAY38093.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv.
syringae B728a]
Length = 535
Score = 177 bits (448), Expect = 6e-42, Method: Composition-based stats.
Identities = 104/480 (21%), Positives = 160/480 (33%), Gaps = 66/480 (13%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + ++ + + D L A+ AL WS V
Sbjct: 29 PFWLGDSSGTHLTYSFHKADSVYAT---DYSRSQEPGDAYSLTDAQAAAAKSALDAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFIS------SNNGYVCTPRY---DSRYFMEINFDKADVWRY 112
D+ F E DI+F + G P ++ N + AD
Sbjct: 86 ADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNVNAAD---- 141
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
KGT +HE GHALGL H + V D + + ++MSY
Sbjct: 142 -PAKGTDDYLTFMHETGHALGLKHSFEASQYNDVL---LDAKFEDARYTIMSYTNNYS-- 195
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
TPM+ DI A+Q IYGA G+++YK +TI+D+GG D +
Sbjct: 196 -----FKPTTPMLLDIAAMQFIYGANTHYHTGDDVYKW---APGQSVFETIWDAGGKDTI 247
Query: 232 DLTLIGGVKNYIDLNTESWSSIG--------------GYEKNMTIAQHTVIESVVGSSGN 277
D + I+LN +S+IG + IA IE+ +GS+ N
Sbjct: 248 DASNQ-EASVKINLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGAHIENAIGSAFN 306
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD- 336
D +IGN +NV G D G G DT+ L + + I +
Sbjct: 307 DTLIGNELDNVLNGRGGLDTMVGGLGNDTYVIDQAGELDLVQEKADQGIDTLKITYDNTS 366
Query: 337 -----------FLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L++ E + + + + L + L G D +
Sbjct: 367 PIAQVINLNAGTLANFENVHLKGEGAFTVLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQ 426
Query: 385 HFYEFGLSEGRD---ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
G D S + G D+ F S +G + + DAF
Sbjct: 427 GADIMTGGSGADRFVFNNLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTKALDAFS 486
>gi|298486731|ref|ZP_07004787.1| Ca2+-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298158598|gb|EFH99662.1| Ca2+-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 535
Score = 177 bits (448), Expect = 6e-42, Method: Composition-based stats.
Identities = 110/504 (21%), Positives = 165/504 (32%), Gaps = 89/504 (17%)
Query: 6 PVYTTERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQE 53
P + + LL +W + + Y + + D L
Sbjct: 14 PEGSPDDRVTSLLWGPFWLGDSTGTHLTYSFHTANSVYATDYSRSQEPSDAYSLTDAQAA 73
Query: 54 VARWALGEWSKVVDLTFEETSIH----SDIKFIS------SNNGYVCTPRY---DSRYFM 100
AR ALG WS V D+ F E DI+F + G P ++
Sbjct: 74 AARSALGAWSAVADIKFTEVQDTPDNVGDIRFGGFKSLQSTEYGQAYAPGTLGRSGDVWI 133
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
+ AD KGT +HE GHALGL H + V D + +
Sbjct: 134 GPKVNAAD-----PAKGTDDYLTFMHETGHALGLKHSFEASQYNDVL---LDAKFEDARY 185
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFI 219
++MSY TPM+ D+ A+Q IYGA GN++YK Q
Sbjct: 186 TIMSYTNNYS-------FKPTTPMLLDVAAMQFIYGANTSYHTGNDVYKWAPDQS---VF 235
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQH 265
+TI+D+GG D +D + I+LN +S+IG + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK-INLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAYG 294
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +GS+ ND +IGNS +NV G D G G DT+ L + N
Sbjct: 295 AHIENAIGSAFNDTLIGNSLDNVLDGRGGLDTMIGGLGNDTYVIDQAGELALVQEKANEG 354
Query: 326 IVYDANEHKQDF------------LSDVER----------LRFADQCIDSVNVKQRSILE 363
I + L++ E L D+ + ++L
Sbjct: 355 IDTLKITYDNTSPVATVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLIGNDANNVLF 414
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEF--------GLSEGRDITFDSYLYLGSYDDLRNVF 415
A + L+ +G D+ F G D+ D G +
Sbjct: 415 GGAGNDKLVGGLGADIMTGGSGADRFVFNDLAEMGKGHASDVITDFNSQQGDKLSFLKMD 474
Query: 416 GSDRGAAARHYITHGVKEGRNPDA 439
+ A + G E
Sbjct: 475 ANVDTKALDAFSFIGSGEFTGAGQ 498
>gi|209967239|ref|YP_002300154.1| Alkaline protease, putative [Rhodospirillum centenum SW]
gi|209960705|gb|ACJ01342.1| Alkaline protease, putative [Rhodospirillum centenum SW]
Length = 1518
Score = 177 bits (448), Expect = 7e-42, Method: Composition-based stats.
Identities = 87/429 (20%), Positives = 138/429 (32%), Gaps = 80/429 (18%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFD---------ITELNPNAQEVARWAL 59
T + D LL + W + I Y + + + L Q R AL
Sbjct: 22 TGDGNVDTLLYGRKWGSNSITYSFPADASDLSDYPAGTAIDSSYFSALTAAQQTAVRAAL 81
Query: 60 GEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG---- 115
WS+V L+F + + + + +P + ++ D+ + +G
Sbjct: 82 NAWSEVSGLSFTQAATPAQGDIRLY---WYLSPDNLTARIVDYPSDQPEGGDLQLGSAAG 138
Query: 116 -----KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
G+ LHE+GHALGL HP G+P D+ S ++ P +
Sbjct: 139 VASWDPGSYAYFLLLHELGHALGLKHPHDSVNGFPAADSSQDWVGLSVMSYRSQAGGPVE 198
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
A+ Y PM++DI A+Q +YG + G+ Y + T++D GGDD
Sbjct: 199 GYSLAAGSYPFRPMLNDIAAIQALYGPNWSTNAGDTTYSFDPTAP--VIFMTLWDGGGDD 256
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH------------------TVIESV 271
+ + L W S+GG + + ++IE+
Sbjct: 257 TYNFASYATDL-TVSLLPGEWISLGGQQAILDTGSGVRAPGNIANPYLYQGDQRSLIENA 315
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G SG+D + GN A+N GND G G DT
Sbjct: 316 IGGSGHDRITGNVADNRLEGRDGNDTLTGGDGNDTLI----------------------- 352
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ + L A + L G D E F
Sbjct: 353 --------------GGNGNDSLLGGNGSDSLSGGADNDTLEGGAGDDTLEGGSGADVFVF 398
Query: 392 SEGRDITFD 400
G D D
Sbjct: 399 QSGVDAGID 407
Score = 122 bits (305), Expect = 3e-25, Method: Composition-based stats.
Identities = 64/297 (21%), Positives = 102/297 (34%), Gaps = 27/297 (9%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G NI +V + G + + + + YI L + ++ G + T
Sbjct: 1224 SGTNIELRDVDYAVVTGSVFVTGGTGSN---VVIGDDARQYIRLGPD-DDTLRGGGGDDT 1279
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G GND V G + +G+D DG SG+D A +
Sbjct: 1280 VGSGEGRDLLYGDEGNDSVFGGEGYDRLSGGAGDDTIDGGSGVDVVRIEAARSAVTLEAT 1339
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCI------------DSVNVKQRSILEYTASYE 369
+ D S VE +RF DQ + +
Sbjct: 1340 GPWGVRLSGAATGTDVASGVELIRFDDQVVYVTLPVRFEAVQPDGGGAFDEAFYLAQWAD 1399
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDL-RNVFGSDRGAAARHY 426
V ++H+ FG +EGRD T FD YL + D+ V + HY
Sbjct: 1400 VRAAVADGRFQSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAVEAGQFHSGYEHY 1459
Query: 427 ITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ G +E R+P A F Y+ + D+ +A D H+ +G E R T
Sbjct: 1460 LAFGWREDRDPSAWFDLSAYLQRNSDVADAGIDP-------LRHWLVWGIGEDRIAT 1509
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/316 (14%), Positives = 89/316 (28%), Gaps = 32/316 (10%)
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D + ++ + +++ D D + LR + + R +L
Sbjct: 1231 RDVDYAVVTGSVFVTGGTGSNVVIGDDARQYIRLGPDDDTLRGGGGDDTVGSGEGRDLLY 1290
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ + G D G D+ + + A
Sbjct: 1291 GDEGNDSVFGGEGYDRLSGGAGDDTIDGGSGVDVVR-----------IEAARSAVTLEAT 1339
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ + + + +D + V D F
Sbjct: 1340 GPWGVR-LSGAATGTDVASGVELIRFDDQVVYVTLPVRFEAVQPDGGGA----------F 1388
Query: 484 DSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
D YL + D+R + HY+ G EGR+P F Y+A D+ A
Sbjct: 1389 DEAFYLAQWADVRAAVADGRFQSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAV- 1447
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+G +H+ FG+ E R + F+ YL D+ + +H++ G+
Sbjct: 1448 -EAGQFHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNSDVADA----GIDPLRHWLVWGI 1502
Query: 600 KEGRALGISGMQFKSV 615
E R +
Sbjct: 1503 GEDRIATAADTGLWLA 1518
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 80/294 (27%), Gaps = 36/294 (12%)
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVER----LRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + +++E + +++ + + +
Sbjct: 1204 TSTDTSGMVTAVVIDGRSLPSGTNIELRDVDYAVVTGSVFVTGGTGSNVVIGDDARQYIR 1263
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
D G EGRD+ Y G
Sbjct: 1264 LGPDDDTLRGGGGDDTVGSGEGRDLL---------------------------YGDEGND 1296
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ + L A + + ++ + + +
Sbjct: 1297 SVFGGEGYDRLSGGAGDDTIDGGSGVDVVRIEAARSAVTLEATGPWGVRLSGAATGTDVA 1356
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ + D+ + + AF Y+A D+ A AD Q+G +
Sbjct: 1357 SGVELIRFDDQVVYVTLPVRFEAVQPDGGGAFDEAFYLAQWADVRAAVAD--GRFQSGLE 1414
Query: 553 HFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRS-AAAQHYITHGMKEGR 603
H+ FG EGR T F+ + YL + D+ + + + +HY+ G +E R
Sbjct: 1415 HYLAFGQAEGRDPTPLFDEEAYLARWADVRVAVEAGQFHSGYEHYLAFGWREDR 1468
>gi|257485207|ref|ZP_05639248.1| metalloprotease, putative [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|330987388|gb|EGH85491.1| metalloprotease [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331010894|gb|EGH90950.1| metalloprotease [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 535
Score = 177 bits (448), Expect = 7e-42, Method: Composition-based stats.
Identities = 110/504 (21%), Positives = 164/504 (32%), Gaps = 89/504 (17%)
Query: 6 PVYTTERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQE 53
P + + LL +W + + Y + + D L
Sbjct: 14 PEGSPDDRVTSLLWGPFWLGDSTGTHLTYSFHTANSVYATDYSRSQEPSDAYSLTDAQAA 73
Query: 54 VARWALGEWSKVVDLTFEETSIH----SDIKFIS------SNNGYVCTPRY---DSRYFM 100
AR ALG WS V D+ F E DI+F + G P ++
Sbjct: 74 AARSALGAWSAVADIKFTEVQDTPDNVGDIRFGGFKSLQSTEYGQAYAPGTLGRSGDVWI 133
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
+ AD KGT +HE GHALGL H + V D + +
Sbjct: 134 GPKVNAAD-----PAKGTDDYLTFMHETGHALGLKHSFEASQYNDVL---LDAKFEDARY 185
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFI 219
++MSY TPM+ D+ A+Q IYGA GN++YK Q
Sbjct: 186 TIMSYTNNYS-------FKPTTPMLLDVAAMQFIYGANTSYHTGNDVYKWAPDQS---VF 235
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQH 265
+TI+D+GG D +D + I+LN +S+IG + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK-INLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAYG 294
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +GS+ ND +IGNS +NV G D G G DT+ L + N
Sbjct: 295 AHIENAIGSAFNDTLIGNSLDNVLDGRGGLDTMIGGLGNDTYVIDQAGELALVQEKANEG 354
Query: 326 IVYDANEHKQDF------------LSDVER----------LRFADQCIDSVNVKQRSILE 363
I + L++ E L D+ ++L
Sbjct: 355 IDTLKITYDNTSPVATVIDLNAEPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVLF 414
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEF--------GLSEGRDITFDSYLYLGSYDDLRNVF 415
A + L+ +G D+ F G D+ D G +
Sbjct: 415 GGAGNDKLVGGLGADIMTGGSGADRFVFNDLAEMGKGHASDVITDFNSQQGDKLSFLKMD 474
Query: 416 GSDRGAAARHYITHGVKEGRNPDA 439
+ A + G E
Sbjct: 475 ANVDTKALDAFSFIGSGEFTGAGQ 498
>gi|114571037|ref|YP_757717.1| serralysin [Maricaulis maris MCS10]
gi|114341499|gb|ABI66779.1| Serralysin [Maricaulis maris MCS10]
Length = 1631
Score = 176 bits (447), Expect = 7e-42, Method: Composition-based stats.
Identities = 113/356 (31%), Positives = 161/356 (45%), Gaps = 29/356 (8%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFIS 83
SN F + D ++ +IT L Q +AR AL W + ++F E + +I F
Sbjct: 1103 SNGFGGLQWDRSAGDTITVNITALTVAGQTLARAALQLWEDITGISFTEVATGGEITFDD 1162
Query: 84 SNNGYVCTPRYDSRYFM---EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
G P S F+ +N A + YG +HEIGHALGL H G Y
Sbjct: 1163 DEEGAFAGPDATSGGFITAASVNVGTAWLDTYGTNIDGYSFQTYIHEIGHALGLGHGGPY 1222
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQ-DSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
+ G Y VD Y NDS+ SVMSYF ++ +DA FGY P V+DI+AV +YG
Sbjct: 1223 D-GSADYAVDAIYLNDSWQASVMSYFSQNENTFIDADFGYVIGPQVADIIAVLDMYGGST 1281
Query: 200 -GSLGNNIYKIEVQQKD---------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
G+ Y + +P TI+D+GG D +D + + + DL ++
Sbjct: 1282 STRGGDTTYGYNSTAGNVIFDATAHSNPVSFTIFDTGGTDTMDYSGSSANQTF-DLREQA 1340
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES---------SGNDVFDG 300
+S + G E N+ IA+ TVIE+ +G +GND+ IGN ANNV G+DVFDG
Sbjct: 1341 YSDLMGREGNVGIARGTVIENAIGGAGNDIFIGNDANNVLTGGGGGDRFYASGGSDVFDG 1400
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVY----DANEHKQDFLSDVERLRFADQCID 352
SG DT + S Y + + V L VE + + +
Sbjct: 1401 GSGSDTVVFSGASTDYSLTTNGSGNTVVTDNRTGAPDGVVELISVETIVYDGGTSN 1456
>gi|330890304|gb|EGH22965.1| metalloprotease [Pseudomonas syringae pv. mori str. 301020]
Length = 535
Score = 176 bits (446), Expect = 1e-41, Method: Composition-based stats.
Identities = 110/492 (22%), Positives = 163/492 (33%), Gaps = 80/492 (16%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P ++ + HL + Y D + + D L AR ALG WS V
Sbjct: 29 PFWSGDSTGTHLT--YSFHTANSVYATD-YSRSQEPSDAYSLTDAQAAAARSALGAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFIS------SNNGYVCTPRY---DSRYFMEINFDKADVWRY 112
D+ F E DI+F + G P ++ + AD
Sbjct: 86 ADIKFTEVQDTPDNVGDIRFGGFKSLQSTEYGQAYAPGTLGRSGDVWIGPKVNAAD---- 141
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
KGT +HE GHALGL H + V D + + ++MSY
Sbjct: 142 -PAKGTDDYLTFMHETGHALGLKHSFEASQYNDVL---LDAKFEDARYTIMSYTNNYS-- 195
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
TPM+ D+ A+Q IYGA GN++YK Q +TI+D+GG D +
Sbjct: 196 -----FKPTTPMLLDVAAMQFIYGANTSYHTGNDVYKWAPDQS---VFETIWDAGGKDTI 247
Query: 232 DLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSSGN 277
D + I+LN +S+IG + IA IE+ +GS+ N
Sbjct: 248 DASNQASFVK-INLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAYGAHIENAIGSAFN 306
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D +IGNS +NV G D G G DT+ L + N I +
Sbjct: 307 DTLIGNSLDNVLDGRGGLDTMIGGLGNDTYVIDQAGELALVQEKANEGIDTLKITYDNTS 366
Query: 338 ------------LSDVER----------LRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
L++ E L D+ ++L A + L+ +
Sbjct: 367 PVATVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVLFGGAGNDKLVGGL 426
Query: 376 GQDVFESMKHFYEF--------GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
G D+ F G D+ D G + + A +
Sbjct: 427 GADIMTGGSGADRFVFNDLAEMGKGHASDVITDFNSQQGDKLSFLKMDANVDTKALDAFS 486
Query: 428 THGVKEGRNPDA 439
G E
Sbjct: 487 FIGSGEFTGAGQ 498
>gi|71733556|ref|YP_274399.1| metalloprotease [Pseudomonas syringae pv. phaseolicola 1448A]
gi|289627442|ref|ZP_06460396.1| metalloprotease, putative [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|71554109|gb|AAZ33320.1| metalloprotease, putative [Pseudomonas syringae pv. phaseolicola
1448A]
gi|320324669|gb|EFW80743.1| metalloprotease, putative [Pseudomonas syringae pv. glycinea str.
B076]
gi|330866689|gb|EGH01398.1| metalloprotease [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 535
Score = 176 bits (445), Expect = 1e-41, Method: Composition-based stats.
Identities = 110/504 (21%), Positives = 164/504 (32%), Gaps = 89/504 (17%)
Query: 6 PVYTTERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQE 53
P + + LL +W + + Y + + D L
Sbjct: 14 PEGSPDDRVTSLLWGPFWLGDSTGTHLTYSFHTANSVYATDYSRSQEPSDAYSLTDAQAA 73
Query: 54 VARWALGEWSKVVDLTFEETSIH----SDIKFIS------SNNGYVCTPRY---DSRYFM 100
AR ALG WS V D+ F E DI+F + G P ++
Sbjct: 74 AARSALGAWSAVADIKFTEVQDTPDNVGDIRFGGFKSLQSTEYGQAYAPGTLGRSGDVWI 133
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
+ AD KGT +HE GHALGL H + V D + +
Sbjct: 134 GPKVNAAD-----PAKGTDDYLTFMHETGHALGLKHSFEASQYNDVL---LDAKFEDARY 185
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFI 219
++MSY TPM+ D+ A+Q IYGA GN++YK Q
Sbjct: 186 TIMSYTNNYS-------FKPTTPMLLDVAAMQFIYGANTSYHTGNDVYKWAPDQS---VF 235
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQH 265
+TI+D+GG D +D + I+LN +S+IG + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK-INLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAYG 294
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +GS+ ND +IGNS +NV G D G G DT+ L + N
Sbjct: 295 AHIENAIGSAFNDTLIGNSLDNVLDGRGGLDTMIGGLGNDTYVIDQAGELALVQEKANEG 354
Query: 326 IVYDANEHKQDF------------LSDVER----------LRFADQCIDSVNVKQRSILE 363
I + L++ E L D+ ++L
Sbjct: 355 IDTLKITYDNTSPVATVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVLF 414
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEF--------GLSEGRDITFDSYLYLGSYDDLRNVF 415
A + L+ +G D+ F G D+ D G +
Sbjct: 415 GGAGNDKLVGGLGADIMTGGSGADRFVFNDLAEMGKGHASDVITDFNSQQGDKLSFLKMD 474
Query: 416 GSDRGAAARHYITHGVKEGRNPDA 439
+ A + G E
Sbjct: 475 ANVDTKALDAFSFIGSGEFTGAGQ 498
>gi|318607889|emb|CBY29387.1| metalloprotease [Yersinia enterocolitica subsp. palearctica Y11]
Length = 413
Score = 176 bits (445), Expect = 1e-41, Method: Composition-based stats.
Identities = 75/360 (20%), Positives = 138/360 (38%), Gaps = 38/360 (10%)
Query: 24 SNYFIRYKPDVLTTHRLSFDI--TELNPNAQEVARWALGEWSKVVDLTFEETSIHS---- 77
+ F + P ++L DI + N A A+ S V ++ F E +
Sbjct: 38 TFSFTQDIPKKYHYYKLKDDIPTSPFNKTQIYQAGIAMQSISDVANIKFVEVNTTRANIP 97
Query: 78 --DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ F + + + + + + +HEI HA+GL
Sbjct: 98 MVNAHFYNPTHVAGYGYYPNKNNLSPVCINADIQEDITPSHLQYGNSVIVHEILHAIGLQ 157
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
H + S+MSY + S + + Y + P + DI A+Q +Y
Sbjct: 158 HTHDTA-------------GLTQQESIMSYSSEKHSGGNYAEYYVSMPQLYDIAALQYLY 204
Query: 196 GAP-KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G GN+ Y I I+D+GG D LD + + I+L S+S +G
Sbjct: 205 GPNMNTRTGNDTYTYSSDTP----IFCIWDAGGIDTLDFSDQTQDQ-VINLTAGSFSDVG 259
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N++IA IE+ +G SG+D +IGN+ +N+ G D G +G + F Y+ +
Sbjct: 260 GLKANISIAFGVSIENAIGGSGDDKIIGNNTDNILTGGFGADEIWGGNGSNIFRYHKTTD 319
Query: 315 LYKIYRFENAIIVYDANEHKQDF---------LSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + +++ + K D ++ V++ F+ + + + Y
Sbjct: 320 SNTTS--ADTLHDFNSEKDKIDLSPIIYSNEDIALVDKFNFSGRTEIIRKYDNTNDITYL 377
>gi|307826097|ref|ZP_07656309.1| glycosyl transferase family 2 [Methylobacter tundripaludum SV96]
gi|307732835|gb|EFO03700.1| glycosyl transferase family 2 [Methylobacter tundripaludum SV96]
Length = 1802
Score = 175 bits (444), Expect = 2e-41, Method: Composition-based stats.
Identities = 66/267 (24%), Positives = 103/267 (38%), Gaps = 39/267 (14%)
Query: 346 FADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSY 402
+ ++ N Y D + G + H+ G +EGR+ FDS
Sbjct: 588 LSAGTVEGRNPNLWFDCCWYLEQNPD-VAAAGVNPL---AHYLSKGAAEGRNPNPWFDSR 643
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPD 461
YL D+ HY++ G EGRNP+ F + Y+ + D+ A +
Sbjct: 644 WYLEQNPDVAAA----GLNPLAHYLSRGAAEGRNPNPLFDSRWYLEKNPDVAEAEINP-- 697
Query: 462 LVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
H+ + G EGR + FDS YL D+ + HY++ G EGR
Sbjct: 698 -----LVHYLSNGAIEGRNPSPLFDSRWYLEQNPDVAAAGLN----PLAHYLSRGAAEGR 748
Query: 520 NPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
NP+ F + Y+ + D+ A P + H+ + G EGR+ F+ YL
Sbjct: 749 NPNPLFDSRWYLEQNPDVAAA-GLNPLV------HYLSKGAAEGRNPNPWFDSRWYLEQN 801
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGR 603
D+ H+I G +EGR
Sbjct: 802 PDVAEA----GLNPLVHFIRSGAEEGR 824
Score = 173 bits (438), Expect = 8e-41, Method: Composition-based stats.
Identities = 66/284 (23%), Positives = 103/284 (36%), Gaps = 43/284 (15%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLR 412
+ S + + + H+ G EGR+ FD YL D+
Sbjct: 561 SPLFDSRWYLEQNPDVAAAG-----LNPLTHYLSAGTVEGRNPNLWFDCCWYLEQNPDVA 615
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
HY++ G EGRNP+ F + Y+ + D+ A + H+
Sbjct: 616 AA----GVNPLAHYLSKGAAEGRNPNPWFDSRWYLEQNPDVAAAGLNP-------LAHYL 664
Query: 472 NFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALE 528
+ G EGR FDS YL D+ HY+++G EGRNP F +
Sbjct: 665 SRGAAEGRNPNPLFDSRWYLEKNPDVAEA----EINPLVHYLSNGAIEGRNPSPLFDSRW 720
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSD 586
Y+ + D+ A P H+ + G EGR+ F+ YL D+
Sbjct: 721 YLEQNPDVAAA-GLNPL------AHYLSRGAAEGRNPNPLFDSRWYLEQNPDVAAA---- 769
Query: 587 RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSL 630
HY++ G EGR + + E++ D A+ L
Sbjct: 770 GLNPLVHYLSKGAAEGR----NPNPWFDSRWYLEQNPDVAEAGL 809
Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats.
Identities = 68/284 (23%), Positives = 104/284 (36%), Gaps = 43/284 (15%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLR 412
N S + + I + H+ EGR+ FDS YL D+
Sbjct: 523 NFLFDSRWYLEQNPDVAEAEI-----NPLVHYLSNAAIEGRNPSPLFDSRWYLEQNPDVA 577
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
HY++ G EGRNP+ F Y+ + D+ A + H+
Sbjct: 578 AA----GLNPLTHYLSAGTVEGRNPNLWFDCCWYLEQNPDVAAAGVNP-------LAHYL 626
Query: 472 NFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALE 528
+ G EGR FDS YL D+ + HY++ G EGRNP+ F +
Sbjct: 627 SKGAAEGRNPNPWFDSRWYLEQNPDVAAAGLN----PLAHYLSRGAAEGRNPNPLFDSRW 682
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSD 586
Y+ + D+ A P + H+ + G EGR+ + F+ YL D+
Sbjct: 683 YLEKNPDVAEAE-INPLV------HYLSNGAIEGRNPSPLFDSRWYLEQNPDVAAA---- 731
Query: 587 RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSL 630
HY++ G EGR + E++ D A L
Sbjct: 732 GLNPLAHYLSRGAAEGR----NPNPLFDSRWYLEQNPDVAAAGL 771
Score = 168 bits (424), Expect = 4e-39, Method: Composition-based stats.
Identities = 69/292 (23%), Positives = 106/292 (36%), Gaps = 42/292 (14%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLY 404
A+Q Y D + G + H+ G EGR+ F+S Y
Sbjct: 438 AEQTELITGSNVFISAWYLEQNPD-VTEAGINSL---AHYLSKGAVEGRNPNPLFNSRWY 493
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLV 463
L D+ HY++ G EGRNP+ F + Y+ + D+ A +
Sbjct: 494 LEQNPDVAEA----GINPLVHYLSKGAAEGRNPNFLFDSRWYLEQNPDVAEAEINP---- 545
Query: 464 QVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
H+ + EGR + FDS YL D+ + HY++ G EGRNP
Sbjct: 546 ---LVHYLSNAAIEGRNPSPLFDSRWYLEQNPDVAAAGLN----PLTHYLSAGTVEGRNP 598
Query: 522 DA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDD 578
+ F Y+ + D+ A P H+ + G EGR+ F+ YL D
Sbjct: 599 NLWFDCCWYLEQNPDVAAA-GVNPL------AHYLSKGAAEGRNPNPWFDSRWYLEQNPD 651
Query: 579 LWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSL 630
+ HY++ G EGR + EK+ D A+ +
Sbjct: 652 VAAA----GLNPLAHYLSRGAAEGR----NPNPLFDSRWYLEKNPDVAEAEI 695
Score = 139 bits (349), Expect = 2e-30, Method: Composition-based stats.
Identities = 57/213 (26%), Positives = 83/213 (38%), Gaps = 32/213 (15%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFG 416
Y D + G + H+ G +EGR+ FDS YL D+
Sbjct: 640 FDSRWYLEQNPD-VAAAGLNPL---AHYLSRGAAEGRNPNPLFDSRWYLEKNPDVAEAE- 694
Query: 417 SDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
HY+++G EGRNP F + Y+ + D+ A + H+ + G
Sbjct: 695 ---INPLVHYLSNGAIEGRNPSPLFDSRWYLEQNPDVAAAGLNP-------LAHYLSRGA 744
Query: 476 EEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIAS 532
EGR FDS YL D+ + HY++ G EGRNP+ F + Y+
Sbjct: 745 AEGRNPNPLFDSRWYLEQNPDVAAAGLN----PLVHYLSKGAAEGRNPNPWFDSRWYLEQ 800
Query: 533 HEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
+ D+ A P + HF G EEGR
Sbjct: 801 NPDVAEA-GLNPLV------HFIRSGAEEGRQP 826
>gi|320328779|gb|EFW84778.1| metalloprotease, putative [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330881974|gb|EGH16123.1| metalloprotease [Pseudomonas syringae pv. glycinea str. race 4]
Length = 535
Score = 175 bits (443), Expect = 2e-41, Method: Composition-based stats.
Identities = 110/492 (22%), Positives = 163/492 (33%), Gaps = 75/492 (15%)
Query: 6 PVYTTERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQE 53
P + + LL +W + + Y + + D L
Sbjct: 14 PEGSPDDRVTSLLWGPFWLGDSTGTHLTYSFHTANSVYATDYSRSQEPSDAYSLTDAQAA 73
Query: 54 VARWALGEWSKVVDLTFEETSIH----SDIKFIS------SNNGYVCTPRY---DSRYFM 100
AR ALG WS V D+ F E DI+F + G P ++
Sbjct: 74 AARSALGAWSAVADIKFTEVQDTPDNVGDIRFGGFKSLQSTEYGQAYAPGTLGRSGDVWI 133
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
+ AD KGT +HE GHALGL H + V D + +
Sbjct: 134 GPKVNAAD-----PAKGTDDYLTFMHETGHALGLKHSFEASQYNDVL---LDAKFEDARY 185
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFI 219
++MSY TPM+ D+ A+Q IYGA GN++YK Q
Sbjct: 186 TIMSYTNNYS-------FKPTTPMLLDVAAMQFIYGANTSYHTGNDVYKWAPDQS---VF 235
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQH 265
+TI+D+GG D +D + I+LN +S+IG + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK-INLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAYG 294
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +GS+ ND +IGNS +NV G D G G DT+ L + N
Sbjct: 295 AHIENAIGSAFNDTLIGNSLDNVLDGRGGLDTMIGGLGNDTYVIDQAGELALVQEKANEG 354
Query: 326 IVYDANEHKQDF------------LSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLI 372
I + L++ E + + + + L + L
Sbjct: 355 IDTLKITYDNTSPVATVIDLDAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVLF 414
Query: 373 QVIGQDVFESMKHFYEFGLSEGRD-ITFDSYLYLGSYD--DLRNVFGSDRGAAARHYITH 429
G D G D F+ +G D+ F S G
Sbjct: 415 GGAGNDKLVGGLGADIMTGGSGADRFVFNDLAEMGKGHASDVITDFNSQHGDKLSFLKMD 474
Query: 430 GVKEGRNPDAFK 441
+ + DAF
Sbjct: 475 ANVDTKALDAFS 486
>gi|330897915|gb|EGH29334.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 535
Score = 175 bits (443), Expect = 3e-41, Method: Composition-based stats.
Identities = 102/480 (21%), Positives = 160/480 (33%), Gaps = 66/480 (13%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + ++ + + D L A+ AL WS V
Sbjct: 29 PFWLGDSSGTHLTYSFHRADSVYAT---DYSRSQEPGDAYSLTDAQAAAAKSALDAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFIS------SNNGYVCTPRY---DSRYFMEINFDKADVWRY 112
D+ F E DI+F + G P ++ N + AD
Sbjct: 86 ADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNVNAAD---- 141
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
KGT +HE GHALGL H + V D + + ++MSY
Sbjct: 142 -PAKGTDDYLTFMHETGHALGLKHSFEASQYNDVL---LDAKFEDARYTIMSYTNNYS-- 195
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
TPM+ D+ A+Q IYGA G+++YK +TI+D+GG D +
Sbjct: 196 -----FKPTTPMLLDVAAMQFIYGANTHYHTGDDVYKW---APGQSVFETIWDAGGKDTI 247
Query: 232 DLTLIGGVKNYIDLNTESWSSIG--------------GYEKNMTIAQHTVIESVVGSSGN 277
D + I+LN +S+IG + IA IE+ +GS+ N
Sbjct: 248 DASNQ-EASVKINLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGAHIENAIGSAFN 306
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD- 336
D +IGN +NV G D G G DT+ L + + + +
Sbjct: 307 DTLIGNELDNVLNGRGGLDTMIGGLGNDTYVIDQAGELDLVQEKADQGVDTLKITYDNTS 366
Query: 337 -----------FLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L++ E + + + + L + L G D +
Sbjct: 367 PIAQVINLNAGTLANFENVHLKGEGAFTVLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQ 426
Query: 385 HFYEFGLSEGRD---ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
G D S + G D+ F S +G + + DAF
Sbjct: 427 GADIMTGGSGADRFVFNNLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTKALDAFS 486
>gi|332163392|ref|YP_004299969.1| Peptidase M10 serralysin [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325667622|gb|ADZ44266.1| Peptidase M10 serralysin [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862188|emb|CBX72350.1| secreted protease C [Yersinia enterocolitica W22703]
Length = 413
Score = 175 bits (443), Expect = 3e-41, Method: Composition-based stats.
Identities = 75/360 (20%), Positives = 138/360 (38%), Gaps = 38/360 (10%)
Query: 24 SNYFIRYKPDVLTTHRLSFDI--TELNPNAQEVARWALGEWSKVVDLTFEETSIHS---- 77
+ F + P ++L DI + N A A+ S V ++ F E +
Sbjct: 38 TFSFTQDIPKKYHYYKLKDDIPTSPFNKTQIYQAGIAMQSISDVTNIKFVEVNTTRANIP 97
Query: 78 --DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ F + + + + + + +HEI HA+GL
Sbjct: 98 MVNAHFYNPTHVAGYGYYPNKNNLSPVCINADIQEDITPSHLQYGNSVIVHEILHAIGLQ 157
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
H + S+MSY + S + + Y + P + DI A+Q +Y
Sbjct: 158 HTHDTA-------------GLTQQESIMSYSSEKHSGGNYAEYYVSMPQLYDIAALQYLY 204
Query: 196 GAP-KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G GN+ Y I I+D+GG D LD + + I+L S+S +G
Sbjct: 205 GPNMNTRTGNDTYTYSSDTP----IFCIWDAGGIDTLDFSDQTQDQ-VINLTAGSFSDVG 259
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N++IA IE+ +G SG+D +IGN+ +N+ G D G +G + F Y+ +
Sbjct: 260 GLKANISIAFGVSIENAIGGSGDDKIIGNNTDNILTGGFGADEIWGGNGSNIFRYHKTTD 319
Query: 315 LYKIYRFENAIIVYDANEHKQDF---------LSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + +++ + K D ++ V++ F+ + + + Y
Sbjct: 320 SNTTS--ADTLHDFNSEKDKIDLSPIIYSNEDIALVDKFNFSGRTEIIRKYDNTNDITYL 377
>gi|240950084|ref|ZP_04754384.1| calcium-binding domain-containing protein [Actinobacillus minor
NM305]
gi|240295433|gb|EER46192.1| calcium-binding domain-containing protein [Actinobacillus minor
NM305]
Length = 1762
Score = 174 bits (442), Expect = 3e-41, Method: Composition-based stats.
Identities = 86/439 (19%), Positives = 144/439 (32%), Gaps = 87/439 (19%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSD----IKFISSNNGYVCTPRYDSRYFMEINFDKA 107
+ V R A S ++ F E+ I D + + S NG R I ++
Sbjct: 1276 KAVFRDAYAILSSYTNIQFVESKISGDRDTFVHYASMTNGSAAVARNGG----HITWNAG 1331
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
W+ L + ALHEI H LG++H + + P + + ++ S++SY
Sbjct: 1332 SSWKGWGTD--YLYYTALHEIEHTLGMVHTNAGDI--PTFKENGYGNENTAEFSIISYDR 1387
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI-EVQQKDSPFIQTIYDS 225
+ D + D+ + +G G+++Y S + I+D
Sbjct: 1388 YVN---DNLYLSLRDLRPYDLAYLHYRFGVNPNARAGDDVYSFANYNTYASDGGRYIWDG 1444
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIG------------------------------- 254
G D D + Y++LN SWS +G
Sbjct: 1445 NGVDTFDASKEKQGV-YVNLNPGSWSYVGEERERNFLVKNINSTQQDAHQYFDLPEKAVI 1503
Query: 255 ----------------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ I Q T IE+++GS+ ND +IGN+A+N F +GND
Sbjct: 1504 DSGNGKEEPLKISDVEYTSGQVYIGQGTQIENLIGSNHNDTLIGNAADNNIFGGAGNDKL 1563
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENA---------IIVYDANEHKQDFL---------SD 340
+G +G D + + I+ +A D + +
Sbjct: 1564 EGGAGND--YLNGGLGEDTMIGGLGNDIYLVDNTKDIIVEAKNEGIDTVYSTVDYRLSEN 1621
Query: 341 VERLRFADQCI-DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
VE L ++ + +IL L G D F EG D F
Sbjct: 1622 VENLVLIGNTAKEAYGNELDNILTANNIGNTLNGGAGNDRLIGGLGADIFIGGEGAD-HF 1680
Query: 400 DSYLYLGSYDDLRNVFGSD 418
L D+ F ++
Sbjct: 1681 VFNTTLNGNVDIIKDFNTE 1699
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 43/136 (31%), Gaps = 11/136 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK--------NM 260
T+ G+D+ + ++ E ++ N+
Sbjct: 1568 GNDYLNGGLGEDTMIGGLGNDIYLVDN--TKDIIVEAKNEGIDTVYSTVDYRLSENVENL 1625
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ +T E G+ ++++ N+ N +GND G G D F + +
Sbjct: 1626 VLIGNTAKE-AYGNELDNILTANNIGNTLNGGAGNDRLIGGLGADIFIGGEGADHFVFNT 1684
Query: 321 FENAIIVYDANEHKQD 336
N + + + +D
Sbjct: 1685 TLNGNVDIIKDFNTED 1700
>gi|289648029|ref|ZP_06479372.1| metalloprotease, putative [Pseudomonas syringae pv. aesculi str.
2250]
Length = 535
Score = 174 bits (441), Expect = 4e-41, Method: Composition-based stats.
Identities = 109/504 (21%), Positives = 164/504 (32%), Gaps = 89/504 (17%)
Query: 6 PVYTTERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQE 53
P + + LL +W + + Y + + D L
Sbjct: 14 PEGSPDDRVTSLLWGPFWLGDSTGTHLTYSFHTANSVYATDYSRSQEPSDAYSLTDAQAA 73
Query: 54 VARWALGEWSKVVDLTFEETSIH----SDIKFIS------SNNGYVCTPRY---DSRYFM 100
AR ALG WS V D+ F E DI+F + G P ++
Sbjct: 74 AARSALGAWSAVADIKFTEVQDTPDNVGDIRFGGFKSLQSTEYGQAYAPGTLGRSGDVWI 133
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
+ AD KGT +HE GHALGL H + V D + +
Sbjct: 134 GPKVNAAD-----PAKGTDDYLTFMHETGHALGLKHSFEASQYNDVL---LDAKFEDARY 185
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFI 219
++MSY TPM+ D+ A+Q IYGA GN++YK Q
Sbjct: 186 TIMSYTNNYS-------FKPTTPMLLDVAAMQFIYGANTSYHTGNDVYKWAPDQS---VF 235
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQH 265
+TI+D+GG D +D + I+LN +S+IG + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK-INLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAYG 294
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +GS+ ND +IGNS +NV G D G G D++ L + N
Sbjct: 295 AHIENAIGSAFNDTLIGNSLDNVLDGRGGLDTMIGGLGNDSYVIDQAGELALVQEKANEG 354
Query: 326 IVYDANEHKQDF------------LSDVER----------LRFADQCIDSVNVKQRSILE 363
I + L++ E L D+ ++L
Sbjct: 355 IDTLKITYDNTSPVATVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVLF 414
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEF--------GLSEGRDITFDSYLYLGSYDDLRNVF 415
A + L+ +G D+ F G D+ D G +
Sbjct: 415 GGAGNDKLVGGLGADIMTGGSGADRFVFNDLAEMGKGHASDVITDFNSQQGDKLSFLKMD 474
Query: 416 GSDRGAAARHYITHGVKEGRNPDA 439
+ A + G E
Sbjct: 475 ANVDTKALDAFSFIGSGEFTGAGQ 498
>gi|330939111|gb|EGH42542.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330980802|gb|EGH78905.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 535
Score = 174 bits (441), Expect = 4e-41, Method: Composition-based stats.
Identities = 102/480 (21%), Positives = 160/480 (33%), Gaps = 66/480 (13%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + ++ + + D L A+ AL WS V
Sbjct: 29 PFWLGDSSGTHLTYSFHRADSVYAT---DYSRSQEPGDAYSLTDAQAAAAKSALDAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFIS------SNNGYVCTPRY---DSRYFMEINFDKADVWRY 112
D+ F E DI+F + G P ++ N + AD
Sbjct: 86 ADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNVNAAD---- 141
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
KGT +HE GHALGL H + V D + + ++MSY
Sbjct: 142 -PAKGTDDYLTFMHETGHALGLKHSFEASQYNDVL---LDAKFEDARYTIMSYTNNYS-- 195
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
TPM+ D+ A+Q IYGA G+++YK +TI+D+GG D +
Sbjct: 196 -----FKPTTPMLLDVAAMQFIYGANTHYHTGDDVYKW---APGQSVFETIWDAGGKDTI 247
Query: 232 DLTLIGGVKNYIDLNTESWSSIG--------------GYEKNMTIAQHTVIESVVGSSGN 277
D + I+LN +S+IG + IA IE+ +GS+ N
Sbjct: 248 DASNQ-EASVKINLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGAHIENAIGSAFN 306
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD- 336
D +IGN +NV G D G G DT+ L + + + +
Sbjct: 307 DTLIGNDLDNVLNGRGGLDTMIGGLGNDTYVIDQAGELDLVQEKADQGVDTLKITYDNTS 366
Query: 337 -----------FLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L++ E + + + + L + L G D +
Sbjct: 367 PIAQVINLNAGTLANFENVHLKGEGAFTVLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQ 426
Query: 385 HFYEFGLSEGRD---ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
G D S + G D+ F S +G + + DAF
Sbjct: 427 GADIMTGGSGADRFVFNNLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTKALDAFS 486
>gi|28870362|ref|NP_792981.1| metalloprotease [Pseudomonas syringae pv. tomato str. DC3000]
gi|28853609|gb|AAO56676.1| metalloprotease, putative [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 535
Score = 173 bits (439), Expect = 8e-41, Method: Composition-based stats.
Identities = 109/504 (21%), Positives = 165/504 (32%), Gaps = 89/504 (17%)
Query: 6 PVYTTERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQE 53
P + + LL +W + + Y + + + D L
Sbjct: 14 PEGSADDRVTSLLWGPFWLGDATGTHLTYSFHTADSVYATIYSGTQEPDDAYSLTDAQAA 73
Query: 54 VARWALGEWSKVVDLTFEETSIH----SDIKFISSNN------GYVCTPRY---DSRYFM 100
A+ AL WS V D+TF E DI+F SNN G T ++
Sbjct: 74 AAKSALDAWSAVADITFTEVKDTPENVGDIRFGGSNNLQSTEFGQAYTAGTEGRSGDVWI 133
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
+ AD KGT +HE GHALGL HP V D + +
Sbjct: 134 GPKVNAAD-----PAKGTDDYLTFMHETGHALGLKHPFEGTQYNDVL---LDAKFEDARY 185
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFI 219
++MSY TPM+ D+ A+Q IYGA GN++YK Q
Sbjct: 186 TIMSYTNNYS-------FKPTTPMLLDVAAMQFIYGANNSYHTGNDVYKWAPDQS---VF 235
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQH 265
+TI+D+GG D +D + I+LN +S+IG + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK-INLNEGEFSTIGKAFLDYNQNPDAPTLMNSGLAIAYG 294
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +GS+ ND +IGN NV G D+ G G DT+ L + N
Sbjct: 295 AHIENAIGSAFNDTLIGNDLANVLDGRGGLDIMIGGLGNDTYVIDQADELALVQEKANEG 354
Query: 326 IVYDANEHKQDFLS------------DVER----------LRFADQCIDSVNVKQRSILE 363
+ + + + E L D+ +++
Sbjct: 355 VDTLKITYDNTSATAAVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVIF 414
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEF--------GLSEGRDITFDSYLYLGSYDDLRNVF 415
A + L+ +G D+ F G D+ D G +
Sbjct: 415 GGAGNDKLVGGLGADIMTGGTGADRFVFNDLAETGKGAASDVITDFNSQQGDKLSFLKMD 474
Query: 416 GSDRGAAARHYITHGVKEGRNPDA 439
+ A + G E
Sbjct: 475 ANVDTKALDAFSFIGSGEFTGAGQ 498
>gi|163851117|ref|YP_001639160.1| beta strand repeat-containing protein [Methylobacterium extorquens
PA1]
gi|163662722|gb|ABY30089.1| autotransporter-associated beta strand repeat protein
[Methylobacterium extorquens PA1]
Length = 1632
Score = 173 bits (438), Expect = 9e-41, Method: Composition-based stats.
Identities = 75/326 (23%), Positives = 117/326 (35%), Gaps = 54/326 (16%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID--SVNVKQRSILE 363
T + + + I + + D ++ VE F D + +
Sbjct: 1328 TASFDFALSQASLRQAPGHIALIGPDGLSYD-VTAVETFVFTDGVVRQKDAAPLVDDLFY 1386
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y A+ + I ++ H+ +G EGRD F + YL + ++
Sbjct: 1387 YAANPDVWQAQI-----DAEAHYAAYGWREGRDPNATFSTGGYLAANPEVAAA----GLD 1437
Query: 422 AARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
H+ G KEGR+P F Y+A H + A D H+ G EG
Sbjct: 1438 PLVHFAQAGWKEGRDPAAGFDVELYLARHPEAQAAGLDP-------LSHYLAQGRAEGLA 1490
Query: 481 V--------------TFDSYLYLGSYDDLR----NVFGSDRGAAARHYITHGVKEGRNPD 522
FD+ YL S D+ G A HY T+G +EGRNP+
Sbjct: 1491 AHTAIGRPADLAQQGGFDAQAYLLSNLDVAEAARAAGGDSFAFARTHYTTYGWQEGRNPN 1550
Query: 523 A-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDL 579
A F Y+A++ D+ A P H+ +G EGR +F+ YL + D+
Sbjct: 1551 AVFDTKGYLAAYGDVAAA-GIDPL------AHYVRYGAAEGRDPSASFDGKAYLAANSDV 1603
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRAL 605
HY+ +G EGR+
Sbjct: 1604 AAA----GLNPMLHYLQYGAAEGRSA 1625
>gi|301384997|ref|ZP_07233415.1| metalloprotease, putative [Pseudomonas syringae pv. tomato Max13]
Length = 535
Score = 173 bits (437), Expect = 1e-40, Method: Composition-based stats.
Identities = 109/504 (21%), Positives = 163/504 (32%), Gaps = 89/504 (17%)
Query: 6 PVYTTERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQE 53
P + + LL +W + + Y + + + D L
Sbjct: 14 PEGSADDRVTSLLWGPFWLGDATGTHLTYSFHTADSVYATIYSGTQEPDDAYSLTDAQAA 73
Query: 54 VARWALGEWSKVVDLTFEETSIH----SDIKFISSNN------GYVCTPRY---DSRYFM 100
A+ AL WS V D+TF E DI+F SNN G T ++
Sbjct: 74 AAKSALDAWSAVADITFTEVKDTPENVGDIRFGGSNNLQSTEFGQAYTAGTEGRSGDVWI 133
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
+ AD KGT LHE GHALGL HP V D + +
Sbjct: 134 GPKVNAAD-----PAKGTDDYLTFLHETGHALGLKHPFEGTQYNDVL---LDAKFEDARY 185
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFI 219
++MSY TPM+ D+ A+Q IYGA GN++YK Q
Sbjct: 186 TIMSYTNNYS-------FKPTTPMLLDVAAMQFIYGANNSYHTGNDVYKWAPDQS---VF 235
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQH 265
+TI+D+GG D +D + I+LN +S+IG + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK-INLNEGEFSTIGKAFLDYNQNADAPTLMNSGLAIAYG 294
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +GS+ ND +IGN NV G D+ G G DT+ L + N
Sbjct: 295 AHIENAIGSAFNDTLIGNDLANVLDGRGGLDIMIGGLGNDTYVIDQADELALVQEKANEG 354
Query: 326 IVYDANEHKQDFLS----------------------DVERLRFADQCIDSVNVKQRSILE 363
+ + + L D+ +++
Sbjct: 355 VDTLKITYDNTSATAAVIDLNAGPLANLENVHLKGEGEFTLLGNDRNNTLTGNDANNVIF 414
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEF--------GLSEGRDITFDSYLYLGSYDDLRNVF 415
A + L+ +G D+ F G D+ D G +
Sbjct: 415 GGAGNDKLVGGLGADIMTGGTGADRFVFNDLAETGKGAASDVITDFNSQQGDKLSFLKMD 474
Query: 416 GSDRGAAARHYITHGVKEGRNPDA 439
+ A + G E
Sbjct: 475 ANVDTKALDAFSFIGSGEFTGAGQ 498
>gi|302133296|ref|ZP_07259286.1| metalloprotease, putative [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|331016597|gb|EGH96653.1| metalloprotease, putative [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 535
Score = 173 bits (437), Expect = 1e-40, Method: Composition-based stats.
Identities = 109/504 (21%), Positives = 165/504 (32%), Gaps = 89/504 (17%)
Query: 6 PVYTTERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQE 53
P + + LL +W + + Y + + + D L
Sbjct: 14 PEGSADDRVTSLLWGPFWLGDATGTHLTYSFHTADSVYATIYSGTQEPDDAYSLTDAQAA 73
Query: 54 VARWALGEWSKVVDLTFEETSIH----SDIKFISSNN------GYVCTPRY---DSRYFM 100
A+ AL WS V D+TF E DI+F SNN G T ++
Sbjct: 74 AAKSALDAWSAVADITFTEVKDTPENVGDIRFGGSNNLQSTEFGQAYTAGTEGRSGDVWI 133
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
+ AD KGT +HE GHALGL HP V D + +
Sbjct: 134 GPKVNAAD-----PAKGTDDYLTFMHETGHALGLKHPFEGTQYNDVL---LDAKFEDARY 185
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFI 219
++MSY TPM+ D+ A+Q IYGA GN++YK Q
Sbjct: 186 TIMSYTNNYS-------FKPTTPMLLDVAAMQFIYGANNSYHTGNDVYKWAPDQS---VF 235
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQH 265
+TI+D+GG D +D + I+LN +S+IG + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK-INLNEGEFSTIGKAFLDYNQNADAPTLMNSGLAIAYG 294
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +GS+ ND +IGN NV G D+ G G DT+ L + N
Sbjct: 295 AHIENAIGSAFNDTLIGNDLANVLDGRGGLDIMIGGLGNDTYVIDQADELALVQEKANEG 354
Query: 326 IVYDANEHKQDFLS------------DVER----------LRFADQCIDSVNVKQRSILE 363
+ + + + E L D+ +++
Sbjct: 355 VDTLKITYDNTSATAAVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVIF 414
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEF--------GLSEGRDITFDSYLYLGSYDDLRNVF 415
A + L+ +G D+ F G D+ D G +
Sbjct: 415 GGAGNDKLVGGLGADIMTGGTGADRFVFNDLAETGKGAASDVITDFNSQQGDKLSFLKMD 474
Query: 416 GSDRGAAARHYITHGVKEGRNPDA 439
+ A + G E
Sbjct: 475 ANVDTKALDAFSFIGSGEFTGAGQ 498
>gi|213969839|ref|ZP_03397973.1| metalloprotease [Pseudomonas syringae pv. tomato T1]
gi|213925387|gb|EEB58948.1| metalloprotease [Pseudomonas syringae pv. tomato T1]
Length = 535
Score = 173 bits (437), Expect = 1e-40, Method: Composition-based stats.
Identities = 110/504 (21%), Positives = 165/504 (32%), Gaps = 89/504 (17%)
Query: 6 PVYTTERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQE 53
P + + LL +W + + Y + + + D L
Sbjct: 14 PEGSADDRVTSLLWGPFWLGDATGTHLTYSFHTADSVYATIYSGTQEPDDAYSLTDAQAA 73
Query: 54 VARWALGEWSKVVDLTFEETSIH----SDIKFISSNN------GYVCTPRY---DSRYFM 100
A+ AL WS V D+TF E DI+F SNN G T ++
Sbjct: 74 AAKSALDAWSAVADITFTEVKDTPENVGDIRFGGSNNLQSTEFGQAYTAGTEGRSGDVWI 133
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
+ AD KGT LHE GHALGL HP V D + +
Sbjct: 134 GPKVNAAD-----PAKGTDDYLTFLHETGHALGLKHPFEGTQYNDVL---LDAKFEDARY 185
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFI 219
++MSY TPM+ D+ A+Q IYGA GN++YK Q
Sbjct: 186 TIMSYTNNYS-------FKPTTPMLLDVAAMQFIYGANNSYHTGNDVYKWAPDQS---VF 235
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQH 265
+TI+D+GG D +D + I+LN +S+IG + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK-INLNEGEFSTIGKAFLDYNQNADAPTLMNSGLAIAYG 294
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +GS+ ND +IGN NV G D+ G G DT+ L + N
Sbjct: 295 AHIENAIGSAFNDTLIGNDLANVLDGRGGLDIMIGGLGNDTYVIDQADELALVQEKANEG 354
Query: 326 IVYDANEHKQDFLS------------DVER----------LRFADQCIDSVNVKQRSILE 363
+ + + + E L D+ +++
Sbjct: 355 VDTLKITYDNTSATAAVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVIF 414
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEF--------GLSEGRDITFDSYLYLGSYDDLRNVF 415
A + L+ +G D+ F G D+ D G +
Sbjct: 415 GGAGNDKLVGGLGADIMTGGTGADRFVFNDLAETGKGAASDVITDFNSQQGDKLSFLKMD 474
Query: 416 GSDRGAAARHYITHGVKEGRNPDA 439
+ A + G E
Sbjct: 475 ANVDTKALDAFSFIGSGEFTGAGQ 498
>gi|307300794|ref|ZP_07580569.1| Serralysin [Sinorhizobium meliloti BL225C]
gi|306904328|gb|EFN34913.1| Serralysin [Sinorhizobium meliloti BL225C]
Length = 551
Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats.
Identities = 93/459 (20%), Positives = 147/459 (32%), Gaps = 82/459 (17%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPD--------VLTTHRLSFDITELNPNAQEVARWALG 60
T D LL D W + LN Q R +L
Sbjct: 10 TGNAYIDGLLGDWKWGIKDFTFSFPTSASFYGAGYGNGEPLKGFAVLNAAQQAATRASLD 69
Query: 61 EWSKVVDLTFEE----TSIHSDIKFISSNN---GYVCTPRYDSRYFMEINFDKADVWRYG 113
++S V ++TF E + H+D++ SS+ + P + + F+K+
Sbjct: 70 QFSSVANVTFTEITESVTKHADLRLASSDAPSTAWAYFPSTAAEG-GDAWFNKSSGHYSR 128
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-----P 168
KG LHE GHALGL H N DS +VMSY
Sbjct: 129 PVKGNYAYVTFLHETGHALGLEHAHEGNV--------MPVNRDSMEYTVMSYRSYVGAST 180
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK------------- 214
+ ++GY + M+ DI A+Q +YGA N Y+
Sbjct: 181 TTGYTNETWGYAQSLMMYDIAALQHMYGADFTTHSENTTYRWSPTSGEMFVNGMGQGAPG 240
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE-------------KNMT 261
+ + T++D GG D D + +DL W++ + N+
Sbjct: 241 GNKILLTVWDGGGTDTYDFSNYTTALK-VDLRPGEWTTTSAAQLAKLHYDGSKVAIGNIA 299
Query: 262 IA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
A ++IE+ G +GND + GN+A N + + GND G G D +
Sbjct: 300 NALQYQGDTRSLIENAKGGAGNDAITGNAAANALWGNGGNDRLIGGDGNDNL--AGGAGA 357
Query: 316 YKIYRFENAIIV-----------------YDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
++ + + E D +ERL + +
Sbjct: 358 DRLDGGNGTDLANYSNATAGMVADLYSPGSNTGEAAGDTYVSIERLYGSAFNDTLRGDNR 417
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
++L A + L G D G D
Sbjct: 418 ANLLNGLAGNDMLNGRDGNDTLIGGNGADRLIGGGGADT 456
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 39/133 (29%), Gaps = 15/133 (11%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS---- 251
G +G + + G DL + + + S +
Sbjct: 337 GGNDRLIGGD---GNDNLAGGAGADRLDGGNGTDLANYSNATAGMVADLYSPGSNTGEAA 393
Query: 252 --------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ G N T+ + G +GND++ G N+ +G D G G
Sbjct: 394 GDTYVSIERLYGSAFNDTLRGDNRANLLNGLAGNDMLNGRDGNDTLIGGNGADRLIGGGG 453
Query: 304 LDTFFYYAPSYLY 316
DTF + +
Sbjct: 454 ADTFVFQTTAQSA 466
>gi|307945601|ref|ZP_07660937.1| serralysin [Roseibium sp. TrichSKD4]
gi|307771474|gb|EFO30699.1| serralysin [Roseibium sp. TrichSKD4]
Length = 951
Score = 172 bits (436), Expect = 2e-40, Method: Composition-based stats.
Identities = 99/335 (29%), Positives = 154/335 (45%), Gaps = 19/335 (5%)
Query: 10 TERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLT 69
+ +A L + SN +V ++++ L + +A AL W V L
Sbjct: 574 NDTLAYQLTNGYWESNGRTERSFNVAPGAVITYNHDGLASGVRHLATTALELWGDVTGLQ 633
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWR--YGIGKGTILSHNALHE 127
F+ TS + I F + +G + + W YG + +HE
Sbjct: 634 FQYTSGSAQITFDDNYSGAYAYSYLSGTTITSSYINVSTAWTDYYGTALNSYSFQTYIHE 693
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCATPMVS 186
+GHALGL H G+YN G + + NDS+ S+MSYF +++ +DAS+ TP ++
Sbjct: 694 VGHALGLGHAGNYN-GSASFDPNVHLANDSWQASLMSYFSQTENTNVDASWALAVTPQMA 752
Query: 187 DIVAVQKIYGAP------------KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
D++AV+ +YG S G+ + +S TI D GG D L+ +
Sbjct: 753 DVLAVRNLYGTTGTTRTDDTTYGDNASSGDTFASL--TAMNSSITYTIVDDGGIDTLNFS 810
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ IDLN E+ S++ G N+ IA+ TVIE+ + +GND +IGNSANN G
Sbjct: 811 NTSANQ-LIDLNAEATSNVRGLTGNVIIARGTVIENAISGNGNDTLIGNSANNHLDGGLG 869
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
D G+ G DTF + A S + FEN I + +
Sbjct: 870 ADTLTGNYGYDTFVFAAGSGNDTVTDFENGIDMIE 904
>gi|110632973|ref|YP_673181.1| peptidase, metallopeptidases [Mesorhizobium sp. BNC1]
gi|110283957|gb|ABG62016.1| peptidase, metallopeptidase [Chelativorans sp. BNC1]
Length = 745
Score = 172 bits (436), Expect = 2e-40, Method: Composition-based stats.
Identities = 112/655 (17%), Positives = 188/655 (28%), Gaps = 120/655 (18%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHR--------LSFDITELNPNAQEVARWALG 60
T D LL W+ + Y ++ + LN Q R A
Sbjct: 10 TGNAYIDGLLSGIKWAPTNLTYSFPTSASYYGSGYGSGEPGSNFGALNSAQQAAGRAAFD 69
Query: 61 EWSKVVDLTFEETSIH----SDIKFISSN---NGYVCTPRYDSRYFMEINFDKADVWRYG 113
+S V ++TF E + +D++ +S+ + P S ++ F+K++ +
Sbjct: 70 IFSSVANITFSEIAETSNQHADLRLAASDMVGTAWAYYPSTRSEG-GDVWFNKSNGYYTS 128
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-----P 168
G LHEIGHALGL H + DS +VMSY
Sbjct: 129 PQAGNYAFTTFLHEIGHALGLEHAHEGHV--------MPAGRDSMEYTVMSYRSYVGAST 180
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK------------- 214
++ +G+ + M+ DI A+Q +YGA + G Y
Sbjct: 181 TSGYVNEKWGFAQSLMMYDIAALQHMYGANYSTNSGATTYSWSPTTGQMFINGTGQDMPG 240
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE-------------KNMT 261
+ T++D GG D + + +DL +W++ + N+
Sbjct: 241 ANRIFLTVWDGGGADTYNFSAYSTSLK-VDLRPGAWTTTSSDQLARLHYDGSKLAAGNIA 299
Query: 262 IA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
A ++IE+ G S +D + GN+A N + GND +G G D +
Sbjct: 300 NALLHGNDPRSLIENAKGGSASDRITGNTAVNKLCGNGGNDTLNGMEGND--VLIGGAGA 357
Query: 316 YKIYRFENAIIV-----------------YDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
K+ + D + +E L + +
Sbjct: 358 DKLNGGSGFDYASYTDATAGVVARLYAPTTNKGYAAGDTYTSIEGLIGSAHSDQLSGDEA 417
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD-ITFDSYLYLGSYDDLRNVFGS 417
+ L A + L + G D + + S G D + + SY D S
Sbjct: 418 GNKLHGGAGNDVLYGLGGNDALYGVDGNDKLFGSAGADKLDGGAGFDYASYQDATAGVVS 477
Query: 418 DRGAAARHYITHGV---------------KEGRNPDAFKALEYIASHEDLINAFADAPDL 462
A + + A L A ++ L +
Sbjct: 478 RLDAPKANSGHAAGDTYSSIEGLIGSKYSDKLYGDAARNKLFGGAGNDVLYGLGGNDALY 537
Query: 463 VQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRN-------VFGSDRGAAARH---- 509
G D + FD Y + + G G
Sbjct: 538 GMDGTDKLVGSAGADKLDGGAGFDYASYQDATAGVVARLDRPSSNTGYAAGDTYTGIEGL 597
Query: 510 ---------YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
Y L + ++ LI AG D F
Sbjct: 598 MGSKYTDKLYGDAAANRLYGEAGNDVLYGLGGNDVLIGGAGADRLYGGAGADRFV 652
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 60/283 (21%), Gaps = 33/283 (11%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ + D G + ++ G Y
Sbjct: 423 GGAGNDVLYGLGGNDALYGVDGNDKLFGSAGADKLDGGAG----FDYASYQDATAGVVSR 478
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ S + S+ + + D + GA L
Sbjct: 479 LDAPKANSGHAAGDTYSSIEGLIGSKYSDKLYGDAARNKLFGGAGNDVLYG--LGGNDAL 536
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE---------------------SWSS 252
+ S G D LD +Y D
Sbjct: 537 YGMDGTDKLVGSAGADKLDGGAGFDYASYQDATAGVVARLDRPSSNTGYAAGDTYTGIEG 596
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + + G +GNDV+ G N+V +G D G +G D F
Sbjct: 597 LMGSKYTDKLYGDAAANRLYGEAGNDVLYGLGGNDVLIGGAGADRLYGGAGADRFVIDKI 656
Query: 313 SYLYKIYR------FENAIIVYDANEHKQDFLSDVERLRFADQ 349
R + + L + F
Sbjct: 657 GNSLPTARDRIGDFTRGEDKIDLRSIDANTSLGGDQAFSFIGG 699
>gi|302185690|ref|ZP_07262363.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv.
syringae 642]
Length = 535
Score = 172 bits (436), Expect = 2e-40, Method: Composition-based stats.
Identities = 102/492 (20%), Positives = 156/492 (31%), Gaps = 80/492 (16%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + S+ + + D L A+ AL WS V
Sbjct: 29 PFWLGDSSGTHLTYSFHRSDSVYAT---DYSRSQEPGDAYSLTDAQAAAAKSALDAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFIS------SNNGYVCTPRY---DSRYFMEINFDKADVWRY 112
D+ F E DI+F + G P ++ + AD
Sbjct: 86 ADIKFTEVQDTADNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPKVNAAD---- 141
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
KGT +HE GHALGL H + V D + + ++MSY
Sbjct: 142 -PAKGTDDYLTFMHETGHALGLKHSFEASQYNDVL---LDAKFEDARYTIMSYTNNYS-- 195
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
TPM+ D+ A+Q IYGA G+++YK +TI+D+GG D +
Sbjct: 196 -----FKPTTPMLLDVAAMQFIYGANTHYHTGDDVYKW---APGQSVFETIWDAGGKDTI 247
Query: 232 DLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSSGN 277
D + I+LN +S+IG + IA IE+ +GS+ N
Sbjct: 248 DASNQLASVK-INLNEGEFSTIGKAFLDYNANPDAPTLMNSGLAIAYGAHIENAIGSAFN 306
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD- 336
D +IGN +NV G D G G DT+ L + + +
Sbjct: 307 DTLIGNDLDNVLNGRGGVDTMIGGLGNDTYVIDQAGELDLVQEKADQGTDTLKITYDNTS 366
Query: 337 -----------FLSDVER----------LRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
L + E L D+ ++L A + L+
Sbjct: 367 PIAQVINLNAGTLVNFENVHLKGEGAFTLLGNDRNNTLTGNDADNVLFGGAGNDKLVGGQ 426
Query: 376 GQDVFESMKHFYEF--------GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
G D+ F G D+ D G + + A +
Sbjct: 427 GADIMTGGSGADRFVFNDLSEMGKGHNSDVITDFNSQQGDKLSFLKMDANVDTKALDAFS 486
Query: 428 THGVKEGRNPDA 439
G E
Sbjct: 487 FIGSGEFTGAGQ 498
>gi|16262469|ref|NP_435262.1| protease [Sinorhizobium meliloti 1021]
gi|14523072|gb|AAK64674.1| Serralysin-like metalloprotease [Sinorhizobium meliloti 1021]
Length = 551
Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats.
Identities = 86/432 (19%), Positives = 140/432 (32%), Gaps = 74/432 (17%)
Query: 28 IRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS----DIKFIS 83
+ L+ Q R AL ++S V ++TF E + + D++ S
Sbjct: 37 ASFYSAGYGNGEPLKGFAALSGAQQAATRAALDQFSSVANVTFTEITESATKHADLRLAS 96
Query: 84 SNN---GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
S+ + P + + F+K+ KG LHE GHALGL H
Sbjct: 97 SDAPSTAWAYFPSTAAEG-GDAWFNKSSGHYSRPVKGNYAYVTFLHETGHALGLEHAHEG 155
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFM-----PQDSMMDASFGYCATPMVSDIVAVQKIY 195
N DS +VMSY + ++GY + M+ DI A+Q +Y
Sbjct: 156 NV--------MPVNRDSMEYTVMSYRSYVGASTTTGYTNETWGYAQSLMMYDIAALQHMY 207
Query: 196 GAP-KGSLGNNIYKIEVQQK-------------DSPFIQTIYDSGGDDLLDLTLIGGVKN 241
GA N Y+ + + T++D GG D D +
Sbjct: 208 GADFTTHSENTTYRWSPTSGEMFVNGMGQGAPGGNKILLTVWDGGGTDTYDFSNYTTALK 267
Query: 242 YIDLNTESWSSIGGYE-------------KNMTIA------QHTVIESVVGSSGNDVVIG 282
+DL W++ + N+ A ++IE+ G +GND + G
Sbjct: 268 -VDLRPGEWTTTSAAQLAKLHYDGSKVAIGNIANALQYQGDTRSLIENAKGGAGNDAITG 326
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--------------- 327
N+A N + + GND G G D + ++ +
Sbjct: 327 NAAANALWGNGGNDRLIGGDGNDNL--AGGAGADRLDGGNGTDLANYSNATAGMVADLYS 384
Query: 328 --YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ E D +ERL + + ++L A + L G D
Sbjct: 385 PGSNTGEAAGDTYVSIERLYGSAFNDTLRGDNRANLLNGLAGNDMLNGRDGNDTLIGGNG 444
Query: 386 FYEFGLSEGRDI 397
G D
Sbjct: 445 ADRLIGGGGADT 456
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 39/133 (29%), Gaps = 15/133 (11%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS---- 251
G +G + + G DL + + + S +
Sbjct: 337 GGNDRLIGGD---GNDNLAGGAGADRLDGGNGTDLANYSNATAGMVADLYSPGSNTGEAA 393
Query: 252 --------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ G N T+ + G +GND++ G N+ +G D G G
Sbjct: 394 GDTYVSIERLYGSAFNDTLRGDNRANLLNGLAGNDMLNGRDGNDTLIGGNGADRLIGGGG 453
Query: 304 LDTFFYYAPSYLY 316
DTF + +
Sbjct: 454 ADTFVFQTTAQSA 466
>gi|288963038|ref|YP_003453317.1| hypothetical protein AZL_f00130 [Azospirillum sp. B510]
gi|288915290|dbj|BAI76773.1| hypothetical protein AZL_f00130 [Azospirillum sp. B510]
Length = 905
Score = 171 bits (434), Expect = 3e-40, Method: Composition-based stats.
Identities = 103/258 (39%), Positives = 131/258 (50%), Gaps = 8/258 (3%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
S L Y ASY DL V G D H+ G +EGR ++FD Y+ SY DL N FG+
Sbjct: 639 VFSPLAYIASYADLSAVFGTDAAAGAAHYIANGRAEGRTVSFDPLAYIASYGDLANAFGA 698
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ A A HYI +G +EGR F L YIAS+ DL N F G H+ G E
Sbjct: 699 NGDAGAAHYIANGRREGRTVS-FDPLAYIASYGDLANVF---GANGGAGAAHYIANGRAE 754
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
GR V+FD YL SY DL FG+DR +A HYIT+G EGR F L Y+A++ DL
Sbjct: 755 GRTVSFDPLAYLASYGDLAAAFGADRRSAEIHYITNGRVEGRTVT-FNPLAYLAANADLA 813
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
AF + H+ G EGR TF+ YL + D+ G D +AA +HYI +
Sbjct: 814 AAFGADSGRAEL---HYLGTGRTEGRRTTFDAGAYLAANGDVAAATGGDLNAAMRHYILY 870
Query: 598 GMKEGRALGISGMQFKSV 615
G EGR L + +
Sbjct: 871 GRLEGRMLSPTASSVHAA 888
Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats.
Identities = 72/172 (41%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
F L YIAS+ DL F H+ G EGR V+FD Y+ SY DL N
Sbjct: 638 PVFSPLAYIASYADLSAVFGTDAAAGAA---HYIANGRAEGRTVSFDPLAYIASYGDLAN 694
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
FG++ A A HYI +G +EGR F L YIAS+ DL N F AG H+
Sbjct: 695 AFGANGDAGAAHYIANGRREGRTVS-FDPLAYIASYGDLANVF---GANGGAGAAHYIAN 750
Query: 558 GYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISG 609
G EGR+++F+P YL SY DL FG+DR +A HYIT+G EGR + +
Sbjct: 751 GRAEGRTVSFDPLAYLASYGDLAAAFGADRRSAEIHYITNGRVEGRTVTFNP 802
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L Y ASY DL G D + H+ G EGR +TF+ YL + DL FG+
Sbjct: 759 SFDPLAYLASYGDLAAAFGADRRSAEIHYITNGRVEGRTVTFNPLAYLAANADLAAAFGA 818
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D G A HY+ G EGR F A Y+A++ D+ A + H+ +G E
Sbjct: 819 DSGRAELHYLGTGRTEGRR-TTFDAGAYLAANGDVAAATGGDLN---AAMRHYILYGRLE 874
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRG 504
GR ++ + + + G
Sbjct: 875 GRMLSPTASSVHAAGLPPEAATLAATG 901
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 36/90 (40%)
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D + H+ G +EGR TFD+ YL + D+ G D AA RHYI +G EG
Sbjct: 816 FGADSGRAELHYLGTGRTEGRRTTFDAGAYLAANGDVAAATGGDLNAAMRHYILYGRLEG 875
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQ 464
R + + A A
Sbjct: 876 RMLSPTASSVHAAGLPPEAATLAATGMGRA 905
>gi|330965844|gb|EGH66104.1| metalloprotease [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 535
Score = 171 bits (432), Expect = 4e-40, Method: Composition-based stats.
Identities = 102/462 (22%), Positives = 158/462 (34%), Gaps = 81/462 (17%)
Query: 6 PVYTTERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQE 53
P + + LL +W + + Y + + D L
Sbjct: 14 PEGSADDRVTSLLWGPFWLGDATGTHLTYSFHTADSVYATDYSRSQEPGDAYSLTDAQAA 73
Query: 54 VARWALGEWSKVVDLTFEETSIH----SDIKFIS------SNNGYVCTPRY---DSRYFM 100
AR ALG WS V D+TF E DI+F G P ++
Sbjct: 74 AARSALGAWSAVADITFTEVKDTPDNVGDIRFGGFQGLQSLEYGQAYAPGTLGRSGDVWI 133
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
+ AD KGT +HE GHALGL H V D + +
Sbjct: 134 GPKVNAAD-----PAKGTDDYLTFMHETGHALGLKHSFEGTQYNDVL---LDAKFEDARY 185
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFI 219
++MSY TPM+ D+ A+Q IYGA GN++YK Q
Sbjct: 186 TIMSYTNNYS-------FKPTTPMLLDVAAMQFIYGANNSYHTGNDVYKWAPDQS---VF 235
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQH 265
+TI+D+GG D +D + I+LN +S+IG + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK-INLNEGEFSTIGKAFLDYNDNPDAPTLMNSGLAIAYG 294
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +GS+ ND +IGN NV G D+ G G DT+ L + N
Sbjct: 295 AHIENAIGSAFNDTLIGNDLANVLDGRGGLDIMIGGLGNDTYVIDQADELALVQEKANEG 354
Query: 326 IVYDANEHKQDFLS------------DVER----------LRFADQCIDSVNVKQRSILE 363
+ + + + E L D+ +++
Sbjct: 355 VDTLKITYDNTSATAAVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVIF 414
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
A ++L+ +G D+ F ++ +I + Y+
Sbjct: 415 GGAGNDELVGGLGADIMTGGTGADRFVFNDLAEIGKGAASYI 456
>gi|110681245|ref|YP_684252.1| VBCS repeat-containing protein [Roseobacter denitrificans OCh 114]
gi|109457361|gb|ABG33566.1| VCBS repeat domain protein [Roseobacter denitrificans OCh 114]
Length = 1301
Score = 170 bits (430), Expect = 7e-40, Method: Composition-based stats.
Identities = 105/370 (28%), Positives = 157/370 (42%), Gaps = 51/370 (13%)
Query: 43 DITELNPNAQEVARWALGEWSKVVDLTFEETSIHS----DIKFISSNNGYVCT-PRYDSR 97
D L ++ R + + +V+ ++F ETS DI F ++ G S
Sbjct: 172 DTNGLTAPRADLVRDVMDVFGEVLGISFVETSSSDASFTDIFFKDTDAGRAYANSTGFSA 231
Query: 98 YFMEINFDKADVWRYGIGK-GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ W G HE+GHALGL H G YN G + D D++ND
Sbjct: 232 GIQYSWINIGQDWSGGTSTYNDYTLQTIFHEVGHALGLGHQGLYN-GSGSFPGDADFDND 290
Query: 157 SFLTSVMSYFMPQ-DSMMDASFGYCATPMVSDIVAVQKIYG----------APKGSLGNN 205
S+ ++MSYF ++ + ASF + TPM D +A+Q IYG LG+
Sbjct: 291 SWQATMMSYFSQNENTTIPASFAFLQTPMAVDWIALQDIYGDQSFGGTNFGITNAFLGDT 350
Query: 206 IYKIEVQ-------------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--- 249
+Y + TI D+GG D LD + + I+L S
Sbjct: 351 VYGFNTNISASTSNIWAEFATYANRTASTIVDAGGIDTLDFSGYSANQ-VINLTPTSQFA 409
Query: 250 ----WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
S+IGG N+T+A+ T+IE+ +G SG+D GN A+NVF + GND F+ S G D
Sbjct: 410 TAPSISNIGGLTGNLTLAEGTIIENAIGGSGSDTFFGNDASNVFRGNGGNDTFNDSLGDD 469
Query: 306 TFFYYAPS------YLYKIYRFENAIIVYDANEHKQDFLSD-VERLRFADQCIDSVNVKQ 358
T++ A + L+ Y F + D + + VE L F DQ
Sbjct: 470 TYYGGAGTDTVDFLGLFSNYSFSISGTFLSVINVAMDLVENTVEFLSFDDQT-----FSF 524
Query: 359 RSILEYTASY 368
++IL+ S
Sbjct: 525 QNILDGLGSN 534
>gi|330875264|gb|EGH09413.1| metalloprotease [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 535
Score = 169 bits (429), Expect = 9e-40, Method: Composition-based stats.
Identities = 108/504 (21%), Positives = 161/504 (31%), Gaps = 89/504 (17%)
Query: 6 PVYTTERIADHLLRDQYW----SNYFIRYKP--------DVLTTHRLSFDITELNPNAQE 53
P + + LL +W + + Y + + D L
Sbjct: 14 PEGSADDRVTSLLWGPFWLGDATGTHLTYSFHTADSVYATDYSRSQEPGDAYSLTDAQAA 73
Query: 54 VARWALGEWSKVVDLTFEETSIH----SDIKFIS------SNNGYVCTPRY---DSRYFM 100
AR ALG WS V D+TF E DI+F G P ++
Sbjct: 74 AARSALGAWSAVADITFTEVKDTPDNVGDIRFGGFQGLQSLEYGQAYAPGTLGRSGDVWI 133
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
+ AD KGT +HE GHALGL H V D + +
Sbjct: 134 GPKVNAAD-----PAKGTDDYLTFMHETGHALGLKHSFEGTQYNDVL---LDAKFEDARY 185
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFI 219
++MSY TPM+ D+ A+Q IYGA GN++YK Q
Sbjct: 186 TIMSYTNNYS-------FKPTTPMLLDVAAMQFIYGANNSYHTGNDVYKWAPDQS---VF 235
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQH 265
+TI+D+GG D +D + I+LN +S+IG + IA
Sbjct: 236 ETIWDAGGKDTIDASNQASFVK-INLNEGEFSTIGKAFLDYNDNPDAPTLMNSGLAIAYG 294
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+ +GS+ ND +IGN NV G D+ G G DT+ L + N
Sbjct: 295 AHIENAIGSAFNDTLIGNDLANVLDGRGGLDIMIGGLGNDTYVIDQADELALVQEKANEG 354
Query: 326 IVYDANEHKQDFLS------------DVER----------LRFADQCIDSVNVKQRSILE 363
+ + + + E L D+ +++
Sbjct: 355 VDTLKITYDNTSATAAVIDLNAGPLANFENVHLKGEGEFTLLGNDRNNTLTGNDANNVIF 414
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEF--------GLSEGRDITFDSYLYLGSYDDLRNVF 415
A + L+ +G D+ F G DI D G +
Sbjct: 415 GGAGNDKLVGGLGADIMTGGTGADRFVFNDLAEIGKGAASDIITDFNSQQGDKLSFLKMD 474
Query: 416 GSDRGAAARHYITHGVKEGRNPDA 439
+ A + G E
Sbjct: 475 ANVDTKALDAFSFIGSGEFTGAGQ 498
>gi|189220078|ref|YP_001940718.1| glycosyltransferase [Methylacidiphilum infernorum V4]
gi|189186936|gb|ACD84121.1| Glycosyltransferase [Methylacidiphilum infernorum V4]
Length = 1154
Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats.
Identities = 72/266 (27%), Positives = 100/266 (37%), Gaps = 43/266 (16%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
Y Y D +Q G D H+ G EGR+ FDS YL +++
Sbjct: 514 SLFDRAYYLGQYPD-VQEAGIDPLL---HYIRHGWKEGRNPNPYFDSAYYLEKNPEVKAA 569
Query: 415 FGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
H+I +G KEGRNP F Y+ + +L + +
Sbjct: 570 ----GVNPLLHFIENGWKEGRNPHPDFDLDLYLETQPELRLSGVNPLKHFLESVK-SLEG 624
Query: 474 GCEEG-------------RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
G G R FD YLG Y D++ HYI HG KEGRN
Sbjct: 625 GTAPGQGTPERGQYLKILRSSLFDKAYYLGQYPDVQEAGID----PLLHYIRHGWKEGRN 680
Query: 521 PDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYD 577
P+ F + Y+ + D+ A P L HF G++EGR+ F+ YL Y
Sbjct: 681 PNPYFNSAYYLEKNPDVKAA-GVNPLL------HFIENGWKEGRNPHPDFDLRSYLERYP 733
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGR 603
D+ + HY+ +G KE R
Sbjct: 734 DVKQA----QVNPLWHYLHYGQKENR 755
Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 100/267 (37%), Gaps = 43/267 (16%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGS 407
+ + Y + Y D+ + G D H+ G EG++ FDS YL
Sbjct: 376 AVKFMESGLFDPGYYWSCYPDVKKA-GADPLL---HYVRHGWKEGKNPNPYFDSAYYLEK 431
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVG 466
+++ H+I +G KEGRNP F Y+ + ++ + +
Sbjct: 432 NPEVKAA----GVNPLLHFIENGWKEGRNPHPDFDLDLYLETQPEVRLSGVNPLKHFLES 487
Query: 467 KDHFSNFGCEEG-------------RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
G G R FD YLG Y D++ HYI H
Sbjct: 488 VK-SLEGGTAPGQGTPERGQYLKILRSSLFDRAYYLGQYPDVQEAGID----PLLHYIRH 542
Query: 514 GVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS--ITFNPD 570
G KEGRNP+ F + Y+ + ++ A P L HF G++EGR+ F+ D
Sbjct: 543 GWKEGRNPNPYFDSAYYLEKNPEVKAA-GVNPLL------HFIENGWKEGRNPHPDFDLD 595
Query: 571 LYLTSYDDLWNVFGSDRSAAAQHYITH 597
LYL + +L +H++
Sbjct: 596 LYLETQPELR----LSGVNPLKHFLES 618
Score = 144 bits (363), Expect = 5e-32, Method: Composition-based stats.
Identities = 61/233 (26%), Positives = 87/233 (37%), Gaps = 49/233 (21%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
R FD YLG Y D++ HYI HG KEGRNP+ F + Y+ + ++
Sbjct: 512 RSSLFDRAYYLGQYPDVQEA----GIDPLLHYIRHGWKEGRNPNPYFDSAYYLEKNPEVK 567
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
A + HF G +EGR FD LYL + +LR + +H++
Sbjct: 568 AAGVNPLL-------HFIENGWKEGRNPHPDFDLDLYLETQPELRLSGVN----PLKHFL 616
Query: 512 TH------------GVKEG------RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
G E F Y+ + D+ A P L H
Sbjct: 617 ESVKSLEGGTAPGQGTPERGQYLKILRSSLFDKAYYLGQYPDVQEA-GIDPLL------H 669
Query: 554 FSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
+ G++EGR+ FN YL D+ H+I +G KEGR
Sbjct: 670 YIRHGWKEGRNPNPYFNSAYYLEKNPDVKAA----GVNPLLHFIENGWKEGRN 718
Score = 106 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 70/217 (32%), Gaps = 48/217 (22%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYD 493
F Y + + D+ A AD H+ G +EG FDS YL
Sbjct: 381 ESGLFDPGYYWSCYPDVKKAGADPLL-------HYVRHGWKEGKNPNPYFDSAYYLEKNP 433
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKD 552
+++ + H+I +G KEGRNP F Y+ + ++
Sbjct: 434 EVKAAGVN----PLLHFIENGWKEGRNPHPDFDLDLYLETQPEVR-------LSGVNPLK 482
Query: 553 HFSNFGYE-EG------------------RSITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
HF EG RS F+ YL Y D+ H
Sbjct: 483 HFLESVKSLEGGTAPGQGTPERGQYLKILRSSLFDRAYYLGQYPDVQEA----GIDPLLH 538
Query: 594 YITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSL 630
YI HG KEGR + + EK+ + +
Sbjct: 539 YIRHGWKEGR----NPNPYFDSAYYLEKNPEVKAAGV 571
Score = 83.7 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 57/173 (32%), Gaps = 24/173 (13%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
Y Y D +Q G D H+ G EGR+ F+S YL D++
Sbjct: 645 SLFDKAYYLGQYPD-VQEAGIDPLL---HYIRHGWKEGRNPNPYFNSAYYLEKNPDVKAA 700
Query: 415 FGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
H+I +G KEGRNP F Y+ + D+ A + H+ ++
Sbjct: 701 ----GVNPLLHFIENGWKEGRNPHPDFDLRSYLERYPDVKQAQVNP-------LWHYLHY 749
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
G +E R S A + + + R F+
Sbjct: 750 GQKENRITK------GKSTPPWEISPSMAPRKKALVFNDYLLVPDRRGGDFRT 796
>gi|330898466|gb|EGH29885.1| serralysin [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 440
Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats.
Identities = 100/325 (30%), Positives = 152/325 (46%), Gaps = 35/325 (10%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + I F +G Y + + + A W + G +HEIGHALG
Sbjct: 5 TAAAAINFSEQKSGAYSNSNYAGSIISDSSVNIASDW---VKYGLYYQQTYIHEIGHALG 61
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCATPMVSDIVAVQ 192
L H G+YN G + + Y+ DS+ SVMSYF +++ +ASFGY ATPM++DIVA+Q
Sbjct: 62 LGHAGNYN-GSATFPNNAFYQEDSWKYSVMSYFSQDENTYSNASFGYVATPMLADIVAIQ 120
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQ------TIYDSGGDDLLDLTLIGGVKNYIDLN 246
+YG G+N Y ++ TIYDSGG+D ++++ G + +DL
Sbjct: 121 SLYGTAVTRTGDNTYSFNKTSINTGTDFVPGLVATIYDSGGNDTINVSTYVGAQ-TVDLR 179
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN------------------SANNV 288
+E++SS+ G N+ IA+ TVIE+ + +G D +IGN N+
Sbjct: 180 SEAFSSLYGGLSNIAIARGTVIENAITGAGADTLIGNASDNFLNANAGNDQLQGGDGNDR 239
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLY-----KIYRFENAIIVYDANEHKQDFLSDVER 343
+G+DV +G +G+DT Y Y + V+DA D LS VER
Sbjct: 240 LMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTALVRNATLSVHDAQTSDVDTLSSVER 299
Query: 344 LRFADQCIDSVNVKQRSILEYTASY 368
L F+D+ + Y A
Sbjct: 300 LSFSDRNASLDELLMAFHSRYGAFN 324
Score = 41.3 bits (95), Expect = 0.49, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 24/126 (19%), Gaps = 5/126 (3%)
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSV 354
S G DT + A +E +
Sbjct: 155 TIYDSGGNDTINVSTYVGAQTVDLRSEAFSSLYGGLSNIAIARGTVIENAITGAGADTLI 214
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL---YLGSYDDL 411
+ L A + L G D G D + Y +YD
Sbjct: 215 GNASDNFLNANAGNDQLQGGDGNDRLMGGAGSDVLNGGNGIDTALYTEAGARYFATYDTA 274
Query: 412 RNVFGS 417
+
Sbjct: 275 LVRNAT 280
>gi|218529968|ref|YP_002420784.1| autotransporter-associated beta strand repeat protein
[Methylobacterium chloromethanicum CM4]
gi|218522271|gb|ACK82856.1| autotransporter-associated beta strand repeat protein
[Methylobacterium chloromethanicum CM4]
Length = 1806
Score = 169 bits (427), Expect = 2e-39, Method: Composition-based stats.
Identities = 75/326 (23%), Positives = 118/326 (36%), Gaps = 54/326 (16%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID--SVNVKQRSILE 363
T + + + I + + D ++ VE F+D + +
Sbjct: 1502 TATFDFALSQASLRQAPGHIALIGPDGLSHD-VTAVETFVFSDGVVRQKDAAPLVDDLFY 1560
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y A+ + I ++ H+ +G EGRD F + YL + ++
Sbjct: 1561 YAANPDVWQAQI-----DAEAHYAAYGWREGRDPNAAFSTGGYLAANPEVAAA----GLD 1611
Query: 422 AARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG-- 478
H+ G KEGR+P F Y+A H + A D H+ G EG
Sbjct: 1612 PLVHFAQAGWKEGRDPAAGFDVERYLARHPEARAAGLDP-------LSHYLAQGRAEGHV 1664
Query: 479 ------------RFVTFDSYLYLGSYDDLR----NVFGSDRGAAARHYITHGVKEGRNPD 522
FD+ YL S D+ G A HY T+G +EGRNP+
Sbjct: 1665 AHTAIGRPADLAEQGGFDAQAYLLSNLDVAEAARAAGGDSFAFARTHYTTYGWQEGRNPN 1724
Query: 523 A-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
A F Y+A++ D+ A P H+ +G EGR + F+ YL + D+
Sbjct: 1725 AVFDTKGYLAAYGDVAAA-GIDPL------AHYVRYGAAEGRDPSAGFDGKAYLAANSDV 1777
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRAL 605
HY+ +G EGR+
Sbjct: 1778 AAA----GLNPMLHYLQYGAAEGRSA 1799
>gi|238623416|emb|CAS06702.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 288
Score = 168 bits (424), Expect = 4e-39, Method: Composition-based stats.
Identities = 70/276 (25%), Positives = 106/276 (38%), Gaps = 37/276 (13%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP TT++ AD L R W + F+ P T L ++ +
Sbjct: 11 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLG-TFSQFSSL 69
Query: 51 AQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFME 101
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 70 QKEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGESW 129
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 130 YLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRAY 189
Query: 161 SVMSYFMPQDSM----MDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEV---- 211
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 190 SVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRSGDTVYGFNSTADR 249
Query: 212 -----QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
S I +++D GG+D L+ + +
Sbjct: 250 DYYSATSASSKLIFSVWDGGGNDTLEFSGFTQNQKI 285
>gi|254560811|ref|YP_003067906.1| amidase-like protein [Methylobacterium extorquens DM4]
gi|254268089|emb|CAX23964.1| putative amidase-related protein [Methylobacterium extorquens DM4]
Length = 1721
Score = 166 bits (420), Expect = 1e-38, Method: Composition-based stats.
Identities = 75/326 (23%), Positives = 118/326 (36%), Gaps = 54/326 (16%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID--SVNVKQRSILE 363
T + + + I + + D ++ VE F D + +
Sbjct: 1417 TASFDFALSQASLRQAPGHIALIGPDGLSHD-VTAVETFVFTDGVVRQKDAAPLVDDLFY 1475
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y A+ + I ++ H+ +G EGRD F + YL + ++
Sbjct: 1476 YAANPDVWQAQI-----DAEAHYAAYGWREGRDPNAAFSTGGYLAANPEVAAA----GLD 1526
Query: 422 AARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG-- 478
H+ G KEGR+P F Y+A H + A D H+ G EG
Sbjct: 1527 PLVHFAQAGWKEGRDPAAGFDVERYLARHPEAQAAGLDP-------LSHYLAQGRAEGHV 1579
Query: 479 ------------RFVTFDSYLYLGSYDDLR----NVFGSDRGAAARHYITHGVKEGRNPD 522
+ FD+ YL S D+ G A HY T+G +EGRNP+
Sbjct: 1580 AHTAIGRPADLAQQGGFDAQAYLLSNLDVAEAARAAGGDSFAFARTHYTTYGWQEGRNPN 1639
Query: 523 A-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
A F Y+A++ D+ A P H+ +G EEG + F+ YL + D+
Sbjct: 1640 AVFDTKSYLAAYGDVAAA-GIDPL------AHYVRYGAEEGHDPSAGFDGKAYLAANSDV 1692
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRAL 605
HY+ +G EGR+
Sbjct: 1693 AAA----GLNPMLHYLQYGAAEGRSA 1714
>gi|317447655|emb|CBJ55059.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 287
Score = 166 bits (419), Expect = 1e-38, Method: Composition-based stats.
Identities = 71/275 (25%), Positives = 106/275 (38%), Gaps = 37/275 (13%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP TT++ AD L R W + F+ P T L ++ +
Sbjct: 14 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLG-TFSQFSSL 72
Query: 51 AQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFME 101
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 73 QKEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGESW 132
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 133 YLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRAY 192
Query: 161 SVMSYFMPQDSM----MDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEV---- 211
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 193 SVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRSGDTVYGFNSTADR 252
Query: 212 -----QQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
S I +++D GG+D LD + +
Sbjct: 253 DYYSATSASSKLIFSVWDGGGNDTLDFSGFTQNQK 287
>gi|88809389|ref|ZP_01124897.1| hypothetical protein WH7805_09564 [Synechococcus sp. WH 7805]
gi|88786608|gb|EAR17767.1| hypothetical protein WH7805_09564 [Synechococcus sp. WH 7805]
Length = 1961
Score = 165 bits (418), Expect = 2e-38, Method: Composition-based stats.
Identities = 120/574 (20%), Positives = 207/574 (36%), Gaps = 81/574 (14%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPD------VLTTHRLSFDITEL-------NPNAQEVA 55
T ++D+L + + + +L+++IT + Q +
Sbjct: 146 TLNELSDYLTTGFWEEAGTYTRRFNLGGSGLGAKNGQLTYNITGWADDSNGLSAERQNLT 205
Query: 56 RWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCT--------------PRYDSRYFME 101
R + + + F E + D +F +++G Y++
Sbjct: 206 REVFNVYEAITGIEFVEVATEGDFRFTDNDSGAYAYLGGGWYDQDPNTGTIDYNAAIIDY 265
Query: 102 INFDKADVWRYGIGK-GTILSHNALHEIGHALGLMHPGSYN--GGYPVYGVDNDYENDSF 158
+ A W YG + HEIGHALGL H G YN G P Y Y ND++
Sbjct: 266 SVINVASSWFYGDSSYNSYTPQTIFHEIGHALGLGHQGQYNAGNGNPTYENSAQYGNDTW 325
Query: 159 LTSVMSYFM-PQDSMMDASFGYCATPMVSDIVAVQKIYGAP-----KGSLGNNIYKIEVQ 212
LT++MSY+ ++ ++AS Y TPM D +A+ K+YG+ K GN +Y +
Sbjct: 326 LTTMMSYWSQTTNTNVNASRAYLQTPMTVDWIALDKLYGSQGYGSFKAFNGNTVYGVGTN 385
Query: 213 QKDS-------------PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-------SWSS 252
T+ D G D+L+++ + +I+L S SS
Sbjct: 386 ISSGTSEIMNNFATMISDTAYTLVDGSGYDILNVSNYSDDQ-FINLAPSELNGTLPSSSS 444
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS---------GNDVFDGSSG 303
IGG N+TI T++E +G SGND +GN A+NVF + G+D + G SG
Sbjct: 445 IGGLVNNLTIGVGTILEEAIGGSGNDTFLGNIADNVFRGGNGGDRFYDSFGSDTYYGGSG 504
Query: 304 L-DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF---LSDVERLRFADQCIDSVNVKQR 359
DT ++ + I ++ N D +D+E + F D I +
Sbjct: 505 TFDTLYFSENYSDFSIENLGTSLAFSRNNSGLADTDLIWNDIELVYFNDDVIKTYQELLA 564
Query: 360 SI--LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS--YLYLGSYDDLRNVF 415
I + + D+ +D +F D + + + +V
Sbjct: 565 DITPINTPPTANDVFVATSEDSNSVSGNFNA------NDPDSSDQLTYTITTAPTIGSVV 618
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF-SNFG 474
+ G ++ + G +YIAS ++ ++ + G + G
Sbjct: 619 VNSDGTFTYNFGNNFQSLGDGDSTAVVFQYIASDDNATDSAPATVTITINGSNDAPILSG 678
Query: 475 CEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ YL DL + G
Sbjct: 679 TPSALTNGTEDIAYLLKASDLLQGYSDIDGDTLS 712
>gi|317447661|emb|CBJ55062.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 284
Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats.
Identities = 71/274 (25%), Positives = 106/274 (38%), Gaps = 37/274 (13%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP TT++ AD L R W + F+ P T L ++ +
Sbjct: 12 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLG-TFSQFSSL 70
Query: 51 AQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFME 101
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 71 QKEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGESW 130
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 131 YLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRAY 190
Query: 161 SVMSYFMPQDSM----MDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEV---- 211
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 191 SVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRSGDTVYGFNSTADR 250
Query: 212 -----QQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
S I +++D GG+D LD + +
Sbjct: 251 DYYSATSASSKLIFSVWDGGGNDTLDFSGFTQNQ 284
>gi|218438236|ref|YP_002376565.1| hypothetical protein PCC7424_1250 [Cyanothece sp. PCC 7424]
gi|218170964|gb|ACK69697.1| hypothetical protein PCC7424_1250 [Cyanothece sp. PCC 7424]
Length = 849
Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats.
Identities = 62/254 (24%), Positives = 95/254 (37%), Gaps = 38/254 (14%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVF 415
Y Y D + G + H+ G EGR + FDS YL Y D+
Sbjct: 134 LFDSSYYLQQYSD-VAESGVNPL---AHYLLSGAREGRKPNPLFDSSYYLQQYPDVA--- 186
Query: 416 GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
HY+ G +EGR P+ F + Y+ + D+ + + + ++G
Sbjct: 187 -ESGVNPLAHYLLSGAREGRKPNPLFDSSYYLQQYPDVAESGVNP-------LADYLDYG 238
Query: 475 CEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIA 531
EGR FDS YL Y D+ + Y+ +G +EGR P+ F + Y+
Sbjct: 239 AREGRKPNPLFDSSYYLQQYPDVVESGVN----PLADYLDYGAREGRKPNPLFDSSYYLL 294
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSA 589
+ ++ P H+ G EGR F+ YL Y D+
Sbjct: 295 QYPNVAE-MGINPL------AHYLLSGAREGRKPNPLFDSSYYLLQYSDV----AESGVN 343
Query: 590 AAQHYITHGMKEGR 603
HY+ G +EGR
Sbjct: 344 PLAHYLLSGAREGR 357
Score = 160 bits (405), Expect = 6e-37, Method: Composition-based stats.
Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 38/254 (14%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVF 415
Y Y D++ G + + ++G EGR + FDS YL Y ++ +
Sbjct: 248 LFDSSYYLQQYPDVV-ESGVNPL---ADYLDYGAREGRKPNPLFDSSYYLLQYPNVAEM- 302
Query: 416 GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
HY+ G +EGR P+ F + Y+ + D+ + + H+ G
Sbjct: 303 ---GINPLAHYLLSGAREGRKPNPLFDSSYYLLQYSDVAESGVNP-------LAHYLLSG 352
Query: 475 CEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIA 531
EGR FDS YL Y D+ + Y+ +G +EGR P++ F + Y+
Sbjct: 353 AREGRKPNPLFDSSYYLQQYPDVVESGVN----PLADYLDYGAREGRKPNSLFNSSYYLQ 408
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSA 589
+ D++ + P H+ ++G EGR F+ YL Y D+ G
Sbjct: 409 QYPDVVES-GVNPL------AHYLDYGALEGRKPNPWFDSGYYLQQYPDV----GEMGIN 457
Query: 590 AAQHYITHGMKEGR 603
HY+ +G EGR
Sbjct: 458 PLAHYLDYGAYEGR 471
Score = 159 bits (401), Expect = 2e-36, Method: Composition-based stats.
Identities = 61/259 (23%), Positives = 100/259 (38%), Gaps = 38/259 (14%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDD 410
+ Y ++ + G D H+ + G EGR + FDS YL Y D
Sbjct: 91 IMESGLFDTGYYWQQNPEIQKA-GLDPLG---HYLDHGGLEGRKPNPLFDSSYYLQQYSD 146
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ HY+ G +EGR P+ F + Y+ + D+ + + H
Sbjct: 147 VA----ESGVNPLAHYLLSGAREGRKPNPLFDSSYYLQQYPDVAESGVNP-------LAH 195
Query: 470 FSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKA 526
+ G EGR FDS YL Y D+ + Y+ +G +EGR P+ F +
Sbjct: 196 YLLSGAREGRKPNPLFDSSYYLQQYPDVAESGVN----PLADYLDYGAREGRKPNPLFDS 251
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFG 584
Y+ + D++ + P + ++G EGR F+ YL Y ++ +
Sbjct: 252 SYYLQQYPDVVES-GVNPLAD------YLDYGAREGRKPNPLFDSSYYLLQYPNVAEM-- 302
Query: 585 SDRSAAAQHYITHGMKEGR 603
HY+ G +EGR
Sbjct: 303 --GINPLAHYLLSGAREGR 319
Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats.
Identities = 52/226 (23%), Positives = 85/226 (37%), Gaps = 33/226 (14%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDS 401
L + + N S +G + H+ G EGR + FDS
Sbjct: 273 LDYGAREGRKPNPLFDSSYYLLQYPNV--AEMGINPL---AHYLLSGAREGRKPNPLFDS 327
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAP 460
YL Y D+ HY+ G +EGR P+ F + Y+ + D++ + +
Sbjct: 328 SYYLLQYSDVA----ESGVNPLAHYLLSGAREGRKPNPLFDSSYYLQQYPDVVESGVNP- 382
Query: 461 DLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
+ ++G EGR F+S YL Y D+ + HY+ +G EG
Sbjct: 383 ------LADYLDYGAREGRKPNSLFNSSYYLQQYPDVVESGVN----PLAHYLDYGALEG 432
Query: 519 RNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
R P+ F + Y+ + D+ P H+ ++G EGR
Sbjct: 433 RKPNPWFDSGYYLQQYPDV-GEMGINPL------AHYLDYGAYEGR 471
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 18/164 (10%)
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
F+++ + ++ + ++ + + Y Y D++ G +
Sbjct: 325 FDSSYYLLQYSDVAESGVNPLAHYLLSGAREGRKPNPLFDSSYYLQQYPDVV-ESGVNPL 383
Query: 381 ESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ ++G EGR F+S YL Y D+ HY+ +G EGR P+
Sbjct: 384 ---ADYLDYGAREGRKPNSLFNSSYYLQQYPDVV----ESGVNPLAHYLDYGALEGRKPN 436
Query: 439 A-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
F + Y+ + D+ + H+ ++G EGR
Sbjct: 437 PWFDSGYYLQQYPDVGEMGINP-------LAHYLDYGAYEGRLA 473
>gi|332706690|ref|ZP_08426751.1| matrixin family protein [Lyngbya majuscula 3L]
gi|332354574|gb|EGJ34053.1| matrixin family protein [Lyngbya majuscula 3L]
Length = 1099
Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats.
Identities = 113/499 (22%), Positives = 171/499 (34%), Gaps = 74/499 (14%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
+ D LL D YW + + + S L+ + + + R AL WS+V ++
Sbjct: 6 SGNNDIDALLDDDYWVDTG--KPVSLTYSINYSTGSDGLDLSERSMVREALTRWSEVANI 63
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFM---------EINFDKADVWRYGIGKGTI 119
TF E S +++F + + ++R + + + G+G
Sbjct: 64 TFREVSNKGNLRFSGQSGISGVASQKNARKWWKPRSWRSDKLDHVNIKLGKDSATGRGHR 123
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVD-NDYENDSFLTSVMSYFMPQDSMMDASFG 178
ALHEIGHALGL HPG YNG Y D+ +VMSY
Sbjct: 124 FLDVALHEIGHALGLKHPGDYNGDTGKGSSPFLPYYKDNNTNTVMSYNDV--------GD 175
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS-------------PFIQTIYDS 225
Y ATPM DI AVQ IYG+ + GN Y+ + S P +I+DS
Sbjct: 176 YAATPMPYDIRAVQYIYGSNNFNSGNTYYRFDSVNGYSYDNGLARRGSEKLPMKLSIWDS 235
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGY----------------------------- 256
GG D LD + +G V I ++ + I G
Sbjct: 236 GGVDTLDFSKLGPVIFNISRSSGYYFDIRGGGILTSQHAYKSITYQPIDNTNNTSSLRYK 295
Query: 257 --EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+IA VIE+V+GS +D +IGN + N +GND G+ G D+ F +
Sbjct: 296 TTRYGTSIAYGVVIENVIGSLTSDTIIGNFSANHLKGGNGNDSLYGNGGSDSLF--GEAG 353
Query: 315 LYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ +Y D + + L + R L + L
Sbjct: 354 NDSLIGGTGRDELYGGTGNDSLDGNTGNDYLSGSSGNDFLRGGTGRDQLHGGTGNDTLSG 413
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFD-------SYLYLGSYDDLRNVFGSDRGAAARHY 426
G D+ G D + + G + G D A+ Y
Sbjct: 414 DSGSDILSGSSGHDYLYGGIGNDYMYGGSGNDTYTVDSSGDHVFEYANQGIDIVYASTTY 473
Query: 427 ITHGVKEGRNPDAFKALEY 445
E N ++
Sbjct: 474 GLSAHLEYLNLTGTNSING 492
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 55/424 (12%), Positives = 99/424 (23%), Gaps = 34/424 (8%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G N I + + GS GND + G N++ SG D G G D +
Sbjct: 664 GESDILNGGAGNDRIYGGGGDDQLYGSYGNDNLYGGFGNDLLKGESGRDRMKGGFGDDQY 723
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTA 366
S I + I ++E L I+ ++++ +
Sbjct: 724 VLDVDSMGDTIVEYAGQGIDKVYTSITYHLGDNLENLELDGTNPINGYGNNLNNVIQGNS 783
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGL-----SEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ ++ G D G + G +
Sbjct: 784 ASNNIWGGRGHDTVNGGDGNDIVYGDYLVTRNGHSYLLSQPGTWFNTQAEAQRLGGNLVT 843
Query: 422 AARHYITHGVKE--GRNPDAFKALEYIASHEDLINAFADAPDLVQV------GKDHFSNF 473
+ + G N D F L + N+
Sbjct: 844 INDEVEQNWLNTTFGFNYDGFNVEANRFEANQLFWIGLTDHTTEGQWQWISGETSTYRNW 903
Query: 474 GCEEGRFVTFDSYLYLG-----SYDDLRNVFGSDRGAAARHYITHGVKEGR----NPDAF 524
E T D + + + + + Y+ HG+ E
Sbjct: 904 AFGEPNNYTDDEDYAVLVSWFNQNWEQTWFWVGAQNYPNKVYL-HGIIELPSVIQEIAGN 962
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFG 584
+L A ++ + D G D G N +
Sbjct: 963 DSLYGGAGNDRIYGGAGDDLLNGGTGND--VLSGGAGADKFVLN-------IPTEGIDYI 1013
Query: 585 SDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYF 644
SD + + G G+ + + + +D L D
Sbjct: 1014 SDFVSQQGDKLQIS-ASGFGSGLVQGILDVGQFVLGAAALDTNDRFIYDRSSGLLSFDAD 1072
Query: 645 GDGN 648
G G
Sbjct: 1073 GSGT 1076
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/256 (16%), Positives = 74/256 (28%), Gaps = 8/256 (3%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
P S V+ + D G + + +YG
Sbjct: 282 PIDNTNNTSSLRYKTTRYGTSIAYGVVIENVIGSLTSDTIIGNFSANHLKGGNGNDSLYG 341
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
GS +Y G+D LD G N + + G
Sbjct: 342 -NGGSDSLFGEAGNDSLIGGTGRDELYGGTGNDSLD----GNTGNDYLSGSSGNDFLRGG 396
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ T +++ G SG+D++ G+S ++ + GND G SG DT Y S
Sbjct: 397 TGRDQLHGGTGNDTLSGDSGSDILSGSSGHDYLYGGIGNDYMYGGSGNDT--YTVDSSGD 454
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVI 375
++ + N I + +E L I+ +++ + ++ +
Sbjct: 455 HVFEYANQGIDIVYASTTYGLSAHLEYLNLTGTNSINGYGNNLNNVINGNSGNNNIWGGL 514
Query: 376 GQDVFESMKHFYEFGL 391
G D
Sbjct: 515 GLDTVNGGDGDDIIYG 530
>gi|238623360|emb|CAS06674.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 283
Score = 164 bits (414), Expect = 5e-38, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 105/273 (38%), Gaps = 37/273 (13%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP TT++ AD L R W + F+ P T L ++ +
Sbjct: 12 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGFATRGLG-TFSQFSSL 70
Query: 51 AQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFME 101
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 71 QKEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGESW 130
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 131 YLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRAY 190
Query: 161 SVMSYFMPQDSM----MDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEV---- 211
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 191 SVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNSTADR 250
Query: 212 -----QQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
S I +++D GG+D LD +
Sbjct: 251 DFYSATSASSKLIFSVWDGGGNDTLDFSGFTQN 283
>gi|288963034|ref|YP_003453313.1| hypothetical protein AZL_f00090 [Azospirillum sp. B510]
gi|288915286|dbj|BAI76769.1| hypothetical protein AZL_f00090 [Azospirillum sp. B510]
Length = 827
Score = 163 bits (413), Expect = 6e-38, Method: Composition-based stats.
Identities = 81/215 (37%), Positives = 105/215 (48%), Gaps = 6/215 (2%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
FD+ YL + DL FG + AAA HY G EGR+ F AL Y+ ++ DL+
Sbjct: 206 FAFDARGYLAANRDLAVAFGDNVVAAAAHYAWSGRNEGRSLGGFDALGYLGANPDLLGVV 265
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
+ H+ G EGR FD Y YL S D+ V+G D AA HY G++
Sbjct: 266 GADAN---AALHHYLVSGAREGRTAGFDPYGYLASNPDVLAVYGLDPVAALIHYGQSGLR 322
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSY 576
EGR F AL YIAS+ DLI AF +A H+ G EGR ITF+ YL +
Sbjct: 323 EGRTATGFDALGYIASYPDLITAFGTD---GKAAVRHYLTSGLAEGRGITFDAAAYLAAN 379
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
D+ G + +AA HYI G +EGR + Q
Sbjct: 380 PDVAAATGGNPAAAEAHYIIAGRREGRMAHPAPRQ 414
Score = 116 bits (291), Expect = 9e-24, Method: Composition-based stats.
Identities = 76/303 (25%), Positives = 115/303 (37%), Gaps = 13/303 (4%)
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
Y+I + A+ ++ AD D +
Sbjct: 88 YRIEGLDVALTGGTLGRFGARAFQQIDGFVGADGDDSVYLGVPGGRSFDGGGGIDR-AIY 146
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D ++ + G + G + + +D G
Sbjct: 147 GTDP---RRYALQDGSHRAETPVVVALDGGGRRYAVVSSRSADVLTDVEMVTIDGRTAAL 203
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF-VTFDSYLYLGSYDD 494
AF A Y+A++ DL AF D H++ G EGR FD+ YLG+ D
Sbjct: 204 VAFAFDARGYLAANRDLAVAFGDNVV---AAAAHYAWSGRNEGRSLGGFDALGYLGANPD 260
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
L V G+D AA HY+ G +EGR F Y+AS+ D++ + P A H+
Sbjct: 261 LLGVVGADANAALHHYLVSGAREGRT-AGFDPYGYLASNPDVLAVYGLDPV---AALIHY 316
Query: 555 SNFGYEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFK 613
G EGR+ T F+ Y+ SY DL FG+D AA +HY+T G+ EGR + +
Sbjct: 317 GQSGLREGRTATGFDALGYIASYPDLITAFGTDGKAAVRHYLTSGLAEGRGITFDAAAYL 376
Query: 614 SVM 616
+
Sbjct: 377 AAN 379
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 61/215 (28%), Gaps = 11/215 (5%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G + I +++ G +GND + GN+ N+V G D +G +G D
Sbjct: 528 ASAGNDYLIGTFRGDAIGGGAGNDTISGLAGNDTLFGNTGNDVLLGGDGADQLEGGAGRD 587
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
F A L + + A E D+L L
Sbjct: 588 LLFGGAGDDLLRGDIIDVAGNDTLLGEEGNDWLDS------GPGNDWLDGGAGVDTLYGG 641
Query: 366 ASYEDLIQVIGQDVFESM-----KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ L G D+ H ++ D L D L +G+D
Sbjct: 642 IGSDVLRGGSGDDILFGDVYTDRSHAISVNPNDSVTGYEDVLLGGAGTDTLIGGYGADLL 701
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
++ I + ++ A
Sbjct: 702 DGGVGADIFSIRNLNESTLAAPDIIINFNGAVVAA 736
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 46/101 (45%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
L Y ASY DLI G D +++H+ GL+EGR ITFD+ YL + D+
Sbjct: 326 TATGFDALGYIASYPDLITAFGTDGKAAVRHYLTSGLAEGRGITFDAAAYLAANPDVAAA 385
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
G + AA HYI G +EGR + L A
Sbjct: 386 TGGNPAAAEAHYIIAGRREGRMAHPAPRQAERLAVPSLAAA 426
>gi|238623358|emb|CAS06673.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 281
Score = 163 bits (412), Expect = 9e-38, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 105/273 (38%), Gaps = 37/273 (13%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP TT++ AD L R W + F+ P T L ++ +
Sbjct: 10 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLG-TFSQFSSL 68
Query: 51 AQEVARWALGEWSKVVDLTFEETSI--HSDIKFISSN-------NGYVCTPRYDSRYFME 101
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 69 QKEQAKLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSSRKGESW 128
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 129 YLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRAY 188
Query: 161 SVMSYFMPQDSM----MDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEV---- 211
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 189 SVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNSTADR 248
Query: 212 -----QQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
S I +++D GG+D LD +
Sbjct: 249 DFYSATSASSKLIFSVWDGGGNDTLDFSGFSQN 281
>gi|75812711|ref|YP_320328.1| hemolysin-type calcium-binding region [Anabaena variabilis ATCC
29413]
gi|75705467|gb|ABA25139.1| Hemolysin-type calcium-binding region [Anabaena variabilis ATCC
29413]
Length = 2296
Score = 163 bits (412), Expect = 1e-37, Method: Composition-based stats.
Identities = 77/417 (18%), Positives = 126/417 (30%), Gaps = 72/417 (17%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ + + G N T+ +++
Sbjct: 1698 TAGDNNDTVTVFTGYANDIILNGGAGNDTLTGG------------------DGDDIITGG 1739
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-----YDANEHKQDFLSDVERLRFA 347
GNDV +G +G D L + V A + +E L
Sbjct: 1740 EGNDVLNGGAGDDVLNVDTTDNLAALRGGTGFDTVIFDTGTTAFSFALGDANSIEFLIAN 1799
Query: 348 DQCIDSVNVKQRS-ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD------ 400
D S + + L+ IG D E F S G D+
Sbjct: 1800 DGANTITYYGATSVVFSGLGGNDVLVSGIGNDRLEGGDGFDTLTSSLGNDVLIGGRGDDI 1859
Query: 401 -----------------------SYLYLGSYDDLRNVFGSDRGAAARHY----ITHGVKE 433
+ Y D + N +DR + + +E
Sbjct: 1860 LDGGDGYDTAVYQGSIFTNVVNFNGSYTYVKDTVNNRNDTDRVSNVEAFSFDDGVRTWQE 1919
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD--SYLYLGS 491
R+ + F Y + D++ A + G H+ +G EGR ++FD Y
Sbjct: 1920 LRDFEDF----YRLRNPDVVAAI--NANKFSSGFYHYVIWGKNEGRPISFDFNEAYYRLL 1973
Query: 492 YDDLRNVFGSDRG-AAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQA 549
Y D+ + + HYI+ G +GR + F Y + D+ A + +
Sbjct: 1974 YKDVDAAIKAGSVRSGLAHYISTGFAQGRQTNFDFNETYYRLLNPDVDAAIKA--GTMPS 2031
Query: 550 GKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGR 603
HF N GY EGR++ FN + Y ++ D+ + HYI G EGR
Sbjct: 2032 ALYHFINHGYSEGRTLASQFNENYYRSANADVNAGIIAGTYKSGLDHYIKTGFAEGR 2088
Score = 115 bits (288), Expect = 3e-23, Method: Composition-based stats.
Identities = 78/436 (17%), Positives = 135/436 (30%), Gaps = 40/436 (9%)
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP---KGSLGNNIYKIEVQQ 213
+V + + ++ T D + G G+++ ++
Sbjct: 1701 DNNDTVTVFTGYANDIILNGGAGNDTLTGGDGDDIITGGEGNDVLNGGAGDDVLNVDTTD 1760
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-AQHTVIESVV 272
+ + G D + ++ + S + + TI
Sbjct: 1761 NLAA----LRGGTGFDTVIFDTGTTAFSFALGDANSIEFLIANDGANTITYYGATSVVFS 1816
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD------------------TFFYYAPSY 314
G GNDV++ N+ G D S G D T Y +
Sbjct: 1817 GLGGNDVLVSGIGNDRLEGGDGFDTLTSSLGNDVLIGGRGDDILDGGDGYDTAVYQGSIF 1876
Query: 315 LYKIYRFENAIIV--YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + V N + D +S+VE F D ++ + + +
Sbjct: 1877 TNVVNFNGSYTYVKDTVNNRNDTDRVSNVEAFSFDDGVRTWQELRDFEDFYRLRNPDVVA 1936
Query: 373 QVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRG-AAARHYITH 429
+ H+ +G +EGR F+ Y Y D+ + + HYI+
Sbjct: 1937 AINANKFSSGFYHYVIWGKNEGRPISFDFNEAYYRLLYKDVDAAIKAGSVRSGLAHYIST 1996
Query: 430 GVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSY 486
G +GR + F Y + D+ A + HF N G EGR F+
Sbjct: 1997 GFAQGRQTNFDFNETYYRLLNPDVDAAIKAGT--MPSALYHFINHGYSEGRTLASQFNEN 2054
Query: 487 LYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGR--NPDAF-KALEYIASHEDLINAFAD 542
Y + D+ + + HYI G EGR DAF L + +++D I A+
Sbjct: 2055 YYRSANADVNAGIIAGTYKSGLDHYIKTGFAEGRMARFDAFSSTLTHGTNNKDYIVGSAN 2114
Query: 543 APDLVQAGKDHFSNFG 558
L D N G
Sbjct: 2115 NDVLRGFAGDDIINAG 2130
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 1/120 (0%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ G + D + + + I N TI + + G +GND + G+
Sbjct: 2100 THGTNNKDYIVGSANNDVLR-GFAGDDIINAGNGNDTIQGGIGNDILRGEAGNDALYGDD 2158
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+ +GND DG +G DTF + A + + + + DF S+VE L
Sbjct: 2159 GNDYLIGGAGNDTMDGGAGTDTFSWDATALKSNDLMAGGLDTLLNPKGDRIDFTSNVEAL 2218
>gi|238623352|emb|CAS06670.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 279
Score = 163 bits (412), Expect = 1e-37, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 105/273 (38%), Gaps = 37/273 (13%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP TT++ AD L R W + F+ P T L ++ +
Sbjct: 8 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLG-TFSQFSSL 66
Query: 51 AQEVARWALGEWSKVVDLTFEETSI--HSDIKFISSN-------NGYVCTPRYDSRYFME 101
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 67 QKEQAKLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSARKGESW 126
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 127 YLINKDYEVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRAY 186
Query: 161 SVMSYFMPQDSM----MDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEV---- 211
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 187 SVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNSTADR 246
Query: 212 -----QQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
S I +++D GG+D LD +
Sbjct: 247 DFYSATSASSKLIFSVWDGGGNDTLDFSGFSQN 279
>gi|163732799|ref|ZP_02140244.1| VCBS repeat domain protein [Roseobacter litoralis Och 149]
gi|161394159|gb|EDQ18483.1| VCBS repeat domain protein [Roseobacter litoralis Och 149]
Length = 1301
Score = 163 bits (411), Expect = 1e-37, Method: Composition-based stats.
Identities = 103/390 (26%), Positives = 163/390 (41%), Gaps = 52/390 (13%)
Query: 24 SNYFIRYKPDVLTT-HRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH----SD 78
+ + Y + +R D L ++ R + + +V+ ++F ETS +D
Sbjct: 152 KSGVLHYNVSGFSNVNRAGTDTNGLTAPRADLVRDVMDVFGEVLGISFVETSSSNADFTD 211
Query: 79 IKFISSNNGYVCT-PRYDSRYFMEINFDKADVWRYGIGK-GTILSHNALHEIGHALGLMH 136
I F ++ G S + W G HE+GHALGL H
Sbjct: 212 IFFKDTDAGRAYANSTGFSAGVQYSWINIGQDWSGGTSTYNDYTLQTIFHEVGHALGLGH 271
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQ-DSMMDASFGYCATPMVSDIVAVQKIY 195
G YN G + D D++NDS+ ++MSYF ++ + ASF + TPM D +A+Q +Y
Sbjct: 272 QGLYN-GSGSFPSDADFDNDSWQATMMSYFSQNENTTIPASFAFLQTPMAVDWIALQDMY 330
Query: 196 G----------APKGSLGNNIYKIEVQ-------------QKDSPFIQTIYDSGGDDLLD 232
G LG+ +Y + TI D+ G D LD
Sbjct: 331 GDQSSGGTNFGISNAFLGDTVYGFNTNISANTSNIWAEFATYANRTASTIVDAAGIDTLD 390
Query: 233 LTLIGGVKNYIDLNTES-------WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
+ + I+L S S+IGG N+T+A+ T+IE+ +G SG+D GN A
Sbjct: 391 FSGYSANQ-LINLTPTSQFATAPSISNIGGLTGNLTLAEGTIIENAIGGSGSDTFFGNDA 449
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPS------YLYKIYRFENAIIVYDANEHKQDFLS 339
+NVF + GND F+ S G DT++ + + L+ Y F + + +
Sbjct: 450 SNVFRGNGGNDTFNDSLGDDTYYGGSGTDTVDFLGLFSNYSFSISGTFLSVINVAMNLVE 509
Query: 340 D-VERLRFADQCIDSVNVKQRSILEYTASY 368
+ VE L F DQ ++IL+ S
Sbjct: 510 NTVEFLSFDDQT-----FSFQNILDGLGSN 534
>gi|254487953|ref|ZP_05101158.1| Ig family protein [Roseobacter sp. GAI101]
gi|214044822|gb|EEB85460.1| Ig family protein [Roseobacter sp. GAI101]
Length = 1075
Score = 163 bits (411), Expect = 1e-37, Method: Composition-based stats.
Identities = 110/345 (31%), Positives = 169/345 (48%), Gaps = 17/345 (4%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
PVY+ ++IAD+L + N + DV T L+ D+ L A+ A AL W+ V
Sbjct: 40 PVYSIDQIADYLTVGFWQDNNMSQRSFDVQTGDTLTVDLRALGTVAETTALRALDAWTAV 99
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
L F + S +DI F S+N+G + +E + +D W+ G G +
Sbjct: 100 SGLKFVQGSS-ADIVFSSANSGAYNSSTTMGTRIIESRVNISDSWQ---GYGDYYLQTFI 155
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQ-DSMMDASFGYCATPM 184
HEIGHALGL H G YN G + D + NDS+ T+VMSYF + +A+ + A+
Sbjct: 156 HEIGHALGLGHSGMYN-GSASFASDAHFANDSWQTTVMSYFDQNENPNTNATRLFLASAQ 214
Query: 185 VSDIVAVQKIYGAPKG-SLGNNIYKIEVQQK------DSPFIQTIYDSGGDDLLDLTLIG 237
+ DI A+QK+YGAP + G++IY + + I D+GG D+++LT
Sbjct: 215 LGDIAAIQKLYGAPTSVATGDSIYGDSANTGQWGMELGTNWSVAIVDNGGTDVINLTSRT 274
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ +DL E++S+I G N++I ++TVIE+ SG+D + GN A N +GND
Sbjct: 275 HNQ-MLDLRAETYSNINGRTGNLSIGRNTVIENATTGSGHDYIFGNDAGNRISSGAGNDT 333
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAI-IVYDANEHKQDFLSDV 341
G+ G D + A VY A + D ++D
Sbjct: 334 ILGNGGDD--VLIGGQGSDILSGGVGADRFVYAALDEAGDTVTDF 376
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/411 (13%), Positives = 102/411 (24%), Gaps = 11/411 (2%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ R ++ + D G TI + + LG
Sbjct: 599 YGGTGNDTLAGGAGNDQMRGEAGDDQMDGGARNDTLYGQDGDDTIAGGDGNDIVYGDLGD 658
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G ++G + + D + D+ +D G S +
Sbjct: 659 DDLRGNDGRDRLFGREGNDSLDGGADDDILDGGDGDNTVDGGSGNDKITTRSGSDIISGG 718
Query: 195 YGAPKGSLGN-NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G + G+ N D D + + G N + I
Sbjct: 719 DGNDRVGAGDGNDMIDGGTGDDYLDGDGGADGILGGDGNDKIFGDAGNDVISGGNGNDYI 778
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N ++ +++ G SG+D ++G S N+ +G+D DG + D + A S
Sbjct: 779 QAGRDNDLVSGDAGNDNIYGDSGDDTILGGSGNDYLKGDAGDDQIDGGADNDKIY--AES 836
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ E + + + + + +
Sbjct: 837 GNDTVAGGEGDDYIAGGSGDD--------LVDGGAGTDRIYADSGNDTVSGGDGADYIKG 888
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G+D + G D + S R Y G
Sbjct: 889 GAGEDQIDGGAGTDRIYAETGHDTVTGGDGDDYISGATGDDVLSGDAGNDRVYGDSGDDL 948
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
L + ++ LI L G D F ++ D
Sbjct: 949 LDGGAGDDILNAGSGNDRLIGGMGADMLLGGSGADVFVFNTLDDAGDTISD 999
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 55/445 (12%), Positives = 110/445 (24%), Gaps = 32/445 (7%)
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
G P N S T+ + T +D++ + + A
Sbjct: 449 DASGAPTGPGTGPIPNGSVDTNYTISNTTMTTWSRDGGFIIDTDGGTDVLDLSLVTYAAT 508
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
L + + K TI ++ + G + + + G N
Sbjct: 509 IDLNSGVTGRIGSNKLIIDAGTIIENLILGSKNDRGTGNGSDNLIYGMGGNDRLYGMAGN 568
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF----------- 308
+ T I+ + G G+D++ G+ N+ + +GND G +G D
Sbjct: 569 DALIGGTGIDMLYGGDGDDILQGDDGNDRLYGGTGNDTLAGGAGNDQMRGEAGDDQMDGG 628
Query: 309 -----YYAPSYLYKIYRFENAIIVYD-------ANEHKQDFLSDVE---RLRFADQCIDS 353
Y I + IVY +D L E L
Sbjct: 629 ARNDTLYGQDGDDTIAGGDGNDIVYGDLGDDDLRGNDGRDRLFGREGNDSLDGGADDDIL 688
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ ++ + + + G D+ G +G D+ D
Sbjct: 689 DGGDGDNTVDGGSGNDKITTRSGSDIISGGDGNDRVGAGDGNDMIDGGTGDDYLDGDGGA 748
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ + G + ++ ++ + + G D
Sbjct: 749 DGILGGDGNDKIFGDAGNDVISGGNGNDYIQAGRDNDLVSGDAGNDNIYGDSGDDTILGG 808
Query: 474 GCEE--GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFKAL 527
+ D D + G+D A G +
Sbjct: 809 SGNDYLKGDAGDDQIDGGADNDKIYAESGNDTVAGGEGDDYIAGGSGDDLVDGGAGTDRI 868
Query: 528 EYIASHEDLINAFADAPDLVQAGKD 552
+ ++ + AG+D
Sbjct: 869 YADSGNDTVSGGDGADYIKGGAGED 893
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/510 (10%), Positives = 108/510 (21%), Gaps = 88/510 (17%)
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD---IVAVQKIYGAPKG 200
+ +D D D S+++Y D + + ++ D I+ +
Sbjct: 484 DGGFIIDTDGGTDVLDLSLVTYAATIDLNSGVTGRIGSNKLIIDAGTIIENLILGSKNDR 543
Query: 201 SLGNNI------YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
GN + + G D+L GG + I + +
Sbjct: 544 GTGNGSDNLIYGMGGNDRLYGMAGNDALIGGTGIDML----YGGDGDDILQGDDGNDRLY 599
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY---- 310
G N T+A + + G +G+D + G + N+ + G+D G G D +
Sbjct: 600 GGTGNDTLAGGAGNDQMRGEAGDDQMDGGARNDTLYGQDGDDTIAGGDGNDIVYGDLGDD 659
Query: 311 ---APSYLYKIYRFENAIIVY-------------------DANEHKQDFLSDVERLRFAD 348
+++ E + + K S + + D
Sbjct: 660 DLRGNDGRDRLFGREGNDSLDGGADDDILDGGDGDNTVDGGSGNDKITTRSGSDIISGGD 719
Query: 349 QCIDSVNVKQRSIL------------------------------------EYTASYEDLI 372
++ + +
Sbjct: 720 GNDRVGAGDGNDMIDGGTGDDYLDGDGGADGILGGDGNDKIFGDAGNDVISGGNGNDYIQ 779
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
D+ G D D + + Y G
Sbjct: 780 AGRDNDLVSGDAGNDNIYGDSGDDTILGGSGNDYLKGDAGDDQIDGGADNDKIYAESGND 839
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE--GRFVTFDSYLYLG 490
+ + + + + G D S + D
Sbjct: 840 TVAGGEGDDYIAGGSGDDLVDGGAGTDRIYADSGNDTVSGGDGADYIKGGAGEDQIDGGA 899
Query: 491 SYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
D + G D G + + + L D
Sbjct: 900 GTDRIYAETGHDTVTGGDGDDYISGATGDDVLSGDAGNDRVYGDSGDDLLDGGAGDDILN 959
Query: 547 VQAGKDHFS-------NFGYEEGRSITFNP 569
+G D G FN
Sbjct: 960 AGSGNDRLIGGMGADMLLGGSGADVFVFNT 989
>gi|238623394|emb|CAS06691.1| alkaline metalloprotease [Pseudomonas fluorescens bv. A]
Length = 287
Score = 163 bits (411), Expect = 1e-37, Method: Composition-based stats.
Identities = 65/275 (23%), Positives = 100/275 (36%), Gaps = 37/275 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ A LLRD + F+ ++ N
Sbjct: 13 NGKPSYSVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSATMNKHGISGFSQFNTQ 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ WS V ++TF E + D N + P + Y
Sbjct: 73 QKAQAALAMQSWSDVANVTFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 132
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 133 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 192
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 193 YSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRAGDTTYGFNSNTG 252
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ +++D GG+D LD + +
Sbjct: 253 RDFYSAKSNADKLVFSVWDGGGNDTLDFSGFTQNQ 287
>gi|325981485|ref|YP_004293887.1| peptidase M10A and M12B matrixin and adamalysin [Nitrosomonas sp.
AL212]
gi|325531004|gb|ADZ25725.1| peptidase M10A and M12B matrixin and adamalysin [Nitrosomonas sp.
AL212]
Length = 511
Score = 163 bits (411), Expect = 1e-37, Method: Composition-based stats.
Identities = 90/356 (25%), Positives = 141/356 (39%), Gaps = 46/356 (12%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH----S 77
+WS+ Y + L Q AL +W+ V +L F + +
Sbjct: 46 FWSSLSGGYGFQFGDGEPWNSAFVPLTTADQINFVRALQQWANVANLNFVQVAETASEVG 105
Query: 78 DIKFISSNN------GYVCTPRYDSRYFMEINFDK-ADVWRYGIGKGTILSHNALHEIGH 130
DI+ + + + P + +I + + G+I LHE+GH
Sbjct: 106 DIRAAYTEDPDESTLAWTYLPSPST-LAGDIWINTKGLLRFQDWNPGSISFETILHELGH 164
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY--CATPMVSDI 188
ALGL HP + V + D+ ++MSY + + TPMV DI
Sbjct: 165 ALGLEHPFADP--NDPSKVGLPRDLDNTRYTIMSYTYSNLEGDEGTEFSFHPTTPMVLDI 222
Query: 189 VAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGG-DDLLDLTLIGGVKNYIDLN 246
A+Q +YG+ N+ Y + + + +TI+D+GG D L + + IDLN
Sbjct: 223 SAIQFLYGSNNFYHAVNDTYTFDD---ANTYHETIWDAGGSSDTLWYAG--AIPSLIDLN 277
Query: 247 TESWS-------------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
S S +IG N+ IA + IE+ +G GND IGN+A+N
Sbjct: 278 PASASQIGKPVYVQSNGVNIGSPIHNIWIADNVTIENAIGGQGNDTFIGNNASN------ 331
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI-IVYDANEHKQDFLSDVERLRFAD 348
DG G DT P + + + + I D N QD L ++ER+ F D
Sbjct: 332 ---SLDGGGGTDTVVIGFPRHQFTLGKSSGHYFIAADTNPANQDILLNIERVEFDD 384
>gi|84685857|ref|ZP_01013753.1| Possible Zn-dependent metalloprotease [Maritimibacter alkaliphilus
HTCC2654]
gi|84665950|gb|EAQ12424.1| Possible Zn-dependent metalloprotease [Rhodobacterales bacterium
HTCC2654]
Length = 622
Score = 162 bits (410), Expect = 2e-37, Method: Composition-based stats.
Identities = 79/404 (19%), Positives = 123/404 (30%), Gaps = 54/404 (13%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
+L I + + A A G V +LTF
Sbjct: 125 VASILWGTQVPTNAITVCFAGAGVEVDGITSEGWSADQITRAMQAFGAIEAVTNLTFTRV 184
Query: 74 SIHSDIKFISS--------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ F+ +N N + R + GT+ +
Sbjct: 185 DDPTSANFLFGLDDDELAVHNLLGYFHPPGEASAGHGNLNGERWDRSALVPGTLTQAILI 244
Query: 126 HEIGHALGLMHPGSYNGGYPV-------YGVDNDYENDSFLTSVMSYFMPQDSMMDAS-- 176
HE+ H LGL HP G V +G + + + MSY + S
Sbjct: 245 HEVLHGLGLSHPHDTGGTSTVMDGVAVAFGDYGTAGLNQGIYTTMSYNFGWNEGDWGSFA 304
Query: 177 -----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL 230
+GY PM DI A+Q +YGA + G++IY + + ++I+D+GG D
Sbjct: 305 ALSGGWGYQTGPMALDIAALQSMYGANLATADGDDIYDLPDLNQIGTGWRSIWDTGGTDT 364
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGY----------EKNMTIAQHTVIESVVGSSGNDVV 280
+ + IDL + G TIAQ +IE+ +GNDV+
Sbjct: 365 IRYAGL--RDAIIDLRPATLDYGPGGGGFLSAARSVAGGFTIAQGVLIENARTGTGNDVL 422
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
IGN ANN GND+ G G D A + + +
Sbjct: 423 IGNDANNALMSGRGNDLVRGGEGADRII--AHRGADTVEGGDGEDWISAGR--------- 471
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + G D+ K
Sbjct: 472 --------GDDAVTGGPGDDSIYAGRGNDRISGGAGNDILWGRK 507
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 13/130 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I G D ++ GG ++ G + +I
Sbjct: 436 GNDLVRGGEGADRIIAHRGADTVE----GGDGEDWISAGRGDDAVTGGPGDDSIYAGRGN 491
Query: 269 ESVVGSSGNDVVIGN---------SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + G +GND++ G + +++ G D G +G DT + +
Sbjct: 492 DRISGGAGNDILWGRKGRDDIDGGTGDDLIIAGPGGDRVRGGAGDDTVTLGFGADTFVFR 551
Query: 320 RFENAIIVYD 329
+ + + D
Sbjct: 552 QGDGHDTITD 561
>gi|238623356|emb|CAS06672.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 281
Score = 162 bits (410), Expect = 2e-37, Method: Composition-based stats.
Identities = 71/271 (26%), Positives = 105/271 (38%), Gaps = 37/271 (13%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP TT++ AD L R W + F+ P T L ++ +
Sbjct: 12 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLG-TFSQFSSL 70
Query: 51 AQEVARWALGEWSKVVDLTFEETSI--HSDIKFISSN-------NGYVCTPRYDSRYFME 101
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 71 QKEQAKLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSSRKGESW 130
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 131 YLINKDYEVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRAY 190
Query: 161 SVMSYFMPQDSM----MDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEV---- 211
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 191 SVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNSTADR 250
Query: 212 -----QQKDSPFIQTIYDSGGDDLLDLTLIG 237
S I +++D GG+D LD +
Sbjct: 251 DFYSATSASSKLIFSVWDGGGNDTLDFSGFS 281
>gi|317447657|emb|CBJ55060.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 289
Score = 162 bits (410), Expect = 2e-37, Method: Composition-based stats.
Identities = 62/276 (22%), Positives = 101/276 (36%), Gaps = 37/276 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ A LLRD + F+ ++ +
Sbjct: 14 NGKPSFSVDQAATQLLRDGAAYQDKDGSGKIELTYTFLTSASSSTMNKHGISGFSQFSAQ 73
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
Q A+ A+ W+ V ++TF E + D N + P + Y
Sbjct: 74 QQNQAKLAMQSWADVANVTFTEKATGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 133
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + HEIGH+LGL HPG YN G D Y D+
Sbjct: 134 WYLINSGYTANKNPDLNNYGRQTLTHEIGHSLGLAHPGDYNAGNGNPTYNDASYGQDTRG 193
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 194 YSIMSYWSENNTSQNFSKGGVEAYASGPLMDDIAAIQKLYGANTTTRTGDTTYGFNSNTG 253
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+ +++D+GG D LD + +
Sbjct: 254 RDFLSASSSSDKVVFSVWDAGGKDTLDFSGFTQNQK 289
>gi|289673120|ref|ZP_06494010.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae pv.
syringae FF5]
Length = 419
Score = 162 bits (410), Expect = 2e-37, Method: Composition-based stats.
Identities = 90/413 (21%), Positives = 142/413 (34%), Gaps = 63/413 (15%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + ++ + + D L A+ AL WS V
Sbjct: 29 PFWLGDSSGTHLTYSFHRADSVYAT---DYSRSQEPGDAYSLTDAQAAAAKSALDAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFIS------SNNGYVCTPRY---DSRYFMEINFDKADVWRY 112
D+ F E DI+F + G P ++ N + AD
Sbjct: 86 ADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNVNAAD---- 141
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
KGT +HE GHALGL H + V D + + ++MSY
Sbjct: 142 -PAKGTDDYLTFMHETGHALGLKHSFEASQYNDVL---LDAKFEDARYTIMSYTNNYS-- 195
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
TPM+ D+ A+Q IYGA G+++YK +TI+D+GG D +
Sbjct: 196 -----FKPTTPMLLDVAAMQFIYGANTHYHTGDDVYKW---APGQSVFETIWDAGGKDTI 247
Query: 232 DLTLIGGVKNYIDLNTESWSSIG--------------GYEKNMTIAQHTVIESVVGSSGN 277
D + I+LN +S+IG + IA IE+ +GS+ N
Sbjct: 248 DASNQ-EASVKINLNEGEFSTIGKAFLDYNANPDAPTSMNSGLAIAYGAHIENAIGSAFN 306
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD- 336
D +IGN +NV G D G G DT+ L + + + +
Sbjct: 307 DTLIGNELDNVLNGRGGLDTMIGGLGNDTYVIDQAGELDLVQEKADQGVDTLKITYDNTS 366
Query: 337 -----------FLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
L++ E + + + + L + L G
Sbjct: 367 PIAQVINLNAGTLANFENVHLKGEGAFTVLGNDRNNTLTGNDADNVLFGGAGN 419
>gi|78185015|ref|YP_377450.1| metalloprotease [Synechococcus sp. CC9902]
gi|78169309|gb|ABB26406.1| metalloprotease [Synechococcus sp. CC9902]
Length = 513
Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats.
Identities = 81/356 (22%), Positives = 128/356 (35%), Gaps = 53/356 (14%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITE---LNPNAQEVARWALGEWSKVVDLTFEETSIH--- 76
+ F+ K + I + Q S ++ F + +
Sbjct: 110 LTYSFMTTKSKLDYGDDRRETIVPYANFSEKQQNDIAKLFESLSDYANIRFIKVPDNNTV 169
Query: 77 SDIKFISSN------------NGYVCTPR----YDSRYFMEINFDKADVWRYGIGKGTIL 120
I+ + TP +F + G
Sbjct: 170 GTIRIGFNTITDEAGKWRPGIYATADTPNPEPRGGDIWFNKNFTKDNFSTGLVENVGPAT 229
Query: 121 -SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD----- 174
S LHEI HALGL HP + P + + +Y + S + F
Sbjct: 230 PSAVMLHEILHALGLEHPDNPKRVTPKFARNREYTLMADEFSHRAEFTQYFKDNGEIASS 289
Query: 175 ----------ASFGYCATPMVSDIVAVQKIYGAPKGSL-GNNIYKIEVQQKDSPFIQTIY 223
+G +TPM DI +Q +YGA GN IYK PF +TI+
Sbjct: 290 LAEFGRSEIRKDYGVSSTPMTWDIAGLQYLYGANTKFQQGNTIYKYSNTI---PFYETIW 346
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIG----------GYEKNMTIAQHTVIESVVG 273
D+ G D ++L+ ++LN S++ N+ IA +TVIE+ +G
Sbjct: 347 DASGIDTINLSNFKKDL-VVNLNGGQLSTLSFDVADQNWSDKQHGNLGIAFNTVIENGIG 405
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
SGND +IGNSANN ++GND G G+D + ++K+ + + I+ D
Sbjct: 406 GSGNDSIIGNSANNTLKGNAGNDTLSGKDGIDVLIGGSGQDIFKLQQGKGHAIIQD 461
>gi|238623400|emb|CAS06694.1| alkaline metalloprotease [Pseudomonas tolaasii]
Length = 286
Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats.
Identities = 66/274 (24%), Positives = 104/274 (37%), Gaps = 37/274 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP +T ++ ADHLLRD + F+ ++ N
Sbjct: 13 NGKPSWTVDQAADHLLRDGASYKDVNHNGKIDLTYTFLTSATTATMNKHGISGFSQFNAQ 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNG--------YVCTPRYDSRYFMEI 102
+ A A+ W+ V +++F E++ D +N + P + Y
Sbjct: 73 QKAQAVLAMQSWADVANVSFTESASGGDTHMTFANYSGGQAGAAAFAYLPGTGAGYDGTS 132
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D DY D+
Sbjct: 133 WYLTNSSYTVNKTPDVNNYGRQTLTHEIGHTLGLAHPGDYNAGTGNPTYKDADYGQDTRG 192
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 193 YSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRAGDTTYGFNSNTG 252
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ +++D GG+D LD +
Sbjct: 253 RDFYSATSNADKLVFSVWDGGGNDTLDFSGFTQN 286
>gi|317447667|emb|CBJ55065.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 287
Score = 161 bits (406), Expect = 4e-37, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 99/275 (36%), Gaps = 37/275 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 13 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 73 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 132
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 133 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 192
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 193 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDTTYGFNSNTG 252
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ +++D GG+D LD + +
Sbjct: 253 RDFLSASSNADKLVFSVWDGGGNDTLDFSGFTQNQ 287
>gi|317447652|emb|CBJ55057.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 289
Score = 161 bits (406), Expect = 4e-37, Method: Composition-based stats.
Identities = 63/276 (22%), Positives = 99/276 (35%), Gaps = 37/276 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 14 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 73
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 74 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 133
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 134 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 193
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 194 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDTTYGFNSNTG 253
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+ +++D GG+D LD + +
Sbjct: 254 RDFLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQK 289
>gi|260436045|ref|ZP_05790015.1| glycosyl hydrolase, BNR repeat [Synechococcus sp. WH 8109]
gi|260413919|gb|EEX07215.1| glycosyl hydrolase, BNR repeat [Synechococcus sp. WH 8109]
Length = 1782
Score = 161 bits (406), Expect = 5e-37, Method: Composition-based stats.
Identities = 101/378 (26%), Positives = 157/378 (41%), Gaps = 49/378 (12%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDV-------LTTHRLSFDITELNPNAQEVARWALGE 61
T + +A++L + + K ++ T + D ++ + A
Sbjct: 46 TLDELANYLESGYWNAQGRSTRKFNLASKPNLYYNTTGNTKDSNGVSSERSNLIEEAFKL 105
Query: 62 WSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW-RYGIGKGTI 119
+ + + F++T + +D +F +++G + A W G
Sbjct: 106 LASTLGINFQKTNAAGADFRFGDNDSGAYARTWTSEGEVTYSEINIASSWHSGSTSLGDY 165
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFG 178
LHEIGHALGL H G+YN Y D D+ NDS+ +S+MSYF ++ +DAS
Sbjct: 166 YFQTTLHEIGHALGLGHLGNYNF-SANYSYDADFINDSWQSSMMSYFDQTDNTSIDASKV 224
Query: 179 YCATPMVSDIVAVQKIY-----GAPKGSLGNNIYKIEVQQKDS-------------PFIQ 220
Y +TPMV+D +A+ +Y G + IY + ++
Sbjct: 225 YLSTPMVADWIALDDLYGQYGFGINNAFTEDTIYGFDTNIGETTSLVFNKLKDLIPTTAY 284
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTE-------SWSSIGGYEKNMTIAQHTVIESVVG 273
TI D GG D LDL+ + IDL S+IGG N++ A T IESV+G
Sbjct: 285 TIVDGGGSDTLDLSGFAATQ-LIDLRPSDKYATNIYASNIGGKIGNLSFAPGTFIESVIG 343
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV---YDA 330
SG D GN+ANN FDG G DT + Y +I+V D
Sbjct: 344 GSGADTFRGNNANNN---------FDGRDGDDTALFNGELSDYSFNLDGQSIVVSDLRDG 394
Query: 331 NEHKQDFLSDVERLRFAD 348
+ QD L+++E + F
Sbjct: 395 SPDGQDTLTNIENIDFNG 412
>gi|227819048|ref|YP_002823019.1| protease [Sinorhizobium fredii NGR234]
gi|227338047|gb|ACP22266.1| possible protease [Sinorhizobium fredii NGR234]
Length = 551
Score = 161 bits (406), Expect = 5e-37, Method: Composition-based stats.
Identities = 88/459 (19%), Positives = 144/459 (31%), Gaps = 82/459 (17%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPD--------VLTTHRLSFDITELNPNAQEVARWALG 60
T D +L D W+ + + N AR A
Sbjct: 10 TGNAYIDGILGDWKWAVSDFTFSFPASASFYGYGYGSGEPLKGFATFNAAQMTAARAAFD 69
Query: 61 EWSKVVDLTFEETSIH----SDIKFISSNN---GYVCTPRYDSRYFMEINFDKADVWRYG 113
+++ V ++T E + D++ SS+ + P + + FDK+ +
Sbjct: 70 QFASVANVTLTEITESATKHGDLRLASSDAPSTAWAYFPSTAAEG-GDAWFDKSSGYYSR 128
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM-----P 168
KG LHEIGHALGL H N DS +VMSY
Sbjct: 129 PVKGNYAYTTFLHEIGHALGLEHAHEGNV--------MPANRDSMEYTVMSYRSYVGAST 180
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK------------- 214
+ ++G+ + M+ DI A+Q +YGA N Y
Sbjct: 181 TTGYTNETWGFAQSLMMYDIAAIQHMYGADFTTHSENTTYCWNQATGEMSINGVAQGAPG 240
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE-------------KNMT 261
+ + T++D GG D D + +DL W++ + N+
Sbjct: 241 GNKILLTVWDGGGIDTYDFSNYATALK-VDLRPGEWTTTSSAQLARLRYDGSKVAVGNIA 299
Query: 262 IA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
A ++IE+ G +GND + GN+A N + ++G D G G D
Sbjct: 300 NALQYKGDARSLIENAKGGAGNDTITGNAAANTLWGNAGKDTLIGGDGNDNLV--GGIGA 357
Query: 316 YKIYRFENAIIV-----------------YDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
++ + + ++ E D VERL +
Sbjct: 358 DRLDGGNGSDLANYYRAAAGIVADLHSPGANSGEAAGDTYVSVERLYGSAFNDTLRGDNL 417
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
++L + L G D G D
Sbjct: 418 ANLLNGLGGNDVLHGRDGNDTLIGGGGADRLIGGSGADT 456
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 33/120 (27%), Gaps = 12/120 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS------------SIGGY 256
+ G DL + + + S + G
Sbjct: 347 GNDNLVGGIGADRLDGGNGSDLANYYRAAAGIVADLHSPGANSGEAAGDTYVSVERLYGS 406
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N T+ + + G GNDV+ G N+ G D G SG DTF +
Sbjct: 407 AFNDTLRGDNLANLLNGLGGNDVLHGRDGNDTLIGGGGADRLIGGSGADTFVFQTTVQSA 466
>gi|238623398|emb|CAS06693.1| alkaline metalloprotease [Pseudomonas rhodesiae]
Length = 278
Score = 160 bits (404), Expect = 7e-37, Method: Composition-based stats.
Identities = 65/272 (23%), Positives = 99/272 (36%), Gaps = 37/272 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 7 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 66
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 67 QKAQAVLAMQSWADVANVTFTEKASGGDAHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 126
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 127 WYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDASYGQDTRG 186
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 187 YSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNTG 246
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 247 RDFLSATSNADKLVFSVWDGGGNDTLDFSGFT 278
>gi|238623376|emb|CAS06682.1| alkaline metalloprotease [Pseudomonas sp. W38a]
Length = 290
Score = 159 bits (403), Expect = 1e-36, Method: Composition-based stats.
Identities = 66/278 (23%), Positives = 102/278 (36%), Gaps = 42/278 (15%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP +T ++ ADHLLR+ + F+ ++ N
Sbjct: 13 NGKPSFTVDQAADHLLRENAAYRDVDGNGKIDLTYTFLTSASQATMNKHGITGFSQFNTQ 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYD-----SR 97
+ A A+ W+ V ++TF E + D N + P + S
Sbjct: 73 QKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNDKYHQSG 132
Query: 98 YFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYE 154
+ + + HEIGH LGL HPG YN G D DY
Sbjct: 133 LDGTSWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDADYG 192
Query: 155 NDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 193 QDTRGYSVMSYWSESNTNQNFSKGGVEAYSSGPLIDDIAAIQKLYGANYSTRAGDTTYGF 252
Query: 210 EVQQ---------KDSPFIQTIYDSGGDDLLDLTLIGG 238
+ +++D GG+D LD +
Sbjct: 253 NSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFSGFTQ 290
>gi|238623396|emb|CAS06692.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 284
Score = 159 bits (403), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 99/272 (36%), Gaps = 37/272 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 13 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGIAGFSQFNAQ 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 73 QKAQAVLAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 132
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 133 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 192
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 193 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNTG 252
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 253 RDFLSATSNADKLVFSVWDGGGNDTLDFSGFT 284
>gi|259414826|ref|ZP_05738749.1| alkaline metalloproteinase [Silicibacter sp. TrichCH4B]
gi|259349277|gb|EEW61024.1| alkaline metalloproteinase [Silicibacter sp. TrichCH4B]
Length = 692
Score = 159 bits (403), Expect = 1e-36, Method: Composition-based stats.
Identities = 97/516 (18%), Positives = 162/516 (31%), Gaps = 83/516 (16%)
Query: 7 VYTTERIADHLLR-DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
+ + IA++L R ++W I + D L+ + A+ V
Sbjct: 7 SFLPQSIANNLTREGRHWDKTTITFSFDDTLPTSGGVSSVTLDTIQRSWINEAIALLEDV 66
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDK-------ADVWRYGIGKGT 118
+D+ F + + DI F + T + +I + + G
Sbjct: 67 IDVDFVQVTSGGDISFNGVSGTSTYTQTFYYLSSGDITSSDVYLSQERDENLGENLSYGN 126
Query: 119 ILSHNALHEIGHALGLMHPGSY-NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
+HE+ H +GL+HP Y N G Y + D+ D+ S+MSYF P +++
Sbjct: 127 QGFQTIIHELLHTVGLLHPSDYGNYGSDDYFLAADFREDTIRHSIMSYFDPAYDGSGSTW 186
Query: 178 GY----------CATPMVSDIVAVQKI--------YGAP-KGSLGNNIYKIEVQQK---- 214
T MV DI+A+ + YG GN Y
Sbjct: 187 AAFDGASFSKIDAQTMMVYDILALSEGSHNGLFSGYGLNLTTRAGNTTYGYNATNGIRQV 246
Query: 215 -----DSPFIQTIYDSGGDDLLDLTL---------------------IGGVKNYIDLNTE 248
+ TIYD+GG D LDL+ V IDL +
Sbjct: 247 FNFDENGAPALTIYDAGGIDTLDLSGDDVSKQRTVTYAVDGSFTFGMTDRVSAIIDLTSG 306
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++SS G N+ IA T+IE+ +G+ D + GN + N G+D G SG D
Sbjct: 307 AYSSTHGMTNNIGIAFGTIIENAIGTVFRDNIKGNGSQNQLHGGRGDDTIFGMSGDDHIH 366
Query: 309 YYAPSYLYKIYRFENAIIVYDA------------------------NEHKQDFLSDVERL 344
+ + L +A+ + D + VE L
Sbjct: 367 GGSGNDLLLGGLGADALDGGEGIDRAQYSDALSAVSVDLLHSGNNSASAAGDTFTSVENL 426
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD-ITFDSYL 403
+ + + + + L G D+ G D + +
Sbjct: 427 FGSGYSDTLKGDGADNWIWGWSGGDTLFGRDGDDILYGGSGNDIMLGGRGADLLDGGDGV 486
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
Y D G D + + + +
Sbjct: 487 DRAQYSDALTRVGVDFLHSTGNIGEAAGDAYVSIEN 522
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/259 (14%), Positives = 70/259 (27%), Gaps = 11/259 (4%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G++ + ++ G + I + +++ G G+D++ G S
Sbjct: 408 SGNNSASAAGDTFTSVENLFGSGYSDTLKGDGADNWIWGWSGGDTLFGRDGDDILYGGSG 467
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N++ G D+ DG G+D Y + + + E D +E +
Sbjct: 468 NDIMLGGRGADLLDGGDGVDRAQYSDALTRVGVDFLHSTGNI---GEAAGDAYVSIENIF 524
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ D + + + L G D + G D F
Sbjct: 525 GSGHGDDLRADNDDNAIWGWIGDDILYGRDGNDYLSGGSGNDTLSGAAGSDTLFG----- 579
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
GS DL D + + S D I+ +
Sbjct: 580 GSGADLLYGGNGDG---SEDTFLFSSVNDSQAGQRDVVFGFVSGVDAIDLKGIDANANLS 636
Query: 466 GKDHFSNFGCEEGRFVTFD 484
+F+ V D
Sbjct: 637 ADQNFTYSSSASANSVWID 655
Score = 40.2 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 56/189 (29%), Gaps = 2/189 (1%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+ + V + +D+ ++ S D FG ++ + G
Sbjct: 414 SAAGDTFTSVENLFGSGYSDTLKGDGADNWIWGWSGGDTLFGRDGDDILYGGSGNDIMLG 473
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYD--SGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
L + ++ Q + D ++ + V + +
Sbjct: 474 GRGADLLDGGDGVDRAQYSDALTRVGVDFLHSTGNIGEAAGDAYVSIENIFGSGHGDDLR 533
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ I + + G GND + G S N+ ++G+D G SG D +
Sbjct: 534 ADNDDNAIWGWIGDDILYGRDGNDYLSGGSGNDTLSGAAGSDTLFGGSGADLLYGGNGDG 593
Query: 315 LYKIYRFEN 323
+ F +
Sbjct: 594 SEDTFLFSS 602
>gi|254500110|ref|ZP_05112262.1| Matrixin family [Labrenzia alexandrii DFL-11]
gi|222441408|gb|EEE48086.1| Matrixin family [Labrenzia alexandrii DFL-11]
Length = 526
Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats.
Identities = 98/407 (24%), Positives = 145/407 (35%), Gaps = 36/407 (8%)
Query: 43 DITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF-----ISSNNGYVCTPRYDSR 97
+ A A EW V +++FE T++ + S T D
Sbjct: 45 GFRAWTDAEKTAALNAFAEWQAVANISFELTTVREEANILQVLTNSDQYAGQTTAPADGV 104
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV----DNDY 153
I + + I G +HEIGHA+GL HP S V D
Sbjct: 105 NPPTIEYSVLNGQFDYIQPGGDTYLTMVHEIGHAIGLYHPHSGTTFPGVTLNADQDTGDN 164
Query: 154 ENDSFLTSVMSYFMPQDSMMDAS--FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
E + + +VMSY + + +G + M DI AVQ +YGA G+N Y +
Sbjct: 165 ELNQQIWTVMSYAVGWTGQPRTTLDYGTGSGAMTFDIAAVQYLYGARAAETGDNTYALPT 224
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT---------ESWSSIGGYEKNMTI 262
+ I+D+GG D + I+L S + G E TI
Sbjct: 225 VNQTGIGWDAIWDTGGTDTISGAGATTSL-TINLTAATLEGANAGGYVSWVTGIEGGFTI 283
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGND-VFDGSSGLDTFFYYAPSYLYKIYRF 321
A VIE+ +G SG+D + GNSANN +G D V + +
Sbjct: 284 ANGVVIENAIGGSGDDSITGNSANNAINGGAGTDSVIYTGDQSGYLVFTGSQGQTMV--- 340
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + +D L++VE L F Q + E + QV E
Sbjct: 341 ----VDLTPSRDGKDSLTNVENLTFNGQSVSVSTAAV----EPADADGSAYQVYRFYNTE 392
Query: 382 SMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ HF+ L+E + D Y G+ D NV + A R Y
Sbjct: 393 TGSHFFTTSLAERNSVIENLDGLSYEGNAFD-SNVTDVNGTAVFRFY 438
>gi|317447659|emb|CBJ55061.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 276
Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats.
Identities = 61/274 (22%), Positives = 98/274 (35%), Gaps = 37/274 (13%)
Query: 4 IKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPNA 51
KP YT ++ A LLR+ + F+ ++ N
Sbjct: 3 GKPSYTVDQAATQLLREGAAYRDFBGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQQ 62
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEIN 103
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 63 KAQAALAMQSWADVANVTFTEKTSGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTSW 122
Query: 104 F--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 123 YLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRGY 182
Query: 161 SVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ-- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 183 SLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDTTYGFNSNTGR 242
Query: 214 -------KDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ +++D GG+D LD + +
Sbjct: 243 DFLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQ 276
>gi|317447671|emb|CBJ55067.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 283
Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats.
Identities = 63/272 (23%), Positives = 97/272 (35%), Gaps = 37/272 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 12 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 71
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V +TF E + D N + P + Y
Sbjct: 72 QKAQAVLAMQSWADVAKVTFTEKATGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 131
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 132 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 191
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 192 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRASDTTYGFNSNTG 251
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 252 RDFLSATSNADKLVFSVWDGGGNDTLDFSGFT 283
>gi|307152892|ref|YP_003888276.1| hypothetical protein Cyan7822_3046 [Cyanothece sp. PCC 7822]
gi|306983120|gb|ADN15001.1| hypothetical protein Cyan7822_3046 [Cyanothece sp. PCC 7822]
Length = 729
Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats.
Identities = 58/254 (22%), Positives = 97/254 (38%), Gaps = 38/254 (14%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVF 415
Y + + G + H+Y+ G EGR + FD+ YL D+
Sbjct: 131 LFDTAYYLQQNPE-VAQSGVNPL---AHYYQNGAREGRKPNPLFDTSYYLEQNPDVA--- 183
Query: 416 GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
HY+ G +GR P+ F + Y+ + ++ + + H+ G
Sbjct: 184 -ESGLNPLVHYLQEGGYQGRKPNPLFNSGYYLQQNPEVAQSGVNP-------LVHYLECG 235
Query: 475 CEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIA 531
+EGR FDS YL ++ + + HY+ G +EGR P++ F + Y+A
Sbjct: 236 AQEGRKPNPLFDSGYYLQQNPEVAHSGLN----PLAHYLECGAREGRKPNSLFDSAYYLA 291
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSA 589
+ ++ + P H+ G EGR F+ D YL D+
Sbjct: 292 QNPEVAQS-GLNPL------AHYLECGAREGRKPNPFFDGDYYLEQNPDV----AEWGDN 340
Query: 590 AAQHYITHGMKEGR 603
HYI +G +GR
Sbjct: 341 PLAHYIDYGAYQGR 354
Score = 155 bits (391), Expect = 3e-35, Method: Composition-based stats.
Identities = 57/286 (19%), Positives = 104/286 (36%), Gaps = 42/286 (14%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGS 407
+ + Y ++ + G D H+ ++G ++GR + FD+ YL
Sbjct: 85 ALLIIESGLFQTGYYWQQNPEVEKA-GIDPLG---HYLDYGAAQGRKPNPLFDTAYYLQQ 140
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVG 466
++ HY +G +EGR P+ F Y+ + D+ + +
Sbjct: 141 NPEVAQS----GVNPLAHYYQNGAREGRKPNPLFDTSYYLEQNPDVAESGLNP------- 189
Query: 467 KDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA- 523
H+ G +GR F+S YL ++ + HY+ G +EGR P+
Sbjct: 190 LVHYLQEGGYQGRKPNPLFNSGYYLQQNPEVAQSGVN----PLVHYLECGAQEGRKPNPL 245
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F + Y+ + ++ ++ P H+ G EGR F+ YL ++
Sbjct: 246 FDSGYYLQQNPEVAHS-GLNPL------AHYLECGAREGRKPNSLFDSAYYLAQNPEV-- 296
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKAD 627
HY+ G +EGR F E++ D A+
Sbjct: 297 --AQSGLNPLAHYLECGAREGR----KPNPFFDGDYYLEQNPDVAE 336
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 42/127 (33%), Gaps = 18/127 (14%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
Y + + H+ E G EGR FDS YL ++
Sbjct: 245 LFDSGYYLQQNP----EVAHSGLNPLAHYLECGAREGRKPNSLFDSAYYLAQNPEVAQS- 299
Query: 416 GSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
HY+ G +EGR P+ F Y+ + D+ + H+ ++G
Sbjct: 300 ---GLNPLAHYLECGAREGRKPNPFFDGDYYLEQNPDVAEWGDNP-------LAHYIDYG 349
Query: 475 CEEGRFV 481
+GR
Sbjct: 350 AYQGRLA 356
>gi|238623390|emb|CAS06689.1| alkaline metalloprotease [Pseudomonas fluorescens bv. A]
Length = 283
Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats.
Identities = 63/272 (23%), Positives = 98/272 (36%), Gaps = 37/272 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 12 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 71
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 72 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 131
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 132 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 191
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 192 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDTTYGFNSNTG 251
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 252 RDFLSASSNADKLVFSVWDGGGNDTLDFSGFT 283
>gi|238623362|emb|CAS06675.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 286
Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats.
Identities = 63/274 (22%), Positives = 98/274 (35%), Gaps = 37/274 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 13 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 73 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 132
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 133 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 192
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 193 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDTTYGFNSNTG 252
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ +++D GG+D LD +
Sbjct: 253 RDFLSATSNADKLVFSVWDGGGNDTLDFSGFTQN 286
>gi|307319197|ref|ZP_07598627.1| Serralysin [Sinorhizobium meliloti AK83]
gi|306895304|gb|EFN26060.1| Serralysin [Sinorhizobium meliloti AK83]
Length = 551
Score = 158 bits (400), Expect = 3e-36, Method: Composition-based stats.
Identities = 87/426 (20%), Positives = 139/426 (32%), Gaps = 74/426 (17%)
Query: 34 VLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS----DIKFISSNN--- 86
LN Q R AL ++S V +++F E + + D++ SS+
Sbjct: 43 GYGNSEPLKGFAVLNAAQQAATRAALDQFSSVANVSFTEITESATKHADLRLASSDAPST 102
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+ P + F+K+ KG LHE GHALGL H N
Sbjct: 103 AWAYFPSTAGEG-GDAWFNKSSGHYSRPVKGNYAYVTFLHETGHALGLEHAHEGNV---- 157
Query: 147 YGVDNDYENDSFLTSVMSYFM-----PQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KG 200
DS +VMSY + ++GY + M+ DI A+Q +YGA
Sbjct: 158 ----MPVNRDSMEYTVMSYRSYVGASTTTGYTNETWGYAQSLMMYDIAALQHMYGADFTT 213
Query: 201 SLGNNIYKIEVQQK-------------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
GN Y+ + + T++D GG D D + +DL
Sbjct: 214 HSGNTTYRWSPTSGEMFTNGIGQGAPGGNKILLTVWDGGGTDTYDFSNYATALK-VDLRP 272
Query: 248 ESWSSIGGYE-------------KNMTIA------QHTVIESVVGSSGNDVVIGNSANNV 288
W++ + N+ A ++IE+ G +GND + GN+A N
Sbjct: 273 GEWTTTSAAQLAKLHYDGSKVAIGNIANALQYQGDTRSLIENAKGGAGNDAITGNAAANA 332
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-----------------YDAN 331
+ + GND G G D + ++ + +
Sbjct: 333 LWGNGGNDRLIGGDGNDNL--AGGAGADRLDGGNGTDLANYANATAGIVADLYSPGSNTG 390
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
E D +ERL + + ++L A + L G D
Sbjct: 391 EAAGDTYVSIERLYGSAFNDTLRGDNRANLLNGLAGNDMLNGRDGNDTLIGGSGADRLIG 450
Query: 392 SEGRDI 397
G D
Sbjct: 451 GGGADT 456
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 38/133 (28%), Gaps = 15/133 (11%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS---- 251
G +G + + G DL + + S +
Sbjct: 337 GGNDRLIGGD---GNDNLAGGAGADRLDGGNGTDLANYANATAGIVADLYSPGSNTGEAA 393
Query: 252 --------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ G N T+ + G +GND++ G N+ SG D G G
Sbjct: 394 GDTYVSIERLYGSAFNDTLRGDNRANLLNGLAGNDMLNGRDGNDTLIGGSGADRLIGGGG 453
Query: 304 LDTFFYYAPSYLY 316
DTF + +
Sbjct: 454 ADTFVFETTAQSA 466
>gi|238623410|emb|CAS06699.1| alkaline metalloprotease [Pseudomonas chlororaphis subsp.
chlororaphis]
Length = 284
Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats.
Identities = 61/274 (22%), Positives = 98/274 (35%), Gaps = 37/274 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A +LRD + F+ ++ +
Sbjct: 11 NGKPSYTVDQAATQILRDGAAYQDLNGSGKIELTYTFLTSASSSTMYKHGISGFSQFSAQ 70
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A ++ W+ V ++TF E + D N + P + Y
Sbjct: 71 QKAQAVLSMQSWADVANVTFTEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 130
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 131 WYLINSSYTQNKNPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 190
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
SVMSY+ ++ + S Y + P++ DI A+QK+YGA G+ Y
Sbjct: 191 YSVMSYWSESNTSQNFSKAGVEAYSSGPLMDDIAAIQKLYGANTTTRTGDTTYGFNSNTG 250
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ +++D+GG D LD +
Sbjct: 251 RDFLSATSSADKLVFSVWDAGGKDTLDFSGFTQN 284
>gi|227357936|ref|ZP_03842279.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
gi|227161845|gb|EEI46874.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
Length = 400
Score = 158 bits (398), Expect = 4e-36, Method: Composition-based stats.
Identities = 82/286 (28%), Positives = 114/286 (39%), Gaps = 26/286 (9%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HE+GHALGL H Y + D ++ S SVM Y +P D Y T M
Sbjct: 1 MHEVGHALGLSHSWQY-----LEYKDKNHVLASLKYSVMGYDIPTSEHADFGGLYPMTFM 55
Query: 185 VSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPF---------IQTIYDSGGDDLLDLT 234
+ DI+ +Q++YG L NNIY + + + I+DSGG D LD +
Sbjct: 56 LLDILLLQQLYGENMTTRLENNIYGFHSNTGRAAYSLKSIEDKLVSCIWDSGGIDTLDFS 115
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L + I+LN S+S IGG N++IA T+IE+ +G SG+D +IGNSANN G
Sbjct: 116 LYTVNQ-VINLNEGSFSDIGGLRSNISIAYKTIIENAIGGSGHDTIIGNSANNELIGGDG 174
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND G G D + +Y +Y L
Sbjct: 175 NDTIKGGLGNDHLY--GGMGNDILYGDIGNDYLYGGIGDD--------ILHGGMGNDILH 224
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
L + L G D F +G D+ F
Sbjct: 225 GSMGNDYLYGNKGNDKLFGGDGDDTLVDYYGNNTFIGGKGNDLLFS 270
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 45/138 (32%), Gaps = 15/138 (10%)
Query: 204 NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ I + TI G+D L GG+ N I + G +
Sbjct: 158 DTIIGNSANNELIGGDGNDTIKGGLGNDHL----YGGMGNDILYGDIGNDYLYGGIGDDI 213
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFYYAP 312
+ + + GS GND + GN N+ F G+D G G D F +
Sbjct: 214 LHGGMGNDILHGSMGNDYLYGNKGNDKLFGGDGDDTLVDYYGNNTFIGGKGNDLLFSISK 273
Query: 313 SYLYKIYRFENAIIVYDA 330
+ ++ E I Y
Sbjct: 274 AGRNELQGGEGNDIFYCG 291
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 41/140 (29%), Gaps = 25/140 (17%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIA 263
K +Y G+D+L + GG+ + I + G N +
Sbjct: 174 GNDTIKGGLGNDHLYGGMGNDILYGDIGNDYLYGGIGDDILHGGMGNDILHGSMGNDYLY 233
Query: 264 QHTVIESVVGSSGNDVVIGNSANNV--------------------FFESSGNDVFDGSSG 303
+ + + G G+D ++ NN GND+F G
Sbjct: 234 GNKGNDKLFGGDGDDTLVDYYGNNTFIGGKGNDLLFSISKAGRNELQGGEGNDIFYCGLG 293
Query: 304 LDTFFYYAPSYLYKIYRFEN 323
+ + + + ++
Sbjct: 294 TNLLYGEQGNDTFNFLCYKG 313
Score = 42.5 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 47/171 (27%), Gaps = 16/171 (9%)
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
S G+DT + + I E + L + + +++
Sbjct: 103 IWDSGGIDTLDFSLYTVNQVINLNEGSFSDIGG-------LRSNISIAYKTIIENAIGGS 155
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRN 413
+ ++ +LI G D + G DI + + YLY G DD+ +
Sbjct: 156 GHDTIIGNSANNELIGGDGNDTIKGGLGNDHLYGGMGNDILYGDIGNDYLYGGIGDDILH 215
Query: 414 VFGSDRGA-----AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
+ Y G + D L + I +
Sbjct: 216 GGMGNDILHGSMGNDYLYGNKGNDKLFGGDGDDTLVDYYGNNTFIGGKGND 266
Score = 38.2 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 53/210 (25%), Gaps = 51/210 (24%)
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
I D ++ + I LG H G +YG D
Sbjct: 150 NAIGGSGHDTIIGNSANNELIGGDGNDTIKGGLGNDHLYGGMGNDILYG-------DIGN 202
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI 219
+ M +D +YG K +
Sbjct: 203 DYLYGGIGDDILHGGMGNDILHGSMGND-----YLYGN----------KGNDKLFGGDGD 247
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ D G++ G + N + + +G +
Sbjct: 248 DTLVDYYGNNTFI----------------------GGKGNDLLFS-------ISKAGRNE 278
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G N++F+ G ++ G G DTF +
Sbjct: 279 LQGGEGNDIFYCGLGTNLLYGEQGNDTFNF 308
>gi|317447643|emb|CBJ55052.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 275
Score = 158 bits (398), Expect = 4e-36, Method: Composition-based stats.
Identities = 60/272 (22%), Positives = 97/272 (35%), Gaps = 37/272 (13%)
Query: 6 PVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQE 53
P YT ++ A LLR+ + F+ ++ N +
Sbjct: 4 PSYTVDQAATQLLREGAAYRDFBGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQQKA 63
Query: 54 VARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEINF- 104
A A+ W+ V ++TF E + D N + P + Y +
Sbjct: 64 QAALAMQSWADVANVTFTEKTSGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTSWYL 123
Query: 105 -DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLTSV 162
+ + HEIGH LGL HPG YN G D Y D+ S+
Sbjct: 124 TNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRGYSL 183
Query: 163 MSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 184 MSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDTTYGFNSNTGRDF 243
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ +++D GG+D LD + +
Sbjct: 244 LSATSNADKLVFSVWDGGGNDTLDFSGFTQNQ 275
>gi|260428691|ref|ZP_05782669.1| serralysin (Extracellular metalloproteinase) [Citreicella sp. SE45]
gi|260420285|gb|EEX13537.1| serralysin (Extracellular metalloproteinase) [Citreicella sp. SE45]
Length = 772
Score = 158 bits (398), Expect = 4e-36, Method: Composition-based stats.
Identities = 99/495 (20%), Positives = 158/495 (31%), Gaps = 28/495 (5%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG- 142
Y P ++ + A V + G+ LHE+GHA+GL HPG YN
Sbjct: 228 GAYAYFPGPTSSGSPAGDVWINNASVSADSLPVGSFDHFVLLHELGHAVGLSHPGDYNAT 287
Query: 143 --GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-K 199
G YG Y DS+ SVMSYF ++ GY T ++ DI A+Q++YG
Sbjct: 288 AGGVITYGDQAAYLEDSYQYSVMSYFDESNTTSSI-GGYPDTLLLHDIQALQQLYGVNYG 346
Query: 200 GSLGNNIYKIEVQQKDS-------PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G+++Y + +I+D GG D LD++ GG + +I L +S
Sbjct: 347 YHAGDSVYGFNSTLGGAYDFSQNSDPFLSIWDGGGRDRLDVSGFGGNQ-FITLVEGEFSD 405
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
IGGY N++IA IE VG SG+D + GN+ +N +D+ G G DT
Sbjct: 406 IGGYRGNVSIAYGAGIEEAVGGSGDDTLQGNALDNTLLGGGHDDLIRGGDGNDTI--DGE 463
Query: 313 SYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
I ++ + + + + ++ + +
Sbjct: 464 GGADSIDGDAGHDLLTGGRGDDLIRGGTGADTIDGSGGDDTLYGDSSTDLIYGGLDNDLI 523
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D + D + F + Y GV
Sbjct: 524 AGGTGSDTIYGDAGDDSLYGNTAFDTIYGGDGDDFISSGDGADFVDGGAGSDMIYGRSGV 583
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
D D + + + + + G R D L
Sbjct: 584 DLLHGGD----------DNDSMWGSEGDDVMYGDAGNDYLSGGSALDRLQGGDGNDTLYG 633
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
++G Y G R D L + + L +
Sbjct: 634 NFGEDQLWGDAGNDEL--YGGSGYDTLRGGDGNDTLLGMEGKDWLFGGAGNDLLRGGTNY 691
Query: 552 DHFSNFGYEEGRSIT 566
D F + I+
Sbjct: 692 DSFVFDVGHDNDEIS 706
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 79/281 (28%), Gaps = 9/281 (3%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ + AD G T+ ++ I L G
Sbjct: 470 DGDAGHDLLTGGRGDDLIRGGTGADTIDGSGGDDTLYGDSSTDLIYGGLDNDLIAGGTGS 529
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+YG D Y D + + G + + G G
Sbjct: 530 DTIYGDAGDDSLYGNTAFDTIYGGDGDDFISSGDGADFVDGGAGSDMIYGRSGVDLLHGG 589
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEK 258
++ S +Y G+D L L GG N + G
Sbjct: 590 DD----NDSMWGSEGDDVMYGDAGNDYLSGGSALDRLQGGDGNDTLYGNFGEDQLWGDAG 645
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N + + +++ G GND ++G + F +GND+ G + D+F + +I
Sbjct: 646 NDELYGGSGYDTLRGGDGNDTLLGMEGKDWLFGGAGNDLLRGGTNYDSFVFDVGHDNDEI 705
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
F+ + L+D + + A + V
Sbjct: 706 SDFDERGDALQLSTALTGGLTDADAILSAYGSDAAGVVLLD 746
>gi|238623372|emb|CAS06680.1| alkaline metalloprotease [Pseudomonas sp. Z57b]
Length = 282
Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 102/277 (36%), Gaps = 42/277 (15%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ ADHLLR+ + F+ ++ N
Sbjct: 6 NGKPSFSVDQAADHLLRENAAYRDVDGNGKIDLTYTFLTSASSATMNKHGITGFSQFNTQ 65
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYD-----SR 97
+ A A+ W+ V ++TF E + D N + P + S
Sbjct: 66 QKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNDKYHQSG 125
Query: 98 YFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYE 154
+ + + HEIGH LGL HPG YN G D DY
Sbjct: 126 LDGTSWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDADYG 185
Query: 155 NDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 186 QDTRGYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGF 245
Query: 210 EVQQ---------KDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 246 NSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFSGFT 282
>gi|238623423|emb|CAS06706.1| alkaline metalloprotease [Pseudomonas azotoformans]
gi|317447669|emb|CBJ55066.1| alkaline metalloprotease [Pseudomonas azotoformans]
Length = 282
Score = 157 bits (396), Expect = 6e-36, Method: Composition-based stats.
Identities = 63/270 (23%), Positives = 99/270 (36%), Gaps = 37/270 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ A LLRD + F+ ++ N
Sbjct: 13 NGKPSYSVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGIAGFSQFNAQ 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 73 QKAQAVLAMQSWADVANVTFTEKATGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 132
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 133 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 192
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 193 YSLMSYWSESNTNQNFSKGGVEAYASAPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNTG 252
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTL 235
+ +++D GG+D LD +
Sbjct: 253 RDFYSATSNADKLVFSVWDGGGNDTLDFSG 282
>gi|238623388|emb|CAS06688.1| alkaline metalloprotease [Pseudomonas sp. W17c]
Length = 285
Score = 157 bits (396), Expect = 7e-36, Method: Composition-based stats.
Identities = 63/274 (22%), Positives = 103/274 (37%), Gaps = 38/274 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ A LLRD + F+ K + ++ ++ +
Sbjct: 13 NGKPSFSVDQAATQLLRDGAHWNDLDHSGKIELTYTFLTAKTANFSGLGVT-GFSQFSAL 71
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y +
Sbjct: 72 QKAQAVLAMQSWADVANVTFTEAARGGDGHMTFGNYSGGQEGAAAFAFLPGTEPGYDGQS 131
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ G HEIGH LGL HPG YN G D Y D+
Sbjct: 132 WYLTGSGYDVNKTPGLSNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPTYKDASYGQDTRG 191
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 192 YSLMSYWSESNTNQNFSKGGVEAYASGPLMDDIAAIQKLYGANTTTRTGDTTYGFNSNTG 251
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ +++D+GG D LD +
Sbjct: 252 RDFLSASSSSDKVVFSVWDAGGKDTLDFSGFTQN 285
>gi|317447665|emb|CBJ55064.1| alkaline metalloprotease [Pseudomonas sp. R-38748]
Length = 292
Score = 156 bits (395), Expect = 8e-36, Method: Composition-based stats.
Identities = 64/280 (22%), Positives = 104/280 (37%), Gaps = 42/280 (15%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ ADHLLR+ + F+ ++ +
Sbjct: 13 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGISGFSQFSNL 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYD-----SR 97
+ A A+ W+ V ++TF E + D N + P + S
Sbjct: 73 QKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHTSG 132
Query: 98 YFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYE 154
+ + + G HEIGH LGL HPG YN G D DY
Sbjct: 133 TDGTSWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDADYG 192
Query: 155 NDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 193 QDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGF 252
Query: 210 EVQQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ +++D GG+D LD + +
Sbjct: 253 NSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQ 292
>gi|304394845|ref|ZP_07376731.1| secreted protease C [Ahrensia sp. R2A130]
gi|303293036|gb|EFL87450.1| secreted protease C [Ahrensia sp. R2A130]
Length = 594
Score = 156 bits (395), Expect = 9e-36, Method: Composition-based stats.
Identities = 93/456 (20%), Positives = 146/456 (32%), Gaps = 64/456 (14%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P +T D L+ N I Y + A W++V
Sbjct: 2 PNFTNNAYQDALIEGYRLGNTTIEYYLADTAAGN-------FTQIERTAFAQATALWNEV 54
Query: 66 VDLTFEETSIHSDI----------------------KFISSNNGYVCTPRYDS------- 96
++ F ET++ +D FI SN V T D
Sbjct: 55 ANINFAETAVQADAEFIESLYVSGADGTSGNLGVHQNFIGSNTTVVDTITIDGTFATALS 114
Query: 97 RYFMEINFDKADVW-RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ F + G+ +G I +HE+GH LGL H P + E
Sbjct: 115 GSYNRSGFGWDETNANGGLQRGGIGFATIVHELGHGLGLDHTHITGSNDPHFFPGAPGEY 174
Query: 156 D-------SFLTSVMSYFMPQDSMMDA-----SFGYCATPMVSDIVAVQKIYGAP-KGSL 202
D S L S+MSY + + ++G PM DI VQ +YGA
Sbjct: 175 DAGNNGLNSELYSIMSYRSGPEIRPNFIGETQNYGTVGGPMAFDIATVQFLYGANMTTRT 234
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT----------ESWSS 252
G+++Y + + I+D+GG D + G IDL S
Sbjct: 235 GDDVYTMPSANAPGTYWSAIWDAGGTDTISHAG-GTAAVTIDLRAATLQDEVGGGGFISR 293
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+G TIA VIE+ G D ++GN+A N +G D G +G D +Y
Sbjct: 294 VGTIYGGYTIANGVVIENATGGQAADTLVGNAAANALDGGAGADTMTGGAGDD--YYVVE 351
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDL 371
+ + D +VE LR N I++ + +
Sbjct: 352 NVGDTVTELAGEGSDIIDTFVSYDVPVNVEVLRMQGTADLGTNGSVNRDIIQGNSGNNYI 411
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
G D+ + + + +D ++
Sbjct: 412 NGAGGLDLMVGGSGNDTYTIDDSQDAVIEAAGGGDD 447
>gi|238623374|emb|CAS06681.1| alkaline metalloprotease [Pseudomonas sp. W12b]
Length = 277
Score = 156 bits (395), Expect = 9e-36, Method: Composition-based stats.
Identities = 65/275 (23%), Positives = 102/275 (37%), Gaps = 42/275 (15%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ ADHLLR+ + F+ ++ N
Sbjct: 3 NGKPSFSVDQAADHLLRENAAYRDLDGNGKIDLTYTFLTSASSATMNKHGITGFSQFNTQ 62
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYD-----SR 97
+ A A+ W+ V ++TF E + D N + P + S
Sbjct: 63 QKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNDKYHQSG 122
Query: 98 YFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYE 154
+ + + HEIGH LGL HPG YN G D DY
Sbjct: 123 LDGTSWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDADYG 182
Query: 155 NDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 183 QDTRGYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGF 242
Query: 210 EVQQ---------KDSPFIQTIYDSGGDDLLDLTL 235
+ +++D GG+D LD +
Sbjct: 243 NSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFSG 277
>gi|238623382|emb|CAS06685.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 285
Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats.
Identities = 64/280 (22%), Positives = 104/280 (37%), Gaps = 42/280 (15%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ ADHLLR+ + F+ ++ +
Sbjct: 6 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGISGFSQFSNL 65
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYD-----SR 97
+ A A+ W+ V ++TF E + D N + P + S
Sbjct: 66 QKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHTSG 125
Query: 98 YFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYE 154
+ + + G HEIGH LGL HPG YN G D DY
Sbjct: 126 TDGTSWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDADYG 185
Query: 155 NDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 186 QDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGF 245
Query: 210 EVQQ---------KDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ +++D GG+D LD + +
Sbjct: 246 NSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQ 285
>gi|254426342|ref|ZP_05040058.1| Peptidase M10 serralysin C terminal family [Synechococcus sp. PCC
7335]
gi|196187756|gb|EDX82722.1| Peptidase M10 serralysin C terminal family [Synechococcus sp. PCC
7335]
Length = 589
Score = 156 bits (393), Expect = 1e-35, Method: Composition-based stats.
Identities = 72/423 (17%), Positives = 128/423 (30%), Gaps = 61/423 (14%)
Query: 29 RYKPDVLTTHRLSFD-ITELNPNAQEVARWALGEWSKVVDLTFEETSIHSD-------IK 80
++ + FD N + R + + V + +E + + D
Sbjct: 89 EFRDKDYESDYGGFDGFNAFNSAQKAATRSIMKMYESVANFDLDELTDNKDRDATIRLAN 148
Query: 81 FISSN--NGYVCTPRYDSRYFMEINFDK-ADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
+N +G P ++ D D G +HEIGHALGL H
Sbjct: 149 ADGTNRFDGIAGFPSEPDFMQGDVWIDSVNDPRNTNPKIGNKGYWVLMHEIGHALGLTHS 208
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSY----FMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ D DS +VMSY + M+ DI A+Q
Sbjct: 209 HETHAN---LDGPMDSWLDSKEFTVMSYKAHVGGELIPNPVDEVDQPQSLMMYDIAAIQA 265
Query: 194 IYGAP-KGSLGNNIYKIEVQQK-------------DSPFIQTIYDSGGDDLLDLTLIGGV 239
+YGA GN Y ++ +TI+D G D D + G
Sbjct: 266 MYGANFDTRSGNTTYTFSTSTGEMFANGQSLGKPENNTIFRTIWDGNGRDTYDFSNTGRS 325
Query: 240 KNYIDLNTESWSSIGGYEK--------------------------NMTIAQHTVIESVVG 273
++ I+L +WS + ++IE+ G
Sbjct: 326 QS-INLRPGAWSDLSADSTAQNARLKIEWGGVVTKRARGHIANALQHNDDPRSLIENAKG 384
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G+D + GN A N + + G+D G DT S ++ + I+ +
Sbjct: 385 GGGSDTIQGNIARNHLYGNVGDDRLWGWDNNDTL--DGGSEDDLLFGGRHNDILKGGPGN 442
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+D ++ + + + +G + + +E
Sbjct: 443 DILVGADPYSNTPHNEVDVLWGGADADRFVLGLASDYSVPTVGGPPANRILYDDNVVWTE 502
Query: 394 GRD 396
G++
Sbjct: 503 GQN 505
>gi|317447646|emb|CBJ55054.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 273
Score = 156 bits (393), Expect = 1e-35, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 95/270 (35%), Gaps = 37/270 (13%)
Query: 6 PVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQE 53
P YT ++ A LLR + F+ ++ N +
Sbjct: 4 PSYTVDQAATQLLRXGAAYRDFXGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQQKA 63
Query: 54 VARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEINF- 104
A A+ W+ V ++TF E + D N + P + Y +
Sbjct: 64 QAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTSWYL 123
Query: 105 -DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLTSV 162
+ + HEIGH LGL HPG YN G D Y D+ S+
Sbjct: 124 TNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRGYSL 183
Query: 163 MSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ---- 213
MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 184 MSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDTTYGFNSNTGRDF 243
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGG 238
+ +++D GG+D LD +
Sbjct: 244 LSASSNADKLVFSVWDGGGNDTLDFSGFTQ 273
>gi|238623421|emb|CAS06705.1| alkaline metalloprotease [Pseudomonas fluorescens bv. G]
Length = 277
Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats.
Identities = 62/266 (23%), Positives = 95/266 (35%), Gaps = 37/266 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 12 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 71
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V +TF E + D N + P + Y
Sbjct: 72 QKAQAVLAMQSWADVAKVTFTEKATGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 131
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 132 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 191
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 192 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYSTRASDTTYGFNSNTG 251
Query: 214 --------KDSPFIQTIYDSGGDDLL 231
+ +++D GG+D L
Sbjct: 252 RDFLSATSNADKLVFSVWDGGGNDTL 277
>gi|238623384|emb|CAS06686.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 291
Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats.
Identities = 64/279 (22%), Positives = 103/279 (36%), Gaps = 42/279 (15%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ ADHLLR+ + F+ ++ +
Sbjct: 13 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGISGFSQFSNL 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYD-----SR 97
+ A A+ W+ V ++TF E + D N + P + S
Sbjct: 73 QKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHTSG 132
Query: 98 YFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYE 154
+ + + G HEIGH LGL HPG YN G D DY
Sbjct: 133 TDGTSWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDADYG 192
Query: 155 NDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 193 QDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGF 252
Query: 210 EVQQ---------KDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ +++D GG+D LD +
Sbjct: 253 NSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFSGFTQN 291
>gi|238623408|emb|CAS06698.1| alkaline metalloprotease [Pseudomonas fluorescens bv. C]
Length = 289
Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 102/277 (36%), Gaps = 42/277 (15%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ ADHLLR+ + F+ ++ +
Sbjct: 13 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGISGFSQFSNL 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPR-----YDSR 97
+ A A+ W+ V ++TF E + D N + P S
Sbjct: 73 QKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYNTSG 132
Query: 98 YFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYE 154
+ ++ G HEIGH LGL HPG YN G D DY
Sbjct: 133 TDGTSWYLINRGYTDNINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDADYG 192
Query: 155 NDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 193 QDTRGYSVMSYWSEFNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGF 252
Query: 210 EVQQ---------KDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 253 NSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFSGFT 289
>gi|84686282|ref|ZP_01014177.1| Hemolysin-type calcium-binding toxin [Maritimibacter alkaliphilus
HTCC2654]
gi|84665809|gb|EAQ12284.1| Hemolysin-type calcium-binding toxin [Rhodobacterales bacterium
HTCC2654]
Length = 463
Score = 155 bits (391), Expect = 3e-35, Method: Composition-based stats.
Identities = 98/416 (23%), Positives = 153/416 (36%), Gaps = 39/416 (9%)
Query: 28 IRYKPDVLTTHRLSFDITE---LNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISS 84
+ Y+ +V L + + +P+ + V R+ L +++ F E S + D
Sbjct: 32 VTYQFEVSQPGDLWYSYSGWTAFSPDEKSVVRFLLETVETFLNVDFVEVSGNRDPDLNLG 91
Query: 85 ------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
+ P+Y S FD V+ I + + LHEIGHA+GL H
Sbjct: 92 KVTMFPGTAGLGGPQYSSSGTRITAFDGFAVFNNTIDLSSGRQNLILHEIGHAMGLDHTF 151
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
P Y D+ S+MSY +DA+ M D++A+Q I+GA
Sbjct: 152 EGARLDPAY--------DNLHYSLMSYDADPTPGIDATIR----MMAYDMLALQDIWGAA 199
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ G Y + + + ++DSGG D +D + G ++DL +S G E
Sbjct: 200 TYNDGATSYAGP--RLGAGKVDVVWDSGGTDWMDASAWGR-PVHLDLGEGMFSRWFGTE- 255
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+M +A +TVIE+ GS+ D VIGN N F G D+ G G DT + A + +
Sbjct: 256 DMVVAFNTVIENARGSAFADTVIGNDYANRLFGGGGGDLVRGRKGADTVYGDAQNDEVR- 314
Query: 319 YRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
A D + +R+ L +DL
Sbjct: 315 ---GGAGDDIVYGGDGNDTVKGTPGDDRVYGEAGDDLVRGGPGNDSLFGGTGSDDLRGWR 371
Query: 376 GQDVFESMKHFYEFGLSEGRDI-------TFDSYLYLGSYDDLRNVFGSDRGAAAR 424
G D + G D D+ LG +D V G AA +
Sbjct: 372 GNDRLDGGPGNDTLRGGVGDDTFVFKPGYDADTITDLGKGNDRLIVSGFGNEAAVK 427
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 47/161 (29%), Gaps = 17/161 (10%)
Query: 204 NNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ +Y + + +Y G+D + T + G +
Sbjct: 302 DTVYGDAQNDEVRGGAGDDIVYGGDGNDTVK-------------GTPGDDRVYGEAGDDL 348
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ +S+ G +G+D + G N+ GND G G DTF + I
Sbjct: 349 VRGGPGNDSLFGGTGSDDLRGWRGNDRLDGGPGNDTLRGGVGDDTFVFKPGYDADTITDL 408
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ + V+ L ++ +L
Sbjct: 409 GKGNDRLIVSGFGNEAA--VKALAVKSGSDVVIDFGGGDVL 447
>gi|294677599|ref|YP_003578214.1| M10 family peptidase [Rhodobacter capsulatus SB 1003]
gi|3128317|gb|AAC16169.1| potential outer membrane secretion protein [Rhodobacter capsulatus
SB 1003]
gi|294476419|gb|ADE85807.1| peptidase, M10 family/hemolysin-type calcium-binding repeat family
protein [Rhodobacter capsulatus SB 1003]
Length = 1028
Score = 154 bits (390), Expect = 3e-35, Method: Composition-based stats.
Identities = 116/494 (23%), Positives = 173/494 (35%), Gaps = 35/494 (7%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
+T ++ L+R + + + D T SF + + + AL WS V
Sbjct: 5 TFTEDQAVQQLIRGYFGGYTYG-WALDASRTLTYSFA-AAVTTAERALIETALDSWSAVA 62
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHNA 124
+TF + I F +S G C + + A W YG G+
Sbjct: 63 GITFVRVASGGQIGFQNSAAGAYCAMSGTGTNMVSATVNVASSWFSNYGGTLGSYSYQTY 122
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCATP 183
+HEIGHALGL H G+YN G + D Y NDS+ TSVMSYF + A+ Y TP
Sbjct: 123 VHEIGHALGLGHTGNYN-GSARFATDALYANDSWQTSVMSYFAQTDNPNTGATHAYLLTP 181
Query: 184 MVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDS-----------PFIQTIYDSGGDDLL 231
M DI A++ +YGAP GN Y D T+ D+ G D L
Sbjct: 182 MAFDIAAMRALYGAPAAVHGGNTTYGSGSTAGDGLDYLATASHRANVAFTLMDTDGIDTL 241
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + IDL + S + G NM I TVIE V +G D + GN+A N
Sbjct: 242 DFSARAEA-ARIDLTPGAISDLFGQRGNMVIYAGTVIEHVRSGAGADRITGNTAANRLAA 300
Query: 292 SSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-VER 343
+GND G +G DT + A I D + D V
Sbjct: 301 GAGNDTLAGGAGDDTLAGEAGDDRLAGEGGNDLLTGGAGADIFAFGTGFGSDTIEDLVAS 360
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + D + ++L A +++ + + D
Sbjct: 361 IDYVDLTAIAAIADWSALLALMADTATGVRIATAEGTILLSGLAIS--------MLDPTH 412
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
+L + G G T G ++ A ++ + +
Sbjct: 413 FLFAGGSGTGGGGGSGGDGLSLAGTAGRDTLLGGQGADTIDGGAGNDSITAGAGNDSVSG 472
Query: 464 QVGKDHFSNFGCEE 477
G D S ++
Sbjct: 473 GAGNDTISLQEGDD 486
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 67/400 (16%), Positives = 112/400 (28%), Gaps = 14/400 (3%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + + N+ Y T + D D G G TIL I
Sbjct: 556 AAGADVVSLGAGNDSYTGTGDAATGGDSVSGGDGNDRIETGAGVDTILGGAGRDTISAGA 615
Query: 133 GLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G G + G +D D+ T + + + S G + D
Sbjct: 616 GNDSVTGGADADRIDLGAGDDIFTDTADTGADTVLGGLGNEVLTSLGGRDSL---DGGEG 672
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
A + DSGG+DL+DL + +
Sbjct: 673 NDSLTASAAGGALQGGLGNDTLQGGAGADVAADSGGNDLVDLGAGNDSYIASGDSAGNAD 732
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G E N ++ +S+ G +G+D + GN N+ +G D +G D
Sbjct: 733 TVRGGEGNDALSGAAGADSLDGGNGDDRLTGNDGNDTILGGAGQDSITAGAGNDNV--SG 790
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ +I I D + D + E L L + +
Sbjct: 791 GAGADRIDLGAGDDIFTDTADAGADAVLGGLGNEVLTSLGGLDTLDGGAGNDRLTASDAG 850
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
L +G D + + G D+ + LG+ DD G +A
Sbjct: 851 SRLAGGLGNDTLQGGAGIDAVTDTGGNDL-----VSLGAGDDSFTATGDSAASADTISAG 905
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
G L A ++ L + G D
Sbjct: 906 AGNDRISAGAGNDLLLGEAGNDSLTAGAGNDRLTAGTGND 945
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/512 (14%), Positives = 131/512 (25%), Gaps = 23/512 (4%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T+ + + + F + + ADV G G T+ S +
Sbjct: 462 TAGAGNDSVSGGAGNDTISLQEGDDIFADGSDSGADVVWGGAGDDTLTSRGGADALHGEA 521
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G + G + G D + S ++ G + D
Sbjct: 522 GDDLLVAGPSGCVLSGGLGDDTLQGGIAPTGSATAAGADVVSLGAGNDSYTGTGDAATGG 581
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYIDL 245
G+ TI G+D + + L G + D
Sbjct: 582 DSVSGGDGNDRIETGAGVDTILGGAGRDTISAGAGNDSVTGGADADRIDLGAGDDIFTDT 641
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++ G N + +S+ G GND + ++A GND G +G D
Sbjct: 642 ADTGADTVLGGLGNEVLTSLGGRDSLDGGEGNDSLTASAAGGALQGGLGNDTLQGGAGAD 701
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSIL 362
+ L + ++ I + D + E L A L
Sbjct: 702 VAADSGGNDLVDLGAGNDSYIASGDSAGNADTVRGGEGNDALSGAAGADSLDGGNGDDRL 761
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ ++ GQD + G D + LG+ DD+ A
Sbjct: 762 TGNDGNDTILGGAGQDSITAGAGNDNVSGGAGAD-----RIDLGAGDDIFTDTADAGADA 816
Query: 423 ARHYITH-------GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ + G+ L + L + G D ++ G
Sbjct: 817 VLGGLGNEVLTSLGGLDTLDGGAGNDRLTASDAGSRLAGGLGNDTLQGGAGIDAVTDTGG 876
Query: 476 EEGRFVTFDSYLYLGSYDDLRNV-FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
+ + + + D + S R G +L A ++
Sbjct: 877 NDLVSLGAGDDSFTATGDSAASADTISAGAGNDRISAGAGNDLLLGEAGNDSLTAGAGND 936
Query: 535 DLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
L + G D F + IT
Sbjct: 937 RLTAGTGNDLMTGGLGNDVFIFATGDGADRIT 968
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 67/501 (13%), Positives = 127/501 (25%), Gaps = 32/501 (6%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ + AD G G +I + + G S G ++ +D
Sbjct: 436 GTAGRDTLLGGQGADTIDGGAGNDSITAGAGNDSVSGGAG-NDTISLQEGDDIFADGSDS 494
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
D + DA G D++ G LG++ + +
Sbjct: 495 GADVVWGGAGDDTLTSRGGADALHGEAG----DDLLVAGPSGCVLSGGLGDDTLQGGIAP 550
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
S G D++ L S+ G + N I +++++G
Sbjct: 551 TGSATA------AGADVVSLGAGNDSYTGTGDAATGGDSVSGGDGNDRIETGAGVDTILG 604
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD-ANE 332
+G D + + N+ + D D +G D F A + + ++
Sbjct: 605 GAGRDTISAGAGNDSVTGGADADRIDLGAGDDIFTDTADTGADTVLGGLGNEVLTSLGGR 664
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D + L + L+ A + G D+ + + S
Sbjct: 665 DSLDGGEGNDSLTASAAGGALQGGLGNDTLQGGAGADVAADSGGNDLVDLGAGNDSYIAS 724
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
D+ D L G+D +G + A + D
Sbjct: 725 GDSAGNADTVRGGEGNDALSGAAGADSLDGGNGDDRLTGNDGNDTILGGAGQ------DS 778
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
I A A ++ + G + F L N + G
Sbjct: 779 ITAGAGNDNVSGGAGADRIDLGAGDDIFTDTADAGADAVLGGLGNEVLTSLG-------- 830
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE-----EGRSITF 567
G+ L + L + AG D ++ G +F
Sbjct: 831 -GLDTLDGGAGNDRLTASDAGSRLAGGLGNDTLQGGAGIDAVTDTGGNDLVSLGAGDDSF 889
Query: 568 NPDLYLTSYDDLWNVFGSDRS 588
+ D + +
Sbjct: 890 TATGDSAASADTISAGAGNDR 910
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/254 (16%), Positives = 79/254 (31%), Gaps = 11/254 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ S + + D D G G+ +I + + G
Sbjct: 736 GGEGNDALSGAAGADSLDGGNGDDRLTGNDGNDTILGGAGQDSITAGAGNDNVSGGAGAD 795
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G ++ D D+ L + + + +D G ++ A ++
Sbjct: 796 -RIDLGAGDDIFTDTADAGADAVLGGLGNEVLTSLGGLDTLDGGAGNDRLTASDAGSRLA 854
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + I + D+GG+DL+ L + S +I
Sbjct: 855 GG----------LGNDTLQGGAGIDAVTDTGGNDLVSLGAGDDSFTATGDSAASADTISA 904
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N I+ + ++G +GND + + N+ +GND+ G G D F +
Sbjct: 905 GAGNDRISAGAGNDLLLGEAGNDSLTAGAGNDRLTAGTGNDLMTGGLGNDVFIFATGDGA 964
Query: 316 YKIYRFENAIIVYD 329
+I F + D
Sbjct: 965 DRITDFRIGVDDID 978
>gi|238623380|emb|CAS06684.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 290
Score = 154 bits (389), Expect = 4e-35, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 103/278 (37%), Gaps = 42/278 (15%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ ADHLLR+ + F+ ++ +
Sbjct: 13 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGISGFSQFSNL 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYD-----SR 97
+ A A+ W+ V ++TF E + D N + P + S
Sbjct: 73 QKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHTSG 132
Query: 98 YFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYE 154
+ + + G HEIGH LGL HPG YN G D DY
Sbjct: 133 TDGTSWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYRDADYG 192
Query: 155 NDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 193 QDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGF 252
Query: 210 EVQQ---------KDSPFIQTIYDSGGDDLLDLTLIGG 238
+ +++D GG+D LD +
Sbjct: 253 NSNTGRDHLSATSNADKLVFSVWDGGGNDTLDFSGFTQ 290
>gi|317447648|emb|CBJ55055.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 276
Score = 154 bits (388), Expect = 5e-35, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 86/240 (35%), Gaps = 28/240 (11%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 13 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 73 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 132
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 133 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 192
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK 214
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 193 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANLSTRATDTTYGFNSNTG 252
>gi|288958308|ref|YP_003448649.1| hypothetical protein AZL_014670 [Azospirillum sp. B510]
gi|288910616|dbj|BAI72105.1| hypothetical protein AZL_014670 [Azospirillum sp. B510]
Length = 394
Score = 154 bits (388), Expect = 6e-35, Method: Composition-based stats.
Identities = 100/366 (27%), Positives = 157/366 (42%), Gaps = 12/366 (3%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
S + + T ++ ++V GA GN +Y I I
Sbjct: 10 SAVNTDNIYISDLLFSQITNTTNNFISVNYGGGATTEFYGNFVYNSTGSSVVGGTITAIR 69
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG-----YEKNMTIAQHTVIESVVGSSGND 278
L + L S S + + +++ G SGND
Sbjct: 70 SLSNGTLSYTIDDLSIPATTFLGWLSSSRNDTARSTILSGSDIMYGSDFNDTIRGYSGND 129
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G +++ +GN+ DG SG DT ++ + + + ++ VYD + D L
Sbjct: 130 TIFGGGGSDLLDGGAGNNYIDGGSGDDTVQRHSTAASSTTFSYGGSVYVYD--SNGYDQL 187
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ VE +RF D+ + + V + Y A+ DL G + ++ H+ G+ E R +T
Sbjct: 188 TGVEYIRFTDRTVATSGVSAFDPMSYLAANSDLAAAFGANRTAALNHYLNSGIRERRSVT 247
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
FD+ YL + DL FG++ AA +HYIT+G E RN F A+ YIA++ DLI AF
Sbjct: 248 FDAASYLAANQDLAAAFGANTEAATQHYITNGRLENRN-TTFNAMSYIAANPDLIQAFG- 305
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS-DRGAAARHYITHGVKE 517
H++ G E R V F++ YL Y DLR+ GS + AA HYI G +E
Sbjct: 306 --TNTTAAALHYATVGRLENRSVNFNATAYLARYSDLRSALGSQNEAAATTHYILSGFRE 363
Query: 518 GRNPDA 523
GR+
Sbjct: 364 GRSGAP 369
Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats.
Identities = 79/303 (26%), Positives = 115/303 (37%), Gaps = 9/303 (2%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T Y F + + + LS + + +D +
Sbjct: 75 TLSYTIDDLSIPATTFLGWLSSSRNDTARSTILSGSDIMYGSDFNDTIRGYSGNDTIFGG 134
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ L G + + + Y N + G
Sbjct: 135 GGSDLLDGGAGNNYIDGGSGDDTVQRHSTAASSTTFSYGGSVYVYDSNGYDQLTGVEYIR 194
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ V AF + Y+A++ DL AF +H+ N G E R VTFD+
Sbjct: 195 FTDRTVAT-SGVSAFDPMSYLAANSDLAAAFGAN---RTAALNHYLNSGIRERRSVTFDA 250
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
YL + DL FG++ AA +HYIT+G E RN F A+ YIA++ DLI AF
Sbjct: 251 ASYLAANQDLAAAFGANTEAATQHYITNGRLENRNTT-FNAMSYIAANPDLIQAFGTNT- 308
Query: 546 LVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGS-DRSAAAQHYITHGMKEGRA 604
A H++ G E RS+ FN YL Y DL + GS + +AA HYI G +EGR+
Sbjct: 309 --TAAALHYATVGRLENRSVNFNATAYLARYSDLRSALGSQNEAAATTHYILSGFREGRS 366
Query: 605 LGI 607
Sbjct: 367 GAP 369
Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats.
Identities = 65/317 (20%), Positives = 109/317 (34%), Gaps = 13/317 (4%)
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
Y +Y + +V + + D I + + I
Sbjct: 47 FYGNFVYNSTGSSVVGGTITAIRSLSNGTLSYTIDDLSIPATTFLGWLSSSRNDTARSTI 106
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+ G D+ G D F N + D G+ H
Sbjct: 107 -LSGSDIMYGSDFNDTIRGYSGNDTIFGGGGSDLLDGGAGNNY-IDGGSGDDTVQRHSTA 164
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
++ Y+ L V F++ FD YL +
Sbjct: 165 ASSTTFSYGGSVYVYDSNGYDQ-------LTGVEYIRFTDRTVATSGVSAFDPMSYLAAN 217
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
DL FG++R AA HY+ G++E R+ F A Y+A+++DL AF +A
Sbjct: 218 SDLAAAFGANRTAALNHYLNSGIRERRSVT-FDAASYLAANQDLAAAFGANT---EAATQ 273
Query: 553 HFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQF 612
H+ G E R+ TFN Y+ + DL FG++ +AAA HY T G E R++ + +
Sbjct: 274 HYITNGRLENRNTTFNAMSYIAANPDLIQAFGTNTTAAALHYATVGRLENRSVNFNATAY 333
Query: 613 KSVMNLSEKSRDKADLS 629
+ + + + +
Sbjct: 334 LARYSDLRSALGSQNEA 350
>gi|119489451|ref|ZP_01622231.1| Peptidase M10A and M12B, matrixin and adamalysin [Lyngbya sp. PCC
8106]
gi|119454724|gb|EAW35870.1| Peptidase M10A and M12B, matrixin and adamalysin [Lyngbya sp. PCC
8106]
Length = 594
Score = 153 bits (386), Expect = 9e-35, Method: Composition-based stats.
Identities = 103/534 (19%), Positives = 170/534 (31%), Gaps = 49/534 (9%)
Query: 43 DITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI 102
+ + + +A + W +V + F + I +F
Sbjct: 15 NFIAFSADQITIAEQSFQLWEEVSGIDFVPVADTGAGGQIRLGARTDLIGNGAYAHFPGN 74
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN-GGYPVYGVDNDYENDSFLTS 161
N D+W +HEIGHA+GL HPG+Y+ G D+ +
Sbjct: 75 NAGDGDIWF---DPNWNNLQAMIHEIGHAVGLKHPGNYDSTGNLPPPPFLPSSEDNKQYT 131
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQ 220
VM+Y S +TPM+ DI A+Q +YGA GN+ Y F++
Sbjct: 132 VMAYPAHP-----GSGVESSTPMLYDIAAIQYLYGANTTTRTGNDTYSWNPNT---AFVE 183
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--------YEKNMTIAQHTVIESVV 272
TI+D+GG D +D IDL ++SSIG N+ IA IE+ V
Sbjct: 184 TIWDAGGIDTIDAGNQTLDAA-IDLTAGAFSSIGPRSNGSNTPASNNLAIAYDVTIENAV 242
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G SG+D + GN+A+N G+D G G DT + + + + +Y E
Sbjct: 243 GGSGDDELRGNTASNDLQGGGGDDYLFGDDGTDTL--DGETGNDFLVGWNGSDTLY--GE 298
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D L + + L + L G D +
Sbjct: 299 VGNDTLWA------GNGDDQAYGGDGDDQLAGWNGNDYLDGENGNDRVDGEYDNDTLFGG 352
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
G D + + + + A Y G + L + L
Sbjct: 353 FGTDTLYGGDGDDRLDSGTPSAYDN---ANEELYGEAGNDYLLAGNGEDYLHGGDGTDTL 409
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
+ + G D + + +G D +
Sbjct: 410 YGRSGNDFLVGWNGSDTMYGEVGNDTLWAGNGDD----------QAYGGDGDDQLAGWNG 459
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ EG + L ++ LI + + + G+EE ++T
Sbjct: 460 NDYLEG--ENGNDELIADTGNDVLIGGNGNDTLTGSMPSE--LDSGFEELDTLT 509
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/401 (13%), Positives = 106/401 (26%), Gaps = 11/401 (2%)
Query: 22 YWSNYFIRYKPDVLTTHRLS-FDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIK 80
Y +N R D + + + F T + + +DLT S
Sbjct: 160 YGANTTTRTGNDTYSWNPNTAFVETIWDAGGIDTIDAGNQTLDAAIDLTAGAFSSIGPRS 219
Query: 81 FISSNNGYVCT-PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
S+ YD + D R + + G
Sbjct: 220 NGSNTPASNNLAIAYDVTIENAVGGSGDDELRGNTASNDLQGGGGDDYLFGDDGTDTLDG 279
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
G + G + D+ V + + + D ++G ++ + G
Sbjct: 280 ETGNDFLVGWNGS---DTLYGEVGNDTLWAGNGDDQAYGGDGDDQLAGWNGNDYLDGENG 336
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD--LTLIGGVKNYIDLNTESWSSIGGYE 257
+ Y T+Y GDD LD N +
Sbjct: 337 NDRVDGEYD-NDTLFGGFGTDTLYGGDGDDRLDSGTPSAYDNANEELYGEAGNDYLLAGN 395
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ +++ G SGND ++G + ++ + GND +G D + +
Sbjct: 396 GEDYLHGGDGTDTLYGRSGNDFLVGWNGSDTMYGEVGNDTLWAGNGDDQAY--GGDGDDQ 453
Query: 318 IYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + + + + + L + + + L G
Sbjct: 454 LAGWNGNDYLEGENGNDELIADTGNDVLIGGNGNDTLTGSMPSELDSGFEELDTLTGGDG 513
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
D F F ++G + + D VFGS
Sbjct: 514 ADTFVLGNSVEAFYNNDGFGGYAQITDFNWAEGDKFQVFGS 554
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 50/367 (13%), Positives = 95/367 (25%), Gaps = 25/367 (6%)
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI-DSVN 355
+ G+DT + I A + + + D I ++V
Sbjct: 184 TIWDAGGIDTIDAGNQTLDAAIDLTAGAFSSIGPRSNGSNTPASNNLAIAYDVTIENAVG 243
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
L + DL G D G D Y ++ N
Sbjct: 244 GSGDDELRGNTASNDLQGGGGDDYLFGDDGTDTLDGETGNDFLVGWNGSDTLYGEVGNDT 303
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ Y G + + L+ ++ + + + G D G
Sbjct: 304 LWAGNGDDQAYGGDGDDQLAGWNGNDYLDGENGNDRVDGEYDNDTLFGGFGTDTLY-GGD 362
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
+ R + Y + ++L G+D A +G D L + ++
Sbjct: 363 GDDRLDSGTPSAYDNANEELYGEAGNDYLLA-----GNGEDYLHGGDGTDTLYGRSGNDF 417
Query: 536 LINAFADAPDLVQAGKDHFSN-------FGYEEGRSIT-FNPDLYLTS---YDDLWNVFG 584
L+ + G D +G + + +N + YL D+L G
Sbjct: 418 LVGWNGSDTMYGEVGNDTLWAGNGDDQAYGGDGDDQLAGWNGNDYLEGENGNDELIADTG 477
Query: 585 SDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYF 644
+D + G G + S + V+ + +
Sbjct: 478 NDV-------LIGGNGNDTLTGSMPSELDSGFEELDTLTGGDGADTFVLGNSVEAFYNND 530
Query: 645 GDGNYYD 651
G G Y
Sbjct: 531 GFGGYAQ 537
>gi|317447663|emb|CBJ55063.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 265
Score = 153 bits (386), Expect = 1e-34, Method: Composition-based stats.
Identities = 64/246 (26%), Positives = 94/246 (38%), Gaps = 28/246 (11%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP TT++ AD L R W + F+ P T L ++ +
Sbjct: 15 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLG-TFSQFSSL 73
Query: 51 AQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFME 101
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 74 QKEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGESW 133
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 134 YLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRAY 193
Query: 161 SVMSYFMPQDSM----MDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKD 215
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 194 SVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRSGDTVYGFNSTADR 253
Query: 216 SPFIQT 221
+ T
Sbjct: 254 DYYSAT 259
>gi|227823260|ref|YP_002827232.1| hypothetical protein NGR_c27300 [Sinorhizobium fredii NGR234]
gi|227342261|gb|ACP26479.1| hypothetical protein NGR_c27300 [Sinorhizobium fredii NGR234]
Length = 607
Score = 153 bits (385), Expect = 1e-34, Method: Composition-based stats.
Identities = 82/487 (16%), Positives = 154/487 (31%), Gaps = 35/487 (7%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE 72
+ D ++ W++ + + + D ++ R + + +++TF E
Sbjct: 15 VTDGVIGGYAWTSKTLTFGFTKQDIDKNGIDDFAEGDW-KDFYREMFADIAACINVTFRE 73
Query: 73 TSIHSDIKF---ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA----L 125
T+I ++ + G + D I L
Sbjct: 74 TTI-ANATLKQTLLDTGGGGFSGGPGPTEDTVTTAVGIDPKSVKSAADIIRLGTFSDVWL 132
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYE-----NDSFLTSVMSYFMPQDSMMD------ 174
HEI H+LGL H G + GV ++ + +S + SVM Y +
Sbjct: 133 HEIAHSLGLKHTHDSIAGPTLPGVVDEDDKGTGLLNSSIYSVMGYTYAFWGEDNPFTQAR 192
Query: 175 ----ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL 230
+ DI A+Q +YGA + GN++Y+ + T++D+GG+D
Sbjct: 193 DFGTTLNAQPGSLGAIDIAALQHMYGAKAHNTGNDLYRFSDNVDFNRGYTTLWDTGGNDT 252
Query: 231 LDLTLIGGVKNYI-------DLNTESW-SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ T K + ++ W S+ TIA VIE+ G D++IG
Sbjct: 253 IAYTGTSRAKIDLRAATLKAEIGGGGWLSTSETLTGGFTIANGVVIENAKGGPAADILIG 312
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N+ NV G D G +G D + + ++ +A + ++VE
Sbjct: 313 NAVGNVLDGGRGADQLHGLAGNDIYVVD--NVGDRVSEAASAGTDLVKSSVSFALGANVE 370
Query: 343 RLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
L ++ + L A+ + G D + + G D
Sbjct: 371 NLLLTGNLAVNGTGNGLANRLTGNAAANVMSGAAGNDTLDGGQGADSLTGGTGNDTYVVD 430
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
++ R + + + A + A + A
Sbjct: 431 NKGDKVIEEANAGTDIVRSSISLALAANVENLVLTGSASIGGKGNALSNTITGNAAANTL 490
Query: 462 LVQVGKD 468
G D
Sbjct: 491 DGGAGGD 497
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/368 (12%), Positives = 86/368 (23%), Gaps = 22/368 (5%)
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ + G + G DT Y S R LS E L
Sbjct: 233 DNVDFNRGYTTLWDTGGNDTIAYTGTSRAKIDLRAATLKAEIGGGGW----LSTSETLT- 287
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
N + + + LI +V + + + G DI +
Sbjct: 288 --GGFTIANGVVIENAKGGPAADILIGNAVGNVLDGGRGADQLHGLAGNDIYVVDNVGDR 345
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ + + + + + L A G
Sbjct: 346 VSEAASAGTDLVKSSVSFALGANVENLLLTGNLAVNGTGNGLANRLTGNAAANVMSGAAG 405
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLR----NVFGSDRGAAARHYITHGVKEGRNPD 522
D + + Y+ + G+D ++ E
Sbjct: 406 NDTLDGGQGADSLTGGTGNDTYVVDNKGDKVIEEANAGTDIVRSSISLALAANVENLVLT 465
Query: 523 AFKALEY--IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLW 580
++ A + A AG D G F+ L ++ D +
Sbjct: 466 GSASIGGKGNALSNTITGNAAANTLDGGAGGD--LLSGNAGKDQFAFSTALGASNVDHIR 523
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLY 640
+ D + I + G + FK ++ A L +D L+
Sbjct: 524 DFSAIDDTIVLSSKIFAALTPG---TLPAGLFKD----LTAAKVDASDRLLYDRDTGVLF 576
Query: 641 TDYFGDGN 648
D G G
Sbjct: 577 YDADGSGA 584
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 62/243 (25%), Gaps = 11/243 (4%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
S T AD+ + ++ H L +
Sbjct: 282 TSETLTGGFTIANGVVIENAKGGPAADILIGNAVGNVLDGGRGADQL-HGLAGNDIYVVD 340
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
D +SV + + + +A + A
Sbjct: 341 NVGDRVSEAASAGTDLVKSSVSFALGANVENLLLTGNLAVN-GTGNGLANRLTGNAAANV 399
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG------VKNYIDLNTESWSSIGG 255
+ ++ G+D + G + + ++
Sbjct: 400 MSGAA--GNDTLDGGQGADSLTGGTGNDTYVVDNKGDKVIEEANAGTDIVRSSISLALAA 457
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+N+ + I G++ ++ + GN+A N +G D+ G++G D F +
Sbjct: 458 NVENLVLTGSASIG-GKGNALSNTITGNAAANTLDGGAGGDLLSGNAGKDQFAFSTALGA 516
Query: 316 YKI 318
+
Sbjct: 517 SNV 519
>gi|238623386|emb|CAS06687.1| alkaline metalloprotease [Pseudomonas sp. W17a]
Length = 277
Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats.
Identities = 62/272 (22%), Positives = 99/272 (36%), Gaps = 37/272 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ A LLRD + F+ ++ +
Sbjct: 6 NGKPSFSVDQAATQLLRDGAAYQDKDGSGKIELTYTFLTSASSSTMNKHGISGFSQFSTQ 65
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
Q A+ A+ W+ V ++TF E + D N + P + Y
Sbjct: 66 QQTQAKLAMQSWADVANVTFTEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGNGYDGTS 125
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + HEIGH+LGL HPG YN G D Y D+
Sbjct: 126 WYLINSGYTQNKNPDLNNYGRQTLTHEIGHSLGLAHPGDYNAGNGNPTYNDASYGQDTRG 185
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 186 YSVMSYWSESNTNQNFSKGGVEAYSSGPLMDDIAAIQKLYGANMNTRTGDTTYGFNSNAG 245
Query: 213 -------QKDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D+GG D D +
Sbjct: 246 RDFLSASSSSDKLVFSVWDAGGKDTFDFSGFT 277
>gi|254000477|ref|YP_003052540.1| Serralysin [Methylovorus sp. SIP3-4]
gi|253987156|gb|ACT52013.1| Serralysin [Methylovorus sp. SIP3-4]
Length = 559
Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats.
Identities = 101/461 (21%), Positives = 157/461 (34%), Gaps = 42/461 (9%)
Query: 29 RYKPDVLTTHRLSFDITELNPN--AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN- 85
L ++ + L N + AR AL W LTF + S +I ++
Sbjct: 21 DTASASLGKTTITVSLAGLTDNSQQEAAARHALEAWEDATGLTFTIVTSGSADIYIGNDD 80
Query: 86 ----NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
Y + N+ G+ +HEIGH LGL H G YN
Sbjct: 81 ALGEGAYAYEENDARYINVSENWMDGFPADEQWSVGSYGVQTFIHEIGHTLGLGHGGPYN 140
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G Y D + D+ S+MSYF + AS + +PM++DI A++ +YG +
Sbjct: 141 -GNGSYAKDAIFALDTNQYSIMSYFDQSN-YGGASNLFLLSPMMADIAAIRLLYGNLATN 198
Query: 202 LGNNIYKIEVQQKDSP--------FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G+ +Y + + +TI DS G D +D + + + ID+ +SSI
Sbjct: 199 TGDTLYGLGETVLGGTSDMGSYAGYARTISDSDGTDTMDFSNVSRG-SVIDMRAGGFSSI 257
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL--------- 304
GY+KN IAQ T IE++ + G D V GN A+N+ + SGND +G
Sbjct: 258 NGYKKNFAIAQDTTIENLNATLGRDTVTGNDADNLIYGLSGNDKISSGAGNDTLDGGLGG 317
Query: 305 -------DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC---IDSV 354
YY S I + S +E + + +
Sbjct: 318 DTLTGGLGDDVYYINSSKDVISEKADGGTDVVYASVSYTMASYLEEVVLQGSASTKLKAT 377
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----FDSYLYLGSYD 409
+ + L G D G D D D
Sbjct: 378 GNAMANQITGDDGANVLNGGAGNDTLAGGLGRDTLAGGTGNDSLDGGDANDKLDGGAGDD 437
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
L G+D +++G + D Y +
Sbjct: 438 TLVGGAGNDLLKGGAGSDIFIIEDGTDHDIISDFAYSSKTS 478
>gi|16264732|ref|NP_437524.1| putative outer membrane secretion protein [Sinorhizobium meliloti
1021]
gi|15140870|emb|CAC49384.1| putative hemolysin-adenlyate cyclase protein [Sinorhizobium
meliloti 1021]
Length = 1112
Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats.
Identities = 120/620 (19%), Positives = 188/620 (30%), Gaps = 82/620 (13%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIH------ 76
R + L ++ ELN P + A AL W+ V L FE
Sbjct: 36 GALPRSLTPEMAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVDDTPFDSTT 95
Query: 77 -SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
Y S ++ I D G + + +HE GH GL
Sbjct: 96 DWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLN 155
Query: 136 HPGSYNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
HPG YN P Y + + D SVMSYF D + S +TP+++DI A
Sbjct: 156 HPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVG-ETSRWSASTPLMADIEA 214
Query: 191 VQK------------IYGAPKGSLGNNIYKIEVQQKDS---------PFIQTIYDSGGDD 229
V + Y + G+N+Y Q I+D+GG D
Sbjct: 215 VIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGVD 274
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-------AQHTVIESVVGSSGNDVVIG 282
+D + +DL +SS+ G+ N++I A IE+ +GS +D++IG
Sbjct: 275 TIDFSG-STAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDILIG 333
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-KQDFLSDV 341
N N SG D G+ G DT+F + + + V + + K +++V
Sbjct: 334 NDGANTLDGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANV 393
Query: 342 ERLRFADQCIDSVNVKQRSILEYTAS--YEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
E + +AD+ S + + G D + G D+
Sbjct: 394 ENIIYADESTTQPGGGGASPPSAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGKGGDDLII 453
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
L S D + D G + ++ L D
Sbjct: 454 GGRDSLASRDINNTIDVEDLEDQTES--DDGNDTLYGGGGNDTILGGQGNDILDGGAGDD 511
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
Q G D F + + +S L G H I + +
Sbjct: 512 VLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFHSIENLIGSDD 571
Query: 520 NPDAF---------------------------------KALEYIASHEDLINAFADAPDL 546
D F L A ++ +I
Sbjct: 572 RIDRFIGTSAANHFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLD 631
Query: 547 VQAGKDHFSNFGYEEGRSIT 566
+G D G +G +I
Sbjct: 632 GGSGIDTVVYAGSPDGVTID 651
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 80/631 (12%), Positives = 142/631 (22%), Gaps = 76/631 (12%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH------E 127
+ D G T + DV G + E
Sbjct: 477 TESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDVLSGQDGVDIFRGGAGVDTVDFSKE 536
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
L + + G G + + S + +G +
Sbjct: 537 SPFQLLVNLATNVASGGTASGDTFHSIENLIGSDDRIDRFIGTSAANHFWGQGGGDYFNG 596
Query: 188 IVAVQKIYGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ G G+ +Y + G D + IDL
Sbjct: 597 GGGNDILDGGND---GDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYAG-SPDGVTIDL 652
Query: 246 NTESWSSIGGYEKNMTIAQHTVI--------ESVVGSSGNDVVIGNSANNVFFESSGN-- 295
+ S G + + VI E+ GSS +D +IGN+ N +G+
Sbjct: 653 ANGTASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDT 712
Query: 296 -------DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
D +G +G DT Y + ++ D +E L +
Sbjct: 713 LTGGGGADRLNGGAGSDTADYADATSGVRLS--------LAGGRSGGDTYVSIENLAGSG 764
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--------------MKHFYEFG---- 390
++L + + G D + G
Sbjct: 765 FGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAPPRPGMGSGYATLGPDAA 824
Query: 391 -------LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ + S + + + + G Y + G
Sbjct: 825 NNSIAAAFDISNNFSLTSDPDIFDSTTILHTTVNATGNGRGGYYKIDLAAGTVITIDIDG 884
Query: 444 EYIASHEDL-INAFADAPDLVQVGKDHFSNFGCEEGRFVTF------DSYLYLGSYDDLR 496
+ D + A ++V D + G R + Y+
Sbjct: 885 IADPNVHDSWVRLLDSAGNIVAQNDDGGGDPGSTSNRDSSLVFVAQETGTYYILEGSWSP 944
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
G A T+ + A +A + LI D +
Sbjct: 945 TAPGEGWAEAVPAGSTYELNVSVEFPPQPAQPGVAGSDTLIGGGGSDLLDGGLAAD--TL 1002
Query: 557 FGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM 616
G + F+ L D F + G ++ F
Sbjct: 1003 TGGAGEDTFRFSTALG-NGNVDWIKDFNVIDDTILLDNLIF-ESVGGEGALALGAFYGSA 1060
Query: 617 NLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
AD + +D L D G G
Sbjct: 1061 G---GVAHDADDRIIYDADSGVLSYDADGAG 1088
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 61/444 (13%), Positives = 110/444 (24%), Gaps = 13/444 (2%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEI--NFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+D G P I + D G G TI I
Sbjct: 399 ADESTTQPGGGGASPPSAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGKGGDDLIIGGRDS 458
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ N V +++ E+D ++ + D+++ Q
Sbjct: 459 LASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDVLSGQDG 518
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFI--QTIYDSGGDDLLDLT----LIGGVKNYID--LN 246
+G G + + + T SGG D + G + ID +
Sbjct: 519 VDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFHSIENLIGSDDRIDRFIG 578
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T + + G + + G + D++ G + N+ +G D DG SG+DT
Sbjct: 579 TSAANHFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDT 638
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-VERLRFADQCIDSVNVKQRSILEYT 365
Y I D + Q V R ++ L
Sbjct: 639 VVYAGSPDGVTIDLANGTASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGN 698
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSYDDLRNVFGSDRGAAAR 424
A +L G D G D + G D +
Sbjct: 699 ALANELSGGAGDDTLTGGGGADRLNGGAGSDTADYADATSGVRLSLAGGRSGGDTYVSIE 758
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ G + + + D I+ L+ G +
Sbjct: 759 NLAGSGFGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAP-PRPGMGSGYA 817
Query: 485 SYLYLGSYDDLRNVFGSDRGAAAR 508
+ + + + F +
Sbjct: 818 TLGPDAANNSIAAAFDISNNFSLT 841
>gi|238623354|emb|CAS06671.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 250
Score = 151 bits (380), Expect = 5e-34, Method: Composition-based stats.
Identities = 61/243 (25%), Positives = 94/243 (38%), Gaps = 25/243 (10%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE--TSIHSDIK 80
+ F+ P T L ++ + +E A+ +L W+ V +TF E + D
Sbjct: 9 LTYTFLTAPPVGYATRGLG-TFSQFSSLQKEQAKLSLESWADVAKVTFTEGPAARGGDGH 67
Query: 81 FISSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+N + P + +K G+G HEIGH LG
Sbjct: 68 MTFANFSASNGGAAFAYLPSSARKGESWYLINKDYAVNKTPGEGNYGRQTLTHEIGHTLG 127
Query: 134 LMHPGSYNGGY-PVYGVDNDYENDSFLTSVMSYFMPQDSM----MDASFGYCATPMVSDI 188
L HPG YN G D Y D+ SVMSY+ ++ Y + P++ DI
Sbjct: 128 LSHPGDYNAGNGNPTYRDAVYGEDTRAYSVMSYWSESNTGQHFTNSGEGAYASAPLLDDI 187
Query: 189 VAVQKIYGAP-KGSLGNNIYKIEV---------QQKDSPFIQTIYDSGGDDLLDLTLIGG 238
AVQK+YGA + G+ +Y S I +++D GG+D LD +
Sbjct: 188 AAVQKLYGANLETRAGDTVYGFNSTADRDYYSATSASSKLIFSVWDGGGNDTLDFSGFTQ 247
Query: 239 VKN 241
+
Sbjct: 248 NQK 250
>gi|238623350|emb|CAS06669.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 254
Score = 150 bits (379), Expect = 7e-34, Method: Composition-based stats.
Identities = 63/237 (26%), Positives = 92/237 (38%), Gaps = 28/237 (11%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP TT++ AD L R W + F+ P T L ++ +
Sbjct: 12 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLG-TFSQFSSL 70
Query: 51 AQEVARWALGEWSKVVDLTFEETSI--HSDIKFISSN-------NGYVCTPRYDSRYFME 101
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 71 QKEQAKLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSSRKGESW 130
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 131 YLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRAY 190
Query: 161 SVMSYFMPQDSM----MDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 191 SVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNST 247
>gi|307315398|ref|ZP_07594966.1| Peptidase M10 serralysin [Sinorhizobium meliloti BL225C]
gi|306898818|gb|EFN29473.1| Peptidase M10 serralysin [Sinorhizobium meliloti BL225C]
Length = 1112
Score = 150 bits (378), Expect = 9e-34, Method: Composition-based stats.
Identities = 120/620 (19%), Positives = 188/620 (30%), Gaps = 82/620 (13%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIH------ 76
R + L ++ ELN P + A AL W+ V L FE
Sbjct: 36 GALPRSLTPEMAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVDDTPFDSTT 95
Query: 77 -SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
Y S ++ I D G + + +HE GH GL
Sbjct: 96 DWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLN 155
Query: 136 HPGSYNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
HPG YN P Y + + D SVMSYF D + S +TP+++DI A
Sbjct: 156 HPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVG-ETSRWSASTPLMADIEA 214
Query: 191 VQK------------IYGAPKGSLGNNIYKIEVQQKDS---------PFIQTIYDSGGDD 229
V + Y + G+N+Y Q I+D+GG D
Sbjct: 215 VIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGVD 274
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-------AQHTVIESVVGSSGNDVVIG 282
+D + +DL +SS+ G+ N++I A IE+ +GS +D++IG
Sbjct: 275 TIDFSG-STAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDILIG 333
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-KQDFLSDV 341
N N SG D G+ G DT+F + + + V + + K +++V
Sbjct: 334 NDGANTLDGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANV 393
Query: 342 ERLRFADQCIDSVNVKQRSILEYTAS--YEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
E + +AD+ S + + G D + G D+
Sbjct: 394 ENIIYADESTTQPGGGGASPPIAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGKGGDDLII 453
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
L S D + D G + ++ L D
Sbjct: 454 GGRDSLASRDINNTIDVEDLEDQTES--DDGNDTLYGGGGNDTILGGQGNDILDGGAGDD 511
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
Q G D F + + +S L G H I + +
Sbjct: 512 VLSGQDGADIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFHSIENLIGSDD 571
Query: 520 NPDAF---------------------------------KALEYIASHEDLINAFADAPDL 546
D F L A ++ +I
Sbjct: 572 RIDRFIGTSAANHFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLD 631
Query: 547 VQAGKDHFSNFGYEEGRSIT 566
+G D G +G +I
Sbjct: 632 GGSGIDTVVYAGSPDGVTID 651
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 75/486 (15%), Positives = 122/486 (25%), Gaps = 52/486 (10%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D G T + + NGG + +
Sbjct: 333 GNDGANTLDGRSGGDRMAGNGGDDTYFVDSLEDIVR--------EEANGGNDTVILLSRN 384
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ +V + +S G + P+ D I+G
Sbjct: 385 LKIRKIANVENIIYADESTTQPGGGGASPPIAGDNTMTSIIFGGN----------GNDTL 434
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN---TESWSSIGGYEKNMTIAQHTVIES 270
TI+ GGDDL+ I+ + + N T+ ++
Sbjct: 435 DGGAGDDTIFGKGGDDLIIGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDT 494
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G GND++ G + ++V G D+F G +G+DT + S + V
Sbjct: 495 ILGGQGNDILDGGAGDDVLSGQDGADIFRGGAGVDTVDFSKESPFQLLVNLATN--VASG 552
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQ-------------------RSILEYTASYEDL 371
D +E L +D ID IL+ + L
Sbjct: 553 GTASGDTFHSIENLIGSDDRIDRFIGTSAANHFWGQGGGDYFNGGGGNDILDGGNDGDIL 612
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN--VFGSDRGAAARHYITH 429
G D G D + G DL N G D +
Sbjct: 613 YGEAGNDTVIGGAGQDYLDGGSGIDTVVYAGSPDGVTIDLANGTASGGDGDGPVQIVGRG 672
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE----GRFVTFDS 485
V F+ + + LI G D + G + G
Sbjct: 673 AVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNGGAGSDTAD 732
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYIT-HGVKEGRNPDAFKALEYIA---SHEDLINAFA 541
Y S L G G G G A + ++ +
Sbjct: 733 YADATSGVRLSLAGGRSGGDTYVSIENLAGSGFGDRLTGNGAANVLTGQGGNDTIDGGRG 792
Query: 542 DAPDLV 547
D L
Sbjct: 793 DDTLLG 798
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 77/555 (13%), Positives = 121/555 (21%), Gaps = 70/555 (12%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + D G G+ + + + + +A G + +
Sbjct: 604 DGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYA-------GSPDGVTIDLANGT 656
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
V D G+ S + A + S G +
Sbjct: 657 ASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGG----AGDDT 712
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ G D D S GG T + IE++
Sbjct: 713 LTGGGGADRLNGGAGSDTADYADATSGVRL--------SLAGGRSGGDT---YVSIENLA 761
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS D + GN A NV GND DG G DT R
Sbjct: 762 GSGFGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAPPRPGMGSGYATLGP 821
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D +S+ ++ L ++ H
Sbjct: 822 ---------------DAANNSIAAAFD-----ISNNFSLTSDPDIFDSTTILHTTVNATG 861
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
GR G Y + G+ V + A +A ++D
Sbjct: 862 NGR----------GGYYKIDLAAGTVITIDIDGIADPNVHDSWVRLLDSAGNIVAQNDD- 910
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
P E G Y+ G A T
Sbjct: 911 ---GGGDPGSTSNRDSSLVFVAQETG-------TYYILEGSWSPTAPGDGWAEAVPAGST 960
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLY 572
+ + A +A + LI D + G + F+ L
Sbjct: 961 YELNVSVEFPPQPAQPGVAGSDTLIGGGGSDLLDGGLAAD--TLTGGAGEDTFRFSTALG 1018
Query: 573 LTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSF 632
D F + G ++ F AD + +
Sbjct: 1019 -NGNVDWIKDFNVIDDTILLDNLIF-ESVGGEGALALGAFYGSAG---GVAHDADDRIIY 1073
Query: 633 DHKKVDLYTDYFGDG 647
D L D G G
Sbjct: 1074 DADSGVLSYDADGAG 1088
>gi|167855642|ref|ZP_02478400.1| calcium binding domain protein [Haemophilus parasuis 29755]
gi|167853214|gb|EDS24470.1| calcium binding domain protein [Haemophilus parasuis 29755]
Length = 909
Score = 150 bits (378), Expect = 9e-34, Method: Composition-based stats.
Identities = 81/420 (19%), Positives = 135/420 (32%), Gaps = 97/420 (23%)
Query: 52 QEVARWALGEWSKVVDLTFEE-----TSIHSD--IKFISSNNGYVCTPRYDSRYFMEINF 104
+E+ R ++S +++ F E + I F NG
Sbjct: 528 KEIFREVYDQYSSYLNVEFVESKVVPVTDRQSLVINFGKMTNGSAAVA-MSGGNITWNAA 586
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
+ W + ALHEIGH LG+ H S Y + DS SVMS
Sbjct: 587 NDYKSWGED-----YSYYTALHEIGHTLGMPHTDSTTEFGKDYLI-----EDSSEFSVMS 636
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI-EVQQKDSPFIQTI 222
Y ++ + + + + D+ +Q +G K G+++Y + S + I
Sbjct: 637 YNRYVNNSL---YQKLHSLRMYDLAYLQNRFGVNAKSRAGDDVYTFADFNTYASDGGRYI 693
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESW-------------------------------- 250
+D G D D + Y++LN SW
Sbjct: 694 WDGAGIDTFDASKE-QAGVYVNLNPGSWIYVGETKEKNFLIKSVHSSKQDVKIYFGLPDK 752
Query: 251 ---------------SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
S + + I Q T IE+++GS+ +D +IGN+A+N + +G+
Sbjct: 753 ATVDSNGAVNAPLDISDVEYTKGQAYIGQGTQIENLLGSAHSDTLIGNAADNNIYGGAGD 812
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G G DTF + A D +
Sbjct: 813 DTLIGGEGEDTFVFNASLNGKAD--------------------------VITDFSAEDKI 846
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
++I S + +I+ I D + G +G I F + + NVF
Sbjct: 847 ELSKTIFSSLTSADKVIEHIQYDSSTGKLSYDSDGSGKGNAIHFATLSTSSLFTVESNVF 906
>gi|238623370|emb|CAS06679.1| alkaline metalloprotease [Pseudomonas sp. W15a]
Length = 263
Score = 149 bits (375), Expect = 2e-33, Method: Composition-based stats.
Identities = 59/245 (24%), Positives = 90/245 (36%), Gaps = 33/245 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ ADHLLR+ + F+ ++ N
Sbjct: 13 NGKPSFSVDQAADHLLRENAAYRDLDGNGKIDLTYTFLTSASSATMNKHGITGFSQFNTQ 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYD-----SR 97
+ A A+ W+ V ++TF E + D N + P + S
Sbjct: 73 QKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNDKYHQSG 132
Query: 98 YFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYE 154
+ + + HEIGH LGL HPG YN G D DY
Sbjct: 133 LDGTSWYLTNSSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDADYG 192
Query: 155 NDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 193 QDTRGYSVMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGF 252
Query: 210 EVQQK 214
Sbjct: 253 NSNTG 257
>gi|238623346|emb|CAS06667.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 240
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 92/232 (39%), Gaps = 28/232 (12%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP TT++ AD L R W + F+ P T L ++ +
Sbjct: 10 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPAGYATRGLG-TFSQFSAL 68
Query: 51 AQEVARWALGEWSKVVDLTFEE--TSIHSDIKFISSN-------NGYVCTPRYDSRYFME 101
+E A+ +L W+ V +TF E + D +N + P +
Sbjct: 69 QKEQAKLSLESWADVAKVTFTEGPAARGGDGHMTFANFSASNGGAAFAYLPSSARKGESW 128
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 129 YLINKDYAVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRAY 188
Query: 161 SVMSYFMPQDSM----MDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIY 207
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 189 SVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVY 240
>gi|238623348|emb|CAS06668.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 251
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 63/237 (26%), Positives = 91/237 (38%), Gaps = 28/237 (11%)
Query: 3 NIKPVYTTERIADHLLR-DQYW-----------SNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP TT++ AD L R W + F+ P T L ++ +
Sbjct: 10 NGKPSLTTDQAADQLTRSGASWHDLNGDGVINLTYTFLTAPPVGYATRGLG-TFSQFSSL 68
Query: 51 AQEVARWALGEWSKVVDLTFEETSI--HSDIKFISSN-------NGYVCTPRYDSRYFME 101
+E A +L W+ V +TF E + D +N + P +
Sbjct: 69 QKEQAMLSLESWADVAKVTFTEGAAVRGGDGHMTFANFSASNGGAAFAYLPSSSRKGESW 128
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLT 160
+K G+G HEIGH LGL HPG YN G D Y D+
Sbjct: 129 YLINKDYEVNKSPGEGNYGRQTLTHEIGHTLGLSHPGDYNAGNGNPTYRDAVYGEDTRAY 188
Query: 161 SVMSYFMPQDSM----MDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
SVMSY+ ++ Y + P++ DI AVQK+YGA + G+ +Y
Sbjct: 189 SVMSYWSESNTGQHFTNSGEGAYASAPLLDDIAAVQKLYGANLETRAGDTVYGFNST 245
>gi|77404637|ref|YP_345211.1| hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
gi|77390287|gb|ABA81470.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
Length = 1112
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 104/518 (20%), Positives = 166/518 (32%), Gaps = 49/518 (9%)
Query: 29 RYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFIS--- 83
R + L ++T LN P+ + A AL W+ V L FE +
Sbjct: 40 RSLTPAIAAEPLRINVTGLNDHPDYKAAAIGALQTWATVTPLQFEIVDDAPFDRATDWME 99
Query: 84 ----SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
+ S ++ I D G + + +HE GH GL HPG
Sbjct: 100 VVSPEIGEPSDGSAFSSNRYVSIGQRFHDTEPDKTALGGYVFDSFVHEFGHEFGLNHPGL 159
Query: 140 YNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK- 193
YN P Y + + D SVMSYF D + S TP+++DI AV +
Sbjct: 160 YNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVG-ETSRWSATTPLMADIEAVIRR 218
Query: 194 -----------IYGAPKGSLGNNIYKIEVQQKDS---------PFIQTIYDSGGDDLLDL 233
Y + G++IY I+D+GG D +D
Sbjct: 219 FFSTVDEDGVRTYQTIDLNTGDDIYGFNSSVFGYELMSEGLQHDIGFVIHDTGGMDTIDF 278
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTI-------AQHTVIESVVGSSGNDVVIGNSAN 286
+ +DL +SS+ G+ N++I A IE+ +GS D +IGN +
Sbjct: 279 SG-STAGTILDLRAGRFSSVNGHSNNVSIFAGHNEDASDYYIEAGIGSRFADTLIGNDGD 337
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-KQDFLSDVERLR 345
NV G D G G DT+F + + + + + E +++VE +
Sbjct: 338 NVLDGRGGGDRMAGFGGDDTYFVDSADDIVREFADGGNDTIIVLTEGLDLGEVANVETII 397
Query: 346 FADQCIDSVNVKQRSILEYTAS--YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+A + + + + L+ G D G D+
Sbjct: 398 YAGGSAPAPDEGTPAPVAGAGGTLGSILMGTEGTDTLNGGAGGNTIFGLAGDDLLIGGRD 457
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
L S D + +D G + A + L +
Sbjct: 458 SLASRDINNTIAIADLEDQTES--DDGNDALYGGAGNDTIMGGAGDDTLDGGAGNDLLRG 515
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
Q G D F + +S L + G
Sbjct: 516 QDGVDVFRGGAGIDTVDYGMESPFQLLVNLETNVASGG 553
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/639 (11%), Positives = 141/639 (22%), Gaps = 74/639 (11%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
+ E+ + D T + D+ R G
Sbjct: 468 IAIADLEDQTESDDGNDALYGGAGNDTIMGGAGDDTLDGGAGNDLLRGQDGVDVFRGGAG 527
Query: 125 LHEIGHALGLMHPG-------------SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+ + + G+ P G Y ++N +D + +
Sbjct: 528 IDTVDY--GMESPFQLLVNLETNVASGGTASGDTFYSIENLIGSDDRIDRFIGTSDANHF 585
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDD 229
Y DI+ G+ G+ +Y + G D
Sbjct: 586 WGRGGGDYFNGRGGDDIL--------DGGADGDILYGEGGNDTIIGGAGQDYMNGGAGID 637
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI--------ESVVGSSGNDVVI 281
+ +DL+ + + + +VI E+VVGS +D +I
Sbjct: 638 TVVYAGSSAAV-TVDLSQGTARGGDADGPVQIVGRGSVIRHDILAGFENVVGSFHDDRLI 696
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-LYKIYRFENAIIVYDANEHKQDFLSD 340
G+ +NV G+D+ G G D A + D
Sbjct: 697 GDGKSNVLSGGRGDDILTGGGGADRLNGGAGRDTADYSTAARGVALSLTLGSSDGDSYRS 756
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--------------MKHF 386
+E L + + ++L + L G DV +
Sbjct: 757 IENLAGSGHADVMIGDTAANVLTGQGGNDTLFGRGGDDVLLGDFAPEGTPVPRPGLGTGY 816
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G + ++ ++ + D + +T +
Sbjct: 817 ATLGPEAANNSIETAFDLSENFSLTEDPDIFDSTSVLHTTVTATGNGQGGYYSLDLAAGT 876
Query: 447 ASHEDLINAFADA------------PDLVQVGKDHFSNFGCEEGRFVTF------DSYLY 488
D+ +V D + G R + Y
Sbjct: 877 VVTVDIDGIADPNVHDSWVRVLDSEGRIVAENDDGGGDPGSTSSRDSSTVFTVEETGTYY 936
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
+ + G A + + A + L+
Sbjct: 937 IVEGSWSEDAPGDGWSDAVPEGSDYKLNVSVEFPPEPVRPGEAGRDRLVGGAGGDLLDGG 996
Query: 549 AGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
D G S F+ L D F G
Sbjct: 997 LAAD--VLLGGAGEDSFRFSTALG-AGNVDRILDFEVGEDLILLDRAIFAEAGGAGTL-- 1051
Query: 609 GMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
F + + A + +D L D G G
Sbjct: 1052 --SFGAFHRSPSGAAQDASDRILYDTDSGFLSYDADGSG 1088
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 59/457 (12%), Positives = 117/457 (25%), Gaps = 16/457 (3%)
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
+V ++ + + + + D G G TI
Sbjct: 389 EVANVE-TIIYAGGSAPAPDEGTPAPVAGAGGTLGSILMGTEGTDTLNGGAGGNTIFGLA 447
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
+ G S + + D + + +S + Y + + G
Sbjct: 448 GDDLLIG--GRDSLASRDINNTIAIADLEDQTESDDGNDALYGGAGNDTIMGGAGDDTLD 505
Query: 184 MVSDIVAVQKIYGAPKGSLGNNI----YKIEVQQKDSPFIQTIYDSGGD---DLLD-LTL 235
+ ++ G G I Y +E + ++T SGG D +
Sbjct: 506 GGAGNDLLRGQDGVDVFRGGAGIDTVDYGMESPFQLLVNLETNVASGGTASGDTFYSIEN 565
Query: 236 IGGVKNYID--LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+ G + ID + T + G + + G + D++ G N+ +
Sbjct: 566 LIGSDDRIDRFIGTSDANHFWGRGGGDYFNGRGGDDILDGGADGDILYGEGGNDTIIGGA 625
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-VERLRFADQCID 352
G D +G +G+DT Y S + + DA+ Q V R +
Sbjct: 626 GQDYMNGGAGIDTVVYAGSSAAVTVDLSQGTARGGDADGPVQIVGRGSVIRHDILAGFEN 685
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSYDDL 411
V L L G D+ GRD + + +
Sbjct: 686 VVGSFHDDRLIGDGKSNVLSGGRGDDILTGGGGADRLNGGAGRDTADYSTAARGVALSLT 745
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
D + + G + D + D + L+
Sbjct: 746 LGSSDGDSYRSIENLAGSGHADVMIGDTAANVLTGQGGNDTLFGRGGDDVLLGDFAPE-G 804
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
G + + + + + F +
Sbjct: 805 TPVPRPGLGTGYATLGPEAANNSIETAFDLSENFSLT 841
>gi|332561596|ref|ZP_08415909.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
WS8N]
gi|332274098|gb|EGJ19416.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
WS8N]
Length = 1100
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 104/518 (20%), Positives = 166/518 (32%), Gaps = 49/518 (9%)
Query: 29 RYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFIS--- 83
R + L ++T LN P+ + A AL W+ V L FE +
Sbjct: 28 RSLTPAIAAEPLRINVTGLNDHPDYKAAAIGALQTWATVTPLQFEIVDDAPFDRATDWMQ 87
Query: 84 ----SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
+ S ++ I D G + + +HE GH GL HPG
Sbjct: 88 VVSPEIGEPSDGSAFSSNRYVSIGQRFHDTEPDKTALGGYVFDSFVHEFGHEFGLNHPGL 147
Query: 140 YNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK- 193
YN P Y + + D SVMSYF D + S TP+++DI AV +
Sbjct: 148 YNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVG-ETSRWSATTPLMADIEAVIRR 206
Query: 194 -----------IYGAPKGSLGNNIYKIEVQQKDS---------PFIQTIYDSGGDDLLDL 233
Y + G++IY I+D+GG D +D
Sbjct: 207 FFSTVDEDGVRTYQPIDLNTGDDIYGFNSTVFGYELMSEGLQHDIGFVIHDTGGMDTIDF 266
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTI-------AQHTVIESVVGSSGNDVVIGNSAN 286
+ +DL +SS+ G+ N++I A IE+ +GS D +IGN +
Sbjct: 267 SG-STAGTILDLRAGRFSSVNGHSNNVSIFAGHNEDASDYYIEAGIGSRFADTIIGNDGD 325
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-KQDFLSDVERLR 345
NV G D G G DT+F + + + + + E +++VE +
Sbjct: 326 NVLDGRGGGDRMAGFGGDDTYFVDSADDIVREFADGGNDTIIVLTEGLDLGEVANVETII 385
Query: 346 FADQCIDSVNVKQRSILEYTAS--YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+A + + + + L+ G D G D+
Sbjct: 386 YAGGSAPAPDEGTPAPVAGAGGTLGSILMGTEGTDTLNGGAGGNTIFGLAGDDLLIGGRD 445
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
L S D + +D G + A + L +
Sbjct: 446 SLASRDINNTIAIADLEDQTES--DDGNDALYGGAGNDTIMGGAGDDTLDGGAGNDLLRG 503
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
Q G D F + +S L + G
Sbjct: 504 QDGVDVFRGGAGIDTVDYGMESPFQLLVNLETNVASGG 541
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 71/641 (11%), Positives = 139/641 (21%), Gaps = 78/641 (12%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
+ E+ + D T + D+ R G
Sbjct: 456 IAIADLEDQTESDDGNDALYGGAGNDTIMGGAGDDTLDGGAGNDLLRGQDGVDVFRGGAG 515
Query: 125 LHEIGHALGLMHPG-------------SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+ + + G+ P G Y ++N +D + +
Sbjct: 516 IDTVDY--GMESPFQLLVNLETNVASGGTASGDTFYSIENLIGSDDRIDRFIGTSDANHF 573
Query: 172 MMDASFGYCATPMVSDIVA------VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY-- 223
Y DI+ + G +G + I T+
Sbjct: 574 WGRGGGDYFNGRGGDDILDGGADGDILYGEGGNDTIIGG---AGQDYMNGGAGIDTVVYA 630
Query: 224 DSGGDDLLDLTLIGGVKNYID-----LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
S +DL+ D + S + + ++G ++
Sbjct: 631 GSSAGVTVDLSQGTARGGDADGPVQIVGRGSVIRHDILAGFENVVGSFHDDRLIGDGKSN 690
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V+ G +++ G D +G +G DT Y + + + D
Sbjct: 691 VLSGGRGDDILTGGGGADRLNGGAGRDTADYSTAARGVALSLTLGS--------SDGDSY 742
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--------------MK 384
+E L + + ++L + L G DV
Sbjct: 743 RSIENLAGSGHADVMIGDTAANVLTGQGGNDTLFGRGGDDVLLGDFAPEGTPVPRPGLGT 802
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ G G + ++ ++ + D + +T +
Sbjct: 803 GYATLGPEAGNNSIETAFDLSENFSLTEDPDIFDSTSVLHTTVTATGNGQGGYYSLDLAA 862
Query: 445 YIASHEDLINAFADA------------PDLVQVGKDHFSNFGCEEGRFVTF------DSY 486
D+ +V D + G R +
Sbjct: 863 GTVVTVDIDGIADPNVHDSWVRVLDSEGRIVAENDDGGGDPGSTSSRDSSTVFTVEETGT 922
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
Y+ + G A + + A + L+
Sbjct: 923 YYIVEGSWSEDAPGDGWSDAVPEGSDYKLNVSVEFPPEPVRPGEAGRDRLVGGAGGDLLD 982
Query: 547 VQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
D G S F+ L D F G
Sbjct: 983 GGLAAD--VLLGGAGEDSFRFSTALG-AGNVDRILDFEVGEDLILLDRAIFAEAGGAGTL 1039
Query: 607 ISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
F + + A + +D L D G G
Sbjct: 1040 ----SFGAFHRSPSGAAQDASDRILYDTDSGFLSYDADGSG 1076
>gi|238623378|emb|CAS06683.1| alkaline metalloprotease [Pseudomonas sp. W31b]
Length = 278
Score = 148 bits (374), Expect = 3e-33, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 99/268 (36%), Gaps = 42/268 (15%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP +T ++ ADHLLR+ + F+ + ++ N
Sbjct: 11 NGKPSFTVDQAADHLLRENAAYRDVDGNGKIDLTYTFLTSASNATMNKHGITGFSQFNTQ 70
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYD-----SR 97
+ A A+ W+ V ++TF E + D N + P + S
Sbjct: 71 QKAQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSGGQDGAAAFAYLPGTNAKYNESG 130
Query: 98 YFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYE 154
+ + + HEIGH LGL HPG YN G D DY
Sbjct: 131 LDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDADYG 190
Query: 155 NDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
D+ SVMSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 191 QDTRGYSVMSYWSESNTNQNFSKGGVEAYSSGPLIDDIAAIQKLYGANYNTRAGDTTYGF 250
Query: 210 EVQQ---------KDSPFIQTIYDSGGD 228
+ +++D GG+
Sbjct: 251 NSNTGRDFLSATSSADKLVFSVWDGGGN 278
>gi|221218286|ref|YP_002524313.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
KD131]
gi|221163313|gb|ACM04279.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
KD131]
Length = 1100
Score = 148 bits (373), Expect = 3e-33, Method: Composition-based stats.
Identities = 104/518 (20%), Positives = 166/518 (32%), Gaps = 49/518 (9%)
Query: 29 RYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFIS--- 83
R + L ++T LN P+ + A AL W+ V L FE +
Sbjct: 28 RSLTPAIAAEPLRINVTGLNDHPDYKAAAIGALQTWATVTPLQFEIVDDAPFDRATDWME 87
Query: 84 ----SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
+ S ++ I D G + + +HE GH GL HPG
Sbjct: 88 VVSPEIGEPSDGSAFSSNRYVSIGQRFHDTEPDKTALGGYVFDSFVHEFGHEFGLNHPGL 147
Query: 140 YNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK- 193
YN P Y + + D SVMSYF D + S TP+++DI AV +
Sbjct: 148 YNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVG-ETSRWSATTPLMADIEAVIRR 206
Query: 194 -----------IYGAPKGSLGNNIYKIEVQQKDS---------PFIQTIYDSGGDDLLDL 233
Y + G++IY I+D+GG D +D
Sbjct: 207 FFSTVDEDGVRTYQPIDLNTGDDIYGFNSSVFGYELMSEGLQHDIGFVIHDTGGMDTIDF 266
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTI-------AQHTVIESVVGSSGNDVVIGNSAN 286
+ +DL +SS+ G+ N++I A IE+ +GS D +IGN +
Sbjct: 267 SG-STAGTILDLRAGRFSSVNGHSNNVSIFAGHNEDASDYYIEAGIGSRFADTLIGNDGD 325
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-KQDFLSDVERLR 345
NV G D G G DT+F + + + + + E +++VE +
Sbjct: 326 NVLDGRGGGDRMAGFGGDDTYFVDSADDIVREFADGGNDTIIVLTEGLDLGEVANVETII 385
Query: 346 FADQCIDSVNVKQRSILEYTAS--YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+A + + + + L+ G D G D+
Sbjct: 386 YAGGSAPAPDEGTTAPVAGAGGTLGSILMGTEGTDTLNGGAGGNTIFGLAGDDLLIGGRD 445
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
L S D + +D G + A + L +
Sbjct: 446 SLASRDINNTIAIADLEDQTES--DDGNDALYGGAGNDTIMGGAGDDTLDGGAGNDLLRG 503
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
Q G D F + +S L + G
Sbjct: 504 QDGVDVFRGGAGIDTVDYGMESPFQLLVNLETNVASGG 541
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 71/641 (11%), Positives = 139/641 (21%), Gaps = 78/641 (12%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
+ E+ + D T + D+ R G
Sbjct: 456 IAIADLEDQTESDDGNDALYGGAGNDTIMGGAGDDTLDGGAGNDLLRGQDGVDVFRGGAG 515
Query: 125 LHEIGHALGLMHPG-------------SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+ + + G+ P G Y ++N +D + +
Sbjct: 516 IDTVDY--GMESPFQLLVNLETNVASGGTASGDTFYSIENLIGSDDRIDRFIGTSDANHF 573
Query: 172 MMDASFGYCATPMVSDIVA------VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY-- 223
Y DI+ + G +G + I T+
Sbjct: 574 WGRGGGDYFNGRGGDDILDGGADGDILYGEGGNDTIIGG---AGQDYMNGGAGIDTVVYA 630
Query: 224 DSGGDDLLDLTLIGGVKNYID-----LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
S +DL+ D + S + + ++G ++
Sbjct: 631 GSSAGVTVDLSQGTARGGDADGPVQIVGRGSVIRHDILAGFENVVGSFHDDRLIGDGKSN 690
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V+ G +++ G D +G +G DT Y + + + D
Sbjct: 691 VLSGGRGDDILTGGGGADRLNGGAGRDTADYSTAARGVALSLTLGS--------SDGDSY 742
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--------------MK 384
+E L + + ++L + L G DV
Sbjct: 743 RSIENLAGSGHADVMIGDTAANVLTGQGGNDTLFGRGGDDVLLGDFAPEGTPVPRPGLGT 802
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ G G + ++ ++ + D + +T +
Sbjct: 803 GYATLGPEAGNNSIETAFDLSENFSLTEDPDIFDSTSVLHTTVTATGNGQGGYYSLDLAA 862
Query: 445 YIASHEDLINAFADA------------PDLVQVGKDHFSNFGCEEGRFVTF------DSY 486
D+ +V D + G R +
Sbjct: 863 GTVVTVDIDGIADPNVHDSWVRVLDSEGRIVAENDDGGGDPGSTSSRDSSTVFTVEETGT 922
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
Y+ + G A + + A + L+
Sbjct: 923 YYIVEGSWSEDAPGDGWSDAVPEGSDYKLNVSVEFPPEPVRPGEAGRDRLVGGAGGDLLD 982
Query: 547 VQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
D G S F+ L D F G
Sbjct: 983 GGLAAD--VLLGGAGEDSFRFSTALG-AGNVDRILDFEVGEDLILLDRAIFAEAGGAGTL 1039
Query: 607 ISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
F + + A + +D L D G G
Sbjct: 1040 ----SFGAFHRSPSGAAQDASDRILYDTDSGFLSYDADGSG 1076
>gi|307318732|ref|ZP_07598165.1| Peptidase M10 serralysin [Sinorhizobium meliloti AK83]
gi|306895759|gb|EFN26512.1| Peptidase M10 serralysin [Sinorhizobium meliloti AK83]
Length = 1112
Score = 148 bits (372), Expect = 4e-33, Method: Composition-based stats.
Identities = 120/620 (19%), Positives = 189/620 (30%), Gaps = 82/620 (13%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIH------ 76
R + L ++ ELN P + A AL W+ V L FE
Sbjct: 36 GALPRSLTPEMAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVDDTPFDSTT 95
Query: 77 -SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
Y S ++ I D G + + +HE GH GL
Sbjct: 96 DWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLN 155
Query: 136 HPGSYNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
HPG YN P Y + + D SVMSYF D + S +TP+++DI A
Sbjct: 156 HPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVG-ETSRWSASTPLMADIEA 214
Query: 191 VQK------------IYGAPKGSLGNNIYKIEVQQKDS---------PFIQTIYDSGGDD 229
V + Y + G+N+Y Q I+D+GG D
Sbjct: 215 VIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGAD 274
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-------AQHTVIESVVGSSGNDVVIG 282
+D + +DL +SS+ G+ N++I A IE+ +GS +D++IG
Sbjct: 275 TIDFSG-STAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDILIG 333
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-KQDFLSDV 341
N N SG D G+ G DT+F + + + V + + K +++V
Sbjct: 334 NDGANTLDGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANV 393
Query: 342 ERLRFADQCIDSVNVKQRSILEYTAS--YEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
E + +AD+ S + + G D + G D+
Sbjct: 394 ENIIYADESTTQPGGGGASPPSAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGRGGDDLII 453
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
L S D + D G + ++ L D
Sbjct: 454 GGRDSLASRDINNTIDVEDLEDQTES--DDGNDTLYGGGGNDTILGGQGNDILDGGAGDD 511
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR---------------- 503
Q G D F + + +S L G
Sbjct: 512 MLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFYSIENLIGSDD 571
Query: 504 -------GAAARHY----------ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
+AA H+ G + L A ++ +I
Sbjct: 572 RIDRFVGTSAANHFWGQGGGDYFNGGDGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLD 631
Query: 547 VQAGKDHFSNFGYEEGRSIT 566
+G D G +G +I
Sbjct: 632 GGSGLDTVVYAGSPDGVTID 651
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 79/631 (12%), Positives = 145/631 (22%), Gaps = 76/631 (12%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH------E 127
+ D G T + D+ G + E
Sbjct: 477 TESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDMLSGQDGVDIFRGGAGVDTVDFSKE 536
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
L + + G G + + S + +G +
Sbjct: 537 SPFQLLVNLATNVASGGTASGDTFYSIENLIGSDDRIDRFVGTSAANHFWGQGGGDYFNG 596
Query: 188 IVAVQKIYGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ G G+ +Y + G D + IDL
Sbjct: 597 GDGNDILDGGND---GDILYGEAGNDTVIGGAGQDYLDGGSGLDTVVYAG-SPDGVTIDL 652
Query: 246 NTESWSSIGGYEKNMTIAQHTVI--------ESVVGSSGNDVVIGNSANNVFFESSGN-- 295
+ S G + + VI E+ GSS +D +IGN+ N +G+
Sbjct: 653 ANGTASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDT 712
Query: 296 -------DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
D +G +G DT Y + D +E L +
Sbjct: 713 LTGGGGADRLNGGAGSDTADYADA--------TSGVRLGLAGGRSGGDTYVSIENLAGSG 764
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--------------MKHFYEFG---- 390
++L + + G D + G
Sbjct: 765 FGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAPPRPGMGSGYATLGPDAA 824
Query: 391 -------LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ + S + + + + G Y + G
Sbjct: 825 NNSIAAAFDISNNFSLTSDPDIFDSTTILHTTVNATGNGQGGYYKIDLAAGTVITIDIDG 884
Query: 444 EYIASHEDL-INAFADAPDLVQVGKDHFSNFGCEEGRFVTF------DSYLYLGSYDDLR 496
+ D + A ++V D + G R + Y+
Sbjct: 885 IADPNVHDSWVRLLDSAGNIVAQNDDGGGDPGSTSNRDSSLVFVAQETGTYYILEGSWSP 944
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
G A T+ + A +A + LI D +
Sbjct: 945 TAPGDGWAEAVPAGSTYELNVSVEFPPLPAQPGVAGSDTLIGGGGSDLLDGGLAAD--TL 1002
Query: 557 FGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM 616
G + F+ L + D + + D + + I G + +
Sbjct: 1003 TGGAGEDTFRFSTALGNGNVDWIKDFNVIDDTILLDNLIFES-----VGGEGALALGAFY 1057
Query: 617 NLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
+ AD + +D L D G G
Sbjct: 1058 GSAGGVAHDADDRIIYDADSGVLSYDADGAG 1088
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 59/444 (13%), Positives = 111/444 (25%), Gaps = 13/444 (2%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEI--NFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+D G P I + D G G TI I
Sbjct: 399 ADESTTQPGGGGASPPSAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGRGGDDLIIGGRDS 458
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ N V +++ E+D ++ + D+++ Q
Sbjct: 459 LASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDMLSGQDG 518
Query: 195 YGAPKGSLGNNIYKIEVQQ------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYID--LN 246
+G G + + + + + + GD + + G + ID +
Sbjct: 519 VDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFYSIENLIGSDDRIDRFVG 578
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T + + G + + G + D++ G + N+ +G D DG SGLDT
Sbjct: 579 TSAANHFWGQGGGDYFNGGDGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGLDT 638
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-VERLRFADQCIDSVNVKQRSILEYT 365
Y I D + Q V R ++ L
Sbjct: 639 VVYAGSPDGVTIDLANGTASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGN 698
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSYDDLRNVFGSDRGAAAR 424
A +L G D G D + G D +
Sbjct: 699 ALANELSGGAGDDTLTGGGGADRLNGGAGSDTADYADATSGVRLGLAGGRSGGDTYVSIE 758
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ G + + + D I+ L+ G +
Sbjct: 759 NLAGSGFGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAP-PRPGMGSGYA 817
Query: 485 SYLYLGSYDDLRNVFGSDRGAAAR 508
+ + + + F +
Sbjct: 818 TLGPDAANNSIAAAFDISNNFSLT 841
>gi|150377392|ref|YP_001313987.1| peptidase domain-containing protein [Sinorhizobium medicae WSM419]
gi|150031939|gb|ABR64054.1| peptidase domain protein [Sinorhizobium medicae WSM419]
Length = 1112
Score = 147 bits (370), Expect = 7e-33, Method: Composition-based stats.
Identities = 102/499 (20%), Positives = 163/499 (32%), Gaps = 49/499 (9%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSIH------ 76
R + L ++ ELN P + A AL W+ V L FE
Sbjct: 36 GALPRSLTPEMAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEVVDDTPFDSST 95
Query: 77 -SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
Y S ++ I D G + + +HE GH GL
Sbjct: 96 DWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLN 155
Query: 136 HPGSYNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
HPG YN P Y + + D SVMSYF D + S +TP+++DI A
Sbjct: 156 HPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVG-ETSRWSASTPLMADIEA 214
Query: 191 VQK------------IYGAPKGSLGNNIYKIEVQQKDS---------PFIQTIYDSGGDD 229
V + Y + + G+N+Y Q I+D+GG D
Sbjct: 215 VIRRFFSTVDENGVRTYQHIELNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGAD 274
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-------TVIESVVGSSGNDVVIG 282
+D + +DL +SS+ G+ N++I I++ +GS +D++IG
Sbjct: 275 TIDFSG-STAGTILDLRAGQFSSVNGHSNNVSIFAGHNADETDYYIDNGIGSRFDDILIG 333
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-KQDFLSDV 341
N N G D G+ G DT+F + + + V + H K +++V
Sbjct: 334 NDGANTLDGRGGGDRMAGNGGDDTYFVDSIDDIVREEANGGNDTVILLSRHLKIRKIANV 393
Query: 342 ERLRFADQCIDSVNVKQRSILEYTAS--YEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
E + +AD+ + + + G D+ + G D+
Sbjct: 394 ENIIYADETTTQPGGGAETPPSAGDNTMTSIIFGGSGNDILDGGAGDDTIFGQGGDDLII 453
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
L S D + D G + ++ L D
Sbjct: 454 GGRDSLASRDINNTIDVEDLEDQTES--DDGNDTLYGGGGNDTILGGQGNDILDGGAGDD 511
Query: 460 PDLVQVGKDHFSNFGCEEG 478
Q G D F +
Sbjct: 512 TLSGQDGIDIFRGGEGTDT 530
Score = 97.9 bits (242), Expect = 5e-18, Method: Composition-based stats.
Identities = 81/623 (13%), Positives = 145/623 (23%), Gaps = 60/623 (9%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH------E 127
+ D G T + D G E
Sbjct: 477 TESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDTLSGQDGIDIFRGGEGTDTVDFSKE 536
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
L + + G G + + S + +G +
Sbjct: 537 SPFQLLVNLATNVASGGTASGDTFYSIENLIGSDDRIDRFIGTSAANHFWGQGGGDYFNG 596
Query: 188 IVAVQKIYGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ G G+ +Y + G D + IDL
Sbjct: 597 GGGNDTLDGGND---GDILYGEAGNDTIIGGAGQDYLDGGSGVDTVVYAG-SPDGVTIDL 652
Query: 246 NTESWSSIGGYEKNMTIAQHTVI--------ESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ G + + VI E+ VGSS +D +IGN+ N +G+D
Sbjct: 653 AEGTACGGDGDGPVQIVGRGAVIRHDILAGFENAVGSSFDDHLIGNALANELSGGAGDDR 712
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-HKQDFLSDVERLRFADQCIDSVNV 356
G G D A S + + + A D +E L +
Sbjct: 713 LTGGGGADRLNGGAGSDTADYADATSGVRLSLAGRKSGGDTYVSIENLAGSGFNDRLTGD 772
Query: 357 KQRSILEYTASYEDLIQVIGQDVFES--------------MKHFYEFG-----------L 391
++L + + G D + G
Sbjct: 773 GAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAPPRPGMGTGYATLGPDATNNSIAAAF 832
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHE 450
+ + S + + + G Y + G + H+
Sbjct: 833 DISDNFSLTSDPDIFDSTTTLHTTVNATGNGQGGYYKIDLAAGTVITIDIDGIADPDVHD 892
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF------DSYLYLGSYDDLRNVFGSDRG 504
+ A ++V D + G R + Y+ G
Sbjct: 893 SWVRLLDSAGNIVAQNDDGGGDPGSTSNRDSSLVFVAQETGTYYILEGSWSPTAPGDGWA 952
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
A T+ + A ++ + LI G D + G +
Sbjct: 953 EAVPAGSTYELNVSVEFPPAPAQPGVSGSDTLIGGRGSDLLDGGLGAD--TLIGGAGEDT 1010
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
F+ L + D + D + + I G + F + +
Sbjct: 1011 FRFSTALGNGNVDGIREFDVIDDTILLDNLIFES-----VGGDGALAFGAFFGSAGGLAH 1065
Query: 625 KADLSLSFDHKKVDLYTDYFGDG 647
AD + +D L D G G
Sbjct: 1066 DADDRIIYDTDSGVLSYDADGAG 1088
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 61/444 (13%), Positives = 113/444 (25%), Gaps = 13/444 (2%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEI--NFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+D G P I D+ G G TI I
Sbjct: 399 ADETTTQPGGGAETPPSAGDNTMTSIIFGGSGNDILDGGAGDDTIFGQGGDDLIIGGRDS 458
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ N V +++ E+D ++ + D ++ Q
Sbjct: 459 LASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDTLSGQDG 518
Query: 195 YGAPKGSLGNNIYKIEVQQ------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYID--LN 246
+G G + + + + + + GD + + G + ID +
Sbjct: 519 IDIFRGGEGTDTVDFSKESPFQLLVNLATNVASGGTASGDTFYSIENLIGSDDRIDRFIG 578
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T + + G +++ G + D++ G + N+ +G D DG SG+DT
Sbjct: 579 TSAANHFWGQGGGDYFNGGGGNDTLDGGNDGDILYGEAGNDTIIGGAGQDYLDGGSGVDT 638
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-VERLRFADQCIDSVNVKQRSILEYT 365
Y I E D + Q V R ++V L
Sbjct: 639 VVYAGSPDGVTIDLAEGTACGGDGDGPVQIVGRGAVIRHDILAGFENAVGSSFDDHLIGN 698
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSYDDLRNVFGSDRGAAAR 424
A +L G D G D + G D +
Sbjct: 699 ALANELSGGAGDDRLTGGGGADRLNGGAGSDTADYADATSGVRLSLAGRKSGGDTYVSIE 758
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ G + D + D I+ L+ G +
Sbjct: 759 NLAGSGFNDRLTGDGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAP-PRPGMGTGYA 817
Query: 485 SYLYLGSYDDLRNVFGSDRGAAAR 508
+ + + + F +
Sbjct: 818 TLGPDATNNSIAAAFDISDNFSLT 841
>gi|238623392|emb|CAS06690.1| alkaline metalloprotease [Pseudomonas fluorescens bv. A]
Length = 267
Score = 146 bits (369), Expect = 1e-32, Method: Composition-based stats.
Identities = 58/247 (23%), Positives = 87/247 (35%), Gaps = 28/247 (11%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 8 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSATQSTMNKHGISGFSQFNTQ 67
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 68 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 127
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 128 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRG 187
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK 214
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA + Y
Sbjct: 188 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANFNTRATDTTYGFNSNTG 247
Query: 215 DSPFIQT 221
T
Sbjct: 248 RDFLSAT 254
>gi|332970464|gb|EGK09455.1| hypothetical protein HMPREF0476_0906 [Kingella kingae ATCC 23330]
Length = 773
Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats.
Identities = 84/366 (22%), Positives = 122/366 (33%), Gaps = 43/366 (11%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADV-----WRYGIGKGTILSHNALHEI 128
S + +S GY + DKA YG G +HEI
Sbjct: 301 SEEAQNAGVSMTAGYAYYGGDVHINSLLYAGDKALSKGTLKVPYGNGWFDGGYGTLVHEI 360
Query: 129 GHALGLMHPGSYN-GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LG H G+YN G ++ SVMSY +DS + + D
Sbjct: 361 GHSLGFKHTGNYNGQNGKAEGPYLPDGEENSGHSVMSYKDLRDSNQN-VIQTGQGLQIFD 419
Query: 188 IVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLTLIGGVKNYIDL 245
+ A+ YG K + GNN Y+ + KD I+D G D D + K +DL
Sbjct: 420 LAALHYRYGVNKAENSGNNTYRFKAYNKDKVGNDIYIWDGSGIDTFDAS-DAKDKVTVDL 478
Query: 246 NTESWSSIGGYE-------------KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
SW+ IG I T IE+++GS+ ND + GN A+N+
Sbjct: 479 TPGSWNYIGSKTSHLITDTLGHKVTGQSFIGYGTQIENLIGSAFNDTLRGNDADNIITGG 538
Query: 293 SGNDVFDGSSGLDTF----------------FYYAPSYLYKIYRFENAIIVYDANEHKQD 336
GND G G DT Y + + N +
Sbjct: 539 KGNDTIFGDLGNDTLDGGEGVDQLSGGRGDDIYIVDNTSDTVTEAANEGKDTVISSVNYT 598
Query: 337 FLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDV---FESMKHFYEFGLS 392
++VE L + S +++ LI G D ++ H
Sbjct: 599 LSANVENLTLVGKANLSGTGNDLDNVITGNRGNNTLIGGKGNDTYVFSKAGGHDTIITRG 658
Query: 393 EGRDIT 398
G D
Sbjct: 659 GGNDTL 664
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 66/465 (14%), Positives = 137/465 (29%), Gaps = 28/465 (6%)
Query: 28 IRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------SIHSDI 79
+RY + + + + E + ++ R AL E++K ++TFEE ++D
Sbjct: 187 VRYSFALRNYNGET-NFKEFSVTQKQAVRDALAEYAKYANITFEEVLDSGDQLDKGNADF 245
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH-NALHEIGHALGLMHPG 138
+F + P ++ + + H A H A+G
Sbjct: 246 RFYFDDLRNHNEPGTVVYNSVKSSQPNLMPTTQNMCLCCGGFHRTARHNKTTAIG--SEE 303
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+ N G + Y D + S++ S Y + G
Sbjct: 304 AQNAGVSMTAGYAYYGGDVHINSLLYAGDKALSKGTLKVPYGNGWFDGGYGTLVHEIGHS 363
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-TLIGGVKNYIDLNTESWSSIGG-- 255
G Y + + + P++ ++ G ++ L +N I
Sbjct: 364 LGFKHTGNYNGQNGKAEGPYLPDGEENSGHSVMSYKDLRDSNQNVIQTGQGLQIFDLAAL 423
Query: 256 -YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
Y + A+++ + + N +GN ++ SG D FD S D
Sbjct: 424 HYRYGVNKAENSGNNTYRFKAYNKDKVGNDI--YIWDGSGIDTFDASDAKDKVTVDLTPG 481
Query: 315 LYKIYRFENAIIVYDANEHKQD------FLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + ++ D HK + + +E L + +I+
Sbjct: 482 SWNYIGSKTSHLITDTLGHKVTGQSFIGYGTQIENLIGSAFNDTLRGNDADNIITGGKGN 541
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ + +G D + + + G DI G D ++ +Y
Sbjct: 542 DTIFGDLGNDTLDGGEGVDQLSGGRGDDIYIVDN--TSDTVTEAANEGKDTVISSVNYTL 599
Query: 429 HGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFS 471
E L + D + + + G D +
Sbjct: 600 SANVENLTLVGKANLSGTGNDLDNVITGNRGNNTLIGGKGNDTYV 644
>gi|238623404|emb|CAS06696.1| alkaline metalloprotease [Pseudomonas fluorescens bv. C]
Length = 280
Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 99/268 (36%), Gaps = 42/268 (15%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ ADHLLR+ + F+ ++ +
Sbjct: 13 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGISGFSQFSNL 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYD-----SR 97
+ A A+ W+ V ++TF E + D N + P + S
Sbjct: 73 QKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHTSG 132
Query: 98 YFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYE 154
+ + + G HEIGH LGL HPG YN G D DY
Sbjct: 133 TDGTSWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDADYG 192
Query: 155 NDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
D+ SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 193 QDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGF 252
Query: 210 EVQQ---------KDSPFIQTIYDSGGD 228
+ +++D GG+
Sbjct: 253 NSNTGRDHLSATSNADKLVFSVWDGGGN 280
>gi|238623402|emb|CAS06695.1| alkaline metalloprotease [Pseudomonas fluorescens bv. C]
Length = 274
Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats.
Identities = 61/274 (22%), Positives = 100/274 (36%), Gaps = 42/274 (15%)
Query: 7 VYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEV 54
++ ++ ADHLLR+ + F+ ++ + +
Sbjct: 1 SFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGISGFSQFSNLQKGQ 60
Query: 55 ARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYD-----SRYFME 101
A A+ W+ V ++TF E + D N + P + S
Sbjct: 61 AVLAMQSWADVANVTFTERASGGDFHMTFGNYSSGQDGAAAFAYLPGTNEKYHTSGTDGT 120
Query: 102 INF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSF 158
+ + + G HEIGH LGL HPG YN G D DY D+
Sbjct: 121 SWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYRDADYGQDTR 180
Query: 159 LTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ 213
SVMSY+ ++ + + G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 181 GYSVMSYWGENNTNQNFTKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNT 240
Query: 214 ---------KDSPFIQTIYDSGGDDLLDLTLIGG 238
+ +++D GG+D LD +
Sbjct: 241 GRDHLSATSNADKLVFSVWDGGGNDTLDFSGFTQ 274
>gi|254413957|ref|ZP_05027725.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196179093|gb|EDX74089.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 665
Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats.
Identities = 108/512 (21%), Positives = 174/512 (33%), Gaps = 73/512 (14%)
Query: 54 VARWALGEWSKVVDLTFEETSIHSDIKFISSNN-GYVCTPRYDSRYFMEINFDKADVWRY 112
+ R A+ +W V ++ F +++F + G + + +Y+ +++ ++ +
Sbjct: 1 MVREAINQWKYVANIDFHRVDKGGNLRFSGESGKGGLASYKYNRKWWNPFSWGSDKLNHV 60
Query: 113 GI--------GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
I G G A+HEIGHALGL HPG+YNG Y D+ +VMS
Sbjct: 61 NIKLGKQSENGIGARFLDVAIHEIGHALGLKHPGNYNGDKKGKSPFLSYSQDNNTNTVMS 120
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK---------- 214
Y Y ATPM DI AVQ +YGA + GN YK
Sbjct: 121 YNDV--------GSYAATPMPYDIRAVQYLYGARSFNSGNTTYKFSSVNSYWDGSRHRGR 172
Query: 215 -DSPFIQTIYDSGGDDLLDLT--LIGGVKNYIDLNTES---------------------- 249
+ P ++DS G D +L+ +ID+N
Sbjct: 173 SNKPMKLAVWDSAGVDTFNLSKLGYSRNGYHIDINQGGIITYQDEYNQRTYKAQDNSKDR 232
Query: 250 --WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
W + + TIA IE+VVGSS +D +IGNS+ NV G+D G+S DT
Sbjct: 233 KDWETHKTSPRGTTIAYGARIENVVGSSSDDKIIGNSSANVLRGGRGDDDIKGNSNNDTL 292
Query: 308 F----------------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+ S ++Y + + + + + + R F
Sbjct: 293 YGDAGNDRLYGGSGSDRLDGGSGNDRLYGGSGSDRLDGGSGNDRLYGDSSSRFSFFSGSD 352
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
L + L+ G D G D +G
Sbjct: 353 YLHGGLGNDSLYGGRYNDTLVGSYGNDYLHGGTGSDSMSGGSGNDRY--VVDNVGDRIVE 410
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY-IASHEDLINAFADAPDLVQVGKDHF 470
+ G+D+ +++ +Y E + + Y A + + G D
Sbjct: 411 YSNRGTDQVSSSINYTLGDHLENLSLTGKASRGYGNALNNRIRGNNLANYIRGSAGDDRL 470
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+G + D+ G R GS
Sbjct: 471 YGYGGNDTLKGDGDNDYLNGGTGSDRMYGGSG 502
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 52/189 (27%), Gaps = 20/189 (10%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G + L+ + G + + GY N T+ + + G +G+D + G S
Sbjct: 443 GYGNALNNRIRGNNLANYIRGSAGDDRLYGYGGNDTLKGDGDNDYLNGGTGSDRMYGGSG 502
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N+ +G+D G SG D + + +I + N ++ +E L
Sbjct: 503 NDYLNGGTGSDRMSGGSGNDRYVVD--NVGDRIVEYSNHGTDQVSSSINYTLGDHLENLS 560
Query: 346 FADQCIDSVNVK------------------QRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ L + + L D
Sbjct: 561 LTGKASRGYGNALNNSIRGNNLANYIRGSAGDDYLYGYSGNDTLTGDGDNDYLNGGTGSD 620
Query: 388 EFGLSEGRD 396
G D
Sbjct: 621 SMYGGSGND 629
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/375 (11%), Positives = 85/375 (22%), Gaps = 50/375 (13%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
I + +D L G N + G N + + + + G
Sbjct: 276 GGRGDDDIKGNSNNDTL----YGDAGNDRLYGGSGSDRLDGGSGNDRLYGGSGSDRLDGG 331
Query: 275 SGNDVVIGNSAN--------NVFFESSGNDVFDGSSGLDTFF------------------ 308
SGND + G+S++ + GND G DT
Sbjct: 332 SGNDRLYGDSSSRFSFFSGSDYLHGGLGNDSLYGGRYNDTLVGSYGNDYLHGGTGSDSMS 391
Query: 309 -------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
Y + +I + N ++ +E L + +
Sbjct: 392 GGSGNDRYVVDNVGDRIVEYSNRGTDQVSSSINYTLGDHLENLSLTGKASRGYGNALNNR 451
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + G D D Y G+
Sbjct: 452 IRGNNLANYIRGSAGDDRLYGYGGNDTLKGDGDNDYLNGGTGSDRMY----------GGS 501
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ + + + + + D I +++ +++ E +
Sbjct: 502 GNDYLNGGTGSDRMSGGSGNDRYVVDNVGDRIVEYSNHGTDQVSSSINYTLGDHLENLSL 561
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
T + Y + N A + G L ++ L
Sbjct: 562 TGKASR---GYGNALNNSIRGNNLANYIRGSAGDDYLYGYSGNDTLTGDGDNDYLNGGTG 618
Query: 542 DAPDLVQAGKDHFSN 556
+G D +
Sbjct: 619 SDSMYGGSGNDRYIA 633
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 12/137 (8%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN----- 246
++YG N + S + + D+ GD +++ + G + +N
Sbjct: 495 DRMYGGSGNDYLNGGTGSDRMSGGSGNDRYVVDNVGDRIVEYSNHGTDQVSSSINYTLGD 554
Query: 247 -------TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
T S G N +I + + + GS+G+D + G S N+ ND +
Sbjct: 555 HLENLSLTGKASRGYGNALNNSIRGNNLANYIRGSAGDDYLYGYSGNDTLTGDGDNDYLN 614
Query: 300 GSSGLDTFFYYAPSYLY 316
G +G D+ + + + Y
Sbjct: 615 GGTGSDSMYGGSGNDRY 631
>gi|197105378|ref|YP_002130755.1| hemolysin-type calcium-binding region protein [Phenylobacterium
zucineum HLK1]
gi|196478798|gb|ACG78326.1| hemolysin-type calcium-binding region protein [Phenylobacterium
zucineum HLK1]
Length = 662
Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats.
Identities = 81/391 (20%), Positives = 125/391 (31%), Gaps = 43/391 (10%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFD-------ITELNPNAQEVARWALGE 61
+ + I D LL WS + + + L Q R AL
Sbjct: 10 SGDPIVDGLLFGSKWSGTSLTFSFPASVADLADYATPLDPTYFGVLEAAGQTAVRAALAR 69
Query: 62 WSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKAD------VWRYGIG 115
W+ V +TF E + + + F + + D
Sbjct: 70 WAAVAAVTFTEVAPSAAADLRIYHYDDGTLFTARVVAFPDATPEAGDLQFGSMFVGPDWS 129
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
G +HEIGHALGL HP G+P D ++ ++ P
Sbjct: 130 PGNYHYFTVVHEIGHALGLKHPHDTPNGFPAADSAVDAVAETIMSYRSYVGGPMGGYSLQ 189
Query: 176 SFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ Y PM SDI A+Q +YG + G+ Y + S Q ++D GG D +
Sbjct: 190 AGSYPVGPMPSDIAAIQHLYGPNWATNAGDTTYTFDP--SASVIFQAVWDGGGTDTYNFA 247
Query: 235 LIGGVKNYIDLNTESWSSIGG-----YEKNMTIAQ--------------HTVIESVVGSS 275
+IDL WS +GG + +I ++IE+ VG S
Sbjct: 248 SYAADL-HIDLRAGEWSDLGGQYAVLDTGDASIRPSGNVANPHLYQGDLRSLIENAVGGS 306
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D + GN A N +G+D G G DT S + +
Sbjct: 307 GDDTLTGNQAANTLTGGAGDDSLVGGDGADTLV--GGSGNDTLSGGAGSDRFTLGGGGDV 364
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ D+ + V + T
Sbjct: 365 -----IADFLAGDRIVAQGAVAGDLTFDLTG 390
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 41/140 (29%), Gaps = 14/140 (10%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y ++ GDD + + + G + +
Sbjct: 495 YGAADTVYGGQGDDRVFGDEGDDAIYGDMGSDRLD----GGTGDDVAHGGPGDDVVEGGQ 550
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G D V G + ++ + G+D G +G D F + + + +
Sbjct: 551 GADLLYGGKDADTVSGGAGDDWIWGDLGDDRLSGGAGADRFAF--------VAGYAGNDV 602
Query: 327 VYDANEHKQDF--LSDVERL 344
+ D + D L VE
Sbjct: 603 IADFSAADGDRIELRGVEDF 622
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/326 (12%), Positives = 71/326 (21%), Gaps = 46/326 (14%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E ++ + N T + + D AD G G T+
Sbjct: 300 ENAVGGSGDDTLTGNQAANTLTGGAGDDSLVGGDGADTLVGGSGNDTLSGGAGSDRFTLG 359
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCATPMVSDIVA 190
G + G + + +F + P + ASF T +
Sbjct: 360 GGGDVIADFLAGDRIVAQGAVAGDLTFDLTGEILTIDPDGAGAAASFTVTVTGGLL---- 415
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ Y++ + + + T
Sbjct: 416 --------------SGYELVAEADGGLVWKALPPPPEPPPPGPTHTDQ--------PGEG 453
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + T + V+GS D V GN ++ D G G D F
Sbjct: 454 SDFVVLSQEGTTFAGAGADWVLGSIEGDWVHGNQGDDYLHGYGAADTVYGGQGDDRVF-- 511
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
IY + RL + ++E +
Sbjct: 512 GDEGDDAIYGDMGSD-----------------RLDGGTGDDVAHGGPGDDVVEGGQGADL 554
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRD 396
L D G D
Sbjct: 555 LYGGKDADTVSGGAGDDWIWGDLGDD 580
>gi|296532986|ref|ZP_06895639.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296266686|gb|EFH12658.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 921
Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats.
Identities = 74/307 (24%), Positives = 116/307 (37%), Gaps = 47/307 (15%)
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV-KQRSILEYTASYEDLIQVIGQD 378
+++ ++ RL FAD + + + Y A+Y D+ G D
Sbjct: 642 DSRGSLVTLRGPGFEEVVSGARLRLVFADGVLRDQDGDALMDGIHYAATYRDIYAA-GVD 700
Query: 379 VFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
H+ FG EG+D F + Y + D+R H+ +G EGR+
Sbjct: 701 P---AAHYRSFGWQEGKDPSAYFSTLGYRSANADVRQA----GVNPLEHFRQNGSAEGRD 753
Query: 437 PD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV----------TFDS 485
P F Y + D+ A + H+ FG EGR + D
Sbjct: 754 PSAEFDLRMYKVYNPDVAAAGLEP-------LTHYLAFGAAEGRRIHAAVGDDIRGGLDL 806
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAP 544
YL S D+ G A H+ G +EGR+P+A F Y+A++ D+ A P
Sbjct: 807 QYYLLSQPDV----GFAGVDPAAHFRASGWREGRDPNAYFDTAGYLATYADVRAA-GVDP 861
Query: 545 DLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
H+ G+ EGR + F+ YL + D+ QH++T G+ EG
Sbjct: 862 L------AHYMASGWREGRDPSTRFDTTAYLAANPDVAAA----GVNPLQHFLTAGLFEG 911
Query: 603 RALGISG 609
R+ G
Sbjct: 912 RSAQADG 918
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/196 (23%), Positives = 74/196 (37%), Gaps = 24/196 (12%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E R + + Y D+ E + H+ FG +EGR I
Sbjct: 741 EHFRQNGSAEGRDPSAEFDLRMYKVYNPDVAAA----GLEPLTHYLAFGAAEGRRIHAAV 796
Query: 402 YLYLGSYDDLR------NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
+ DL+ G A H+ G +EGR+P+A F Y+A++ D+
Sbjct: 797 GDDIRGGLDLQYYLLSQPDVGFAGVDPAAHFRASGWREGRDPNAYFDTAGYLATYADVRA 856
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
A D H+ G EGR + FD+ YL + D+ + +H++T
Sbjct: 857 AGVDP-------LAHYMASGWREGRDPSTRFDTTAYLAANPDVAAAGVN----PLQHFLT 905
Query: 513 HGVKEGRNPDAFKALE 528
G+ EGR+ A A
Sbjct: 906 AGLFEGRSAQADGAWG 921
>gi|186684725|ref|YP_001867921.1| hemolysin-type calcium-binding region [Nostoc punctiforme PCC
73102]
gi|186467177|gb|ACC82978.1| Hemolysin-type calcium-binding region [Nostoc punctiforme PCC
73102]
Length = 522
Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats.
Identities = 91/439 (20%), Positives = 144/439 (32%), Gaps = 53/439 (12%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
R Y D ++ + + + P ++ AL W+ V ++ F + +
Sbjct: 38 TRIDYSFWNSTAASFDDPYKNKAT-NPNDWFPEGKDSLIKALDAWAAVANIQFVDAGDNK 96
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDK---------ADVWRYGIGKGTILSHNALHE 127
N Y F + A GT+ +HE
Sbjct: 97 ESATLGFYNLNNADLGDYLFGEFSPPGENGQGIGYFNREALGGNVAGAPGTLNFAVLIHE 156
Query: 128 IGHALGLMHPGSYNGGYPVYG-------VDNDYENDSFLTSVMSYFMPQDSMMDA----S 176
+GH LGL HP GG P+Y + + + + MSY S
Sbjct: 157 LGHGLGLAHPHDNGGGSPIYPGVTSPFRSLGNLGLNQGIYTTMSYNSGFYSQNGNQEKLG 216
Query: 177 FGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL 235
+G +TPM DI A+Q +YG GN+ Y + + I+D+GG D ++ +
Sbjct: 217 YGLESTPMAFDIAAIQYLYGPNNSYKTGNDTYYLPSVNQSGTSYSCIWDAGGVDTING-I 275
Query: 236 IGGVKNYIDLN-------------TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
IDLN SS G TIA VIE+ GS+ ND +IG
Sbjct: 276 SAQSDVTIDLNDASLNTAQDGAGAGGYVSSAKGIFGGFTIANSVVIENATGSNFNDQIIG 335
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N +N + GND DG +G DT + ++ + + + +
Sbjct: 336 NEFSNSLVGNDGNDTIDGGAGSDTI--NGGNGNDRLIGRAGSDRLTGG--------TGND 385
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
L + Y +GQD +F S+G I D
Sbjct: 386 VLIGGAGNDVLLGGTGADRFLYDTEGAFARADVGQDTIS------DFNRSQGDKIVLDRT 439
Query: 403 LYLGSYDDLRNVFGSDRGA 421
+ N ++ A
Sbjct: 440 TFTVLSSTSGNSLAANDFA 458
>gi|254470859|ref|ZP_05084262.1| hypothetical protein PJE062_2767 [Pseudovibrio sp. JE062]
gi|211960001|gb|EEA95198.1| hypothetical protein PJE062_2767 [Pseudovibrio sp. JE062]
Length = 1398
Score = 146 bits (367), Expect = 2e-32, Method: Composition-based stats.
Identities = 101/472 (21%), Positives = 161/472 (34%), Gaps = 69/472 (14%)
Query: 9 TTERIADHLLRDQYWSNYF--------IRYKPDVLTTHRLSFDITELNPNAQEVARWALG 60
T + ++D L F + D ++ ++ A
Sbjct: 6 TLDELSDFLTTSYSHGAAFNLGDTGPYAKSGKLTYNVTGNIHDADGISGRVTKLIEDAFE 65
Query: 61 EWSKVVDLTFEETSI-HSDIKFISSNNGYVCTPRYDSRYFME---------INFDKADVW 110
V + F +T+ +D F ++ G ++ + IN +
Sbjct: 66 YIESVTGIEFVQTTDESADFNFTNNVAGRAFAGHHNYARMADGKQTYESARINLSETGSH 125
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQ- 169
+ + LHEIGHALGL H G YN G + + + NDS+ S+MSYF
Sbjct: 126 GSIWDENKYFAQTVLHEIGHALGLGHQGHYN-GSANFYKNATFLNDSWQNSIMSYFDQNQ 184
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAPKG----------SLGNNIYKIEVQQKDSPFI 219
+ D S+ + +D++A+ K+YG LG+ +Y
Sbjct: 185 NPTDDGSYAVPQSFKAADLLALDKLYGDQSYDGKTFGTKNAFLGDTVYGWNTNLSGHDNT 244
Query: 220 -------------QTIYDSGGDDLLDLTLIGGVKNYIDLN-------TESWSSIGGYEKN 259
+ D GG+D LD++ N IDL SSIG KN
Sbjct: 245 RMVNLARYSDQNSYALVDGGGNDTLDMSG-SRYNNRIDLRVTQADATEAYTSSIGPKHKN 303
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ IA TVIE+ VG GND + GN A+N GND G G D F+ A +
Sbjct: 304 IAIAVGTVIENAVGGRGNDHITGNYADNHLLGGVGNDKMFGLEGDDHFYLEAGNDTMDGG 363
Query: 320 RFENAIIVYDA-------------NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + + QD L +E + + + LE
Sbjct: 364 EGSDWLHIDSGADMDIDLNRESLSSSFGQDRLISIENIDSGSGNDRIIGNDAANTLEGND 423
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ L G D+ + + G D YL + DD+ +
Sbjct: 424 GDDTLYGNGGNDILKGGNGNDKLYGGAG-----DDRFYLDAGDDVIQGGDGN 470
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 52/312 (16%), Positives = 89/312 (28%), Gaps = 9/312 (2%)
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
I D R G G TI E+ G + +G +
Sbjct: 656 IDGRGGDDTLIGDGGNDKLRGGAGNDTIHGGAGNDELSDGDGDDLLYAGDGDDILIMGKG 715
Query: 152 DYENDSFL-TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
D ++ + +D S T + + + G +++
Sbjct: 716 RDLLDGGEGFDLVRATEEEALTVDLSTSRLETSYGVKYLRNIEGFEGNVGDDQLTGSELD 775
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ T+ G D LD L GG+ N I L ++ G + T+
Sbjct: 776 NTLIGNGGNDTLIGLEGHDRLDGGAGVDMLDGGIGNDILLGGAGSDTLMGGAGDDTLDGG 835
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G SG+D++ + SGND DG + D S ++ + A
Sbjct: 836 ADNDMLEGGSGDDILRAGHGADTLKGGSGNDTLDGGADND--VLQGGSGNDVLHGGDGAD 893
Query: 326 IVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ A + D + + L + LE + L G D
Sbjct: 894 TLKGEAGNDELDGGAGNDILIDLEGQNILRGGDGDDYLEAGSGNSKLYGGEGDDTLVLSG 953
Query: 385 HFYEFGLSEGRD 396
EG D
Sbjct: 954 GNETIHGGEGID 965
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/310 (14%), Positives = 87/310 (28%), Gaps = 19/310 (6%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E N + + + D+ + G G +I +
Sbjct: 997 VENITSGASNDSLRGNDADNILISGAGHDWLYGREGNDILKAGEGNDSIDGGAGNDLLDG 1056
Query: 131 ALGLM--HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
+G + G + + D + +D S G ++
Sbjct: 1057 NVGNDRLNGGDGDDVVDAGAGRDVITLDEGNDIIRGGEGKDSLKVDGSKGAHIDLSKTE- 1115
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
A + + G + + + + L G N +
Sbjct: 1116 --------AQETNYGLDTITGIEDLAGGAGDDHLSGNEQTNYLI----GNDGNDVLSGAG 1163
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G N T+ +++ G +GNDV+ G++ ++ SG DV DG G DT
Sbjct: 1164 GNDTLRGDAGNDTLHGGDGNDNLTGGAGNDVINGDAGDDYIILGSGYDVIDGGDGRDTVT 1223
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
Y + ++ + SDVE + + + + L
Sbjct: 1224 YSGSENIKVDLSRTGTQDIWI----GRAKFSDVENVSGGSGNDVLIGNEGENTLTGGKGA 1279
Query: 369 EDLIQVIGQD 378
+ L G D
Sbjct: 1280 DTLQGGGGSD 1289
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 62/387 (16%), Positives = 109/387 (28%), Gaps = 22/387 (5%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
T + + DV G G T+ E+ G G
Sbjct: 861 GGSGNDTLDGGADNDVLQGGSGNDVLHGGDGADTLKGEAGNDELDGGAGNDILIDLEGQN 920
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ G D D ++ + Y D + S G I + + +
Sbjct: 921 ILRGGDGDDYLEAGSGNSKLYGGEGDDTLVLSGGNETIHGGEGIDHLIVK--DDRRINVD 978
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ ++ + +L G + I ++ + G E N +
Sbjct: 979 LAKTWRQGTTIGTLEVSGVENITSGASNDSLRGNDADNILISGAGHDWLYGREGNDILKA 1038
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+S+ G +GND++ GN N+ G+DV D +G D I E
Sbjct: 1039 GEGNDSIDGGAGNDLLDGNVGNDRLNGGDGDDVVDAGAGRD--VITLDEGNDIIRGGEGK 1096
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + N +I EDL G D +
Sbjct: 1097 DSLKVDGSKGA-------HIDLSKTEAQETNYGLDTIT----GIEDLAGGAGDDHLSGNE 1145
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGVKEGRNPDAFK 441
++G D+ + G D LR G+D G + + N DA
Sbjct: 1146 QTNYLIGNDGNDVLSGA----GGNDTLRGDAGNDTLHGGDGNDNLTGGAGNDVINGDAGD 1201
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKD 468
+ S D+I+ + G +
Sbjct: 1202 DYIILGSGYDVIDGGDGRDTVTYSGSE 1228
>gi|329848975|ref|ZP_08264003.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844038|gb|EGF93607.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 827
Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats.
Identities = 99/632 (15%), Positives = 166/632 (26%), Gaps = 105/632 (16%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDV--------LTTHRLSFDITELNPNAQEVARWAL 59
++ + D +L W+ + + N Q AR+AL
Sbjct: 66 FSGVQDIDAVLIGSKWTVTNLTFSFPTSGAVYQTPYYDSGYLASHVAFNGAQQAGARYAL 125
Query: 60 GEWSKVVDLTFEETSIHSD--IKFISSNNGYVCTPR------YDSRYFMEIN-FDKADVW 110
G LTF E + +D S G + +I + +
Sbjct: 126 GLVDGYTLLTFSEIAETADTHANIRLSQTGDASLVTADGNFPGSDSWDGDIWLTTSSQPF 185
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGS-------------YNGGYPVYGVDNDYENDS 157
G LHEIGH+LGL H G ++DS
Sbjct: 186 YTTPQAGNWGMAVLLHEIGHSLGLKHGHEDYTTVDLTAGGYVDGPGPRYGTRALATQHDS 245
Query: 158 FLTSVMSYFMPQDSMMDA-------SFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKI 209
+ SVM+ ++ F T M +DI A+Q +YGA GN IY
Sbjct: 246 WAYSVMTARSDPNNNAGENPSFQGDGFNQPQTYMQNDIAALQYLYGADFTTQAGNTIYSF 305
Query: 210 EV-----------------QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ +TI+D G D D + + I+L+ +WS+
Sbjct: 306 DAATGQMFINGAAQAVPTQNGGVGKIFRTIWDGNGIDTYDFSNFSNNQ-TINLDPGAWST 364
Query: 253 IGG----------------YEKNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFF 290
+ N+ A ++IE+ G +G D + GN N
Sbjct: 365 MNAVQLAELRPLDAEVTVNAPGNIANALLYNNDTRSLIENANGGAGQDTISGNDGGNQLH 424
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ GND G D + + + A + D
Sbjct: 425 GNDGNDRLYAYKGDD--LLSGDAGNDYLDGWSGADTLVGG-----------------DGT 465
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
L + + G D G D + + +
Sbjct: 466 DTLWGYSGNDFLSGGNDNDTINGEAGNDYLHGGAGADSMVGGSGNDTYVLDDVGDITVEV 525
Query: 411 LRNVFGSDRGAAARHYITHGVKE------GRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
L A + + G + G + + D N
Sbjct: 526 LWTGGNDWIYAPFSYTLADGYENLTLVGSGNLSGTGNSDYNVIRGTDGNNWLDGGGGGDT 585
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA- 523
+ ++ + + D + G + + S G A I G + R
Sbjct: 586 LTGGLGNDTYIIDSEWARVDELHFQGDDTVISSASYSLFGRAVETLILTGTENLRATGNS 645
Query: 524 -FKALEYIASHEDLINAFADAPDLVQAGKDHF 554
L + L + G D +
Sbjct: 646 LNNVLNGNFGNNRLDGGAGGDRMVGGLGNDTY 677
>gi|171057323|ref|YP_001789672.1| Na-Ca exchanger/integrin-beta4 [Leptothrix cholodnii SP-6]
gi|170774768|gb|ACB32907.1| Na-Ca exchanger/integrin-beta4 [Leptothrix cholodnii SP-6]
Length = 1415
Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats.
Identities = 100/650 (15%), Positives = 176/650 (27%), Gaps = 60/650 (9%)
Query: 34 VLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPR 93
++ Q ++L + V ++T ++ N
Sbjct: 767 DNAGDVITEGAGAGTDTVQASITYSLAGLANVENITLT-----GSAAINATGNALANRVI 821
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
++ + D G G T++ GL Y +
Sbjct: 822 GNAGANRLVGDAGNDTLGGGAGNDTMVG-----------GLGDDVYYVDAAGDVVTEVAG 870
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ + S +SY + + G + A A +L +
Sbjct: 871 QGTDTVYSNVSYTLSSEVESLVLTGSAGLSGTGNDSANLLAGNAGANNLTGGL--GNDTL 928
Query: 214 KDSPFIQTIYDSGGDDLL--------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
++ GDD G + + + + +N+T+
Sbjct: 929 NGGAGTDSLAGGQGDDTYVVDNAGDVITEGAGAGTDTVQASITYSLAGLANVENITLTGS 988
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKI 318
I + G++ + VIGN+ N +GND G +G DT YY + +
Sbjct: 989 AAI-NATGNALANRVIGNAGANRLVGDAGNDTLGGGAGNDTMVGGLGDDVYYVDAAGDVV 1047
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQ 377
+ S+VE L S ++L A +L +G
Sbjct: 1048 TEVAGQGTDTVYSNVSYTLSSEVESLVLTGSAGLSGTGNDSANLLAGNAGANNLTGGLGN 1107
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D +G D G G+D A+ Y G+ N
Sbjct: 1108 DTLNGGAGTDSLAGGQGDDTYVVDNA--GDVITEGAGAGTDTVQASITYSLAGLANVENI 1165
Query: 438 DAFKALEYIASHEDLIN-AFADAPDLVQVGKDHFSNFGCEEGRFVTF----DSYLYLGSY 492
+ A+ L N +A VG G G D Y+ +
Sbjct: 1166 TLTGSAAINATGNALANRVIGNAGANRLVGDAGNDTLGGGAGNDTMVGGLGDDVYYVDAA 1225
Query: 493 DDLRNVF---GSDRGAAARHYITHGVKE--------GRNPDAFKALEYIASH---EDLIN 538
D+ G+D + Y E G + + +A + +L
Sbjct: 1226 GDVVTEVAGQGTDTVYSNVSYTLSSEVESLVLTGSAGLSGTGNDSANLLAGNAGANNLTG 1285
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ AG D G FN L S D + F + A + I
Sbjct: 1286 GLGNDTLNGAAGND--VLNGGVGSDLFVFNGTLNAASNVDTISDFSAGDRIALDNDIFSA 1343
Query: 599 MKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
+ G A ++ F + E + + +D LY D G G+
Sbjct: 1344 L--GAAGTLNSSSFYAGAGFVESTSAAQAAGVYYDLNTGSLYYDADGFGS 1391
Score = 100 bits (248), Expect = 1e-18, Method: Composition-based stats.
Identities = 72/498 (14%), Positives = 137/498 (27%), Gaps = 39/498 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + G T + D G G T + + GL
Sbjct: 457 TGNTGNNTLNGAGGNDTIYGGAGNDSLTGGTGTDSLLGGAGDDTYTYDSGDVIVE---GL 513
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ LT + D + + G ++ V +
Sbjct: 514 NEGNDTILSAVSLTLAVANVEGITLTGADNVNATGDGLANTLTGNTGNNVMDGGVGADSL 573
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G G++ Y ++ ++ + T G D + ++ + ++ +
Sbjct: 574 AGGQ----GDDTYVVD----NAGDVITEGAGAGTDTVQASITYSLAGLANV----ENITL 621
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ + + V+G++G + ++G++ N+ +GND G G D YY +
Sbjct: 622 TGSAAINATGNALANRVIGNAGANRLVGDAGNDTLGGGAGNDTMVGGLGDD--VYYVDAA 679
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQ 373
+ + S+VE L S ++L A +L
Sbjct: 680 GDVVTEVAGQGTDTVYSNVSYTLSSEVESLVLTGSAGLSGTGNDSANLLAGNAGANNLTG 739
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+G D +G D G G+D A+ Y G+
Sbjct: 740 GLGNDTLNGGAGTDSLAGGQGDDTYVVDNA--GDVITEGAGAGTDTVQASITYSLAGLAN 797
Query: 434 GRNPDAFKALEYIASHEDLIN-AFADAPDLVQVGKDHFSNFGCEEGRFVTF----DSYLY 488
N + A+ L N +A VG G G D Y
Sbjct: 798 VENITLTGSAAINATGNALANRVIGNAGANRLVGDAGNDTLGGGAGNDTMVGGLGDDVYY 857
Query: 489 LGSYDDLRNVF---GSDRGAAARHYITHGVKE--------GRNPDAFKALEYIASH---E 534
+ + D+ G+D + Y E G + + +A +
Sbjct: 858 VDAAGDVVTEVAGQGTDTVYSNVSYTLSSEVESLVLTGSAGLSGTGNDSANLLAGNAGAN 917
Query: 535 DLINAFADAPDLVQAGKD 552
+L + AG D
Sbjct: 918 NLTGGLGNDTLNGGAGTD 935
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 76/553 (13%), Positives = 147/553 (26%), Gaps = 30/553 (5%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
D L + D T + LN + A+ V ++ E +
Sbjct: 481 DSLTGGTGTDSLLGGAGDDTYTYDSGDVIVEGLN-EGNDTILSAVSLTLAVANV--EGIT 537
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ ++ +G T ++ + AD G G T + NA I G
Sbjct: 538 LTGADNVNATGDGLANTLTGNTGNNVMDGGVGADSLAGGQGDDTYVVDNAGDVITEGAGA 597
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ + LT + +++ + G + +
Sbjct: 598 G-TDTVQASITYSLAGLANVENITLTGSAAINATGNALANRVIGNAGANRLVGDAGNDTL 656
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID----LNTESW 250
G + D+ GD + ++ G Y + L++E
Sbjct: 657 GGGA---------GNDTMVGGLGDDVYYVDAAGDVVTEVAGQGTDTVYSNVSYTLSSEVE 707
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + ++ + + G++G + + G N+ +G D G G DT+
Sbjct: 708 SLVLTGSAGLSGTGNDSANLLAGNAGANNLTGGLGNDTLNGGAGTDSLAGGQGDDTYVVD 767
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ V + + L++VE + I++ + + A
Sbjct: 768 NAGDVITEGAGAGTDTVQASITYSLAGLANVENITLTGSAAINATGNALANRVIGNAGAN 827
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L+ G D G D+ + G G+D + Y
Sbjct: 828 RLVGDAGNDTLGGGAGNDTMVGGLGDDVYYVDAA--GDVVTEVAGQGTDTVYSNVSYTLS 885
Query: 430 GVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
E L + L +G D + +
Sbjct: 886 SEVESLVLTGSAGLSGTGNDSANLLAGNAGANNLTGGLGNDTLNGGAGTDSLAGGQGDDT 945
Query: 488 YLGSY-DDLRNVF---GSDRGAAARHYITHGVK--EGRNPDAFKALE--YIASHEDLINA 539
Y+ D+ G+D A+ Y G+ E A+ A +I
Sbjct: 946 YVVDNAGDVITEGAGAGTDTVQASITYSLAGLANVENITLTGSAAINATGNALANRVIGN 1005
Query: 540 FADAPDLVQAGKD 552
+ AG D
Sbjct: 1006 AGANRLVGDAGND 1018
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/350 (12%), Positives = 83/350 (23%), Gaps = 35/350 (10%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--- 329
G+ ND + G + ++V + +D G +G DT+ +
Sbjct: 367 GTGYNDSLTGGAGDDVLDGRALDDTMKGGAGNDTYIAEESGGQITEEAASGNDTIISYLS 426
Query: 330 ----ANEHKQDFLSDVERLRFAD--QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
++ + L V + + + L + + G D
Sbjct: 427 NYTLSSTIENLVLGGVANISGTGSAEANTLTGNTGNNTLNGAGGNDTIYGGAGNDSLTGG 486
Query: 384 KHFYEFGLSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYITHGVKEGRN- 436
G D + D + + A IT + N
Sbjct: 487 TGTDSLLGGAGDDTYTYDSGDVIVEGLNEGNDTILSAVSLTLAVANVEGITLTGADNVNA 546
Query: 437 --PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS----NFGCEEGRFVTFDSYLYLG 490
L + + G D + EG D+
Sbjct: 547 TGDGLANTLTGNTGNNVMDGGVGADSLAGGQGDDTYVVDNAGDVITEGAGAGTDTVQASI 606
Query: 491 SYD-------------DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
+Y + + A R G L A ++ ++
Sbjct: 607 TYSLAGLANVENITLTGSAAINATGNALANRVIGNAGANRLVGDAGNDTLGGGAGNDTMV 666
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDR 587
D V A D + + ++ N L+S + + GS
Sbjct: 667 GGLGDDVYYVDAAGDVVTEVAGQGTDTVYSNVSYTLSSEVESLVLTGSAG 716
>gi|218531476|ref|YP_002422292.1| hypothetical protein Mchl_3544 [Methylobacterium chloromethanicum
CM4]
gi|218523779|gb|ACK84364.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 713
Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats.
Identities = 82/400 (20%), Positives = 127/400 (31%), Gaps = 57/400 (14%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVD 67
+ + + L+ W + Y + +++ + + + S +
Sbjct: 10 SDSSLVNALITRYKWGENTLNYGFKAQDIEKN--GVSDFDEGQWRSFYKSIFDNVSSFTN 67
Query: 68 LTFEETSIHSDI---KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH-- 122
L F ETS G P + + +
Sbjct: 68 LDFRETSFAESTLGQILEVGGGGQSSNPYPELPNGNTYTVVRFFGTVASASESIYRGQWS 127
Query: 123 -NALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND---SFLTSVMSYFM----------- 167
HEIGH+LGL HP G D D + S L +VMSY
Sbjct: 128 SVWYHEIGHSLGLAHPFEQPGVIAGVRSDADLGTNFINSSLYTVMSYSSFVWGEDNPWTR 187
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
QD+ + M DI A+Q +YGA + GN +Y + + TI+D+GG
Sbjct: 188 AQDAGRTFMNASAGSYMPIDIAALQHLYGAKAANTGNTVYTFGDDLRTNAGFNTIWDTGG 247
Query: 228 DDLLDLTLIGGVKNYIDLNT----------ESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+D + K IDL S+ IA IE+ +G S +
Sbjct: 248 NDTIRYAGSSRAK--IDLRAATLKDEIGGGGFVSTSDKLNGGFLIANGVAIETAIGGSKD 305
Query: 278 DVVIGNSANNVFFESSGNDV------------------FDGSSGLDTFFYYAPSYLYKI- 318
D++ G+ +N +GND DG G+D + S Y I
Sbjct: 306 DILHGHDGDNTLIGGAGNDTLFGYAGNDVLEGGTGSDRLDGGEGIDAARFAGQSRDYAIV 365
Query: 319 ---YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
A V D L+ +E L F D + S
Sbjct: 366 YDASTTAGAFAVKHIATGALDTLASIETLVFDDTALGSQG 405
>gi|240139968|ref|YP_002964445.1| hypothetical protein MexAM1_META1p3431 [Methylobacterium extorquens
AM1]
gi|240009942|gb|ACS41168.1| conserved hypothetical protein, putative protease-like protein
[Methylobacterium extorquens AM1]
Length = 713
Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats.
Identities = 81/400 (20%), Positives = 129/400 (32%), Gaps = 57/400 (14%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVD 67
+ + + ++ W + Y V + +++ + + + S +
Sbjct: 10 SDSSLVNAVITRYKWGENTLNYGFKVQDIDKN--GVSDFDEGQWRSFYKSIFDNVSSFTN 67
Query: 68 LTFEETSIHSDI---KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH-- 122
L F ETS G P + + +
Sbjct: 68 LDFRETSFEESTLGQILEVGGGGQSSNPYPELPNGNTYTVVRFFGSVASASESIYRGQWS 127
Query: 123 -NALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND---SFLTSVMSYFM----------- 167
HEIGH+LGL HP G D D + S L +VMSY
Sbjct: 128 SVWYHEIGHSLGLAHPFEQPGVIAGVRSDADLGTNFINSSLYTVMSYSSFVWGEDNPWTR 187
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
QD+ + M DI A+Q +YGA + G+ +Y + + TI+D+GG
Sbjct: 188 TQDAGRTFMNASAGSYMPIDIAALQHLYGARAANTGDTVYTFGDDLRTNAGFNTIWDTGG 247
Query: 228 DDLLDLTLIGGVKNYIDLNT----------ESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+D + K IDL S+ IA IE+ +G S +
Sbjct: 248 NDTIRYVGSSRAK--IDLRAATLKDEIGGGGFVSTSDKLNGGFLIANGVAIETAIGGSKD 305
Query: 278 DVVIGNSANNVFFESSGNDV------------------FDGSSGLDTFFYYAPSYLYKI- 318
D++ G+ +N +GND DG G+D + S Y I
Sbjct: 306 DILHGHDGDNTLIGGAGNDTLFGYAGNDVLEGGTGSDRLDGGEGIDAARFAGQSRDYAIV 365
Query: 319 ---YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
A V D L+ +E L F D ++S
Sbjct: 366 YDASTTAGAFAVKHIATGALDTLASIETLVFDDTALESQG 405
>gi|113474014|ref|YP_720075.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101]
gi|110165062|gb|ABG49602.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101]
Length = 928
Score = 144 bits (364), Expect = 4e-32, Method: Composition-based stats.
Identities = 74/373 (19%), Positives = 129/373 (34%), Gaps = 65/373 (17%)
Query: 26 YFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSD----IKF 81
+ + + ++ + + + + + + +D+ F+E +D I+
Sbjct: 320 TYSFFSEQAINSYYGRENPLPVTDPIKINVKDIFNLFEQYIDVRFQEVGDTADNYGQIRI 379
Query: 82 ISSNN-------GYVCTPRYDSRY--FMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ SN GY P S +I+ Y G+ HEIGHAL
Sbjct: 380 MLSNGPLQNESRGYAYQPPGTSENPADGDIHLSSVYQDEYEDVPGSYGYITIAHEIGHAL 439
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
GL HPG+Y+ G Y D+ ++M+Y + Y TPM DI ++Q
Sbjct: 440 GLKHPGNYSPGERAPF--LSYAQDNNTNTMMTY-----IGLGGLNQYSTTPMTYDIQSLQ 492
Query: 193 KIYGAPKG-SLGNNIYKIEVQ-----------QKDSPFIQTIYDSGGDDLLDLT------ 234
+YG + N Y + D+ T++D GG D +DL+
Sbjct: 493 YLYGRNNNFNAENTTYSFDRVYGFFDGNQYLGSSDTETKLTLWDGGGFDTIDLSKLPDLE 552
Query: 235 -LIGGVKNYIDLNTESWSSIGGYEKNM--------------------TIAQHTVIESVVG 273
IDL + IA V+E+++
Sbjct: 553 LADFTYDYRIDLREGGLITTTDAYNQHEYIAFQDTSGKKYKTSTSGTAIAYGAVMENLIN 612
Query: 274 SSGNDVVIGNSANNVFFE-----SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
S G+D++ N+A N F +GND ++ D S R + ++
Sbjct: 613 SRGDDLIYANNAANKFSGYTPGKYTGNDKIFRTNQKDVLDLSEYSSSQVKRRRKKKDLIL 672
Query: 329 D-ANEHKQDFLSD 340
D E+ +S+
Sbjct: 673 DLGEENGSITISN 685
>gi|163852635|ref|YP_001640678.1| hypothetical protein Mext_3220 [Methylobacterium extorquens PA1]
gi|163664240|gb|ABY31607.1| hypothetical protein Mext_3220 [Methylobacterium extorquens PA1]
Length = 713
Score = 144 bits (363), Expect = 5e-32, Method: Composition-based stats.
Identities = 81/400 (20%), Positives = 129/400 (32%), Gaps = 57/400 (14%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVD 67
+ + + ++ W + Y V + +++ + + + S +
Sbjct: 10 SDSSLVNAVITRYKWGENTLNYGFKVQDIDKN--GVSDFDEGQWRSFYKSIFDNVSSFTN 67
Query: 68 LTFEETSIHSDI---KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH-- 122
L F ETS G P + + +
Sbjct: 68 LDFRETSFEESTLGQILEVGGGGQSSNPYPELPNGNTYTVVRFFGSVASASESIYRGQWS 127
Query: 123 -NALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND---SFLTSVMSYFM----------- 167
HEIGH+LGL HP G D D + S L +VMSY
Sbjct: 128 SVWYHEIGHSLGLAHPFEQPGVIAGVRSDADLGTNFINSSLYTVMSYSSFVWGEDNPWTR 187
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
QD+ + M DI A+Q +YGA + G+ +Y + + TI+D+GG
Sbjct: 188 AQDAGRTFMNASAGSYMPIDIAALQHLYGARAANTGDTVYTFGDDLRTNAGFNTIWDTGG 247
Query: 228 DDLLDLTLIGGVKNYIDLNT----------ESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+D + K IDL S+ + IA IE+ +G S +
Sbjct: 248 NDTIRYVGSSRAK--IDLRAATLKDEIGGGGFVSTSDKLNGGLLIANGVAIETAIGGSKD 305
Query: 278 DVVIGNSANNVFFESSGNDV------------------FDGSSGLDTFFYYAPSYLYKI- 318
D++ G+ +N +GND DG G+D + S Y I
Sbjct: 306 DILHGHDGDNTLIGGAGNDTLFGYAGNDVLEGGTGSDRLDGGEGIDAARFAGQSRDYAIV 365
Query: 319 ---YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
A V D L+ +E L F D + S
Sbjct: 366 YDASTTAGAFAVKHIATGALDTLASIETLVFDDTALGSQG 405
>gi|254562393|ref|YP_003069488.1| hypothetical protein METDI4008 [Methylobacterium extorquens DM4]
gi|254269671|emb|CAX25643.1| conserved hypothetical protein, putative protease-like protein
[Methylobacterium extorquens DM4]
Length = 713
Score = 144 bits (362), Expect = 5e-32, Method: Composition-based stats.
Identities = 75/400 (18%), Positives = 125/400 (31%), Gaps = 57/400 (14%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVD 67
+ + + +L W + Y + + I + N + + S +
Sbjct: 10 SDSSLINAVLAPNKWDATTLNYGFQIQDIDQN--GIADFNEGQWRGFYKSNFDNISSFTN 67
Query: 68 LTFEETSIHSDI---KFISSNNGYVCTPRYD---SRYFMEINFDKADVWRYGIGKGTILS 121
LTF ETS G P + + S
Sbjct: 68 LTFRETSFEESTLGQILTVGGGGSSFDPHPGMPNGNTHTSVGIQGTVAEASDVVFRGQWS 127
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE---NDSFLTSVMSY-----------FM 167
HEIGH+LGL HP G + D +S L +VMSY
Sbjct: 128 EVWYHEIGHSLGLDHPFERPGAIAGVRSEADLGTNFLNSSLYTVMSYSPFAWGEDNPWTT 187
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
+D+ + M DI A+Q +YGA + G+ +Y + + TI+D+GG
Sbjct: 188 AKDAGKTFMNASVGSYMPIDIAALQHLYGARAANTGDTVYTFGDDLRTNAGFNTIWDTGG 247
Query: 228 DDLLDLTLIGGVKNYI--------DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+D + K + S+ IA IE+ +G S +D+
Sbjct: 248 NDTIRYVGSSRAKIDLRAATLKDEIGGGGFVSTSDKLNGGFLIANGVAIETAIGGSKDDI 307
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-------- 331
+ G+ +N +GND G +G D + ++ + A
Sbjct: 308 LHGHDGDNTLIGGAGNDTLFGYAGND--VLEGGTGSDRLDGGDGIDAARFAGQSRDYAIV 365
Query: 332 ----------------EHKQDFLSDVERLRFADQCIDSVN 355
D L+ +E L F D ++S
Sbjct: 366 YDASTTASAFAVKHIATGALDTLASIETLVFDDTALESQG 405
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 42/153 (27%), Gaps = 15/153 (9%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS--------YLYKIYRFENAIIVYDANE 332
+ + ++G + + G DT Y S K +
Sbjct: 225 TVYTFGDDLRTNAGFNTIWDTGGNDTIRYVGSSRAKIDLRAATLKDEIGGGGFVSTSDKL 284
Query: 333 HKQDFLSD---VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ +++ +E + + L A + L G DV E
Sbjct: 285 NGGFLIANGVAIETAIGGSKDDILHGHDGDNTLIGGAGNDTLFGYAGNDVLEGGTGSDRL 344
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+G D+ + G D V+ + A+
Sbjct: 345 DGGDG----IDAARFAGQSRDYAIVYDASTTAS 373
>gi|148553551|ref|YP_001261133.1| peptidase M10, serralysin-like protein [Sphingomonas wittichii RW1]
gi|148498741|gb|ABQ66995.1| Peptidase M10, serralysin-like protein [Sphingomonas wittichii RW1]
Length = 606
Score = 143 bits (361), Expect = 8e-32, Method: Composition-based stats.
Identities = 106/528 (20%), Positives = 167/528 (31%), Gaps = 55/528 (10%)
Query: 24 SNYFIRYKPDVLTTHRLSFDI-TELNPNAQEVARWALGEWSKVVDLTFEETSIH------ 76
+ F T +FDI + + Q A WS V D+TF + S
Sbjct: 47 TAKFGAGTAGTGATISYAFDIASNWSAVEQSAFASAAALWSAVADVTFVQASPGTAEVIL 106
Query: 77 ----------SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGI--GKGTILSHNA 124
F + G R G
Sbjct: 107 RRGSDGHASGGQNTFFPGSTGTTTIGRARDGAIEIDTSAAGFGPIGSTFSEYGGYPYTTL 166
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS-------- 176
+HE GH LGL H G+Y+ +G DS ++MSY P +
Sbjct: 167 VHEWGHVLGLGHGGAYDESLD-FGSPRYTSFDSRAWTLMSYNDPDSGFSWGTSRASDGLL 225
Query: 177 -FGYCATPMVSDIVAVQKIYGAPKGS--LGNNIYKIEVQ-----------QKDSPFIQTI 222
TPM DIVA+Q+IYG + G +Y ++S I T+
Sbjct: 226 YRNTPVTPMPLDIVAIQRIYGVAVDTPLSGGQVYGFNSNIAGPIAKYFDFTQNSRPIVTL 285
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
++ G + LD++ + IDL+ ++SS+ G + ++ IA T I+S + GND ++G
Sbjct: 286 WNKGVGNTLDVSGFTS-PSTIDLHDGAFSSVTGLKNDIAIAYGTRIDSAITGPGNDTIVG 344
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPS-----YLYKIYRFENAIIVYD-ANEHKQD 336
N +NV +GND G SG D + A I + A + + D
Sbjct: 345 NDNSNVIMAGAGNDSITGGSGNDHLYGAASRAVQGDGSDTITGGAGNDYLQGNAGDDRLD 404
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ +R++ V + + + G D + G D
Sbjct: 405 GGTGSDRIQGGQGNDSIVGNSGNDSVNGNLGSDTIDGGEGNDSLRGGQGGDSIQGGAGND 464
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
+ LG D G+ F +A D+I F
Sbjct: 465 VL------LGDLGDDTLAGGAGIDILTGGGDADVFAFATGDATFATSGALAYMTDMIADF 518
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
D D + +G S + G F T + +D
Sbjct: 519 TDGTDHIHLGFGVPSGVAYDPGAFDTLAQAVAAAQARLDGGAGFTDVA 566
>gi|325982056|ref|YP_004294458.1| Serralysin [Nitrosomonas sp. AL212]
gi|325531575|gb|ADZ26296.1| Serralysin [Nitrosomonas sp. AL212]
Length = 477
Score = 143 bits (361), Expect = 9e-32, Method: Composition-based stats.
Identities = 73/366 (19%), Positives = 127/366 (34%), Gaps = 56/366 (15%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELN---------PNAQEVARWALGEWSKV 65
+ LL +W++ + V + ++ + P + ++ +
Sbjct: 18 NDLLWGSHWNDPIAGTRLKVYIAGQGENEVFDFGGRAVTAHTVPQEITAFQKSIQFIENI 77
Query: 66 VDLTFEETSIHSDIKFI-----SSNNGYVCTPRYDSRYFMEINFDKA-----------DV 109
++ F + +D I +S+ G + ++
Sbjct: 78 CNIDFMIANSQADADIIVGVVGNSDAGGSLGTSVPPGEDVGPVVNRQGAVILNRDAYYST 137
Query: 110 WRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY--------PVYGVDNDYENDSFLTS 161
+ G +HE+GHA+GL HP G +G D+ + L +
Sbjct: 138 DYSSLQPGGYDFTTFIHELGHAVGLKHPHDSGGDGRPNFPGVTAPFGDYGDFNLNQGLYT 197
Query: 162 VMSYFMPQDSMMDA--------SFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQ 212
+MSY + + +GY TPM DI A+Q +YG+ GNN+Y +
Sbjct: 198 MMSYNDGWPAGPNGPLDPVSISGYGYEGTPMAFDIAALQFLYGSNTNFQTGNNVYTLGST 257
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT----------ESWSSIGGYEKNMTI 262
F I+D+ G D + + + IDL SS+ G TI
Sbjct: 258 NASGTFYSAIWDTKGIDTI--RNPSAIDSTIDLRGATLLHAAGGGGYLSSVDGINGGFTI 315
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A +E+ +G SG D +IGN N ++GND +G G DT + +
Sbjct: 316 ANGVTVENAIGGSGADTIIGNRVANTLTGNAGNDRINGLGGADTII--GGAGADMLAGGG 373
Query: 323 NAIIVY 328
A
Sbjct: 374 GADDFT 379
>gi|197105325|ref|YP_002130702.1| hypothetical protein PHZ_c1862 [Phenylobacterium zucineum HLK1]
gi|196478745|gb|ACG78273.1| hypothetical protein PHZ_c1862 [Phenylobacterium zucineum HLK1]
Length = 737
Score = 143 bits (360), Expect = 9e-32, Method: Composition-based stats.
Identities = 80/419 (19%), Positives = 142/419 (33%), Gaps = 44/419 (10%)
Query: 42 FDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF-----ISSNNGYVCTPRYDS 96
E AL E++ + + + T F ++ + G P+
Sbjct: 328 ITTYGWEDFQIEGVMRALQEYTPITGINYVRTDDIEQATFRLVTTVNQDFGAKFYPQDPG 387
Query: 97 -----RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
+ + G LHE GHA G+ HP GG + +
Sbjct: 388 LGDLQGLGIFNLISGGFTAPASLQPGGFSFGVVLHEFGHAHGVAHPHDNGGGSEIMLGVS 447
Query: 152 D------YENDSFLTSVMSYFMPQDSMMDAS---------FGYCATPMVSDIVAVQKIYG 196
D Y+ + + +VMSY + D + G+ T DI +Q YG
Sbjct: 448 DSSSLGIYDLNQGVYTVMSYNDGWQTHPDGTLEFSSKTWGSGWSGTLGAFDIAVLQARYG 507
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI--------GGVKNYIDLNTE 248
+ G+++Y+IE + + QTI+D+GG D + + +Y
Sbjct: 508 VHAHNAGDDVYQIES-LQRWSYYQTIWDTGGTDTIAYSGGRDAHIDLLAATLDYTPTGGG 566
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S + G TIA VIE+ G G+D ++GN+ N+ +G+D G +G D
Sbjct: 567 VVSFVNGVFGGFTIAGGVVIENATGGQGDDALMGNAVGNLLKGGTGDDTLIGRAGDDRLM 626
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + E A + D L E + + + +T +
Sbjct: 627 --GETGQDDLRGGEGADTL--EGGTGTDTLHGGE------GDDVLIGGTGKDVFVFTEAG 676
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ I + + + ++ + L DL + GS RG A ++
Sbjct: 677 TETIADYQKGELIDLSGLEDVTFADVSWTATAITVDLDGDADLIILVGSTRGLAQGDFL 735
>gi|254469098|ref|ZP_05082503.1| Bacterial pre-peptidase C-terminal domain family protein
[Pseudovibrio sp. JE062]
gi|211960933|gb|EEA96128.1| Bacterial pre-peptidase C-terminal domain family protein
[Pseudovibrio sp. JE062]
Length = 1111
Score = 143 bits (360), Expect = 9e-32, Method: Composition-based stats.
Identities = 98/499 (19%), Positives = 157/499 (31%), Gaps = 58/499 (11%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSI------- 75
+ R + L ++T LN P + A AL WS V L FE
Sbjct: 35 SALPRSLTPEIAAQPLVINVTGLNDYPEYKAAAIGALEVWSAVTPLQFEIVDDAPYDPDL 94
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
H + + S + I D G + + +HE GH GL
Sbjct: 95 HWMEVVSPAIGEQSDGSAFSSNRKVSIGQKFHDTEPNKTDIGGYVFDSFIHEFGHEFGLN 154
Query: 136 HPGSYNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
HPG YN P Y + + D SVMSYF D + + +TP+++DI +
Sbjct: 155 HPGLYNYSGPGGVQINYLNNATWIYDRQQYSVMSYFDGIDVG-ETTRWSASTPLMADIES 213
Query: 191 VQK------------IYGAPKGSLGNNIYKIEVQQKDS---------PFIQTIYDSGGDD 229
+ Y + G+NIY + TI+D+GG D
Sbjct: 214 TIRRFFSEVDEDGVRTYQKIDLNTGDNIYGFNSTEYGYELTSDGMQHDIGFTIHDTGGMD 273
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-------TVIESVVGSSGNDVVIG 282
+D + +DL +SS+ G+ N++I IE +GS+ +D++IG
Sbjct: 274 TIDFSG-STAGTILDLRAGQFSSVNGHSNNVSIFAGHNEDQTEYYIEKGIGSNYDDIIIG 332
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII-VYDANEHKQDFLSDV 341
N +NV G D G +G D +F + + + + ++ + +V
Sbjct: 333 NDGDNVLDGRGGADKMAGGAGDDIYFVDSIDDIVREEADGGNDTIIVVNSDLDLGEVENV 392
Query: 342 ERLRF-----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
E + + D + SI+ L G D +
Sbjct: 393 ENIIYVGGTPPQPPVEEDDTPANPGDTLTSIIFGDEGNNTLDGGAGGDTIFGLDGDDLII 452
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
GRD + D Y G L+ +
Sbjct: 453 G--GRDTLASRDINNTIPFDELEDQTESDDGNDVLYGGGGNDTIFGGAGDDILDGGDGDD 510
Query: 451 DLINAFADAPDLVQVGKDH 469
L+ G D
Sbjct: 511 TLMGQAGADVFRGGDGVDT 529
Score = 95.6 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 66/481 (13%), Positives = 120/481 (24%), Gaps = 49/481 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ G D + + +DL + S + + T I
Sbjct: 616 GNDILIGGSGQDYMNGGEGIDTVVYSG-SSDGVTVDLANGTASGGDADGPVQIVGRGTTI 674
Query: 269 --------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
E+VVGS +D +IGN N +GNDV G G D A S
Sbjct: 675 KHDIIVDVENVVGSFYDDHLIGNDQTNELSGGAGNDVLTGGEGADVLNGGAGSDTADYSD 734
Query: 321 FENAI-IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + + + D +E L + K + L + L G D+
Sbjct: 735 ATSGVKLNLARGKSEGDTYISIENLSGSGHNDKIKGNKAANTLTGQGGNDVLRGGGGDDI 794
Query: 380 FES--------------MKHFYEFG-----------LSEGRDITFDSYLYLGSYDDLRNV 414
+ G + + + + +
Sbjct: 795 LFGDFADQGEAIPRPGMGTGYATLGPDATNNSIATAFDISNNFSLTEDTDIFDSTTVLHT 854
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL-INAFADAPDLVQVGKDHFSNF 473
+ G Y + + G + D + ++V D +
Sbjct: 855 TVNATGNGKGGYYSIELAAGTIITIDIDGIADPNVHDSWVRLLDSDGNIVTQNDDGGGDP 914
Query: 474 GCEEGRFVTF------DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
G R + Y+ +V G A T+ +
Sbjct: 915 GSATNRDSSTVFVVEETGTYYILEGAWSPDVPGDGWSEAVPEGSTYKLNVSVEFPPEPIQ 974
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDR 587
A ++ L G D G + + F+ +L D F +D
Sbjct: 975 PGEAGNDKLYGGNGSDFLDGGLGAD--LLVGGKGEDTFRFSTELG-EDNVDRIKDFNTDE 1031
Query: 588 SAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
G ++ F A+ + +D L+ D G G
Sbjct: 1032 DVIMLDSNIFAELGG-DGPLALNAFHKSAA---GVSQDANDRIIYDTDSGALFYDADGSG 1087
Query: 648 N 648
+
Sbjct: 1088 D 1088
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/486 (11%), Positives = 110/486 (22%), Gaps = 60/486 (12%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E + + I N+ + + + I
Sbjct: 367 REEADGGNDTIIVVNSDLDLGEVENVENIIYVGGTPPQPPVEEDDTPANPGDTLTSIIFG 426
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G GG ++G+D D ++ S + D + D
Sbjct: 427 DEGNNTLDGGAGGDTIFGLDGDDLIIGGRDTLASRDINNTIPFDELEDQTES---DDGND 483
Query: 191 VQKIYGAPKG------SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
V G + + G D +D + + ++
Sbjct: 484 VLYGGGGNDTIFGGAGDDILDGGDGDDTLMGQAGADVFRGGDGVDTVDFSHESPFQLLVN 543
Query: 245 LN-----TESWSSIGGYEKNMTIAQHTVIESVVGSSGND--------------------- 278
L + S Y I I+ +G+ N+
Sbjct: 544 LETNVAVGGTASGDTFYSIENLIGSDDRIDRFIGTDDNNHFWGQGGGDVFNGGGGDDILD 603
Query: 279 ------VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI------- 325
++ G+ N++ SG D +G G+DT Y S +
Sbjct: 604 GGRDGDLLYGDEGNDILIGGSGQDYMNGGEGIDTVVYSGSSDGVTVDLANGTASGGDADG 663
Query: 326 ---IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
IV K D + DVE + + + Q + L A + L G DV
Sbjct: 664 PVQIVGRGTTIKHDIIVDVENVVGSFYDDHLIGNDQTNELSGGAGNDVLTGGEGADVLNG 723
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ + R D + + G + +
Sbjct: 724 GAGSDT--------ADYSDATSGVKLNLARGKSEGDTYISIENLSGSGHNDKIKGNKAAN 775
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
D++ L G + + + + + F
Sbjct: 776 TLTGQGGNDVLRGGGGDDILFGD-FADQGEAIPRPGMGTGYATLGPDATNNSIATAFDIS 834
Query: 503 RGAAAR 508
+
Sbjct: 835 NNFSLT 840
>gi|288959793|ref|YP_003450133.1| hypothetical protein AZL_a00580 [Azospirillum sp. B510]
gi|288962617|ref|YP_003452911.1| hemolysin-type calcium-binding protein [Azospirillum sp. B510]
gi|288912101|dbj|BAI73589.1| hypothetical protein AZL_a00580 [Azospirillum sp. B510]
gi|288914883|dbj|BAI76367.1| hemolysin-type calcium-binding protein [Azospirillum sp. B510]
Length = 427
Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats.
Identities = 62/178 (34%), Positives = 86/178 (48%), Gaps = 8/178 (4%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-FDSYLYLGSY 492
G D F L Y+A + DL + H+ G EGR T F+ Y YL Y
Sbjct: 178 GPAIDGFDPLRYLAGNADLARVIGTDS---AAARSHYIQSGAREGRSTTAFNPYQYLAGY 234
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
DL FGSD AA HYI G++EGR+ AF A Y+AS+ DL+ AF A
Sbjct: 235 GDLMAAFGSDAQAAGIHYIQSGLREGRSATAFNADAYLASNPDLLAAFGSD---RNAASR 291
Query: 553 HFSNFGYEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISG 609
H+ + G E R + F+ Y + D+ FG+D +AA +HY+ +G +E R +
Sbjct: 292 HYIDSGRAEQRRLDGFDATAYERANPDIAAAFGADLTAATRHYVEYGYREHRRTAVQP 349
Score = 127 bits (320), Expect = 5e-27, Method: Composition-based stats.
Identities = 67/207 (32%), Positives = 94/207 (45%), Gaps = 7/207 (3%)
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR--SILEYTASYEDLIQV 374
+ + Y N + + F + + L Y A DL +V
Sbjct: 140 AVMTNQGDWKPYSWNAVGVAVYKNSAAIWFGREADPTGGPAIDGFDPLRYLAGNADLARV 199
Query: 375 IGQDVFESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
IG D + H+ + G EGR T F+ Y YL Y DL FGSD AA HYI G++E
Sbjct: 200 IGTDSAAARSHYIQSGAREGRSTTAFNPYQYLAGYGDLMAAFGSDAQAAGIHYIQSGLRE 259
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG-RFVTFDSYLYLGSY 492
GR+ AF A Y+AS+ DL+ AF + H+ + G E R FD+ Y +
Sbjct: 260 GRSATAFNADAYLASNPDLLAAFGSDRN---AASRHYIDSGRAEQRRLDGFDATAYERAN 316
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGR 519
D+ FG+D AA RHY+ +G +E R
Sbjct: 317 PDIAAAFGADLTAATRHYVEYGYREHR 343
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 67/195 (34%), Gaps = 6/195 (3%)
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + Y++ A + + ++ + S Y AS DL
Sbjct: 221 STTAFNPYQYLAGYGDLMAAFGSDAQAAGIHYIQSGLREGRSATAFNADA--YLASNPDL 278
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ G D + +H+ + G +E R + FD+ Y + D+ FG+D AA RHY+ +G
Sbjct: 279 LAAFGSDRNAASRHYIDSGRAEQRRLDGFDATAYERANPDIAAAFGADLTAATRHYVEYG 338
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+E R A L AD+ ++ G V +
Sbjct: 339 YREHRRTAV---QPVAAQGAPLAGPGADSLQSSAPVEESDPMIGRLGEAPVDLTWTAGML 395
Query: 491 SYDDLRNVFGSDRGA 505
+ + G GA
Sbjct: 396 AAPLAAPLSGIGMGA 410
>gi|317447641|emb|CBJ55051.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 243
Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 73/207 (35%), Gaps = 16/207 (7%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFIS 83
+ F+ + N + A A+ W+ V ++TF E + D
Sbjct: 1 TYTFLTSATQSTMNKHGISGFSXFNTQQKAQAALAMQSWADVANVTFTEKTSGGDGHMTF 60
Query: 84 SNN--------GYVCTPRYDSRYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALG 133
N + P + Y + + + HEIGH LG
Sbjct: 61 GNYSSGQDGAAAFAYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLG 120
Query: 134 LMHPGSYNGGY-PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDI 188
L HPG YN G D Y D+ S+MSY+ ++ + S G Y + P++ DI
Sbjct: 121 LAHPGDYNAGNGNPTYNDATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDI 180
Query: 189 VAVQKIYGAP-KGSLGNNIYKIEVQQK 214
A+QK+YGA + Y
Sbjct: 181 AAIQKLYGANFNTRATDTTYGFNSNTG 207
>gi|148242008|ref|YP_001227165.1| hypothetical protein SynRCC307_0909 [Synechococcus sp. RCC307]
gi|147850318|emb|CAK27812.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 691
Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats.
Identities = 87/462 (18%), Positives = 131/462 (28%), Gaps = 56/462 (12%)
Query: 55 ARWALGEWSKVVDLTFEETSIHSDIKFI------------SSNNGYVCTPRYDSRYFMEI 102
R L ++DL F+E + + + S Y+
Sbjct: 165 IRSILARLDALIDLDFKEKADWDGSDIDIYCLYSHSGWDEDTVGSVENHGKGLSAYWDLY 224
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
D + V + +HEIGH LGL HP D +V
Sbjct: 225 WMDNSLVDSGSTKFTNYEKNTIVHEIGHVLGLSHPQERPYSKKWNDRD----------TV 274
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG----------SLGNNIYKIEVQ 212
MSY + + SDI A+Q+I+G ++ N ++
Sbjct: 275 MSYNK-------GGATWNSWFTHSDIKALQRIWGKENDHKDQLHQGKINIANKLFGENGN 327
Query: 213 QK--DSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
K T+ G+D++ D + G N I+LNT W + G +
Sbjct: 328 DKLFGGKKSDTLSGGMGNDIINGGSGRDTAVFSGRSNRINLNTTKWQNTGDGRDRL---- 383
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN- 323
IE+V GNDVV GN A N +GND G G DT + +N
Sbjct: 384 -ISIENVNVGGGNDVVTGNKAANTLNGQNGNDSLYGQLGNDTINGGSGRDTAVFSGLKNR 442
Query: 324 ---AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ +D L +E + K + L + L G D
Sbjct: 443 INLNTTRWQNTGDGRDRLISIENVNAGGGNDVVTGNKAANTLNGQNGNDVLYGAAGNDRL 502
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ + GRD + Y Y N Y G
Sbjct: 503 LGGRGDDRLHGNSGRDYLYGDSGYDQLYGYSGNDILKGGDGNDLLYGGTGFYMKERGTGN 562
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
L + L + G DH +
Sbjct: 563 DNLFGQGGDDWLYGSDGSDELFGGSGDDHLYGDLGNDKLVGG 604
Score = 87.1 bits (214), Expect = 7e-15, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 74/222 (33%), Gaps = 35/222 (15%)
Query: 203 GNNIYKIE---VQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSI 253
GN++ ++Y G+D + D + G+KN I+LNT W +
Sbjct: 394 GNDVVTGNKAANTLNGQNGNDSLYGQLGNDTINGGSGRDTAVFSGLKNRINLNTTRWQNT 453
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF------ 307
G + IE+V GNDVV GN A N +GNDV G++G D
Sbjct: 454 GDGRDRL-----ISIENVNAGGGNDVVTGNKAANTLNGQNGNDVLYGAAGNDRLLGGRGD 508
Query: 308 ----------FYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSV 354
+ Y S ++Y + I+ D L + +
Sbjct: 509 DRLHGNSGRDYLYGDSGYDQLYGYSGNDILKGG--DGNDLLYGGTGFYMKERGTGNDNLF 566
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
L + ++L G D + +G+D
Sbjct: 567 GQGGDDWLYGSDGSDELFGGSGDDHLYGDLGNDKLVGGQGKD 608
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/309 (15%), Positives = 95/309 (30%), Gaps = 12/309 (3%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
++ E ++ ++ N T + D G G+ T + +
Sbjct: 384 ISIENVNVGGGNDVVTGNKA-ANTLNGQNGNDSLYGQLGNDTINGGSGRDTAVFSGLKNR 442
Query: 128 IG-HALGLMHPGSY-NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
I + + G + + V+ ND + + + + D +G +
Sbjct: 443 INLNTTRWQNTGDGRDRLISIENVNAGGGNDVVTGNKAANTLNGQNGNDVLYGAAGNDRL 502
Query: 186 SDIVAVQKIYG--APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+++G G++ Y Q + G+DLL GG Y+
Sbjct: 503 LGGRGDDRLHGNSGRDYLYGDSGY---DQLYGYSGNDILKGGDGNDLL----YGGTGFYM 555
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ G + + + + G SG+D + G+ N+ G D G +G
Sbjct: 556 KERGTGNDNLFGQGGDDWLYGSDGSDELFGGSGDDHLYGDLGNDKLVGGQGKDKLWGQAG 615
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DTF +I F++ V R A V+ + +
Sbjct: 616 RDTFVLTKGVGHDRIMDFKDGQDRIQLLGSGISTFHIVNRNGHAYIYEGVVDGNKDLLAV 675
Query: 364 YTASYEDLI 372
+ +DL
Sbjct: 676 VNGAADDLQ 684
Score = 39.0 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 57/215 (26%), Gaps = 11/215 (5%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE---FGLSEGRDITFDSYLYLG 406
L + L +G D+ G S ++ + G
Sbjct: 318 ANKLFGENGNDKLFGGKKSDTLSGGMGNDIINGGSGRDTAVFSGRSNRINLNTTKWQNTG 377
Query: 407 SYDD-LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
D L ++ + G + N Y D IN + V
Sbjct: 378 DGRDRLISIENVNVGGGNDVVTGNKAANTLNGQNGNDSLYGQLGNDTINGGSGRDTAVFS 437
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
G + N + D L S +++ G+D +
Sbjct: 438 GLKNRINLNTTRWQNTG-DGRDRLISIENVNAGGGNDVVT-----GNKAANTLNGQNGND 491
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDH-FSNFGY 559
L A ++ L+ D +G+D+ + + GY
Sbjct: 492 VLYGAAGNDRLLGGRGDDRLHGNSGRDYLYGDSGY 526
>gi|258546038|ref|ZP_05706272.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
gi|258518695|gb|EEV87554.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
Length = 1549
Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats.
Identities = 79/442 (17%), Positives = 140/442 (31%), Gaps = 43/442 (9%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS---- 74
+ + F D + + + R L ++ V++ F E +
Sbjct: 1114 QGLNVTYAFATSPVDKDEPGKAMSGFDTYSETQKTAIRTVLDHIAEHVNVKFSEGNNATL 1173
Query: 75 -------IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
++ G V D G + ALHE
Sbjct: 1174 NFYKHTMDTAETVGYGVYGGGVHLSAERFTADDAFRNDIPYRITGGDAIEYYGWYAALHE 1233
Query: 128 IGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT-- 182
IGH LGL HP + G P V + + S ++ V +P + + +
Sbjct: 1234 IGHTLGLTHPFDHAKKGDGRPDLSVAENRDTISVMSYVNGETIPLRAGSNYYPEFPIAQN 1293
Query: 183 -PMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLTLIGGV 239
+ D+ A+ +G G++ Y + KD+ I+D GG D D +
Sbjct: 1294 KLGIFDLAALHHSFGVNPNYHSGDDTYTFKEFNKDAVGNDIYIHDGGGLDTFDASEQTLD 1353
Query: 240 KNYIDLNTESW-------------SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
N IDL SW + M I T IE+ G +GND + GNSA+
Sbjct: 1354 LN-IDLTPGSWIYAGEKTAHLALNDDLTPTHGQMFIGYGTQIENAKGGTGNDTIKGNSAD 1412
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
N F G+D DG +G D + + A A+ + F
Sbjct: 1413 NHLFGFDGDDHLDGGAGNDQL--EGGRGADTLTGGKGADTFIFASPLDG-KADTILDFNF 1469
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH--FYEFGLSEGRDITFDSYLY 404
+ + ++ + L+ D V+G+ ++ H + ++ +D
Sbjct: 1470 NEGDVLQLDHNIFTALQSGTLAAD-QFVLGKAAQDANDHLIYDRATG----ELAYDPDGS 1524
Query: 405 LGSYDDLRNVFGSDRGAAARHY 426
+ G++ +
Sbjct: 1525 GAAAAVTIARLGANHDLENTNI 1546
Score = 47.1 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 46/148 (31%), Gaps = 17/148 (11%)
Query: 510 YITHG--VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF-------SNFGYE 560
+I +G ++ + ++ ++ L D AG D + G +
Sbjct: 1387 FIGYGTQIENAKGGTGNDTIKGNSADNHLFGFDGDDHLDGGAGNDQLEGGRGADTLTGGK 1446
Query: 561 EGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSE 620
+ F L + L F H I ++ G ++ QF
Sbjct: 1447 GADTFIFASPLDGKADTILDFNFNEGDVLQLDHNIFTALQSG---TLAADQFVLG----- 1498
Query: 621 KSRDKADLSLSFDHKKVDLYTDYFGDGN 648
K+ A+ L +D +L D G G
Sbjct: 1499 KAAQDANDHLIYDRATGELAYDPDGSGA 1526
>gi|163736817|ref|ZP_02144235.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
BS107]
gi|161389421|gb|EDQ13772.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
BS107]
Length = 1112
Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats.
Identities = 93/454 (20%), Positives = 150/454 (33%), Gaps = 57/454 (12%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSI------- 75
R + L ++T LN P ++ A AL WS V L FE
Sbjct: 36 GALGRSLTPEIAAEPLVINLTGLNDHPAYKDAAIGALEMWSSVTPLQFEIVDDAPYDADL 95
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
H + S ++ + D G + +HE GH GL
Sbjct: 96 HWMEVVSPEIGEQSDGSAFSSDRYVSVGQRFHDTEPDITDLGGYVFDTFVHEFGHEFGLN 155
Query: 136 HPGSYNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
HPG YN P Y + + D SVMSYF D D + TP++ DI A
Sbjct: 156 HPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGEDTRW-SAVTPLMGDIEA 214
Query: 191 VQK------------IYGAPKGSLGNNIYKIEVQQKDS---------PFIQTIYDSGGDD 229
+ + Y + +N Y + I+D+GGDD
Sbjct: 215 IIRRYFSTVDDEGVRTYQTINLNTDDNTYGFNSSEYGYLLTEDGPQHDIGFVIHDTGGDD 274
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-------TVIESVVGSSGNDVVIG 282
+D + +DL +SS+ G+ N++I +E+ +GSS +D++IG
Sbjct: 275 TIDFSG-STASTILDLRAGEFSSVNGHNNNVSIFAGHNADQTEYYVETGIGSSYDDILIG 333
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII-VYDANEHKQDFLSDV 341
N +NV +GND G+ G D +F + + + + A+ +++V
Sbjct: 334 NDGDNVLDGRAGNDRMAGNGGDDVYFVDSIDDIVREDENGGNDTVIVVADGLDLGDIANV 393
Query: 342 ERLRFADQC------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
E + +A + S++ S E L G +
Sbjct: 394 ETIIYAGGTPGTPGSDAPDAPNEGPTDALDSLIIGDDSNETLDGGAGGNTIFGRGGDDLI 453
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ D + D D A
Sbjct: 454 IGGRDTLASRDINNTIDIADLEDQTETDDGNDAL 487
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/484 (11%), Positives = 117/484 (24%), Gaps = 52/484 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G D + T +DL + + + T I
Sbjct: 618 GDDVLIGGSGQDYLDGGAGVDTVVYTASSVGV-TVDLENGTARGGDADGPVQIVGRGTTI 676
Query: 269 --------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
E+ VGS +D +IG + N +G+DV G G D A S
Sbjct: 677 RHDIIVDVENAVGSLHDDHLIGTNGENNLSGGAGDDVLSGGGGADLLDGGAGSDTADYAN 736
Query: 321 -FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + D +E L + ++L + L G D+
Sbjct: 737 ATRGVKLNMTNGKTEGDTYVSIENLSGSGFNDRMKGDAADNVLTGQGGNDTLRGAAGDDI 796
Query: 380 FES--------------MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ G + ++ ++ + D +
Sbjct: 797 LLGDFADAADAIPQPGLGTGYATLGPDATNNSIETAFDISDNFSLTEDPDIFDSTSVLHT 856
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF-------SNFGCEEG 478
+ + D+ V ++ G +
Sbjct: 857 TVNATGNGQGGYYSIDLAAGTVLTIDIDGIADPNVHDSWVRLLDGEGNIVTQNDDGGGDP 916
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE---------- 528
+ + ++ F + + G E + L
Sbjct: 917 GSTSNRDSSTVFVVEETGTYFIVEGSWSPD--APEGWSESVPEGSTYELNVSVEFPPAPA 974
Query: 529 --YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
A + L + D + G + F+ +L + D++ + +
Sbjct: 975 QPGEAGADVLRGGRGNDLLDGGLMAD--TLIGGKGDDFFRFSTELGADNIDEIRDFDAAS 1032
Query: 587 RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ I E I + F + + + + + ++ L D G
Sbjct: 1033 DTILLDSAIFSEAGE-----IGVLDFGAFHSSASGTALDGADRIVYNTDSGALSYDADGL 1087
Query: 647 GNYY 650
G
Sbjct: 1088 GGVD 1091
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 44/336 (13%), Positives = 87/336 (25%), Gaps = 51/336 (15%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT-----IAQHTVIE 269
+ G D +D + + ++L T S I I+
Sbjct: 516 GQAGVDVFRGGAGIDTVDFSQESPFQLLVNLETNVASGGTASGDTFYSIENLIGSDDRID 575
Query: 270 SVVGSSGND---------------------------VVIGNSANNVFFESSGNDVFDGSS 302
+G+S N+ ++ G ++V SG D DG +
Sbjct: 576 RFIGTSDNNHFWGQGGGDVFNGGGGDDTLDGGNDGDMLYGEDGDDVLIGGSGQDYLDGGA 635
Query: 303 GLDTFFYYAPSYLYKIYRFENAI----------IVYDANEHKQDFLSDVERLRFADQCID 352
G+DT Y A S + IV + D + DVE +
Sbjct: 636 GVDTVVYTASSVGVTVDLENGTARGGDADGPVQIVGRGTTIRHDIIVDVENAVGSLHDDH 695
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
+ + L A + L G D+ + + ++ +
Sbjct: 696 LIGTNGENNLSGGAGDDVLSGGGGADLLDGGAGSDTADYA-------NATRGVKLNMTNG 748
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
G + + + A L ++ L A D L ++
Sbjct: 749 KTEGDTYVSIENLSGSGFNDRMKGDAADNVLTGQGGNDTLRGAAGDDILLGD--FADAAD 806
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ G + + + + + F +
Sbjct: 807 AIPQPGLGTGYATLGPDATNNSIETAFDISDNFSLT 842
>gi|257092498|ref|YP_003166139.1| Serralysin [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
gi|257045022|gb|ACV34210.1| Serralysin [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 1598
Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats.
Identities = 93/367 (25%), Positives = 127/367 (34%), Gaps = 33/367 (8%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKFI 82
+ F + + LS LN Q A AL W ++ T+ S+I+F
Sbjct: 6 TYAFPTAASGIYGSQELS-GFVGLNAQQQAQAERALQTWDDLIAPDMVRTTATTSNIEFG 64
Query: 83 SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
+S G Y + F ++ G +HEIGHALGL H G YNG
Sbjct: 65 TSTTGVSYAHAYFPTT-GSVWFSRSYADLMSPQVGQHSFMAYVHEIGHALGLDHMGDYNG 123
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDS------------MMDASFGYCATPMVSDIVA 190
DS + SVMSYF P + D TPMV+D++A
Sbjct: 124 SGSWTP---SSYEDSGVYSVMSYFGPNMNSGSGQVAWADWVGADGKLYSPQTPMVNDVMA 180
Query: 191 VQKIYGA-PKGSLGNNIYKIEVQQKDS-----------PFIQTIYDSGGDDLLDLTLIGG 238
+Q IYGA G+ +Y + I TIYDS G D L+L+
Sbjct: 181 IQAIYGAETTTRTGDTVYGFGSNVTGAMAPIFDFTLNANPIVTIYDSAGIDTLNLSGWNT 240
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
I+L S+SS N+ IA IE+ VG S D + GN N +GND
Sbjct: 241 AC-TINLAPGSYSSGNSMTYNIAIAYTCDIENAVGGSAGDQITGNLLANRLDGGAGNDTL 299
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G G D A + + E V + +
Sbjct: 300 SGGGGDDVLV--AGAGDDVLDGGEGTDSVVFSGTWGAYSYTCTNLYATTFAFTFYGAATG 357
Query: 359 RSILEYT 365
L
Sbjct: 358 TDTLRGI 364
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 53/468 (11%), Positives = 119/468 (25%), Gaps = 30/468 (6%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
++ E ++ + + N T ++ AD+ G G + N
Sbjct: 983 ILGANLENLTLLGNGNLAGTGNALNNTLIGNAGANRLDGGQGADILLGGAGDDRYVVDNL 1042
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
++ G V N + ++ + +A
Sbjct: 1043 GDKVYETTTSTSAYDAGGIDTVDSSINWTLGNFVENLTLTGSGNLSGIGNALANTLRGNA 1102
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+++ + G G++IY + + + +GG D + +
Sbjct: 1103 GINVLDGKAGVDVLDGGEGSDIYLVGLASDHAAAEIADSGNGGSDEVRFAASSSGTLTLF 1162
Query: 245 LNTESWSSIGGYEK----------------------NMTIAQHTVIESVVGSSGNDVVIG 282
+ +++ + + G++ D + G
Sbjct: 1163 AGDTGIERVVIGSGLGEVAVSSGTLALDVDASRVANALSVLGNAGANVLTGTAYADRLDG 1222
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + G D G +G D + + + + + I + +++E
Sbjct: 1223 GAGADRLIGGGGADTLIGGAGNDVYVVDSGDAIIEASTLA-SEIDRVESYVDWILGANLE 1281
Query: 343 RLR-FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
L + + L A L G D+ + + D +++
Sbjct: 1282 NLTLLGTGNLAGTGNALNNTLTGNAGANRLDGGQGADILLGGAGDDRYVVDNLGDKVYET 1341
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI--ASHEDLINAFADA 459
YD G+D ++ ++ E L I A L
Sbjct: 1342 TTSTSQYD----AGGTDTVDSSINWTLGNFVENLTLTGSGNLSGIGNALANTLRGNAGIN 1397
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ G D + V S D N + AA
Sbjct: 1398 VLDGKAGVDVLDGGEGSDIYLVGLASDHAAAEIADSGNGGSDEVRFAA 1445
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 42/434 (9%), Positives = 96/434 (22%), Gaps = 55/434 (12%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL--GLMHPGSYNGGYPVYGVDN 151
S + G G+I E + + + V +
Sbjct: 425 NWSLSGTGSSAADPASDFSGATSGSITFQVGETEKTIQIYARGDTSVEADEHFTVTLSNP 484
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN-NIYKIE 210
+S + D+ T ++ G+ +++++
Sbjct: 485 SAGLKFASSSAQGTILNDDTSSGGDDFGSTTASAGNLAVNGGAVSGAIERAGDLDLFRVN 544
Query: 211 VQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWS------------- 251
+ + + G D T + V + ++ + S
Sbjct: 545 LNAGVTYVFDLVATGSGVDPYLSLYATTATSLSAVASNDNVRAGTSSAQITYTASSSATY 604
Query: 252 -----SIGGYEKNMTIAQHTVIE-SVVGSSGNDVVIGNSANNVFFESSGNDVF------- 298
+ TI+ T ++ G + ++G ++V + G DV
Sbjct: 605 YLLARDTWTGTGSYTISAITFAGRTITGDEAANRLVGTLGDDVLYGLGGADVLSGDGGDD 664
Query: 299 -----------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
G +G D + + I + +++E L
Sbjct: 665 RLDGGSGADAMSGGNGNDIYVVDNVADSVSETSAAGG-IDRVESSVSFTLGTNLENLVLT 723
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ + L G ++ + F G D +
Sbjct: 724 GNADSNGT--------GNSQNNQLTGNSGNNILDGKAGLDTFAGGLGNDTYLLDMEGELA 775
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
G+D + + + S L N + G
Sbjct: 776 NVTENAGQGTDTLTVVYANTSAVKSIALTGNLANIENVLLSGAGLFNVLGNGLANALTGN 835
Query: 468 DHFSNFGCEEGRFV 481
+ G
Sbjct: 836 ASVNRLEGAAGNDT 849
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 38/122 (31%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ + N I+ + G + ++ + + S+ G
Sbjct: 1437 GSDEVRFAANTSGTLTLFAGDTGIERVVIGSGLGEVAVSSGTLALDVDASRVANALSLLG 1496
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ +++ G +G D +IG N+ +GND G +G D F
Sbjct: 1497 NAGANVLTGTAYADTLDGGAGADRLIGGDGNDRLIGGAGNDTLTGGAGADQFVLTQALSS 1556
Query: 316 YK 317
Sbjct: 1557 TT 1558
>gi|163743675|ref|ZP_02151050.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
2.10]
gi|161383042|gb|EDQ07436.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
2.10]
Length = 1112
Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats.
Identities = 93/454 (20%), Positives = 151/454 (33%), Gaps = 57/454 (12%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEETSI------- 75
R + L ++T LN P ++ A AL WS V L FE
Sbjct: 36 GALGRSLTPEIAAEPLVINLTGLNDHPAYKDAAIGALEMWSSVTPLQFEIVDDAPYDADL 95
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
H + S ++ + D G + +HE GH GL
Sbjct: 96 HWMEVVSPEIGEQSDGSAFSSDRYVSVGQRFHDTEPDITDLGGYVFDTFVHEFGHEFGLN 155
Query: 136 HPGSYNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
HPG YN P Y + + D SVMSYF D D + TP++ DI A
Sbjct: 156 HPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGEDTRW-SAVTPLMGDIEA 214
Query: 191 VQK------------IYGAPKGSLGNNIYKIEVQQKDS---------PFIQTIYDSGGDD 229
+ + Y + +N Y + I+D+GGDD
Sbjct: 215 IIRRYFSTVDDEGVRTYQTINLNTDDNTYGFNSTEYGYLLTEDGPQHDIGFVIHDTGGDD 274
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-------TVIESVVGSSGNDVVIG 282
+D + +DL +SS+ G+ N++I +E+ +GSS +D++IG
Sbjct: 275 TIDFSG-STASTILDLRAGEFSSVNGHNNNVSIFAGHNADQTEYYVETGIGSSYDDILIG 333
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII-VYDANEHKQDFLSDV 341
N +NV +GND G+ G D +F + + + + A+ +++V
Sbjct: 334 NDGDNVLDGRAGNDRMAGNGGDDVYFVDSIDDIVREDENGGNDTVIVVADGLDLGDIANV 393
Query: 342 ERLRFADQCIDSVNVKQ------------RSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
E + +A + S++ S E L G + +
Sbjct: 394 ETIIYAGGTPGTPGSDAPDAPNEGPTDATDSLIIGDDSNETLDGGAGGNTIFGLGGDDLI 453
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ D + D D A
Sbjct: 454 IGGRDTLASRDINNTIDIADLEDQTETDDGNDAL 487
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 57/484 (11%), Positives = 115/484 (23%), Gaps = 52/484 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G D + T +DL + + + T I
Sbjct: 618 GDDVLIGGSGQDYLDGGAGVDTVVYTASSVGV-TVDLENGTARGGDADGPVQIVGRGTTI 676
Query: 269 --------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
E+ VGS +D +IG + N +G+DV G G D A S
Sbjct: 677 RHDIIVDVENAVGSLHDDHLIGTNGENALSGGAGDDVLSGGGGADLLDGGAGSDTADYAN 736
Query: 321 -FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + D +E L + ++L + L G D+
Sbjct: 737 ATRGVKLNMTNGKTEGDTYVSIENLSGSGFNDRMKGDAADNVLTGQGGDDTLRGAAGDDI 796
Query: 380 FES--------------MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ G + ++ ++ + D +
Sbjct: 797 LLGDFADAADAIPQPGLGTGYATLGPDATNNSIETAFDISDNFSLTEDPDIFDSTSVLHT 856
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ + D+ P++ G +
Sbjct: 857 TVNATGNGQGGYYSIDLAAGTVLTIDID--GIADPNVHDSWVRLLDGEGNIVTQNDDGGG 914
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITH-------GVKEGRNPDAFKALE---------- 528
S D VF + G E + L
Sbjct: 915 DPGSTSNRDSSTVFVVEETGTYFIVEGSWSPDAPEGWSESVPEGSTYELNVSVEFPPAPA 974
Query: 529 --YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
A + L + D + G + F+ +L + D++ + +
Sbjct: 975 QPGEAGADVLRGGRGNDLLDGGLMAD--TLIGGKGDDFFRFSTELGADNIDEIRDFDAAS 1032
Query: 587 RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ I E I + F + + + + + ++ L D G
Sbjct: 1033 DTILLDSAIFTEAGE-----IGVLDFGAFHSSASGTALDGGDRIVYNTDSGALSYDADGL 1087
Query: 647 GNYY 650
G
Sbjct: 1088 GGVD 1091
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 44/321 (13%), Positives = 78/321 (24%), Gaps = 49/321 (15%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT-----IAQHTVIE 269
+ G D +D + + ++L T S I I+
Sbjct: 516 GQAGVDVFRGGAGIDTVDFSQESPFQLLVNLETNVASGGTASGDTFYSIENLIGSDDRID 575
Query: 270 SVVGSSGND---------------------------VVIGNSANNVFFESSGNDVFDGSS 302
+G+S N+ ++ G ++V SG D DG +
Sbjct: 576 RFIGTSDNNHFWGQGGGDVFNGGGGDDTLDGGNDGDMLYGEDGDDVLIGGSGQDYLDGGA 635
Query: 303 GLDTFFYYAPSYLYKIYRFENAI----------IVYDANEHKQDFLSDVERLRFADQCID 352
G+DT Y A S + IV + D + DVE +
Sbjct: 636 GVDTVVYTASSVGVTVDLENGTARGGDADGPVQIVGRGTTIRHDIIVDVENAVGSLHDDH 695
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG-RDITFDSYLYLGSYDDL 411
+ + L A + L G D+ + + R + + D
Sbjct: 696 LIGTNGENALSGGAGDDVLSGGGGADLLDGGAGSDTADYANATRGVKLNMTNGKTEGDTY 755
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL------INAFADAPDLVQV 465
++ A+ +D+ A A +
Sbjct: 756 VSIENLSGSGFNDRMKGDAADNVLTGQGGDDTLRGAAGDDILLGDFADAADAIPQPGLGT 815
Query: 466 GKDHFSNFGCEEGRFVTFDSY 486
G FD
Sbjct: 816 GYATLGPDATNNSIETAFDIS 836
>gi|227818410|ref|YP_002822381.1| outer membrane secretion protein [Sinorhizobium fredii NGR234]
gi|227337409|gb|ACP21628.1| putative outer membrane secretion protein [Sinorhizobium fredii
NGR234]
Length = 1113
Score = 140 bits (352), Expect = 9e-31, Method: Composition-based stats.
Identities = 116/603 (19%), Positives = 187/603 (31%), Gaps = 82/603 (13%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELN--PNAQEVARWALGEWSKVVDLTFEET-------SI 75
R + L ++ ELN P + A AL W+ V L FE +
Sbjct: 36 GALPRSLTPEIAAGTLRINVYELNDHPEYKAAAIGALEMWASVTPLKFEIVDDAPFDSTT 95
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
Y S ++ I D G + + +HE GH GL
Sbjct: 96 DWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLN 155
Query: 136 HPGSYNGGYP-----VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
HPG YN P Y + + D SVMSYF D + + +TP+++DI A
Sbjct: 156 HPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVG-ETTRWSASTPLMADIEA 214
Query: 191 VQK------------IYGAPKGSLGNNIYKIEVQQKDS---------PFIQTIYDSGGDD 229
V + Y + + G+N+Y Q I+D+GG D
Sbjct: 215 VIRRFFSTVDANGVRTYQHIELNTGDNVYGFGSTQYGYQLTSSGMQHDIGFVIHDTGGTD 274
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-------TVIESVVGSSGNDVVIG 282
+D + +DL +SS+ G+ N++I +E+ +GSS +D++IG
Sbjct: 275 TIDFSG-STAGTILDLRAGQFSSVNGHSNNVSIFAGHNADQTDYYVENGIGSSYDDILIG 333
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-KQDFLSDV 341
N N G D G+ G D +F + + + V + H K +++V
Sbjct: 334 NDGANTLDGRGGGDRMAGNGGDDIYFVDSWDDIVREEANGGNDTVILLSRHLKIRKIANV 393
Query: 342 ERLRFADQCIDSVNVKQRSI------------LEYTASYEDLIQVIGQDVFESMKHFYEF 389
E + +AD+ + + L G D
Sbjct: 394 ENIIYADESTTEPGDGGDETPPSVGDDTMTSIIIGGDGNDTLDGGAGDDTIFGQGGDDLI 453
Query: 390 GLSEG----RDITF--------DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
RDI D D L G+D + +G +
Sbjct: 454 VGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGDGDDT 513
Query: 438 ----DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY- 492
D A + + + L+ + ++ G G Y
Sbjct: 514 LSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASG------DTFYSIENL 567
Query: 493 --DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
D R AA + G D L+ + L D + AG
Sbjct: 568 IGSDDRIDRFIGTAAANHFWGQGGGDYFNGGDGNDILDGGNDGDILYGEAGDDTIIGGAG 627
Query: 551 KDH 553
+D+
Sbjct: 628 QDY 630
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 68/499 (13%), Positives = 125/499 (25%), Gaps = 67/499 (13%)
Query: 200 GSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ G+ +Y + + G+D + IDL + S G
Sbjct: 607 GNDGDILYGEAGDDTIIGGAGQDYLDGGSGNDTVVYAG-SPDGVTIDLANGTASGGDGDG 665
Query: 258 KNMTIAQHTVI--------ESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDG 300
+ + I E+ VGSS D +IGN+ N +G+ D +G
Sbjct: 666 PVQIVGRGAAIRHDILAGFENAVGSSFEDHLIGNALANELSGGAGDDTLTGGGGADRLNG 725
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+G DT Y + D +E L + +
Sbjct: 726 GAGSDTADYADA--------TSGVRLGLSGGRSGGDRYVSIENLAGSGFNDRLTGNDAAN 777
Query: 361 ILEYTASYEDLIQVIGQDVFES--------------MKHFYEFG-----------LSEGR 395
+L + + G D + G
Sbjct: 778 VLTGQGGNDAIDGGRGDDTLLGDFAYQGDAPPRPGMGTGYATLGPDATNNSVATAFDISN 837
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL-IN 454
+ + + + + + + G Y + G + D +
Sbjct: 838 NFSLTADPDIFDSTTVLHTTVNATGNGQGGYYKIDLAAGTVITIDIDGIADPNVHDSWVR 897
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTF------DSYLYLGSYDDLRNVFGSDRGAAAR 508
A ++V D + G R + Y+ G A
Sbjct: 898 LLDSAGNIVAQNDDGGGDPGSTSSRDSSLVFVVQESGPYYILEGSWSPTAPGDGWAEAVP 957
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
T+ + A +A + L D + G E + F+
Sbjct: 958 AGSTYELNVSVEFPPAPAQPGVAGSDTLNGGGGSDLLDGGLAAD--TLTGGEGEDAFRFS 1015
Query: 569 PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADL 628
+L + D + + D + + I G ++ F AD
Sbjct: 1016 TELGNGNVDWIRDFRVIDDTILLDNLIF--ESVGADGALALGAFYGSAG---GVAHDADD 1070
Query: 629 SLSFDHKKVDLYTDYFGDG 647
+ +D L D G G
Sbjct: 1071 RIIYDTDSGVLSYDADGAG 1089
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 58/462 (12%), Positives = 113/462 (24%), Gaps = 33/462 (7%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI--NFDKADVWRYGIGKGTILSHNALH 126
E + + G P I D D G G TI
Sbjct: 392 NVENIIYADESTTEPGDGGDETPPSVGDDTMTSIIIGGDGNDTLDGGAGDDTIFGQGGDD 451
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
I G S + + D + + +S + Y + + G
Sbjct: 452 LIVG--GRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGD 509
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKD--------SPFIQTIYDSGGDDLLDLTLIGG 238
+ G G + ++ ++ + + + + GD + + G
Sbjct: 510 GDDTLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFYSIENLIG 569
Query: 239 VKNYID--LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ ID + T + + G + + G + D++ G + ++ +G D
Sbjct: 570 SDDRIDRFIGTAAANHFWGQGGGDYFNGGDGNDILDGGNDGDILYGEAGDDTIIGGAGQD 629
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAI----------IVYDANEHKQDFLSDVERLRF 346
DG SG DT Y I IV + D L+ E
Sbjct: 630 YLDGGSGNDTVVYAGSPDGVTIDLANGTASGGDGDGPVQIVGRGAAIRHDILAGFENAVG 689
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ + + L A + L G D +
Sbjct: 690 SSFEDHLIGNALANELSGGAGDDTLTGGGGADRLNGGAGSDT--------ADYADATSGV 741
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
G DR + + G + + + D I+ L+
Sbjct: 742 RLGLSGGRSGGDRYVSIENLAGSGFNDRLTGNDAANVLTGQGGNDAIDGGRGDDTLLGDF 801
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
G + + + + + F +
Sbjct: 802 AYQGDAP-PRPGMGTGYATLGPDATNNSVATAFDISNNFSLT 842
>gi|119358104|ref|YP_912748.1| lipase, class 3 [Chlorobium phaeobacteroides DSM 266]
gi|119355453|gb|ABL66324.1| lipase, class 3 [Chlorobium phaeobacteroides DSM 266]
Length = 2133
Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats.
Identities = 87/599 (14%), Positives = 160/599 (26%), Gaps = 42/599 (7%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ + AD GIG T + + +L + +
Sbjct: 1522 TGAGDDALLGGAGNDILDGGSGADSMAGGIGDDTYVVNYSLDVVTENADEGTDLVKSSTS 1581
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
G ++ + + D+ + + G + + G G
Sbjct: 1582 WTLGDHVEHLELTGTANTRGTGNELDNRITGNIGSNMLAGDAGKDTLLGGAGNDTLDGGT 1641
Query: 205 NIYKIEVQQKDSPFIQ-------TIYDSGGDDLLDLTLI---GGVKNYIDLNTESWSSIG 254
+ D ++ T Y G DL+ + G +++L+ + +
Sbjct: 1642 GADSMAGGIGDDTYVVDDILDVVTEYAGEGTDLVKSSTSWTLGDHVEHLELSGTANTRGT 1701
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E + I + + G +G D ++G + N+ SG D G G DT+
Sbjct: 1702 GNELDNRITGNIGSNMLAGDAGKDTLLGGAGNDALDGGSGADSMVGGIGDDTYVVNYS-- 1759
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQ 373
L + + I + ++VE L + + + L+
Sbjct: 1760 LDVVTENADEGIDLVQSSTGWTLGANVEHLELTGTANTRGTGNELDNRITGNSGKNTLVG 1819
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D + EG D+ Y G D ++ + E
Sbjct: 1820 GAGNDTLDGGSGADSMAGGEGDDVY--VVNYSLDVVTENADEGIDLVQSSTGWTLGANVE 1877
Query: 434 GRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+ D + + G D + Y+ +
Sbjct: 1878 NLELTGTANTRGTGNDLDNRITGNSGKNTLIGGAGNDTLDGGSGADSMVGGIGDDTYVVN 1937
Query: 492 YDD-------------LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED--- 535
Y +++ G GA H G R I +
Sbjct: 1938 YSLDVVTENADEGIDLVQSSTGWTLGANVEHLELTGTANTR-GTGNDLDNVITGNSGKNY 1996
Query: 536 LINAFADAPDLVQAGKD-HFSNFGYEE-----GRSITFNPDLYLTSYDDLWNVFGSDRSA 589
L + L AG D + G +E GR + + + + +D +A
Sbjct: 1997 LAGEEGEDILLGGAGADTLYGGMGADELTGGTGRDVFLYNNSSESGITEGAWDVITDFTA 2056
Query: 590 AAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
G+ GI+G Q S L L FD LY + GD +
Sbjct: 2057 GFDRLDLSGID--ANTGIAGNQSFSSDILGSGDAFSEAGQLRFDSGSGVLYGNTDGDAD 2113
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/385 (13%), Positives = 115/385 (29%), Gaps = 25/385 (6%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE 72
+ L ++ + D S D+ N + + W+ ++ E
Sbjct: 1731 AGNDALDGGSGADSMVGGIGDDTYVVNYSLDVVTENADEGIDLVQSSTGWTLGANVEHLE 1790
Query: 73 TSIHSDIKFISS-------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ ++ + + N T + AD G G + + +L
Sbjct: 1791 LTGTANTRGTGNELDNRITGNSGKNTLVGGAGNDTLDGGSGADSMAGGEGDDVYVVNYSL 1850
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+ + G + + + + D+ + + G
Sbjct: 1851 DVVTENADEGIDLVQSSTGWTLGANVENLELTGTANTRGTGNDLDNRITGNSGKNTLIGG 1910
Query: 186 SDIVAVQKIYGAPK--GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI---GGVK 240
+ + GA G +G++ Y + + T G DL+ + G
Sbjct: 1911 AGNDTLDGGSGADSMVGGIGDDTYVVNYSLD----VVTENADEGIDLVQSSTGWTLGANV 1966
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+++L + + G + + I ++ + G G D+++G + + + G D G
Sbjct: 1967 EHLELTGTANTRGTGNDLDNVITGNSGKNYLAGEEGEDILLGGAGADTLYGGMGADELTG 2026
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+G D F Y S A + DF + +RL + ++ +S
Sbjct: 2027 GTGRDVFLYNNSSESGITEG---------AWDVITDFTAGFDRLDLSGIDANTGIAGNQS 2077
Query: 361 ILEYTASYEDLIQVIGQDVFESMKH 385
D GQ F+S
Sbjct: 2078 FSSDILGSGDAFSEAGQLRFDSGSG 2102
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 44/344 (12%), Positives = 89/344 (25%), Gaps = 28/344 (8%)
Query: 224 DSGGDDLL--DLTLIGGVKNYIDLNTESWSS-----------IGGYEKNMTIAQH--TVI 268
GG D D + N+I+ + I +
Sbjct: 792 GQGGTDTFYADWSGKSVAVNWINTGEAYIYEGVTVSNVERLLLQTGSGADVIDNTAFSTN 851
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL---YKIYRFENAI 325
+ V +GND + N+ +GNDV + G DT + +Y++ +
Sbjct: 852 DDVRTGAGNDTISVGWGNDYIDGGAGNDVLNPGGGNDTVDAGSGDDTVNMVAVYQYTQSD 911
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
++ + L D I + + L + ++
Sbjct: 912 VLDGGSGTDTLNLDYTSEWYSYDYWSYYDGGFDYGIYDAEDTRTTLASGSSLNDIQTALS 971
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
+ +G++ + ++ N+ GS + D F A
Sbjct: 972 TAVKTVFDGQNTDVSVSNF-----EILNLKGSQTDNLLIFQMVGSYDGQGGTDTFYADWS 1026
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
S +A V + + G + DD+R G+D +
Sbjct: 1027 GKSVAVNWINTGEAYIYEGVTVSNVERLLLQTGSGADVIDNTAFSTNDDVRTGAGNDTIS 1086
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
+ G L ++ + D + A
Sbjct: 1087 -----VGWGNDYIDGGAGNDVLNPGGGNDTVDAGSGDDTVNMVA 1125
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 37/132 (28%), Gaps = 16/132 (12%)
Query: 224 DSGGDDLL--DLTLIGGVKNYIDLNTESWSS-----------IGGYEKNMTIAQH--TVI 268
GG D D + N+I+ + I +
Sbjct: 1236 GQGGTDTFYADWSGKSVAVNWINTGEAYIYEGVTVSNVERLLLQTGSGADVIDNTAFSTN 1295
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-KIYRFENAIIV 327
+ V +GND + N+ +GNDV + G DT + + ++
Sbjct: 1296 DDVRTGAGNDTISVGWGNDYIDGGAGNDVLNPGGGNDTVDAGSGDDTVNMVAVYQYTQSD 1355
Query: 328 YDANEHKQDFLS 339
D L+
Sbjct: 1356 VLDGGSGTDTLN 1367
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 42/318 (13%), Positives = 87/318 (27%), Gaps = 16/318 (5%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + LN + Y ++ + + + + G GND + G ++
Sbjct: 602 DYYWSFQNISLESLNIPLFREGLDYSDDVIVGLYAEDDIMNGYGGNDTMEGRGGDDEINP 661
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GND D SG DT + +Y++ + ++ + L D
Sbjct: 662 GGGNDTVDAGSGDDTV------NMVAVYQYTQSDVLDGGSGTDTLNLDYTSEWYSYDYWS 715
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
I + + L + ++ + +G++ + ++
Sbjct: 716 YYDGGFDYGIYDAEDTRTTLASGSSLNDIQTALSTAVKTVFDGQNTDVSVSNF-----EI 770
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
N+ GS + D F A S +A V +
Sbjct: 771 LNLKGSQTDNLLIFQMVGSYDGQGGTDTFYADWSGKSVAVNWINTGEAYIYEGVTVSNVE 830
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
+ G + DD+R G+D + + G L
Sbjct: 831 RLLLQTGSGADVIDNTAFSTNDDVRTGAGNDTIS-----VGWGNDYIDGGAGNDVLNPGG 885
Query: 532 SHEDLINAFADAPDLVQA 549
++ + D + A
Sbjct: 886 GNDTVDAGSGDDTVNMVA 903
>gi|238623368|emb|CAS06678.1| alkaline metalloprotease [Pseudomonas sp. W30a]
Length = 284
Score = 139 bits (349), Expect = 2e-30, Method: Composition-based stats.
Identities = 65/272 (23%), Positives = 99/272 (36%), Gaps = 37/272 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP YT ++ A LLRD + F+ ++ N
Sbjct: 13 NGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQ 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ WS V ++TF E + D N + P + Y
Sbjct: 73 QKAQAALAMQSWSDVANVTFTEKATGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTS 132
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 133 WYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGAPTYKDATYGQDTRG 192
Query: 160 TSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S G Y + P++ DI A+QK+YGA G+ Y
Sbjct: 193 YSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNTG 252
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIG 237
+ +++D GG+D LD +
Sbjct: 253 RDFLSATSNADKLVFSVWDGGGNDTLDFSGFT 284
>gi|257485399|ref|ZP_05639440.1| serralysin [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 214
Score = 138 bits (348), Expect = 3e-30, Method: Composition-based stats.
Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 96 SRYFMEINFDKADVW--RYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDND 152
SR + + + + G HEIGH LGL HPG YN G D
Sbjct: 1 SRTDGQSWYLVDNSYKVNTTPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEGNPTYKDAS 60
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAP-KGSLGNNIY 207
Y D+ SVMSY+ ++ + G Y + P++ DI AVQ++YGA G+ +Y
Sbjct: 61 YAEDTRGYSVMSYWSESNTDQNFVKGGVAAYSSAPLLDDIAAVQQLYGANMSTRAGDTVY 120
Query: 208 KIEVQ---------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
S + +++D GG D LD + + I+LN S+S +GG
Sbjct: 121 GFNSTAGRDFYSATSASSKVVFSVWDGGGKDTLDFSGFTQNQK-INLNAASFSDVGGMVG 179
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
N++IA+ V+E+ VG SGND++IGN+A N +
Sbjct: 180 NVSIAKGVVVENAVGGSGNDLLIGNAAANDLKGGA 214
>gi|307320589|ref|ZP_07600003.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
gi|306893739|gb|EFN24511.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
Length = 473
Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats.
Identities = 96/490 (19%), Positives = 152/490 (31%), Gaps = 98/490 (20%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSF----DITELNPNAQEVARWAL-GEWS 63
T + D LL W+ P + ++ F T ++ + A +A+ +
Sbjct: 14 TGNNVVDSLLTGVAWAGTITYSFPTLAKSYAYGFEKYFGFTSVSAAQKNAALFAMEQSFG 73
Query: 64 KVVDLTFEETSIHSDIKFISSNNG---------------YVCTPR---YDSRYFMEINFD 105
+ F ++ F + G Y P + +
Sbjct: 74 PAANDGFS-VEGFTNASFAPGSAGTATIRFAQTALAETSYAYLPALHAAAGDIWFGTAYA 132
Query: 106 KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
G H LHE+GHALGL H + + DS SV+SY
Sbjct: 133 GTADDYRKPVAGNYAWHTHLHELGHALGLKHGHESDVYGAT-----PAQYDSIEYSVLSY 187
Query: 166 FMPQDSMMDASFGY-----CATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEV-------- 211
+ S+ Y T M+ DI A+Q++YGA + GN +YK
Sbjct: 188 RAYVGADTGGSYSYEQFGAPQTFMMGDIAALQEMYGADFTTNSGNTVYKWTPGSGATFVN 247
Query: 212 -----QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI---------GGYE 257
+ TI+D GG D DLT +DL S+ GG
Sbjct: 248 GAVGISPGANRIFATIWDGGGKDTYDLTAYTTALK-VDLRPGKASTFSIDQLAWLDGGPN 306
Query: 258 KNMTIAQ-----------HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++IE+V G S D + GN A NV + +GND +G +G D
Sbjct: 307 GGFAAGNVFNALLYRGDTRSLIENVKGGSAGDAITGNQATNVLWGYAGNDTLNGDTGND- 365
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
Y S ++Y + ++ ++ A
Sbjct: 366 -VLYGGSGSDRLYGGKGNDQIF--------------------------GETGNDLIYAGA 398
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L G D F + + GRD FD DL + + A + +
Sbjct: 399 GADRLNGGSGTDSFVFKALWDSTAAASGRDTIFDFTPKSDRI-DLSAIDANTSIAGDQAF 457
Query: 427 ITHGVKEGRN 436
+ G
Sbjct: 458 LFAGTAAFGG 467
>gi|329848423|ref|ZP_08263451.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843486|gb|EGF93055.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1374
Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats.
Identities = 103/663 (15%), Positives = 174/663 (26%), Gaps = 114/663 (17%)
Query: 3 NIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLS--------FDITELNPNAQEV 54
+ + YT ++ D +L W+ I + + + N Q
Sbjct: 117 DGRYEYTGNQLVDAVLFGSRWTVTNITFSFPATAEFYETPYYEPGHLTNHIPFNAAQQTA 176
Query: 55 ARWALGEWSKVVDLTFEETSIHSDI----------KFISSNNGYVCTPRYDSRYFMEINF 104
AR+A + +TF E + ++ + + P D+
Sbjct: 177 ARYAFSLVAGYTSVTFTEVTESAETHGIIRLSQTDNDTALGSAEGNFPGSDASDGDIWFG 236
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS-------------YNGGYPVYGVDN 151
+ G +HEIGH LGL H G
Sbjct: 237 STNQPFYLTPAIGNWGQATMMHEIGHTLGLKHGQDNYTTLDLTNGGYLDGPGPHYGTAAL 296
Query: 152 DYENDSFLTSVMSYFMPQDSMMDAS---FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIY 207
D + S+M+Y + T M +DI A+Q +YGA +++Y
Sbjct: 297 PANRDGWAWSLMTYRSAPGFTASFQGDRYNQPQTYMQADIAALQFMYGANFTSHATDSVY 356
Query: 208 KIEVQQKD-------------------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ +T++D G D +L + IDL
Sbjct: 357 TFSTTTGEMFINGVGQGTPEINAATGIGKIFRTLWDGDGVDTYNLANFSDNQ-TIDLRPG 415
Query: 249 SWSSIGGYEKNMT-------------IAQ--------HTVIESVVGSSGNDVVIGNSANN 287
+S+ + + IA ++IE+ + GND++IGN A N
Sbjct: 416 QFSTFSQAQLGDSRPLVTGFTAQPGNIANALLYQGDVRSLIENAIAGVGNDILIGNQAAN 475
Query: 288 VFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ GNDV DG +G D + S + A D
Sbjct: 476 ALTGNDGNDVLDGGAGDDVMTGGAGDDTFGVDSSGDVVTEASGHGTDLIAATVSYTLGED 535
Query: 341 VERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
VE L ID + + A L + G D + +
Sbjct: 536 VEHLTLTGTANIDGTGNGLANQITGGAGSNVLNGLDGNDTLTGSYEYRTAAQTIDETTLA 595
Query: 400 DSYLYLGSYDDLRNVFGSDR---GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
+ FG + A A V + + ++ ++ F
Sbjct: 596 SHATIATALALAPLGFGVNSDPDIADATTVPHVTVIGNGGGNTYDMYSFVVEAAGVVGTF 655
Query: 457 ADAPDLVQVGKDHFSNFGC-----------EEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
V + EG ++ + L SY R
Sbjct: 656 DIDLTAVLDSFVELYDASGTRLAYDDDAAVTEGAGGSYAANDSLLSYTFAAAGTYYLRVG 715
Query: 506 AARHYITH----------------GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
T G D L+ + + L + A
Sbjct: 716 RFATATTSAALQAGHSYVLQISLAGNALPPLLDGNDTLDGGSGEDSLSGGLGNDWLDGGA 775
Query: 550 GKD 552
G D
Sbjct: 776 GMD 778
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 58/515 (11%), Positives = 117/515 (22%), Gaps = 48/515 (9%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
++ ++ N +S D AD G T +
Sbjct: 826 TLTGAGDIDATGNAMANLLTGNSGNNQLDGGDGADSLTGAAGNDTYVVGAG--------- 876
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ + V + +D + A + + A
Sbjct: 877 ---DVVTELAGEGTDIVLSAVTWTLSDGVEILTLTGSEDIDGTGNSQANTVTGNGGANHL 933
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNT 247
G +L T+ GDD D+ + +
Sbjct: 934 NGGGGDDALSGGA--GSDSLAGGTGNDTMSGGLGDDTYVVDETGDVVSELSSQGSDTVRA 991
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++ G + I + G+S N+++ GN A NV S+G+D +G++G D+
Sbjct: 992 SVTFTLVGKQVETVILTGVAAINATGNSFNNLLSGNDAANVLNGSAGSDTLNGAAGNDSL 1051
Query: 308 FYYAPSYLYKIYRFENAIIVYDANE----------------HKQDFLSDVERLRFAD-QC 350
A + ++ ++ DA + +E L
Sbjct: 1052 IGGAGADSLMGGLGDDTYVIDDAGDMVIEIGAEGIDLIQTAIGWSLGDQIENLTLTGSGA 1111
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ + ++L ++ L +G D + + D + +
Sbjct: 1112 VGATGNGLGNVLTGNSAANRLDGGLGADTLAGGGGNDTYVIDSASDSVIEGAGAGTDLVE 1171
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
G L ++ L + +Q D+
Sbjct: 1172 TDLSHTLAANVEGLTLTGSAAINGTGNGLNNVLTGNGANNVLTGGAGNDTYYIQNAGDNV 1231
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
G D +Y + G +
Sbjct: 1232 VELGG-----GGTDVIYSAVTYSLNARYAEIINLTGTANINATGNSLSNTLTGNDGIN-- 1284
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
L G D F +I
Sbjct: 1285 ----TLNGKGGTDILTGGLGADIFLFETGAGSDTI 1315
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 70/592 (11%), Positives = 137/592 (23%), Gaps = 46/592 (7%)
Query: 3 NIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
N T + +L + D S D+ +
Sbjct: 471 NQAANALTGNDGNDVLDGGAGDDVMTGGAGDDTFGVDSSGDVV--TEASGHGTDLIAATV 528
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
S + E ++ + NG + + D D T
Sbjct: 529 SYTLGEDVEHLTLTGTANIDGTGNGLANQITGGAGSNVLNGLDGNDTLTGSYEYRTAAQT 588
Query: 123 NALHEIGHA-------------LGLMHPGSYNGGYPVYGVDNDYENDSF-LTSVMSYFMP 168
+ E A LG + + T M F+
Sbjct: 589 --IDETTLASHATIATALALAPLGFGVNSDPDIADATTVPHVTVIGNGGGNTYDMYSFVV 646
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK-------------IEVQQKD 215
+ + + +F T ++ V + G + +
Sbjct: 647 EAAGVVGTFDIDLTAVLDSFVELYDASGTRLAYDDDAAVTEGAGGSYAANDSLLSYTFAA 706
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ L G + ++ + + N T+ + +S+ G
Sbjct: 707 AGTYYLRVGRFATATTSAALQAGHSYVLQISLAGNALPPLLDGNDTLDGGSGEDSLSGGL 766
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + G + + +GND + S D A + + + EH
Sbjct: 767 GNDWLDGGAGMDALDGGTGNDTYVVDSADDVVSEGAGAGTDTVISAVTWSLAGREIEHLT 826
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH-FYEFGLSEG 394
+ + L+ + L G D + EG
Sbjct: 827 LTGAGDIDATGNAMANLLTGNSGNNQLDGGDGADSLTGAAGNDTYVVGAGDVVTELAGEG 886
Query: 395 RDITFDS-YLYLGSYDDLRNVFGSDRGAAARHYITH------GVKEGRNPDAFKALEYIA 447
DI + L ++ + GS+ + + G AL A
Sbjct: 887 TDIVLSAVTWTLSDGVEILTLTGSEDIDGTGNSQANTVTGNGGANHLNGGGGDDALSGGA 946
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGC----EEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ L + +G D + E D+ ++ + +
Sbjct: 947 GSDSLAGGTGNDTMSGGLGDDTYVVDETGDVVSELSSQGSDTVRASVTFTLVGKQVETVI 1006
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYI---ASHEDLINAFADAPDLVQAGKD 552
G A + A + L A + + AG D
Sbjct: 1007 LTGVAAINATGNSFNNLLSGNDAANVLNGSAGSDTLNGAAGNDSLIGGAGAD 1058
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 45/384 (11%), Positives = 91/384 (23%), Gaps = 52/384 (13%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISS 84
+ T R S T + + V + + + +F +D + +
Sbjct: 976 DVVSELSSQGSDTVRASVTFTLVGKQVETVILTGVAAINATGN-SFNNLLSGNDAANVLN 1034
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI-----------LSHNALHEIGHALG 133
+ T + I AD G+G T + + I A+G
Sbjct: 1035 GSAGSDTLNGAAGNDSLIGGAGADSLMGGLGDDTYVIDDAGDMVIEIGAEGIDLIQTAIG 1094
Query: 134 LMHPG----------------SYNGGYPVYGVDNDYEND-------------SFLTSVMS 164
G + G D + + S
Sbjct: 1095 WSLGDQIENLTLTGSGAVGATGNGLGNVLTGNSAANRLDGGLGADTLAGGGGNDTYVIDS 1154
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
A T + + A V+ + ++ + + +
Sbjct: 1155 ASDSVIEGAGAGTDLVETDLSHTLAANVEGLTLTGSAAINGTGNGLNNVLTGNGANNVLT 1214
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY--------EKNMTIAQHTVIESVVGSS 275
G+D + N ++L I + T + G+S
Sbjct: 1215 GGAGNDTYYIQN--AGDNVVELGGGGTDVIYSAVTYSLNARYAEIINLTGTANINATGNS 1272
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
++ + GN N G D+ G G D F + + I F
Sbjct: 1273 LSNTLTGNDGINTLNGKGGTDILTGGLGADIFLFETGAGSDTIADFSAFQNDSINVNAYT 1332
Query: 336 DFLSDVERLRFADQCIDSVNVKQR 359
+++ + A +
Sbjct: 1333 GGIANNGLVTQAGGNVLITLGGSN 1356
>gi|238623414|emb|CAS06701.1| alkaline metalloprotease [Pseudomonas fluorescens bv. G]
Length = 215
Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 75/203 (36%), Gaps = 16/203 (7%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
+ F+ ++ + + A A+ W+ V ++ F E + D
Sbjct: 8 LTYTFLTSASSSTMYKHGISGFSQFSAQQKAQAVLAMQSWADVANVVFTEKASGGDAHMT 67
Query: 83 SSNN--------GYVCTPRYDSRYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHAL 132
N + P + Y + + + HEIGH L
Sbjct: 68 FGNYSGGQDGAAAFAYLPGTGAGYDGTSWYLINSSYTQNKNPDLNNYGRQTLTHEIGHTL 127
Query: 133 GLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSD 187
GL HPG YN G D Y D+ SVMSY+ ++ + S G Y + P++ D
Sbjct: 128 GLAHPGDYNAGEGNPSYKDASYGQDTRGYSVMSYWSESNTSQNFSKGGVEAYSSGPLMDD 187
Query: 188 IVAVQKIYGAP-KGSLGNNIYKI 209
I A+QK+YGA G+ Y +
Sbjct: 188 IAAIQKLYGANYSTRAGDTTYGL 210
>gi|254474734|ref|ZP_05088120.1| secreted protease B [Ruegeria sp. R11]
gi|214028977|gb|EEB69812.1| secreted protease B [Ruegeria sp. R11]
Length = 438
Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats.
Identities = 78/416 (18%), Positives = 129/416 (31%), Gaps = 75/416 (18%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSD-------IKF 81
+P L T+ +D +E R A +++ F E + SD +
Sbjct: 39 TTEPADLPTNTTFYDWQTFTAAERENFREAFAHIETFLNVDFVEVNGQSDPDLNLGLVSI 98
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
S G + A LHEIGHA+GL H N
Sbjct: 99 PGSTVGIGGYSIGYRGTTITRWDGFAVFDNQQDMSRDDRESLILHEIGHAMGLQHSFEAN 158
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
E ++ L +VMSY + +D M+ D++A+Q I+GA + +
Sbjct: 159 P-------ALPAEFENNLYTVMSYSPNPINGLD-----SDAMMLFDVIALQDIWGAAQYN 206
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN Y + I+D+GG D D + +DL ++SS ++
Sbjct: 207 SGNTTYSGART----DTVDLIWDTGGVDTFDASDRSSGV-RLDLRQMAFSSFDADS-DVV 260
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I IE+ +G G D + GN +NN G D G +G
Sbjct: 261 IGHGVTIENAIGGLGRDRLTGNGSNNQLTGGRGRDTLLGQTGN----------------- 303
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
V IL+ + + L G D
Sbjct: 304 -----------------------------DSLVGNGGVDILKGGSGRDTLRGGYGNDRLL 334
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
GRD + D ++ + G+D + +++ ++
Sbjct: 335 GNSGNDLLLGGPGRDTLNGQFG----NDQMQGMGGADTFQFFGNTGNDTIRDFQDD 386
>gi|254470269|ref|ZP_05083673.1| hypothetical protein PJE062_4814 [Pseudovibrio sp. JE062]
gi|211960580|gb|EEA95776.1| hypothetical protein PJE062_4814 [Pseudovibrio sp. JE062]
Length = 1364
Score = 137 bits (344), Expect = 6e-30, Method: Composition-based stats.
Identities = 114/565 (20%), Positives = 178/565 (31%), Gaps = 68/565 (12%)
Query: 51 AQEVARWALGEWSKVVDLTFEETSIH-SDIKFISSNNGYVCTPRYDSRYFMEINFDKADV 109
A E R A+ + V + ET+ ++ F + G + +
Sbjct: 5 AAERVREAMDYVASVTGIEIVETTDQVAEFNFKDNGKGAGAGHGGYAYQRDLDAWYSDYT 64
Query: 110 WRYGIGKGTILSH---------NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
H LHEIGHALGL H G YNG P Y + NDS
Sbjct: 65 VINLPAGNGHGRHDSDTGHFVHTVLHEIGHALGLGHQGPYNGARPNYPNGVRFLNDSRHV 124
Query: 161 SVMSY-FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS----------LGNNIYKI 209
SVMSY ++ AS Y T +D++A+ KIYG + LG+ +Y
Sbjct: 125 SVMSYLAQEKNYTSGASNAYPQTFAAADLLALDKIYGDQSYNGKTFGTHNAFLGDTVYGF 184
Query: 210 EVQQK-------------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-----SWS 251
T+ D GG+D LDL+ + + S
Sbjct: 185 NTNISDENNFRMVNLAKYGDNNSYTLVDGGGNDTLDLSGFRKATIDLRVTQADDTMPYSS 244
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G KN++IA TVIE+ VG+ GND + GN A+N + GN+ G G D F+ A
Sbjct: 245 SVDGERKNISIAVGTVIENAVGTRGNDKITGNHADNHLWGGRGNNKMYGLEGDDHFYLEA 304
Query: 312 PSYLYKIYRFENAIIVYDA-------------NEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ + + + + + +D + +E + + +
Sbjct: 305 GNDVMDGGEGSDWLHIDTDRDMTIDLNKEELVSSFGRDKIISIENVDSGSGDDRIIGNEA 364
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ LE + L G D + E G D L + DD +
Sbjct: 365 ANELEGNDGDDTLYGNGGNDYLKGGNGNDELHGGAGND-----RFDLDAGDDQIHGGEGT 419
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
V N S + I+A L +D+ +
Sbjct: 420 DTIYFYGRQDARVDLTENTIETAYGNDTISGIESISAGHGNDYLRGNAEDNSIRGNGGDD 479
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
+ YL S Y G +E ++ +I
Sbjct: 480 IILGEAGDDYL-----------SGSHGNDELYGGTGNDTLNEGSGDDLVEAGEGNDRIIL 528
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGR 563
+ AG D + + R
Sbjct: 529 GDGNDILDGGAGNDRITINSKKGAR 553
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 62/373 (16%), Positives = 105/373 (28%), Gaps = 19/373 (5%)
Query: 192 QKIYGAPKGS--LGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYID 244
YG L N + I++I G+D L D ++ G + I
Sbjct: 422 IYFYGRQDARVDLTENTIETAYGNDTISGIESISAGHGNDYLRGNAEDNSIRGNGGDDII 481
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L + G N + T +++ SG+D+V N+ GND+ DG +G
Sbjct: 482 LGEAGDDYLSGSHGNDELYGGTGNDTLNEGSGDDLVEAGEGNDRIILGDGNDILDGGAGN 541
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D + R + A+ + D +++VE + + L
Sbjct: 542 DRITINSKKGA----RIDLAVTDAQDTGYGMDKITNVENITGNKHDDVFAGTDGSNSLRG 597
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDR 419
+ + G D E + G DI F D D L G D
Sbjct: 598 MGGDDVIDGRGGDDKLEGNDGNDKINGGAGDDIIFGGSGDDELTGGDGKDLLYGGSGDDV 657
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ G + E + + + G + F G ++ R
Sbjct: 658 FIIGQGKDLLDGGAGHDIVRASNDEALVVDLKHTRLVTASGVKILRGIEGFEAGGGDD-R 716
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
+ + L + G G + L A + L A
Sbjct: 717 LIGTEGDNTLIGNAGNDVLSGLGGNDLLD--GGEGDDKLYGGAGDDTLVGGAGDDILEAA 774
Query: 540 FADAPDLVQAGKD 552
+ AG D
Sbjct: 775 EGNNVLHGDAGND 787
Score = 83.7 bits (205), Expect = 8e-14, Method: Composition-based stats.
Identities = 68/483 (14%), Positives = 129/483 (26%), Gaps = 31/483 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D G D D G G I + E+ G
Sbjct: 588 GTDGSNSLRGMGGDDVIDGRGGDDKLEGNDGNDKINGGAGDDIIFGGSGDDELTGGDG-- 645
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ +D F+ + + D +V D+ + +
Sbjct: 646 ----------KDLLYGGSGDDVFIIGQGKDLLDGGAGHDIVRASNDEALVVDLKHTRLV- 694
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ G I + + + + GD+ L G N + + G
Sbjct: 695 ----TASGVKILRGIEGFEAGGGDDRLIGTEGDNTLI----GNAGNDVLSGLGGNDLLDG 746
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + + +++VG +G+D++ NNV +GND+ G D + +
Sbjct: 747 GEGDDKLYGGAGDDTLVGGAGDDILEAAEGNNVLHGDAGNDLLTTGDGDD--ELHGGAGE 804
Query: 316 YKIYRFENAIIVY-DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
K+ ++ D + + + L L + L
Sbjct: 805 DKLTSGAGNDRLFGDNGSDELRAGAGDDELHGGAGEDQLYGEDGNDTLHGGDGDDILRGE 864
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF--DSYLYLGSY---DDLRNVFGSDRGAAARHYITH 429
G D +EG + F D YL + D L G+D +R T
Sbjct: 865 AGDDELHGDAGNDNLIDTEGNNALFGGDGDDYLEAGDGKDILDGGAGNDTILLSRGRDTI 924
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+G + E ++ + +A + R D+ +
Sbjct: 925 RGGDGVDHLIADYEENLSINLSYTSARNTGIGQASITGIENVTTSSGRDRVTGNDADNII 984
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
++ + G + + D LE A ++ L D
Sbjct: 985 KTHAGEDTLNGGAGNDSL--WGGDDRDLLNGGDGNDLLEGEADNDTLNGGAGDDVVNAGD 1042
Query: 550 GKD 552
G D
Sbjct: 1043 GND 1045
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 64/482 (13%), Positives = 116/482 (24%), Gaps = 37/482 (7%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
++ N + + D G G T++ + A G
Sbjct: 719 GTEGDNTLIGNAGNDVLSGLGGNDLLDGGEGDDKLYGGAGDDTLVGGAGDDILEAAEGNN 778
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G +++ D + + T + +
Sbjct: 779 VLHGDAGND-----------------LLTTGDGDDELHGGAGEDKLTSGAGNDR-LFGDN 820
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ + G + + +Y G+D L GG + I + G
Sbjct: 821 GSDELRAG----AGDDELHGGAGEDQLYGEDGNDTL----HGGDGDDILRGEAGDDELHG 872
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N + ++ G G+D + ++ +GND S G DT
Sbjct: 873 DAGNDNLIDTEGNNALFGGDGDDYLEAGDGKDILDGGAGNDTILLSRGRDTIRGGDGVDH 932
Query: 316 YKIYRFEN-----AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
EN + Q ++ +E + + +I++ A +
Sbjct: 933 LIADYEENLSINLSYTSARNTGIGQASITGIENVTTSSGRDRVTGNDADNIIKTHAGEDT 992
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L G D +G D+ D L G D A
Sbjct: 993 LNGGAGNDSLWGGDDRDLLNGGDGNDLL----EGEADNDTLNGGAGDDVVNAGDGNDKIT 1048
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+ EG + E A D + + D +L
Sbjct: 1049 LDEGNDIIRGGEGEDRLIVSGSKAARIDLNASGAQQTGYGLDVISGIENISGGDGDDHLT 1108
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
D G + +G D L +++LI D G
Sbjct: 1109 GNDLRNEFHGGNGDDVLIGAGGDDYLQG--GDGNDTLLGGLGNDNLIGGAGDDTVNGDDG 1166
Query: 551 KD 552
D
Sbjct: 1167 SD 1168
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 96/313 (30%), Gaps = 15/313 (4%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+T E S + + N + + D G + + +
Sbjct: 958 ASITGIENVTTSSGRDRVTGNDADNIIKTHAGEDTLNGGAGNDSLWGGDDRDLLNGGDGN 1017
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+ G + NGG V+ ND + + D +
Sbjct: 1018 DLLE---GEADNDTLNGGAGDDVVNAGDGNDKITLDEGNDIIRGGEGEDRLIVSGSKAAR 1074
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
D+ A GA + G ++ + + + GG + + +
Sbjct: 1075 IDLNA----SGAQQTGYGLDVISGIENISGGDGDDHLTGNDLRNEF----HGGNGDDVLI 1126
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G + N T+ ++++G +G+D V G+ +++ SG D+ DG G D
Sbjct: 1127 GAGGDDYLQGGDGNDTLLGGLGNDNLIGGAGDDTVNGDDGSDLITLGSGTDIIDGGDGRD 1186
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T Y L + + Q +S+VE + + + + L
Sbjct: 1187 TLRYDGSESLTV----NLSRTDFQNTGIGQLKVSNVEVVEGGSGDDVLIGDEVANTLRGG 1242
Query: 366 ASYEDLIQVIGQD 378
+ + L G+D
Sbjct: 1243 SGADTLQGGGGRD 1255
>gi|115373620|ref|ZP_01460915.1| interstitial collagenase (Matrixmetalloproteinase-1) (MMP-1)
(Fibroblast collagenase) [Stigmatella aurantiaca
DW4/3-1]
gi|310824941|ref|YP_003957299.1| peptidase [Stigmatella aurantiaca DW4/3-1]
gi|115369323|gb|EAU68263.1| interstitial collagenase (Matrixmetalloproteinase-1) (MMP-1)
(Fibroblast collagenase) [Stigmatella aurantiaca
DW4/3-1]
gi|309398013|gb|ADO75472.1| Peptidase [Stigmatella aurantiaca DW4/3-1]
Length = 477
Score = 137 bits (344), Expect = 7e-30, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 102/260 (39%), Gaps = 26/260 (10%)
Query: 360 SILEYTASYEDLIQVIGQ----DVFESMKHFYEFGLSEGRDITFDSYLYLGSYD--DLRN 413
S L + D D+ + H L G + +Y DL+
Sbjct: 232 SSLSGDVHFNDAYGWTVNGTQYDLRSTALHELGHSLGLGHSPDSGAVMYAYYNGKIDLQP 291
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ + R+ F A Y++ H DL AF H+ +
Sbjct: 292 DDLNGIRTLYGTF--------RDSRTFDASFYLSLHSDLSAAFGGDQ---GAASRHWIDA 340
Query: 474 GCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYI 530
G EGR TFD YL Y DL+ FG++ A H++ G+ EGR AF A Y+
Sbjct: 341 GRNEGRMGAPTFDVRDYLARYPDLQAAFGNNYPVAISHWMQSGINEGRQGSVAFSAPYYL 400
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFG-SDR 587
A + DL NAF + +A +HF G EGR S F+P YL + D+ V+G ++
Sbjct: 401 AIYPDLRNAFGNN---YRAAMEHFLTAGLHEGRRGSPEFDPAYYLAANPDVAAVYGANNF 457
Query: 588 SAAAQHYITHGMKEGRALGI 607
H++ G EGR
Sbjct: 458 RGGLIHWLQAGRAEGRRGAP 477
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFG 416
Y + + DL G D + +H+ + G +EGR TFD YL Y DL+ FG
Sbjct: 310 FDASFYLSLHSDLSAAFGGDQGAASRHWIDAGRNEGRMGAPTFDVRDYLARYPDLQAAFG 369
Query: 417 SDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
++ A H++ G+ EGR AF A Y+A + DL NAF + + +HF G
Sbjct: 370 NNYPVAISHWMQSGINEGRQGSVAFSAPYYLAIYPDLRNAFGNN---YRAAMEHFLTAGL 426
Query: 476 EEGR--FVTFDSYLYLGSYDDLRNVFGS-DRGAAARHYITHGVKEGRNPDA 523
EGR FD YL + D+ V+G+ + H++ G EGR
Sbjct: 427 HEGRRGSPEFDPAYYLAANPDVAAVYGANNFRGGLIHWLQAGRAEGRRGAP 477
Score = 86.4 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 5/180 (2%)
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G+ T + F ++ + D + A + + +
Sbjct: 296 GIRTLYGTFRDSRTFDASFYLSLHSDLSAAFGGDQGAASRHWIDAGRNEGRMGAPTFDVR 355
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRG 420
+Y A Y DL G + ++ H+ + G++EGR + F + YL Y DLRN FG++
Sbjct: 356 DYLARYPDLQAAFGNNYPVAISHWMQSGINEGRQGSVAFSAPYYLAIYPDLRNAFGNNYR 415
Query: 421 AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
AA H++T G+ EGR F Y+A++ D+ + + + G H+ G EGR
Sbjct: 416 AAMEHFLTAGLHEGRRGSPEFDPAYYLAANPDVAAVYG--ANNFRGGLIHWLQAGRAEGR 473
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 54/170 (31%), Gaps = 28/170 (16%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH----- 76
W + + T + +++ AL W + F E
Sbjct: 146 SWPQTNLTFAFLNSTPDLDA-------GSSRAAVIGALLRWQAAAPVAFTEVGSGNVDLF 198
Query: 77 --------SDIK-FISSNNGYVCTPRYDSRYF-----MEINFDKADVWRYGIGKGTILSH 122
D F ++ + P + Y +++F+ A W G L
Sbjct: 199 VSWQYGDHGDGYPFDANVLAHAFYPACSAPYACSSLSGDVHFNDAYGWTVN-GTQYDLRS 257
Query: 123 NALHEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
ALHE+GH+LGL H P S Y Y D + D Y +DS
Sbjct: 258 TALHELGHSLGLGHSPDSGAVMYAYYNGKIDLQPDDLNGIRTLYGTFRDS 307
>gi|194335832|ref|YP_002017626.1| Cadherin [Pelodictyon phaeoclathratiforme BU-1]
gi|194308309|gb|ACF43009.1| Cadherin [Pelodictyon phaeoclathratiforme BU-1]
Length = 1134
Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats.
Identities = 86/223 (38%), Positives = 115/223 (51%), Gaps = 20/223 (8%)
Query: 401 SYLYLGSYDDLRN------VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
S+ YL S+ DL V +D A RHYI HG+ EGR F A EY+AS+ DL+N
Sbjct: 8 SWEYLASHTDLMTWLRADGVTDADSATATRHYIEHGISEGRTIT-FNAWEYLASNPDLMN 66
Query: 455 ---AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN------VFGSDRGA 505
A HF +G E R +TF+++ YL S DL N V +D
Sbjct: 67 WLRADGVTDADAITAAKHFIGYGYNEERTITFNAWEYLASNPDLMNWLRADGVTDADAIT 126
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL---VQAGKDHFSNFGYEEG 562
AA+H+I +G E R F EY+AS+ DL+N HF +GY EG
Sbjct: 127 AAKHFIGYGYDEERTIT-FDVWEYLASNPDLMNWLGADGITDADAITAAKHFIAYGYNEG 185
Query: 563 RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
R++ F+ YL SY+DL N FG+D AA HY+T+G +EGRA+
Sbjct: 186 RTMIFDAAAYLASYEDLRNAFGNDTLAATIHYVTYGYREGRAV 228
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 359 RSILEYTASYEDLIQVIGQD------VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
+ EY AS DL+ +G D + KHF +G +EGR + FD+ YL SY+DLR
Sbjct: 144 FDVWEYLASNPDLMNWLGADGITDADAITAAKHFIAYGYNEGRTMIFDAAAYLASYEDLR 203
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
N FG+D AA HY+T+G +EGR + +
Sbjct: 204 NAFGNDTLAATIHYVTYGYREGRAVNNYHP 233
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 7/118 (5%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL- 315
+ + + + G +GND ++G + N++ +G D DG +G DTF
Sbjct: 535 NTGLLLEGDSNDNRLTGGTGNDTLVGGNGNDILRGGAGTDSMDGGAGDDTFVIVGDLSGG 594
Query: 316 ------YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + + + +D VE + + + Y S
Sbjct: 595 GKVGSPEDTVALGHPLSDLNGQDLNEDNNGAVETIVGGEGNDTLYVYGTADLSHYVIS 652
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + GV + + + + S + +H IE+V G++ +D + GNS +N
Sbjct: 1046 DFVVQLGVGDVVGMASNSSDILSAINSAFVNYKHDFIENVKGTAYDDTLTGNSLDNHIDG 1105
Query: 292 SSGNDVFDGSSGLDTF 307
+G+D+ G G DT
Sbjct: 1106 GAGDDILKGLVGNDTI 1121
Score = 38.6 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ Y ASYEDL G D + H+ +G EGR +
Sbjct: 183 NEGRTMIFDAAAYLASYEDLRNAFGNDTLAATIHYVTYGYREGRAVN 229
>gi|124023792|ref|YP_001018099.1| hypothetical protein P9303_20991 [Prochlorococcus marinus str. MIT
9303]
gi|123964078|gb|ABM78834.1| Hypothetical protein P9303_20991 [Prochlorococcus marinus str. MIT
9303]
Length = 486
Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats.
Identities = 101/442 (22%), Positives = 158/442 (35%), Gaps = 62/442 (14%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSF--DITELNPNAQEVARWALGEWSKVVDLTFEETSI-H 76
D + N IR+ +L+ D L + +AR A + + + + F ET+
Sbjct: 50 DHFHKNGRIRFNVSGWNNEQLAIPPDSDGLIDEYRNLAREAFKLFEENLGIDFVETNEED 109
Query: 77 SDIKFISS---NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG------TILSHNALHE 127
+DI FI + + TP + + E + + + L +HE
Sbjct: 110 ADIFFIDNHRDGGYWSYTPLEERSLYSEKAYPEHSFINITVDDSLSAKLHGGLFATFIHE 169
Query: 128 IGHALGLMHPGSYNGGYPV-----YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY--- 179
IGH+LGL H G+YN Y Y N S +S+MSYF S+G
Sbjct: 170 IGHSLGLGHDGNYNFDDSNPKASNYENAGPYLNSSQQSSMMSYFRVPSKDALRSWGVEMI 229
Query: 180 -----------CATPMVSDIVAV-----QKIYGAPKGSLGNNIYKIEVQQKD-------- 215
TPM D +A+ Q+ YG G+ +Y +
Sbjct: 230 NPNIANAHFEHTNTPMPIDWLALDNIYKQQGYGISNSFNGDTLYGADTSIPAEVSNVWNQ 289
Query: 216 -----SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-------SWSSIGGYEKNMTIA 263
TI D G D++D++ G IDL S + G + N+ IA
Sbjct: 290 FADFIHHNAFTIVDGSGHDIIDVS-FSGFDQTIDLRATDPNSDFLYPSDVNGLKGNLYIA 348
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFE 322
+T IE + SGND++IGN NN+ SG+D G G +T K Y
Sbjct: 349 ANTEIEEAITGSGNDLLIGNKFNNILDGGSGSDELWGFKGANTLKAGDFDDVTDKFYIKA 408
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ ++ + D + + D D Q I + S + + V E+
Sbjct: 409 SNMVEQCDFLFQVDSSDRI----YIDTSDDGQITYQDHIEDPNGSNYVGVGIFVDAVLEA 464
Query: 383 MKHFYEFGLSEGRDITFDSYLY 404
+ + DIT Y
Sbjct: 465 LVINSGLTSDQVNDITKGGDFY 486
>gi|163794636|ref|ZP_02188606.1| putative secreted calcium-binding protein [alpha proteobacterium
BAL199]
gi|159179909|gb|EDP64434.1| putative secreted calcium-binding protein [alpha proteobacterium
BAL199]
Length = 485
Score = 136 bits (341), Expect = 2e-29, Method: Composition-based stats.
Identities = 80/418 (19%), Positives = 133/418 (31%), Gaps = 46/418 (11%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q + + + S + E N + AR AL EWS ++TF E S
Sbjct: 63 LMGQSVTVTYSFMTSNPSYNSTAS-NFQEFNDTMKSAARLALAEWSSAANITFVEVSDAG 121
Query: 78 DI-------KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
D + +S GY P + +I + + G +HEIGH
Sbjct: 122 DGGTLRFGSEAMSDYAGYAYYPSTSA-IGGDIWISNSFSYNTAPVVGNYGYLTYMHEIGH 180
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
A+GL HPG+Y + D+ +VMSY S Y + DI+A
Sbjct: 181 AIGLKHPGNYGSSTGPF---LSSSADNTDNTVMSYT-------TGSAVYPTSLGSYDILA 230
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ +YG N+ G D + Y+ +
Sbjct: 231 ARYLYGYSGTGTIGNVTF------------------GSDAAETFTGDSGIQYVHGRDGA- 271
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
I N +A + ++V+G G+D++ GN +++ SGND G
Sbjct: 272 DYIAVLGGNDGVAAGSGSDTVLGGDGSDLIYGNIGSDLLSGGSGNDTIFGGQND----GP 327
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR--SILEYTASY 368
S + ++ + I D + + + + +
Sbjct: 328 ESSGSDGVLKYRSGIETVDGGSGNDVLYGNYGNDLILGGTGNDLIYAGQDEDTASGGSGN 387
Query: 369 EDLIQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ + G D+ F FG G D D + NV GS + +
Sbjct: 388 DTIYGNKGHDLLIGGDGFDRFMFGSDSGNDTISDFTYFTDYLVIQSNVNGSGITSFSD 445
>gi|238623412|emb|CAS06700.1| alkaline metalloprotease [Pseudomonas chlororaphis subsp.
chlororaphis]
Length = 286
Score = 136 bits (341), Expect = 2e-29, Method: Composition-based stats.
Identities = 62/274 (22%), Positives = 98/274 (35%), Gaps = 37/274 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ A LLRD + F+ ++ N
Sbjct: 13 NGKPSYSVDQAATQLLRDGAAYQDLNGNGKIELTYTFLTSASSSTMYKHGISGFSQFNAQ 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E + D N + P + Y
Sbjct: 73 QKAQAALAMQSWADVANVTFTEKASGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 132
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFL 159
+ + + HEIGH LGL HPG YN G D Y D+
Sbjct: 133 WYLINSSYTQNKAPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGEDTRG 192
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ- 213
S+MSY+ ++ + S Y + P++ DI A+QK+YGA G+ Y
Sbjct: 193 YSIMSYWSESNTDQNFSKAGVEAYSSGPLMDDIAAIQKLYGANTTTRTGDTTYGFNSNTG 252
Query: 214 --------KDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ +++D+GG D LD +
Sbjct: 253 RDFLSASSSADKLVFSVWDAGGKDTLDFSGFTQN 286
>gi|84686280|ref|ZP_01014175.1| protease PrtA [Maritimibacter alkaliphilus HTCC2654]
gi|84665807|gb|EAQ12282.1| protease PrtA [Rhodobacterales bacterium HTCC2654]
Length = 415
Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats.
Identities = 66/320 (20%), Positives = 114/320 (35%), Gaps = 26/320 (8%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS--- 77
+++ + + + R AL +++ F E S +
Sbjct: 37 FAFNDAASTFSFLNASGAVAFSGFEAWQLSEILAVRRALAHIETFLNVDFVEVSATTNPD 96
Query: 78 -DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG--TILSHNALHEIGHALGL 134
D+ F ++G + + + T LHEIGHALGL
Sbjct: 97 MDLAFAELDDGTAGYGGWKADTSGSQITAVDSFAVFDRDFDIVTDRYGVVLHEIGHALGL 156
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H + D+ S+M+Y S V D++A+Q I
Sbjct: 157 RHTFDSDL--------LPDRFDTNKWSLMAYDRHP-----GSGVASDAMGVFDVLALQDI 203
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+GA + + + Y TI+D+GG D D T +DL ++S G
Sbjct: 204 WGAARYADDDTTYVGSRTATT----DTIWDTGGIDTFDATGTPHRVK-LDLREGAFSRFG 258
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+++ +A TVIE+ G +GND + GN A+N + G+D+ +G G D A
Sbjct: 259 PAYEDVVVAFGTVIENSRGGAGNDRLAGNPASNRIEGNQGDDMLNGKQGDDILL--AGDR 316
Query: 315 LYKIYRFENAIIVYDANEHK 334
++ + A +
Sbjct: 317 DDRLRGGKGADWINGGPGDD 336
>gi|307152358|ref|YP_003887742.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
gi|306982586|gb|ADN14467.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
Length = 880
Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats.
Identities = 81/376 (21%), Positives = 132/376 (35%), Gaps = 69/376 (18%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSF-----DITELNPNAQEVARWALGEWSKVVDLTFEET 73
W + + Y + S+ + E++ + R L V+D+ F E
Sbjct: 118 WGFSWGSRQLTYSFYNDSVFGGSYYGTETGVKEVSEGIKTNVRSILNWLENVIDIDFVEV 177
Query: 74 SIHSD----IKFISSN---NGYVCTPRYD------SRYFMEINFDK-ADVWRYGIGKGTI 119
+ + ++F+ SN Y P D + N+D+ D + G
Sbjct: 178 AESQNNYGRMRFMLSNDPTYAYAYYPSSDVMDSEAGDVHLNPNYDRLGDTNGFQNLAGKH 237
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
+HEIGHALGL HP + P + D+ +VM+Y +
Sbjct: 238 GYMALVHEIGHALGLKHPFDDSPNLPP-------QEDNTTNTVMTYN--------FTGNS 282
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ------------QKDSPFIQTIYDSGG 227
T M DI A+Q +YGA + + IYK + Q I+DSGG
Sbjct: 283 AGTYMGFDIKALQYMYGAKAYNTTDTIYKFTTKVDQFSVGGQLSLNTSYSTKQLIWDSGG 342
Query: 228 DDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT----------------IAQHTVIE 269
D LD + DLN + + IA + +IE
Sbjct: 343 KDTLDFFSLAANSTGYRFDLNPGGILTTQSAYNGTSYTVNGTTYKTTTFGTEIAYNVLIE 402
Query: 270 SVVGSSGNDVVIGNSANNVFFESS-----GNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ SS ND V NSA N F S GNDV+ ++ D + + +
Sbjct: 403 NLINSSSNDEVFANSAANTFAGYSSTRKTGNDVYWNTTSADILDLSSYNLGAVTQTQSSN 462
Query: 325 IIVYDANEHKQDFLSD 340
+V + + + +
Sbjct: 463 DLVLGLGTNGKITVKN 478
>gi|238623364|emb|CAS06676.1| alkaline metalloprotease [Pseudomonas sp. W2a]
Length = 229
Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats.
Identities = 51/229 (22%), Positives = 81/229 (35%), Gaps = 25/229 (10%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFIS 83
+ F+ ++ N + A A+ W+ V +TF E + D
Sbjct: 1 TYTFLTSASSSTMNKHGIAGFSQFNAQQKAQAVLAMQSWADVAKVTFTEKASGGDGHMTF 60
Query: 84 SNN--------GYVCTPRYDSRYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALG 133
N + P + Y + + + HEIGH LG
Sbjct: 61 GNYSSGQDGAAAFAYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLG 120
Query: 134 LMHPGSYNGGY-PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDI 188
L HPG YN G D Y D+ S+MSY+ ++ + S G Y + P++ DI
Sbjct: 121 LAHPGDYNAGNGNPTYNDATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDI 180
Query: 189 VAVQKIYGAP-KGSLGNNIYKIEVQQ---------KDSPFIQTIYDSGG 227
A+QK+YGA G+ Y + +++D GG
Sbjct: 181 AAIQKLYGANYNTRAGDTTYGFNSNTGRDFLSATSNADKLVFSVWDGGG 229
>gi|163740056|ref|ZP_02147460.1| possible protease [Phaeobacter gallaeciensis BS107]
gi|161386687|gb|EDQ11052.1| possible protease [Phaeobacter gallaeciensis BS107]
Length = 483
Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats.
Identities = 102/489 (20%), Positives = 157/489 (32%), Gaps = 109/489 (22%)
Query: 25 NYFIRYKPD--VLTTHRLSFDITE----------LNPNAQEVARWALGEWSKVVDLTFEE 72
+F+ PD +D+ ++P +++ A+ W++V +L
Sbjct: 27 YHFLTSVPDYYDYDPDFGDYDVGGEYLPEGATVNMDPAERQMMLQAVAAWNEVANLNLIP 86
Query: 73 T-SIHSDIKFISSNNGYVCT----------------PRYDSRYFMEINFDKADVWRYGIG 115
+D+ F S++ P ++ + V G
Sbjct: 87 ARGGTADLTFASAHFANAGLFGFIVDFPDPSDLGTRPSPAGDLWLNNSNPDQYVPGIGPI 146
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
G + LHE+GHALGL HP G +VMSY
Sbjct: 147 LGHTSWNTYLHELGHALGLHHPNEMPENPTTPG----------QFTVMSYLPHPGDADLG 196
Query: 176 SF--GYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQ------------ 220
G+ TPM+ D+ AVQ +YGA +Y + Q
Sbjct: 197 QDLQGWALTPMLWDMQAVQALYGANTETRTDATVYLGAGDGRGGQAYQYGADGMTVRGGD 256
Query: 221 --------TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT------ 266
TI+D+GG DL+D + I + IDL +SSIG E N+ +A
Sbjct: 257 GVARNVSLTIWDAGGQDLIDASDI-ETNSRIDLRPGQYSSIGTLENNVAMAAAVRLDGRT 315
Query: 267 --VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+IE G +G+D +IGN A N ++G D G+ G D
Sbjct: 316 LNLIEDAWGGAGHDHLIGNGAANELLGNAGRDTLAGARGGDEL-------------SGGQ 362
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L + R L+ A + L G D +
Sbjct: 363 GSDRLQGGKGHDALEG---------------GRGRDTLKGGAGQDRLDGGDGNDRMAGGR 407
Query: 385 HFYEFGLSEGRDITFD----------SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
F S+G D+ D + + + DLR+ RGA +G
Sbjct: 408 GADVFVFSQGADVVIDFQRDDRIDMRATTGVSDFADLRDDHLEVRGADLVIRDDNGWSLT 467
Query: 435 RNPDAFKAL 443
AF L
Sbjct: 468 LQDTAFDVL 476
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 53/172 (30%), Gaps = 11/172 (6%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ I+ + G D L G + G + + +
Sbjct: 312 DGRTLNLIEDAWGGAGHDHLIGNGAANELLGNAGRDTLAGARGGDELSGGQGSDRLQGGK 371
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++ G G D + G + + GND G G D F + + + ++ ++ I
Sbjct: 372 GHDALEGGRGRDTLKGGAGQDRLDGGDGNDRMAGGRGADVFVFSQGADVVIDFQRDDRID 431
Query: 327 V--YDANEHKQDFLSDVERLRFADQCIDSVNV----KQRSILEYTASYEDLI 372
+ D D +R AD I N Q + + + + L
Sbjct: 432 MRATTGVSDFADLRDDHLEVRGADLVIRDDNGWSLTLQDTAFDVLRTDDFLF 483
>gi|317447650|emb|CBJ55056.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 245
Score = 134 bits (337), Expect = 4e-29, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 88/231 (38%), Gaps = 32/231 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ ++ ADHLLR+ + F+ ++ +
Sbjct: 13 NGKPSFSVDQAADHLLRENAAYRDVDGNGRIDLTYTFLTSASSATMNKHGISGFSQFSNL 72
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYD-----SR 97
+ A A+ W+ V ++TF E + D N + P + S
Sbjct: 73 QKGQAVLAMQSWADVANVTFTEKASGGDFHMTFGNYSAGQDGAAAFAYLPGTNEKYHTSG 132
Query: 98 YFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYE 154
+ + + G HEIGH LGL HPG YN G D DY
Sbjct: 133 TDGTSWYLINNSYTANINPGLNNYGRQTLTHEIGHTLGLDHPGDYNAGTGNPSYKDADYG 192
Query: 155 NDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQKIYGAPKGS 201
D+ SVMSY+ ++ + + G Y + P++ DI A+Q +YG+ +
Sbjct: 193 QDTRGYSVMSYWGENNTNQNFTKGGVEAYASGPLIXDIAAIQXLYGSNYNT 243
>gi|227820120|ref|YP_002824091.1| protease [Sinorhizobium fredii NGR234]
gi|227339119|gb|ACP23338.1| putative protease [Sinorhizobium fredii NGR234]
Length = 509
Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats.
Identities = 96/497 (19%), Positives = 153/497 (30%), Gaps = 87/497 (17%)
Query: 9 TTERIADHLLRDQYW----SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG---- 60
T + D LL W + F ++ AR+A+
Sbjct: 14 TGNELVDGLLSGYAWSGTITYAFPTSASAYNYGPEKYDGFNSISQAQINTARFAMVVGYG 73
Query: 61 -------EWSKVVDLTFEE-TSIHSDIKFISSN---NGYVCTPRY---DSRYFMEINFDK 106
+ F ++ + I+F SN Y P + ++
Sbjct: 74 SAANDGFSVEGFTNARFAAGSASSATIRFAQSNEPDTAYAYMPGNYSQAGDIWFGTDYIG 133
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
G H LHE+GHALGL H G + D S +T +
Sbjct: 134 TVADYRKPVAGNYAWHTLLHELGHALGLKHGHEQEGAFEPLPSQYDSIEYSIMTY--RGY 191
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ------------ 213
+ +G T M++DI A+Q++YGA + GN +YK
Sbjct: 192 VGGYGYAYEQYGAPQTFMMADIAALQEMYGADFSTNSGNTVYKWTPGSGATLVNGAVGIA 251
Query: 214 -KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--------IGGYEKNMTIAQ 264
+ TI+D GG D DLT IDL S+ +GG + A
Sbjct: 252 PGANRIFATIWDGGGSDTYDLTAYKIALK-IDLRPGKVSTFSADQLAWLGGGSNDGYAAG 310
Query: 265 H------------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ ++IE+V+G SGND + GN A N + +GND+ +G +G DT +
Sbjct: 311 NIFNALLYHGDTRSLIENVLGGSGNDAITGNQAANKLYGYAGNDIMNGDTGHDTLY--GG 368
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
K+Y + L + L
Sbjct: 369 VGSDKLYGSSGNDALVGD--------------------------AGNDALYGGTGADRLY 402
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D F + GRD +D + + G A ++
Sbjct: 403 GGSGNDTFAFRLLAESTVGATGRDTIYDFAASDRINVSAIDANSTASGDQAFTFVGTAAF 462
Query: 433 EGRNPDAFKALEYIASH 449
G+N + ++
Sbjct: 463 SGKNGELRYDRAASDTY 479
>gi|302873081|ref|YP_003841714.1| hypothetical protein Clocel_0162 [Clostridium cellulovorans 743B]
gi|307688762|ref|ZP_07631208.1| hypothetical protein Ccel74_11408 [Clostridium cellulovorans 743B]
gi|302575938|gb|ADL49950.1| hypothetical protein Clocel_0162 [Clostridium cellulovorans 743B]
Length = 644
Score = 134 bits (336), Expect = 5e-29, Method: Composition-based stats.
Identities = 69/267 (25%), Positives = 105/267 (39%), Gaps = 31/267 (11%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESM-KHFYEFGLSEGR--DITFDSYLYLGSYDDLRNV 414
Y + D+ + +G + ++ +HF G +EGR + Y Y DL+
Sbjct: 342 VFDPDYYLKNNSDVAKAVGANNYKGAYEHFITSGYNEGRKSSPIYHGSYYQNCYSDLK-- 399
Query: 415 FGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
D H+IT+G+ E RN F+ + Y + DL A + + H+
Sbjct: 400 -THDFYKLIYHFITYGIHESRNACLNFEPIVYAIRYPDLFKALGN--SDYKPYFTHYLIS 456
Query: 474 GCEEGRFV--------------TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
G EGR FD Y Y DL+ FG DR H+ G+KEGR
Sbjct: 457 GIREGRSGLYDYNFIPNPIENLIFDEKFYADKYPDLKAKFGYDRARLFMHWKVSGIKEGR 516
Query: 520 NPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSY 576
F + Y+ ++ D+ NA + HF GY EGR S ++ Y
Sbjct: 517 TSSYVFDPVYYLKNNSDVSNAVGAN--NYEGAYQHFITSGYNEGRRSSPIYDGSYYQNYN 574
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGR 603
+L D +H++ HG+ EGR
Sbjct: 575 PELR---VYDFYKLIEHFLVHGIHEGR 598
Score = 134 bits (336), Expect = 6e-29, Method: Composition-based stats.
Identities = 69/272 (25%), Positives = 107/272 (39%), Gaps = 31/272 (11%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESM-KHFYEFGLSEGR--DITFDSYLYLGSYDDLRNV 414
Y D+ + +G + +E +HF G +EGR +D Y Y DL+
Sbjct: 163 VFDPDYYLKHNSDVAKAVGANNYEGAYQHFITSGYNEGRRSSPIYDGIYYKNCYSDLK-- 220
Query: 415 FGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
D H++T+G+ EGR+ F+ + Y + DL F + + H+
Sbjct: 221 -TYDFYKLIYHFLTYGIHEGRSACLNFEPIVYAIRYPDLFKNFGN--LDYKPYFTHYLIS 277
Query: 474 GCEEGRFV--------------TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
G EGR FD Y Y DL+ G ++ H+ T G+KEGR
Sbjct: 278 GIREGRSGLYDYNFIPNPIENLIFDEKFYADKYPDLKANLGYNKAKLFMHWKTTGIKEGR 337
Query: 520 NPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSY 576
F Y+ ++ D+ A + +HF GY EGR S ++ Y Y
Sbjct: 338 TSSYVFDPDYYLKNNSDVAKAVGAN--NYKGAYEHFITSGYNEGRKSSPIYHGSYYQNCY 395
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
DL D H+IT+G+ E R ++
Sbjct: 396 SDLKT---HDFYKLIYHFITYGIHESRNACLN 424
Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats.
Identities = 73/281 (25%), Positives = 107/281 (38%), Gaps = 40/281 (14%)
Query: 359 RSILEYTASYEDLIQVIGQ-DVFESMKHFYEFGLSEGR--------------DITFDSYL 403
+ Y Y DL + G D H+ G+ EGR ++ FD
Sbjct: 246 FEPIVYAIRYPDLFKNFGNLDYKPYFTHYLISGIREGRSGLYDYNFIPNPIENLIFDEKF 305
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDL 462
Y Y DL+ G ++ H+ T G+KEGR F Y+ ++ D+ A +
Sbjct: 306 YADKYPDLKANLGYNKAKLFMHWKTTGIKEGRTSSYVFDPDYYLKNNSDVAKAVG--ANN 363
Query: 463 VQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
+ +HF G EGR + Y Y DL+ D H+IT+G+ E RN
Sbjct: 364 YKGAYEHFITSGYNEGRKSSPIYHGSYYQNCYSDLKT---HDFYKLIYHFITYGIHESRN 420
Query: 521 PD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS--------------I 565
F+ + Y + DL A + + H+ G EGRS +
Sbjct: 421 ACLNFEPIVYAIRYPDLFKALGN--SDYKPYFTHYLISGIREGRSGLYDYNFIPNPIENL 478
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
F+ Y Y DL FG DR+ H+ G+KEGR
Sbjct: 479 IFDEKFYADKYPDLKAKFGYDRARLFMHWKVSGIKEGRTSS 519
Score = 123 bits (309), Expect = 9e-26, Method: Composition-based stats.
Identities = 74/274 (27%), Positives = 109/274 (39%), Gaps = 32/274 (11%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
Y Y DL G D + KH+ G+ EGR + FD YL D+
Sbjct: 120 LVFDEKFYADKYPDLKTRFGYDRVKLFKHWKTSGIKEGRTFSCVFDPDYYLKHNSDVAKA 179
Query: 415 FG-SDRGAAARHYITHGVKEG-RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
G ++ A +H+IT G EG R+ + + Y + DL HF
Sbjct: 180 VGANNYEGAYQHFITSGYNEGRRSSPIYDGIYYKNCYSDLK------TYDFYKLIYHFLT 233
Query: 473 FGCEEGRFV--TFDSYLYLGSYDDLRNVFGS-DRGAAARHYITHGVKEGRN--------P 521
+G EGR F+ +Y Y DL FG+ D HY+ G++EGR+ P
Sbjct: 234 YGIHEGRSACLNFEPIVYAIRYPDLFKNFGNLDYKPYFTHYLISGIREGRSGLYDYNFIP 293
Query: 522 DA-----FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLT 574
+ F Y + DL + H+ G +EGR+ + F+PD YL
Sbjct: 294 NPIENLIFDEKFYADKYPDLKANLGYNKAKL---FMHWKTTGIKEGRTSSYVFDPDYYLK 350
Query: 575 SYDDLWNVFGSDRSA-AAQHYITHGMKEGRALGI 607
+ D+ G++ A +H+IT G EGR
Sbjct: 351 NNSDVAKAVGANNYKGAYEHFITSGYNEGRKSSP 384
Score = 106 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 61/224 (27%), Positives = 88/224 (39%), Gaps = 26/224 (11%)
Query: 359 RSILEYTASYEDLIQVIGQ-DVFESMKHFYEFGLSEGR--------------DITFDSYL 403
+ Y Y DL + +G D H+ G+ EGR ++ FD
Sbjct: 425 FEPIVYAIRYPDLFKALGNSDYKPYFTHYLISGIREGRSGLYDYNFIPNPIENLIFDEKF 484
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDL 462
Y Y DL+ FG DR H+ G+KEGR F + Y+ ++ D+ NA +
Sbjct: 485 YADKYPDLKAKFGYDRARLFMHWKVSGIKEGRTSSYVFDPVYYLKNNSDVSNAVG--ANN 542
Query: 463 VQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG-R 519
+ HF G EGR +D Y +LR D H++ HG+ EG R
Sbjct: 543 YEGAYQHFITSGYNEGRRSSPIYDGSYYQNYNPELR---VYDFYKLIEHFLVHGIHEGRR 599
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
F A Y+A + DL F + H+ G +EGR
Sbjct: 600 ACSNFGAKVYVARYSDLFKNFGT--SDYKPYFTHYLISGIKEGR 641
Score = 94.9 bits (234), Expect = 4e-17, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 79/214 (36%), Gaps = 8/214 (3%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
F + + D ++ V +D G A Y V +YI +
Sbjct: 37 DFPALAFTLDKDKIKGVALNDLGKLAIMYGIITVYNVEIHTVEPFYDYIPNPVLSTIPNP 96
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ + + + + FD Y Y DL+ FG DR +H+ T G+KE
Sbjct: 97 SSSPIPGPILNPVPDPVPSPVEDLVFDEKFYADKYPDLKTRFGYDRVKLFKHWKTSGIKE 156
Query: 518 GRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLT 574
GR F Y+ + D+ A + HF GY EGR S ++ Y
Sbjct: 157 GRTFSCVFDPDYYLKHNSDVAKAVGAN--NYEGAYQHFITSGYNEGRRSSPIYDGIYYKN 214
Query: 575 SYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
Y DL D H++T+G+ EGR+ ++
Sbjct: 215 CYSDLKT---YDFYKLIYHFLTYGIHEGRSACLN 245
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 9/127 (7%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESM-KHFYEFGLSEGR--DITFDSYLYLGSYDDLRNV 414
+ Y + D+ +G + +E +HF G +EGR +D Y +LR
Sbjct: 521 VFDPVYYLKNNSDVSNAVGANNYEGAYQHFITSGYNEGRRSSPIYDGSYYQNYNPELRV- 579
Query: 415 FGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
D H++ HG+ EGR F A Y+A + DL F + H+
Sbjct: 580 --YDFYKLIEHFLVHGIHEGRRACSNFGAKVYVARYSDLFKNFG--TSDYKPYFTHYLIS 635
Query: 474 GCEEGRF 480
G +EGR
Sbjct: 636 GIKEGRL 642
>gi|220924211|ref|YP_002499513.1| Lipopolysaccharide biosynthesis protein-like protein
[Methylobacterium nodulans ORS 2060]
gi|219948818|gb|ACL59210.1| Lipopolysaccharide biosynthesis protein-like protein
[Methylobacterium nodulans ORS 2060]
Length = 1366
Score = 134 bits (336), Expect = 6e-29, Method: Composition-based stats.
Identities = 53/252 (21%), Positives = 84/252 (33%), Gaps = 32/252 (12%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNV 414
Y +SYED + G D H+ E+G +EGR FD YL +Y +
Sbjct: 22 SGFDKFWYLSSYED-VAAAGVDPIH---HYLEYGAAEGRLPTPLFDPEWYLRAYPE---- 73
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
+ ++ G + GRNP L + +++E+ P L F +
Sbjct: 74 SARNHRLPFVDFMHEGARLGRNPHPLCDLAWFSANEEQDRGADIHPFL------DFLDAV 127
Query: 475 CEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIA 531
R FD+ Y Y D+ HYI G K +P F Y+
Sbjct: 128 NSNSRKLHPLFDASWYTKKYPDVLTSGF----PPFVHYILLGAKRRYDPHPLFDTAYYLD 183
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA 591
I + ++ + + FN YL D+ +
Sbjct: 184 QFGSDIAEIDNPLVDYL-----YNRSNWNKSPHPLFNSSWYLAQNADV----ANHGLNPL 234
Query: 592 QHYITHGMKEGR 603
+H++ G EGR
Sbjct: 235 RHFVQSGFSEGR 246
Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats.
Identities = 56/291 (19%), Positives = 98/291 (33%), Gaps = 45/291 (15%)
Query: 325 IIVYDANEHKQDFLSDVE-RLRFADQCIDSV---NVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + +QD +D+ L F D + + + + L
Sbjct: 101 DLAWFSANEEQDRGADIHPFLDFLDAVNSNSRKLHPLFDASWYTKKYPDVLTSGF----- 155
Query: 381 ESMKHFYEFGLSEGRDI--TFDSYLYLGS-YDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
H+ G D FD+ YL D+ + Y+ + ++P
Sbjct: 156 PPFVHYILLGAKRRYDPHPLFDTAYYLDQFGSDIAEI-----DNPLVDYLYNRSNWNKSP 210
Query: 438 DA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDD 494
F + Y+A + D+ N + HF G EGR F + Y Y D
Sbjct: 211 HPLFNSSWYLAQNADVANHGLNP-------LRHFVQSGFSEGRKPCALFHTSWYAAHYLD 263
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ + Y+ G + GRNP+ F + Y+ + D+ A P + H
Sbjct: 264 ----GATAQLNPVVDYLCGGAEAGRNPNFVFNSNWYMLHNGDVAAA-KLNPLV------H 312
Query: 554 FSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
+ G+ EGR F+ Y Y + +HY+T G++ G
Sbjct: 313 YIMSGWREGRDPGPLFDSSWYQARYPETNR----SDIDPLEHYLTMGLQAG 359
Score = 42.9 bits (99), Expect = 0.16, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 31/103 (30%), Gaps = 11/103 (10%)
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--IT 398
V+ L + + N S + + + H+ G EGRD
Sbjct: 273 VDYLCGGAEAGRNPNFVFNSNWYMLHNGDVAAA-----KLNPLVHYIMSGWREGRDPGPL 327
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
FDS Y Y + HY+T G++ G
Sbjct: 328 FDSSWYQARYPETNRS----DIDPLEHYLTMGLQAGYIGRPVD 366
>gi|172035829|ref|YP_001802330.1| putative peptidase [Cyanothece sp. ATCC 51142]
gi|171697283|gb|ACB50264.1| putative peptidase [Cyanothece sp. ATCC 51142]
Length = 1143
Score = 133 bits (335), Expect = 8e-29, Method: Composition-based stats.
Identities = 72/352 (20%), Positives = 122/352 (34%), Gaps = 54/352 (15%)
Query: 26 YFIRYKPDVLTTHRLSF--DITELNPNAQEVARWALGEWSKVVDLTFEETSI-----HSD 78
+ Y+ D T + E++ + R V+D+ F E + D
Sbjct: 92 TYSFYEDDDFTNSYYGSESGVKEVSNAVKINYREIFAWLENVIDVDFVEVDEINKDTYGD 151
Query: 79 IKFISSNN---GYVCTPRY-----DSRYFMEINFD-KADVWRYGIGKGTILSHNALHEIG 129
I+ SNN Y P + N+D D + G +HE+G
Sbjct: 152 IRIQDSNNPNYAYAYYPTSPYSKVAGDVHLNSNYDRYGDTNGFQHDPGKHGYMTLVHELG 211
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
HALGL H S G + D+ SVM+Y + AT M DI
Sbjct: 212 HALGLAHTHS--------GTPLSAQLDNTDNSVMTYN--------FTGNSAATFMPLDIA 255
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQ------------KDSPFIQTIYDSGGDDLLDLTLIG 237
A+Q +YGA + G+ Y + QT++DS G D LD + +
Sbjct: 256 ALQHLYGAKTHNAGDTTYVFGNYIDQVTVNGVSLVETSNRTKQTLWDSDGIDTLDFSGLN 315
Query: 238 GVKN--YIDLNTESW---SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ ++DL + + + ++ +E+V+ SS ND + N+ N
Sbjct: 316 AQSSGFHLDLRQGGLLSKTFSSTTDYSTAVSYGFDVENVINSSSNDTIYLNNVANEISGY 375
Query: 293 -----SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+G+D S D S + +I+ + + ++
Sbjct: 376 LSDRFTGHDKIYYGSNEDILKLDYASNEVTQTQSGQNLILNFGSNGSIELVN 427
>gi|329848424|ref|ZP_08263452.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843487|gb|EGF93056.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1128
Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats.
Identities = 84/537 (15%), Positives = 154/537 (28%), Gaps = 68/537 (12%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDV--------LTTHRLSFDITELNPNAQEVARWAL 59
YT ++ D L W+ I + + + N Q A +A
Sbjct: 149 YTGNQLVDGALFGSRWTVTNITFSFPTTGEFYNTPYYDPAYTAEQVPFNAAQQSAALYAF 208
Query: 60 GEWSKVVDLTFEETSIHSDIK-FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK-- 116
S +LTF + + ++ I + F + D+W G+
Sbjct: 209 ALISSYTNLTFTQVTESAETHGIIRMSQTTADGAGSAEGNFPGSDASDGDIWFGQTGQPF 268
Query: 117 ------GTILSHNALHEIGHALGLMHPGS-------------YNGGYPVYGVDNDYENDS 157
G +HEIGH +GL H G + D
Sbjct: 269 YLTPQIGNWGMATMIHEIGHTMGLKHGHDSYTTFDLTVGGYLDGPGPHFGTAALPADKDG 328
Query: 158 FLTSVMSYFMPQD---SMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ 213
+ SVM+Y S F T M +DI A+Q +YGA + +++Y
Sbjct: 329 WAWSVMTYRSAPGFTASFQGEQFNQPQTYMQADIAALQFMYGANFNSNATDSVYTFNATT 388
Query: 214 KD-------------------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ +TI+D G D D + + ++L+ +S+
Sbjct: 389 GEMFINGVGQGVPEFDAVAGVGKIFRTIWDGNGTDTYDFSNFTNNQ-TVNLSPGGFSTFS 447
Query: 255 GYEKNMT-------IAQHTVIESVVGSSGN-----DVVIGNSANNVFFESSGNDVFDGSS 302
+ + AQ I + + G+ + I S N++ + + G
Sbjct: 448 LAQLGDSRPLLAGFTAQPGNIGNALQYQGDARSLIENAITGSGNDLLIGNQATNTLTGGL 507
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT+ + S + +V+ + + L + N I
Sbjct: 508 GNDTYVVDSESDAVVEALDQGTDLVFATSSFTLGANVENLTLLTTTDATGNGNDLANVIY 567
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
T SY+ L + G D + + + FG + A
Sbjct: 568 GGTGSYDVLNGLGGNDFIYGATDLPGAAQTLNETGLQQHDTIANAINLPAASFGLNSDAN 627
Query: 423 ARHYIT--HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ T H G + ++ ++ F + + G
Sbjct: 628 IANSTTAPHTTVTGTGDGFYDMYSFVVDAAGVVGTFDIDASVSLDSFVELFDAGGTR 684
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 61/556 (10%), Positives = 141/556 (25%), Gaps = 51/556 (9%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D S + E ++ S + E ++ + + N
Sbjct: 510 DTYVVDSESDAVVEALDQGTDLV---FATSSFTLGANVENLTLLTTTDATGNGNDLANVI 566
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNAL-------HEIGHALGLMHPG-----SY 140
+ + +N + + YG + I +A+ L
Sbjct: 567 YGGTGSYDVLNGLGGNDFIYGATDLPGAAQTLNETGLQQHDTIANAINLPAASFGLNSDA 626
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
N M F+ + + +F A+ + V + G
Sbjct: 627 NIANSTTAPHTTVTGTGDGFYDMYSFVVDAAGVVGTFDIDASVSLDSFVELFDAGGTRLA 686
Query: 201 SLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
++ F+ + + G + + + L GY
Sbjct: 687 FDDDSGTSEGGGGSTSGADSFLSYTFTAAGTYYIRVGKYSTTTTSLPL-----DVGDGYT 741
Query: 258 KNMTIAQHT----------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+++A + ++++ G +G+D ++G + ++ +G+D DG +G +T
Sbjct: 742 LQVSLAGNALPPALPNPADGVDAMDGGAGDDTLMGVAGDDYLTGGAGDDSLDGGTGNNTA 801
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y+A S + + D L + L L +
Sbjct: 802 SYFAASGAVTVS-LALQGTAQNTIGAGTDTLVNFRNL---------AGSFHDDSLTGDDN 851
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ G + + + D+ ++ + Y+
Sbjct: 852 ANLINGQGGANTMAGGLGNDTYWIQSAGDVIIEAAGAGTDLVLSLIDYSLAGKQIENLYL 911
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD--S 485
+ ++++ L D + G + FD
Sbjct: 912 AGNGNLNGTGNGLANDIRGTEGNNILSGSGGHDTLDGQNGDDRLDGGTGNDSLIGFDGND 971
Query: 486 YLYLGSYDDLRNV----FGSDRGAAARHYITHGVKEGRNPDAFKALEYI--ASHEDLINA 539
+ + D+ N G+D ++ Y E + A + L
Sbjct: 972 TYVVDAVGDVVNENEYMTGTDLVESSITYTLGAYVENLTLTGSANINGTGHAGNNVLTGN 1031
Query: 540 FADAPDLVQAGKDHFS 555
AG D +
Sbjct: 1032 SGTNVLTGGAGDDTYV 1047
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 47/351 (13%), Positives = 93/351 (26%), Gaps = 30/351 (8%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLT-THRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
D L +Y D + + + AL ++
Sbjct: 769 AGDDTLMGVAGDDYLTGGAGDDSLDGGTGNNTASYFAASGAVTVSLALQGTAQNT----I 824
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDK-ADVWRYGIGKGTILSHNALHEIGH 130
+ + F + + IN A+ G+G T +A I
Sbjct: 825 GAGTDTLVNFRNLAGSFHDDSLTGDDNANLINGQGGANTMAGGLGNDTYWIQSAGDVIIE 884
Query: 131 ALGLMHP---GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
A G + ++N Y + + + D + D
Sbjct: 885 AAGAGTDLVLSLIDYSLAGKQIENLYLAGNGNLNGTGNGLANDIRGTEGNNILSGSGGHD 944
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ Q + + ++ G+D + +G V N + T
Sbjct: 945 TLDGQN---------------GDDRLDGGTGNDSLIGFDGNDTYVVDAVGDVVNENEYMT 989
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + +E++ S N G++ NNV +SG +V G +G DT
Sbjct: 990 GTDLVESSITYTL----GAYVENLTLTGSANINGTGHAGNNVLTGNSGTNVLTGGAGDDT 1045
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ + ++ + + VE L AD +
Sbjct: 1046 YVIQNAADNVVEANNAGIDLIVSSVTYSL-SGKQVENLTLADGAGNINGTG 1095
>gi|56698492|ref|YP_168868.1| type I secretion target repeat-containing protein [Ruegeria pomeroyi
DSS-3]
gi|56680229|gb|AAV96895.1| type I secretion target repeat protein [Ruegeria pomeroyi DSS-3]
Length = 2164
Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats.
Identities = 86/506 (16%), Positives = 166/506 (32%), Gaps = 35/506 (6%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ T + I + +D G G ++ I G
Sbjct: 680 NGGAGADTVLGGQADDILIGGEGSDSLDGGAGNDLVIFDADDVAIRGGDGFDSALYSGTS 739
Query: 144 YPVYGVDND----------YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ + + + + S ++ + D G A ++S
Sbjct: 740 SITFDLAANGFERASGGDASDTLIAEYTSTSVWLYGRAGQDLLRGGGADDLLSGGEGNDT 799
Query: 194 IYGAPKGSLGNNIYKIE---VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+Y +G+++ Q + G D LD GG + ++
Sbjct: 800 LY----AQVGDDLVIGGIGQDQLHGEDGDDYLLGGDGHDNLD----GGNGDDQLFGGDNE 851
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G + + T+ + + G +G+DV+ G N+ G+D +G G DT +
Sbjct: 852 DTLWGRDGDDTLYGDAANDVLRGEAGDDVLFGGDHNDRLMGGDGDDFLNGGEGRDTIYGG 911
Query: 311 APSY-LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
A Y ++ + +K +D+ L+ L +
Sbjct: 912 AGDDVAYGGAEYDLFFDGDGDDVYKGGGGNDIFELQTHSGQNVVQGGLGTDTLRLNGHRD 971
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY------LYLGSYDDLRNVFGSDRGAAA 423
+ E G +G + + S D + +V ++
Sbjct: 972 MWQWESVHKTSQVQTGTVE-GGPDGGQPIYSTAHQGKGQYIFYSGDAVVHVQDVEQVVFL 1030
Query: 424 RHYITHGVK-EGRNPDAFKALEYIASHEDLINA--FADAPDLVQVGKDHFSNFGCEEGRF 480
+ + + +L Y+AS++DLI + +G+DH+ N+G E R
Sbjct: 1031 GNSGKTFWSHKALEDEEAFSLNYVASYDDLIANDEVDNTSSNWTIGRDHWVNYGQAENRE 1090
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
VTF+ YL + + + G D AA RHYI G G + F A +Y+ ++ D+ + F
Sbjct: 1091 VTFNPLQYLAANPSVYQLHGFDLTAATRHYIDTGHDAGLSRGDFDAEQYLKNYSDMRSQF 1150
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT 566
A H+ G GR+
Sbjct: 1151 GADL---SAATRHYIEHGRAAGRTDD 1173
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/437 (14%), Positives = 119/437 (27%), Gaps = 39/437 (8%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
S +G T R + D G +I + + G +G
Sbjct: 1267 STSGSEDTLRGGDGADVIYAGADDDSVFGDSGSDSIAGQDGDDILRGQDGSDSITGGDGQ 1326
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL- 202
+YG D D + + + ++ + D +G V ++G
Sbjct: 1327 DTLYGHDGA---DVLVGGLGNDYVRGGNGADRQWGGEGDDSVYGDAGADTLFGENGNDTL 1383
Query: 203 ----GNNIY---KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G+++ + +Y G+D L D L G V +
Sbjct: 1384 KGHDGSDVLLGGEGNDTLDGMNGSDRLYGEAGNDSLVGDLGDDRLEGNVGDDTLSGGSGN 1443
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT---- 306
+ G E + +++ +++ G G D + G N++ + + G D DG S D
Sbjct: 1444 DYLDGGEGDDSLSGGNAQDALFGGEGADTLDGGGDNDILYGNDGTDSLDGGSANDALHGG 1503
Query: 307 -------------FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
YA S R + + D S +E L ++
Sbjct: 1504 AGADTLNGGDGIDAASYAGSSEAVYVRLDGTNASNFTGDAVGDVFSGIENLFGSEHDDQL 1563
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD----SYLYLGSYD 409
++L + L + G D G D LY G+
Sbjct: 1564 YGDASHNVLWGADGNDTLNGLAGNDDLMGGDGADRLIGDSGIDRLSGESGADSLYGGADR 1623
Query: 410 DLRNVFGSDRGA--AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
D D A + G + ++ ++ D + G
Sbjct: 1624 DFLFGGADDDHLEGGAGNDSLSGGDGNDSIYVGADDANVSGNDTADGGAGDDLIIGSNGY 1683
Query: 468 DHFSNFGCEEGRFVTFD 484
DH + D
Sbjct: 1684 DHLKGGDGNDTLNGGDD 1700
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/493 (12%), Positives = 123/493 (24%), Gaps = 48/493 (9%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D G G ++ NA + G +YG D
Sbjct: 1430 GNVGDDTLSGGSGNDYLDGGEGDDSLSGGNAQDALFGGEGADTLDGGGDNDILYGNDGTD 1489
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV-QKIYGAPKGSLGNNIYKI--- 209
D + + ++ G A AV ++ G + +
Sbjct: 1490 SLDGGSANDALHGGAGADTLNGGDGIDAASYAGSSEAVYVRLDGTNASNFTGDAVGDVFS 1549
Query: 210 ----------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ Q ++ + G+D L+ G N + + + G
Sbjct: 1550 GIENLFGSEHDDQLYGDASHNVLWGADGNDTLN----GLAGNDDLMGGDGADRLIGDSGI 1605
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++ + +S+ G + D + G + ++ +GND G G D+ + A
Sbjct: 1606 DRLSGESGADSLYGGADRDFLFGGADDDHLEGGAGNDSLSGGDGNDSIYVGADDANVSGN 1665
Query: 320 RFENAI-----------IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + D L+ + L A++ SI
Sbjct: 1666 DTADGGAGDDLIIGSNGYDHLKGGDGNDTLNGGDDLATAERDTLEGGTGNDSITSGQVVI 1725
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFD--SYLYLGSYDDLRNVFGSDRGAAARHY 426
D + I D +G D+ + L +D G D +
Sbjct: 1726 PDADRQIYGDYMYGGGGDDTITGGKGDDVIYTGGPTDNLVGFDHASGGDGDDLIHGSNGK 1785
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
G + A + L + E +
Sbjct: 1786 DLLFGDAGNDTLTGGNDGITADADTLDGGDGNDSLTSGQTLA-------PEAGREGLGDH 1838
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA------SHEDLINAF 540
L+ + DD ++ G E D ++ A ++
Sbjct: 1839 LFGQAGDDTLTGGAANDVLK----GGSGNDELWGGDGNDSIYSGAAEANQSGNDTADGGA 1894
Query: 541 ADAPDLVQAGKDH 553
D + G DH
Sbjct: 1895 GDDLLVGSNGYDH 1907
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 65/468 (13%), Positives = 112/468 (23%), Gaps = 39/468 (8%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI-LSHNALHEIGHALGLMHPGSY 140
+N T + + I + D + G G T+ + L
Sbjct: 1658 DDANVSGNDTADGGAGDDLIIGSNGYDHLKGGDGNDTLNGGDDLATAERDTLEGGTGNDS 1717
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
V D D + Y P + G
Sbjct: 1718 ITSGQVVIPDADRQIYGDYMYGGGGDDTITGGKGDDVIYTGGPT-------DNLVGFDHA 1770
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL--TLIGGVKNYIDLNTESWSSIGGYEK 258
S G+ + S ++ G+D L I + +D + S G
Sbjct: 1771 SGGD----GDDLIHGSNGKDLLFGDAGNDTLTGGNDGITADADTLDGGDGNDSLTSGQTL 1826
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + + G +G+D + G +AN+V SGND G G D+ + A
Sbjct: 1827 APEAGREGLGDHLFGQAGDDTLTGGAANDVLKGGSGNDELWGGDGNDSIYSGAAEAN--- 1883
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ D + + L ++ L +DL D
Sbjct: 1884 ----------QSGNDTADGGAGDDLLVGSNGYDHLKGGDGNDTLNGG---DDLATAER-D 1929
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
E + D + G T G E N
Sbjct: 1930 TLEGGAGNDSITSGQVETPDADRQAFGDRMYGGGGDDTITGGKGDDVIYTSGPTE--NLV 1987
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
F + + + G D G ++G D+ D L +
Sbjct: 1988 GFDHASGGDGDDQIFGSNGKDLLHGDAGNDTL--TGGDDGITADADTLYGGDGNDHLTSG 2045
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
A H E L +++ L +
Sbjct: 2046 QTDAPEAGREALGDHFYGEA----GNDTLTGGKANDYLEGGTGADSFV 2089
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 29/311 (9%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ + S D D G + ++ L+ Y+
Sbjct: 1847 TLTGGAANDVLKGGSGNDELWGGDGNDSIYSGAAEANQSGNDTADGGAGDDLLVGSNGYD 1906
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP-----MVSDIVAVQKIYG 196
G D D T+ + G TP D +
Sbjct: 1907 HLKGGDGNDTLNGGDDLATAERDTLEGGAGNDSITSGQVETPDADRQAFGDRMYGGGGDD 1966
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G G+++ ++ GDD + G + ++ G
Sbjct: 1967 TITGGKGDDVIYTSGPTENLVGFDHASGGDGDDQI----FGSNGKDLLHGDAGNDTLTGG 2022
Query: 257 EKN-----MTIAQHTVIESVVGSSGN----------DVVIGNSANNVFFESSGNDVFDGS 301
+ T+ + + + D G + N+ ND +G
Sbjct: 2023 DDGITADADTLYGGDGNDHLTSGQTDAPEAGREALGDHFYGEAGNDTLTGGKANDYLEGG 2082
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G D+F + + I F + D + F+D + +
Sbjct: 2083 TGADSFVFLSDFGQDTIADFS-----TSQSGETIDLSGVSQITSFSDLTTNHLTQSGSDA 2137
Query: 362 LEYTASYEDLI 372
L + +
Sbjct: 2138 LISDGAGNTIT 2148
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 55/252 (21%), Gaps = 23/252 (9%)
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
SG DT + + S + +Y + +D L D
Sbjct: 1243 GSGNDTIYADSTSTGHWLYLNQQEST-----SGSEDTLRG------GDGADVIYAGADDD 1291
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ + + + G D+ +G+D + L N +
Sbjct: 1292 SVFGDSGSDSIAGQDGDDILRGQDGSDSITGGDGQDTLYGHDGADVLVGGLGNDYVRGGN 1351
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
A R + G L ++ L L G D
Sbjct: 1352 GADRQWGGEGDDSVYGDAGADTLFGENGNDTLKGHDGSDVLLGGEGNDTLDGMNGS---- 1407
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
D D L G DR G L+ + L
Sbjct: 1408 ---DRLYGEAGNDSLVGDLGDDRLE-----GNVGDDTLSGGSGNDYLDGGEGDDSLSGGN 1459
Query: 541 ADAPDLVQAGKD 552
A G D
Sbjct: 1460 AQDALFGGEGAD 1471
>gi|86140056|ref|ZP_01058620.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Roseobacter sp. MED193]
gi|85823306|gb|EAQ43517.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Roseobacter sp. MED193]
Length = 438
Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats.
Identities = 63/334 (18%), Positives = 118/334 (35%), Gaps = 28/334 (8%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDK 106
+ + AL +++ F + SD + Y + D
Sbjct: 57 MTTAEKAAFEDALEHIESYLNVDFVQAKRTSDPDLNVAAISLPGAVIGSGGYSIRYQGDS 116
Query: 107 ADVWRYGIGKGTI-------LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
W + + LHE+GHA+GL HP + ++ L
Sbjct: 117 ITQWDGFVAYDATLNLSSERYTDLLLHELGHAMGLQHPFEA-------ETPIPEQYENNL 169
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI 219
S+MSY + + M+ D++A+Q I+GA + + Y +
Sbjct: 170 YSLMSYQENP-----YNGEHSDALMLFDVLALQDIWGAAVNNEDDTRYTGSRTNT----V 220
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+I+DSGG D LD T +DL ++SS ++ + T IE+ G+ GND
Sbjct: 221 DSIWDSGGIDTLDATGRTESV-TVDLRQGAFSSFDSDH-DVVVTFGTEIENAFGALGNDR 278
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFL 338
++GN +N+ G D+ G +G D ++ + +++ + +
Sbjct: 279 IVGNYLDNLLRGHGGRDLLAGKAGDDQL--EGGWGDDTLWGDQGDDVLFGGRGKDRVKGG 336
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +RL + +L + I
Sbjct: 337 TGDDRLIGSRGKDTLDGQAGDDLLSGGHGRDIFI 370
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 48/166 (28%), Gaps = 6/166 (3%)
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSV 354
D S G+DT + + + A +D++ +++E A V
Sbjct: 221 DSIWDSGGIDTLDATGRTESVTVDLRQGAFSSFDSDHDVVVTFGTEIENAFGALGNDRIV 280
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD----SYLYLGSYDD 410
++L + L G D E +G D+ F + G+ DD
Sbjct: 281 GNYLDNLLRGHGGRDLLAGKAGDDQLEGGWGDDTLWGDQGDDVLFGGRGKDRVKGGTGDD 340
Query: 411 -LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
L G D GR+ FK + D
Sbjct: 341 RLIGSRGKDTLDGQAGDDLLSGGHGRDIFIFKNQGGADTVSDFKPG 386
>gi|27381138|ref|NP_772667.1| protease [Bradyrhizobium japonicum USDA 110]
gi|27354305|dbj|BAC51292.1| bll6027 [Bradyrhizobium japonicum USDA 110]
Length = 844
Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats.
Identities = 72/331 (21%), Positives = 111/331 (33%), Gaps = 56/331 (16%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS-YNGG 143
+ Y S + G ALHE+GHALGL H
Sbjct: 85 TSYAYYPGNYASGGDVWFGTQYNYSL---AALGNYYFTTALHELGHALGLKHSQETGGVA 141
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSL 202
+D + ++ P + ++GY T M +DI+A+Q +YGA
Sbjct: 142 NVAVPSAHDDSEYTVMSYRSYVGGPLTGYTNEAYGYPQTYMANDILALQTMYGANYTTQS 201
Query: 203 GNNIYKIEVQQ-------------------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
G +Y + +TI+D GG D DL+ + I
Sbjct: 202 GTTVYTWSTATGQEFINGVGQPADNGGAGGSANRIFETIWDGGGVDTYDLSNYTTNLS-I 260
Query: 244 DLNTESWSSIGG-----------YEKNMTIAQ------HTVIESVVGSSGNDVVIGNSAN 286
+LN + S N+ A + I++ +G SGND ++GN+
Sbjct: 261 NLNPGASSVFSSVQLAYLGNGHYASGNVYNAYLYNNDARSYIDNAIGGSGNDTIVGNAIA 320
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-------------- 332
N SGND G G DT A + ++ V +
Sbjct: 321 NTLNGGSGNDTITGGGGNDTILGGAGTDTAVYSGSRSSYSVSYNSATQTFTVTDLRGSLF 380
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D ++ VE +FADQ + S + LE
Sbjct: 381 DGTDTITGVEYFQFADQTVASETLTGPLTLE 411
>gi|332705045|ref|ZP_08425130.1| matrixin [Lyngbya majuscula 3L]
gi|332356222|gb|EGJ35677.1| matrixin [Lyngbya majuscula 3L]
Length = 1485
Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats.
Identities = 82/397 (20%), Positives = 142/397 (35%), Gaps = 72/397 (18%)
Query: 14 ADHLLRDQYWSNYFIRYKP----DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLT 69
AD LL +W I Y + + + ++E++ ++ R L + + +
Sbjct: 8 ADSLLDHHHWDTNTITYSFYNNANSGSYYGPETGVSEISEKTKDNIRSILETLERYIAVD 67
Query: 70 FEETSIHSD-------IKFISSNNGYVCTP-------RYDSRYFMEINFDKADVWRYGIG 115
F E + + + Y P S +++ ++A G
Sbjct: 68 FHEVADTATDYGLLRYMVSDGPGYAYTYLPEGFNTNVGNWSDVAGDVHLNQAYDTTGNNG 127
Query: 116 ----KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G +HEIGH+LGL HP Y +G + D+ +VMSY
Sbjct: 128 FADDPGNHGYMTVIHEIGHSLGLKHPNPYEDND--HGPFLPFNEDNTTNTVMSYN----- 180
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI------------ 219
+ TPM+ DI A+Q IYGA + + G+ Y + +
Sbjct: 181 ---FAGKSAITPMIYDIQALQSIYGAREYNHGDTTYSFDSVNYYTDGSEYYGKTKPIEEI 237
Query: 220 -QTIYDSGGDDLLDLTLIG--GVKNYIDLNTESWSSIGGYEKN----------------- 259
QT++DSGG + LD + + + D+N + +
Sbjct: 238 KQTLWDSGGVNTLDFSNLTFVEKGYHFDMNEGGILTTQEAYNDSSYKARSDDSGREYVTS 297
Query: 260 ---MTIAQHTVIESVVGSSGNDVVIGNSANNVFFE-----SSGNDVFDGSSGLDTFFYYA 311
IA TV E+++ S+ ND +I NSA N+F S+G+D+ G + LDT
Sbjct: 298 EFGTAIAFGTVFENLINSNSNDYIIANSAANIFSGYELEISTGDDLIKGWNYLDTLDLSN 357
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
++ ++ L D + +D
Sbjct: 358 YAFSSVTQTQSGDDLILGLGSDSSITLKDYHTVSESD 394
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 70/218 (32%), Gaps = 13/218 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + T++ G D L D +L GGV N + ++ G +
Sbjct: 1177 FGNDFLRGTWGNDTLHGGSGHDTLGGGQGDDSLSGGVGNDRIMGDVGNDTLEGSSGEDNL 1236
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + + + + +D + G + SGND G G D+ S +
Sbjct: 1237 SGGSGDDLIEAGTEDDSLRGGKGGDTLKGGSGNDYLRGDDGNDSL--EGGSGNDSLIGAS 1294
Query: 323 NAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ ++H S L + LE + + LI G D+ +
Sbjct: 1295 GDDTLDGGSDHDTLKGSSGNNYLIGGSGDDLLDGGRDHDSLEGGSGNDYLIGGSGDDLLD 1354
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+H G D YL GS +D N G+
Sbjct: 1355 GGQHHDFLKGGSGND-----YLIGGSGNDTLNGVGNGS 1387
Score = 83.7 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 84/251 (33%), Gaps = 10/251 (3%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D D L GG + + ++ G + T++ + +S+VG GND + G N+
Sbjct: 1131 DRYDNRLEGGHGDDRLWGNRNNDTLIGGSGHDTLSGGSGDDSLVGGFGNDFLRGTWGNDT 1190
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVERLRFA 347
SG+D G G D+ +I + ++ E S + +
Sbjct: 1191 LHGGSGHDTLGGGQGDDSL--SGGVGNDRIMGDVGNDTLEGSSGEDNLSGGSGDDLIEAG 1248
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ K L+ + + L G D E + G D
Sbjct: 1249 TEDDSLRGGKGGDTLKGGSGNDYLRGDDGNDSLEGGSGNDSLIGASGDDTL----DGGSD 1304
Query: 408 YDDLRNVFGSD-RGAAARHYITHGVKEGRNPDAFKALEYI--ASHEDLINAFADAPDLVQ 464
+D L+ G++ + + G ++ + + +Y+ S +DL++ L
Sbjct: 1305 HDTLKGSSGNNYLIGGSGDDLLDGGRDHDSLEGGSGNDYLIGGSGDDLLDGGQHHDFLKG 1364
Query: 465 VGKDHFSNFGC 475
+ + G
Sbjct: 1365 GSGNDYLIGGS 1375
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/218 (14%), Positives = 56/218 (25%), Gaps = 3/218 (1%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+I + G G+D + GN N+ SG+D G SG D+ +
Sbjct: 1127 SIRGDRYDNRLEGGHGDDRLWGNRNNDTLIGGSGHDTLSGGSGDDSLV--GGFGNDFLRG 1184
Query: 321 FENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
++ + H + L + LE ++ ++L G D+
Sbjct: 1185 TWGNDTLHGGSGHDTLGGGQGDDSLSGGVGNDRIMGDVGNDTLEGSSGEDNLSGGSGDDL 1244
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
E+ +G D D N G
Sbjct: 1245 IEAGTEDDSLRGGKGGDTLKGGSGNDYLRGDDGNDSLEGGSGNDSLIGASGDDTLDGGSD 1304
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
L+ + + LI D D +
Sbjct: 1305 HDTLKGSSGNNYLIGGSGDDLLDGGRDHDSLEGGSGND 1342
Score = 42.9 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 76/284 (26%), Gaps = 18/284 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S D D G G I + + G
Sbjct: 1201 GGGQGDDSLSGGVGNDRIMGDVGNDTLEGSSGEDNLSGGSGDDLIEAGTEDDSLRGGKGG 1260
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G + G D + + + D +D + S +
Sbjct: 1261 DTLKGGSGNDYLRGDDGNDSLEGGSGNDSLIGASGDDTLDGGSDHDTLKGSSGNNYLIGG 1320
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G G + + + GDDLLD GG + +
Sbjct: 1321 SGDDLLDGGRD----HDSLEGGSGNDYLIGGSGDDLLD----GGQHHDFLKGGSGNDYLI 1372
Query: 255 GYEKNMTIAQ-------HTVIESVVGSSGNDVVIGNSANNVFFESSGND---VFDGSSGL 304
G N T+ + I+ +VG + +D I + F++ G++
Sbjct: 1373 GGSGNDTLNGVGNGSRGNGEIDVLVGGAWSDTFILGDDHRAFYQGKGDNDYAEIYDLESK 1432
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
D Y + Y + +N + A K D ++ + + +D
Sbjct: 1433 DIIQLYGVADQYDLVDADNGLPGSTALYFKNDLIAVLHDVSVSD 1476
>gi|255263135|ref|ZP_05342477.1| serralysin [Thalassiobium sp. R2A62]
gi|255105470|gb|EET48144.1| serralysin [Thalassiobium sp. R2A62]
Length = 365
Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats.
Identities = 85/331 (25%), Positives = 137/331 (41%), Gaps = 27/331 (8%)
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
+N S + + G+ + +HEIGHALGL H G
Sbjct: 33 NMGGTNANGTGLIVDASINIGKDWIEDDWTLNDGVDLDSYSFQTYIHEIGHALGLGHAGP 92
Query: 140 YNGGYPVY---GVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCATPMVSDIVAVQKIY 195
YNG G D + NDS+ SVMSYF +++ +DA+F Y TPM++DI A+ ++Y
Sbjct: 93 YNGSADYTQFEGGDAAFINDSWQMSVMSYFSQTENTFIDATFAYVVTPMLADIQAIHQLY 152
Query: 196 GAP-KGSLGNNIYKIEVQQKD---------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ IY + +P T+ D GG D +D+++ G + I+L
Sbjct: 153 NTSGNIRDTDTIYGVGSTAGGYYDTVLGLANPVTFTVVDDGGVDTIDVSVFGSDQ-MINL 211
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N S SSI G NM+I T IE+VV SG+DVV N N G +G D
Sbjct: 212 NGNSISSIAGNVGNMSIMDGTEIENVVMGSGDDVVYANDVGNDN---------YGGAGTD 262
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
Y A + ++ + D L+ ++ ++ ++ + ++++
Sbjct: 263 IVSYIASDAAVTVNLGAGNA---NSGYAQGDTLTGIQGVQGSEYGDILIGASVVNLMDGG 319
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + G D+ E+ S G D
Sbjct: 320 DGDDSISVGGGDDIVEAGDGNDSVIASAGND 350
>gi|260426907|ref|ZP_05780886.1| peptidase domain protein [Citreicella sp. SE45]
gi|260421399|gb|EEX14650.1| peptidase domain protein [Citreicella sp. SE45]
Length = 843
Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats.
Identities = 100/621 (16%), Positives = 165/621 (26%), Gaps = 94/621 (15%)
Query: 3 NIKPVYTTERIAD-------HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVA 55
+ YT E + + + Y N
Sbjct: 107 DGSGSYTLETAVAPPPDPLEAIDWGTQLPDNEVTYYFAPNGVTADGVTSEGYNAYEMARF 166
Query: 56 RWALGEWSKVVDLTFEETSIHSDIKFIS---------SNNGYVCTPR-YDSRYFMEINFD 105
A + +LTF E + + F + GY+ P + + +
Sbjct: 167 EAAFAMIATYTNLTFTEVNSAAAADFTFVLDTNELPSNLYGYMNPPGEPNPGVGVFNGNN 226
Query: 106 KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN------GGYPVYGVDNDYENDSFL 159
+ G +HE+GH LGL HP G + + +
Sbjct: 227 WDRSAGGSLDLGGDGFFTVIHELGHGLGLAHPHDTGGTSEVMTGVDGSSDTGTFSLNQGI 286
Query: 160 TSVMSYFMPQDSMM------DASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
+VMSY D + G + M DI +Q+ YGA GN +Y ++
Sbjct: 287 FTVMSYNSSFVEGPVGTPAPDTNSGSMGSFMAFDIALLQQKYGANPNTGSGNTVYTLDDD 346
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT----------ESWSSIGGYEKNMTI 262
+ IYD GG D + IDL S+I G TI
Sbjct: 347 TS---YWLAIYDVGGTDTI--VNDSNTAATIDLRAASLLFEAGGGGFASAIDGIAGGFTI 401
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF--------------- 307
A TVIE+ G + D + GN+ NV +GND G G DT
Sbjct: 402 ANGTVIENATGGAAGDTLSGNAIANVLVGLAGNDTIFGRRGHDTISGGTGNDSIDAGLGN 461
Query: 308 -FYYAPSYLYKIYRFENAIIVY-----------------DANEHKQDFLSDVERLRFAD- 348
+ + + + D ++ ER+ +D
Sbjct: 462 DIVAGGIGADDMDGGAGRDTLTYAASGAAVNIRLGSSNNTGGDAEGDIITSFERVVGSDF 521
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ + LE + L + V G +I G
Sbjct: 522 NDVMRAMDLAGTTLEGGDGNDRLYGGMNAQVLRGEAGNDTITGYGGPNINQS-----GIG 576
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
D + FG+D A + G + A+ + L+
Sbjct: 577 DVIDGGFGNDILA-----GSAGADTIIGGFGNDIIAGNANDDSLVGNNGKDTVTYANSDA 631
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH-----YITHGVKEGRNPDA 523
+ + L ++ + D AA G
Sbjct: 632 GVNVLLNSASNSGGHAAGDILEGFERVVGSDFDDTIAANNVNAATIEGGAGNDRIIGGGN 691
Query: 524 FKALEYIASHEDLINAFADAP 544
F++L ++ + P
Sbjct: 692 FQSLRGGGGNDTITGYSGADP 712
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/387 (10%), Positives = 93/387 (24%), Gaps = 65/387 (16%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
+ + T E + S N + D G G +I +
Sbjct: 401 IANGTVIENATGGAAGDTLSGNAIANVLVGLAGNDTIFGRRGHDTISGGTGNDSIDAGLG 460
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+ +G G + + + L S + + + SF
Sbjct: 461 NDIVAGGIGADDMDGGAGRDTLTYAASGAAVNIRLGSSNNTGGDAEGDIITSFERVVGSD 520
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+D++ + G G + + Q + G+D + +
Sbjct: 521 FNDVMRAMDLAG--TTLEGGD---GNDRLYGGMNAQVLRGEAGNDTITGYGGPNINQ--- 572
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV------- 297
+ I G N +A ++++G GND++ GN+ ++ ++G D
Sbjct: 573 --SGIGDVIDGGFGNDILAGSAGADTIIGGFGNDIIAGNANDDSLVGNNGKDTVTYANSD 630
Query: 298 ----------------------------------------------FDGSSGLDTFFYYA 311
+G +G D
Sbjct: 631 AGVNVLLNSASNSGGHAAGDILEGFERVVGSDFDDTIAANNVNAATIEGGAGNDRIIGGG 690
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + I Y + + D+ + ++ + +
Sbjct: 691 NFQSLRGGGGNDTITGYSGADPSSSSVRDI--IVGDVGNDVLAGAGGDDTIDGGTGNDLI 748
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDIT 398
G D+ F F +
Sbjct: 749 RGNAGDDILNGGTGFDTFIFGLTSETD 775
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 68/233 (29%), Gaps = 21/233 (9%)
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
+ D+ G TI+ I NG V ++
Sbjct: 570 INQSGIGDVIDGGFGNDILAGSAGADTIIGGFGNDIIAGNANDDSLVGNNGKDTVTYANS 629
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK-IE 210
D + L S + + F D +A A +
Sbjct: 630 DAGVNVLLNSASNSGGHAAGDILEGFERVVGSDFDDTIA------ANNVNAATIEGGAGN 683
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ Q++ GG+D + + I +
Sbjct: 684 DRIIGGGNFQSLRGGGGNDTITGYSGADPSS--------------SSVRDIIVGDVGNDV 729
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ G+ G+D + G + N++ ++G+D+ +G +G DTF + S I F++
Sbjct: 730 LAGAGGDDTIDGGTGNDLIRGNAGDDILNGGTGFDTFIFGLTSETDTILDFQD 782
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 80/250 (32%), Gaps = 13/250 (5%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
A V R G TI + + +G + G + D
Sbjct: 537 GGDGNDRLYGGMNAQVLRGEAGNDTITGYGGPNINQSGIGDVIDGGFGNDILAGSAGADT 596
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG--SLGNNIYKIEV 211
F +++ DS++ + T SD + A +I +
Sbjct: 597 IIGGFGNDIIAGNANDDSLVGNNGKDTVTYANSDAGVNVLLNSASNSGGHAAGDILEGFE 656
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE-- 269
+ S F TI + + T+ GG N + ++ S+ G N TI ++ +
Sbjct: 657 RVVGSDFDDTIAANNVN---AATIEGGAGNDRIIGGGNFQSLRGGGGNDTITGYSGADPS 713
Query: 270 ------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+VG GNDV+ G ++ +GND+ G++G D +
Sbjct: 714 SSSVRDIIVGDVGNDVLAGAGGDDTIDGGTGNDLIRGNAGDDILNGGTGFDTFIFGLTSE 773
Query: 324 AIIVYDANEH 333
+ D +
Sbjct: 774 TDTILDFQDD 783
>gi|284052046|ref|ZP_06382256.1| hemolysin-type calcium-binding region [Arthrospira platensis str.
Paraca]
Length = 331
Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 77/224 (34%), Gaps = 18/224 (8%)
Query: 398 TFDSYLYLGSYDDLRNV-----FGSDRGAAARHYITHGVKEGRNPDAFKALE-YIASHED 451
FD +YL DL H+ G EGR AF ++ Y+ + D
Sbjct: 68 LFDEEVYLAQNPDLAQFKLELEAAGFEFNLREHFREFGKFEGREFSAFFSVTRYLEKNTD 127
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ + HF +FG E R + F + Y + DL + + H
Sbjct: 128 I-----SLVINREEAFSHFLDFGLNEAREFSDFFSASFYAEANPDLAAITQETLVSKFAH 182
Query: 510 YITHGVKEGRNPD-AFKALEYIASHEDLINAFA--DAPDLVQAGKDHFSNFGYEEGRSIT 566
++ G E R F A Y+ + D+ L + HF G E R +
Sbjct: 183 FLGVGQFENRRCSRVFDANNYLQLNPDVSQLLQESANLGLQISAFSHFITRGRSENRQFS 242
Query: 567 --FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
F+ YL DL S A H++ G+ E R +S
Sbjct: 243 NIFDVSEYLQLNPDLVPFVESGEINAIDHWVRFGISERREFSLS 286
Score = 98.7 bits (244), Expect = 3e-18, Method: Composition-based stats.
Identities = 59/221 (26%), Positives = 83/221 (37%), Gaps = 24/221 (10%)
Query: 364 YTASYEDLIQ-----VIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFG 416
Y A DL Q F +HF EFG EGR+ + F YL D+ V
Sbjct: 74 YLAQNPDLAQFKLELEAAGFEFNLREHFREFGKFEGREFSAFFSVTRYLEKNTDISLV-- 131
Query: 417 SDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+R A H++ G+ E R D F A Y ++ DL + HF G
Sbjct: 132 INREEAFSHFLDFGLNEAREFSDFFSASFYAEANPDLAAITQETLVSK---FAHFLGVGQ 188
Query: 476 EEGRFVT--FDSYLYLGSYDDL-----RNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 527
E R + FD+ YL D+ + + +A H+IT G E R F
Sbjct: 189 FENRRCSRVFDANNYLQLNPDVSQLLQESANLGLQISAFSHFITRGRSENRQFSNIFDVS 248
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
EY+ + DL+ DH+ FG E R + +
Sbjct: 249 EYLQLNPDLVPFVESGEIN---AIDHWVRFGISERREFSLS 286
Score = 50.6 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 50/147 (34%), Gaps = 20/147 (13%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITF 399
E F+D S Y + DL + + + HF G E R F
Sbjct: 148 EAREFSD---------FFSASFYAEANPDLAAITQETLVSKFAHFLGVGQFENRRCSRVF 198
Query: 400 DSYLYLGSYDDLR-----NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
D+ YL D+ + + +A H+IT G E R F EY+ + DL+
Sbjct: 199 DANNYLQLNPDVSQLLQESANLGLQISAFSHFITRGRSENRQFSNIFDVSEYLQLNPDLV 258
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRF 480
DH+ FG E R
Sbjct: 259 PFVESGEIN---AIDHWVRFGISERRE 282
>gi|170744798|ref|YP_001773453.1| peptidase metallopeptidase [Methylobacterium sp. 4-46]
gi|168199072|gb|ACA21019.1| peptidase metallopeptidase [Methylobacterium sp. 4-46]
Length = 641
Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats.
Identities = 90/375 (24%), Positives = 135/375 (36%), Gaps = 73/375 (19%)
Query: 34 VLTTHRLSFDI-TELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN----NGY 88
+S+ + + AQ + AL WS + D+ F+E + + SN NG
Sbjct: 65 GTPGGVVSYAFDSSVGVEAQAAYKAALTLWSDIADIKFQEVAWSAAASIQISNTPEANGD 124
Query: 89 VCTPRYDS-------------------RYFMEINFDKADVWRYGIGKGTILS-HNALHEI 128
P ++IN D G +HE
Sbjct: 125 TFVPSNGYSVPGRGVTDLPTQMAPHTRGGAVQINVSADDAAFKISSIGAPSQIGTVVHET 184
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA------- 181
GHALGL H G YNG Y G + Y D+ S+MSY PQDS Y
Sbjct: 185 GHALGLGHAGRYNGSYDASGQFSAY--DTQSWSIMSYIDPQDSAAPYFDKYPVQGTQWTS 242
Query: 182 ------------TPMVSDIVAVQKIYGAP--KGSLGNNIYKIEVQQKDSP---------- 217
+PM+ DI+A Q++YGA G +Y D+
Sbjct: 243 YYKGAEFKGGAQSPMMLDILASQRLYGASKSSTFSGGQVYGFNSNISDASRLLFDFSVNR 302
Query: 218 -FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE---KNMTIAQHTVIESVVG 273
I T+Y+SG ++ LDL+ + I+LN S+SS N+ IA +T I+ VG
Sbjct: 303 VPIVTLYNSGTNNTLDLSGF-DTPSTINLNPGSFSSASASGLLVNNIGIAYNTRIDKAVG 361
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANE 332
+G+D I N + G + Y + R + V +
Sbjct: 362 GAGDDTFILNGDGDTIDGGGGTNR---------VVIKGDRANYSVERTGAASATVTNTAT 412
Query: 333 HKQDFLSDVERLRFA 347
D L++V+ + F
Sbjct: 413 GAIDRLTNVQDITFD 427
>gi|158335049|ref|YP_001516221.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158305290|gb|ABW26907.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
Length = 1607
Score = 130 bits (326), Expect = 1e-27, Method: Composition-based stats.
Identities = 88/635 (13%), Positives = 160/635 (25%), Gaps = 69/635 (10%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
T+ + I + + D D + G + H +
Sbjct: 968 VSTTRIDTLPLIFRGTAFDDNGSGGAVDDKLYGGDGNDTLKGLDGDDYLAGHAGDDRLDG 1027
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G Y G ++G + D DS + ++ D GY +
Sbjct: 1028 GDGDDFLHGYAGDDHLWGANGD---DSLQGGDGNDYLGGSWGSDTLDGYRGNDFLRGHQG 1084
Query: 191 VQKIYGAP-----KGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLL-----DLTLIG 237
++G G G++ + ++ G+D L D LIG
Sbjct: 1085 NDTLWGGEGKDTLDGGEGDDNLGGSLGDDHLNGGKGNDFLHGHEGNDHLWGAEGDDNLIG 1144
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G + + ++ GY N ++ H +++ G G D + G N+ S G D
Sbjct: 1145 GDGDDYLGGSWGSDTLDGYRGNDSLNGHQGDDTLWGGEGEDTLHGGEGNDSLGGSLGKDR 1204
Query: 298 FDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQ 349
DG +G DT + + + + + + D + LR
Sbjct: 1205 LDGGNGNDTLNGHEGDDHLWGANGDDSLQGGDGNDYLGGSWGSDTLDGYRGNDFLRGHQG 1264
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ L+ + L +G D + EG D + SY
Sbjct: 1265 NDTLWGGEGEDTLDGGEGEDYLGGSLGNDHLNGHRGNDTLNGHEGDDTLWGSYGDDNLDG 1324
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ + + G + D L + L + G DH
Sbjct: 1325 GDGHDSLNGHDGNDTLWGAAGNDTLQGLDGNDYLGGSLGDDRLDGGNGNDTLNGHEGDDH 1384
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY------------------- 510
++ GS+ D H
Sbjct: 1385 LWGANGDDSLQGGDGDDYLGGSWGDDTLDGYRGNDFLRGHQGHDTLWGGEGKDTLDGGDG 1444
Query: 511 --------------ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
+G + L +++L D AG+D+
Sbjct: 1445 DDYLGGSLGDDHLNGAYGEDSLSGHEGNDILWGSYGNDNLNGGDGDDSLTGGAGQDYLV- 1503
Query: 557 FGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM 616
G + F A A + + + IS QF
Sbjct: 1504 -GGGGSDLFVLEAT---ANNKGTIADFVVGEDAIA--FRSAQLNTLPLGLISAQQFALGA 1557
Query: 617 NLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYD 651
+ A+ +D +L+ D G G
Sbjct: 1558 AATT-----AEQRFIYDQANGELFYDADGSGAAQQ 1587
>gi|317447637|emb|CBJ55048.1| alkaline metalloprotease [Pseudomonas fluorescens]
Length = 203
Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 73/203 (35%), Gaps = 16/203 (7%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISS 84
F+ ++ N + A A+ W+ V ++TF E + D
Sbjct: 1 YTFLTSATQSTMNKHGISGFSQFNTQQKAQAALAMQSWADVANVTFTEKASGGDGHMTFG 60
Query: 85 NN--------GYVCTPRYDSRYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALGL 134
N + P + Y + + + HEIGH LGL
Sbjct: 61 NYSXGQDGAAAFAYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGL 120
Query: 135 MHPGSYNGGY-PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIV 189
HPG YN G D Y D+ S+MSY+ ++ + S G Y + P++ DI
Sbjct: 121 AHPGDYNAGNGNPTYNDATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIA 180
Query: 190 AVQKIYGAP-KGSLGNNIYKIEV 211
A+QK+YGA + Y
Sbjct: 181 AIQKLYGANLSTRATDTTYGFNS 203
>gi|163743491|ref|ZP_02150869.1| PaxA, putative [Phaeobacter gallaeciensis 2.10]
gi|161383194|gb|EDQ07585.1| PaxA, putative [Phaeobacter gallaeciensis 2.10]
Length = 483
Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats.
Identities = 95/480 (19%), Positives = 155/480 (32%), Gaps = 91/480 (18%)
Query: 25 NYFIRYKPD--VLTTHRLSFDITE----------LNPNAQEVARWALGEWSKVVDLTFEE 72
+F+ PD +D+ ++P +++ A+ W++V +L
Sbjct: 27 YHFLTSVPDYYDYDPDFGDYDVGGEYLPEGATVNMDPAERQMMLQAVAAWNEVANLNLIP 86
Query: 73 T-SIHSDIKFISSNNGYVCT----------------PRYDSRYFMEINFDKADVWRYGIG 115
+D+ F S++ P ++ + V G
Sbjct: 87 ARGGTADLTFASAHFADAGLFGFIADFPDPSDLGTRPSPAGDLWLNNSNPDQYVPGIGPI 146
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
G + LHE+GHALGL HP G +VMSY
Sbjct: 147 LGHTSWNTYLHELGHALGLHHPNEMPENPTTPG----------QFTVMSYLPHPGEADLD 196
Query: 176 SF--GYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQ------------ 220
G+ TPM+ D+ A+Q +YGA Y + + Q
Sbjct: 197 QDLQGWALTPMLWDMQALQALYGANTETRTDATSYFGDGDGRGDQAYQYGADDMTVQGGD 256
Query: 221 --------TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT------ 266
TI+D+GG DL+D + + G + IDL +S+IG E N+ +A
Sbjct: 257 GVARNVSLTIWDAGGQDLIDASDVAGN-SRIDLRPGQYSTIGALENNVAMAAAVRVDGRT 315
Query: 267 --VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+IE G +GND + GN A N ++G D G+ D ++
Sbjct: 316 LNLIEDAWGGAGNDHLTGNGAANELAGNAGRDTLAGARNSD--VLIGGQGSDRLQG--GK 371
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+D L + L+ + + G DVF +
Sbjct: 372 GHDALEGGRGRDTLKG---------------GAGQDTLDGGDGNDRMAGGRGADVFVFSQ 416
Query: 385 HFYEFGLSEGRD-ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ D I + + + DLR+ RGA +G AF L
Sbjct: 417 GADVVIDFQSNDRIDMRATTGVSDFADLRDDHLEVRGADLVIRDDNGWSLTLQDTAFDVL 476
>gi|163737436|ref|ZP_02144853.1| Alkaline metalloprotease precursor PrtA [Phaeobacter gallaeciensis
BS107]
gi|161388962|gb|EDQ13314.1| Alkaline metalloprotease precursor PrtA [Phaeobacter gallaeciensis
BS107]
Length = 482
Score = 129 bits (323), Expect = 2e-27, Method: Composition-based stats.
Identities = 73/336 (21%), Positives = 110/336 (32%), Gaps = 56/336 (16%)
Query: 67 DLTFEETSIHSD-------IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
++ F E SD + S G + A
Sbjct: 150 NVDFVEVQGSSDPDLNLGSVTIPGSTVGIGGYSMSFRGDDITRWDGYAVFDNTLDMSQDN 209
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
LHE+GHALGL H N E DS L SVMSY + D
Sbjct: 210 RESLILHELGHALGLQHTHDSN---------LPEEYDSNLYSVMSYRENPLNGQD----- 255
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
M+ D++A+Q I+GA + GN Y+ + ++D+GG D + +
Sbjct: 256 SDAMMLFDVLALQDIWGAADFNTGNTTYRGSRT----DTVDVVWDTGGTDTFNASNRTNA 311
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG----- 294
+DL +SS ++TIAQ IE+ +G G D + GN +NN G
Sbjct: 312 VA-LDLREMHFSSFDADS-DVTIAQGVTIENAIGGRGRDRITGNDSNNRLVGGGGRDTLR 369
Query: 295 ----------------------NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
ND +G+ G D + + L+ R + D +
Sbjct: 370 GDGGNDALNGNSGVDLLVGGGGNDRLNGAGGNDRLVGNSGADLFIFARKGGNDTIRD-FQ 428
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D L V AD + + +
Sbjct: 429 DDIDTLRIVGHGSKAD-VLARASEVGDDLYFDLEGN 463
>gi|126657191|ref|ZP_01728357.1| hypothetical protein CY0110_24721 [Cyanothece sp. CCY0110]
gi|126621462|gb|EAZ92173.1| hypothetical protein CY0110_24721 [Cyanothece sp. CCY0110]
Length = 1137
Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats.
Identities = 74/365 (20%), Positives = 125/365 (34%), Gaps = 60/365 (16%)
Query: 18 LRDQYWS---NYFIRYKP---DVLTTHRLSF--DITELNPNAQEVARWALGEWSKVVDLT 69
L W+ + I Y D + + E++ + R V+++
Sbjct: 74 LSGYQWNLGIDRIITYSFFEDDDFSNSYYGSESGVKEVSNAVKNSYREIFSWLENVINVD 133
Query: 70 FEETSI-----HSDIKFISSNN---GYVCTPRYD-----SRYFMEINFDK-ADVWRYGIG 115
F E + DI+ SNN Y P + N+D+ D +
Sbjct: 134 FVEVDEINKDTYGDIRIQDSNNPNYAYAYYPTSAYSKVAGDVHLNSNYDRLGDTNGFQHD 193
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
G +HE+GHALGL H S G E D+ SVM+Y
Sbjct: 194 PGKHGYMTLVHELGHALGLSHTHS--------GTPLSSELDNTDNSVMTYN--------F 237
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ------------KDSPFIQTIY 223
+ AT M DI A+Q +YGA + G+ Y + QT++
Sbjct: 238 TGNSAATFMPLDIAALQHLYGAKSHNAGDTTYVFGNYIDQVSVNGISLVETSNRTKQTLW 297
Query: 224 DSGGDDLLDLTLIGGVKN--YIDLNTES---WSSIGGYEKNMTIAQHTVIESVVGSSGND 278
DS G D LD + + + ++DL + + I+ +E+V+ SS +D
Sbjct: 298 DSDGIDTLDFSGLNAQSSGFHLDLRGGGLLSKTFSTTTSYSTAISYDFEVENVINSSSDD 357
Query: 279 VVIGNSANNVFFESS-----GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ N+ N GND ++ D S+ + +I+ +
Sbjct: 358 KIYLNNVKNEIRGYDTNRVTGNDKIYYATNEDILKLDYSSHEVTTRQSGQNLIINLGSNG 417
Query: 334 KQDFL 338
+ +
Sbjct: 418 SVELV 422
>gi|218440126|ref|YP_002378455.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7424]
gi|218172854|gb|ACK71587.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7424]
Length = 768
Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats.
Identities = 73/374 (19%), Positives = 132/374 (35%), Gaps = 69/374 (18%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITEL-----NPNAQEVARWALGEWSKVVDLTFEETSI 75
W + + Y + +++ +E + + R L V+++ F E +
Sbjct: 109 FSWGDRKLTYSFYEDSIFNGTYNGSETGVKEVSNAIKNNVRSILNWLENVINIDFVEVTE 168
Query: 76 H----SDIKFISSN---NGYVCTPRY------DSRYFMEINFDK-ADVWRYGIGKGTILS 121
++F+ SN Y P + N+D+ D + G +
Sbjct: 169 SVNNYGRMRFMLSNGPSYAYAYYPSSDSMTSLSGDIHLNPNYDRLGDTNGFQHLAGRHGN 228
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
+ +HEIGHALGL HP + ++++ +VM+Y +
Sbjct: 229 LSLIHEIGHALGLKHPHEGSF-------TLAPQDNNTTNTVMTYN--------FTGKPAG 273
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT------------IYDSGGDD 229
T M D+ A+Q +YGA + + IY+ + I+DSGG D
Sbjct: 274 TFMGYDVNALQSLYGAKDYNSTDTIYQFTTRVDQFYVNDQLFLNTPNQTKQLIWDSGGKD 333
Query: 230 LLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMT----------------IAQHTVIESV 271
LD + + + DLN + + + I + VIE +
Sbjct: 334 TLDFSQLSANSSGYRFDLNEGNILTAKNAYNGTSYTVNGVTYYTTTYGTAIGYYVVIEDL 393
Query: 272 VGSSGNDVVIGNSANNVFFESS-----GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ SS ND + N+A N F S GND++ +S DT + +
Sbjct: 394 INSSSNDEIFANNAANRFKGYSPTLKTGNDIYWNTSNNDTLDLSSYQSSDVTQTKNGNDL 453
Query: 327 VYDANEHKQDFLSD 340
V + N + + +
Sbjct: 454 VLNLNGNGTITVKN 467
>gi|329848980|ref|ZP_08264008.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844043|gb|EGF93612.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1863
Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats.
Identities = 107/618 (17%), Positives = 182/618 (29%), Gaps = 87/618 (14%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDV--------LTTHRLSFDITELNPNAQEVARWAL 59
++ + D +L WS+ + Y + N Q R+AL
Sbjct: 135 FSGNQDIDAVLIGSKWSSTSLTYSFPTSGSFYQTPYYDSGYLTNHVVFNAAQQTATRYAL 194
Query: 60 GEWSKVVDLTFEETSIH---------SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW 110
G L+F E + S S + P DS +
Sbjct: 195 GLIYGYTLLSFTEVTESNTTHANLRFSQTTDSSLGSAEGNFPGSDSWDGDVWFGQTGQPY 254
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV-------------DNDYENDS 157
G +HEIGHALGL H S G+ + D +DS
Sbjct: 255 YLTPQIGNWGQATIMHEIGHALGLKHGHSDYTGFDLAPGGYVDGPGPRYGSAALDAAHDS 314
Query: 158 FLTSVMSYFMPQDSMMDASF---GYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ 213
+ S+M+Y D T M +DI A+Q +YGA G + GN Y V
Sbjct: 315 WAYSLMTYRSASGYASDFQGDQFNQPQTYMQNDIAALQYLYGAWFGFNSGNTTYSFNVTT 374
Query: 214 KD-----------------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG- 255
+ +TI+D G D D + ++ I+L +WS++
Sbjct: 375 GELFVNGVGQGTPTLNGGQGKIFRTIWDGNGIDTYDFSNFTDNQS-INLAPGAWSTMSAA 433
Query: 256 -------YEKNMTIAQ--------------HTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ + +A ++IE+ G SGND + GN A N + G
Sbjct: 434 RLVDLRPLDGGVNVAPPGNLANALLYNGDLRSLIENANGGSGNDSIYGNQAGNTLQGNGG 493
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+D GS+G DT + + + + + Y L
Sbjct: 494 DDYGFGSTGNDTLY--GALGNDTLDGWTDNDVAYGDGGDD--------LLMGYFGNDTLS 543
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+L + L G D + + E D+ ++
Sbjct: 544 GGIGNDVLNGEDGNDYLEGDGGNDTLSGSTGNDSYVVREAGDVISEAADAGTDLVWAEIS 603
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD-HFSNF 473
+ G +G + + L G D +S
Sbjct: 604 HTLGANFENLNLFGFGYIDGTGNSLNNVINGNDYNNVLAGGGGTDTINGGAGDDVVYSTG 663
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
V D+ G Y +L + G D + + + + F ++ +
Sbjct: 664 YGAYYGGVGNDTVWAAGGYPELLDGGDGIDLLEVSTAFFDYAINMVTGVTNFATESFV-N 722
Query: 533 HEDLINAFADAPDLVQAG 550
E+L + + + +G
Sbjct: 723 FENLNSGTGNDTLVGTSG 740
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 73/483 (15%), Positives = 115/483 (23%), Gaps = 30/483 (6%)
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
D+ G+ E G S G + +N ++ S L +
Sbjct: 941 DLATGAYTDGSGSLTLLNFENYLGQGAAETVSGTDGDNLIEGNNGNDSISGLLGGDTLNG 1000
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
+ + Y A +V I A + +T+
Sbjct: 1001 GSGNDTVNAGTYSAADLVDGGAGNDVIT-ASGRGTFTGGTGNDYMYAGLGTDETLDGGSS 1059
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D +D TL G + N + E V +GND V G + N
Sbjct: 1060 TDTIDTTLWSGDYVL---------DMITGLTNYAGELYINFEIAVTGAGNDSVSGTAGAN 1110
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+GND DG G+DT + + +V +A+ D + A
Sbjct: 1111 RIETGAGNDWLDGLGGVDTLV--GGTGDDTYVVNSASDVVVEASGEGTDTVRSSVTYTLA 1168
Query: 348 D-----------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ L L G D F ++ D
Sbjct: 1169 GINAEVLVLLGSGNYSGTGNGLSNTLYGNTGNNRLDGGTGNDTLYGGTGNDTFVVNTTGD 1228
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
+ + + + G G + + L
Sbjct: 1229 TIVEFAGEGTDLAEASANYTLSADVENLTLMGTGNINGTGNALGNVITGNTGNNVLAGGT 1288
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS-------YDDLRNVFGSDRGAAARH 509
D VQ D E V L N+ G+ G A
Sbjct: 1289 GDDTFYVQNAGDSVVEANGEGTDTVNSSVTWSLAGSYVETLILTGAANINGTGNGQANAI 1348
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
Y GV L+ A + L D V D+ E I ++
Sbjct: 1349 YGNTGVNSLIGGGGHDVLDGGAGADVLTGNTGDDTYYVDNAGDNVVEANGEGTADIIYSS 1408
Query: 570 DLY 572
Y
Sbjct: 1409 VTY 1411
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 61/532 (11%), Positives = 139/532 (26%), Gaps = 37/532 (6%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + S + E + + R ++ + + E + + + NG T
Sbjct: 1137 DTYVVNSASDVVVEASGEGTDTVRSSVTY--TLAGINAEVLVLLGSGNYSGTGNGLSNTL 1194
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ D G G T + + I + +
Sbjct: 1195 YGNTGNNRLDGGTGNDTLYGGTGNDTFVVNTTGDTI----------------VEFAGEGT 1238
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
++ +S + ++M + +++ G G++ + ++
Sbjct: 1239 DLAEASANYTLSADVENLTLMGTGNINGTGNALGNVITGNTGNNVLAGGTGDDTFYVQNA 1298
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ + +L G + L + + G + I +T + S++
Sbjct: 1299 GDSVVEANGEGTDTVNSSVTWSLAGSYVETLILTGAANINGTGNGQANAIYGNTGVNSLI 1358
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G ++V +G DV G++G DT++ E + ++
Sbjct: 1359 GGGG---------HDVLDGGAGADVLTGNTGDDTYYVDNAGDNVVEANGEGTADIIYSSV 1409
Query: 333 HKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK-HFYEFG 390
+E L I+ + L + G D +
Sbjct: 1410 TYSLGGRYIESLLLTGSANINGTGNSLNQTIVGNTGDNTLTGLGGADYLDGGAGGIDALI 1469
Query: 391 LSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYITHGVKE-GRNPDAFKAL 443
G D + D +R+ + GA I GV +
Sbjct: 1470 GGTGDDTYVNGTGDTITENASEGIDTVRSGITATLGANLEVLILTGVANINGTGNTLDNA 1529
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
Y +++++ + G F Y + + N+ +
Sbjct: 1530 LYGNDGDNVLSGGTGNDSYYVQNAGDTISEASNAGTDSVFSWVTYSIAGKQIENLTLTGA 1589
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
A + L+ H+ L + G D +
Sbjct: 1590 VALNAT-GNNLANVLTGNTLANTLDGSGGHDRLDGGAGIDTLIGGTGNDTYV 1640
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 59/411 (14%), Positives = 112/411 (27%), Gaps = 38/411 (9%)
Query: 104 FDKADVWRYGIGKGTILSHNALHEIG-HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
+ + + G T + E+ + +G P G ++ D
Sbjct: 353 YLYGAWFGFNSGNTTYSFNVTTGELFVNGVGQGTPTLNGGQGKIFRTIWDGNGIDTYDFS 412
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI 222
++ ++ + + D+ + G GN + I+
Sbjct: 413 NFTDNQSINLAPGAWSTMSAARLVDLRPLDG--GVNVAPPGNLANALLYNGDLRSLIENA 470
Query: 223 YDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
G+D + TL G + + ++ G N T+ T + G G+
Sbjct: 471 NGGSGNDSIYGNQAGNTLQGNGGDDYGFGSTGNDTLYGALGNDTLDGWTDNDVAYGDGGD 530
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS----------------YLYKIYRF 321
D+++G N+ GNDV +G G D + I
Sbjct: 531 DLLMGYFGNDTLSGGIGNDVLNGEDGNDYLEGDGGNDTLSGSTGNDSYVVREAGDVISEA 590
Query: 322 ENAIIVYDANEHKQDFLSDVERLR-FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+A E ++ E L F ID +++ L G D
Sbjct: 591 ADAGTDLVWAEISHTLGANFENLNLFGFGYIDGTGNSLNNVINGNDYNNVLAGGGGTDTI 650
Query: 381 ESMKHFYEFGLS--------EGRDITFDSYLY-----LGSYDDLRNVFGSDRGAAARHYI 427
+ G D + + Y G DL V + A
Sbjct: 651 NGGAGDDVVYSTGYGAYYGGVGNDTVWAAGGYPELLDGGDGIDLLEVSTAFFDYAINMVT 710
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ F+ L ++ L+ D G D+ ++ G +
Sbjct: 711 GVTNFATESFVNFENLNSGTGNDTLVGTSGDNIINAGAGNDNVNSSGGSDT 761
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/327 (13%), Positives = 84/327 (25%), Gaps = 23/327 (7%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ NG ++ I DV G G + +
Sbjct: 1332 TGAANINGTGNGQANAIYGNTGVNSLIGGGGHDVLDGGAGADVLTGNTGDD--------- 1382
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
N G V + + D +SV + G + + Q I
Sbjct: 1383 TYYVDNAGDNVVEANGEGTADIIYSSVTYSLGGRYIESLLLTGSANINGTGNSL-NQTIV 1441
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWS 251
G + + + + I + GDD T+ ID +
Sbjct: 1442 GNTGDNTLTGLGGADYLDGGAGGIDALIGGTGDDTYVNGTGDTITENASEGIDTVRSGIT 1501
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + I + G++ ++ + GN +NV +GND + + DT +
Sbjct: 1502 ATLGANLEVLILTGVANINGTGNTLDNALYGNDGDNVLSGGTGNDSYYVQNAGDTISEAS 1561
Query: 312 PSYLYKIYR---------FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ ++ + + A + L L
Sbjct: 1562 NAGTDSVFSWVTYSIAGKQIENLTLTGAVALNATGNNLANVLTGNTLANTLDGSGGHDRL 1621
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEF 389
+ A + LI G D +
Sbjct: 1622 DGGAGIDTLIGGTGNDTYVVDDPTDTL 1648
Score = 42.1 bits (97), Expect = 0.30, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 48/171 (28%), Gaps = 6/171 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEKNMTI 262
+ + + G+D + G + + G I
Sbjct: 1689 LNNVLTGNSNSNILTGGLGNDTYYIQNTGDNVVELSGEGTDTIYSTVTYSLSGRYAEAII 1748
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G+S + + GNS NN G D G G D F + S + F
Sbjct: 1749 LTGSANVNATGNSLTNSLTGNSGNNTLNGKGGADNLTGDLGSDLFLFETASGADTVTDFS 1808
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
A +++ + + + I TA+ D++
Sbjct: 1809 AAQNDTININAYTAGVANNGLVTQSGANVLISLGGGNVITVLTATQADVLA 1859
Score = 41.7 bits (96), Expect = 0.39, Method: Composition-based stats.
Identities = 49/355 (13%), Positives = 89/355 (25%), Gaps = 31/355 (8%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI--GNSANNVFFESSGNDVFD---- 299
T+ + I G N +I+ +++ G SGND V SA ++ +GNDV
Sbjct: 973 GTDGDNLIEGNNGNDSISGLLGGDTLNGGSGNDTVNAGTYSAADLVDGGAGNDVITASGR 1032
Query: 300 ----GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---------------SD 340
G +G D + YA + ++ D D++ +
Sbjct: 1033 GTFTGGTGND--YMYAGLGTDETLDGGSSTDTIDTTLWSGDYVLDMITGLTNYAGELYIN 1090
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
E + +E A + L + G D + ++ D+ +
Sbjct: 1091 FEIAVTGAGNDSVSGTAGANRIETGAGNDWLDGLGGVDTLVGGTGDDTYVVNSASDVVVE 1150
Query: 401 SYLYLGSYDDLRNVFGSDRGAA-ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
+ + A + G G L + L +
Sbjct: 1151 ASGEGTDTVRSSVTYTLAGINAEVLVLLGSGNYSGTGNGLSNTLYGNTGNNRLDGGTGND 1210
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
G D F + L + + G G
Sbjct: 1211 TLYGGTGNDTFVVNTTGDTIVEFAGEGTDLAEASANYTLSADVENLTL---MGTGNINGT 1267
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLT 574
+ + L D VQ D E ++ + L
Sbjct: 1268 GNALGNVITGNTGNNVLAGGTGDDTFYVQNAGDSVVEANGEGTDTVNSSVTWSLA 1322
Score = 37.8 bits (86), Expect = 5.9, Method: Composition-based stats.
Identities = 69/500 (13%), Positives = 130/500 (26%), Gaps = 33/500 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D +G T + + + DV GT EI H LG
Sbjct: 553 GEDGNDYLEGDGGNDTLSGSTGNDSYVVREAGDVISEAADAGT---DLVWAEISHTLGAN 609
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G+ + N+ V++ + + D V Y
Sbjct: 610 FENLNLFGFGYIDGTGNSLNN-----VINGNDYNNVLAGGGGTDTINGGAGDDVVYSTGY 664
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA G +GN+ + + + G DLL+++ ++
Sbjct: 665 GAYYGGVGNDTVW-----AAGGYPELLDGGDGIDLLEVSTAFFDYAI---------NMVT 710
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT--------F 307
N E++ +GND ++G S +N+ +GND + S G DT +
Sbjct: 711 GVTNFATESFVNFENLNSGTGNDTLVGTSGDNIINAGAGNDNVNSSGGSDTVNGQHGNDY 770
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL-EYTA 366
Y + ++ + + + L YT
Sbjct: 771 LYSDAFSNKTYDGGAGNDTIGGGFQYGNTWDGGADTDTLDMALHNFGPATVNLALGTYTT 830
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + + ++ G + I + + G H
Sbjct: 831 TNGTVNVLNFENYTGHNAVEIIIGTAGANVIITAAGNDDIDGGGGADTISGGDGNDFLHS 890
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ GV + I ++ I+A AD L + +
Sbjct: 891 SSGGVVAWYGDGGNDTVTGIFNYTSYIDAGADVDTLDLAYITGGIPPIAFDLATGAYTDG 950
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
+ + N G +GAA T G + ++ + + L +
Sbjct: 951 SGSLTLLNFENYLG--QGAAETVSGTDGDNLIEGNNGNDSISGLLGGDTLNGGSGNDTVN 1008
Query: 547 VQAGKDHFSNFGYEEGRSIT 566
G IT
Sbjct: 1009 AGTYSAADLVDGGAGNDVIT 1028
>gi|238623425|emb|CAS06707.1| alkaline metalloprotease [Pseudomonas fluorescens bv. F]
Length = 277
Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 93/266 (34%), Gaps = 37/266 (13%)
Query: 3 NIKPVYTTERIADHLLRD------------QYWSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP ++ + A LLRD + F+ ++ +
Sbjct: 12 NGKPSFSVDEAATQLLRDGAAYQDKDGSGKIELTYTFLTSASSSTMNKHGITGFSQFSAQ 71
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------GYVCTPRYDSRYFMEI 102
+ A A+ W+ V ++TF E S D N + P + Y
Sbjct: 72 QKAQAALAMQSWADVANVTFTEKSFGGDGHMTFGNYSGGQDGAAAFAYLPGTGAGYDGTS 131
Query: 103 NF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFL 159
+ HEIGH LGL HPG YN G D Y D+
Sbjct: 132 WYLTGGGYNVNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGAPTYNDATYGEDTRG 191
Query: 160 TSVMSYFMPQDSMMDAS----FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ-- 212
SVMSY+ ++ + S Y + P++ DI A+QK+YGA G+ Y
Sbjct: 192 YSVMSYWSESNTDQNFSKSGVEAYASGPLMDDIAAIQKLYGANTTTRTGDTTYGFNSNAG 251
Query: 213 -------QKDSPFIQTIYDSGGDDLL 231
+ +++D+GG D L
Sbjct: 252 RDFLSASSSSDKVVFSVWDAGGKDTL 277
>gi|32455983|ref|NP_861985.1| rb110 [Ruegeria sp. PR1b]
gi|22726335|gb|AAN05131.1| RB110 [Ruegeria sp. PR1b]
Length = 1365
Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats.
Identities = 57/286 (19%), Positives = 95/286 (33%), Gaps = 40/286 (13%)
Query: 348 DQCIDSVNVKQRSILE---YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSY 402
+ + + + S+ + Y D+ V +++H+ FG EGR FD
Sbjct: 7 GESMMTTHADLDSLFQSDWYLEQNPDVADHF---VGSALEHYRHFGWREGRSPHPLFDVA 63
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPD 461
YL + + + HY+ G K+ R+P Y+ + DL+ A +
Sbjct: 64 WYLSQSPECLS----EGLEPLTHYLHFGWKDMRSPHPVLNPAAYLRRNPDLMQADINPWL 119
Query: 462 LVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
+ G +EGR FD+ YL Y+D+ HY+ G +EGR
Sbjct: 120 Y-------YLQSGWQEGRSLHPLFDTRWYLAVYEDVAEAG----IEPLSHYLRRGWREGR 168
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYD 577
A + A + H+ G+ E R F+ Y SY
Sbjct: 169 GAHPLFASGWYAE----TQQLGADENPWL----HYITTGWREMRPPHTRFDARWYHDSYL 220
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
D HY+ G +EG Q + + +
Sbjct: 221 DPLVAVCD----PLVHYLEQGWREGLLPAPGADQLVAQQGVKGAAA 262
Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 72/207 (34%), Gaps = 29/207 (14%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDD 494
F++ Y+ + D+ + F +H+ +FG EGR FD YL +
Sbjct: 18 DSLFQSDWYLEQNPDVADHFV------GSALEHYRHFGWREGRSPHPLFDVAWYLSQSPE 71
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ HY+ G K+ R+P Y+ + DL+ A + +
Sbjct: 72 CLSEGLE----PLTHYLHFGWKDMRSPHPVLNPAAYLRRNPDLMQADINPWL-------Y 120
Query: 554 FSNFGYEEGRS--ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
+ G++EGRS F+ YL Y+D+ HY+ G +EGR +
Sbjct: 121 YLQSGWQEGRSLHPLFDTRWYLAVYEDVAEA----GIEPLSHYLRRGWREGRG---AHPL 173
Query: 612 FKSVMNLSEKSRDKADLSLSFDHKKVD 638
F S + +
Sbjct: 174 FASGWYAETQQLGADENPWLHYITTGW 200
>gi|209524097|ref|ZP_03272648.1| Periplasmic protein TonB links inner and outer membranes-like
protein [Arthrospira maxima CS-328]
gi|209495472|gb|EDZ95776.1| Periplasmic protein TonB links inner and outer membranes-like
protein [Arthrospira maxima CS-328]
Length = 2523
Score = 127 bits (319), Expect = 5e-27, Method: Composition-based stats.
Identities = 58/255 (22%), Positives = 92/255 (36%), Gaps = 18/255 (7%)
Query: 398 TFDSYLYLGSYDDLRNV-----FGSDRGAAARHYITHGVKEGRNPDAFKALE-YIASHED 451
FD +YL DL + A H+ G EGR AF ++ Y+ + D
Sbjct: 67 LFDEEVYLAQNPDLAQFKLELESAGFQFNAREHFREFGKFEGREFSAFFSVTRYLEKNTD 126
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARH 509
L + HF +FG E R + F + Y + DL + + H
Sbjct: 127 L-----SLVINREEAFSHFLDFGLNEAREFSDFFSASFYAEANPDLAAITQETLVSKFAH 181
Query: 510 YITHGVKEGRNPD-AFKALEYIASHEDLINAFA--DAPDLVQAGKDHFSNFGYEEGRSIT 566
++ G E R F A Y+ + D+ + + HF G E R +
Sbjct: 182 FLGFGQFENRRFSRVFDANTYLQLNPDVSQLLQESANLGIQISAFSHFITRGRSENRQFS 241
Query: 567 --FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
F+ YL DL S A H++ G+ E R +S + + LS S
Sbjct: 242 NIFDVSEYLQLNPDLVPFVESGEINAIDHWVRFGISERREFSLSFSISQVLRTLSLSSLT 301
Query: 625 KADLSLSFDHKKVDL 639
+ ++S F + +L
Sbjct: 302 EINISELFAQIESNL 316
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 61/223 (27%), Positives = 85/223 (38%), Gaps = 24/223 (10%)
Query: 364 YTASYEDLIQ-----VIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFG 416
Y A DL Q F + +HF EFG EGR+ + F YL DL V
Sbjct: 73 YLAQNPDLAQFKLELESAGFQFNAREHFREFGKFEGREFSAFFSVTRYLEKNTDLSLV-- 130
Query: 417 SDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+R A H++ G+ E R D F A Y ++ DL + HF FG
Sbjct: 131 INREEAFSHFLDFGLNEAREFSDFFSASFYAEANPDLAAITQETLVSK---FAHFLGFGQ 187
Query: 476 EEGRFVT--FDSYLYLGSYDDL-----RNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 527
E R + FD+ YL D+ + + +A H+IT G E R F
Sbjct: 188 FENRRFSRVFDANTYLQLNPDVSQLLQESANLGIQISAFSHFITRGRSENRQFSNIFDVS 247
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
EY+ + DL+ DH+ FG E R + +
Sbjct: 248 EYLQLNPDLVPFVESGEIN---AIDHWVRFGISERREFSLSFS 287
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 52/147 (35%), Gaps = 20/147 (13%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--F 399
E F+D S Y + DL + + + HF FG E R + F
Sbjct: 147 EAREFSD---------FFSASFYAEANPDLAAITQETLVSKFAHFLGFGQFENRRFSRVF 197
Query: 400 DSYLYLGSYDDLR-----NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
D+ YL D+ + + +A H+IT G E R F EY+ + DL+
Sbjct: 198 DANTYLQLNPDVSQLLQESANLGIQISAFSHFITRGRSENRQFSNIFDVSEYLQLNPDLV 257
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRF 480
DH+ FG E R
Sbjct: 258 PFVESGEIN---AIDHWVRFGISERRE 281
>gi|253998953|ref|YP_003051016.1| Hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
gi|253985632|gb|ACT50489.1| Hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
Length = 1800
Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats.
Identities = 84/632 (13%), Positives = 167/632 (26%), Gaps = 71/632 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ T R + AD G G + + ++
Sbjct: 216 GGGGNDSIAGGAGNDTLRGGAGDDTLDGGVGADSLAGGAGGDLYIVDSIKDKVVEGKDAG 275
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ + + + + + + + + G +Q
Sbjct: 276 QDTIESSVSYTLSANVETLQLTGSLDINAAGNTLANTLIGNSGANILNGGIGADTLQGGD 335
Query: 196 GAPKGSLGN--NIYKIEVQQKDSPFIQTIYDSGGD----DLLDLTLIGGVKNYIDLNTES 249
G + N ++ + I GG D ++ ++ + + +
Sbjct: 336 GNDTYVVDNAGDVVTESEDEGTDTIRIAIATKGGSYSLGDHIENGILANSVAFSLIGNDL 395
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+S+ G T+ +S++G +GND ++G + ++ GND DG G D +
Sbjct: 396 NNSLTGNAAANTLDGGIGNDSLLGGAGNDRLLGGTGDDTLDGGVGNDTMDGGEGSDVYVV 455
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-------------------QC 350
A + + I + D+E L +
Sbjct: 456 NAAGDVIADSGTGVSDIDVVQSTVSYILNEDIENLILSGKGKLSGTGNAQNNLITGNTGA 515
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG-----------LSEGRDITF 399
L + LI +G D E + +EG D+
Sbjct: 516 NRLDGGAGDDTLYGGLGADTLIGGLGADQLEGGAGNDTYEVDDIGDTITELANEGTDLVK 575
Query: 400 DSYLY-LGSYDDLRNVFGSDRGAAARHYITHG------------------VKEGRNPDAF 440
S Y LG Y + + G+D A + +++ +K G+ D +
Sbjct: 576 SSIDYTLGDYLENLILTGTDHINATGNSLSNTLIGNDGNNVLMGGAGVDVLKGGKGDDTY 635
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYDDLRNV 498
+ + + A + + +G + L L + + +
Sbjct: 636 QVNLISSGTGSKMVAKLEDSVSEAAAVSGGDDTLTLQGTVSGLSKATVLTLATGLEHLDA 695
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALE---YIASHEDLINAFADAPDLVQAGKDHFS 555
G+ G A +A ++ L G D +
Sbjct: 696 SGTGDTWL----NLTGNAANNALTGNDANNILRGLAGNDSLSGGAGADTLYGGLGND--A 749
Query: 556 NFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSV 615
G + F+ L + D + F G A G++ V
Sbjct: 750 LSGGDGADVFVFDSKL-SAANVDTIDDFEVGVDRLQLDEAIFGKLV--AKGLTSDNLLVV 806
Query: 616 MNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
A+ L FD + LY D G G
Sbjct: 807 NG--NPQAQDANDYLIFDEEDGSLYYDKDGSG 836
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 45/325 (13%), Positives = 91/325 (28%), Gaps = 15/325 (4%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ S D + N + + D G G T+ +
Sbjct: 694 DASGTGDTWLNLTGNAANNALTGNDANNILRGLAGNDSLSGGAGADTLYGGLGNDALSGG 753
Query: 132 LGLM--------HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
G + + + + D + + + G
Sbjct: 754 DGADVFVFDSKLSAANVDTIDDFEVGVDRLQLDEAIFGKLVAKGLTSDNLLVVNGNPQAQ 813
Query: 184 MVSDIVAVQK----IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+D + + +Y GS KI + Q + + S L
Sbjct: 814 DANDYLIFDEEDGSLYYDKDGSGVGAAIKIGILQNLNGTLSANDFSSSVALASSVTYSLS 873
Query: 240 KNYIDLNTESWSSIGGYEKNMT--IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ ++L S+I G I ++ ++ G +GND + GN N+ +G D
Sbjct: 874 PSQLNLTLTGSSNINGTGNAFGNVINGNSGTNALSGGAGNDTLYGNEGNDSLDGGAGADS 933
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G +G DT+ S + + V ++ ++E L +
Sbjct: 934 LLGGAGDDTYIIDNLSDTIVEFSDQGIDTVK-SSLVSYQLAYNLENLTLLNTAYSGSGNA 992
Query: 358 QRSILEYTASYEDLIQVIGQDVFES 382
+ + T+ + L G D +
Sbjct: 993 ANNYITGTSGFNVLSGNDGDDTLDG 1017
Score = 45.2 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 36/349 (10%), Positives = 93/349 (26%), Gaps = 31/349 (8%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
++ + N + +S D G ++ + G
Sbjct: 880 TLTGSSNINGTGNAFGNVINGNSGTNALSGGAGNDTLYGNEGNDSLDGGAGADSLLGGAG 939
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA---SFGYCATPMVSDIVA 190
+ +D D+ +S++SY + + + + ++ +
Sbjct: 940 -DDTYIIDNLSDTIVEFSDQGIDTVKSSLVSYQLAYNLENLTLLNTAYSGSGNAANNYIT 998
Query: 191 VQKIYGAPKGSLGNNIYKI--------------------------EVQQKDSPFIQTIYD 224
+ G+ G++ E + + I +
Sbjct: 999 GTSGFNVLSGNDGDDTLDGVSGGDSLLGGDGDDVYIINNAGYRVVEFEDEGQDTIISRIS 1058
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+D + GG + L + + G E + I +T + G GND + G +
Sbjct: 1059 YSLEDTDGTGVNGGNVENLILAGSADINGTGNELDNQITGNTGKNLLSGGLGNDTLDGVA 1118
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY-RFENAIIVYDANEHKQDFLSDVER 343
+ +G+DV+ + D + SY + + + + +
Sbjct: 1119 GADTLKGGAGDDVYFVDNIDDVIIEESTSYSSQFTQGHYSNDTPSISADGRYVMFDSYNE 1178
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
F + + + + D Q ++ ++
Sbjct: 1179 FSFGSRTLAVDVFLKDMQTGELSKVSDYSQAFAGEISSDGRYAMYISQG 1227
Score = 39.4 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 59/172 (34%), Gaps = 19/172 (11%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYI-DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
++ I GG D ++ ++ + +I +LN +I G + + + ++VG++
Sbjct: 1545 VEHIAVQGGTDTVNSSVSYTLGAHIENLNLIGSLAING-------SGNELNNTLVGNAAA 1597
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ + GN+ ++ G D G +G DT +Y + + A +
Sbjct: 1598 NSLYGNAGDDSVVGGGGIDQLFGGAGNDTLIGAGS-----LYGNDGDDHLVGAGINNDLL 1652
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + + + L + L+ G D F
Sbjct: 1653 MGG------QGNDYLNGDGGVINTLMGNEGNDTLVGSNGADFMWGGTDADVF 1698
>gi|17233320|ref|NP_490410.1| hypothetical protein alr7304 [Nostoc sp. PCC 7120]
gi|17135842|dbj|BAB78388.1| alr7304 [Nostoc sp. PCC 7120]
Length = 4936
Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats.
Identities = 74/585 (12%), Positives = 146/585 (24%), Gaps = 60/585 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + D D + +G + + + LG
Sbjct: 4399 GGEGNDTLYGGAGNDSLDGGIGNDSLNGEDGNDNLKGDVGNDILNGNAGNDTLDGGLGDD 4458
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + D ND+ + + ++ ++ + + + + +
Sbjct: 4459 VMTGGAGNDIYF---VDSSNDTIIEELNEGTDTVNASINWT--------LGNNLENLTLT 4507
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ + N K + + I + D+ D TL G N S+ G
Sbjct: 4508 GSNGINGTGNALKNIITGNNGDNILSGGDN------DDTLRGNAGNDTLFGGSGNDSLSG 4561
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + +++ G +GND + G + N+ G+DV G +G DT+F S
Sbjct: 4562 GIGDDILNGADGNDNLKGEAGNDTLDGGAGNDSLDGGLGDDVMTGGAGNDTYFVD--SSN 4619
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQV 374
I + ++E L I+ R+ + ++ L
Sbjct: 4620 DTIAEETDGGSDTVNASVSWTLDDNLENLTLTGSNAINGTGNALRNTITGNSADNILSGG 4679
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
D G D L G DD+ S+ ++E
Sbjct: 4680 DNDDTLRGNAGNDILNGGAGND-----SLDGGLGDDVMTGGASNDTYFVDSSNDTIIEEA 4734
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ D + + G + L D
Sbjct: 4735 DGGTDTVRASITLTLGDHLENLILIGNSPIDG-----TGNALRNNITGNVANNILSGGAD 4789
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ D Y G L ++ L+ GKD
Sbjct: 4790 NDTIISGDGDDTL--YGDSG---------NDTLTGGNGNDILVGGMGSDRLTGGNGKD-- 4836
Query: 555 SNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKS 614
TF +T D F G G+ +
Sbjct: 4837 -----------TFAFSAPITDGIDTITDFNPLDDLLRVD------AAGFGGGLVAGTLLA 4879
Query: 615 VMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHD 659
+ + ++ L+ D G G+ + ++ +
Sbjct: 4880 SQFVLGTAAKTTSDRFIYNQSTGALFFDVDGTGSSSQVQIATLSN 4924
Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats.
Identities = 51/366 (13%), Positives = 101/366 (27%), Gaps = 41/366 (11%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+++ G + + I +++ G + + +++ G GNDV+ G + N++
Sbjct: 4248 TSNISGTGNILSNIITGNSGANTLNGKAGDDILNGEGGNDNLKGEDGNDVLNGGAGNDIL 4307
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-------------------YDA 330
G+DV G G D ++ + + + E V A
Sbjct: 4308 DGGLGDDVMTGGVGNDIYYVDSSNDIIIDELNEGTDTVNTIITWTLGNHLENLTLIGSSA 4367
Query: 331 NEHKQDFLSDV-------ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ L ++ L D + L A + L IG D
Sbjct: 4368 INGTGNALKNIIIGNSADNILSGGDNDDILRGGEGNDTLYGGAGNDSLDGGIGNDSLNGE 4427
Query: 384 KHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
G DI + L G DD+ + ++E
Sbjct: 4428 DGNDNLKGDVGNDILNGNAGNDTLDGGLGDDVMTGGAGNDIYFVDSSNDTIIEELNEGTD 4487
Query: 440 FKALEYIAS----HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
+ E+L ++ + + + D+ L
Sbjct: 4488 TVNASINWTLGNNLENLTLTGSNGINGTGNALKNIITGNNGDNILSGGDNDDTLRGNAGN 4547
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDA-------FKALEYIASHEDLINAFADAPDLVQ 548
+FG + I + G + + L+ A ++ L D
Sbjct: 4548 DTLFGGSGNDSLSGGIGDDILNGADGNDNLKGEAGNDTLDGGAGNDSLDGGLGDDVMTGG 4607
Query: 549 AGKDHF 554
AG D +
Sbjct: 4608 AGNDTY 4613
Score = 85.2 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 55/446 (12%), Positives = 108/446 (24%), Gaps = 87/446 (19%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
E ++ + N ++ + D D R G T+ + +
Sbjct: 4500 NLENLTLTGSNGINGTGNALKNIITGNNGDNILSGGDNDDTLRGNAGNDTLFGGSGNDSL 4559
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
+G +G + G + D + + D
Sbjct: 4560 SGGIGDDILNGADGNDNLKGEAGNDTLD-----------------GGAGNDSLDGGLGDD 4602
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-LIGGVKNYIDLNT 247
V G GN+ Y ++ GG D ++ + N +L
Sbjct: 4603 VM--------TGGAGNDTYFVDSSNDTIAEET----DGGSDTVNASVSWTLDDNLENLTL 4650
Query: 248 ESWSSIGGYEKNM--TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++I G + TI ++ + G +D + GN+ N++ +GND DG G D
Sbjct: 4651 TGSNAINGTGNALRNTITGNSADNILSGGDNDDTLRGNAGNDILNGGAGNDSLDGGLGDD 4710
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS-------------------------- 339
+ + + + + + D +
Sbjct: 4711 --VMTGGASNDTYFVDSSNDTIIEEADGGTDTVRASITLTLGDHLENLILIGNSPIDGTG 4768
Query: 340 --------------------DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D + + D L + L+ +G D
Sbjct: 4769 NALRNNITGNVANNILSGGADNDTIISGDGDDTLYGDSGNDTLTGGNGNDILVGGMGSDR 4828
Query: 380 FESMKHFYEFGLS----EGRDITFDSYLYLGSYDDLRNVFGSDRGAAA---RHYITHGVK 432
F S +G D D FG A ++
Sbjct: 4829 LTGGNGKDTFAFSAPITDGIDTITDFNPLDDLLRVDAAGFGGGLVAGTLLASQFVLGTAA 4888
Query: 433 EGRNPDAFKALEYIASHEDLINAFAD 458
+ + A D+ +
Sbjct: 4889 KTTSDRFIYNQSTGALFFDVDGTGSS 4914
>gi|291566536|dbj|BAI88808.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 2483
Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 77/224 (34%), Gaps = 18/224 (8%)
Query: 398 TFDSYLYLGSYDDLRNV-----FGSDRGAAARHYITHGVKEGRNPDAFKALE-YIASHED 451
FD +YL DL H+ G EGR AF ++ Y+ + D
Sbjct: 68 LFDEEVYLAQNPDLAQFKLELEAAGFEFNLREHFREFGKFEGREFSAFFSVTRYLEKNTD 127
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ + HF +FG E R + F + Y + DL + + H
Sbjct: 128 I-----SLVINREEAFSHFLDFGLNEAREFSDFFSASFYAEANPDLAAITQETLVSKFAH 182
Query: 510 YITHGVKEGRNPD-AFKALEYIASHEDLINAFA--DAPDLVQAGKDHFSNFGYEEGRSIT 566
++ G E R F A Y+ + D+ L + HF G E R +
Sbjct: 183 FLGVGQFENRRCSRVFDANNYLQLNPDVSQLLQESANLGLQISAFSHFITRGRSENRQFS 242
Query: 567 --FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
F+ YL DL S A H++ G+ E R +S
Sbjct: 243 NIFDVSEYLQLNPDLVPFVESGEINAIDHWVRFGISERREFSLS 286
Score = 94.1 bits (232), Expect = 6e-17, Method: Composition-based stats.
Identities = 59/221 (26%), Positives = 83/221 (37%), Gaps = 24/221 (10%)
Query: 364 YTASYEDLIQ-----VIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFG 416
Y A DL Q F +HF EFG EGR+ + F YL D+ V
Sbjct: 74 YLAQNPDLAQFKLELEAAGFEFNLREHFREFGKFEGREFSAFFSVTRYLEKNTDISLV-- 131
Query: 417 SDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+R A H++ G+ E R D F A Y ++ DL + HF G
Sbjct: 132 INREEAFSHFLDFGLNEAREFSDFFSASFYAEANPDLAAITQETLVSK---FAHFLGVGQ 188
Query: 476 EEGRFVT--FDSYLYLGSYDDL-----RNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 527
E R + FD+ YL D+ + + +A H+IT G E R F
Sbjct: 189 FENRRCSRVFDANNYLQLNPDVSQLLQESANLGLQISAFSHFITRGRSENRQFSNIFDVS 248
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
EY+ + DL+ DH+ FG E R + +
Sbjct: 249 EYLQLNPDLVPFVESGEIN---AIDHWVRFGISERREFSLS 286
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 50/147 (34%), Gaps = 20/147 (13%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITF 399
E F+D S Y + DL + + + HF G E R F
Sbjct: 148 EAREFSD---------FFSASFYAEANPDLAAITQETLVSKFAHFLGVGQFENRRCSRVF 198
Query: 400 DSYLYLGSYDDLR-----NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
D+ YL D+ + + +A H+IT G E R F EY+ + DL+
Sbjct: 199 DANNYLQLNPDVSQLLQESANLGLQISAFSHFITRGRSENRQFSNIFDVSEYLQLNPDLV 258
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRF 480
DH+ FG E R
Sbjct: 259 PFVESGEIN---AIDHWVRFGISERRE 282
>gi|148238442|ref|YP_001223829.1| Zn-dependent metalloprotease [Synechococcus sp. WH 7803]
gi|147846981|emb|CAK22532.1| Possible Zn-dependent metalloprotease [Synechococcus sp. WH 7803]
Length = 435
Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats.
Identities = 68/399 (17%), Positives = 125/399 (31%), Gaps = 35/399 (8%)
Query: 3 NIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEW 62
N YT IA + D Y + + ++ Q+ R +
Sbjct: 37 NSNAAYTERAIATDGVLDYYLHTPGGAVTVAGGGFGEQTIESVGISAADQDYFRSVVERL 96
Query: 63 SKVVDLTFEETSIHSDIKFI-----------SSNNGYVCTPRYDSRYFMEINFDKADVWR 111
V+DL F E+S + S N + T + + +N+ + +
Sbjct: 97 DAVIDLDFRESSTAAGGDVDLFYDMEIDLGGSGNTLGLATTSGRGGWELFVNYPEVEF-- 154
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+ +HE+GHALGL HP G V G + + + +VM+Y PQ
Sbjct: 155 ----DENYRRYVLIHELGHALGLEHPFEDGDGDTVNGTTDPWASAFPEDTVMAYRNPQ-- 208
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS---GGD 228
S + +D+ A+ +++G + ++ + KD +S G
Sbjct: 209 ----SDNWPEFFTENDLNALIELWGEEVAFVPPSLVVEQPDLKDVSLRLFGAESDLIAGT 264
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D +D + I + G + + + + + + G G+D V G ++V
Sbjct: 265 DAVDWINGSRGSDRIS-GAAGDDFLRGGKDDDVLNGNRGDDWIFGDLGDDTVRGGKGDDV 323
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----ENAIIVYDANEHKQDFLSDVER 343
+ GND G G D + D + D
Sbjct: 324 VNGNVGNDRIYGDLGNDQLRGGQGDDWIDGGDGNDQIWGDRGADLIRLSAGSDLVWD--- 380
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+AD + ++ L + IG
Sbjct: 381 FSYADGDRLQLANERTYTLGSAGGNLQIFTDIGTTTLVG 419
>gi|33866834|ref|NP_898393.1| secreted protease [Synechococcus sp. WH 8102]
gi|33639435|emb|CAE08819.1| possible secreted protease [Synechococcus sp. WH 8102]
Length = 1313
Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats.
Identities = 94/557 (16%), Positives = 173/557 (31%), Gaps = 91/557 (16%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIKFIS 83
Y+I D ++ +F+ P QE ++ +S V L+FE +S +
Sbjct: 95 TYYIGQTGDSISAAGDTFNAVTPKPGEQEAIEASMKAFSDVAQLSFEASSSLSGNTTIAW 154
Query: 84 SNNGYVCTPRYDSRYFMEINFDKA----------DVWRYGIGKGTILSHNALHEIGHALG 133
+ + + + A D + G+ +HE+GHALG
Sbjct: 155 GVSADESIYHGIADFPGDSEATAASGVIIFNEDYDADGGEVESGSYFYLTYIHELGHALG 214
Query: 134 LMHPGSYNGGY--------------PVYGVDNDYENDSFLTSVMSYFMPQD--------- 170
L HP + +++N+S +VM+Y
Sbjct: 215 LAHPHNGGEAGWNSYESALFPGVSEGADSSAGEFDNNSTPWTVMTYNDSSSYLAVSDASG 274
Query: 171 ------SMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQTIY 223
+ GY DI AVQ +YG + + G+ +Y + + + ++I+
Sbjct: 275 QLDDVSPGYQSIDGYLENLGPIDIAAVQYLYGPNHQSNAGDTVYALNEYELNG--YRSIW 332
Query: 224 DSGGDDLLDLTLIGGVKNYIDLN----------TESWSSIGGYEKNMTIAQHT------- 266
D+ G+D +D IDL S I K TIA +
Sbjct: 333 DASGNDTIDAFDSSSSV-VIDLRNATLENEIGGGGFLSKINDEYKGYTIAYDSLTLAGFG 391
Query: 267 ------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
VIE+ GS ND + GN +N+ G+D G++G DT +
Sbjct: 392 DGAYQAVIENARGSFLNDSLQGNDYDNLLEGEGGDDTLIGAAGADTLY--GAEGDDVYTG 449
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + ++D + D +++ I +
Sbjct: 450 GAGGDLFVFDS--GANIINDFDPSPSGDNDDIAIDFDVVDPWVSITGDSLFIYDENSNAS 507
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG---RNP 437
+ +SE + + +VF D G + +
Sbjct: 508 LQLAGKASLYVSE--------AVSDYDFIVDSSVFSDDGATIVEVIDESGWIDHPGFGSD 559
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
F AS+ D+ + F + + + +TF++ + D+
Sbjct: 560 YDFIDRSKFASNIDIYDYF------YSHEMEEWFTGTLPDPTSITFEADN---GWLDVNG 610
Query: 498 VFGSDRGAAARHYITHG 514
FGS + H G
Sbjct: 611 SFGSSAFSPDDHQYLAG 627
>gi|149186560|ref|ZP_01864872.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Erythrobacter sp. SD-21]
gi|148829787|gb|EDL48226.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Erythrobacter sp. SD-21]
Length = 1933
Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats.
Identities = 110/560 (19%), Positives = 175/560 (31%), Gaps = 56/560 (10%)
Query: 17 LLRDQYWSNYFIRYKPDVLTT----HRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE 72
L+ Y+ + Y D T + E + ++ R A+ WS V ++TF+E
Sbjct: 20 LIYGTYYRGTILYYLSDDDATLDAYGNPTIGGWEATNSD-DMFRLAIDRWSAVANITFQE 78
Query: 73 TSIHSD----IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
S S+ ++I S Y + + ++ V +G + LHEI
Sbjct: 79 ASDPSENPDWTEYIVSGQNYGYGAYHYTPGGPGGAYNAYYVNTATNVEGGYGLYTFLHEI 138
Query: 129 GHALGLMHPGSYNGGYPVYGVDN-----DYENDSFLTSVMSYFMPQDSMMDASF--GYCA 181
GHALGL H +G P GV D + L SVM+Y GY A
Sbjct: 139 GHALGLNHTFETDGDGPFPGVSGSNDPGDNNLSTGLYSVMAYVFQNPDYASGYSNIGYAA 198
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
TPM DI A+Q IYGA + + + + I+D G D + L
Sbjct: 199 TPMAFDIAAIQAIYGANMTTATGDDVYYLPPSTGTQAFECIWDVSGTDTISAEL-SDGGT 257
Query: 242 YIDLNTE----------------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
IDL S G TIA VIE+ VGS+ D + GN
Sbjct: 258 TIDLRAATLLNEVGGGGWLSYQDGSSGAGVVYGGYTIANGVVIENAVGSTYADTITGNDE 317
Query: 286 NNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
NV SG+D G G D+ + Y V + + D +
Sbjct: 318 ANVLDGGSGDDTIFGLGGDDSIDGGAGADAMAGGTGDDTYYVDNAGDTVTELADEGTDHV 377
Query: 339 S----------DVERLRFAD--QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+VE L D +++ +A+ + L G D+ +
Sbjct: 378 VTTLATYALTGNVEDLSAGDDSSAYALSGNALDNVITGSANGDSLNGGDGDDILDGGAGA 437
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G D + + + + Y+ E +
Sbjct: 438 DTMAGGAGNDT-YRVDNASDFVTEQAGAGADEVITEVQSYMLSVHVENLTAGETVQAYLL 496
Query: 447 ASHED---LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+++ + ++ + G D ++ Y +D
Sbjct: 497 TGNDENNVITGGSSNDLLVGLGGSDTLVGGAGDDSMLGGTGDDTYYVDDAGDTVSEDADA 556
Query: 504 GAAARHYITHGVKEGRNPDA 523
G H G G N +
Sbjct: 557 GTDTVHTGLGGYTLGANVEN 576
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/498 (11%), Positives = 135/498 (27%), Gaps = 42/498 (8%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
++ + N S + + +D G G ++L
Sbjct: 494 YLLTGNDENNVITGGSSNDLLVGLGGSDTLVGGAGDDSMLGGTGDD----------TYYV 543
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ D D D+ T + Y + + ++ + + + +
Sbjct: 544 DDAGDTVSEDADAGTDTVHTGLGGYTLGANVENLVAYDSQESSYQGNELDNEITSYGSVD 603
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT-----ESWSSIGG 255
+IY + I+ I + + GG+ + + G
Sbjct: 604 YGQADIYGL----GGDDVIRFIAAESATNAYQVNGFGGIGEDTLHGASLVGVAISNYLSG 659
Query: 256 YEKNMTIAQHT---VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N I T I +++G SG+D ++G + +++ +G D G +G DT+
Sbjct: 660 GDNNDVIYGGTAAETINNLIGGSGDDTLVGGNGDDLLDGGTGADDMTGGAGNDTYRVDDA 719
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD--QCIDSVNVKQRSILEYTASYED 370
+ E V + +E L D + + + + +
Sbjct: 720 NDTITELDGEGTDTV-ETTLATYTLGDHLEILTAGDNASAYVLTGNALANTITGSDNEDT 778
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY-------------LGSYDDLRNVFGS 417
+ G D + + D + L L + + +
Sbjct: 779 IDGGEGADTMVGGLGDDTYYVDNRNDEIVEEDLGGTETVHVDNFGYTLADNVENLVAYDT 838
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ + + + + + A +DL+ A + +++ G +
Sbjct: 839 QEASYYGNDLANEITAYTSDQWGYAGLLGYGGDDLLTLHA-PETSITSHYGGYADGGSGD 897
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
+ Y G D + + E L A + L
Sbjct: 898 DIIYGLSAVGYSTRNT---LYGGDDNDQIYGGASSETINEIYGDAGDDLLVGGAGADTLD 954
Query: 538 NAFADAPDLVQAGKDHFS 555
+ AG D+++
Sbjct: 955 GGTGADAMIAGAGDDYYT 972
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 70/493 (14%), Positives = 117/493 (23%), Gaps = 68/493 (13%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ N D D G G I +
Sbjct: 1382 AQSVTGTDGDESFYNIDGNDTVTGGRGNDYYSVTEDGFTI-----VEEDDGGYDMIAFGS 1436
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
VD DY D+ + +V Y + D ++ G + N
Sbjct: 1437 VDFDYAMDANIEAVSYYGGGTVTGTANDDCISG----GDDATLEGGLGDDYYQVQRNTVV 1492
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLD----------LTLIGGVKNYIDLNTESWSSIGGYEK 258
E + ++ +D D L+ + L G I ++ G +
Sbjct: 1493 FEEIGGGTDTVRVYFDYTLSDNLENLVNLGSSSGVVLTGNALANIIEGGAGGDTLHGMDG 1552
Query: 259 NMTIAQHTVIESVVGSS-----------------GNDVVIGNSANNVFFESSGNDVFDGS 301
T+ E S GND + G + ++ +G+D+ DG
Sbjct: 1553 ADTLFADQADEEAFEGSMDTLFGGFGNDILYAVIGNDSLYGGAGFDMLHSGAGDDLLDGG 1612
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G DT Y + + A D L+ +E L + +
Sbjct: 1613 NGNDTANYANAVAGVTVDLLDAAAQDTIG--AGVDTLASIEYLVGSAFADILTGSNDANQ 1670
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + + + IG D+ + D D L G D
Sbjct: 1671 IYGGGAADTVYGGIGNDLLIGEEGNDTLYGQASWDTIRGDAGD----DTLVGGNGGDALL 1726
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
T G + Y + D ++ D L D N +
Sbjct: 1727 GGTGLDTLWGDAGTD------RLYGGNDADTLHGGDDNDLLFGQAGDDVVNGDGGDDLVQ 1780
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
L D V G L ++ LI +
Sbjct: 1781 GNKGNDTLDGGADNDTVNGGA--------------------GNDTLFGGTGNDVLIGGWG 1820
Query: 542 DAPDLVQAGKDHF 554
G D F
Sbjct: 1821 VDTMTGGEGADTF 1833
Score = 60.6 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 85/307 (27%), Gaps = 20/307 (6%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
+ + + D Y + +G
Sbjct: 1587 GNDSLYGGAGFDMLHSGAGDDLLDGGNGNDTANYANAVAGVTVDLLDAAAQDTIGAGVDT 1646
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG-YCATPMVSDIVAVQKIYGA 197
+ Y V D S + + D++ +D + Q +
Sbjct: 1647 LASIEYLVGSAFADILTGSNDANQIYGGGAADTVYGGIGNDLLIGEEGNDTLYGQASWDT 1706
Query: 198 PKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTL--------------IGGVK 240
+G G++ + T++ G D L G
Sbjct: 1707 IRGDAGDDTLVGGNGGDALLGGTGLDTLWGDAGTDRLYGGNDADTLHGGDDNDLLFGQAG 1766
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ + + G + N T+ ++V G +GND + G + N+V G D G
Sbjct: 1767 DDVVNGDGGDDLVQGNKGNDTLDGGADNDTVNGGAGNDTLFGGTGNDVLIGGWGVDTMTG 1826
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
G DTF + + K + II + + E LS ++ + + D+ +
Sbjct: 1827 GEGADTFSFTQSGHSGKFASVADTIIDFSSAEGDLIDLSAIDAI--SGGSDDAFTFIGDA 1884
Query: 361 ILEYTAS 367
TA
Sbjct: 1885 AFSGTAG 1891
Score = 47.1 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+ ++ +IG N+ +G D G G DT++ + Y E +
Sbjct: 1087 LTGNDLDNTIIGERDNDTLDGGAGADELIGGQGDDTYYLDNVGDIVTEYEGEGNDTIVTT 1146
Query: 331 NEHKQDFLSD-VERLRFAD--QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
VE L D +++ +A+ + L G D
Sbjct: 1147 ITTVNLSDDGHVENLTAGDDSGDYALTGNSAVNVITGSANNDTLDGGAGADRLVGGLGDD 1206
Query: 388 EFGLSEGRDI 397
+ + + D+
Sbjct: 1207 TYHVDDANDV 1216
Score = 37.8 bits (86), Expect = 6.3, Method: Composition-based stats.
Identities = 59/480 (12%), Positives = 110/480 (22%), Gaps = 33/480 (6%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
NN + I D G G + ++ G +
Sbjct: 659 GGDNNDVIYGGTAAETINNLIGGSGDDTLVGGNGDDLLDGGTGADDMTGGAGNDTYRVDD 718
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ +D + D+ T++ +Y + + + + + A +
Sbjct: 719 ANDTITELDGE-GTDTVETTLATYTLGDHLEILTAGDNASAY------VLTGNALANTIT 771
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+N E T+ GDD + DL ++ T
Sbjct: 772 GSDN----EDTIDGGEGADTMVGGLGDDTYYVDNRNDEIVEEDL--GGTETVHVDNFGYT 825
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN----DVFDGSSGLDTFFYYAPSYLYK 317
+A + + GN N + + G G D +AP
Sbjct: 826 LADNVENLVAYDTQEASY-YGNDLANEITAYTSDQWGYAGLLGYGGDDLLTLHAPETSIT 884
Query: 318 I------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
I+Y + + + DQ + + + + A + L
Sbjct: 885 SHYGGYADGGSGDDIIYGLSAVGYSTRNTLYGGDDNDQIYGGASSETINEIYGDAGDDLL 944
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+ G D + G D + + G D A Y
Sbjct: 945 VGGAGADTLDGGTGADAMIAGAGDDYY--TVDDALDFVTEEEGEGDDVIHAFVDYTLCAN 1002
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE---EGRFVTFDSYLY 488
E L L + +++ +F E D+
Sbjct: 1003 VEWGIAAEGVTLTGNELANSLYAEGIATLEGGDGDDEYYLDFSGVTVVEEADEGIDTVYV 1062
Query: 489 LGSYDDLRNV----FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
L SY N L+ A ++LI D
Sbjct: 1063 LFSYTLTANTEILVLDWTDSDGTVLTGNDLDNTIIGERDNDTLDGGAGADELIGGQGDDT 1122
>gi|89070671|ref|ZP_01157944.1| possible secreted protease [Oceanicola granulosus HTCC2516]
gi|89043751|gb|EAR49954.1| possible secreted protease [Oceanicola granulosus HTCC2516]
Length = 1409
Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats.
Identities = 90/478 (18%), Positives = 139/478 (29%), Gaps = 56/478 (11%)
Query: 46 ELNPNAQEVARWALGEWSKVVDLTFEETSI----------HSDIKFISSNNGYVCTP-RY 94
++ V DL FE ++D+ S V P
Sbjct: 569 GFTDYQVDLIEGLFSSIETVADLRFEPVDDLRAADLLMVRNADVDAGSEQTETVFQPLAE 628
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-------YPVY 147
M+ + + G + L I L L HP N + Y
Sbjct: 629 GRGLIMDRGDFQPSAEDPWMEPGAWGHVDLLVSILTGLRLDHPHENNILQGLEPGPFGYY 688
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDAS----------FGYCATPMVSDIVAVQKIYGA 197
D + + + MS S DA+ +GY A PM DI A+Q YGA
Sbjct: 689 DELGDADLAQGIYTAMSLNRGLQSYPDATLGSDLPSYSYYGYEAGPMALDIAALQHKYGA 748
Query: 198 PKG-SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID--------LNTE 248
L +++Y + Q +I+D+GG D + +
Sbjct: 749 NTTARLEDDVYVLPDQNAVGTTWTSIWDAGGIDAIAYEGASDAVVDLRAATLDYEHGGGG 808
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S++ G TIA T+IE+ SG+D V GN+A+N+F G+D G G DT
Sbjct: 809 YLSAVEGIAGGYTIAAGTIIENASLGSGDDRVTGNAADNIFSGGDGDDSLRGELGNDTID 868
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
A + ++ + D + LE A
Sbjct: 869 GGAGDDVLDGGDGDDVLSGGDGED-------------------VLTGGLGSDTLEGGAGD 909
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L +G+D + GRDI L + G
Sbjct: 910 DSLFGGLGEDRLDGGDGIDSLVGGAGRDILAGGADADSLTGGLDDDLLDGGGGDDTLNGG 969
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
G D L+ A + L + +G D + F
Sbjct: 970 SGRDSLSGGDGDDVLDGGAEDDVLSGGEGEDVLTGGLGSDALEGGAGADNLFGGLGED 1027
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 58/191 (30%), Gaps = 8/191 (4%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +++ G D LD L GG + + E+ + G + ++
Sbjct: 1153 DRLSGGAGGDSLFGGSGTDRLDGGDGRDALRGGQEADVLYGGEADDRLWGGSGDDSLRGG 1212
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G G+D G S ++ G+D G +G DT + ++
Sbjct: 1213 DGDDEIRGGKGDDRFHGGSGDDRLVGGEGDDRVRGGAGDDTMI--GRNGEDRLKGRNGDD 1270
Query: 326 IVYDANEHKQDFLSDVER-LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++ + + E L+ D + L + L G D
Sbjct: 1271 LLLGGKGDDRLRGGNAEDVLKGGDGDDLLHGGRGDDRLRGGDGEDLLRGGSGTDDLVGGA 1330
Query: 385 HFYEFGLSEGR 395
F L G
Sbjct: 1331 DADSFILKLGD 1341
Score = 81.0 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/379 (12%), Positives = 89/379 (23%), Gaps = 30/379 (7%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+ +D G G + + G+ G +
Sbjct: 988 AEDDVLSGGEGEDVLTGGLGSDALEGGAGADNLFGGLGEDSLDGGDGIDTLVGGAGRDIL 1047
Query: 147 YGVDNDYENDSFLTSVMSYFMPQ-------DSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
G + + + + G + I + G
Sbjct: 1048 AGGADADDLRGGDDDDLLDGGDGDDLVSGGTGADSLTGGLGRDSLAGGIGDDRLSGGDED 1107
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSI 253
L + + + G D L D G + + S
Sbjct: 1108 DVLEGGV--GDDVLAGGTGADILDGGAGRDRLAGGAGDDRLSGGAAADRLSGGAGGDSLF 1165
Query: 254 GG--------YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
GG + + + + G +D + G S ++ G+D G G D
Sbjct: 1166 GGSGTDRLDGGDGRDALRGGQEADVLYGGEADDRLWGGSGDDSLRGGDGDDEIRGGKGDD 1225
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE-RLRFADQCIDSVNVKQRSILEY 364
F + S ++ E V + E RL+ + + K L
Sbjct: 1226 RF--HGGSGDDRLVGGEGDDRVRGGAGDDTMIGRNGEDRLKGRNGDDLLLGGKGDDRLRG 1283
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ + L G D+ + +G D+ DDL +D
Sbjct: 1284 GNAEDVLKGGDGDDLLHGGRGDDRLRGGDGEDLLRGGSG----TDDLVGGADADSFILKL 1339
Query: 425 HYITHGVKEGRNPDAFKAL 443
++ F+
Sbjct: 1340 GDGASHWRDADRIRDFEDG 1358
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/303 (14%), Positives = 69/303 (22%), Gaps = 13/303 (4%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G E + +++ G +G D + G + G D G +G D
Sbjct: 990 DDVLSGGEGEDVLTGGLGSDALEGGAGADNLFGGLGEDSLDGGDGIDTLVGGAGRDILA- 1048
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ ++ + + + L L +
Sbjct: 1049 GGADADDLRGGDDDDLLDGGDGDDLVSGGTGADSLTGGLGRDSLAGGIGDDRLSGGDEDD 1108
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L +G DV GRD L G+ DD + AA R
Sbjct: 1109 VLEGGVGDDVLAGGTGADILDGGAGRD-----RLAGGAGDDRLSG----GAAADRLSGGA 1159
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G L+ + L D ++
Sbjct: 1160 GGDSLFGGSGTDRLDGGDGRDALRGGQEADVLYGGEADDRLWGGSGDDSLRGGDGDDEIR 1219
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
G D R GS G R + + L D L
Sbjct: 1220 GGKGDDRFHGGSGDDRLV---GGEGDDRVRGGAGDDTMIGRNGEDRLKGRNGDDLLLGGK 1276
Query: 550 GKD 552
G D
Sbjct: 1277 GDD 1279
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/256 (12%), Positives = 66/256 (25%), Gaps = 8/256 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + + D G G + A + G
Sbjct: 1102 SGGDEDDVLEGGVGDDVLAGGTGADILDGGAGRDRLAGGAGDDRLSGGAAADRLSGGAGG 1161
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G + G D + + Y D + G + ++
Sbjct: 1162 DSLFGGSGTDRLDGGDGRDALRGGQEADVLYGGEADDRLWGGSGDDSLRGGDGDDEIRGG 1221
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + G + + + GDD + +
Sbjct: 1222 KGDDRFHGG----SGDDRLVGGEGDDRVRGGAGDDTMIGRNGEDRLK----GRNGDDLLL 1273
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + + + + G G+D++ G ++ G D+ G SG D A +
Sbjct: 1274 GGKGDDRLRGGNAEDVLKGGDGDDLLHGGRGDDRLRGGDGEDLLRGGSGTDDLVGGADAD 1333
Query: 315 LYKIYRFENAIIVYDA 330
+ + + A DA
Sbjct: 1334 SFILKLGDGASHWRDA 1349
>gi|238623366|emb|CAS06677.1| alkaline metalloprotease [Pseudomonas sp. Z22b]
Length = 199
Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 72/199 (36%), Gaps = 16/199 (8%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFIS 83
+ F+ ++ N + A A+ W+ V +TF E + D
Sbjct: 1 TYTFLTSASSSTMNKHGISGFSQFNAQQKAQAVLAMQSWADVAKVTFTEKATGGDGHMTF 60
Query: 84 SNN--------GYVCTPRYDSRYFMEINF--DKADVWRYGIGKGTILSHNALHEIGHALG 133
N + P + Y + + + HEIGH LG
Sbjct: 61 GNYSSGQDGAAAFAYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLG 120
Query: 134 LMHPGSYNGGY-PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDI 188
L HPG YN G D Y D+ S+MSY+ ++ + S G Y + P++ DI
Sbjct: 121 LAHPGDYNAGNGNPTYNDATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDI 180
Query: 189 VAVQKIYGAP-KGSLGNNI 206
A+QK+YGA +
Sbjct: 181 AAIQKLYGANYSTRASDTT 199
>gi|119358105|ref|YP_912749.1| hemolysin-type calcium-binding region [Chlorobium phaeobacteroides
DSM 266]
gi|119355454|gb|ABL66325.1| Hemolysin-type calcium-binding region [Chlorobium phaeobacteroides
DSM 266]
Length = 2198
Score = 126 bits (315), Expect = 2e-26, Method: Composition-based stats.
Identities = 82/594 (13%), Positives = 150/594 (25%), Gaps = 37/594 (6%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
S +G V RY++ ++ F +G + + + G L +
Sbjct: 1595 GGSGDGDVIVVRYNADGSPDMTFSDDGFVTTKVGAESSGNGVVVQADGMILVAGSAENSG 1654
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G + + + +F ++ +D + G
Sbjct: 1655 DGEQDFLLIRYNADGTFNDTLNGTDGNDSLNGFEGDDLLLGFGGNDTLIGGAGNDTLDGG 1714
Query: 202 LGNN--IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G + I + + D+ +DL L + N
Sbjct: 1715 TGADEMTGGIGDDTYVVNYSLDVVTEHADEGIDLVQSSTGWT---LGANVENLELTGTAN 1771
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + G+SG + + G N+ +G D G G DT+ L +
Sbjct: 1772 TRGTGNELDNRITGNSGRNTLTGGDGNDTLDGGTGADSMAGGIGDDTYVVNYS--LDVVT 1829
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQD 378
+ I + ++VE L + + + L G D
Sbjct: 1830 EHADEGIDLVQSSTGWTLGANVEHLELTGTANARGTGNDLDNRITGNSGRNTLTGGDGND 1889
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ G D Y G D ++ + E
Sbjct: 1890 TLDGGTGADSMAGGIGDDTY--VVNYSLDVVTENADEGIDLVQSSTGWTLGANVEHLELT 1947
Query: 439 AFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD-- 494
+ D + + G D + Y+ +Y
Sbjct: 1948 GTANARGTGNDLDNCITGNSGKNTLIGGAGNDTLDGGSGADSMVGGIGDDTYVVNYSLDV 2007
Query: 495 -----------LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED---LINAF 540
+++ G GA H G R I + L
Sbjct: 2008 VTENADEGIDLVQSSTGWTLGANVEHLELTGTANTR-GTGNDLDNVITGNSGKNYLAGEE 2066
Query: 541 ADAPDLVQAGKD-HFSNFGYEE-----GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
+ L AG D + G +E GR + + + + +D +A
Sbjct: 2067 GEDILLGGAGADTLYGGMGADELTGGTGRDVFLYNNSSESGITEGAWDVITDFTAGFDRL 2126
Query: 595 ITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
G+ GI+G Q S L L FD LY + GD +
Sbjct: 2127 DLSGID--ANTGIAGNQSFSSDILGSGDAFSEAGQLRFDSGSGVLYGNTDGDAD 2178
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 56/385 (14%), Positives = 120/385 (31%), Gaps = 27/385 (7%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDI-TELNPNAQEVARWALGEWSKVVDLTFEE 72
+ L ++ D S D+ TE ++ + + W+ ++ E
Sbjct: 1797 GNDTLDGGTGADSMAGGIGDDTYVVNYSLDVVTEHADEGIDLVQSS-TGWTLGANVEHLE 1855
Query: 73 TSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ ++ + ++ N T AD GIG T + + +L
Sbjct: 1856 LTGTANARGTGNDLDNRITGNSGRNTLTGGDGNDTLDGGTGADSMAGGIGDDTYVVNYSL 1915
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+ + G + ++ + + D+ + + G
Sbjct: 1916 DVVTENADEGIDLVQSSTGWTLGANVEHLELTGTANARGTGNDLDNCITGNSGKNTLIGG 1975
Query: 186 SDIVAVQKIYGAPK--GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI---GGVK 240
+ + GA G +G++ Y + + T G DL+ + G
Sbjct: 1976 AGNDTLDGGSGADSMVGGIGDDTYVVNYSLD----VVTENADEGIDLVQSSTGWTLGANV 2031
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+++L + + G + + I ++ + G G D+++G + + + G D G
Sbjct: 2032 EHLELTGTANTRGTGNDLDNVITGNSGKNYLAGEEGEDILLGGAGADTLYGGMGADELTG 2091
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+G D F Y S A + DF + +RL + ++ +S
Sbjct: 2092 GTGRDVFLYNNSSESGITEG---------AWDVITDFTAGFDRLDLSGIDANTGIAGNQS 2142
Query: 361 ILEYTASYEDLIQVIGQDVFESMKH 385
D GQ F+S
Sbjct: 2143 FSSDILGSGDAFSEAGQLRFDSGSG 2167
>gi|307309503|ref|ZP_07589159.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
gi|306900088|gb|EFN30708.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
Length = 388
Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats.
Identities = 81/356 (22%), Positives = 121/356 (33%), Gaps = 74/356 (20%)
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
G H LHE+GHALGL H + + DS SV+SY +
Sbjct: 17 PVAGNYAWHTHLHELGHALGLKHGHESDVYGAT-----PAQYDSIEYSVLSYRAYVGADT 71
Query: 174 DASFGY-----CATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEV-------------QQK 214
S+ Y T M+ DI A+Q++YGA + GN +YK
Sbjct: 72 GGSYSYEQFGAPQTFMMGDIAALQEMYGADFTTNSGNTVYKWTPGSGATFVNGAVGISPG 131
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--------IGGYEKNMTIAQH- 265
+ TI+D GG D DLT +DL S+ + G A +
Sbjct: 132 ANRIFATIWDGGGKDTYDLTAYTTALK-VDLRPGKASTFSIDQLAWLDGGPNGGFAAGNV 190
Query: 266 -----------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
++IE+V G S D + GN A NV + +GND +G +G D Y S
Sbjct: 191 FNALLYRGDTRSLIENVKGGSAGDAITGNQATNVLWGYAGNDTLNGDTGND--VLYGGSG 248
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
++Y + ++ ++ A + L
Sbjct: 249 SDRLYGGKGNDQIF--------------------------GETGNDLIYAGAGADRLNGG 282
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G D F + GRD FD DL + + A + ++ G
Sbjct: 283 SGTDSFVFKALSDSTAAASGRDTIFDFTPKSDRI-DLSAIDANTSIAGDQAFLFAG 337
>gi|330950563|gb|EGH50823.1| hemolysin-type calcium-binding region:peptidase M10A and M12B,
matrixin and adamalysin [Pseudomonas syringae Cit 7]
Length = 304
Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats.
Identities = 71/298 (23%), Positives = 109/298 (36%), Gaps = 50/298 (16%)
Query: 6 PVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
P + + HL + ++ + + D L A+ AL WS V
Sbjct: 29 PFWLGDSSGTHLTYSFHRADSVYAT---DYSRSQEPGDAYSLTDAQAAAAKSALDAWSAV 85
Query: 66 VDLTFEETSIH----SDIKFI------SSNNGYVCTPRY---DSRYFMEINFDKADVWRY 112
D+ F E DI+F + G P ++ N + AD
Sbjct: 86 ADIKFTEVQDTPDNVGDIRFGGFKGLQGTEFGQAYAPGTLGRSGDVWIGPNVNAAD---- 141
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
KGT +HE GHALGL H + V D + + ++MSY
Sbjct: 142 -PAKGTDDYLTFMHETGHALGLKHSFEGSQYNDVL---LDAKFEDARYTIMSYTNNYS-- 195
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
TPM+ D+ A+Q IYGA G+++YK +TI+D+GG D +
Sbjct: 196 -----FKPTTPMLLDVAAMQFIYGANTHYHTGDDVYKW---APGQSVFETIWDAGGKDTI 247
Query: 232 DLTLIGGVKNYIDLNTESWSSIGG--------------YEKNMTIAQHTVIESVVGSS 275
D + I+LN +S+IG + IA IE+ +GS+
Sbjct: 248 DASNQ-EASVKINLNEGEFSTIGKAFLDYNANPDAPTLMNSGLAIAYGAHIENAIGSA 304
>gi|85372717|gb|ABC70165.1| cold adapted lipase [Janthinobacterium sp. PI12]
Length = 260
Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 13/206 (6%)
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQ-------- 213
MSY+ Q++ D Y + P++ DI A+QK+YGA G+ +Y
Sbjct: 1 MSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSAT 60
Query: 214 -KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
S + +++D+GG+D LD + + I+LN ++ S +GG + N++IA +E+ +
Sbjct: 61 SSSSKLVFSVWDAGGNDTLDFSGFSQNQK-INLNEKALSDVGGLKGNVSIAAGVTVENAI 119
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G SG+D++IGN NV +GND+ G G D + + + A A +
Sbjct: 120 GGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQL--WGGAGADTFVYGDIAESSAAAPD 177
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQ 358
+DF+S +++ +
Sbjct: 178 TLRDFVSGQDKIDLSGLDAFVNGGLV 203
>gi|116250562|ref|YP_766400.1| rhizobiocin [Rhizobium leguminosarum bv. viciae 3841]
gi|115255210|emb|CAK06284.1| putative calcium binding RTX Zn-metalloprotease [Rhizobium
leguminosarum bv. viciae 3841]
Length = 1585
Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats.
Identities = 99/580 (17%), Positives = 170/580 (29%), Gaps = 72/580 (12%)
Query: 61 EWSKVVDLTFEE-TSIHSDIKFISSN---NGYVCTP---RYDSRYFMEINFDKADVWRYG 113
+ F ++ + ++F S+ + TP + + + +
Sbjct: 81 SVEGFTNANFVAGSAGTATVRFAQSSLPPTAWAYTPIIGGHGGDVWFGTEYAGTEDDLRF 140
Query: 114 IGKGTILSHNALHEIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G SH HE+GHALGL H YN V D + +T
Sbjct: 141 PRFGNYASHTLAHELGHALGLKHAQEGYNLNLTVVPGAYDSLEYTIMTYRTFVGDNLYGY 200
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK-------------DSPF 218
G T M+ DI A+Q++YGA + G+ +YK Q +
Sbjct: 201 KYEHDGAPQTFMMLDIAALQEMYGADYTTNSGDTVYKWNPNQGITYVNGVAAITPAANRI 260
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS--------SIGGYEKNMTIAQH----- 265
TI+D GG D DL+ IDL +S +GG N +
Sbjct: 261 FATIWDGGGIDTYDLSAYTTALK-IDLRAGGYSVFSQSQLADLGGGPNNGYARGNVFNAL 319
Query: 266 -------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------- 307
++IE+V SGND ++GN A+N + ++GND G SG DT
Sbjct: 320 LYHDNVASLIENVRAGSGNDTLVGNEADNALWGNAGNDTLTGDSGNDTLDGGAGIDKMSG 379
Query: 308 -----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSI 361
Y + + ++VE L + ++
Sbjct: 380 GMGNDVYIVDDANDAVIENVDEGTDTVRTTGSYTLSTNVENLVYIGTFGFSGTGNTAANV 439
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS---YDDLRNVFGSD 418
+ + L G D + + + D+ ++ D +
Sbjct: 440 ITGGTGIDWLDGKAGADTLIGGAGNDTYIVDDLGDVVVEAADSGADTIRTDLAAYSLADN 499
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
++ G G + + L + G D + G +
Sbjct: 500 ANVEDLYFTGSGNSTGVGNSLDNIITGGTGDDTLSGGAGNDTLSGGWGDDSLAGGGGYDI 559
Query: 479 RFVTFDSYLYLGSYDDLRNVFGS-----DRGAAARHYITHGVKE--GRNPDAFKALEYIA 531
V D + + D+ + + A + I G G + + A
Sbjct: 560 YVVYGDGDTVIENADEGIDTVKTYLASYTLSANVENLINFGRIAFIGTGNNLNNTITGGA 619
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
+ L D AG D G + +
Sbjct: 620 VIDILSGGAGDDTLDGGAGAD--RLIGGTGNDTYIVDNAS 657
Score = 98.7 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 64/456 (14%), Positives = 114/456 (25%), Gaps = 39/456 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ + I E + R AL +S + E + FI + N
Sbjct: 1077 DIYVVDSATDVINEAVSAGTDEIRTALAAYSIAALINVENLTYTGSASFIGTGNALANII 1136
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
AD G G T + N + A D
Sbjct: 1137 TGGIGNDTLNGGGGADTLIGGAGDDTYIVDNIGDLVTEA-------------------AD 1177
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ SY + D + G A + + GA +L +
Sbjct: 1178 AGTDTVRTTLASYTLGSDVENLTNIGTAAFTGTGNDLDNVITGGAAIDTLSGGV--GNDT 1235
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIG---------------GVKNYIDLNTESWSSIGGYE 257
+ G+D+ + G + L +
Sbjct: 1236 LNGGAGADRLIGGEGNDIYIVDNAGDVVTEAANEGIDTVRTNLSAHTLAANVENLTYIGT 1295
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
T A + + ++G D ++G + N+ +G D G +G D + + +
Sbjct: 1296 AAFTGAGNLLDNIIIGGVAADKLMGAAGNDTLIGGAGADTMLGGTGDDIYVVDIATDIVF 1355
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIG 376
E V A ++VE L + + + A + L G
Sbjct: 1356 ENANEGTDTVRTA-LVSYTLGNNVENLTYTGSASFTGAGNALANTITGGAGNDVLNGGTG 1414
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYL-YLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
D + + DI + + + YI G G
Sbjct: 1415 ADSLIGGAGNDTYIVDNAGDIVTEVANEGTDTVRANLASYTLAANVENLTYIGTGPFAGE 1474
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ + L D D F
Sbjct: 1475 GNALNNVIVGGSGFNALTGGAGDDTLTGGAAADVFI 1510
Score = 96.4 bits (238), Expect = 2e-17, Method: Composition-based stats.
Identities = 61/435 (14%), Positives = 121/435 (27%), Gaps = 13/435 (2%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKA 107
+ + R L +S + E + F + N + T + A
Sbjct: 826 DSAGTDEIRTVLVAFSIAALVNVENLTYTRSANFTGTGNAFANTITGGAGNDTLDGGAGA 885
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
D G G T + N + A G+ + + ++ + F
Sbjct: 886 DSLIGGEGDDTYIVDNIGDLVTEA---ADAGTDTVRTTLASYTLGSDLENLAYIGTAAFA 942
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPK--GSLGNNIYKIEVQQKDSPFIQTIYDS 225
+ +D + A + D A GA G GN+ Y ++ +
Sbjct: 943 GTGNSLDNTIRGAAGADILDGGA-----GADSLIGGAGNDTYIVDNAGDLVTEAAEVGID 997
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
L +G + + + G TI +++ G +GND +IG +
Sbjct: 998 TVRTTLAAYTLGANVENLLYTGSANFTGTGNALANTITGGVGNDTLDGGTGNDTLIGGAG 1057
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERL 344
N+ G+D G +G D + + + + + A + L +VE L
Sbjct: 1058 NDTLIGGGGSDTMSGGTGDDIYVVDSATDVINEAVSAGTDEIRTALAAYSIAALINVENL 1117
Query: 345 RFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL-SEGRDITFDSY 402
+ +I+ + L G D + + + G +T +
Sbjct: 1118 TYTGSASFIGTGNALANIITGGIGNDTLNGGGGADTLIGGAGDDTYIVDNIGDLVTEAAD 1177
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
+ + I G D + A+ + L +
Sbjct: 1178 AGTDTVRTTLASYTLGSDVENLTNIGTAAFTGTGNDLDNVITGGAAIDTLSGGVGNDTLN 1237
Query: 463 VQVGKDHFSNFGCEE 477
G D +
Sbjct: 1238 GGAGADRLIGGEGND 1252
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 78/559 (13%), Positives = 141/559 (25%), Gaps = 61/559 (10%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + +TE + R L ++ DL E + F + N T
Sbjct: 895 DTYIVDNIGDLVTEAADAGTDTVRTTLASYTLGSDL--ENLAYIGTAAFAGTGNSLDNTI 952
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
R + + AD G G T + + + +
Sbjct: 953 RGAAGADILDGGAGADSLIGGAGNDTYIV-------------------DNAGDLVTEAAE 993
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ +Y + + G + +A G +L
Sbjct: 994 VGIDTVRTTLAAYTLGANVENLLYTGSANFTGTGNALANTITGGVGNDTLDGGT--GNDT 1051
Query: 213 QKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
T+ GG D + + + + I +IA
Sbjct: 1052 LIGGAGNDTLIGGGGSDTMSGGTGDDIYVVDSATDVINEAVSAGTDEIRTALAAYSIAAL 1111
Query: 266 TVIESVVGSSGNDVV-IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+E++ + + GN+ N+ GND +G G DT A Y +
Sbjct: 1112 INVENLTYTGSASFIGTGNALANIITGGIGNDTLNGGGGADTLIGGAGDDTYIVDNI--G 1169
Query: 325 IIVYDANEHKQDFL----------SDVERLR-FADQCIDSVNVKQRSILEYTASYEDLIQ 373
+V +A + D + SDVE L +++ A+ + L
Sbjct: 1170 DLVTEAADAGTDTVRTTLASYTLGSDVENLTNIGTAAFTGTGNDLDNVITGGAAIDTLSG 1229
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+G D EG DI + + R + H + V+
Sbjct: 1230 GVGNDTLNGGAGADRLIGGEGNDIYIVDNAGDVVTEAANEGIDTVRTNLSAHTLAANVEN 1289
Query: 434 G-RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
A +I A + G D + +Y+
Sbjct: 1290 LTYIGTAAFTGAGNLLDNIIIGGVAADKLMGAAGNDTLIGGAGADTMLGGTGDDIYVVDI 1349
Query: 493 D-----DLRNVFGSDRGAAARHYITHGVKEGRNPDA-----------FKALEYIASHEDL 536
+ N A Y E + A ++ L
Sbjct: 1350 ATDIVFENANEGTDTVRTALVSYTLGNNVENLTYTGSASFTGAGNALANTITGGAGNDVL 1409
Query: 537 INAFADAPDLVQAGKDHFS 555
+ AG D +
Sbjct: 1410 NGGTGADSLIGGAGNDTYI 1428
Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 71/532 (13%), Positives = 132/532 (24%), Gaps = 25/532 (4%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D L + E + + R L +S + E+ N
Sbjct: 465 DTYIVDDLGDVVVEAADSGADTIRTDLAAYSLADNANVEDLYFTGSGNSTGVGNSLDNII 524
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D G G ++ G G + D
Sbjct: 525 TGGTGDDTLSGGAGNDTLSGGWGDDSLAGG----------GGYDIYVVYGDGDTVIENAD 574
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T + SY + + +FG A + + GA L +
Sbjct: 575 EGIDTVKTYLASYTLSANVENLINFGRIAFIGTGNNLNNTITGGAVIDILSGGA--GDDT 632
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGG------VKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ G+D + + + T S + G
Sbjct: 633 LDGGAGADRLIGGTGNDTYIVDNASDVVTENANEGIDTVRTTLASYMLGSNVENLTYMGA 692
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V + G+ + + G ++ + +G D+ G +G DT+ + + E A +
Sbjct: 693 VAFTGTGNDLANTIRGAASADTLDGKAGADILIGGAGDDTYIVDNLADVVTERPNEGADL 752
Query: 327 VYDANEHKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
V ++VE+L F + + A + L G D +
Sbjct: 753 VKTTLS-SYTLTNNVEKLTFIGTGDFAGTGNGLANTINGGAGNDTLDGGAGNDALDGGAG 811
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH--YITHGVKEGRNPDAFKAL 443
+ L D+ DS + F + Y G +
Sbjct: 812 NDIYVLDSASDVIKDSAG-TDEIRTVLVAFSIAALVNVENLTYTRSANFTGTGNAFANTI 870
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
A ++ L + G D + G VT + + +
Sbjct: 871 TGGAGNDTLDGGAGADSLIGGEGDDTYI--VDNIGDLVTEAADAGTDTVRTTLASYTLGS 928
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
YI G + A + L + AG D +
Sbjct: 929 DLENLAYIGTAAFAGTGNSLDNTIRGAAGADILDGGAGADSLIGGAGNDTYI 980
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 73/562 (12%), Positives = 148/562 (26%), Gaps = 37/562 (6%)
Query: 13 IADHLLRDQYWSNYFIRYK-PDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
+ L + + D+ + + E + + L ++ ++ E
Sbjct: 537 AGNDTLSGGWGDDSLAGGGGYDIYVVYGDGDTVIENADEGIDTVKTYLASYTLSANV--E 594
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
I FI + N T + + D G G ++
Sbjct: 595 NLINFGRIAFIGTGNNLNNTITGGAVIDILSGGAGDDTLDGGAGADRLIGGTGND----- 649
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+ V + + D+ T++ SY + + G A + +A
Sbjct: 650 -----TYIVDNASDVVTENANEGIDTVRTTLASYMLGSNVENLTYMGAVAFTGTGNDLAN 704
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
GA + ++ + I D+ D + + G L++ + +
Sbjct: 705 TIR-GAASADTLDGKAGADILIGGAGDDTYIVDNLADVVTERPNEGADLVKTTLSSYTLT 763
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + T + G+ + + G + N+ +GND DG +G D + +
Sbjct: 764 NNVEKLTFI----GTGDFAGTGNGLANTINGGAGNDTLDGGAGNDALDGGAGNDIYVLDS 819
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYED 370
S + K + I L +VE L + + + A +
Sbjct: 820 ASDVIKDSAGTD-EIRTVLVAFSIAALVNVENLTYTRSANFTGTGNAFANTITGGAGNDT 878
Query: 371 LIQVIGQDVFESMKHFYEFGL-SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G D + + + + G +T + + + YI
Sbjct: 879 LDGGAGADSLIGGEGDDTYIVDNIGDLVTEAADAGTDTVRTTLASYTLGSDLENLAYIGT 938
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC----EEGRFVTFDS 485
G + A + L + G D + E V D+
Sbjct: 939 AAFAGTGNSLDNTIRGAAGADILDGGAGADSLIGGAGNDTYIVDNAGDLVTEAAEVGIDT 998
Query: 486 YLYLGS------------YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
+ Y N G+ A G L A +
Sbjct: 999 VRTTLAAYTLGANVENLLYTGSANFTGTGNALANTITGGVGNDTLDGGTGNDTLIGGAGN 1058
Query: 534 EDLINAFADAPDLVQAGKDHFS 555
+ LI G D +
Sbjct: 1059 DTLIGGGGSDTMSGGTGDDIYV 1080
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 59/470 (12%), Positives = 114/470 (24%), Gaps = 22/470 (4%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
D G T+ + ++ +G + V ++ + +
Sbjct: 352 GNAGNDTLTGDSGNDTLDGGAGIDKMSGGMGNDVYIVDDANDAVIENVDEGT--DTVRTT 409
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI 222
SY + + G + A G L + + + I
Sbjct: 410 GSYTLSTNVENLVYIGTFGFSGTGNTAANVITGGTGIDWL-DGKAGADTLIGGAGNDTYI 468
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESW-------SSIGGYEKNMTIAQHTVIESVVGSS 275
D GD +++ G DL S N T +++ + G +
Sbjct: 469 VDDLGDVVVEAADSGADTIRTDLAAYSLADNANVEDLYFTGSGNSTGVGNSLDNIITGGT 528
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D + G + N+ G+D G G D + Y E V
Sbjct: 529 GDDTLSGGAGNDTLSGGWGDDSLAGGGGYDIYVVYGDGDTVIENADEGIDTVKTYLASYT 588
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ + F + + A + L G D + G
Sbjct: 589 LSANVENLINFGRIAFIGTGNNLNNTITGGAVIDILSGGAGDDTLDGGAGADRLIGGTGN 648
Query: 396 DITF----------DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
D ++ + + + Y+ G D +
Sbjct: 649 DTYIVDNASDVVTENANEGIDTVRTTLASYMLGSNVENLTYMGAVAFTGTGNDLANTIRG 708
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
AS + L + G D + + VT + +
Sbjct: 709 AASADTLDGKAGADILIGGAGDDTYIVDNLAD--VVTERPNEGADLVKTTLSSYTLTNNV 766
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+I G G + A ++ L + AG D +
Sbjct: 767 EKLTFIGTGDFAGTGNGLANTINGGAGNDTLDGGAGNDALDGGAGNDIYV 816
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/351 (13%), Positives = 97/351 (27%), Gaps = 33/351 (9%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE + R L + ++ E + F + N
Sbjct: 1252 DIYIVDNAGDVVTEAANEGIDTVRTNLSAHTLAANV--ENLTYIGTAAFTGAGNLLDNII 1309
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D G G T+L + + + +
Sbjct: 1310 IGGVAADKLMGAAGNDTLIGGAGADTMLGGTGDDI----------YVVDIATDIVFENAN 1359
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T+++SY + + G + + +A GA
Sbjct: 1360 EGTDTVRTALVSYTLGNNVENLTYTGSASFTGAGNALANTITGGA-----------GNDV 1408
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
++ G+D + G + + E ++ + T+A + + +
Sbjct: 1409 LNGGTGADSLIGGAGNDTYIVDNAGDIVTEV--ANEGTDTVRANLASYTLAANVENLTYI 1466
Query: 273 GS--------SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G+ + N+V++G S N +G+D G + D F Y I F
Sbjct: 1467 GTGPFAGEGNALNNVIVGGSGFNALTGGAGDDTLTGGAAADVFIYSLNWGHDTITNFVAT 1526
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+D +D E L A + V I + +
Sbjct: 1527 GSAHDTIRIDHSIFADWESLFAASSQYGNDTVVTADIDNTIVLRNVALTSL 1577
>gi|16264320|ref|NP_437112.1| putative secreted calcium-binding protein [Sinorhizobium meliloti
1021]
gi|15140457|emb|CAC48972.1| putative secreted calcium-binding protein [Sinorhizobium meliloti
1021]
Length = 559
Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats.
Identities = 56/396 (14%), Positives = 110/396 (27%), Gaps = 29/396 (7%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------------FYYAPSYL 315
+++ GS+G+D + G+ N+V + G+D G +G DT+ Y +P
Sbjct: 152 DTINGSAGHDNLSGHFGNDVLNGNGGDDFITGGNGDDTYDGGTGHDILSFQDAYGSPLAT 211
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ V D + + E R + +
Sbjct: 212 NGVSLNTATGTVVDQFGFSE-TFQNFEEYRGTQFADKMIGSSANETFMGLGGRDTFDGWT 270
Query: 376 GQDVFESMKHFYEFGLSEGRDITF---DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D+ + +FG + G + + G D L ++ + +
Sbjct: 271 GTDLVRYDRD-AQFGGTLGVKVDLAAGTAKDGFGREDTLTSIEDVRGTDFDDSIVGNWAA 329
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
A K + D + + + G + +
Sbjct: 330 NFLRGFAGKDWINGGTGSDTMRGGKGNDTYTVDRPGDIVDENADSGAGIDTIRSNISFNL 389
Query: 493 DDLRNVFGSDRGAAAR-HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
+ V GS + +G G +L + + L D G
Sbjct: 390 GNTAAVKGSVENLVLTGTWNVNGAGNGL----NNSLSGNSGNNSLNGGAGDDVLNGDLGN 445
Query: 552 DHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
D G + FN L + D F G ++ +Q
Sbjct: 446 D--ILTGSVGLDTFRFNTALDEATNVDTVTDFIVADDTIQLQGSIFSAISG-TGTLTDIQ 502
Query: 612 FKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
F + + + A+ + +D +L+ D G+G
Sbjct: 503 FVANA---TGAAETAENRIIYDIDTGELFYDSDGNG 535
Score = 117 bits (292), Expect = 8e-24, Method: Composition-based stats.
Identities = 58/402 (14%), Positives = 108/402 (26%), Gaps = 29/402 (7%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----FYYAPSYL 315
TI +++ G GNDV+ GN ++ +G+D +DG +G D Y +P
Sbjct: 152 DTINGSAGHDNLSGHFGNDVLNGNGGDDFITGGNGDDTYDGGTGHDILSFQDAYGSPLAT 211
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ V D + + E R + +
Sbjct: 212 NGVSLNTATGTVVDQFGFSE-TFQNFEEYRGTQFADKMIGSSANETFMGLGGRDTFDGWT 270
Query: 376 GQDVFESMKHFYEFGLSEGRDITF---DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D+ + +FG + G + + G D L ++ + +
Sbjct: 271 GTDLVRYDRD-AQFGGTLGVKVDLAAGTAKDGFGREDTLTSIEDVRGTDFDDSIVGNWAA 329
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
A K + D + + + G + +
Sbjct: 330 NFLRGFAGKDWINGGTGSDTMRGGKGNDTYTVDRPGDIVDENADSGAGIDTIRSNISFNL 389
Query: 493 DDLRNVFGSDRGAAAR-HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
+ V GS + +G G +L + + L D G
Sbjct: 390 GNTAAVKGSVENLVLTGTWNVNGAGNGL----NNSLSGNSGNNSLNGGAGDDVLNGDLGN 445
Query: 552 DHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
D G + FN L + D F G ++ +Q
Sbjct: 446 D--ILTGSVGLDTFRFNTALDEATNVDTVTDFIVADDTIQLQGSIFSAISG-TGTLTDIQ 502
Query: 612 FKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSD 653
F + + + A+ + +D +YDSD
Sbjct: 503 FVANA---TGAAETAENRIIYDIDTG---------ELFYDSD 532
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 40/312 (12%), Positives = 89/312 (28%), Gaps = 13/312 (4%)
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
+ S + D + G + + G LG+ + +
Sbjct: 244 FADKMIGSSANETFMGLGGRDTFDGWTGTDLVRYDR-DAQFGGTLGVKVDLAAGTAKDGF 302
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
G ++ + + V + + + + D + G+ G
Sbjct: 303 GREDTL---TSIEDVRGTDFDDSIVGNWAANFLRGFAGKDW--INGGTGSDTMRGGKGND 357
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
V + + G D + + + N + + + N+ A + +
Sbjct: 358 TYTVDRPGDIVDENADSGAGIDTIRSNISFNLGNTAAVKGSVENLVLTGTWNVNGAGNGL 417
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
S+ G+SGN+ + G + ++V GND+ GS GLDTF + +
Sbjct: 418 NNSLSGNSGNNSLNGGAGDDVLNGDLGNDILTGSVGLDTFRFNTALDEATNVDT---VTD 474
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + + + + + + E I D+ +
Sbjct: 475 FIVADDTIQLQGSIFSAISGTGTLTDIQFVANAT----GAAETAENRIIYDIDTGELFYD 530
Query: 388 EFGLSEGRDITF 399
G G + F
Sbjct: 531 SDGNGGGGAVHF 542
>gi|294013472|ref|YP_003546932.1| putative Ca2+-binding hemolysin [Sphingobium japonicum UT26S]
gi|292676802|dbj|BAI98320.1| putative Ca2+-binding hemolysin [Sphingobium japonicum UT26S]
Length = 1245
Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats.
Identities = 66/428 (15%), Positives = 126/428 (29%), Gaps = 30/428 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY- 310
+I G N TI+ T + + ++ ND + + N+V +G D DG +G D+F+
Sbjct: 803 TITGSSGNNTISPTTAVLAYQTTALNDTIYALAGNDVIDGGAGADYMDGGAGNDSFYVDT 862
Query: 311 -----APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEY 364
++ ++VE+L I+ + + + +
Sbjct: 863 WSDDGFAGNDDQVIELAGGGSDLVYASVSYRLAANVEKLTLTGAAAINGMGNELTNTITG 922
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGS--- 417
+ L +G D+ M + D F D L G DD +
Sbjct: 923 NDAANMLSGGLGADILYGMGGADALDGGDDNDTLFGGDGDDMLVGGLGDDYLDGGAGADS 982
Query: 418 -DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
G YI + N + +A E A + + G +
Sbjct: 983 MTGGLGNDSYIVDSWSDDGNSANDDLIVELA-GEGTDQVSASVSYKMAAEIEKLVLTGTD 1041
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA-------RHYITHGVKEGRNPDAFKALEY 529
+ D + ++G R Y G L+
Sbjct: 1042 SIDGIGNDIANTMTGNSGNNGLWGGLGNDTLLGNGGDDRLYGEDGQDSLDGGAGNDLLDG 1101
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF---NPDLYLTSYDDLWNVFGSD 586
A+ + L + AGKD + G E F + L SYD + + +
Sbjct: 1102 GAAGDTLKGGAGSDMLIGGAGKD--TLTGGAEADVFIFNRGDTTLNTASYDRITDFKAIE 1159
Query: 587 RSAAAQHYITHGM--KEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYF 644
++ + + I+ F + + + ++ ++ D
Sbjct: 1160 GDRIDLDFLNGSLPAADYAERTIATNNFADALAAANTTAGVNHVAFVAGTTDGWIFYDAN 1219
Query: 645 GDGNYYDS 652
GDG + S
Sbjct: 1220 GDGAFDQS 1227
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 4/162 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + G+D+L N + G + + T +
Sbjct: 221 DDILYGQAGGDNMSGGSGNDILHGDDADTNSNDTLNGDAGNDQLYGGAGSDELYGGTGDD 280
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G SGND + G + N+ +GNDV DGS+ +DT + Y + V
Sbjct: 281 LLDGGSGNDYMHGGAGNDTILAGAGNDVIDGSADVDTLVFSGNRMDYVFTLQADGSYVAV 340
Query: 330 ----ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + +VE +FAD S + ++
Sbjct: 341 DQRAGSPEGSKTIRNVEYFQFADMTTPSTALNAPPVITSNGG 382
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 80/280 (28%), Gaps = 17/280 (6%)
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
G D S L+ + Y S SF + D + + G Y
Sbjct: 74 GTGTDVIYGSNLSDAIFYNNGVISGGFGSFDNIEQFWLGDGDDIIDL---TAHGAGGIDY 130
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-- 265
+V + + G D L G N I +I G + +
Sbjct: 131 AKDVLVQAGLGNDIVIGGAGKDNL----QGDGGNDIIFGWRGSDTIAGGAGDDLLYGDDL 186
Query: 266 -----TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ +++ G +GND++ G ++ +D+ G +G D + + +
Sbjct: 187 GFNNISGDDTIDGGTGNDILYGGRGSDRMTGGDDDDILYGQAGGDNMSGGSGNDILHGDD 246
Query: 321 FENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + D L + + L + A + ++ G
Sbjct: 247 ADTNSNDTLNGDAGNDQLYGGAGSDELYGGTGDDLLDGGSGNDYMHGGAGNDTILAGAGN 306
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
DV + S R + GSY + GS
Sbjct: 307 DVIDGSADVDTLVFSGNRMDYVFTLQADGSYVAVDQRAGS 346
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/292 (11%), Positives = 77/292 (26%), Gaps = 20/292 (6%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+Y + + D + + +D ++ G
Sbjct: 828 NDTIYALAGNDVIDGGAGADYMDGGAGNDSFYVDTWSDDGFAGNDDQVIELAGGGSDLVY 887
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ Y++ + +G + L T+ G + + G +
Sbjct: 888 ASVSYRLAANVEKLTLTGAAAINGMGNELTNTITGNDAANMLSGGLGADILYGMGGADAL 947
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA------PSYLY 316
+++ G G+D+++G ++ +G D G G D++ + +
Sbjct: 948 DGGDDNDTLFGGDGDDMLVGGLGDDYLDGGAGADSMTGGLGNDSYIVDSWSDDGNSANDD 1007
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFA----------DQCIDSVNVKQRSILEYTA 366
I + +++E+L D + L
Sbjct: 1008 LIVELAGEGTDQVSASVSYKMAAEIEKLVLTGTDSIDGIGNDIANTMTGNSGNNGLWGGL 1067
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ L+ G D G D+ + D L+ GSD
Sbjct: 1068 GNDTLLGNGGDDRLYGEDGQDSLDGGAGNDLL----DGGAAGDTLKGGAGSD 1115
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 70/280 (25%), Gaps = 38/280 (13%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI---GGVKNYIDLNTESWSSIGGYEKN 259
D+ F SGG D G + IDL I Y K+
Sbjct: 75 TGTDVIYGSNLSDAIFYNNGVISGGFGSFDNIEQFWLGDGDDIIDLTAHGAGGI-DYAKD 133
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + V+G +G D + G+ N++ F G+D G +G D +
Sbjct: 134 VLVQAGLGNDIVIGGAGKDNLQGDGGNDIIFGWRGSDTIAGGAGDDLLY----------- 182
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ N D IL + + D+
Sbjct: 183 ----GDDLGFNNISGDDT---------------IDGGTGNDILYGGRGSDRMTGGDDDDI 223
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD----RGAAARHYITHGVKEGR 435
G DI S D L G+D + Y G
Sbjct: 224 LYGQAGGDNMSGGSGNDILHGDDADTNSNDTLNGDAGNDQLYGGAGSDELYGGTGDDLLD 283
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ A ++ ++ + D G
Sbjct: 284 GGSGNDYMHGGAGNDTILAGAGNDVIDGSADVDTLVFSGN 323
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/312 (11%), Positives = 87/312 (27%), Gaps = 24/312 (7%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+++ + N + AD G T+ + + LG
Sbjct: 913 GNELTNTITGNDAANMLSGGLGADILYGMGGADALDGGDDNDTLFGGDGDDMLVGGLGDD 972
Query: 136 HPGSYNGGYPVYGV--DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ G + G ++ Y DS+ S + + VS +A +
Sbjct: 973 YLDGGAGADSMTGGLGNDSYIVDSWSDDGNSANDDLIVELAGEGTDQVSASVSYKMAAEI 1032
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G+ + + I ++ + + L GG+ N L +
Sbjct: 1033 EKLVLTGTDSIDGIGND-----------IANTMTGNSGNNGLWGGLGNDTLLGNGGDDRL 1081
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + ++ + + G + D + G + +++ +G D G + D F +
Sbjct: 1082 YGEDGQDSLDGGAGNDLLDGGAAGDTLKGGAGSDMLIGGAGKDTLTGGAEADVFIFN--- 1138
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ A+ + +E R ++ A+
Sbjct: 1139 --------RGDTTLNTASYDRITDFKAIEGDRIDLDFLNGSLPAADYAERTIATNNFADA 1190
Query: 374 VIGQDVFESMKH 385
+ + + H
Sbjct: 1191 LAAANTTAGVNH 1202
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 33/273 (12%), Positives = 65/273 (23%), Gaps = 20/273 (7%)
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
++ +G DV GS+ D FY F+N + + L+
Sbjct: 69 DLLMGGTGTDVIYGSNLSDAIFYNNGVISGGFGSFDNIEQFWLGDGDDIIDLTAHGAGGI 128
Query: 347 ADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ I+ A ++L G D+ + G D+ + L
Sbjct: 129 DYAKDVLVQAGLGNDIVIGGAGKDNLQGDGGNDIIFGWRGSDTIAGGAGDDLLYGDDLGF 188
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ + G Y G D L A +++ +
Sbjct: 189 NNISGDDTIDGGTGNDIL--YGGRGSDRMTGGDDDDILYGQAGGDNMSGGSGNDILHGDD 246
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
+ ++ D N + Y G
Sbjct: 247 ADTNSNDTL-----------------NGDAGNDQLYGGAGSDELYGGTGDDLLDGGSGND 289
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
+ A ++ ++ + A D G
Sbjct: 290 YMHGGAGNDTILAGAGNDVIDGSADVDTLVFSG 322
>gi|158424290|ref|YP_001525582.1| zinc-dependent metalloprotease [Azorhizobium caulinodans ORS 571]
gi|158331179|dbj|BAF88664.1| zinc-dependent metalloprotease [Azorhizobium caulinodans ORS 571]
Length = 709
Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats.
Identities = 67/378 (17%), Positives = 117/378 (30%), Gaps = 56/378 (14%)
Query: 5 KPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSK 64
+ + A + S + L + R ALG +
Sbjct: 54 TTSFNGSQPATVMTYAFPTSAADYSSIAGGYPDTQELAQFAPLTQTQMDAVRTALGLVAS 113
Query: 65 VVDLTFEETSIH----SDIKFI--SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK-- 116
+L F E + + ++F + P Y + D W G G+
Sbjct: 114 YTNLVFREVTSGLASEATLRFAQFTDTGSESRFPANSGPYASSDSRVAGDTWLGGNGQAP 173
Query: 117 ----GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
GT + +HE+GHA GL H + + ND E + S
Sbjct: 174 AAYFGTDALNTIMHEMGHAFGLKHGHDGSFNGALAPQFNDNEFSVMSYASYFGANTAGST 233
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN-IYKIEVQQ----------------KD 215
+ + M+ DI A+Q++YGA +G +YK +
Sbjct: 234 EAIAGSSPQSYMMFDIAALQELYGANFSKVGTTDVYKWDPVTGQETINGVPAPNTGASST 293
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI------------------GGYE 257
T++ +G DL+ + DL W + +
Sbjct: 294 GKIFSTVWTAGATVTYDLSAFNEDQVD-DLRPGQWLTFSKAQIADLNNEAVAGTAQYQAQ 352
Query: 258 KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
N+ A +++ +++ +G+D + GN NNV +GND G +G D
Sbjct: 353 GNIYNALLYHGDARSLVSNIITGNGSDKITGNDGNNVISAGAGNDWISGGNGNDII--SG 410
Query: 312 PSYLYKIYRFENAIIVYD 329
+ I I+ D
Sbjct: 411 GAGADTIIFGSGRNILRD 428
>gi|218438239|ref|YP_002376568.1| glycosyl transferase family 2 [Cyanothece sp. PCC 7424]
gi|218170967|gb|ACK69700.1| glycosyl transferase family 2 [Cyanothece sp. PCC 7424]
Length = 1067
Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 93/260 (35%), Gaps = 41/260 (15%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDD 410
Y +L + E + H+ + G EGRD FD+ YL +
Sbjct: 93 ISQSGLFDADFYGEKNPELKKS----QVEPLSHYLDIGSVEGRDPHPLFDTQYYLKQNPE 148
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ + HYI G G+NP F YI + D+ + + H
Sbjct: 149 VAAS----QINPLVHYILVGALNGKNPHPLFNTAYYIEKNLDVGESGMNP-------LVH 197
Query: 470 FSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKA 526
+ N G +EGR FD+ Y+ Y +L + + HY+ G K+ NP+ F
Sbjct: 198 YINHGAKEGRNPHPLFDTSYYVERYLNLISPTIN----PLVHYLQQGAKQRYNPNPLFDT 253
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYL-TSYDDLWNVF 583
YI + L+ P + H+ N G ++G F+ YL S DL
Sbjct: 254 SFYIQQNPKLLE-LETNPLI------HYINIGAKQGLNPHPLFDTAFYLKQSQTDLV--- 303
Query: 584 GSDRSAAAQHYITHGMKEGR 603
H+ G EGR
Sbjct: 304 ---HHDPLAHFFEFGALEGR 320
Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats.
Identities = 63/287 (21%), Positives = 95/287 (33%), Gaps = 51/287 (17%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVF 415
Y ++ + H+ G G++ F++ Y+ D+
Sbjct: 136 LFDTQYYLKQNPEVAAS----QINPLVHYILVGALNGKNPHPLFNTAYYIEKNLDV---- 187
Query: 416 GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
G HYI HG KEGRNP F Y+ + +LI+ + H+ G
Sbjct: 188 GESGMNPLVHYINHGAKEGRNPHPLFDTSYYVERYLNLISPTINP-------LVHYLQQG 240
Query: 475 CEE--GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIA 531
++ FD+ Y+ L HYI G K+G NP F Y+
Sbjct: 241 AKQRYNPNPLFDTSFYIQQNPKLLE----LETNPLIHYINIGAKQGLNPHPLFDTAFYLK 296
Query: 532 -SHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRS 588
S DL++ P HF FG EGR F+ Y+ Y L
Sbjct: 297 QSQTDLVH---HDPL------AHFFEFGALEGRDPHPLFDTSYYVERYSQLIP----QGM 343
Query: 589 AAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHK 635
HY+ EG LG + + S + + FD +
Sbjct: 344 NPLVHYLQ----EGAKLGYNPNPLF------DTSFYLEENATIFDLE 380
Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 67/228 (29%), Gaps = 35/228 (15%)
Query: 385 HFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FK 441
H+ G +G + FD+ YL H+ G EGR+P F
Sbjct: 273 HYINIGAKQGLNPHPLFDTAFYLKQSQT-----DLVHHDPLAHFFEFGALEGRDPHPLFD 327
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVF 499
Y+ + LI + H+ G + G FD+ YL
Sbjct: 328 TSYYVERYSQLIPQGMNP-------LVHYLQEGAKLGYNPNPLFDTSFYLEEN----ATI 376
Query: 500 GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
HYI G ++G NP F Y+ + + HF G
Sbjct: 377 FDLEINPLIHYINIGFRQGLNPHPLFDTAFYLKQ-------LGSSLEPRINPLIHFLEIG 429
Query: 559 YEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
+G F+ YL D+ H++ G E R
Sbjct: 430 ACQGLDPHPLFDTSHYLEKNSDVR----ESGMNPLVHFVQFGAIEKRE 473
Score = 98.3 bits (243), Expect = 3e-18, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 79/231 (34%), Gaps = 34/231 (14%)
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--T 398
+ + + + + + S DL+ D HF+EFG EGRD
Sbjct: 272 IHYINIGAKQGLNPHPLFDTAFYLKQSQTDLVH---HDPL---AHFFEFGALEGRDPHPL 325
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y+ Y L HY+ G K G NP+ F Y+ + + +
Sbjct: 326 FDTSYYVERYSQLIP----QGMNPLVHYLQEGAKLGYNPNPLFDTSFYLEENATIFDLEI 381
Query: 458 DAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ H+ N G +G FD+ YL + H++ G
Sbjct: 382 NP-------LIHYINIGFRQGLNPHPLFDTAFYLKQLGSSLEPRIN----PLIHFLEIGA 430
Query: 516 KEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
+G +P F Y+ + D+ + P + HF FG E R
Sbjct: 431 CQGLDPHPLFDTSHYLEKNSDVRES-GMNPLV------HFVQFGAIEKREP 474
Score = 86.4 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 18/130 (13%)
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDL 536
+ FD+ Y +L+ + HY+ G EGR+P F Y+ + ++
Sbjct: 94 SQSGLFDADFYGEKNPELKKS----QVEPLSHYLDIGSVEGRDPHPLFDTQYYLKQNPEV 149
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
+ P + H+ G G++ FN Y+ D+ G HY
Sbjct: 150 AAS-QINPLV------HYILVGALNGKNPHPLFNTAYYIEKNLDV----GESGMNPLVHY 198
Query: 595 ITHGMKEGRA 604
I HG KEGR
Sbjct: 199 INHGAKEGRN 208
>gi|71281942|ref|YP_268540.1| putative protease [Colwellia psychrerythraea 34H]
gi|71147682|gb|AAZ28155.1| putative protease [Colwellia psychrerythraea 34H]
Length = 656
Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats.
Identities = 74/354 (20%), Positives = 123/354 (34%), Gaps = 66/354 (18%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWR 111
++V L S+V +TFEE + F+ Y + +
Sbjct: 96 KDVIVDVLTHISEVSGITFEEKFTRENSDFVFRIGAYTGSGSNVPPIDEADYIRYSYRRT 155
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY------------------ 153
+ H + H L H +D+
Sbjct: 156 VTFSQS--------HAL-HYLNPNHDFYLRVKNDDIDYKHDFARSKAVILRDISRIIGLT 206
Query: 154 ------ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
EN++ SVM+ P+ + + + T DIV +Q +YG P +
Sbjct: 207 RWNDGQENNNDFYSVMA---PKATGLSSETFAPTTLKKYDIVMLQHLYGKPFKVETDPNM 263
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG------------ 255
F Q I D G+D + + N IDL+ ++SSI
Sbjct: 264 TYNYDDS-YDFHQMIVDKDGEDTISVVN-SQRSNIIDLHPGAFSSIASRPTGFFDPDTES 321
Query: 256 -----YEKNMTIAQHTVIESVVGSSGNDVVIGN---------SANNVFFESSGNDVFDGS 301
N++I T IE+ G S NDV+IGN + ++ GND+ DG
Sbjct: 322 EHLNRSYNNLSIDYGTRIENAEGGSNNDVLIGNYTANKLNGNAGDDKIQGYGGNDLIDGG 381
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDS 353
+G+DT Y Y+I N++ V + D L+++E ++F+D+ I
Sbjct: 382 AGIDTAVYANEKVQYEIEYVGNSVTVLTLPSGNEGLDTLTNIEFIQFSDETIAI 435
>gi|209963360|ref|YP_002296275.1| hypothetical protein RC1_0011 [Rhodospirillum centenum SW]
gi|209956826|gb|ACI97462.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 1110
Score = 124 bits (310), Expect = 7e-26, Method: Composition-based stats.
Identities = 65/297 (21%), Positives = 103/297 (34%), Gaps = 27/297 (9%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G NI +V + G + + + + YI L + ++ G + T
Sbjct: 816 SGTNIELRDVDYAVVTGSVFVTGGTGSN---VVIGDDARQYIRLGPD-DDTLRGGGGDDT 871
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G GND V G + +G+D DG SG+D A +
Sbjct: 872 VGSGEGRDLLYGDEGNDSVFGGEGYDRLSGGAGDDTIDGGSGVDVVRIEAARSAVTLEAA 931
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCI------------DSVNVKQRSILEYTASYE 369
+ D S VE +RF DQ + +
Sbjct: 932 GPWGVRLSGAATGTDVASGVELIRFDDQVVYVTLPVRFEAVQPDGGGAFDEAFYLARWAD 991
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDL-RNVFGSDRGAAARHY 426
V V ++H+ FG +EGRD T FD YL + D+ V + HY
Sbjct: 992 VRAAVNAGQVMSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAVEAGQFHSGYEHY 1051
Query: 427 ITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ G +E R+P A F Y+ + D+ +A D H+ +G E R T
Sbjct: 1052 LAFGWREDRDPSAWFDLSAYLQRNPDVADAGIDP-------LRHWLVWGIGENRIAT 1101
Score = 91.0 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 48/314 (15%), Positives = 92/314 (29%), Gaps = 32/314 (10%)
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D + ++ + +++ D D + LR + + R +L
Sbjct: 823 RDVDYAVVTGSVFVTGGTGSNVVIGDDARQYIRLGPDDDTLRGGGGDDTVGSGEGRDLLY 882
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ + G D G D+ + + AA
Sbjct: 883 GDEGNDSVFGGEGYDRLSGGAGDDTIDGGSGVDVVR-----------IEAARSAVTLEAA 931
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ + + + +D + V D F
Sbjct: 932 GPWGVR-LSGAATGTDVASGVELIRFDDQVVYVTLPVRFEAVQPDGGGA----------F 980
Query: 484 DSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
D YL + D+R + + + HY+ G EGR+P F Y+A D+ A
Sbjct: 981 DEAFYLARWADVRAAVNAGQVMSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAV- 1039
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+G +H+ FG+ E R + F+ YL D+ + +H++ G+
Sbjct: 1040 -EAGQFHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNPDVADA----GIDPLRHWLVWGI 1094
Query: 600 KEGRALGISGMQFK 613
E R +
Sbjct: 1095 GENRIATAADTGLW 1108
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 50/283 (17%), Positives = 81/283 (28%), Gaps = 41/283 (14%)
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + + ++ + + R + + L G D S
Sbjct: 816 SGTNIELRDVDYAVVTGSVFVTGGTGSNVVIGDDARQYIRLGPDDDTLRGGGGDDTVGSG 875
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ EG D F Y D L G D +G + +
Sbjct: 876 EGRDLLYGDEGNDSVFGGEGY----DRLSGGAGDDTI------------DGGSGVDVVRI 919
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
E S L A L G E + FD + + D
Sbjct: 920 EAARSAVTLEAAGPWGVRLSGAATGTDVASGVE---LIRFDDQVVYVTLPVRFEAVQPDG 976
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G A F Y+A D+ A V +G +H+ FG EGR
Sbjct: 977 GGA-----------------FDEAFYLARWADVRAAV--NAGQVMSGLEHYLAFGQAEGR 1017
Query: 564 SIT--FNPDLYLTSYDDLWNVFGSDRS-AAAQHYITHGMKEGR 603
T F+ + YL + D+ + + + +HY+ G +E R
Sbjct: 1018 DPTPLFDEEAYLARWADVRVAVEAGQFHSGYEHYLAFGWREDR 1060
Score = 42.5 bits (98), Expect = 0.27, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 75/297 (25%), Gaps = 19/297 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
S G + Q S ++ I G D+ +T T +
Sbjct: 193 SASDGTVTITVGGDQIGSGKVERITAQAGADVTLVTSSASFDASELTVTNIDTITTTRAG 252
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-FDGSS----GLDTFFYYAPS 313
I ++G SG D + G+ ++ +G+D+ G G D A
Sbjct: 253 GTAITDSGESTRIIGGSGADTLAGSFGDDTLDGGAGDDIFLYGGGNTDNGRDLIQNLATG 312
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ ++ + + A L++++ + + A +
Sbjct: 313 DIIRVSNADFSATTITAGNGTSVGLNEIQIATANGRTTLHIGTD--------AQADAADL 364
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
VI D + +F G + ++ + + + T + +
Sbjct: 365 VIDLDGLYTADNFKLSGSDI--TVNLNASPVITAPGTAAVAENATGVTL----GTISLAD 418
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
G N L + L A G Y
Sbjct: 419 GDNDAQTVTLSVGSGSFGLDTAGLSVVSDDTTAGRTLVVSGSVGALNTALAGLTYTP 475
>gi|209967145|ref|YP_002300060.1| hypothetical protein RC1_3906 [Rhodospirillum centenum SW]
gi|209960611|gb|ACJ01248.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 912
Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats.
Identities = 64/297 (21%), Positives = 102/297 (34%), Gaps = 27/297 (9%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G NI +V + G + + + + YI L + ++ G + T
Sbjct: 618 SGTNIELRDVDYAVVTGSVFVTGGTGSN---VVIGDDARQYIRLGPD-DDTLRGGGGDDT 673
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G GND V G + +G+D DG SG+D A +
Sbjct: 674 VGSGEGRDLLYGDEGNDSVFGGEGYDRLSGGAGDDTIDGGSGVDVVRIEAARSAVTLEAA 733
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCI------------DSVNVKQRSILEYTASYE 369
+ D S VE +RF DQ + +
Sbjct: 734 GPWGVRLSGAATGTDVASGVELIRFDDQVVYVTLPVRFAAVQPDGGGAFDEAFYLAQWAD 793
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDL-RNVFGSDRGAAARHY 426
V ++H+ FG +EGRD T FD YL + D+ V + HY
Sbjct: 794 VRAAVADGRFQSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAVEAGQFHSGYEHY 853
Query: 427 ITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ G +E R+P A F Y+ + D+ +A D H+ +G E R T
Sbjct: 854 LAFGWREDRDPSAWFDLSAYLQRNPDVADAGIDP-------LRHWLVWGIGEDRIAT 903
Score = 91.8 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/316 (15%), Positives = 90/316 (28%), Gaps = 32/316 (10%)
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D + ++ + +++ D D + LR + + R +L
Sbjct: 625 RDVDYAVVTGSVFVTGGTGSNVVIGDDARQYIRLGPDDDTLRGGGGDDTVGSGEGRDLLY 684
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ + G D G D+ + + AA
Sbjct: 685 GDEGNDSVFGGEGYDRLSGGAGDDTIDGGSGVDVVR-----------IEAARSAVTLEAA 733
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ + + + +D + V D F
Sbjct: 734 GPWGVR-LSGAATGTDVASGVELIRFDDQVVYVTLPVRFAAVQPDGGGA----------F 782
Query: 484 DSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
D YL + D+R + HY+ G EGR+P F Y+A D+ A
Sbjct: 783 DEAFYLAQWADVRAAVADGRFQSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAV- 841
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+G +H+ FG+ E R + F+ YL D+ + +H++ G+
Sbjct: 842 -EAGQFHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNPDVADA----GIDPLRHWLVWGI 896
Query: 600 KEGRALGISGMQFKSV 615
E R +
Sbjct: 897 GEDRIATAADTGLWLA 912
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 52/283 (18%), Positives = 83/283 (29%), Gaps = 41/283 (14%)
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + + ++ + + R + + L G D S
Sbjct: 618 SGTNIELRDVDYAVVTGSVFVTGGTGSNVVIGDDARQYIRLGPDDDTLRGGGGDDTVGSG 677
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ EG D F Y D L G D +G + +
Sbjct: 678 EGRDLLYGDEGNDSVFGGEGY----DRLSGGAGDDTI------------DGGSGVDVVRI 721
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
E S L A L G E + FD + + D
Sbjct: 722 EAARSAVTLEAAGPWGVRLSGAATGTDVASGVE---LIRFDDQVVYVTLPVRFAAVQPDG 778
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G A F Y+A D+ A AD Q+G +H+ FG EGR
Sbjct: 779 GGA-----------------FDEAFYLAQWADVRAAVAD--GRFQSGLEHYLAFGQAEGR 819
Query: 564 SIT--FNPDLYLTSYDDLWNVFGSDRS-AAAQHYITHGMKEGR 603
T F+ + YL + D+ + + + +HY+ G +E R
Sbjct: 820 DPTPLFDEEAYLARWADVRVAVEAGQFHSGYEHYLAFGWREDR 862
Score = 42.1 bits (97), Expect = 0.33, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 72/291 (24%), Gaps = 20/291 (6%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
I Q + +G D L + + + + + I
Sbjct: 2 TITVGGDQIGSGKVERITAQAGADVTLVTSSASFDASELTVTN-IDTITTTRAGGTAITD 60
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-FDGSS----GLDTFFYYAPSYLYKIY 319
++G SG D + G+ ++ +G+D+ G G D A + ++
Sbjct: 61 SGESTRIIGGSGADTLAGSFGDDTLDGGAGDDIFLYGGGNTDNGRDLIQNLATGDIIRVS 120
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + A L++++ + + A + VI D
Sbjct: 121 NADFSATTITAGNGTSVGLNEIQIATANGRTTLHIGTD--------AQADAADLVIDLDG 172
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ +F G + ++ + + + T + +G N
Sbjct: 173 LYTADNFKLSGSDI--TVNLNASPVITAPGTAAVAENATGVTL----GTISLADGDNDAQ 226
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
L + L A G Y
Sbjct: 227 TVTLSVGSGSFGLDTAGLSVVSDDTTAGRTLVVSGSVGALNTALAGLTYTP 277
>gi|190890431|ref|YP_001976973.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Rhizobium etli CIAT 652]
gi|190695710|gb|ACE89795.1| putative rhizobiocin/RTX toxin and hemolysin-type calcium binding
protein [Rhizobium etli CIAT 652]
Length = 2608
Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats.
Identities = 90/528 (17%), Positives = 154/528 (29%), Gaps = 58/528 (10%)
Query: 85 NNGYVCTPRY---DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS-Y 140
+ + P + + + G G H HE+GHALGL H
Sbjct: 109 DTAWAYLPGADGRGGDVWFGTGYAGTEDDLRFPGFGNYAGHTLAHELGHALGLKHAHEAG 168
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-K 199
+ V D + +T D + G T M+ DI A+Q++YGA
Sbjct: 169 DFNGIVVPNAYDSLEYTIMTYRTYVGDNADGLEYEHDGAPQTFMMLDIAALQEMYGADYT 228
Query: 200 GSLGNNIYKIEVQQK-------------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+ G+ +Y+ + + TI+D GG D DL+ + IDL
Sbjct: 229 TNSGDTVYRWNPNEGITYVDGVAAITPDANRIFATIWDGGGIDTYDLSAYTTALS-IDLR 287
Query: 247 TESWS--------SIGGYEKNMTIAQH------------TVIESVVGSSGNDVVIGNSAN 286
+S +GG N + ++IE+V SGND ++GN AN
Sbjct: 288 AGGYSVFSRGQLADLGGGPNNGYARGNIFNALLYDGNVASLIENVQAGSGNDKIVGNEAN 347
Query: 287 NVFFESSGNDVFDGSSGLDTFFYY-------APSYLYKIYRFENAIIVYDANEHKQDFL- 338
N + + G+D G G DT + +N V ++ D +
Sbjct: 348 NTLWGNDGDDSLYGGIGNDTLIGGADSDWMVGGAGDDLYVVDDNFDSVIESANQGTDTVQ 407
Query: 339 ---------SDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
++VE L + + + A + L G D
Sbjct: 408 TALSIHTLGNNVETLTYTGSASFTGTGNALANTITGGAGNDTLNGGAGADTLIGGAGDDA 467
Query: 389 FGLSEGRDITFDSYL-YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
+ + DI ++ + + + YI G D + A
Sbjct: 468 YIVDNAADIVTEAADEGVDTVRATSANYTLGANLENLTYIGTAAFTGTGNDLANTIRGAA 527
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ L + G D + + + L +
Sbjct: 528 GADTLDGKAGADILIGGAGNDTYVVDDVGDVVTEGLNEGTDLIKTTLSSYTLTINANVEN 587
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
Y G + A ++ L + AG D +
Sbjct: 588 LTYTGFASFTGTGNALANTITGGAGNDTLDGGTGNDTLAGGAGNDTYL 635
Score = 90.6 bits (223), Expect = 7e-16, Method: Composition-based stats.
Identities = 63/527 (11%), Positives = 125/527 (23%), Gaps = 10/527 (1%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D I E + R AL +S + E + F + N
Sbjct: 632 DTYLVDSTGDLINEAVSAGTDEIRTALAAYSIAAVVNVENLTYTGSANFTGTGNALANVI 691
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ AD G G T + N + A +
Sbjct: 692 SGGAGNDTLNGGTGADSLIGGEGDDTYIVDNVGDVVTEAADEGTDTVRTTLASYTLGADV 751
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG-----NNIY 207
+++ + + + G + + G ++
Sbjct: 752 ENLTYIGIGTVAFVGTGNDLDNTILGGAGADTLDGKAGADSLIGGAGNDTYIVDDVGDVV 811
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + + ++ G ++ ++I G N T+
Sbjct: 812 TEGLNAGTDLIKTALSSYTLGNNVENLQYTGSASFTGTGNALLNTITGGAGNDTLDGGIG 871
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G GND +IG + ++ G+D++ D + +
Sbjct: 872 NDTLNGGGGNDTLIGGAGSDTMSGGMGDDIYVVDIATDVVIENVNEGTDTVQTALAGYTL 931
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKH 385
+ E+ S L A + LI +G D ++
Sbjct: 932 GNNVENLTYTGSASFTGTGNALANTITGGAFNDTLNGGAGADTLIGGVGDDTYIVDNAAD 991
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
EG D + D+ N A A L
Sbjct: 992 VVTEAADEGVDTVRTTLTSYTLGSDVEN-LAYIGTLAFVGAGNDLDNMITGGAAADTLSG 1050
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
++ L + G D + G VT + + +
Sbjct: 1051 GFGNDVLNGGGGADTLIGGAGNDTYI--VDHAGDIVTEAASAGTDTVRTTLAAYTLAANV 1108
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
YI G + A+ + L+ A + + G D
Sbjct: 1109 ENLTYIGTAAFAGAGNSLDNTITGGAAADKLMGAGGNDTLIGGGGAD 1155
Score = 84.5 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 74/556 (13%), Positives = 134/556 (24%), Gaps = 55/556 (9%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + +TE + R L ++ D+ + F+ + N T
Sbjct: 716 DTYIVDNVGDVVTEAADEGTDTVRTTLASYTLGADVENLTYIGIGTVAFVGTGNDLDNTI 775
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ AD G G T + + V +
Sbjct: 776 LGGAGADTLDGKAGADSLIGGAGNDTYIV-------------------DDVGDVVTEGLN 816
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D T++ SY + + G + + + GA +L I
Sbjct: 817 AGTDLIKTALSSYTLGNNVENLQYTGSASFTGTGNALLNTITGGAGNDTLDGGI--GNDT 874
Query: 213 QKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
T+ G D + + I+ E ++ T+ +
Sbjct: 875 LNGGGGNDTLIGGAGSDTMSGGMGDDIYVVDIATDVVIENVNEGTDTVQTALAGYTLGNN 934
Query: 266 TVIESVVGSSG--------NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ GS+ + + G + N+ +G D G G DT+ + +
Sbjct: 935 VENLTYTGSASFTGTGNALANTITGGAFNDTLNGGAGADTLIGGVGDDTYIVDNAADVVT 994
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIG 376
E V SDVE L + +++ A+ + L G
Sbjct: 995 EAADEGVDTVRTTLT-SYTLGSDVENLAYIGTLAFVGAGNDLDNMITGGAAADTLSGGFG 1053
Query: 377 QDVFESMKHFYEFGLSEGRDITF-DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
DV G D D + + AA +
Sbjct: 1054 NDVLNGGGGADTLIGGAGNDTYIVDHAGDIVTEAASAGTDTVRTTLAAYTLAANVENLTY 1113
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD-- 493
A A + + A + G D G + +Y+
Sbjct: 1114 IGTAAFAGAGNSLDNTITGGAAADKLMGAGGNDTLIGGGGADTMLGGIGDDIYVVDIAAD 1173
Query: 494 ---DLRNVFGSDRGAAARHYITHGVKEGRNPDAF-----------KALEYIASHEDLINA 539
+ N A Y E F + A ++ L
Sbjct: 1174 LVIENVNEGTDTVQTALVGYTLGNNVENLTYTGFANFSGTGNALANTITGGAGNDTLNGG 1233
Query: 540 FADAPDLVQAGKDHFS 555
+ AG D +
Sbjct: 1234 AGADTLIGGAGSDTYI 1249
Score = 83.7 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 73/576 (12%), Positives = 131/576 (22%), Gaps = 70/576 (12%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + R AL ++ D+ E + F + N T
Sbjct: 1938 DTYVVDNAGDTVTEAADEGSDTVRTALANYTLGSDV--ENLTYTGAAAFTGTGNSLANTI 1995
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ AD+ G G T + + V +
Sbjct: 1996 TGGAGADTLDGKAGADILIGGAGNDTYIV-------------------DDVGDVVTEGLN 2036
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D T + SY + + G + + + GA
Sbjct: 2037 AGTDLIKTVLSSYTLGNNVENLLYTGSASFTGTGNALVNTITGGA-----------GNDT 2085
Query: 213 QKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
T+ GDD+ D+ + I ++S +
Sbjct: 2086 LDGGAGNDTLDGGAGDDIYVVDSASDVIKDSAGTDEIRTALAAYSIAALANVENLTYTGS 2145
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ G++ +++ G + N++ +G D G +G DT+ L
Sbjct: 2146 ANFTGTGNALANMITGGAGNDMLNGGAGADSLIGGAGNDTYIVDHAGDLVIEAADAGIDT 2205
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDVFESMKH 385
V SDVE L + + + + A+ + L G D
Sbjct: 2206 VRT-TLASYTLGSDVEHLTYIGTTAFAGTGNDLDNTITGGAAADTLSGGAGNDTLNGGAG 2264
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
G D + G G+D T G A
Sbjct: 2265 ADHMIGGAGDDTYI--VDHAGDVVTEAASAGTDTVRTTLASYTLGSDVEHLTFLGTAAFA 2322
Query: 446 IASHE---DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD-----DLRN 497
+ ++ A G D + + Y+ + +
Sbjct: 2323 GTGNSLDNTIMGGAAADTLSGGAGNDTLNGGAGADRLIGGTGDDTYIVDNAGDIVTEAAD 2382
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA--------------------FKALEYIASHEDLI 537
A Y E L A + LI
Sbjct: 2383 AGTDTVHTALASYTLGSNVENLTYTGSGNFSGAGNALANTITGGAGNDVLNGGAGADTLI 2442
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYL 573
+V D + ++ Y
Sbjct: 2443 GGAGSDTYIVDHAGDIVTEAAGAGTDTVRTTLASYA 2478
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 59/482 (12%), Positives = 114/482 (23%), Gaps = 39/482 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + +TE ++ + L ++ ++ E + F + N T
Sbjct: 548 DTYVVDDVGDVVTEGLNEGTDLIKTTLSSYTLTINANVENLTYTGFASFTGTGNALANTI 607
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D G G T L + I A V
Sbjct: 608 TGGAGNDTLDGGTGNDTLAGGAGNDTYLVDSTGDLINEA-----------------VSAG 650
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ + S + G + +A GA
Sbjct: 651 TDEIRTALAAYSIAAVVNVENLTYTGSANFTGTGNALANVISGGA-----------GNDT 699
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGG--------VKNYIDLNTESWSSIGGYEKNMTIAQ 264
++ GDD + +G + + S++ E I
Sbjct: 700 LNGGTGADSLIGGEGDDTYIVDNVGDVVTEAADEGTDTVRTTLASYTLGADVENLTYIGI 759
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
TV G+ ++ ++G + + +G D G +G DT+
Sbjct: 760 GTVAFVGTGNDLDNTILGGAGADTLDGKAGADSLIGGAGNDTYIVD-DVGDVVTEGLNAG 818
Query: 325 IIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ ++VE L++ + + A + L IG D
Sbjct: 819 TDLIKTALSSYTLGNNVENLQYTGSASFTGTGNALLNTITGGAGNDTLDGGIGNDTLNGG 878
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ + + + + + L
Sbjct: 879 GGNDTLIGGAGSDTMSGGMGDDIYVVDIATDVVIENVNEGTDTVQTALAGYTLGNNVENL 938
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFG-CEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
Y S A A + + N G + Y+ +D
Sbjct: 939 TYTGSASFTGTGNALANTITGGAFNDTLNGGAGADTLIGGVGDDTYIVDNAADVVTEAAD 998
Query: 503 RG 504
G
Sbjct: 999 EG 1000
Score = 81.0 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 63/474 (13%), Positives = 115/474 (24%), Gaps = 27/474 (5%)
Query: 32 PDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCT 91
D +TE + R L ++ ++ E S F + N T
Sbjct: 1245 SDTYIVDDAGDIVTEAADAGSDTVRTNLASYTLTANV--ENLSFAGTGTFAGTGNNLDNT 1302
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
+ D+ G G +++ +
Sbjct: 1303 ITGGAATDTLSGGAGNDMLDGGAGADSLIGGLGDD----------TYVVDNAGDTVTEAA 1352
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
D +D+ T++ +Y + D G A + +A GA
Sbjct: 1353 DEGSDTVRTALANYTLGSDVENLTYTGAAAFTGTGNSLANTITGGA-----------GAD 1401
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ G+D + +G LN + I + T+ + +
Sbjct: 1402 TLDGKAGADILIGGAGNDTYIVDDVG-DVVTEGLNAGT-DLIKTVLSSYTLGNNVENL-L 1458
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
S + GN+ N +GND DG +G DT A +Y + + I
Sbjct: 1459 YTGSASFTGTGNALVNTITGGAGNDTLDGGAGNDTLDGGAGDDIYVVDSASDVIKDSAGT 1518
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ + L+ A+ + A + G D+
Sbjct: 1519 DEIRTALAAYSIAALANVENLTYTGSANFTGTGNALANMITGGAGNDMLNGGAGADSLIG 1578
Query: 392 SEGRDITF-DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G D D L + A+ + A
Sbjct: 1579 GAGNDTYIVDHAGDLVIEAADAGIDTVRTTLASYTLGSDVEHLTYIGTTAFAGTGNDLDN 1638
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ A G D + G + Y+ +D G
Sbjct: 1639 TITGGAAADTLSGGAGNDVLNGGGGADTLIGGAGDDTYIVDNAGGIVTEAADEG 1692
Score = 80.6 bits (197), Expect = 9e-13, Method: Composition-based stats.
Identities = 67/543 (12%), Positives = 134/543 (24%), Gaps = 37/543 (6%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + E + R L ++ D+ E + F + N T
Sbjct: 1583 DTYIVDHAGDLVIEAADAGIDTVRTTLASYTLGSDV--EHLTYIGTTAFAGTGNDLDNTI 1640
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ DV G G T++ + + D
Sbjct: 1641 TGGAAADTLSGGAGNDVLNGGGGADTLIGGAGDD----------TYIVDNAGGIVTEAAD 1690
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ +Y + + G A + + + GA +L
Sbjct: 1691 EGIDTVRTNLSAYTLGVNVENLTYIGTAAFVGIGNSLDNTITSGAAADTLSGGD--GNDT 1748
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIG---------------GVKNYIDLNTESWSSIGGYE 257
+ GDD + +G L + +
Sbjct: 1749 LNGGAGADRLIGGAGDDTYVVDNVGDIVTEAADAGTDTVHTALASYTLGSNVENLTYTGS 1808
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + A + + ++ G +GND++ G + + +GND + D A +
Sbjct: 1809 GNFSGAGNALANTITGGAGNDMLNGGAGADSLIGGAGNDTYIVDHAGDIVTEAADAGTDT 1868
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + + E+ + + L A + L G
Sbjct: 1869 VRTNLASYTLTGNVENLNFAGTGAFAGTGNNLDNTITGGAATDTLSGGAGNDMLDGGAGA 1928
Query: 378 DVFESMKHFYEFGL-SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + + + G +T + + + Y G
Sbjct: 1929 DSLIGGLGDDTYVVDNAGDTVTEAADEGSDTVRTALANYTLGSDVENLTYTGAAAFTGTG 1988
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS----NFGCEEGRFVTFDSYLYLGSY 492
+ A + L + G D + EG D + S
Sbjct: 1989 NSLANTITGGAGADTLDGKAGADILIGGAGNDTYIVDDVGDVVTEGLNAGTDLIKTVLSS 2048
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPD---AFKALEYIASHEDLINAFADAPDLVQA 549
L N + + + G L+ A ++ L D +V +
Sbjct: 2049 YTLGNNVENLLYTGSASFTGTGNALVNTITGGAGNDTLDGGAGNDTLDGGAGDDIYVVDS 2108
Query: 550 GKD 552
D
Sbjct: 2109 ASD 2111
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 72/537 (13%), Positives = 140/537 (26%), Gaps = 43/537 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + R L ++ ++ E + F + N T
Sbjct: 1847 DTYIVDHAGDIVTEAADAGTDTVRTNLASYTLTGNV--ENLNFAGTGAFAGTGNNLDNTI 1904
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D+ G G +++ + D
Sbjct: 1905 TGGAATDTLSGGAGNDMLDGGAGADSLIGGLGDD----------TYVVDNAGDTVTEAAD 1954
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+D+ T++ +Y + D G A + +A GA
Sbjct: 1955 EGSDTVRTALANYTLGSDVENLTYTGAAAFTGTGNSLANTITGGA-----------GADT 2003
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ G+D + +G LN + I + T+ + +
Sbjct: 2004 LDGKAGADILIGGAGNDTYIVDDVG-DVVTEGLNAGT-DLIKTVLSSYTLGNNVENL-LY 2060
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAI 325
S + GN+ N +GND DG +G DT Y S I
Sbjct: 2061 TGSASFTGTGNALVNTITGGAGNDTLDGGAGNDTLDGGAGDDIYVVDSASDVIKDSAGTD 2120
Query: 326 IVYDA-NEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ A + L++VE L + + +++ A + L G D
Sbjct: 2121 EIRTALAAYSIAALANVENLTYTGSANFTGTGNALANMITGGAGNDMLNGGAGADSLIGG 2180
Query: 384 KHFYEFGLSEGRDITFDSYL-YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ + D+ ++ + + + YI G D
Sbjct: 2181 AGNDTYIVDHAGDLVIEAADAGIDTVRTTLASYTLGSDVEHLTYIGTTAFAGTGNDLDNT 2240
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE-------GRFVTFDSYLYLGSYDDL 495
+ A+ + L + G DH ++ G VT + +
Sbjct: 2241 ITGGAAADTLSGGAGNDTLNGGAGADHMIGGAGDDTYIVDHAGDVVTEAASAGTDTVRTT 2300
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ ++ G + A+ + L + AG D
Sbjct: 2301 LASYTLGSDVEHLTFLGTAAFAGTGNSLDNTIMGGAAADTLSGGAGNDTLNGGAGAD 2357
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 65/544 (11%), Positives = 135/544 (24%), Gaps = 39/544 (7%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + +TE + R L ++ D+ E + + F+ + N
Sbjct: 982 DTYIVDNAADVVTEAADEGVDTVRTTLTSYTLGSDV--ENLAYIGTLAFVGAGNDLDNMI 1039
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ DV G G T++ + +
Sbjct: 1040 TGGAAADTLSGGFGNDVLNGGGGADTLIGGAGND----------TYIVDHAGDIVTEAAS 1089
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ +Y + + G A + + GA L
Sbjct: 1090 AGTDTVRTTLAAYTLAANVENLTYIGTAAFAGAGNSLDNTITGGAAADKLMG--AGGNDT 1147
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS----------------IGGY 256
T+ GDD + + I ++N + +
Sbjct: 1148 LIGGGGADTMLGGIGDD-IYVVDIAADLVIENVNEGTDTVQTALVGYTLGNNVENLTYTG 1206
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N + + + ++ G +GND + G + + +G+D + D A +
Sbjct: 1207 FANFSGTGNALANTITGGAGNDTLNGGAGADTLIGGAGSDTYIVDDAGDIVTEAADAGSD 1266
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + + E+ + + L A + L G
Sbjct: 1267 TVRTNLASYTLTANVENLSFAGTGTFAGTGNNLDNTITGGAATDTLSGGAGNDMLDGGAG 1326
Query: 377 QDVFESMKHFYEFGL-SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
D + + + G +T + + + Y G
Sbjct: 1327 ADSLIGGLGDDTYVVDNAGDTVTEAADEGSDTVRTALANYTLGSDVENLTYTGAAAFTGT 1386
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS----NFGCEEGRFVTFDSYLYLGS 491
+ A + L + G D + EG D + S
Sbjct: 1387 GNSLANTITGGAGADTLDGKAGADILIGGAGNDTYIVDDVGDVVTEGLNAGTDLIKTVLS 1446
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPD---AFKALEYIASHEDLINAFADAPDLVQ 548
L N + + + G L+ A ++ L D +V
Sbjct: 1447 SYTLGNNVENLLYTGSASFTGTGNALVNTITGGAGNDTLDGGAGNDTLDGGAGDDIYVVD 1506
Query: 549 AGKD 552
+ D
Sbjct: 1507 SASD 1510
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/363 (13%), Positives = 91/363 (25%), Gaps = 29/363 (7%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + E + R L ++ D+ E + F + N T
Sbjct: 2184 DTYIVDHAGDLVIEAADAGIDTVRTTLASYTLGSDV--EHLTYIGTTAFAGTGNDLDNTI 2241
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D G G ++ + V
Sbjct: 2242 TGGAAADTLSGGAGNDTLNGGAGADHMIGGAGDD----------TYIVDHAGDVVTEAAS 2291
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ SY + D G A + + + GA +L
Sbjct: 2292 AGTDTVRTTLASYTLGSDVEHLTFLGTAAFAGTGNSLDNTIMGGAAADTLSGGA--GNDT 2349
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIG---------------GVKNYIDLNTESWSSIGGYE 257
+ GDD + G L + +
Sbjct: 2350 LNGGAGADRLIGGTGDDTYIVDNAGDIVTEAADAGTDTVHTALASYTLGSNVENLTYTGS 2409
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + A + + ++ G +GNDV+ G + + +G+D + D A +
Sbjct: 2410 GNFSGAGNALANTITGGAGNDVLNGGAGADTLIGGAGSDTYIVDHAGDIVTEAAGAGTDT 2469
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + + E+ + V + L A + L
Sbjct: 2470 VRTTLASYALGSNVENLTFIGTGAFVGIGNALNNVIVGGSGPNTLMGGAGNDILTGGAAI 2529
Query: 378 DVF 380
DVF
Sbjct: 2530 DVF 2532
Score = 38.2 bits (87), Expect = 4.8, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 64/258 (24%), Gaps = 32/258 (12%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + AL ++ ++ E + F + N T
Sbjct: 2366 DTYIVDNAGDIVTEAADAGTDTVHTALASYTLGSNV--ENLTYTGSGNFSGAGNALANTI 2423
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + AD G G T + + +
Sbjct: 2424 TGGAGNDVLNGGAGADTLIGGAGSDTYIV-------------------DHAGDIVTEAAG 2464
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ SY + + G A + + + + G
Sbjct: 2465 AGTDTVRTTLASYALGSNVENLTFIGTGAFVGIGNALNNVIVGG-----------SGPNT 2513
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ D+ + G + ++ + A + +
Sbjct: 2514 LMGGAGNDILTGGAAIDVFIFSPNWGHDTITNFVATGSANDVISIDDSIFADWESLFAAT 2573
Query: 273 GSSGNDVVIGNSANNVFF 290
SGND +I A+N
Sbjct: 2574 EQSGNDTIITADADNTIT 2591
>gi|94498284|ref|ZP_01304844.1| hypothetical protein SKA58_10818 [Sphingomonas sp. SKA58]
gi|94422286|gb|EAT07327.1| hypothetical protein SKA58_10818 [Sphingomonas sp. SKA58]
Length = 1089
Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats.
Identities = 81/437 (18%), Positives = 124/437 (28%), Gaps = 44/437 (10%)
Query: 79 IKFISSNNGYVCTPR---YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
Y P Y F +D G H HE+GH+LGL
Sbjct: 194 ANSSDPGTAYAYYPSSSIYGGDTFFGNGYDGTIYSYKTPVAGNYAWHTMFHELGHSLGLA 253
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
H + P D + +T P +G T M+ DI A+Q +Y
Sbjct: 254 HGQTGGAYGP-LPTAWDSIEFTVMTYRSYVGAPLSGYSYEQWGAPQTYMMLDIAALQAMY 312
Query: 196 GAP-KGSLGNNIYKIEVQQ-------------KDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
GA + GN Y + TI+D GG D DL+
Sbjct: 313 GADFTVNSGNTTYSWNPTTGETYINGQVAIDPGGNRIFATIWDGGGVDTYDLSNYSSNL- 371
Query: 242 YIDLNTESWSSIGGYEKNMTIAQH--------------------TVIESVVGSSGNDVVI 281
+DLN +S + ++IE+ G SGNDV+
Sbjct: 372 TLDLNPGGYSVFSQAQLAYLGNNGSSVYARGNIFNAMLYQGNTASMIENANGGSGNDVIS 431
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
GNS +NV + G+D G+ G DT + + + E +Y + +
Sbjct: 432 GNSIDNVLRGNGGDDSLYGNDGNDTLY--GNAGNDYLAGGEGDDTLYGGDGDDILDGAGG 489
Query: 342 ERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ + + A + IQ V E G + +
Sbjct: 490 TDVIYGGNGNDIIYGGFVTDSVYGEAGNDWFIQRQIGGVAEFGD--NVNGGTGVDTLDLS 547
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
G+ DL + GV+ + A+ L D
Sbjct: 548 QIDLYGAIVDLAGGTWQYNPLYGGPWTVTGVENVYGTQLADTITGNAAGNTLYGQSGDDS 607
Query: 461 DLVQVGKDHFSNFGCEE 477
G D +
Sbjct: 608 IDGMNGNDSIFGGAGSD 624
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 79/652 (12%), Positives = 153/652 (23%), Gaps = 86/652 (13%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + I + NG + + D G G T+ + +
Sbjct: 427 NDVISGNSIDNVLRGNGGDDSLYGNDGNDTLYGNAGNDYLAGGEGDDTLYGGDGDDILDG 486
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI-V 189
A G NG +YG + + + V + +
Sbjct: 487 AGGTDVIYGGNGNDIIYGGFVTDSVYGEAGNDWFIQRQIGGVAEFGDNVNGGTGVDTLDL 546
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ +YGA G ++ + + + G L D N +
Sbjct: 547 SQIDLYGAIVDLAGGT-WQYNPLYGGPWTVTGVENVYGTQLADTITGNAAGNTL-YGQSG 604
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF------------------FE 291
SI G N +I + + G +GND++ G + +++ +
Sbjct: 605 DDSIDGMNGNDSIFGGAGSDMLYGGAGNDILDGGAGDDLLIGGDGDDVFDGGSGRDLMYG 664
Query: 292 SSGND--------------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+G+D + G +G DTF S + Y
Sbjct: 665 EAGDDLFRLFDGWNGSYGEIIVGGAGSDTFDISGTSVATSTIDLADGTFNYTPGGAGAIS 724
Query: 338 LSDVERLRFADQCIDSVNVK---------QRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
LS +E + L + L G D+ +
Sbjct: 725 LSSIENVIGNTGSDAISGSGEVNSLWGRSGNDTLLGQGGNDFLYGEDGNDLLDGGTGVDY 784
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G D + + + + V+ + +
Sbjct: 785 MAGGTGNDTYYVDSASDAVIEFSNSGTDIVYASVTYSIAGTNVENITAVGSASLITGNGL 844
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV-----------TFDSYLYLGSYDDL-- 495
+ + + + G D G ++ D+ Y S +
Sbjct: 845 NNIITGSAIGNKLVGGGGDDTLLGEGGDDILDGGVGNDILDGGNGIDAADYRSSSAAVTV 904
Query: 496 -------RNVFGSDRGAAARHYITHGVKEGRNPD------------AFKALEYIASHEDL 536
+N G+ + G N L A +DL
Sbjct: 905 NLSVGVAQNTGGAGTDTLSNIENIFGSSYNDNLTGNSLSNFILAGNGNDTLNGGAGDDDL 964
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
+ +G D S G F T D +
Sbjct: 965 NGGNNNDYLNGGSGSD--SLTGGGGNDVFAFLNGFGPT-NVDTITDYSVANDTIN----- 1016
Query: 597 HGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
+ G+ + + A+ + ++ DL+ D G G
Sbjct: 1017 --ILSAAVGGLPTGTLAANAFHIGAAAADANDRIIYNSATGDLFYDADGSGA 1066
>gi|211971002|dbj|BAG82830.1| hypothetical protein [Pasteurella pneumotropica]
Length = 1377
Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats.
Identities = 69/477 (14%), Positives = 134/477 (28%), Gaps = 47/477 (9%)
Query: 35 LTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF------ISSNNGY 88
T +S ++ +E R++ E K V++ F E D I+ N
Sbjct: 829 WNTESISGYESDYTDREKESIRFSYREIEKYVNVKFVEVENVIDADSKVYKAKINDRNND 888
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ +N + +HEIGH L L H N G+
Sbjct: 889 TILGLASPGGNLALNGGSLSANLDNPTLKASSYNTNIHEIGHTLQLAHSAGENKGFTY-- 946
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIY 207
++ +V SY ++ + D+ + YG + GN+ Y
Sbjct: 947 ------EETSEFTVESYNGAMSLKQGTIVSRYSSLHLFDLATLHYRYGVNPEARKGNDTY 1000
Query: 208 KI-EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ +S I+D G D+ D + N ++L SW G K+ A+
Sbjct: 1001 GFKDYNATESDGALYIWDGAGIDVFDASNEKIGVN-VNLTPGSWLYRGNQLKSYFAAEGK 1059
Query: 267 VI---ESVVGSSGNDVVIGNSANNVFFESSG-------------NDVFDGSSGLDTFFYY 310
+ G N + G+ +++ + G D+ D
Sbjct: 1060 EFLTKHNYFGLDENIKINGSFVHDLAIKPPGFPPNLPVEMVIEYLDMIF----PDATKEE 1115
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +Y ++ + + +E L +D + ++ A +
Sbjct: 1116 IDRIRNMLVITHREFNIYTKDQAFIGYGTQIENLIGSDYADTLTGNNADNNIQGGAGDDV 1175
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD---LRNVFGSDRGAAARHYI 427
+ G D + G D + + +D G+D + Y
Sbjct: 1176 IRGGAGNDYLDGGIGIDTMYGGIG-----DDRYVVDNKEDKVIELANEGTDTVLSLVDYR 1230
Query: 428 THGVKEGRN--PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
E K A ++ + + G D +
Sbjct: 1231 LSENVENLTLLGTTAKLATGNAQDNVIMANNMGNTLVGEAGDDRLIGGLGADILIGG 1287
Score = 99.9 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 70/241 (29%), Gaps = 23/241 (9%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ I T IE+++GS D + GN+A+N +G+DV G +G D + +
Sbjct: 1134 TKDQAFIGYGTQIENLIGSDYADTLTGNNADNNIQGGAGDDVIRGGAGND--YLDGGIGI 1191
Query: 316 YKIYRFEN---------AIIVYDANEHKQDFL---------SDVERLRFADQCIDSVNVK 357
+Y V + D + +VE L
Sbjct: 1192 DTMYGGIGDDRYVVDNKEDKVIELANEGTDTVLSLVDYRLSENVENLTLLGTTAKLATGN 1251
Query: 358 Q-RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+++ L+ G D EG D F L D+ F
Sbjct: 1252 AQDNVIMANNMGNTLVGEAGDDRLIGGLGADILIGGEGNDT-FVFQTELNGNIDIITDFE 1310
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ A I + +G + ++Y A L + V +
Sbjct: 1311 TGDKIALSTLIFKSLSKGME-NISDYIQYNAKDGKLFYNADGNSNRDSVHFATLNKGAVI 1369
Query: 477 E 477
E
Sbjct: 1370 E 1370
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/230 (12%), Positives = 55/230 (23%), Gaps = 39/230 (16%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
D L + ++ D G D+ + + Y+ +
Sbjct: 1151 GSDYADTLTGNNADNNIQGGAGDDVIRGGAGNDYLDGGIGIDTMYGGIGDDRYVVDNKED 1210
Query: 496 ----RNVFGSDRGAAARHYITHGVKEGRNP--------DAFKALEYIASHE---DLINAF 540
G+D + Y E I ++ L+
Sbjct: 1211 KVIELANEGTDTVLSLVDYRLSENVENLTLLGTTAKLATGNAQDNVIMANNMGNTLVGEA 1270
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
D + G D G E + F + L D+ F + A I +
Sbjct: 1271 GDDRLIGGLGAD--ILIGGEGNDTFVFQTE--LNGNIDIITDFETGDKIALSTLIFKSLS 1326
Query: 601 EGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYY 650
+G + + ++ K L+ + G+ N
Sbjct: 1327 KG--------------------MENISDYIQYNAKDGKLFYNADGNSNRD 1356
Score = 39.4 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 27/265 (10%), Positives = 69/265 (26%), Gaps = 47/265 (17%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF-----GYCATPMVSDIVAVQKIY 195
+ + YG + S ++ +++ + G + + + +Y
Sbjct: 1136 DQAFIGYGTQIENLIGSDYADTLTGNNADNNIQGGAGDDVIRGGAGNDYLDGGIGIDTMY 1195
Query: 196 GAPKGSLGNNIYKIEVQ--------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
G +G++ Y ++ + + + + ++ D + ++ + G +
Sbjct: 1196 GG----IGDDRYVVDNKEDKVIELANEGTDTVLSLVDYRLSENVENLTLLGTTAKLATGN 1251
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ I T+ + ++G G D+ G G DTF
Sbjct: 1252 AQDNVIMANNMGNTLVGEAGDDRLIGG------------------LGADILIGGEGNDTF 1293
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ I + E + + ++Y A
Sbjct: 1294 VFQ--------TELNGNIDIITDFETGDKIALSTLIF----KSLSKGMENISDYIQYNAK 1341
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLS 392
L + HF
Sbjct: 1342 DGKLFYNADGNSNRDSVHFATLNKG 1366
>gi|187921346|ref|YP_001890378.1| group 1 glycosyl transferase [Burkholderia phytofirmans PsJN]
gi|187719784|gb|ACD21007.1| glycosyl transferase group 1 [Burkholderia phytofirmans PsJN]
Length = 665
Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats.
Identities = 62/271 (22%), Positives = 98/271 (36%), Gaps = 40/271 (14%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
R FD YL D+ + +HY+ HG EGRNP+ F + Y+ + D++
Sbjct: 37 RSDHFDRGFYLSQNKDVAAS----KTDPVKHYLAHGAFEGRNPNPNFDSAAYLRKYPDVV 92
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
A + H+ FG EGR T D+ + S +
Sbjct: 93 AAGINP-------LVHYVRFGEAEGRTATPDAARARDGRGSSLEIIESAERGKTTDANSA 145
Query: 514 GVKEGRNP-----------DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
GV+ RN F A Y+ ++ D+ A P DHF + G+ EG
Sbjct: 146 GVRRARNIRESDRKKVADSGLFSATYYLDTYADIAVA-KIDPL------DHFMDQGWREG 198
Query: 563 R--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSE 620
R + TF+ Y D+ HYI HG G G + + F++ +
Sbjct: 199 RRPNPTFDLGWYADQCPDVLKA----GINPLIHYIDHGKAGGFESGPNPIIFEAARKMI- 253
Query: 621 KSRDKADLSLSFD---HKKVDLYTDYFGDGN 648
+ S+ D + LY ++ G+
Sbjct: 254 AEAGAIEPSILLDNRLLEPESLYINHSNRGS 284
Score = 81.0 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 69/226 (30%), Gaps = 31/226 (13%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYL 405
D+ I + + + + D KH+ G EGR + FDS YL
Sbjct: 31 DRAILERSDHFDRGFYLSQNKDV--AASKTDPV---KHYLAHGAFEGRNPNPNFDSAAYL 85
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL------INAFADA 459
Y D+ HY+ G EGR A L
Sbjct: 86 RKYPDVVAA----GINPLVHYVRFGEAEGRTATPDAARARDGRGSSLEIIESAERGKTTD 141
Query: 460 PDLVQVGKDHFSNFGCEE--GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ V + + F + YL +Y D+ + H++ G +E
Sbjct: 142 ANSAGVRRARNIRESDRKKVADSGLFSATYYLDTYADIAVA----KIDPLDHFMDQGWRE 197
Query: 518 GRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
GR P+ F Y D++ A P + H+ + G G
Sbjct: 198 GRRPNPTFDLGWYADQCPDVLKA-GINPLI------HYIDHGKAGG 236
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 60/179 (33%), Gaps = 28/179 (15%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY-LYLGSYDDLRNVFGS 417
Y Y D++ G + H+ FG +EGR T D+ G L + +
Sbjct: 79 FDSAAYLRKYPDVVAA-GINPLV---HYVRFGEAEGRTATPDAARARDGRGSSLEIIESA 134
Query: 418 DRGAAAR----------HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
+RG + K+ + F A Y+ ++ D+ A D
Sbjct: 135 ERGKTTDANSAGVRRARNIRESDRKKVADSGLFSATYYLDTYADIAVAKIDP-------L 187
Query: 468 DHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
DHF + G EGR TFD Y D+ + HYI HG G
Sbjct: 188 DHFMDQGWREGRRPNPTFDLGWYADQCPDVLKAGIN----PLIHYIDHGKAGGFESGPN 242
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 43/153 (28%), Gaps = 14/153 (9%)
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+I DAN ++ R +D+ + S Y +Y
Sbjct: 122 DGRGSSLEIIESAERGKTTDANSAGVRRARNI---RESDRK-KVADSGLFSATYYLDTYA 177
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
D I V D HF + G EGR + TFD Y D+ HYI
Sbjct: 178 D-IAVAKIDPL---DHFMDQGWREGRRPNPTFDLGWYADQCPDVLKA----GINPLIHYI 229
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
HG G + A +
Sbjct: 230 DHGKAGGFESGPNPIIFEAARKMIAEAGAIEPS 262
>gi|329848973|ref|ZP_08264001.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844036|gb|EGF93605.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 754
Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats.
Identities = 100/650 (15%), Positives = 179/650 (27%), Gaps = 107/650 (16%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDV--------LTTHRLSFDITELNPNAQEVARWAL 59
++ + D +L W+ + Y LN + AR+AL
Sbjct: 14 FSGNQDIDAVLFGTKWTTTNLTYSFPTDAAFYQTPYYDQTYLDTFEVLNTLQKAGARYAL 73
Query: 60 GEWSKVVDLTFEETSIH----SDIKFISSNNG------YVCTPRYDSRYFMEINFDKADV 109
L+F E + +I+ +++ + + +
Sbjct: 74 SLVYGYTLLSFTEVTESATTHGNIRIAQNDSSNLESAEANFPGSETWDGDIWMGKWGNEP 133
Query: 110 WRYGIGKGTILSHNALHEIGHALGLMHPGS-------------YNGGYPVYGVDNDYEND 156
+ G LHEIGH+LGL H S G +D
Sbjct: 134 FYETPQIGNWGQATLLHEIGHSLGLKHGHSDYTTLDLTIGGYIDGPGPRYGTRALPAAHD 193
Query: 157 SFLTSVMSYFMPQDSM----MDASFGYCATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEV 211
+ S+M+Y +F T M +DI A+Q +YGA + N+ Y
Sbjct: 194 GWAWSLMTYRSSPSVGDPSFQGDAFNQPQTFMQNDIAALQYMYGAYFGHNASNSTYTFNN 253
Query: 212 QQ--------------------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+TI+D G D D + G + IDL WS
Sbjct: 254 FTGEMFINGVSQGMPAQDSLRNNGGKIFRTIWDGNGIDTYDFSNFTGNQ-TIDLAPGGWS 312
Query: 252 SIG---------------GYEKNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFF 290
+ N+ A ++IE+ G SGND + GN ANN
Sbjct: 313 MMNAAQLADLYPLYFENPTPPGNVANALLYNNDTRSLIENANGGSGNDFLFGNLANNALH 372
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ GND G D+ F + ++++ N++ D + + +
Sbjct: 373 GNGGNDQLLSGDGHDSLFGGTGNDTLSAAVGDDSLSGEGGNDY-LDGATGNDTIYAGLDQ 431
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD---------- 400
+V ++ + L G D G D
Sbjct: 432 DAAVGGIGNDYIDGEDGDDTLSGDDGNDYLNGGTGIDSLTGGSGNDSFVVDSVFDVVVEL 491
Query: 401 -----SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG-----------RNPDAFKALE 444
+Y L + F + + + G N
Sbjct: 492 NGGGIDLVYASVNFTLASHFENLTLLGSVGFSATGNAANNLIYGNSGGNQLNGAGGFDTV 551
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
Y +D+I++ + G D + D +L + +
Sbjct: 552 YGLGGDDVISSSSAGYYDAGTGNDTVYAGSGSNETLIGGDGIDFLDATGTTGAYDINLNT 611
Query: 505 AAARHYITH--GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
A G + + A+ ++ + + + + G D
Sbjct: 612 GATSFAGESFTGFEHVNSGSGNNAITGNGANNTINSNAGNDTVYAEGGSD 661
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 46/364 (12%), Positives = 89/364 (24%), Gaps = 26/364 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
Q +++ G+D L + + + G N TI
Sbjct: 375 GGNDQLLSGDGHDSLFGGTGNDTLSAAVGDDSLS----GEGGNDYLDGATGNDTIYAGLD 430
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS-------YLYKIYR 320
++ VG GND + G ++ GND +G +G+D+ + + +
Sbjct: 431 QDAAVGGIGNDYIDGEDGDDTLSGDDGNDYLNGGTGIDSLTGGSGNDSFVVDSVFDVVVE 490
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCI-DSVNVKQRSILEYTASYEDLIQVIGQDV 379
I S E L + +++ + L G D
Sbjct: 491 LNGGGIDLVYASVNFTLASHFENLTLLGSVGFSATGNAANNLIYGNSGGNQLNGAGGFDT 550
Query: 380 FESMKHFY--------EFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + G D + + L G D + G+
Sbjct: 551 VYGLGGDDVISSSSAGYYDAGTGNDTVYAGSGSNETLIGGDGIDFLDATGTTGAYDINLN 610
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
G + F+ + + + + A+ G D G +
Sbjct: 611 TGATSFAGESFTGFEHVNSGSGNNAITGNGANNTINSNAGNDTVYAEGGSDIVNGGAGDD 670
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
G G+ A Y G + ++ L L
Sbjct: 671 SLRGGTGSDILTAGTYASAGDVLYGDDGND-ALTSSGAGTYDGGTGNDTLTAGLGSNETL 729
Query: 547 VQAG 550
+
Sbjct: 730 IGGA 733
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 45/340 (13%), Positives = 84/340 (24%), Gaps = 13/340 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG- 133
+ D D G + + + G
Sbjct: 417 DGATGNDTIYAGLDQDAAVGGIGNDYIDGEDGDDTLSGDDGNDYLNGGTGIDSLTGGSGN 476
Query: 134 --LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+ ++ + G D S ++ S+F + F + I
Sbjct: 477 DSFVVDSVFDVVVELNGGGIDLVYASVNFTLASHFENLTLLGSVGFSATGNAANNLIYGN 536
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ +Y + S YD+G + G + I + +
Sbjct: 537 SGGNQLNGAGGFDTVYGLGGDDVISSSSAGYYDAGTGNDTVYAGSGSNETLIGGDGIDFL 596
Query: 252 SIGGYEKNMTIAQHTVIESVVGSS--GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G I +T S G S G + V S NN + N+ + ++G DT +
Sbjct: 597 DATGTTGAYDINLNTGATSFAGESFTGFEHVNSGSGNNAITGNGANNTINSNAGNDTVYA 656
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S A D L+ +A L ++
Sbjct: 657 EGGSD----IVNGGAGDDSLRGGTGSDILTAG---TYASAGDVLYGDDGNDALT-SSGAG 708
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
G D + E + ++ Y G+Y+
Sbjct: 709 TYDGGTGNDTLTAGLGSNETLIGGADTDLLNTASYSGAYN 748
>gi|188583181|ref|YP_001926626.1| glycosyl transferase group 1 [Methylobacterium populi BJ001]
gi|179346679|gb|ACB82091.1| glycosyl transferase group 1 [Methylobacterium populi BJ001]
Length = 1264
Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 75/216 (34%), Gaps = 31/216 (14%)
Query: 399 FDSYLYLGSYDDLRN-VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD Y+ Y ++ G +HY+ HGV G +P F YI + D++ A
Sbjct: 28 FDRAHYITKYPEVARLAKGDSNFDPVKHYMQHGVAAGYDPHPEFSTSYYIQLNPDVVAAN 87
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR-----NVFGSDRGAAARHYI 511
+ H+ +G EEGR S + +R + +D G YI
Sbjct: 88 QNPFF-------HYIMYGAEEGRRPKHGKEFIALSGEIVRGQTDSSTAFTDTGGEIYDYI 140
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNP 569
F A Y + + D+ P H+ G EGR + F+
Sbjct: 141 K---------GEFDADYYKSKYNDIEAHCEINPGF--DCVHHYIECGAAEGRDPSRVFST 189
Query: 570 DLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
YL D+ N H++ HG EGR
Sbjct: 190 QHYLEVNSDVRNA----SINPFYHFVKHGQTEGRTG 221
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 71/223 (31%), Gaps = 50/223 (22%)
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT- 398
+ +R ++ + K T E G F+ +KH+ + G++ G D
Sbjct: 10 NFKRDGYSRFQYKIIANKFDRAHYITKYPEVARLAKGDSNFDPVKHYMQHGVAAGYDPHP 69
Query: 399 -FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-------------------- 437
F + Y+ D+ HYI +G +EGR P
Sbjct: 70 EFSTSYYIQLNPDVVAAN----QNPFFHYIMYGAEEGRRPKHGKEFIALSGEIVRGQTDS 125
Query: 438 ----------------DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
F A Y + + D+ P H+ G EGR
Sbjct: 126 STAFTDTGGEIYDYIKGEFDADYYKSKYNDIEAHCEINPGF--DCVHHYIECGAAEGRDP 183
Query: 482 T--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
+ F + YL D+RN + H++ HG EGR +
Sbjct: 184 SRVFSTQHYLEVNSDVRNASIN----PFYHFVKHGQTEGRTGN 222
>gi|113954849|ref|YP_730469.1| type I secretion target GGXGXDXXX repeat-containing protein
[Synechococcus sp. CC9311]
gi|113882200|gb|ABI47158.1| type I secretion target GGXGXDXXX repeat protein [Synechococcus sp.
CC9311]
Length = 619
Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats.
Identities = 94/467 (20%), Positives = 163/467 (34%), Gaps = 98/467 (20%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
R + + + P ++ FD LNP QE+ R S +D+TF
Sbjct: 144 RAGQVIKYNLTGGYSHWDHNPQQQFGNKNDFDGLSLNPERQELLRSVFKYLSNTLDITFI 203
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN-----------------FDKADVWRYGI 114
E + +D I N+ + F ++N + +
Sbjct: 204 EDNTFTDFDNILENDINPYSEYDGYISFGDVNEVNYASKRQMLERRFCIINIDNTINPSG 263
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGG--------YPVYGVDNDYENDSFLTSVMSYF 166
G G+ +ALHEIGHALGL HPGSYN + ++ ND+ + ++MSYF
Sbjct: 264 GVGSNAWTDALHEIGHALGLSHPGSYNYDPDPESENHNVTFERMAEFYNDTNMLTLMSYF 323
Query: 167 MPQDSMMD----------ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI------- 209
P +++ AT M +D +A++ Y K + + +
Sbjct: 324 KPNNNLGGLGSLENPNIFGPHMKQATLMPADFIALRGRYEIQKNNAAHGDWNEKKIIGVN 383
Query: 210 -------------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES------- 249
E Q S + T + +D +D + + IDL +
Sbjct: 384 TTITNEDPIWNQVESQISTSRYFYTQVANHNEDTVDFSNTTEDQK-IDLRVTTGDNYDAF 442
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE------------------ 291
WS+IGG +KN+ ++ ++ E SG+D++IGN+ANN F
Sbjct: 443 WSNIGGNKKNLAFSEVSIFEVAKSGSGDDILIGNNANNALFGNDGDDHLIGWGGDDDLSG 502
Query: 292 SSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
GND G +G D + + + ++Y +
Sbjct: 503 GQGNDELFGGTGNDLIIAGEGDDYLSGSTGINEMYGGVGKDTFVLTQGSGHST---IHDF 559
Query: 345 RFADQCIDSVNVK----QRSILEYTAS---YEDLIQVIGQDVFESMK 384
D I + + L+ AS DL+ ++ +++
Sbjct: 560 SGIDDQIKLGDGGESISIINNLDGNASIYQNGDLLGIVNAKSANALE 606
>gi|329848979|ref|ZP_08264007.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844042|gb|EGF93611.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1192
Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats.
Identities = 86/451 (19%), Positives = 151/451 (33%), Gaps = 76/451 (16%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDV--------LTTHRLSFDITELNPNAQEVARWAL 59
++ ++ D +L W++ + + D N + AR+A
Sbjct: 18 FSGDQSIDAVLIGSRWTDTDLTFSFPSSGAYYDTPYYDSGYLADHVVFNTVQKGAARYAF 77
Query: 60 GEWSKVVDLTFEETSIH----SDIKFISSNNGYVCTPRY----DSRYFMEINFDKADVWR 111
+ LTF E + + I+ +N+ + +R+ ++ D
Sbjct: 78 ALIAGYSLLTFNEVTETEATHATIRLSQTNDASLEAAEGNFPGSNRWDGDVWLGLTDQPF 137
Query: 112 Y-GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD-------------NDYENDS 157
Y G LHEIGH +GL H S Y + D D D+
Sbjct: 138 YLTPQVGNWGMTTILHEIGHTMGLKHGHSDYTTYDLTDDDYVDKPGPRFGTRALDAAEDN 197
Query: 158 FLTSVMSYFMPQDSMMDASF---GYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQ 213
+ SVM+Y D T M +DI A+Q +YGA G + GN Y ++
Sbjct: 198 WAHSVMTYRSASGYDTDFQGDEFNQPQTYMQNDIAALQYLYGANFGFNSGNTTYTFDIGT 257
Query: 214 KD------------------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ +T++D G D + + ++ IDLN +WS++
Sbjct: 258 GEMFVDGVGQGTPELNVFGKGLIFRTVWDGNGVDTYNFSNFYTHQS-IDLNPGAWSTMSS 316
Query: 256 YE----------------KNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFESS 293
N+ A ++IE+ G SG+D ++GN A N +
Sbjct: 317 GNLVDLRPKDDSEDPLAPGNLANALLFEGDTRSLIENAKGGSGHDTIVGNQAANTLDGNG 376
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G+D +G +G D + ++ + D + S + L D
Sbjct: 377 GSDTINGGTGNDWLYGDTGLDTLNGGSGDDDVFGGDGKDALYG-ASGNDFLNGDDDDDQL 435
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ L A + L+ G D +
Sbjct: 436 LGEAGNDYLNGGAGSDILVGSTGNDTYVVDD 466
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 69/536 (12%), Positives = 127/536 (23%), Gaps = 48/536 (8%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ FE + ++ N + + AD G G T+ + A
Sbjct: 610 VNFENVNAGEQNDVVNGN-AVANLIYGNGGNDSLVGGGGADSLYGGDGHDTLDTGVAESN 668
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
A G ND + + + T D
Sbjct: 669 DNFADGGA-GDDAIWSSGEGTYAGGLGNDYIRAGLTAGLAEVLDGGEGLDTLDTTSYQLD 727
Query: 188 IVAVQK------------------IYGAPKGSLGNN------IYKIEVQQKDSPFIQTIY 223
V + G +G + T+
Sbjct: 728 YVLNLSTGLTHIAFEDFDNFEHAVLGGGNDSVIGTDASNNISTGMGNDSVDGGAGADTLT 787
Query: 224 DSGGDDLLDLTLI-------GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
GDD+ + G N + ++ S+S G + +T+ + I + G+
Sbjct: 788 GGAGDDIYVVDSSADHVIETTGNGNDVIRSSVSYSLAGRVVETLTLTGNANI-NATGNGN 846
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+ + GN+ NNV S GND G G D+++ E ++ A
Sbjct: 847 GNRLNGNAGNNVLDGSIGNDTLTGGLGNDSYYVSTAGDSVVEAAGEGTDTIFSAITLSLA 906
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
D ++++ ++L L G D G D
Sbjct: 907 GRQVENLTLLGDTALNAIGNGVGNVLTGNNGGNVLDGGGGHDRLNGGLGADSLIGGTGSD 966
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS--HEDLIN 454
+ G G+D ++ + E A+ + + L
Sbjct: 967 TY--VVDHAGDTVTELAGGGTDLVESSISFTLGAQVEQLTLTGAAAINGTGNDLNNVLTG 1024
Query: 455 AFADAPDLVQVGKDHFSNFGCE----EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
A+ +G D + E D +Y + +
Sbjct: 1025 NGANNILSGGLGNDTYFVQNTGDNVVEAGGAGSDVIYSTVTYSLNGRFAEAIYLKGEANI 1084
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
G + + L G D F +I
Sbjct: 1085 DATGNSLANQLVGN------SGNNVLNGKGGADTVTGGFGADVFLFQTGSGADTIN 1134
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 71/504 (14%), Positives = 126/504 (25%), Gaps = 58/504 (11%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S + + A+ G TI + GL +G V+G D
Sbjct: 356 GGSGHDTIVGNQAANTLDGNGGSDTINGGTGNDWLYGDTGLDTLNGGSGDDDVFGGDGKD 415
Query: 154 END--SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
S + + +A Y SDI+ GS GN+ Y ++
Sbjct: 416 ALYGASGNDFLNGDDDDDQLLGEAGNDYLNGGAGSDILV---------GSTGNDTYVVDD 466
Query: 212 QQKDSPFIQTIYDSGGDDLLDL----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
GG DL+ TL + L + G N+
Sbjct: 467 IGD----YLFEAAGGGSDLVYAYVSETLAANFEQLTLLGGGNIDGTGNSISNVINGNGYN 522
Query: 268 IESVVGSSGNDVVIGNSANNVFF-ESSGNDVFDGSSGLDTFFYYAPSYLY---------- 316
+ G G D + GN ++ + + N +G +G DT
Sbjct: 523 NILLGGGGGIDTINGNGGDDYIWNTNYANHALNGGTGNDTIGGAFAYGGTWDGGTEVDLV 582
Query: 317 -----KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
N + A + + E + +Q +++ + L
Sbjct: 583 DMTLHNWAATYNLTVGTYATSVGTLNIVNFENVNAGEQNDVVNGNAVANLIYGNGGNDSL 642
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+ G D S D+ + D + T+
Sbjct: 643 VGGGGADSLYGGDGHDTL-----------DTGVAESNDNFADGGAGDDAIWSSGEGTYAG 691
Query: 432 KEGRNPDAFKALEYIASHEDLINAFAD-APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
G + +A D Q+ + G F FD++ +
Sbjct: 692 GLGNDYIRAGLTAGLAEVLDGGEGLDTLDTTSYQLDYVLNLSTGLTHIAFEDFDNFEHAV 751
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+V G+D +++ A + L D +V +
Sbjct: 752 LGGGNDSVIGTDASNNIS-----------TGMGNDSVDGGAGADTLTGGAGDDIYVVDSS 800
Query: 551 KDHFSNFGYEEGRSITFNPDLYLT 574
DH I + L
Sbjct: 801 ADHVIETTGNGNDVIRSSVSYSLA 824
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 52/397 (13%), Positives = 102/397 (25%), Gaps = 39/397 (9%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G + + + + S MS D P A
Sbjct: 289 GVDTYNFSNFYTHQSIDLNPGAWSTMSSGNLVDLRPKDDSEDPLAPGNL----------A 338
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNTESWSS 252
+ + K TI + + LD G N +
Sbjct: 339 NALLFEGDTRSLIENAKGGSGHDTIVGNQAANTLDGNGGSDTINGGTGNDWLYGDTGLDT 398
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + +++ G+SGND + G+ ++ +GND +G +G D
Sbjct: 399 LNGGSGDDDVFGGDGKDALYGASGNDFLNGDDDDDQLLGEAGNDYLNGGAGSDILVGSTG 458
Query: 313 SYLYKI-------YRFENAIIVYDANEHKQDFLSDVERLR-FADQCIDSVNVKQRSILEY 364
+ Y + + + ++ E+L ID +++
Sbjct: 459 NDTYVVDDIGDYLFEAAGGGSDLVYAYVSETLAANFEQLTLLGGGNIDGTGNSISNVING 518
Query: 365 TA---------SYEDLIQVIGQDVFESMKHFYEFG--LSEGRDITFDSYLYLGSYDDLRN 413
D I G D + ++ G D ++ Y G++D
Sbjct: 519 NGYNNILLGGGGGIDTINGNGGDDYIWNTNYANHALNGGTGNDTIGGAFAYGGTWD---G 575
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FS 471
D H A + + +NA + + +
Sbjct: 576 GTEVDLVDMTLHNWAATYNLTVGTYATSVGTLNIVNFENVNAGEQNDVVNGNAVANLIYG 635
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
N G + LY G D + ++
Sbjct: 636 NGGNDSLVGGGGADSLYGGDGHDTLDTGVAESNDNFA 672
Score = 40.2 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 50/158 (31%), Gaps = 8/158 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-------KNYIDLNTESWSSIGGYEKNMT 261
+ + + G+D + G + + +T ++S G + + +
Sbjct: 1018 LNNVLTGNGANNILSGGLGNDTYFVQNTGDNVVEAGGAGSDVIYSTVTYSLNGRFAEAIY 1077
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ I+ G+S + ++GNS NNV G D G G D F + S I F
Sbjct: 1078 LKGEANID-ATGNSLANQLVGNSGNNVLNGKGGADTVTGGFGADVFLFQTGSGADTINDF 1136
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
A +++ + +
Sbjct: 1137 SAADNDSIHVNAYTGGVANNALVVQNGLNVVINLGGGN 1174
>gi|148548364|ref|YP_001268466.1| heme peroxidase [Pseudomonas putida F1]
gi|148512422|gb|ABQ79282.1| Animal haem peroxidase [Pseudomonas putida F1]
Length = 3619
Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats.
Identities = 55/362 (15%), Positives = 110/362 (30%), Gaps = 41/362 (11%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + + +L ++ ++ E + F + N T
Sbjct: 3256 DTFLVDNAGDTVTEALNGGTDQVQTSLASYTLGANV--ENLTYTGSSAFTGTGNALANTL 3313
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + AD G+G T + +A + A G
Sbjct: 3314 TGGAGNDLLNGGAGADRLVGGVGNDTYVVDDAGDVVVEATG------------------- 3354
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D T++ S+ + A G + +A GA +L +
Sbjct: 3355 AGTDLVRTTLASHTTTANVENLAYTGVGNFTGTGNGLANIIDGGAGNDTLSGD--GGNDV 3412
Query: 213 QKDSPFIQTIYDSGGDDLL--------------DLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ T+ G+D L D +L G N L ++ G
Sbjct: 3413 LNGNAGNDTLNGDAGNDQLFGGLGDDQLRGGGGDDSLDAGGGNDTLLGEAGNDNLNGGAG 3472
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ ++ +++ G GND + G+ + +GND +G++G DT + +
Sbjct: 3473 DDSLDGGNGNDTLQGGDGNDTLFGDVGTDTLIGGAGNDFLNGAAGNDTVV--GGAGNDTL 3530
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + A D + + + + Q + + + AS I +G D
Sbjct: 3531 IATDGNDVFQFAAGFGNDLIINFDAIAAGGQDRLDITALNITAATFGAS--VTIADVGAD 3588
Query: 379 VF 380
Sbjct: 3589 TL 3590
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/315 (14%), Positives = 82/315 (26%), Gaps = 28/315 (8%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA + G V + + L N +L S+ G
Sbjct: 3245 GADAMNGGAGNDTFLVDNAGDTVTEALNGGTDQVQTSLASYTLGANVENLTYTGSSAFTG 3304
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + ++ G +GND++ G + + GND + +
Sbjct: 3305 T-------GNALANTLTGGAGNDLLNGGAGADRLVGGVGNDT----------YVVDDAGD 3347
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
+ + ++VE L + +I++ A + L
Sbjct: 3348 VVVEATGAGTDLVRTTLASHTTTANVENLAYTGVGNFTGTGNGLANIIDGGAGNDTLSGD 3407
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G DV G D F D L G DD + G + G
Sbjct: 3408 GGNDVLNGNAGNDTLNGDAGNDQLFGGLGDDQLRGGGGDDSLDAGGGNDTLL----GEAG 3463
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE--GRFVTFDSYLY 488
+L+ ++ L + VG D + D+ +
Sbjct: 3464 NDNLNGGAGDDSLDGGNGNDTLQGGDGNDTLFGDVGTDTLIGGAGNDFLNGAAGNDTVVG 3523
Query: 489 LGSYDDLRNVFGSDR 503
D L G+D
Sbjct: 3524 GAGNDTLIATDGNDV 3538
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 59/185 (31%), Gaps = 18/185 (9%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + I +++E ++ G N I + + G +G+D++ ++ GND
Sbjct: 2448 GTNGDDILVSSEGDDTVWGDAGNDRIEGGDGNDQLRGGAGDDIISDMGGDDNIQGGDGND 2507
Query: 297 VFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----DVERLR 345
V G +G++ F + + + + ++QD + +E+
Sbjct: 2508 VLHGGNGINLIIGGFGNDFIVTGEDASEAIGGQGNDFILGSKANEQDMGNEGDDWIEKGT 2567
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
D+ + + + + D F S G F
Sbjct: 2568 SDGAPGDNFDPLGNDPI---IGNDVFVGGNENDKFNGEGGDDIMVGSLG----FGDRYIG 2620
Query: 406 GSYDD 410
GS D
Sbjct: 2621 GSGYD 2625
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/387 (13%), Positives = 99/387 (25%), Gaps = 32/387 (8%)
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
G T + I + + + T + G+ L +
Sbjct: 3092 GQTLTALTGAIADIDGLGAFSFQWQQGTGGTFADIAGATAATFTPGFAQGNQQLRVI--- 3148
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
Y D S +T+ V +VG++G + + G + N+V GND
Sbjct: 3149 --VRYTDGFGTLESLTSAATAAVTVPPGVV---LVGTNGANTLTGGAGNDVISGLGGNDT 3203
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+G G D F + ++ + E D L+
Sbjct: 3204 LNGLGGSDQLF--GGIGNDILNGGDDPD--FLNGEDGNDTLNG------GLGADAMNGGA 3253
Query: 358 QRSILEYTASYEDLIQVI--GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ + + + + G D ++ Y G + S + G+ + L N
Sbjct: 3254 GNDTFLVDNAGDTVTEALNGGTDQVQTSLASYTLGANVENLTYTGSSAFTGTGNALANTL 3313
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
G + + + A + A + H +
Sbjct: 3314 TGGAGNDLLNGGAGADRLVGGVGNDTYVVDDAGDVVVEATGAGTDLVRTTLASHTTTANV 3373
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
E +Y + N G+ G A G L A ++
Sbjct: 3374 EN------------LAYTGVGNFTGTGNGLANIIDGGAGNDTLSGDGGNDVLNGNAGNDT 3421
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEG 562
L + G D G ++
Sbjct: 3422 LNGDAGNDQLFGGLGDDQLRGGGGDDS 3448
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/182 (11%), Positives = 51/182 (28%), Gaps = 12/182 (6%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ E ++ + + ++ S G+D + G++ +++ +GND G +G D
Sbjct: 903 GPDGNFLHYTGEDHVVLGGTAGNDIIISSEGDDTLYGDAGDDLLEGGAGNDAVLGGAGDD 962
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDAN---EHKQDFLSDVERLRFADQCIDSV-NVKQRSI 361
++ ++ + D + + I +
Sbjct: 963 II--TDSFGDNRLEGNAGNDVIVAGSMGVAGNLILGGDGQDFIITTEDISTTFGGLGDDF 1020
Query: 362 LEYTASYEDLIQVIGQD-----VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ + G D + F G ++ + G D G
Sbjct: 1021 ILGAKTNLPPTGNEGDDWIEKGTQDGAPG-DNFAPLLGDEVIGNDIFVGGGGFDEMIGEG 1079
Query: 417 SD 418
D
Sbjct: 1080 GD 1081
Score = 38.2 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSV 354
+ G+ DT Y S Y + N++ V D A D L+ +ERL+F+D S
Sbjct: 2792 ILSGTDDYDTAVYSGVSTDYSVVVDGNSVTVTDLVAGRDGVDHLTGIERLQFSDSSQASG 2851
Query: 355 NVKQRSI 361
+
Sbjct: 2852 VGTAVNA 2858
>gi|33866440|ref|NP_897999.1| Zn-dependent metalloprotease [Synechococcus sp. WH 8102]
gi|33633218|emb|CAE08423.1| Possible Zn-dependent metalloprotease [Synechococcus sp. WH 8102]
Length = 391
Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats.
Identities = 69/332 (20%), Positives = 119/332 (35%), Gaps = 48/332 (14%)
Query: 78 DIKFISSNNGYVCTPRYDSR----YFMEINFDKAD-VWRYGIGKGTILSHNALHEIGHAL 132
D + + G+ TP DS + AD ++ I G+ LHE+ HA+
Sbjct: 35 DQRQSEGSYGFAYTPGTDSDEGLVAINWSTYQNADGSFKNSIASGSFYGITFLHELSHAV 94
Query: 133 GLMHPGS----YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS------------ 176
GL HP +P ++ D ++ Q + +D
Sbjct: 95 GLKHPHDRGLFGQPRFPGLTHRSNEFRDKGDFDQNAHPFTQLTYVDKGARNGMVPRSIEA 154
Query: 177 FGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL 235
+G+ T DI A+Q +YG + G++ Y + ++ ++ + I+D+GG D +
Sbjct: 155 YGFLQTLGALDIAALQWMYGINPDAASGDDTYTLPLENREGTGWRAIWDTGGVDRI-TAG 213
Query: 236 IGGVKNYIDLN----------TESWSSIGGYEKNMTIAQH------------TVIESVVG 273
IDL S TIA VIE +G
Sbjct: 214 GATAPVTIDLRNATLGDDVNAGGYVSRAEDVFGGFTIAHDWYGRNVGQSAGLCVIEIAIG 273
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGL-DTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+DV+IGN A+N+ G DV G + + I A++
Sbjct: 274 GKGDDVLIGNRADNLLKGKKGADVLVAGGGDGNRVTGGKGRDQFWISAQHGALVKVTDFN 333
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
++D L V + + +DSV + +++
Sbjct: 334 PRKDRL--VFDVDVSAVTLDSVGNGSQVLIDG 363
>gi|26989281|ref|NP_744706.1| heme peroxidase [Pseudomonas putida KT2440]
gi|24984130|gb|AAN68170.1|AE016449_1 secreted hemolysin-type calcium-binding bacteriocin, putative
[Pseudomonas putida KT2440]
Length = 3619
Score = 120 bits (300), Expect = 8e-25, Method: Composition-based stats.
Identities = 56/362 (15%), Positives = 111/362 (30%), Gaps = 41/362 (11%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + + +L ++ ++ E + F + N T
Sbjct: 3256 DTFLVDNAGDTVTEALNGGTDQVQTSLASYTLGANV--ENLTYTGSSAFTGTGNALANTL 3313
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + AD G+G T + +A + A G
Sbjct: 3314 TGGAGNDLLNGGAGADRLVGGVGNDTYVVDDAGDVVVEATG------------------- 3354
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D T++ S+ M + A G + +A GA +L +
Sbjct: 3355 AGTDLVRTTLASHTMAANVENLAYTGVGNFTGTGNGLANIIDGGAGNDTLSGD--GGNDV 3412
Query: 213 QKDSPFIQTIYDSGGDDLL--------------DLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ T+ G+D L D +L G N L ++ G
Sbjct: 3413 LNGNAGNDTLNGDAGNDQLFGGLGDDQLRGGGGDDSLDAGGGNDTLLGEAGNDNLNGGAG 3472
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ ++ +++ G GND + G+ + +GND +G++G DT + +
Sbjct: 3473 DDSLDGGNGNDTLQGGDGNDTLFGDVGTDTLIGGAGNDFLNGAAGNDTVV--GGAGNDTM 3530
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + A D + + + + Q + + + AS I +G D
Sbjct: 3531 IATDGNDVFQFAAGFGNDLIINFDAIAAGGQDRLDITALNITAATFGAS--VTIADVGAD 3588
Query: 379 VF 380
Sbjct: 3589 TL 3590
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/370 (14%), Positives = 92/370 (24%), Gaps = 40/370 (10%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA + G V + + L N +L S+ G
Sbjct: 3245 GADAMNGGAGNDTFLVDNAGDTVTEALNGGTDQVQTSLASYTLGANVENLTYTGSSAFTG 3304
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + ++ G +GND++ G + + GND + +
Sbjct: 3305 T-------GNALANTLTGGAGNDLLNGGAGADRLVGGVGNDT----------YVVDDAGD 3347
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
+ + ++VE L + +I++ A + L
Sbjct: 3348 VVVEATGAGTDLVRTTLASHTMAANVENLAYTGVGNFTGTGNGLANIIDGGAGNDTLSGD 3407
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G DV G D F D L G DD + G + G
Sbjct: 3408 GGNDVLNGNAGNDTLNGDAGNDQLFGGLGDDQLRGGGGDDSLDAGGGNDTLL----GEAG 3463
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+L+ ++ L + VG D D
Sbjct: 3464 NDNLNGGAGDDSLDGGNGNDTLQGGDGNDTLFGDVGTDTLIGG-------AGNDFLNGAA 3516
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
D + G+D A G D + + D I A + A
Sbjct: 3517 GNDTVVGGAGNDTMIATDGNDVFQFAAGFGND-------LIINFDAIAAGGQDRLDITAL 3569
Query: 551 KDHFSNFGYE 560
+ FG
Sbjct: 3570 NITAATFGAS 3579
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 59/185 (31%), Gaps = 18/185 (9%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + I +++E ++ G N I + + G +G+D++ ++ GND
Sbjct: 2448 GTNGDDILVSSEGDDTVWGDAGNDRIEGGDGNDQLRGGAGDDIISDMGGDDNIQGGDGND 2507
Query: 297 VFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----DVERLR 345
V G +G++ F + + + + ++QD + +E+
Sbjct: 2508 VLHGGNGVNLIIGGFGNDFIVTGEDASEAIGGQGNDFILGSKANEQDMGNEGDDWIEKGT 2567
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
D+ + + + + D F S G F
Sbjct: 2568 SDGAPGDNFDPLGNDPI---IGNDVFVGGNENDKFNGEGGDDIMVGSLG----FGDRYIG 2620
Query: 406 GSYDD 410
GS D
Sbjct: 2621 GSGYD 2625
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/387 (13%), Positives = 97/387 (25%), Gaps = 32/387 (8%)
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
G T + I + + + T + G+ L +
Sbjct: 3092 GQTLTALTGAIADIDGLGAFSFQWQQGTGGTFADIAGATAATFTPGFAQGNQQLRVI--- 3148
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
Y D S +T+ V +VG++ + + G + N+V GND
Sbjct: 3149 --VRYTDGFGTLESLTSAATAAVTVPPGVV---LVGTNAANTLTGTTGNDVISGLGGNDT 3203
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+G G D F + ++ + E D L+
Sbjct: 3204 LNGLGGSDQLF--GGIGNDILNGGDDPD--FLNGEDGNDTLNG------GLGADAMNGGA 3253
Query: 358 QRSILEYTASYEDLIQVI--GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ + + + + G D ++ Y G + S + G+ + L N
Sbjct: 3254 GNDTFLVDNAGDTVTEALNGGTDQVQTSLASYTLGANVENLTYTGSSAFTGTGNALANTL 3313
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
G + + + A + A + H
Sbjct: 3314 TGGAGNDLLNGGAGADRLVGGVGNDTYVVDDAGDVVVEATGAGTDLVRTTLASHTMAANV 3373
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
E +Y + N G+ G A G L A ++
Sbjct: 3374 EN------------LAYTGVGNFTGTGNGLANIIDGGAGNDTLSGDGGNDVLNGNAGNDT 3421
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEG 562
L + G D G ++
Sbjct: 3422 LNGDAGNDQLFGGLGDDQLRGGGGDDS 3448
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/182 (12%), Positives = 52/182 (28%), Gaps = 12/182 (6%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+S E ++ + + ++ S G+D + G++ +++ +GND G +G D
Sbjct: 903 GPDSNFLHYTGEDHVVLGGTAGNDIIISSEGDDTLYGDAGDDLLEGGAGNDAVLGGAGDD 962
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDAN---EHKQDFLSDVERLRFADQCIDSV-NVKQRSI 361
++ ++ + D + + I +
Sbjct: 963 II--TDSFGDNRLEGNAGNDVIVAGSMGVAGNLILGGDGQDFIITTEDISTTFGGLGDDF 1020
Query: 362 LEYTASYEDLIQVIGQD-----VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ + G D + F G ++ + G D G
Sbjct: 1021 ILGAKTNLPPTGNEGDDWIEKGTQDGAPG-DNFAPLLGDEVIGNDIFVGGGGFDEMIGEG 1079
Query: 417 SD 418
D
Sbjct: 1080 GD 1081
Score = 40.2 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 44/308 (14%), Positives = 78/308 (25%), Gaps = 17/308 (5%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
++ I ++ T D+ D D R G G I I
Sbjct: 2445 VLGGTNGDDILVSSEGDDTVWGDAGNDRIEGGDGNDQLRGGAGDDIISDMGGDDNIQGGD 2504
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--SDIVA 190
G NG + G + + + + + + S D +
Sbjct: 2505 GNDVLHGGNGVNLIIGGFGNDFIVTGEDASEAIGGQGNDFILGSKANEQDMGNEGDDWIE 2564
Query: 191 VQKIYGAPKGS---LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
GAP + LGN+ GGDD + + +G YI +
Sbjct: 2565 KGTSDGAPGDNFDPLGNDPIIGNDVFVGGNENDKFNGEGGDD-IMVGSLGFGDRYIGGSG 2623
Query: 248 ESWSSIGGYEKNMTIAQHTVIESV--VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
WS+ + ++I V V SG ++ S+ D G
Sbjct: 2624 YDWSTFKDLAQGVSIDMSDRFFDVPPVPGSGASTLVRFDIMEGLSGSAHGDFLRG----- 2678
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ ++ + + F D + +LE
Sbjct: 2679 ----DSEDATSLPTAGATGSVLTNISLIDGLAGLLAAGATFYDGGNIILGGSGSDLLEGR 2734
Query: 366 ASYEDLIQ 373
+ L
Sbjct: 2735 GGDDILDG 2742
Score = 39.0 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSV 354
+ G+ DT Y S Y + N++ V D A D L+ +ERL+F+D S
Sbjct: 2792 ILSGTDHYDTAVYSGVSTDYSVVVDGNSVTVTDLVAGRDGVDHLTGIERLQFSDSSQASG 2851
Query: 355 NVKQRSI 361
+
Sbjct: 2852 VGTAVNA 2858
>gi|163740883|ref|ZP_02148276.1| Alkaline metalloprotease precursor PrtA [Phaeobacter gallaeciensis
2.10]
gi|161385874|gb|EDQ10250.1| Alkaline metalloprotease precursor PrtA [Phaeobacter gallaeciensis
2.10]
Length = 409
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 68/301 (22%), Positives = 101/301 (33%), Gaps = 54/301 (17%)
Query: 67 DLTFEETSIHSD-------IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
++ F E SD + S G + A
Sbjct: 77 NVDFVEVQGSSDPDLNLGSVTIPGSTVGIGGYSMSFRGDDITRWDGYAVFDNMLDMSQDN 136
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
LHE+GHALGL H N E DS L SVMSY + D
Sbjct: 137 RESLILHELGHALGLQHTHDSN---------LPEEYDSNLYSVMSYRENPLNGQD----- 182
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
M+ D++A+Q I+GA + N Y+ + ++D+GG D + +
Sbjct: 183 SDAMMLFDVLALQDIWGAADFNTSNTTYRGSRT----DTVDVVWDTGGTDTFNASNRT-N 237
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG----- 294
+DL +SS ++TIAQ IE+ +G G D + GN ANN G
Sbjct: 238 AVTLDLREMHFSSFDADS-DVTIAQGVTIENAIGGRGRDRITGNDANNRLVGGGGRDTLR 296
Query: 295 ----------------------NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
ND +G+ G D + + L+ R + D +
Sbjct: 297 GDGGNDALNGNSGVDLLVGGGGNDRLNGAGGNDRLVGNSGADLFIFARKGGNDTIRDFQD 356
Query: 333 H 333
Sbjct: 357 D 357
>gi|307591965|ref|YP_003899556.1| peptidase M23 [Cyanothece sp. PCC 7822]
gi|306985610|gb|ADN17490.1| Peptidase M23 [Cyanothece sp. PCC 7822]
Length = 3503
Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats.
Identities = 71/393 (18%), Positives = 131/393 (33%), Gaps = 74/393 (18%)
Query: 7 VYTTERIADHLLRD------QYWSNYFIRYKPDVLTTHRLSF-----DITELNPNAQEVA 55
+ + D +LR W N + Y + + + E++ +
Sbjct: 1556 TPSGDYQIDGILRGEKEKWNFSWGNRKLTYSFYSHSVFNGDYSGGQTGVEEVSEGVKNNY 1615
Query: 56 RWALGEWSKVVDLTFEETSIH----SDIKFISSNNGYVCTPRYD--------SRYFMEIN 103
R V+++ F E + I+ + S++GY S ++
Sbjct: 1616 RKIFNWLENVINIDFVEVTESPNNYGRIRIVPSSSGYASAFGPTEDELYTVASDIYLNQT 1675
Query: 104 FDK-ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
FD+ D + G +HE+GHALG+ HP + + P + D+
Sbjct: 1676 FDRLGDGNGFQESAGYHGYAALIHELGHALGINHPNAKDVLIPPEELHYDHTLMGGYGGG 1735
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI--- 219
++ T M D+ A+Q +YGA + + N Y+ +
Sbjct: 1736 VA---------------PGTFMSYDLKALQYLYGAKQYNETNTTYQFSARTDKFSVNGQT 1780
Query: 220 ---------QTIYDSGGDDLLDLTLIGGVKN--YIDLNTESW----------------SS 252
Q ++DSGG D D + + + ++DL +
Sbjct: 1781 FLESPYQLKQLLWDSGGLDTFDFSNLTPNTSGYHLDLTPGGILTPQSDYNAGTYTVNGVT 1840
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS-----GNDVFDGSSGLDTF 307
IA + +IE+V+ SS ND + NSA N F S GND++ + DT
Sbjct: 1841 YYTSNYGTVIAYNVLIENVINSSSNDEIFANSAANTFKGYSPTRQTGNDIYWNTDSNDTL 1900
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
A ++ ++ + +
Sbjct: 1901 DLSAYYSSDVTQTKNGNDLLLKLAQNGTITVKN 1933
Score = 92.9 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/365 (14%), Positives = 97/365 (26%), Gaps = 27/365 (7%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNTESWSSIGG---------Y 256
T+ G+D + G D S I G
Sbjct: 2975 DNLDGQLGNDTMIGGDGNDTYTVDSSGDLIVENPNAGTDTVKTYLSYILGENLENLTLLG 3034
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N+ + + S+ G++GN+++ + N+ G+D G G D + S
Sbjct: 3035 ISNLNATGNNLNNSLTGNNGNNILTDSQGNDTLDGKGGDDTLIGGVGNDVYVVD--SIHD 3092
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVI 375
I + I +++E+L I+ V + L + LI
Sbjct: 3093 VIIENTDEGIDSVNASVSYTLSANLEKLTLTGTGNINGVGNNLNNTLTGNSGNNTLIGYE 3152
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D + D+ + + G+D A+ Y E
Sbjct: 3153 GNDSLDGKGGNDTLIGGLENDVYIVDS--IDDVITENSAEGTDSVNASVSYTLSANLEKL 3210
Query: 436 NPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY- 492
LE I + D L + G D + + +Y +
Sbjct: 3211 TLTGTGNLEGIGNSLDNTLTGNSGNNTLKGNEGNDSLDGKAGSDTLVGGSGNDVYTVDHI 3270
Query: 493 DDLRN---VFGSDRGAAARHYITHGVKEGRNPDA--FKALEYIASHEDLINAFADAPDLV 547
+D+ G+D A+ + E +S+ L
Sbjct: 3271 NDVITENLAEGTDSVNASVSFTLGDNLENLTLTGSSNLTGTGNSSNNTLTGNTGANILSA 3330
Query: 548 QAGKD 552
G D
Sbjct: 3331 GGGND 3335
Score = 81.0 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 59/437 (13%), Positives = 101/437 (23%), Gaps = 50/437 (11%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D G G T + + + +
Sbjct: 2970 GGPGADNLDGQLGNDTMIGGDGNDTYTV-------------------DSSGDLIVENPNA 3010
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK---IE 210
D+ T + SY + ++ G + + + G+ GNNI
Sbjct: 3011 GTDTVKTYL-SYILGENLENLTLLGISNLNATGN-----NLNNSLTGNNGNNILTDSQGN 3064
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNTESWSSIGGYEKNMTIAQH 265
T+ G+D+ + I ID S S
Sbjct: 3065 DTLDGKGGDDTLIGGVGNDVYVVDSIHDVIIENTDEGIDSVNASVSYTLSANLEKLTLTG 3124
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKI 318
T + VG++ N+ + GNS NN GND DG G DT Y S I
Sbjct: 3125 TGNINGVGNNLNNTLTGNSGNNTLIGYEGNDSLDGKGGNDTLIGGLENDVYIVDSIDDVI 3184
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQ----------CIDSVNVKQRSILEYTASY 368
+++E+L + L+
Sbjct: 3185 TENSAEGTDSVNASVSYTLSANLEKLTLTGTGNLEGIGNSLDNTLTGNSGNNTLKGNEGN 3244
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L G D + + D+ ++ + F
Sbjct: 3245 DSLDGKAGSDTLVGGSGNDVYTVDHINDVITENLAEGTDSVNASVSFTLGDNLENLTLTG 3304
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G + L L + G D + ++
Sbjct: 3305 SSNLTGTGNSSNNTLTGNTGANILSAGGGNDSVNGGNGDDTLYGGEGNNTLVGGAGNDVF 3364
Query: 489 LGSYDDLRNVFGSDRGA 505
G D R G+ +
Sbjct: 3365 EGGNGDDRLTGGAGSDS 3381
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/313 (14%), Positives = 86/313 (27%), Gaps = 36/313 (11%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIK-------FISSN 85
DV + I E + ++ ++ +L + +I +
Sbjct: 3083 DVYVVDSIHDVIIENTDEGIDSVNASV-SYTLSANLEKLTLTGTGNINGVGNNLNNTLTG 3141
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL------------- 132
N T D G+ + + I
Sbjct: 3142 NSGNNTLIGYEGNDSLDGKGGNDTLIGGLENDVYIVDSIDDVITENSAEGTDSVNASVSY 3201
Query: 133 -------GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
L G+ N +DN +S ++ A
Sbjct: 3202 TLSANLEKLTLTGTGNLEGIGNSLDNTLTGNSGNNTLKGNEGNDSLDGKAGSDTLVGGSG 3261
Query: 186 SDIVAVQKIYGAPKGSLGNNI--------YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+D+ V I +L + + ++ + +G + + TL G
Sbjct: 3262 NDVYTVDHINDVITENLAEGTDSVNASVSFTLGDNLENLTLTGSSNLTGTGNSSNNTLTG 3321
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
I S+ G + T+ ++VG +GNDV G + ++ +G+D
Sbjct: 3322 NTGANILSAGGGNDSVNGGNGDDTLYGGEGNNTLVGGAGNDVFEGGNGDDRLTGGAGSDS 3381
Query: 298 FDGSSGLDTFFYY 310
F G G++TF
Sbjct: 3382 FTGGGGVNTFVIN 3394
>gi|254463780|ref|ZP_05077191.1| type I secretion target repeat protein [Rhodobacterales bacterium
Y4I]
gi|206684688|gb|EDZ45170.1| type I secretion target repeat protein [Rhodobacterales bacterium
Y4I]
Length = 414
Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats.
Identities = 69/359 (19%), Positives = 107/359 (29%), Gaps = 62/359 (17%)
Query: 32 PDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCT 91
V + ++ + +E R AL E+ + + F ETS + I + G
Sbjct: 44 APVSSDPYGAYRYWAFDSQQREYFRRALDEFEEASGVIFVETSGPAMINVFGYDGGSAAG 103
Query: 92 PRYDSRYFMEINFDKADVWRYG-IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD 150
+ G I G+ LHEIGHALGL HP +
Sbjct: 104 WADYPWASSYSTNEGRLAIEGGNIMPGSFGYETVLHEIGHALGLKHPHDGD-------TT 156
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
D+ +VM+Y + Y D+ A+Q IYG+ G+ ++
Sbjct: 157 LADHLDTQANTVMTY--------SYAGYYVTELGTFDVQALQHIYGSSAGTAEWSV---- 204
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
SGG ++D + L S + G + T+ +
Sbjct: 205 -----------RVKSGGMVVIDTSAAAETV----LAVGQSSKVYGRGGSDTLIGREAGDK 249
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G +G D +IG + F G DV G D Y +
Sbjct: 250 LIGGAGLDTLIGGYGEDRLFGGKGADVLIGGLDDD--EYSGSTGEADKLVGGG------- 300
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D LS L + LI G D +H F
Sbjct: 301 ---GWDTLSG---------------GAGDDTLVGGNGRDRLIGGDGSDQLTGGRHADTF 341
>gi|149185644|ref|ZP_01863960.1| type I secretion target repeat protein [Erythrobacter sp. SD-21]
gi|148830864|gb|EDL49299.1| type I secretion target repeat protein [Erythrobacter sp. SD-21]
Length = 542
Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats.
Identities = 77/452 (17%), Positives = 126/452 (27%), Gaps = 50/452 (11%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ ++ G+D+L G N I + G N + +
Sbjct: 88 DRLYGGNGFDRLFGENGNDVL----FGDAGNDILRGGSGLDILWGGLDNDQLYGGADNDE 143
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +G D + G+ ++ G D +G+ G D F A S F A
Sbjct: 144 LNGEAGADRLFGDGGDDTIRGGDGQDFLNGAFGNDILFAGAGSDTA----FGGAGNDSVF 199
Query: 331 NEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D+L+ E L + L + + L + D
Sbjct: 200 GGIGWDYLTGNEGDDVLEGQNGNDVLDGGSGMDTLRGGSGNDTLRGGVDDDTLIGELGAD 259
Query: 388 EFGLSEGRDI----TFDSYLYLGSYDDLRNVFGSD----RGAAARHYITHGVKEGRNPDA 439
EG D+ D LY DDL + G + + + +
Sbjct: 260 TLEGGEGNDVLSGFDGDDQLYGEGGDDLIAAGSGNDAIFGGDGSDQIFANAGDDDVDGGV 319
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
+ Y A D + A + +D D D L F
Sbjct: 320 GADVIYGAEGLDHMFGGAGDDLIYGGTQDDLLFG------EAGNDELHGGADNDQLFGNF 373
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
G D Y G + A ++L AG D F
Sbjct: 374 GDDVL-----YGDAGNDVIFGLGDNDVIFGGAGSDELHGGNGSDTLNGGAGADLFI---I 425
Query: 560 EEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLS 619
++ + + S +DL +F S + + G ++ QF+
Sbjct: 426 QDTPNGDVDTIQDFASAEDLLVLFASAFN-----FNYDGF-------LNPDQFQLG---- 469
Query: 620 EKSRDKADLSLSFDHKKVDLYTDYFGDGNYYD 651
S D AD + +D DLY D G+G
Sbjct: 470 -TSADDADDRIIYDQATGDLYFDADGNGAAEQ 500
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/336 (13%), Positives = 100/336 (29%), Gaps = 11/336 (3%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ AD G TI + + A G + G +G +
Sbjct: 137 GGADNDELNGEAGADRLFGDGGDDTIRGGDGQDFLNGAFGNDILFAGAGSDTAFGGAGND 196
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ D +++ G S + ++ G G + +
Sbjct: 197 SVFGGIGWDYLTGNEGDDVLEGQNGNDVLDGGSGMDTLRGGSGNDTLRGGVD----DDTL 252
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
T+ G+D+L G + I N I + +
Sbjct: 253 IGELGADTLEGGEGNDVL----SGFDGDDQLYGEGGDDLIAAGSGNDAIFGGDGSDQIFA 308
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
++G+D V G +V + + G D G +G D + + ++ ++ ++
Sbjct: 309 NAGDDDVDGGVGADVIYGAEGLDHMFGGAGDDLIY--GGTQDDLLFGEAGNDELHGGADN 366
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
Q F + + + + D D + ++ A ++L G D F +
Sbjct: 367 DQLFGNFGDDVLYGDAGNDVIFGLGDNDVIFGGAGSDELHGGNGSDTLNGGAGADLFIIQ 426
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ + D+ S +DL +F S ++
Sbjct: 427 DTPNGDVDTIQDFASAEDLLVLFASAFNFNYDGFLN 462
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 52/316 (16%), Positives = 92/316 (29%), Gaps = 20/316 (6%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ N + + D R G G T+ + LG G
Sbjct: 208 TGNEGDDVLEGQNGNDVLDGGSGMDTLRGGSGNDTLRGGVDDDTLIGELGADTLEGGEGN 267
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ G D D + + + + G A G
Sbjct: 268 DVLSGFDGDDQLYGEGGDDLIAAGSGNDAIFGGDGSDQIF-------------ANAGDDD 314
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + ++ GDDL+ GG ++ + + G N +
Sbjct: 315 VDGGVGADVIYGAEGLDHMFGGAGDDLI----YGGTQDDLLFGEAGNDELHGGADNDQLF 370
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + + G +GNDV+ G N+V F +G+D G +G DT A + L+ I N
Sbjct: 371 GNFGDDVLYGDAGNDVIFGLGDNDVIFGGAGSDELHGGNGSDTLNGGAGADLFIIQDTPN 430
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + + L L + + + S +D I D
Sbjct: 431 GDVDTIQDFASAEDLL---VLFASAFNFNYDGFLNPDQFQLGTSADDADDRIIYDQATGD 487
Query: 384 KHFYEFGLSEGRDITF 399
+F G I F
Sbjct: 488 LYFDADGNGAAEQILF 503
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 63/252 (25%), Gaps = 3/252 (1%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ I G + T+ +++ G+D V N +++ + GND +G G D F
Sbjct: 15 YQQIVGTDDPETLEGTPEADTIEARGGDDTVNANLGDDLVYGGFGNDELNGEDGNDQLF- 73
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASY 368
+ ++ +Y N + F + + F D D + IL
Sbjct: 74 -GEAGFDLLFGGTGFDRLYGGNGFDRLFGENGNDVLFGDAGNDILRGGSGLDILWGGLDN 132
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L D G D N + +
Sbjct: 133 DQLYGGADNDELNGEAGADRLFGDGGDDTIRGGDGQDFLNGAFGNDILFAGAGSDTAFGG 192
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G + L + L + G D + D
Sbjct: 193 AGNDSVFGGIGWDYLTGNEGDDVLEGQNGNDVLDGGSGMDTLRGGSGNDTLRGGVDDDTL 252
Query: 489 LGSYDDLRNVFG 500
+G G
Sbjct: 253 IGELGADTLEGG 264
>gi|255590871|ref|XP_002535385.1| conserved hypothetical protein [Ricinus communis]
gi|223523278|gb|EEF26996.1| conserved hypothetical protein [Ricinus communis]
Length = 413
Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats.
Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 184 MVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
MV+DI A+Q +YGA G+N Y + PF+ TI+D+GG+D + + +
Sbjct: 1 MVNDIAAIQYLYGANTSYQTGSNTYTFDPTT---PFLHTIWDAGGNDTISIANFTVG-SV 56
Query: 243 IDLNTESWSSI---------------------GGYEKNMTIAQHTVIESVVGSSGNDVVI 281
IDL +SS+ N+ IA IE+ +G SGND +I
Sbjct: 57 IDLQAGHYSSLRMAPEQSPAGIVWNTAPPATTYDGTNNLGIAYGVTIENAIGGSGNDTLI 116
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY-DANEHKQDFLSD 340
GN+ N + G + DG +G+DT Y Y + N IV N + D L++
Sbjct: 117 GNAVANHLQGNGGANTLDGGAGIDTAVYTGNFSSYALATNGNGYIVTLQNNPSQTDTLTN 176
Query: 341 VERLRFADQCIDSVNVKQRS 360
+ERL FAD +
Sbjct: 177 IERLSFADASMALNVGSLAE 196
>gi|226328851|ref|ZP_03804369.1| hypothetical protein PROPEN_02752 [Proteus penneri ATCC 35198]
gi|225202037|gb|EEG84391.1| hypothetical protein PROPEN_02752 [Proteus penneri ATCC 35198]
Length = 264
Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 89/227 (39%), Gaps = 21/227 (9%)
Query: 180 CATPMVSDIVAVQKIYGAPK-GSLGNNIYKIEVQQ---------KDSPFIQTIYDSGGDD 229
TP + DI A+Q+ YG K +GN IY + + I+D+GG D
Sbjct: 3 PLTPQLMDICAIQETYGQNKATRIGNTIYGFNSNTKKDYYSLKTSEDKIVACIWDTGGID 62
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LD + + IDLN S+S +GG N++IA VIE+ +G S D++ GN ANN
Sbjct: 63 TLDFSKYTVDQK-IDLNEGSFSDVGGLRANISIAYDAVIENAIGGSQTDIISGNDANNRL 121
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
F G D G G D + +Y + +Y ++ L +D
Sbjct: 122 FGKLGEDTLYGKGGNDILY--GGQGNDHLYGEKGNDYLYGEQDNDV--------LVDSDG 171
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ L + L +G DV E EG D
Sbjct: 172 NDHLYGGQGDDYLWDSEGDNILDGGLGDDVLFGGDGDDELNGGEGND 218
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 5/120 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNMTI 262
+Y G+D L V D N + + E + +
Sbjct: 134 GGNDILYGGQGNDHLYGEKGNDYLYGEQDNDVLVDSDGNDHLYGGQGDDYLWDSEGDNIL 193
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G G+D + G N+ GN+ G +G DTF + +
Sbjct: 194 DGGLGDDVLFGGDGDDELNGGEGNDHLDPGMGNNTLKGGTGYDTFSFNTQDNDSSNIITD 253
Score = 40.9 bits (94), Expect = 0.67, Method: Composition-based stats.
Identities = 26/197 (13%), Positives = 49/197 (24%), Gaps = 7/197 (3%)
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ G+DT + + KI E + L + + +++
Sbjct: 55 IWDTGGIDTLDFSKYTVDQKIDLNEGSFSDVGG-------LRANISIAYDAVIENAIGGS 107
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
Q I+ + L +G+D +G D + Y + N
Sbjct: 108 QTDIISGNDANNRLFGKLGEDTLYGKGGNDILYGGQGNDHLYGEKGNDYLYGEQDNDVLV 167
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D Y G + + L+ + L D G DH
Sbjct: 168 DSDGNDHLYGGQGDDYLWDSEGDNILDGGLGDDVLFGGDGDDELNGGEGNDHLDPGMGNN 227
Query: 478 GRFVTFDSYLYLGSYDD 494
+ + D
Sbjct: 228 TLKGGTGYDTFSFNTQD 244
>gi|254474557|ref|ZP_05087943.1| hypothetical protein RR11_392 [Ruegeria sp. R11]
gi|214028800|gb|EEB69635.1| hypothetical protein RR11_392 [Ruegeria sp. R11]
Length = 412
Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats.
Identities = 67/426 (15%), Positives = 106/426 (24%), Gaps = 63/426 (14%)
Query: 32 PDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVC- 90
PDV + + Q A+ ++ + + F E S I + G
Sbjct: 44 PDVTQDPVGATGYWSFDATQQARAQAVFDQYEAIAGVRFVEVDGPSMINIYGFDGGSADG 103
Query: 91 TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD 150
+ GT +HE+GHALGL H +
Sbjct: 104 YANIAYSGSGYTGSGALTSGETDLTPGTYGHVVMMHELGHALGLQHSHDG-------SLT 156
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
+ D +VM+Y D Y DI A+Q +YG G I
Sbjct: 157 LEPTWDRPDLTVMTYNHAPD--------YVTELGTFDIQAMQHLYGTSDSFDGWEIVGGG 208
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ G D G ++I + + G T+ +
Sbjct: 209 SSRIIIRGSADGDRMMGTDQSTTLNGRGGHDHIQGRE-ADDILRGSGGRDTLVGGLGDDR 267
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G G DV+IG ++ ND G G D
Sbjct: 268 LIGGQGYDVLIGGLTDDGHSGGPDNDTMYGQRGYDRLE---------------------- 305
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
R L + L+ G D F
Sbjct: 306 ------------------------GGAGRDRLFGGNGRDTLVGGDGADTLNGGFGADTFV 341
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
D G D+ ++ G ++ IT G +A +
Sbjct: 342 FDHADMGETDHITDFGRGADVIDLSGLWLTDISQLTITVGANSTTIQYTDFFELILAGYT 401
Query: 451 DLINAF 456
D +
Sbjct: 402 DPLTGS 407
Score = 38.2 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 21/166 (12%), Positives = 36/166 (21%), Gaps = 7/166 (4%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
TF A +LY + + + +R + + Q + L
Sbjct: 183 TFDIQAMQHLYGTSDSFDGWEIVGGGSSRI-------IIRGSADGDRMMGTDQSTTLNGR 235
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
++ + D+ G D Y L + S
Sbjct: 236 GGHDHIQGREADDILRGSGGRDTLVGGLGDDRLIGGQGYDVLIGGLTDDGHSGGPDNDTM 295
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
Y G L + L+ G D F
Sbjct: 296 YGQRGYDRLEGGAGRDRLFGGNGRDTLVGGDGADTLNGGFGADTFV 341
>gi|288960340|ref|YP_003450680.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Azospirillum sp. B510]
gi|288912648|dbj|BAI74136.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Azospirillum sp. B510]
Length = 1716
Score = 117 bits (292), Expect = 7e-24, Method: Composition-based stats.
Identities = 80/560 (14%), Positives = 138/560 (24%), Gaps = 61/560 (10%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
DV +S +TEL + R L ++ ++ E + F + NG
Sbjct: 947 DVYVVDNVSDVVTELANEGTDEVRTTLNAYTLGANV--ENLTFIGSGAFTGTGNGLANIL 1004
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + D R G G T L + I +
Sbjct: 1005 QGGAGNDTLDGGAGIDTLRGGAGNDTYLVSDIGDVI-------------------VENAG 1045
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D T + SY + + G A + + I GA SL +
Sbjct: 1046 EGTDEVRTGLSSYTLAANIENLTYTGTAAFTGIGNTGNNLIIGGAGNDSLTGDA--GNDT 1103
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI---------------DLNTESWSSIGGYE 257
T+ G+D + G V + L + +
Sbjct: 1104 LDGGAGADTLIGGTGNDTYIVDNAGDVVTELAGQGTDTVRTSLASYTLVANVENLVYTGT 1163
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+T + + S+ G +G D++ G N+ +G D G +G DT+ +
Sbjct: 1164 GPVTFTGNALNNSLTGGAGADLLTGLDGNDTLNGGAGADTLIGGTGNDTYVVD--NVGDV 1221
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + I + L+D E L + ++L + L + G
Sbjct: 1222 LVELPDEGIDTVQSSISHTLLADFENLTLTGSAALTGTGNALNNLLTGNGAANLLTGLEG 1281
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D G D+ G G D A+ ++ E
Sbjct: 1282 DDTLNGGGGADTLIGGTGNDLYVVDNA--GDVVTELVGEGIDTVNASINWTLGANIENLT 1339
Query: 437 PDAFKALE-----------YIASHEDLINAFADAPDLVQVGKDHFS----NFGCEEGRFV 481
A+ + L G D + E
Sbjct: 1340 LTGSAAISATGNELNNVLTGNSGANLLDGGLGADSMAGGAGNDVYIVDNAGDVVTELAGQ 1399
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD---AFKALEYIASHEDLIN 538
D S L + + G L + L
Sbjct: 1400 GTDEVRTSLSSYLLGANIEALTYTGTGDFAGTGNALDNLLTGDLGNDTLSGGDGADTLDG 1459
Query: 539 AFADAPDLVQAGKDHFSNFG 558
+ AG D + G
Sbjct: 1460 GAGSNLLIGGAGNDVYLVGG 1479
Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats.
Identities = 81/564 (14%), Positives = 151/564 (26%), Gaps = 42/564 (7%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TEL + R +L ++ V ++ E + N +
Sbjct: 1120 DTYIVDNAGDVVTELAGQGTDTVRTSLASYTLVANV--ENLVYTGTGPVTFTGNALNNSL 1177
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + D D G G T++ + V D
Sbjct: 1178 TGGAGADLLTGLDGNDTLNGGAGADTLIGGTGND----------TYVVDNVGDVLVELPD 1227
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ +S+ + + + T + + + GA G + +
Sbjct: 1228 EGIDTVQSSISHTLLADFENLTLTGSAALTGTGNALNNLLTGNGAANLLTG---LEGDDT 1284
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWS-SIGGYEKNMTIAQHT 266
T+ G+DL + G V ID S + ++G +N+T+
Sbjct: 1285 LNGGGGADTLIGGTGNDLYVVDNAGDVVTELVGEGIDTVNASINWTLGANIENLTLTGSA 1344
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
I S G+ N+V+ GNS N+ G D G +G D + + +
Sbjct: 1345 AI-SATGNELNNVLTGNSGANLLDGGLGADSMAGGAGNDVYIVDNAGDVVTELAGQGTDE 1403
Query: 327 VYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
V + +++E L + ++L + L G D +
Sbjct: 1404 VRT-SLSSYLLGANIEALTYTGTGDFAGTGNALDNLLTGDLGNDTLSGGDGADTLDGGAG 1462
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG----------VKEGR 435
G D+ L + R A + +T G G
Sbjct: 1463 SNLLIGGAGNDVYLVGGLGDQVVELAGEGIDEVRTALTGYTLTDGVETLTYTGVAAFAGT 1522
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS----NFGCEEGRFVTFDSYLYLGS 491
+ A + L + +G D + EG D S
Sbjct: 1523 GNALDNLIAGGAGADTLDGGLGADTLIGGLGDDVYVVDSVGDTVIEGADAGIDEVRTTLS 1582
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF---KALEYIASHEDLINAFADAPDLVQ 548
L + + G L+ A ++ L+
Sbjct: 1583 AFTLGDNVERLLFQGGGDAVGIGNGLDNWLTGNAGNDTLDGAAGNDTLLGGLGTDMLTGG 1642
Query: 549 AGKDHFSNFGYEEGRSI-TFNPDL 571
+G D F + +I F+
Sbjct: 1643 SGADLFVFASGDGQDTITDFDAAQ 1666
Score = 111 bits (276), Expect = 5e-22, Method: Composition-based stats.
Identities = 71/512 (13%), Positives = 133/512 (25%), Gaps = 44/512 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S + + N G S D G G T+ + + +G
Sbjct: 887 GGSGFEVVYGNVGNDRLWTSLSGPLTAFGGAGNDTLIGGTGNDTLDGGSGTDSLVGGIGD 946
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
N V + N+ D T++ +Y + + G A + +A
Sbjct: 947 DVYVVDNVSDVVTELANE-GTDEVRTTLNAYTLGANVENLTFIGSGAFTGTGNGLANILQ 1005
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTE 248
GA I T+ G+D D+ + + ++ T
Sbjct: 1006 GGA-----------GNDTLDGGAGIDTLRGGAGNDTYLVSDIGDVIVENAGEGTDEVRTG 1054
Query: 249 SWSSI---------GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
S T +T ++G +GND + G++ N+ +G D
Sbjct: 1055 LSSYTLAANIENLTYTGTAAFTGIGNTGNNLIIGGAGNDSLTGDAGNDTLDGGAGADTLI 1114
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQ 358
G +G DT+ + + V + +++VE L + +
Sbjct: 1115 GGTGNDTYIVDNAGDVVTELAGQGTDTVRT-SLASYTLVANVENLVYTGTGPVTFTGNAL 1173
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ L A + L + G D G D + + +
Sbjct: 1174 NNSLTGGAGADLLTGLDGNDTLNGGAGADTLIGGTGNDTYVVDNVGDVLVELPDEGIDTV 1233
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ + + + A A + L A G D + G +
Sbjct: 1234 QSSISHTLLADFENLTLTGSAALTGTGNALNNLLTGNGAANLLTGLEGDDTLNGGGGADT 1293
Query: 479 RFVTFDSYLYLGSY-DDLRNVF---GSDRGAAARHYITHGVKEGRNPDA----------- 523
+ LY+ D+ G D A+ ++ E
Sbjct: 1294 LIGGTGNDLYVVDNAGDVVTELVGEGIDTVNASINWTLGANIENLTLTGSAAISATGNEL 1353
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
L + L AG D +
Sbjct: 1354 NNVLTGNSGANLLDGGLGADSMAGGAGNDVYI 1385
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 60/406 (14%), Positives = 108/406 (26%), Gaps = 41/406 (10%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TEL + ++ W+ ++ E ++ ++ N
Sbjct: 1301 DLYVVDNAGDVVTELVGEGIDTVNASIN-WTLGANI--ENLTLTGSAAISATGNELNNVL 1357
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+S + AD G G + + V
Sbjct: 1358 TGNSGANLLDGGLGADSMAGGAGNDVYIV-------------------DNAGDVVTELAG 1398
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D TS+ SY + + G + A+ + G+ +
Sbjct: 1399 QGTDEVRTSLSSYLLGANIEALTYTGTGDFAGTGN--ALDNLLTGDLGNDTLSGGDGADT 1456
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ G+D+ + G ++L E + T+ +
Sbjct: 1457 LDGGAGSNLLIGGAGNDVY--LVGGLGDQVVELAGEGIDEVRTALTGYTLTDGVETLTYT 1514
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G + GN+ +N+ +G D DG G DT +Y + V + +
Sbjct: 1515 GVAAFAG-TGNALDNLIAGGAGADTLDGGLGADTLIGGLGDDVYVVDSV--GDTVIEGAD 1571
Query: 333 HKQDFLS----------DVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFE 381
D + +VERL F + L A + L G D
Sbjct: 1572 AGIDEVRTTLSAFTLGDNVERLLFQGGGDAVGIGNGLDNWLTGNAGNDTLDGAAGNDTLL 1631
Query: 382 SMKHFYEFGLSEGRDI-TFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
G D+ F S + D G G AA
Sbjct: 1632 GGLGTDMLTGGSGADLFVFASGDGQDTITDFDAAQGDRIGLAAGQS 1677
Score = 77.1 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 55/392 (14%), Positives = 99/392 (25%), Gaps = 45/392 (11%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKD-SPFIQTIYDSGGDDLLDLTLIGGVK---NYIDLNTE 248
+ Y A +G + + + D G + G + + +
Sbjct: 748 QRYDANAVRVGGEFLLTDTTAGNQYQQAMAVRDDGSIVTAWASPDGSSQGIQSRVLKTAF 807
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL---- 304
+ ++ G N T+ + G G+D++ GN +++ +GND G +G
Sbjct: 808 PYDTLYGSLGNDTLVAGISRTRIFGLDGDDLLQGNGSSDYLDGGNGNDTIVGGAGDVFIG 867
Query: 305 ----DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
DT + +P+ L +VY D L ++
Sbjct: 868 GAGVDTLIFDSPTALTLDVGGSGFEVVY--GNVGNDRLW--------------TSLSGPL 911
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL----------YLGSYDD 410
A + LI G D + G D+ +
Sbjct: 912 TAFGGAGNDTLIGGTGNDTLDGGSGTDSLVGGIGDDVYVVDNVSDVVTELANEGTDEVRT 971
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
N + +I G G L+ A ++ L G D +
Sbjct: 972 TLNAYTLGANVENLTFIGSGAFTGTGNGLANILQGGAGNDTLDGGAGIDTLRGGAGNDTY 1031
Query: 471 SNF----GCEEGRFVTFDSYLYLGSYDDLRNVFGSDR---GAAARHYITHGVKEGRNPDA 523
E D S L + AA G
Sbjct: 1032 LVSDIGDVIVENAGEGTDEVRTGLSSYTLAANIENLTYTGTAAFTGIGNTGNNLIIGGAG 1091
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+L A ++ L + G D +
Sbjct: 1092 NDSLTGDAGNDTLDGGAGADTLIGGTGNDTYI 1123
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/377 (12%), Positives = 90/377 (23%), Gaps = 42/377 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI----- 262
G D L +D+ + + G N +
Sbjct: 851 GNGNDTIVGGAGDVFIGGAGVDTLIFDSPTA--LTLDVGGSGFEVVYGNVGNDRLWTSLS 908
Query: 263 -----AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
++++G +GND + G S + G+D Y +
Sbjct: 909 GPLTAFGGAGNDTLIGGTGNDTLDGGSGTDSLVGGIGDD-----------VYVVDNVSDV 957
Query: 318 IYRFENAIIVYDANE-HKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ N + ++VE L F +IL+ A + L
Sbjct: 958 VTELANEGTDEVRTTLNAYTLGANVENLTFIGSGAFTGTGNGLANILQGGAGNDTLDGGA 1017
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYL--------YLGSYDDLRNVF--GSDRGAAARH 425
G D + +S+ D+ ++ L SY N+ AA
Sbjct: 1018 GIDTLRGGAGNDTYLVSDIGDVIVENAGEGTDEVRTGLSSYTLAANIENLTYTGTAAFTG 1077
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS----NFGCEEGRFV 481
G +L A ++ L + G D + E
Sbjct: 1078 IGNTGNNLIIGGAGNDSLTGDAGNDTLDGGAGADTLIGGTGNDTYIVDNAGDVVTELAGQ 1137
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD---AFKALEYIASHEDLIN 538
D+ + L + G + L + ++ L
Sbjct: 1138 GTDTVRTSLASYTLVANVENLVYTGTGPVTFTGNALNNSLTGGAGADLLTGLDGNDTLNG 1197
Query: 539 AFADAPDLVQAGKDHFS 555
+ G D +
Sbjct: 1198 GAGADTLIGGTGNDTYV 1214
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/314 (15%), Positives = 92/314 (29%), Gaps = 18/314 (5%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
DV +TEL + R +L + ++ E + F + N
Sbjct: 1382 DVYIVDNAGDVVTELAGQGTDEVRTSLSSYLLGANI--EALTYTGTGDFAGTGNALDNLL 1439
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D D AD G G ++ G V + +
Sbjct: 1440 TGDLGNDTLSGGDGADTLDGGAGSNLLIGGAGNDVYL---------VGGLGDQVVELAGE 1490
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D T++ Y + G A + + GA +L + +
Sbjct: 1491 -GIDEVRTALTGYTLTDGVETLTYTGVAAFAGTGNALDNLIAGGAGADTL-DGGLGADTL 1548
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-----IGGYEKNMTIAQHTV 267
+ DS GD +++ G + L+ + + + + +
Sbjct: 1549 IGGLGDDVYVVDSVGDTVIEGADAGIDEVRTTLSAFTLGDNVERLLFQGGGDAVGIGNGL 1608
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ G++GND + G + N+ G D+ G SG D F + + I F+ A
Sbjct: 1609 DNWLTGNAGNDTLDGAAGNDTLLGGLGTDMLTGGSGADLFVFASGDGQDTITDFDAAQGD 1668
Query: 328 YDANEHKQDFLSDV 341
Q + D
Sbjct: 1669 RIGLAAGQSYSVDT 1682
>gi|163738105|ref|ZP_02145521.1| Peptidase, metallopeptidase [Phaeobacter gallaeciensis BS107]
gi|161388721|gb|EDQ13074.1| Peptidase, metallopeptidase [Phaeobacter gallaeciensis BS107]
Length = 413
Score = 116 bits (289), Expect = 2e-23, Method: Composition-based stats.
Identities = 67/355 (18%), Positives = 103/355 (29%), Gaps = 36/355 (10%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
I + ++ P V + + + + + +++ R L + + + F
Sbjct: 26 EIGTQAIITYSFTETGSLADPAVSDPYGAT-EYWSFDEDQRDIFREGLSLYEDISGVRFI 84
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGI-GKGTILSHNALHEIGH 130
E I + S + KGT LHEIGH
Sbjct: 85 EVEGRGMINAFGTTGSSAGGWANISMSGNGFTGRGDLTVDTDVMTKGTYGYVTVLHEIGH 144
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
LGL H G+ D D+ +VM+Y Y DI A
Sbjct: 145 TLGLQHSHDG-------GLTLDRHADTPENTVMTYNHSP--------AYVTELGTFDIQA 189
Query: 191 VQKIYGAPKGSLGNNIYKIEV------------QQKDSPFIQTIYDSGGDDLL-----DL 233
+Q +YG G I + TI GG D + D
Sbjct: 190 MQHLYGNSDSFTGWEILGGGSDPIIIRSTDASETVIGTDQNTTINAKGGHDHVQGREADD 249
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
TL G + + G + T ++ G S +DV+ GN +++ S
Sbjct: 250 TLRGADGRDTMVGGLGEDRLFGGNGADLLIGGTGGDAYSGGSDDDVLYGNRGHDMLHGGS 309
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
GND G G DT + A D + R AD
Sbjct: 310 GNDHLLGGIGRDTL--AGGDGSDTLTGGTGADTFVFDQADAFDTNRITDFGRGAD 362
>gi|254502450|ref|ZP_05114601.1| hypothetical protein SADFL11_2489 [Labrenzia alexandrii DFL-11]
gi|222438521|gb|EEE45200.1| hypothetical protein SADFL11_2489 [Labrenzia alexandrii DFL-11]
Length = 432
Score = 116 bits (289), Expect = 2e-23, Method: Composition-based stats.
Identities = 63/330 (19%), Positives = 115/330 (34%), Gaps = 26/330 (7%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF 81
++ F K + + T + R AL E++K +++ F E + D
Sbjct: 103 TFTYRFETSKAADFPWTNVG-NTTGFTEAEKSAIRSALQEYNKHININFVEDNSSQDAVL 161
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG-------KGTILSHNALHEIGHALGL 134
+ T + D W LHEIGH LGL
Sbjct: 162 SFYKADDLYTDLSVTGGGRGRGSYSGDDWDGAAVFNANRDLSSQSEFDLVLHEIGHTLGL 221
Query: 135 MHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
HPG Y+ G G + D+ +VMSY + ++ DI+A+Q+
Sbjct: 222 KHPGDYDRGGNNPAGPFLPADEDNERWTVMSYNPDPSTDIE-----PDRLKFYDIMALQQ 276
Query: 194 IYGAPKGS--LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+G G+ N+ + + ++ F D L L N D N + S
Sbjct: 277 FWGTNNGNQDSAQNVMRFYNTKTETHFYTANADERDQVLAYLEDYIFEGNMFDTNATAES 336
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I Y + + T + + + V+ + + FE ++ + +T
Sbjct: 337 GIAVYR-FLNQSTGTHFYTAAEAERDSVL--ENLPSYLFEGVAYHAYETADAGET----- 388
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
L++ Y +N Y A+E ++D++ +
Sbjct: 389 --ALFRFYNTQNGTHFYTASEAERDYVINT 416
>gi|182676844|ref|YP_001830991.1| proprotein convertase P [Beijerinckia indica subsp. indica ATCC 9039]
gi|182636474|gb|ACB97247.1| Proprotein convertase P [Beijerinckia indica subsp. indica ATCC 9039]
Length = 2911
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 65/503 (12%), Positives = 130/503 (25%), Gaps = 39/503 (7%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
FE + + ++ + G + D G G + +
Sbjct: 2346 FENLTGSAYSDVLTGDGGD-NVIDGGAGNDTLYGGAGNDTLIGGAGNDKLQGGAGDDTL- 2403
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
G Y S S + + + + D++
Sbjct: 2404 -------DGGAGTDAASYTQALAGVTVSLAVSGPQNTIGAGTDTLLNIENLTGSIYDDVL 2456
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
G+ GN++ T+ G D + T +
Sbjct: 2457 TGDAGNNVIDGNAGNDL------IDGGLGNDTLIGGSGTDTVSYASATSGVTVSLALTTA 2510
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G + + E++ GS+ NDV+ G+S NNV GND DG +G+DT Y
Sbjct: 2511 QNTGGAGTDTL-----SGFENLTGSAYNDVLTGDSGNNVIDGGLGNDTLDGGAGVDTVTY 2565
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + + D LS E L + ++++ A +
Sbjct: 2566 VSATSGVTVSLA--LTTAQATGGAGTDTLSGFENLTGSAYSDVLTGDGGDNVIDGGAGND 2623
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G D + G D + A +
Sbjct: 2624 TLYGGAGNDTLIGGAGNDKLQGGAGDDTL--DGGAGTDAASYTQALAGVTVSLAVSGPQN 2681
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE---GRFVTFDSY 486
+ G + + ++D++ A + + + G D+
Sbjct: 2682 TIGAGTDTLLNIENLTGSIYDDVLTGDAGNNVIDGNAGNDLIDGGLGNDTLIGGTGIDTV 2741
Query: 487 LYLGSYDDL---------RNVFGSDRGAAARHYITHGVKEGRNPDA---FKALEYIASHE 534
Y + + +N G+ + G + A ++
Sbjct: 2742 TYTSATSGVTVSLALTTAQNTGGAGTDTLSGFENLTGSAYNDVLTGDAGNNVINGGAGND 2801
Query: 535 DLINAFADAPDLVQAGKDHFSNF 557
L+ + AG D +
Sbjct: 2802 ILVGSAGSDTLDGGAGNDVYIYH 2824
Score = 111 bits (277), Expect = 5e-22, Method: Composition-based stats.
Identities = 70/488 (14%), Positives = 133/488 (27%), Gaps = 28/488 (5%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
FE + + ++ ++G + + D G G T+ +A +
Sbjct: 2186 FENLTGSAYNDVLTGDSGD-NVIDGGAGNDLIDGGLGNDTLIGGAGIDTLTYASATSGVT 2244
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
+L L + G + S V++ + + + + +
Sbjct: 2245 VSLALTTAQATGGAGTDTLSGFENLTGSAYNDVLTGSGGDNVIDGGAGNDLIDGGLGNDT 2304
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ GA ++ V + G D L Y D
Sbjct: 2305 LI---GGAGVDTVTYVSATSGVTVSLALTTAQATGGAGTDTLSGFENLTGSAYSD----- 2356
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G + I +++ G +GND +IG + N+ +G+D DG +G D Y
Sbjct: 2357 --VLTGDGGDNVIDGGAGNDTLYGGAGNDTLIGGAGNDKLQGGAGDDTLDGGAGTDAASY 2414
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + D L ++E L +L A
Sbjct: 2415 TQALAGVTVSLAVSGPQNTIG--AGTDTLLNIENLT---------GSIYDDVLTGDAGNN 2463
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D+ + G D + G L + G A
Sbjct: 2464 VIDGNAGNDLIDGGLGNDTLIGGSGTDTVSYASATSGVTVSLALTTAQNTGGAGTD-TLS 2522
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD---SY 486
G + L + + + + G D + G V+ +
Sbjct: 2523 GFENLTGSAYNDVLTGDSGNNVIDGGLGNDTLDGGAGVDTVTYVSATSGVTVSLALTTAQ 2582
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYI--THGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
G+ D + F + G+A + G L A ++ LI +
Sbjct: 2583 ATGGAGTDTLSGFENLTGSAYSDVLTGDGGDNVIDGGAGNDTLYGGAGNDTLIGGAGNDK 2642
Query: 545 DLVQAGKD 552
AG D
Sbjct: 2643 LQGGAGDD 2650
Score = 98.7 bits (244), Expect = 3e-18, Method: Composition-based stats.
Identities = 54/353 (15%), Positives = 98/353 (27%), Gaps = 20/353 (5%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
D + G D + + ++L + + + + E++
Sbjct: 2056 IGDEAGSNILVGGAGVDTVSYSSASAGV-TVNLGVTTAQATRSTGTDTLLGF----ENLT 2110
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-- 330
GS+ NDV+ GN NNV +GND DG G DT A + + V A
Sbjct: 2111 GSAYNDVLTGNGGNNVIDGGAGNDTIDGGPGNDTLIGGAGIDTVSYASATSGVTVSLALT 2170
Query: 331 -----NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D LS E L + ++++ A + + +G D
Sbjct: 2171 TAQATGGAGTDTLSGFENLTGSAYNDVLTGDSGDNVIDGGAGNDLIDGGLGNDTLIGGAG 2230
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
+ S + G+D + + + +
Sbjct: 2231 IDTLTYASATSGVTVSLALTTAQAT--GGAGTDTLSGFENLTGSAYNDVLTGSGGDNVID 2288
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV----TFDSYLYLGSYDDLRNVFGS 501
+ DLI+ L+ + + G+ D + F +
Sbjct: 2289 GGAGNDLIDGGLGNDTLIGGAGVDTVTYVSATSGVTVSLALTTAQATGGAGTDTLSGFEN 2348
Query: 502 DRGAAARHYI--THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G+A + G L A ++ LI + AG D
Sbjct: 2349 LTGSAYSDVLTGDGGDNVIDGGAGNDTLYGGAGNDTLIGGAGNDKLQGGAGDD 2401
Score = 94.5 bits (233), Expect = 5e-17, Method: Composition-based stats.
Identities = 51/402 (12%), Positives = 112/402 (27%), Gaps = 23/402 (5%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ + ++ + D G G T+ +A + +L L + G
Sbjct: 2457 TGDAGNNVIDGNAGNDLIDGGLGNDTLIGGSGTDTVSYASATSGVTVSLALTTAQNTGGA 2516
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ S V++ + + + G +
Sbjct: 2517 GTDTLSGFENLTGSAYNDVLTGDSGNNVIDGGLGN----------DTLDGGAGVDTVTYV 2566
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + V + T G D L Y D + G + I
Sbjct: 2567 SATSGVTVSLALTTAQAT--GGAGTDTLSGFENLTGSAYSD-------VLTGDGGDNVID 2617
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++ G +GND +IG + N+ +G+D DG +G D Y + +
Sbjct: 2618 GGAGNDTLYGGAGNDTLIGGAGNDKLQGGAGDDTLDGGAGTDAASYTQALAGVTVSLAVS 2677
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
D L ++E L + ++++ A + + +G D
Sbjct: 2678 GPQNTIG--AGTDTLLNIENLTGSIYDDVLTGDAGNNVIDGNAGNDLIDGGLGNDTLIGG 2735
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ S + + G+D + + + DA +
Sbjct: 2736 TGIDTVTYTSATSGVTVSLALTTAQNT--GGAGTDTLSGFENLTGSAYNDVLTGDAGNNV 2793
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ D++ A + L + + +G + D+
Sbjct: 2794 INGGAGNDILVGSAGSDTLDGGAGNDVYIYHQADGNMLIHDA 2835
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/329 (12%), Positives = 87/329 (26%), Gaps = 55/329 (16%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
FE + + ++ + G + D G G + +
Sbjct: 2595 FENLTGSAYSDVLTGDGGD-NVIDGGAGNDTLYGGAGNDTLIGGAGNDKLQGGAGDDTL- 2652
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
G Y S S + + + + D++
Sbjct: 2653 -------DGGAGTDAASYTQALAGVTVSLAVSGPQNTIGAGTDTLLNIENLTGSIYDDVL 2705
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
G+ GN++ T+ G D + T T +
Sbjct: 2706 TGDAGNNVIDGNAGNDL------IDGGLGNDTLIGGTGIDTVTYTSATSGVTVSLALTTA 2759
Query: 250 WSSIGGYEKNMT----IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++ G ++ + + + G +GN+V+ G + N++ S+G+D DG +G D
Sbjct: 2760 QNTGGAGTDTLSGFENLTGSAYNDVLTGDAGNNVINGGAGNDILVGSAGSDTLDGGAGND 2819
Query: 306 TFFYYAPSYLYKIYRFEN------------------------------------AIIVYD 329
+ Y+ I+ + +
Sbjct: 2820 VYIYHQADGNMLIHDAGDSSGPTPFNTLSFADLTLSNLLFSQSGTDLVIGIAGTGHSITV 2879
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
NE L ++++ FAD +
Sbjct: 2880 QNELGASGLDGIQQINFADGSNMTHAQIL 2908
Score = 44.0 bits (102), Expect = 0.081, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 66/241 (27%), Gaps = 5/241 (2%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
S V + T S S + + + I ++ +
Sbjct: 829 SAVTNRTTYTKSDGSSGAVAAVDFATNTVGDIATSANGGITIQSVPEGGATPSNSFVIKN 888
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
+ H + L G V + ++ + G A
Sbjct: 889 TSAHA--YTLSNGQLIDNTTGQTVIASGTKGVFSTNQNDSIAVASSDPTPYWLGGGTGAA 946
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+ + + G + I P D +L ++ G +
Sbjct: 947 TLTGGAGNTVFLINSKTIVHGGTGFNIAEVTDAKPIT---VDLKTANLQEVIGGAGDGVF 1003
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
T I G N I T +++ G +G+D++ + +V +GNDV G S
Sbjct: 1004 NASGTNWNVFIQGGSGNNIIIGGTANDALAGGTGDDLIEAGTGGSVIHAGAGNDVIYGGS 1063
Query: 303 G 303
G
Sbjct: 1064 G 1064
>gi|302337198|ref|YP_003802404.1| Rhamnan synthesis F [Spirochaeta smaragdinae DSM 11293]
gi|301634383|gb|ADK79810.1| Rhamnan synthesis F [Spirochaeta smaragdinae DSM 11293]
Length = 1808
Score = 115 bits (288), Expect = 3e-23, Method: Composition-based stats.
Identities = 67/342 (19%), Positives = 112/342 (32%), Gaps = 81/342 (23%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYD 409
D + Y +DL + + +HF G +GR+ FD+ Y +Y
Sbjct: 690 DLLASGLFDENYYIEDNKDLYFTVANPI----RHFLMTGFKKGRNPHPLFDTKYYYETYP 745
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKD 468
D++ HYI +G KEGRNP F YI ++ D+ + +
Sbjct: 746 DIKRA----GLNPVLHYIRYGAKEGRNPHPLFDTKFYIGNYPDVKSNGVNPLM------- 794
Query: 469 HFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
H+ N G +E R FD+ YL +Y D+R HYI +G+KE RN +
Sbjct: 795 HYLNLGWKERRNPNPNFDTDYYLTTYSDIRIK----NVNPLSHYILYGIKENRNTHLIGS 850
Query: 527 LEYIASH--------------EDLINAFA------------------------------- 541
+ I S+ D +
Sbjct: 851 KDSITSNKVISRNKDKELLNKNDFLYGDGLKQIYLKIENYKKENMSIEKIAIQTGLFNEK 910
Query: 542 -----DAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
++ H+ GY G + + FN YL + D++ H+
Sbjct: 911 YYINNAKGINIKEPFKHYLERGYLLGLNPSSIFNTSQYLDANRDVYWA----NMNPLFHF 966
Query: 595 ITHGMKEGR-ALGISGMQFKSVMNLSEKSRDKADLSLSFDHK 635
I +G E R + + + + + L +D +
Sbjct: 967 IKYGYSENRKMVHPGDINSEFHRSFGKSEYGVTGPVLYYDRE 1008
Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 31/218 (14%)
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYL 489
K+ F YI ++DL A+ HF G ++GR FD+ Y
Sbjct: 689 KDLLASGLFDENYYIEDNKDLYFTVANP-------IRHFLMTGFKKGRNPHPLFDTKYYY 741
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQ 548
+Y D++ + HYI +G KEGRNP F YI ++ D+ + P +
Sbjct: 742 ETYPDIKRAGLN----PVLHYIRYGAKEGRNPHPLFDTKFYIGNYPDVKSN-GVNPLM-- 794
Query: 549 AGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
H+ N G++E R+ F+ D YLT+Y D+ HYI +G+KE R
Sbjct: 795 ----HYLNLGWKERRNPNPNFDTDYYLTTYSDIR----IKNVNPLSHYILYGIKENRNTH 846
Query: 607 ISGMQFKSVMNLSEKSRDKAD----LSLSFDHKKVDLY 640
+ G + N + + +Y
Sbjct: 847 LIGSKDSITSNKVISRNKDKELLNKNDFLYGDGLKQIY 884
>gi|308801467|ref|XP_003078047.1| unnamed protein product [Ostreococcus tauri]
gi|116056498|emb|CAL52787.1| unnamed protein product [Ostreococcus tauri]
Length = 881
Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats.
Identities = 62/251 (24%), Positives = 89/251 (35%), Gaps = 52/251 (20%)
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR----NPDAFKALEYIASHEDLINA 455
+ YL Y D+ FG+D AA +H+ G EGR + Y+A +EDL
Sbjct: 323 TAKCYLNRYADIFKKFGTDLEAAKKHFHDVGQHEGRIAHCSISDADLKCYLARYEDL--- 379
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFV--------------------TFDSYLYLGSYDDL 495
G+ HF G EGR V +D+ Y+ +YDD+
Sbjct: 380 ---PWSQPNDGRTHFFKKGWMEGRTVKCAGDVDRYKYNFDDAELMYDYDAVCYIDNYDDV 436
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNP--------DAFKALEYIASHEDLINAFADAPDLV 547
R FG D A HY G E R P D A+ + ++ D+ F V
Sbjct: 437 RKAFGFDLTKAKTHYFIKGASEKRKPICTREPVIDNLDAMCFASNFWDIHRYFGQYAGRV 496
Query: 548 QAGKD-----------HFSNFGYEEGRSITFNPD---LYLTSYDDLWNVFGSDRSAAAQH 593
D H + + P YL Y ++ +D AA H
Sbjct: 497 SQSTDIANIKTFMRVHHKQEARKKLSKCERVAPADFRCYLERYPEVPRSHANDIEAARTH 556
Query: 594 YITHGMKEGRA 604
++ G KEG+
Sbjct: 557 WLHSGWKEGKN 567
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 67/330 (20%), Positives = 108/330 (32%), Gaps = 79/330 (23%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----------- 397
I ++ + Y A YEDL D HF++ G EGR +
Sbjct: 357 GRIAHCSISDADLKCYLARYEDLPWSQPND---GRTHFFKKGWMEGRTVKCAGDVDRYKY 413
Query: 398 ---------TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP----------- 437
+D+ Y+ +YDD+R FG D A HY G E R P
Sbjct: 414 NFDDAELMYDYDAVCYIDNYDDVRKAFGFDLTKAKTHYFIKGASEKRKPICTREPVIDNL 473
Query: 438 -------DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE----GRFVTFDSY 486
+ + Y + ++ D ++ + H ++ R D
Sbjct: 474 DAMCFASNFWDIHRYFGQYAGRVSQSTDIANIKTFMRVHHKQEARKKLSKCERVAPADFR 533
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP---------------------DAFK 525
YL Y ++ +D AA H++ G KEG+NP
Sbjct: 534 CYLERYPEVPRSHANDIEAARTHWLHSGWKEGKNPKCDSRPHFYRHAMKDKHWPHIRDDD 593
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD---------LYLTSY 576
A Y+ + D+ + ++ DH GR +P Y+ Y
Sbjct: 594 AQCYLDRYPDIAKKY--NHLTGKSKLDHAKIHYLRLGRRFRRDPTCAGPHEATKCYIARY 651
Query: 577 DDLWNVFG--SDRSAAAQHYITHGMKEGRA 604
DD+ + + AA+H T G++E R
Sbjct: 652 DDVRKAYMQHKSLAKAAEHMRTIGVQEERE 681
Score = 80.6 bits (197), Expect = 7e-13, Method: Composition-based stats.
Identities = 58/321 (18%), Positives = 109/321 (33%), Gaps = 69/321 (21%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----- 397
+ F D + + Y +Y+D+ + G D+ ++ H++ G SE R
Sbjct: 412 KYNFDDAELMYD----YDAVCYIDNYDDVRKAFGFDLTKAKTHYFIKGASEKRKPICTRE 467
Query: 398 ----TFDSYLYLGSYDDLRNVFG---------SDRGAAARHYITHGVKEGR-------NP 437
D+ + ++ D+ FG +D H +E R
Sbjct: 468 PVIDNLDAMCFASNFWDIHRYFGQYAGRVSQSTDIANIKTFMRVHHKQEARKKLSKCERV 527
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV---------------- 481
Y+ + ++ + A+ ++ + H+ + G +EG+
Sbjct: 528 APADFRCYLERYPEVPRSHAND---IEAARTHWLHSGWKEGKNPKCDSRPHFYRHAMKDK 584
Query: 482 ------TFDSYLYLGSYDDLRN-----VFGSDRGAAARHYITHGVKEGRNPDAF----KA 526
D+ YL Y D+ S A HY+ G + R+P
Sbjct: 585 HWPHIRDDDAQCYLDRYPDIAKKYNHLTGKSKLDHAKIHYLRLGRRFRRDPTCAGPHEAT 644
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI-----TFNPDLYLTSYDDLWN 581
YIA ++D+ A+ L +A +H G +E R + Y+ Y L
Sbjct: 645 KCYIARYDDVRKAYMQHKSLAKAA-EHMRTIGVQEERETRCALSNDDLRCYMARYPHLKT 703
Query: 582 VFGSDRSAAAQHYITHGMKEG 602
F D + A +H+ + G +G
Sbjct: 704 KFDGDTALAREHFFSEGFMQG 724
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 56/359 (15%), Positives = 89/359 (24%), Gaps = 74/359 (20%)
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G +G F + + F + V D + + +A C+ S +
Sbjct: 127 GKAGNLPAFTFGIDVGADVTGFGSVKGVSTEVGVGLDL--NGRQFCYAAGCVKSSGIAV- 183
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
L G + + + GR L FG D
Sbjct: 184 ----------SLPGAAGSAAI-VLTGYKDIASVPGRAEF------------LTLGFGIDI 220
Query: 420 GAAARHYITHGVKEGRNPDAFK-ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ P F AL Y+ + N + N
Sbjct: 221 PSPLP------------PLDFDIALTYVYVDPSMANFAGVSISYTVGSDGGAPNLPITLE 268
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE---GRNPDAFK-----ALEYI 530
F + + Y H + P F A Y+
Sbjct: 269 ISQGFCEAICIEKYGGDCGSSEGAFLGTHLHPSNSSWEPFALLGKPTPFYMDDDTAKCYL 328
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI-----TFNPDLYLTSYDDLWNVFGS 585
+ D+ F +A K HF + G EGR + YL Y+DL +
Sbjct: 329 NRYADIFKKFGTDL---EAAKKHFHDVGQHEGRIAHCSISDADLKCYLARYEDLPWSQPN 385
Query: 586 DRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYF 644
D H+ G EGR + +G ++ +L DY
Sbjct: 386 DGR---THFFKKGWMEGRTVKCAGDV----------------DRYKYNFDDAELMYDYD 425
>gi|329850545|ref|ZP_08265390.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328840860|gb|EGF90431.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1439
Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats.
Identities = 91/558 (16%), Positives = 163/558 (29%), Gaps = 106/558 (18%)
Query: 3 NIKPVYTTERIADHLLRDQYWSNYFIRYKPD--------VLTTHRLSFDITELNPNAQEV 54
+ + ++ ++ D +L W + + + + N Q
Sbjct: 14 DGRYEFSHDQDIDAVLIGSRWDITNLTFSFPVSGSVYQPGYDSPGFVTNHIAFNAMQQTA 73
Query: 55 ARWALGEWSKVVDLTFEETSIHSDIK--FISSNNGYVCTPRYDS--------RYFMEINF 104
R LG+ + L+F E + S+ S P + + +
Sbjct: 74 VRLLLGQVAGFTLLSFTEITETSNTHAVLRFSQTSDSGVPTAEGRFPGPDVGDGDVWVGT 133
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN---------------GGYPVYGV 149
+ G LHE GH +GL H S G
Sbjct: 134 STDQLAYTVPQSGNWGMDMLLHETGHTMGLKHGHSDYTDFDLTIDGHVSTFMPGPRYGTQ 193
Query: 150 DNDYENDSFLTSVMSYFMPQD----SMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGN 204
++DS SVM+Y + + + T M +DI A+Q +YGA + +
Sbjct: 194 ALPTDHDSSAYSVMTYRSDPGNVMMTPQSSLYDMAQTYMQNDIAALQYLYGANFNVNATD 253
Query: 205 NIYKIEVQQKD------------------SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++Y + + +TI+D GG+D +L+ + +DLN
Sbjct: 254 SVYTFDTSTGEMFINGVGQGIPTRPDGDVGKIFRTIWDGGGNDTYNLSNSFRNQ-TVDLN 312
Query: 247 TESWS--------SIGGYEKNMTIA--------------QHTVIESVVGSSGNDVVIGNS 284
W+ + G + ++T+ ++IE+V +G+D + GN+
Sbjct: 313 PGGWTIFNDRQLADLRGGDPDVTVNAPGNFANARLYNFDTRSLIENVTTGAGHDTIYGNT 372
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
A N G+D+ G G DT + + RL
Sbjct: 373 ARNHIQAGGGDDLVYGGDGWDTL--EGGFSNDTLEGGDGYD-----------------RL 413
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK-HFYEFGLSEGRDITFDSYL 403
D + + + L G DV G D + S
Sbjct: 414 NGGDGQDSLIGGTGDDTILGGDGTDTLDGGGGDDVLRGETGGGGSARGGTGNDTYYMSGG 473
Query: 404 YL----GSYDDLRNVFGS---DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
Y+ G D+ + D + I G G + + A + L
Sbjct: 474 YIFELPGEGLDVLFAEDNADLDDNVETLYLIGDGNYRGIGNASHNLIVGNAGNNRLDGGE 533
Query: 457 ADAPDLVQVGKDHFSNFG 474
+ G D G
Sbjct: 534 GNDTLQGGSGNDELIAGG 551
Score = 53.6 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 71/540 (13%), Positives = 144/540 (26%), Gaps = 45/540 (8%)
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLM---HPGSYNGGYPVYGVDNDYENDSF 158
I + + + + + + LG S + + G D S
Sbjct: 854 IGAAANETYFGTVDGNRLDGGIGVDVLRGGLGDDTYVVDNSNDKVFEAAGEGTDALYTSV 913
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
+ ++ M ++DI+ +
Sbjct: 914 SYMLTGRYIETVFMTGGDAIAVTGNSLNDIIV------GNSAANTLTGLAGADLLDGGAG 967
Query: 219 IQTIYDSGGDDLLDLTLIG-----GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ G+D + G ID+ S G T + +G
Sbjct: 968 GDLLIGGSGNDTFSVDSAGDVVVENASEGIDIVEAFASVTLGDNVENLRFWGTANLNGIG 1027
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY---------RFENA 324
++ +V+ GNS NN +G+D + + D + +Y R+ +
Sbjct: 1028 NALGNVMTGNSGNNRLDGGAGDDTYYVQNVGDNVVEANGNGTDTVYASVSYSLSGRYVES 1087
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF---E 381
+I+ S+ L L A + LI G D F +
Sbjct: 1088 LILTGVQAIDATGNSNANNLTGNGGNNRLDGGAGHDRLNGGAGTDTLIGGSGNDSFVVDQ 1147
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT-----HGVKEGRN 436
+ E + + LG + + G D A + + +
Sbjct: 1148 AGDIVTEVSQGGIDTVETATSYTLGDNIENIVLMGLDDVNAVGNAMNNRLTGNAGINFLE 1207
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ + D+ A+A + + F E +T + +
Sbjct: 1208 GGLGDDTYVVDNVFDVAAEAANAGIDLVLSSVSFVL--GPETENLTLTGTAAISGTGNAM 1265
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
N + G A G S++++I DL+ + + N
Sbjct: 1266 NNVLTGNGGANVLSGGLG---------NDTYYVQNSNDNVIEGGGAGSDLIFSSVSYGLN 1316
Query: 557 FGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM 616
Y E +T + D+ + ++ G+D + H G + G+ F
Sbjct: 1317 GRYVERLILTGSADIDAFGNSNGNSLTGNDGNN---HLNGKGGADNLTGGLGSDIFVFEA 1373
Score = 50.6 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 48/172 (27%), Gaps = 10/172 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-----SSIGGYEKNMT--- 261
+ + G+D + N I+ S G
Sbjct: 1266 NNVLTGNGGANVLSGGLGNDTYYVQN--SNDNVIEGGGAGSDLIFSSVSYGLNGRYVERL 1323
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + G+S + + GN NN G D G G D F + A + K+ F
Sbjct: 1324 ILTGSADIDAFGNSNGNSLTGNDGNNHLNGKGGADNLTGGLGSDIFVFEASNGRDKVLDF 1383
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ A + +++ + LR I + + L+
Sbjct: 1384 QTADVDLIDISAHTGGVANFDLLRQNGADAVIDLGGGNMITVINVTTDVLVS 1435
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 42/396 (10%), Positives = 89/396 (22%), Gaps = 45/396 (11%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+ +Y G D+L+ ++ ++ + S + I ++ +VG
Sbjct: 592 GTEYLYGEEGFDILNASVTPLNYSFDFFSGLSNWASQRLSGFEGIITGVGLDHIVGDDEA 651
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN------ 331
+++ ++ G+D G G D V +
Sbjct: 652 NMIETGGGDDTLNGGYGDDTLIGGEGGDIIVAGQGGDGADWVDGGEGNDVITTSGVGDYF 711
Query: 332 -------------EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED-------- 370
+ +F+ E + D + + AS D
Sbjct: 712 GGGGNDTIRAGMDGNGIEFVDGGEGVDLLDLGLTIHDYVLNLATGAVASNPDETFVGFEL 771
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ G D + G D + A
Sbjct: 772 VFTGSGHDSITGSDGYNIIATGSGNDTVDGGAGFDDLDGGDGLDTLDYSSAGVTLAGMVV 831
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
EY+ + E++I A A+ V + + Y+
Sbjct: 832 DLSLATLTKGGQTEYVLNFENVIGAAANETYFGTVDGNRLDGGIGVDVLRGGLGDDTYVV 891
Query: 491 SYDDL----RNVFGSDRGAAARHYITHG------------VKEGRNPDAFKALEYIASHE 534
+ G+D + Y+ G + ++
Sbjct: 892 DNSNDKVFEAAGEGTDALYTSVSYMLTGRYIETVFMTGGDAIAVTGNSLNDIIVGNSAAN 951
Query: 535 DLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
L AG D G + + +
Sbjct: 952 TLTGLAGADLLDGGAGGD--LLIGGSGNDTFSVDSA 985
>gi|171916002|ref|ZP_02931472.1| glycosyl transferase, group 1 [Verrucomicrobium spinosum DSM 4136]
Length = 1982
Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats.
Identities = 51/277 (18%), Positives = 84/277 (30%), Gaps = 46/277 (16%)
Query: 383 MKHF--YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DA 439
++HF + FD+ Y+ Y HY G + +P
Sbjct: 537 LEHFLSDANAWKHRPNGLFDTTWYVAEYL----GKSGKGMIPLLHYCEIGAQLKFSPNSL 592
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE--GRFVTFDSYLYLGSYDDLRN 497
F Y+ H ++ L +++ + E FD+ YL Y
Sbjct: 593 FDVPWYLGRHPEVAK-------LPHSVLEYYLHHLTSECLQPHPLFDAAWYLEQYAPELE 645
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
A HY+ G + G +P F A Y+ + D++ L H+
Sbjct: 646 PG----ATAFSHYLDRGWRLGFSPHPSFDAKRYLDRNHDVVA-------LGMEPLRHYLG 694
Query: 557 FGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKS 614
FG++EGR+ F+P YL D+ HY+ HG E R
Sbjct: 695 FGWKEGRAPNAWFDPRDYLQRNPDVAAA----GLEPLTHYVEHGQFEDRYRERDSSLALL 750
Query: 615 VM------------NLSEKSRDKADLSLSFDHKKVDL 639
+ + DL ++ L
Sbjct: 751 GAPEPLDRYDCWLETNTFTEAAEEDLRIALTRATGSL 787
Score = 86.4 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/230 (17%), Positives = 73/230 (31%), Gaps = 35/230 (15%)
Query: 383 MKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK-EGRNPDA 439
+ + + G ++ R FD Y+ Y + H+++ + R
Sbjct: 500 LSDYLQHGTTKKRWPHPLFDGGWYVSKYRKQLSS-----KTPLEHFLSDANAWKHRPNGL 554
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE--GRFVTFDSYLYLGSYDDLRN 497
F Y+A + H+ G + FD YLG + ++
Sbjct: 555 FDTTWYVAEYLGKSGKGMIPLL-------HYCEIGAQLKFSPNSLFDVPWYLGRHPEVAK 607
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
+ +Y+ H E P F A Y+ + + H+ +
Sbjct: 608 ----LPHSVLEYYLHHLTSECLQPHPLFDAAWYLEQYA-------PELEPGATAFSHYLD 656
Query: 557 FGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
G+ G +F+ YL D+ + +HY+ G KEGRA
Sbjct: 657 RGWRLGFSPHPSFDAKRYLDRNHDVVAL----GMEPLRHYLGFGWKEGRA 702
>gi|325981484|ref|YP_004293886.1| peptidase metallopeptidase [Nitrosomonas sp. AL212]
gi|325531003|gb|ADZ25724.1| peptidase metallopeptidase [Nitrosomonas sp. AL212]
Length = 588
Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats.
Identities = 79/428 (18%), Positives = 146/428 (34%), Gaps = 98/428 (22%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE- 71
++D RD Y ++ + + P + T+ + + L +S+ ++TF+
Sbjct: 38 VSDDFSRDDYLNSNYSSFNPILYTSGTNEVT---WTIRMENNIQAILQTYSQFANITFQW 94
Query: 72 -----------ETSIH---------SDIKFIS---SNNGYVCTPRYDSRYFMEINFDKAD 108
+ + + SDI S+ + +S F+ A+
Sbjct: 95 LGDYDSFTSSIDVTPNPEDVGRVGASDINIGWIYRSDVNFAGISGGNSDNFLFNYTGGAN 154
Query: 109 VWRYG-----------IGKGTILSHNALHEIGHALGLMHPGSYNG---GYPVYGVDNDYE 154
+ T +HE+GH+LGL HP S G P+ D
Sbjct: 155 DIFLNVYAPKFNGDLTLDLNTRARQTLVHELGHSLGLSHPHSTYNVSTGKPIITTDYAAT 214
Query: 155 NDSF-----------------LTSVMSYFMPQDSMMDASFGY-CATPMVSDIVAVQKIYG 196
D ++MSY + +S + TPM+ D++A+Q+ YG
Sbjct: 215 KDLGFAQLGFRINSAEDMYKEYFTIMSYDNQHSLLPGSSVIFQAYTPMILDVIALQQAYG 274
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV----------------- 239
G+ G + +T +D+GG D +DL+ G
Sbjct: 275 EGTGTSG---LSNDTITAGVAGYRTYFDTGGIDTIDLSEYAGGAYLNMGVNITSAAHLVG 331
Query: 240 --------KNYIDLNT---------ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+N I L + G I +++ + G G+D++ G
Sbjct: 332 VSVSTFDVQNTISLGKDPANLRWFYGEYEKASGSAAADRIIGNSLDNRIDGEDGDDILTG 391
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--ENAIIVYDANEHKQDFLSD 340
N+ S G+D +G G+D Y + + R + +A+ D L +
Sbjct: 392 GGGNDSLNGSGGDDNLNGQEGIDVAIYAGSHDAFTLTRNIISGVSVHDNASIEGTDTLKE 451
Query: 341 VERLRFAD 348
+ER+ F+D
Sbjct: 452 IERISFSD 459
>gi|78183644|ref|YP_376078.1| peptidase, metallopeptidase [Synechococcus sp. CC9902]
gi|78167938|gb|ABB25035.1| Peptidase, metallopeptidases [Synechococcus sp. CC9902]
Length = 421
Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats.
Identities = 50/321 (15%), Positives = 103/321 (32%), Gaps = 29/321 (9%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE-------- 71
D Y N + + + +P ++ R + + +DL F
Sbjct: 29 DIYIHNDAGPVTISGGSFGSQDINTVKWDPQDEQFLRDVVEGIDESIDLDFNFTSNQSTA 88
Query: 72 ETSIHSDIKFISSNNGYV-CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ +I D + + G + ++ G + +HEIGH
Sbjct: 89 DVAIFLDTEISLDDGGDTLGLAVSNRNNSNGYFWEIFLNEPKFDGDQDYFRYALIHEIGH 148
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
LGL HP N G V G+ + +++ +VM+Y P + + +D A
Sbjct: 149 TLGLEHPFEDNDGDVVDGITDPWKSLYPEDTVMAYRNPAN------GRWPNDYTSNDKAA 202
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTES 249
+ +++G + + ++ + + + + G D + N I
Sbjct: 203 LIELWG-QETNPTPSVTPEKPNGLSAQVMDSNSTRFKGTSKADWIIGNDGNNTI------ 255
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
N + + + G++GND + G +++ G+D+ G G D
Sbjct: 256 ----KAKGGNDYLQGGLGNDRLNGNNGNDTLRGGDGDDIIHGGKGSDIIRGGRGAD--VL 309
Query: 310 YAPSYLYKIYRFENAIIVYDA 330
Y S +
Sbjct: 310 YGNSGQNTFSSTADGSTDIIN 330
>gi|17227860|ref|NP_484408.1| hypothetical protein all0364 [Nostoc sp. PCC 7120]
gi|17129709|dbj|BAB72322.1| all0364 [Nostoc sp. PCC 7120]
Length = 900
Score = 114 bits (284), Expect = 6e-23, Method: Composition-based stats.
Identities = 80/467 (17%), Positives = 123/467 (26%), Gaps = 80/467 (17%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+YG N+ Y + T+ DS G D ++ I +Y++LN S S +
Sbjct: 478 LYG--DADTINDTY-FYTNEYGFYGSTTLTDSSGTDTINAAAITAD-SYLNLNPGSTSIL 533
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF----- 308
G +TI+ T IE+ G GND +IGNSA NV GND DG G DT
Sbjct: 534 NGTV--LTISTGTTIENAFGGDGNDTIIGNSAANVLHGGRGNDTLDGGVGNDTLRGGRGN 591
Query: 309 --YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYT 365
Y S + N I + ++VE L I+ + +
Sbjct: 592 DTYIVNSTGDIVTENANEGIDTVQSSVTYTLGANVENLTLTGTGAINGTGNSLNNTITGN 651
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGA 421
+ L G D + G D + + S D +
Sbjct: 652 SGNNTLNGDAGNDFLIAGNGNDILNGGTGNDTMLGGGGNDTYIVDSIGDYVLENANQGTD 711
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ I++ + ++ + G
Sbjct: 712 LVQSSISYTL--------------------------------GNSLENLTLTGTSAINGT 739
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
+ G D L A + L+
Sbjct: 740 GNRLNNVITGN--------------------SGNNTLNGGDGNDTLNGSAGVDTLLGGNG 779
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
+ + G D + G TFN D F G
Sbjct: 780 NDILVGGTGND--TLTGGVGRDRFTFNSRS---EGIDRITDFNVVDDTIVVSAAGFGGGL 834
Query: 602 GRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
I+ QF + A +D L+ D G G
Sbjct: 835 VVGAAIASSQFLLGSAATT-----ASHRFLYDRNNGALFFDQDGTGA 876
Score = 80.2 bits (196), Expect = 9e-13, Method: Composition-based stats.
Identities = 51/335 (15%), Positives = 88/335 (26%), Gaps = 38/335 (11%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
G T Y E F + G TI + + L N G
Sbjct: 479 YGDADTINDTYFYTNEYGFYGSTTLTDSSGTDTINAAAITADSYLNL--------NPGST 530
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS--LG 203
+ T ++ + + + + G G
Sbjct: 531 SILNGTVLTISTGTTIENAFGGDGNDTIIGNSAANVLHGGRGNDTLDGGVGNDTLRGGRG 590
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI---GGVKNYIDLNTESWSSIGGYEKNM 260
N+ Y + I T + G D + ++ G + L + G N
Sbjct: 591 NDTYIVNSTGD----IVTENANEGIDTVQSSVTYTLGANVENLTLTGTGAINGTGNSLNN 646
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI ++ ++ G +GND +I + N++ +GND G G DT+ S +
Sbjct: 647 TITGNSGNNTLNGDAGNDFLIAGNGNDILNGGTGNDTMLGGGGNDTYIVD--SIGDYVLE 704
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFAD-------------------QCIDSVNVKQRSI 361
N + + +E L
Sbjct: 705 NANQGTDLVQSSISYTLGNSLENLTLTGTSAINGTGNRLNNVITGNSGNNTLNGGDGNDT 764
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
L +A + L+ G D+ GRD
Sbjct: 765 LNGSAGVDTLLGGNGNDILVGGTGNDTLTGGVGRD 799
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/294 (14%), Positives = 81/294 (27%), Gaps = 28/294 (9%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E + D N D R G G T + ++ +
Sbjct: 547 ENAFGGDGNDTIIGNSAANVLHGGRGNDTLDGGVGNDTLRGGRGNDTYIVNSTGDIVTEN 606
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+ G V + LT + +S+ + G ++
Sbjct: 607 ---ANEGIDTVQSSVTYTLGANVENLTLTGTGAINGTGNSLNNTITGNSGNNTLNGDAGN 663
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-----------K 240
+ + N + I DS GD +L+ G
Sbjct: 664 DFLIAGNGNDILNGGTGNDTMLGGGGNDTYIVDSIGDYVLENANQGTDLVQSSISYTLGN 723
Query: 241 NYIDLNTESWSSIGGY-----------EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ +L S+I G N T+ +++ GS+G D ++G + N++
Sbjct: 724 SLENLTLTGTSAINGTGNRLNNVITGNSGNNTLNGGDGNDTLNGSAGVDTLLGGNGNDIL 783
Query: 290 FESSGNDVFDGSSGLDTFFYYA---PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+GND G G D F + + + + IV A +
Sbjct: 784 VGGTGNDTLTGGVGRDRFTFNSRSEGIDRITDFNVVDDTIVVSAAGFGGGLVVG 837
>gi|167034350|ref|YP_001669581.1| heme peroxidase [Pseudomonas putida GB-1]
gi|166860838|gb|ABY99245.1| Animal haem peroxidase [Pseudomonas putida GB-1]
Length = 3608
Score = 114 bits (284), Expect = 7e-23, Method: Composition-based stats.
Identities = 55/362 (15%), Positives = 108/362 (29%), Gaps = 41/362 (11%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + +TE ++ + +L ++ ++ E + F + N T
Sbjct: 3245 DTFVVDNVGDTVTEALNGGTDLVQTSLASYTLGANV--ENLTYTGSSAFTGTGNALANTI 3302
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + AD G+G T + + V
Sbjct: 3303 TGGAGNDLLNGGAGADRLVGGVGNDTYVV-------------------DNAGDVVVEATG 3343
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D T++ SY M + G + +A A +L +
Sbjct: 3344 AGTDLVRTTLASYTMAANVENLTYTGVGNFSGTGNGLANIINGAAGNDTLAGD--GGNDI 3401
Query: 213 QKDSPFIQTIYDSGGDDLL--------------DLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ T+ G+D L D +L GG N L ++ G
Sbjct: 3402 LNGNAGNDTLNGDAGNDQLFGGLGADRLNGGGGDDSLDGGDGNDTLLGDAGNDTLLGGAG 3461
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ ++ +S+ G GND + G+ + +GND +G+ G DT + +
Sbjct: 3462 DDSLDGGNGNDSLQGGDGNDTLFGDVGTDTLIGGAGNDFLNGAGGNDTVV--GGAGNDTM 3519
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + A D + + + + Q + + + AS I +G D
Sbjct: 3520 MATDGNDVFQFAAGFGNDLIINFDAIAAGGQDRLDITALNITAATFAAS--VTIADVGAD 3577
Query: 379 VF 380
Sbjct: 3578 TL 3579
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/336 (13%), Positives = 86/336 (25%), Gaps = 9/336 (2%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
TL GG N + + G + +++ G D++ G N++
Sbjct: 3174 TLTGGAGNDVISGLGGNDILNGLAGADQLFGGVGNDTLNGGDDADLLNGEDGNDILNGGL 3233
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G DV +G +G DTF + + ++VE L + +
Sbjct: 3234 GADVMNGGAGNDTFVVD-NVGDTVTEALNGGTDLVQTSLASYTLGANVENLTYTGSSAFT 3292
Query: 354 V-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL-SEGRDITFDSYLYLGSYDDL 411
+ + A + L G D + + + G + +
Sbjct: 3293 GTGNALANTITGGAGNDLLNGGAGADRLVGGVGNDTYVVDNAGDVVVEATGAGTDLVRTT 3352
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ Y G G + A ++ L + G D +
Sbjct: 3353 LASYTMAANVENLTYTGVGNFSGTGNGLANIINGAAGNDTLAGDGGNDILNGNAGNDTLN 3412
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH------GVKEGRNPDAFK 525
+ F + G D G G +
Sbjct: 3413 GDAGNDQLFGGLGADRLNGGGGDDSLDGGDGNDTLLGDAGNDTLLGGAGDDSLDGGNGND 3472
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
+L+ ++ L + AG D + G +
Sbjct: 3473 SLQGGDGNDTLFGDVGTDTLIGGAGNDFLNGAGGND 3508
Score = 83.7 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 39/311 (12%), Positives = 77/311 (24%), Gaps = 20/311 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA + G V + + L N +L S+ G
Sbjct: 3234 GADVMNGGAGNDTFVVDNVGDTVTEALNGGTDLVQTSLASYTLGANVENLTYTGSSAFTG 3293
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + ++ G +GND++ G + + GND + + D +
Sbjct: 3294 T-------GNALANTITGGAGNDLLNGGAGADRLVGGVGNDTYVVDNAGDVVVEATGAGT 3346
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
+ + + ++VE L + +I+ A + L
Sbjct: 3347 DLVRTTLASYTM----------AANVENLTYTGVGNFSGTGNGLANIINGAAGNDTLAGD 3396
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D+ G D F + G
Sbjct: 3397 GGNDILNGNAGNDTLNGDAGNDQLFGGLGADRLNGGGGDDSLDGGDGNDTLLGDAGNDTL 3456
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE--GRFVTFDSYLYLGSY 492
+L+ ++ L + VG D + D+ +
Sbjct: 3457 LGGAGDDSLDGGNGNDSLQGGDGNDTLFGDVGTDTLIGGAGNDFLNGAGGNDTVVGGAGN 3516
Query: 493 DDLRNVFGSDR 503
D + G+D
Sbjct: 3517 DTMMATDGNDV 3527
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/286 (15%), Positives = 82/286 (28%), Gaps = 29/286 (10%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + I +++E ++ G N I + + G +G+D++ ++ GND
Sbjct: 2437 GTNGDDILVSSEGDDTVWGDAGNDRIEGGDGNDQLRGGAGDDIISDMGGDDNIQGGDGND 2496
Query: 297 VFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----DVERLR 345
V G +G++ F + + + + ++QD + +E+
Sbjct: 2497 VLHGGNGVNLIIGGFGNDFIVTGEDASEAIGGQGNDFILGSKANEQDMGNEGDDWIEKGT 2556
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
D+ + + + I D F S G F
Sbjct: 2557 SDGAPGDNFDPLGNDPI---IGNDVFIGGNENDKFNGEGGDDIMVGSLG----FGDRYIG 2609
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
GS D G + GV + F S + F L
Sbjct: 2610 GSGYDWATFKG----------LAQGVTIDYSDRFFDVPPVPGSGASALVRFDIMEGLSGS 2659
Query: 466 GKDHFSNFGCEEGRF-VTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
F E+ T + + + L N S A A Y
Sbjct: 2660 AHGDFLRGDNEDAASLPTNGATGSVLTNISLINGLSSLLAAGATFY 2705
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 47/317 (14%), Positives = 91/317 (28%), Gaps = 29/317 (9%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ L G N I ++ + ++ G + + ++V+G +G+D++ + +N +
Sbjct: 906 VVLGGTSGNDIIISGDGDDTVYGDAGDDVLEGGAGNDAVLGGAGDDIITDSFGDNRLEGN 965
Query: 293 SGNDVFD------------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDA----NEHKQD 336
+GNDV G G D F + + + + A +
Sbjct: 966 AGNDVIVAGSMLAAGNLILGGDGQD--FIITTEDISTTFGGQGDDFILGAKTNLPPTGNE 1023
Query: 337 FLSDVERLRFADQCIDSVNVK------QRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+E+ D+ I ++++I G D+F +
Sbjct: 1024 GDDWIEKGTQDGAPGDNFAPLLGDEVVGNDIFVGGGGFDEMIGEGGDDIFVGSDAQDKMD 1083
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G D + +G DL + A + GV L+ A E
Sbjct: 1084 GMSGFDWITNKNDKVGVTVDLSLAALAQPHGNAPN-QNAGVFNPVGASPASILDRFAEVE 1142
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
+ + + L G L + G A +
Sbjct: 1143 GVSGSNYADVLKGDDVDAVTILNHGGATGSALTNVALIRGLQQFLADAGLPTTGFATGNI 1202
Query: 511 ITHGVK----EGRNPDA 523
+ G EGR D
Sbjct: 1203 MLGGNGSDLIEGRGGDD 1219
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 61/185 (32%), Gaps = 18/185 (9%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+S E ++ + + + ++ G+D V G++ ++V +GND G +G D
Sbjct: 892 GPDSNYLHYTGEDHVVLGGTSGNDIIISGDGDDTVYGDAGDDVLEGGAGNDAVLGGAGDD 951
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDAN----------EHKQDFLSDVERL--RFADQCIDS 353
++ ++ + QDF+ E + F Q D
Sbjct: 952 II--TDSFGDNRLEGNAGNDVIVAGSMLAAGNLILGGDGQDFIITTEDISTTFGGQGDDF 1009
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ + ++ +D I+ QD F G ++ + G D
Sbjct: 1010 ILGAKTNLPPTGNEGDDWIEKGTQDGAPG----DNFAPLLGDEVVGNDIFVGGGGFDEMI 1065
Query: 414 VFGSD 418
G D
Sbjct: 1066 GEGGD 1070
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 66/261 (25%), Gaps = 57/261 (21%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+S +++ + + +V S G+D V G++ N+ GND G +G D
Sbjct: 2419 GPDSNYIRYAGAEHIVLGGTNGDDILVSSEGDDTVWGDAGNDRIEGGDGNDQLRGGAGDD 2478
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + +L
Sbjct: 2479 -------------------------------------IISDMGGDDNIQGGDGNDVLHGG 2501
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+I G D + + E +G D S D G
Sbjct: 2502 NGVNLIIGGFGNDFIVTGEDASEAIGGQGNDFILGSK-----------ANEQDMGNEGDD 2550
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TF 483
+I G +G D F L + + D F+ G ++ F
Sbjct: 2551 WIEKGTSDGAPGDNFDPLGN-------DPIIGNDVFIGGNENDKFNGEGGDDIMVGSLGF 2603
Query: 484 DSYLYLGSYDDLRNVFGSDRG 504
GS D G +G
Sbjct: 2604 GDRYIGGSGYDWATFKGLAQG 2624
Score = 39.8 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSV 354
+ +G+ DT + + Y + NA+IV D A D L+ +ERL+F+D+ S
Sbjct: 2781 ILNGTDNYDTAVFSGVATDYSVVVDGNAVIVTDLVAGRDGVDHLTGIERLQFSDRSQASG 2840
Query: 355 NVKQRSI 361
+
Sbjct: 2841 VGTAVNA 2847
>gi|163742500|ref|ZP_02149886.1| Peptidase, metallopeptidase [Phaeobacter gallaeciensis 2.10]
gi|161384085|gb|EDQ08468.1| Peptidase, metallopeptidase [Phaeobacter gallaeciensis 2.10]
Length = 413
Score = 114 bits (284), Expect = 7e-23, Method: Composition-based stats.
Identities = 60/373 (16%), Positives = 105/373 (28%), Gaps = 63/373 (16%)
Query: 45 TELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINF 104
+ + +++ R L + + + F E I + +
Sbjct: 58 WSFDEDQRDIFREGLSLYEDISGVRFIEVEGRGMINAFGTTGSSAGGWANIAMSGNGFTG 117
Query: 105 DKADVWRYGI-GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
+ KGT LHEIGH LGL H G+ D D+ +VM
Sbjct: 118 RGDLTVDTDVMTKGTYGYVTVLHEIGHTLGLQHSHDG-------GLTLDRHTDTPENTVM 170
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
+Y Y DI A+Q +YG G I
Sbjct: 171 TYNHSP--------AYVTELGTFDIQAMQHLYGNSDSFTGWEILG--------------- 207
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
GG D + + + I T+ ++I + + +++ G+ G D ++G
Sbjct: 208 --GGSDPIIIRSTDASETVI--GTDQNTTINAKGGHDHVQGREADDTLRGADGRDTMVGG 263
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ F +G D+ G +G D Y S +Y ++
Sbjct: 264 LGEDRLFGGNGADLLIGGTGGD--AYSGGSDDDVLYGNRGHDML---------------- 305
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
L + L+ G D F + +
Sbjct: 306 ----------HGGSGNDHLLGGIGRDTLVGGDGSDTLTGGTGADTFVFDQADAFDTNRIT 355
Query: 404 YLGSYDDLRNVFG 416
G D+ ++ G
Sbjct: 356 DFGRGADVIDLSG 368
>gi|192289967|ref|YP_001990572.1| 5'-nucleotidase [Rhodopseudomonas palustris TIE-1]
gi|192283716|gb|ACF00097.1| 5'-Nucleotidase domain protein [Rhodopseudomonas palustris TIE-1]
Length = 2775
Score = 114 bits (284), Expect = 7e-23, Method: Composition-based stats.
Identities = 63/371 (16%), Positives = 107/371 (28%), Gaps = 37/371 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+V + I G D + L D + G + N I
Sbjct: 2257 GDDVALSTAAGGFVIDGGAGSDTIAL----------DYTYSGDDVLSGGDGNDYIYAGAG 2306
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY-RFENAII 326
+ + G + ND + GN +++ +G+D DG +G DT Y Y + + ++
Sbjct: 2307 NDQIDGGADNDTLFGNDGDDLIKGGAGDDTIDGGAGADTATYAGNFVGYAMSLNTDGSLT 2366
Query: 327 VYD-ANEHKQDFLSDVERLRFADQC----------IDSVNVKQRSILEYTASYEDLIQVI 375
V D A + D LS++E+L FAD ++ A + I
Sbjct: 2367 VTDQAGTNGTDKLSNIEQLGFADGTWTLRTGTDGNDTITGGTGNDLVFGGAGNDTFIGGY 2426
Query: 376 GQDVFESMKHFYEFGLSE-GRDITFDSYLYLGSYDDLRNVFG--------SDRGAAARHY 426
G D ++ S G +T D Y D
Sbjct: 2427 GLDRYDGGAGEDTIDYSLIGFKLTVDLGAGRAYYPDYLTGADHLSSIENVIGTAFGDTLI 2486
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
T GV L A ++ LI D G D + ++ D+
Sbjct: 2487 GTDGVNVLNGGLGDDQLLGGAGNDTLIGGGGDDVLRGGAGDDTIDGGAGFDTLDLS-DAT 2545
Query: 487 LYLGSYDDLRNVFGSDRG-----AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
L G+ G + + G + + ++ +
Sbjct: 2546 GALTINFTAGTATGAGIGTDHFASIESFILGEGADRVTGGNGADVINGGGGNDVIAGGAG 2605
Query: 542 DAPDLVQAGKD 552
+ L AG D
Sbjct: 2606 NDKLLGGAGDD 2616
Score = 99.1 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/443 (11%), Positives = 101/443 (22%), Gaps = 62/443 (13%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
SD + D G T+ ++ I G
Sbjct: 2276 GSDTIALDYTYSGDDVLSGGDGNDYIYAGAGNDQIDGGADNDTLFGNDGDDLIKGGAG-- 2333
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
Y + ++ ++ D + T +S+I +
Sbjct: 2334 ---DDTIDGGAGADTATYAGNFVGYAMSLNTDGSLTVTDQAGT-NGTDKLSNIEQLGFAD 2389
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYID----- 244
G G + ++ G+D D G ++ ID
Sbjct: 2390 GTWTLRTGTD---GNDTITGGTGNDLVFGGAGNDTFIGGYGLDRYDGGAGEDTIDYSLIG 2446
Query: 245 ------------------------------LNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ T ++ G + + + ++G
Sbjct: 2447 FKLTVDLGAGRAYYPDYLTGADHLSSIENVIGTAFGDTLIGTDGVNVLNGGLGDDQLLGG 2506
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+GND +IG ++V +G+D DG +G DT + I
Sbjct: 2507 AGNDTLIGGGGDDVLRGGAGDDTIDGGAGFDTLDLSDATGALTINFTAGTAT---GAGIG 2563
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D + +E + ++ + + G D G
Sbjct: 2564 TDHFASIESFILGEGADRVTGGNGADVINGGGGNDVIAGGAGNDKLLGGAGDDSLDGGSG 2623
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
D+ D L+ G D + L A ++ +
Sbjct: 2624 DDVV----DGGIGNDTLKGGSGVDVISGGDGNDDI-----DGGSENDILNGGAGNDIIKG 2674
Query: 455 AFADAPDLVQVGKDHFSNFGCEE 477
G D + +
Sbjct: 2675 GSGADIITGGAGNDILTGGSGAD 2697
Score = 91.0 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 81/531 (15%), Positives = 127/531 (23%), Gaps = 62/531 (11%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+S + D+ + I LG + + + +D
Sbjct: 2218 NNSGSIVATGGSAIDMGAGNDQVNLYVGATVTGTIL--LGAGDDVALSTAAGGFVIDGGA 2275
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA-PKGSLGNNIYKIEVQ 212
+D+ S D + A Q GA GN+ +
Sbjct: 2276 GSDTIALDYTYSGDDVLSGGDGNDYIYAGAGND-----QIDGGADNDTLFGND---GDDL 2327
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN----------MTI 262
K TI G D S + N +
Sbjct: 2328 IKGGAGDDTIDGGAGADTATYAGNFVGYAMSLNTDGSLTVTDQAGTNGTDKLSNIEQLGF 2387
Query: 263 AQHT--------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
A T +++ G +GND+V G + N+ F G D +DG +G DT Y +
Sbjct: 2388 ADGTWTLRTGTDGNDTITGGTGNDLVFGGAGNDTFIGGYGLDRYDGGAGEDTIDYSLIGF 2447
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVER---------LRFADQCIDSVNVKQRSILEYT 365
+ D D LS +E L D L
Sbjct: 2448 KLTVDLGAGRAYYPDYLT-GADHLSSIENVIGTAFGDTLIGTDGVNVLNGGLGDDQLLGG 2506
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG------SYDDLRNVFGSDR 419
A + LI G DV G D S + G+D
Sbjct: 2507 AGNDTLIGGGGDDVLRGGAGDDTIDGGAGFDTLDLSDATGALTINFTAGTATGAGIGTDH 2566
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
A+ +I + + D+I A L+ D + G +
Sbjct: 2567 FASIESFILGEGADRVTGGNGADVINGGGGNDVIAGGAGNDKLLGGAGDDSLDGGSGDDV 2626
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
L + + G D L A ++ +
Sbjct: 2627 VDGGIGNDTLKGGSGVDVISGGDGNDDID-----------GGSENDILNGGAGNDIIKGG 2675
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
AG D G F D+ F + S+A
Sbjct: 2676 SGADIITGGAGND--ILTGGSGADVFVFAAGFG----KDIVTDFATKGSSA 2720
Score = 87.9 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 58/343 (16%), Positives = 94/343 (27%), Gaps = 22/343 (6%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL-GLMHPGSYNG 142
+ T + + D + G G I ++L G
Sbjct: 2396 TGTDGNDTITGGTGNDLVFGGAGNDTFIGGYGLDRYDGGAGEDTIDYSLIGFKLTVDLGA 2455
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
G Y + + D+++ + D Q + GA +L
Sbjct: 2456 GRAYYPDYLTGADHLSSIENVIGTAFGDTLIGTDGVNVLNGGLGDD---QLLGGAGNDTL 2512
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + TI G D LDL+ G I+ + + G +
Sbjct: 2513 IGG--GGDDVLRGGAGDDTIDGGAGFDTLDLSDATGAL-TINFTAGTATGAGIGTDHF-- 2567
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
IES + G D V G + +V GNDV G +G D A
Sbjct: 2568 ---ASIESFILGEGADRVTGGNGADVINGGGGNDVIAGGAGNDKLLGGAGDDSLD----G 2620
Query: 323 NAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ D L S V+ + D D + IL A + + G D+
Sbjct: 2621 GSGDDVVDGGIGNDTLKGGSGVDVISGGDGNDDIDGGSENDILNGGAGNDIIKGGSGADI 2680
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
G D+ G D+ F + +A
Sbjct: 2681 ITGGAGNDILTGGSGADV---FVFAAGFGKDIVTDFATKGSSA 2720
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/326 (16%), Positives = 93/326 (28%), Gaps = 24/326 (7%)
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT 118
L V+ F +T I +D + + + I DV R G G T
Sbjct: 2470 LSSIENVIGTAFGDTLIGTDGVNVLNGGLGDDQLLGGAGNDTLIGGGGDDVLRGGAGDDT 2529
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
I L L G + + + F+ + + G
Sbjct: 2530 IDGGAGFD----TLDLSDATGALTINFTAGTATGAGIGTDHFASIESFILGEGADRVTGG 2585
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
+ V G G + ++ GDD++D GG
Sbjct: 2586 --------NGADVINGGGGNDVIAGG---AGNDKLLGGAGDDSLDGGSGDDVVD----GG 2630
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ N I G + N I + + + G +GND++ G S ++ +GND+
Sbjct: 2631 IGNDTLKGGSGVDVISGGDGNDDIDGGSENDILNGGAGNDIIKGGSGADIITGGAGNDIL 2690
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G SG D F + A + F + S F D + V
Sbjct: 2691 TGGSGADVFVFAAGFGKDIVTDFA-----TKGSSADVLQFSSSMFANFTDVMSHTAQVGN 2745
Query: 359 RSILEYTASYEDLIQVIGQDVFESMK 384
++ A + + +
Sbjct: 2746 DVVVTLDADNSVTLANLQIGSLAADD 2771
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/374 (13%), Positives = 93/374 (24%), Gaps = 34/374 (9%)
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
+ + ++ Y +D + D + P +G+
Sbjct: 1595 NFAAEGTEQDAFAEYMAAKYSETAYGEVDTDRAHDTRIQNLDYRTDTVLLSVPVDLVGD- 1653
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY-----EKNM 260
+ + + T+ GGDD+L + D + G +
Sbjct: 1654 --EGDNDFTGASGDDTLVGLGGDDVLIGLGGDDNLDGGDGDDTLDGGDGDDILAGGAGDD 1711
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK--- 317
T+ + + G G+D +IG ++V G D G +G D
Sbjct: 1712 TLDGGAGDDRLAGGDGDDTLIGGDGDDVLIGGEGYDTLHGGAGNDELVVGEGDSADGGDG 1771
Query: 318 ----IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ E+ I D + + L T + E+L
Sbjct: 1772 DDLFVVSTEDGIPSSIDGGDGNDTVKLI--------------GSGTGSLTATLNVENLRV 1817
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G + + + +G T S L + D + G + +
Sbjct: 1818 AEGNWSVAGSEAYDRVTVQQG--ATLSSSLVVDHNDRIVIDAGGKLVVSGN---ALAWQG 1872
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
G + A E S L +A L G + +
Sbjct: 1873 GGDAIVDNAGEIDGSARALTSAAGATGSLTLNNAVGGVVRGTVTPQQAGQADATITINNA 1932
Query: 494 DLRNVFGSDRGAAA 507
L G A
Sbjct: 1933 GLIEANGRALDFRA 1946
>gi|148261173|ref|YP_001235300.1| glycosyl transferase family protein [Acidiphilium cryptum JF-5]
gi|146402854|gb|ABQ31381.1| glycosyl transferase, family 2 [Acidiphilium cryptum JF-5]
Length = 995
Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 71/220 (32%), Gaps = 26/220 (11%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD Y + D+ G D A +Y+ G + G +P F Y AS+ D+
Sbjct: 21 LFDPVWYALRHPDIAA--GRDEAALLEYYLAVGGRLGHSPSPLFDEGFYRASNPDIAALV 78
Query: 457 ADAPDLVQVGKDHFSNFGCEE-GRFVTFDSYLYLG-------SYDDLRNVFGSDRGAAAR 508
A+ G DHF +G FD LY D FG
Sbjct: 79 AEGG--YASGFDHFCQYGHRGLSPHWLFDDTLYGDLHADMSLENLDRHRCFG-----RYD 131
Query: 509 HYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY----EEGR 563
H++ G +E R F + Y E A H+ + E
Sbjct: 132 HWLKSGQREQRICHFLFDSAFYRREVE--AAGEGAARLESMGPFVHYLYALWDDTPERAT 189
Query: 564 SITFNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEG 602
S F+P Y ++ + R A HYIT G G
Sbjct: 190 SPYFDPAWYAAMHESARDDIAEGRARNALHHYITRGEAAG 229
Score = 91.4 bits (225), Expect = 4e-16, Method: Composition-based stats.
Identities = 49/300 (16%), Positives = 87/300 (29%), Gaps = 58/300 (19%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNV 414
+ Y + D+ G+D ++++ G G FD Y S D+ +
Sbjct: 20 ALFDPVWYALRHPDI--AAGRDEAALLEYYLAVGGRLGHSPSPLFDEGFYRASNPDIAAL 77
Query: 415 FGSDR-GAAARHYITHGVKEGRNPDAFKALEYIASHEDL--------------------- 452
+ H+ +G + F Y H D+
Sbjct: 78 VAEGGYASGFDHFCQYGHRGLSPHWLFDDTLYGDLHADMSLENLDRHRCFGRYDHWLKSG 137
Query: 453 ---------------------INAFADAPDLVQVGKDHFSNFGCEEGR----FVTFDSYL 487
A H+ ++ FD
Sbjct: 138 QREQRICHFLFDSAFYRREVEAAGEGAARLESMGPFVHYLYALWDDTPERATSPYFDPAW 197
Query: 488 YLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPD 545
Y ++ R+ R A HYIT G G +P F ++ +++D+ A
Sbjct: 198 YAAMHESARDDIAEGRARNALHHYITRGEAAGFDPVPEFSERYHLDTYDDIAAAV--EAG 255
Query: 546 LVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEG 602
+ ++G HF +G E R + Y + + N + A H T G++EG
Sbjct: 256 VFRSGYHHFVRYGTLELRRPRADIDLIYYRDTNPRVRNDLAAGAVRDAFAHLRTIGLREG 315
>gi|296532479|ref|ZP_06895198.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296267196|gb|EFH13102.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 487
Score = 113 bits (283), Expect = 9e-23, Method: Composition-based stats.
Identities = 65/294 (22%), Positives = 104/294 (35%), Gaps = 35/294 (11%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGR-DITF 399
RL F+ I++ + + SY L IG+ + + + GL
Sbjct: 10 RLGFSFYDINNGRFEADPAISVGFSYGVLTFFIGRSGVLTYAPEAVSIAGLPLDTGTPLI 69
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFAD 458
Y + D+ +A HY G +EGR F Y+ ++D+ A +
Sbjct: 70 ADLAYQLANTDVLAA----GISAEAHYAQFGWREGRATGSLFDGAYYLRVNQDVREAGIN 125
Query: 459 APDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
+H+ NFG EGR FD+ YL D+ + HY+ G
Sbjct: 126 P-------VEHYLNFGWREGRDPNPLFDTSFYLAQNADVAEAGIN----PLEHYLLWGRH 174
Query: 517 EGRNPDAF-KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYL 573
E R+ + F A Y+ H +L+ P H+S G+ EG S F +YL
Sbjct: 175 EARDANPFFDAGFYLQQHPELVE-IGADPL------AHYSEQGWREGIAASRGFITKVYL 227
Query: 574 TSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKAD 627
D+ +HY+ +G EGRA+ + + D
Sbjct: 228 AQNPDVAAA----GIDPLRHYLEYGQAEGRAVSSGTPASITGRLTASTDEDSGA 277
>gi|209966394|ref|YP_002299309.1| hypothetical protein RC1_3132 [Rhodospirillum centenum SW]
gi|209959860|gb|ACJ00497.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 2485
Score = 113 bits (283), Expect = 9e-23, Method: Composition-based stats.
Identities = 59/274 (21%), Positives = 95/274 (34%), Gaps = 20/274 (7%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G NI +V + G + + + + YI L + ++ G + T
Sbjct: 2191 SGTNIELRDVDYAVVTGSVFVTGGTGSN---VVIGDDARQYIRLGPD-DDTLRGGGGDDT 2246
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G GND V G + +G+D DG SG+D A +
Sbjct: 2247 VGSGEGRDLLYGDEGNDSVFGGEGYDRLSGGTGDDTIDGGSGVDVVRIEAARSAVTLEAT 2306
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCI------------DSVNVKQRSILEYTASYE 369
+ D S VE +RF DQ + +
Sbjct: 2307 GPWGVRLSGAATGTDVASGVELIRFDDQVVYVTLPVRFEAVQPDGGGAFDEAFYLAQWAD 2366
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDL-RNVFGSDRGAAARHY 426
V ++H+ FG +EGRD T FD YL + D+ V + HY
Sbjct: 2367 VRAAVADGRFQSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAVEAGQFHSGYEHY 2426
Query: 427 ITHGVKEGRNPDA-FKALEYIASHEDLINAFADA 459
+ G +E R+P A F Y+ + D+ +A D
Sbjct: 2427 LAFGWREDRDPSAWFDLSAYLQRNPDVADAGIDP 2460
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/316 (14%), Positives = 89/316 (28%), Gaps = 32/316 (10%)
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D + ++ + +++ D D + LR + + R +L
Sbjct: 2198 RDVDYAVVTGSVFVTGGTGSNVVIGDDARQYIRLGPDDDTLRGGGGDDTVGSGEGRDLLY 2257
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ + G D G D+ + + A
Sbjct: 2258 GDEGNDSVFGGEGYDRLSGGTGDDTIDGGSGVDVVR-----------IEAARSAVTLEAT 2306
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ + + + +D + V D F
Sbjct: 2307 GPWGVR-LSGAATGTDVASGVELIRFDDQVVYVTLPVRFEAVQPDGGGA----------F 2355
Query: 484 DSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
D YL + D+R + HY+ G EGR+P F Y+A D+ A
Sbjct: 2356 DEAFYLAQWADVRAAVADGRFQSGLEHYLAFGQAEGRDPTPLFDEEAYLARWADVRVAV- 2414
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+G +H+ FG+ E R + F+ YL D+ + +H++ G+
Sbjct: 2415 -EAGQFHSGYEHYLAFGWREDRDPSAWFDLSAYLQRNPDVADA----GIDPLRHWLVWGI 2469
Query: 600 KEGRALGISGMQFKSV 615
E R +
Sbjct: 2470 GEDRIATAADTGLWLA 2485
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 77/283 (27%), Gaps = 41/283 (14%)
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + + ++ + + R + + L G D S
Sbjct: 2191 SGTNIELRDVDYAVVTGSVFVTGGTGSNVVIGDDARQYIRLGPDDDTLRGGGGDDTVGSG 2250
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ EG D F Y D L G D
Sbjct: 2251 EGRDLLYGDEGNDSVFGGEGY----DRLSGGTGDDTIDG--------------------- 2285
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ +A + G D + + D+
Sbjct: 2286 -----GSGVDVVRIEAARSAVTLEATGPWGVRLSGAATGTDVA------SGVELIRFDDQ 2334
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ + AF Y+A D+ A AD Q+G +H+ FG EGR
Sbjct: 2335 VVYVTLPVRFEAVQPDGGGAFDEAFYLAQWADVRAAVAD--GRFQSGLEHYLAFGQAEGR 2392
Query: 564 SIT--FNPDLYLTSYDDLWNVFGSDRS-AAAQHYITHGMKEGR 603
T F+ + YL + D+ + + + +HY+ G +E R
Sbjct: 2393 DPTPLFDEEAYLARWADVRVAVEAGQFHSGYEHYLAFGWREDR 2435
>gi|326404578|ref|YP_004284660.1| putative glycosyltransferase [Acidiphilium multivorum AIU301]
gi|325051440|dbj|BAJ81778.1| putative glycosyltransferase [Acidiphilium multivorum AIU301]
Length = 995
Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/220 (22%), Positives = 71/220 (32%), Gaps = 26/220 (11%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD Y + D+ G D A +Y+ G + G +P F Y AS+ D+
Sbjct: 21 LFDPVWYALRHPDIAA--GRDEAALLEYYLAVGGRLGHSPSPLFDEGFYRASNPDIAALV 78
Query: 457 ADAPDLVQVGKDHFSNFGCEE-GRFVTFDSYLYLG-------SYDDLRNVFGSDRGAAAR 508
A+ G DHF +G FD LY D FG
Sbjct: 79 AEGG--YASGFDHFCQYGHRGLSPHWLFDDTLYGDLHADMSLENLDRHRCFG-----RYD 131
Query: 509 HYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY----EEGR 563
H++ G +E R F + Y E A H+ + E
Sbjct: 132 HWLKSGQREQRICHFLFDSAFYRREVE--AAGEGAARLESMGPFVHYLYALWDDTPERAT 189
Query: 564 SITFNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEG 602
S F+P Y ++ + R A HY+T G G
Sbjct: 190 SPYFDPAWYAAMHESARDDIAEGRARNALHHYVTRGEAAG 229
Score = 91.0 bits (224), Expect = 7e-16, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 87/300 (29%), Gaps = 58/300 (19%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNV 414
+ Y + D+ G+D ++++ G G FD Y S D+ +
Sbjct: 20 ALFDPVWYALRHPDI--AAGRDEAALLEYYLAVGGRLGHSPSPLFDEGFYRASNPDIAAL 77
Query: 415 FGSDR-GAAARHYITHGVKEGRNPDAFKALEYIASHEDL--------------------- 452
+ H+ +G + F Y H D+
Sbjct: 78 VAEGGYASGFDHFCQYGHRGLSPHWLFDDTLYGDLHADMSLENLDRHRCFGRYDHWLKSG 137
Query: 453 ---------------------INAFADAPDLVQVGKDHFSNFGCEEGR----FVTFDSYL 487
A H+ ++ FD
Sbjct: 138 QREQRICHFLFDSAFYRREVEAAGEGAARLESMGPFVHYLYALWDDTPERATSPYFDPAW 197
Query: 488 YLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPD 545
Y ++ R+ R A HY+T G G +P F ++ +++D+ A
Sbjct: 198 YAAMHESARDDIAEGRARNALHHYVTRGEAAGFDPVPEFSERYHLDTYDDIAAAV--EAG 255
Query: 546 LVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEG 602
+ ++G HF +G E R + Y + + N + A H T G++EG
Sbjct: 256 VFRSGYHHFVRYGTLELRRPRADIDLIYYRDTNPRVRNDLAAGAVRDAFAHLRTIGLREG 315
>gi|119486279|ref|ZP_01620338.1| hypothetical protein L8106_16534 [Lyngbya sp. PCC 8106]
gi|119456492|gb|EAW37622.1| hypothetical protein L8106_16534 [Lyngbya sp. PCC 8106]
Length = 507
Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats.
Identities = 54/122 (44%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
FD YL S DL VFG D AA +HY+ G+ E R D F + Y+AS++DLI F
Sbjct: 387 FDPAQYLASNLDLAGVFGFDLAAANQHYLQFGINENRPVDTFDEVRYLASNQDLIGVFGF 446
Query: 543 APDLVQAGKDHFSNFGYEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
P+ +H+ FG EGRS FNP YL + DL FG+D AA QHY+ G E
Sbjct: 447 NPEF---ATEHYVRFGAAEGRSTNSFNPVSYLNNNADLQAFFGNDLDAATQHYVQFGFSE 503
Query: 602 GR 603
GR
Sbjct: 504 GR 505
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 79/190 (41%), Gaps = 9/190 (4%)
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
G D+ +G +T F + S LY + + L+
Sbjct: 326 GGFDIASSPNGSNTAFAVSNSMLYTVDLATGTATNVGMIGDDANL-----NLQGLAVVDP 380
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDL 411
+Y AS DL V G D+ + +H+ +FG++E R + FD YL S DL
Sbjct: 381 LTGDFVFDPAQYLASNLDLAGVFGFDLAAANQHYLQFGINENRPVDTFDEVRYLASNQDL 440
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
VFG + A HY+ G EGR+ ++F + Y+ ++ DL F + D H+
Sbjct: 441 IGVFGFNPEFATEHYVRFGAAEGRSTNSFNPVSYLNNNADLQAFFGNDLD---AATQHYV 497
Query: 472 NFGCEEGRFV 481
FG EGR V
Sbjct: 498 QFGFSEGRIV 507
>gi|307150522|ref|YP_003885906.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
gi|306980750|gb|ADN12631.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
Length = 1012
Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats.
Identities = 62/474 (13%), Positives = 130/474 (27%), Gaps = 35/474 (7%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ ++ T+ S + L + +G L + ++ +N+T+ I
Sbjct: 538 LNDNTNENTEYFTVNLSNPLNGLLIQPVGTATISDTLFSSVSVTLPSGVENLTLTGSNNI 597
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G++GN+++ GNS NN+ G D+ G +G DT+ + ++ +
Sbjct: 598 -NGTGNTGNNILTGNSGNNILNGKEGADILIGDAGNDTYVVD--NAGDQVIETLDQGTDT 654
Query: 329 DANEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+VE L + + + L L G D
Sbjct: 655 VQASIDYTLPENVEILTLTESNNLTGTGNLLNNTLWGNTGNNSLYGAQGNDYINGKAGAD 714
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
EG D + L + + + +
Sbjct: 715 TLTGGEGNDSYVVDNAGDQVIETLNQGTDTVQTSMNYTLPENVEYLILTGTDSVTGTGNV 774
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR----NVFGSDR 503
+ L + G D+ + + + Y+ + G+D+
Sbjct: 775 LNNTLWGNTGNNSLYGAQGNDNLNGKAGADTLTGGEGNDSYVVDNAGDQVIETVAQGTDK 834
Query: 504 GAAARHYITHGVKEGRNPDAFKAL--------EYI---ASHEDLINAFADAPDLVQAGKD 552
A+ YI E L Y+ A + L + G D
Sbjct: 835 VQASIDYILPENVEHLTLTGTDNLSGSGNLVNNYLTGNAGNNTLSGGDGNDTLSGNDGDD 894
Query: 553 HFSN-------FGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
G F + + D + + ++ + + G E
Sbjct: 895 TLIGGNGNDLVTGGNGNDVFLF--ESRIEGIDTIQDFSITNDTIQIRRSGFDG--ELLLG 950
Query: 606 GISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHD 659
++ QF S +D + L+ D G G+ + ++ +
Sbjct: 951 ILNQAQFVLG-----SSAGDSDDRFIYQQSTGKLFFDQDGTGSIAQIQIATLSN 999
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/347 (14%), Positives = 101/347 (29%), Gaps = 16/347 (4%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGE--WSKVVDLTFEETSI-HSDIKFISSN---N 86
D + E + + ++ V LT E++ +++ N
Sbjct: 633 DTYVVDNAGDQVIETLDQGTDTVQASIDYTLPENVEILTLTESNNLTGTGNLLNNTLWGN 692
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+ AD G G + + NA ++ L
Sbjct: 693 TGNNSLYGAQGNDYINGKAGADTLTGGEGNDSYVVDNAGDQVIETLNQGTDTVQTSMNYT 752
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
+ +Y + SV ++ + + G + + GA + G
Sbjct: 753 LPENVEYLILTGTDSVTGTGNVLNNTLWGNTGNNSLYGAQGNDNLNGKAGADTLTGGEGN 812
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG---GVKNYIDLNTESWSSIGGYEKNMTIA 263
V I+T+ G D + ++ ++ L S G N +
Sbjct: 813 DSYVVDNAGDQVIETVAQ--GTDKVQASIDYILPENVEHLTLTGTDNLSGSGNLVNNYLT 870
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA---PSYLYKIYR 320
+ ++ G GND + GN ++ +GND+ G +G D F + + + +
Sbjct: 871 GNAGNNTLSGGDGNDTLSGNDGDDTLIGGNGNDLVTGGNGNDVFLFESRIEGIDTIQDFS 930
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
N I + + L + L A + S Y S
Sbjct: 931 ITNDTIQIRRSGFDGELLLGI--LNQAQFVLGSSAGDSDDRFIYQQS 975
>gi|197103952|ref|YP_002129329.1| hypothetical protein PHZ_c0486 [Phenylobacterium zucineum HLK1]
gi|196477372|gb|ACG76900.1| hypothetical protein PHZ_c0486 [Phenylobacterium zucineum HLK1]
Length = 424
Score = 112 bits (281), Expect = 2e-22, Method: Composition-based stats.
Identities = 62/287 (21%), Positives = 87/287 (30%), Gaps = 45/287 (15%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSY 402
R D + + A + G + H+ G +EGR FD
Sbjct: 155 RGGDPAVSPLTPLFDQAWYLAAHPDV-----GGGRAAPLVHYLTSGSAEGRSPHPLFDEA 209
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPD 461
Y G A HY+ G GR+P F Y+A L
Sbjct: 210 WYRRENAHELAATG---MTALEHYVRRGAALGRSPHPAFDVAHYLAQGPALAP------- 259
Query: 462 LVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEG 518
+ +H+ GC +G FD Y+ S +G HY+T G + G
Sbjct: 260 -DEGPAEHYLREGCAQGLSPHPLFDPAWYM------HRAGSSAQGVPPLVHYLTEGWRSG 312
Query: 519 RNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTS 575
P F Y+A + D+ A HF + G EGR S F+P YL
Sbjct: 313 VPPHPLFDPKWYLAQNPDVAEA-------GLEPLAHFLSGGAAEGRSHSPWFDPAHYLAQ 365
Query: 576 YDDLWNVFGSDRSAAAQHYITHGM---KEGRALGISGMQFKSVMNLS 619
+ A Y+ G E R S + L
Sbjct: 366 RGEALAP----GVAPVVDYLQGGAWQVSEARPGFPSAAYLAARPGLV 408
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/230 (18%), Positives = 70/230 (30%), Gaps = 38/230 (16%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI- 397
+ +E + + Y A L G +H+ G ++G
Sbjct: 225 TALEHYVRRGAALGRSPHPAFDVAHYLAQGPALAPDEGP-----AEHYLREGCAQGLSPH 279
Query: 398 -TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD Y+ + HY+T G + G P F Y+A + D+ A
Sbjct: 280 PLFDPAWYMHR-----AGSSAQGVPPLVHYLTEGWRSGVPPHPLFDPKWYLAQNPDVAEA 334
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
+ HF + G EGR + FD YL + A Y+
Sbjct: 335 GLEP-------LAHFLSGGAAEGRSHSPWFDPAHYLAQRGEALAPG----VAPVVDYLQG 383
Query: 514 GV---KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
G E R F + Y+A+ L+ +H++ G
Sbjct: 384 GAWQVSEARP--GFPSAAYLAARPGLVRE-------GVTPLEHWARLGGR 424
>gi|86356373|ref|YP_468265.1| metallopeptidase protein [Rhizobium etli CFN 42]
gi|86280475|gb|ABC89538.1| probable metallopeptidase protein [Rhizobium etli CFN 42]
Length = 329
Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/289 (17%), Positives = 88/289 (30%), Gaps = 50/289 (17%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLS---------FDITELNPNAQEVARWAL 59
T ++ D L W + I Y ++ + + ++ Q +A + +
Sbjct: 14 TRDQKVDGLFSGTAW-DGTITYAFPTTSSSYADGAELYYEKYYSFSPISSQQQSLALYFM 72
Query: 60 -GEWSKVVDLTFEETSIHSDIKFISS-----------------NNGYVCTPRY---DSRY 98
+ + F ++ F + + P
Sbjct: 73 EQSYGSAANDGFS-VEGFTNANFEAGSANTATVRFAQTSDPLLDTAGAYFPATDGRGGDI 131
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
+ + + G HE+GHALGL H G V D +
Sbjct: 132 WFGTGYAGTEADYRFPRFGNYAGQTLAHELGHALGLKHAHE---GGTVVPSAYDSLEYTI 188
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQK--- 214
+T + G T M+ DI A+Q++YGA + G+ +Y+ Q
Sbjct: 189 MTYHTFIGDDESGAKYEQNGAPQTFMMLDIAALQEMYGADYTTNSGDTVYRWNPNQGITY 248
Query: 215 ----------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+ TI+D GG D DL+ IDL+ +S
Sbjct: 249 VNGVAAITPAANRVFATIWDGGGTDTYDLSAYTTALK-IDLHAGGYSVF 296
>gi|193076786|gb|ABO11503.2| Hemolysin-type calcium-binding region [Acinetobacter baumannii ATCC
17978]
Length = 3298
Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats.
Identities = 71/422 (16%), Positives = 133/422 (31%), Gaps = 94/422 (22%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKFISSNNGYVCTPRYDSRYFMEINFDK 106
P AL ++++++++ F ++ D+KF + +
Sbjct: 1374 TPEQVIAVGKALNKFAEILNIQFVQSEMGSGDLKFYLDDLSSADASAAAGYASAQTGEIH 1433
Query: 107 ADVWRY----GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
+ + +G+G+ LHEI HALGL HP ++ ++
Sbjct: 1434 LNSLIFEVSSDLGEGSNGFEVLLHEISHALGLKHPFE--------APVLPELENNQNNTL 1485
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT 221
MSY + + + D+ ++Q ++G + +GN+ Y +
Sbjct: 1486 MSYTSNGVNDTN--------LKLYDLASLQYLHGVNQNVHVGNDTYTFADKY-------- 1529
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE------KNMTIAQHTVIESVVGSS 275
I+D G D + + YIDLN WS IG I TVIE+ +G
Sbjct: 1530 IWDGNGIDTFNAFTLTQNV-YIDLNAGGWSYIGQKSQSILDEGQTFIGYGTVIENAIGGI 1588
Query: 276 GNDVVIGNSANNVFFESSGNDVF--DGSSGLD----------TFFYYAPSYLYKIYRFEN 323
G+D +I N+ANN+ +G D + +G+ G D + E+
Sbjct: 1589 GDDTLISNAANNLLQGGAGKDTYIFNGNFGHDQIIDVDHNNKIIILNNGFDNLNLVLAED 1648
Query: 324 AIIVYDANE--------------HKQDFLSDVERLRF----------------------- 346
I++ ++N + +L + F
Sbjct: 1649 TILLLNSNSSIQLDINQFESIIINGITYLKNDFIANFGGYISVNHDYFLESNQNNVVILG 1708
Query: 347 --------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
D + + + + L G D G D+
Sbjct: 1709 TGDFHIVGNDLDNKIIGNSGNNTISAGDGNDTLQGGFGNDEINGGTGDDTLIGGLGNDVL 1768
Query: 399 FD 400
+
Sbjct: 1769 YG 1770
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 72/261 (27%), Gaps = 3/261 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G T+ + +++ G +GNDV+ G S N+ +GND G G D F
Sbjct: 2957 TVNGTSSIDTLYGASGNDTITGLAGNDVLYGQSGNDTLNGGTGNDTMYGGKGDDIFVID- 3015
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYED 370
S + N I + ++VE L I+ + L ++
Sbjct: 3016 -SSTDIVNENVNEGIDTVQSSITYSLGNNVENLTLTGTTAINGTGNALNNTLLGNSAINT 3074
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L G D + + G D+ ++ + R + +
Sbjct: 3075 LTDGAGDDYLDGGAGNDKLLGGLGNDVYVVDSTTDTITENTNEGIDTVRSSVTYTLGNNL 3134
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
A + LI G D G + S +
Sbjct: 3135 ENLTLTGTTAINATGNALNNTLIGNNEVNILNGGAGNDILDGQGGNDQFTGGTGSDTLIY 3194
Query: 491 SYDDLRNVFGSDRGAAARHYI 511
G + + +
Sbjct: 3195 QLLIASEATGGNGTDSWSDFT 3215
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 63/220 (28%), Gaps = 14/220 (6%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
I G+D + GG + E + G + + + +VG
Sbjct: 416 GSEDNNIDIQGGDGNDHI----YGGGGDDEIYGGEGDDYLEGGHGSDELHGGNDNDKLVG 471
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G++ + G+ N++ + D G SG D + S + I+
Sbjct: 472 MDGDNYLYGDDGNDLLLGGADKDELYGGSGND--YLNGGSGADLLDGGTGNDILVGGPNW 529
Query: 334 KQDFLSDVERLRFAD--------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ + FAD + + I + ++ G D+ S
Sbjct: 530 LIAEGGEGNDIIFADPNKVSNLERVDELSGGAGNDIFYGSIGPSNIKGAEGNDIIYSANG 589
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+G DI + + +RN G +
Sbjct: 590 QDIITGGDGNDIIYGYSGEDTTESTIRNNLSGGTGNDLIY 629
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 50/388 (12%), Positives = 110/388 (28%), Gaps = 38/388 (9%)
Query: 203 GNNIYKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGG 255
+ IY + + ++ +D L D L G N + L + G
Sbjct: 439 DDEIYGGEGDDYLEGGHGSDELHGGNDNDKLVGMDGDNYLYGDDGNDLLLGGADKDELYG 498
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD---------------- 299
N + + + + G +GND+++G + GND+
Sbjct: 499 GSGNDYLNGGSGADLLDGGTGNDILVGGPNWLIAEGGEGNDIIFADPNKVSNLERVDELS 558
Query: 300 GSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
G +G D F+ IY I+ + + + E + +
Sbjct: 559 GGAGNDIFYGSIGPSNIKGAEGNDIIYSANGQDIITGGDGNDIIYGYSGEDTTESTIRNN 618
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
++ + + + + +G ++ E + + ++E + + + ++
Sbjct: 619 LSGGTGNDLIYGSVNSDFIEGGVGTNILEGKESVDNYIITENEGLGLGTQYIIDQDGRIQ 678
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL------VQVG 466
+ I K E I+ D + + G
Sbjct: 679 INLATLAVGTYDENIRAWYSSNNLYIIRKLGEGTDKEIISIHKIGDEKNTIYIEGWGKNG 738
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI--THGVKEGRNPDAF 524
+FD+ L + +++ S GA+ Y+ T G +
Sbjct: 739 DFGLVFSEITPTNLPSFDNLSTLNNGNNIAYNQTSVNGASGNDYLSGTTGNDIIDGANGN 798
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKD 552
+ + + L L GKD
Sbjct: 799 NFINGLDGDDTLKGGDNQDIILGGVGKD 826
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/353 (13%), Positives = 95/353 (26%), Gaps = 51/353 (14%)
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP---GSYNGGYPVYGVDNDYENDS 157
+ AD G+G IL ++ + H G + Y G D Y
Sbjct: 942 DGGALGADTVYGGLGDDFILGSGSVDNLYGDENSDHLYGRGGDDYLYGGTGKDVVYGGAG 1001
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDI-VAVQKIYGAPKG-SLGNNIYKIEVQQKD 215
+ + +I + ++G + ++
Sbjct: 1002 RDYISGGDDDDKLIGGYEADVIYGGEGNDNITGDLLNLFGTTAPPTSADSTRYGNDLIFG 1061
Query: 216 SPFIQTIYDSGGDDLL---------------DLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
I+ +GGDD++ D ID++ + + G + +
Sbjct: 1062 GKGEYQIWSNGGDDIIFGGTDKDYIDGGEGNDYLYGDNEDQLIDIDGKEKDDVFGGKGDD 1121
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + + G ND++ G + +++ GND+ G G D F +
Sbjct: 1122 FLFGGAGNDQLYGGKDNDILYGGANDDLIKGEDGNDIIYGGDGNDIFLFGG--------- 1172
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD-- 378
+ L D I+ ++L G D
Sbjct: 1173 ------------------EGNDILYGEDANDKIHGDSGDDIIFGGTGNDNLQGGQGSDLY 1214
Query: 379 VFESMKHFYEF--GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
VF +S+ + + +++Y D D Y +
Sbjct: 1215 VFSIGDGTDTIVEEVSDIASLNYQNFIYFTFNSDQIRGVIRDGYDLIIKYDQY 1267
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/325 (13%), Positives = 88/325 (27%), Gaps = 33/325 (10%)
Query: 57 WALGEWSKVVDLTFE----ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY 112
A S + LTF + S I T + + D
Sbjct: 2938 TANQTVSDIFKLTFVVQNLTVNGTSSID-TLYGASGNDTITGLAGNDVLYGQSGNDTLNG 2996
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G G T+ + + + + D+ +S+
Sbjct: 2997 GTGNDTMYGGKGDDI----------FVIDSSTDIVNENVNEGIDTVQSSITYSLGNNVEN 3046
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD--- 229
+ + T + A+ + + G+D
Sbjct: 3047 LTLTG---TTAINGTGNALNNTLLGNSAINTLTDGAGDDYLDGGAGNDKLLGGLGNDVYV 3103
Query: 230 ---LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + + + ++G +N+T+ T I + G++ N+ +IGN+
Sbjct: 3104 VDSTTDTITENTNEGIDTVRSSVTYTLGNNLENLTLTGTTAI-NATGNALNNTLIGNNEV 3162
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSY--------LYKIYRFENAIIVYDANEHKQDFL 338
N+ +GND+ DG G D F S + D
Sbjct: 3163 NILNGGAGNDILDGQGGNDQFTGGTGSDTLIYQLLIASEATGGNGTDSWSDFTVGNVSTN 3222
Query: 339 SDVERLRFADQCIDSVNVKQRSILE 363
+ +++ F D I+ S L+
Sbjct: 3223 MNADKIDFGDLLINFTGNYNTSSLD 3247
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 83/296 (28%), Gaps = 25/296 (8%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL---IGGVKNYIDLNTESWSSIGGYEKNMT 261
+Y + Y G+D + + G + + + + G ++T
Sbjct: 2348 TVYGGNGNDSITLKSGDAYGGEGNDAIAINNGIAYGENGDDLIIIQAGDAYGGDGNDSIT 2407
Query: 262 I-----AQHTVIESV------VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
I + + G G+D +I N+ + G D+ G SG DT+
Sbjct: 2408 ILTDASYGGDGNDVLMGSGQFYGGKGDDTLIANNDSAYMNGGEGADILQGGSGNDTYIVD 2467
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSD-----VERLRFADQCIDSVNVKQRSILEYT 365
L + + L++ +E F+D + + + L
Sbjct: 2468 ELDILQLENETGGYDTIVYQYDVGNIDLANSQFEAIELFGFSDSYL--LGNTANNSLIGN 2525
Query: 366 ASYEDLIQVIGQDVFESMKHFYEF----GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ L G D + + D ++ + G G+D
Sbjct: 2526 SGNNYLDGRTGSDYMAGGAGDDYYVVDVTDTIITDEDGNTRIIDGDQVAEDFDAGTDTIE 2585
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ G E NP + + + + A G D+ ++
Sbjct: 2586 LWQDARFIGQDENGNPVLTNNYRLLEDNIENLVLKGSAKTAFGNGLDNIITSNAQD 2641
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 48/139 (34%), Gaps = 12/139 (8%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIG--------GYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D L N + L T + +G G N TI+ +++ G GND + G
Sbjct: 1694 DYFLESNQNNVVILGTGDFHIVGNDLDNKIIGNSGNNTISAGDGNDTLQGGFGNDEINGG 1753
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ ++ GNDV G G D + + I + +Y + +
Sbjct: 1754 TGDDTLIGGLGNDVLYGGLGNDQYIFKDNDGDDVIVDSDGLNKIYLN----HSLSNQISL 1809
Query: 344 LRFADQCIDSVNVKQRSIL 362
+D + + +IL
Sbjct: 1810 HVISDGDLTITYGENSNIL 1828
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 38/319 (11%), Positives = 69/319 (21%), Gaps = 12/319 (3%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + A + L G D +G DI
Sbjct: 2958 VNGTSSIDTLYGASGNDTITGLAGNDVLYGQSGNDTLNGGTGNDTMYGGKGDDIFVIDSS 3017
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
+++ + + + + A + L+ A
Sbjct: 3018 TDIVNENVNEGIDTVQSSITYSLGNNVENLTLTGTTAINGTGNALNNTLLGNSAINTLTD 3077
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYL-GSYDDLRNVF---GSDRGAAARHYITHGVKEGR 519
G D+ + + +Y+ S D G D ++ Y E
Sbjct: 3078 GAGDDYLDGGAGNDKLLGGLGNDVYVVDSTTDTITENTNEGIDTVRSSVTYTLGNNLENL 3137
Query: 520 NPDAFKALE--YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD 577
A+ A + LI AG D G T Y
Sbjct: 3138 TLTGTTAINATGNALNNTLIGNNEVNILNGGAGND--ILDGQGGNDQFTGGTGSDTLIYQ 3195
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM----NLSEKSRDKADLSLSFD 633
L + + + + F ++ S +
Sbjct: 3196 LLIASEATGGNGTDSWSDFTVGNVSTNMNADKIDFGDLLINFTGNYNTSSLDPYIKTLLS 3255
Query: 634 HKKVDLYTDYFGDGNYYDS 652
+Y D G G Y+S
Sbjct: 3256 GSNTQIYIDRDGSGASYNS 3274
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 49/350 (14%), Positives = 90/350 (25%), Gaps = 13/350 (3%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
L+ + G N I + G G+D + G ++
Sbjct: 760 TLNNGNNIAYNQTSVNGASGNDYLSGTTGNDIIDGANGNNFINGLDGDDTLKGGDNQDII 819
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G D G G D + + Y+ + L+D+ L D
Sbjct: 820 LGGVGKDKIYGGDGEDLLISSGKDTIVASSFATYLLEKYNNQVNPNATLADLTNLITNDA 879
Query: 350 CID-SVNVKQRSIL-EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+N E T SY G + F + S L
Sbjct: 880 SSHWDINFNFTKQWSEETQSYTYFFTENGVITPFLLPGINIFSDIASNTLNLTSIYSLLE 939
Query: 408 YDDLRNVFGSD--RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
DD + G + G + D Y +D + +
Sbjct: 940 TDDGGALGADTVYGGLGDDFILGSGSVDNLYGDENSDHLYGRGGDDYLYGGTGKDVVYGG 999
Query: 466 GKDHFSNFGCEEGRFVT---FDSYLYLGSY----DDLRNVFGSDRGAAARHYITHGVKEG 518
+ + G ++ + + D DL N+FG+ + +G
Sbjct: 1000 AGRDYISGGDDDDKLIGGYEADVIYGGEGNDNITGDLLNLFGTTAPPTSADSTRYGNDLI 1059
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
+ ++ D I D + G+ + +G E + I +
Sbjct: 1060 FGGKG--EYQIWSNGGDDIIFGGTDKDYIDGGEGNDYLYGDNEDQLIDID 1107
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 58/486 (11%), Positives = 121/486 (24%), Gaps = 53/486 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKAD---VWRYGIGKGTILSHNALHEIGHAL 132
+ D + S P +D+ + + A G + I A
Sbjct: 737 NGDFGLVFSEITPTNLPSFDNLSTLNNGNNIAYNQTSVNGASGNDYLSGTTGNDIIDGAN 796
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G +G + G DN + Y + ++ +S
Sbjct: 797 GNNFINGLDGDDTLKGGDNQDIILGGVGKDKIYGGDGEDLLISSGKDTIVASSF----AT 852
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ + N ++ + + +D + + Y +
Sbjct: 853 YLLEKYNNQVNPNATLADLTNLITNDASSHWDINFNFTKQWSEETQSYTYFFTENGVITP 912
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ I ++ +S ++ + + G D G G D F
Sbjct: 913 F--LLPGINIFSDIASNTLNLTSIYSLLETDDG-----GALGADTVYGGLGDD--FILGS 963
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +Y EN+ +Y + ++ A + +
Sbjct: 964 GSVDNLYGDENSDHLYGRGGDDY-----------------LYGGTGKDVVYGGAGRDYIS 1006
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
D EG D DL N+FG+ + +G
Sbjct: 1007 GGDDDDKLIGGYEADVIYGGEGNDNITG---------DLLNLFGTTAPPTSADSTRYGN- 1056
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ + + +D+I D + + + +G E + + D
Sbjct: 1057 DLIFGGKGEYQIWSNGGDDIIFGGTDKDYIDGGEGNDYL-YGDNEDQLIDID----GKEK 1111
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
DD+ G D + G + L A+ + + + G D
Sbjct: 1112 DDVFGGKGDDFL-----FGGAGNDQLYGGKDNDILYGGANDDLIKGEDGNDIIYGGDGND 1166
Query: 553 HFSNFG 558
F G
Sbjct: 1167 IFLFGG 1172
Score = 41.7 bits (96), Expect = 0.43, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 33/101 (32%), Gaps = 3/101 (2%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI ++++ + V G ++ +G ++ G SG D + Y ++
Sbjct: 2101 TIYAKGGNDNIITGNKGSVTYGGDGDDNISGGTGKNIIFGDSGNDNIYNYGEGS---LFG 2157
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ + + D + + ++ N K
Sbjct: 2158 GDGDDRLSGGDRSYLDGGNGYDIYNISEDSNVHGNYKITDA 2198
>gi|124021808|ref|YP_001016115.1| hypothetical protein P9303_00951 [Prochlorococcus marinus str. MIT
9303]
gi|123962094|gb|ABM76850.1| Hypothetical protein P9303_00951 [Prochlorococcus marinus str. MIT
9303]
Length = 373
Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats.
Identities = 61/325 (18%), Positives = 112/325 (34%), Gaps = 20/325 (6%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
+T ++ D Y + + ++ + Q+ + + + +
Sbjct: 16 SFTRGQLNRDGFIDIYLHTPGGAVSVGGGSVSSQTISSLPISASDQQFFQDIVLSLDQRL 75
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGI------GKGTIL 120
D F TS + + M N D W I L
Sbjct: 76 DAEFRFTSDKEVSDIQLYYDSEINLGGDILGLAMANNEAGRDWWELFINKPAFGADLNHL 135
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
++ +HE+GHALGL HP G V G+ + + + +VM+Y P +
Sbjct: 136 RYSLIHELGHALGLEHPFDNTDGDVVDGITDPWTSAYPEDTVMAYRSPS------KGSWP 189
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
V+D+ A+ I+GA N Q + + I +GGDD L G
Sbjct: 190 NAYTVNDLEALVSIWGAETQVFSNQ----SEQIFGEDYSEVIIAAGGDDAL----FGAGG 241
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N L + + G + + + + G GND++ G ++ G+D++ G
Sbjct: 242 NDDLLGGIGFDLVRGGPGDDVVRGGKNADQLYGGRGNDLLRGGRGHDQLKGGVGDDLYWG 301
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAI 325
G D F + + + + +A
Sbjct: 302 GPGADLFRFSSGNDSVFDFNIADAD 326
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 38/139 (27%), Gaps = 28/139 (20%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + G ++V+I ++ F + GND G G D
Sbjct: 216 EQIFGEDYSEVIIAAGGDDALFGAGGNDDLLGGIGFDLVR-------------GGPGDDV 262
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D L + +L ++ L +G D++
Sbjct: 263 VRGGKNADQL---------------YGGRGNDLLRGGRGHDQLKGGVGDDLYWGGPGADL 307
Query: 389 FGLSEGRDITFDSYLYLGS 407
F S G D FD +
Sbjct: 308 FRFSSGNDSVFDFNIADAD 326
>gi|126641121|ref|YP_001084105.1| hemolysin-type calcium-binding region [Acinetobacter baumannii ATCC
17978]
Length = 3216
Score = 111 bits (276), Expect = 5e-22, Method: Composition-based stats.
Identities = 71/422 (16%), Positives = 133/422 (31%), Gaps = 94/422 (22%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKFISSNNGYVCTPRYDSRYFMEINFDK 106
P AL ++++++++ F ++ D+KF + +
Sbjct: 1292 TPEQVIAVGKALNKFAEILNIQFVQSEMGSGDLKFYLDDLSSADASAAAGYASAQTGEIH 1351
Query: 107 ADVWRY----GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
+ + +G+G+ LHEI HALGL HP ++ ++
Sbjct: 1352 LNSLIFEVSSDLGEGSNGFEVLLHEISHALGLKHPFE--------APVLPELENNQNNTL 1403
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT 221
MSY + + + D+ ++Q ++G + +GN+ Y +
Sbjct: 1404 MSYTSNGVNDTN--------LKLYDLASLQYLHGVNQNVHVGNDTYTFADKY-------- 1447
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE------KNMTIAQHTVIESVVGSS 275
I+D G D + + YIDLN WS IG I TVIE+ +G
Sbjct: 1448 IWDGNGIDTFNAFTLTQNV-YIDLNAGGWSYIGQKSQSILDEGQTFIGYGTVIENAIGGI 1506
Query: 276 GNDVVIGNSANNVFFESSGNDVF--DGSSGLD----------TFFYYAPSYLYKIYRFEN 323
G+D +I N+ANN+ +G D + +G+ G D + E+
Sbjct: 1507 GDDTLISNAANNLLQGGAGKDTYIFNGNFGHDQIIDVDHNNKIIILNNGFDNLNLVLAED 1566
Query: 324 AIIVYDANE--------------HKQDFLSDVERLRF----------------------- 346
I++ ++N + +L + F
Sbjct: 1567 TILLLNSNSSIQLDINQFESIIINGITYLKNDFIANFGGYISVNHDYFLESNQNNVVILG 1626
Query: 347 --------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
D + + + + L G D G D+
Sbjct: 1627 TGDFHIVGNDLDNKIIGNSGNNTISAGDGNDTLQGGFGNDEINGGTGDDTLIGGLGNDVL 1686
Query: 399 FD 400
+
Sbjct: 1687 YG 1688
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 72/261 (27%), Gaps = 3/261 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G T+ + +++ G +GNDV+ G S N+ +GND G G D F
Sbjct: 2875 TVNGTSSIDTLYGASGNDTITGLAGNDVLYGQSGNDTLNGGTGNDTMYGGKGDDIFVID- 2933
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYED 370
S + N I + ++VE L I+ + L ++
Sbjct: 2934 -SSTDIVNENVNEGIDTVQSSITYSLGNNVENLTLTGTTAINGTGNALNNTLLGNSAINT 2992
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L G D + + G D+ ++ + R + +
Sbjct: 2993 LTDGAGDDYLDGGAGNDKLLGGLGNDVYVVDSTTDTITENTNEGIDTVRSSVTYTLGNNL 3052
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
A + LI G D G + S +
Sbjct: 3053 ENLTLTGTTAINATGNALNNTLIGNNEVNILNGGAGNDILDGQGGNDQFTGGTGSDTLIY 3112
Query: 491 SYDDLRNVFGSDRGAAARHYI 511
G + + +
Sbjct: 3113 QLLIASEATGGNGTDSWSDFT 3133
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 63/220 (28%), Gaps = 14/220 (6%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
I G+D + GG + E + G + + + +VG
Sbjct: 334 GSEDNNIDIQGGDGNDHI----YGGGGDDEIYGGEGDDYLEGGHGSDELHGGNDNDKLVG 389
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G++ + G+ N++ + D G SG D + S + I+
Sbjct: 390 MDGDNYLYGDDGNDLLLGGADKDELYGGSGND--YLNGGSGADLLDGGTGNDILVGGPNW 447
Query: 334 KQDFLSDVERLRFAD--------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ + FAD + + I + ++ G D+ S
Sbjct: 448 LIAEGGEGNDIIFADPNKVSNLERVDELSGGAGNDIFYGSIGPSNIKGAEGNDIIYSANG 507
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+G DI + + +RN G +
Sbjct: 508 QDIITGGDGNDIIYGYSGEDTTESTIRNNLSGGTGNDLIY 547
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/388 (12%), Positives = 110/388 (28%), Gaps = 38/388 (9%)
Query: 203 GNNIYKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGG 255
+ IY + + ++ +D L D L G N + L + G
Sbjct: 357 DDEIYGGEGDDYLEGGHGSDELHGGNDNDKLVGMDGDNYLYGDDGNDLLLGGADKDELYG 416
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD---------------- 299
N + + + + G +GND+++G + GND+
Sbjct: 417 GSGNDYLNGGSGADLLDGGTGNDILVGGPNWLIAEGGEGNDIIFADPNKVSNLERVDELS 476
Query: 300 GSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
G +G D F+ IY I+ + + + E + +
Sbjct: 477 GGAGNDIFYGSIGPSNIKGAEGNDIIYSANGQDIITGGDGNDIIYGYSGEDTTESTIRNN 536
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
++ + + + + +G ++ E + + ++E + + + ++
Sbjct: 537 LSGGTGNDLIYGSVNSDFIEGGVGTNILEGKESVDNYIITENEGLGLGTQYIIDQDGRIQ 596
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL------VQVG 466
+ I K E I+ D + + G
Sbjct: 597 INLATLAVGTYDENIRAWYSSNNLYIIRKLGEGTDKEIISIHKIGDEKNTIYIEGWGKNG 656
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI--THGVKEGRNPDAF 524
+FD+ L + +++ S GA+ Y+ T G +
Sbjct: 657 DFGLVFSEITPTNLPSFDNLSTLNNGNNIAYNQTSVNGASGNDYLSGTTGNDIIDGANGN 716
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKD 552
+ + + L L GKD
Sbjct: 717 NFINGLDGDDTLKGGDNQDIILGGVGKD 744
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/353 (13%), Positives = 95/353 (26%), Gaps = 51/353 (14%)
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP---GSYNGGYPVYGVDNDYENDS 157
+ AD G+G IL ++ + H G + Y G D Y
Sbjct: 860 DGGALGADTVYGGLGDDFILGSGSVDNLYGDENSDHLYGRGGDDYLYGGTGKDVVYGGAG 919
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDI-VAVQKIYGAPKG-SLGNNIYKIEVQQKD 215
+ + +I + ++G + ++
Sbjct: 920 RDYISGGDDDDKLIGGYEADVIYGGEGNDNITGDLLNLFGTTAPPTSADSTRYGNDLIFG 979
Query: 216 SPFIQTIYDSGGDDLL---------------DLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
I+ +GGDD++ D ID++ + + G + +
Sbjct: 980 GKGEYQIWSNGGDDIIFGGTDKDYIDGGEGNDYLYGDNEDQLIDIDGKEKDDVFGGKGDD 1039
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + + G ND++ G + +++ GND+ G G D F +
Sbjct: 1040 FLFGGAGNDQLYGGKDNDILYGGANDDLIKGEDGNDIIYGGDGNDIFLFGG--------- 1090
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD-- 378
+ L D I+ ++L G D
Sbjct: 1091 ------------------EGNDILYGEDANDKIHGDSGDDIIFGGTGNDNLQGGQGSDLY 1132
Query: 379 VFESMKHFYEF--GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
VF +S+ + + +++Y D D Y +
Sbjct: 1133 VFSIGDGTDTIVEEVSDIASLNYQNFIYFTFNSDQIRGVIRDGYDLIIKYDQY 1185
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/355 (13%), Positives = 96/355 (27%), Gaps = 28/355 (7%)
Query: 57 WALGEWSKVVDLTFE----ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY 112
A S + LTF + S I T + + D
Sbjct: 2856 TANQTVSDIFKLTFVVQNLTVNGTSSID-TLYGASGNDTITGLAGNDVLYGQSGNDTLNG 2914
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G G T+ + + + + D+ +S+
Sbjct: 2915 GTGNDTMYGGKGDDI----------FVIDSSTDIVNENVNEGIDTVQSSITYSLGNNVEN 2964
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD--- 229
+ + T + A+ + + G+D
Sbjct: 2965 LTLTG---TTAINGTGNALNNTLLGNSAINTLTDGAGDDYLDGGAGNDKLLGGLGNDVYV 3021
Query: 230 ---LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + + + ++G +N+T+ T I + G++ N+ +IGN+
Sbjct: 3022 VDSTTDTITENTNEGIDTVRSSVTYTLGNNLENLTLTGTTAI-NATGNALNNTLIGNNEV 3080
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
N+ +GND+ DG G D F S + + D SD
Sbjct: 3081 NILNGGAGNDILDGQGGNDQFTGGTGSDTLIYQLLIASEA---TGGNGTDSWSDFTVGNV 3137
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ ++ +T +Y S + + +G +++S
Sbjct: 3138 STNMNADKIDFGDLLINFTGNYNTSSLDPYIKTLLSGSNTQIYIDRDGSGASYNS 3192
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 83/296 (28%), Gaps = 25/296 (8%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL---IGGVKNYIDLNTESWSSIGGYEKNMT 261
+Y + Y G+D + + G + + + + G ++T
Sbjct: 2266 TVYGGNGNDSITLKSGDAYGGEGNDAIAINNGIAYGENGDDLIIIQAGDAYGGDGNDSIT 2325
Query: 262 I-----AQHTVIESV------VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
I + + G G+D +I N+ + G D+ G SG DT+
Sbjct: 2326 ILTDASYGGDGNDVLMGSGQFYGGKGDDTLIANNDSAYMNGGEGADILQGGSGNDTYIVD 2385
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSD-----VERLRFADQCIDSVNVKQRSILEYT 365
L + + L++ +E F+D + + + L
Sbjct: 2386 ELDILQLENETGGYDTIVYQYDVGNIDLANSQFEAIELFGFSDSYL--LGNTANNSLIGN 2443
Query: 366 ASYEDLIQVIGQDVFESMKHFYEF----GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ L G D + + D ++ + G G+D
Sbjct: 2444 SGNNYLDGRTGSDYMAGGAGDDYYVVDVTDTIITDEDGNTRIIDGDQVAEDFDAGTDTIE 2503
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ G E NP + + + + A G D+ ++
Sbjct: 2504 LWQDARFIGQDENGNPVLTNNYRLLEDNIENLVLKGSAKTAFGNGLDNIITSNAQD 2559
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 48/139 (34%), Gaps = 12/139 (8%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIG--------GYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D L N + L T + +G G N TI+ +++ G GND + G
Sbjct: 1612 DYFLESNQNNVVILGTGDFHIVGNDLDNKIIGNSGNNTISAGDGNDTLQGGFGNDEINGG 1671
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ ++ GNDV G G D + + I + +Y + +
Sbjct: 1672 TGDDTLIGGLGNDVLYGGLGNDQYIFKDNDGDDVIVDSDGLNKIYLN----HSLSNQISL 1727
Query: 344 LRFADQCIDSVNVKQRSIL 362
+D + + +IL
Sbjct: 1728 HVISDGDLTITYGENSNIL 1746
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 38/319 (11%), Positives = 69/319 (21%), Gaps = 12/319 (3%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + A + L G D +G DI
Sbjct: 2876 VNGTSSIDTLYGASGNDTITGLAGNDVLYGQSGNDTLNGGTGNDTMYGGKGDDIFVIDSS 2935
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
+++ + + + + A + L+ A
Sbjct: 2936 TDIVNENVNEGIDTVQSSITYSLGNNVENLTLTGTTAINGTGNALNNTLLGNSAINTLTD 2995
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYL-GSYDDLRNVF---GSDRGAAARHYITHGVKEGR 519
G D+ + + +Y+ S D G D ++ Y E
Sbjct: 2996 GAGDDYLDGGAGNDKLLGGLGNDVYVVDSTTDTITENTNEGIDTVRSSVTYTLGNNLENL 3055
Query: 520 NPDAFKALE--YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD 577
A+ A + LI AG D G T Y
Sbjct: 3056 TLTGTTAINATGNALNNTLIGNNEVNILNGGAGND--ILDGQGGNDQFTGGTGSDTLIYQ 3113
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM----NLSEKSRDKADLSLSFD 633
L + + + + F ++ S +
Sbjct: 3114 LLIASEATGGNGTDSWSDFTVGNVSTNMNADKIDFGDLLINFTGNYNTSSLDPYIKTLLS 3173
Query: 634 HKKVDLYTDYFGDGNYYDS 652
+Y D G G Y+S
Sbjct: 3174 GSNTQIYIDRDGSGASYNS 3192
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 49/350 (14%), Positives = 90/350 (25%), Gaps = 13/350 (3%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
L+ + G N I + G G+D + G ++
Sbjct: 678 TLNNGNNIAYNQTSVNGASGNDYLSGTTGNDIIDGANGNNFINGLDGDDTLKGGDNQDII 737
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G D G G D + + Y+ + L+D+ L D
Sbjct: 738 LGGVGKDKIYGGDGEDLLISSGKDTIVASSFATYLLEKYNNQVNPNATLADLTNLITNDA 797
Query: 350 CID-SVNVKQRSIL-EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+N E T SY G + F + S L
Sbjct: 798 SSHWDINFNFTKQWSEETQSYTYFFTENGVITPFLLPGINIFSDIASNTLNLTSIYSLLE 857
Query: 408 YDDLRNVFGSD--RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
DD + G + G + D Y +D + +
Sbjct: 858 TDDGGALGADTVYGGLGDDFILGSGSVDNLYGDENSDHLYGRGGDDYLYGGTGKDVVYGG 917
Query: 466 GKDHFSNFGCEEGRFVT---FDSYLYLGSY----DDLRNVFGSDRGAAARHYITHGVKEG 518
+ + G ++ + + D DL N+FG+ + +G
Sbjct: 918 AGRDYISGGDDDDKLIGGYEADVIYGGEGNDNITGDLLNLFGTTAPPTSADSTRYGNDLI 977
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
+ ++ D I D + G+ + +G E + I +
Sbjct: 978 FGGKG--EYQIWSNGGDDIIFGGTDKDYIDGGEGNDYLYGDNEDQLIDID 1025
Score = 42.9 bits (99), Expect = 0.16, Method: Composition-based stats.
Identities = 58/486 (11%), Positives = 121/486 (24%), Gaps = 53/486 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKAD---VWRYGIGKGTILSHNALHEIGHAL 132
+ D + S P +D+ + + A G + I A
Sbjct: 655 NGDFGLVFSEITPTNLPSFDNLSTLNNGNNIAYNQTSVNGASGNDYLSGTTGNDIIDGAN 714
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G +G + G DN + Y + ++ +S
Sbjct: 715 GNNFINGLDGDDTLKGGDNQDIILGGVGKDKIYGGDGEDLLISSGKDTIVASSF----AT 770
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ + N ++ + + +D + + Y +
Sbjct: 771 YLLEKYNNQVNPNATLADLTNLITNDASSHWDINFNFTKQWSEETQSYTYFFTENGVITP 830
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ I ++ +S ++ + + G D G G D F
Sbjct: 831 F--LLPGINIFSDIASNTLNLTSIYSLLETDDG-----GALGADTVYGGLGDD--FILGS 881
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +Y EN+ +Y + ++ A + +
Sbjct: 882 GSVDNLYGDENSDHLYGRGGDDY-----------------LYGGTGKDVVYGGAGRDYIS 924
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
D EG D DL N+FG+ + +G
Sbjct: 925 GGDDDDKLIGGYEADVIYGGEGNDNITG---------DLLNLFGTTAPPTSADSTRYGN- 974
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ + + +D+I D + + + +G E + + D
Sbjct: 975 DLIFGGKGEYQIWSNGGDDIIFGGTDKDYIDGGEGNDYL-YGDNEDQLIDID----GKEK 1029
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
DD+ G D + G + L A+ + + + G D
Sbjct: 1030 DDVFGGKGDDFL-----FGGAGNDQLYGGKDNDILYGGANDDLIKGEDGNDIIYGGDGND 1084
Query: 553 HFSNFG 558
F G
Sbjct: 1085 IFLFGG 1090
Score = 41.3 bits (95), Expect = 0.50, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 33/101 (32%), Gaps = 3/101 (2%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI ++++ + V G ++ +G ++ G SG D + Y ++
Sbjct: 2019 TIYAKGGNDNIITGNKGSVTYGGDGDDNISGGTGKNIIFGDSGNDNIYNYGEGS---LFG 2075
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ + + D + + ++ N K
Sbjct: 2076 GDGDDRLSGGDRSYLDGGNGYDIYNISEDSNVHGNYKITDA 2116
>gi|316935446|ref|YP_004110428.1| 5'-nucleotidase domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315603160|gb|ADU45695.1| 5'-Nucleotidase domain protein [Rhodopseudomonas palustris DX-1]
Length = 2775
Score = 111 bits (276), Expect = 6e-22, Method: Composition-based stats.
Identities = 52/370 (14%), Positives = 94/370 (25%), Gaps = 35/370 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+V + I G D + + D + G + + I
Sbjct: 2257 GDDVALSTAAGGFVIDGGAGSDTIAM----------DYTYGGDDVLVGGDGDDYIYAGAG 2306
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G + ND + GN +++ +G+D DG +G DT Y Y + ++
Sbjct: 2307 NDQLDGGADNDTLFGNDGDDLIRGGAGDDTIDGGAGADTATYAGNFAGYATSLNTDGSLI 2366
Query: 328 Y--DANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
A D LS++E+L F D + + + G D F
Sbjct: 2367 VPDQAGTDGADKLSNIEQLVFTDGAWTLRTGTDGNDTIAGGTGNDLVFGGAGNDTFIGGY 2426
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ G D S + DL V+ L
Sbjct: 2427 GLDRYDGGAGDDTIDYSLIDFRLTVDLGAGRAYYPDYLPGADHLFSVENAIGTAFGDTLI 2486
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR-----------FVTFDSYLYLGSYD 493
L D G D G ++ FD+ +
Sbjct: 2487 GTDGANVLNGGLGDDLLFGGAGNDTLIGGGGDDVLRGGSGDDSIDGGAGFDTLDLSDATG 2546
Query: 494 DLRNVFGSDRGA----AARHYITH-------GVKEGRNPDAFKALEYIASHEDLINAFAD 542
+ F + H+ G + + ++ + +
Sbjct: 2547 AVTISFTAGTATGAGIGTDHFTGIESFVLGEGADRVTGGNGADVINGGGGNDVIAGGAGN 2606
Query: 543 APDLVQAGKD 552
AG D
Sbjct: 2607 DKLFGGAGDD 2616
Score = 101 bits (252), Expect = 4e-19, Method: Composition-based stats.
Identities = 56/443 (12%), Positives = 102/443 (23%), Gaps = 62/443 (13%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
SD + G D G T+ ++ I G
Sbjct: 2276 GSDTIAMDYTYGGDDVLVGGDGDDYIYAGAGNDQLDGGADNDTLFGNDGDDLIRGGAGDD 2335
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G N + L + S +P + D + +I +
Sbjct: 2336 TIDGGAGADTATYAGNFAGYATSLNTDGSLIVPDQAGTDGADKLS------NIEQLVFTD 2389
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYID----- 244
GA G + ++ G+D D G + ID
Sbjct: 2390 GAWTLRTGTD---GNDTIAGGTGNDLVFGGAGNDTFIGGYGLDRYDGGAGDDTIDYSLID 2446
Query: 245 ------------------------------LNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ T ++ G + + + + G
Sbjct: 2447 FRLTVDLGAGRAYYPDYLPGADHLFSVENAIGTAFGDTLIGTDGANVLNGGLGDDLLFGG 2506
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+GND +IG ++V SG+D DG +G DT + I
Sbjct: 2507 AGNDTLIGGGGDDVLRGGSGDDSIDGGAGFDTLDLSDATGAVTISFTAGTAT---GAGIG 2563
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D + +E + ++ + + G D G
Sbjct: 2564 TDHFTGIESFVLGEGADRVTGGNGADVINGGGGNDVIAGGAGNDKLFGGAGDDSLDGGSG 2623
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
D+ D L+ G D + + L A ++ +
Sbjct: 2624 DDVV----DGGIGNDTLKGGSGVDIISGGDG-----NDDIDGGSENDILNGGAGNDIIKG 2674
Query: 455 AFADAPDLVQVGKDHFSNFGCEE 477
G D + +
Sbjct: 2675 GSGADIITGGAGNDILTGGSGAD 2697
Score = 92.2 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 75/524 (14%), Positives = 122/524 (23%), Gaps = 39/524 (7%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
NN S M D+ +++ GTIL G
Sbjct: 2218 NNSGSIVATGGSAIDMGAGNDQVNLYVGAAVTGTILLGAGDDVALSTAAGGFVIDGGAGS 2277
Query: 145 PVYGVDNDYENDSF----LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK- 199
+D Y D Y + +D ++ G
Sbjct: 2278 DTIAMDYTYGGDDVLVGGDGDDYIYAGAGNDQLDGGADNDTLFGNDGDDLIRGGAGDDTI 2337
Query: 200 ---GSLGNNIYKIEV----QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
Y ++ + D G D D + D +W+
Sbjct: 2338 DGGAGADTATYAGNFAGYATSLNTDGSLIVPDQAGTDGADKLSNIEQLVFTD---GAWTL 2394
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + N TIA T + V G +GND IG + + +G+D D S
Sbjct: 2395 RTGTDGNDTIAGGTGNDLVFGGAGNDTFIGGYGLDRYDGGAGDDTIDYSLIDFRLTVDLG 2454
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + E+ + L D +L A + LI
Sbjct: 2455 AGRAYYPDYLPGADHLFSVENAIGTAFG-DTLIGTDGANVLNGGLGDDLLFGGAGNDTLI 2513
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDI------TFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
G DV G D T + + G+D +
Sbjct: 2514 GGGGDDVLRGGSGDDSIDGGAGFDTLDLSDATGAVTISFTAGTATGAGIGTDHFTGIESF 2573
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ + + D+I A L D + G +
Sbjct: 2574 VLGEGADRVTGGNGADVINGGGGNDVIAGGAGNDKLFGGAGDDSLDGGSGDDVVDGGIGN 2633
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
L + + G D L A ++ +
Sbjct: 2634 DTLKGGSGVDIISGGDGNDDID-----------GGSENDILNGGAGNDIIKGGSGADIIT 2682
Query: 547 VQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
AG D G F D+ F + S+A
Sbjct: 2683 GGAGND--ILTGGSGADVFVFAAGFG----KDIVTDFATKGSSA 2720
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 50/318 (15%), Positives = 90/318 (28%), Gaps = 19/318 (5%)
Query: 61 EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
+ F +T I +D + + + I DV R G G +I
Sbjct: 2472 SVENAIGTAFGDTLIGTDGANVLNGGLGDDLLFGGAGNDTLIGGGGDDVLRGGSGDDSID 2531
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
L L G + + + F+ + + G
Sbjct: 2532 GGAGFD----TLDLSDATGAVTISFTAGTATGAGIGTDHFTGIESFVLGEGADRVTGG-- 2585
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ V G G + ++ GDD++D GG+
Sbjct: 2586 ------NGADVINGGGGNDVIAGG---AGNDKLFGGAGDDSLDGGSGDDVVD----GGIG 2632
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N I G + N I + + + G +GND++ G S ++ +GND+ G
Sbjct: 2633 NDTLKGGSGVDIISGGDGNDDIDGGSENDILNGGAGNDIIKGGSGADIITGGAGNDILTG 2692
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
SG D F + A + F D + ++ + + + V
Sbjct: 2693 GSGADVFVFAAGFGKDIVTDFATKGSSADVLQFSSSMFANFTDVMSHTTQVGNDVVVTLD 2752
Query: 361 ILEYTASYEDLIQVIGQD 378
I + D
Sbjct: 2753 ADNSLTLANTQIGSLAAD 2770
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 42/139 (30%), Gaps = 7/139 (5%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLL---DLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
Y + D D +L + L G + + + G +
Sbjct: 1617 TAYGEADTDRAHDTRIQNLDYRTDTVLLSMPVDLAGDEGDNELTGSSGDDRLAGLGGDDV 1676
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ +++ G G+D + G ++V +G+D DG +G D +
Sbjct: 1677 LIGLGGDDNLDGGEGDDTLEGGEGDDVLAGGAGDDTLDGGAGDDRL--AGGEGDDTLLGG 1734
Query: 322 ENAIIVYDANEHKQDFLSD 340
+ ++ D L
Sbjct: 1735 DGDDVLIAG--DGYDTLQG 1751
>gi|218249074|ref|YP_002374445.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 8801]
gi|218169552|gb|ACK68289.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 8801]
Length = 1269
Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats.
Identities = 77/383 (20%), Positives = 119/383 (31%), Gaps = 73/383 (19%)
Query: 17 LLRDQYWSN-------YFIRYKPDVLTTHRLSF--DITELNPNAQEVARWALGEWSKVVD 67
LL WS + Y+ DV + E++ + R L +++
Sbjct: 86 LLSGYKWSLSSSNPVITYSFYENDVFGGSYYGSETGVREVSQAVKTNVRSILNSLESIIN 145
Query: 68 LTFEET-----SIHSDIKFISSNN----------GYVCTPRYDSRYFMEINFDKADVWRY 112
+ F E S ++F+ SNN + D +
Sbjct: 146 VDFVEVVETNTSTIGQMRFMVSNNPGYAYAYYPYSNSVQSTAGDIHLNGSYDRLGDTNGF 205
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
GT +HEIGHA+GL H P D+ +VM Y +
Sbjct: 206 QNAPGTHGYMTLIHEIGHAMGLKHSFEATALDP--------ALDNNNYTVMGYNFLYGDV 257
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI------------EVQQKDSPFIQ 220
+T M DI A+Q +YGA + N+ Y+ + Q
Sbjct: 258 ST-----ASTFMPLDIAALQSLYGAKATNTTNDTYRFTNRIDQFTINGQPSVTSSNNIKQ 312
Query: 221 TIYDSGGDDLLDLTL--IGGVKNYIDLNTESWSSIGGYEKNMT----------------I 262
TI D+GG D LD + IDLN + N +
Sbjct: 313 TIVDTGGIDTLDFSQLVSYSAGYRIDLNGSGSITKQDAYLNTNYSVNGVTYKSTSSGTFL 372
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESS-----GNDVFDGSSGLDTFFYYAPSYLYK 317
+ TVIE+VV SS D + NS+ N+ S NDV ++ D +
Sbjct: 373 SYDTVIENVVNSSSKDSIYLNSSANIISGYSSTKATSNDVIYNATSQDLLKLDYNAAQ-I 431
Query: 318 IYRFENAIIVYDANEHKQDFLSD 340
+ + L +
Sbjct: 432 TSTQSGNDRLLRLGTNGSITLKN 454
>gi|257062161|ref|YP_003140049.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 8802]
gi|256592327|gb|ACV03214.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 8802]
Length = 1269
Score = 110 bits (275), Expect = 8e-22, Method: Composition-based stats.
Identities = 77/383 (20%), Positives = 119/383 (31%), Gaps = 73/383 (19%)
Query: 17 LLRDQYWSN-------YFIRYKPDVLTTHRLSF--DITELNPNAQEVARWALGEWSKVVD 67
LL WS + Y+ DV + E++ + R L +++
Sbjct: 86 LLSGYKWSLSSSNPVITYSFYENDVFGGSYYGSETGVREVSQAVKTNVRSILNSLESIIN 145
Query: 68 LTFEET-----SIHSDIKFISSNN----------GYVCTPRYDSRYFMEINFDKADVWRY 112
+ F E S ++F+ SNN + D +
Sbjct: 146 VDFVEVVETNTSTIGQMRFMVSNNPGYAYAYYPYSNSVQSTAGDIHLNGSYDRLGDTNGF 205
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
GT +HEIGHA+GL H P D+ +VM Y +
Sbjct: 206 QNAPGTHGYMTLIHEIGHAMGLKHSFEATALDP--------ALDNNNYTVMGYNFLYGDV 257
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI------------EVQQKDSPFIQ 220
+T M DI A+Q +YGA + N+ Y+ + Q
Sbjct: 258 ST-----ASTFMPLDIAALQSLYGAKATNTTNDTYRFTNRIDQFTINGQPSVTSSNNIKQ 312
Query: 221 TIYDSGGDDLLDLTL--IGGVKNYIDLNTESWSSIGGYEKNMT----------------I 262
TI D+GG D LD + IDLN + N +
Sbjct: 313 TIVDTGGIDTLDFSQLVSYSAGYRIDLNGSGSITKQDAYLNTNYSVNGVTYKSTSSGTFL 372
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESS-----GNDVFDGSSGLDTFFYYAPSYLYK 317
+ TVIE+VV SS D + NS+ N+ S NDV ++ D +
Sbjct: 373 SYDTVIENVVNSSSKDSIYLNSSANIISGYSSTKATSNDVIYNATSQDLLKLDYNAAQ-I 431
Query: 318 IYRFENAIIVYDANEHKQDFLSD 340
+ + L +
Sbjct: 432 TSTQSGNDRLLRLGTNGSITLKN 454
>gi|144897609|emb|CAM74473.1| Peptidase M10A and M12B, matrixin and adamalysin [Magnetospirillum
gryphiswaldense MSR-1]
Length = 1536
Score = 110 bits (274), Expect = 1e-21, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 87/235 (37%), Gaps = 30/235 (12%)
Query: 13 IADHLLRDQYWSN------YFIRYKPDV-----LTTHRLSFDITELNPNAQEVARWALGE 61
LL Q W++ I Y + + + ++ AR AL +
Sbjct: 449 AIQELLSGQKWTDINADGSTIITYSFPDNVPVDYAGQIEAGGFSSFSDPQKDAARAALAQ 508
Query: 62 WSKVVDLTFEETS-IHSDIKFISSNNGYVCTPRY--DSRYFMEINFDKADVWRYGIGKGT 118
W+ ++TF E + +I+F ++ G Y ++ + G
Sbjct: 509 WAAAANITFVEVTGDGGEIRFANTTLGPDVAWTYLPGEGQGGDVWIAPDYADNGQLNPGE 568
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
LHEIGHALGL H G YNGG DS L S+MSYF ++
Sbjct: 569 YGYFTLLHEIGHALGLEHAGDYNGGGSP-----TNAYDSRLYSIMSYF------GGSALE 617
Query: 179 YCATPMVSDIVAVQKIYGA-----PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
Y +DI A+Q +YGA LG ++ + ++ + D GD
Sbjct: 618 YPLNLQENDIAAIQALYGAKGVDLASYFLGGLSVTLQAGNAGAAWMVSDIDYDGD 672
>gi|323135550|ref|ZP_08070633.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
gi|322398641|gb|EFY01160.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
Length = 906
Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 85/224 (37%), Gaps = 36/224 (16%)
Query: 393 EGRDIT---FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIAS 448
+G D+ FD+ Y+ +Y D+ A HY G + GR+P A F EY+ +
Sbjct: 17 DGVDVIRQHFDAQFYVSAYPDVA----DSSIDPAEHYFVVGWRHGRDPCAWFSTEEYLKA 72
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ D+ A + H+ G EEGR V + S + +
Sbjct: 73 NGDVAEADVNP-------FYHYLTHGREEGRVVV--ASRLSDSRGGAASHSAGTESSRRP 123
Query: 509 HYITHGVKE-----GRNP--DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
G+ E R+ AF Y +++ DL P DHF+ G+ E
Sbjct: 124 PEGAPGMSEDVLAQQRSVVAGAFDTNFYRSTYPDLH------PLNDDQLVDHFNEHGWRE 177
Query: 562 GRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
R F+ + YL Y D+ G HY+ +G +EGR
Sbjct: 178 HRDPCPWFSTNYYLKRYPDI----GRSSINPLYHYLAYGQREGR 217
Score = 95.6 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/226 (21%), Positives = 80/226 (35%), Gaps = 32/226 (14%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSY 408
+D + + +A + I + +H++ G GRD F + YL +
Sbjct: 19 VDVIRQHFDAQFYVSAYPDVADSSI-----DPAEHYFVVGWRHGRDPCAWFSTEEYLKAN 73
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGR---NPDAFKALEYIASHEDLINAFADAPDLVQV 465
D+ HY+THG +EGR + ASH A ++
Sbjct: 74 GDVAEA----DVNPFYHYLTHGREEGRVVVASRLSDSRGGAASHS----AGTESSRRPPE 125
Query: 466 GKDHFSNFGCEEGRFV---TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
G S + R V FD+ Y +Y DL + + H+ HG +E R+P
Sbjct: 126 GAPGMSEDVLAQQRSVVAGAFDTNFYRSTYPDLHPL---NDDQLVDHFNEHGWREHRDPC 182
Query: 523 A-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
F Y+ + D+ + H+ +G EGR +
Sbjct: 183 PWFSTNYYLKRYPDIGRS-------SINPLYHYLAYGQREGRLPDY 221
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 56/154 (36%), Gaps = 29/154 (18%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F A Y++++ D+ D +H+ G+ GR F+ + YL + D+
Sbjct: 26 FDAQFYVSAYPDVA-------DSSIDPAEHYFVVGWRHGRDPCAWFSTEEYLKANGDVAE 78
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGIS------------GMQFKSVMNLSEKSRDKADLS 629
HY+THG +EGR + S +S E + ++
Sbjct: 79 A----DVNPFYHYLTHGREEGRVVVASRLSDSRGGAASHSAGTESSRRPPEGAPGMSEDV 134
Query: 630 LSFDHKKVDLYTDYFGDGNYYDSDLYSMHDINHD 663
L+ V D N+Y S +H +N D
Sbjct: 135 LAQQRSVVAGAFDT----NFYRSTYPDLHPLNDD 164
>gi|329848977|ref|ZP_08264005.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844040|gb|EGF93609.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1784
Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats.
Identities = 93/546 (17%), Positives = 161/546 (29%), Gaps = 93/546 (17%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLS--------FDITELNPNAQEVARWAL 59
+T + D +L W+ I + + N Q +A+
Sbjct: 157 FTGNQDIDAVLFGSRWTLSTITFSFPTSGAQYATPYYDPGYLTSHVAFNAAQQTAGEYAM 216
Query: 60 -----GEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRY----DSRYFMEINFD-KADV 109
G S V+ + + I+ + + + + + +I F
Sbjct: 217 LTLMRGYVSTFVNEIAPSLATPATIRMSQTTDASLGSAEGNFPGSDSWDGDIWFGMTGQP 276
Query: 110 WRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY-------------GVDNDYEND 156
+ G +HEIGHA+GL H G+ + +D
Sbjct: 277 FYLTPQIGNWGQATIMHEIGHAMGLKHGHQDYTGFDLTVGGYLDGPGPRFGTRALPASHD 336
Query: 157 SFLTSVMSYFMPQDSMMDA-------SFGYCATPMVSDIVAVQKIYGA----PKGSLGNN 205
S+ S+M+Y + F T M +DI A+Q +YGA P+ +
Sbjct: 337 SWAYSIMTYRSDPGNNPGGNPSFQGDQFNQPQTFMQNDIAALQYMYGADFTSPEAHPTDT 396
Query: 206 IYKIEV-------------------QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+Y +TI+D GG D D + IDL
Sbjct: 397 VYTFNSITGRMSINGVGQETPTFDAVNNVGKIFRTIWDGGGVDTYDFDNYTTNQ-TIDLT 455
Query: 247 TESWSSIGGYE---------------KNMTIA------QHTVIESVVGSSGNDVVIGNSA 285
WS++ + N+ A ++IE+ G SGND +IGN
Sbjct: 456 PGGWSTMNSLQLADLRPLSATYVAAPGNIANALLYNGDLRSLIENANGGSGNDNIIGNDV 515
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
NNV + GND G G D + + + + VY + + +
Sbjct: 516 NNVIHGNGGNDTVFGDDGNDLLY--GEAGNDTLDGWIGNDSVYGGDGND--------FMY 565
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
D + L + + L G D + L E DI ++
Sbjct: 566 GYDGNDFLIASTGLDTLRGESGNDYLSGGTGNDSMVGDTGNDTYVLEEAGDIVVEAASEG 625
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ + G +G A + + + L+ A +
Sbjct: 626 TDLVYAYFSYTLLANFENLTLLGTGNFDGTGNSAANLIYGNSFNNVLLGGGGGADTIFGQ 685
Query: 466 GKDHFS 471
G D +
Sbjct: 686 GGDDYI 691
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/336 (16%), Positives = 93/336 (27%), Gaps = 23/336 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+T+ G DLLD T I+L T + +G T
Sbjct: 847 TGNDTAFAGIGNETMIGGSGTDLLDTTSWSLA-YTINLATGLTNFVGESF--------TG 897
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI-- 325
E++ +GND + G NV +GND DG G D+ A Y I F N
Sbjct: 898 FENLTTGAGNDSLTGTFGVNVINGGAGNDTIDGGFGYDSLDGGAGIDTYDISGFTNLTGA 957
Query: 326 -----IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + + E + A + ++ + + G D
Sbjct: 958 TINLATGLYTDGSGSETILNFENVLGAGGDQSYFGTNGANFIDGGDGNDLIDSGGGNDTV 1017
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ G TF S YLG D G + G + D
Sbjct: 1018 QGGAGNDTIG-----TTTFSSRSYLGQGGDDVISGGFNYGDTWDGGAGVDTADLTLHDFT 1072
Query: 441 KALEYIASHEDLINAFAD--APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
++ +A +N + + G + + G E + +
Sbjct: 1073 ATVDLLAGTYTTVNGTLNILNFENFNAGNQNDTIIGTSEANVINGGGGNDDIDGYSGNDT 1132
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
G H + G+K + +
Sbjct: 1133 VDGGAGDDFIHSSSAGIKVYNGGAGNDTVGGNFGYN 1168
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 60/467 (12%), Positives = 115/467 (24%), Gaps = 17/467 (3%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
S N E +++ A +SD G
Sbjct: 1218 GFSDAESITGTSGANSIEGGDGDDTLVGGAGSDTLNGGAGNDSINAGALSDGTDTVNGNG 1277
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ + +I G +++D N + +
Sbjct: 1278 GDDTIVSSGQGTYNGGL-GDDYIYAGLTGAGAEVIDGGDGIDTLNTTLWGGDYLVDLTTG 1336
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ E+++ SGND + G + N +G DV G +G DT+ +
Sbjct: 1337 LTDTATEDFDNFENIISGSGNDTITGTAGANSIDGGAGADVLTGGAGDDTYIVDNTADDV 1396
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+V + + + I++ + L + L G
Sbjct: 1397 NESSGGGNDLVRASVSYSLAGMVVETLTLMGVADINATGNGNGNTLNGNSGNNVLDGAAG 1456
Query: 377 QDVFESMKHFYEFG-----------LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
D + EG D F + Y + + N + AA
Sbjct: 1457 ADTMLGGLGNDSYYVNVAGDVVTEVAGEGNDTIFTALTYSLAGKQVEN-LTLEGAAAVNG 1515
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ A L+ + H+ + + G D + + +
Sbjct: 1516 TGNGLANVLKGNSAANTLDGGSGHDRVDGGLGADNLIGGTGNDTYVVDNAGDTVTEGAGA 1575
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
G + +G V G D L +++ L +
Sbjct: 1576 ---GGDLVESSVTYGLSLNVENLTLTGAAVINGSGNDLNNVLTGNSANNVLAGGLGNDTY 1632
Query: 546 LVQAGKDHFSNFGYEEGRSITFNPDLYLT-SYDDLWNVFGSDRSAAA 591
VQ D+ + G I L Y + + G+ A
Sbjct: 1633 YVQNTGDNVTEVGGAGIDLIYSTVSYSLAGRYAETITLTGAANINAT 1679
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 43/348 (12%), Positives = 94/348 (27%), Gaps = 26/348 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ I+ +GG+D + G N + ++ G+ N ++
Sbjct: 505 SGNDNIIGNDVNNVIHGNGGNDTV----FGDDGNDLLYGEAGNDTLDGWIGNDSVYGGDG 560
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-------IYR 320
+ + G GND +I ++ + SGND G +G D+ + Y +
Sbjct: 561 NDFMYGYDGNDFLIASTGLDTLRGESGNDYLSGGTGNDSMVGDTGNDTYVLEEAGDIVVE 620
Query: 321 FENAIIVYDANEHKQDFLSDVERLR-FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ L++ E L D +++ + L+ G
Sbjct: 621 AASEGTDLVYAYFSYTLLANFENLTLLGTGNFDGTGNSAANLIYGNSFNNVLLGGGGGAD 680
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG-VKEGRNPD 438
+ ++ + + L G+D Y G +
Sbjct: 681 TIFGQGGDDYIWNTNF-----------ANHSLNGGSGNDTVGGGFQYGGTWDGSTGVDMV 729
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
++A++ + + + N G + D+ L ++
Sbjct: 730 DMTLHNFVATYNLVTGTYTTGGGTQNILNFENVNAGDQNDTINGSDAVNALYGNGGNDSI 789
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
G A Y G+ L A + + +
Sbjct: 790 NGLGGHDAL--YGGAGIDTLNGGTGNDTLLGGAGADIVNGQDGNDVIT 835
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 67/513 (13%), Positives = 120/513 (23%), Gaps = 52/513 (10%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ T + + AD+ G I S G +
Sbjct: 797 ALYGGAGIDTLNGGTGNDTLLGGAGADIVNGQDGNDVITSSGDSGTYDGGTGNDTAFAGI 856
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA----VQKIYGA 197
G + G D+ S+ + + A + +G
Sbjct: 857 GNETMIGGSGTDLLDTTSWSLAYTINLATGLTNFVGESFTGFENLTTGAGNDSLTGTFGV 916
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGGY 256
+ G ++ G D D++ I+L T ++ G
Sbjct: 917 NVINGG----AGNDTIDGGFGYDSLDGGAGIDTYDISGFTNLTGATINLATGLYTDGSGS 972
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E + E+V+G+ G+ G + N GND+ D G DT A +
Sbjct: 973 ETIL------NFENVLGAGGDQSYFGTNGANFIDGGDGNDLIDSGGGNDTVQGGAGNDTI 1026
Query: 317 KIYRF-------ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR---------- 359
F + V + D + AD +
Sbjct: 1027 GTTTFSSRSYLGQGGDDVISGGFNYGDTWDGGAGVDTADLTLHDFTATVDLLAGTYTTVN 1086
Query: 360 -----------------SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+ T+ + G D + G D S
Sbjct: 1087 GTLNILNFENFNAGNQNDTIIGTSEANVINGGGGNDDIDGYSGNDTVDGGAGDDFIHSSS 1146
Query: 403 LYL--GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+ + + G + G + GV F L + +
Sbjct: 1147 AGIKVYNGGAGNDTVGGNFGYNSSFDGGTGVDLLDMSFVFSTLLPVTFDMNTGAWVDGIG 1206
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
V +++ F E T + G D V G+ + G
Sbjct: 1207 PFSAVNFENYIGFSDAESITGTSGANSIEGGDGDDTLVGGAGSDTLNGGAGNDSINAGAL 1266
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
D + +D I + G D+
Sbjct: 1267 SDGTDTVNG-NGGDDTIVSSGQGTYNGGLGDDY 1298
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 42/157 (26%), Gaps = 6/157 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWSSIGGYEKNMTIA 263
+ + + G+D + G IDL + S TI
Sbjct: 1610 LNNVLTGNSANNVLAGGLGNDTYYVQNTGDNVTEVGGAGIDLIYSTVSYSLAGRYAETIT 1669
Query: 264 -QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G+S + + GN NN GND G G D F + A S I F
Sbjct: 1670 LTGAANINATGNSLGNTLNGNDGNNTINGKGGNDALTGGLGADIFLFEAASGSDTIGDFS 1729
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
A + + + +
Sbjct: 1730 AAQSDLININAYTGGVVNNALVVQVGANVVINLGGGN 1766
>gi|238623419|emb|CAS06704.1| alkaline metalloprotease [Pseudomonas fragi]
Length = 197
Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 61/164 (37%), Gaps = 11/164 (6%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI--HSDIK 80
+ F+ P T L ++ + +E A+ +L W+ V +TF E + D
Sbjct: 25 LTYTFLTAPPVGYATRGLG-TFSQFSSLQKEQAKLSLESWADVAKVTFTEGAAVRGGDGH 83
Query: 81 FISSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+N + P + +K G+G HEIGH LG
Sbjct: 84 MTFANFSASNGGAAFAYLPSSSRKGESWYLINKDYAVNKIPGEGNYGRQTLTHEIGHTLG 143
Query: 134 LMHPGSYNGGY-PVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
L HPG YN G D Y D+ SVMSY+ ++ +
Sbjct: 144 LSHPGDYNAGNGNPTYRDAVYGEDTRAYSVMSYWSESNTGQHFT 187
>gi|146329811|ref|YP_001209158.1| calcium-binding domain-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146233281|gb|ABQ14259.1| calcium binding domain protein [Dichelobacter nodosus VCS1703A]
Length = 482
Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats.
Identities = 75/434 (17%), Positives = 125/434 (28%), Gaps = 85/434 (19%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
A HE+ H+LGL HP + P E+DS S+MSY D
Sbjct: 48 DSSPEAEYDSWLTAAHELLHSLGLTHPFKEDNMPPHKKFLTVEEDDSMGVSIMSYQDNYD 107
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT-IYDSGGD 228
F + D+ + YG K G+++Y + + I+D GG
Sbjct: 108 ------FVGAKDFRIFDLAYLHYRYGVSKTARAGDDVYSFKTFNQSCADNDIYIWDGGGI 161
Query: 229 DLLDLTLIGGV----------------------------KNYIDLNTESWSSIGGYEKNM 260
D D + + L +S ++ N+
Sbjct: 162 DTFDASQEENSVYVNLTPGSWIYSGEKLDKFAVKENFVRDIHDFLGKDSITTEAVAVGNV 221
Query: 261 ------------------------TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
I +T IE + GS+ NDV+IGN A+N F +G+D
Sbjct: 222 EKSKINFIPTFNRILNCDFTEGQAFIGFYTQIERLKGSAFNDVLIGNKADNQIFGGAGDD 281
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD------------------ANEHKQDFL 338
DG G D + + + E I ++
Sbjct: 282 KIDGGEGDD--YLDGGLGVDILRGGEGNDIYIVDDNRDEIIELGSGIDTVYSSATDYTLA 339
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
VE + +++ + L + L G D+ G D
Sbjct: 340 DKVEHIVLLTGARNAIGNALDNKLFGNSGDNILEGGDGDDILIGGGGNDTLIGGAGNDQF 399
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
F G +++ D+ ++ +N Y+ E+ F D
Sbjct: 400 FIDCTLDGDITTIKDFQKGDKLQLNHEIFKELSQDTQNLQD-----YLIYDEESGELFYD 454
Query: 459 APDLVQVGKDHFSN 472
+ HF+
Sbjct: 455 SDGSGIADPIHFAT 468
>gi|119487881|ref|ZP_01621378.1| hypothetical protein L8106_28496 [Lyngbya sp. PCC 8106]
gi|119455457|gb|EAW36595.1| hypothetical protein L8106_28496 [Lyngbya sp. PCC 8106]
Length = 2050
Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 98/256 (38%), Gaps = 16/256 (6%)
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ A + + E +++ D +D + Y D+ ++
Sbjct: 102 GDGAGPISELPEEGVQTGVEMDDTEATDDILDE----LFDVDAYLEFNSDIKTLVEAGQL 157
Query: 381 ESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP- 437
++ HF EFG EGR+ +F+ Y D+ V R + H++ G++EGR
Sbjct: 158 DAKAHFMEFGKFEGREFSYSFNITEYAEKNVDVSQVVS--RQSLLSHFLEFGLEEGREFN 215
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
F +Y+ + D+ N F G HF FG E R F YL DL
Sbjct: 216 SLFSVKKYLEKNTDIDNVFQGQG-KFVSGFRHFLKFGQYEQRECGDFFKPSEYLSLNSDL 274
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ + + +H+ G KE R FK EY+ +++L++ DH+
Sbjct: 275 ESFVQGGQFSLFKHFNKFGKKERREFSNFFKVSEYLQLNQELVDFVQSGQIT---AVDHW 331
Query: 555 SNFGYEEGRSITFNPD 570
FG E R +F+
Sbjct: 332 LQFGRLENREFSFSFS 347
Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 102/267 (38%), Gaps = 16/267 (5%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLIN 454
D FD YL D++ + + + A H++ G EGR +F EY + D+
Sbjct: 133 DELFDVDAYLEFNSDIKTLVEAGQLDAKAHFMEFGKFEGREFSYSFNITEYAEKNVDV-- 190
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSD--RGAAARHY 510
Q HF FG EEGR F YL D+ NVF + RH+
Sbjct: 191 ---SQVVSRQSLLSHFLEFGLEEGREFNSLFSVKKYLEKNTDIDNVFQGQGKFVSGFRHF 247
Query: 511 ITHGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--F 567
+ G E R F K EY++ + DL + + HF+ FG +E R + F
Sbjct: 248 LKFGQYEQRECGDFFKPSEYLSLNSDLESFVQGGQFSL---FKHFNKFGKKERREFSNFF 304
Query: 568 NPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKAD 627
YL +L + S + A H++ G E R S K + L + + D
Sbjct: 305 KVSEYLQLNQELVDFVQSGQITAVDHWLQFGRLENREFSFSFSVSKVLEVLGISTLAELD 364
Query: 628 LSLSFDHKKVDLYTDYFGDGNYYDSDL 654
+ + + GD N +D+
Sbjct: 365 IEQLVESIVSNFNLIATGDDNTDGNDI 391
>gi|296444476|ref|ZP_06886441.1| glycosyl transferase family 2 [Methylosinus trichosporium OB3b]
gi|296258123|gb|EFH05185.1| glycosyl transferase family 2 [Methylosinus trichosporium OB3b]
Length = 962
Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats.
Identities = 55/275 (20%), Positives = 81/275 (29%), Gaps = 74/275 (26%)
Query: 389 FGLSEGRD-ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYI 446
G+ GR FD+ Y + + H++ HG +EGRNP +F L Y
Sbjct: 9 IGVRLGRGLPHFDAEYYAAA----YPDVAAAGIDPLAHFLRHGWREGRNPSWSFHTLYYR 64
Query: 447 ASHED-----------LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
+ L N A + ++ + FD Y Y
Sbjct: 65 DENPSCGRRENPLLHYLANKHAQPLRVFPETEEELIEL-QKRVVAGHFDEDFYRLKYL-- 121
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHE-------------------- 534
G+ A HY+ G + G +P F Y+ ++
Sbjct: 122 ---GGALDCDALDHYLRSGWRLGFDPSADFSTNNYLDANSHARAAKVSPLYHHVATRSMA 178
Query: 535 ---------------------DLINAFADAPDLVQAGKD---HFSNFGYEEGRSIT--FN 568
D PD+ D H+ G+ EGR + F
Sbjct: 179 AQAPRVAPARANIAAALAPEFDAGFYLRANPDVAAQKLDPLAHYIERGWREGRDPSAVFW 238
Query: 569 PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
YL+S D+ HYIT G EGR
Sbjct: 239 TSYYLSSNPDVRAA----GENPFHHYITRGRGEGR 269
Score = 87.9 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 61/178 (34%), Gaps = 26/178 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 457
FD Y Y + G+ A HY+ G + G +P F Y+ ++ A
Sbjct: 111 FDEDFYRLKY-----LGGALDCDALDHYLRSGWRLGFDPSADFSTNNYLDANSHARAAKV 165
Query: 458 DA--------PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
Q + + FD+ YL + D+ + H
Sbjct: 166 SPLYHHVATRSMAAQAPRVAPARANIAAALAPEFDAGFYLRANPDVAAQ----KLDPLAH 221
Query: 510 YITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
YI G +EGR+P A F Y++S+ D+ A + H+ G EGR
Sbjct: 222 YIERGWREGRDPSAVFWTSYYLSSNPDVRAA-------GENPFHHYITRGRGEGRKPN 272
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 45/128 (35%), Gaps = 24/128 (18%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD+ YL + D+ + HYI G +EGR+P A F Y++S+ D+ A
Sbjct: 197 PEFDAGFYLRANPDVAA----QKLDPLAHYIERGWREGRDPSAVFWTSYYLSSNPDVRAA 252
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ H+ G EGR + AA+ + GV
Sbjct: 253 GENP-------FHHYITRGRGEGRKP----------NPVGALAWPKPTAPAAQEWN--GV 293
Query: 516 KEGRNPDA 523
+ R
Sbjct: 294 RPARQVAN 301
>gi|152991140|ref|YP_001356862.1| hypothetical protein NIS_1398 [Nitratiruptor sp. SB155-2]
gi|151423001|dbj|BAF70505.1| hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 609
Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats.
Identities = 67/402 (16%), Positives = 126/402 (31%), Gaps = 63/402 (15%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDIT------ELNPNAQEVARWALGEWSKVVDLTFEE 72
+ I Y + +I+ LN Q R A E V+ + FEE
Sbjct: 214 QGAKIDKDIITYSFPQVMPLEYQDEISYSNHWQPLNLIDQSRVREAFHELGSVLGVRFEE 273
Query: 73 TSIHSDIKFI------SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ DI+F G+ YD + + LH
Sbjct: 274 VDSNGDIRFSKVTPSSQDEAGFAVQEIYDGK-MVTSGVGSDIFLANDYDVIAAPKDVILH 332
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQ---------DSMMDASF 177
EIGHA GL HP D+ L ++MSY + + +
Sbjct: 333 EIGHAFGLKHPFEG-------SPTMPSSYDNTLYTIMSYTQEETALPEITMKNLGDSFEY 385
Query: 178 GYCATP------MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
P D++A++ +YG+ + L N Y I + I D GG D
Sbjct: 386 TVQTDPIGRKSIGYYDLLALRYLYGSTEHDLTNETYDI-SDLYNQHAFAHIVDDGGIDT- 443
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ L YIDL + S G + +++ + + + + + ++++
Sbjct: 444 -VVLDSQEPAYIDLRGGEFLSSIG----DHLPFNSIKQQIQEQMSLEDIPSSYFDDIYAG 498
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
V D PS+ +IY+ +N + + + + +E +
Sbjct: 499 -----VLD-------IIQQNPSFKAQIYQGKNVVTLPENS---------IENIVATGADE 537
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ + + + + + G D + + L +
Sbjct: 538 IIYDNALDNRIITGSGNDIIYVSQGDDTIDGGEGIDTVYLPD 579
>gi|119358090|ref|YP_912734.1| FG-GAP repeat-containing protein [Chlorobium phaeobacteroides DSM
266]
gi|119355439|gb|ABL66310.1| FG-GAP repeat protein [Chlorobium phaeobacteroides DSM 266]
Length = 2807
Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats.
Identities = 88/684 (12%), Positives = 177/684 (25%), Gaps = 42/684 (6%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE 72
+ + L ++ + S D+ N + W+ +L E
Sbjct: 537 VGNDTLDGGSGADSMAGSIGNDTYVVNYSLDVVTENAGEGTDLVQSSTGWTLGANLENLE 596
Query: 73 TSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ ++ + ++ N T + AD GIG T + + +L
Sbjct: 597 LTGTANTRGTGNDLDNRITGNSGKNTLVGGAGNDTLDGGSGADNMAGGIGDDTYVVNYSL 656
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+ G + G + + + + + D+ + + G
Sbjct: 657 DVVTENAGEGTDLVQSSTGWTLGANVEQLELTGMANARGTGNELDNRITGNIGSNMLAGD 716
Query: 186 SDIVAVQKIYGAPKGSLGNNIY----KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+ + G G I + + D+ +DL
Sbjct: 717 AGKDTLLGGAGNDTLDGGTGADSMAGGIGDDIYVVNYSLDVVTENADEGIDLVQSSTGWT 776
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
L + N + + G+SG + + G + N+ +G D G
Sbjct: 777 ---LGANLENLELTGTANTRGTGNDHDNRITGNSGKNTLTGGAGNDTLDGGTGADSMAGG 833
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF-ADQCIDSVNVKQRS 360
G DT+ L + + + + +++E L + +
Sbjct: 834 IGNDTYVVNYS--LDVVTENADEGVDLVQSSVSWTLGANIENLELISTGNTRGTGNDLNN 891
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ L+ G D + G DI G G D
Sbjct: 892 RITGNIGKNTLVGGAGNDTLDGGSGADSMDGGIGDDIY--VVNSSGDVVTENADEGIDLV 949
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEG 478
++ + E + D + + G D +
Sbjct: 950 QSSISWTLSPNVENLELTGTANARGTGNDLDNRITGNSGKNTLVGGAGNDTLDGGSGADS 1009
Query: 479 RFVTFDSYLYLGSYD-------------DLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
Y+ +Y +++ G GA H G R
Sbjct: 1010 MAGGIGDDAYVVNYSLDVVTEHADEGIDLVQSSTGWTLGANVEHLELTGTANTR-GSGND 1068
Query: 526 ALEYIASHED---LINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNV 582
I + L + G D G E +IT++ + SY + N+
Sbjct: 1069 LDNRITGNSGQNILTGGAGNDSLDGGDGDDIAVFSGNHEDYTITYDEASF--SYTVVDNI 1126
Query: 583 FGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKV-DLYT 641
D + T +G L + S +S L + + T
Sbjct: 1127 ADRDGTDVVSFVETFQFADGTILAEDAITVNSDPVISLPVELSFASRLDYTTGRGPWSVT 1186
Query: 642 DYFGDGNYYDSDLYSMHDINHDFS 665
+G+ Y +DL + + + H S
Sbjct: 1187 SADVNGDGY-ADLITANSLEHSVS 1209
Score = 92.9 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/322 (14%), Positives = 84/322 (26%), Gaps = 24/322 (7%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G + N + + ++G GND +IG + N+ SG D DG G D +
Sbjct: 413 NDTLNGTDGNDLLNGFDGNDLLLGFEGNDTLIGGAGNDTLDGGSGADSMDGGIGDDIYVV 472
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASY 368
S + + I + ++VE L + + +
Sbjct: 473 N--SSGDVVTENADEGIDLVQSSVSWTLGANVENLELTGMANTRGTGNDHDNRITGNSGK 530
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
L +G D + S G D Y G+D ++ +
Sbjct: 531 NTLSGGVGNDTLDGGSGADSMAGSIGNDTY--VVNYSLDVVTENAGEGTDLVQSSTGWTL 588
Query: 429 HGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
E + D + + G D +
Sbjct: 589 GANLENLELTGTANTRGTGNDLDNRITGNSGKNTLVGGAGNDTLDGGSGADNMAGGIGDD 648
Query: 487 LYLGSYD-------------DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
Y+ +Y +++ G GA G+ R + I +
Sbjct: 649 TYVVNYSLDVVTENAGEGTDLVQSSTGWTLGANVEQLELTGMANAR-GTGNELDNRITGN 707
Query: 534 ---EDLINAFADAPDLVQAGKD 552
L L AG D
Sbjct: 708 IGSNMLAGDAGKDTLLGGAGND 729
>gi|332295249|ref|YP_004437172.1| glycosyl transferase family 2 [Thermodesulfobium narugense DSM
14796]
gi|332178352|gb|AEE14041.1| glycosyl transferase family 2 [Thermodesulfobium narugense DSM
14796]
Length = 867
Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 56/124 (45%), Gaps = 18/124 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL SY D+R HYI G KE RNP+ F+ Y+ + D++ +
Sbjct: 23 FDEIYYLKSYPDVRAA----DIDPIEHYILFGAKERRNPNIYFQTGFYLDKYPDMVQS-G 77
Query: 542 DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
P L H+ FG +EGR + F+ + YL + D+ R HYI G
Sbjct: 78 INPLL------HYILFGAKEGRWPNPEFDSEYYLLANPDVKKA----RLNPLLHYILFGQ 127
Query: 600 KEGR 603
KEGR
Sbjct: 128 KEGR 131
Score = 81.4 bits (199), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 18/125 (14%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD YL SY D+R HYI G KE RNP+ F+ Y+ + D++ +
Sbjct: 22 LFDEIYYLKSYPDVRAA----DIDPIEHYILFGAKERRNPNIYFQTGFYLDKYPDMVQSG 77
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ H+ FG +EGR+ FDS YL + D++ + HYI G
Sbjct: 78 INPLL-------HYILFGAKEGRWPNPEFDSEYYLLANPDVKKARLN----PLLHYILFG 126
Query: 515 VKEGR 519
KEGR
Sbjct: 127 QKEGR 131
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 18/131 (13%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
+ Y SY D+ + ++H+ FG E R+ F + YL Y D+
Sbjct: 21 GLFDEIYYLKSYPDVRAAD----IDPIEHYILFGAKERRNPNIYFQTGFYLDKYPDMVQS 76
Query: 415 FGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
HYI G KEGR P+ F + Y+ ++ D+ A + H+ F
Sbjct: 77 ----GINPLLHYILFGAKEGRWPNPEFDSEYYLLANPDVKKARLNPLL-------HYILF 125
Query: 474 GCEEGRFVTFD 484
G +EGR D
Sbjct: 126 GQKEGRKTKGD 136
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
F+ YL SY D+ +HYI G KE R I
Sbjct: 23 FDEIYYLKSYPDVRAA----DIDPIEHYILFGAKERRNPNI 59
>gi|254425464|ref|ZP_05039181.1| Cna protein B-type domain [Synechococcus sp. PCC 7335]
gi|196187887|gb|EDX82852.1| Cna protein B-type domain [Synechococcus sp. PCC 7335]
Length = 1041
Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 82/285 (28%), Gaps = 16/285 (5%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ I + GDD L GG ++ I + G + T+ ++
Sbjct: 712 DFGNQQRALNIINGTSGDDTL----FGGKRDDILFGLAGNDFLDGGNGDDTLDGGRGNDT 767
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND++IG + N+ GND DG G D + + ++
Sbjct: 768 LFGGNGNDILIGGADNDTLDGGKGNDTLDGGRGND--LLTGGRGSDSLLGSDGNDTLFGG 825
Query: 331 NEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
++ D + L + L + L D + K
Sbjct: 826 GDNDTLDGGKGNDTLNGDKGNDTLDGGRGSDALFGNDGNDILSGGADNDTLDGGKGNDTL 885
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G D+ G D+ FG+D + G N + L +
Sbjct: 886 DGGRGNDLLNG-----GRGLDVL--FGNDGNDILSGGADNDTLNGGNGN--DTLNGGKGN 936
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ L L G D G + ++ S D
Sbjct: 937 DTLDGGKGRDLLLGNDGNDTLIGGGNNDTLTGGNGRDTFVLSLGD 981
Score = 91.8 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 81/299 (27%), Gaps = 9/299 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ T + + I D G G T+ + G
Sbjct: 751 DGGNGDDTLDGGRGNDTLFGGNGNDILIGGADNDTLDGGKGNDTLDGGRGNDLLTGGRGS 810
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G ++G ++ D + + +D G A +
Sbjct: 811 DSLLGSDGNDTLFGGGDNDTLDGGKGNDTLNGDKGNDTLDGGRGSDALFGND---GNDIL 867
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + K + G D+L G N I ++
Sbjct: 868 SGGADNDTLDGG-KGNDTLDGGRGNDLLNGGRGLDVL----FGNDGNDILSGGADNDTLN 922
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N T+ +++ G G D+++GN N+ ND G +G DTF
Sbjct: 923 GGNGNDTLNGGKGNDTLDGGKGRDLLLGNDGNDTLIGGGNNDTLTGGNGRDTFVLSLGDG 982
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
I F+ ++ A LS V + D + +S L+
Sbjct: 983 FDTITDFDTKDLIGLAGGLSLGALSFVGNDIFVTDTSEMLATLTGIDTSSLNSSQFVLV 1041
Score = 80.6 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 66/280 (23%), Gaps = 22/280 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+SG+D + G +++ F +GND DG +G DT ++ I+
Sbjct: 723 INGTSGDDTLFGGKRDDILFGLAGNDFLDGGNGDDTL--DGGRGNDTLFGGNGNDILIGG 780
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
++ K L+ + L G D
Sbjct: 781 ADNDT-----------------LDGGKGNDTLDGGRGNDLLTGGRGSDSLLGSDGNDTLF 823
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
D D N + + G L+ ++
Sbjct: 824 GGGDNDTLDGGKGNDTLNGDKGNDTLDGGRGSDALFGNDGNDILSGGADNDTLDGGKGND 883
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
L + G D + D+ G + G
Sbjct: 884 TLDGGRGNDLLNGGRGLDVLFGNDGNDILSGGADNDTLNGGNGNDTLNGGKGNDTLD--- 940
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
G D L +++ L ++ G
Sbjct: 941 GGKGRDLLLGNDGNDTLIGGGNNDTLTGGNGRDTFVLSLG 980
>gi|323138318|ref|ZP_08073389.1| Rhamnan synthesis F [Methylocystis sp. ATCC 49242]
gi|322396401|gb|EFX98931.1| Rhamnan synthesis F [Methylocystis sp. ATCC 49242]
Length = 754
Score = 107 bits (266), Expect = 8e-21, Method: Composition-based stats.
Identities = 64/345 (18%), Positives = 100/345 (28%), Gaps = 115/345 (33%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFG 416
YT +Y D +G+ + ++H+ G EGR+ F++ YL +Y D+
Sbjct: 24 FDTDYYTHAYPD----VGEAKIDPLQHYLTAGWREGRNPNLNFNTIWYLHAYQDVA---- 75
Query: 417 SDRGAAARHYITHGVKEGRNPDA------------------------------------F 440
Y+ G GR F
Sbjct: 76 RQNQNPLVDYVNGGQASGRLSSPPVDESSWMTKAAENEFLPASAREFIACYDMIKKSVLF 135
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNV 498
Y + D +HF G G FD YL SY+D+R
Sbjct: 136 DETFYTTCYPDAQ----------GDPLEHFIRNGWRLGYHPSPNFDMRKYLQSYEDVRAS 185
Query: 499 FGSDRGAAARHYITHGVKEGRNPDA----------------------------------- 523
+ HY+ G +EGR +
Sbjct: 186 GQN----PLIHYLKSGRREGRRIEPLPESETWKLHAGTRVHQGAPLYATLFEKQISATLL 241
Query: 524 -----FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
F A Y+ + D+ +A P + HF + G E RS F+ + Y Y
Sbjct: 242 DESGLFDAEWYLNRYPDVRSA-GMDP------RGHFISSGSAEFRSPGPGFDAEWYCRRY 294
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
+D+ + + HY+ G EGR + LS+
Sbjct: 295 EDVLD----EGYEPLVHYVKFGRAEGRDATPPTPDYTYTYALSDP 335
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 37/124 (29%), Gaps = 16/124 (12%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F Y ++ D+ A P H+ G+ EGR+ FN YL +Y D+
Sbjct: 24 FDTDYYTHAYPDVGEA-KIDPL------QHYLTAGWREGRNPNLNFNTIWYLHAYQDVAR 76
Query: 582 VFGSDRSAAAQHYITHGMKEGR-ALGISGMQFKSVMNLSEKSRDKADLSLS--FDHKKVD 638
Y+ G GR + + + +D K
Sbjct: 77 ----QNQNPLVDYVNGGQASGRLSSPPVDESSWMTKAAENEFLPASAREFIACYDMIKKS 132
Query: 639 LYTD 642
+ D
Sbjct: 133 VLFD 136
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 61/175 (34%), Gaps = 24/175 (13%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ YL Y D+R+ H+I+ G E R+P F A Y +ED+++
Sbjct: 246 LFDAEWYLNRYPDVRSA----GMDPRGHFISSGSAEFRSPGPGFDAEWYCRRYEDVLDEG 301
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY--------DDLRNV--FGSDRGAA 506
+ H+ FG EGR T + Y +Y D+ +D A
Sbjct: 302 YEP-------LVHYVKFGRAEGRDATPPTPDYTYTYALSDPGPIPDVVPARRPINDHDFA 354
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
+ N D A A + DL+ + + D + + E
Sbjct: 355 LEVPFHYAPD--INMDKPVAAIVHAFYPDLLEHILGYLENIPCAVDLYISTDSAE 407
>gi|150377118|ref|YP_001313714.1| hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
gi|150031665|gb|ABR63781.1| Hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
Length = 574
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 63/406 (15%), Positives = 113/406 (27%), Gaps = 23/406 (5%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----FYYAP 312
N TI + + G GNDV+ GN+ N++ G D +DG +G D Y +P
Sbjct: 155 SGNDTINGSLGNDEIWGRLGNDVLNGNAGNDLVTGGGGADTYDGGAGFDILNFQDAYDSP 214
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + I A V D + + E R + +++
Sbjct: 215 TAIRGINLNATAGTVVDQFGFSE-TFQNFEEFRGTQFSDSMMGSSVDETFFGFGGRDNIN 273
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDS---YLYLGSYDDLRNVFGSDRGAAARHYITH 429
G D + F + G ++G I + GS D L ++ +
Sbjct: 274 GGAGIDTVRYDRDF-QRGATKGVSIDLSTGIATDGFGSRDTLTSIENIRATEFKDTIVGS 332
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
A D + + + G
Sbjct: 333 SAANFLRTFAGNDSINGGGGSDNMRGGIGNDTYFVDNTGDIVDEAADSGAGTDTVQSTVS 392
Query: 490 GSYDDLRNVFGSDRGAAA---RHYITHGVKEGRNP---DAFKALEYIASHEDLINAFADA 543
+ + G + G A ++ + +
Sbjct: 393 FNLGNTAVAKGGVENLVLLGTGNINGTGNALNNTLSGNTGNNTFSGFAGNDTIDGGLGND 452
Query: 544 PDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVF-GSDRSAAAQHYITHGMKEG 602
G D S G + F+ L T+ D N F +D + ++ + G+
Sbjct: 453 LINGGLGND--SLTGGAGLDTFNFSNALDATNNVDTINGFVVADDTIRLENAVFTGIVG- 509
Query: 603 RALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
++ QF + + AD + +D L D GDG
Sbjct: 510 -TGTLTAAQFVTN---TTGLAADADDRIIYDSDTGRLLYDSDGDGA 551
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 62/200 (31%), Gaps = 6/200 (3%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN+ Y ++ + DSG G D + T+ + N + + N+
Sbjct: 361 GNDTYFVDNT---GDIVDEAADSGAGTDTVQSTVSFNLGNTAVAKGGVENLVLLGTGNIN 417
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + ++ G++GN+ G + N+ GND+ +G G D+ A +
Sbjct: 418 GTGNALNNTLSGNTGNNTFSGFAGNDTIDGGLGNDLINGGLGNDSLTGGAGLDTFNFSNA 477
Query: 322 --ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ D +E F + + T D I D
Sbjct: 478 LDATNNVDTINGFVVADDTIRLENAVFTGIVGTGTLTAAQFVTNTTGLAADADDRIIYDS 537
Query: 380 FESMKHFYEFGLSEGRDITF 399
+ G G + F
Sbjct: 538 DTGRLLYDSDGDGAGGSVHF 557
>gi|75909472|ref|YP_323768.1| Ig family protein [Anabaena variabilis ATCC 29413]
gi|75703197|gb|ABA22873.1| Putative Ig [Anabaena variabilis ATCC 29413]
Length = 3209
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/414 (13%), Positives = 109/414 (26%), Gaps = 29/414 (7%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ G + + + I+ + +G L+ G N + +++ G
Sbjct: 2788 VENANEGTDTVRSSISYTLGDNIENLVLTG---TSSLSGTGNTLNNLITGNTGANTLNGK 2844
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ I +++ G SGND + G + N+ +G+DV G +G DT YY S
Sbjct: 2845 AGDDIINGEGGNDTLNGESGNDTLNGGTGNDSLDGGAGDDVMLGGAGDDT--YYTDSSND 2902
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVI 375
+I N + ++E L I+ ++ + + L
Sbjct: 2903 QIIEVFNEGTDTVRSAISWTLGYNLENLILTGSNAINGTGNALKNSITGNTANNTLSGGD 2962
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
D G D L G +D+ +
Sbjct: 2963 NDDTLNGDAGNDILNGDAGND-----SLDGGVGNDVMIGGAGNDTYYTDSI--------- 3008
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
A++ + + ++ G +
Sbjct: 3009 -----NDQIIEATNAGTDTVRSAISWTLSNNLENLILTGSNAINGTGNALVNNMTGNSAN 3063
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
++ G D G + L ++ L+ AG D F
Sbjct: 3064 NSLSGGDNNDTLN--GGDGDDILNGGNGNDTLIGGNGNDTLVGGVGSDKLTGGAGNDKFV 3121
Query: 556 NFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
EG F+ + L F + + G++ G I
Sbjct: 3122 FNSLSEGIDTITDFSSTNDVLVVQSLLASFNYTGTNPIANGYMRGIQSGSNTLI 3175
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/303 (10%), Positives = 78/303 (25%), Gaps = 17/303 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ T + DV G G T + ++ +I
Sbjct: 2852 GEGGNDTLNGESGNDTLNGGTGNDSLDGGAGDDVMLGGAGDDTYYTDSSNDQIIEVFNEG 2911
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G + + + ++ + + + + +
Sbjct: 2912 TDTVRSAISWTLGYNLENLILTGSNAINGTGNALKNSITGNTANNTLSGGDNDDTLNGDA 2971
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-----VKNYIDLNTESW 250
G G+ + G+D I D +
Sbjct: 2972 G-NDILNGD---AGNDSLDGGVGNDVMIGGAGNDTYYTDSINDQIIEATNAGTDTVRSAI 3027
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S I + + G++ + + GNSANN ND +G G D
Sbjct: 3028 SWTLSNNLENLILTGSNAINGTGNALVNNMTGNSANNSLSGGDNNDTLNGGDGDDIL--N 3085
Query: 311 APSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + + K + ++ F +S++ +I +++++ +
Sbjct: 3086 GGNGNDTLIGGNGNDTLVGGVGSDKLTGGAGNDKFVF-----NSLSEGIDTITDFSSTND 3140
Query: 370 DLI 372
L+
Sbjct: 3141 VLV 3143
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/298 (14%), Positives = 85/298 (28%), Gaps = 48/298 (16%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D T + I E+ + R A+ W+ + E + + N +
Sbjct: 2893 DTYYTDSSNDQIIEVFNEGTDTVRSAI-SWT--LGYNLENLILTGSNAINGTGNALKNSI 2949
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ D D G + + +G G Y D
Sbjct: 2950 TGNTANNTLSGGDNDDTLNGDAGNDILNGDAGNDSLDGGVGNDVMIGGAGNDTYY---TD 3006
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
ND + + + S + + +S+ + + G+ + N +
Sbjct: 3007 SINDQIIEATNAGTDTVRSAISWT--------LSNNLENLILTGSNAINGTGNALVNNMT 3058
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ +S+ G + N T+ + +
Sbjct: 3059 ---------------------------------GNSANNSLSGGDNNDTLNGGDGDDILN 3085
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA-PSYLYKIYRFENAIIVYD 329
G +GND +IG + N+ G+D G +G D F + + + I F + V
Sbjct: 3086 GGNGNDTLIGGNGNDTLVGGVGSDKLTGGAGNDKFVFNSLSEGIDTITDFSSTNDVLV 3143
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/265 (12%), Positives = 71/265 (26%), Gaps = 34/265 (12%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
++ D + G+D+L + ++
Sbjct: 1259 DDTAGNLNLTIDPTITYAVTGGKGNDILTILASSTTGGILN------------------- 1299
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G +G+D + G +++ G DV +G DT A + +
Sbjct: 1300 ---------GGAGDDTLTGAGGSDIINGGKGKDVIKAGAGDDTITVDADDIITSLDGGAG 1350
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV-IGQDVFES 382
IV + + L+ ++ + K + + Y LI +G D+
Sbjct: 1351 FDIVTIDLDSRLHL-----ILKDSNNVEAIIGTKISNQITYIGVKPVLISGDLGNDILTG 1405
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ + EG+D + + L + + Y G D
Sbjct: 1406 GEGDDQIEGGEGKDKLYGNKGKDLLLGGLDDDSLYGEQNDDQLYGQEGDDFLDGGDGNDI 1465
Query: 443 LEYIASHEDLINAFADAPDLVQVGK 467
L ++ L + G
Sbjct: 1466 LNGGIGNDSLKGGSGQNTYIFGRGY 1490
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 88/291 (30%), Gaps = 58/291 (19%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ G + + S + + +L L + + + + S
Sbjct: 1754 VENYNTGTDTLSFKTGINPSDITFWRKSNSYPESDNLYLAIKNTHDQIIIEDQFRSGPYG 1813
Query: 257 EKNMTIAQHTV--IESVVG-----SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
A T+ E++ ++G+D ++G +N+ +GND+ +G G +T+ +
Sbjct: 1814 IDQFVFANGTIWTRENIQTWLLQSTTGDDYLLGYQSNDTLDGGAGNDLLNGGYGNNTYIF 1873
Query: 310 YAPSYLYKIYRFENAIIVYDA-----------------NEHKQDFL-------------- 338
+ I N + + +QD L
Sbjct: 1874 GRGYAVDTIVENYNTGTDTVSFKAGISKSDVVFWRKSNSSTEQDNLYLAIKNTNDRLIIE 1933
Query: 339 -------SDVERLRFADQCIDS----------VNVKQRSILEYTASYEDLIQVIGQDVFE 381
+++ FAD + N+ + +++ A+ L G D
Sbjct: 1934 DQFRSGPYGIDQFIFADGTTITRSEINSMSLPNNLPEDNLVTGDANANTLENATGNDTLA 1993
Query: 382 SMKHFYEFGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ + G+DI + Y L SY D FG+ + G
Sbjct: 1994 GGIGNDTYIFKQGYGQDIIQEGYSGLNSYYDTVK-FGAGLTTNTMEIVRQG 2043
Score = 41.3 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 31/217 (14%), Positives = 56/217 (25%), Gaps = 56/217 (25%)
Query: 271 VVGSSGNDVVIGNSA---NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA--- 324
+ + G+D ++G S N++ GND G +G DT+ + I +
Sbjct: 2224 LKSTPGDDYLVGYSWGIRNDILDGGLGNDTLVGGTGDDTYIFKQGYGQDIIQEDYSGLNS 2283
Query: 325 --IIVYDANE----------HKQDFL----------------------SDVERLRFADQC 350
V D + +E +F +
Sbjct: 2284 YYDTVKFGAGLTIQTMEIVREGNDLVFKVKGSSDRLTIKNQFDYPFEAISIEEFQFDNGA 2343
Query: 351 ID----------SVNVKQRSILEY---TASYEDLIQVIGQDVFESMKHFYEFGLSE--GR 395
+ + + E L +G D + + G+
Sbjct: 2344 TIWTKENIKQYLLKSTSADDYIVGYSEGINNETLDGGLGNDTLVGGTGNDTYIFKQGYGQ 2403
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
DI + Y SY D FG+ + G
Sbjct: 2404 DIIQEGYSGFNSYYDTVK-FGAGLTTNTMEIVRQGND 2439
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 36/136 (26%), Gaps = 5/136 (3%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+I L + + +++ +S N + G +V ND
Sbjct: 865 TNKIEFIRLGNNQEYFLDNSSGQWQLKATNNVQTA--TSSNTTIQGTIGADVLRGLGEND 922
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAII--VYDANEHKQDFLSD-VERLRFADQCIDS 353
G +G DT+ Y L V D ++ + L+ D+ +
Sbjct: 923 TLLGGAGNDTYLYSFGDGLNTTIYDTGDYEGKVRDGGIDTLVLGTNTIHSLKLQDKDLII 982
Query: 354 VNVKQRSILEYTASYE 369
+
Sbjct: 983 TVSYILPGFNASGGNN 998
Score = 40.2 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 39/300 (13%), Positives = 75/300 (25%), Gaps = 59/300 (19%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE--- 291
+ G + N I E I G E + + + ++G +D + G ++ +
Sbjct: 1394 ISGDLGNDILTGGEGDDQIEGGEGKDKLYGNKGKDLLLGGLDDDSLYGEQNDDQLYGQEG 1453
Query: 292 ------SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS------ 339
GND+ +G G D+ + Y R + N +D +S
Sbjct: 1454 DDFLDGGDGNDILNGGIGNDSLKGGSGQNTYIFGRGYGIDTITQNNNADKDIISFKAGIS 1513
Query: 340 -----------------------------------------DVERLRFADQCIDSVNVKQ 358
+++ FAD I + Q
Sbjct: 1514 PSDITFWRRSNNDSEKNNLYLAIKNTHDRLIITDQLVNNAYGIDQFTFADGTIWTRENIQ 1573
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+L+ T + L+ D + G + Y + G+D
Sbjct: 1574 AWLLQSTTGDDYLVGYQSNDTLDGGAGNDLLNGGAGNNTYVFGRGYGIDTIAENSNTGTD 1633
Query: 419 RGAAARHYI---THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ ++ + L + D G D F
Sbjct: 1634 TLSFKAGINPSDITFWRKSSSYPESDNLYLAIKNTHDQIIIEDQFRSGPYGIDQFVFANG 1693
>gi|294789235|ref|ZP_06754474.1| extracellular metalloprotease [Simonsiella muelleri ATCC 29453]
gi|294482976|gb|EFG30664.1| extracellular metalloprotease [Simonsiella muelleri ATCC 29453]
Length = 839
Score = 106 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 77/427 (18%), Positives = 126/427 (29%), Gaps = 108/427 (25%)
Query: 47 LNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYV---------CTPRYDSR 97
++ + Q V R AL SK ++TF E + N + +
Sbjct: 416 MSADNQAVIRQALDLISKYTNITFREVDSVQESDLDFYLNDFAALGMDGSLGYAYFGGNA 475
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
+F +F ++ +HEI H +GL HP P E +S
Sbjct: 476 HFNSNDFGGNYSFKQPANDNNKGLFTVIHEILHTVGLKHPH-LEEKEPNTTPHLSDEKNS 534
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIE-VQQKD 215
+VMSY F + P + D+ + +YG K +N Y
Sbjct: 535 TGVTVMSYKADD-------FERVSEPHIYDLAILHYLYGVNPKARAEDNTYTFHMFNPSS 587
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM--------------- 260
+ I+D G D D + N +DL SW N
Sbjct: 588 NDGDIYIWDGAGVDTFDASQEAKGVN-VDLTPGSWIYADASNTNTRDFGLINTHGIDYDS 646
Query: 261 ----------------------------TIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
I +T IE+++GS+ ND++ GN+A+N+ +
Sbjct: 647 YFSGGNKEAGTSAGSSGVFAYNYTDGVSFIGYNTQIENLLGSAHNDILKGNAADNIIQGN 706
Query: 293 SGND------------------------------------VFDGSSGLDTFFYYAPSYLY 316
GND G +G DTF +
Sbjct: 707 DGNDQIYGNAGNDTLIGGIGNDTLDGGDGDDVLMGGLGLDTLTGGAGADTFVFNN----- 761
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + + I + K L + +D D + Q + SY+ G
Sbjct: 762 -VPDYADKITDFTVGTDKIALLKGIFA---SDTLTDFAHHIQYNAQTGALSYDADGAGSG 817
Query: 377 QDVFESM 383
V +
Sbjct: 818 AAVQIAT 824
>gi|288961983|ref|YP_003452293.1| hemolysin-type calcium-binding region [Azospirillum sp. B510]
gi|288914263|dbj|BAI75749.1| hemolysin-type calcium-binding region [Azospirillum sp. B510]
Length = 5519
Score = 106 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/422 (12%), Positives = 110/422 (26%), Gaps = 36/422 (8%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITE-----------LNPNAQEVARWALGE 61
L + + + IT + A++ A+
Sbjct: 2542 AGAMLNAGTHVTETDGTTSWTLTAAQLTGLTITPKHDSDVDFTLTVTATAKDGVAAAV-S 2600
Query: 62 WSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+ +T + + + D G G TI
Sbjct: 2601 VQTTLAVTVVAVADTPTVSVSPVTYDLAV-----GQNDTLTGTAGNDTLSGGAGNDTIFG 2655
Query: 122 HNALHEI-GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
I G G G ++Y + +T V + +A +
Sbjct: 2656 GGGDDVIYGDGTGTFVTGLAITPSLSDIDGSEYISKVTITGVPTGASLSAGTQNADGSWT 2715
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
P +A+ G + + ++++ + L ++
Sbjct: 2716 LDPAQLAGLALTAKEGDTSHPITLTVVATSTERENGSSADSP-----PKTLTISFTN--- 2767
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ S+ G + N T+ ++++G G+D + G + N++ GND DG
Sbjct: 2768 -----TPKGNDSLDGGDGNDTLYGGAGNDTLIGGLGDDSLDGGADNDLLAGGPGNDTIDG 2822
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+G DT Y + D L ++E + + +
Sbjct: 2823 GAGNDTVTYANSATAVNANLATG-----VGTGEGTDVLRNLENVTGSAFDDVITGDGGAN 2877
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
IL + + G D + G D + L D + F
Sbjct: 2878 ILLGGGGKDTITGGGGVDTIHGGDGDDLSIFTVGTDGGTSANPELQDGDAGIDTFRVMLT 2937
Query: 421 AA 422
+A
Sbjct: 2938 SA 2939
Score = 40.2 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 24/201 (11%), Positives = 39/201 (19%), Gaps = 13/201 (6%)
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR--NVFGSDRGAAARH 425
+ L G D G D+ + ++ D
Sbjct: 2632 NDTLTGTAGNDTLSGGAGNDTIFGGGGDDVIYGDGTGTFVTGLAITPSLSDIDGSEYISK 2691
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
GV G + A + D A + H +
Sbjct: 2692 VTITGVPTGASLSAGTQNADGSWTLDPAQLAGLALTAKEGDTSHPITLTVV--------A 2743
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
+ + + G D L A ++ LI D
Sbjct: 2744 TSTERENGSSADSPPKTLTISFTN-TPKGNDSLDGGDGNDTLYGGAGNDTLIGGLGDDSL 2802
Query: 546 LVQAGKDHFSNFGYEEGRSIT 566
A D G +I
Sbjct: 2803 DGGADND--LLAGGPGNDTID 2821
>gi|260576676|ref|ZP_05844663.1| Furin [Rhodobacter sp. SW2]
gi|259021161|gb|EEW24470.1| Furin [Rhodobacter sp. SW2]
Length = 1073
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 68/474 (14%), Positives = 118/474 (24%), Gaps = 38/474 (8%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY----IDLNTESWS 251
G G + ++ GDD+ + + ID S S
Sbjct: 594 GGDDTLTGGT---GNDTLNAGTGVDSLSGGVGDDVYVIDGSDIIDEDVGGGIDRVASSAS 650
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
T + +G++ N+V+ GNS N +G D G G D +
Sbjct: 651 YQLAANVEYLTLTGTAALTGIGNALNNVLNGNSGANTLNGITGTDTMSGGMGDDVYV--- 707
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYED 370
I A + ++VE L I+ +++ +
Sbjct: 708 TDGGDIISELAAAGTDRVMSSAGHSLSANVENLTLTGAASINGYGNSLNNLIYGNSGNNV 767
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L G D G D+ G G+DR + Y
Sbjct: 768 LGGGNGNDTMNGTTGTDTLIGGLGDDVYTTD---GGDILTEAAAAGTDRVYSTASYGLSV 824
Query: 431 VKEGRN--PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
E A + + A+ G D + + +Y
Sbjct: 825 NLENLTLIGGAAINGYGNTLNNIMTGNGANNVLGGGNGNDTLNGTTGADTLIGGLGDDVY 884
Query: 489 LGSYDDL---RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI-----------ASHE 534
D G+D + E A+ + +
Sbjct: 885 TTDGGDTLTEAAAAGTDSVFTSASLSLSANLENLTLTGAAAINGYGNVLANSLTGNSGNN 944
Query: 535 DLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
L + AG D + G + FN L T+ D + + D + ++
Sbjct: 945 VLGGGDGNDTLNGAAGTD--TLTGGTGADTFIFNTALGATNIDRITDFSVVDDTIRLENA 1002
Query: 595 ITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
I G+ G + A + ++ L D G G
Sbjct: 1003 IFTGLANGALAV------SAFAANLTGLATDALDRIIYETDTGRLMFDADGSGA 1050
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 51/359 (14%), Positives = 100/359 (27%), Gaps = 38/359 (10%)
Query: 201 SLGNNIYKIEVQQKDSPFIQ-----TIYDSGGDDLLDLTLIGGVKN--------YIDLNT 247
S N+ Y + D + + +GG D ++ + +ID
Sbjct: 495 SSANDRYVFTNEYSDYAGLFGHVQAVVDANGGVDTVNAAAVSSASVIYLNGVSGFIDGTD 554
Query: 248 ESWSSIG---GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
S+S+I G + I + + G GND++ G ++ +GND + +G+
Sbjct: 555 VSFSNIENAIGGDGGDQIFGSDIANQLFGMRGNDMLNGLGGDDTLTGGTGNDTLNAGTGV 614
Query: 305 DTFFYYAPSYLYKIYRFE------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
D+ +Y I + I A+ ++VE L +
Sbjct: 615 DSLSGGVGDDVYVIDGSDIIDEDVGGGIDRVASSASYQLAANVEYLTLTGTAALTGI--- 671
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
A L G + + G D+ G G+D
Sbjct: 672 -----GNALNNVLNGNSGANTLNGITGTDTMSGGMGDDVYVTD---GGDIISELAAAGTD 723
Query: 419 RGAAARHYITHGVKEGRNPDAFKA--LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
R ++ + E + + + + + G D +
Sbjct: 724 RVMSSAGHSLSANVENLTLTGAASINGYGNSLNNLIYGNSGNNVLGGGNGNDTMNGTTGT 783
Query: 477 EGRFVTFDSYLYLGSYDDL---RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
+ +Y D+ G+DR + Y E A+ +
Sbjct: 784 DTLIGGLGDDVYTTDGGDILTEAAAAGTDRVYSTASYGLSVNLENLTLIGGAAINGYGN 842
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 47/341 (13%), Positives = 91/341 (26%), Gaps = 32/341 (9%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
+ L ++ D + I+EL + + G S ++ E
Sbjct: 684 GANTLNGITGTDTMSGGMGDDVYVTDGGDIISELAAAGTDRVMSSAGH-SLSANV--ENL 740
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
++ N +S + + D G T++
Sbjct: 741 TLTGAASINGYGNSLNNLIYGNSGNNVLGGGNGNDTMNGTTGTDTLIGGLGDDV------ 794
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
Y + + S SY + + G A + +
Sbjct: 795 ------YTTDGGDILTEAAAAGTDRVYSTASYGLSVNLENLTLIGGAAINGYGNTLNNIM 848
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTE 248
+ + T+ GDD+ + T
Sbjct: 849 T--GNGANNVLGGGNGNDTLNGTTGADTLIGGLGDDVYTTDGGDTLTEAAAAGTDSVFTS 906
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS------- 301
+ S+ +N+T+ I + G+ + + GNS NNV GND +G+
Sbjct: 907 ASLSLSANLENLTLTGAAAI-NGYGNVLANSLTGNSGNNVLGGGDGNDTLNGAAGTDTLT 965
Query: 302 --SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G DTF + I R + +V D + +
Sbjct: 966 GGTGADTFIFNTALGATNIDRITDFSVVDDTIRLENAIFTG 1006
>gi|332561196|ref|ZP_08415514.1| putative outer membrane adhesin like proteiin [Rhodobacter
sphaeroides WS8N]
gi|332274994|gb|EGJ20310.1| putative outer membrane adhesin like proteiin [Rhodobacter
sphaeroides WS8N]
Length = 2633
Score = 105 bits (262), Expect = 3e-20, Method: Composition-based stats.
Identities = 54/417 (12%), Positives = 109/417 (26%), Gaps = 26/417 (6%)
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI---EV 211
ND+ + + + + D +G + ++G G+++
Sbjct: 2107 NDTLMGGAGNDSLYGNGDDDRLYGNEGNDSLYGEEGNDWLHGGQ----GDDLVVGGDGND 2162
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM------TIAQH 265
T+ G+D + + E N +
Sbjct: 2163 TLAGGLGNDTLQGGAGNDTASYETATEGVTVSLVLQGEGQFVNAQEGNDLLTSIENLTGS 2222
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++++G G++V+ G + N+V +GND G +G D Y A + + +
Sbjct: 2223 NHGDTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATGGVTVNLARDGQ 2282
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ D LS +E + + +I+ + G D
Sbjct: 2283 AQNIGADQGTDVLSSIEGVIGSAFNDILSGSAVANIIFGGDGADLATGGAGNDTILGGAG 2342
Query: 386 FYEFGLSEGRDITFDSYL-----YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ G D+ F D + FG D A +G + F
Sbjct: 2343 SDSLYGNLGDDLLFGDVGNDWIHGGQGNDTVLGGFGDDTLAGGVGDDVVDGGDGIDTVEF 2402
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSN-----FGCEEGRFVTFDSYLYLGSYDDL 495
+ + DL + G D + + R + +
Sbjct: 2403 QTATAGVTV-DLSLQGQAQRISAEEGMDTLFSIENILGSRYDDRLLGDAGSNLIDGSAGN 2461
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G + G L ++ L + + AG D
Sbjct: 2462 DTAMGQAGEDLI--FGGDGNDSLYGNQDNDTLVGGNGNDWLHGGQGNDLLVGDAGSD 2516
Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/300 (15%), Positives = 91/300 (30%), Gaps = 8/300 (2%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + + S G D++ + GG N + G E N ++
Sbjct: 2082 NLEGTDGADLLIGSRGADVISGRMFNDTLMGGAGNDSLYGNGDDDRLYGNEGNDSLYGEE 2141
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G G+D+V+G N+ GND G +G DT Y + +
Sbjct: 2142 GNDWLHGGQGDDLVVGGDGNDTLAGGLGNDTLQGGAGNDTASYETATEGVTVSLVLQGEG 2201
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ + D L+ +E L ++ + + ++L A + L+ G D
Sbjct: 2202 QFVNAQEGNDLLTSIENLTGSNHGDTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGN 2261
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
+ + G ++ G+D ++ I + + A + +
Sbjct: 2262 DIADYAAATGGVTVNLARDGQAQNIGADQGTDVLSSIEGVIGSAFNDILSGSAVANIIFG 2321
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF---VTFDSYLYLGSYDDLRNVFGSDR 503
DL A ++ + V D D + FG D
Sbjct: 2322 GDGADLATGGAGNDTILGGAGSDSLYGNLGDDLLFGDVGNDWIHGGQGNDTVLGGFGDDT 2381
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/261 (16%), Positives = 78/261 (29%), Gaps = 9/261 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
S I S + + D G G ++ + + +G
Sbjct: 2303 GSAFNDILSGSAVANIIFGGDGADLATGGAGNDTILGGAGSDSLYGNLGDDLLFGDVGND 2362
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G V G D D+ V + +D AT V+ +++Q
Sbjct: 2363 WIHGGQGNDTVLGGFGD---DTLAGGVGDDVVDGGDGIDTVEFQTATAGVTVDLSLQGQA 2419
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + S + + G +L+D G N + I G
Sbjct: 2420 QRISAEEGMDTLFSIENILGSRYDDRLLGDAGSNLID----GSAGNDTAMGQAGEDLIFG 2475
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N ++ + +++VG +GND + G N++ +G+D +G G D
Sbjct: 2476 GDGNDSLYGNQDNDTLVGGNGNDWLHGGQGNDLLVGDAGSDTLNGGVGDDVLV--GGQGF 2533
Query: 316 YKIYRFENAIIVYDANEHKQD 336
+ A + D
Sbjct: 2534 DLLTGGTGADTFVFGSLDSAD 2554
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 51/426 (11%), Positives = 111/426 (26%), Gaps = 85/426 (19%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
F +T + NG + + D G G ++ + +
Sbjct: 2106 FNDTLMGGAGNDSLYGNGDDDRLYGNEGNDSLYGEEGNDWLHGGQGDDLVVGGDGNDTLA 2165
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
LG + ND+ + + ++ + +D++
Sbjct: 2166 GGLG------------NDTLQGGAGNDTASYETATEGVTVSLVLQGEGQFVNAQEGNDLL 2213
Query: 190 -AVQKIYGAPKGSL-----GNNIYK---IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+++ + G+ G G+N+ T+ G+D+ D G
Sbjct: 2214 TSIENLTGSNHGDTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATGGV 2273
Query: 241 NY------------------------------------------IDLNTESWSSIGGYEK 258
I + G
Sbjct: 2274 TVNLARDGQAQNIGADQGTDVLSSIEGVIGSAFNDILSGSAVANIIFGGDGADLATGGAG 2333
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL-------------- 304
N TI +S+ G+ G+D++ G+ N+ GND G G
Sbjct: 2334 NDTILGGAGSDSLYGNLGDDLLFGDVGNDWIHGGQGNDTVLGGFGDDTLAGGVGDDVVDG 2393
Query: 305 ----DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
DT + + + + E D L +E + + + +
Sbjct: 2394 GDGIDTVEFQTATAGVTVDLSLQGQAQRISAEEGMDTLFSIENILGSRYDDRLLGDAGSN 2453
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----TFDSYLYLGSYDDLRNVFG 416
+++ +A + + G+D+ ++ D + +L+ G +DL
Sbjct: 2454 LIDGSAGNDTAMGQAGEDLIFGGDGNDSLYGNQDNDTLVGGNGNDWLHGGQGNDLLVGDA 2513
Query: 417 SDRGAA 422
Sbjct: 2514 GSDTLN 2519
Score = 42.1 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 79/300 (26%), Gaps = 32/300 (10%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
L D + + ++ + L+ G D +EG D
Sbjct: 2082 NLEGTDGADLLIGSRGADVISGRMFNDTLMGGAGNDSLYGNGDDDRLYGNEGND-----S 2136
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
LY +D + D D L ++ L +
Sbjct: 2137 LYGEEGNDWLHGGQGDDLV-------------VGGDGNDTLAGGLGNDTLQGGAGNDTAS 2183
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
+ + + +G ++ +DL + G+ H T EG N
Sbjct: 2184 YETATEGVTVSLVLQGEGQFVNA----QEGNDLLTSIENLTGSN--HGDTLIGDEGDNV- 2236
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNV 582
L +A ++ L+ + L AG D G ++ D + +
Sbjct: 2237 ----LSGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATGGVTVNLARDGQAQN---IGAD 2289
Query: 583 FGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTD 642
G+D ++ + I + + + + ++ LY +
Sbjct: 2290 QGTDVLSSIEGVIGSAFNDILSGSAVANIIFGGDGADLATGGAGNDTILGGAGSDSLYGN 2349
>gi|320101679|ref|YP_004177270.1| hypothetical protein Isop_0124 [Isosphaera pallida ATCC 43644]
gi|319748961|gb|ADV60721.1| hypothetical protein Isop_0124 [Isosphaera pallida ATCC 43644]
Length = 2205
Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/419 (12%), Positives = 99/419 (23%), Gaps = 44/419 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + + D G G T+L + + G
Sbjct: 1668 PAGGVSLLGGD-----------GNDLLQGGAGDDSLLGGDGNDTLLGGDGNDLLQGGAGD 1716
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G ++G +D ++ D + D + ++ +
Sbjct: 1717 DSLLGGDGNDTLWGGLVGETSDLTNDTLR-GGAGNDQLHGTRGDNLLDGGPGDDL-IRGV 1774
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLNTESWSS 252
G G+ TI G+DL+ D + L
Sbjct: 1775 AGRNTLLGGD----GNDTLLGGVGSDTIEGGDGNDLILGDADINLATGRLFTLEAGGADF 1830
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVV-------------IGNSANNVFFESSGNDVFD 299
+ G + N T+ +++ G GND++ ++ GND
Sbjct: 1831 LDGGDGNDTLNGGGGNDTLFGGGGNDLLGVVTLPASLGGAVFDEPGRDLLDGGDGNDTIR 1890
Query: 300 GSSGLDTF-----FYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCI 351
G G DT + + D + S + L D
Sbjct: 1891 GGPGDDTLNGGGGDDFLDGGAGDDLLDGGDGNDTLSGGAGNDTIRGGSGNDLLFGRDGDD 1950
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGS 407
+L + L G D G D+ F + L+ G+
Sbjct: 1951 LLDGGTGDDLLFGGNGNDTLFGGAGNDTLSGGAGNDLLRGGAGNDLLFGNEGNDTLFGGA 2010
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
DD D I + +A + D +
Sbjct: 2011 GDDTLQGGAGDDLLVGGEAIRPVGARVAPGQPSDGNDVLAGGDGRDTLHGGTGDNIMDA 2069
Score = 96.0 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/360 (13%), Positives = 93/360 (25%), Gaps = 32/360 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV- 267
+ ++ G+D L +GG N + S+ G + N T+ V
Sbjct: 1679 GNDLLQGGAGDDSLLGGDGNDTL----LGGDGNDLLQGGAGDDSLLGGDGNDTLWGGLVG 1734
Query: 268 ------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+++ G +GND + G +N+ G+D+ G +G +T +
Sbjct: 1735 ETSDLTNDTLRGGAGNDQLHGTRGDNLLDGGPGDDLIRGVAGRNTLL--GGDGNDTLLGG 1792
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + D + + A + ++ L+ + L G D
Sbjct: 1793 VGSDTI--EGGDGNDLILGDADINLATGRLFTLEAGGADFLDGGDGNDTLNGGGGNDTLF 1850
Query: 382 SMKHFY---------EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G + + D D +R G D
Sbjct: 1851 GGGGNDLLGVVTLPASLGGAVFDEPGRDLLDGGDGNDTIRGGPGDDTLNGGGG-----DD 1905
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
L+ ++ L + G D ++ L G
Sbjct: 1906 FLDGGAGDDLLDGGDGNDTLSGGAGNDTIRGGSGNDLLFGRDGDDLLDGGTGDDLLFGGN 1965
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G+ + G R L ++ L D AG D
Sbjct: 1966 GNDTLFGGAGNDTLS---GGAGNDLLRGGAGNDLLFGNEGNDTLFGGAGDDTLQGGAGDD 2022
Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/364 (13%), Positives = 88/364 (24%), Gaps = 28/364 (7%)
Query: 211 VQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
S ++ I+D G G+D L + + S+ G + N + +
Sbjct: 1637 TDSPASLALRLIFDGGDGNDTLGF------ADPVPPGPAGGVSLLGGDGNDLLQGGAGDD 1690
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S++G GND ++G N++ +G+D G G DT + + +
Sbjct: 1691 SLLGGDGNDTLLGGDGNDLLQGGAGDDSLLGGDGNDTLWGG------LVGETSDLTNDTL 1744
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D L ++ A L+ G D
Sbjct: 1745 RGGAGNDQLHG------TRGDNLLDGGPGDDLIRGVAGRNTLLGGDGNDTLLGGVGSDTI 1798
Query: 390 GLSEGRDITFDSYLY---LGSYDDLRNVFGS--DRGAAARHYITHGVKEGRNPDAFKALE 444
+G D+ G L D G G + L
Sbjct: 1799 EGGDGNDLILGDADINLATGRLFTLEAGGADFLDGGDGNDTLNGGGGNDTLFGGGGNDLL 1858
Query: 445 YIASHEDLINA--FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ + + F + + G D G +
Sbjct: 1859 GVVTLPASLGGAVFDEPGRDLLDGGDGNDTIRGGPGDDTLNGGGGDDFLDGGAGDDLLDG 1918
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
G R L + L D G D + FG
Sbjct: 1919 GDGNDTLSGGAGNDTIRGGSGNDLLFGRDGDDLLDGGTGDDLLFGGNGND--TLFGGAGN 1976
Query: 563 RSIT 566
+++
Sbjct: 1977 DTLS 1980
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/423 (12%), Positives = 98/423 (23%), Gaps = 36/423 (8%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
G + + T + + A I V G
Sbjct: 1331 EGTEGDDTATATANSITVAGQTVSFVNPVESIEINLLGGNDQADLSAFAIQGVTLNGGDG 1390
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+L + ++ G+D LD + ++ G
Sbjct: 1391 SDTLRGT--NFADRINGDAGDDLVFGLAGNDTLD-------------GGDGNDTLDGGAG 1435
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + +S++G SG+D + G ++ SG ++ DG +G D + + + +
Sbjct: 1436 DDLLHGGIGNDSLLGDSGDDTLEGGDGDDTLEGGSGRNLLDGGAGDDLLVHRLDANGFDL 1495
Query: 319 -YRFENAIIVYDANEHKQDFLS--------DVERLRFADQCIDSVNVKQRSILEYTASYE 369
V D + + L +
Sbjct: 1496 MTGGPGNDTVSVLGTAGGDSFQLAPLTNQPGRFSVAANGADRLEGGTVEVVALNGGVGDD 1555
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ D+ + + G D + + DD V G
Sbjct: 1556 RFVVA---DLAATGLQRVDLEGGAGNDA---FTIQGTNGDDAILVSRPSVGGPVEVAGLA 1609
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+ +P F E L+ D G + + F +
Sbjct: 1610 ALARVIDPAGFTETL---RVEGLVGNDLILTDSPASLALRLIFDGGDGNDTLGFADPVPP 1666
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
G + + G G D L ++ L D L
Sbjct: 1667 GPAGGVSLLGGDGNDLLQ---GGAGDDSLLGGDGNDTLLGGDGNDLLQGGAGDDSLLGGD 1723
Query: 550 GKD 552
G D
Sbjct: 1724 GND 1726
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 82/279 (29%), Gaps = 29/279 (10%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL---- 132
+ + + G D G G + +G A+
Sbjct: 1816 ATGRLFTLEAGGADFLDGGDGNDTLNGGGGNDTLFGGGGNDLLGVVTLPASLGGAVFDEP 1875
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G +G + G D + D ++D G + ++
Sbjct: 1876 GRDLLDGGDGNDTIRGGPGDDTLNGGGGDDFLDGGAGDDLLDGGDGNDTLSGGAGNDTIR 1935
Query: 193 KIYGAP--KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
G G G+++ + T++ G+D L GG N +
Sbjct: 1936 GGSGNDLLFGRDGDDLLDGGTGDDLLFGGNGNDTLFGGAGNDTL----SGGAGNDLLRGG 1991
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI----------------GNSANNVFFE 291
+ G E N T+ +++ G +G+D+++ + N+V
Sbjct: 1992 AGNDLLFGNEGNDTLFGGAGDDTLQGGAGDDLLVGGEAIRPVGARVAPGQPSDGNDVLAG 2051
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G D G +G + S+ +++ + ++++
Sbjct: 2052 GDGRDTLHGGTGDNIMDAGLDSFRERMFASQGRHVIFNR 2090
>gi|254501672|ref|ZP_05113823.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
gi|222437743|gb|EEE44422.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
Length = 2061
Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats.
Identities = 66/307 (21%), Positives = 113/307 (36%), Gaps = 32/307 (10%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
G +NY+ + +S I E + + ++V ++GND + G + +++ F
Sbjct: 1751 TINGGSGQNYV-MGDDSAQIIVLGEGDDQLFGGAGDDTVGSTTGNDQIFGEAGDDLLFGG 1809
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+GND+ +G + D Y S + + DA D L+ VE + F +
Sbjct: 1810 AGNDLLNGGANRDAALYGVTSDGVTLSGTRGTVTAVDAG--GTDTLTGVELVVFTGENTT 1867
Query: 353 ---------------SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR-- 395
+ A + V +H+ FG EGR
Sbjct: 1868 GKDRVTVLLQDNAPVAGQYGFNEAAYLGAHQDVAAAVAAGIFASGAEHYALFGQGEGRVV 1927
Query: 396 DITFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
D+ FD+ YL D+ +A+ HY HG E R+ + F Y+ +ED+
Sbjct: 1928 DLLFDAQFYLADNPDVAAAVTEGIFASASEHYQLHGYAENRSLNPLFDGEYYLTQNEDVA 1987
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
NA HF +G +EGR + FD+ Y +A H++
Sbjct: 1988 NAVGSGGLD--SAYHHFVLYGDQEGRAASRFFDTAAYREEQG------LGSDESALEHFL 2039
Query: 512 THGVKEG 518
G+ +G
Sbjct: 2040 LVGLPQG 2046
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 56/295 (18%), Positives = 91/295 (30%), Gaps = 19/295 (6%)
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + EN E + S + D V + L A + + G
Sbjct: 1734 TVIQLENIEFATIIGEATINGGSGQNYVMGDDSAQIIVLGEGDDQLFGGAGDDTVGSTTG 1793
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D G D+ T G +
Sbjct: 1794 NDQIFGEAGDDLLFGGAGNDLLNGGANRD-------AALYGVTSDGVTLSGTRGTVTAVD 1846
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
L + + F + F+ YLG++ D+
Sbjct: 1847 AGGTDTLTGVE-----LVVFTGENTTGKDRVTVLLQDNAPVAGQYGFNEAAYLGAHQDVA 1901
Query: 497 NVFGSDR-GAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ + A HY G EGR D F A Y+A + D+ A + + +H+
Sbjct: 1902 AAVAAGIFASGAEHYALFGQGEGRVVDLLFDAQFYLADNPDVAAAV--TEGIFASASEHY 1959
Query: 555 SNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEGRALG 606
GY E RS+ F+ + YLT +D+ N GS +A H++ +G +EGRA
Sbjct: 1960 QLHGYAENRSLNPLFDGEYYLTQNEDVANAVGSGGLDSAYHHFVLYGDQEGRAAS 2014
>gi|189424584|ref|YP_001951761.1| glycosyl transferase family 2 [Geobacter lovleyi SZ]
gi|189420843|gb|ACD95241.1| glycosyl transferase family 2 [Geobacter lovleyi SZ]
Length = 857
Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/220 (25%), Positives = 83/220 (37%), Gaps = 39/220 (17%)
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHED 451
EG + FDS YL +Y ++ HY+ HGV +P F Y+ + D
Sbjct: 78 EG-SVLFDSAFYLHNYPEIALA----GMDPVIHYLEHGVSGYYDPHPLFSTRWYLKLYPD 132
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ + + HF FG E R FD LY+ Y D+ N + H
Sbjct: 133 VAASGINPLL-------HFIEFGAREFRVPHPLFDPCLYVSQYPDVFNSGMN----LLEH 181
Query: 510 YITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-- 566
Y+ G EGR P F A Y+ + ++ + +H+ +G S+
Sbjct: 182 YVRFGGDEGRRPHWLFHAQAYLEHYPEIRGS-------GMTPLEHYCRYGRG---SVYQV 231
Query: 567 ---FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
FNP YL+ Y D+ HY+ G EGR
Sbjct: 232 HQLFNPVFYLSRYVDVL----EQSDNPLIHYLVTGADEGR 267
Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 92/248 (37%), Gaps = 38/248 (15%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLR 412
Y +Y + I + G D H+ E G+S D F + YL Y D+
Sbjct: 79 GSVLFDSAFYLHNYPE-IALAGMDPVI---HYLEHGVSGYYDPHPLFSTRWYLKLYPDVA 134
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
H+I G +E R P F Y++ + D+ N+ + +H+
Sbjct: 135 AS----GINPLLHFIEFGAREFRVPHPLFDPCLYVSQYPDVFNSGMN-------LLEHYV 183
Query: 472 NFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALE 528
FG +EGR F + YL Y ++R + HY +G F +
Sbjct: 184 RFGGDEGRRPHWLFHAQAYLEHYPEIRGSGMT----PLEHYCRYGRGSVYQVHQLFNPVF 239
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSD 586
Y++ + D++ +D P + H+ G +EGR + F+ + Y + DL
Sbjct: 240 YLSRYVDVLEQ-SDNPLI------HYLVTGADEGRDPSSTFSTESYRKQFPDLKRA---- 288
Query: 587 RSAAAQHY 594
H+
Sbjct: 289 GINPLVHF 296
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 13/83 (15%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE--GRSITFNPDLYLTSYDDLWN 581
F + Y+ ++ ++ A P + H+ G F+ YL Y D+
Sbjct: 83 FDSAFYLHNYPEIALA-GMDPVI------HYLEHGVSGYYDPHPLFSTRWYLKLYPDV-- 133
Query: 582 VFGSDRSAAAQHYITHGMKEGRA 604
+ H+I G +E R
Sbjct: 134 --AASGINPLLHFIEFGAREFRV 154
>gi|323139972|ref|ZP_08074990.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
gi|322394772|gb|EFX97355.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
Length = 984
Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats.
Identities = 54/308 (17%), Positives = 97/308 (31%), Gaps = 84/308 (27%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
Y +Y D+ + +++H+ FG EGR+ + F++ YL +Y+D
Sbjct: 18 SLFDSEHYIRTYPDVREAN----ITAVEHYQNFGWIEGRNPSDAFNTIWYLSAYEDAARS 73
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE------------------------ 450
HY G ++ R + + +
Sbjct: 74 ----GLNPLIHYARFGYRDSRPIAPGETVAGSWLADAANNELLPNEMRAFARSYVVIQNS 129
Query: 451 ---DLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGA 505
D + +++ G E R FD+ YL +YDD+R +
Sbjct: 130 SLFDPDFYRQQYDVKARDLIENYIRQGRRERRDPGPSFDASWYLENYDDVR----DNGVD 185
Query: 506 AARHYITHGVKEGRN----------------------------PDAFKALEYIASHEDLI 537
H++ +G EGR + F A Y ++D+
Sbjct: 186 PFIHFLEYGAAEGRITGPKAVAAHSTIPEQSHAALAPNELERLLEGFDAGFYRRKNKDVD 245
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYI 595
+ +HF+ G+ EGR F+ YL D+ G H++
Sbjct: 246 -------FSKISPLEHFATIGWREGRDPSADFSVKGYLHYNPDV----GLAGINPFLHFL 294
Query: 596 THGMKEGR 603
G++E R
Sbjct: 295 IRGIEEKR 302
Score = 97.5 bits (241), Expect = 6e-18, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 80/221 (36%), Gaps = 39/221 (17%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
D FDS Y+ +Y D+R A HY G EGRNP F + Y++++ED
Sbjct: 17 DSLFDSEHYIRTYPDVREAN----ITAVEHYQNFGWIEGRNPSDAFNTIWYLSAYEDAAR 72
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ + H++ FG + R + + L + ++
Sbjct: 73 SGLNP-------LIHYARFGYRDSRPIAPGET---VAGSWLADAANNELLPNEMRAFARS 122
Query: 515 VKEGRNPDAFKALEYIASHE----DLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFN 568
+N F Y ++ DLI +++ G E R +F+
Sbjct: 123 YVVIQNSSLFDPDFYRQQYDVKARDLI--------------ENYIRQGRRERRDPGPSFD 168
Query: 569 PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISG 609
YL +YDD+ + + H++ +G EGR G
Sbjct: 169 ASWYLENYDDVRD----NGVDPFIHFLEYGAAEGRITGPKA 205
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
R F + YI ++ D+ A +H+ NFG+ EGR+ + FN YL++Y
Sbjct: 15 RFDSLFDSEHYIRTYPDVREANIT-------AVEHYQNFGWIEGRNPSDAFNTIWYLSAY 67
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKS 622
+D HY G ++ R I+ + + L++ +
Sbjct: 68 EDAAR----SGLNPLIHYARFGYRDSR--PIAPGETVAGSWLADAA 107
Score = 40.9 bits (94), Expect = 0.69, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 43/136 (31%), Gaps = 22/136 (16%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNV 414
+ + + I ++HF G EGRD F YL D+
Sbjct: 231 GFDAGFYRRKNKDVDFSKI-----SPLEHFATIGWREGRDPSADFSVKGYLHYNPDV--- 282
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
G H++ G++E R I D AD + + ++ G
Sbjct: 283 -GLAGINPFLHFLIRGIEEKR----------IWRPLDRTPQPADGVSEWRGYGEVWARSG 331
Query: 475 CE-EGRFVTFDSYLYL 489
+ EGR + ++
Sbjct: 332 EDLEGREPDVHALNFV 347
>gi|158512138|gb|ABW69099.1| structural toxin protein [Legionella pneumophila]
Length = 4669
Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats.
Identities = 59/435 (13%), Positives = 119/435 (27%), Gaps = 6/435 (1%)
Query: 37 THRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS 96
T+ ++ +++ L+ + + + S + N Y TP +
Sbjct: 3661 TYTVNANLSSLSTSGSATQGSNTHSYDNSTHVLTVTISTGESLTIDMDNGSYTFTP--PA 3718
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNA-LHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
IN V G G + + G L+ D +
Sbjct: 3719 NITSSINRIINYVLVDGDGDTAAATITFNIDISGFNDPLVVRDDLVLTNQPAVSGQDVIS 3778
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
+ + +S + A + S + Y
Sbjct: 3779 IPTWALLANDTGGSGVSSVSSVTQPVAEGTVVLNAGSVAFTEESNSAADGTYNGSTSDPF 3838
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
T S +DL +N +D S +G N TI + + ++G
Sbjct: 3839 RYTNTTGSQSA-TAKVDLDRTQAGENRLDGTYRSEILLGRDTSNDTIIGNDGNDILIGLG 3897
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + G + +++ +GND DG +G DT Y + + ++
Sbjct: 3898 GNDTLSGGNGDDILAGGAGNDTLDGGAGNDTATYIDATAGVTVSLNTSSAQNTVG--AGT 3955
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D L+++E L + + ++ + + + G D + G
Sbjct: 3956 DTLTNIENLTGSKFNDTLTGNNSANTIKGLEGNDTISGLGGNDTLDGGSGDDVIIGGLGD 4015
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
DI S A V + + ++ + N
Sbjct: 4016 DILTGGSGADQFVLVKGQGGASAGAAPIDTITDFEVNIDKIVINGNNITGVSVSTPVSNT 4075
Query: 456 FADAPDLVQVGKDHF 470
+ + +HF
Sbjct: 4076 YTITVNYSDAATEHF 4090
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND++ G + N+ GND G G+DTFF+ + + D
Sbjct: 4520 LNGGNGNDILHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDD------GGVDTITDF 4573
Query: 331 NEHKQDFLSDVERLRFAD 348
+ D SD L +D
Sbjct: 4574 KANPVDKSSDASVLNLSD 4591
>gi|23011040|ref|ZP_00051528.1| COG2931: RTX toxins and related Ca2+-binding proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 301
Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats.
Identities = 68/323 (21%), Positives = 115/323 (35%), Gaps = 32/323 (9%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYG--APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
D +G + + IYG + GN + + G D
Sbjct: 3 GNDTIYGGDGSDQIIGEAGNDVIYGQDGNDYAAGN---PGDDTLHGGRGDDFLVGEQGAD 59
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
L+ G N E + G + + + +++ G +GND G+ N+
Sbjct: 60 LV----YGDEGNDFVAGGEDDDIVHGGDGDDLVDGDLGNDTLFGDAGNDTAFGDDGNDRM 115
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
SG D DG+ G+DT + + + A ++ D + + E F+D+
Sbjct: 116 SGGSGIDTLDGALGVDTAVFDFAFAQAGVSSA--GTLSVIAGQNSTDTVKNTEIFEFSDR 173
Query: 350 CID--SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYL 405
I N + ++ + I ++ H+ +G EGRD FD+ YL
Sbjct: 174 SIVQGDGNQSVDDLFYFSHYDDVYKNGI-----DAEAHYSTYGWKEGRDPNAFFDTKGYL 228
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQ 464
Y D+ HY+T+G KEGR+P F +Y+A + D+ A +
Sbjct: 229 TVYTDVAAA----GINPLEHYLTYGWKEGRDPSAQFDTKQYLAVNGDVAAAGINPLL--- 281
Query: 465 VGKDHFSNFGCEEGRFVTFDSYL 487
H+ G EGR D
Sbjct: 282 ----HYLENGAVEGRATYDDGAF 300
Score = 91.4 bits (225), Expect = 5e-16, Method: Composition-based stats.
Identities = 68/328 (20%), Positives = 112/328 (34%), Gaps = 40/328 (12%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N TI + ++G +GNDV+ G N+ + G+D G G D F
Sbjct: 1 GPGNDTIYGGDGSDQIIGEAGNDVIYGQDGNDYAAGNPGDDTLHGGRGDD--FLVGEQGA 58
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+Y E V + + D L A +
Sbjct: 59 DLVYGDEGNDFVAGGEDDD--------IVHGGDGDDLVDGDLGNDTLFGDAGNDTAFGDD 110
Query: 376 GQDVFESMKHFYEFGLSEGRDI-TFD---SYLYLGSYDDLRNVFGSDRGAAARH-----Y 426
G D + G D FD + + S L + G + ++ +
Sbjct: 111 GNDRMSGGSGIDTLDGALGVDTAVFDFAFAQAGVSSAGTLSVIAGQNSTDTVKNTEIFEF 170
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FD 484
+ +G + L Y + ++D+ D + H+S +G +EGR FD
Sbjct: 171 SDRSIVQGDGNQSVDDLFYFSHYDDVYKNGID-------AEAHYSTYGWKEGRDPNAFFD 223
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADA 543
+ YL Y D+ + HY+T+G KEGR+P A F +Y+A + D+ A
Sbjct: 224 TKGYLTVYTDVAAAGIN----PLEHYLTYGWKEGRDPSAQFDTKQYLAVNGDVAAA---- 275
Query: 544 PDLVQAGKDHFSNFGYEEGRSITFNPDL 571
H+ G EGR+ +
Sbjct: 276 ---GINPLLHYLENGAVEGRATYDDGAF 300
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 41/263 (15%), Positives = 71/263 (26%), Gaps = 19/263 (7%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ A + + G D G D Y
Sbjct: 3 GNDTIYGGDGSDQIIGEAGNDVIYGQDGNDYAAGNPGDDTLHGGRGDDFLVGEQGADLVY 62
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
D N F + + G L A ++ + G D
Sbjct: 63 GDEGNDFVAGGEDDDIVHGGDGDDLVDGDLGNDTLFGDAGNDTAFGDDGNDRMSGGSGID 122
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG------SDRGAAARHYITHGVKEGRNPD 522
+ F S +V + + + + +G
Sbjct: 123 TLDGALGVDTAVFDFAFAQAGVSSAGTLSVIAGQNSTDTVKNTEIFEFSDRSIVQGDGNQ 182
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
+ L Y + ++D+ + H+S +G++EGR F+ YLT Y D+
Sbjct: 183 SVDDLFYFSHYDDVYK-------NGIDAEAHYSTYGWKEGRDPNAFFDTKGYLTVYTDVA 235
Query: 581 NVFGSDRSAAAQHYITHGMKEGR 603
+HY+T+G KEGR
Sbjct: 236 AA----GINPLEHYLTYGWKEGR 254
>gi|296106233|ref|YP_003617933.1| hypothetical protein lpa_01009 [Legionella pneumophila 2300/99 Alcoy]
gi|295648134|gb|ADG23981.1| hypothetical protein lpa_01009 [Legionella pneumophila 2300/99 Alcoy]
Length = 4669
Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats.
Identities = 59/435 (13%), Positives = 119/435 (27%), Gaps = 6/435 (1%)
Query: 37 THRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS 96
T+ ++ +++ L+ + + + S + N Y TP +
Sbjct: 3661 TYTVNANLSSLSTSGSATQGSNTHSYDNSTHVLTVTISTGESLTIDMDNGSYTFTP--PA 3718
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNA-LHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
IN V G G + + G L+ D +
Sbjct: 3719 NITSSINRIINYVLVDGDGDTAAATITFNIDISGFNDPLVVRDDLVLTNQPAVSGQDVIS 3778
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
+ + +S + A + S + Y
Sbjct: 3779 IPTWALLANDTGGSGVSSVSSVTQPVAEGTVVLNAGSVAFTEESNSAADGTYNGSTSDPF 3838
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
T S +DL +N +D S +G N TI + + ++G
Sbjct: 3839 RYTNTTGSQSA-TAKVDLDRTQAGENRLDGTYRSEILLGRDTSNDTIIGNDGNDILIGLG 3897
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + G + +++ +GND DG +G DT Y + + ++
Sbjct: 3898 GNDTLSGGNGDDILAGGAGNDTLDGGAGNDTATYIDATAGVTVSLNTSSAQNTVG--AGT 3955
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D L+++E L + + ++ + + + G D + G
Sbjct: 3956 DTLTNIENLTGSKFNDTLTGNNSANTIKGLEGNDTISGLGGNDTLDGGSGDDVIIGGLGD 4015
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
DI S A V + + ++ + N
Sbjct: 4016 DILTGGSGADQFVLVKGQGGASAGAAPIDTITDFEVNIDKIVINGNNITGVSVSTPVSNT 4075
Query: 456 FADAPDLVQVGKDHF 470
+ + +HF
Sbjct: 4076 YTITVNYSDAATEHF 4090
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND++ G + N+ GND G G+DTFF+ + + D
Sbjct: 4520 LNGGNGNDILHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDD------GGVDTITDF 4573
Query: 331 NEHKQDFLSDVERLRFAD 348
+ D SD L +D
Sbjct: 4574 KANPVDKSSDASVLNLSD 4591
>gi|119489829|ref|ZP_01622584.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
gi|119454257|gb|EAW35408.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
Length = 299
Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNV 498
Y+ + + A + G DHF G E FD Y Y D+
Sbjct: 9 DEDFYLDQYPAVSEAV--DAGEFESGLDHFLQVGQFESLQPNPLFDPAYYRSIYTDVSAA 66
Query: 499 FGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+ A H+I G E RNP+ F Y+ + D+ AF +HF F
Sbjct: 67 IEREAITEAEHFILFGQFEQRNPNPLFDTAYYLEQYPDVETAFQAEQLT---PFEHFFRF 123
Query: 558 GYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGRAL 605
G EGR+ + F+ Y ++ +H+I G+K G+
Sbjct: 124 GQFEGRNPSLFFDALFYQERNPEVITAIEDGVVNSLFEHFIRFGLKRGKLG 174
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 69/171 (40%), Gaps = 10/171 (5%)
Query: 398 TFDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
D YL Y + + + H++ G E P+ F Y + + D+ A
Sbjct: 7 LLDEDFYLDQYPAVSEAVDAGEFESGLDHFLQVGQFESLQPNPLFDPAYYRSIYTDVSAA 66
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
+HF FG E R FD+ YL Y D+ F +++ H+
Sbjct: 67 IEREAITEA---EHFILFGQFEQRNPNPLFDTAYYLEQYPDVETAFQAEQLTPFEHFFRF 123
Query: 514 GVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G EGRNP F AL Y + ++I A D +V + +HF FG + G+
Sbjct: 124 GQFEGRNPSLFFDALFYQERNPEVITAIED--GVVNSLFEHFIRFGLKRGK 172
Score = 89.5 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 7/129 (5%)
Query: 483 FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
D YL Y + + + H++ G E P+ F Y + + D+ A
Sbjct: 8 LDEDFYLDQYPAVSEAVDAGEFESGLDHFLQVGQFESLQPNPLFDPAYYRSIYTDVSAAI 67
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+HF FG E R+ F+ YL Y D+ F +++ +H+ G
Sbjct: 68 EREAITEA---EHFILFGQFEQRNPNPLFDTAYYLEQYPDVETAFQAEQLTPFEHFFRFG 124
Query: 599 MKEGRALGI 607
EGR +
Sbjct: 125 QFEGRNPSL 133
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/197 (21%), Positives = 63/197 (31%), Gaps = 15/197 (7%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
V + + HF + G E FD Y Y D+
Sbjct: 7 LLDEDFYLDQYPAVSEAVDAGEFESGLDHFLQVGQFESLQPNPLFDPAYYRSIYTDVSAA 66
Query: 415 FGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ A H+I G E RNP+ F Y+ + D+ AF +HF F
Sbjct: 67 IEREAITEAEHFILFGQFEQRNPNPLFDTAYYLEQYPDVETAFQAEQLTP---FEHFFRF 123
Query: 474 GCEEGRFVT--FDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDAFKALEYI 530
G EGR + FD+ Y ++ + H+I G+K G+ + +
Sbjct: 124 GQFEGRNPSLFFDALFYQERNPEVITAIEDGVVNSLFEHFIRFGLKRGKLGVSPEPEN-- 181
Query: 531 ASHEDLINAFADAPDLV 547
DL F L
Sbjct: 182 ----DLSGVFQLDTLLG 194
>gi|209549306|ref|YP_002281223.1| hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535062|gb|ACI54997.1| hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 1582
Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats.
Identities = 78/555 (14%), Positives = 133/555 (23%), Gaps = 40/555 (7%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
AD L D+ ITE + R AL +S E
Sbjct: 936 ADTLASSTSGHALVGGAGDDIYLVGNQGVTITEATGGGTDEIRTALTSYSMAAFANVERL 995
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + N + I AD G G T NA I L
Sbjct: 996 TFTGTGNATLTGNSGNNVISGGTGNDTLIGGAGADQLIGGAGTDTTSYANAAAAITINLK 1055
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G ++ + S T V + + + + + + +
Sbjct: 1056 TGVHIGDAAGDTFSSIETFIGSSSKDTFVGNGTAVTFNGGVGTDTVSYSSSAAAVSVILG 1115
Query: 194 IYGAPKGSLGNNIYKI--------------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
G + G + + + QT+ GG+D ++
Sbjct: 1116 ASGVTTVASGGDAEGNRLISIEQVIGSAFADTLGSTATTTQTLQGGGGNDTYVVS--SQN 1173
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVF 298
+ + I + ++A + +E + +GN + GN+ +NV +GND
Sbjct: 1174 TVITESSGGGDDEIRTTAASYSMAAYANVEHLTFTGTGNATLTGNAGDNVISGGTGNDTL 1233
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G +G D A + AI + N + D +
Sbjct: 1234 IGGAGADQLIGGAGTDSASYANAAAAITLDLKNGAHTGDAAGDSF----DSIETFIGSNF 1289
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+AS + L G +++ + T + D L N
Sbjct: 1290 NDTFFSSASADHLNGGAG--TLDTIDYSLSSDAVNINLTTNVVSGGDAAGDVLVNFERVV 1347
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ L S L+ D LV + E
Sbjct: 1348 GSSF-----------------ADTLASSTSGHALVGGAGDDIYLVDAQGVTITEAAGEGT 1390
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
+ Y + D A G L + L
Sbjct: 1391 DEIRTTLTTYSMANDTNVERLTFTGTGNATLTGNTGDNIITGGTGNDTLNGGGGADQLHG 1450
Query: 539 AFADAPDLVQAGKDH 553
D G H
Sbjct: 1451 GSGDDTLFSGTGDFH 1465
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 62/495 (12%), Positives = 123/495 (24%), Gaps = 28/495 (5%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S ++ A + G G T+ + + + Y
Sbjct: 414 GTSSADTFVSGSDASFFNGGAGVDTVDYSTSTAGVNVDFWTSTGSGGDAAGDTYANIEKA 473
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
++ ++S I+ VQ + G++ +
Sbjct: 474 IGSAYDDLLVSAGPGHVLQGGTGNDVY-------ILGVQGVSVVEAAGEGDDTVQTAQGT 526
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ ++ G + I + ++ G N + + ++G
Sbjct: 527 LSIAGYANVERLTFTGSVNFVGTGNALDNIITGGIANDTLDGGAGNDQLFGGAGTDILIG 586
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+GNDV+ G N+ +G D DG +G DT Y N +
Sbjct: 587 GAGNDVLQGGDGNDTLTGGAGADQLDGGTGNDTAAYTG-------QITLNLKTGVHTGDA 639
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL---IQVIGQDVFESMKH---FY 387
D S +E L + V A + + +V
Sbjct: 640 AGDTFSGIEVLSGSSANDTFVGNGTTITFNGGAGTDIVDYSTSAAAVNVTLGAAGVTTVA 699
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G +EG + + S+ D S + + + +A
Sbjct: 700 TGGDAEGNSLVNIERVVGSSFADTLGSSTSGHTLVGGAGDDIYLVDNQGVTIVEAAGEGT 759
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEE-GRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ + + F+ G D + D L G+D
Sbjct: 760 DEIRTSLTTFSMANYTNIERVTFTGTGAVNLTGGAGDDILTGGAANDILDGAGGNDIL-- 817
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ G + Y + + A D F+ EG
Sbjct: 818 ---IGSGGADQLIGGTGTDTASYANAAASITLNLKTGVHTGDAAGDTFTGIEAFEG--SN 872
Query: 567 FNPDLYLTSYDDLWN 581
F+ + ++ D N
Sbjct: 873 FDDTFFSSASADTLN 887
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/302 (10%), Positives = 73/302 (24%), Gaps = 13/302 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ G D +D + + G + +
Sbjct: 193 GGNDILIGGAGADRLDGGAGVDTVDYSTSTAGVTVDFWTST------GSGGDAAGDTYVN 246
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE +GS+ D ++ +V +GNDV+ + A + + + +
Sbjct: 247 IEKAIGSAYGDTLVSAVPGHVLQGGAGNDVYILGVQGVSVVEAAGEGDDTVQTAQGTLSI 306
Query: 328 YDANEHKQDFLSDVERLRFADQCID--SVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
++ + +D L+ A + L G D+
Sbjct: 307 AGYANVERLTFTGSVNFVGTGNALDNTITGGVANDTLDGGAGNDQLFGGAGTDILIGGAG 366
Query: 386 FYEFGLSEGRD-----ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ +G D + + D + +I + +
Sbjct: 367 ADQLDGGDGADNASYSSSTSAVTINLKTGVYTGDAAGDTFTSIEGFIGTSSADTFVSGSD 426
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
+ + D ++ + + G G +YDDL G
Sbjct: 427 ASFFNGGAGVDTVDYSTSTAGVNVDFWTSTGSGGDAAGDTYANIEKAIGSAYDDLLVSAG 486
Query: 501 SD 502
Sbjct: 487 PG 488
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/457 (12%), Positives = 103/457 (22%), Gaps = 75/457 (16%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKV--VDLTFEETSIHSDIKFISS------ 84
D+ I E + R +L +S ++ + +
Sbjct: 740 DIYLVDNQGVTIVEAAGEGTDEIRTSLTTFSMANYTNIERVTFTGTGAVNLTGGAGDDIL 799
Query: 85 -NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ I AD G G T NA I L G
Sbjct: 800 TGGAANDILDGAGGNDILIGSGGADQLIGGTGTDTASYANAAASITLNLKTGVHTGDAAG 859
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
G++ ++
Sbjct: 860 DTFTGIEAFEGSN----------------------------------------------- 872
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ S T+ + G LD + ++++ + GG +A
Sbjct: 873 -----FDDTFFSSASADTLNGAAG--TLDTIDYSLSSDAVNVDLTTNIVSGGDAAGDVLA 925
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
E VVGSS D + +++ + +G+D++ + +
Sbjct: 926 N---FERVVGSSFADTLASSTSGHALVGGAGDDIY--------LVGNQGVTITEATGGGT 974
Query: 324 AIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
I + ++VERL F +++ + LI G D
Sbjct: 975 DEIRTALTSYSMAAFANVERLTFTGTGNATLTGNSGNNVISGGTGNDTLIGGAGADQLIG 1034
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ + D S F
Sbjct: 1035 GAGTDTTSYANAAAAITINLKTGVHIGDAAGDTFSSIETFIGSSSKDTFVGNGTAVTFNG 1094
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ +A A + L G ++ G EG
Sbjct: 1095 GVGTDTVSYSSSAAAVSVILGASGVTTVASGGDAEGN 1131
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/359 (13%), Positives = 83/359 (23%), Gaps = 34/359 (9%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + ITE + + R +S E + + N
Sbjct: 1165 DTYVVSSQNTVITESSGGGDDEIRTTAASYSMAAYANVEHLTFTGTGNATLTGNAGDNVI 1224
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL-GLMHPGSYNGGYPVYGVDN 151
+ I AD G G + NA I L H G G
Sbjct: 1225 SGGTGNDTLIGGAGADQLIGGAGTDSASYANAAAAITLDLKNGAHTGDAAGDSFDSIETF 1284
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
N + + + + + G ++
Sbjct: 1285 IGSNFNDTFFSSASADHLNGGAGTLDTIDYSLSSDAVNINLTTNVVSGGDAAGDVLVNFE 1344
Query: 212 QQKDSPFIQTI---------YDSGGDDLL--------DLTLIGGVKNYIDLNTESWS--- 251
+ S F T+ GDD+ G + I ++S
Sbjct: 1345 RVVGSSFADTLASSTSGHALVGGAGDDIYLVDAQGVTITEAAGEGTDEIRTTLTTYSMAN 1404
Query: 252 ------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N T+ +T + G +GND + G + SG+D +G
Sbjct: 1405 DTNVERLTFTGTGNATLTGNTGDNIITGGTGNDTLNGGGGADQLHGGSGDDTLFSGTGDF 1464
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ S + + D + ++ I V +
Sbjct: 1465 HLYGDDGSDTLNLILGQG---FADGGNDGDTYHVNMAL----AATIKDTGVGGSDAVYL 1516
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 70/227 (30%), Gaps = 20/227 (8%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I +++ G+SG+D + G N++ +G D DG +G+DT Y + + +
Sbjct: 171 ITGTAGNDTLNGTSGDDQISGLGGNDILIGGAGADRLDGGAGVDTVDYSTSTAGVTVDFW 230
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED-LIQVIGQDVF 380
+ + D ++E+ + V+ +L+ A + ++ V G V
Sbjct: 231 TSTGS---GGDAAGDTYVNIEKAIGSAYGDTLVSAVPGHVLQGGAGNDVYILGVQGVSVV 287
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
E+ EG D + L + + + G
Sbjct: 288 EA--------AGEGDDTVQTAQGTLS-----IAGYANVERLTFTGSVNFV---GTGNALD 331
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ +++ L + G D + +
Sbjct: 332 NTITGGVANDTLDGGAGNDQLFGGAGTDILIGGAGADQLDGGDGADN 378
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 48/366 (13%), Positives = 100/366 (27%), Gaps = 22/366 (6%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S +D ++ + ++ + + G G I + A + +
Sbjct: 1142 SAFADTLGSTATTTQTLQGGGGNDTYVVSSQNTVITESSGGGDDEIRTTAASYSMAAYAN 1201
Query: 134 LMH---PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+ H G+ N DN + +++ + A + + +
Sbjct: 1202 VEHLTFTGTGNATLTGNAGDNVISGGTGNDTLIGGAGADQLIGGAGTDSASYANAAAAIT 1261
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS-------GGDDLLDLTLIGGVKNYI 243
+ GA G + + S F T + S GG LD + +
Sbjct: 1262 LDLKNGAHTGDAAGDSFDSIETFIGSNFNDTFFSSASADHLNGGAGTLDTIDYSLSSDAV 1321
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++N + GG + E VVGSS D + +++ + +G+D++
Sbjct: 1322 NINLTTNVVSGGDAAGDVL---VNFERVVGSSFADTLASSTSGHALVGGAGDDIY----- 1373
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
+ + I + ++VERL F +I+
Sbjct: 1374 ---LVDAQGVTITEAAGEGTDEIRTTLTTYSMANDTNVERLTFTGTGNATLTGNTGDNII 1430
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L G D G + L F
Sbjct: 1431 TGGTGNDTLNGGGGADQLHGGSGDDTLFSGTGDFHLYGDDGSDTLNLILGQGFADGGNDG 1490
Query: 423 ARHYIT 428
+++
Sbjct: 1491 DTYHVN 1496
>gi|218675222|ref|ZP_03524891.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Rhizobium etli GR56]
Length = 971
Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats.
Identities = 63/455 (13%), Positives = 119/455 (26%), Gaps = 43/455 (9%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
DV S ITEL + R AL +S + E + F + N T
Sbjct: 463 DVYIVDSASDVITELVSAGTDEIRTALAAYSIAALVNVENLTYTGSANFAGTGNALANTI 522
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + AD G+G + + + D
Sbjct: 523 TGGAGNDVLNGGIGADSLIGGVGDDAYIV-------------------DDAGDLVTEAAD 563
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ +Y + D FG A + +A GA +L +
Sbjct: 564 AGTDTIWTTLAAYTLGTDVENLTYFGKAAFAGTGNDLANMITGGAAADTLSGGV--GNDT 621
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA--------- 263
+ GDD + G + + E ++ T+A
Sbjct: 622 LNGGGGADRLIGGTGDDTYIVDHAGDLVTEV--TNEGIDTVRTTLAAHTLAANIENLTYI 679
Query: 264 --------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+++ ++ G + D + G N+ +G D G +G D + L
Sbjct: 680 STAAFVGIGNSLDNTITGGAAADTLSGGDGNDTLNGGAGADRLIGGTGDDAYVVDIAGDL 739
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
V ++VE L + + + A + L
Sbjct: 740 VTEAADAGTDTVRT-TLAGYTLGNNVENLTYTGSASFSGAGNALANTITGGAGNDVLNGG 798
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYL-YLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D + + DI ++ + + + + +I G
Sbjct: 799 AGADSLIGGTGHDTYIVDNAGDIVTEAADAGTDTVRAILAAYTLETNVENLTFIGTGAFA 858
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
G + + L + D
Sbjct: 859 GTGNALNNVIVGGSGSNTLTGGAGNDILTGGAAAD 893
Score = 89.5 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 68/533 (12%), Positives = 132/533 (24%), Gaps = 21/533 (3%)
Query: 30 YKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYV 89
D +TE+ + R L + ++ E + S F+ N
Sbjct: 32 TSDDTYIVDHAGDLVTEVTNEGIDTVRTTLAAHTLAANI--ENLTYISTAAFVGIGNSLD 89
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
T + D D G G ++ + +
Sbjct: 90 NTITGGAAADTLSGGDGNDTLNGGAGADRLIGGTGDDA----------YVVDIAGDLVTE 139
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
D D+ T++ Y + + G + + +A GA L N
Sbjct: 140 AADAGTDTVRTTLAGYTLGNNVENLTYTGSASFSGAGNALANTITGGAGNDVL-NGGAGA 198
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-----IGGYEKNMTIAQ 264
+ + I D+ GD + + G +L + + +
Sbjct: 199 DSLIGGTGHDTYIVDNAGDIVTEAADAGTDTVRTNLASYTLTGNVENLSFVGTGAFAGTG 258
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + ++ G + D + G++ N+ +G D G G DT+ L E
Sbjct: 259 NNLDNTITGGAAIDTLSGDAGNDTLDGGAGADTLIGGEGDDTYVVDHAGDLVAEAADEGT 318
Query: 325 IIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
V A SDVE L + + + + A + L G D+
Sbjct: 319 DTVRTA-LASYTLGSDVENLTYIGKAALAGTGNSLANTITGGAGADTLDGNAGADMLIGG 377
Query: 384 KHFYEFGLSE-GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ + G +T + + Y G
Sbjct: 378 AGNDTYIVDNVGDVVTEGLNAGTDLIKTALSSYTLGNNVENLLYTGSASFIGTGNALANT 437
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ A + L + VG D + + + +
Sbjct: 438 IIGGAGSDVLDGGAGNDRLDGGVGDDVYIVDSASDVITELVSAGTDEIRTALAAYSIAAL 497
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
Y G + A ++ L + G D +
Sbjct: 498 VNVENLTYTGSANFAGTGNALANTITGGAGNDVLNGGIGADSLIGGVGDDAYI 550
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 71/536 (13%), Positives = 137/536 (25%), Gaps = 39/536 (7%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + R L ++ ++ E S F + N T
Sbjct: 208 DTYIVDNAGDIVTEAADAGTDTVRTNLASYTLTGNV--ENLSFVGTGAFAGTGNNLDNTI 265
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D G G T++ + + D
Sbjct: 266 TGGAAIDTLSGDAGNDTLDGGAGADTLIGGEGDD----------TYVVDHAGDLVAEAAD 315
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ SY + D G A + +A GA
Sbjct: 316 EGTDTVRTALASYTLGSDVENLTYIGKAALAGTGNSLANTITGGA-----------GADT 364
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGG------VKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + G+D + +G + T S G + +
Sbjct: 365 LDGNAGADMLIGGAGNDTYIVDNVGDVVTEGLNAGTDLIKTALSSYTLGNNVENLLYTGS 424
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
G++ + +IG + ++V +GND DG G D + + S +
Sbjct: 425 ASFIGTGNALANTIIGGAGSDVLDGGAGNDRLDGGVGDDVYIVDSASDVITELVSAGTDE 484
Query: 327 VYDA-NEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ A + L +VE L + + + + A + L IG D
Sbjct: 485 IRTALAAYSIAALVNVENLTYTGSANFAGTGNALANTITGGAGNDVLNGGIGADSLIGGV 544
Query: 385 HFYEFGLSEGRDITFDSYL-YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ + + D+ ++ + + Y G D +
Sbjct: 545 GDDAYIVDDAGDLVTEAADAGTDTIWTTLAAYTLGTDVENLTYFGKAAFAGTGNDLANMI 604
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD-------LR 496
A+ + L + G D ++ V L ++
Sbjct: 605 TGGAAADTLSGGVGNDTLNGGGGADRLIGGTGDDTYIVDHAGDLVTEVTNEGIDTVRTTL 664
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
YI+ G + A+ + L + AG D
Sbjct: 665 AAHTLAANIENLTYISTAAFVGIGNSLDNTITGGAAADTLSGGDGNDTLNGGAGAD 720
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 69/541 (12%), Positives = 128/541 (23%), Gaps = 43/541 (7%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + E + R AL ++ D+ E + + N T
Sbjct: 299 DTYVVDHAGDLVAEAADEGTDTVRTALASYTLGSDV--ENLTYIGKAALAGTGNSLANTI 356
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ AD+ G G T + N + L +
Sbjct: 357 TGGAGADTLDGNAGADMLIGGAGNDTYIVDNVGDVVTEGL-------------------N 397
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D T++ SY + + G + + +A I GA L +
Sbjct: 398 AGTDLIKTALSSYTLGNNVENLLYTGSASFIGTGNALANTIIGGAGSDVLDGGA--GNDR 455
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
D++ L+ + I ++S + +
Sbjct: 456 LDGGVGDDVYIVDSASDVI-TELVSAGTDEIRTALAAYSIAALVNVENLTYTGSANFAGT 514
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++ + + G + N+V G D G G D + L ++
Sbjct: 515 GNALANTITGGAGNDVLNGGIGADSLIGGVGDDAYIVDDAGDLVTEAADAGTDTIWTTLA 574
Query: 333 HKQDFLSDVERLR-FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+DVE L F +++ A+ + L +G D
Sbjct: 575 A-YTLGTDVENLTYFGKAAFAGTGNDLANMITGGAAADTLSGGVGNDTLNGGGGADRLIG 633
Query: 392 SEGRDITF-DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G D D L + + AA + A +
Sbjct: 634 GTGDDTYIVDHAGDLVTEVTNEGIDTVRTTLAAHTLAANIENLTYISTAAFVGIGNSLDN 693
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
+ A G D + + Y+ +D G
Sbjct: 694 TITGGAAADTLSGGDGNDTLNGGAGADRLIGGTGDDAYVVDIAGDLVTEAADAGTDTVRT 753
Query: 511 ITHGVKEGRNPDAF----------------KALEYIASHEDLINAFADAPDLVQAGKDHF 554
G G N + + A ++ L + G D +
Sbjct: 754 TLAGYTLGNNVENLTYTGSASFSGAGNALANTITGGAGNDVLNGGAGADSLIGGTGHDTY 813
Query: 555 S 555
Sbjct: 814 I 814
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 41/367 (11%), Positives = 91/367 (24%), Gaps = 29/367 (7%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + L ++ D+ E + F + N
Sbjct: 547 DAYIVDDAGDLVTEAADAGTDTIWTTLAAYTLGTDV--ENLTYFGKAAFAGTGNDLANMI 604
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D G G ++ + + +
Sbjct: 605 TGGAAADTLSGGVGNDTLNGGGGADRLIGGTGDD----------TYIVDHAGDLVTEVTN 654
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ ++ + + A + + + GA +L
Sbjct: 655 EGIDTVRTTLAAHTLAANIENLTYISTAAFVGIGNSLDNTITGGAAADTLSGGD--GNDT 712
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIG---------------GVKNYIDLNTESWSSIGGYE 257
+ GDD + + G L +
Sbjct: 713 LNGGAGADRLIGGTGDDAYVVDIAGDLVTEAADAGTDTVRTTLAGYTLGNNVENLTYTGS 772
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + A + + ++ G +GNDV+ G + + +G+D + + D A +
Sbjct: 773 ASFSGAGNALANTITGGAGNDVLNGGAGADSLIGGTGHDTYIVDNAGDIVTEAADAGTDT 832
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ A + E+ + V + L A + L
Sbjct: 833 VRAILAAYTLETNVENLTFIGTGAFAGTGNALNNVIVGGSGSNTLTGGAGNDILTGGAAA 892
Query: 378 DVFESMK 384
D+F
Sbjct: 893 DIFAYSA 899
>gi|126463941|ref|YP_001045054.1| putative outer membrane adhesin like proteiin [Rhodobacter
sphaeroides ATCC 17029]
gi|126105752|gb|ABN78282.1| putative outer membrane adhesin like proteiin [Rhodobacter
sphaeroides ATCC 17029]
Length = 2678
Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 91/300 (30%), Gaps = 8/300 (2%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + + S G D++ + GG N + G E N ++
Sbjct: 2127 NLEGTDGADLLIGSRGADVISGRMFNDTLMGGAGNDSLYGNGDDDRLYGNEGNDSLYGEE 2186
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G G+D+V+G N+ GND G +G DT Y + +
Sbjct: 2187 GNDWLHGGQGDDLVVGGDGNDTLAGGLGNDTLQGGAGNDTASYETATEGVTVSLALQGEG 2246
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ + D L+ +E L ++ + + ++L A + L+ G D
Sbjct: 2247 QFVNAQEGNDLLTSIENLTGSNHDDTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGN 2306
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
+ + G ++ G+D ++ I + + A L +
Sbjct: 2307 DIADYAAATGGVTVNLARDGQAQNIGADQGTDVLSSIEGVIGSAFNDILSGSAVANLIFG 2366
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF---VTFDSYLYLGSYDDLRNVFGSDR 503
DL A ++ + V D D + FG D
Sbjct: 2367 GDGADLATGGAGNDTILGGAGSDSLYGNLGDDLLFGDVGNDWIHGGQGNDTVLGGFGDDT 2426
Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats.
Identities = 56/448 (12%), Positives = 111/448 (24%), Gaps = 42/448 (9%)
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI---EV 211
ND+ + + + + D +G + ++G G+++
Sbjct: 2152 NDTLMGGAGNDSLYGNGDDDRLYGNEGNDSLYGEEGNDWLHGGQ----GDDLVVGGDGND 2207
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM------TIAQH 265
T+ G+D + E N +
Sbjct: 2208 TLAGGLGNDTLQGGAGNDTASYETATEGVTVSLALQGEGQFVNAQEGNDLLTSIENLTGS 2267
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++++G G++V+ G + N+V +GND G +G D Y A + + +
Sbjct: 2268 NHDDTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATGGVTVNLARDGQ 2327
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ D LS +E + + +++ + G D
Sbjct: 2328 AQNIGADQGTDVLSSIEGVIGSAFNDILSGSAVANLIFGGDGADLATGGAGNDTILGGAG 2387
Query: 386 FYEFGLSEGRDITFDSYL-----YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ G D+ F D + FG D A +G + F
Sbjct: 2388 SDSLYGNLGDDLLFGDVGNDWIHGGQGNDTVLGGFGDDTLAGGVGDDVVDGGDGIDTVEF 2447
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSN-----FGCEEGRFVTFDSYLYLGSYDDL 495
+ + DL + G D + + R + +
Sbjct: 2448 QTATAGVTV-DLSLQGQAQRISAEEGTDTLFSIENILGSRYDDRLLGDAGSNLIDGSAGN 2506
Query: 496 RNVFGSDRGAAA----------------RHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
G +G L A ++ L
Sbjct: 2507 DTAMGQAGEDLIFGGDGNDSLYGNQDNDTLVGGNGNDWLHGGQGNDLLVGDAGNDTLNGG 2566
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSITF 567
D + G D G + F
Sbjct: 2567 VGDDVLVGGQGFD--LLTGGTGADTFVF 2592
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 78/261 (29%), Gaps = 9/261 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
S I S + + D G G ++ + + +G
Sbjct: 2348 GSAFNDILSGSAVANLIFGGDGADLATGGAGNDTILGGAGSDSLYGNLGDDLLFGDVGND 2407
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G V G D D+ V + +D AT V+ +++Q
Sbjct: 2408 WIHGGQGNDTVLGGFGD---DTLAGGVGDDVVDGGDGIDTVEFQTATAGVTVDLSLQGQA 2464
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + S + + G +L+D G N + I G
Sbjct: 2465 QRISAEEGTDTLFSIENILGSRYDDRLLGDAGSNLID----GSAGNDTAMGQAGEDLIFG 2520
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N ++ + +++VG +GND + G N++ +GND +G G D
Sbjct: 2521 GDGNDSLYGNQDNDTLVGGNGNDWLHGGQGNDLLVGDAGNDTLNGGVGDDVLV--GGQGF 2578
Query: 316 YKIYRFENAIIVYDANEHKQD 336
+ A + D
Sbjct: 2579 DLLTGGTGADTFVFGSLDSAD 2599
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/360 (13%), Positives = 99/360 (27%), Gaps = 33/360 (9%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEI----NFDKADVWRYGIGKGTILSHNALH 126
E + + G + + I + D G +
Sbjct: 2230 ETATEGVTVSLALQGEGQFVNAQEGNDLLTSIENLTGSNHDDTLIGDEGDNVLSGLAGND 2289
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
+ GG + ND + + + + D +
Sbjct: 2290 VL------------VGGAGNDTLLGGAGNDIADYAAATGGVTVNLARDGQAQNIGADQGT 2337
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D++ G S I+ G DL GG N L
Sbjct: 2338 DVL---------SSIEGVIGSAFNDILSGSAVANLIFGGDGADLAT----GGAGNDTILG 2384
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S+ G + + + + G GND V+G ++ G+DV DG G+DT
Sbjct: 2385 GAGSDSLYGNLGDDLLFGDVGNDWIHGGQGNDTVLGGFGDDTLAGGVGDDVVDGGDGIDT 2444
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + + E D L +E + + + ++++ +A
Sbjct: 2445 VEFQTATAGVTVDLSLQGQAQRISAEEGTDTLFSIENILGSRYDDRLLGDAGSNLIDGSA 2504
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRGAA 422
+ + G+D+ ++ D + +L+ G +DL +
Sbjct: 2505 GNDTAMGQAGEDLIFGGDGNDSLYGNQDNDTLVGGNGNDWLHGGQGNDLLVGDAGNDTLN 2564
Score = 42.5 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 35/301 (11%), Positives = 72/301 (23%), Gaps = 34/301 (11%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
L D + + ++ + L+ G D +EG D
Sbjct: 2127 NLEGTDGADLLIGSRGADVISGRMFNDTLMGGAGNDSLYGNGDDDRLYGNEGNDSL---- 2182
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
Y G + ++ L +
Sbjct: 2183 -----------------------YGEEGNDWLHGGQGDDLVVGGDGNDTLAGGLGNDTLQ 2219
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
G D S EG V+ G + G+D + + + D
Sbjct: 2220 GGAGNDTASYETATEGVTVSLALQ---GEGQFVNAQEGNDLLTSIENLTGSNHDDTLIGD 2276
Query: 523 AFK-ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWN 581
L +A ++ L+ + L AG D G ++ D + +
Sbjct: 2277 EGDNVLSGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATGGVTVNLARDGQAQN---IGA 2333
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYT 641
G+D ++ + I + + + + ++ LY
Sbjct: 2334 DQGTDVLSSIEGVIGSAFNDILSGSAVANLIFGGDGADLATGGAGNDTILGGAGSDSLYG 2393
Query: 642 D 642
+
Sbjct: 2394 N 2394
>gi|172055176|ref|YP_001806503.1| hemolysin-type calcium-binding protein [Cyanothece sp. ATCC 51142]
gi|171701457|gb|ACB54437.1| hemolysin-type calcium-binding protein [Cyanothece sp. ATCC 51142]
Length = 2077
Score = 104 bits (258), Expect = 6e-20, Method: Composition-based stats.
Identities = 62/390 (15%), Positives = 107/390 (27%), Gaps = 28/390 (7%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
N + + D + G G T+ + + G G
Sbjct: 1175 GNAGNDLLEGKGGNDILLGDAGNDTLKGGTGNDTLNGGDGHDSLDGGDG-NDLLEGGTGN 1233
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ ND+ S D+ SF Y + + G L +
Sbjct: 1234 DILLASGYAGNDTLKGG--SGNDSLDATGVYSFYYLE---LYGEAGNDVLLGGSSSDLLD 1288
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + TI G D+L GG N + L + + G N T+
Sbjct: 1289 GGADYD-LIYGNAGNDTIIGGSGIDIL----YGGTGNDLILGGDDSDYVYGENGNDTLYG 1343
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYK 317
+++ G GNDV+IG + N+ GND +G+SG D S
Sbjct: 1344 GNGNDTITGGFGNDVLIGEAGNDSLQGGDGNDTLEGASGNDNLNGGNHNDHLTGDSGNDT 1403
Query: 318 IYRFENAIIVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + +++ + L +L + + L G
Sbjct: 1404 LEGGNGDDYLAGGSDNDYLSGGDGNDYLEGGSGQDTLFGRTGDDLLYGGSDNDVLNGDAG 1463
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D ++G D+ + D L G+D + G
Sbjct: 1464 NDQLFGETGDDSLNGNDGNDLLNGNNGD----DTLFGSSGNDTLS-----GDAGYDYLDG 1514
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVG 466
D L I+ ++ LI D
Sbjct: 1515 GDNNDQLFGISGNDTLIGGAGDDTLQGDSP 1544
Score = 99.1 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 74/493 (15%), Positives = 135/493 (27%), Gaps = 31/493 (6%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
N + D D+ G T GH+ +Y+
Sbjct: 1061 YGNAGNDSLHGDQGNDTLYGGSGYDLLEGNDGNDTF-YDTWATIYGHSGFDTLISNYSSF 1119
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
YG+ Y N + L S + + SF T + DI+ KG+ G
Sbjct: 1120 NNGYGIHLHYLNYNDLRSRGTGEVLILFSGIESFHISGT-IYDDILIGGNNQDQLKGNAG 1178
Query: 204 NNIY---KIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSI-- 253
N++ T+ G+D L+ +L GG N + +
Sbjct: 1179 NDLLEGKGGNDILLGDAGNDTLKGGTGNDTLNGGDGHDSLDGGDGNDLLEGGTGNDILLA 1238
Query: 254 GGYEKNMTIAQHTVIESV-------------VGSSGNDVVIGNSANNVFFESSGNDVFDG 300
GY N T+ + +S+ G +GNDV++G S++++ + D+ G
Sbjct: 1239 SGYAGNDTLKGGSGNDSLDATGVYSFYYLELYGEAGNDVLLGGSSSDLLDGGADYDLIYG 1298
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQR 359
++G DT S + +Y ++ ++ + + +
Sbjct: 1299 NAGNDTII--GGSGIDILYGGTGNDLILGGDDSDYVYGENGNDTLYGGNGNDTITGGFGN 1356
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+L A + L G D E D + + +
Sbjct: 1357 DVLIGEAGNDSLQGGDGNDTLEGASGNDNLNGGNHNDHLTGDSGNDTLEGGNGDDYLAGG 1416
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
G L + L + G D ++
Sbjct: 1417 SDNDYLSGGDGNDYLEGGSGQDTLFGRTGDDLLYGGSDNDVLNGDAGNDQLFGETGDDSL 1476
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
D L + +FGS G D L I+ ++ LI
Sbjct: 1477 N-GNDGNDLLNGNNGDDTLFGSSGNDTLS--GDAGYDYLDGGDNNDQLFGISGNDTLIGG 1533
Query: 540 FADAPDLVQAGKD 552
D + ++
Sbjct: 1534 AGDDTLQGDSPQN 1546
Score = 99.1 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 60/498 (12%), Positives = 120/498 (24%), Gaps = 24/498 (4%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
FE+ + + F G +++ G + N L
Sbjct: 995 FEDFANAVNEFFTGDYYGNNSAETIVGGSTFYGDYNNYIFAEGGNDRVDAGVGNDL---- 1050
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF--MPQDSMMDASFGYCATPMVSD 187
+ Y G + + + L Y D + S
Sbjct: 1051 --VRGGFGHDYIYGNAGNDSLHGDQGNDTLYGGSGYDLLEGNDGNDTFYDTWATIYGHSG 1108
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI-QTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+ Y + G +++ + S + + G + ++ I
Sbjct: 1109 FDTLISNYSSFNNGYGIHLHYLNYNDLRSRGTGEVLILFSGIESFHISGTIYDDILI--G 1166
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + G N + + ++G +GND + G + N+ G+D DG G D
Sbjct: 1167 GNNQDQLKGNAGNDLLEGKGGNDILLGDAGNDTLKGGTGNDTLNGGDGHDSLDGGDGNDL 1226
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF-----ADQCIDSVNVKQRSI 361
+ + + + + + + V + + +
Sbjct: 1227 LEGGTGNDILLASGYAGNDTLKGGSGNDSLDATGVYSFYYLELYGEAGNDVLLGGSSSDL 1286
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L+ A Y+ + G D G D+ Y + N
Sbjct: 1287 LDGGADYDLIYGNAGNDTIIGGSGIDILYGGTGNDLILGGDDSDYVYGENGNDTLYGGNG 1346
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
G +L+ ++ L A + DH + +
Sbjct: 1347 NDTITGGFGNDVLIGEAGNDSLQGGDGNDTLEGASGNDNLNGGNHNDHLTGDSGNDTLEG 1406
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAA-------RHYITHGVKEGRNPDAFKALEYIASHE 534
YL D + G D + G L A ++
Sbjct: 1407 GNGDD-YLAGGSDNDYLSGGDGNDYLEGGSGQDTLFGRTGDDLLYGGSDNDVLNGDAGND 1465
Query: 535 DLINAFADAPDLVQAGKD 552
L D G D
Sbjct: 1466 QLFGETGDDSLNGNDGND 1483
Score = 81.4 bits (199), Expect = 4e-13, Method: Composition-based stats.
Identities = 54/404 (13%), Positives = 112/404 (27%), Gaps = 35/404 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT--------ILSHNALH 126
+ + + + + D + G G +
Sbjct: 1212 GDGHDSLDGGDGNDLLEGGTGNDILLASGYAGNDTLKGGSGNDSLDATGVYSFYYLELYG 1271
Query: 127 EIGH--ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
E G+ LG +GG + + ND+ + + + D G +
Sbjct: 1272 EAGNDVLLGGSSSDLLDGGADYDLIYGNAGNDTIIGGSGIDILYGGTGNDLILGGDDSDY 1331
Query: 185 VSDIVAVQKIYGAPKGSL-----GNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTL- 235
V +YG GN++ + T+ + G+D L+
Sbjct: 1332 VYGENGNDTLYGGNGNDTITGGFGNDVLIGEAGNDSLQGGDGNDTLEGASGNDNLNGGNH 1391
Query: 236 ----IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
G N + G N ++ + + G SG D + G + +++ +
Sbjct: 1392 NDHLTGDSGNDTLEGGNGDDYLAGGSDNDYLSGGDGNDYLEGGSGQDTLFGRTGDDLLYG 1451
Query: 292 SSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
S NDV +G +G D F + ++ ++ D LS
Sbjct: 1452 GSDNDVLNGDAGNDQLFGETGDDSLNGNDGNDLLNGNNGDDTLFGSS--GNDTLSGDAGY 1509
Query: 345 RFADQCIDSV---NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ D ++ + L A + L Q+ + + ++ S R F
Sbjct: 1510 DYLDGGDNNDQLFGISGNDTLIGGAGDDTLQGDSPQNTGDLAESVWDIESSHIRSQDFTL 1569
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
+ +D+ N +D + + L
Sbjct: 1570 NRQVVGLNDVNNDGLNDLVLQYDVNGERRWQARLSNGTSFNLAG 1613
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 71/545 (13%), Positives = 138/545 (25%), Gaps = 72/545 (13%)
Query: 67 DLTFEETSIHSDIKFISSNNGYVCT---------------PRYDSRYFMEINFDKADVWR 111
++ F +T+ N ++ F+ I + D+
Sbjct: 729 NIDFNQTTAFGAATITGLNGLVTFADAELYLDSDEFSLNIEQFGFGNFLAIQDVELDLNF 788
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
+ S + + +G + N G + V ++ +S+ ++
Sbjct: 789 SSQNPSALGSGDLVF-LGQRIAGGSFEISNNGILIEDVSLNFGIAGISIPELSFNTNTNT 847
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
Q+I GA G++ I S TI D +
Sbjct: 848 FTAQGNVSLFG---------QQIAGASVSYNGSDQLNINGSLSLSTTFGTIAGINVDSTI 898
Query: 232 DLTLIGGVKNY-IDLNTE--SWSSIGGYEKNMTI--------------AQHTVIESVVGS 274
G ++ IDL S G + +I A VI+
Sbjct: 899 YFDTQGNFEDVGIDLGFTFAGQSFQTGEIRGSSILDIILDVIVGPVIEAVEAVIDFAEDL 958
Query: 275 SGNDVVIGNSANNVFFE------SSGNDVFDGSSG--LDTFFYYAPSYLYKIYRFENAII 326
+ + V ++A N + N+V + + D + Y +A
Sbjct: 959 AEDVVAFVDTAINQISGVVNTISNEFNNVINEIADFFEDFANAVNEFFTGDYYGNNSAET 1018
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVK------QRSILEYTASYEDLIQVIGQDVF 380
+ + D+ + + D+ V + A + L G D
Sbjct: 1019 IVGGSTFYGDYNNYIFAEGGNDRVDAGVGNDLVRGGFGHDYIYGNAGNDSLHGDQGNDTL 1078
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ ++G D +D+ + + G D + +G + +
Sbjct: 1079 YGGSGYDLLEGNDGNDTFYDT------WATIYGHSGFDTLISNYSSFNNGYGIHLHYLNY 1132
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
L + E LI + G D D L G
Sbjct: 1133 NDLRSRGTGEVLILFSGIESFHISGTIYDDILIGGNNQ-----DQLKGNAGNDLLEGKGG 1187
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
+D G + L H+ L + G D GY
Sbjct: 1188 NDILL-----GDAGNDTLKGGTGNDTLNGGDGHDSLDGGDGNDLLEGGTGNDILLASGYA 1242
Query: 561 EGRSI 565
++
Sbjct: 1243 GNDTL 1247
Score = 42.5 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 47/149 (31%), Gaps = 5/149 (3%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G S G+ Y + + D D +L G + L+ + +I
Sbjct: 1866 GTAFISNGDWTYTSNLTAEFFDINDVNNDGLKDLILQYDRNGERYQQVRLSDGNSFNISQ 1925
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
T V + + G GND + G +++V +G D G G DTF L
Sbjct: 1926 GNLQET-GFIAVDDLLDGGDGNDNLNGGISDDVLIGGTGIDTLTGGEGADTFVLELRDSL 1984
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ ++ L ++
Sbjct: 1985 NGKTD----ELTDFSSAEGDRLLININEF 2009
>gi|148360702|ref|YP_001251909.1| hypothetical protein LPC_2649 [Legionella pneumophila str. Corby]
gi|148282475|gb|ABQ56563.1| hypothetical protein LPC_2649 [Legionella pneumophila str. Corby]
Length = 6289
Score = 104 bits (258), Expect = 6e-20, Method: Composition-based stats.
Identities = 59/435 (13%), Positives = 119/435 (27%), Gaps = 6/435 (1%)
Query: 37 THRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS 96
T+ ++ +++ L+ + + + S + N Y TP +
Sbjct: 5281 TYTVNANLSSLSTSGSATQGSNTHSYDNSTHVLTVTISTGESLTIDMDNGSYTFTP--PA 5338
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNA-LHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
IN V G G + + G L+ D +
Sbjct: 5339 NITSSINRIINYVLVDGDGDTAAATITFNIDISGFNDPLVVRDDLVLTNQPAVSGQDVIS 5398
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
+ + +S + A + S + Y
Sbjct: 5399 IPTWALLANDTGGSGVSSVSSVTQPVAEGTVVLNAGSVAFTEESNSAADGTYNGSTSDPF 5458
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
T S +DL +N +D S +G N TI + + ++G
Sbjct: 5459 RYTNTTGSQSA-TAKVDLDRTQAGENRLDGTYRSEILLGRDTSNDTIIGNDGNDILIGLG 5517
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + G + +++ +GND DG +G DT Y + + ++
Sbjct: 5518 GNDTLSGGNGDDILAGGAGNDTLDGGAGNDTATYIDATAGVTVSLNTSSAQNTVG--AGT 5575
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D L+++E L + + ++ + + + G D + G
Sbjct: 5576 DTLTNIENLTGSKFNDTLTGNNSANTIKGLEGNDTISGLGGNDTLDGGSGDDVIIGGLGD 5635
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
DI S A V + + ++ + N
Sbjct: 5636 DILTGGSGADQFVLVKGQGGASAGAAPIDTITDFEVNIDKIVINGNNITGVSVSTPVSNT 5695
Query: 456 FADAPDLVQVGKDHF 470
+ + +HF
Sbjct: 5696 YTITVNYSDAATEHF 5710
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND++ G + N+ GND G G+DTFF+ + + D
Sbjct: 6140 LNGGNGNDILHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDD------GGVDTITDF 6193
Query: 331 NEHKQDFLSDVERLRFAD 348
+ D SD L +D
Sbjct: 6194 KANPVDKSSDASVLNLSD 6211
>gi|119384856|ref|YP_915912.1| hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
gi|119374623|gb|ABL70216.1| Hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
Length = 946
Score = 104 bits (258), Expect = 7e-20, Method: Composition-based stats.
Identities = 77/554 (13%), Positives = 138/554 (24%), Gaps = 45/554 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + AD R G G T+ + + G
Sbjct: 339 YGGDGNDRLFGGKGNDLLNGGNGNDYLVGGAGADTLRGGAGNDTLAGGDGNDLLFGGAGN 398
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
S G +YG D + + Y + ++ G+ + + ++
Sbjct: 399 DSLTSGAGADTLYGEGGDDTLAGYAGNDRLYGGAGNDLLLGGAGHDSLVGGAGNDTLRGE 458
Query: 195 YGAPKGSLGNNIY-----KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYID 244
G + G+ T+Y GG+D L + L GG N +
Sbjct: 459 AGNDTLAGGDGNDLLFGGTGNDSLTGGAGADTLYGDGGNDTLAGYAGNDHLFGGAGNDLL 518
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L S+ G N T+ +++ G GND++ G + ++ +G+D G G
Sbjct: 519 LGGTGHDSLVGGAGNDTLRGEAGNDTLAGGDGNDLLFGGAGHDSLTSGAGDDTLYGDGGN 578
Query: 305 DTF----------------FYYAPSYLYKIYRFENAIIVYDA-------NEHKQDFLSD- 340
DT + + + + + + D L
Sbjct: 579 DTLAGYAGNDRVFGGDGNDLLFGGAGHDSLVGGAGSDTLRGGEGNDTLAGGNGNDTLWGE 638
Query: 341 --VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ L+ L Y+ L G D+ + G D+
Sbjct: 639 AGDDLLQGDAGDDLLEGGPGNDTLLGGEGYDRLRGGEGNDMLMGGRGHDTLYGESGADVL 698
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+ Y Y G AL ++ +
Sbjct: 699 HGDEGHDLLYGGDGGDTLFGGADNDTLYGQAGDDSLSGGPGNDALYGGFGNDTVHGGDGH 758
Query: 459 APDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
G D G + + D D+L G D + G
Sbjct: 759 DLIEGGPGNDMLYGDGGSDTLLGGLGDDFLDGGDGNDELHGGLGGDTLS-----GGAGHD 813
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSY 576
L H+ + + + G D + G F+ L
Sbjct: 814 SLFGDAGDDLLGGGDGHDLIEGGDGNDTLVGGRGCD--TLVGGLGADVFVFSAPEDLDGS 871
Query: 577 DDLWNVFGSDRSAA 590
D+ F S
Sbjct: 872 TDVILDFTSGEDKI 885
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/342 (14%), Positives = 92/342 (26%), Gaps = 25/342 (7%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+++ G +N T+ V G +G+D+++G + + + GND +G D +
Sbjct: 282 TTVTGTPRNDTLRAGRNGSDVFGQAGHDLLLGGLGEDRLYGALGNDTLEGRDSNDQLY-- 339
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+++ + ++ N + + + LR +L A +
Sbjct: 340 GGDGNDRLFGGKGNDLLNGGNGNDYLVGGAGADTLRGGAGNDTLAGGDGNDLLFGGAGND 399
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G D G D LY G+ +DL
Sbjct: 400 SLTSGAGADTLYGEGGDDTLAGYAGND-----RLYGGAGNDLLLGGAGHDSLV----GGA 450
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G R L ++ L + G D G + +
Sbjct: 451 GNDTLRGEAGNDTLAGGDGNDLLFGGTGNDSLTGGAGADTLYGDGGNDTLAGYAGNDHLF 510
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
G + + G+ + G R L ++ L A
Sbjct: 511 GGAGNDLLLGGTGHDSLV---GGAGNDTLRGEAGNDTLAGGDGNDLLFGGAGHDSLTSGA 567
Query: 550 GKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA 591
G D G + L Y VFG D +
Sbjct: 568 GDDTLYGDGGNDT----------LAGYAGNDRVFGGDGNDLL 599
Score = 44.8 bits (104), Expect = 0.043, Method: Composition-based stats.
Identities = 45/302 (14%), Positives = 82/302 (27%), Gaps = 24/302 (7%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFYYAPSYLYKIYRFEN 323
G+ GND+++ ++ +G+D+ G +G DTF + I FE
Sbjct: 154 GTGGNDMMMASAGTRGLDGGAGDDILIAGGSPVQMTGGAGADTFVPMEVNGKITITDFEP 213
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE-YTASYEDLIQVIGQDVFES 382
+ D + + +V +L F + S++ T L +
Sbjct: 214 GVDRLDLSFLG--MIRNVGQLGFRPESYGIRIFYGNSVIWVMTRDNTMLQASAFDNSLFP 271
Query: 383 MKHFY------EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+ H+ + D + + R Y G
Sbjct: 272 IAHYAPPDMRTTVTGTPRNDTLRAGRNGSDVFGQAGHDLLLGGLGEDRLYGALGNDTLEG 331
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDD 494
D+ L ++ L + G D+ + D+ D
Sbjct: 332 RDSNDQLYGGDGNDRLFGGKGNDLLNGGNGNDYLVGGAGADTLRGGAGNDTLAGGDGNDL 391
Query: 495 LRNVFGSDR----GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
L G+D A Y G L A ++ L+ + AG
Sbjct: 392 LFGGAGNDSLTSGAGADTLYGEGGDDTLAGYAGNDRLYGGAGNDLLLGGAGHDSLVGGAG 451
Query: 551 KD 552
D
Sbjct: 452 ND 453
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 92/307 (29%), Gaps = 12/307 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + T ++ + D+ G G T+L + G
Sbjct: 619 GGEGNDTLAGGNGNDTLWGEAGDDLLQGDAGDDLLEGGPGNDTLLGGEGYDRLRGGEGND 678
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G +YG + Y D FG + +
Sbjct: 679 MLMGGRGHDTLYGESGADVLHGDEGHDLLYGGD---GGDTLFGGADNDTLYGQAGDDSLS 735
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G P + I G+D+L G + L + G
Sbjct: 736 GGPGNDALYGGFG-NDTVHGGDGHDLIEGGPGNDML----YGDGGSDTLLGGLGDDFLDG 790
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N + +++ G +G+D + G++ +++ G+D+ +G G DT
Sbjct: 791 GDGNDELHGGLGGDTLSGGAGHDSLFGDAGDDLLGGGDGHDLIEGGDGNDTLV--GGRGC 848
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL--EYTASYEDLIQ 373
+ A + + D +DV + + ++ + + + +S + +I
Sbjct: 849 DTLVGGLGADVFVFSAPEDLDGSTDVILDFTSGEDKIDLSGLGLTSIGTDDFSSSDIVIS 908
Query: 374 VIGQDVF 380
V+G D F
Sbjct: 909 VLGPDFF 915
>gi|300865764|ref|ZP_07110521.1| putative Hemolysin-type calcium-binding region protein
[Oscillatoria sp. PCC 6506]
gi|300336246|emb|CBN55674.1| putative Hemolysin-type calcium-binding region protein
[Oscillatoria sp. PCC 6506]
Length = 298
Score = 104 bits (258), Expect = 7e-20, Method: Composition-based stats.
Identities = 61/243 (25%), Positives = 95/243 (39%), Gaps = 22/243 (9%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
F Y+ ++ D+ A A+ V G DHF+ FG E R FD+ YL + D+
Sbjct: 6 SLFDNAFYLENNPDVGLAIANG--KVSSGFDHFNRFGKFEDRDPNILFDTSYYLETNTDV 63
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ AA H+I G E RNP+ F Y +++ D+ A + +H+
Sbjct: 64 AAAVEEGKITAADHFIRFGQFERRNPNPLFDTAFYGSNNPDVTAAVQRNQLTLA---EHY 120
Query: 555 SNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGRALGISGMQ 611
G E R + F+PD YL Y + + A +HY+ G++E
Sbjct: 121 LKLGQFENRQPSLLFDPDYYLQKYPLVATAVNNGVVKSAFEHYLRFGLEETLVSVPPTQS 180
Query: 612 --FKSVMNLSEKSRDKADLSLSFDHKKVDLY---------TDYFGDGNYYDSDLYSMHDI 660
S +L + D + VD+Y DG D+D+ + DI
Sbjct: 181 EDLTSARSLGVLDGIQGVSDFVGDTEPVDIYSFLLNSPSNFSLTLDGLSADADVELLQDI 240
Query: 661 NHD 663
N D
Sbjct: 241 NRD 243
Score = 84.5 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 65/167 (38%), Gaps = 9/167 (5%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
+ + + + + V HF FG E RD FD+ YL + D+
Sbjct: 7 LFDNAFYLENNPDVGLAIANGKVSSGFDHFNRFGKFEDRDPNILFDTSYYLETNTDVAAA 66
Query: 415 FGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ AA H+I G E RNP+ F Y +++ D+ A + +H+
Sbjct: 67 VEEGKITAADHFIRFGQFERRNPNPLFDTAFYGSNNPDVTAAVQRNQLTLA---EHYLKL 123
Query: 474 GCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKE 517
G E R + FD YL Y + + +A HY+ G++E
Sbjct: 124 GQFENRQPSLLFDPDYYLQKYPLVATAVNNGVVKSAFEHYLRFGLEE 170
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 12/142 (8%)
Query: 302 SGLDTFFYYAPSYL-------YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
SG D F + Y E V A E + +D +RF +
Sbjct: 31 SGFDHFNRFGKFEDRDPNILFDTSYYLETNTDVAAAVEEGKITAAD-HFIRFGQFERRNP 89
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLR 412
N + ++ D+ + ++ +H+ + G E R FD YL Y +
Sbjct: 90 NPLFDTAFYG-SNNPDVTAAVQRNQLTLAEHYLKLGQFENRQPSLLFDPDYYLQKYPLVA 148
Query: 413 NVFGSDRG-AAARHYITHGVKE 433
+ +A HY+ G++E
Sbjct: 149 TAVNNGVVKSAFEHYLRFGLEE 170
>gi|163796443|ref|ZP_02190403.1| type I secretion target repeat protein [alpha proteobacterium
BAL199]
gi|159178293|gb|EDP62837.1| type I secretion target repeat protein [alpha proteobacterium
BAL199]
Length = 565
Score = 103 bits (257), Expect = 8e-20, Method: Composition-based stats.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
S+ D N + Q G ++ + F Y Y+ SY D+ + + + A
Sbjct: 235 SNPDPANGTSRYYLFNQEGSLNYFLGRYLDPE---FSGYEYVASYGDIESAYAGNPAGAR 291
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
H I G EGR F LEY+AS+ DL+ A A H+ N G EGRS TF
Sbjct: 292 SHLINSGAYEGREVT-FDGLEYVASYSDLMAALGTD---RAAAATHYMNSGRYEGRSTTF 347
Query: 568 NPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
+ + YL +Y DL VFG++ +AA +HYI+ G EGR+
Sbjct: 348 DGESYLAAYADLRGVFGNNVAAATRHYISSGYAEGRS 384
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 51/108 (47%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
LEY ASY DL+ +G D + H+ G EGR TFD YL +Y DLR VFG++
Sbjct: 307 FDGLEYVASYSDLMAALGTDRAAAATHYMNSGRYEGRSTTFDGESYLAAYADLRGVFGNN 366
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
AA RHYI+ G EGR+P + A DL
Sbjct: 367 VAAATRHYISSGYAEGRSPTGGGGGGGGGTDTGTPAVSEGATDLPANS 414
>gi|188581753|ref|YP_001925198.1| Hemolysin-type calcium-binding region [Methylobacterium populi
BJ001]
gi|179345251|gb|ACB80663.1| Hemolysin-type calcium-binding region [Methylobacterium populi
BJ001]
Length = 361
Score = 103 bits (257), Expect = 8e-20, Method: Composition-based stats.
Identities = 71/382 (18%), Positives = 131/382 (34%), Gaps = 30/382 (7%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
G G +L+ +I LGL +D +D+ V ++
Sbjct: 4 ISGTNVGNVLTGTLDDDI--ILGLSGNDVITDPGGFNRIDGQDGDDTITGGVDLDYIAGG 61
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYG--APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
D +G + IYG + GN E + G
Sbjct: 62 PGNDTIYGGNGFDQIIGEAGNDTIYGQDGNDYAAGN---PGEDVLYGGQGDDFLVGEQGL 118
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
DL+ G N E S+ G + + +++ G +GND + G+ N+
Sbjct: 119 DLV----FGEDGNDFVAGGEDDDSVHGGNGDDLVDGDLGNDTLYGDAGNDTLFGDFGNDQ 174
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ +G + DG++GLDT + + + + + D + + E F+D
Sbjct: 175 MWGGTGTNTLDGAAGLDTAVFDFSFAQAGV--TSSGTLSVITGANSVDTVKNTEAFAFSD 232
Query: 349 QCI--DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ I N + + + ++ +HF ++G EGR+ ++
Sbjct: 233 RTILQADGNAAVDDLFYLSQYRDVYQNG-----NDAEQHFRDYGWKEGRNPN--AFFDTK 285
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQV 465
Y + +HY+T+G KEGR+P F Y+A++ D+ +
Sbjct: 286 GYLAAYADVAAAGIDPLQHYLTYGWKEGRDPSTQFDTKAYLAAYGDVAAEGINPLL---- 341
Query: 466 GKDHFSNFGCEEGRFVTFDSYL 487
H+ +G EGR D
Sbjct: 342 ---HYLQYGAVEGRTTFNDGTF 360
Score = 99.1 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 67/365 (18%), Positives = 119/365 (32%), Gaps = 26/365 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ I D GG + +D G + I G N TI +
Sbjct: 19 DDIILGLSGNDVITDPGGFNRID----GQDGDDTITGGVDLDYIAGGPGNDTIYGGNGFD 74
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++G +GND + G N+ + G DV G G D F L ++ + V
Sbjct: 75 QIIGEAGNDTIYGQDGNDYAAGNPGEDVLYGGQGDD--FLVGEQGLDLVFGEDGNDFVAG 132
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + + L A + L G D
Sbjct: 133 GEDDD--------SVHGGNGDDLVDGDLGNDTLYGDAGNDTLFGDFGNDQMWGGTGTNTL 184
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+ G D + + + GA + + + + + A+
Sbjct: 185 DGAAGLDTAVFDFSFAQAGVTSSGTLSVITGANSVDTVKNTEAFAFSDRTILQADGNAAV 244
Query: 450 EDL--INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+DL ++ + D + HF ++G +EGR +++ Y +
Sbjct: 245 DDLFYLSQYRDVYQNGNDAEQHFRDYGWKEGRNP--NAFFDTKGYLAAYADVAAAGIDPL 302
Query: 508 RHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+HY+T+G KEGR+P F Y+A++ D+ A P L H+ +G EGR+
Sbjct: 303 QHYLTYGWKEGRDPSTQFDTKAYLAAYGDV-AAEGINPLL------HYLQYGAVEGRTTF 355
Query: 567 FNPDL 571
+
Sbjct: 356 NDGTF 360
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 65/366 (17%), Positives = 107/366 (29%), Gaps = 53/366 (14%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTF----------------FYYAPSYLYKIYRF 321
+ G + NV + +D+ G SG D L I
Sbjct: 2 ATISGTNVGNVLTGTLDDDIILGLSGNDVITDPGGFNRIDGQDGDDTITGGVDLDYIAGG 61
Query: 322 ENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+Y N Q + + + D + +L + L+ G D+
Sbjct: 62 PGNDTIYGGNGFDQIIGEAGNDTIYGQDGNDYAAGNPGEDVLYGGQGDDFLVGEQGLDLV 121
Query: 381 ESMKHFYEFGLSEGR--------------DITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
E D+ D+ D L FG+D+
Sbjct: 122 FGEDGNDFVAGGEDDDSVHGGNGDDLVDGDLGNDTLYGDAGNDTLFGDFGNDQMWGGTGT 181
Query: 427 ITHGVKEGRNPDAFKALEYIASHED------LINAFADAPDLVQVGKDHFSNFGCEEGRF 480
T G + F A + A + +
Sbjct: 182 NTLDGAAGLDTAVFDFSFAQAGVTSSGTLSVITGANSVDTVKNTEAFAFSDRTILQADGN 241
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
D YL Y D+ A +H+ +G KEGRNP+AF + + + A
Sbjct: 242 AAVDDLFYLSQYRDVYQNG----NDAEQHFRDYGWKEGRNPNAFFDTKGYLAAYADVAAA 297
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
P H+ +G++EGR + F+ YL +Y D+ ++ HY+ +G
Sbjct: 298 GIDPL------QHYLTYGWKEGRDPSTQFDTKAYLAAYGDV----AAEGINPLLHYLQYG 347
Query: 599 MKEGRA 604
EGR
Sbjct: 348 AVEGRT 353
>gi|163735156|ref|ZP_02142592.1| iron-regulated protein frpC, putative [Roseobacter litoralis Och 149]
gi|161391614|gb|EDQ15947.1| iron-regulated protein frpC, putative [Roseobacter litoralis Och 149]
Length = 2672
Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 79/262 (30%), Gaps = 7/262 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ ++ GG+D + +G + + + G + N +I T
Sbjct: 2295 GTDDTVIGHDGKDQLFGFGGNDRI----LGLEGDDMLSGGSGNDRLNGGDGNDSIEGGTG 2350
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G +G+D++ G ++ S G+D +G +G D + I E V
Sbjct: 2351 DDVLFGKAGDDMLDGGEGDDELIGSDGDDEINGQAGDDLLR--GGAGNDTIEGGEGDDTV 2408
Query: 328 YDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ N+ + L +L + L G D
Sbjct: 2409 FGGNDDDIINGGVGDDMLGGNGGNDTINGGSGDDMLIGGLDSDVLDGGDGADELRGGGGD 2468
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
+G D+ F S+ Y N + + G R D F L+
Sbjct: 2469 DTLFGGDGDDVMFGSFNDDVLYGGAGNDVLNGNTQVDLLFGEAGNDILRGGDGFDTLDGG 2528
Query: 447 ASHEDLINAFADAPDLVQVGKD 468
A ++ L G+D
Sbjct: 2529 AGNDTLEGGNGKDILNGGSGQD 2550
Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/354 (16%), Positives = 97/354 (27%), Gaps = 24/354 (6%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ S + D GK + I L
Sbjct: 2263 VNPASQTAIVFDPTRVDVFFDDQGDPIALGGLGTDDTVIGHDGKDQLFGFGGNDRI---L 2319
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
GL +GG ++ NDS + D FG M+
Sbjct: 2320 GLEGDDMLSGGSGNDRLNGGDGNDSI---------EGGTGDDVLFGKAGDDMLDGGEGDD 2370
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
++ G+ N + + TI GDD + GG + I
Sbjct: 2371 ELIGSDGDDEINGQAG-DDLLRGGAGNDTIEGGEGDDTV----FGGNDDDIINGGVGDDM 2425
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+GG N TI + + ++G +DV+ G + G+D G G D +
Sbjct: 2426 LGGNGGNDTINGGSGDDMLIGGLDSDVLDGGDGADELRGGGGDDTLFGGDGDD--VMFGS 2483
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+Y ++ + D L + + LR D LE +
Sbjct: 2484 FNDDVLYGGAGNDVL--NGNTQVDLLFGEAGNDILRGGDGFDTLDGGAGNDTLEGGNGKD 2541
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
L GQD+ F + D F S + +D + G +
Sbjct: 2542 ILNGGSGQDILRGQAQNDTFVFANASDSAFGSADLIDGFDGVGIQGGDVIDLSL 2595
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 78/228 (34%), Gaps = 15/228 (6%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTL--------------IGGVKNYIDLNTESWS 251
D TI+ G D + + G +N I L++ +
Sbjct: 1006 TVTGSGGLADLAPGMTIFGGEGVDTIGVAGNVDLQVSTGPLGVTFTGFENVIRLDSGA-G 1064
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + T ++G G D+++G + N+V G DV DG +G DT Y
Sbjct: 1065 TLAGDDGANRLQDSTGDGVLIGRGGADMLLGGAGNDVLIGGLGADVLDGGAGTDTVSYAD 1124
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ I A ++ E + D L D+ER+ + + +E + +
Sbjct: 1125 STTSIFIREVPGAQMLGFRGEAQGDVLIDIERIEGSAFNDLFRGGDRSMTIEGGDGDDRI 1184
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+ G D +E ++ + G+ DL F
Sbjct: 1185 VAGAGNDTIRGGDGDDLLLRAEEGQVSGANVFDGGNGFDLLGGFEGGE 1232
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 52/336 (15%), Positives = 85/336 (25%), Gaps = 64/336 (19%)
Query: 278 DVVIGNSANNVFFESSG-NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
DV + + + G +D G G D F + D
Sbjct: 2279 DVFFDDQGDPIALGGLGTDDTVIGHDGKDQLFGFG----------------------GND 2316
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ +E L + + G DV EG D
Sbjct: 2317 RILGLE------GDDMLSGGSGNDRLNGGDGNDSIEGGTGDDVLFGKAGDDMLDGGEGDD 2370
Query: 397 ITFDSYL--------------YLGSYDDLRNVFGSDRG------------AAARHYITHG 430
S D + G D +G
Sbjct: 2371 ELIGSDGDDEINGQAGDDLLRGGAGNDTIEGGEGDDTVFGGNDDDIINGGVGDDMLGGNG 2430
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG-CEEGRFVTF-DSYLY 488
+ N + + D+++ A +L G D G ++ F +F D LY
Sbjct: 2431 GNDTINGGSGDDMLIGGLDSDVLDGGDGADELRGGGGDDTLFGGDGDDVMFGSFNDDVLY 2490
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
G+ +D+ N + G R D F L+ A ++ L
Sbjct: 2491 GGAGNDVLN----GNTQVDLLFGEAGNDILRGGDGFDTLDGGAGNDTLEGGNGKDILNGG 2546
Query: 549 AGKDHFSNFGYEEGRSITF-NPDLYLTSYDDLWNVF 583
+G+D G + + F N DL + F
Sbjct: 2547 SGQD--ILRGQAQNDTFVFANASDSAFGSADLIDGF 2580
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 81/300 (27%), Gaps = 20/300 (6%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N + + ++G G+D ++G ++ F G D DG +G+D +
Sbjct: 836 NAGNPELRGTAQADVIIGLGGDDRLLGLEGDDTLFPGEGADSVDGGAGVDLVDFSDLIGA 895
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++ + E + V T + L
Sbjct: 896 VLTTGYDGLLPSGVRAGVDVTLDGGTETAAEINSDATAGPVTEVSNVERWRLTDFADVLR 955
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
F ++ + + L G D+ S L + D D G + G
Sbjct: 956 ME--DIAFGALDNLRDVSLLGGNDVVVTSSLGGRTID--APQLTIDLGEGDDRFTVTGSG 1011
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ +A + V D + G F F++ + L S
Sbjct: 1012 GLAD---------LAPGMTIFGGEGVDTIGVAGNVDLQVSTGPLGVTFTGFENVIRLDSG 1062
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G D + GV GR L A ++ LI AG D
Sbjct: 1063 AGTLA--GDDGANRLQDSTGDGVLIGRGGA--DMLLGGAGNDVLIGGLGADVLDGGAGTD 1118
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 75/490 (15%), Positives = 126/490 (25%), Gaps = 43/490 (8%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI----- 128
S+ S + +S++ + E+ AD YG G + A +I
Sbjct: 1386 SLSSSERILSTDTFSNVEGVIGTTRDDELFGAGADEAFYGNGGDDYIEAAAGDDILGFGE 1445
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT-PMVSD 187
G AL + + P +G +++ D + T D
Sbjct: 1446 GQALRDLTDPPGDTAVPSFGRSGGTNAPQNNPTILERLRTLDPDDRVASAAPVTVTGDVD 1505
Query: 188 IVAVQ------KIYGAPKGSLGNNIY--KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
++G + + + D P + I D
Sbjct: 1506 GAGNTRVDWGSFLWGGDGIDTLDLRFDRGLSFLPSDGPAARAIVDLDVAPTNTTINTFTG 1565
Query: 240 -----KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ N +S G N T+ IE+V+G++ +D++ G++ +N G
Sbjct: 1566 ERVVYGTAVFTNPGEDASARGSYVNATLYG---IENVLGTANDDIISGDARDNRIEGGGG 1622
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE------HKQDFLSDVERLRFAD 348
D DG G+DT Y S ++ + V N D ER +D
Sbjct: 1623 ADTMDGRGGMDTASYALASEGVELNLVRDGAGVRLENSGGGTGDAAGDTAVGFERFEGSD 1682
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY---- 404
+ T S++ V E +E R T +Y
Sbjct: 1683 FADTVTLTGPVATGNATLSFDVAHFFPEVTVPGGFPGNDETFPAETRVFTETVPVYDRLL 1742
Query: 405 ----------LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
LG DD+ A V
Sbjct: 1743 TSAIPLVTVSLGDGDDVLTAGAGMPVVADMGDGADTVHLTGVVHDIDLGAGDDMVSVAAL 1802
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ F + G V+F S ++ D A T
Sbjct: 1803 PDGALTGRSAAQRTTFIDGGNG-VDTVSFASDAFVSLQSDGAGRAIVTVAAEPVAIETTA 1861
Query: 515 VKEGRNPDAF 524
R F
Sbjct: 1862 FINSRTFTDF 1871
>gi|149204648|ref|ZP_01881613.1| calcium binding hemolysin protein, putative [Roseovarius sp. TM1035]
gi|149141907|gb|EDM29957.1| calcium binding hemolysin protein, putative [Roseovarius sp. TM1035]
Length = 1736
Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats.
Identities = 79/545 (14%), Positives = 157/545 (28%), Gaps = 48/545 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGG 143
N + + D+ G G T+++ + LG G
Sbjct: 1133 GNALNNMLSGGAGHDSFEGGGGDDILITGAGDDTVVAGAGDDTVVVGLGSKTLDGGSGFD 1192
Query: 144 YPVYGVDNDYENDSFLTSVMSY--------FMPQDSMMDASFGYCAT-PMVSDIVAVQKI 194
+G + N + T + S + D D T + VA+ +
Sbjct: 1193 TLDFGTSSGAINLNLATGIYSGTLIDRAPRWADLDPNGDGIAESDGTEARIFGGVALTPL 1252
Query: 195 ----YGAPKGSLGNNIYKIEVQQKDSPFIQT--------IYDSGGDDLLDLTLIGGVKNY 242
+ + +++ ++ +DS F + SGG + + G +
Sbjct: 1253 DVFEANPSQANSADDLSRVLPTLQDSSFAAFQIALVDVAVATSGGFAGFERVIGGDGNDT 1312
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ +E +GG +++ + + G G+D + ++ GND G +
Sbjct: 1313 VSGTSEGDQILGG-AGRDSLSGLAGNDVLSGGEGDDTLSAGEGDDTLEGGLGNDRLIGGA 1371
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK----Q 358
G D + S +I + ++ + + +D + +E+ RF+D + V
Sbjct: 1372 GFDLAVFTIASTEVRIAQEGTSLSLV--SSEGRDTVDGIEQFRFSDGTLTLAQVLTLPPA 1429
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRN 413
+ T + +I G D + G D F D+ D L
Sbjct: 1430 GRLETGTVGDDTIIGSSGDDTLSAQGGNDSINGLGGNDGVFGEDGNDTLSGGEGNDTLAG 1489
Query: 414 VFGSDRGAAARHYITHGVKEGRN----PDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
G D + + G G + + + + + + G D
Sbjct: 1490 ADGDDDVSGGPGDDSMGGGLGNDTLRGGEGDDIIGAGFGDDSVSGGTGNDVVAGGAGNDT 1549
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYD--DLRNVFGSDRGAAARHYITHGVKEGRN----PDA 523
S + +F + L D+ G D A G EG + D
Sbjct: 1550 LSGGDGNDSMSGSFGNDLIEAGNGADDIGGGTGRDTIDAGAGDDRVGGGEGDDSILGGDG 1609
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVF 583
L ++ + + AG D G F + D+ F
Sbjct: 1610 NDFLAGGGRNDTVDGGAGNDTINAGAGND--VITGGTGADQFVF--SSFFDGEADVITDF 1665
Query: 584 GSDRS 588
+
Sbjct: 1666 EDEID 1670
Score = 96.8 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 62/424 (14%), Positives = 111/424 (26%), Gaps = 42/424 (9%)
Query: 31 KPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVC 90
D L+ + + + A+ FE I D S
Sbjct: 1264 SADDLSRVLPTLQDSSFAAFQIALVDVAVATSGGFAG--FERV-IGGDGNDTVSGTSEGD 1320
Query: 91 TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG-----LMHPGSYNGGYP 145
+ DV G G T+ + + LG
Sbjct: 1321 QILGGAGRDSLSGLAGNDVLSGGEGDDTLSAGEGDDTLEGGLGNDRLIGGAGFDLAVFTI 1380
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
+ + L+ V S ++ T ++ ++ + G++G++
Sbjct: 1381 ASTEVRIAQEGTSLSLVSSEGRDTVDGIEQFRFSDGTLTLAQVLTLPPAGRLETGTVGDD 1440
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
S T+ GG+D ++ + ++ G E N T+A
Sbjct: 1441 T------IIGSSGDDTLSAQGGNDSINGLGGNDGV----FGEDGNDTLSGGEGNDTLAGA 1490
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ V G G+D + G N+ G+D+ G D+
Sbjct: 1491 DGDDDVSGGPGDDSMGGGLGNDTLRGGEGDDIIGAGFGDDSV-------------SGGTG 1537
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A D LS D ++E +D+ G+D ++
Sbjct: 1538 NDVVAGGAGNDTLSG------GDGNDSMSGSFGNDLIEAGNGADDIGGGTGRDTIDAGAG 1591
Query: 386 FYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
G EG D D G D + G+D A G + F
Sbjct: 1592 DDRVGGGEGDDSILGGDGNDFLAGGGRNDTVDGGAGNDTINAGAGNDVITGGTGADQFVF 1651
Query: 441 KALE 444
+
Sbjct: 1652 SSFF 1655
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/333 (12%), Positives = 78/333 (23%), Gaps = 35/333 (10%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS- 313
G N T+ + + G +GND + G + ++ GND DG +G DT Y
Sbjct: 1024 GRGGNDTLRGAEGRDKLYGGAGNDTLEGGADEDLLHGGPGNDRLDGGAGNDTASYTWARP 1083
Query: 314 --------YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
N D L +E + + ++L
Sbjct: 1084 GGLDGAIIADSFGAVTVNLETGSATGAFGTDVLISIENVIGTGADDRLIGNALNNMLSGG 1143
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--------------TFDSYLYLGSYDDL 411
A ++ G D+ + G D FD+ + S +
Sbjct: 1144 AGHDSFEGGGGDDILITGAGDDTVVAGAGDDTVVVGLGSKTLDGGSGFDTLDFGTSSGAI 1203
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ + + A D+ + +
Sbjct: 1204 NLNLATGIYSGTLIDRAPRWADLDPNGDGIAESDGTEARIFGGVALTPLDVFEANPSQAN 1263
Query: 472 NFGCEEGRFVTFDSYLYLG---SYDDLRNVFGSDRGAAARHYITHGV---------KEGR 519
+ T + + D+ R G +
Sbjct: 1264 SADDLSRVLPTLQDSSFAAFQIALVDVAVATSGGFAGFERVIGGDGNDTVSGTSEGDQIL 1323
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+L +A ++ L D G D
Sbjct: 1324 GGAGRDSLSGLAGNDVLSGGEGDDTLSAGEGDD 1356
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/314 (14%), Positives = 86/314 (27%), Gaps = 13/314 (4%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+F +E D G T+ + I
Sbjct: 1405 VDGIEQFRFSDGTLTLAQVLTLPPAGRLETGTVGDDTIIGSSGDDTLSAQGGNDSINGLG 1464
Query: 133 GLMHPGSYNGGYPVYGV--DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G +G + G ++ V DI+
Sbjct: 1465 GNDGVFGEDGNDTLSGGEGNDTLAGADGDDDVSGGPGDDSMGGGLGNDTLRGGEGDDIIG 1524
Query: 191 VQKIYGAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKN 241
+ G GN++ ++ S G+DL+ D G ++
Sbjct: 1525 AGFGDDSVSGGTGNDVVAGGAGNDTLSGGDGNDSMSGSFGNDLIEAGNGADDIGGGTGRD 1584
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
ID +GG E + +I + + G ND V G + N+ +GNDV G
Sbjct: 1585 TIDAGAG-DDRVGGGEGDDSILGGDGNDFLAGGGRNDTVDGGAGNDTINAGAGNDVITGG 1643
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G D F + + + + + D + VE + + V +I
Sbjct: 1644 TGADQFVFSSFFDGEADVITDFEDEIDSFLIRRFDPDTGVENIN-NGGNGLAGFVVAMNI 1702
Query: 362 LEYTASYEDLIQVI 375
+ A + +
Sbjct: 1703 VNTAAGAQMTVNGN 1716
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 49/338 (14%), Positives = 98/338 (28%), Gaps = 28/338 (8%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D ++ GGV D W G + +A + + + G G+D ++G N+V
Sbjct: 331 DTVEDAFFGGVVGNADQGPTGW----GNDVANLLAGDSGDDILDGLDGSDTILGGGGNDV 386
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-ENAIIVYDANEHKQDFLSDVERLRFA 347
+G D+ +G +G D F++ A Y++ R + I+ + + ++ L
Sbjct: 387 LIAGAGYDLLEGGAGNDLFYFGASFTEYELARDPDTGDIIVSHLAPQTAVNTGIDVLV-- 444
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
V LI + G +E + +S +
Sbjct: 445 ALQDGDHVVFTDISFSGADLNNALIGGSVLNG-------DRNGFAEDDLLFLNSTGTPVN 497
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
+ N G + + + N + + +D N +
Sbjct: 498 GFHVANGLGGN-----DRIFGSTLNDQLNGGSGDDVLVPGRGDDQANGGTGTDTFQVLRG 552
Query: 468 DHF-------SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
+ + +GR + S D + G+D Y G+
Sbjct: 553 ANSRLTVDLIAGTSFGQGRDTLSSVENVIASPDQDHKIRGTDGANVI--YTGDGIDVITG 610
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
D ++ + +I AG G
Sbjct: 611 LDGNDTIDAGGEDDYIIGGRGADVINAGAGNTDVMISG 648
Score = 51.7 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 58/468 (12%), Positives = 119/468 (25%), Gaps = 67/468 (14%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T + I D+ G G + E A + G +
Sbjct: 375 SDTILGGGGNDVLIAGAGYDLLEGGAGNDLFYFGASFTEYELA------RDPDTGDIIVS 428
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ V+ D ++ + + + ++ + G G +++
Sbjct: 429 HLAPQTAVNTGIDVLVALQDGDHVVFTDISFSGADLNNALIGGSVLNGDRNGFAEDDLLF 488
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ GG+D +
Sbjct: 489 LNSTGTPVNGFHVANGLGGNDRI------------------------------------- 511
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
GS+ ND + G S ++V G+D +G +G DTF +
Sbjct: 512 ---FGSTLNDQLNGGSGDDVLVPGRGDDQANGGTGTDTFQVLRGANSRLTVDLIAGTSF- 567
Query: 329 DANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+D LS VE + + DQ +++ + + + G D ++
Sbjct: 568 ---GQGRDTLSSVENVIASPDQDHKIRGTDGANVIYTGDGIDVITGLDGNDTIDAGGEDD 624
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G D+ + G+ + G+ + +
Sbjct: 625 YIIGGRGADV-------------INAGAGNTDVMISGSAAQAGISDHYIGGDGFDVVSYT 671
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNF--GCEEGRFVTFDSYLYLGSYDDLRNV-FGSDRG 504
S + I + ++ G E V D+ S DL +D
Sbjct: 672 SSSNTIRFDINDQTDDPSILQQLLSYMDGIEVSGPVRIDAGSGRISRFDLAGNLVTTDTT 731
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
++ + + L + A +D+I+ G D
Sbjct: 732 DGVEGFMGSDLADTLFGAPTARLLHGAGGDDVIHTGGTENIDGGEGDD 779
>gi|291570733|dbj|BAI93005.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 1794
Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 60/203 (29%), Gaps = 10/203 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G I G+D L GG + + L E I G
Sbjct: 1531 GGNDNLEGG---FGNNLLLGGEGNDFILGGPGNDTL----YGGQDDDLLLGGEGNDVIWG 1583
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N TI + + G G+D+++G N++ + GND DG G D F
Sbjct: 1584 DIGNDTIDGGEGDDLIFGGEGDDLILGGLGNDIIYGGQGNDTIDGGEGDDLIF--GNQGD 1641
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
+ + +Y ++ L F + V L + LI
Sbjct: 1642 DYLQGNQGNDTIYGGQDNDTLLGIAGNNLLFGNLGNDLLVGGFASDTLYGGQGNDTLIGG 1701
Query: 375 IGQDVFESMKHFYEFGLSEGRDI 397
G D K GRD
Sbjct: 1702 DGNDFLSGDKGDDVLIGGAGRDT 1724
Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 74/230 (32%), Gaps = 11/230 (4%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ ++IY GG+D + + L GG N + L E I G N T+ +
Sbjct: 1511 GTSIAESIYGRGGNDTIFGMGGNDNLEGGFGNNLLLGGEGNDFILGGPGNDTLYGGQDDD 1570
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++G GNDV+ G+ N+ G+D+ G G D IY + +
Sbjct: 1571 LLLGGEGNDVIWGDIGNDTIDGGEGDDLIFGGEGDDLIL--GGLGNDIIYGGQGNDTIDG 1628
Query: 330 ANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
F + + L+ + L A L +G D+
Sbjct: 1629 GEGDDLIFGNQGDDYLQGNQGNDTIYGGQDNDTLLGIAGNNLLFGNLGNDLLVGGFASDT 1688
Query: 389 FGLSEGRDITF---DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
+G D + G D + G+ R A Y + +
Sbjct: 1689 LYGGQGNDTLIGGDGNDFLSGDKGDDVLIGGAGRDTFAIAYGQDTIADFE 1738
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 70/245 (28%), Gaps = 19/245 (7%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
TL G + + + T SI G N TI +++ G GN++++G N+
Sbjct: 1499 TLEGTEADELKIGTSIAESIYGRGGNDTIFGMGGNDNLEGGFGNNLLLGGEGNDFILGGP 1558
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
GND G D I+ + D + + +
Sbjct: 1559 GNDTLYGGQDDDLLL--GGEGNDVIWGDIGNDTI--------DGGEGDDLIFGGEGDDLI 1608
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ I+ + + G D+ + ++G D + D L
Sbjct: 1609 LGGLGNDIIYGGQGNDTIDGGEGDDLIFGNQGDDYLQGNQGNDTIYGGQ----DNDTLLG 1664
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ G++ + G A L ++ LI + G D
Sbjct: 1665 IAGNNLL-----FGNLGNDLLVGGFASDTLYGGQGNDTLIGGDGNDFLSGDKGDDVLIGG 1719
Query: 474 GCEEG 478
+
Sbjct: 1720 AGRDT 1724
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 51/143 (35%), Gaps = 17/143 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ IY G+D +D GG + + + + G + N TI
Sbjct: 1604 GDDLILGGLGNDIIYGGQGNDTID----GGEGDDLIFGNQGDDYLQGNQGNDTIYGGQDN 1659
Query: 269 ESVVGSSGNDVVIGNSANN---------VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++++G +GN+++ GN N+ + GND G G D F +
Sbjct: 1660 DTLLGIAGNNLLFGNLGNDLLVGGFASDTLYGGQGNDTLIGGDGND--FLSGDKGDDVLI 1717
Query: 320 RFENAIIVYDANEHKQDFLSDVE 342
A + QD ++D E
Sbjct: 1718 GGAGRDT--FAIAYGQDTIADFE 1738
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 68/294 (23%), Gaps = 66/294 (22%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ E++ G+ +++ IG S + GND G G D + E
Sbjct: 1494 NVTQETLEGTEADELKIGTSIAESIYGRGGNDTIFGMGGNDNL--EGGFGNNLLLGGEGN 1551
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + +L + + IG D + +
Sbjct: 1552 DFILGGP-----------------GNDTLYGGQDDDLLLGGEGNDVIWGDIGNDTIDGGE 1594
Query: 385 HFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
EG D+ + +Y G +D + D + + +
Sbjct: 1595 GDDLIFGGEGDDLILGGLGNDIIYGGQGNDTIDGGEGD-----DLIFGNQGDDYLQGNQG 1649
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
Y D + A L + G LY G
Sbjct: 1650 NDTIYGGQDNDTLLGIAGNNLLFGNLGNDLLVGGFAS-------DTLYGGQ--------- 1693
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
L ++ L D + AG+D F
Sbjct: 1694 ----------------------GNDTLIGGDGNDFLSGDKGDDVLIGGAGRDTF 1725
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 29/229 (12%), Positives = 54/229 (23%), Gaps = 31/229 (13%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-- 399
E L + + + + + + G D E EG D
Sbjct: 1498 ETLEGTEADELKIGTSIAESIYGRGGNDTIFGMGGNDNLEGGFGNNLLLGGEGNDFILGG 1557
Query: 400 --DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
+ LY G DDL + + G + + L + +DLI
Sbjct: 1558 PGNDTLYGGQDDDLLLGGEGNDVI----WGDIGN-DTIDGGEGDDLIFGGEGDDLILGGL 1612
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ + + G + YL G
Sbjct: 1613 GNDIIYGGQGNDTIDGGEGDDLIFGNQGDDYLQGN--------------------QGNDT 1652
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
L IA + L + + D + +G + ++
Sbjct: 1653 IYGGQDNDTLLGIAGNNLLFGNLGNDLLVGGFASD--TLYGGQGNDTLI 1699
Score = 41.7 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 31/232 (13%), Positives = 55/232 (23%), Gaps = 53/232 (22%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ D G G I I LG
Sbjct: 1556 GGPGNDTLYGGQDDDLLLGGEGNDVIWGDIGNDTIDGGEGDDLIFGGEGDDLILGGLG-- 1613
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+YG + D + +
Sbjct: 1614 -------NDIIYGGQGNDTIDGGEGDDLIFGNQ--------------------------- 1639
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ + + TIY +D L +G N + + G
Sbjct: 1640 -------------GDDYLQGNQGNDTIYGGQDNDTL----LGIAGNNLLFGNLGNDLLVG 1682
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ T+ ++++G GND + G+ ++V +G D F + G DT
Sbjct: 1683 GFASDTLYGGQGNDTLIGGDGNDFLSGDKGDDVLIGGAGRDTFAIAYGQDTI 1734
>gi|256427107|gb|ACU81101.1| adenylate cyclase toxin [Bordetella pertussis]
Length = 1706
Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats.
Identities = 71/504 (14%), Positives = 131/504 (25%), Gaps = 61/504 (12%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D+ + G TI + LGL +G D
Sbjct: 1138 GSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 1197
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + +LG + Y
Sbjct: 1198 SDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYY------ 1251
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ ++ + + D+L G + + ++ G + + + + + G
Sbjct: 1252 DNVRNVENVIGTSMKDVLI----GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYG 1307
Query: 274 SSGNDVVIGNSANNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GND + G ++ +GND V G G+DT Y I
Sbjct: 1308 DAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGR 1367
Query: 323 NAIIVY------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + +A D +S +E + + Q ++L +
Sbjct: 1368 IGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 1427
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF----GSDRGAAARHY 426
L G DV + GRD + + D N G D
Sbjct: 1428 LAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFS 1487
Query: 427 I-THGVKEGRNPDAFKALEYIAS---HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
G+ G + AS + N + + V +D
Sbjct: 1488 GPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIG------DAG 1541
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
++ L D L G D + L A ++DL D
Sbjct: 1542 ANALNGLAGNDVLSGGAGDDV--------------LLGDEGSDLLSGDAGNDDLFGGQGD 1587
Query: 543 APDLVQAGKDHFSNFGYEEGRSIT 566
L G H + + GR
Sbjct: 1588 DTYLFGVGYGHDTIYESGGGRDTI 1611
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 56/417 (13%), Positives = 97/417 (23%), Gaps = 64/417 (15%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N +I + + G SG+D + G + N+ G + G +G D F
Sbjct: 1013 IIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLG 1072
Query: 313 SYLYKIYRFENAIIVYDA--------------------------------NEHKQDFLSD 340
+ ++ V N D + +
Sbjct: 1073 VWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKN 1132
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+E L + Q + L + + G D+ +G DI
Sbjct: 1133 IENLHGSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQ 1192
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
DD+ G D + + + +A
Sbjct: 1193 DDE--TVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDY 1250
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
++ ++ + +G D G G
Sbjct: 1251 YDNVRNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGD------------GDDLLFG 1298
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLW 580
D L A ++ L D AG D F E +
Sbjct: 1299 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLR-------------- 1344
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKV 637
G D Y G G A G G+ + + + S ++D
Sbjct: 1345 ---GGDGVD-TVDYSQTGAHAGIAAGRIGLGILADLGAGRVDKLGEAGSSAYDTVSG 1397
Score = 81.0 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/340 (13%), Positives = 94/340 (27%), Gaps = 28/340 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ T D D+ G G + + LG G
Sbjct: 1271 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLG-DDTLEGGAGN 1329
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+G E+D V+ D++ Y T + I A + G
Sbjct: 1330 DWFGQTQAREHD-----VLRGGDGVDTVD-----YSQTGAHAGIAAGRIGLGILADLGAG 1379
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ K+ + + ++ L + G + + + G E + +
Sbjct: 1380 RVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVLLG 1439
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------YLY 316
+ + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 1440 GDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFSGPGRGLDAGAKG 1499
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN---------VKQRSILEYTAS 367
+ L ++E + + + + +L A
Sbjct: 1500 VFLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIGDAGANALNGLAGNDVLSGGAG 1559
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ L+ G D+ + +G D Y
Sbjct: 1560 DDVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGVGYGHD 1599
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/365 (11%), Positives = 73/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N IA + G GND + G +++ G D G G D F
Sbjct: 1135 NLHGSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 1194
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 1195 ETVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYYDNV 1254
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+VE + Q + + + L G D+
Sbjct: 1255 RNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 1314
Query: 390 GLSEGRDITFDSYL------YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 1315 YGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGRIGLGILA 1374
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 1375 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 1432
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 1433 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRD 1482
Query: 564 SITFN 568
++ F+
Sbjct: 1483 TVDFS 1487
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/355 (13%), Positives = 87/355 (24%), Gaps = 73/355 (20%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS-HNALHEIGHA-- 131
+ + +F + + DV R G G T+ H G A
Sbjct: 1308 DAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHA-GIAAG 1366
Query: 132 -LGLMHPGSYNGGYPV-YGVDNDYENDSFLTSVMSYFMP--QDSMMDASFGYCATPMVSD 187
+GL G G D+ DA +D
Sbjct: 1367 RIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGAD 1426
Query: 188 IVA----------------------VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
++A ++YG G++ + + +
Sbjct: 1427 VLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGE----AGDD-WFFQDAANAGNLLD---GG 1478
Query: 226 GGDDLLDLTLIGGV------KNYIDLNTE------------------------SWSSIGG 255
G D +D + G ++ L + G
Sbjct: 1479 DGRDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIG 1538
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + + G +G+DV++G+ +++ +GND G G DT+ +
Sbjct: 1539 DAGANALNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGVGYGH 1598
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
IY D L ++ + L Y D
Sbjct: 1599 DTIYESGGGR-DTIRINAGADQLW----FARQGNDLEIRILGTDDALTVHDWYRD 1648
Score = 42.5 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 47/177 (26%), Gaps = 29/177 (16%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVF-DGSSGL-DTFFYYAPSYLYKIYRFENAIIV 327
V+G G+DVV+ N++ + +G + + G D+ A + + + N V
Sbjct: 910 DVIGGDGDDVVLANASRIHYDGGAGTNTVSYAALGRQDSITVSADGERFNVRKQLNNANV 969
Query: 328 Y---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y + D L V+ + +
Sbjct: 970 YREGVATQTTAYGKRTENVQYRHVELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDN 1029
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L + + L G D + G D+ + D +
Sbjct: 1030 FLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVWSNQLDGGAGVDT 1086
>gi|172064168|ref|YP_001811819.1| hemolysin-type calcium-binding region [Burkholderia ambifaria
MC40-6]
gi|171996685|gb|ACB67603.1| Hemolysin-type calcium-binding region [Burkholderia ambifaria
MC40-6]
Length = 1534
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/398 (14%), Positives = 112/398 (28%), Gaps = 46/398 (11%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTI----------YDSGGDDLLDLTLIGGVKNYID------ 244
+N Y I Q + I + G+D+ D ++I+
Sbjct: 550 RDTDNTYWINSSQFIHFGARQIKINNGNRTYLIGTDGNDVFDANYYAAYGHWINSGLLVN 609
Query: 245 -LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L +GG +N + T +++ G G+D + G ++ +GNDV DG SG
Sbjct: 610 FLAGGGDDVMGGSWRNDNLWGGTGNDTLFGYDGDDRLYGEEGDDELQGGAGNDVLDGGSG 669
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL----SDVERLRFADQCIDSVNVKQR 359
D+ F A + + ++ ++ + A+ + L +D + +
Sbjct: 670 NDSLFGQAGNDIMNGGDGDDIMMGFTASNEAKQALAPGETDDDVMYGGAGNDRMWGGLGN 729
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-------------DSYLYLG 406
++ + + G D E EG D D ++ G
Sbjct: 730 DYMDGGDGADLVRGGHGNDTIFGGTGNDELHGDEGNDRLLGEAGHDRIFGEAGDDVIWGG 789
Query: 407 SYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
DD+ F +D A + + AL ++ L D
Sbjct: 790 DGDDVLVGFTADNDAKQTLSWGETDNDALYGGNGNDALYGGLGNDYLDGGNDDDFLDGGE 849
Query: 466 GKDHFSNFGCEE-----------GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
G D + D D + G D
Sbjct: 850 GDDTLFGGAGSDELNGGNGNDVLSGETGNDKIFGGAGNDTIWGGDGDDILVGFTATNDAK 909
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ A ++ ++ + +AG D
Sbjct: 910 QSLAAWETDDDTIYGGAGNDLILGGLGNDLLYGEAGND 947
Score = 94.1 bits (232), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/404 (14%), Positives = 101/404 (25%), Gaps = 22/404 (5%)
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD- 229
+ D FGY + ++ G + + + GDD
Sbjct: 632 TGNDTLFGYDGDDRLYGEEGDDELQGGAGNDVLDGG-SGNDSLFGQAGNDIMNGGDGDDI 690
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
++ T K + + G N + + + G G D+V G N+
Sbjct: 691 MMGFTASNEAKQALAPGETDDDVMYGGAGNDRMWGGLGNDYMDGGDGADLVRGGHGNDTI 750
Query: 290 FESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVY--DANEHKQDFLSD 340
F +GND G G D + + I+ + ++ A+ + LS
Sbjct: 751 FGGTGNDELHGDEGNDRLLGEAGHDRIFGEAGDDVIWGGDGDDVLVGFTADNDAKQTLSW 810
Query: 341 VE----RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
E L + L+ + L G D E G D
Sbjct: 811 GETDNDALYGGNGNDALYGGLGNDYLDGGNDDDFLDGGEGDDTLFGGAGSDELNGGNGND 870
Query: 397 I----TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
+ T + ++ G+ +D D + + Y + DL
Sbjct: 871 VLSGETGNDKIFGGAGNDTIWGGDGDDILVGFTATNDAKQSLAAWETDDDTIYGGAGNDL 930
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRF---VTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
I L + G R D D L G D
Sbjct: 931 ILGGLGNDLLYGEAGNDEIQGGAGHDRLYGGDGNDRLFGQVGNDILYGGAGDDLLVGFTG 990
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
L + L+ + AG DH
Sbjct: 991 DNEEKRTLAPGETDDDYLYGGDGRDTLLGGLGNDYLDGGAGADH 1034
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 57/418 (13%), Positives = 102/418 (24%), Gaps = 47/418 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + T + + D G I I G
Sbjct: 733 DGGDGADLVRGGHGNDTIFGGTGNDELHGDEGNDRLLGEAGHDRIFGEAGDDVIWGGDGD 792
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMS-----YFMPQDSMMDASFGYCATPMVSDIV 189
+ + E D+ + Y + +D
Sbjct: 793 DVLVGFTADNDAKQTLSWGETDNDALYGGNGNDALYGGLGNDYLDGGNDDDFLDGGEGDD 852
Query: 190 AVQKIYGAPKGSLGN-----NIYKIEVQQKDSPFIQTIYDSGGDDLL-DLTLIGGVKNYI 243
+ G+ + + GN + + TI+ GDD+L T K +
Sbjct: 853 TLFGGAGSDELNGGNGNDVLSGETGNDKIFGGAGNDTIWGGDGDDILVGFTATNDAKQSL 912
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+I G N I + + G +GND + G + ++ + GND G G
Sbjct: 913 AAWETDDDTIYGGAGNDLILGGLGNDLLYGEAGNDEIQGGAGHDRLYGGDGNDRLFGQVG 972
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D + A L + +N A D L
Sbjct: 973 NDILYGGAGDDLLVGFTGDNEEKRTLAPGETDD-----------------------DYLY 1009
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ L+ +G D + +G D + G D ++
Sbjct: 1010 GGDGRDTLLGGLGNDYLDGGAGADHMEGGQGNDTYI--VNSVNDVILEYANEGYDTVISS 1067
Query: 424 RHYITHGVKE-----------GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+YI + E G + ++ L + G D +
Sbjct: 1068 ANYILNANIEELRLVEGFDINGTGNALDNVIVGNSADNILDGVTGADTMIGGKGNDTY 1125
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 74/549 (13%), Positives = 143/549 (26%), Gaps = 67/549 (12%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
F ++N+ +++ D+ G+G + EI G
Sbjct: 902 FTATNDAKQSLAAWETDDDTIYGGAGNDLILGGLGNDLLYGEAGNDEIQGGAG----HDR 957
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G + L + D P +D +YG
Sbjct: 958 LYGGDGNDRLFGQVGNDILYGGAGDDLLVGFTGDNEEKRTLAPGETDD---DYLYGGDGR 1014
Query: 201 SLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ + + G+D + ++ E + ++
Sbjct: 1015 ---DTLLGGLGNDYLDGGAGADHMEGGQGNDTYIV--NSVNDVILEYANEGYDTVISSAN 1069
Query: 259 ---NMTIAQHTVIE----SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
N I + ++E + G++ ++V++GNSA+N+ +G D G G DT++
Sbjct: 1070 YILNANIEELRLVEGFDINGTGNALDNVIVGNSADNILDGVTGADTMIGGKGNDTYYVD- 1128
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-----------QCIDSVNVKQRS 360
+ ++ I ++ VE L D + + +
Sbjct: 1129 -NVGDRVVERAGEGIDTVQSKISYALGDHVENLNLLDFGKPEKGLVDGTSVLVYGYPKAN 1187
Query: 361 ILEYTASYED--------------LIQVIGQDVFESM--KHFYEFGLSEGRDITFDSYLY 404
L+Y L+ IG E + + D
Sbjct: 1188 ELDYMQGDAVPTFQGTCALTSIANLLTQIGTPTTEGEVVRRAINNQWAITSPAATDYQRG 1247
Query: 405 LGSYDDLRNVFGSDRG--AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
+Y + + S Y H V L A A+ D+ +
Sbjct: 1248 GSNYVQQQALLKSYGITNNLLAGYDEHAVANLVRSGRGVILALNAGRLWGDGAYLDSGGV 1307
Query: 463 VQVGKDHFSNFGCEEGRFVTF-----------DSYLYLGSYDDLRNVFGSDRGAAARHYI 511
V + +G +G F D Y+ + + A
Sbjct: 1308 NHVVTVTGAVYGEADGVLKGFYIADSGRQRVSDMTRYVSLQEFRSAANVPNSYAIYTAEA 1367
Query: 512 THGVKEGRNPDAFKALEYI---ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
E + I + L + + G D + FG GR +
Sbjct: 1368 LKLWNEDIDGTGNALDNTIIGNRGNNVLDGGAGNDILVGGLGNDTYR-FGRGAGRDTIQD 1426
Query: 569 PDLYLTSYD 577
D L + D
Sbjct: 1427 DDETLGNND 1435
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE----NAIIV 327
G++ ++ +IGN NNV +GND+ G G DT+ + + I + N ++
Sbjct: 1378 TGNALDNTIIGNRGNNVLDGGAGNDILVGGLGNDTYRFGRGAGRDTIQDDDETLGNNDVI 1437
Query: 328 YDANEHKQDFLS 339
D L
Sbjct: 1438 SIGAGVSADQLW 1449
>gi|40063620|gb|AAR38409.1| type I secretion target GGXGXDXXX repeat protein [uncultured marine
bacterium 582]
Length = 2447
Score = 102 bits (253), Expect = 3e-19, Method: Composition-based stats.
Identities = 74/504 (14%), Positives = 132/504 (26%), Gaps = 39/504 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + + T S AD G G T+ + +G G
Sbjct: 95 GSGNDTVVGTAYDHADTVYGGSGNDSLSGGGGADQLSGGDGNDTLYGGSGNDNLGGGGGA 154
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM-----VSDIV 189
+G +YG + Y + ++A +G + +
Sbjct: 155 DKLTGGSGDDTLYGGSGNDSLTGNSGLNQLYGGDGNDTIEAYYGGNTVYGGSGADAVNDI 214
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A+ +YG V F T+Y GDD LD GG +
Sbjct: 215 ALDVVYGGDGNDS--------VVGSAYNFADTVYGGSGDDNLD----GGGVADKLSGGDG 262
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD--------GS 301
++ G N ++ ++ + G GND + N + SG D G
Sbjct: 263 NDTLYGGTGNDSLTGNSGRNQIYGGDGNDTIEAYFGGNTVYGGSGADSIYNIAVDVVYGG 322
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQ 358
G DT A + + A D L S + L
Sbjct: 323 DGNDTVV-GATGGAWNDTVYGGAGNDSLGGGDGADRLYGGSGADTLDGGTGNDTLDGGSG 381
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD----SYLYLGSYDDLRNV 414
L A + L+ +G D G G D L+ G+ DD +
Sbjct: 382 DDQLYGGAGNDILVASVGDDTHYGGAGNDILGGGVGADTLDGGIGKDTLFGGTGDDTLSG 441
Query: 415 FGSD----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
D G+ + + + + + D++ A
Sbjct: 442 GADDDALVGGSGVDTLDGGSGIDTMSGGLGDDVYIVDNASDVVTEAASGGTDEVRSSVTL 501
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
+ E +T + + + N + Y G L
Sbjct: 502 TLETNVENLTLTGAAN--IAGTGNSLNNVITGNSGNNTLYGGSGNDTLYGGSGNDTLYGG 559
Query: 531 ASHEDLINAFADAPDLVQAGKDHF 554
+ ++ + + +G D F
Sbjct: 560 SGNDRIDGGEGNDTIDGGSGDDIF 583
Score = 94.5 bits (233), Expect = 6e-17, Method: Composition-based stats.
Identities = 64/422 (15%), Positives = 105/422 (24%), Gaps = 31/422 (7%)
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
Y D+ + + D +G + D G+ ++ Y
Sbjct: 52 YGRDTIYGGAGNDKIQSYDDRDTVYGGAGADSIYDTALDLVFGGSGNDTVVGTAYDHADT 111
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
++ GG D L GG N ++GG + + +++
Sbjct: 112 VYGGSGNDSLSGGGGADQL----SGGDGNDTLYGGSGNDNLGGGGGADKLTGGSGDDTLY 167
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTF------FYYAPSYLYK 317
G SGND + GNS N + GND G SG D Y
Sbjct: 168 GGSGNDSLTGNSGLNQLYGGDGNDTIEAYYGGNTVYGGSGADAVNDIALDVVYGGDGNDS 227
Query: 318 IYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ D L ++L D L + +
Sbjct: 228 VVGSAYNFADTVYGGSGDDNLDGGGVADKLSGGDGNDTLYGGTGNDSLTGNSGRNQIYGG 287
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFD---SYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D E+ G D ++ +Y G +D V + Y G
Sbjct: 288 DGNDTIEAYFGGNTVYGGSGADSIYNIAVDVVYGGDGNDTV-VGATGGAWNDTVYGGAGN 346
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF-DSYLYLG 490
D L + + L + G D + + D Y G
Sbjct: 347 DSLGGGDGADRLYGGSGADTLDGGTGNDTLDGGSGDDQLYGGAGNDILVASVGDDTHYGG 406
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+ +D+ G L A + L+ +G
Sbjct: 407 AGNDILGGGVGADTLD----GGIGKDTLFGGTGDDTLSGGADDDALVGGSGVDTLDGGSG 462
Query: 551 KD 552
D
Sbjct: 463 ID 464
Score = 92.9 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/426 (11%), Positives = 98/426 (23%), Gaps = 48/426 (11%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
F +T G D G+ I + I
Sbjct: 234 NFADTVYGGSGDDNLDGGGVADKLSGGDGNDTLYGGTGNDSLTGNSGRNQIYGGDGNDTI 293
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYEND-SFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
G +G +Y + D +V+ + + D
Sbjct: 294 EAYFGGNTVYGGSGADSIYNIAVDVVYGGDGNDTVVGATGGAWNDTVYGGAGNDSLGGGD 353
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNY 242
G +Y G+D+L D T GG N
Sbjct: 354 GADRLYGGSGADTLDGGT---GNDTLDGGSGDDQLYGGAGNDILVASVGDDTHYGGAGND 410
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I ++ G T+ T +++ G + +D ++G S + SG D G
Sbjct: 411 ILGGGVGADTLDGGIGKDTLFGGTGDDTLSGGADDDALVGGSGVDTLDGGSGIDTMSGGL 470
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-------------- 348
G D Y + + + + ++VE L
Sbjct: 471 GDD--VYIVDNASDVVTEAASGGTDEVRSSVTLTLETNVENLTLTGAANIAGTGNSLNNV 528
Query: 349 -----------------------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
++ + + G D+F++
Sbjct: 529 ITGNSGNNTLYGGSGNDTLYGGSGNDTLYGGSGNDRIDGGEGNDTIDGGSGDDIFDASSG 588
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
G D +L + + + + +++ + + F
Sbjct: 589 ADTIIGGRGDDTYCVDFLGPIEQVSIEDSKLVEGHSWTDVWVSPANQSNHEKETFSNAWS 648
Query: 446 IASHED 451
+ +E
Sbjct: 649 LQEYES 654
Score = 80.6 bits (197), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/351 (12%), Positives = 83/351 (23%), Gaps = 41/351 (11%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+ +++ ++ +I G N T+ +++ G +GND + + + +G
Sbjct: 22 RAQTQRIVNIGSQGNDNISGSSGNDTLIGGYGRDTIYGGAGNDKIQSYDDRDTVYGGAGA 81
Query: 296 DVFD--------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF- 346
D G SG DT A + +Y + Q D +
Sbjct: 82 DSIYDTALDLVFGGSGNDTVVGTAYDHADTVYGGSGNDSLSGGGGADQLSGGDGNDTLYG 141
Query: 347 ---------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
L + + L G + G +
Sbjct: 142 GSGNDNLGGGGGADKLTGGSGDDTLYGGSGNDSLTGNSGLNQLYGGDGNDTIEAYYGGNT 201
Query: 398 TFD------------SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
+ +Y G +D + A Y G L
Sbjct: 202 VYGGSGADAVNDIALDVVYGGDGNDSVVGSAYNF--ADTVYGGSGDDNLDGGGVADKLSG 259
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS-YLYLGSYDDLRNVFGSDRG 504
++ L + G++ + F +Y GS D D
Sbjct: 260 GDGNDTLYGGTGNDSLTGNSGRNQIYGGDGNDTIEAYFGGNTVYGGSGADSIYNIAVDVV 319
Query: 505 AAARHYITHGVKEGRNPDA---FKALEYIASHEDLINAFADAPDLVQAGKD 552
Y G + A ++ L +G D
Sbjct: 320 -----YGGDGNDTVVGATGGAWNDTVYGGAGNDSLGGGDGADRLYGGSGAD 365
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 77/268 (28%), Gaps = 14/268 (5%)
Query: 225 SGGDDL-LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+ G+D ++ + N + S+ G N T++ T +S+ G GND ++G+
Sbjct: 1918 TKGNDTAINDIIHAYAGNDLVNAGLGNDSVDGGLGNDTLSGQTGDDSLYGGQGNDSLVGD 1977
Query: 284 SANNVFFESSGNDVFDGSSGLDTF--------FYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+ + GND+ G +G DT + S K+ + + ++
Sbjct: 1978 GGQDHLYGGDGNDLLIGGAGKDTLKGGDGNDTYVVDSSTDDKVTDSSGTDEIQSSVQYTL 2037
Query: 336 DFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
S VE L +++ L + G D K +G
Sbjct: 2038 LDASGVENLTLTGTNDSWGTGNVKANVITGNDGNNMLKGLKGTDTLAGAKGDDSLEGGDG 2097
Query: 395 RDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
D + + G+ D D + + Y
Sbjct: 2098 TDSLVGGAGNDLMSGGNGMDTFAEVAGDGSDTISDFKEADADGKGGDFIDLSAFYNKDTL 2157
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEG 478
+N + G +G
Sbjct: 2158 AAVNKAGGTFSDARAMMQKDQEDGHLDG 2185
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/334 (16%), Positives = 91/334 (27%), Gaps = 33/334 (9%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ T + G N T+ + +S+ G SG+D ++G S +++ +
Sbjct: 1227 FETISFKVSATSTSTATGGSDKLVGSAGNNTLEGGSGDDSLYGGSGDDSLVGGSGDDLIY 1286
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSY---------------LYKIYRFENAIIVYDANEHKQ 335
SGND G SG DT + + ++ + +
Sbjct: 1287 GGSGNDTIVGGSGDDTIVGGSGADTIDGGDGTDTYTTTGAIQVSVDGSGSGTVVKADGTT 1346
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D +S VE + D+ + T + D G + FG S
Sbjct: 1347 DSVSSVEAYTGSAGTGDTFSFSDTITDRGTIANLD-DSATGTFTADGGGSTIAFGGS--N 1403
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
T L + + G G AF+ + + S A
Sbjct: 1404 QPTLSDLLNGTNGVTQVLAGAFEITGGDD----TGEIGGIRFQAFETISFKVSATSTSTA 1459
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ LV ++ G D LY GS DD D Y G
Sbjct: 1460 TGGSDKLVGSAGNNTLEGGSG-------DDSLYGGSGDDSLVGGTGDDLI----YGGAGN 1508
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
+L + + D +
Sbjct: 1509 DTLEGGCGEDSLVGGTGDDLVYGGSGDDTLEGGS 1542
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 64/275 (23%), Gaps = 62/275 (22%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ IY G+D L+ GG + + G + T+ +
Sbjct: 1488 SGDDSLVGGTGDDLIYGGAGNDTLE----GGCGEDSLVGGTGDDLVYGGSGDDTLEGGSG 1543
Query: 268 ------------------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+S+ G +G+D ++G + +GND DG +G D +
Sbjct: 1544 ADTIGGGDGDDTIAGGADNDSLYGGNGDDSLVGGIGKDRLDGGNGNDTLDGGTGDDELYG 1603
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
L +
Sbjct: 1604 GF-------------------------------------GNDRLDGSTGNDSLNGGNGND 1626
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G D E + + D+ + G D + + G H +
Sbjct: 1627 RLDGGTGNDTLEGGSGNDIYVVDTKNDVVTEKADEGGD-DIVVAEVDYNLGDHVEHLVLT 1685
Query: 430 GVKE--GRNPDAFKALEYIASHEDLINAFADAPDL 462
G G + + A L D
Sbjct: 1686 GTANLKGTGNSSGNGMAGNAGDNQLNGLGGDDSFA 1720
Score = 41.7 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 28/211 (13%), Positives = 53/211 (25%), Gaps = 11/211 (5%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
SD E+ R Q I ++ + + ++ + LI G+D + + RD
Sbjct: 16 SDAEQTRAQTQRIVNIGSQGNDNISGSSGNDTLIGGYGRDTIYGGAGNDKIQSYDDRDTV 75
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+ YD ++ G G D + + ++ L
Sbjct: 76 YGGAGADSIYDTALDLVFGGSGNDTVV--------GTAYDHADTVYGGSGNDSLSGGGGA 127
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
G D + + G D GS + G+ +
Sbjct: 128 DQLSGGDGNDTLYGGSGNDNLGGGGGADKLTGGSGDDTLYGGSGNDSLT---GNSGLNQL 184
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D +E + A
Sbjct: 185 YGGDGNDTIEAYYGGNTVYGGSGADAVNDIA 215
Score = 39.8 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 57/525 (10%), Positives = 122/525 (23%), Gaps = 46/525 (8%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ + + D G G + + G
Sbjct: 1611 DGSTGNDSLNGGNGNDRLDGGTGNDTLEGGSGNDIYVVDTKNDVVTE--KADEGGDDIVV 1668
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA-----TPMVSDIVAVQKIYGAP 198
V D+ LT + +S + G D AV +
Sbjct: 1669 AEVDYNLGDHVEHLVLTGTANLKGTGNSSGNGMAGNAGDNQLNGLGGDDSFAVSGGSDSI 1728
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE--SWSSIGGY 256
G G+++Y + S + G N+ ++ G
Sbjct: 1729 DGGGGHDVYTNSPDTGLPEIDAILKSSAHIKATIDSTGSGTVAKFGGNSAQIGTDTVSGI 1788
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE-----SSGNDVFDGSSGLDTF-FYY 310
E+ + +T E + D ++ N ++ G + G S TF
Sbjct: 1789 EEFIGSENNTNDEFSYDGAITDRLLVNGIDDNATGTFTPNGGGTPIAFGGSSGVTFSELL 1848
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV---------------- 354
++ + + + E + F I++
Sbjct: 1849 KGDKNGEVAGTFTITAGDKSGQIGDISFKEFETITFEVATIENDIVQGTSGNDTIDAAYD 1908
Query: 355 -------------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ I+ A + + +G D + G D +
Sbjct: 1909 GDPDDDYVDTKGNDTAINDIIHAYAGNDLVNAGLGNDSVDGGLGNDTLSGQTGDDSLYGG 1968
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
D G + D +S +D + + +
Sbjct: 1969 QGNDSLVGDGGQDHLYGGDGNDLLIGGAGKDTLKGGDGNDTYVVDSSTDDKVTDSSGTDE 2028
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
+ + + E +T + + + G+D + G
Sbjct: 2029 IQSSVQYTLLDASGVENLTLTGTNDSWGTGNVKANVITGNDGNNMLKGLKGTDTLAGAKG 2088
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
D +LE + L+ + G D F+ + +I+
Sbjct: 2089 D--DSLEGGDGTDSLVGGAGNDLMSGGNGMDTFAEVAGDGSDTIS 2131
>gi|329851654|ref|ZP_08266411.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328840500|gb|EGF90072.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 669
Score = 102 bits (253), Expect = 3e-19, Method: Composition-based stats.
Identities = 62/410 (15%), Positives = 109/410 (26%), Gaps = 30/410 (7%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
T + G + + + + GS GND + G + +G D G G D
Sbjct: 258 GTAKDDVLRGGDDIDILYGLNGDDILNGSDGNDKLYGGGGIDRLHGGAGADSMFGGDGDD 317
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ S Y E A IVY +VE L+ + T
Sbjct: 318 VYIVDNVSDRVVEYIREGADIVY--ASVSYALSVNVETLKLTGTNDINAT--------GT 367
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ + L G ++ + + EG D F G G+D+ ++
Sbjct: 368 RNGDVLTGNQGANLLDGGAGNDQMQGLEGNDTYFVDAA--GDKVVEMVRAGTDQVVSSVS 425
Query: 426 YITHGVKEGRNPDAFK-ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF- 483
Y E + L+ + G D +
Sbjct: 426 YKLTANVEHLTLTGSALTGTSNDLNNRLLGNAENNTLTALAGDDTLDGGTGADTMAGGLG 485
Query: 484 DSYLYLGSYDDLRNVFGSD-----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
+ Y+ + D + R +A+ + + S+ ++
Sbjct: 486 NDSYYVDNELDKIVEISTGGFEVVRTSASIVLSNYLEDVYIVAAGVISATGNGSNNRMVG 545
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA-AQHYITH 597
D ++G D G F+ L T D F + H +
Sbjct: 546 GAGDNNLTGRSGND--LLTGGAGRDRFVFDSALSATKNLDTVTDFKTRWDQIVLDHLVFT 603
Query: 598 GMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
+ G ++ S D + +D LY D G G
Sbjct: 604 ALDVG--------VGTEKAFVAGTSATSLDHRIIYDSASGALYYDADGTG 645
>gi|291518564|emb|CBK73785.1| Bacterial surface proteins containing Ig-like domains [Butyrivibrio
fibrisolvens 16/4]
Length = 615
Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 60/146 (41%), Gaps = 16/146 (10%)
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA---------- 523
+ FD+ Y D+ FGS A HY G EGR +
Sbjct: 21 STSAPAYAAFDADYYAKQNPDVVAAFGSSAKALENHYNLFGKNEGRAGSSEDLKNSPLRQ 80
Query: 524 -FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F A Y + D++ AF + D A HF FG +EGR I F+ Y +Y DL
Sbjct: 81 LFDASFYAKQNPDVVAAFGNNED---ALFQHFLIFGIKEGRQINQYFDVKAYKAAYPDLS 137
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALG 606
FG + +H++ +G KE R LG
Sbjct: 138 EKFGDNMELYYKHFVAYGQKEHRTLG 163
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT------------FDS 485
AF A Y + D++ AF + ++ H++ FG EGR + FD+
Sbjct: 28 AAFDADYYAKQNPDVVAAFGSSAKALEN---HYNLFGKNEGRAGSSEDLKNSPLRQLFDA 84
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAP 544
Y D+ FG++ A +H++ G+KEGR + F Y A++ DL F D
Sbjct: 85 SFYAKQNPDVVAAFGNNEDALFQHFLIFGIKEGRQINQYFDVKAYKAAYPDLSEKFGDNM 144
Query: 545 DLVQAGKDHFSNFGYEEGRSI 565
+L HF +G +E R++
Sbjct: 145 ELY---YKHFVAYGQKEHRTL 162
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 58/161 (36%), Gaps = 17/161 (10%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI------------TFDSYL 403
Y D++ G H+ FG +EGR FD+
Sbjct: 27 YAAFDADYYAKQNPDVVAAFGSSAKALENHYNLFGKNEGRAGSSEDLKNSPLRQLFDASF 86
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDL 462
Y D+ FG++ A +H++ G+KEGR + F Y A++ DL F D +L
Sbjct: 87 YAKQNPDVVAAFGNNEDALFQHFLIFGIKEGRQINQYFDVKAYKAAYPDLSEKFGDNMEL 146
Query: 463 VQVGKDHFSNFGCEEGR-FVTFDSYLYLGSYDDLRNVFGSD 502
HF +G +E R F S L S +
Sbjct: 147 Y---YKHFVAYGQKEHRTLGGFPSENILPSGKTAVATASAA 184
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 49/145 (33%), Gaps = 4/145 (2%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
Y D++ G + +HF FG+ EGR I FD Y +Y DL F
Sbjct: 81 LFDASFYAKQNPDVVAAFGNNEDALFQHFLIFGIKEGRQINQYFDVKAYKAAYPDLSEKF 140
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
G + +H++ +G KE R F + + S + + + A
Sbjct: 141 GDNMELYYKHFVAYGQKEHRTLGGFPSENILPSGKTAVATASAAKTSGSSSSSSSGGSSS 200
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFG 500
+ D S DL G
Sbjct: 201 KPTPTPAVDPDKTTLS--DLTIAVG 223
>gi|195953945|ref|YP_002122235.1| glycosyl transferase family 2 [Hydrogenobaculum sp. Y04AAS1]
gi|195933557|gb|ACG58257.1| glycosyl transferase family 2 [Hydrogenobaculum sp. Y04AAS1]
Length = 746
Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 56/132 (42%), Gaps = 18/132 (13%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLINAFA 541
FD YL SY D+R HYI HG +EGRNP+ F Y+ +ED+ +
Sbjct: 22 FDERYYLKSYPDIR----LGDIDPIIHYIKHGAREGRNPNPFFDTTFYLNRYEDVAKS-R 76
Query: 542 DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
P L H+ +G +EGR FN YL S D+ HYI HG
Sbjct: 77 INPLL------HYILYGAKEGRWAGPNFNSGFYLLSNPDVKKA----GLNPLLHYILHGQ 126
Query: 600 KEGRALGISGMQ 611
EGR I +
Sbjct: 127 YEGRKAKIETDR 138
Score = 81.4 bits (199), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 18/125 (14%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLINAF 456
FD YL SY D+R HYI HG +EGRNP+ F Y+ +ED+ +
Sbjct: 21 LFDERYYLKSYPDIRLG----DIDPIIHYIKHGAREGRNPNPFFDTTFYLNRYEDVAKSR 76
Query: 457 ADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ H+ +G +EGR F+S YL S D++ + HYI HG
Sbjct: 77 INPLL-------HYILYGAKEGRWAGPNFNSGFYLLSNPDVKKAGLN----PLLHYILHG 125
Query: 515 VKEGR 519
EGR
Sbjct: 126 QYEGR 130
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 55/140 (39%), Gaps = 18/140 (12%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
Y SY D+ + + H+ + G EGR+ FD+ YL Y+D+
Sbjct: 20 GLFDERYYLKSYPDIRLGD----IDPIIHYIKHGAREGRNPNPFFDTTFYLNRYEDVAKS 75
Query: 415 FGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
R HYI +G KEGR F + Y+ S+ D+ A + H+
Sbjct: 76 ----RINPLLHYILYGAKEGRWAGPNFNSGFYLLSNPDVKKAGLNPLL-------HYILH 124
Query: 474 GCEEGRFVTFDSYLYLGSYD 493
G EGR ++ L Y+
Sbjct: 125 GQYEGRKAKIETDRELKLYN 144
>gi|254503616|ref|ZP_05115767.1| von Willebrand factor type A domain protein [Labrenzia alexandrii
DFL-11]
gi|222439687|gb|EEE46366.1| von Willebrand factor type A domain protein [Labrenzia alexandrii
DFL-11]
Length = 609
Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats.
Identities = 76/342 (22%), Positives = 117/342 (34%), Gaps = 56/342 (16%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L + + GG DL E S GG T A + V+ + +++F
Sbjct: 311 LPVLIGGGSSARSDL-EELASRTGGQLFQSTNAAESAA--VLIGAIQSTSTVTDGDDIFT 367
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+G DG G D + + IV + N+ L ++E + D
Sbjct: 368 IVTGIARLDGQKGTDVVTISSNLADVSLSTNRIGEIVLEDNDGTSVILENIEFVLANDGM 427
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
I ++ S FD YL Y D
Sbjct: 428 IMVAPPERAS--------------------------------------FDEAFYLSLYSD 449
Query: 411 LRNVFG--SDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
+ + G + HY+ G+ EGR F Y+ +ED++ A GK
Sbjct: 450 VASAVGTSGGFESGLAHYLQLGIFEGRLGAFPFNEEFYLNENEDILAAVQAGS--FSSGK 507
Query: 468 DHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-F 524
+HF G EGR FD+ YL D+ + A +HY+ G +EGR P F
Sbjct: 508 EHFILHGMFEGRDPVSLFDTEYYLDQNSDVEAAVTAGAITAYQHYLLSGSQEGRRPSNLF 567
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+Y + ++D+ + HF G EGRSI+
Sbjct: 568 SEGDYYSVNQDVA-------VVGIDAFIHFYGMGVAEGRSIS 602
Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/281 (18%), Positives = 92/281 (32%), Gaps = 34/281 (12%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVI--------GQDVFESMKHFYEFGLSEGRDI-----T 398
+ S LI I G D+F + +G D+
Sbjct: 330 SRTGGQLFQSTNAAESAAVLIGAIQSTSTVTDGDDIFTIVTGIARLDGQKGTDVVTISSN 389
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-------NPDAFKALEYIASHED 451
+ + +D + I + +F Y++ + D
Sbjct: 390 LADVSLSTNRIGEIVLEDNDGTSVILENIEFVLANDGMIMVAPPERASFDEAFYLSLYSD 449
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYDDLRNVFGSD-RGAAAR 508
+ +A + + G H+ G EGR F + YL +D+ + +
Sbjct: 450 VASAVGTSG-GFESGLAHYLQLGIFEGRLGAFPFNEEFYLNENEDILAAVQAGSFSSGKE 508
Query: 509 HYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT- 566
H+I HG+ EGR+P F Y+ + D+ A H+ G +EGR +
Sbjct: 509 HFILHGMFEGRDPVSLFDTEYYLDQNSDVEAAV---TAGAITAYQHYLLSGSQEGRRPSN 565
Query: 567 -FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
F+ Y + D+ V A H+ G+ EGR++
Sbjct: 566 LFSEGDYYSVNQDVAVV----GIDAFIHFYGMGVAEGRSIS 602
>gi|17228286|ref|NP_484834.1| outer membrane secretion protein [Nostoc sp. PCC 7120]
gi|17130136|dbj|BAB72748.1| outer membrane secretion protein [Nostoc sp. PCC 7120]
Length = 993
Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats.
Identities = 60/471 (12%), Positives = 128/471 (27%), Gaps = 44/471 (9%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ + + I + + + +Y + +D+++ G N ++ G
Sbjct: 523 SNTLTASITVSPINNPIQGTTGLDKLYGTANEDIIN----GNEGNDYLFGRAGNDTLDGG 578
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FY 309
E N + T +++ G G+D++ GN N++ GND DG +G D Y
Sbjct: 579 EGNDYLFGGTGNDTLDGGEGSDLLYGNEDNDIINGGVGNDNLDGGTGDDILRGGTGNDIY 638
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASY 368
+ I N + +++E L I + + +
Sbjct: 639 TVDTVGDVIEENPNEGTDKVNSYISWTLGANLENLTLLGNTIIDGTGNELDNHIIGNNAV 698
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
L G D G D D L G+D
Sbjct: 699 NRLEGGDGNDWLIGKDGNDILIGGNGNDRLNGETG----EDTLEGGLGNDV--------- 745
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
D+ + A+ + + + V ++ + G + + D
Sbjct: 746 ------YEIDSVGDVIIEAADAGIDTVISSVDWTLGVNLENLTLVGNQATLGIGNDLDNR 799
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
+ + +FG G E D L A +++L + +
Sbjct: 800 ITGNNADNVLFGEAGNDILN--GGAGNDELFGSDGNDILNGGAGNDELFGSDGNDILNGG 857
Query: 549 AGKD-------HFSNFGYEEGRSITFNPDLYLTSYD----DLWNVFGSDRSAAAQHYITH 597
AG D + G S +F + D F ++
Sbjct: 858 AGNDELFGGAGNDILNGGTGADSFSFGNPGNPFNNSDFGIDTVADFAVGVDDIKLDKVSF 917
Query: 598 GMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
+ + ++ ++ + + L+ + G +
Sbjct: 918 SALTSVVGNGFSVGGEFASVSNDTLAAISNGLIVYSLGSGRLFYNQNGSAD 968
>gi|86747929|ref|YP_484425.1| 5'-nucleotidase [Rhodopseudomonas palustris HaA2]
gi|86570957|gb|ABD05514.1| 5'-nucleotidase [Rhodopseudomonas palustris HaA2]
Length = 2667
Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats.
Identities = 56/348 (16%), Positives = 91/348 (26%), Gaps = 37/348 (10%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
DI + + N+ ++ IY S G+D + +
Sbjct: 2306 DIQGQILLGDGNDLLISNDWISTNMEIDGGAGNDEIYTSFGNDTV-------------VG 2352
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG------ 300
E I N TI + + G +GNDV+ G + GNDV +G
Sbjct: 2353 GEGNDRIYANNGNDTIDGGAGDDQLFGQAGNDVIDGGDGADTINGGDGNDVLNGGLGNDL 2412
Query: 301 ---SSGLDTFFYYAPSYLYKIYRFENAIIV------YDANEHKQDFLSDVERLRFADQCI 351
+G DT A + A+ + D S +E F
Sbjct: 2413 IIAGAGDDTIDGGAGFDTLDLSEATGAVTLNLVSGTVSGAGIGTDHFSSIESFVFGAGND 2472
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----TFDSYLYLGS 407
L+ A + + G D + G DI + L GS
Sbjct: 2473 VITGGNGDDSLDGGAGNDTITGGNGNDTLSGGEGNDAIDGGSGNDIVDGGLGNDTLKGGS 2532
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
+D+ D A G L+ + + + + G
Sbjct: 2533 GNDVIAAGDGDDNVDAG----SGDDNVTGGAGNDTLKGGSGADIITGGAGNDILTGGSGA 2588
Query: 468 DHFS-NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
D F G + F + + +D H G
Sbjct: 2589 DVFVFAAGFGKDTVTDFATTGSSADLLQFSSDMFADFADVMAHTAQVG 2636
Score = 87.1 bits (214), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/312 (14%), Positives = 82/312 (26%), Gaps = 10/312 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG-- 133
+ N T + DV G G TI + + LG
Sbjct: 2352 GGEGNDRIYANNGNDTIDGGAGDDQLFGQAGNDVIDGGDGADTINGGDGNDVLNGGLGND 2411
Query: 134 --LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+ G D + ++ + + +
Sbjct: 2412 LIIAGAGDDTIDGGAGFDTLDLSEATGAVTLNLVSGTVSGAGIGTDHFSSIESFVFGAGN 2471
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLN 246
I G + T+ G+D +D + GG+ N
Sbjct: 2472 DVITGGNGDDSLDGGAG-NDTITGGNGNDTLSGGEGNDAIDGGSGNDIVDGGLGNDTLKG 2530
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
I + + + + ++V G +GND + G S ++ +GND+ G SG D
Sbjct: 2531 GSGNDVIAAGDGDDNVDAGSGDDNVTGGAGNDTLKGGSGADIITGGAGNDILTGGSGADV 2590
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F + A + F D + D +D + + S V
Sbjct: 2591 FVFAAGFGKDTVTDFATTGSSADLLQFSSDMFADFADVMAHTAQVGSSVVVTLDADTSIT 2650
Query: 367 SYEDLIQVIGQD 378
+ + D
Sbjct: 2651 LANVQMTSLAAD 2662
Score = 80.2 bits (196), Expect = 9e-13, Method: Composition-based stats.
Identities = 58/383 (15%), Positives = 103/383 (26%), Gaps = 46/383 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + + GDD +++ + ++ I L + I N I+ +
Sbjct: 2276 GNDKLGNTGKIVGDVDLGAGDDFVNIWIGSDIQGQILLGDGNDLLIS----NDWISTNME 2331
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
I+ G +GND + + N+ GND ++G DT + +++ ++
Sbjct: 2332 ID---GGAGNDEIYTSFGNDTVVGGEGNDRIYANNGNDTI--DGGAGDDQLFGQAGNDVI 2386
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D +L + +I G D + F
Sbjct: 2387 DGG-----------------DGADTINGGDGNDVLNGGLGNDLIIAGAGDDTIDGGAGFD 2429
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
LSE T L L S G+D ++ ++ +
Sbjct: 2430 TLDLSE---ATGAVTLNLVSGTVSGAGIGTDHFSSIESFVFGAGNDVITGGNGDDSLDGG 2486
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ D I L + + G D D L+ G+D AA
Sbjct: 2487 AGNDTITGGNGNDTLSGGEGNDAIDGGS------GNDIVDGGLGNDTLKGGSGNDVIAA- 2539
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
G + A ++ L AG D G F
Sbjct: 2540 ----GDGDDNVDAGSGDDNVTGGAGNDTLKGGSGADIITGGAGND--ILTGGSGADVFVF 2593
Query: 568 NPDLYLTSYDDLWNVFGSDRSAA 590
D F + S+A
Sbjct: 2594 AAGFG----KDTVTDFATTGSSA 2612
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/298 (14%), Positives = 85/298 (28%), Gaps = 13/298 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ T+ +GGDD LD GG + L + + G E + ++
Sbjct: 1661 GDDVLTGLGGDDTLVGNGGDDQLD----GGEGDDTLLGGDGDDQLAGGEGDDSLDGGAGD 1716
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G G+D ++G ++V G D +G +G D F + E ++
Sbjct: 1717 DILLGGEGDDTLLGGDGDDVLVGGEGYDTMEGGAGNDEF---TAGAGDSVDGGEGDDLIV 1773
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ + L D + I + ++ G + +
Sbjct: 1774 VSTDDYAPALIDGGDGNDTLKLIGTGTGVIAVSNVVVDVENLVVDG-GSWSVDGSAAYSN 1832
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+ G D T S L + + D + G + I + G + A E S
Sbjct: 1833 I--TIGNDATLTSSLIIDNNDLVGIAAGGTLAVSGNAII---WQGGGDAVLDNAGEIEGS 1887
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
L L + G + + + G
Sbjct: 1888 TRALTTTAGATGSLTVNNQAGGVIRGAVTPQQAGQADATITVNNAGVMEADGRVLDFR 1945
Score = 39.0 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 33/255 (12%), Positives = 66/255 (25%), Gaps = 10/255 (3%)
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G + I+ A D LS+ + ++ +
Sbjct: 2181 RGNEAINLVGTYADSLFNSATGRIVGGVAMGGGNDTLSNDGSITATGGSAVNMGEGDDLL 2240
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFG---LSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ D++ G D + G +G D ++ +G D+ G D
Sbjct: 2241 VNRAVITGDVLLGAGTDELINQSSGVITGDVTFGDGNDKLGNTGKIVG---DVDLGAGDD 2297
Query: 419 RGAAARHYITHG-VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
G + G D + ++I+++ ++ + G D +
Sbjct: 2298 FVNIWIGSDIQGQILLGDGNDLLISNDWISTNMEIDGGAGNDEIYTSFGNDTVVGGEGND 2357
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
R + + +FG G D L ++ +I
Sbjct: 2358 -RIYANNGNDTIDGGAGDDQLFGQAGNDVID--GGDGADTINGGDGNDVLNGGLGNDLII 2414
Query: 538 NAFADAPDLVQAGKD 552
D AG D
Sbjct: 2415 AGAGDDTIDGGAGFD 2429
>gi|307297063|ref|ZP_07576879.1| Cadherin [Sphingobium chlorophenolicum L-1]
gi|306877589|gb|EFN08817.1| Cadherin [Sphingobium chlorophenolicum L-1]
Length = 1245
Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats.
Identities = 64/430 (14%), Positives = 123/430 (28%), Gaps = 30/430 (6%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY- 310
+I G N +I T + + ++ ND + + N+ +G D DG +G D F+
Sbjct: 803 TITGSSGNNSIGPTTGVLAYQTTALNDTIYALAGNDTIDGGAGADYMDGGAGNDIFYVDT 862
Query: 311 -----APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEY 364
++ ++VE+L I+ + +
Sbjct: 863 YSDDGFAGNDDQVIELAGGGSDLVYASVSYRLAANVEKLVLTGAAAINGFGNDLANNITG 922
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSD- 418
+ L +G D+ M + D F D D L G+D
Sbjct: 923 NDAANMLSGGLGADILYGMGGNDVLDGGDDNDNLFGGDGNDVLTGGLGNDYLDGGSGADS 982
Query: 419 --RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
G YI + + + +A A + + + G +
Sbjct: 983 MTGGGGDDSYIVDSWSDDGDSGNDDLIFELAGG-GTDQVNASVSYKLAAEIEKLTLTGID 1041
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA-------RHYITHGVKEGRNPDAFKALEY 529
D + ++G R Y G L+
Sbjct: 1042 NIDGTGNDLANTITGNGGNNGLWGGLGNDTMLGNAGDDRLYGEDGQDSLDGGAGNDLLDG 1101
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF---NPDLYLTSYDDLWNVFGSD 586
A+ + L + + AGKD + G E F + L SYD + + S+
Sbjct: 1102 GAAGDTLKGGAGNDVLIGGAGKD--TLTGGTEADMFVFNRGDTTLNTASYDRITDFKASE 1159
Query: 587 RSAAAQHYITHGM--KEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYF 644
++ + + I+ F + + + ++ ++ D
Sbjct: 1160 GDRIDLDFLNGSLPAVDYAERAIATNVFADALAAANTTAGANHVTFVAGTTDGWVFYDAN 1219
Query: 645 GDGNYYDSDL 654
GDG + S L
Sbjct: 1220 GDGAFDQSVL 1229
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 57/173 (32%), Gaps = 4/173 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + G+D+L N + G N + T +
Sbjct: 221 DDILYGQAGGDNLSGGSGNDILYGDDADTNSNDTLNGDAGNDRLYGGAGNDELYGGTGDD 280
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND + G + N++ +GNDV DGS +DT + Y + +
Sbjct: 281 LLDGGDGNDYMHGGAGNDMILAGAGNDVIDGSGDIDTLVFSGNRMDYIFTLQTDGSFIAV 340
Query: 330 ----ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + +VE +FAD S+ + ++ + ++
Sbjct: 341 DQRAGSPEGSKTIRNVEFFQFADITTSSMALNAPPVITSNGGGATAALAVDEN 393
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 32/267 (11%), Positives = 72/267 (26%), Gaps = 17/267 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+D+ + N + DV G + + + LG
Sbjct: 912 FGNDLANNITGNDAANMLSGGLGADILYGMGGNDVLDGGDDNDNLFGGDGNDVLTGGLGN 971
Query: 135 M--HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP--QDSMMDASFGYCATPMVSDIVA 190
GS G D+ Y DS+ S + + A+
Sbjct: 972 DYLDGGSGADSMTGGGGDDSYIVDSWSDDGDSGNDDLIFELAGGGTDQVNASVSYKLAAE 1031
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
++K+ ++ + + ++ G+D + L
Sbjct: 1032 IEKLTLTGIDNIDGTGNDLANTITGNGGNNGLWGGLGNDTM-------------LGNAGD 1078
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + ++ + + G + D + G + N+V +G D G + D F +
Sbjct: 1079 DRLYGEDGQDSLDGGAGNDLLDGGAAGDTLKGGAGNDVLIGGAGKDTLTGGTEADMFVFN 1138
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDF 337
++ + + D
Sbjct: 1139 RGDTTLNTASYDRITDFKASEGDRIDL 1165
Score = 44.8 bits (104), Expect = 0.046, Method: Composition-based stats.
Identities = 28/210 (13%), Positives = 55/210 (26%), Gaps = 6/210 (2%)
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
++ +G DV GS+ D FY + F+N + + L+
Sbjct: 69 DMLMGGTGTDVIYGSNLSDAIFYNNGAISGGFGSFDNIEQFWLGDGDDIIDLTAHGAGGV 128
Query: 347 ADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ ++ A ++L G D+ + G D+ + L
Sbjct: 129 DYAKDVLVQAGLGNDVIIGGAGKDNLQGDAGDDIIFGWRGGDTISGGAGNDLLYGDD--L 186
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
G + Y G D L A ++L +
Sbjct: 187 GFNGIAGDDVIDGGTGNDILYGGRGSDRMTGGDDDDILYGQAGGDNLSGGSGNDILYGDD 246
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
+ ++ + D D+L
Sbjct: 247 ADTNSNDTLNGD---AGNDRLYGGAGNDEL 273
>gi|46241633|gb|AAS83018.1| hypothetical protein pRhico010 [Azospirillum brasilense]
Length = 1380
Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 77/224 (34%), Gaps = 33/224 (14%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLI 453
FD+ YL +Y +L D A + + G + RNP+ F Y+ + D+
Sbjct: 159 NSGLFDASWYLSTYHELGLTSEED---ALLDFASRGWRAMRNPNADFSTRYYLEQNRDVG 215
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
A + H+ G EGR + D Y + +D HY
Sbjct: 216 AADLNP-------LVHYVAAGDREGRQPSPLLDVAWYRKVHG-----IDADAQTCLAHYR 263
Query: 512 THGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FN 568
H +P F Y+ S+ D+ + A +H+ N+G+ EGR+ + F
Sbjct: 264 AHKQDRRVSPTPYFDPDFYLDSYPDVAQSDAHP-------FEHYMNWGHREGRNPSADFQ 316
Query: 569 PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQF 612
Y Y + S S H++ G G G
Sbjct: 317 TTFYRVLY-----LSASPESNPLLHFLETGKAAGLRTTPGGDIL 355
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 46/259 (17%), Positives = 81/259 (31%), Gaps = 67/259 (25%)
Query: 399 FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNP----DAFKALEYIASHEDL- 452
FD Y D+R S + H++ +G EGR+ + + + +
Sbjct: 66 FDEDAYRKHNPDVREAVESGAYISGFHHWLRYGKAEGRHGWKKEQPAVSEQPVVPAPEEF 125
Query: 453 -------INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
++ A ++ + FD+ YL +Y +L +
Sbjct: 126 QEPRLMEVSTDAAPQEVENSVDSALLSEASIIRNSGLFDASWYLSTYHEL---GLTSEED 182
Query: 506 AARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR- 563
A + + G + RNP+ F Y+ + D+ A + H+ G EGR
Sbjct: 183 ALLDFASRGWRAMRNPNADFSTRYYLEQNRDVGAADLNP-------LVHYVAAGDREGRQ 235
Query: 564 --------------------------------------SITFNPDLYLTSYDDLWNVFGS 585
+ F+PD YL SY D+
Sbjct: 236 PSPLLDVAWYRKVHGIDADAQTCLAHYRAHKQDRRVSPTPYFDPDFYLDSYPDV----AQ 291
Query: 586 DRSAAAQHYITHGMKEGRA 604
+ +HY+ G +EGR
Sbjct: 292 SDAHPFEHYMNWGHREGRN 310
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 41/150 (27%), Gaps = 18/150 (12%)
Query: 374 VIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
I D + H+ FD YL SY D+ HY+ G
Sbjct: 250 GIDADAQTCLAHYRAHKQDRRVSPTPYFDPDFYLDSYPDVAQSDAH----PFEHYMNWGH 305
Query: 432 KEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+EGRNP F+ Y + HF G G T L
Sbjct: 306 REGRNPSADFQTTFYRVLYLSASP--------ESNPLLHFLETGKAAGLRTT-PGGDILD 356
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
+ G A + +H GR
Sbjct: 357 --PAVDKRRFVAPGDAFEEFESHAELAGRE 384
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 5/87 (5%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
+ + +I ++DL+ P + + + + F+ D Y D+
Sbjct: 21 NNIDYVYFINEYKDLV--MGVEPLNKETVLNLYIAGNRTSSLDPSHAFDEDAYRKHNPDV 78
Query: 580 WNVFGSDR-SAAAQHYITHGMKEGRAL 605
S + H++ +G EGR
Sbjct: 79 REAVESGAYISGFHHWLRYGKAEGRHG 105
>gi|58038685|ref|YP_190649.1| hypothetical protein GOX0204 [Gluconobacter oxydans 621H]
gi|58001099|gb|AAW59993.1| Hypothetical protein GOX0204 [Gluconobacter oxydans 621H]
Length = 1260
Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 78/211 (36%), Gaps = 38/211 (18%)
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHED 451
G FD++ YL S DL + A RHY HG +EGR P+ F Y++ + D
Sbjct: 28 LGHSGIFDAFYYLKSNPDLHTL----GTAVLRHYHQHGWREGRKPNPFFDPHWYLSKNRD 83
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARH 509
+I H+ G EGR FD Y +Y +R A H
Sbjct: 84 VI----------GDPLLHYILHGEREGRRPIAWFDPVWYARTY------HVPERMLALAH 127
Query: 510 YITHGVK-EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-- 566
Y+ + R F Y+ ++ D+ A +H+ G+ E R
Sbjct: 128 YLKNRHNTPLRPIPEFDPDFYLRAYPDVAKA-------GLDALEHYMVQGFREARKPFDG 180
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
F+P Y Y L + S S HY+ +
Sbjct: 181 FDPLYYRRKY--LRH---SPDSNPLLHYLEN 206
Score = 99.5 bits (246), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/211 (23%), Positives = 72/211 (34%), Gaps = 38/211 (18%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDD 410
+ Y S DL +G ++H+++ G EGR FD + YL D
Sbjct: 28 LGHSGIFDAFYYLKSNPDLHT-LGT---AVLRHYHQHGWREGRKPNPFFDPHWYLSKNRD 83
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ G HYI HG +EGR P F + Y ++ + H
Sbjct: 84 VI-------GDPLLHYILHGEREGRRPIAWFDPVWYARTY---------HVPERMLALAH 127
Query: 470 FSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKA 526
+ FD YL +Y D+ A HY+ G +E R P D F
Sbjct: 128 YLKNRHNTPLRPIPEFDPDFYLRAYPDVAKAGLD----ALEHYMVQGFREARKPFDGFDP 183
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
L Y + L ++ P L H+
Sbjct: 184 LYYRRKY--LRHSPDSNPLL------HYLEN 206
Score = 92.9 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 61/172 (35%), Gaps = 32/172 (18%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
F A Y+ S+ DL L H+ G EGR FD + YL D
Sbjct: 31 SGIFDAFYYLKSNPDL-------HTLGTAVLRHYHQHGWREGRKPNPFFDPHWYLSKNRD 83
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ G HYI HG +EGR P A F + Y ++ H
Sbjct: 84 VI-------GDPLLHYILHGEREGRRPIAWFDPVWYARTYH---------VPERMLALAH 127
Query: 554 FSNFGYE--EGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+ + F+PD YL +Y D+ A +HY+ G +E R
Sbjct: 128 YLKNRHNTPLRPIPEFDPDFYLRAYPDVAKA----GLDALEHYMVQGFREAR 175
>gi|300866869|ref|ZP_07111544.1| hypothetical protein OSCI_3150008 [Oscillatoria sp. PCC 6506]
gi|300335119|emb|CBN56704.1| hypothetical protein OSCI_3150008 [Oscillatoria sp. PCC 6506]
Length = 830
Score = 101 bits (251), Expect = 5e-19, Method: Composition-based stats.
Identities = 52/215 (24%), Positives = 80/215 (37%), Gaps = 13/215 (6%)
Query: 398 TFDSYLYLGSYDDLRNVFGS-DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD YL Y + + H+ G EG NP A F Y+A + D+
Sbjct: 618 LFDESFYLAQYPQVAAAVANKTFRNGFEHFALFGQYEGLNPSAKFDNQLYLALNPDVAEQ 677
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSD-RGAAARHYIT 512
++ G DHF G +GR ++ YL + + H+I
Sbjct: 678 VSNGVFR--SGFDHFIKRGEFQGRDPRNLYNESYYLEQNSGVATFLSEKKFRSGYEHFIL 735
Query: 513 HGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNP 569
G EGR F Y+ + + A A L +G +HF+ G EGRS + N
Sbjct: 736 FGQFEGRKGSPFFDEQFYLEQNPKVAEAVAS--GLFSSGYEHFTKVGQFEGRSPSTLVNE 793
Query: 570 DLYLTSYDDLWNVFGSDRS-AAAQHYITHGMKEGR 603
YL D+ + + +H++ G +E R
Sbjct: 794 VSYLRDNPDVAVAVKAGVYQSGIEHFVLFGQRENR 828
Score = 95.6 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 96/256 (37%), Gaps = 16/256 (6%)
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
++ + A + DF S F + + Y A Y + +
Sbjct: 580 RVTAVDMNDPGTTAADPGFDFASG---YGFLNADRAMAMLALFDESFYLAQYPQVAAAVA 636
Query: 377 QDVF-ESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLR-NVFGSDRGAAARHYITHGVK 432
F +HF FG EG + + FD+ LYL D+ V + H+I G
Sbjct: 637 NKTFRNGFEHFALFGQYEGLNPSAKFDNQLYLALNPDVAEQVSNGVFRSGFDHFIKRGEF 696
Query: 433 EGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYL 489
+GR+P + Y+ + + ++ + G +HF FG EGR + FD YL
Sbjct: 697 QGRDPRNLYNESYYLEQNSGVATFLSE--KKFRSGYEHFILFGQFEGRKGSPFFDEQFYL 754
Query: 490 GSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLV 547
+ S + H+ G EGR+P + Y+ + D+ A +
Sbjct: 755 EQNPKVAEAVASGLFSSGYEHFTKVGQFEGRSPSTLVNEVSYLRDNPDVAVAVKA--GVY 812
Query: 548 QAGKDHFSNFGYEEGR 563
Q+G +HF FG E R
Sbjct: 813 QSGIEHFVLFGQRENR 828
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 13/202 (6%)
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
G D + + + F Y+A + + A A+ + G +H
Sbjct: 591 TTAADPGFDFASGYG--FLNADRAMAMLALFDESFYLAQYPQVAAAVAN--KTFRNGFEH 646
Query: 470 FSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNP-DAFK 525
F+ FG EG + FD+ LYL D+ + + H+I G +GR+P + +
Sbjct: 647 FALFGQYEGLNPSAKFDNQLYLALNPDVAEQVSNGVFRSGFDHFIKRGEFQGRDPRNLYN 706
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVF 583
Y+ + + ++ +G +HF FG EGR S F+ YL +
Sbjct: 707 ESYYLEQNSGVATFLSEKKFR--SGYEHFILFGQFEGRKGSPFFDEQFYLEQNPKVAEAV 764
Query: 584 GSD-RSAAAQHYITHGMKEGRA 604
S S+ +H+ G EGR+
Sbjct: 765 ASGLFSSGYEHFTKVGQFEGRS 786
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 59/182 (32%), Gaps = 9/182 (4%)
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS-DRGAAARH 509
D AD G F N FD YL Y + + H
Sbjct: 588 DPGTTAADPGFDFASG-YGFLNADRAMAMLALFDESFYLAQYPQVAAAVANKTFRNGFEH 646
Query: 510 YITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-- 566
+ G EG NP A F Y+A + D+ ++ + ++G DHF G +GR
Sbjct: 647 FALFGQYEGLNPSAKFDNQLYLALNPDVAEQVSN--GVFRSGFDHFIKRGEFQGRDPRNL 704
Query: 567 FNPDLYLTSYDDLWNVFGSD-RSAAAQHYITHGMKEGRALGI-SGMQFKSVMNLSEKSRD 624
+N YL + + +H+I G EGR QF N
Sbjct: 705 YNESYYLEQNSGVATFLSEKKFRSGYEHFILFGQFEGRKGSPFFDEQFYLEQNPKVAEAV 764
Query: 625 KA 626
+
Sbjct: 765 AS 766
>gi|4104348|gb|AAD02003.1| S-layer-RTX protein [Campylobacter rectus]
Length = 1238
Score = 101 bits (251), Expect = 5e-19, Method: Composition-based stats.
Identities = 46/328 (14%), Positives = 91/328 (27%), Gaps = 16/328 (4%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
++ + + D G TI ++ EI G +G
Sbjct: 789 YGGTGNDRIHGGAQNDIIYGDEGDDEIYGDDGDDTINGNDGDDEIDGGQGDDIIHGNDGD 848
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ G + + + ++ G + + G+
Sbjct: 849 DTIRGGAGNDRIEGGQGDDRLIGDEGNDHIEGGDGNDLLYGDNGDDTI------NGGTGN 902
Query: 204 NNIYKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGY 256
+ IY + + IY G+D + D + G N I + G
Sbjct: 903 DQIYGGEGDDKIYGGQGNDKIYGLEGNDTIYGGEGDDEIAGANGNDIIKGDGGNDILQGN 962
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N I +++ G GND + G NN + + G+D G G D +
Sbjct: 963 DGNDKIYGGEGDDTIYGGEGNDTIDGEFGNNTIYGNEGDDTIYGGEGNDKIY--GGQGND 1020
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVI 375
KIY ++ + + + D + + D + + +
Sbjct: 1021 KIYGYKGNNTIMGESGKDSIYGGDGDDTIYGNDGNDIIFGNDGNDTIYGNEDNDLVFGGA 1080
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYL 403
G D + K + G D +
Sbjct: 1081 GNDTIDGGKGNDAIYGNNGNDKIYGELN 1108
Score = 84.1 bits (206), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/313 (14%), Positives = 88/313 (28%), Gaps = 16/313 (5%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
T+ I G + TI+ + + G+ G+D + GN N+V + + G D G +G D
Sbjct: 736 ATDGPDCIQGTQDADTISGKGGNDIIYGNGGDDTIYGNGGNDVLYGNEGADKIYGGTGND 795
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + IY E +Y + + D + + I+
Sbjct: 796 RI--HGGAQNDIIYGDEGDDEIYGDDGDDT--------INGNDGDDEIDGGQGDDIIHGN 845
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ + G D E + EG D Y D + + +
Sbjct: 846 DGDDTIRGGAGNDRIEGGQGDDRLIGDEGNDHIEGGDGNDLLYGDNGDDTINGGTGNDQI 905
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
Y G + + + ++ + D G D G + +
Sbjct: 906 YGGEGDDKIYGGQGNDKIYGLEGNDTIYGGEGDDEIAGANGNDIIKGDGGNDILQGNDGN 965
Query: 486 YLYLGSYDDLRNVFG------SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
G D G Y G + + ++ +
Sbjct: 966 DKIYGGEGDDTIYGGEGNDTIDGEFGNNTIYGNEGDDTIYGGEGNDKIYGGQGNDKIYGY 1025
Query: 540 FADAPDLVQAGKD 552
+ + ++GKD
Sbjct: 1026 KGNNTIMGESGKD 1038
Score = 70.6 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 46/257 (17%), Positives = 72/257 (28%), Gaps = 15/257 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + D G TI EI A G
Sbjct: 888 YGDNGDDTINGGTGNDQIYGGEGDDKIYGGQGNDKIYGLEGNDTIYGGEGDDEIAGANGN 947
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM------VSDI 188
G + G D + + Y + +D FG +
Sbjct: 948 DIIKGDGGNDILQGNDGNDKIYGGEGDDTIYGGEGNDTIDGEFGNNTIYGNEGDDTIYGG 1007
Query: 189 VAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
KIYG + IY +IY GDD + G N I
Sbjct: 1008 EGNDKIYGGQGN---DKIYGYKGNNTIMGESGKDSIYGGDGDDTI----YGNDGNDIIFG 1060
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ +I G E N + +++ G GND + GN+ N+ + + + DG G D+
Sbjct: 1061 NDGNDTIYGNEDNDLVFGGAGNDTIDGGKGNDAIYGNNGNDKIYGELNDTLLDGGEGYDS 1120
Query: 307 FFYYAPSYLYKIYRFEN 323
++ I N
Sbjct: 1121 LYFNEDIDFDAIRDTLN 1137
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 53/158 (33%), Gaps = 13/158 (8%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + + +++ G+D ++ G N I + I G E N TI
Sbjct: 299 DGLGGDDEIYGGKGNDSLFGGAGND----SIYGNEDNDIIHGDDGNDIIDGGEGNDTIYG 354
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ +++ G GND + G + ++ + G D G G DT + ++ +
Sbjct: 355 DSGDDTIRGGIGNDGIYGGAGDDTLYGGDGKDKISGGDGDDTLY--GDDGNDQMNGGDGK 412
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
VY + E + D I +
Sbjct: 413 DKVYGGKG-------NDEIFTYMDDEIVDGGEGTDKLF 443
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 44/150 (29%), Gaps = 3/150 (2%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + I + + GND V G ++ + GND G +G D+ +
Sbjct: 273 GTDGTDHIRGTDKKDFIDAKGGNDFVDGLGGDDEIYGGKGNDSLFGGAGNDSIY--GNED 330
Query: 315 LYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
I+ + I+ + + S + +R L + +
Sbjct: 331 NDIIHGDDGNDIIDGGEGNDTIYGDSGDDTIRGGIGNDGIYGGAGDDTLYGGDGKDKISG 390
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
G D + +G+D +
Sbjct: 391 GDGDDTLYGDDGNDQMNGGDGKDKVYGGKG 420
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 45/163 (27%), Gaps = 10/163 (6%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG+ G D + G + GND DG G D + ++ +Y
Sbjct: 271 IVGTDGTDHIRGTDKKDFIDAKGGNDFVDGLGGDDEIY--GGKGNDSLFGGAGNDSIYGN 328
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
++ + D + + + + + IG D
Sbjct: 329 EDND--------IIHGDDGNDIIDGGEGNDTIYGDSGDDTIRGGIGNDGIYGGAGDDTLY 380
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+G+D Y D N + + Y G E
Sbjct: 381 GGDGKDKISGGDGDDTLYGDDGNDQMNGGDGKDKVYGGKGNDE 423
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 82/277 (29%), Gaps = 13/277 (4%)
Query: 204 NNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ IY + + IY GDD L GG + ++ G + N
Sbjct: 350 DTIYGDSGDDTIRGGIGNDGIYGGAGDDTL----YGGDGKDKISGGDGDDTLYGDDGNDQ 405
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + V G GND + + + G D +S D + + +
Sbjct: 406 MNGGDGKDKVYGGKGNDEIFTYMDDEIVDGGEGTDKLFITSKDDKLKLDFDTLRDGLDKR 465
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI----QVIGQ 377
N+ + + + F VE Q + +V + + L + +D I +
Sbjct: 466 INSFELLHLGDDGKFFNKAVEITNLTPQDVLAVTDDENTKLLIMSDEKDSIRLKNFTVSS 525
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D + K + + G + + ++ + + T G E R
Sbjct: 526 DTTKLRKGYTRYEGKVGEKTI---KVDVKDDSNVMGKVINGGNTSDSLRGTKGDDEIRGG 582
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
+ + D + + KD + G
Sbjct: 583 NGNDTVSGGVGGADSLYGDGGDDRIEGDLKDIILDGG 619
Score = 40.5 bits (93), Expect = 0.85, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 33/159 (20%), Gaps = 3/159 (1%)
Query: 331 NEHKQDFLSDVERLRFAD---QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D + ++ F D + + + L G D +
Sbjct: 273 GTDGTDHIRGTDKKDFIDAKGGNDFVDGLGGDDEIYGGKGNDSLFGGAGNDSIYGNEDND 332
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
+G DI Y D + Y G D +
Sbjct: 333 IIHGDDGNDIIDGGEGNDTIYGDSGDDTIRGGIGNDGIYGGAGDDTLYGGDGKDKISGGD 392
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ L + GKD + F D
Sbjct: 393 GDDTLYGDDGNDQMNGGDGKDKVYGGKGNDEIFTYMDDE 431
>gi|304394379|ref|ZP_07376302.1| rhizobiocin RzcA [Ahrensia sp. R2A130]
gi|303293819|gb|EFL88196.1| rhizobiocin RzcA [Ahrensia sp. R2A130]
Length = 7333
Score = 101 bits (250), Expect = 6e-19, Method: Composition-based stats.
Identities = 75/497 (15%), Positives = 135/497 (27%), Gaps = 37/497 (7%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
LTF S+ + G + + + G +
Sbjct: 4564 AGLTFVGVDSVSNGTYEIVAFGDETFIIVRAEPGFSGDITVRYLIEDETGLQDLGFATGY 4623
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+ L L+ GS D + ++ D++ S
Sbjct: 4624 AATTYDLTLV--GSDVTDLIEGTSDAETITGLAGDDLLVALGGNDTIDGGSGNDTIRAGD 4681
Query: 186 SDIVAVQKIYGAPKGSLGN---NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
D V + GA G+ + + + +++ GG
Sbjct: 4682 GDDVIIGGD-GADTIDGGDGYDTVDFADSNTGVNADLESRIGRGGH----AQGDVYTNVE 4736
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
L T+ ++GG + + + +++ G SGND + G ++V G DV G
Sbjct: 4737 ALLGTQYADTLGGSTGDERLVGNDGDDTLDGRSGNDDLSGGKGDDVLTGGDGADVIAGGD 4796
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT Y + + ++ D L+ +E L + D +IL
Sbjct: 4797 GNDTASYELSAEAVSVSLQNGTAA---GSDAHGDTLTSIENLTGSAFNDDLQGGDGTNIL 4853
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L + G D+ + G DI Y D
Sbjct: 4854 IGGRGDDVLRGMAGDDLLIGGRGADTLSGGAGIDI--------ADYTLSAEGVTVDMADG 4905
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
A + + H D++ L + +
Sbjct: 4906 AAGGGDATGDTFDGIEVIQGSY----HNDILRGDGTDNMLRGGLGEDVLDG------RGG 4955
Query: 483 FDSYLYLGS----YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
FD+ Y S DL G+ AA I+ G + D AL + +
Sbjct: 4956 FDTADYSRSETPVTLDLGTGVGTAGEAAGDTLISIEKVTGSSYD--DALSGSTAADTFDG 5013
Query: 539 AFADAPDLVQAGKDHFS 555
+ +AG D +
Sbjct: 5014 GMGNDTMSGKAGSDTYV 5030
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/321 (12%), Positives = 80/321 (24%), Gaps = 58/321 (18%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ G D + G + ++ G+D+ G G DT+ + +I + A
Sbjct: 3273 ATQGADTITGTAGDDEISGDGGSDLLFGGEGNDTYVWSRGDGHDEISDIGGVDRLRLAGV 3332
Query: 333 HKQDFL--------------------------------SDVERLRFADQCIDSVNVK--- 357
+ D + +E + D I +
Sbjct: 3333 TEGDLFFEQASRGLIVTIAATSAGSDGGTVILLGDPLGTAIESIELEDGTIIDSDAISAR 3392
Query: 358 --------QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ A+ + L +G D + + G S +
Sbjct: 3393 LIAQQASVFDDRITGFATGDTLAGGLGDDTLLGGDGADTYTYARGDSSDIISDVSTDGAV 3452
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
D + G D + + G +GR+ L + + D D +V +
Sbjct: 3453 DTLKLVGID---PSDVSLRIGFDDGRSTGGGADL-----NVIIAPTITDGIDGGRVTVRN 3504
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
+ G + D + G + G + L
Sbjct: 3505 SLDSDDTRGIEAIVFDDGTVWQRSDFATLIGRNIGTGNDDLLI-------GTTGDDDLTG 3557
Query: 530 IASHEDLINAFADAPDLVQAG 550
+ ++ L+ D G
Sbjct: 3558 LGGNDSLLGGEGDDTYFYSRG 3578
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 51/164 (31%), Gaps = 4/164 (2%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + + G D L GG + + G N +
Sbjct: 7157 YDDVEIGGNGSDVFFGGRGADYL----SGGAGADVLFGGRGADVLNGGSGNDLLFGGRGG 7212
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G G D++ G + +G DV G G+DTF + S IY F+
Sbjct: 7213 DTINGDEGRDIIFGGRGRDTITGGAGADVLFGGRGVDTFVFGEGSGRDTIYDFKTTRSTN 7272
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ + Q + + +L ++L
Sbjct: 7273 SSLIAGDQIAISIDGIDSFAQLLSYGSQSGGGVLFDFGGGDELF 7316
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/245 (18%), Positives = 79/245 (32%), Gaps = 12/245 (4%)
Query: 83 SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
+ G + D + G G ++ + G+ G
Sbjct: 4817 GTAAGSDAHGDTLTSIENLTGSAFNDDLQGGDGTNILIGGRGDDVLR---GMAGDDLLIG 4873
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
G + D ++ + + D A+ G AT D + V +
Sbjct: 4874 GRGADTLSGGAGIDIADYTLSAEGVTVDMADGAAGGGDATGDTFDGIEVIQGSYHNDILR 4933
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G+ + + + GG D D + +DL T + G + I
Sbjct: 4934 GDGT---DNMLRGGLGEDVLDGRGGFDTADYS-RSETPVTLDLGTG-VGTAGEAAGDTLI 4988
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ IE V GSS +D + G++A + F GND G +G DT+ + S +
Sbjct: 4989 S----IEKVTGSSYDDALSGSTAADTFDGGMGNDTMSGKAGSDTYVFGTESGTDLVIENG 5044
Query: 323 NAIIV 327
+A V
Sbjct: 5045 DAADV 5049
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 71/212 (33%), Gaps = 32/212 (15%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY-------------- 319
+ G+D+V G+ + SG+D G +G DT+ + +
Sbjct: 2628 TDGSDLVFGSVGADTLEGGSGDDDIRGGAGDDTYIFRRGDGRDVLTDDRREEVGGTDRLE 2687
Query: 320 ---------------RFENAIIVYDANEHKQDFLSD-VERLRFADQC-IDSVNVKQRSIL 362
I++ + + L +E + F D ++ ++
Sbjct: 2688 IRGYLAEEMQVSRVGGSNEEIVLTFDGTNDEIVLRGRIETVAFGDGTEFAIDDLISTAVG 2747
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDLRNVFGSDRGA 421
+ TA +L +G DVFE + +G DI F D R+ D+
Sbjct: 2748 QGTAYANELTGTLGNDVFEGGRGDDVLRGLDGSDIYIFRRGDGADIITDPRSATNGDKIV 2807
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
A H+++ G A L + + + +I
Sbjct: 2808 LADHFVSELKVRGVEGSANDLLMLLGNGDQII 2839
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 50/178 (28%), Gaps = 44/178 (24%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ G+D + G +++V GND +G G DT+ + S IY +
Sbjct: 1980 TDGDDSIYGFRSDDVIEGGLGNDTLEGHGGNDTYLFSRGSGHDTIYEDTYDKGPLSTEKA 2039
Query: 334 KQDFLS-------------------------------------------DVERLRFADQC 350
+D L VER F+D
Sbjct: 2040 GEDTLVFDGISASDVDFTRTDLDLIITVRDTGESITIRDQYVRAEQQTHAVERFEFSDAT 2099
Query: 351 IDSVNVKQRSI-LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ N I L TA+ E + +V + +G DI Y
Sbjct: 2100 LLFSNFNPEDIDLVGTAADETITGSNFSEVLDGRAGNDTLIGRDGGDIYRFDVGYGED 2157
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 50/177 (28%), Gaps = 45/177 (25%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T+I +G+ +D++IG + ++ GND G G DT+FY L I
Sbjct: 3530 FATLIGRNIGTGNDDLLIGTTGDDDLTGLGGNDSLLGGEGDDTYFYSRGDGLDSIEDASG 3589
Query: 324 AIIVYDANEHKQDFLS---------------------------------DVERLRFADQC 350
+ + + L+ +E++ +D
Sbjct: 3590 STDRLEIAGYALSELTFASRGLEGSELIIRLAQFDDEITIIGGLSNGANRIEQIVLSDSG 3649
Query: 351 ------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ + + + L +G DV + + G
Sbjct: 3650 ETLSLNDIRAIMLAQSASDSNDTILGSTGDDVLRGGVGDDVLQGNDGTDTYIYRAGD 3706
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 31/226 (13%), Positives = 58/226 (25%), Gaps = 59/226 (26%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G T V+E+ G+D + G +NV +GND G G DT+ +
Sbjct: 1819 FIFGDGTSLEFTEIADRVLENART-DGDDAIYGMVNDNVLDGGAGNDYLTGFFGSDTYVF 1877
Query: 310 YAPSYLYKIYRFE-------------------NAIIVYDANEHKQDFLS----------- 339
I + + + + + D L+
Sbjct: 1878 ERGYGHDVIEDNDTASKLFGNTPDTLEFRGGIDWTDLEFSRDGDTDTLTITIVGTEDAVT 1937
Query: 340 ---------------DVERLRFADQC-----------IDSVNVKQRSILEYTASYEDLIQ 373
+E + F + ID+ + S + +
Sbjct: 1938 LVDFLLNFEFIGFVNVIETITFDNDVEWSYLDLLQKFIDAERTDGDDSIYGFRSDDVIEG 1997
Query: 374 VIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+G D E F G D ++ G + +
Sbjct: 1998 GLGNDTLEGHGGNDTYLFSRGSGHDTIYEDTYDKGPLSTEKAGEDT 2043
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 52/200 (26%), Gaps = 36/200 (18%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG + + G + I L + G I G++ + + G
Sbjct: 2702 GGSNEEIVLTFDGTNDEIVLRGRIETVAFGDGTEFAIDDLISTAVGQGTAYANELTGTLG 2761
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLY---------------------------KI 318
N+VF G+DV G G D + + +
Sbjct: 2762 NDVFEGGRGDDVLRGLDGSDIYIFRRGDGADIITDPRSATNGDKIVLADHFVSELKVRGV 2821
Query: 319 YRFENAIIVYDANEHKQDFLSD-------VERLRFADQCIDSVNVKQR--SILEYTASYE 369
N +++ N + ++ ++R F + + + +
Sbjct: 2822 EGSANDLLMLLGNGDQIILVNGLNRFSRSIDRFEFNGGTVWTHAQIIDLYDRTNAASDAD 2881
Query: 370 DLIQVIGQDVFESMKHFYEF 389
+ G DV F
Sbjct: 2882 IITGTSGDDVLTGTNGNDVF 2901
Score = 42.5 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 36/256 (14%), Positives = 74/256 (28%), Gaps = 47/256 (18%)
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
T ++DI A+ A + + + + + G D G
Sbjct: 3651 TLSLNDIRAIMLAQSASDSNDTILGSTGDDVLRGGVGDDVLQGNDGTDTYIYRAGDGDDR 3710
Query: 242 YIDLNTESWS--------------------SIGGYEKNMTIAQHT-----VIESVVGSSG 276
ID+ S G ++ I +IE +
Sbjct: 3711 IIDIAPNRSSLHSSLIELPDHNVDDIAYVTRGGPDSDDLVIMFGGERDRLIIERALTPRA 3770
Query: 277 NDVVIG---------------------NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N+ I S ++ + +G+D F ++G DT + L
Sbjct: 3771 NEDTITFADGTVWTADDMRAATMATSSTSGDDKIYGFAGDDTFLSTTGDDTMWGRDGDDL 3830
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQV 374
Y+ R +YD E + ++ +D + +++ A+ D + V
Sbjct: 3831 YQFARGSGQDTIYDTVEAGGSDRVEFLDFVSSEVSVDRLYQGSDALVFTFATSPRDSLTV 3890
Query: 375 IGQDVFESMKHFYEFG 390
G + ++ + G
Sbjct: 3891 FGGLLGAVAEYTFTDG 3906
Score = 41.3 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 29/205 (14%), Positives = 47/205 (22%), Gaps = 34/205 (16%)
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + D L +E D + + + L G
Sbjct: 7128 FEGVDAFTYTVSDGTTEVDGLVQIEVDNPYD--DVEIGGNGSDVFFGGRGADYLSGGAGA 7185
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
DV + G D+ F D EGR+
Sbjct: 7186 DVLFGGRGADVLNGGSGNDLLFGGRGGDTINGD----------------------EGRD- 7222
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ + D I A A L FG GR +D + L
Sbjct: 7223 -----IIFGGRGRDTITGGAGADVLFGGRGVDTFVFGEGSGRDTIYDFKTTRSTNSSLIA 7277
Query: 498 ----VFGSDRGAAARHYITHGVKEG 518
D + +++G + G
Sbjct: 7278 GDQIAISIDGIDSFAQLLSYGSQSG 7302
Score = 40.9 bits (94), Expect = 0.69, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 39/121 (32%), Gaps = 3/121 (2%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYI--DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
I +DLL G I L + + ++ + ++G +
Sbjct: 2322 ILRRNDNDLLIDIGNGTDVLTIVDGLGATTVEHFEFADGSVLTLDQIRDDLLIGDETSQR 2381
Query: 280 VIGNSA-NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
++G ++ +G+D +G G DT+ + I + +D +
Sbjct: 2382 IVGFDGRDDRIEGGAGSDSLEGGLGDDTYTFGFGQGNAVIRETGGIDRIEFGTGVTRDQI 2441
Query: 339 S 339
S
Sbjct: 2442 S 2442
Score = 39.4 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 2/94 (2%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D +G+ + +V F GND G +G D + + + N + E D
Sbjct: 1686 DDAYVGSGSGDVLFGGKGNDALTGGAGGDYYIFTRGDGQDVVNDRGNF--SFGPVEAGID 1743
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
F+ V + +D + ++
Sbjct: 1744 FIQFVGDISSSDLKLVRDGASDDLLITLLDKDGV 1777
Score = 38.6 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 66/204 (32%), Gaps = 17/204 (8%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--ENAIIV 327
+VG++ ++ + G++ + V +GND G G D + + I +
Sbjct: 2111 DLVGTAADETITGSNFSEVLDGRAGNDTLIGRDGGDIYRFDVGYGEDLIIDVQERSGWED 2170
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI--GQDVFESMKH 385
+ D + ++F D+ + +T S +DL+ + D+
Sbjct: 2171 RRGTDVPTD-----DVVQFGDEITR-------DNVVFTRSGDDLVITVEQRTDILRIRNQ 2218
Query: 386 F-YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
F E E + D +L ++L + +RG + + L
Sbjct: 2219 FADEINGIERFEFVGDGFLDRRDIEELLQIEAGNRGDNIITGLENQPNSFDGGQGDDLLI 2278
Query: 445 YIASHEDLINAFADAPDLVQVGKD 468
+ + D ++ D
Sbjct: 2279 GGLAADTYAFGIGSDFDTIEERAD 2302
Score = 37.8 bits (86), Expect = 6.4, Method: Composition-based stats.
Identities = 40/327 (12%), Positives = 77/327 (23%), Gaps = 48/327 (14%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSS--GLDT-----------FFYYAPSYLYK 317
V G+ G D+ +S + F G+D + G D + + S
Sbjct: 1556 VAGTDGTDLFHISSGDQTFTGGLGSDTYVVGQDFGRDIIRDLDQGSFDDLRFSSLSADDV 1615
Query: 318 IYRFENAIIVYDANEHKQDFL--------------------SDVERLRFADQCI------ 351
+ ++ E ++ + V + FAD I
Sbjct: 1616 TSLRDGEDMIITVTETGEEIRLIDQFLGELNEYYSSGEQAETGVNVIVFADGEIWDRFEM 1675
Query: 352 ---DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ + S + L G D + + G D G++
Sbjct: 1676 AIQVADPRDTDDAYVGSGSGDVLFGGKGNDALTGGAGGDYYIFTRGD--GQDVVNDRGNF 1733
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
G D + +K R+ + L + D V
Sbjct: 1734 SFGPVEAGIDFIQFVGDISSSDLKLVRDGASDDLLITL---LDKDGVETSDTIKVVGQLG 1790
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
+ Y+ R +FG ++ R A+
Sbjct: 1791 GIELNLQAWEQVSPGLGVTYVSPALIERFIFGDGTSLEFTEIADRVLENARTDGD-DAIY 1849
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFS 555
+ + L + G D +
Sbjct: 1850 GMVNDNVLDGGAGNDYLTGFFGSDTYV 1876
>gi|307315782|ref|ZP_07595297.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
gi|306898574|gb|EFN29246.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
Length = 534
Score = 100 bits (249), Expect = 7e-19, Method: Composition-based stats.
Identities = 63/400 (15%), Positives = 108/400 (27%), Gaps = 18/400 (4%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----FYYA 311
TI + + G GND++ GN ++ G+D +DG +G DT Y A
Sbjct: 123 MSGGDTINGSAGDDDISGRGGNDILNGNDGDDTITGGEGDDTYDGGAGFDTLSFQDAYNA 182
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
P+ I V D + + E+ V I + +
Sbjct: 183 PTAFRGINLNAATGTVIDQFGFSE-TFQNFEQYGGTQFADAMVGSSADDIFMGLGGRDTI 241
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSY---LYLGSYDDLRNVFGSDRGAAARHYIT 428
G D + + G S+G + + GS D L ++ +
Sbjct: 242 NGGAGVDTVRYDRDVAQ-GASKGVSVNLTTGVAIDSFGSQDTLSSIENVRATNFKDTIVG 300
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+ A + D + A + + G +
Sbjct: 301 NSDSNFLRAFAGADTLDGKAGADRMRGGAGDDTYYVDNAGDIVDESLDNGAGIDMVRSSV 360
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
+ V GS A + G G L + L A +
Sbjct: 361 SFDLANSTAVKGSVERLALQ---GSGAINGSGNALSNGLTGNGAANTLNGAAGNDFINGG 417
Query: 549 AGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
G D + G + F+ L S D + F G ++
Sbjct: 418 LGND--TLIGSTGLDTFIFSSALNAASNVDTISDFVVADDVMWIDNAVFAGVVG-TGALT 474
Query: 609 GMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
QF S + D + ++ L+ D G+G
Sbjct: 475 AAQFASN---TTGLAADTDDRIIYESDTGKLFYDSDGNGA 511
Score = 42.1 bits (97), Expect = 0.33, Method: Composition-based stats.
Identities = 42/323 (13%), Positives = 97/323 (30%), Gaps = 17/323 (5%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ S + + D G G T+ + + G + G+ +
Sbjct: 215 GGTQFADAMVGSSADDIFMGLGGRDTINGGAGVDTVRYDRDVAQ-GASKGVSVNLTTGVA 273
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+G + S + +V + + ++ + +D + GA + G
Sbjct: 274 IDSFGSQDTL---SSIENVRATNFKDTIVGNSDSNFLRAFAGADT--LDGKAGADRMRGG 328
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
V +++ + G D++ ++ + N + + +
Sbjct: 329 AGDDTYYVDNAGDIVDESLDNGAGIDMVRSSVSFDLANSTAVKGSVERLALQGSGAINGS 388
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + + G+ + + G + N+ GND GS+GLDTF + + +
Sbjct: 389 GNALSNGLTGNGAANTLNGAAGNDFINGGLGNDTLIGSTGLDTFIFSSALNAASNVDTIS 448
Query: 324 AIIVYDANEHKQDFLSDVERLRFAD--QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+V D + ++ FA + S A+ D + D
Sbjct: 449 DFVV-------ADDVMWIDNAVFAGVVGTGALTAAQFASNTTGLAADTDDRIIYESDT-- 499
Query: 382 SMKHFYEFGLSEGRDITFDSYLY 404
+ G G + F +
Sbjct: 500 GKLFYDSDGNGAGGSVHFATVSI 522
>gi|119484508|ref|ZP_01619125.1| hypothetical protein L8106_02282 [Lyngbya sp. PCC 8106]
gi|119457982|gb|EAW39105.1| hypothetical protein L8106_02282 [Lyngbya sp. PCC 8106]
Length = 1880
Score = 100 bits (249), Expect = 7e-19, Method: Composition-based stats.
Identities = 49/290 (16%), Positives = 83/290 (28%), Gaps = 15/290 (5%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ NI + + +P + D D + + I + + SI G
Sbjct: 1550 VTPSNTAANISSEDSSSQPTPNADILVG----DATDNIISALAGDDIVNSGDGNDSINGN 1605
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N T+ + ++G NDV+ G++ N+ + G+DV DG G DT F
Sbjct: 1606 QDNDTVDGGNGNDVILGGKNNDVIFGSAGNDELNGNLGDDVVDGGEGADTVF----GGQN 1661
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ DF+ E + L + + L IG
Sbjct: 1662 NDTLTGGDGDDWLNGNLGTDFVDGGE------GEDLVYGGQDGDTLMGGSGNDTLFGNIG 1715
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + D + Y DL N + G
Sbjct: 1716 SDFIAGNDGNDLIYGGKDNDTLSGNQGNDTLYGDLGNDVVVGGEGTDFVFGGEGNDTLDG 1775
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN-FGCEEGRFVTFDS 485
+ L ++ L+ A + + G D F G E F
Sbjct: 1776 GEGNDELTGGNGNDLLLGAEGNDTLTGEAGSDRFVLVSGMGEDLITDFTD 1825
Score = 95.6 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 82/302 (27%), Gaps = 14/302 (4%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
P + V D + + + + + +DI+
Sbjct: 1523 PVETSTSPVTEAVFYDPTSSISGVTQPVTPSNTAANISSEDSSSQPTPNADILVGDATDN 1582
Query: 197 APKGSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G++I + T+ G+D++ +GG N + + +
Sbjct: 1583 IISALAGDDIVNSGDGNDSINGNQDNDTVDGGNGNDVI----LGGKNNDVIFGSAGNDEL 1638
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + + ++V G ND + G ++ + G D DG G D +
Sbjct: 1639 NGNLGDDVVDGGEGADTVFGGQNNDTLTGGDGDDWLNGNLGTDFVDGGEGEDLVY--GGQ 1696
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLI 372
+ ++ +D L + + D+++ L + ++
Sbjct: 1697 DGDTLMGGSGNDTLFGNIGSDFIAGNDGNDLIYGGKDNDTLSGNQGNDTLYGDLGNDVVV 1756
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D + EG D D L G+D +
Sbjct: 1757 GGEGTDFVFGGEGNDTLDGGEGN----DELTGGNGNDLLLGAEGNDTLTGEAGSDRFVLV 1812
Query: 433 EG 434
G
Sbjct: 1813 SG 1814
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 78/266 (29%), Gaps = 15/266 (5%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
I ++ + + + DV G I E+ LG
Sbjct: 1592 IVNSGDGNDSINGNQDNDTVDGGNGNDVILGGKNNDVIFGSAGNDELNGNLGDDVVDGGE 1651
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G V+G N ND+ ++ + D G +V + G
Sbjct: 1652 GADTVFGGQN---NDTLTGGDGDDWLNGNLGTDFVDGGEGEDLVYGGQDGDTLMGG---- 1704
Query: 202 LGNNIYKIE---VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GN+ + IY +D L G N + G E
Sbjct: 1705 SGNDTLFGNIGSDFIAGNDGNDLIYGGKDNDTL----SGNQGNDTLYGDLGNDVVVGGEG 1760
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ +++ G GND + G + N++ + GND G +G D F + I
Sbjct: 1761 TDFVFGGEGNDTLDGGEGNDELTGGNGNDLLLGAEGNDTLTGEAGSDRFVLVSGMGEDLI 1820
Query: 319 YRF-ENAIIVYDANEHKQDFLSDVER 343
F + IV D L+ E
Sbjct: 1821 TDFTDGEDIVVLDGGLTFDQLTLTED 1846
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 34/279 (12%), Positives = 66/279 (23%), Gaps = 33/279 (11%)
Query: 307 FFYYAPSYLYKIYR--FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILE 363
FY S + + + + ++E + + D + ++ I+
Sbjct: 1535 VFYDPTSSISGVTQPVTPSNTAANISSEDSSSQPTPNADILVGDATDNIISALAGDDIVN 1594
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----------------------D 400
+ + D + + D+ F D
Sbjct: 1595 SGDGNDSINGNQDNDTVDGGNGNDVILGGKNNDVIFGSAGNDELNGNLGDDVVDGGEGAD 1654
Query: 401 SYLYLGSYDDLRNVFGSDRGAAA--RHYITHGVKEG--RNPDAFKALEYIASHEDLINAF 456
+ + D L G D ++ G E L + ++ L
Sbjct: 1655 TVFGGQNNDTLTGGDGDDWLNGNLGTDFVDGGEGEDLVYGGQDGDTLMGGSGNDTLFGNI 1714
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
G D G + L Y DL N + G
Sbjct: 1715 GSDFIAGNDGND-LIYGGKDNDTLSGNQGNDTL--YGDLGNDVVVGGEGTDFVFGGEGND 1771
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ L ++ L+ A + +AG D F
Sbjct: 1772 TLDGGEGNDELTGGNGNDLLLGAEGNDTLTGEAGSDRFV 1810
>gi|163851992|ref|YP_001640035.1| hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
gi|240139119|ref|YP_002963594.1| hypothetical protein MexAM1_META1p2539 [Methylobacterium extorquens
AM1]
gi|163663597|gb|ABY30964.1| Hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
gi|240009091|gb|ACS40317.1| hypothetical protein MexAM1_META1p2539 [Methylobacterium extorquens
AM1]
Length = 361
Score = 100 bits (249), Expect = 8e-19, Method: Composition-based stats.
Identities = 73/363 (20%), Positives = 130/363 (35%), Gaps = 32/363 (8%)
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
LGL+ +D ND+ ++ D +G + + +
Sbjct: 23 LGLLGNDVITDPGGFNRIDGQDGNDTITGGNNVDYIAGGPGNDTIYGGNGSDQLIGEIGN 82
Query: 192 QKIYG--APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
IYG + GN + G DL+ G N E
Sbjct: 83 DTIYGQDGDDYAAGN---PGDDVLYGGRGNDFFVGEQGADLV----FGEEGNDFVAGGED 135
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G + N + + + G +GNDV+ G+ N+ +G + DG+ G+DT +
Sbjct: 136 DDTVYGGDGNDLVDGDLGNDVLFGDAGNDVLFGDYGNDRMSGGTGTNTLDGALGIDTAVF 195
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI--DSVNVKQRSILEYTAS 367
+ + A ++ D + + E FAD+ I N + +
Sbjct: 196 NFNFAQAGVTSA--GTLSSIAGQNSLDTVKNTEVFAFADRSILQGDGNQAVDDLFYLSRY 253
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ ++ +HF ++G EGR+ FD+ YL +Y + H
Sbjct: 254 GDVYRNG-----NDAEQHFSDYGWKEGRNPNAFFDTKGYLAAYA----DVAAAGINPLEH 304
Query: 426 YITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
Y+T+G KEGR+P F +Y+A++ D+ A + H+ +G EGR D
Sbjct: 305 YLTYGWKEGRDPSAQFDTKQYLAANGDVAAAGLNPLL-------HYLEYGAVEGRATFND 357
Query: 485 SYL 487
Sbjct: 358 GTF 360
Score = 99.9 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 67/375 (17%), Positives = 109/375 (29%), Gaps = 26/375 (6%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
T+ G + + T I G N I + G GND + G + +
Sbjct: 2 ATISGTNGDNVLNGTLQDDVILGLLGNDVITDPGGFNRIDGQDGNDTITGGNNVDYIAGG 61
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCI 351
GND G +G D IY + + +
Sbjct: 62 PGNDTIYGGNGSDQLI--GEIGNDTIYGQDGDDYAAGNPGDDVLYGGRGNDFFVGEQGAD 119
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ + + + G D+ + G D+ F G Y +
Sbjct: 120 LVFGEEGNDFVAGGEDDDTVYGGDGNDLVDGDLGNDVLFGDAGNDVLF------GDYGND 173
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
R G+ N D +V
Sbjct: 174 RMSGGTGTNTLDGALGIDTAVFNFNFAQAGVTSAGTLSSIAGQNSLDTVKNTEVFAFADR 233
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
+ +G D YL Y D+ A +H+ +G KEGRNP+AF +
Sbjct: 234 SILQGDGNQA-VDDLFYLSRYGDVYRNG----NDAEQHFSDYGWKEGRNPNAFFDTKGYL 288
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSA 589
+ + A P +H+ +G++EGR + F+ YL + D+
Sbjct: 289 AAYADVAAAGINPL------EHYLTYGWKEGRDPSAQFDTKQYLAANGDVAAA----GLN 338
Query: 590 AAQHYITHGMKEGRA 604
HY+ +G EGRA
Sbjct: 339 PLLHYLEYGAVEGRA 353
>gi|218530744|ref|YP_002421560.1| Hemolysin-type calcium-binding region [Methylobacterium
chloromethanicum CM4]
gi|254561713|ref|YP_003068808.1| hypothetical protein METDI3303 [Methylobacterium extorquens DM4]
gi|218523047|gb|ACK83632.1| Hemolysin-type calcium-binding region [Methylobacterium
chloromethanicum CM4]
gi|254268991|emb|CAX24952.1| hypothetical protein METDI3303 [Methylobacterium extorquens DM4]
Length = 361
Score = 100 bits (248), Expect = 9e-19, Method: Composition-based stats.
Identities = 73/363 (20%), Positives = 130/363 (35%), Gaps = 32/363 (8%)
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
LGL+ +D ND+ ++ D +G + + +
Sbjct: 23 LGLLGNDVITDPGGFNRIDGQDGNDTITGGNNVDYIAGGPGNDTIYGGNGSDQLIGEIGN 82
Query: 192 QKIYG--APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
IYG + GN + G DL+ G N E
Sbjct: 83 DTIYGQDGDDYAAGN---PGDDVLYGGRGNDFFVGEQGADLV----FGEEGNDFVAGGED 135
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G + N + + + G +GNDV+ G+ N+ +G + DG+ G+DT +
Sbjct: 136 DDTVYGGDGNDLVDGDLGNDVLFGDAGNDVLFGDYGNDRMSGGTGTNTLDGALGIDTAVF 195
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI--DSVNVKQRSILEYTAS 367
+ + A ++ D + + E FAD+ I N + +
Sbjct: 196 NFNFAQAGVTSA--GTLSSIAGQNSLDTVKNTEVFAFADRSILQGDGNQAVDDLFYLSQY 253
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ ++ +HF ++G EGR+ FD+ YL +Y + H
Sbjct: 254 GDVYRNG-----NDAEQHFSDYGWKEGRNPNAFFDTKGYLAAYA----DVAAAGINPLEH 304
Query: 426 YITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
Y+T+G KEGR+P F +Y+A++ D+ A + H+ +G EGR D
Sbjct: 305 YLTYGWKEGRDPSAQFDTKQYLAANGDVAAAGLNPLL-------HYLEYGAVEGRATFND 357
Query: 485 SYL 487
Sbjct: 358 GTF 360
Score = 99.9 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 67/375 (17%), Positives = 109/375 (29%), Gaps = 26/375 (6%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
T+ G + + T I G N I + G GND + G + +
Sbjct: 2 ATISGTNGDNVLNGTLQDDVILGLLGNDVITDPGGFNRIDGQDGNDTITGGNNVDYIAGG 61
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCI 351
GND G +G D IY + + +
Sbjct: 62 PGNDTIYGGNGSDQLI--GEIGNDTIYGQDGDDYAAGNPGDDVLYGGRGNDFFVGEQGAD 119
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ + + + G D+ + G D+ F G Y +
Sbjct: 120 LVFGEEGNDFVAGGEDDDTVYGGDGNDLVDGDLGNDVLFGDAGNDVLF------GDYGND 173
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
R G+ N D +V
Sbjct: 174 RMSGGTGTNTLDGALGIDTAVFNFNFAQAGVTSAGTLSSIAGQNSLDTVKNTEVFAFADR 233
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
+ +G D YL Y D+ A +H+ +G KEGRNP+AF +
Sbjct: 234 SILQGDGNQA-VDDLFYLSQYGDVYRNG----NDAEQHFSDYGWKEGRNPNAFFDTKGYL 288
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSA 589
+ + A P +H+ +G++EGR + F+ YL + D+
Sbjct: 289 AAYADVAAAGINPL------EHYLTYGWKEGRDPSAQFDTKQYLAANGDVAAA----GLN 338
Query: 590 AAQHYITHGMKEGRA 604
HY+ +G EGRA
Sbjct: 339 PLLHYLEYGAVEGRA 353
>gi|194292185|ref|YP_002008092.1| metalloprotease, hemolysin-type calcium-binding region [Cupriavidus
taiwanensis LMG 19424]
gi|193226089|emb|CAQ72036.1| metalloprotease, Hemolysin-type calcium-binding region [Cupriavidus
taiwanensis LMG 19424]
Length = 1648
Score = 100 bits (248), Expect = 9e-19, Method: Composition-based stats.
Identities = 72/508 (14%), Positives = 136/508 (26%), Gaps = 45/508 (8%)
Query: 7 VYTTERI-ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
YT + AD L Q S+ D + ++ +IT N A ++
Sbjct: 1044 TYTLDNSKADALTAGQKVSDALTVSSADQTASQTITVNITGTNDAVVNTVPAA-QSVNED 1102
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY-GIGKGTILSHNA 124
L F + ++ F + + T G GT+ +
Sbjct: 1103 APLVFSTATGNALGFFDVDGSSHTVTLTASGGTITLNGTAGLQFLAGDGSADGTMTFTGS 1162
Query: 125 LHEIGHAL-GLMHPGSYNGGYPVYGVDNDYENDSFLTS-------------VMSYFMPQD 170
I AL GL G + + + V + +
Sbjct: 1163 DAAIRAALDGLQFAGDKDYAGAASLQMQTSDGATADIDAVAIAIEPVNDAPVAAADVVYV 1222
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN----------------IYKIEVQQK 214
S S + ++++ V + A G G I
Sbjct: 1223 SNNTGSILIPVSALLANDGDVDGLALAITGLSGATGAVSNLKFAPGTNNSYIMFDSDNST 1282
Query: 215 DSPFIQTIYDSGGDDLLDL------TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
F T+ D G + GG + S + G +
Sbjct: 1283 SGSFSYTVSDGAGGSSTATVTVKVSSTNGGATVTLGSQPYQASYLDGGSNTDELNGAAAS 1342
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +G + +D + G + ++V +G+D DG +G+D + + +
Sbjct: 1343 DFFIGGAASDTLRGGAGDDVLRGGAGDDTLDGGAGIDMLDLSDAGSGLAFTLAQGSGTLV 1402
Query: 329 DANEH--KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK-- 384
+ + D S++E + + IL + L G D+ +
Sbjct: 1403 NLSGVGLGSDNYSNMEGVIGSRFNDSLTGSGANDILRGGMGNDTLDGGAGIDLLDFSDAT 1462
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT--HGVKEGRNPDAFKA 442
F L + T + + D G+A + G R
Sbjct: 1463 GAINFTLVQSGSATTVNLGSVNLGTDNYRGMEGVIGSAFNDTLAGSAGNDVLRGGAGDDV 1522
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHF 470
+ A ++ L+ G D F
Sbjct: 1523 MSGGAGNDLLVGGAGADTLAGGSGSDTF 1550
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/282 (15%), Positives = 87/282 (30%), Gaps = 11/282 (3%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGY-VCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
S +T + +S + + Y S +D + G T+
Sbjct: 1297 SSTATVTVKVSSTNGGATVTLGSQPYQASYLDGGSNTDELNGAAASDFFIGGAASDTLRG 1356
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
+ G G + D L + + S Y
Sbjct: 1357 GAGDDVLRGGAGDDTLDGGAGIDMLDLSDAGSGLAFTLAQGSGTLVNLSGVGLGSDNYSN 1416
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
V + G+ + T+ G DLLD + G N
Sbjct: 1417 MEGVIGSRFNDSLTGS----------GANDILRGGMGNDTLDGGAGIDLLDFSDATGAIN 1466
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ + + S +++ N+ + +E V+GS+ ND + G++ N+V +G+DV G
Sbjct: 1467 FTLVQSGSATTVNLGSVNLGTDNYRGMEGVIGSAFNDTLAGSAGNDVLRGGAGDDVMSGG 1526
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+G D A + + + A+ D ++D +
Sbjct: 1527 AGNDLLVGGAGADTLAGGSGSDTFRILRADAASVDTITDFDL 1568
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 49/177 (27%), Gaps = 17/177 (9%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+LIG + L+ + + + + + V G GND ++G + + F
Sbjct: 12 SLIGTASSDTILSGNGNDYVSAGDGSDYVDAGNGDDIVEGGDGNDTLLGANGKDRVFGGR 71
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD----- 348
GND G +G D + + + ++ D L +AD
Sbjct: 72 GNDSLSGGNGTDAVY---GGSGDDVIGSADGASALYNGDNGGDTLYGDGYDSYADYLLGR 128
Query: 349 -------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++ + + G D+ G D
Sbjct: 129 GHESARPGNDRIHGGNGDDLIYGDNGDDAAVG--GDDIIAGGNGRDTVYGEGGNDTI 183
Score = 39.8 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 17/183 (9%), Positives = 36/183 (19%), Gaps = 1/183 (0%)
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + + + A D I+E + L+
Sbjct: 2 ATVTGTNGSDSLIGTASSDTILSGNGNDYVSAGDGSDYVDAGNGDDIVEGGDGNDTLLGA 61
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G+D + G D + + G
Sbjct: 62 NGKDRVFGGRGNDSLSGGNGTDAVYGGSGDDVIGSADGASALYNGDNGGDTLYGDGYDSY 121
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ + E D I+ + D + G + +Y +D
Sbjct: 122 ADYLLGRGHESARPGNDRIHGGNGDDLIYGDNGDDAAVGGDDIIAGGNGRDTVYGEGGND 181
Query: 495 LRN 497
Sbjct: 182 TIA 184
>gi|119487036|ref|ZP_01620908.1| putative alkaline phosphatase [Lyngbya sp. PCC 8106]
gi|119455965|gb|EAW37099.1| putative alkaline phosphatase [Lyngbya sp. PCC 8106]
Length = 734
Score = 100 bits (248), Expect = 9e-19, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 90/234 (38%), Gaps = 14/234 (5%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
D F Y+A++ D+ A +++ G HF G + R + + YL + ++
Sbjct: 6 DLFNEAFYLANNPDVEAAVEAG--IIESGFAHFIESGQFQVRQPSPLYSELDYLAANPNI 63
Query: 496 RNVFGSDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDH 553
R+ +H+I G E RNP F L Y+ + D+ + +H
Sbjct: 64 RDAVTQGIINNGFQHFIEFGQFERRNPSPLFDTLFYLTQNPDVNTIVNEGILT---AIEH 120
Query: 554 FSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG--ISG 609
F FG E R+ + +NP+ YL+ D+ D +HY+ G + R +S
Sbjct: 121 FVKFGQFEDRAPSLLYNPNYYLSQNPDVAVAVERDELTGIEHYLDIGAAQNRNFSAFLSP 180
Query: 610 MQFKSVMNLSEKS-RDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHDINH 662
+S + + L+ + ++ + D N+ + IN+
Sbjct: 181 DGSPFPNQVSVGDVTQTSAILLTRNTVSGEIEFEVSTDPNFTQIITSQIQPINN 234
Score = 90.6 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 10/174 (5%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
F+ YL + D+ + + H+I G + R P + L+Y+A++ ++ +A
Sbjct: 7 LFNEAFYLANNPDVEAAVEAGIIESGFAHFIESGQFQVRQPSPLYSELDYLAANPNIRDA 66
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
G HF FG E R + FD+ YL D+ + A H++
Sbjct: 67 VTQGIIN--NGFQHFIEFGQFERRNPSPLFDTLFYLTQNPDVNTIVNEGILTAIEHFVKF 124
Query: 514 GVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
G E R P + Y++ + D+ A G +H+ + G + R+ +
Sbjct: 125 GQFEDRAPSLLYNPNYYLSQNPDVAVAVERDELT---GIEHYLDIGAAQNRNFS 175
Score = 81.0 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 59/174 (33%), Gaps = 9/174 (5%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNV 414
+ + V + HF E G + R + YL + ++R+
Sbjct: 7 LFNEAFYLANNPDVEAAVEAGIIESGFAHFIESGQFQVRQPSPLYSELDYLAANPNIRDA 66
Query: 415 FGSDRG-AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+H+I G E RNP F L Y+ + D+ + +HF
Sbjct: 67 VTQGIINNGFQHFIEFGQFERRNPSPLFDTLFYLTQNPDVNTIVNEGILT---AIEHFVK 123
Query: 473 FGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
FG E R + ++ YL D+ D HY+ G + RN AF
Sbjct: 124 FGQFEDRAPSLLYNPNYYLSQNPDVAVAVERDELTGIEHYLDIGAAQNRNFSAF 177
>gi|218663528|ref|ZP_03519458.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Rhizobium etli IE4771]
Length = 886
Score = 100 bits (248), Expect = 1e-18, Method: Composition-based stats.
Identities = 84/530 (15%), Positives = 149/530 (28%), Gaps = 32/530 (6%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
DV S ITEL + R AL +S + E + F + N
Sbjct: 128 DVYIVDSASDAITELVSAGIDEIRTALAAYSIAALVNVEHLTYTGSANFTGTGNALANII 187
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + AD G G + + I A+ D
Sbjct: 188 TGGAGNDVLNGGIGADSLIGGAGNDVFIVDHVGDLITEAV-------------------D 228
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ +Y + D G A + +A GA L N ++
Sbjct: 229 EGTDTVRTTLANYTLGSDVENLTYTGATAFVGTGNNLANTIRGGAGADILDGNT-GADIL 287
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ I D D + + G L+ + + I +N+T A T +
Sbjct: 288 IGAAGNDTYIVDELADVVTEAINQGTDLIKTALSVYTLTDI-ANVENLTFA-GTGDFAGT 345
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-N 331
G+ + + G + N+ +GND G G D + + S + A
Sbjct: 346 GNGLANTITGGAGNDRLDGGAGNDRLVGGVGDDVYIVDSASDAITELVSAGTDEIRTALA 405
Query: 332 EHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ L +VE L + + +I+ A + L IG D F
Sbjct: 406 AYSIAALVNVENLTYTGSANFTGTGNALANIITGGAGNDVLNGGIGADSLIGGAGNDVFI 465
Query: 391 LSEGRDITFDSYL-YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+ DI ++ + ++ YI G + A+
Sbjct: 466 VDHAGDIVTEAANEGTDTVRTTLAIYTLGSNVEHLTYIGTAAFTGIGNSLDNTITGGAAA 525
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA-- 507
+ L + G D + V + + D+ + ++ A
Sbjct: 526 DTLSGGAGNDTLNGGAGADRLIGGTGNDTYIVDHAGDIVTEAADEGIDTVRTNLSAYTLG 585
Query: 508 -----RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
YI G + A+ + L + AG D
Sbjct: 586 VNVEHLTYIGTTAFVGTGNSLDNTITGGAAADTLSGGAGNDTLNGGAGAD 635
Score = 86.8 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 61/526 (11%), Positives = 135/526 (25%), Gaps = 7/526 (1%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D L+ +TE ++ + AL ++ E + F + NG T
Sbjct: 294 DTYIVDELADVVTEAINQGTDLIKTALSVYTLTDIANVENLTFAGTGDFAGTGNGLANTI 353
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D G+G + +A I +
Sbjct: 354 TGGAGNDRLDGGAGNDRLVGGVGDDVYIVDSASDAITELVSAGTDEIRTALAAYSIAALV 413
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ T ++ +++ + G +++ + + G GN+++ ++
Sbjct: 414 NVENLTYTGSANFTGTGNALANIITGGAGNDVLNGGIGADSLIGG----AGNDVFIVDHA 469
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
L + +G ++ + + G + TI +++
Sbjct: 470 GDIVTEAANEGTDTVRTTLAIYTLGSNVEHLTYIGTAAFTGIGNSLDNTITGGAAADTLS 529
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND + G + + +GND + D A + + +A + E
Sbjct: 530 GGAGNDTLNGGAGADRLIGGTGNDTYIVDHAGDIVTEAADEGIDTVRTNLSAYTLGVNVE 589
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
H + L A + L G D + +
Sbjct: 590 HLTYIGTTAFVGTGNSLDNTITGGAAADTLSGGAGNDTLNGGAGADRLIGGTGDDTYIVD 649
Query: 393 EGRDITFDSYL-YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
D+ ++ + + Y G + A ++
Sbjct: 650 NAGDLVTEAADAGTDTVRTTLASYTLGNNVENLTYTGSANFSGTGNALANTITGSAGNDV 709
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
L + G D + G VT + + + + +I
Sbjct: 710 LNGGTGADTLIGGAGNDTYIA--DNAGDMVTEAADAGTDTVRTILAAYTLGTNVENLTFI 767
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
G G + + L + + A D F
Sbjct: 768 GTGTFAGTGNTLNNVIVGGSGSNTLTGGDGNDILIGGAAADVFVYS 813
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/351 (13%), Positives = 90/351 (25%), Gaps = 33/351 (9%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + R L ++ + + E + F+ + N T
Sbjct: 553 DTYIVDHAGDIVTEAADEGIDTVRTNLSAYT--LGVNVEHLTYIGTTAFVGTGNSLDNTI 610
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D G G ++ + + D
Sbjct: 611 TGGAAADTLSGGAGNDTLNGGAGADRLIGGTGDD----------TYIVDNAGDLVTEAAD 660
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ SY + + G + +A A
Sbjct: 661 AGTDTVRTTLASYTLGNNVENLTYTGSANFSGTGNALANTITGSA-----------GNDV 709
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
T+ G+D + ++ T+ + + +
Sbjct: 710 LNGGTGADTLIGGAGNDTYIADN--AGDMVTEAADAGTDTVRTILAAYTLGTNVENLTFI 767
Query: 273 GSS--------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G+ N+V++G S +N GND+ G + D F Y A I F
Sbjct: 768 GTGTFAGTGNTLNNVIVGGSGSNTLTGGDGNDILIGGAAADVFVYSANWGHDTITNFVAT 827
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+DA +D E L A + + + + +
Sbjct: 828 GSAHDAISIDHGIFADWEALFAATEQSGNDTIITADSDNTITLRNVALSSL 878
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/354 (12%), Positives = 87/354 (24%), Gaps = 9/354 (2%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWSSIGGYEKNMTIAQ- 264
+ G+D + + V DL + SS +
Sbjct: 28 DTLDGKAGADILIGGVGNDTYIVDDVADVVTERPNEGADLTKTALSSYALPNNVENLTFI 87
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T + G+ + + G + N+ +GND G G D + + S
Sbjct: 88 GTGDFAGTGNRLANTITGGAGNDRLDGGAGNDRLVGGVGDDVYIVDSASDAITELVSAGI 147
Query: 325 IIVYDA-NEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFES 382
+ A + L +VE L + + +I+ A + L IG D
Sbjct: 148 DEIRTALAAYSIAALVNVEHLTYTGSANFTGTGNALANIITGGAGNDVLNGGIGADSLIG 207
Query: 383 MKHFYEFGLSEGRDITFDSYL-YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
F + D+ ++ + + Y G +
Sbjct: 208 GAGNDVFIVDHVGDLITEAVDEGTDTVRTTLANYTLGSDVENLTYTGATAFVGTGNNLAN 267
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
+ A + L + G D + + + L
Sbjct: 268 TIRGGAGADILDGNTGADILIGAAGNDTYIVDELADVVTEAINQGTDLIKTALSVYTLTD 327
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ G G + A ++ L + + G D +
Sbjct: 328 IANVENLTFAGTGDFAGTGNGLANTITGGAGNDRLDGGAGNDRLVGGVGDDVYI 381
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 61/415 (14%), Positives = 114/415 (27%), Gaps = 46/415 (11%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
V+D+V + GA + Y + ++ FI T +G + L T+ GG N
Sbjct: 53 VADVVTERPNEGADLTKTALSSYALPNNVENLTFIGTGDFAGTGNRLANTITGGAGNDRL 112
Query: 245 LNTESWSSIGGYEKNM-----------------------------TIAQHTVIESVV-GS 274
+ G + +IA +E +
Sbjct: 113 DGGAGNDRLVGGVGDDVYIVDSASDAITELVSAGIDEIRTALAAYSIAALVNVEHLTYTG 172
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
S N GN+ N+ +GNDV +G G D+ + ++ +A +
Sbjct: 173 SANFTGTGNALANIITGGAGNDVLNGGIGADSLI--GGAGNDVFIVDHVGDLITEAVDEG 230
Query: 335 QDFL----------SDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESM 383
D + SDVE L + + + A + L G D+
Sbjct: 231 TDTVRTTLANYTLGSDVENLTYTGATAFVGTGNNLANTIRGGAGADILDGNTGADILIGA 290
Query: 384 KHFYEFGLSEGRDITFDSYL-YLGSYDDLRNVFGSDRGAAARH--YITHGVKEGRNPDAF 440
+ + E D+ ++ +V+ A + + G G
Sbjct: 291 AGNDTYIVDELADVVTEAINQGTDLIKTALSVYTLTDIANVENLTFAGTGDFAGTGNGLA 350
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
+ A ++ L + + VG D + + +
Sbjct: 351 NTITGGAGNDRLDGGAGNDRLVGGVGDDVYIVDSASDAITELVSAGTDEIRTALAAYSIA 410
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ Y G + A ++ L + AG D F
Sbjct: 411 ALVNVENLTYTGSANFTGTGNALANIITGGAGNDVLNGGIGADSLIGGAGNDVFI 465
>gi|3062797|dbj|BAA25683.1| Insecticidal protein [Serratia marcescens]
Length = 172
Score = 99.9 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 52/152 (34%), Gaps = 14/152 (9%)
Query: 43 DITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN-----GYVCTPRYDSR 97
++ QE A+ +L W+ V ++ F E + N Y P +
Sbjct: 21 GLSAFTQQQQEQAKLSLQSWADVANIKFVEVAAGQPSNITFGNYEGTGQAYALKPFSYNG 80
Query: 98 Y-------FMEINFD-KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYG 148
+ ++ K G HE+GH LGL HPG+YN G
Sbjct: 81 NDYRGFNSDGQSWYNIKNHSENLHPELGNYGRLTITHEVGHTLGLDHPGTYNAGQGSPNY 140
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
Y D+ SVMSY+ + D Y
Sbjct: 141 TKAVYAEDTRQFSVMSYWNESITNADHGHYYA 172
>gi|238623406|emb|CAS06697.1| alkaline metalloprotease [Pseudomonas fluorescens bv. C]
Length = 186
Score = 99.9 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 58/172 (33%), Gaps = 16/172 (9%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
+ F+ ++ + + A A+ W+ V +TF E + D
Sbjct: 9 LTYTFLTSASQATMNKHGITGFSQFSNLQKGQAVLAMQSWADVAKVTFTEKASGGDFHMT 68
Query: 83 SSNN--------GYVCTPRYD-----SRYFMEINF--DKADVWRYGIGKGTILSHNALHE 127
N + P + S + + + G HE
Sbjct: 69 FGNYSGGQDGAAAFAYLPGTNDKYHTSGTDGTSWYLINNSYTANINPGLNNYGRQTLTHE 128
Query: 128 IGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
IGH LGL HPG YN G D DY D+ SVMSY+ ++ + + G
Sbjct: 129 IGHTLGLDHPGDYNAGTGNPSYRDADYGQDTRGYSVMSYWSEFNTNQNFTKG 180
>gi|89054048|ref|YP_509499.1| hypothetical protein Jann_1557 [Jannaschia sp. CCS1]
gi|88863597|gb|ABD54474.1| hypothetical protein Jann_1557 [Jannaschia sp. CCS1]
Length = 681
Score = 99.9 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 71/333 (21%), Positives = 113/333 (33%), Gaps = 53/333 (15%)
Query: 9 TTERIADHLLRDQYW---SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
T + + D L D W + I + + ++ E P +
Sbjct: 14 TGDDLIDGLASDFKWQLDATRTIDWTLSDGLSGETWYNPGEFIP----LFAGLFDGIEPF 69
Query: 66 VDLTF----------EETSIHSDIKFISSNN----------GYVCTPRYDSRYFMEINFD 105
+D+ F + SDI + P+ S EI F+
Sbjct: 70 IDVDFRYVGYHSHPDVAIAQGSDINLTWDDANALFSSPNTWALAFFPQPGSLPRGEIYFN 129
Query: 106 KADVWRY--GIGKGTILSHNALHEIGHALGLMHPG-SYNGGYPVYGVDNDYENDSFLTSV 162
Y G+ LHE+GHALGL HP G P + + D + +V
Sbjct: 130 SRSDLNYQSSYAPGSQGFFVPLHEVGHALGLKHPFDDGGTGRPNFESLGLGKFDLDMYTV 189
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQT 221
MSY + + AT M+ D++ +Q +YGA + GN+ Y T
Sbjct: 190 MSYSDNDTTDLAYD---PATFMILDVLTLQHLYGANASQNTGNDSY----TLVRDDLYDT 242
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV-------------- 267
IYD+ G D +D + YI+L S++ M ++
Sbjct: 243 IYDAAGRDAIDQSSALEGW-YIELPDVYLSTVVDTRAGMAMSMAASALAVPTDLTWLAGD 301
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
IE GS D++ G+ N G+D+ G
Sbjct: 302 IEDATGSGFADIIFGSGLANDVSGLGGDDILSG 334
>gi|221369544|ref|YP_002520640.1| Hemolysin-type calcium-binding region, RTX [Rhodobacter sphaeroides
KD131]
gi|221162596|gb|ACM03567.1| Hemolysin-type calcium-binding region, RTX [Rhodobacter sphaeroides
KD131]
Length = 2626
Score = 99.9 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/302 (16%), Positives = 92/302 (30%), Gaps = 6/302 (1%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + + S G D++ + GG N + G E N ++
Sbjct: 2075 NLEGTDGADLLTGSRGADVISGRMFNDTLIGGAGNDTLFGGGDDDRLYGNEGNDSLYGEA 2134
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G G+D+V+G N+ GND G +G DT Y + +
Sbjct: 2135 GNDWLHGGQGDDLVVGGDGNDTLAGGLGNDTLQGGAGNDTASYETATEGVTVSLVLQGEG 2194
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ D L+ +E L + + + ++L A + L+ G D +
Sbjct: 2195 QLVNAQEGYDLLTSIENLTGSRYNDTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGEGN 2254
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
S + G + G D ++ I + + A L +
Sbjct: 2255 DIADYSAATGGVTVNLARDGLAQVIGADQGIDVLSSIEGVIGSSSNDILSGSAVANLIFG 2314
Query: 447 ASHEDLI-NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
DLI A + L G D ++ + G + V G+
Sbjct: 2315 GDGADLITGAAGNDTILGGAGSDSLYGNLGDDLLYGDLGDDWIHGGQGNDTVVGGAGDDT 2374
Query: 506 AA 507
A
Sbjct: 2375 LA 2376
Score = 87.9 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 72/552 (13%), Positives = 134/552 (24%), Gaps = 70/552 (12%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
F +T I G + D G G ++ + +
Sbjct: 2099 FNDTLIGGAGNDTLFGGGDDDRLYGNEGNDSLYGEAGNDWLHGGQGDDLVVGGDGNDTLA 2158
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
LG G YE + +V + +++A GY + ++
Sbjct: 2159 GGLGNDTLQGGAGNDT-----ASYETATEGVTVSLVLQGEGQLVNAQEGYDLLTSIENLT 2213
Query: 190 AVQKIYGAPKGSLGN------NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+ +G+ + T+ G+D+ D + G
Sbjct: 2214 GSRY----NDTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGEGNDIADYSAATGGVTVN 2269
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
IG + + + IE V+GSS ND++ G++ N+ F G D+ G++G
Sbjct: 2270 LARDGLAQVIGADQGIDVL---SSIEGVIGSSSNDILSGSAVANLIFGGDGADLITGAAG 2326
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT + +Y ++Y +
Sbjct: 2327 NDTIL--GGAGSDSLYGNLGDDLLYGD--------------------------LGDDWIH 2358
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ ++ G D EG D G DL + R +A
Sbjct: 2359 GGQGNDTVVGGAGDDTLAGGLGDDVVDGGEGIDTVEFQTATAGVTVDLSLQGQAQRISAE 2418
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
T E + + ++I+ A ++ + G
Sbjct: 2419 EGMDTLFSIENILGSRYDDRLLGDAGSNVIDGSAGNDTVMGQAGEDLIFGGDGNDSLYGN 2478
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
L +G L A ++ L D
Sbjct: 2479 QDNDTLV--------------------GGNGNDWLHGGQGNDLLVGDAGNDTLNGGVGDD 2518
Query: 544 PDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+ G D G + F + D F E
Sbjct: 2519 VLVGGQGFD--LLTGGTGADTFVFGSLDSADA--DRITDFEQGVDRILIADQLMWALENA 2574
Query: 604 ALGISGMQFKSV 615
L ++ +
Sbjct: 2575 ELNLADQIVWNA 2586
>gi|300864082|ref|ZP_07108981.1| hypothetical protein OSCI_590002 [Oscillatoria sp. PCC 6506]
gi|300337898|emb|CBN54127.1| hypothetical protein OSCI_590002 [Oscillatoria sp. PCC 6506]
Length = 1252
Score = 99.9 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/415 (13%), Positives = 111/415 (26%), Gaps = 37/415 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG-KGTILSHNALHEIGHALG 133
+ + + + + + + D+ G + +I A+
Sbjct: 828 GTTQLTIGTGQSAVDFNLNAVNDQITDTTWKTVDLTAAATGYTDGRTKVTVIDDITAAIP 887
Query: 134 L---MHPGSYNGGYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA------ 181
+ P P + N++ + + + D F Y
Sbjct: 888 VLPSESPAPIPSASPTPIPINNTPNVSNNTRPDNPILTPLTFDGGSSFIFNYPTDNATFG 947
Query: 182 -----TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
T +D + G LG Y+ + + +++ D L +
Sbjct: 948 TSIGDTLAGNDGNDILIGAGGDDSLLG---YQGDDILDATSGNDSLFGGKDRDTL----L 1000
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + E + G T+ T +++ G+SGND V GN +++ + + GND
Sbjct: 1001 AGGDRDLVWGGEGADILDGGVDGDTLFGGTENDTLYGNSGNDSVYGNEGDDLIYGNDGND 1060
Query: 297 VFDGSSGLDTFFYYAP-----SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G+ G DT + + + F + + D+LS
Sbjct: 1061 SLYGNQGGDTISGWEGEDSVFAGKDNDFVFAGEGNDFVCGDLGDDYLSG------EAGDD 1114
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSYDD 410
+ + + + L G D + EGRD+ F G
Sbjct: 1115 ELCGREGDDTIYGGLGADTLNGDSGNDTLIGGAGNDQLQGGEGRDVFIFSDLSDNGDTIL 1174
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ G NP K L + D
Sbjct: 1175 DFAAGDGGDVLNLQSVFNKLSYTGSNPIDDKFLRLVQVGSDAELQIDSDGANTAN 1229
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/322 (13%), Positives = 82/322 (25%), Gaps = 70/322 (21%)
Query: 228 DDLLDLTLIGGVKNYIDLN---TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
++ +++ N I S I Y + ++ +++ G+ GND++IG
Sbjct: 908 NNTPNVSNNTRPDNPILTPLTFDGGSSFIFNYPTDNATFGTSIGDTLAGNDGNDILIGAG 967
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++ G+D+ D +SG D+ F +D + E
Sbjct: 968 GDDSLLGYQGDDILDATSGNDSL-------------FGGKDRDTLLAGGDRDLVWGGE-- 1012
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
IL+ + L D +EG D+ + +
Sbjct: 1013 -------------GADILDGGVDGDTLFGGTENDTLYGNSGNDSVYGNEGDDLIYGNDG- 1058
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
D L G D + G EG + D + A +
Sbjct: 1059 ---NDSLYGNQGGDTIS--------GW-EGEDSVFAG------KDNDFVFAGEGNDFVCG 1100
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
D + + + + + Y G
Sbjct: 1101 DLGDDYLSGEAGDDELCGREGDDTI--------------------YGGLGADTLNGDSGN 1140
Query: 525 KALEYIASHEDLINAFADAPDL 546
L A ++ L +
Sbjct: 1141 DTLIGGAGNDQLQGGEGRDVFI 1162
>gi|170739969|ref|YP_001768624.1| endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46]
gi|168194243|gb|ACA16190.1| Endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46]
Length = 1795
Score = 99.9 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 63/444 (14%), Positives = 116/444 (26%), Gaps = 34/444 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
TI G+D + ++ G + + E + G E N ++
Sbjct: 1338 GDTLTGGAGEDTILGGAGNDFASGRSGNDSVSGEAGDDLVFGDEGDDVVDGGEDNDRVSG 1397
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYK 317
+ V GS+G+D+V G ++V GND G +G D+ + + +
Sbjct: 1398 GAGADRVFGSAGSDLVFGEQGDDVVGAGEGNDFASGGAGNDSVSGEAGDDYVFGDEGDDQ 1457
Query: 318 IYRFENAIIVYDA-------NEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ E +Y + D L D ++L D +L
Sbjct: 1458 LSGGEGRDSLYGGLGNDVLTGDAGHDVLLGEQDDDQLIGGDGDDSLDGGDGADLLCGNDG 1517
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ L G+D +G D F + + + +
Sbjct: 1518 ADGLWGGAGKDQLYGGAGADTLDGGDGADTLFGNEGADWMAGQAGDDALVGGDGSDSLFG 1577
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
G AL + L + + G D + F +
Sbjct: 1578 GDGNDWLVGEAGDDALVGGQGSDSLFGGVGNDWLAGEGGDDLLIGGEGNDSLFGGAGADW 1637
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
G D V G G L A ++ L +
Sbjct: 1638 LEGQAGDDALVGGEGDDVLR---GGEGNDWLDGEAGNDVLVGGAGNDGLRGGDGADWLVG 1694
Query: 548 QAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
+AG D + G + Y D + ++T G E +
Sbjct: 1695 EAGSD--TLSGGAGDDVLFGGAGSDTVQYA------SGDGRDVVRDFVTGG-AERDVIAF 1745
Query: 608 SGMQFKSVMNLSEKSRDKADLSLS 631
F S + ++ ++
Sbjct: 1746 GPGLFGSFAAVQAATQQVGADAVI 1769
Score = 89.1 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/380 (12%), Positives = 92/380 (24%), Gaps = 32/380 (8%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ D G + + LG G + G
Sbjct: 1428 NDFASGGAGNDSVSGEAGDDYVFGDEGDDQLSGGEGRDSLYGGLGNDVLTGDAGHDVLLG 1487
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+D + ++ + G + ++YG
Sbjct: 1488 EQDDDQLIGGDGDDSLDGGDGADLLCGNDG---ADGLWGGAGKDQLYGGA---------- 1534
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T++ + G D + G + + + S+ G + N +
Sbjct: 1535 GADTLDGGDGADTLFGNEGADWM----AGQAGDDALVGGDGSDSLFGGDGNDWLVGEAGD 1590
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++VG G+D + G N+ G+D+ G G D+ F + + +
Sbjct: 1591 DALVGGQGSDSLFGGVGNDWLAGEGGDDLLIGGEGNDSLF--GGAGADWLEGQAGDDALV 1648
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D L E +L A + L G D
Sbjct: 1649 GG--EGDDVLRGGE------GNDWLDGEAGNDVLVGGAGNDGLRGGDGADWLVGEAGSDT 1700
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G D+ F G+ D D R ++T G + A+
Sbjct: 1701 LSGGAGDDVLFG-----GAGSDTVQYASGDGRDVVRDFVTGGAERDVIAFGPGLFGSFAA 1755
Query: 449 HEDLINAFADAPDLVQVGKD 468
+ + +
Sbjct: 1756 VQAATQQVGADAVITAGVGE 1775
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/347 (14%), Positives = 86/347 (24%), Gaps = 24/347 (6%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ D L L V + T + ++ G TI + G SGND
Sbjct: 1307 ADFFDQTSDHDPLLARLAIPVVGRLLTGTAAGDTLTGGAGEDTILGGAGNDFASGRSGND 1366
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V G + +++ F G+DV DG D + +++ + +V+
Sbjct: 1367 SVSGEAGDDLVFGDEGDDVVDGGEDNDRV--SGGAGADRVFGSAGSDLVFG--------- 1415
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ A + + G D + + EGRD
Sbjct: 1416 --------EQGDDVVGAGEGNDFASGGAGNDSVSGEAGDDYVFGDEGDDQLSGGEGRDSL 1467
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+ D + + G D L + L
Sbjct: 1468 YGGLGNDVLTGDAGHDVLLGEQDDDQLIGGDGDDSLDGGDGADLLCGNDGADGLWGGAGK 1527
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
G D + F + G D V G + + G
Sbjct: 1528 DQLYGGAGADTLDGGDGADTLFGNEGADWMAGQAGDDALVGGDGSDSL---FGGDGNDWL 1584
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
AL + L + + G D G E S+
Sbjct: 1585 VGEAGDDALVGGQGSDSLFGGVGNDWLAGEGGDD--LLIGGEGNDSL 1629
>gi|170744302|ref|YP_001772957.1| glycosyl transferase family protein [Methylobacterium sp. 4-46]
gi|168198576|gb|ACA20523.1| glycosyl transferase family 2 [Methylobacterium sp. 4-46]
Length = 987
Score = 99.5 bits (246), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 74/242 (30%), Gaps = 51/242 (21%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
+ FD Y Y D+ G HY++ G KEGR+P F L Y H
Sbjct: 15 VHFDERFYRLRYPDV----GVAGADPFAHYMSFGWKEGRDPSPSFPTLLYKDKHL----- 65
Query: 456 FADAPDLVQVGKDHFSN-FGCEEGRFVTFDSYLYLGSYDDLR-----------NVFGSDR 503
P H++ E R V F + + +
Sbjct: 66 ---GPTPRTNPLAHYAARPEAERQRAVAFSAEEAVAIQARVVRDHFDEAFYRDAARLDAG 122
Query: 504 GAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA--FADAPDLVQAG-KDHF----- 554
A HY+T G +EG P F + + H + + G DH
Sbjct: 123 ADALTHYLTVGWREGYEPAPGFSSAAHAGKHRHIAATGLCPFYHFVSTYGLLDHPEPLEA 182
Query: 555 -SNFGYEEGR------------SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
G GR + F+ YLT Y D+ +HY+ G KE
Sbjct: 183 ALACGASGGRARVSRPVVLSTIAQEFDRASYLTRYADVRQ----SGIDPVEHYVDFGWKE 238
Query: 602 GR 603
GR
Sbjct: 239 GR 240
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 53/163 (32%), Gaps = 33/163 (20%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD Y Y D+ G HY++ G KEGR+P F L Y H L
Sbjct: 17 FDERFYRLRYPDV----GVAGADPFAHYMSFGWKEGRDPSPSFPTLLYKDKH--LGPTPR 70
Query: 542 DAPDLVQAGKDHFSNFGYEE-GRSITFNPD-------------LYLTSYDDLWNVFGSDR 587
P H++ E R++ F+ + Y D +
Sbjct: 71 TNPL------AHYAARPEAERQRAVAFSAEEAVAIQARVVRDHFDEAFYRDAARL--DAG 122
Query: 588 SAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSL 630
+ A HY+T G +EG S + K R A L
Sbjct: 123 ADALTHYLTVGWREGYE----PAPGFSSAAHAGKHRHIAATGL 161
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ ++ + T + I + ++H+ +FG EGRD + + G Y
Sbjct: 200 VLSTIAQEFDRASYLTRYADVRQSGI-----DPVEHYVDFGWKEGRDP--SEWFWTGFYR 252
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
+ + D HY+T G G P+ F E+
Sbjct: 253 EEQAPHLGDAVNPFYHYLTEGRPAGLLPNPFGCGEWPP 290
>gi|119383048|ref|YP_914104.1| hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
gi|119372815|gb|ABL68408.1| Hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
Length = 589
Score = 99.1 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 83/296 (28%), Gaps = 35/296 (11%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + T+ G+D ++ GG + + I G N TI
Sbjct: 49 DGADGVNDWINAGAGNDTVNGGAGNDTIE----GGEGDDLLRGNAGHDIIRGDAGNDTIN 104
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++ G G+D++ G++ ++V GND F+G G DT L + ++
Sbjct: 105 GDAGNDTIEGGEGDDLLRGDAGDDVLRGGEGNDTFNGGIGNDTIEGEEGDDLLRGDDGDD 164
Query: 324 AIIVYDANE-----------------------HKQDFL---SDVERLRFADQCIDSVNVK 357
++ ++ D L + + L + +
Sbjct: 165 LLLGGVGSDTLNGGLGNDTLDGGDDDDLLRGDDGNDLLLGGAGNDTLNGGNGDDTLEGGE 224
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD-----ITFDSYLYLGSYDDLR 412
+L A ++ L G D E + +G D D+ D
Sbjct: 225 GDDLLRGDAGHDLLQGGDGNDTLEGGQGNDVLEGGDGDDSLIGGPGADTMTGGAGNDRFV 284
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
G D G + N D + A+ +
Sbjct: 285 VSGGGDLITDFDAVTGIGDGQSDNNDFVDLNAFYNGTTLAAWNAANPHQTYASPES 340
Score = 72.1 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/340 (13%), Positives = 78/340 (22%), Gaps = 62/340 (18%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGG---YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ +D + G ++ ++ V + + +GND V G + N+
Sbjct: 17 FSSSAQPDGIVDGTDGDDYMVPGYVDHQGDVVDGADGVNDWINAGAGNDTVNGGAGNDTI 76
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G+D+ G++G D + D ++
Sbjct: 77 EGGEGDDLLRGNAGHDII----------------------RGDAGNDTING------DAG 108
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ +L A + L G D F EG D+
Sbjct: 109 NDTIEGGEGDDLLRGDAGDDVLRGGEGNDTFNGGIGNDTIEGEEGDDLLRGDDGDDLLLG 168
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ + + R D L A ++ L D G D
Sbjct: 169 GVGSDTLNGGLGNDTLDGGDDDDLLRGDDGNDLLLGGAGNDTLNGGNGDDTLEGGEGDDL 228
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
D+ L D G LE
Sbjct: 229 LRG-----------DAGHDLLQGGD-------------------GNDTLEGGQGNDVLEG 258
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
+ LI AG D F G + F+
Sbjct: 259 GDGDDSLIGGPGADTMTGGAGNDRFVVSGGGDL-ITDFDA 297
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 45/383 (11%), Positives = 78/383 (20%), Gaps = 98/383 (25%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
D LLR ++ R
Sbjct: 81 GDDLLRGN----------------------------AGHDIIR----------------- 95
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + T + DV R G G T I
Sbjct: 96 --GDAGNDTINGDAGNDTIEGGEGDDLLRGDAGDDVLRGGEGNDTFNGGIGNDTIE---- 149
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ D+ ++ +D++
Sbjct: 150 ---GEEGDDLLRGDDGDDLLLGGVGSDTLNGGLGNDTLDGGDDDDLLRGDDGNDLL---- 202
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+ GA T+ GDDLL +
Sbjct: 203 LGGA-----------GNDTLNGGNGDDTLEGGEGDDLLR-------------GDAGHDLL 238
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N +++ G GNDV+ G ++ G D G +G D F
Sbjct: 239 QGGDGN---------DTLEGGQGNDVLEGGDGDDSLIGGPGADTMTGGAGNDRFVVSG-- 287
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSILEYTASY 368
I F+ + D DF+ + L +
Sbjct: 288 GGDLITDFDAVTGIGDGQSDNNDFVDLNAFYNGTTLAAWNAANPHQTYASPESWMQADQA 347
Query: 369 EDLIQVIGQDVFESMKHFYEFGL 391
+ ++ +G + G
Sbjct: 348 DGVLDAVGGLRIQDGTGNSVLGS 370
>gi|325144664|gb|EGC66962.1| iron-regulated protein FrpA [Neisseria meningitidis M01-240013]
Length = 1429
Score = 99.1 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 72/497 (14%), Positives = 135/497 (27%), Gaps = 71/497 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 865 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 924
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 925 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 984
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 985 VLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 1040
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + + + G GND + G N+ +GND +G SG
Sbjct: 1041 IYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 1100
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 1101 SDTYVFGKGFGQDAVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 1160
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 1161 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGD 1220
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D N + Y +G
Sbjct: 1221 DYLYGADGDDLLNGDAGND-----SIYSGNGNDTLNGGEGNDAL----YGYNGNDALNGG 1271
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ L ++ LI + G D + FG G+ ++ ++ D
Sbjct: 1272 EGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV-FGKGFGQDTVYN--YHVDKNSDTM- 1327
Query: 498 VFGSDRGAAARHYITHG 514
AA H+I G
Sbjct: 1328 -HFKGFKAADVHFIRSG 1343
>gi|89068815|ref|ZP_01156198.1| calcium binding hemolysin protein, putative [Oceanicola granulosus
HTCC2516]
gi|89045585|gb|EAR51648.1| calcium binding hemolysin protein, putative [Oceanicola granulosus
HTCC2516]
Length = 10858
Score = 98.7 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 66/466 (14%), Positives = 120/466 (25%), Gaps = 31/466 (6%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
R+ + + G+ G L G + +
Sbjct: 7748 RFAPGFTGPVTIQYRIADEEGLEDVGFAYATVSDYYGGELTGSPLIDVIEGNALSETIHG 7807
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN---NIYKI 209
Y D + V + + DA DI+ GA G+ +
Sbjct: 7808 YRADDW---VRALGGDDTILTDAGDDLIEAGAGDDIIDAGD--GADDIFGGDGFDTVRFT 7862
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T+ GG D + ++GG + ++ +
Sbjct: 7863 GSNTGVRADLATVIGQGGYAQGDFYESVEALE----GSAFSDTLGGDAGDNWLSGVDGHD 7918
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +G+D ++G + ++ +G D G +G DT Y + I +
Sbjct: 7919 ELTGRAGDDTLLGGAGDDTLDGGAGGDALFGGAGDDTARYETSAAGVVISLLDGTAT--- 7975
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ D L +E L D + L + L G D+ +
Sbjct: 7976 GGDAAGDVLVGIENLVGTDHADSLTGDDGGNALFGGRGDDALTGGDGDDLLAGGRGADIL 8035
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G D + G DL S G EG + ++
Sbjct: 8036 SGGAGTDTADYTLSLGGISIDLAAGTASG-----------GDAEGDTLSGIEIIQGSFHD 8084
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ L AD G D + G + Y + + G A
Sbjct: 8085 DSLTGDAADNTFRGSRGADTMAG-----GDGIDTADYAFADEAVAVNLATGQGTAGEAAG 8139
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ G++ + A + F D G D +
Sbjct: 8140 DVLSGIERLVGSFHADTFDGSAGDDIFDGRFGDDLLRGAGGSDDYV 8185
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/362 (12%), Positives = 100/362 (27%), Gaps = 40/362 (11%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + ++ T + + D + G G +I +
Sbjct: 5557 AAANGGDAQSIESDATGETIDAGAGDDTLTDLGGDDSFSGGTGDDSIEGGAGDDTLAGGP 5616
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G S G VY D + + + A+ + SDI V
Sbjct: 5617 G-DDTLSDASGDDVYHFAAGDGQDRIEDLAGLDRIELGAGIAAADVRVSQQGGSDI--VL 5673
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ G + +L + + + + D+L L G T + +
Sbjct: 5674 HLPGEERITLAG-ALSDPDRAIEEVRLFSGVSWTFADILAAALAGSEARDEITGTGAGET 5732
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + ++ +++ G +G+D ++G N++ +G D +G +G D + + A
Sbjct: 5733 LAGLGGDDSLDGQGGDDTLFGGAGSDELVGGDGNDLLEGGAGLDSLEGGAGDDIYRFDAG 5792
Query: 313 SYLYKIYRFENAIIVYDANE----------HKQDFLSD-----------------VERLR 345
I + + D + +E +
Sbjct: 5793 DGQDIIDDASGLDRLEFGPGIAPGDVDVGKTETDLILRLPGEERVTIRDAFGSGVIETVA 5852
Query: 346 FADQCI---------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
FAD + + T + LI + G D + D
Sbjct: 5853 FADGTLWSAADLRARATAGTAGDDSYSGTEGDDTLIGLGGDDSLFGLGGDDSLSGGADDD 5912
Query: 397 IT 398
+
Sbjct: 5913 LL 5914
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/323 (13%), Positives = 87/323 (26%), Gaps = 36/323 (11%)
Query: 57 WALGEWSKVVDLTFE-----ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWR 111
AL D TF ET S T + D+ DV+R
Sbjct: 3957 LALAWVPSDADQTFTGGSSSETLSGGGGNDSLSGLDGEDTLTGGPGNDVLSGGDRNDVYR 4016
Query: 112 YGIG-------KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
+ +G + + + G V + D +T +
Sbjct: 4017 FEVGFGQDIVSDDGWSTRSGADVLSFGPGFSADDLEARADGADLVVSFSGRDERVTIARA 4076
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
+ F T +D++A G+ G+++ + ++
Sbjct: 4077 LEHSDFIVETLLFDDGTTVAFADLLAR-----VQAGTAGDDL------LPGTQAGDSLAG 4125
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GDD L + + T+ +++ G +GND + G+
Sbjct: 4126 LAGDDTLTGNNGDDDLDG-------------GAGDDTLTGGAGADTLTGGAGNDSLTGDD 4172
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ +G+D G DT+ + + + + + D + E
Sbjct: 4173 GADTLTGGAGDDSLTGGRHDDTYLFAPGFGHDSLLEHDGSSSWSGNDTVVFDGILSTEVT 4232
Query: 345 RFADQCIDSVNVKQRSILEYTAS 367
+ D + L +
Sbjct: 4233 VYIDGDDLVLATDAGDELRLVDT 4255
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 69/562 (12%), Positives = 129/562 (22%), Gaps = 86/562 (15%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
ETS+ D + + D G G + +
Sbjct: 5253 VETSLGDDTIL---GTADSDLLDGLAGNDVLQGGAGRDTLIGGAGNDDLAGGTGRDILTD 5309
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
A G Y G + + + D L + +P D + G ++D
Sbjct: 5310 ADG-DDVYRYALGDGIDRITDLAGFDRLLFG--AGIVPSDVTVSGRDGADLVLRLADGGR 5366
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
++ I + + + + G D + + + ID
Sbjct: 5367 IELIGALGDAAQAIEEVAFADGTVWTRADLIGFATAGTDAVQRLHGSDLGDSID-AGGGD 5425
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S+ G + +++ + ++ + G +G+D + + DT+ +
Sbjct: 5426 DSVFGGLGDDSLSGGSGMDRLEGGAGDDTLAAGPGGGTLLGGA---------DDDTYRFA 5476
Query: 311 APSYLYKIYRFENAIIV------------------------------YDANEHKQDFLSD 340
A + + + D ++
Sbjct: 5477 ASDGQVIVEDSAGTDRIEMDAGLAPADVSVHPSGDDLVLRVDGTEARLVLRGARADATAE 5536
Query: 341 VERLRFADQCI---------------------------DSVNVKQRSILEYTASYEDLIQ 373
+E++ FAD + L +
Sbjct: 5537 IEQVVFADGTVWTPATLRALAAANGGDAQSIESDATGETIDAGAGDDTLTDLGGDDSFSG 5596
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D E G D D+ S DD+ + D E
Sbjct: 5597 GTGDDSIEGGAGDDTLAGGPGDDTLSDA-----SGDDVYHFAAGDGQDRIEDLAGLDRIE 5651
Query: 434 -GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR-----FVTFDSYL 487
G A D++ + G + EE R TF L
Sbjct: 5652 LGAGIAAADVRVSQQGGSDIVLHLPGEERITLAGALSDPDRAIEEVRLFSGVSWTFADIL 5711
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
+ GA G L A ++L+ +
Sbjct: 5712 AAALAGSEARDEITGTGAGETLAGLGGDDSLDGQGGDDTLFGGAGSDELVGGDGNDLLEG 5771
Query: 548 QAGKDHFSNFGYEEGRSITFNP 569
AG D S G F+
Sbjct: 5772 GAGLD--SLEGGAGDDIYRFDA 5791
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 41/239 (17%), Positives = 64/239 (26%), Gaps = 7/239 (2%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
I G +++ I + + G G+D + G +++ +G+D DG G D
Sbjct: 10553 GNDRITGSQQDDVIDGGFGKDRIAGEGGDDRLFGGWSDDRLEGGAGDDTLDGGRGRDRLE 10612
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
A + I E A D +E + + + V L
Sbjct: 10613 GGAGDDTFLIRGTEAARERIDGGSG----FDAIEVVAGSGRLTHDRLVVDDVELFDGNGA 10668
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD--RGAAARHY 426
E G + S D + D + FG D RG
Sbjct: 10669 EVRGTARGDRIDFSGFDTVREVAVIDGWFGNDDIIGSRQGDSIEGGFGRDELRGEGGDDR 10728
Query: 427 ITHGVKEGR-NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
I G + A + S D + AD V FD
Sbjct: 10729 IDGGWSDDELFGGAGDDVLIGGSGNDELWGGADDDTFVFNRLYDIGRSARRTDEIGDFD 10787
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/264 (12%), Positives = 70/264 (26%), Gaps = 15/264 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + T+ E + G G+DV+ G S N+ F +G+D G G D
Sbjct: 4934 LTGTASDDTLTGTDAWERLSGGDGDDVLSGGSGNDSLFGGNGDDSLTGGGGDDALSDDGG 4993
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
Y + + + + S + I + A+ D +
Sbjct: 4994 GATYLFSAGFGQDTITHRLDPAAPGVIVFDATVSPGDISVSGGGEFDDITLHFANGADRL 5053
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
++ ++ +G T + + ++ G +
Sbjct: 5054 TILSWGPDDASYGIDRVDFHDGTSWTAADLAAMAADAGGVSLEGDNPPVP---------- 5103
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ L + + G+D ++ D+ +Y S
Sbjct: 5104 --EGGAGDDTITGSDGDNRLAGHGGNDSLVGLRGRDTLVGGAGDDTLDGGRDADIYEFSA 5161
Query: 493 D---DLRNVFGSDRGAAARHYITH 513
DL G + +
Sbjct: 5162 GFGQDLITNTGWTSASDEVVFDAT 5185
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/341 (14%), Positives = 89/341 (26%), Gaps = 51/341 (14%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T+ E++ G GND + S ++V GND G G DT+ + + I
Sbjct: 3681 TLHGGFDGETLDGGGGNDSLFAGSGDDVITGGPGNDWLRGGFGNDTYSFASGFGQDTISD 3740
Query: 321 --------------------------FENAIIV-YDANEHKQDFLSDV--------ERLR 345
+ + +V A + + + E
Sbjct: 3741 DGRTNNSPTDAVIFGAGLSAADLRVRTDGSDLVLTFAGTEDRLVVENTFNSGNYRLESYV 3800
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
F D + + + LI ++ E G D
Sbjct: 3801 FFDGTTLTHAQVAALAWLADDTDQQLIGDYDGNLLEGGGGNDSLFGGNGDDTL----EGG 3856
Query: 406 GSYDDLRNVFGSDRGAAARHYITH-GVKEGRNPDAFKALEYIASHEDLIN----AFADAP 460
D L+ FG+D + +GR ++ + + L + A
Sbjct: 3857 VGNDYLQGGFGNDVYGFEAGFGRDLIWDDGRTANSPADVVEFGAGLSLADLEVTATPQDL 3916
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFD-----SYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
L G+D R + Y ++DDL A + +
Sbjct: 3917 ILTFAGRDDRLTLSRTVDRLSDRIELVRFADGYELTHDDLL-ALAWVPSDADQTFTGGSS 3975
Query: 516 KEGRN-PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
E + +L + + L + D +
Sbjct: 3976 SETLSGGGGNDSLSGLDGEDTLTGGPGNDVLSGGDRNDVYR 4016
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/246 (16%), Positives = 72/246 (29%), Gaps = 14/246 (5%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ G + D AD G + + G
Sbjct: 7970 LDGTATGGDAAGDVLVGIENLVGTDHADSLTGDDGGNALFGGRGDDALTGGDG---DDLL 8026
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQD-SMMDASFGYCATPMVSDIVAVQKIYGAPK 199
GG + D+ ++ + D + AS G +S I +Q +
Sbjct: 8027 AGGRGADILSGGAGTDTADYTLSLGGISIDLAAGTASGGDAEGDTLSGIEIIQGSF-HDD 8085
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ + + S T+ G D D ++L T G
Sbjct: 8086 SLTGDAA---DNTFRGSRGADTMAGGDGIDTADYA-FADEAVAVNLATGQ-----GTAGE 8136
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ IE +VGS D G++ +++F G+D+ G+ G D + + S I
Sbjct: 8137 AAGDVLSGIERLVGSFHADTFDGSAGDDIFDGRFGDDLLRGAGGSDDYVFGHDSGADTIT 8196
Query: 320 RFENAI 325
A
Sbjct: 8197 EIGAAD 8202
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/229 (15%), Positives = 60/229 (26%), Gaps = 40/229 (17%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + TI ++ G G+D + G A + G+D +G G D + + A
Sbjct: 3529 FGTTASQTITGTNDPGTLTGGWGDDTLDGGHAADTLTGGPGDDSLEGGRGSDLYLFEAGF 3588
Query: 314 YLYKIYRFE--------------------------NAIIVYDANEHKQDFL--------- 338
+I + + D L
Sbjct: 3589 GQDRIRDLGLTSFYSPLDVVEFGEGLALADLRVESTGTSLILTFAGRTDRLVVEETLSHD 3648
Query: 339 -SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
S +E RFAD S S + L + + G D+
Sbjct: 3649 RSRIETYRFADGQELSHAEMLARATAPDESDQTLHGGFDGETLDGGGGNDSLFAGSGDDV 3708
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
D LR FG+D + A + + + + I
Sbjct: 3709 ITGGPG----NDWLRGGFGNDTYSFASGFGQDTISDDGRTNNSPTDAVI 3753
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 73/538 (13%), Positives = 131/538 (24%), Gaps = 90/538 (16%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D G G ++ + LG + G D
Sbjct: 4633 GGDGADVISGLGGDDSLSGGAGNDSLDGGPGADILAPGLG------RDRLEGGPGADTFL 4686
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI--YGAPKGSLGNNIYKIEV 211
D F + + D+ +D T + + V V + Y +
Sbjct: 4687 LEDGFDYVFLEAPLFYDTTIDI---LSLTHLAAADVVVGESPDYYLQIARASGEGRVVLD 4743
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-TVIES 270
+ DDL + + G D IGG ++ T+ +
Sbjct: 4744 YDLQVEVRLSDATWSMDDLWAMADVTGRDGISDFAGSDEPEIGGGTRDDTLYASFYGATT 4803
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI----YRFENAII 326
+ G G D + G ++V +G+D+ DG G DT+ + A + Y + ++
Sbjct: 4804 LSGLEGADQLYGRDNDDVLIGGAGHDLLDGGEGDDTYIFEAAFGHDVLVLSRYDTDLDVV 4863
Query: 327 VYDAN-----------------------------EHKQDFLSDVERLRFADQCIDSV--- 354
V+ D ++ + +RFAD I
Sbjct: 4864 VFGTGIAPADVTVGLAGDNLLLLLDGGAHSIELRPSHGDVVTPLAEVRFADGTIWDGATL 4923
Query: 355 ------------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
L T ++E L G DV G D
Sbjct: 4924 AGMASAAPAPLTGTASDDTLTGTDAWERLSGGDGDDVLSGGSGNDSLFGGNGDDSLTGGG 4983
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
DD G + + + +P A + + A+ + + +
Sbjct: 4984 GDDALSDD----GGGATYLFSAGFGQDTITHRLDPAAPGVIVFDATVSPGDISVSGGGEF 5039
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG--VKEGRN 520
+ + D Y D + A G EG N
Sbjct: 5040 DDITLHFANGADRLTILSWGPDDASYGIDRVDFHDGTSWTAADLAAMAADAGGVSLEGDN 5099
Query: 521 P------------------------DAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
P +L + + L+ D D +
Sbjct: 5100 PPVPEGGAGDDTITGSDGDNRLAGHGGNDSLVGLRGRDTLVGGAGDDTLDGGRDADIY 5157
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/318 (13%), Positives = 78/318 (24%), Gaps = 41/318 (12%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + E++ G +G+D ++G ++ +G D+ +G G DT+ +
Sbjct: 6530 TDGDDVRFGSADGETLAGGAGDDRLVGLGGDDDLAGGAGVDLLEGGEGDDTYRFGPGDGQ 6589
Query: 316 YKIYRFENA-------------IIVYDANEHKQDF------------------LSDVERL 344
+I A + + +E +
Sbjct: 6590 DRIADAGGAADVLALGAGIGPDDVRVSQSSDGSALILHIGTTGERIRIEDALGAGRIETV 6649
Query: 345 RFADQ-------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE--FGLSEGR 395
RF I V + E ++ +G D F +GR
Sbjct: 6650 RFEGGPDWSVADLIARVPSNLDDRIFGDDIGETIVGGLGDDRVSGRGGDDTYLFARGDGR 6709
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
DI D ++ S+ + + + E
Sbjct: 6710 DILRDDANSPADVLEISGYAASEVRFVRLGSQGVDLAIQFEGTDDQIIVASGLSEGAGIE 6769
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF-GSDRGAAARHYITHG 514
D + + D +Y DD G D A +
Sbjct: 6770 TIILTDDATTYSIAGIAALLVDAQASDGDDEVYGTDGDDTLAGGPGDDLLAGGDGDDLYL 6829
Query: 515 VKEGRNPDAFKALEYIAS 532
G D AL AS
Sbjct: 6830 YARGDGDDRIDALGRGAS 6847
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 69/552 (12%), Positives = 131/552 (23%), Gaps = 78/552 (14%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F + + + + + D G + H
Sbjct: 5070 VDFHDGTSWTAADLAAMAADAGGVSLEGDNPPVPEGGAGDDTITGSDGDNRLAGHGGNDS 5129
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ +GL + GG +D + D + S QD + + + + +V D
Sbjct: 5130 L---VGLRGRDTLVGGAGDDTLDGGRDADIYEF---SAGFGQDLITNTGWTSASDEVVFD 5183
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKN 241
A + + ++ + TI + DD + D T
Sbjct: 5184 --ATIDPADLIVEEAADGSGDMVLRIAGTSDRITIEGAADDDHIGAVRFADGTRWDWDAL 5241
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ + ++ + TI + + G +GNDV+ G + + +GND G
Sbjct: 5242 IARMVPAAGETVETSLGDDTILGTADSDLLDGLAGNDVLQGGAGRDTLIGGAGNDDLAGG 5301
Query: 302 ---------SGLDTFFYYAPSYLYKIYRFENAI-----------IVYDANEHKQDFL--- 338
G D + Y + +I V + D +
Sbjct: 5302 TGRDILTDADGDDVYRYALGDGIDRITDLAGFDRLLFGAGIVPSDVTVSGRDGADLVLRL 5361
Query: 339 ----------------SDVERLRFADQCI------------------DSVNVKQRSILEY 364
+E + FAD + ++
Sbjct: 5362 ADGGRIELIGALGDAAQAIEEVAFADGTVWTRADLIGFATAGTDAVQRLHGSDLGDSIDA 5421
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT----FDSYLYLGSYDDLRNVFGSDRG 420
+ + +G D G D L G+ DD SD
Sbjct: 5422 GGGDDSVFGGLGDDSLSGGSGMDRLEGGAGDDTLAAGPGGGTLLGGADDDTYRFAASDGQ 5481
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
E A + S +DL+ + + E
Sbjct: 5482 VIVEDSAGTDRIEMDAGLAPADVSVHPSGDDLVLRVDGTEARLVLRGARADATAEIEQVV 5541
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
+ + L G D + + G L + +
Sbjct: 5542 FADGTVWTPATLRALAAANGGDAQSIESDATGETIDAG---AGDDTLTDLGGDDSFSGGT 5598
Query: 541 ADAPDLVQAGKD 552
D AG D
Sbjct: 5599 GDDSIEGGAGDD 5610
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 51/373 (13%), Positives = 90/373 (24%), Gaps = 32/373 (8%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
D G G T G + G D
Sbjct: 4502 GGAGNDGLYGGPGSDTYKFSLG-------FGQDRLSDGDNGEA-------ARVDRVEFDG 4547
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY-GAPKGSLGNNIYKIEVQQKDSPFIQT 221
D + D++ V +G+ ++ + V ++
Sbjct: 4548 TLSSSDLRVYTDGGMLFLTFAGTDDVLWVFHGGESGEEGAPSDDPFTEVVFSAEARTYTF 4607
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
L G L I G + +++ +S+ G G D++
Sbjct: 4608 AEILVLAAPLPRAEQSGDVADETLAGGDGADVISGLGGDDSLSGGAGNDSLDGGPGADIL 4667
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN---EHKQDF 337
+ G D F G D F AP + + + A+ D+
Sbjct: 4668 APGLGRDRLEGGPGADTFLLEDGFDYVFLEAPLFYDTTIDILSLTHLAAADVVVGESPDY 4727
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASY-EDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ R + + +++ L +DL + + + F E
Sbjct: 4728 YLQIARASGEGRVVLDYDLQVEVRLSDATWSMDDLWAMADVTGRDGISDFAGSDEPEIGG 4787
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
T D LY Y A G + D L A H+ L
Sbjct: 4788 GTRDDTLYASFYG------------ATTLSGLEGADQLYGRDNDDVLIGGAGHDLLDGGE 4835
Query: 457 ADAPDLVQVGKDH 469
D + + H
Sbjct: 4836 GDDTYIFEAAFGH 4848
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 36/271 (13%), Positives = 73/271 (26%), Gaps = 11/271 (4%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ GG + + G+ + ++A +S+ G G D++ G++ ++ G
Sbjct: 6201 IGGGPLADLIFGNGGGDILRGFGGDDSLAGGADDDSLFGGFGADLLSGDAGHDDLKGGGG 6260
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+DV G +G DT F + + + +D D
Sbjct: 6261 DDVLSGGAGDDTLF--GGDDEAEFAGNDVFSGGLGDDTLFGGTGNDTYVFGADDGTDRIT 6318
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ + + A V +DV G L + V
Sbjct: 6319 DAGGDDRISFAA------GVAPEDVSVRQAGHDLVLRVVGGTTRIVLVDALAGGTSIETV 6372
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
D A + G + + L A + G +
Sbjct: 6373 AFDDGTAWTWDDLLDASMLGTDG---DDSLALVDGLTLDGAGGNDSLTGGDGGETLVGGP 6429
Query: 475 CEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
++ +Y + D ++ GA
Sbjct: 6430 GDDVLKGGLGDDVYRFALGDGQDRIEDVAGA 6460
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 68/292 (23%), Gaps = 31/292 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + D G G
Sbjct: 4305 EGGPGDDTINGLATASRMLGEGGNDTLTGGGGNDTLSGQGGSDVYSFAAGFGRDILDDGG 4364
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM------PQDSMMDASFGYCATPMVSDI 188
+ G +G + + D + + + G P I
Sbjct: 4365 ANTGDGSGNHDIVRFDATVAPADVVVEETAGGDLVLRLSATGDRLTIVGGAAVDPATGGI 4424
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
AV G + + + +GG D +T GV +
Sbjct: 4425 DAVHLSDGTIWDHA-------------ALLARAVPPAGGQD---ITAPTGVVDDSLTGAG 4468
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
I G T+A G GND + G ++V +GND G G DT+
Sbjct: 4469 GDDDIRGVGGQDTLA---------GLGGNDDLYGGDGDDVLEGGAGNDGLYGGPGSDTYK 4519
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ ++ +N LS + + D + +
Sbjct: 4520 FSLGFGQDRLSDGDNGEAARVDRVEFDGTLSSSDLRVYTDGGMLFLTFAGTD 4571
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 11/135 (8%)
Query: 223 YDSGGDDLLD----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
D G D + + G + I SI G + + + G +D
Sbjct: 10679 IDFSGFDTVREVAVIDGWFGNDDIIGSRQG--DSIEGGFGRDELRGEGGDDRIDGGWSDD 10736
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G + ++V SGND G + DTF + + + R + I +D L
Sbjct: 10737 ELFGGAGDDVLIGGSGNDELWGGADDDTFVFNRLYDIGRSARRTDEIGDFDRAGDDVLDL 10796
Query: 339 SD-----VERLRFAD 348
++ F+
Sbjct: 10797 RGLGLSYIDEFVFSG 10811
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 74/271 (27%), Gaps = 24/271 (8%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+A + V ND G+ + +V F GND G +G DT+ + I
Sbjct: 1915 MAFNVVDFERAAGDFNDAYYGSGSGDVMFGGLGNDYLSGGAGGDTYIFRIGDGQDVIDDV 1974
Query: 322 ENA---------IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ E +D + RL D + S T L+
Sbjct: 1975 GGFSFGPVQAGLDFLMFRGEITEDTI----RLTRDGASTDVLITILDSAGNETGDSVLLV 2030
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G G EG D + + VF + + +
Sbjct: 2031 NQFGGLRLNLGGFAEAIGTDEGLDF-------VAPNQIEKIVFERGGMLSFSELVDRVL- 2082
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
E D A+ + + L D Q G D + FG GR V D +
Sbjct: 2083 ENARTDGDDAIYGVLNDNTLDGGAGDDYLTGQSGFDTYI-FGRGYGRDVIEDKDFASALF 2141
Query: 493 D--DLRNVFGSDRGAAARHYITHGVKEGRNP 521
D F D ++ G +
Sbjct: 2142 GPKDDLLQFTDDIRWTDLDFLRDGSSDTLTL 2172
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 57/393 (14%), Positives = 101/393 (25%), Gaps = 34/393 (8%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D + D G G T+ + G + G D
Sbjct: 3828 GDYDGNLLEGGGGNDSLFGGNGDDTLEGGVGNDYLQGGFG------NDVYGFEAGFGRDL 3881
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
D T+ + + + T D+ + G + +
Sbjct: 3882 IWDDGRTANSPADVVEFGAGLSLADLEVTATPQDL--ILTFAGRDDRLTLSRTVDRLSDR 3939
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ Y+ DDLL L + + S ++ G N +++ +++ G
Sbjct: 3940 IELVRFADGYELTHDDLLALAWVPSDADQTFTGGSSSETLSGGGGNDSLSGLDGEDTLTG 3999
Query: 274 SSGNDVVIGNSANNV--FFESSGNDVF-----DGSSGLDTFFYYAPSYLYKIYRFENAII 326
GNDV+ G N+V F G D+ SG D + + +
Sbjct: 4000 GPGNDVLSGGDRNDVYRFEVGFGQDIVSDDGWSTRSGADVLSFGPGFSADDLEARADGAD 4059
Query: 327 VYDANEHKQDFLS----------DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + + + ++ VE L F D + + TA + L
Sbjct: 4060 LVVSFSGRDERVTIARALEHSDFIVETLLFDDGTTVAFADLLARVQAGTAGDDLLPGTQA 4119
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + G D + + + A G
Sbjct: 4120 GDSLAGLA---------GDDTLTGNNGDDDLDGGAGDDTLTGGAGADTLTGGAGNDSLTG 4170
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
D L A + L D L G H
Sbjct: 4171 DDGADTLTGGAGDDSLTGGRHDDTYLFAPGFGH 4203
Score = 44.4 bits (103), Expect = 0.056, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 57/194 (29%), Gaps = 41/194 (21%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+WS + + + IA+ +++ G + ++ G+D +G S DT
Sbjct: 2207 GTTWSYLKLLQHYVDIARTDGNDTIYGF--------ETISDRLDGGLGDDRLEGQSAGDT 2258
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDF----------------------------- 337
+ + A ++ A + +D
Sbjct: 2259 YVFAAGYGSDTVFDSAGADKIEFVGLTSEDVEFSRTALDLIMTIKGTSDRIVLENQYVRA 2318
Query: 338 ---LSDVERLRFADQCIDSVNVKQRSI-LEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
VE +F D+ +D + + L TA+ E + ++ + +
Sbjct: 2319 GQQAHAVELFQFTDRSLDYTDFNPEDLDLVGTAAGETITGSNFGELLDGQAGDDTLIGGD 2378
Query: 394 GRDITFDSYLYLGS 407
G DI Y
Sbjct: 2379 GGDIYRFDIGYGQD 2392
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++ G +GND + +V GND+ G SG DT+ + I E
Sbjct: 3123 NLFGRAGNDTLETGRGADVLDGGLGNDLLQGHSGGDTYVFGHGDGQDVIADVE 3175
Score = 38.6 bits (88), Expect = 3.4, Method: Composition-based stats.
Identities = 39/414 (9%), Positives = 84/414 (20%), Gaps = 75/414 (18%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+T + + T + D G ++ +
Sbjct: 10390 VTVTDVVEDG-GPITLTGGAGRDTLVGGDEPNLLEGLGGRDALIGNGGDDSLFGGRGDDD 10448
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS------MMDASFGYCA 181
+ G +GG + G D ++ + +
Sbjct: 10449 LFGGAGDDLLDGGSGGDDLEGGAGDDTFLIRGFEALNDDFDGGDGRDTIRVAGSGLVMLG 10508
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
D+ + L + ++ ++ + G D +
Sbjct: 10509 KFSPDDVEVLD----GNGQVLQMSWLSNKLDLSGFESVENVARIQGWFGNDRITGSQQDD 10564
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---- 297
ID I G + + + + G +G+D + G + +G+D
Sbjct: 10565 VIDGGFGK-DRIAGEGGDDRLFGGWSDDRLEGGAGDDTLDGGRGRDRLEGGAGDDTFLIR 10623
Query: 298 --------FDGSSGLD-------------------------------------------- 305
DG SG D
Sbjct: 10624 GTEAARERIDGGSGFDAIEVVAGSGRLTHDRLVVDDVELFDGNGAEVRGTARGDRIDFSG 10683
Query: 306 ------TFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQ 358
I + + +R+ +
Sbjct: 10684 FDTVREVAVIDGWFGNDDIIGSRQGDSIEGGFGRDELRGEGGDDRIDGGWSDDELFGGAG 10743
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
+L + ++L D F + + + D D DLR
Sbjct: 10744 DDVLIGGSGNDELWGGADDDTFVFNRLYDIGRSARRTDEIGDFDRAGDDVLDLR 10797
Score = 37.5 bits (85), Expect = 7.3, Method: Composition-based stats.
Identities = 44/345 (12%), Positives = 83/345 (24%), Gaps = 35/345 (10%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTFFYYAPS 313
+ + + + G G+D + G+ ++V F G DV + +G D
Sbjct: 2860 GPGDDIVRGSDRDDVIEGRGGDDQLRGDRGDDVYRFTIGDGQDVIEDIAGTDRLELVGYR 2919
Query: 314 YLY----KIYRFENAIIVYDANEHKQDFLSD--VERLRFADQC----------IDSVNVK 357
++ + +I+ A + +E + F+ +++
Sbjct: 2920 PEDVRVERLAADRDDLILTFAGSDDAVIIRGAALESVVFSYGTSWSRDALLDLVNATGSD 2979
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+L T E G D + + G + D
Sbjct: 2980 GDDLLTGTPGSEVYRPGFGNDHVVDGLGDDVYTFARG---DGQDRIESAGGADGFGAVLF 3036
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
G A EG L + + D D
Sbjct: 3037 GAGIALEDVTAKRDAEG-------NLILLIAGGDDRLTLVDPAADPDAIVGTLRFADGRT 3089
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
L DD V G LE + L
Sbjct: 3090 LEVADLARALPATDGDDHVIVPSGAPSDPEPATNLFGRA------GNDTLETGRGADVLD 3143
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNV 582
+ +G D + FG+ +G+ + + + S D
Sbjct: 3144 GGLGNDLLQGHSGGDTYV-FGHGDGQDVIADVEELSASAVDTLRF 3187
Score = 37.1 bits (84), Expect = 9.1, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 47/149 (31%), Gaps = 1/149 (0%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ G D L +T + ++ ++ + A T+ + + I
Sbjct: 6863 VRAGPGSDDLAVTFATTGDRLVLVDALGAANGARGSLTLQFADGTLWDRAAMRARALEDI 6922
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ G+D+ S+G D+ S Y+ + D D + +
Sbjct: 6923 QGDGADNVEGFDGDDIITLSAGDDSASGGEGSDTYRFAAGAGDDRIRDGGTSGTDRIELI 6982
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYED 370
L AD + + ++L A +D
Sbjct: 6983 -GLSAADTSVSRLFRGSETVLLEFAGIDD 7010
Score = 37.1 bits (84), Expect = 9.6, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 21/53 (39%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+VG++ + + G++ + +G+D G G D + + I
Sbjct: 2346 DLVGTAAGETITGSNFGELLDGQAGDDTLIGGDGGDIYRFDIGYGQDVIVDTR 2398
>gi|158337554|ref|YP_001518729.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158307795|gb|ABW29412.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
Length = 909
Score = 98.7 bits (244), Expect = 3e-18, Method: Composition-based stats.
Identities = 71/492 (14%), Positives = 138/492 (28%), Gaps = 23/492 (4%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+D+ +N + R +G + + + G+ +
Sbjct: 325 ADVTLGGTNFDWQSFRWNVDLKQGYDFLLFQVNTRGTKDQGDFVGLDDVRLFGNGISTPT 384
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
P G + +D N+ S + +M D G + ++G
Sbjct: 385 PSPIPSGDNHFFLDGTDANNWMRGSDRNQYMEGRGGNDTLRGAGGNDSLYGGTGNDHLHG 444
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+++Y + +GG+D + TL+G N + G
Sbjct: 445 EVGN---DDLYGGDGNDLLDGGTGDDKFNGGND--NDTLVGQDGNDNLNGGAGLDVLYGG 499
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + T+ +S+ GSSGND + G ++ + G+D +G G DT
Sbjct: 500 DGDDTLNGGAGNDSLWGSSGNDRLYGLEGDDRLDGALGDDNLNGGEGNDTL--AGGEGND 557
Query: 317 KIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+Y + A+ + + + + LR L + + L
Sbjct: 558 TLYGDIGQDRLLGADGNDTLNGAAGDDELRGDGGDDSLYGDVGNDSLYGGSGSDTLSGGN 617
Query: 376 GQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
D +G+D F D L+ G DD + Y G
Sbjct: 618 DADSLMGGNGNDHLNGGDGQDQLFGNSGDDTLFGGRGDDQLLSSWGNDTL----YGALGN 673
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYL 489
+L + + + G D ++ DS+
Sbjct: 674 DTLEGDYGEDSLYGYEGDDLIRGGMGRDRLYGEAGNDALWGGSGDDYLAGGLGNDSHWGE 733
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D + G+D Y G +L ++ L + + + A
Sbjct: 734 DGNDQIWAAAGNDLI-----YGGKGQDSLGGGAGNDSLHGGDGNDLLSSQDGNDWLMGDA 788
Query: 550 GKDHFSNFGYEE 561
G D G +
Sbjct: 789 GNDTLRGEGGND 800
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/434 (12%), Positives = 108/434 (24%), Gaps = 22/434 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
SD G T R D +G + + + G
Sbjct: 408 GSDRNQYMEGRGGNDTLRGAGGNDSLYGGTGNDHLHGEVGNDDLYGGDGNDLLDGGTGDD 467
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
N + G D + + + Y D ++ G + + ++Y
Sbjct: 468 KFNGGNDNDTLVGQDGNDNLNGGAGLDVLYGGDGDDTLNGGAGNDS---LWGSSGNDRLY 524
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESW 250
G + + T+ G+D L + G N
Sbjct: 525 GLEGDDRLDGALG-DDNLNGGEGNDTLAGGEGNDTLYGDIGQDRLLGADGNDTLNGAAGD 583
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + ++ +S+ G SG+D + G + + +GND +G G D F
Sbjct: 584 DELRGDGGDDSLYGDVGNDSLYGGSGSDTLSGGNDADSLMGGNGNDHLNGGDGQDQLF-- 641
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRSI-------- 361
S ++ + + + + + + L + +
Sbjct: 642 GNSGDDTLFGGRGDDQLLSSWGNDTLYGALGNDTLEGDYGEDSLYGYEGDDLIRGGMGRD 701
Query: 362 -LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
L A + L G D +G D + + Y
Sbjct: 702 RLYGEAGNDALWGGSGDDYLAGGLGNDSHWGEDGNDQIWAAAGNDLIYGGKGQDSLGGGA 761
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ G + D L A ++ L + G D G
Sbjct: 762 GNDSLHGGDGNDLLSSQDGNDWLMGDAGNDTLRGEGGNDTLTGGRGND-SVEGGHGNDLL 820
Query: 481 VTFDSYLYLGSYDD 494
+ D+ +
Sbjct: 821 MGVDATQTQAGRGE 834
Score = 85.2 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/394 (11%), Positives = 101/394 (25%), Gaps = 24/394 (6%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ D + + S + D +G + +
Sbjct: 494 DVLYGGDGDDTLNGGAGNDSLWGSSGNDRLYGLEGDDRLDGALGDDNLNGGEGNDTLAGG 553
Query: 132 ---------LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
+G +G + G D E Y + + G
Sbjct: 554 EGNDTLYGDIGQDRLLGADGNDTLNGAAGDDELRGDGGDDSLYGDVGNDSLYGGSGSDTL 613
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+D ++ G + G+ + Q + T++ GDD L + N
Sbjct: 614 SGGNDADSLMGGNGNDHLNGGD----GQDQLFGNSGDDTLFGGRGDDQL----LSSWGND 665
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
++ G ++ + + + G G D + G + N+ + SG+D G
Sbjct: 666 TLYGALGNDTLEGDYGEDSLYGYEGDDLIRGGMGRDRLYGEAGNDALWGGSGDDYLAGGL 725
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G D+ ++ +I+ ++Y + + + L D +
Sbjct: 726 GNDS--HWGEDGNDQIWAAAGNDLIYGGKGQDSLGGGAGNDSLHGGDGNDLLSSQDGNDW 783
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD----DLRNVFGS 417
L A + L G D + G D+ D+ +
Sbjct: 784 LMGDAGNDTLRGEGGNDTLTGGRGNDSVEGGHGNDLLMGVDATQTQAGRGEQDILTAWTG 843
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+G+N ++
Sbjct: 844 INTFVLGDASQAFYNDGQNNTLGAEDYALSKDSS 877
>gi|396666|emb|CAA68613.1| unnamed protein product [Bordetella pertussis 18323]
Length = 1706
Score = 98.7 bits (244), Expect = 3e-18, Method: Composition-based stats.
Identities = 60/483 (12%), Positives = 123/483 (25%), Gaps = 45/483 (9%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D+ + G TI + LGL +G D
Sbjct: 1138 GSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 1197
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + +LG + Y
Sbjct: 1198 SDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYY------ 1251
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ ++ + + D+L G + + ++ G + + + + + G
Sbjct: 1252 DNVRNVENVIGTSMKDVLI----GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYG 1307
Query: 274 SSGNDVVIGNSANNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GND + G ++ +GND V G G+DT Y I
Sbjct: 1308 DAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGR 1367
Query: 323 NAIIVY------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + +A D +S +E + + Q ++L +
Sbjct: 1368 IGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 1427
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L G DV + GRD + + D N + + G
Sbjct: 1428 LAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANA---------GNLLDGG 1478
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+ A + + + + + + E + + +
Sbjct: 1479 DGRDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLI- 1537
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
D + G + L A ++DL D L G
Sbjct: 1538 --GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGVG 1595
Query: 551 KDH 553
H
Sbjct: 1596 YGH 1598
Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 53/371 (14%), Positives = 100/371 (26%), Gaps = 32/371 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ T D D+ G G + + LG G
Sbjct: 1271 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLG-DDTLEGGAGN 1329
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+G E+D V+ D++ Y T + I A + G
Sbjct: 1330 DWFGQTQAREHD-----VLRGGDGVDTVD-----YSQTGAHAGIAAGRIGLGILADLGAG 1379
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ K+ + + ++ L + G + + + G E + +
Sbjct: 1380 RVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVLLG 1439
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------YLY 316
+ + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 1440 GDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFSGPGRGLDAGAKG 1499
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ L ++E + + + ++L A + L G
Sbjct: 1500 VFLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAG 1559
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
DV + G D DL G D Y + E
Sbjct: 1560 DDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGVGYGHDTIYESGG 1606
Query: 437 PDAFKALEYIA 447
+ A
Sbjct: 1607 GHDTIRINAGA 1617
Score = 81.0 bits (198), Expect = 5e-13, Method: Composition-based stats.
Identities = 56/417 (13%), Positives = 97/417 (23%), Gaps = 64/417 (15%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N +I + + G SG+D + G + N+ G + G +G D F
Sbjct: 1013 IIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLG 1072
Query: 313 SYLYKIYRFENAIIVYDA--------------------------------NEHKQDFLSD 340
+ ++ V N D + +
Sbjct: 1073 VWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKN 1132
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+E L + Q + L + + G D+ +G DI
Sbjct: 1133 IENLHGSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQ 1192
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
DD+ G D + + + +A
Sbjct: 1193 DDE--TVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDY 1250
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
++ ++ + +G D G G
Sbjct: 1251 YDNVRNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGD------------GDDLLFG 1298
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLW 580
D L A ++ L D AG D F E +
Sbjct: 1299 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLR-------------- 1344
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKV 637
G D Y G G A G G+ + + + S ++D
Sbjct: 1345 ---GGDGVD-TVDYSQTGAHAGIAAGRIGLGILADLGAGRVDKLGEAGSSAYDTVSG 1397
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/365 (11%), Positives = 73/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N IA + G GND + G +++ G D G G D F
Sbjct: 1135 NLHGSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 1194
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 1195 ETVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYYDNV 1254
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+VE + Q + + + L G D+
Sbjct: 1255 RNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 1314
Query: 390 GLSEGRDITFDSYL------YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 1315 YGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGRIGLGILA 1374
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 1375 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 1432
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 1433 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRD 1482
Query: 564 SITFN 568
++ F+
Sbjct: 1483 TVDFS 1487
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 52/341 (15%), Positives = 92/341 (26%), Gaps = 63/341 (18%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS-HNALHEIGHA-- 131
+ + +F + + DV R G G T+ H G A
Sbjct: 1308 DAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHA-GIAAG 1366
Query: 132 -LGLMHPGSYNGGYPV-YGVDNDYENDSFLTSVMSYFMP--QDSMMDASFGYCATPMVSD 187
+GL G G D+ DA +D
Sbjct: 1367 RIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGAD 1426
Query: 188 IVA----------------------VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
++A ++YG G++ + + +
Sbjct: 1427 VLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGE----AGDD-WFFQDAANAGNLLD---GG 1478
Query: 226 GGDDLLDLTLIGGV------KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
G D +D + G ++ L S + E + + IE+ VGS+ +DV
Sbjct: 1479 DGRDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRN---IENAVGSARDDV 1535
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+IG++ NV +GNDV G +G D + ++
Sbjct: 1536 LIGDAGANVLNGLAGNDVLSGGAGDD--VLLGDEGSDLLSGDAGNDDLFGGQGDDTYLF- 1592
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
V +I E ++ + G D
Sbjct: 1593 -------------GVGYGHDTIYESGGGHDTIRINAGADQL 1620
Score = 42.9 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 47/177 (26%), Gaps = 29/177 (16%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVF-DGSSGL-DTFFYYAPSYLYKIYRFENAIIV 327
V+G G+DVV+ N++ + +G + + G D+ A + + + N V
Sbjct: 910 DVIGGDGDDVVLANASRIHYDGGAGTNTVSYAALGRQDSITVSADGERFNVRKQLNNANV 969
Query: 328 Y---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y + D L V+ + +
Sbjct: 970 YREGVATQTTAYGKRTENVQYRHVELARVGQVVEVDTLEHVQHIIGGAGNDSITGNAHDN 1029
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L + + L G D + G D+ + D +
Sbjct: 1030 FLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVWSNQLDGGAGVDT 1086
>gi|33591934|ref|NP_879578.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
pertussis Tohama I]
gi|34978355|sp|P15318|CYAA_BORPE RecName: Full=Bifunctional hemolysin/adenylate cyclase; AltName:
Full=AC-HLY; AltName: Full=ACT; AltName: Full=Cyclolysin;
Contains: RecName: Full=Calmodulin-sensitive adenylate
cyclase; AltName: Full=ATP pyrophosphate-lyase; AltName:
Full=Adenylyl cyclase; Contains: RecName: Full=Hemolysin;
Flags: Precursor
gi|33571578|emb|CAE41066.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
pertussis Tohama I]
gi|66820294|gb|AAY57201.1| adenylate cyclase toxin [Bordetella hinzii LMG 13501]
gi|71979945|gb|AAZ57194.1| adenylate cyclase toxin [Bordetella hinzii BC-306]
gi|332381351|gb|AEE66198.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
pertussis CS]
Length = 1706
Score = 98.7 bits (244), Expect = 3e-18, Method: Composition-based stats.
Identities = 60/483 (12%), Positives = 123/483 (25%), Gaps = 45/483 (9%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D+ + G TI + LGL +G D
Sbjct: 1138 GSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 1197
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + +LG + Y
Sbjct: 1198 SDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYY------ 1251
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ ++ + + D+L G + + ++ G + + + + + G
Sbjct: 1252 DNVRNVENVIGTSMKDVLI----GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYG 1307
Query: 274 SSGNDVVIGNSANNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GND + G ++ +GND V G G+DT Y I
Sbjct: 1308 DAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGR 1367
Query: 323 NAIIVY------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + +A D +S +E + + Q ++L +
Sbjct: 1368 IGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 1427
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L G DV + GRD + + D N + + G
Sbjct: 1428 LAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANA---------GNLLDGG 1478
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+ A + + + + + + E + + +
Sbjct: 1479 DGRDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLI- 1537
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
D + G + L A ++DL D L G
Sbjct: 1538 --GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGVG 1595
Query: 551 KDH 553
H
Sbjct: 1596 YGH 1598
Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 53/371 (14%), Positives = 100/371 (26%), Gaps = 32/371 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ T D D+ G G + + LG G
Sbjct: 1271 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLG-DDTLEGGAGN 1329
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+G E+D V+ D++ Y T + I A + G
Sbjct: 1330 DWFGQTQAREHD-----VLRGGDGVDTVD-----YSQTGAHAGIAAGRIGLGILADLGAG 1379
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ K+ + + ++ L + G + + + G E + +
Sbjct: 1380 RVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVLLG 1439
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------YLY 316
+ + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 1440 GDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFSGPGRGLDAGAKG 1499
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ L ++E + + + ++L A + L G
Sbjct: 1500 VFLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAG 1559
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
DV + G D DL G D Y + E
Sbjct: 1560 DDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGVGYGHDTIYESGG 1606
Query: 437 PDAFKALEYIA 447
+ A
Sbjct: 1607 GHDTIRINAGA 1617
Score = 81.0 bits (198), Expect = 5e-13, Method: Composition-based stats.
Identities = 56/417 (13%), Positives = 97/417 (23%), Gaps = 64/417 (15%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N +I + + G SG+D + G + N+ G + G +G D F
Sbjct: 1013 IIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLG 1072
Query: 313 SYLYKIYRFENAIIVYDA--------------------------------NEHKQDFLSD 340
+ ++ V N D + +
Sbjct: 1073 VWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKN 1132
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+E L + Q + L + + G D+ +G DI
Sbjct: 1133 IENLHGSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQ 1192
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
DD+ G D + + + +A
Sbjct: 1193 DDE--TVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDY 1250
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
++ ++ + +G D G G
Sbjct: 1251 YDNVRNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGD------------GDDLLFG 1298
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLW 580
D L A ++ L D AG D F E +
Sbjct: 1299 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLR-------------- 1344
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKV 637
G D Y G G A G G+ + + + S ++D
Sbjct: 1345 ---GGDGVD-TVDYSQTGAHAGIAAGRIGLGILADLGAGRVDKLGEAGSSAYDTVSG 1397
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/365 (11%), Positives = 73/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N IA + G GND + G +++ G D G G D F
Sbjct: 1135 NLHGSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 1194
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 1195 ETVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYYDNV 1254
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+VE + Q + + + L G D+
Sbjct: 1255 RNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 1314
Query: 390 GLSEGRDITFDSYL------YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 1315 YGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGRIGLGILA 1374
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 1375 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 1432
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 1433 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRD 1482
Query: 564 SITFN 568
++ F+
Sbjct: 1483 TVDFS 1487
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 52/341 (15%), Positives = 92/341 (26%), Gaps = 63/341 (18%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS-HNALHEIGHA-- 131
+ + +F + + DV R G G T+ H G A
Sbjct: 1308 DAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHA-GIAAG 1366
Query: 132 -LGLMHPGSYNGGYPV-YGVDNDYENDSFLTSVMSYFMP--QDSMMDASFGYCATPMVSD 187
+GL G G D+ DA +D
Sbjct: 1367 RIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGAD 1426
Query: 188 IVA----------------------VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
++A ++YG G++ + + +
Sbjct: 1427 VLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGE----AGDD-WFFQDAANAGNLLD---GG 1478
Query: 226 GGDDLLDLTLIGGV------KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
G D +D + G ++ L S + E + + IE+ VGS+ +DV
Sbjct: 1479 DGRDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRN---IENAVGSARDDV 1535
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+IG++ NV +GNDV G +G D + ++
Sbjct: 1536 LIGDAGANVLNGLAGNDVLSGGAGDD--VLLGDEGSDLLSGDAGNDDLFGGQGDDTYLF- 1592
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
V +I E ++ + G D
Sbjct: 1593 -------------GVGYGHDTIYESGGGHDTIRINAGADQL 1620
Score = 42.5 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 47/177 (26%), Gaps = 29/177 (16%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVF-DGSSGL-DTFFYYAPSYLYKIYRFENAIIV 327
V+G G+DVV+ N++ + +G + + G D+ A + + + N V
Sbjct: 910 DVIGGDGDDVVLANASRIHYDGGAGTNTVSYAALGRQDSITVSADGERFNVRKQLNNANV 969
Query: 328 Y---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y + D L V+ + +
Sbjct: 970 YREGVATQTTAYGKRTENVQYRHVELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDN 1029
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L + + L G D + G D+ + D +
Sbjct: 1030 FLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVWSNQLDGGAGVDT 1086
>gi|170742132|ref|YP_001770787.1| hypothetical protein M446_3988 [Methylobacterium sp. 4-46]
gi|168196406|gb|ACA18353.1| hypothetical protein M446_3988 [Methylobacterium sp. 4-46]
Length = 521
Score = 98.3 bits (243), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 60/195 (30%), Gaps = 30/195 (15%)
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG-- 478
+ R + + + F A Y + H+ G EG
Sbjct: 9 SVVRAFRSADARSLIESGLFDAAWYRKRYPAARRGL----------VSHYLASGAAEGHW 58
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 537
FD Y +Y + D Y+ G+ R P+ F Y+ + D+
Sbjct: 59 PNPLFDPVWYATAYPEAVA----DGTLPILSYLRDGLATDRRPNPVFDTRWYLERYPDVR 114
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYI 595
D H+ G E+GR S F+ YL D+ N HY+
Sbjct: 115 -------DYRFHPLVHYLRHGVEDGRDPSPDFSTLWYLEQNPDVRNA----GEHPLVHYL 163
Query: 596 THGMKEGRALGISGM 610
GM EGRA +
Sbjct: 164 HFGMHEGRAPRPASP 178
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 55/208 (26%), Gaps = 37/208 (17%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQ--------VIGQDVFESMKHFYEFGLSEGRDI- 397
AD + ++ + + + F + H+ G+ +GRD
Sbjct: 77 ADGTLPILSYLRDGLATDRRPNPVFDTRWYLERYPDVRDYRFHPLVHYLRHGVEDGRDPS 136
Query: 398 -TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL---- 452
F + YL D+RN HY+ G+ EGR P + A H
Sbjct: 137 PDFSTLWYLEQNPDVRNA----GEHPLVHYLHFGMHEGRAPRPASPGDRAAVHRTEPLTR 192
Query: 453 -------INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD------LRNVF 499
A P R D+ +Y D + +
Sbjct: 193 LEAMVRRAQAGETEPADRADPVFRSLAEAVAAIRLRDPDARFVDATYPDHVLPGLVPDAV 252
Query: 500 GSDRGAAAR------HYITHGVKEGRNP 521
+ A Y + GR P
Sbjct: 253 LAGPAALLAQEGPLGFYAAFRQQGGRQP 280
>gi|158337389|ref|YP_001518564.1| type I secretion target repeat-containing protein [Acaryochloris
marina MBIC11017]
gi|158307630|gb|ABW29247.1| type I secretion target repeat protein [Acaryochloris marina
MBIC11017]
Length = 580
Score = 97.9 bits (242), Expect = 4e-18, Method: Composition-based stats.
Identities = 77/473 (16%), Positives = 136/473 (28%), Gaps = 66/473 (13%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITEL-NPNAQEVARWALGEWSKVVDLTFEETSIHSD 78
+ I Y SF + L N A+ + R ALG W+K L F+E +
Sbjct: 137 GGSGNAVNITYSF------APSFQLNGLSNNEARSLFREALGVWAKYAPLNFQEVQDPGN 190
Query: 79 ---------IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
+FI +G + + + +D + W G+ A+HE G
Sbjct: 191 GSDVDIRVGAEFIDGRSGTLAFAFFPRG--GDQTYDTGETWNAGL-----FLETAVHETG 243
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
H+LGL H +S + ++M+ S A + DI
Sbjct: 244 HSLGLGH-------------------ESGVDAIMN----PSIQRRFSGAGTAFLLQDDIN 280
Query: 190 AVQKIYGAPKGSLGN-----------------NIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
V +YG+ GS+ T +
Sbjct: 281 GVHSLYGSGTGSVSPLSPSPTPVPAPAPAPAPAPAPAPAPAPVPTPTPTPTPTPTPTPTP 340
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
T + I G +N + + + + G GND++ G N+ F
Sbjct: 341 TPSPSPTPTPSPSPTPGDNRIDGTNRNDVLRGGSRNDVIRGFGGNDLISGRRGNDRLFGG 400
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCI 351
SGND G SG D ++ ++ + + + D S + L
Sbjct: 401 SGNDRMFGGSGND--VMSGDGGSDRMSGGSGNDRMFGGSGNDRIDGNSGNDVLNGGSGND 458
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
R L + V D + F L + + + + +Y +
Sbjct: 459 SLFGGNGRDRLIGVNISDAKPGVGEIDFLRGGRDADVFVLGDSQKVYYADGPATSNYAVV 518
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
++ + + G + + AL Y + A
Sbjct: 519 QDFTPNQGDVLQLNGSASDYSLGVSQPSGTALIYEGGSSREVIAIIQGATNFS 571
Score = 37.8 bits (86), Expect = 6.1, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 33/124 (26%), Gaps = 9/124 (7%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ +L + + + G D+ + G D F GS
Sbjct: 357 GDNRIDGTNRNDVLRGGSRNDVIRGFGGNDLISGRRGNDRLFGGSGNDRMFG-----GSG 411
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
+D+ + G + R G ++ + ++ L + G+D
Sbjct: 412 NDVMSGDGG----SDRMSGGSGNDRMFGGSGNDRIDGNSGNDVLNGGSGNDSLFGGNGRD 467
Query: 469 HFSN 472
Sbjct: 468 RLIG 471
>gi|85705843|ref|ZP_01036939.1| hypothetical protein ROS217_08600 [Roseovarius sp. 217]
gi|85669431|gb|EAQ24296.1| hypothetical protein ROS217_08600 [Roseovarius sp. 217]
Length = 631
Score = 97.9 bits (242), Expect = 5e-18, Method: Composition-based stats.
Identities = 66/494 (13%), Positives = 122/494 (24%), Gaps = 81/494 (16%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIHSDIK--------------FISSNNGYVCTPRY-DS 96
+ R A EWS ++ F + + G+ P + +
Sbjct: 77 EAELRAAFAEWSIYGNIEFLQVRDPGGAAGDISTPDIRIFFAPIPGNTLGFAFFPPFLEY 136
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+I D + + A+HEIGHALGL H + N D D
Sbjct: 137 AIAGDILLDVDSSLNFDVPL---FRGLAVHEIGHALGLEHIETVNAIMNPILTQPDILAD 193
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN-----------N 205
Y + + + A I+ ++ +LGN N
Sbjct: 194 DIQGIRQIYGAQDSAPVV--YTLPADLESVTILHNPEVLTVNGNALGNLIIGTGADETIN 251
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI--- 262
+ + + G D +L + + + + + I
Sbjct: 252 GLGGDDTLEGGAGNDQLNGGAGTDWANLDGVTRAAATVSMIAGGLRVVSALGTDELIQME 311
Query: 263 --------------------------AQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ + + G+ +D ++G +++ GND
Sbjct: 312 WVTFADEVVGISALIEEINGPLGQYLTGGGLADRLNGTDDSDTLMGLGGDDILAGGLGND 371
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----------DVERLRF 346
DG SG D+ A + + V+ +
Sbjct: 372 SLDGGSGNDSI--SASDGNDVVVGGFGHDQIGGGPGDDVIDGGDGNDVIGAGLGVDLVSG 429
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L+ A + + G D+ + G GRD
Sbjct: 430 GNGNDVVAGGAGDDTLDGGAGDDSMSGSFGNDLMFGADGTDDLGGGAGRDTI----DAGA 485
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
D + G D G L+ A ++ + + G
Sbjct: 486 GNDRVGGGEGDDSIQ-----GGDGHDFLAGGGRDDILDGGAGNDTINGGVGNDLMTGGSG 540
Query: 467 KDHFSNFGCEEGRF 480
D F G
Sbjct: 541 ADQFVFSAFNPGDA 554
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 45/137 (32%), Gaps = 9/137 (6%)
Query: 214 KDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ GDD LD ++ G N + + +GG TI
Sbjct: 428 SGGNGNDVVAGGAGDDTLDGGAGDDSMSGSFGNDLMFGADGTDDLGGGAGRDTIDAGAGN 487
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ V G G+D + G ++ +D+ DG +G DT + A
Sbjct: 488 DRVGGGEGDDSIQGGDGHDFLAGGGRDDILDGGAGNDTI--NGGVGNDLMTGGSGADQFV 545
Query: 329 DA--NEHKQDFLSDVER 343
+ N D ++D E
Sbjct: 546 FSAFNPGDADVITDFED 562
Score = 53.3 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 56/247 (22%), Gaps = 53/247 (21%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + + D G G I + IG LG+
Sbjct: 366 GGLGNDSLDGGSGNDSISASDGNDVVVGGFGHDQIGGGPGDDVIDGGDGNDVIGAGLGVD 425
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
NG V G D D
Sbjct: 426 LVSGGNGNDVVAGGAGDDTLDGGAGDDSMSGS---------------------------- 457
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ + G D +D +GG
Sbjct: 458 ------------FGNDLMFGADGTDDLGGGAGRDTIDA-------------GAGNDRVGG 492
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + +I + + G +D++ G + N+ GND+ G SG D F + A +
Sbjct: 493 GEGDDSIQGGDGHDFLAGGGRDDILDGGAGNDTINGGVGNDLMTGGSGADQFVFSAFNPG 552
Query: 316 YKIYRFE 322
+
Sbjct: 553 DADVITD 559
>gi|33599313|ref|NP_886873.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
bronchiseptica RB50]
gi|33575359|emb|CAE30822.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
bronchiseptica RB50]
Length = 1740
Score = 97.5 bits (241), Expect = 6e-18, Method: Composition-based stats.
Identities = 72/497 (14%), Positives = 121/497 (24%), Gaps = 73/497 (14%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S D+ + G TI + LGL +G D
Sbjct: 1172 GSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 1231
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + Y A IVA + Y ++
Sbjct: 1232 SDDI-----------DGGAGLDTVDYSAMIHAGKIVAPHE-------------YGFGIEA 1267
Query: 214 KDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
S G D D G + + +++ G + T+
Sbjct: 1268 DLSEGWVRKAARRGMDYYDSVRSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGD 1327
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G GND++ G++ N+ + G+D +G +G D F + V
Sbjct: 1328 DLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVD 1387
Query: 329 --------------------------------DANEHKQDFLSDVERLRFADQCIDSVNV 356
+A D +S +E + +
Sbjct: 1388 YSQAGAHAGVATGRIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGD 1447
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
Q ++L + L G DV + GRD + + D N G
Sbjct: 1448 AQANVLRGAGGADVLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANA-G 1506
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ + GR DA +++ + A H N
Sbjct: 1507 NLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLGKG--FASLMDEPETSNVLRHIENAVGS 1564
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
V D + G + L A ++DL
Sbjct: 1565 VRDDVLI---------GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDL 1615
Query: 537 INAFADAPDLVQAGKDH 553
D L AG H
Sbjct: 1616 FGGQGDDTYLFGAGYGH 1632
Score = 84.5 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 93/374 (24%), Gaps = 38/374 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYN 141
+ T D D+ G G + + LG L +
Sbjct: 1305 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGND 1364
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++D + Y A+ +++D+ A + GS
Sbjct: 1365 WFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLG-ILADLGAGRVDKLGEAGS 1423
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + I G + + + G E +
Sbjct: 1424 SAYDTVSGIENVVGTELADRI-------------TGDAQANVLRGAGGADVLAGGEGDDV 1470
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------ 313
+ + + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 1471 LLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAG 1530
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ L +E + + + ++L A + L
Sbjct: 1531 AKGVFLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSG 1590
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G DV + G D DL G D Y + E
Sbjct: 1591 GAGDDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGAGYGHDTIYE 1637
Query: 434 GRNPDAFKALEYIA 447
+ A
Sbjct: 1638 SGGGHDTIRINAGA 1651
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/365 (11%), Positives = 73/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 1169 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 1228
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 1229 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMDYYDSV 1288
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
VE + Q + + + L G D+
Sbjct: 1289 RSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 1348
Query: 390 GLSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 1349 YGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLGILA 1408
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 1409 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 1466
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 1467 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGND 1516
Query: 564 SITFN 568
++ F+
Sbjct: 1517 TVDFS 1521
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/382 (14%), Positives = 102/382 (26%), Gaps = 63/382 (16%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA--- 131
+ + +F + + DV R G G T+ A G A
Sbjct: 1342 DAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGR 1401
Query: 132 LGLMHPGSYNGGYPV-YGVDNDYENDSFLTSVMSYFMP--QDSMMDASFGYCATPMVSDI 188
+GL G G D+ DA +D+
Sbjct: 1402 IGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 1461
Query: 189 VA----------------------VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
+A ++YG G++ + + +
Sbjct: 1462 LAGGEGDDVLLGGDGDDQLSGDAGRDRLYGE----AGDD-WFFQDAANAGNLLD---GGD 1513
Query: 227 GDDLLDLTLIGGV------KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
G+D +D + G ++ L S + E + + IE+ VGS +DV+
Sbjct: 1514 GNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRH---IENAVGSVRDDVL 1570
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
IG++ NV +GNDV G +G D + ++
Sbjct: 1571 IGDAGANVLNGLAGNDVLSGGAGDD--VLLGDEGSDLLSGDAGNDDLFGGQGDDTYLF-- 1626
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGRDITF 399
+I E ++ + G D + + G D
Sbjct: 1627 ------------GAGYGHDTIYESGGGHDTIRINAGADQLWFARQGNDLEIRILGTDDAL 1674
Query: 400 DS-YLYLGSYDDLRNVFGSDRG 420
Y + + + +++
Sbjct: 1675 TVHDWYRDADHRVEAIHAANQA 1696
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 47/176 (26%), Gaps = 29/176 (16%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVF-DGSSGL-DTFFYYAPSYLYKIYRFENAIIVY 328
V+G G+DVV+ N++ + +G + + G D+ A + + + N VY
Sbjct: 945 VIGGDGDDVVLANASRIHYDGGAGTNTVSYAALGRQDSITVSADGERFNVRKQLNNANVY 1004
Query: 329 ---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ D L V+ + +
Sbjct: 1005 REGVATQKTAYGKRTENVQYRHVELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDNF 1064
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L A + L G D + G D+ + D +
Sbjct: 1065 LAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDGGAGVDT 1120
>gi|317970592|ref|ZP_07971982.1| VBCS repeat-containing protein [Synechococcus sp. CB0205]
Length = 289
Score = 97.5 bits (241), Expect = 6e-18, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 75/217 (34%), Gaps = 43/217 (19%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIY-----------GAPKGSLGNNIYKIEVQQK------ 214
D + TP D +A+ IY G + G+ Y
Sbjct: 16 DTDGVWLLNLTPRTLDFLALDSIYAKQTDSEGRPFGTSRAFNGDTRYGFGSTISEEESVV 75
Query: 215 --------DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-------TESWSSIGGYEKN 259
+ TI D G D LD + + IDL +S I G N
Sbjct: 76 YAGLNELYNYRVALTIADGSGIDTLDFSGYTKS-SLIDLYVMTGDEYKTRFSQINGSLNN 134
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLDTFFYY 310
+++A TVIE+ +G G+D++ N NNV + GN DV G +G+D
Sbjct: 135 LSLAVGTVIENAIGGYGDDILKDNQFNNVLIGNDGNDRFEVSSGYDVITGGAGVDRVMVA 194
Query: 311 APSYLYKIYRFENAIIVY-DANEHKQDFLSDVERLRF 346
+ Y I + V + Q L +E + F
Sbjct: 195 GEAGDYLIGSIDPVTTVLRTRDGASQLVLKGIEFIEF 231
>gi|254502794|ref|ZP_05114945.1| hypothetical protein SADFL11_2833 [Labrenzia alexandrii DFL-11]
gi|222438865|gb|EEE45544.1| hypothetical protein SADFL11_2833 [Labrenzia alexandrii DFL-11]
Length = 1376
Score = 97.5 bits (241), Expect = 6e-18, Method: Composition-based stats.
Identities = 79/365 (21%), Positives = 124/365 (33%), Gaps = 42/365 (11%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGG--VKNYIDL-NT 247
+ +Y + + F + GD LD +N L N+
Sbjct: 1024 EYLYSGTSATAAWTVSGATGFYAPIFFAEDGAPYFIGDSTLDGAGQIRILGENTFGLENS 1083
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S ++ IA T ++GND+V G+S ++V S+ N +G LDT
Sbjct: 1084 SGTSGSDADYADLVIAFDTG----RSATGNDLVAGSSNDDVLLGSTDNYALNGGKKLDTV 1139
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA---------------DQCID 352
Y + + + V D D L VE + F D
Sbjct: 1140 VYDRTKDEVGLSGTRSGVTVTDG--DGADTLVAVELVVFTGANGTGQDRVLVINPDSSTS 1197
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYL-GSYD 409
+ + T + V H+ G SE R D+ FD+ YL + D
Sbjct: 1198 TGTYGFNEAVYLTTHADVAAAVAAGAFSSGADHYALHGKSEDRTADLLFDAEFYLADNAD 1257
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKD 468
V +A++HY G E R+ + F A Y+A + D+ A AD +
Sbjct: 1258 VAAAVAAGVFASASKHYELFGSSENRSVNPLFDAEYYLAQNTDVAQAIADG--MFVSAYQ 1315
Query: 469 HFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG---RNPDA 523
HF N G +EGR + FD+ +Y A H++ G+ +G
Sbjct: 1316 HFLNHGDQEGRAASIYFDTAVYRNEQG------LDSGTNALEHFLLIGLPQGITAPTAAD 1369
Query: 524 FKALE 528
F A
Sbjct: 1370 FNASG 1374
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 63/328 (19%), Positives = 104/328 (31%), Gaps = 20/328 (6%)
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLY--KIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ D+ DG + Y S + E + L A
Sbjct: 1012 GAKAKDLVDGGF---EYLYSGTSATAAWTVSGATGFYAPIFFAEDGAPYFIGDSTLDGAG 1068
Query: 349 QCIDSVNVKQ---RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-DSYLY 404
Q S + + VI D S S D+ + Y
Sbjct: 1069 QIRILGENTFGLENSSGTSGSDADYADLVIAFDTGRSATGNDLVAGSSNDDVLLGSTDNY 1128
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
+ + DR G + G + + + E ++ A+ +
Sbjct: 1129 ALNGGKKLDTVVYDRTK--DEVGLSGTRSGVTVTDGDGADTLVAVELVVFTGANGTGQDR 1186
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA 523
V + + F+ +YL ++ D+ + + A HY HG E R D
Sbjct: 1187 VLVINPDS--STSTGTYGFNEAVYLTTHADVAAAVAAGAFSSGADHYALHGKSEDRTADL 1244
Query: 524 -FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F A Y+A + D+ A A + H+ FG E RS+ F+ + YL D+
Sbjct: 1245 LFDAEFYLADNADVAAAVAAGVFASAS--KHYELFGSSENRSVNPLFDAEYYLAQNTDVA 1302
Query: 581 NVFGSD-RSAAAQHYITHGMKEGRALGI 607
+A QH++ HG +EGRA I
Sbjct: 1303 QAIADGMFVSAYQHFLNHGDQEGRAASI 1330
>gi|220926123|ref|YP_002501425.1| family 2 glycosyl transferase [Methylobacterium nodulans ORS 2060]
gi|219950730|gb|ACL61122.1| glycosyl transferase family 2 [Methylobacterium nodulans ORS 2060]
Length = 872
Score = 97.2 bits (240), Expect = 7e-18, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 80/235 (34%), Gaps = 27/235 (11%)
Query: 376 GQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G ++++HF+ G FD Y + Y++
Sbjct: 28 GLGEVDAVEHFFSVGQYRNFTFNPFFDPLWYAH-----TSGQSGTTVELFESYLSRTNDI 82
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+P Y+ +H L + + + + FD Y+
Sbjct: 83 LESPHPLFDGSYLTAH--LGDEVQENLLVYFMRYAGSMPHCVPVSPTPFFDYRHYIQLNP 140
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKD 552
D+ HY+ +G KE R+P+ F + Y+ ++ D+ +A P +
Sbjct: 141 DVAEAG----VHPLLHYLKYGWKEYRDPNPYFHSEWYLKAYSDVAHAN-INPLV------ 189
Query: 553 HFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
H+ G EGR F+ YL D+ + HYIT+G +EGR+
Sbjct: 190 HYVMSGIHEGRQPHYLFDLSYYLAGAPDV----AGSKMNPWLHYITYGDREGRSG 240
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 68/219 (31%), Gaps = 33/219 (15%)
Query: 385 HFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFK 441
H+ ++G E RD F S YL +Y D+ + HY+ G+ EGR P F
Sbjct: 152 HYLKYGWKEYRDPNPYFHSEWYLKAYSDVAHAN----INPLVHYVMSGIHEGRQPHYLFD 207
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVF 499
Y+A D+ + + H+ +G EGR F+ Y
Sbjct: 208 LSYYLAGAPDVAGSKMNPWL-------HYITYGDREGRSGHPLFNPDYYCAQNKS----- 255
Query: 500 GSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
HY G ++P AF Y + + ++ + G
Sbjct: 256 -ELIDLPFAHYSMFGSVSDKSPCPAFDPTHYRLLYPESLSRRGEPLLDYLLA-----PAG 309
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
+ + ++ S + S Y+
Sbjct: 310 WRRHFHPLIDAEVQRGS-----SARASSAIDPLTEYVQF 343
>gi|209522962|ref|ZP_03271519.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209496549|gb|EDZ96847.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 1252
Score = 97.2 bits (240), Expect = 7e-18, Method: Composition-based stats.
Identities = 49/293 (16%), Positives = 89/293 (30%), Gaps = 14/293 (4%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+G +G + P +I G+D++D GG N L E SI
Sbjct: 831 FGGNDTLVG---VGGRNILEGGPGNDSIVGGSGNDVID----GGEGNDTLLGNEGNDSIF 883
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + I S+ G G+D +IG + N+ GND G +G DT F +
Sbjct: 884 GGPGNDSIIGGSGINSLFGEGGDDTIIGGNDGNLLSGGDGNDSLTGGTGNDTIFGGDGND 943
Query: 315 LYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ R +N + + D + + ++ + + + + +
Sbjct: 944 TIRTERGDNQLF----GDDGNDLIFGGIGRDLIQGGLGNDTLIGGSGNNTIFGGPGNDSI 999
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+ G D + S G + F N + + + G
Sbjct: 1000 VGGEGDDTLFGGEGNDTIEGSGGDNSIFGGAGNDSIIAGPGNDTVFAGPGSDQVFGGDGN 1059
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
L + + + G + F EG + D
Sbjct: 1060 DLIFGDSGNDTLFGGSGDDTISGGAGSDLLTGDAGNNVFYYLNPGEGVDIITD 1112
Score = 84.1 bits (206), Expect = 8e-14, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 86/279 (30%), Gaps = 13/279 (4%)
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY---KIEVQ 212
D F T SY + + D + + D+ + + G +G+ G++ +
Sbjct: 220 DFFGTDRFSYNVTDGTDSDLA-QVVISVQPGDLAQIIE--GIGQGTTGDDSIIGSSGDDV 276
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
TI+ G+DLL G + + + ++ G N T + ++
Sbjct: 277 INGLAGNDTIFGLAGNDLL----QGDEGDDLLFGNQGNDTLDGGPGNDTAYGGQDNDLII 332
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND++ GN N+ G D G G D I+ + I++ +
Sbjct: 333 GGDGNDLLFGNLGNDTLLGGPGADSMYGGDGNDCIR--GGVGNDLIFGDKGNDILWGDDG 390
Query: 333 HKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ + + + L F D + + +I G D
Sbjct: 391 NDTIYGGEGDDLIFGNDGADLLFGGVGNDTIFGGPGNDTIIGGEGDDQIAGEVGDDLLFG 450
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G D + GS A + T G
Sbjct: 451 GLGADTLTGGSGSDTFAIAEGSGGGSVEEANVINDFTGG 489
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/332 (14%), Positives = 87/332 (26%), Gaps = 31/332 (9%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+D + G ++ + T I G+ N T+ + G GND ++G S N+V
Sbjct: 806 VDDFIQGTDEDDNIVGTALSEYIQGFGGNDTLVGVGGRNILEGGPGNDSIVGGSGNDVID 865
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
GND G+ G D+ + P I + + + +D L D
Sbjct: 866 GGEGNDTLLGNEGNDSI-FGGPGNDSIIGGSGINSLFGEGGDDTIIGGNDGNLLSGGDGN 924
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ + + G + GRD+ D
Sbjct: 925 DSLTGGTGNDTIFGGDGNDTIRTERGDNQLFGDDGNDLIFGGIGRDLIQGGLG----NDT 980
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L G++ + G + L ++ + + D G D
Sbjct: 981 LIGGSGNNTI-----FGGPGNDSIVGGEGDDTLFGGEGNDTIEGSGGDNSIFGGAGNDSI 1035
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
D + GSD + + G L
Sbjct: 1036 IAG----------------PGNDTVFAGPGSD-----QVFGGDGNDLIFGDSGNDTLFGG 1074
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
+ + + AG + F EG
Sbjct: 1075 SGDDTISGGAGSDLLTGDAGNNVFYYLNPGEG 1106
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 68/236 (28%), Gaps = 28/236 (11%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I T SI G + I +++ G +GND++ G+ +++ F + GND DG
Sbjct: 258 IGQGTTGDDSIIGSSGDDVINGLAGNDTIFGLAGNDLLQGDEGDDLLFGNQGNDTLDGGP 317
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT + D L + +
Sbjct: 318 GNDTAY-------------GGQDNDLIIGGDGNDLLFG------NLGNDTLLGGPGADSM 358
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ + +G D+ K +G D Y G DDL +FG+D
Sbjct: 359 YGGDGNDCIRGGVGNDLIFGDKGNDILWGDDGNDTI-----YGGEGDDL--IFGNDGADL 411
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ G + + + D +G D + +
Sbjct: 412 L--FGGVGNDTIFGGPGNDTIIGGEGDDQIAGEVGDDLLFGGLGADTLTGGSGSDT 465
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 78/268 (29%), Gaps = 12/268 (4%)
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
+ D G I I G G ++G + D
Sbjct: 258 IGQGTTGDDSIIGSSGDDVINGLAGNDTIFGLAGNDLLQGDEGDDLLFGNQGNDTLDGGP 317
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY-----KIEVQQK 214
+ +Y + ++ G + GA G+
Sbjct: 318 GNDTAYGGQDNDLIIGGDGNDLLFGNLGNDTLLGGPGADSMYGGDGNDCIRGGVGNDLIF 377
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
++ G+D + GG + + + + G N TI ++++G
Sbjct: 378 GDKGNDILWGDDGNDTI----YGGEGDDLIFGNDGADLLFGGVGNDTIFGGPGNDTIIGG 433
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D + G +++ F G D G SG DTF S + N I + K
Sbjct: 434 EGDDQIAGEVGDDLLFGGLGADTLTGGSGSDTFAIAEGSGGGSVEE-ANVINDFTGGTDK 492
Query: 335 QDFLSD--VERLRFADQCIDSVNVKQRS 360
L + E+L ++ N R+
Sbjct: 493 IGLLGNLTFEQLSITQSEENAGNAIIRN 520
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 68/263 (25%), Gaps = 48/263 (18%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++G+D +IG+S ++V +GND G +G D
Sbjct: 261 GTTGDDSIIGSSGDDVINGLAGNDTIFGLAGND--------------------------- 293
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
L+ + + L+ + D+ +
Sbjct: 294 ----------LLQGDEGDDLLFGNQGNDTLDGGPGNDTAYGGQDNDLIIGGDGNDLLFGN 343
Query: 393 EGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFKAL 443
G D DS D +R G+D + + G + +
Sbjct: 344 LGNDTLLGGPGADSMYGGDGNDCIRGGVGNDLIFGDKGNDILWGDDGNDTIYGGEGDDLI 403
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGS 501
+ L + G D ++ V D D L GS
Sbjct: 404 FGNDGADLLFGGVGNDTIFGGPGNDTIIGGEGDDQIAGEVGDDLLFGGLGADTLTGGSGS 463
Query: 502 DRGAAARHYITHGVKEGRNPDAF 524
D A A V+E + F
Sbjct: 464 DTFAIAEGSGGGSVEEANVINDF 486
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 27/261 (10%), Positives = 65/261 (24%), Gaps = 24/261 (9%)
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL-RFADQCIDSVNVKQRSILEYT 365
FF ++ + + D +E + + + ++
Sbjct: 221 FFGTDRFSYNVTDGTDSDLAQVVISVQPGDLAQIIEGIGQGTTGDDSIIGSSGDDVINGL 280
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A + + + G D+ + + ++G D +Y N
Sbjct: 281 AGNDTIFGLAGNDLLQGDEGDDLLFGNQGNDTLDGGPGNDTAYGGQDNDLIIGGDGNDLL 340
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ G ++ ++ + + F + G + +
Sbjct: 341 FGNLGNDTLLGGPGADSMYGGDGNDCIRGGVGNDLI--------FGDKGNDILWGDDGND 392
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
+Y G DDL + G + ++ +I D
Sbjct: 393 TIYGGEGDDLI-------------FGNDGADLLFGGVGNDTIFGGPGNDTIIGGEGDDQI 439
Query: 546 LVQAGKDHFSNFGYEEGRSIT 566
+ G D FG ++T
Sbjct: 440 AGEVGDD--LLFGGLGADTLT 458
>gi|307151488|ref|YP_003886872.1| peptidase S8 and S53 subtilisin kexin sedolisin [Cyanothece sp. PCC
7822]
gi|306981716|gb|ADN13597.1| peptidase S8 and S53 subtilisin kexin sedolisin [Cyanothece sp. PCC
7822]
Length = 1265
Score = 97.2 bits (240), Expect = 8e-18, Method: Composition-based stats.
Identities = 44/260 (16%), Positives = 78/260 (30%), Gaps = 14/260 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ GG+D L G N E + G + N ++ +
Sbjct: 938 GNDNLYGKEDNDVLNGGGGNDNL----YGNEGNDELNGNEGKDYLEGNQGNDSLNGGSES 993
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G+ GND + G + N+ + + GND+ +G G D + + N +Y
Sbjct: 994 DNLLGNEGNDTLKGGTHNDTLWGNQGNDILNGDEGNDLLY--GNEGQDTLKGGSNNDTLY 1051
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D LS E + IL A + L G D
Sbjct: 1052 --GNEDNDLLSGDES------NDQLYGDQGNDILNGDAGNDALYGSTGNDTLSGGVGRDT 1103
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+E D+ + Y + N + Y G + +L
Sbjct: 1104 LYGNENNDLLNGDDDHDLLYGNQDNDTLNGGNGNDTLYGNEGSDILNGGNNNDSLYGNEG 1163
Query: 449 HEDLINAFADAPDLVQVGKD 468
++ L A + G D
Sbjct: 1164 NDTLNGAEGNDTLRGGEGND 1183
Score = 84.5 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 77/552 (13%), Positives = 151/552 (27%), Gaps = 51/552 (9%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGE-WSKVV-----DLTFEET 73
DQ + + LT ++ T L P L W++ + F +
Sbjct: 664 DQNQNGRLDNGEISALTDKDGNYAFTNLTPGITYTVAEVLQANWAQTTPRFLFNADFSDA 723
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGI-----GKGTILSHNALHEI 128
++ + + +N Y + + D +G G G + I
Sbjct: 724 QGNASLDGFTIDNNYNGLWHLSTGRGNQAGHSADDSLYFGTKEGIDGGGNYDVGSTSGRI 783
Query: 129 GHA----LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA--- 181
+ +GL + Y+ L S Q + S
Sbjct: 784 TSSEISLIGLEDAQLSFNYFLQTEGGGFYDQAKVLLSQNGGDFFQIASNQQSLQDPTPGW 843
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVK 240
T + D+ A + + Y + T+ ++ G + + L G +
Sbjct: 844 TNLTLDLTAYTGSKIKIRFDFDSIDYYANNFEGWYIDDITVTNAAGQGIYTVKLDPGQIV 903
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N I+ G +N + + + + G +GND + G N+V GND G
Sbjct: 904 NNINFGNYQP-VKNGTWRNDELIGTKLKDIINGLAGNDNLYGKEDNDVLNGGGGNDNLYG 962
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ G D + + + +E + + +
Sbjct: 963 NEGND--ELNGNEGKDYLEGNQGNDSLNGGSE-----------------SDNLLGNEGND 1003
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
L+ + L G D+ + +EG+D + D L +D
Sbjct: 1004 TLKGGTHNDTLWGNQGNDILNGDEGNDLLYGNEGQDTLKGGS----NNDTLYGNEDNDLL 1059
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ + L A ++ L + + VG+D +
Sbjct: 1060 SGDES-----NDQLYGDQGNDILNGDAGNDALYGSTGNDTLSGGVGRDTLYGNENND-LL 1113
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
D + L D + G + Y G + +L ++ L A
Sbjct: 1114 NGDDDHDLLYGNQDNDTLNGGNGNDTL--YGNEGSDILNGGNNNDSLYGNEGNDTLNGAE 1171
Query: 541 ADAPDLVQAGKD 552
+ G D
Sbjct: 1172 GNDTLRGGEGND 1183
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/365 (13%), Positives = 103/365 (28%), Gaps = 48/365 (13%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ + DV G G + + E+ G N G
Sbjct: 931 DIINGLAGNDNLYGKEDNDVLNGGGGNDNLYGNEGNDELNGNEG-KDYLEGNQGNDSL-- 987
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ E+D+ L + + + + D +G +++ +YG + G + K
Sbjct: 988 NGGSESDNLLGNEGNDTLKGGTHNDTLWGNQGNDILNGDEGNDLLYG----NEGQDTLKG 1043
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ GD+ D L G N I ++ G N T++ +
Sbjct: 1044 GSNNDTLYGNEDNDLLSGDESND-QLYGDQGNDILNGDAGNDALYGSTGNDTLSGGVGRD 1102
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+ ND++ G+ +++ + + ND +G +G DT +
Sbjct: 1103 TLYGNENNDLLNGDDDHDLLYGNQDNDTLNGGNGNDTLY--------------------- 1141
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D L+ L + L G D +
Sbjct: 1142 -GNEGSDILNG---------------GNNNDSLYGNEGNDTLNGAEGNDTLRGGEGNDLL 1185
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+D+ + + D F + + + L Y+ S
Sbjct: 1186 TGGLDKDVFVLAANF---GSDTITDFMDGQDKLGLSAGLSFAQLTLTSNQSNTLIYLTSS 1242
Query: 450 EDLIN 454
+L+
Sbjct: 1243 NELLA 1247
>gi|170737362|ref|YP_001778622.1| hemolysin-type calcium-binding region [Burkholderia cenocepacia
MC0-3]
gi|169819550|gb|ACA94132.1| Hemolysin-type calcium-binding region [Burkholderia cenocepacia
MC0-3]
Length = 1532
Score = 96.8 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 58/389 (14%), Positives = 113/389 (29%), Gaps = 37/389 (9%)
Query: 201 SLGNNIYKIEVQQKDSPFIQT-IYDSGGDDLLDLTLIGGVKNYID-------LNTESWSS 252
+ + I Q K SP ++ + + G+D+ D ++ID L +
Sbjct: 557 NSRDFIMFGPTQIKVSPSNRSYLIGTDGNDVFDANYYAAYGHWIDSNLLVNFLAGDGNDM 616
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+GG +N + T +++ G G+D + G ++ +GNDV DG G D F +
Sbjct: 617 MGGSSRNDNLWGGTGNDTLFGYDGDDRLYGEEGDDELNGGAGNDVLDGGIGNDKLFGHVG 676
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCID----------SVNVKQR 359
+ + ++ ++ + A+ + L+ E + + D
Sbjct: 677 NDIMNGGDGDDIMLGFTASNDSKQTLAWGETDDDIMYGGAGNDRMWGGVGHDYMDGGDGA 736
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVF 415
+ + + G D G D F D L+ G DD+ F
Sbjct: 737 DFVSGGDGNDTVFGGAGNDELHGDAGNDRLLGEAGNDRIFGEAGDDVLWGGDGDDVLVGF 796
Query: 416 GS----------DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ Y +G L+ ++ L D
Sbjct: 797 TASNDAKQTLSWGESDNDMLYGGNGNDALYGGLGNDYLDGGNDNDFLDGGDGDDRLFGGA 856
Query: 466 GKDHFSNFGCEE--GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
G D + + D D + G D
Sbjct: 857 GDDELNGGNGHDALSGETGNDKIFGGAGNDTIWGGDGDDILVGFTASNDAKQSLAAWETD 916
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKD 552
+ A ++ ++ + +AG D
Sbjct: 917 DDTIYGGAGNDLILGGLGNDLLHGEAGND 945
Score = 92.2 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 67/466 (14%), Positives = 113/466 (24%), Gaps = 49/466 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D S T + D G I + G
Sbjct: 731 DGGDGADFVSGGDGNDTVFGGAGNDELHGDAGNDRLLGEAGNDRIFGEAGDDVLWGGDGD 790
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMS-----YFMPQDSMMDASFGYCATPMVSDIV 189
+ + E+D+ + + Y + +D
Sbjct: 791 DVLVGFTASNDAKQTLSWGESDNDMLYGGNGNDALYGGLGNDYLDGGNDNDFLDGGDGDD 850
Query: 190 AVQKIYGAPKGSLGN-----NIYKIEVQQKDSPFIQTIYDSGGDDLL-DLTLIGGVKNYI 243
+ G + + GN + + TI+ GDD+L T K +
Sbjct: 851 RLFGGAGDDELNGGNGHDALSGETGNDKIFGGAGNDTIWGGDGDDILVGFTASNDAKQSL 910
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+I G N I + + G +GND + G ++ + GND G G
Sbjct: 911 AAWETDDDTIYGGAGNDLILGGLGNDLLHGEAGNDEIQGGDGHDKLYGGDGNDRLFGQVG 970
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D + A L + +N D L
Sbjct: 971 NDILYGGAGDDLLVGFTGDNEAKRTLGPGETDD-----------------------DYLY 1007
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ L+ +G D + EG D + G D ++
Sbjct: 1008 GGEGNDTLLGGLGDDYLDGGAGADHMEGGEGNDTYI--VNSVNDVVLEYANEGYDTVISS 1065
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+YI + E + + D ++ AD G D
Sbjct: 1066 ANYILNANIEELRLVEGFNINGTGNALDNRIVGNSADNILDGVTGADTMIGGKG------ 1119
Query: 482 TFDSYLYLGSYDDLRNVF---GSDRGAAARHYITHGVKEGRNPDAF 524
+ Y+ + D F G D + Y E N F
Sbjct: 1120 --NDTYYVDNVGDRVVEFAGEGIDTVQSKISYTLGEHVENLNLLDF 1163
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 70/527 (13%), Positives = 143/527 (27%), Gaps = 66/527 (12%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
F +SN+ +++ D+ G+G + EI G
Sbjct: 900 FTASNDAKQSLAAWETDDDTIYGGAGNDLILGGLGNDLLHGEAGNDEIQGGDGHDKLYGG 959
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA--P 198
+G ++G + + D+ + G P +D +YG
Sbjct: 960 DGNDRLFGQVGNDILYGGAGDDLLVGFTGDNEAKRTLG----PGETDD---DYLYGGEGN 1012
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
LG + + G+D + ++ E + ++
Sbjct: 1013 DTLLGG---LGDDYLDGGAGADHMEGGEGNDTYIV--NSVNDVVLEYANEGYDTVISSAN 1067
Query: 259 ---NMTIAQHTVIE----SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
N I + ++E + G++ ++ ++GNSA+N+ +G D G G DT++
Sbjct: 1068 YILNANIEELRLVEGFNINGTGNALDNRIVGNSADNILDGVTGADTMIGGKGNDTYYVD- 1126
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-----------CIDSVNVKQRS 360
+ ++ F I ++ VE L D + + +
Sbjct: 1127 -NVGDRVVEFAGEGIDTVQSKISYTLGEHVENLNLLDFGKPEKGLVDGVAVHVYGYPKAN 1185
Query: 361 ILEYTASYED--------------LIQVIGQDVFESM--KHFYEFGLSEGRDITFDSYLY 404
L+Y L+ G + E + + + D
Sbjct: 1186 ELDYMQGDAVPRFQGTCALTSIANLLTQTGTPITEGDVVRRAIDNQWAVTSPAATDYQRG 1245
Query: 405 LGSYDDLRNVFGSDRGAA--ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
+Y + + S A Y H V L + +A+ D +
Sbjct: 1246 GSNYVQQQALLASYGIANNLLAGYDEHAVANLVRSGRGVILALNSGRLWEDSAYLDGGGV 1305
Query: 463 VQVGKDHFSNFGCEEGRFVTF-----------DSYLYLGSYDDLRNVFGSDRGAAARHYI 511
V + +G +G F D Y+ + + A
Sbjct: 1306 NHVVTVTGAVYGDADGELKGFYIADSGRRRVSDMTRYISLQEFRAAANVPNAYAIYTAEA 1365
Query: 512 THGVKEGRNPDAFKALEYI---ASHEDLINAFADAPDLVQAGKDHFS 555
E + I + L + + G D +
Sbjct: 1366 LKLWNEDIDGTGNALDNTIIGNRGNNVLDGGAGNDILIGGLGNDTYR 1412
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE----NAIIV 327
G++ ++ +IGN NNV +GND+ G G DT+ + S I + N+ ++
Sbjct: 1376 TGNALDNTIIGNRGNNVLDGGAGNDILIGGLGNDTYRFGRGSGCDTIRDDDETLGNSDVI 1435
Query: 328 YDANEHKQDFLS 339
D L
Sbjct: 1436 SIGAGVSADQLW 1447
>gi|320103847|ref|YP_004179438.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC
43644]
gi|319751129|gb|ADV62889.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC
43644]
Length = 555
Score = 96.8 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 70/221 (31%), Gaps = 16/221 (7%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
I+ G DL+DLT G + G + + T+ + ++
Sbjct: 241 DPNGGGAVNFNIFTGAGSDLVDLTGTTGAH-----------VVNGGDGDDTLIGGSGDDT 289
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GNDV+ G + ++ GND G +G D+ F + + ++
Sbjct: 290 LAGGAGNDVLAGGAGADLLIGGVGNDSLSGGAGQDSLF--GGDGDDTLAGGDGDDLLVGG 347
Query: 331 NEHKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ F D + F D L + L+ G D F
Sbjct: 348 DGDDILFGGDGNDILFGGDGNDALAGGSGDDTLFGNDGEDVLLGGPGNDEIFGGLGFDAI 407
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G +I G ++ +R G+ R Y +
Sbjct: 408 DGGPGNNIL--DAGRDGIHETIRVGDGNTIVYVHRPYFGNA 446
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 66/221 (29%), Gaps = 25/221 (11%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA + T+ GDD L GG N + + G
Sbjct: 255 GAGSDLVDLTGTTGAHVVNGGDGDDTLIGGSGDDTL----AGGAGNDVLAGGAGADLLIG 310
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N +++ +S+ G G+D + G +++ G+D+ G G D F
Sbjct: 311 GVGNDSLSGGAGQDSLFGGDGDDTLAGGDGDDLLVGGDGDDILFGGDGNDILF------- 363
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + + L D + + ++ +
Sbjct: 364 ----GGDGNDALAGGSGDDT--------LFGNDGEDVLLGGPGNDEIFGGLGFDAIDGGP 411
Query: 376 GQDVFESMKH--FYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
G ++ ++ + + +G I + Y G+ +D V
Sbjct: 412 GNNILDAGRDGIHETIRVGDGNTIVYVHRPYFGNAEDRAVV 452
>gi|291567288|dbj|BAI89560.1| hemolysin-type calcium-binding region protein [Arthrospira platensis
NIES-39]
Length = 1254
Score = 96.8 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/290 (16%), Positives = 83/290 (28%), Gaps = 8/290 (2%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+G +G + P ++ G+D++D GG N L E SI
Sbjct: 833 FGGNDTLVG---VGGRNILEGGPGNDSLVGGSGNDVID----GGEGNDTLLGNEGNDSIF 885
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + I S+ G G+D +IG N+ GND G +G DT +
Sbjct: 886 GGPGNDSIIGGSGINSLFGEGGDDTIIGGDDGNLLSGGVGNDSLTGGTGNDTI-FGGDGD 944
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
I + + D + + ++ + + + + ++
Sbjct: 945 DTIITERGDNQLFGDDGDDFIWGGIGRDLIQGGPGNDTLIGGSGNNTIFGGLGNDSIVGG 1004
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D + S G + F N + Y G
Sbjct: 1005 KGDDTLFGGEGNDTIEGSAGDNSIFGGAGNDSIIAGPGNDTVFAGPGNDQVYGGDGNNLI 1064
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
L + + + G + F EG + D
Sbjct: 1065 FGDSGNDTLYGGSGDDTISGGAGSDLLTGDSGNNVFYYLNPGEGVDIITD 1114
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/289 (15%), Positives = 90/289 (31%), Gaps = 24/289 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + + I GG+D L + + + G N ++ + +
Sbjct: 818 DDNIVGTALSEYIQGFGGNDTL-------------VGVGGRNILEGGPGNDSLVGGSGND 864
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND ++GN N+ F GND G SG+++ + I + ++
Sbjct: 865 VIDGGEGNDTLLGNEGNDSIFGGPGNDSIIGGSGINSL-FGEGGDDTIIGGDDGNLLSGG 923
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + + D + + + L + + IG+D+ +
Sbjct: 924 VGNDSLTGGTGNDTIFGGDGDDTIITERGDNQLFGDDGDDFIWGGIGRDLIQGGPGNDTL 983
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G + F G +D D + G ++ A +
Sbjct: 984 IGGSGNNTIFG-----GLGNDSIVGGKGDDTL----FGGEGNDTIEGSAGDNSIFGGAGN 1034
Query: 450 EDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ +I + G D + G + + LY GS DD +
Sbjct: 1035 DSIIAGPGNDTVFAGPGNDQVYGGDGNNLIFGDSGNDTLYGGSGDDTIS 1083
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/309 (15%), Positives = 86/309 (27%), Gaps = 21/309 (6%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA------ 190
P + + + +Y D F Y T +A
Sbjct: 187 PDGDTLSVQNFSSTANGSLIFNGAGIFTYRPNPDFFGTDGFSYNVTDGTDSDLAQVVISV 246
Query: 191 -----VQKIYGAPKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
Q I G +G+ G++ + TI+ G+DLL G +
Sbjct: 247 QPGDFAQIIEGIGQGTTGDDSIIGSSGDDVINGLAGNDTIFGLAGNDLL----QGDEGDD 302
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + ++ G N T + ++G GND++ GN N+ G D G
Sbjct: 303 LLFGNQGNDTLDGGPGNDTAYGGQDNDLMIGGDGNDLLFGNLGNDTLLGGPGADSMYGGD 362
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF-ADQCIDSVNVKQRSI 361
G D I+ + I++ + + + + + L F D
Sbjct: 363 GNDCIR--GGVGNDLIFGDKGNDILWGDDGNDTIYGGEGDDLIFGNDGADLLFGGVGNDT 420
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + +I G D G D + GS A
Sbjct: 421 IFGGPGNDTIIGGEGDDQIAGEVGDDLLFGGPGADTLTGGSGSDTFAIAEGSGGGSVEEA 480
Query: 422 AARHYITHG 430
+ T G
Sbjct: 481 NVINDFTGG 489
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/289 (15%), Positives = 78/289 (26%), Gaps = 33/289 (11%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A Y G + + V + + S + + I T
Sbjct: 210 AGIFTYRPNPDFFGTDGFSYNVTDGTDSDLAQVVIS-----VQPGDFAQIIEGIGQGTTG 264
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
SI G + I +++ G +GND++ G+ +++ F + GND DG G DT +
Sbjct: 265 DDSIIGSSGDDVINGLAGNDTIFGLAGNDLLQGDEGDDLLFGNQGNDTLDGGPGNDTAY- 323
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
D L + + +
Sbjct: 324 ------------GGQDNDLMIGGDGNDLLFG------NLGNDTLLGGPGADSMYGGDGND 365
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ +G D+ K +G D Y G DDL +FG+D +
Sbjct: 366 CIRGGVGNDLIFGDKGNDILWGDDGNDTI-----YGGEGDDL--IFGNDGADLL--FGGV 416
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
G + + + D G D + +
Sbjct: 417 GNDTIFGGPGNDTIIGGEGDDQIAGEVGDDLLFGGPGADTLTGGSGSDT 465
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 78/268 (29%), Gaps = 12/268 (4%)
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
+ D G I I G G ++G + D
Sbjct: 258 IGQGTTGDDSIIGSSGDDVINGLAGNDTIFGLAGNDLLQGDEGDDLLFGNQGNDTLDGGP 317
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY-----KIEVQQK 214
+ +Y + +M G + GA G+
Sbjct: 318 GNDTAYGGQDNDLMIGGDGNDLLFGNLGNDTLLGGPGADSMYGGDGNDCIRGGVGNDLIF 377
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
++ G+D + GG + + + + G N TI ++++G
Sbjct: 378 GDKGNDILWGDDGNDTI----YGGEGDDLIFGNDGADLLFGGVGNDTIFGGPGNDTIIGG 433
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D + G +++ F G D G SG DTF S + N I + K
Sbjct: 434 EGDDQIAGEVGDDLLFGGPGADTLTGGSGSDTFAIAEGSGGGSVEE-ANVINDFTGGTDK 492
Query: 335 QDFLSD--VERLRFADQCIDSVNVKQRS 360
L + E+L ++ N R+
Sbjct: 493 IGLLGNLTFEQLSITQSEENAGNAIIRN 520
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 35/255 (13%), Positives = 62/255 (24%), Gaps = 47/255 (18%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++G+D +IG+S ++V +GND G +G D
Sbjct: 261 GTTGDDSIIGSSGDDVINGLAGNDTIFGLAGND--------------------------- 293
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
L+ + + L+ + D+ +
Sbjct: 294 ----------LLQGDEGDDLLFGNQGNDTLDGGPGNDTAYGGQDNDLMIGGDGNDLLFGN 343
Query: 393 EGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFKAL 443
G D DS D +R G+D + + G + +
Sbjct: 344 LGNDTLLGGPGADSMYGGDGNDCIRGGVGNDLIFGDKGNDILWGDDGNDTIYGGEGDDLI 403
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF-DSYLYLGSYDDLRNVFGSD 502
+ L + G D ++ D L+ G D
Sbjct: 404 FGNDGADLLFGGVGNDTIFGGPGNDTIIGGEGDDQIAGEVGDDLLFGGPGADTLTGGSGS 463
Query: 503 RGAAARHYITHGVKE 517
A G E
Sbjct: 464 DTFAIAEGSGGGSVE 478
Score = 47.1 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 28/261 (10%), Positives = 66/261 (25%), Gaps = 24/261 (9%)
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL-RFADQCIDSVNVKQRSILEYT 365
FF ++ + + DF +E + + + ++
Sbjct: 221 FFGTDGFSYNVTDGTDSDLAQVVISVQPGDFAQIIEGIGQGTTGDDSIIGSSGDDVINGL 280
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A + + + G D+ + + ++G D +Y N
Sbjct: 281 AGNDTIFGLAGNDLLQGDEGDDLLFGNQGNDTLDGGPGNDTAYGGQDNDLMIGGDGNDLL 340
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ G ++ ++ + + F + G + +
Sbjct: 341 FGNLGNDTLLGGPGADSMYGGDGNDCIRGGVGNDLI--------FGDKGNDILWGDDGND 392
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
+Y G DDL + G + ++ +I D
Sbjct: 393 TIYGGEGDDLI-------------FGNDGADLLFGGVGNDTIFGGPGNDTIIGGEGDDQI 439
Query: 546 LVQAGKDHFSNFGYEEGRSIT 566
+ G D FG ++T
Sbjct: 440 AGEVGDD--LLFGGPGADTLT 458
>gi|254415759|ref|ZP_05029517.1| hypothetical protein MC7420_3543 [Microcoleus chthonoplastes PCC
7420]
gi|196177465|gb|EDX72471.1| hypothetical protein MC7420_3543 [Microcoleus chthonoplastes PCC
7420]
Length = 393
Score = 96.8 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 86/242 (35%), Gaps = 31/242 (12%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR---DITFDSYLYLGSYD 409
V+V + + V + HF + GL EGR +++ YL +
Sbjct: 1 MVDVLFDESVYLANYPDVATAVAAGLFGSGLDHFLKHGLGEGRVEISSSYEEDTYLDNNP 60
Query: 410 DLRNVFGSD-RGAAARHYITHGVKEGR------------NPDAFKALEYIASHEDLINAF 456
D+ + + HY +G EGR + F Y++ + D+ A
Sbjct: 61 DVAAAVTAGLFSSGLEHYALYGQFEGRAGVFSDGVVPPASFSLFDESSYLSLNPDVAAAV 120
Query: 457 ADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVF-GSDRGAAARHYITH 513
G +HF G +EGR ++ YL + D+ G G+ H+ H
Sbjct: 121 TAGAFN--SGFEHFQQLGLQEGRISSPLWNEGAYLAANPDVAAAVTGGAFGSGLHHFALH 178
Query: 514 GVKEGRN--------PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
G E R P F Y+ + D+ A +G +H++ FG EGR
Sbjct: 179 GQLENRPGALPGALVPFGFNEEFYLLDNPDVAAAV--NAGGFGSGLEHYNEFGQFEGRGA 236
Query: 566 TF 567
F
Sbjct: 237 YF 238
Score = 95.6 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 32/236 (13%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGR--NPDAFKALEYIASHEDL 452
D+ FD +YL +Y D+ + G+ H++ HG+ EGR +++ Y+ ++ D+
Sbjct: 3 DVLFDESVYLANYPDVATAVAAGLFGSGLDHFLKHGLGEGRVEISSSYEEDTYLDNNPDV 62
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFV-------------TFDSYLYLGSYDDLRNVF 499
A L G +H++ +G EGR FD YL D+
Sbjct: 63 AAAVTAG--LFSSGLEHYALYGQFEGRAGVFSDGVVPPASFSLFDESSYLSLNPDVAAAV 120
Query: 500 -GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+ H+ G++EGR + Y+A++ D+ A +G HF+
Sbjct: 121 TAGAFNSGFEHFQQLGLQEGRISSPLWNEGAYLAANPDVAAAV--TGGAFGSGLHHFALH 178
Query: 558 GYEEGRS---------ITFNPDLYLTSYDDLWNVF-GSDRSAAAQHYITHGMKEGR 603
G E R FN + YL D+ + +HY G EGR
Sbjct: 179 GQLENRPGALPGALVPFGFNEEFYLLDNPDVAAAVNAGGFGSGLEHYNEFGQFEGR 234
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 72/189 (38%), Gaps = 23/189 (12%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR---FVTFDSYLYLGSYDDLR 496
F Y+A++ D+ A A L G DHF G EGR +++ YL + D+
Sbjct: 6 FDESVYLANYPDVATAVAAG--LFGSGLDHFLKHGLGEGRVEISSSYEEDTYLDNNPDVA 63
Query: 497 NVFGSD-RGAAARHYITHGVKEGRNP------------DAFKALEYIASHEDLINAFADA 543
+ + HY +G EGR F Y++ + D+ A
Sbjct: 64 AAVTAGLFSSGLEHYALYGQFEGRAGVFSDGVVPPASFSLFDESSYLSLNPDVAAAVTAG 123
Query: 544 PDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVF-GSDRSAAAQHYITHGMK 600
+G +HF G +EGR S +N YL + D+ G + H+ HG
Sbjct: 124 AFN--SGFEHFQQLGLQEGRISSPLWNEGAYLAANPDVAAAVTGGAFGSGLHHFALHGQL 181
Query: 601 EGRALGISG 609
E R + G
Sbjct: 182 ENRPGALPG 190
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 58/169 (34%), Gaps = 18/169 (10%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVI-GQDVFESMKHFYEFGLSEGR--DITFDS 401
F+D + + Y + D+ + +HF + GL EGR ++
Sbjct: 90 VFSDGVVPPASFSLFDESSYLSLNPDVAAAVTAGAFNSGFEHFQQLGLQEGRISSPLWNE 149
Query: 402 YLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRN--------PDAFKALEYIASHEDL 452
YL + D+ G G+ H+ HG E R P F Y+ + D+
Sbjct: 150 GAYLAANPDVAAAVTGGAFGSGLHHFALHGQLENRPGALPGALVPFGFNEEFYLLDNPDV 209
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
A G +H++ FG EGR F DL FG
Sbjct: 210 AAAV--NAGGFGSGLEHYNEFGQFEGRGAYFGGTP----GSDLVVAFGG 252
>gi|118580784|ref|YP_902034.1| Ig family protein [Pelobacter propionicus DSM 2379]
gi|118503494|gb|ABK99976.1| Ig family protein [Pelobacter propionicus DSM 2379]
Length = 2954
Score = 96.8 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 71/468 (15%), Positives = 133/468 (28%), Gaps = 30/468 (6%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG--LMHPGSYNGGYPVY 147
+ + F E AD G G + + I G +++ N
Sbjct: 249 YGINFTNVVFQEATAGGADNIYAGTGDDFVYAGGGDDNIDAGTGNDIVYGEDGNDFITGG 308
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
D+ DS + + D + + ++G G+
Sbjct: 309 ADDDVLVGDSDWLAANLHGNDYIDGGDGNDKIAG------LGGNDVLFGG-SGNDELQGG 361
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ ++ GG+D L GG N +TE + + G N I +
Sbjct: 362 AGDDYLDGEAGDDQLFGEGGNDQL----FGGDGNDYLDDTEGDNYLDGEAGNDEIWGGSG 417
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
I+ ++G G+D + GN+ ++ +GN+ G G DT +I +
Sbjct: 418 IDQLMGGDGDDELHGNAGDDYLDGEAGNNTLFGGDGNDTLL--GGDGNDQIQGDAGNDYI 475
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D S L D + L+ + L G DV +
Sbjct: 476 --------DGGSGTNTLIGGDGDDEIYGGSGDDQLQGNLGIDYLDGGEGNDVIDGGDDND 527
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
+ +G D + N A + + G + LE +
Sbjct: 528 QLFGGDGDDWLQAGSGDDYLDGESGNDTLLGGAGADQIFGGEGNNNLQGDAGNDYLEGGS 587
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
++ ++ D + G++ G + + LGS D + + G
Sbjct: 588 GNDLILGGDGDDTIVGGDGENRLEGGGGNDTIEGGSGVDIILGS--DGADTIYGNGGDDQ 645
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
H G L + L+ + + AG D +
Sbjct: 646 LH-----GDAGDTASGNDELYGGDGDDLLVGYGGNDTLVGGAGDDTYV 688
Score = 81.0 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/331 (14%), Positives = 88/331 (26%), Gaps = 31/331 (9%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G T+ +++ G +GND+++GN+ N+ +GND G G D + +
Sbjct: 2508 TLTGTSGADTLTGGAGDDTLSGLAGNDMLVGNAGNDKLDGGAGNDTMLGGPGNDIYVVNS 2567
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYED 370
S + N I + ++VE L I+ ++L ++
Sbjct: 2568 TS--DIVTENANDGIDTVQSSVTLTLGANVENLTLTGTSAINGTGTTLDNMLTGNSAINT 2625
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L G D+ + + G DI G+D +
Sbjct: 2626 LTGGAGNDILDGGAGADKLIGGAGDDIYIVDN--TADVITENANEGTDTVKSGVTLTLGN 2683
Query: 431 VKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
E A+ + D L+ G D + + Y
Sbjct: 2684 NVENLTLTGTSAINGTGNTLDNMLVGNSGTNTLTGGAGNDRLDGGAGADKLIGGAGNDTY 2743
Query: 489 LGSYDDL----RNVFGSDRGAAARHYITHGVKEGRNPDAFKALE---------------- 528
G+D ++ Y E A+
Sbjct: 2744 FIDNSSDTITENASEGTDAVNSSITYTLGANLENLTLVGTSAINGTGNTLNNVLIGNSVV 2803
Query: 529 ----YIASHEDLINAFADAPDLVQAGKDHFS 555
++ L AG D +
Sbjct: 2804 NSLSGGTGNDTLDGGAGADTLTGGAGNDTYL 2834
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 71/502 (14%), Positives = 137/502 (27%), Gaps = 42/502 (8%)
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
+ + D TI I + LG S G + + S
Sbjct: 1725 LLNGSNADDTLIGYATADTISGFGGNDAI-YGLGGNDILSSGDGDDILTGGAGDDILSGD 1783
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-----GSLGNNIYKIEVQQK 214
+Y S D + + A+ +D + + + A + I + +
Sbjct: 1784 AGSDTYLFSPGSGRDTIYNFDASSGKTDALVLGEGLRAADIDISRTNDDLTIAILNSNDQ 1843
Query: 215 DSPFIQTIYDSGGDDLLD---------LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ D ++ + I ++ + T+ S+ GY + I+
Sbjct: 1844 VTIANYFSGDGHDGHAVEEIRIPADNLVYSIADIRQLVLQATDGDDSLIGYAGDDVISGL 1903
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G GND + G N++ +G DV DG G DT+ + +
Sbjct: 1904 GGNDFIAGRGGNDTLTGGLGNDILDGGTGADVMDGGLGDDTYSVDSAADQVIEAVDGGND 1963
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMK 384
V S++E L + Q ++L + L +G D E
Sbjct: 1964 SVETGIT--HTLASNLENLILTGAADVNGFGNDQDNVLTGNSGNNILDGGLGTDTMEGGA 2021
Query: 385 HFYEFGL---------SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
+ G I + + +Y NV +A + + +
Sbjct: 2022 GNDTYYTDTLGDRIVEQNGAGIDTEIRGFDTNYLLTANVENLTLTGSAIYGNGNELDNVI 2081
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
+ + A D + A L G G + + D+ + D
Sbjct: 2082 TGNEADNNLWGAEGNDTLIGGAGNDALFGAGGQDVLIGGAGDDYYEVGDAGDLILEAADE 2141
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKAL-----------EYIASHEDLINAFADAP 544
G D + Y E D L + L +
Sbjct: 2142 ----GDDFVRSTVSYTLSDNIERAAVDGMDDLTLTGNGQDNGLWGNQGNNLLTGGQGNDY 2197
Query: 545 DLVQAGKDHFSNFGYEEGRSIT 566
AG D++ + ++
Sbjct: 2198 VEGGAGDDNYVFNRGDGQDTLN 2219
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/346 (13%), Positives = 90/346 (26%), Gaps = 30/346 (8%)
Query: 208 KIEVQQKDSPFIQTIYD-SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + D GD+ L G + I+ + S
Sbjct: 139 GGNDILEGGAGADIVSDFGDGDNKLFADSYGEMDVLINSGETAASVAEKG---------- 188
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + SGND + G++ N+ F G D+ G G D + +
Sbjct: 189 --DLLSAGSGNDELYGSNRNDALFGGGGEDLIVGGGGDDAIL----ADYNLTSAQKTWNA 242
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
N + +F + V + A + + +++ G D+
Sbjct: 243 TVSQNPYGINFTNVVFQEATAGGADNIYAGTGDDFVYAGGGDDNIDAGTGNDIVYGEDGN 302
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
D+ +L N+ G+D G + L
Sbjct: 303 DFITGGADDDVLVGDSDWLA-----ANLHGNDYID-----GGDGNDKIAGLGGNDVLFGG 352
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ +++L D + G D G + F + + D +
Sbjct: 353 SGNDELQGGAGDDYLDGEAGDDQLFGEGGNDQLFGGDGNDYLDDTEGD---NYLDGEAGN 409
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G+ + D L A + L + G D
Sbjct: 410 DEIWGGSGIDQLMGGDGDDELHGNAGDDYLDGEAGNNTLFGGDGND 455
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/307 (14%), Positives = 86/307 (28%), Gaps = 19/307 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL---------- 125
D + G T S + + D AD G +
Sbjct: 603 GGDGENRLEGGGGNDTIEGGSGVDIILGSDGADTIYGNGGDDQLHGDAGDTASGNDELYG 662
Query: 126 ---HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
++ G G Y + D+ + + A
Sbjct: 663 GDGDDLLVGYGGNDTLVGGAGDDTYVFNLGDGVDTIQDTAGESGIENTLYFGAGITKDDL 722
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI------ 236
V +++ G ++ + P + G +LL L
Sbjct: 723 AFVWQTDSLRINVGTGGDAIILSNCTQNDPTGALPVYSLEFADGSQNLLINFLYAGITQT 782
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + ++ G + N T+ T +++ G GNDV+ G + N++ G+D
Sbjct: 783 GTSGDDTMVGAAGCDTLNGGDGNDTLDGGTGHDTLDGGVGNDVLSGGAGNDILTGGDGDD 842
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ G G DT A + Y + + + + D L + +D + +
Sbjct: 843 LLAGGIGNDTLNGGAGNDTYLFNLADGQETIVEPGWNSVDTLRFGTGIAASDITLRRLGY 902
Query: 357 KQRSILE 363
+
Sbjct: 903 DLYLGIN 909
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/263 (11%), Positives = 65/263 (24%), Gaps = 22/263 (8%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ + + D + + +G G + E G
Sbjct: 649 DAGDTASGNDELYGGDGDDLLVGYGGNDTLVGGAGDDTYVFNLGDGVDTIQDTAGESGIE 708
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
L + D + T + + + D + + +
Sbjct: 709 NTLYFGAGITKDDLAFVWQTDSLRINVGTGGDAIILSNCTQNDPTGALPVYSLEFADGSQ 768
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ + + + T+ G+D LD
Sbjct: 769 NLLINFLYAGITQTGTSGDDTMVGAAGCDTLNGGDGNDTLD------------------- 809
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G + T+ + + G +GND++ G +++ GND +G +G DT+ +
Sbjct: 810 ---GGTGHDTLDGGVGNDVLSGGAGNDILTGGDGDDLLAGGIGNDTLNGGAGNDTYLFNL 866
Query: 312 PSYLYKIYRFENAIIVYDANEHK 334
I +
Sbjct: 867 ADGQETIVEPGWNSVDTLRFGTG 889
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 64/425 (15%), Positives = 131/425 (30%), Gaps = 29/425 (6%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
G ++ +D++L + ++ + A + D+ A +
Sbjct: 1618 GAGDDALNGGAGSDTYLFGRGAGHDVINNYDTGAGKTDALVLADDLHATDIDIRRSDSNS 1677
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGD-DLLDLTLIGGVKNYIDL------NTESWSSIGG 255
+ + I + + + D++ + D+ + + ++ G
Sbjct: 1678 DDLVLTIRDSGDQVTIVNCLAGNQYALDVIRIPADNLTYTIEDIKSLLLNGSNADDTLIG 1737
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
Y TI+ +++ G GND++ +++ +G+D+ G +G DT+ + S
Sbjct: 1738 YATADTISGFGGNDAIYGLGGNDILSSGDGDDILTGGAGDDILSGDAGSDTYLFSPGSGR 1797
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
IY F DA+ K D L E LR AD ID + S + +
Sbjct: 1798 DTIYNF-------DASSGKTDALVLGEGLRAAD--IDISRTNDDLTIAILNSNDQVTIAN 1848
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
S + E R D+ +Y + + +D + Y V G
Sbjct: 1849 YF----SGDGHDGHAVEEIRIPA-DNLVYSIADIRQLVLQATDGDDSLIGYAGDDVISGL 1903
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS---- 491
+ F + ++ L + G D ++ V + + +
Sbjct: 1904 GGNDF--IAGRGGNDTLTGGLGNDILDGGTGADVMDGGLGDDTYSVDSAADQVIEAVDGG 1961
Query: 492 YDDLRNVFGSDRGAAARHYITHGVK--EGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D + + + I G G D L + + L A
Sbjct: 1962 NDSVETGITHTLASNLENLILTGAADVNGFGNDQDNVLTGNSGNNILDGGLGTDTMEGGA 2021
Query: 550 GKDHF 554
G D +
Sbjct: 2022 GNDTY 2026
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 63/538 (11%), Positives = 126/538 (23%), Gaps = 94/538 (17%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
F +N+ T + D + + +G G + + E + L H G
Sbjct: 1005 FAFNNSSTHITMDGGTGNDTLRGHAGDDTYIFNLGDG----QDMIDEGAYYLDFSHSGRI 1060
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G D+ D V +
Sbjct: 1061 YFGGGF---------DTLQFGEGIAASDISLTRSYHSLILHINGTGDQVTLLG------- 1104
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ F +++ DS D + YI + +G +
Sbjct: 1105 -----------WGNNQGFDESVVDSRIDQVTFADGTVWNAAYIWSRLAGGTVVGTNGYDH 1153
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
A ++ G +G+D++ GN N++ G D G G DT+ + I
Sbjct: 1154 LYAWSLENATLQGLAGDDMLEGNKGNDILIGGLGADTMQGGVGNDTYVFNLGDGRDVITE 1213
Query: 321 FENA-IIVYDANEHKQDFLS-----------------------------DVERLRFADQC 350
+ + D L+ +E++ F D
Sbjct: 1214 GGGSLDTIRFGEGIAPDDLTFNRSGYDLVLSINGSDQVTVQNWGNNVNARIEQIEFFDGT 1273
Query: 351 IDSVNV----------------------KQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ + SIL+ A + L G D +
Sbjct: 1274 VWDTAYVLSRANLPVVGTVGSDSLSAWAGENSILQGLAGNDALYGGTGDDTLDGGAGNDT 1333
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G D LG D + + E + ++
Sbjct: 1334 TNGGTGNDTYL---FNLGDGQDTIS--EGGGTLDTIRFGAGIAPEDISFSRSGYDLMLSI 1388
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ + + + F +D+ + V +
Sbjct: 1389 NGSSDQVRIKSWSGGEGNRIERVEFSG----GTVWDAAYIQSMVATVPLVGTNGNDILQA 1444
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+G +G D L ++ L + G + + + +I+
Sbjct: 1445 WPDENGAIQGLAGD--DVLYGNNGNDTLNGGVGNDTLYGGNGNESYLFNLGDGQDTIS 1500
Score = 54.4 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 68/544 (12%), Positives = 127/544 (23%), Gaps = 94/544 (17%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+S + D G G T L G +++ G
Sbjct: 1601 AGNDALFGNSGNDTLVGGAGDDALNGGAGSDTYLFGR-----GAGHDVINNYDTGAGKTD 1655
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
V D + + + S D ++ +V+ + Q + N
Sbjct: 1656 ALVLADDLHATDIDIRRSDSNSDDLVLTIRDSGDQVTIVNCLAGNQYALDVIRIPADNLT 1715
Query: 207 YKIEV----QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
Y IE S T+ D + +I G N +
Sbjct: 1716 YTIEDIKSLLLNGSNADDTLIGYATADTIS-------------GFGGNDAIYGLGGNDIL 1762
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSG----LDTFFYYAPSYLY 316
+ + + G +G+D++ G++ ++ F SG D D
Sbjct: 1763 SSGDGDDILTGGAGDDILSGDAGSDTYLFSPGSGRDTIYNFDASSGKTDALVLGEGLRAA 1822
Query: 317 KIYRFENAIIVYDANEHKQDFLS-------------DVERLRF----------------- 346
I + A + D ++ VE +R
Sbjct: 1823 DIDISRTNDDLTIAILNSNDQVTIANYFSGDGHDGHAVEEIRIPADNLVYSIADIRQLVL 1882
Query: 347 --ADQCIDSVNVKQRSILEYTASYE---------DLIQVIGQDVFESMKHFYEFGLSEGR 395
D + ++ + L +G D+ + G
Sbjct: 1883 QATDGDDSLIGYAGDDVISGLGGNDFIAGRGGNDTLTGGLGNDILDGGTGADVMDGGLGD 1942
Query: 396 DITFDSYL-------YLGSYDDLRNVFGSDRGAAARHYITHGVK--EGRNPDAFKALEYI 446
D G D + + + I G G D L
Sbjct: 1943 DTYSVDSAADQVIEAVDGGNDSVETGITHTLASNLENLILTGAADVNGFGNDQDNVLTGN 2002
Query: 447 ASHEDLINAFADAPDLVQVGKDHFS-----------NFGCEEGRFVTFDSYLYLGSYDDL 495
+ + L G D + N + FD+ L + +
Sbjct: 2003 SGNNILDGGLGTDTMEGGAGNDTYYTDTLGDRIVEQNGAGIDTEIRGFDTNYLLTANVEN 2062
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPD-----AFKALEYIASHEDLINAFADAPDLVQAG 550
+ GS + + L A ++ L A + AG
Sbjct: 2063 LTLTGSAIYGNGNELDNVITGNEADNNLWGAEGNDTLIGGAGNDALFGAGGQDVLIGGAG 2122
Query: 551 KDHF 554
D++
Sbjct: 2123 DDYY 2126
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/374 (11%), Positives = 87/374 (23%), Gaps = 55/374 (14%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+G ++ A ++ G +G+DV+ GN+ N+ GND G +G +++ +
Sbjct: 1434 VGTNGNDILQAWPDENGAIQGLAGDDVLYGNNGNDTLNGGVGNDTLYGGNGNESYLFNLG 1493
Query: 313 SYLYKIYRFENAI-----------IVYDANEHKQDFL--------------------SDV 341
I + + D + + +
Sbjct: 1494 DGQDTISESGGTLDTIRFGAGIAPSDLTFSRDGYDLIMSINGSSDQIRIQNWGAGISNRI 1553
Query: 342 ERLRFADQCIDSVNV-----------------------KQRSILEYTASYEDLIQVIGQD 378
E++ F+D + V+ + +I++ A + L G D
Sbjct: 1554 EQVEFSDATVWDVSYIEARLAEVAIAGTDDNDTLQAWVGENTIIQGLAGNDALFGNSGND 1613
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
G D + + A H
Sbjct: 1614 TLVGGAGDDALNGGAGSDTYLFGRGAGHDVINNYDTGAGKTDALVLADDLHATDIDIRRS 1673
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ + + + D + L + T + L +
Sbjct: 1674 DSNSDDLVLTIRDSGDQVTIVNCLAGNQYALDVIRIPADNLTYTIEDIKSLLLNGSNADD 1733
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
A G L + L D AG D +
Sbjct: 1734 TLIGYATADTISGFGGNDAIYGLGGNDILSSGDGDDILTGGAGDDILSGDAGSDTYLFSP 1793
Query: 559 YEEGRSI-TFNPDL 571
+I F+
Sbjct: 1794 GSGRDTIYNFDASS 1807
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 42/374 (11%), Positives = 95/374 (25%), Gaps = 28/374 (7%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-- 254
+ G I + +D F + +S + + N + ++G
Sbjct: 29 VRDAATGKIIAILNKDFQDGDFGIHLKESLSISTTNTITGDLTPVAANSNEYQYDALGQA 88
Query: 255 --GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + + ND + ++ ++ G+DV + G +
Sbjct: 89 LPGNIRTDALGNAVCDLNTPSPDRNDYIYDSTGSDRIQAGGGDDVICANKGGNDILEGGA 148
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ + + D L + + ++ +L + ++L
Sbjct: 149 GADIVSDFGDGDNKLFADSYGEMDVLIN-------SGETAASVAEKGDLLSAGSGNDELY 201
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF-----GSDRGAAARHYI 427
D G D Y + G +
Sbjct: 202 GSNRNDALFGGGGEDLIVGGGGDDAILADYNLTSAQKTWNATVSQNPYGINFTNVVFQEA 261
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
T G + Y +D I+A + + F G ++ V +L
Sbjct: 262 TAGGADNIYAGTGDDFVYAGGGDDNIDAGTGNDIVYGEDGNDFITGGADDDVLVGDSDWL 321
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
+ + G G + L + +++L D
Sbjct: 322 AANLHGNDYIDGGD------------GNDKIAGLGGNDVLFGGSGNDELQGGAGDDYLDG 369
Query: 548 QAGKDHFSNFGYEE 561
+AG D G +
Sbjct: 370 EAGDDQLFGEGGND 383
Score = 44.4 bits (103), Expect = 0.055, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 62/252 (24%), Gaps = 17/252 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
N +S + D G G T + I G
Sbjct: 1983 TGAADVNGFGNDQDNVLTGNSGNNILDGGLGTDTMEGGAGNDTYYTDTLGDRIVEQNGAG 2042
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G Y + + EN + S + + + A ++
Sbjct: 2043 IDTEIRGFDTNYLLTANVENLTLTGSAIYGNGNELDNVITGN-----------EADNNLW 2091
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-----VKNYIDLNTESW 250
GA + + GDD ++ G D +
Sbjct: 2092 GAEGNDTLIGGAG-NDALFGAGGQDVLIGGAGDDYYEVGDAGDLILEAADEGDDFVRSTV 2150
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S ++ G+ ++ + GN NN+ GND +G +G D + +
Sbjct: 2151 SYTLSDNIERAAVDGMDDLTLTGNGQDNGLWGNQGNNLLTGGQGNDYVEGGAGDDNYVFN 2210
Query: 311 APSYLYKIYRFE 322
+ +
Sbjct: 2211 RGDGQDTLNATD 2222
>gi|238785378|ref|ZP_04629365.1| RTX toxin and Ca2+-binding protein [Yersinia bercovieri ATCC 43970]
gi|238713705|gb|EEQ05730.1| RTX toxin and Ca2+-binding protein [Yersinia bercovieri ATCC 43970]
Length = 650
Score = 96.4 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 85/297 (28%), Gaps = 21/297 (7%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESW 250
G++I TI+ GDD +D T+ G + E
Sbjct: 187 NSGAGDDIISAGGGNDYITGGAGNDTIHGGQGDDTIDGDEGNDTIHGEQGDDTIYGGEGN 246
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+I G + N I + + GN+ + G + N+ G + G SG D +
Sbjct: 247 DTIHGGQGNNVIHGDDGDDVIYAEQGNNTIYGGNGNDTIHGGQGQYIIHGGSGDDII--H 304
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTAS 367
IY + +Y + + + + + Q + +
Sbjct: 305 GEQGQGTIYGNDGDDTIYVGAGRWGSIIKAGTGNDYIVGSIQSDKISGGEGNDTIFGGDG 364
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--------FDSYLYLGSYDDLRNVFGSDR 419
+ + G D+ +G D F + +L +F D
Sbjct: 365 ADTISGGAGTDIIHGGDEMDYLMGDDGNDYISGDAGGEHFSTGNHLFGGSGNDMIFAGDG 424
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
G + GRN L +++LI + G D + F +
Sbjct: 425 GDQIEGDGNNPKDNGRNNIGDDHLFGGKGNDELIGGRGNDFLAGGHGDDTYHFFVGD 481
Score = 96.0 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/336 (16%), Positives = 105/336 (31%), Gaps = 11/336 (3%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ ++G L I Y+ N +I + + GND + G + N+
Sbjct: 154 TKNTIILGENYRNQILGGSQDDIINTYDGNDSINSGAGDDIISAGGGNDYITGGAGNDTI 213
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-D 348
G+D DG G DT + IY E ++ + D + + +A
Sbjct: 214 HGGQGDDTIDGDEGNDTI--HGEQGDDTIYGGEGNDTIHGGQGNNVIHGDDGDDVIYAEQ 271
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ + G D+ + ++G D + GS
Sbjct: 272 GNNTIYGGNGNDTIHGGQGQYIIHGGSGDDIIHGEQGQGTIYGNDGDDTIYVGAGRWGSI 331
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRN---PDAFKALEYIASHEDLINAFADAPDLVQV 465
++ G+D + EG + + D+I+ + L+
Sbjct: 332 --IKAGTGNDYIVGSIQSDKISGGEGNDTIFGGDGADTISGGAGTDIIHGGDEMDYLMGD 389
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
+ + + G G + ++L+ GS +D+ F D G + GRN
Sbjct: 390 DGNDYIS-GDAGGEHFSTGNHLFGGSGNDMI--FAGDGGDQIEGDGNNPKDNGRNNIGDD 446
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
L +++LI + G D + F +
Sbjct: 447 HLFGGKGNDELIGGRGNDFLAGGHGDDTYHFFVGDG 482
Score = 88.7 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/352 (14%), Positives = 83/352 (23%), Gaps = 25/352 (7%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S + I N Y S+ + +D D G G I + I G
Sbjct: 151 SSSTKNTIILGEN-YRNQILGGSQDDIINTYDGNDSINSGAGDDIISAGGGNDYITGGAG 209
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G + G + + Y + + G D V
Sbjct: 210 NDTIHGGQGDDTIDGDEGNDTIHGEQGDDTIYGGEGNDTIHGGQGNNVIHG-DDGDDVIY 268
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNT 247
G N I+ GDD++ + I +
Sbjct: 269 AEQGNNTIYGGN---GNDTIHGGQGQYIIHGGSGDDIIHGEQGQGTIYGNDGDDTIYVGA 325
Query: 248 ESW-SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
W S I N I + + G GND + G + +G D+ G +D
Sbjct: 326 GRWGSIIKAGTGNDYIVGSIQSDKISGGEGNDTIFGGDGADTISGGAGTDIIHGGDEMD- 384
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANE----------HKQDFLSDVERLRFADQCIDSVNV 356
+ I N D +E + + N
Sbjct: 385 -YLMGDDGNDYISGDAGGEHFSTGNHLFGGSGNDMIFAGDGGDQIEG-DGNNPKDNGRNN 442
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
L ++LI G D + G + + G+
Sbjct: 443 IGDDHLFGGKGNDELIGGRGNDFLAGGHGDDTYHFFVGDGVNIINEESGGNN 494
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 78/313 (24%), Gaps = 55/313 (17%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
I S G + D G TI I G
Sbjct: 188 SGAGDDIISAGGGNDYITGGAGNDTIHGGQGDDTIDGDEGNDTIHGEQGDDTIYGGEGND 247
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYC-ATPMVSDIVAVQK 193
G ++G D D + + Y D++ Y DI+ ++
Sbjct: 248 TIHGGQGNNVIHGDDGDDVIYAEQGNNTIYGGNGNDTIHGGQGQYIIHGGSGDDIIHGEQ 307
Query: 194 IYGAPKGSLGNNIYKI-----------------------EVQQKDSPFIQTIYDSGGDDL 230
G G+ G++ + + TI+ G D
Sbjct: 308 GQGTIYGNDGDDTIYVGAGRWGSIIKAGTGNDYIVGSIQSDKISGGEGNDTIFGGDGADT 367
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES------VVGSSGNDVVI--- 281
+ GG I + + G + N I+ E + G SGND++
Sbjct: 368 I----SGGAGTDIIHGGDEMDYLMGDDGNDYISGDAGGEHFSTGNHLFGGSGNDMIFAGD 423
Query: 282 -----------------GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
N ++ F GND G G D Y + +
Sbjct: 424 GGDQIEGDGNNPKDNGRNNIGDDHLFGGKGNDELIGGRGNDFLAGGHGDDTYHFFVGDGV 483
Query: 325 IIVYDANEHKQDF 337
I+ + +
Sbjct: 484 NIINEESGGNNIL 496
>gi|325205831|gb|ADZ01284.1| iron-regulated protein FrpA [Neisseria meningitidis M04-240196]
Length = 1315
Score = 96.4 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 86/539 (15%), Positives = 157/539 (29%), Gaps = 71/539 (13%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 751 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 810
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 811 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQYYFQNDGSGAYRIDEIHFDNGK 870
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 871 VLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 926
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + + + G GND + G N+ +GND +G SG
Sbjct: 927 IYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 986
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT+ + +Y ++ A D +RF D +
Sbjct: 987 SDTYVFGEGFGQDTVYNYDYATGRKD-------------IIRFTDGITADML-----TFT 1028
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGA 421
++ + G +F G R +I FD+ G D+ V + +
Sbjct: 1029 REGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDN----GKVLDVATVKELVQQS 1084
Query: 422 AARHYITHGVKEG--RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ + G N Y A +DL+N A + + + G
Sbjct: 1085 TDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEG--- 1141
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
+ LY + +D+ N + L ++ LI
Sbjct: 1142 ----NDALYGYNGNDVLN----------------------GGEGNDHLNGEDGNDTLIGG 1175
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ +G D + FG G+ +N ++ D + G AA H+I G
Sbjct: 1176 AGNDYLEGGSGSDTYV-FGKGFGQDTVYN--YHVDKNSDTMHFKG--FKAADVHFIRSG 1229
>gi|11602643|emb|CAA85481.2| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 1705
Score = 96.4 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 72/497 (14%), Positives = 121/497 (24%), Gaps = 73/497 (14%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S D+ + G TI + LGL +G D
Sbjct: 1137 GSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 1196
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + Y A IVA + Y ++
Sbjct: 1197 SDDI-----------DGGAGLDTVDYSAMIHAGKIVAPHE-------------YGFGIEA 1232
Query: 214 KDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
S G D D G + + +++ G + T+
Sbjct: 1233 DLSEGWVRKAARRGMDYYDSVRSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGD 1292
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G GND++ G++ N+ + G+D +G +G D F + V
Sbjct: 1293 DLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVD 1352
Query: 329 --------------------------------DANEHKQDFLSDVERLRFADQCIDSVNV 356
+A D +S +E + +
Sbjct: 1353 YSQAGAHAGVATGRIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGD 1412
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
Q ++L + L G DV + GRD + + D N G
Sbjct: 1413 AQANVLRGAGGADVLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANA-G 1471
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ + GR DA +++ + A H N
Sbjct: 1472 NLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLGKG--FASLMDEPETSNVLRHIENAVGS 1529
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
V D + G + L A ++DL
Sbjct: 1530 VRDDVLI---------GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDL 1580
Query: 537 INAFADAPDLVQAGKDH 553
D L AG H
Sbjct: 1581 FGGQGDDTYLFGAGYGH 1597
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 93/374 (24%), Gaps = 38/374 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYN 141
+ T D D+ G G + + LG L +
Sbjct: 1270 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGND 1329
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++D + Y A+ +++D+ A + GS
Sbjct: 1330 WFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLG-ILADLGAGRVDKLGEAGS 1388
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + I G + + + G E +
Sbjct: 1389 SAYDTVSGIENVVGTELADRI-------------TGDAQANVLRGAGGADVLAGGEGDDV 1435
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------ 313
+ + + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 1436 LLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAG 1495
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ L +E + + + ++L A + L
Sbjct: 1496 AKGVFLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSG 1555
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G DV + G D DL G D Y + E
Sbjct: 1556 GAGDDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGAGYGHDTIYE 1602
Query: 434 GRNPDAFKALEYIA 447
+ A
Sbjct: 1603 SGGGHDTIRINAGA 1616
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/365 (11%), Positives = 73/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 1134 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 1193
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 1194 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMDYYDSV 1253
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
VE + Q + + + L G D+
Sbjct: 1254 RSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 1313
Query: 390 GLSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 1314 YGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLGILA 1373
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 1374 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 1431
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 1432 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGND 1481
Query: 564 SITFN 568
++ F+
Sbjct: 1482 TVDFS 1486
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 54/382 (14%), Positives = 102/382 (26%), Gaps = 63/382 (16%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA--- 131
+ + +F + + DV R G G T+ A G A
Sbjct: 1307 DAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGR 1366
Query: 132 LGLMHPGSYNGGYPV-YGVDNDYENDSFLTSVMSYFMP--QDSMMDASFGYCATPMVSDI 188
+GL G G D+ DA +D+
Sbjct: 1367 IGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 1426
Query: 189 VA----------------------VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
+A ++YG G++ + + +
Sbjct: 1427 LAGGEGDDVLLGGDGDDQLSGDAGRDRLYGE----AGDD-WFFQDAANAGNLLD---GGD 1478
Query: 227 GDDLLDLTLIGGV------KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
G+D +D + G ++ L S + E + + IE+ VGS +DV+
Sbjct: 1479 GNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRH---IENAVGSVRDDVL 1535
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
IG++ NV +GNDV G +G D + ++
Sbjct: 1536 IGDAGANVLNGLAGNDVLSGGAGDD--VLLGDEGSDLLSGDAGNDDLFGGQGDDTYLF-- 1591
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGRDITF 399
+I E ++ + G D + + G D
Sbjct: 1592 ------------GAGYGHDTIYESGGGHDTIRINAGADQLWFARQGNDLEIRILGTDDAL 1639
Query: 400 DS-YLYLGSYDDLRNVFGSDRG 420
Y + + + +++
Sbjct: 1640 TVHDWYRDADHRVEAIHAANQA 1661
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 47/176 (26%), Gaps = 29/176 (16%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVF-DGSSGL-DTFFYYAPSYLYKIYRFENAIIVY 328
V+G G+DVV+ N++ + +G + + G D+ A + + + N VY
Sbjct: 910 VIGGDGDDVVLANASRIHYDGGAGTNTVSYAALGRQDSITVSADGERFNVRKQLNNANVY 969
Query: 329 ---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ D L V+ + +
Sbjct: 970 REGVATQKTAYGKRTENVQYRHVELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDNF 1029
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L A + L G D + G D+ + D +
Sbjct: 1030 LAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDGGAGVDT 1085
>gi|325199969|gb|ADY95424.1| Iron-regulated protein frpC [Neisseria meningitidis H44/76]
Length = 1429
Score = 96.4 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 70/497 (14%), Positives = 132/497 (26%), Gaps = 71/497 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 865 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGR 924
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 925 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 984
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 985 VLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 1040
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 1041 IYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 1100
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 1101 SDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 1160
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 1161 VQYYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGSTLNGGLGD 1220
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D + + Y +G
Sbjct: 1221 DYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDALNGG 1271
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ L ++ LI + G D + EG ++ D
Sbjct: 1272 EGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG---EGFGQDTVYNYHVDKNSDTM- 1327
Query: 498 VFGSDRGAAARHYITHG 514
AA H+I G
Sbjct: 1328 -HFKGFKAADVHFIRSG 1343
>gi|329851779|ref|ZP_08266460.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328839628|gb|EGF89201.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1701
Score = 96.4 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 55/352 (15%), Positives = 103/352 (29%), Gaps = 39/352 (11%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
T E ++ + N + D G G +I +
Sbjct: 1338 TVIEDAVGGSGDDVLLGNSAANGLTGGNGNDDLSGRAGDDQLLGGSGNDSISGDAGDDLM 1397
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
D D+ + S + + + + +
Sbjct: 1398 ---------------------DGGTGYDTADYAAASGAVTVNLSLSGAAQVTGGAGTDTL 1436
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYI 243
V+V+ + G+ S I G+D +D + +
Sbjct: 1437 VSVENVTGSA----------FADNLTGSTSANQIDGGDGNDTIDAGGSSDVVNGQLGDDS 1486
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L ++ G E N T+ + +++ G +G+D + G S +V +GND DG +G
Sbjct: 1487 LLAGTGADTLDGGEGNDTLDGGSGNDTMAGGTGDDALTGGSGGDVLIGDAGNDALDGGTG 1546
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT Y + + + D L +E L ++ + +IL
Sbjct: 1547 TDTVDYGLATAGVSVSLSMPGLAQVTGGA-GTDTLVSIENLTGSEFDDFLIGSSGSNILM 1605
Query: 364 YTASYEDLIQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLRN 413
++ ++ G D + FGL+ G D D G DL
Sbjct: 1606 GGGGHDQIVGRGGNDGLTGGAGADDFVFGLASGADRVMDFNAGDGDQLDLSA 1657
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/348 (13%), Positives = 89/348 (25%), Gaps = 27/348 (7%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G + + + G +G+D ++G S N+ +G+D+ DG +G D
Sbjct: 1345 GGSGDDVLLGNSAANGLTGGNGNDDLSGRAGDDQLLGGSGNDSISGDAGDDLMDGGTGYD 1404
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T Y A S + + D L VE + L +
Sbjct: 1405 TADYAAASGAVTVNLSLSGAAQVTGGA-GTDTLVSVE---------NVTGSAFADNLTGS 1454
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRG 420
S + G D ++ G D D+ D L G+D
Sbjct: 1455 TSANQIDGGDGNDTIDAGGSSDVVNGQLGDDSLLAGTGADTLDGGEGNDTLDGGSGNDTM 1514
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
A G L A ++ L + S G
Sbjct: 1515 A-----GGTGDDALTGGSGGDVLIGDAGNDALDGGTGTDTVDYGLATAGVSVSLSMPGL- 1568
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYI--THGVKEGRNPDAFKALEYIASHEDLIN 538
+ + G+ D + G+ ++ + G + ++ L
Sbjct: 1569 ----AQVTGGAGTDTLVSIENLTGSEFDDFLIGSSGSNILMGGGGHDQIVGRGGNDGLTG 1624
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
+ + G + Y + G+D
Sbjct: 1625 GAGADDFVFGLASGADRVMDFNAGDGDQLDLSAYHAQATAVIYQSGAD 1672
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 64/503 (12%), Positives = 126/503 (25%), Gaps = 55/503 (10%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ N T D G G + + G Y
Sbjct: 597 LAGTGNSLANTLTGTDGGDALNGMAGGDTMVGGAGNDSYSVDTVNDVVTEVAGGGTDTVY 656
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
V G D + + + + + +F + +
Sbjct: 657 ASRSWVLGADLENLVLTGAARAGTGNSLANILTGTAFADTLDGGAGSDQLIGGL------ 710
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G++ YK++ + + + G D + N L + G
Sbjct: 711 --GDDSYKVDT---IADVVIEMSGEGLDVVTTTVDYTLGANIEVLRLSGAARRGT----- 760
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
G++ + + G ++++V G D G G D++ + +
Sbjct: 761 ------------GNALANSLFGTTSSDVLDGGGGADSLTGGKGNDSYLVDNAADVVIESA 808
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
E V A VERL A + +++ T ++ L +G D
Sbjct: 809 LEGTDTVTTA-VDGYVLSDQVERLVLAGAARHATGNGLDNLITGTTGHDVLDGGLGADSL 867
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY-ITHGVKEGRNPDA 439
+ + + L G D + G+ + + G + GR
Sbjct: 868 SGGAGNDTYYV--DSVADRTTELLAGGSDMVVASVDWTLGSNVENLTLVGGARVGRGNAL 925
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY----LYLGSYDDL 495
L +++ L + G D S ++ + + YD +
Sbjct: 926 DNVLVGTVANDSLYGGDGNDLLDGGAGGDRLSGGLGDDTYLIDSSTDVVVESAGAGYDTV 985
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIAS------------------HEDL 536
F A G LE + H+DL
Sbjct: 986 IATFDYVLQANVEVARLLGSGHTLTGNTGNNILEGGSGDDVLNGGGGDDLELGGDGHDDL 1045
Query: 537 INAFADAPDLVQAGKDHFSNFGY 559
++ +G D + G
Sbjct: 1046 VSTSGHDTLSGGSGDDVYLVDGG 1068
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 65/525 (12%), Positives = 131/525 (24%), Gaps = 38/525 (7%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
GY T + D FD D G G + E+ G + G
Sbjct: 503 TAGYGGTRKIDDTANSIYAFDGNDTLAAGGGNDLVDGGQGADEMAGNAGDDTYYVDDAGD 562
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
V + ++ + + +++ +G T +
Sbjct: 563 ATIEVAGEGLDEVVASVDWTLAANLENLTLKGWGLAGT--------------GNSLANTL 608
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS------IGGYEK 258
T+ G+D + + V + +G +
Sbjct: 609 TGTDGGDALNGMAGGDTMVGGAGNDSYSVDTVNDVVTEVAGGGTDTVYASRSWVLGADLE 668
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+ + + G+S +++ G + + +G+D G G D++ + +
Sbjct: 669 NLVLTGAARAGT--GNSLANILTGTAFADTLDGGAGSDQLIGGLGDDSYKVDTIA--DVV 724
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ +++E LR + + L T S + L G D
Sbjct: 725 IEMSGEGLDVVTTTVDYTLGANIEVLRLSGAARRGTGNALANSLFGTTSSDVLDGGGGAD 784
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
K + + D+ +S L R + +
Sbjct: 785 SLTGGKGNDSYLVDNAADVVIESALEGTDTVTTAVDGYVLSDQVERLVLAGAARHATGNG 844
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE---------GRFVTFDSYLYL 489
+ H+ L G D + + V L
Sbjct: 845 LDNLITGTTGHDVLDGGLGADSLSGGAGNDTYYVDSVADRTTELLAGGSDMVVASVDWTL 904
Query: 490 GSYDDLRNVFGSDRGAA-----ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
GS + + G R T D L+ A + L D
Sbjct: 905 GSNVENLTLVGGARVGRGNALDNVLVGTVANDSLYGGDGNDLLDGGAGGDRLSGGLGDDT 964
Query: 545 DLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSA 589
L+ + D ++ D L + ++ + GS +
Sbjct: 965 YLIDSSTDVVVESAGAGYDTVIATFDYVLQANVEVARLLGSGHTL 1009
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/322 (12%), Positives = 79/322 (24%), Gaps = 19/322 (5%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ +++ + T S+ GND + N++ G D
Sbjct: 488 QPDLNIYGTQSDDLMTAGYGGTRKIDDTANSIYAFDGNDTLAAGGGNDLVDGGQGADEMA 547
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G++G DT++ + +++E L +
Sbjct: 548 GNAGDDTYYVD--DAGDATIEVAGEGLDEVVASVDWTLAANLENLTLKGWGLAGTGNSLA 605
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+ L T + L + G D + + D+ G+D
Sbjct: 606 NTLTGTDGGDALNGMAGGDTMVGGAGNDSYSVDTVNDVV-----------TEVAGGGTDT 654
Query: 420 GAAARHYITHGVKEGRNPDAFK-ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
A+R ++ E A + L G D ++
Sbjct: 655 VYASRSWVLGADLENLVLTGAARAGTGNSLANILTGTAFADTLDGGAGSDQLIGGLGDDS 714
Query: 479 RFVTFDSYLYLGSYDD----LRNVFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASH 533
V + + + + + GA G +A +L S
Sbjct: 715 YKVDTIADVVIEMSGEGLDVVTTTVDYTLGANIEVLRLSGAARRGTGNALANSLFGTTSS 774
Query: 534 EDLINAFADAPDLVQAGKDHFS 555
+ L G D +
Sbjct: 775 DVLDGGGGADSLTGGKGNDSYL 796
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 51/343 (14%), Positives = 88/343 (25%), Gaps = 51/343 (14%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ S S D+ G G T A + L L
Sbjct: 1362 TGGNGNDDLSGRAGDDQLLGGSGNDSISGDAGDDLMDGGTGYDTADYAAASGAVTVNLSL 1421
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
GG + + + + +D G +D +
Sbjct: 1422 SGAAQVTGGAGTDTLVSVENVTGSAFADNLTGSTSANQIDGGDG-------NDTIDAGGS 1474
Query: 195 YGAPKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLN 246
G LG++ T+ G+D + D L GG + +
Sbjct: 1475 SDVVNGQLGDDSLLAGTGADTLDGGEGNDTLDGGSGNDTMAGGTGDDALTGGSGGDVLIG 1534
Query: 247 TESWSSIGGYEKNMTIAQH---------------------------TVIESVVGSSGNDV 279
++ G T+ IE++ GS +D
Sbjct: 1535 DAGNDALDGGTGTDTVDYGLATAGVSVSLSMPGLAQVTGGAGTDTLVSIENLTGSEFDDF 1594
Query: 280 VIGNSANNVFFESSG---------NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+IG+S +N+ G ND G +G D F + S ++ F
Sbjct: 1595 LIGSSGSNILMGGGGHDQIVGRGGNDGLTGGAGADDFVFGLASGADRVMDFNAGDGDQLD 1654
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ V AD ID +++ A+ L+
Sbjct: 1655 LSAYHAQATAVIYQSGADTVIDLGGGNSVTVISMLATDPGLLS 1697
Score = 44.4 bits (103), Expect = 0.056, Method: Composition-based stats.
Identities = 24/238 (10%), Positives = 51/238 (21%), Gaps = 3/238 (1%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + ++ + + +E + + L +DL
Sbjct: 1314 TVTLTSNSSNVVAAITGGLTEATRTVIEDAVGGSGDDVLLGNSAANGLTGGNGNDDLSGR 1373
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D G D+ Y + + + + + G
Sbjct: 1374 AGDDQLLGGSGNDSISGDAGDDLMDGGTGYDTADYAAASGAVTVNLSLSGAAQVTGGAGT 1433
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ + + A ++L + + G D G + L
Sbjct: 1434 DTLVSVENVTGSAFADNLTGSTSANQIDGGDGNDTIDAGGSSDVVNGQLGDDSLLAGTGA 1493
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G G AL + + LI + G D
Sbjct: 1494 DTLDGGEGNDTLD---GGSGNDTMAGGTGDDALTGGSGGDVLIGDAGNDALDGGTGTD 1548
>gi|149201402|ref|ZP_01878377.1| Hemolysin-type calcium-binding region [Roseovarius sp. TM1035]
gi|149145735|gb|EDM33761.1| Hemolysin-type calcium-binding region [Roseovarius sp. TM1035]
Length = 795
Score = 96.0 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/226 (17%), Positives = 69/226 (30%), Gaps = 15/226 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + P T+ + G+D L D G ++ ID +IGG +
Sbjct: 526 GDDLLQGGPEDDTLAGNAGNDTLRGNAGNDRLAGGDGRDQIDGGAG-HDNIGGGLGADRL 584
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++ G +G+D++ G + ++ GND+ +G +G D
Sbjct: 585 YGQAGDDTIGGGAGDDMLFGGNGADILSGGPGNDLLEGGAGNDRL----AGSFDHDTVRG 640
Query: 323 NAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+D L E L + + L + L G D
Sbjct: 641 GLGDDRIGGGPGRDLLDGGEGNDELGGGEADDTVLGGAGDDFLAGGGRNDLLDGGTGNDT 700
Query: 380 FESMKHFYEFGLSEGRDI-TFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ EG DI F+ + + FG DR
Sbjct: 701 LNAGAGHDRLIGGEGADIFVFNDFTVGERDVIVDFQFGEDRIRLTG 746
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 41/249 (16%), Positives = 68/249 (27%), Gaps = 41/249 (16%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
++ D G G+ I IG LG G + G D
Sbjct: 541 GNAGNDTLRGNAGNDRLAGGDGRDQIDGGAGHDNIGGGLGADRLYGQAGDDTIGGGAGDD 600
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ + P + +++ G D
Sbjct: 601 MLFGGNGADILSGGPGNDLLEGGAGNDRLAGSFD----------------------HDTV 638
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ I G DLLD E +GG E + T+ + + G
Sbjct: 639 RGGLGDDRIGGGPGRDLLD-------------GGEGNDELGGGEADDTVLGGAGDDFLAG 685
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
ND++ G + N+ +G+D G G D F + E +IV
Sbjct: 686 GGRNDLLDGGTGNDTLNAGAGHDRLIGGEGADIFVFN------DFTVGERDVIVDFQFGE 739
Query: 334 KQDFLSDVE 342
+ L+ +E
Sbjct: 740 DRIRLTGIE 748
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 70/280 (25%), Gaps = 34/280 (12%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + L+ + L A + L G+D + G G D
Sbjct: 525 AGDDLLQGGPEDDTLAGNAGNDTLRGNAGNDRLAGGDGRDQIDGGAGHDNIGGGLGAD-- 582
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
LY + DD D + +G LE A ++ L +F
Sbjct: 583 ---RLYGQAGDDTIGGGAGDDML----FGGNGADILSGGPGNDLLEGGAGNDRLAGSFDH 635
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
+G D G GR D D+L D G
Sbjct: 636 DTVRGGLGDDRI---GGGPGR----DLLDGGEGNDELGGGEADDTVL------------G 676
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDD 578
D F A ++ L + AG H G E FN + D
Sbjct: 677 GAGDDFLAGGG--RNDLLDGGTGNDTLNAGAG--HDRLIGGEGADIFVFN--DFTVGERD 730
Query: 579 LWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
+ F I GR L + + L
Sbjct: 731 VIVDFQFGEDRIRLTGIEGQGPTGRFLALDIQDTDAGAVL 770
Score = 53.6 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 52/358 (14%), Positives = 93/358 (25%), Gaps = 24/358 (6%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ +GG D+L + +DL G + I + +
Sbjct: 316 NGVSGLAAQVRAGGIDILVTAAGEAGLSLFRVDLGPLGLVLHGNAAR---IEGGMRDDLL 372
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
S GN V+ G ++ + G D G +G D F I F D +
Sbjct: 373 SRSGGNGVLDGAEGDDTLSDGPGADTLVGGTGADVFVLRGDGQRDVIADFTLGEDRLDLS 432
Query: 332 EHKQDFLSDVERLRFA---DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
L ++ +L F + +++ + + G + + HF
Sbjct: 433 L--WPMLRNLGQLAFTPTATGALLRFGLEEVDLRNAAGGAFVATDLPGL-LLPLVSHFDV 489
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+ + AA G + L A
Sbjct: 490 VLG-----PLQVAPPSVRLPPLPPPPPVLPEVAALLRVGGAGDDLLQGGPEDDTLAGNAG 544
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY-LYLGSYDDLRNVFGSDRGAAA 507
++ L + G+D + + LY + DD D
Sbjct: 545 NDTLRGNAGNDRLAGGDGRDQIDGGAGHDNIGGGLGADRLYGQAGDDTIGGGAGDDML-- 602
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
+ +G LE A ++ L +F G D G GR +
Sbjct: 603 --FGGNGADILSGGPGNDLLEGGAGNDRLAGSFDHDTVRGGLGDD---RIGGGPGRDL 655
>gi|34978374|sp|Q57506|CYAA_BORBR RecName: Full=Bifunctional hemolysin/adenylate cyclase; AltName:
Full=AC-HLY; AltName: Full=ACT; AltName: Full=Cyclolysin;
Contains: RecName: Full=Calmodulin-sensitive adenylate
cyclase; AltName: Full=ATP pyrophosphate-lyase; AltName:
Full=Adenylyl cyclase; Contains: RecName: Full=Hemolysin;
Flags: Precursor
Length = 1706
Score = 96.0 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 72/497 (14%), Positives = 121/497 (24%), Gaps = 73/497 (14%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S D+ + G TI + LGL +G D
Sbjct: 1138 GSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 1197
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + Y A IVA + Y ++
Sbjct: 1198 SDDI-----------DGGAGLDTVDYSAMIHAGKIVAPHE-------------YGFGIEA 1233
Query: 214 KDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
S G D D G + + +++ G + T+
Sbjct: 1234 DLSEGWVRKAARRGMDYYDSVRSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGD 1293
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G GND++ G++ N+ + G+D +G +G D F + V
Sbjct: 1294 DLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVD 1353
Query: 329 --------------------------------DANEHKQDFLSDVERLRFADQCIDSVNV 356
+A D +S +E + +
Sbjct: 1354 YSQAGAHAGVATGRIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGD 1413
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
Q ++L + L G DV + GRD + + D N G
Sbjct: 1414 AQANVLRGAGGADVLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANA-G 1472
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ + GR DA +++ + A H N
Sbjct: 1473 NLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLGKG--FASLMDEPETSNVLRHIENAVGS 1530
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
V D + G + L A ++DL
Sbjct: 1531 VRDDVLI---------GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDL 1581
Query: 537 INAFADAPDLVQAGKDH 553
D L AG H
Sbjct: 1582 FGGQGDDTYLFGAGYGH 1598
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 93/374 (24%), Gaps = 38/374 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYN 141
+ T D D+ G G + + LG L +
Sbjct: 1271 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGND 1330
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++D + Y A+ +++D+ A + GS
Sbjct: 1331 WFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLG-ILADLGAGRVDKLGEAGS 1389
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + I G + + + G E +
Sbjct: 1390 SAYDTVSGIENVVGTELADRI-------------TGDAQANVLRGAGGADVLAGGEGDDV 1436
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------ 313
+ + + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 1437 LLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAG 1496
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ L +E + + + ++L A + L
Sbjct: 1497 AKGVFLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSG 1556
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G DV + G D DL G D Y + E
Sbjct: 1557 GAGDDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGAGYGHDTIYE 1603
Query: 434 GRNPDAFKALEYIA 447
+ A
Sbjct: 1604 SGGGHDTIRINAGA 1617
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/365 (11%), Positives = 73/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 1135 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 1194
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 1195 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMDYYDSV 1254
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
VE + Q + + + L G D+
Sbjct: 1255 RSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 1314
Query: 390 GLSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 1315 YGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLGILA 1374
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 1375 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 1432
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 1433 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGND 1482
Query: 564 SITFN 568
++ F+
Sbjct: 1483 TVDFS 1487
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/382 (14%), Positives = 102/382 (26%), Gaps = 63/382 (16%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA--- 131
+ + +F + + DV R G G T+ A G A
Sbjct: 1308 DAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGR 1367
Query: 132 LGLMHPGSYNGGYPV-YGVDNDYENDSFLTSVMSYFMP--QDSMMDASFGYCATPMVSDI 188
+GL G G D+ DA +D+
Sbjct: 1368 IGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 1427
Query: 189 VA----------------------VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
+A ++YG G++ + + +
Sbjct: 1428 LAGGEGDDVLLGGDGDDQLSGDAGRDRLYGE----AGDD-WFFQDAANAGNLLD---GGD 1479
Query: 227 GDDLLDLTLIGGV------KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
G+D +D + G ++ L S + E + + IE+ VGS +DV+
Sbjct: 1480 GNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRH---IENAVGSVRDDVL 1536
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
IG++ NV +GNDV G +G D + ++
Sbjct: 1537 IGDAGANVLNGLAGNDVLSGGAGDD--VLLGDEGSDLLSGDAGNDDLFGGQGDDTYLF-- 1592
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGRDITF 399
+I E ++ + G D + + G D
Sbjct: 1593 ------------GAGYGHDTIYESGGGHDTIRINAGADQLWFARQGNDLEIRILGTDDAL 1640
Query: 400 DS-YLYLGSYDDLRNVFGSDRG 420
Y + + + +++
Sbjct: 1641 TVHDWYRDADHRVEAIHAANQA 1662
Score = 42.9 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 47/176 (26%), Gaps = 29/176 (16%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVF-DGSSGL-DTFFYYAPSYLYKIYRFENAIIVY 328
V+G G+DVV+ N++ + +G + + G D+ A + + + N VY
Sbjct: 911 VIGGDGDDVVLANASRIHYDGGAGTNTVSYAALGRQDSITVSADGERFNVRKQLNNANVY 970
Query: 329 ---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ D L V+ + +
Sbjct: 971 REGVATQKTAYGKRTENVQYRHVELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDNF 1030
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L A + L G D + G D+ + D +
Sbjct: 1031 LAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDGGAGVDT 1086
>gi|58040664|ref|YP_192628.1| putative glycosyl transferase [Gluconobacter oxydans 621H]
gi|58003078|gb|AAW61972.1| Putative glycosyl transferase [Gluconobacter oxydans 621H]
Length = 1030
Score = 96.0 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/229 (20%), Positives = 74/229 (32%), Gaps = 11/229 (4%)
Query: 383 MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA 439
+H+ G G FD YL D+R + HY G +
Sbjct: 56 EQHWKRKGARAGLSPNRFFDEEWYLRQNPDVREGISLGIFDSGFLHYCESGFRSRSPHWL 115
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRN 497
F Y + + DL G DH+ G +E R V FD ++ + R
Sbjct: 116 FSEENYFSCNPDLSPHVLA-SQGFCNGYDHYLAIGDQEHRKSHVFFDPEVFRAASMAERK 174
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+ G A+ R+ F Y+ + D+++A Q+ H+
Sbjct: 175 HYDFAIGDFAQFIRFSVAGRRRSSWYFDPQWYLERYPDVVDALES--GRFQSPLHHYLTN 232
Query: 558 GYEEGRSIT--FNPDLYLTSYDDLWNVFG-SDRSAAAQHYITHGMKEGR 603
G F+ Y Y D+ N+ +H+I G+ E R
Sbjct: 233 GNPTAYDPNPWFSEAFYAAQYPDVGNIVAHGGFRNGYEHFIRFGITEKR 281
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 61/214 (28%), Gaps = 10/214 (4%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVF 415
+ + + H+ E G R F Y DL
Sbjct: 74 FDEEWYLRQNPDVREGISLGIFDSGFLHYCESGFR-SRSPHWLFSEENYFSCNPDLSPHV 132
Query: 416 --GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
HY+ G +E R F E + D FS
Sbjct: 133 LASQGFCNGYDHYLAIGDQEHRKSHVFFDPEVFRAASMAERKHYDFAIGDFAQFIRFSVA 192
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIA 531
G FD YL Y D+ + S + HY+T+G +P+ F Y A
Sbjct: 193 GRRRS-SWYFDPQWYLERYPDVVDALESGRFQSPLHHYLTNGNPTAYDPNPWFSEAFYAA 251
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
+ D+ N A G +HF FG E R
Sbjct: 252 QYPDVGNIVAHGGFR--NGYEHFIRFGITEKRQP 283
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 71/218 (32%), Gaps = 24/218 (11%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAA----------ARHYITHGVKEGRNPD-AFKALEYIA 447
FD+ Y Y + G A +H+ G + G +P+ F Y+
Sbjct: 22 FDAEWYRTRYGLRLREEAKESGEAGELDLSDEGLEQHWKRKGARAGLSPNRFFDEEWYLR 81
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEE-GRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ D+ + + G H+ G F Y DL + +G
Sbjct: 82 QNPDVRE--GISLGIFDSGFLHYCESGFRSRSPHWLFSEENYFSCNPDLSPHVLASQGFC 139
Query: 507 --ARHYITHGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
HY+ G +E R F + A+ A D F F R
Sbjct: 140 NGYDHYLAIGDQEHRKSHVFFDPEVFRAA----SMAERKHYDFAIGDFAQFIRFSVAGRR 195
Query: 564 --SITFNPDLYLTSYDDLWNVFGSDRS-AAAQHYITHG 598
S F+P YL Y D+ + S R + HY+T+G
Sbjct: 196 RSSWYFDPQWYLERYPDVVDALESGRFQSPLHHYLTNG 233
>gi|332708288|ref|ZP_08428269.1| RTX toxins family Ca2+-binding protein [Lyngbya majuscula 3L]
gi|332352953|gb|EGJ32512.1| RTX toxins family Ca2+-binding protein [Lyngbya majuscula 3L]
Length = 2105
Score = 96.0 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 65/403 (16%), Positives = 117/403 (29%), Gaps = 22/403 (5%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D I AD + G G+ AL +G + L G G +
Sbjct: 1583 GDGGNDTLIGGVGADKFNGGEGEDWADYSEALSSVG--VDLASQGFRGEGTGDTFEKQNS 1640
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCA-TPMVSDIVA-------VQKIYGAPKGSLGNN 205
++ + Y + + + +D V + YG
Sbjct: 1641 QSTTENLKGSPYGDTFFGDIGNNDIDPDISSGETDFVDGREGDDLLIVNYGIRNDWGSGI 1700
Query: 206 IYKIEV-QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + D G L D ++ + T +I G TI
Sbjct: 1701 TGGFDSDNATSGYISRQRTDLNGQQLNDAISFFNIERSQIIGTIQSDNIQGGGGFDTIFA 1760
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY----YAPSYLYKIYR 320
+ + G +GND + + +++ +G DV DG G DT Y ++ Y+
Sbjct: 1761 GVGDDLISGGNGNDRIQADDGDDILIGGAGADVLDGGEGQDTASYENARFSGVYVDLEKS 1820
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
F+ + + ++ D L +E L + Q + L A ++L G D
Sbjct: 1821 FQEFVYLNPFSDAAGDQLISIENLHGSIYDDWLFGNNQANQLYGDAGNDNLTGKGGADTL 1880
Query: 381 ESMKHFYEFGLS---EGRDITFDSYLYLG---SYDDLRNVFGSDRGAAARHYITHGVKEG 434
+ S EG I ++ LG D L N+ +
Sbjct: 1881 DGGSGINTASYSNSLEGVRINLETGNILGGDAEGDTLINIQNITGSSQDDSLAGDSSSNN 1940
Query: 435 -RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
R + L+ +++ L+ G D
Sbjct: 1941 LRGLEGDDLLQGNGNNDTLLGGDGSDTLEGGSGNDVLKGTSNS 1983
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/372 (12%), Positives = 91/372 (24%), Gaps = 70/372 (18%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ I G + + + ++++ G+ G+D + G N+V GND F+G G +T
Sbjct: 1235 TFIKGGGNDDELFGGSGLDTLEGNDGDDFLSGGKGNDVLKGGKGNDFFEGGEGNNTIDGG 1294
Query: 311 APSYLYKIYR----------------FENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+ + I + D + +VE+ ++
Sbjct: 1295 KDDDGKDVDAISYANETEGITGKLAPDADGKIYVKRANGQTDTIINVEQFDLTNKDDVMT 1354
Query: 355 NVKQRS-ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD--------SYLYL 405
Q + +++ + + + G D E +
Sbjct: 1355 GTDQNNEVIDGLDGNDKIYGLGGDDFLIGGLGADLIDGGEEGKKGDGTSYIKGDRTSYIK 1414
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEG--------------------------RNPDA 439
G N F R + T G G N
Sbjct: 1415 GDGTSYLNSFAGVRIDLETGFATGGEATGDQLISIEHILATIHPDDLRGNEKANILNGSE 1474
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS--YLYLGSYDDLRN 497
+ D ++ KD S G V+ + D
Sbjct: 1475 GNDVIEGREGADQLDGGGVRGFFGSSDKDVLSYESSSTGIAVSLKDGKGTGGEANGDSIA 1534
Query: 498 VFGSDRGAAARHYITH-----------------GVKEGRNPDAFKALEYIASHEDLINAF 540
++ + Y + G E R + L ++ LI
Sbjct: 1535 FAFFEKTSEFSKYSSFENLTGSNQDDNKLEGDLGHNEIRGLEGNDNLYGDGGNDTLIGGV 1594
Query: 541 ADAPDLVQAGKD 552
G+D
Sbjct: 1595 GADKFNGGEGED 1606
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 69/567 (12%), Positives = 137/567 (24%), Gaps = 104/567 (18%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ D ++ G G + + L I H L +HP G
Sbjct: 1410 TSYIKGDGTSYLNSFAGVRIDLETGFATGGEATGDQLISIEHILATIHPDDLRGNEKANI 1469
Query: 149 VDNDYEND---------------------SFLTSVMSYFMPQDS------MMDASFGYCA 181
++ ND S V+SY + G
Sbjct: 1470 LNGSEGNDVIEGREGADQLDGGGVRGFFGSSDKDVLSYESSSTGIAVSLKDGKGTGGEAN 1529
Query: 182 TPMVS------------------------DIVAVQKIYGAPKGS---LGNNIY--KIEVQ 212
++ D ++ G + +N+Y
Sbjct: 1530 GDSIAFAFFEKTSEFSKYSSFENLTGSNQDDNKLEGDLGHNEIRGLEGNDNLYGDGGNDT 1589
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
G+D D + +DL ++ + G + + E++
Sbjct: 1590 LIGGVGADKFNGGEGEDWADYSEALSSVG-VDLASQGFRGEGTGDTFEKQNSQSTTENLK 1648
Query: 273 GSSGNDVVIGNSANNVFF---ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
GS D G+ NN S D DG G D +
Sbjct: 1649 GSPYGDTFFGDIGNNDIDPDISSGETDFVDGREGDDLLIVNYGIRNDWGSGITGGFDSDN 1708
Query: 330 ANE---------------HKQDFLSDVER-----------LRFADQCIDSVNVKQRSILE 363
A + ++ER ++ ++
Sbjct: 1709 ATSGYISRQRTDLNGQQLNDAISFFNIERSQIIGTIQSDNIQGGGGFDTIFAGVGDDLIS 1768
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSYDDLRNVF------- 415
+ + G D+ EG+D ++++ + G Y DL F
Sbjct: 1769 GGNGNDRIQADDGDDILIGGAGADVLDGGEGQDTASYENARFSGVYVDLEKSFQEFVYLN 1828
Query: 416 -----GSDRGAAARHYITHGVKEGRNPDAFKALEYI-ASHEDLINAFADAPDLVQVGKDH 469
D+ + + + + Y A +++L G +
Sbjct: 1829 PFSDAAGDQLISIENLHGSIYDDWLFGNNQANQLYGDAGNDNLTGKGGADTLDGGSGINT 1888
Query: 470 FSNFGCEEGRFVTFDSYLYL--GSYDDLRNVFGSDRGAAARH--YITHGVKEGRNPDAFK 525
S EG + ++ L + D + G++ R +
Sbjct: 1889 ASYSNSLEGVRINLETGNILGGDAEGDTLINIQNITGSSQDDSLAGDSSSNNLRGLEGDD 1948
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKD 552
L+ +++ L+ +G D
Sbjct: 1949 LLQGNGNNDTLLGGDGSDTLEGGSGND 1975
>gi|90417984|ref|ZP_01225896.1| possible hemolysin-type calcium-binding region [Aurantimonas
manganoxydans SI85-9A1]
gi|90337656|gb|EAS51307.1| possible hemolysin-type calcium-binding region [Aurantimonas
manganoxydans SI85-9A1]
Length = 845
Score = 96.0 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/290 (15%), Positives = 79/290 (27%), Gaps = 20/290 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ ++ G+D+L D TL G + + I G + N
Sbjct: 367 GNDRLVGGAGNDILWGGRGNDILFGGDGDDTLFGEQGDDLLYGDAGNDVIFGGDGNDEAH 426
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G GND + G +V G+D +G +G D A + +
Sbjct: 427 GGDGNDYIDGGVGNDRLFGEDGADVIHGGDGDDHIEGGAGADVLIGGAGADMID----GG 482
Query: 324 AIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
A + D L + L + +L + + G DV
Sbjct: 483 ADDDVLHGDDGGDQLFGGIGNDELHGGGGNDALDGGEGDDVLHGDDGDDTMFGASGNDVL 542
Query: 381 ESMKHFYEFGLSEGRDITFD----SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
EG D+ + G D+ + G D + + G E
Sbjct: 543 HGGAGNDAIHGGEGDDVAHGGAGADLIDGGEGHDVLHGNGGD----DQIFGDIGNDEVHG 598
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
A++ + L D + G D + +
Sbjct: 599 GAGADAIDGGEGDDILHGDDGDDYIIGAAGNDMLFDGAGVDTLEGGEGDD 648
Score = 93.7 bits (231), Expect = 8e-17, Method: Composition-based stats.
Identities = 56/324 (17%), Positives = 95/324 (29%), Gaps = 29/324 (8%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + + T I G N I + + G GND ++G + N++ + GND
Sbjct: 328 GTDGDDMLIGTPYADLIDGRGGNDMIYGRESDDILYGGDGNDRLVGGAGNDILWGGRGND 387
Query: 297 VFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFAD 348
+ G G DT F Y + I+ + + + + D +RL D
Sbjct: 388 ILFGGDGDDTLFGEQGDDLLYGDAGNDVIFGGDGNDEAHGGDGNDYIDGGVGNDRLFGED 447
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+E A + LI G D+ + +G D F G
Sbjct: 448 GADVIHGGDGDDHIEGGAGADVLIGGAGADMIDGGADDDVLHGDDGGDQLFG-----GIG 502
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
+D + G + G D + + ++ L + G D
Sbjct: 503 NDELHGGGGNDALD----GGEGDDVLHGDDGDDTMFGASGNDVLHGGAGNDAIHGGEGDD 558
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
D +D L G D+ + G E A++
Sbjct: 559 VAHGG-------AGADLIDGGEGHDVLHGNGGDDQI-----FGDIGNDEVHGGAGADAID 606
Query: 529 YIASHEDLINAFADAPDLVQAGKD 552
+ L D + AG D
Sbjct: 607 GGEGDDILHGDDGDDYIIGAAGND 630
Score = 87.1 bits (214), Expect = 8e-15, Method: Composition-based stats.
Identities = 48/327 (14%), Positives = 86/327 (26%), Gaps = 22/327 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + D D G + I G
Sbjct: 363 YGGDGNDRLVGGAGNDILWGGRGNDILFGGDGDDTLFGEQGDDLLYGDAGNDVIFGGDGN 422
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G + G + + + + D ++ G A ++ A
Sbjct: 423 DEAHGGDGNDYIDGGVGNDRLFGEDGADVIHGGDGDDHIEGGAG--ADVLIGGAGADMID 480
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
GA L + Q ++ GG+D LD E +
Sbjct: 481 GGADDDVLHGDD--GGDQLFGGIGNDELHGGGGNDALD-------------GGEGDDVLH 525
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + T+ + + + G +GND + G ++V +G D+ DG G D +
Sbjct: 526 GDDGDDTMFGASGNDVLHGGAGNDAIHGGEGDDVAHGGAGADLIDGGEGHD--VLHGNGG 583
Query: 315 LYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+I+ V+ D + L D + +L A + L
Sbjct: 584 DDQIFGDIGNDEVHGGAGADAIDGGEGDDILHGDDGDDYIIGAAGNDMLFDGAGVDTLEG 643
Query: 374 VIGQDVFE--SMKHFYEFGLSEGRDIT 398
G D + G D
Sbjct: 644 GEGDDCIALVADGETDTVYGGGGNDTL 670
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/330 (12%), Positives = 81/330 (24%), Gaps = 30/330 (9%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ D D G+G + + I G H G
Sbjct: 408 YGDAGNDVIFGGDGNDEAHGGDGNDYIDGGVGNDRLFGEDGADVIHGGDGDDHIEGGAGA 467
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ G D + + + G A+ G
Sbjct: 468 DVLIGGAGADMIDGGADDDVLHGDDGGDQLFGGIGNDELHGGGGNDALDGGEGDDVLHGD 527
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTE--------S 249
+ + + ++ G+D + D+ G + ID
Sbjct: 528 D----GDDTMFGASGNDVLHGGAGNDAIHGGEGDDVAHGGAGADLIDGGEGHDVLHGNGG 583
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
I G N + +++ G G+D++ G+ ++ ++GND+ +G+DT
Sbjct: 584 DDQIFGDIGNDEVHGGAGADAIDGGEGDDILHGDDGDDYIIGAAGNDMLFDGAGVDTL-- 641
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR---------- 359
I + D L E + A + V
Sbjct: 642 EGGEGDDCIALVADGETDTVYGGGGNDTLDLSEIVFDATINLPDGWVTIDGTREARLFEI 701
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + L+ ++ F
Sbjct: 702 ENIRGGHGNDRLVADDEVNIMVGGAGNDIF 731
Score = 39.4 bits (90), Expect = 1.8, Method: Composition-based stats.
Identities = 36/285 (12%), Positives = 65/285 (22%), Gaps = 71/285 (24%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ + D D GIG + + G +G
Sbjct: 472 GGAGADMIDGGADDDVLHGDDGGDQLFGGIGNDELHGGGGNDALDGGEGDDVLHGDDGDD 531
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
++G + + + D + G + GN
Sbjct: 532 TMFGASGNDVLHGGAGNDAIHGGEGDDVAHGGAG----------ADLIDGGEGHDVLHGN 581
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ Q ++ G D +D GG + I + I G N +
Sbjct: 582 ---GGDDQIFGDIGNDEVHGGAGADAID----GGEGDDILHGDDGDDYIIGAAGNDMLFD 634
Query: 265 HTVIESVVGSSGND-----------VVIGNSANNVFF----------------------- 290
++++ G G+D V G N+
Sbjct: 635 GAGVDTLEGGEGDDCIALVADGETDTVYGGGGNDTLDLSEIVFDATINLPDGWVTIDGTR 694
Query: 291 -----------ESSGND---------VFDGSSGLDTFFYYAPSYL 315
GND + G +G D F + + L
Sbjct: 695 EARLFEIENIRGGHGNDRLVADDEVNIMVGGAGNDIFVFRSLDAL 739
>gi|323139734|ref|ZP_08074772.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
gi|322395005|gb|EFX97568.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
Length = 992
Score = 95.6 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/288 (19%), Positives = 95/288 (32%), Gaps = 85/288 (29%)
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 443
F +E + D YL +Y D+ +A H+ +G KEGRNP + F L
Sbjct: 11 GFVNSSGAE--VLVVDEKFYLAAYPDVVAS----GISAHDHFHNYGWKEGRNPASCFHTL 64
Query: 444 EYIASHEDLINAFADA-------PDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
Y + + + + + + + FD Y Y
Sbjct: 65 YYAKKNMPGGQLSMNPLLHYAQLGKKTATAPKTPAEWLEIQKKEIAYLFDETFYKRQYGP 124
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHE------------------- 534
+ + HY+ G K+G NP + F +Y+A +
Sbjct: 125 MLSWLE-----PIDHYLESGWKQGFNPREDFDTQQYVALNSFLTNSDINPFYHFIVTAEN 179
Query: 535 -------------------------DLINAFA----------DAPDLVQA---GKDHFSN 556
+LI A A + PD+ +A H+ +
Sbjct: 180 SRTQAASSTQMGGDQESVAREAERMELITAIAPHFDARFYCDENPDIARAKVNPVSHYVD 239
Query: 557 FGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
+G++EGR+ T F + YL+S+ ++ HY+ HG + G
Sbjct: 240 YGWKEGRNPTAYFWTNYYLSSHPEVKLA----GVNPFHHYLRHGRQNG 283
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 77/281 (27%), Gaps = 88/281 (31%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSY------- 408
A + + I + HF+ +G EGR+ F + Y
Sbjct: 23 VDEKFYLAAYPDVVASGI-----SAHDHFHNYGWKEGRNPASCFHTLYYAKKNMPGGQLS 77
Query: 409 -----------------------------DDLRNVFGSDRGA-----------AARHYIT 428
++ +F HY+
Sbjct: 78 MNPLLHYAQLGKKTATAPKTPAEWLEIQKKEIAYLFDETFYKRQYGPMLSWLEPIDHYLE 137
Query: 429 HGVKEGRNP-DAFKALEYIASHEDLINAFADAP--------DLVQVGKDHFSNFGCEEGR 479
G K+G NP + F +Y+A + L N+ + + G +E
Sbjct: 138 SGWKQGFNPREDFDTQQYVALNSFLTNSDINPFYHFIVTAENSRTQAASSTQMGGDQESV 197
Query: 480 -------------FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FK 525
FD+ Y D+ + HY+ +G KEGRNP A F
Sbjct: 198 AREAERMELITAIAPHFDARFYCDENPDIARAKVN----PVSHYVDYGWKEGRNPTAYFW 253
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
Y++SH ++ H+ G + G
Sbjct: 254 TNYYLSSHPEVK-------LAGVNPFHHYLRHGRQNGLKPN 287
Score = 40.9 bits (94), Expect = 0.78, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 6/51 (11%)
Query: 554 FSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
F N E + + YL +Y D+ +A H+ +G KEGR
Sbjct: 12 FVNSSGAE--VLVVDEKFYLAAYPDVVA----SGISAHDHFHNYGWKEGRN 56
>gi|170750033|ref|YP_001756293.1| glycosyl transferase group 1 [Methylobacterium radiotolerans JCM
2831]
gi|170656555|gb|ACB25610.1| glycosyl transferase group 1 [Methylobacterium radiotolerans JCM
2831]
Length = 1044
Score = 95.6 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 60/265 (22%), Positives = 83/265 (31%), Gaps = 46/265 (17%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNV 414
Y Y D++ G D H+ G EGR F LYL S LR
Sbjct: 53 GLFDPAWYARRYPDVVGE-GIDPAV---HYAVHGGREGRWPHPLFHGDLYLDSVPGLRA- 107
Query: 415 FGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ HY+ G G P+ F Y + + F +
Sbjct: 108 ---EGTNPLLHYLDRGAAAGIRPNPLFDPDWYATRY-------LGGAEHRARAFSDFLSR 157
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG--RNPDAFKALEYIA 531
+ FD+ YL Y D R G+ A H+ G K+G RNP+ F ++
Sbjct: 158 TDTDP-SPQFDTAWYLSRYPDARAAGGN----ALSHFYETGRKQGYLRNPEEF---AGLS 209
Query: 532 SHEDLINAFA------------DAPDLVQAGKDHFSNFGYEE--GRSITFNPDLYLTSYD 577
H DLI +A +H+ G F+PD Y
Sbjct: 210 RHVDLIRRSGLFDAAFYRARCPEAETSGLEPLEHYVMAGGYRRYAPHPLFDPDWYAAQ-- 267
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEG 602
+D HY+ HG EG
Sbjct: 268 --SAAVRADSLNPLVHYLEHGAAEG 290
Score = 87.1 bits (214), Expect = 9e-15, Method: Composition-based stats.
Identities = 54/254 (21%), Positives = 76/254 (29%), Gaps = 46/254 (18%)
Query: 374 VIGQDVFESMKH----FYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+H F +F D + FD+ YL Y D R G+ A H+
Sbjct: 135 WYATRYLGGAEHRARAFSDFLSRTDTDPSPQFDTAWYLSRYPDARAAGGN----ALSHFY 190
Query: 428 THGVKEGR--NPDAFKALEYIASHEDLINAFA------------DAPDLVQVGKDHFSNF 473
G K+G NP+ F ++ H DLI +A +H+
Sbjct: 191 ETGRKQGYLRNPEEFA---GLSRHVDLIRRSGLFDAAFYRARCPEAETSGLEPLEHYVMA 247
Query: 474 GCEE--GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYI 530
G FD Y +D HY+ HG EG +P F Y
Sbjct: 248 GGYRRYAPHPLFDPDWYAAQ----SAAVRADSLNPLVHYLEHGAAEGLDPGPWFDTRWY- 302
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEE-GRSITFNPDLYLTSYDDLWNVFGSDRSA 589
F Q HF G S F+ Y Y + +
Sbjct: 303 ------TETFLGDDAAGQNPLAHFLADGGRTTSPSPRFDAPWYRARYPKVAAL----GLN 352
Query: 590 AAQHYITHGMKEGR 603
Y+T G++ GR
Sbjct: 353 PLIDYVTTGLEAGR 366
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 58/185 (31%), Gaps = 28/185 (15%)
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYL 489
+ + F Y + D++ D H++ G EGR F LYL
Sbjct: 47 RAVKESGLFDPAWYARRYPDVVGEGIDPAV-------HYAVHGGREGRWPHPLFHGDLYL 99
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQ 548
S LR HY+ G G P+ F Y + L A +
Sbjct: 100 DSVPGLRAEG----TNPLLHYLDRGAAAGIRPNPLFDPDWYATRY--LGGA-----EHRA 148
Query: 549 AGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
F + + S F+ YL+ Y D G A H+ G K+G +
Sbjct: 149 RAFSDFLSRTDTD-PSPQFDTAWYLSRYPDARAAGG----NALSHFYETGRKQG--YLRN 201
Query: 609 GMQFK 613
+F
Sbjct: 202 PEEFA 206
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 66/221 (29%), Gaps = 27/221 (12%)
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV--NVKQRSIL 362
DT +Y + + Y+ KQ +L + E + +D + + +
Sbjct: 167 DTAWYLSRYPDARAAGGNALSHFYETGR-KQGYLRNPEEFAGLSRHVDLIRRSGLFDAAF 225
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRG 420
E E ++H+ G FD Y +D
Sbjct: 226 YRARCPEAETSG-----LEPLEHYVMAGGYRRYAPHPLFDPDWYAAQ----SAAVRADSL 276
Query: 421 AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFS-NFGCEEG 478
HY+ HG EG +P F Y + A + HF + G
Sbjct: 277 NPLVHYLEHGAAEGLDPGPWFDTRWYTETFLGDDAAGQNP-------LAHFLADGGRTTS 329
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
FD+ Y Y + + + Y+T G++ GR
Sbjct: 330 PSPRFDAPWYRARYPKVAALGLN----PLIDYVTTGLEAGR 366
>gi|288963201|ref|YP_003453480.1| hypothetical protein AZL_f01760 [Azospirillum sp. B510]
gi|288915453|dbj|BAI76936.1| hypothetical protein AZL_f01760 [Azospirillum sp. B510]
Length = 1718
Score = 95.6 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 60/293 (20%), Positives = 91/293 (31%), Gaps = 44/293 (15%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYL 405
D V S L A Y ++ ++++ + G +EG FD+ Y
Sbjct: 40 DPLDTIVTTIANSGLFNLAHYSRERGTSFTNLSDAIRDYITGGDAEGLSPHPLFDAAYYR 99
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQ 464
D+ H+++ G EGR P F YI+ D A
Sbjct: 100 SCNPDMVAS----GLLPLLHFLSSGAAEGRAPHPLFDPTYYISQAGDAARA--------- 146
Query: 465 VGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
H+ G G FD Y D R +H+++ G EGR P
Sbjct: 147 NPLLHYLTTGIGAGLSPHPLFDPAHYQLQAGD------EARFGPLQHFLSSGAIEGRAPH 200
Query: 523 A-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDL 579
F YIA D +A P L H+ G G F+P Y+
Sbjct: 201 PLFNPAHYIAQAGDAAHA---NPLL------HYLTAGAGAGLSPHPLFDPAHYIAQ---- 247
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSF 632
+ + HY+T G G L + + +A+ L +
Sbjct: 248 --AGEAAHANPLLHYLTAGA--GAGLSPHPLFDPTYYISQAGDAARANPLLHY 296
Score = 90.6 bits (223), Expect = 7e-16, Method: Composition-based stats.
Identities = 72/387 (18%), Positives = 114/387 (29%), Gaps = 83/387 (21%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ +T +V+G + + + ++ SG D D T + +
Sbjct: 1 MAGDYPAIANTEAANVIGHWMSKKL-SRAPSSAVAGGSGQDPLDTIV---TTIANSGLFN 56
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
Y E + ++ +D+++ D S + Y + D++
Sbjct: 57 LAHYSRERGTSFTNLSDAIRDYITG------GDAEGLSPHPLF-DAAYYRSCNPDMVAS- 108
Query: 376 GQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+ HF G +EGR FD Y+ D HY+T G+
Sbjct: 109 ---GLLPLLHFLSSGAAEGRAPHPLFDPTYYISQAGDAARA------NPLLHYLTTGIGA 159
Query: 434 GRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLG 490
G +P F Y D HF + G EGR F+ Y+
Sbjct: 160 GLSPHPLFDPAHYQLQAGDEARFGP---------LQHFLSSGAIEGRAPHPLFNPAHYIA 210
Query: 491 SYDDLR------------------------------NVFGSDRGAAARHYITHGVKEGRN 520
D + HY+T G G +
Sbjct: 211 QAGDAAHANPLLHYLTAGAGAGLSPHPLFDPAHYIAQAGEAAHANPLLHYLTAGAGAGLS 270
Query: 521 PDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYD 577
P F YI+ D A P L H+ G G F+P Y +
Sbjct: 271 PHPLFDPTYYISQAGD---AARANPLL------HYLTTGIGAGLSPHPLFDPVHYQLQAE 321
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRA 604
D + FGS QH+++ G EGR
Sbjct: 322 DEAH-FGS-----LQHFLSSGAAEGRV 342
Score = 84.1 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 69/226 (30%), Gaps = 44/226 (19%)
Query: 385 HFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FK 441
H+ G G FD Y+ D HY+T G+ G +P F
Sbjct: 259 HYLTAGAGAGLSPHPLFDPTYYISQAGDAARA------NPLLHYLTTGIGAGLSPHPLFD 312
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVF 499
+ Y ED + HF + G EGR FD Y+
Sbjct: 313 PVHYQLQAEDEAHFG---------SLQHFLSSGAAEGRVPHPLFDPAHYIA------QAG 357
Query: 500 GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNF- 557
+ HY+T + G +P F YIA A P L H+
Sbjct: 358 EAAHANPLLHYLTTEIGAGLSPHPLFDPAHYIAQ---AGEAARANPLL------HYLTTE 408
Query: 558 -GYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
G F+P Y+ DD +HY+T G+ G
Sbjct: 409 IGAGLSPHPLFDPAYYIAQADDAARA------NPLRHYLTAGIAAG 448
Score = 83.7 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 71/238 (29%), Gaps = 40/238 (16%)
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L+Q + H+ G FD Y + + R RHY+T
Sbjct: 569 LVQAGDAARVNPLLHYLTAGAGLSPHPLFDPVHY------VAQAGETARANPLRHYLTAE 622
Query: 431 VKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYL 487
+ G +P F YIA D A H+ G G FD
Sbjct: 623 IGAGLSPHPLFDPAHYIAQAGDAARA---------NPLLHYLASGAARGLSPHPLFDPVC 673
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDL 546
Y + + R HY+T +P F A Y + + D++ +
Sbjct: 674 Y------VAAAGEAARANPLLHYVTAPPSVAPSPHPLFDAGYYRSRYADVLGS------- 720
Query: 547 VQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
H+ G EGR F+P Y+ D HY+T + G
Sbjct: 721 GLPLLVHYVRSGGSEGRQPYPLFDPAHYIAQAGDAARA------NPLLHYLTAEIGAG 772
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/281 (19%), Positives = 85/281 (30%), Gaps = 50/281 (17%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVF 415
Y A +D + ++H+ G++ G F+ YL D
Sbjct: 418 LFDPAYYIAQADDAARA------NPLRHYLTAGIAAGLSPHPLFNPAHYLAQAGDAARA- 470
Query: 416 GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
HY+T + G +P F Y+A D H+ G
Sbjct: 471 -----NPLLHYLTAEIGAGLSPHPLFDPAHYVAQAGDAARV---------NPLLHYLTAG 516
Query: 475 CEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIA 531
G FD YL D + R RHY+T G+ G +P F Y+
Sbjct: 517 IAAGLSPHPLFDPAHYLVQAGD------AARVDPLRHYLTAGIAAGLSPHPLFDPAHYLV 570
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA 591
D A P L H+ G F+P Y + + R+
Sbjct: 571 QAGD---AARVNPLL------HYLTAGAGLSPHPLFDPVHY------VAQAGETARANPL 615
Query: 592 QHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSF 632
+HY+T + G L + + +A+ L +
Sbjct: 616 RHYLTAEI--GAGLSPHPLFDPAHYIAQAGDAARANPLLHY 654
Score = 81.8 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/228 (21%), Positives = 65/228 (28%), Gaps = 42/228 (18%)
Query: 383 MKHF--YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA- 439
++H+ E G FD Y+ D HY+ G G +P
Sbjct: 615 LRHYLTAEIGAGLSPHPLFDPAHYIAQAGDAARA------NPLLHYLASGAARGLSPHPL 668
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSN--FGCEEGRFVTFDSYLYLGSYDDLRN 497
F + Y+A+ H+ FD+ Y Y D+
Sbjct: 669 FDPVCYVAAAG---------EAARANPLLHYVTAPPSVAPSPHPLFDAGYYRSRYADVLG 719
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFS- 555
HY+ G EGR P F YIA D A P L H+
Sbjct: 720 SG----LPLLVHYVRSGGSEGRQPYPLFDPAHYIAQAGD---AARANPLL------HYLT 766
Query: 556 -NFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
G F+P YL D V HY+T + G
Sbjct: 767 AEIGAGLSPHPLFDPAHYLAQVGDAARV------NPLLHYLTAEIGAG 808
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 70/255 (27%), Gaps = 49/255 (19%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
+ + + L + H+ G SEGR FD Y+ D
Sbjct: 703 PLFDAGYYRSRYADVLGSG-----LPLLVHYVRSGGSEGRQPYPLFDPAHYIAQAGDAAR 757
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
HY+T + G +P F Y+A D H+
Sbjct: 758 A------NPLLHYLTAEIGAGLSPHPLFDPAHYLAQVGDAARV---------NPLLHYLT 802
Query: 473 FGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEY 529
G FD YL D HY+T G+ G +P F Y
Sbjct: 803 AEIGAGLSPHPLFDPGHYLAQAGDAARA------NPLLHYLTAGIAVGLSPHPLFDPAHY 856
Query: 530 IASHEDLINAFADAPDLVQAGKDHFS--NFGYEEGRSITFNPDLYLTSYDDLWNVFGSDR 587
+ A P L H+ G F+P YLT + R
Sbjct: 857 LVQ---AGEAARVNPLL------HYLTAEIGAGLSPHPLFDPAHYLTQ------AGETAR 901
Query: 588 SAAAQHYITHGMKEG 602
+ HY+ G G
Sbjct: 902 ANPLLHYVASGAARG 916
Score = 80.6 bits (197), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 63/215 (29%), Gaps = 38/215 (17%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD+ Y Y D+ HY+ G EGR P F Y H +++
Sbjct: 993 PLFDAGYYRSRYPDVL----GSGLPLLVHYVRSGGSEGRQPHPLFDLDRYAVQHPEVLR- 1047
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
H+ G G FD Y + G HY+T
Sbjct: 1048 ------RKSPALLHYVTVGAAVGSSPCLLFDPAFY------VEQWDGPAPADPLSHYLTV 1095
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG---KDHFSN--FGYEEGRSITFN 568
G G +P Y+ P+ ++ H++ G F+
Sbjct: 1096 GAAAGLDPHPLFDSAYLR---------GVDPEAAESTRPLLVHYAERPAGSGLSPHPLFD 1146
Query: 569 PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
P Y Y DL G HY+ G EGR
Sbjct: 1147 PAYYRRVYVDLQGYPGD----LLVHYLIVGENEGR 1177
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 70/261 (26%), Gaps = 76/261 (29%)
Query: 385 HFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FK 441
H+ G++ G FD YL D R RHY+T G+ G +P F
Sbjct: 511 HYLTAGIAAGLSPHPLFDPAHYLVQAGDAA------RVDPLRHYLTAGIAAGLSPHPLFD 564
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
Y+ D H+ G FD Y + +
Sbjct: 565 PAHYLVQAGDAARV---------NPLLHYLTAGAGLSPHPLFDPVHY------VAQAGET 609
Query: 502 DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
R RHY+T + G +P F YIA D A P L H+ G
Sbjct: 610 ARANPLRHYLTAEIGAGLSPHPLFDPAHYIAQAGD---AARANPLL------HYLASGAA 660
Query: 561 EG--------------------------------------RSITFNPDLYLTSYDDLWNV 582
G F+ Y + Y D+
Sbjct: 661 RGLSPHPLFDPVCYVAAAGEAARANPLLHYVTAPPSVAPSPHPLFDAGYYRSRYADVL-- 718
Query: 583 FGSDRSAAAQHYITHGMKEGR 603
HY+ G EGR
Sbjct: 719 --GSGLPLLVHYVRSGGSEGR 737
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 66/226 (29%), Gaps = 40/226 (17%)
Query: 385 HFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FK 441
H+ G + G FD Y+ + HY+ G +G +P F
Sbjct: 907 HYVASGAARGLSPHLLFDPACYM------AAAGEAAWANPLLHYVASGAAQGLSPHPLFD 960
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSN--FGCEEGRFVTFDSYLYLGSYDDLRNVF 499
Y+A+ H+ FD+ Y Y D+
Sbjct: 961 PACYVAAAG---------EAARANPLLHYVTAPPSVAPSPHPLFDAGYYRSRYPDVLGSG 1011
Query: 500 GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
HY+ G EGR P F Y H +++ H+ G
Sbjct: 1012 ----LPLLVHYVRSGGSEGRQPHPLFDLDRYAVQHPEVLR-------RKSPALLHYVTVG 1060
Query: 559 YEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
G S F+P Y+ +D G + HY+T G G
Sbjct: 1061 AAVGSSPCLLFDPAFYVEQWD------GPAPADPLSHYLTVGAAAG 1100
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/288 (18%), Positives = 76/288 (26%), Gaps = 70/288 (24%)
Query: 382 SMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
++ H+ G + G FD Y+ +D HY+T G G +P
Sbjct: 1052 ALLHYVTVGAAVGSSPCLLFDPAFYVEQWDGPAPA------DPLSHYLTVGAAAGLDPHP 1105
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSN--FGCEEGRFVTFDSYLYLGSYDDLRN 497
Y+ +A + + H++ G FD Y Y DL+
Sbjct: 1106 LFDSAYLR------GVDPEAAESTRPLLVHYAERPAGSGLSPHPLFDPAYYRRVYVDLQG 1159
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
G HY+ G EGR P F L Y + P H+
Sbjct: 1160 YPGD----LLVHYLIVGENEGRKPHPLFDPLFYRQQ--------SAGPLTPANALVHYLV 1207
Query: 557 FGYEEG--RSITFNPDLY----------------------------------LTSYDDLW 580
G G S F+ Y L
Sbjct: 1208 EGAGRGLDPSPLFSTRFYQEHGQEQRPVPTTLRGRARSNPLADYVMRGARRNLAPNPCFD 1267
Query: 581 NVFGSDR-----SAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
VF + + S HY+ G EG Q +E R
Sbjct: 1268 PVFYTAQLPVRPSDPLVHYLETGADEGHDPHPDFDQAYYRAGSAEPER 1315
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 73/246 (29%), Gaps = 45/246 (18%)
Query: 376 GQDVFESMK------HFYE--FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
G D + H+ E G FD Y Y DL+ G HY+
Sbjct: 1114 GVDPEAAESTRPLLVHYAERPAGSGLSPHPLFDPAYYRRVYVDLQGYPGD----LLVHYL 1169
Query: 428 THGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FD 484
G EGR P F L Y P H+ G G + F
Sbjct: 1170 IVGENEGRKPHPLFDPLFYRQQSA--------GPLTPANALVHYLVEGAGRGLDPSPLFS 1221
Query: 485 SYLYLGSYDDLRNVFGSDRGAA----ARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 539
+ Y + R V + RG A Y+ G + P+ F + Y A +
Sbjct: 1222 TRFYQEHGQEQRPVPTTLRGRARSNPLADYVMRGARRNLAPNPCFDPVFYTAQ----LPV 1277
Query: 540 FADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
P + H+ G +EG F+ Y + + +HY+
Sbjct: 1278 RPSDPLV------HYLETGADEGHDPHPDFDQAYYRAGSAEPERIG-----NPLEHYLLT 1326
Query: 598 GMKEGR 603
G GR
Sbjct: 1327 GRSAGR 1332
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 61/221 (27%), Gaps = 33/221 (14%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVF 415
Y Y DL G + + H+ G +EGR FD Y +
Sbjct: 1144 LFDPAYYRRVYVDLQGYPG----DLLVHYLIVGENEGRKPHPLFDPLFYRQQ-----SAG 1194
Query: 416 GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD-APDLVQVGKDHFSNF 473
A HY+ G G +P F Y ++ +
Sbjct: 1195 PLTPANALVHYLVEGAGRGLDPSPLFSTRFYQEHGQEQRPVPTTLRGRARSNPLADYVMR 1254
Query: 474 GCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYI 530
G FD Y + HY+ G EG +P F Y
Sbjct: 1255 GARRNLAPNPCFDPVFYTAQLPVRPS-------DPLVHYLETGADEGHDPHPDFDQAYYR 1307
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNP 569
A + P+ + +H+ G GR + F+P
Sbjct: 1308 AGSAE--------PERIGNPLEHYLLTGRSAGRRPSPLFDP 1340
>gi|284052786|ref|ZP_06382996.1| hemolysin-type calcium-binding region [Arthrospira platensis str.
Paraca]
Length = 635
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/290 (16%), Positives = 83/290 (28%), Gaps = 8/290 (2%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+G +G + P ++ G+D++D GG N L E SI
Sbjct: 214 FGGNDTLVG---VGGRNILEGGPGNDSLVGGSGNDVID----GGEGNDTLLGNEGNDSIF 266
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +I + I S+ G G+D +IG N+ GND G +G DT +
Sbjct: 267 GGPGNDSIIGGSGINSLFGEGGDDTIIGGDDGNLLSGGVGNDSLTGGTGNDTI-FGGDGD 325
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
I + + D + + ++ + + + + ++
Sbjct: 326 DTIITERGDNQLFGDDGDDFIWGGIGRDLIQGGPGNDTLIGGSGNNTIFGGLGNDSIVGG 385
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D + S G + F N + Y G
Sbjct: 386 KGDDTLFGGEGNDTIEGSAGDNSIFGGAGNDSIIAGPGNDTVFAGPGNDQVYGGDGNNLI 445
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
L + + + G + F EG + D
Sbjct: 446 FGDSGNDTLYGGSGDDTISGGAGSDLLTGDSGNNVFYYLNPGEGVDIITD 495
Score = 84.1 bits (206), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/289 (15%), Positives = 90/289 (31%), Gaps = 24/289 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + + I GG+D L + + + G N ++ + +
Sbjct: 199 DDNIVGTALSEYIQGFGGNDTL-------------VGVGGRNILEGGPGNDSLVGGSGND 245
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND ++GN N+ F GND G SG+++ + I + ++
Sbjct: 246 VIDGGEGNDTLLGNEGNDSIFGGPGNDSIIGGSGINSL-FGEGGDDTIIGGDDGNLLSGG 304
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + + D + + + L + + IG+D+ +
Sbjct: 305 VGNDSLTGGTGNDTIFGGDGDDTIITERGDNQLFGDDGDDFIWGGIGRDLIQGGPGNDTL 364
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G + F G +D D + G ++ A +
Sbjct: 365 IGGSGNNTIFG-----GLGNDSIVGGKGDDTL----FGGEGNDTIEGSAGDNSIFGGAGN 415
Query: 450 EDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ +I + G D + G + + LY GS DD +
Sbjct: 416 DSIIAGPGNDTVFAGPGNDQVYGGDGNNLIFGDSGNDTLYGGSGDDTIS 464
>gi|325206566|gb|ADZ02019.1| iron-regulated protein FrpA [Neisseria meningitidis M04-240196]
Length = 1302
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 86/539 (15%), Positives = 157/539 (29%), Gaps = 71/539 (13%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 738 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 797
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 798 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQYYFQNDGSGAYRIDEIHFDNGK 857
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 858 VLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 913
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + + + G GND + G N+ +GND +G SG
Sbjct: 914 IYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 973
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT+ + +Y ++ A D +RF D +
Sbjct: 974 SDTYVFGKGFGQDTVYNYDYATGRKD-------------IIRFTDGITADML-----TFT 1015
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGA 421
++ + G +F G R +I FD+ G D+ V + +
Sbjct: 1016 REGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDN----GKVLDVATVKELVQQS 1071
Query: 422 AARHYITHGVKEG--RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ + G N Y A +DL+N A + + + G
Sbjct: 1072 TDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEG--- 1128
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
+ LY + +D+ N + L ++ LI
Sbjct: 1129 ----NDALYGYNGNDVLN----------------------GGEGNDHLNGEDGNDTLIGG 1162
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ +G D + FG G+ +N ++ D + G AA H+I G
Sbjct: 1163 AGNDYLEGGSGSDTYV-FGKGFGQDTVYN--YHVDKNSDTMHFKG--FKAADVHFIRSG 1216
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 47/316 (14%), Positives = 86/316 (27%), Gaps = 48/316 (15%)
Query: 273 GSSGNDVV----IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
G+ +D++ G++ N + + GND G +G D + +
Sbjct: 730 GTQADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGND-----------YLEGGSGSDTYV 778
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI--QVIGQDVFESMKHF 386
QD + + + I + +L +T L+ G +F
Sbjct: 779 FGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQYYF 838
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G +Y + D V T G + L
Sbjct: 839 QNDGSG--------AYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGG 890
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ L A D G + +Y G+ +D + +
Sbjct: 891 LGDDYLYGADGDDLLNGDAG-----------------NDSIYSGNGNDTLDGGEGNDAL- 932
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
Y +G + L ++ LI + +G D + FG G+
Sbjct: 933 ---YGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV-FGKGFGQDTV 988
Query: 567 FNPDLYLTSYDDLWNV 582
+N D Y T D+
Sbjct: 989 YNYD-YATGRKDIIRF 1003
>gi|161869517|ref|YP_001598684.1| iron-regulated protein FrpA, putative [Neisseria meningitidis 053442]
gi|161870279|ref|YP_001599449.1| iron-regulated protein FrpA, putative [Neisseria meningitidis 053442]
gi|161595070|gb|ABX72730.1| iron-regulated protein FrpA, putative [Neisseria meningitidis 053442]
gi|161595832|gb|ABX73492.1| iron-regulated protein FrpA, putative [Neisseria meningitidis 053442]
Length = 1302
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 70/497 (14%), Positives = 130/497 (26%), Gaps = 71/497 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 738 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 797
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 798 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 857
Query: 188 --IVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y +Y + GDDLL+ G N
Sbjct: 858 VLDVATVKELVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDAGNDS 913
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + + + G GND + G N+ +GND +G SG
Sbjct: 914 IYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 973
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 974 SDTYVFGEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVT 1033
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 1034 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGD 1093
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D + + Y +G
Sbjct: 1094 DYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDVLNGG 1144
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ L ++ LI + G D + EG ++ D
Sbjct: 1145 EGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG---EGFGQDTVYNYHVDKNSDTM- 1200
Query: 498 VFGSDRGAAARHYITHG 514
AA H+I G
Sbjct: 1201 -HFKGFKAADVHFIRSG 1216
>gi|260557565|ref|ZP_05829780.1| hemolysin-type calcium-binding region [Acinetobacter baumannii ATCC
19606]
gi|260409191|gb|EEX02494.1| hemolysin-type calcium-binding region [Acinetobacter baumannii ATCC
19606]
Length = 2890
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/322 (15%), Positives = 89/322 (27%), Gaps = 13/322 (4%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+I G T+ + +++ G +GND++ G + N+ +GND G G DT+
Sbjct: 2456 QNQTINGTSNADTLYGASGNDTLTGQAGNDILYGQAGNDTLNGGTGNDTMYGGKGDDTYI 2515
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTAS 367
+ + I N + L++VE L I+ +++ ++
Sbjct: 2516 VDSTA--DVISESVNEGTDIVQSSVTYTLLNNVENLTLTGTTAINGTGNALNNVIVGNSA 2573
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
L +G D + G D G G D ++ Y
Sbjct: 2574 INTLTGGVGDDYLNGGVGADKLLGGIGNDSYVIDN--TGDIVTENAGEGIDTVLSSITYT 2631
Query: 428 THGVKEGRN--PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
E A + L+ A VG D+ + +
Sbjct: 2632 LGNNLENLTLIGSTAINGTGNALNNVLVGNSAINTLTAGVGDDYLDGGAGADKLLGGIGN 2691
Query: 486 YLYLGSYDDLR----NVFGSDRGAAARHYITHGVKEGRNPDAFKALE--YIASHEDLINA 539
Y+ G D ++ Y E A+ + L
Sbjct: 2692 DTYVIDNTGDIVTENAGEGIDTVLSSITYTLSSNLENLTLTGSTAINATGNTLNNTLTGN 2751
Query: 540 FADAPDLVQAGKDHFSNFGYEE 561
AG D G +
Sbjct: 2752 SGVNALNGGAGNDILDGQGGND 2773
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 82/286 (28%), Gaps = 55/286 (19%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G+D L +GG N E + N I T
Sbjct: 1371 GDDVIDSGEGNDQLIGGTGNDRL----LGGEGNDQLQGGEGDDYLEASNGNDFIEGGTGN 1426
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL---------DTFFYYAPSYLYKIY 319
+ ++G SG D + GN ++ + GND+ G G D + + Y I
Sbjct: 1427 DQLIGGSGEDSLYGNDGDDHLYGGDGNDILSGGQGNNILEGGNGEDEYVFDILGYNNVIN 1486
Query: 320 RFENAIIVYDANEHKQDFLS-------------------------DVERLRFADQC--ID 352
+ +++ + + + L +++ ++F+D +
Sbjct: 1487 DTDASVLRFLSVSSENIKLEIVGNNLNIFYGVDSSVTITDFILNYNIKEIQFSDTVWYPE 1546
Query: 353 SVNVKQRSILEYTASYEDLIQV----------IGQDVFESMKHFYEFGLSEGRDITFDSY 402
++ K + + + ++ G D G D D
Sbjct: 1547 DLSQKINFLHNGSDGNDIIVGNPYFNNTVYSKNGDDAIYGGSGVDYIYGGNGNDAIVDPG 1606
Query: 403 L----YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
Y G DD + Y ++ GRN F +
Sbjct: 1607 NIGFLYGGEGDDNLIGNNNSEFYGGEGYDSY-QVNGRNTKIFDSDF 1651
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 71/270 (26%), Gaps = 21/270 (7%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+++ + D G G I G G D
Sbjct: 905 SGDGINIDVQYHGDDTVSGGNGNDLIWGE----------GGSDTIYGGEGEDYIEGDETS 954
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ + + Y + + G D IYG + + Y
Sbjct: 955 IHIQYHKDDLLYGGEGNDTIFGDGGRDIIYGGKD---NDYIYG--DSNQIDIQYHNNDTL 1009
Query: 214 KDSPFIQTIYDSGGDDLL---DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
I GG D++ D + + + G +++ ++
Sbjct: 1010 YGDAGNDNIRGDGGSDIIYGGDGDDFLVADVINNRAFDGDDQLYGGNGKDSLSGFDGNDT 1069
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +G+D++ G ++ F + GND G G D + K+ Y
Sbjct: 1070 LDGGAGDDIIFGGKGDDYFISNEGNDQLSGGEGNDIYHIQVRDSEVKVLDSSGENHYYLK 1129
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
LS++ + + +
Sbjct: 1130 GSFN---LSNINIYWYNNAVSIISPTTSQD 1156
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 46/349 (13%), Positives = 89/349 (25%), Gaps = 27/349 (7%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
GG+ N I L + + G + I + + G D++ G + G+
Sbjct: 681 YGGIGNDIILGSSDTDFLYGAVGDDAIYGMDGKDYLYGGENKDILYGGDGADQIIGGQGD 740
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G D + + + ++ + E K + +
Sbjct: 741 DELTGGLEGDELYGGDGDDIIQADLNDSIDTLAPPVEPKTYSRFGHDLVYGGAGKDQIWG 800
Query: 356 VKQRSILEY-----------------TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + L G D G D+
Sbjct: 801 NLGSDEIYGDDDDDQIAGDHPNLAGDIHGDDYLYGGNGNDQIVGDGGKDIIQGGNGNDLI 860
Query: 399 F-DSYLYLGSYDDLRNVFGSDRGA-----AARHYITHGVKEGRNPDAFKALEYIASHEDL 452
F D+ G Y N+ G+D I G E R ++ +D
Sbjct: 861 FGDNSELDGKYHAEDNIEGNDGNDEIWGQGGNDTINGGDGEDRISGDGINIDVQYHGDDT 920
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
++ + G G E ++ +++ + D G +
Sbjct: 921 VSGGNGNDLIWGEGGSDTIYGGEGEDYIEGDETSIHIQYHKDDLLYGGEGNDTI---FGD 977
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
G + Y S++ I + AG D+ G +
Sbjct: 978 GGRDIIYGGKDNDYI-YGDSNQIDIQYHNNDTLYGDAGNDNIRGDGGSD 1025
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 52/224 (23%), Gaps = 19/224 (8%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
I N+ + G+D + G+ + + +GND+ G G D
Sbjct: 1271 GDLVDIQQIRNNVISNGQYQADEYHLLGGDDQISGSDIGDTIYGGTGNDIIKGLEGSDQL 1330
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
F + + ++ DF+ E LE
Sbjct: 1331 F-------------GDEGDDWLDGSYENDFIYGGE------GNDQLFGGDGEDQLEGGNG 1371
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ + G D EG D N F +
Sbjct: 1372 DDVIDSGEGNDQLIGGTGNDRLLGGEGNDQLQGGEGDDYLEASNGNDFIEGGTGNDQLIG 1431
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
G D L ++ L + G+D +
Sbjct: 1432 GSGEDSLYGNDGDDHLYGGDGNDILSGGQGNNILEGGNGEDEYV 1475
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 56/206 (27%), Gaps = 22/206 (10%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-------IDLNTESWS---SIGGYEKNMTI 262
D I I G+D++ I+L + + G E + I
Sbjct: 1844 TPDVFAIDKISGGAGNDVIYTYDPLSNNQISNSPYLNINLARNIYDIKDVVYGGEGDDYI 1903
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNV---FFESSGNDVF---------DGSSGLDTFFYY 310
G GND+++ S ++ + GND DG +G D
Sbjct: 1904 YLGNQKTEAYGDDGNDIIVSYSLSSNIQFLYGGDGNDTLKAGDGGAYLDGGAGTDHLVGG 1963
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + + + +S L ++ Q + S
Sbjct: 1964 SGDDTFIVDEQDTYEENDPNGGYDTIHISQNIDLSLGYLEAVTLLGSQNLSIYGNTSDNK 2023
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRD 396
LI G + + G D
Sbjct: 2024 LIGNAGNNYIDGRAGSDYMQGGLGND 2049
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L + S + G + + +I +++ G S +D + G N+ GND+ DG G
Sbjct: 324 LTQKGISIVSG-DGDDSITGTKYSDALYGGSDDDSLNGAEDNDYLNGGVGNDILDGGEGD 382
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
D + Y +YD + + Q + D+
Sbjct: 383 DNLVDEKGNDTYIFNGNFGKDSIYDLDGNGQIKIDDI 419
>gi|257092096|ref|YP_003165737.1| Hemolysin-type calcium-binding domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044620|gb|ACV33808.1| Hemolysin-type calcium binding domain protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 3488
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 64/418 (15%), Positives = 110/418 (26%), Gaps = 22/418 (5%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
R ++E D+ G I A A+ + G+ G V G
Sbjct: 957 FVAGGTGRDYIEGGAGGDDLLAGGDADDVIFGDLAA---TLAVQIREAGNNEPGDLVSGQ 1013
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ +S + Y D + G D +YG +
Sbjct: 1014 GGNDALYGSSSSDLIYGGAGDDFLGGLGGDDFLLGDVDF----FLYGVWDVRRDGLNFIF 1069
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ Q S Y G G N + + + + G N I + +
Sbjct: 1070 DFTQILSSSRGDQYQEG---------PAGSGNDVIMGDKGNDAAWGGAGNDYIDGGSDND 1120
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + G + + +D +G +G DT +++ ++
Sbjct: 1121 TLRGGDGNDRLKGGDGEDFLSGGADDDTLEGDAGNDTLIGDG--GGDELHGAAGNDELHG 1178
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+RL L+ A ++DL DV + +
Sbjct: 1179 DTGDALVTEQGDDRLFGDAGDDYMRGYGGNDTLDGGAGHDDLSGGGNDDVLDGGEGNDTL 1238
Query: 390 GLSEGRDITF--DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
+G D YL S D + G A R G L
Sbjct: 1239 FGDDGLDTLLGGTGTDYLDSGADDDLLDGGSGNDALR--GGDGDDLLDGGSGSDGLRGGD 1296
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ LI G D + + R + + D VF +
Sbjct: 1297 GADTLIGGTDTDYLEGGAGDDIYLFAAGDSPRDADGFVEYVVDAEGDNTIVFSNATPT 1354
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 66/449 (14%), Positives = 124/449 (27%), Gaps = 37/449 (8%)
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
GL Y G D D NDS + + + A + + +A +
Sbjct: 2829 GLGDDIYYLGAGDRVVEDADQGNDSVYGYATEHTLAANVEHLFLAVATAATLTGNDLANR 2888
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS- 251
A L T+ GDD + + + D + +
Sbjct: 2889 LRGNAGDDRLAG--LAGNDTLDGGLGADTLIGGTGDDSYTVDNL-ADAIHEDADAGFDTV 2945
Query: 252 ------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIG--NSANNVFFESSGNDVFDGSSG 303
++G + + + + T I+ G++ + + G NSA N+ G+D++ +G
Sbjct: 2946 YSSVTWTLGEHLERLYLTGGTAID-ATGNARANTLYGHANSAVNILSGGLGDDIYYLGAG 3004
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D A +Y + + + EH ++ L D L
Sbjct: 3005 -DRVVEDADQGNDSVYGYGSEHTLAANVEHLFLAVATAATLTGNDLANRLRGNAGDDRLA 3063
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLS-------EGRDITFDSYLYLGSY-------- 408
A + L +G D + + E D FD+ ++
Sbjct: 3064 GLAGNDTLDGGLGADTLIGGTGDDSYTVDNLADAIHEDADAGFDTVYSSVTWTLGEHLER 3123
Query: 409 -----DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
+ G+ R + V A + +A +
Sbjct: 3124 LYLTGGTAIDATGNARANTLYGHANSAVNILTGGLGDDIYYLGAGDRAVEDADQGNDSVY 3183
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
G +H E F+ + L D + G+ G
Sbjct: 3184 GYGSEHTLAA-NVEHLFLAVATAATLTGNDLANRLRGNAGDDRLA--GLAGNDTLDGGAG 3240
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKD 552
LE A ++ L ++ A AG +
Sbjct: 3241 NDVLEGGAGNDTLQDSSGSALFTGGAGNN 3269
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 76/298 (25%), Gaps = 29/298 (9%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G++ DV++G S N++ ++G D G G DT+ + + V+
Sbjct: 2645 LLGTANKDVLVGTSGNDLLNGAAGADTMRGGDGDDTYVVDERGDTVVELANQGSDTVW-- 2702
Query: 331 NEHKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ +VE L A I+ R+ L + L D E +
Sbjct: 2703 SLVSHTLADNVENLVLAAGASINGTGNALRNRLTGNSGNNVLDGGAEADTLEGGTGNDTY 2762
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
Y+G D + + + N
Sbjct: 2763 --------------YVGDKDTVIEAADAGKDTIVSGIRWTLGANVENLTLTGTAAINGYG 2808
Query: 450 EDLINAFADAPDLVQVGKDH-------FSNFGCEEGRFVT-FDSYLYLGSYDDLRNV--- 498
DL N + + G + +Y + +
Sbjct: 2809 NDLANTLRGDTNSAANVLTGGLGDDIYYLGAGDRVVEDADQGNDSVYGYATEHTLAANVE 2868
Query: 499 -FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
AA R L +A ++ L + G D ++
Sbjct: 2869 HLFLAVATAATLTGNDLANRLRGNAGDDRLAGLAGNDTLDGGLGADTLIGGTGDDSYT 2926
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 67/502 (13%), Positives = 128/502 (25%), Gaps = 49/502 (9%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + I+ G + AD G G + A
Sbjct: 1824 VTGTAGKDVINGQAGTDNRLYGFDGDDSLNGAEVADTLAGGRGNDRLAGGFGADIYLFAN 1883
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G VD D +V ++ G D V V+
Sbjct: 1884 GDGADVINETNDTNGTVDTLRLTDLAAAAVSELARVGSDLIVRLGGS-------DQVTVR 1936
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ Y A + I + + I+ + G D +
Sbjct: 1937 QQYNAATSAGIEQITFADGLTWTADDIKARLSTLGTSAADSLTGFDGVG---------NR 1987
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G++ + T++ + + G +GND + G + + +GNDV+D D +A
Sbjct: 1988 LFGFDGSDTLSGGDRGDLLDGGNGNDWLEGLAGADTLVGGAGNDVYDIDDANDLIIEHAG 2047
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV--NVKQRSILEYTASYED 370
Y + + + + + L L A +D+V ++L+ A +
Sbjct: 2048 EGRDTAYSWVSFDLASQGSGVEVLTLLGSNPLGAAGNELDNVINGNAAANVLKGGAGNDT 2107
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L G D + + EG D D L VFG+D R T
Sbjct: 2108 LRAYGGSDNLDGGSGRDDLWGGEGDDTLDGGTGD----DTLSGVFGADTYLFRRGSGTDR 2163
Query: 431 VKEGR---------------------------NPDAFKALEYIASHEDLINAFADAPDLV 463
+ + R + ++++ +S + A +
Sbjct: 2164 IIDDRRLGAPVDRDNIRFDEGIRMQDLTIAVLSDESWQLTLAGSSDSLVFVKDAGSRFAD 2223
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
+ +G V L + D
Sbjct: 2224 GQPVIPIESLQFADGTRVDLTGALVGTAGADRLAASFFAIPTFGPVTTATINVRIDAQAG 2283
Query: 524 FKALEYIASHEDLINAFADAPD 545
+ ++ L D
Sbjct: 2284 NDTVTGGGGNDSLRGGDGDDVL 2305
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/418 (13%), Positives = 114/418 (27%), Gaps = 36/418 (8%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + N +S + +AD G G T + I A
Sbjct: 2719 AAGASINGTGNALRNRLTGNSGNNVLDGGAEADTLEGGTGNDTYYVGDKDTVIEAADAGK 2778
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G + + + ++ Y + + A + +
Sbjct: 2779 DTIVSGIRWT-LGANVENLTLTGTAAINGYGNDLANTLRGDTNSAANVLTGGLGDDIYYL 2837
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA + + ++Y + L ++ L + +++ G
Sbjct: 2838 GAGDRVVED----------ADQGNDSVYGYATEHTL-----AANVEHLFLAVATAATLTG 2882
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + + G++G+D + G + N+ G D G +G D++ +
Sbjct: 2883 ---------NDLANRLRGNAGDDRLAGLAGNDTLDGGLGADTLIGGTGDDSYTVDNLADA 2933
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASY--EDLI 372
VY + +ERL ID+ + + L A+ L
Sbjct: 2934 IHEDADAGFDTVY--SSVTWTLGEHLERLYLTGGTAIDATGNARANTLYGHANSAVNILS 2991
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+G D++ E D DS GS L A A G
Sbjct: 2992 GGLGDDIYYLGAGDRVV---EDADQGNDSVYGYGSEHTLAANVEHLFLAVATAATLTGND 3048
Query: 433 EG---RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
R L +A ++ L + G D ++ + D+
Sbjct: 3049 LANRLRGNAGDDRLAGLAGNDTLDGGLGADTLIGGTGDDSYTVDNLADAIHEDADAGF 3106
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 54/158 (34%), Gaps = 13/158 (8%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ + ++ G+D +++G + G + + + + +
Sbjct: 679 TGAAARARVVFGGDGND----SVVGETGEDAFYGGAGSDQLDGGAGDDILEGNADADELR 734
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G D ++G N+ ND G G DT Y I + + D
Sbjct: 735 GGAGRDTLLGGQGNDRLEGGDNNDTLVGGQGDDTLVGGDGEDTYVINTGDGNDHIVD--- 791
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + +++ + + + +K +YT + +D
Sbjct: 792 ------TGMNFIKYNGRLVTGLFLKSTDSDDYTFAGDD 823
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 86/270 (31%), Gaps = 15/270 (5%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ AD G G + N I Y+ G +
Sbjct: 3066 AGNDTLDGGLGADTLIGGTGDDSYTVDNLADAIHEDADAGFDTVYSSVTWTLGEHLERLY 3125
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN------NIYKI 209
+ T++ + + + + + + GA ++ + ++Y
Sbjct: 3126 LTGGTAIDATGNARANTLYGHANSAVNILTGGLGDDIYYLGAGDRAVEDADQGNDSVYGY 3185
Query: 210 EVQQKDSPFIQTIY-------DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + ++ ++ G+DL + + + ++ G N +
Sbjct: 3186 GSEHTLAANVEHLFLAVATAATLTGNDLANRLRGNAGDDRLAGLAG-NDTLDGGAGNDVL 3244
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++ SSG+ + G + NN +G+ ++ G +G DT + + R +
Sbjct: 3245 EGGAGNDTLQDSSGSALFTGGAGNNTLSGGAGSQIYLGGTGNDTLRTGPGNDIIAFNRGD 3304
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCID 352
+ A + QD LS + + D +D
Sbjct: 3305 GQDTLA-AGDSGQDVLSLGGVVAYTDLSLD 3333
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 46/360 (12%), Positives = 74/360 (20%), Gaps = 64/360 (17%)
Query: 253 IGGYEKNMTIAQHTVIES-VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G I ++ + G G+D + G + GND G G D + +
Sbjct: 1824 VTGTAGKDVINGQAGTDNRLYGFDGDDSLNGAEVADTLAGGRGNDRLAGGFGADIYLFAN 1883
Query: 312 PSYLYKIYRF----------------------------------ENAIIVYDANEHKQDF 337
I + V ++
Sbjct: 1884 GDGADVINETNDTNGTVDTLRLTDLAAAAVSELARVGSDLIVRLGGSDQVTVRQQYNAAT 1943
Query: 338 LSDVERLRFADQC----------IDSVNVKQRSILEYTAS-YEDLIQVIGQDVFESMKHF 386
+ +E++ FAD + ++ L L G D
Sbjct: 1944 SAGIEQITFADGLTWTADDIKARLSTLGTSAADSLTGFDGVGNRLFGFDGSDTLSGGDRG 2003
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G D L D L G+D G D Y
Sbjct: 2004 DLLDGGNGNDWL----EGLAGADTLVGGAGNDVYDIDDANDLIIEHAGEGRDT----AYS 2055
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
DL + G + + G + + + G
Sbjct: 2056 WVSFDLASQG--------SGVEVLTLLGSNPLGAAGNELDNVINGNAAANVLKGGAGNDT 2107
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
R Y G L + L D G D + I
Sbjct: 2108 LRAYG--GSDNLDGGSGRDDLWGGEGDDTLDGGTGDDTLSGVFGADTYLFRRGSGTDRII 2165
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 43/364 (11%), Positives = 92/364 (25%), Gaps = 62/364 (17%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY------------ 316
+++ G+D+V G + ++V GND G +G D + +
Sbjct: 1696 DTIDALGGDDLVDGLAGDDVITGGRGNDTLRGGAGSDHYRFAVGDGSDLIVDDDVTADHA 1755
Query: 317 ---KIYRFENAIIVYDANEHKQDFLSD-------------------VERLRFAD------ 348
+ ++++ + D + +E RFAD
Sbjct: 1756 DVVEFLDVASSVVTVTRPHNGNDLVLAYGGSDRLTIQAYFAGASHQIEEFRFADSVRWNV 1815
Query: 349 --------------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ + + + L + L D + G
Sbjct: 1816 GDLQERVLVTGTAGKDVINGQAGTDNRLYGFDGDDSLNGAEVADTLAGGRGNDRLAGGFG 1875
Query: 395 RDIT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
DI F + ++ + G+ V E + + S + +
Sbjct: 1876 ADIYLFANGDGADVINETNDTNGTVDTLRLTDLAAAAVSELARVGSDLIVRLGGSDQVTV 1935
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
+A + + F++ + S D F +
Sbjct: 1936 RQQYNAATSAGIEQITFADGLTWTADDIKARLSTLGTSAADSLTGFDGVGNRLFGFDGSD 1995
Query: 514 GVKEGRNPD------AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
+ G D LE +A + L+ + + D EGR +
Sbjct: 1996 TLSGGDRGDLLDGGNGNDWLEGLAGADTLVGGAGNDVYDIDDANDLIIEH-AGEGRDTAY 2054
Query: 568 NPDL 571
+
Sbjct: 2055 SWVS 2058
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 63/225 (28%), Gaps = 64/225 (28%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G++GND + G S N+ +GND G +G DT+F+ S I +++ + D
Sbjct: 1556 DLTGTTGNDTLTGTSVNDRLDGGAGNDSLRGGAGSDTYFWGLDSGNDTIDNSDSS-LDTD 1614
Query: 330 ANEHKQDFLSD--------------------------------VERLRFADQ-------- 349
L+D ++R+RFAD
Sbjct: 1615 RLIIGNGLLADDLIFARSHDDLVIRVRTSGEHVLVLRHFAGAPIDRVRFADGSEWNGAEI 1674
Query: 350 --------------------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY-- 387
+ +++ A + + G D
Sbjct: 1675 ATHLSTELSEGADIYTATLASDTIDALGGDDLVDGLAGDDVITGGRGNDTLRGGAGSDHY 1734
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
F + +G D+ D + D+ +G
Sbjct: 1735 RFAVGDGSDLIVDD-DVTADHADVVEFLDVASSVVTVTRPHNGND 1778
Score = 42.1 bits (97), Expect = 0.33, Method: Composition-based stats.
Identities = 63/505 (12%), Positives = 120/505 (23%), Gaps = 82/505 (16%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
R I D G G L D
Sbjct: 1293 RGGDGADTLIGGTDTDYLEGGAGDDIYLFAAG---------------------------D 1325
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-IVAVQKIYGAPKGSLGNNIYKIEV 211
D+ D+ + S +++ ++ YG L + +
Sbjct: 1326 SPRDADGFVEYVVDAEGDNTIVFSNATPTDLRIANSGGSLLITYGTNDQLLIKDGLAGSI 1385
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+T+ + V + + S G + + +
Sbjct: 1386 GHYRFANGETLS-------YSELIGRLVDTPMGAASGGRSFWFGGSLDDYLVATDGHTTF 1438
Query: 272 VGSSGNDVVIGNSANNV--FFESSGNDVF---------DGSSGLDTFFYYAPSYLYKIYR 320
G G+D +IG N + G D DG++ +T + A I
Sbjct: 1439 SGGRGDDTLIGYGGRNTYLYSRGDGTDRIIDTSTKTDADGTALPNTLRFGAGITADDIRL 1498
Query: 321 FENAIIVYDAN---------------EHKQDFLSDVERLRFADQCIDSVNVKQRSILE-- 363
++ + + ++R FAD S +
Sbjct: 1499 AIGSLKILVGSNPDDAIHIDGFDPDDALGTKKPPAIDRFEFADGTALSYGELLARGFDLT 1558
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
T + L D + G D F G+D +
Sbjct: 1559 GTTGNDTLTGTSVNDRLDGGAGNDSLRGGAGSDTYFWGLD-----------SGNDTIDNS 1607
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ N L + SH+DL+ + + V HF+ + RF
Sbjct: 1608 DSSLDTDRLIIGNGLLADDLIFARSHDDLVIRVRTSGEHVL-VLRHFAGAPIDRVRFADG 1666
Query: 484 DSYLY--LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
+ + ++ G+D A ++ +A + +
Sbjct: 1667 SEWNGAEIATHLSTELSEGADIYTATL-----ASDTIDALGGDDLVDGLAGDDVITGGRG 1721
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT 566
+ AG DH+ + I
Sbjct: 1722 NDTLRGGAGSDHYRFAVGDGSDLIV 1746
Score = 40.2 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 15/147 (10%), Positives = 31/147 (21%), Gaps = 12/147 (8%)
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
V G G D+ + Y + + D + + L +
Sbjct: 687 VVFGGDGNDSVV--GETGEDAFYGGAGSDQL--------DGGAGDDILEGNADADELRGG 736
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY--DDLRNV 414
R L + L D + +G D + + D N
Sbjct: 737 AGRDTLLGGQGNDRLEGGDNNDTLVGGQGDDTLVGGDGEDTYVINTGDGNDHIVDTGMNF 796
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFK 441
+ ++ +
Sbjct: 797 IKYNGRLVTGLFLKSTDSDDYTFAGDD 823
>gi|15839348|ref|NP_300036.1| hemolysin-type calcium binding protein [Xylella fastidiosa 9a5c]
gi|9108001|gb|AAF85544.1|AE004081_16 hemolysin-type calcium binding protein [Xylella fastidiosa 9a5c]
Length = 1296
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 79/571 (13%), Positives = 148/571 (25%), Gaps = 92/571 (16%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + + +G + + I D + G G T+ +
Sbjct: 623 ITGSARSDVLLGTSGNDMIIGEVTGNDVLIGKGGNDTLQGGSGDDTLDGGTGNDTL---- 678
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
+ G Y DS V + T + +
Sbjct: 679 ------NGGAGNDTYRFAIGAGVDSIYEDVTATSDTDIVTFADVRSTALTALERKDYDLV 732
Query: 193 KIYGAPKGSLGNNI----YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
YG NN Y ++ + +D ++ NY+ +
Sbjct: 733 IKYGTSDQLTINNYFHPCYSGAKIEQFTFSDGVTWDDAAIKARVISNGDASNNYLRGYKD 792
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ I G + N I + + + G +GND++ G + SGND+ G +G DT+
Sbjct: 793 GSNRIYGLDGNDEIYGGALDDMLDGGAGNDMLSGGKGADTLDGGSGNDMLYGGTGNDTYR 852
Query: 309 YYAPSYLYKIYRFE-------------------------NAIIVYDANEHKQDFLSD--- 340
+ + + +I + ++ +V Q +S+
Sbjct: 853 FAIGAGVDRIEESDATAGNTDVVRFADVASSALTALERKDSDLVIKYGTSDQLTISNYFY 912
Query: 341 -----VERLRFA-----------------------------DQCIDSVNVKQRSILEYTA 366
VE+ F+ D + + A
Sbjct: 913 SAEYKVEQFTFSNGVTWDEAAIKARVISNGDANNNYLVGYNDGSNRIYGLDGNDTIYGGA 972
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L G D+ K G D+ + D R G+
Sbjct: 973 LDDMLYGGAGNDMLSGGKGADTLDGGSGNDMLYGGTG----NDTYRFAIGAGVDRIEESD 1028
Query: 427 ITHGVKEGRNPDAFKALEYIA---SHEDLINAFADAPDLVQVGKDHFSNFGCEE---GRF 480
T G + A DL+ + + L + + + E+
Sbjct: 1029 ATAGNTDVVRFADVAFSALTALERKDSDLVIKYGTSDQLTISNYFYSAEYKVEQFTFSNG 1088
Query: 481 VTFDSYLYLG---SYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
VT+D S D N + + R Y G E L+ A ++ L
Sbjct: 1089 VTWDEAAIKARVISNGDASNNYLRGYKDGSNRIYGLDGNDEIYGGALDDMLDGGAGNDML 1148
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
+G D +G + F
Sbjct: 1149 SGGGGADTLDGGSGND--MLYGGTGNDTYRF 1177
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/435 (13%), Positives = 108/435 (24%), Gaps = 89/435 (20%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D + M AD G G + A+G
Sbjct: 801 DGNDEIYGGALDDMLDGGAGNDMLSGGKGADTLDGGSGNDMLYGGTGNDTYRFAIG---- 856
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
D S + T + + YG
Sbjct: 857 ---------------AGVDRIEESDATAGNTDVVRFADVASSALTALERKDSDLVIKYGT 901
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTI---YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+N Y + K F + +D ++ NY+ + + I
Sbjct: 902 SDQLTISN-YFYSAEYKVEQFTFSNGVTWDEAAIKARVISNGDANNNYLVGYNDGSNRIY 960
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N TI + + + G +GND++ G + SGND+ G +G DT+ + +
Sbjct: 961 GLDGNDTIYGGALDDMLYGGAGNDMLSGGKGADTLDGGSGNDMLYGGTGNDTYRFAIGAG 1020
Query: 315 LYKIYRFE-------------------------NAIIVYDANEHKQDFLSD--------V 341
+ +I + ++ +V Q +S+ V
Sbjct: 1021 VDRIEESDATAGNTDVVRFADVAFSALTALERKDSDLVIKYGTSDQLTISNYFYSAEYKV 1080
Query: 342 ERLRFA-----------------------------DQCIDSVNVKQRSILEYTASYEDLI 372
E+ F+ D + + A + L
Sbjct: 1081 EQFTFSNGVTWDEAAIKARVISNGDASNNYLRGYKDGSNRIYGLDGNDEIYGGALDDMLD 1140
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D+ G D+ + D R G+ + T G
Sbjct: 1141 GGAGNDMLSGGGGADTLDGGSGNDMLYGGTG----NDTYRFAIGAGVDRIEDYDTTTGNA 1196
Query: 433 EGRNPDAFKALEYIA 447
+ + ++ +
Sbjct: 1197 DVLSIGQGVSINQLW 1211
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 77/270 (28%), Gaps = 5/270 (1%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ ++ ++ N D+ G G + + G
Sbjct: 941 NGDANNNYLVGYNDGSNRIYGLDGNDTIYGGALDDMLYGGAGNDMLSGGKGADTLDGGSG 1000
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G Y D S + T + +
Sbjct: 1001 -NDMLYGGTGNDTYRFAIGAGVDRIEESDATAGNTDVVRFADVAFSALTALERKDSDLVI 1059
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTI---YDSGGDDLLDLTLIGGVKNYIDLNTESW 250
YG +N Y + K F + +D ++ NY+ +
Sbjct: 1060 KYGTSDQLTISN-YFYSAEYKVEQFTFSNGVTWDEAAIKARVISNGDASNNYLRGYKDGS 1118
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ I G + N I + + + G +GND++ G + SGND+ G +G DT+ +
Sbjct: 1119 NRIYGLDGNDEIYGGALDDMLDGGAGNDMLSGGGGADTLDGGSGNDMLYGGTGNDTYRFA 1178
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + +I ++ D Q +
Sbjct: 1179 IGAGVDRIEDYDTTTGNADVLSIGQGVSIN 1208
>gi|257796209|dbj|BAI39458.1| putative glycosyltransferase [Gluconacetobacter intermedius]
Length = 983
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 78/268 (29%), Gaps = 18/268 (6%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLY 404
+ + + Y L ++ ++ + G + G FD Y
Sbjct: 6 DNAEMAAGWATFDPAWYYARHAAMLD-LMDIPPEQAQAFYEAHGAALGHSPNPFFDEDWY 64
Query: 405 LGSYDDLRN-VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
+Y D+ V + HY+ G+ F Y+A++ D+ A A
Sbjct: 65 RATYPDVAQQVLAGTWHSGFDHYLNAGLDTHDPHWLFDTRTYLAAYPDITPATLAAG-GY 123
Query: 464 QVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG--R 519
+ DH+ G E R + FD YL L Y+ G+ R
Sbjct: 124 RNAYDHYLRTGDGEMRSGSCFFDPETYLAL---LAECQHDTITHPFADYLRRGMAALPCR 180
Query: 520 NPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFS--NFGYEEGRSITFNPDLYLTSY 576
+ F A Y ++ D H+ F+ Y
Sbjct: 181 SVSLYFDAEWYAQTYPDAHADITQGMWRG--ALHHYLCNTTPQAFDPGPFFSESFYAMVN 238
Query: 577 DDLWNVF-GSDRSAAAQHYITHGMKEGR 603
D+ + H+++ G+ E R
Sbjct: 239 PDVLGAIEAGNLRNGYAHFLSDGVHEQR 266
>gi|85703937|ref|ZP_01035040.1| calcium binding hemolysin protein, putative [Roseovarius sp. 217]
gi|85671257|gb|EAQ26115.1| calcium binding hemolysin protein, putative [Roseovarius sp. 217]
Length = 1708
Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 64/536 (11%), Positives = 133/536 (24%), Gaps = 60/536 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+++ + S + I D G G T++ + G
Sbjct: 1105 GNELDNMLSGGAGNDNLEGLGGDDVLITGSGDDTVSAGAGDDTVVVGLGNKNLNGGSGFD 1164
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT-PMVSDIVAVQKI 194
+ L + D D T + + VA+ +
Sbjct: 1165 TLDFGTVSGAISLNLGTGTYTGSLIDRSPRWADLDPDGDGIAESDGTEARIFNSVALTPL 1224
Query: 195 ----YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI-------GGVKNYI 243
+ + +++ ++ D F + GG +
Sbjct: 1225 DVFEANPIQSNSADDLSRVLPTLGDDEFSAFQIALVDIETSAFGSFIDFERVIGGDSDDA 1284
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
T + + + G + + + G GND + G + ++ +GND G +G
Sbjct: 1285 FTGTGAANQLSGGAGQDNLTGLAGNDELSGGLGNDTLNGGADDDTLDGGAGNDSLLGGAG 1344
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC------------- 350
D + S I + + + ++ + D + +E RF D
Sbjct: 1345 FDLAIFAVASTEVNISQADGPLTLF--SSEGDDTVDGIESFRFTDATLTLAQVLALPPVG 1402
Query: 351 ------------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ + + + G D +
Sbjct: 1403 QQVTGTAGNDTINGDAGDDTLIGQGGNDSILGLGGDDGVFGEAGNDTLSGGDGNDSIAGA 1462
Query: 393 EGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+G D+ + + G +D N D A G + A
Sbjct: 1463 DGDDVVNGGAGNDNIGGGFGNDTINGGDGDDIMGAG----FGDDSVVGAAGNDVVAGGAG 1518
Query: 449 HEDLINAFADAPDLVQVGKD--HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
++ L D G D + + G D+ D + G D
Sbjct: 1519 NDTLSGGSGDDSMSGSFGNDLINAGGGADDIGGGAGQDTIDAGAGNDRVGAGEGDD---- 1574
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
+ G ++ A ++ + + G D F + EG
Sbjct: 1575 -SVFGGDGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVITGGTGADQFVFASFFEG 1629
Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 60/438 (13%), Positives = 115/438 (26%), Gaps = 28/438 (6%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDI 79
D + +N D L+ + E + + + + FE I D
Sbjct: 1225 DVFEANPIQSNSADDLSRVLPTLGDDEFSAFQIALVDIETSAFGSF--IDFERV-IGGDS 1281
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH--- 136
+ G + D G+G T+ + G
Sbjct: 1282 DDAFTGTGAANQLSGGAGQDNLTGLAGNDELSGGLGNDTLNGGADDDTLDGGAGNDSLLG 1341
Query: 137 --PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
N + D LT S +++ AT ++ ++A+ +
Sbjct: 1342 GAGFDLAIFAVASTEVNISQADGPLTLFSSEGDDTVDGIESFRFTDATLTLAQVLALPPV 1401
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G+ GN+ T+ GG+D + ++
Sbjct: 1402 GQQVTGTAGNDT------INGDAGDDTLIGQGGNDSILGLGGDDGV----FGEAGNDTLS 1451
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N +IA + V G +GND + G N+ G+D+ G D+ +
Sbjct: 1452 GGDGNDSIAGADGDDVVNGGAGNDNIGGGFGNDTINGGDGDDIMGAGFGDDSVV--GAAG 1509
Query: 315 LYKIYRFENAIIVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + + S + + D + ++ A + +
Sbjct: 1510 NDVVAGGAGNDTLSGGSGDDSMSGSFGNDLINAGGGADDIGGGAGQDTIDAGAGNDRVGA 1569
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD---RGAAARHYITHG 430
G D D D + G+D G A ++
Sbjct: 1570 GEGDDSVFGGDGNDFLAGGGRNDTI----DGGAGNDTINAGAGNDVITGGTGADQFVFAS 1625
Query: 431 VKEGRNPDAFKALEYIAS 448
EG + I S
Sbjct: 1626 FFEGEADVVTDFEDGIDS 1643
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 55/431 (12%), Positives = 111/431 (25%), Gaps = 69/431 (16%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+D V +++ G GS G + +V + G + + +++
Sbjct: 912 NDFVQIERFRGHADGSTGYDTISFDVAFSSRIVADL---AAGTVASFKGVPSSNADQVNM 968
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
E++ + E N I E ++G GND + G N+ F +GND +G +G D
Sbjct: 969 TLENFEVLIATEFNDLIDGSAQSEQILGRGGNDTLRGAGGNDKLFGGNGNDTLEGGAGDD 1028
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDA-----------------------------NEHKQD 336
+ + + ++ A D
Sbjct: 1029 --LLHGGAGSDSLDGGADSDTASYAWARPGSLTGAIIADTFGAVSVNLETGIATGAFGSD 1086
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
L +E + + + ++L A ++L + G DV + G D
Sbjct: 1087 TLISIENVIGTGANDILLGNELDNMLSGGAGNDNLEGLGGDDVLITGSGDDTVSAGAGDD 1146
Query: 397 I--------------TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
FD+ + + G+ + + + A
Sbjct: 1147 TVVVGLGNKNLNGGSGFDTLDFGTVSGAISLNLGTGTYTGSLIDRSPRWADLDPDGDGIA 1206
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV---- 498
+ D+ + ++ T + L ++
Sbjct: 1207 ESDGTEARIFNSVALTPLDVFEANPIQSNSADDLSRVLPTLGDDEFSAFQIALVDIETSA 1266
Query: 499 -----------------FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
+ GAA + G L ++ L
Sbjct: 1267 FGSFIDFERVIGGDSDDAFTGTGAANQLSGGAGQDNLTGLAGNDELSGGLGNDTLNGGAD 1326
Query: 542 DAPDLVQAGKD 552
D AG D
Sbjct: 1327 DDTLDGGAGND 1337
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 55/387 (14%), Positives = 103/387 (26%), Gaps = 23/387 (5%)
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
+ I + D+ IL + A G NG + G D
Sbjct: 975 VLIATEFNDLIDGSAQSEQILGRGGNDTLRGAGGNDKLFGGNGNDTLEGGAGDDLLHGGA 1034
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI 219
S ++ + + I +GA +L I I
Sbjct: 1035 GSDSLDGGADSDTASYAWARPGSLTGAIIAD---TFGAVSVNLETGIATGAFGSDTLISI 1091
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+ + +G +D I L E + + G N + + ++ SG+D
Sbjct: 1092 ENVIGTGAND-------------ILLGNELDNMLSGGAGNDNLEGLGGDDVLITGSGDDT 1138
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII--VYDANEHKQDF 337
V + ++ GN +G SG DT + S + + D + D
Sbjct: 1139 VSAGAGDDTVVVGLGNKNLNGGSGFDTLDFGTVSGAISLNLGTGTYTGSLIDRSPRWADL 1198
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGR 395
D + + +D + + D+ + EF +
Sbjct: 1199 DPDGDGIAESDGTEARIFNSVALTPLDVFEANPIQSNSADDLSRVLPTLGDDEFSAFQIA 1258
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
+ ++ GS+ D V G D A G L +A +++L
Sbjct: 1259 LVDIETSA-FGSFIDFERVIGGDSDDAFTGTGAANQLSGGAGQ--DNLTGLAGNDELSGG 1315
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ D +
Sbjct: 1316 LGNDTLNGGADDDTLDGGAGNDSLLGG 1342
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 47/327 (14%), Positives = 92/327 (28%), Gaps = 25/327 (7%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D ++ GGV DL W G + + + + GND ++G N+V
Sbjct: 301 DTVESAFFGGVVGEADLGPTGW----GNDVGNVLVGDDGDDILDALDGNDTILGGGGNDV 356
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-ENAIIVYDANEHKQDFLSDVERLRFA 347
+G+D+ +G +G D F++ A Y++ R + I+ + + ++ L
Sbjct: 357 IIAGAGSDLLNGGAGDDLFYFGASFTEYELLRDPDTGDIIVSHLAPQTAVNTGIDTLVAL 416
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
D V I G ++ + +G T D S
Sbjct: 417 DDGDHVVFTD--------------ISFTGAELNNARIGGSVLNGDQGGVPTDDLLFLNSS 462
Query: 408 YDD--LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ + ++ + N + +D N +
Sbjct: 463 RPENRINGFHVANGLLGDDRIFGSIEADQLNGGPGDDVLVPGRGDDQANGGTGTDTFQVL 522
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
+ L S +++ D T G D
Sbjct: 523 RGANSRLRVDLINGTSFGQGQDTLSSVENVVASPDQDHTVR----GTDGANAIYTGDGVD 578
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKD 552
+ A ++ + D + AG D
Sbjct: 579 IITGRAGNDTIDAGGDDDYIIGGAGAD 605
>gi|325200728|gb|ADY96183.1| iron-regulated protein FrpA [Neisseria meningitidis H44/76]
Length = 1302
Score = 95.2 bits (235), Expect = 4e-17, Method: Composition-based stats.
Identities = 70/497 (14%), Positives = 132/497 (26%), Gaps = 71/497 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 738 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGR 797
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 798 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 857
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 858 VLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 913
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 914 IYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 973
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 974 SDTYVFGKGFGQDAVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 1033
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 1034 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGD 1093
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D + + Y +G
Sbjct: 1094 DYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDALNGG 1144
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ L ++ LI + G D + EG ++ D
Sbjct: 1145 EGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG---EGFGQDTVYNYHVDKNSDTM- 1200
Query: 498 VFGSDRGAAARHYITHG 514
AA H+I G
Sbjct: 1201 -HFKGFKAADVHFIRSG 1216
>gi|254513629|ref|ZP_05125693.1| iron-regulated protein FrpC [Rhodobacteraceae bacterium KLH11]
gi|221532138|gb|EEE35135.1| iron-regulated protein FrpC [Rhodobacteraceae bacterium KLH11]
Length = 2924
Score = 94.9 bits (234), Expect = 4e-17, Method: Composition-based stats.
Identities = 69/478 (14%), Positives = 132/478 (27%), Gaps = 45/478 (9%)
Query: 103 NFDKADVWRYGIGKGT-ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTS 161
D + I ++ I G + NG +YG D + D
Sbjct: 2255 GGTGNDDLKGNDDDSNKIEGNSGSDVIRGYDGNDNLKGGNGSDKIYGND---DRDYLYGG 2311
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFI 219
+ + D +G + + IYG S ++IY +
Sbjct: 2312 SGADRIKGGKGNDRIYGEAGSDKLYGESGADTIYG---HSGDDSIYGGSANDKLYGGDGY 2368
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
I +D + G I I G N TI+ + + + G SG D+
Sbjct: 2369 DYIEGGSNNDTI--KGGSGGDRLI--GGSGHDWIEGEAGNDTISGGSNNDRLFGGSGADI 2424
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFEN--------- 323
+ G + N+ + +D+ G +G DT + + +
Sbjct: 2425 LSGYNGNDSLDGGADDDILRGEAGADTLIGGDGRDYLEGGTGADILDGGVGLLDAAVYLN 2484
Query: 324 ---------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ ++ + D L+++E + ++ + ++L A + L
Sbjct: 2485 SAAGVTVNLSTGLHSGGDATGDVLTNIENIIGSNHGDNLTGDDFDNLLGGGAGDDTLAGG 2544
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D + + EG D D ++ G D + T G
Sbjct: 2545 NGHDRLYGDEGNDQIDAGEGV----DRVWGGAGQDTVQLGAGDDVFHGDDNGDTLGHDSV 2600
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
D + ++ + + Q+G D S ++ F G
Sbjct: 2601 SGGDGNDVIYGDLGNDTITGDAGNDYIHGQIGNDSLSGGIGDDAIFGGEGQDSLSGDDGA 2660
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G D + E L ++ L F + + G D
Sbjct: 2661 DILYGGDDIDFL---WGGKDHDELHGGTGDDTLNGDLGNDKLFGGFGNDSLVGGEGND 2715
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 58/448 (12%), Positives = 109/448 (24%), Gaps = 17/448 (3%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
T S D G G I + I G +G
Sbjct: 2336 YGESGADTIYGHSGDDSIYGGSANDKLYGGDGYDYIEGGSNNDTIKGGSGGDRLIGGSGH 2395
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ G + + + ++ G + +D ++ GA G
Sbjct: 2396 DWIEGEAGNDTISGGSNNDRLFGGSGADILSGYNGNDSLDGGADDDILRGEAGADTLIGG 2455
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + G + L ++L+T S GG +
Sbjct: 2456 D----GRDYLEGGTGADILDGGVGLLDAAVYLNSAAGVTVNLSTGLHS--GGDATGDVL- 2508
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T IE+++GS+ D + G+ +N+ +G+D G +G D + +I E
Sbjct: 2509 --TNIENIIGSNHGDNLTGDDFDNLLGGGAGDDTLAGGNGHDRLY--GDEGNDQIDAGEG 2564
Query: 324 AIIVYDANEHKQDFLSDVERLRFAD------QCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
V+ L + + D ++ + + G
Sbjct: 2565 VDRVWGGAGQDTVQLGAGDDVFHGDDNGDTLGHDSVSGGDGNDVIYGDLGNDTITGDAGN 2624
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D F D + E
Sbjct: 2625 DYIHGQIGNDSLSGGIGDDAIFGGEGQDSLSGDDGADILYGGDDIDFLWGGKDHDELHGG 2684
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
L ++ L F + + G D + ++ + + S D
Sbjct: 2685 TGDDTLNGDLGNDKLFGGFGNDSLVGGEGNDTLNGGAGQDSIYGGSGDDFIIYSAGDDYI 2744
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFK 525
G D + D F
Sbjct: 2745 SAGWDYADTLDLSKYSSNQVKFRADTFD 2772
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 60/384 (15%), Positives = 99/384 (25%), Gaps = 45/384 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D T + S I D G TI + + G
Sbjct: 2363 YGGDGYDYIEGGSNNDTIKGGSGGDRLIGGSGHDWIEGEAGNDTISGGSNNDRLFGGSGA 2422
Query: 135 MHPGSYNGGYPVYGVDND------YENDSFLTSVMSYFMPQDSMMD---ASFGYCATPMV 185
YNG + G +D D+ + ++ + D G +
Sbjct: 2423 DILSGYNGNDSLDGGADDDILRGEAGADTLIGGDGRDYLEGGTGADILDGGVGLLDAAVY 2482
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ A + + G + + ++ D+ D D L GG +
Sbjct: 2483 LNSAAGVTVNLSTGLHSGGDATGDVLTNIENIIGSNHGDNLTGDDFDNLLGGGAGDDTLA 2542
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF--------------E 291
+ G E N I ++ V G +G D V + ++VF
Sbjct: 2543 GGNGHDRLYGDEGNDQIDAGEGVDRVWGGAGQDTVQLGAGDDVFHGDDNGDTLGHDSVSG 2602
Query: 292 SSGNDVFDGSSGLDTF-------FYYAPSYLYKIYR-------FENAIIVYDANEHKQDF 337
GNDV G G DT + + + F + + D
Sbjct: 2603 GDGNDVIYGDLGNDTITGDAGNDYIHGQIGNDSLSGGIGDDAIFGGEGQDSLSGDDGADI 2662
Query: 338 LSDVERLRFADQC---IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
L + + F + L + L G D + G
Sbjct: 2663 LYGGDDIDFLWGGKDHDELHGGTGDDTLNGDLGNDKLFGGFGNDSLVGGEGNDTLNGGAG 2722
Query: 395 RDITFDSYLYLGSYDDLRNVFGSD 418
+D +Y GS DD D
Sbjct: 2723 QD-----SIYGGSGDDFIIYSAGD 2741
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 71/257 (27%), Gaps = 10/257 (3%)
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTS 161
D G + EI G V D D+
Sbjct: 1875 SGGAGNDTIWGGSNDDFLAGDAGADEIRGFGGNDVLFVDAEDLAAGNVSGDEGIDTLKF- 1933
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA-PKGSLGNNIYKIEV---QQKDSP 217
V + + DI A ++ G+ GN+ Q
Sbjct: 1934 VDDAAATINLETLNVEVVHSGAGDDDISAGTRLVDTFIDGAAGNDTISGGSGADQLNGGR 1993
Query: 218 FIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
I G D + D L G + I + ++ G + + +++
Sbjct: 1994 GDDQISGGSGTDYIAGGTGDDQLFGQDGDDIVQGNDGDDALFGGNGDDWLLGDNGNDTLS 2053
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G+D + G + ++V G+D G G D +++ ++ + +N+
Sbjct: 2054 GEGGDDFIQGGAGDDVLKGGYGDDQLLGGEGDDALYFWHGDDQLIGGDGDDTFHLARSND 2113
Query: 333 HKQDFLSDVERLRFADQ 349
H L ++
Sbjct: 2114 HGTSSLQGWSIIQGGKG 2130
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 49/373 (13%), Positives = 98/373 (26%), Gaps = 64/373 (17%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ + D + D G G + +I G+ G
Sbjct: 2516 GSNHGDNLTGDDFDNLLGGGAGDDTLAGGNGHDRLYGDEGNDQIDAGEGVDRVWGGAGQD 2575
Query: 145 PVYGVDND--YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
V D + D ++ + D +G ++ I+G
Sbjct: 2576 TVQLGAGDDVFHGDDNGDTLGHDSVSGGDGNDVIYGDLGNDTITGDAGNDYIHGQI---- 2631
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I+ G D +L G I + + G + + +
Sbjct: 2632 ------GNDSLSGGIGDDAIFGGEGQD----SLSGDDGADILYGGDDIDFLWGGKDHDEL 2681
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------------- 308
T +++ G GND + G N+ GND +G +G D+ +
Sbjct: 2682 HGGTGDDTLNGDLGNDKLFGGFGNDSLVGGEGNDTLNGGAGQDSIYGGSGDDFIIYSAGD 2741
Query: 309 ------------------------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ A ++ I + I + ++ + S++E +
Sbjct: 2742 DYISAGWDYADTLDLSKYSSNQVKFRADTFDVFIQTPDGEIQLSYQLQYDTGYRSNIENI 2801
Query: 345 RFAD----------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
F+D + ID + T + + G DV +F G
Sbjct: 2802 IFSDTVLDDASIRIRAIDDQATGGDDTIIGTPQNDAINGGQGNDVLIGNNGADQFLFEVG 2861
Query: 395 RDITFDSYLYLGS 407
+ +
Sbjct: 2862 DGSDQITDYDVAK 2874
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 76/283 (26%), Gaps = 16/283 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND + G S ++ +G D G G D F A + I
Sbjct: 1874 ISGGAGNDTIWGGSNDDFLAGDAGADEIRGFGGNDVLFVDAEDLAAGNVSGDEGIDTLKF 1933
Query: 331 NEHKQDFLS----DVERLR--FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ ++ +VE + D I + + ++ A + + G D +
Sbjct: 1934 VDDAAATINLETLNVEVVHSGAGDDDISAGTRLVDTFIDGAAGNDTISGGSGADQLNGGR 1993
Query: 385 HFYEFGLSEGRD----ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ G D T D L+ DD+ D + +G +
Sbjct: 1994 GDDQISGGSGTDYIAGGTGDDQLFGQDGDDIVQGNDGDDAL----FGGNGDDWLLGDNGN 2049
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
L + + D G D ++ + +G D + F
Sbjct: 2050 DTLSGEGGDDFIQGGAGDDVLKGGYGDDQLLGGEGDDALYFWHGDDQLIGGDGD--DTFH 2107
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
R G + F L A +
Sbjct: 2108 LARSNDHGTSSLQGWSIIQGGKGFDTLVLNAGGFSNPKYIGNN 2150
>gi|15676490|ref|NP_273629.1| putative iron-regulated protein FrpA [Neisseria meningitidis MC58]
gi|12230092|sp|Q9K0K9|FRPA_NEIMB RecName: Full=Iron-regulated protein frpA
gi|7225814|gb|AAF41013.1| putative iron-regulated protein FrpA [Neisseria meningitidis MC58]
Length = 1302
Score = 94.9 bits (234), Expect = 4e-17, Method: Composition-based stats.
Identities = 70/497 (14%), Positives = 132/497 (26%), Gaps = 71/497 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 738 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGR 797
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 798 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 857
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 858 VLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 913
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 914 IYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 973
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 974 SDTYVFGKGFGQDAVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 1033
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 1034 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGD 1093
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D + + Y +G
Sbjct: 1094 DYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDALNGG 1144
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ L ++ LI + G D + EG ++ D
Sbjct: 1145 EGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG---EGFGQDTVYNYHVDKNSDTM- 1200
Query: 498 VFGSDRGAAARHYITHG 514
AA H+I G
Sbjct: 1201 -HFKGFKAADVHFIRSG 1216
>gi|119486635|ref|ZP_01620685.1| hypothetical protein L8106_12830 [Lyngbya sp. PCC 8106]
gi|119456252|gb|EAW37384.1| hypothetical protein L8106_12830 [Lyngbya sp. PCC 8106]
Length = 1927
Score = 94.9 bits (234), Expect = 4e-17, Method: Composition-based stats.
Identities = 59/370 (15%), Positives = 98/370 (26%), Gaps = 17/370 (4%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
M F+ +D G+ + + + G S NG + N
Sbjct: 1570 TFGGDDMVAAFNGSDTVFGGVDNDLYFGDDGNDYLLGSDGRDTIISSNGVGDLAAAANSE 1629
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
NDS Y + ++ + M+ YG L +
Sbjct: 1630 NNDSV------YGHQSNDLLQGG---PGSDMMFGGKQDDFTYGGKNSDLVWGDLGTDTLY 1680
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
D I D+ ++ ++ + G N T++ ++V G
Sbjct: 1681 GDLGNDTMIGDTADENNIEAERGLPGMIDFMWGGAGDDLMNGGRSNDTLSGGVGNDTVRG 1740
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+D+V G + ++ + GND G+ G DT Y + +
Sbjct: 1741 GKEDDLVYGEAGDDEMYGDLGNDQLCGNEGNDT-VYGDINDNDTPSDIPGRDTLCGG--I 1797
Query: 334 KQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D L E RL + IL + L G D+ F
Sbjct: 1798 GNDILFGNEDQDRLCGGEDSDTLYGGLGEDILAGEQGDDWLFGDQGNDLISGGSGVDRFI 1857
Query: 391 --LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G D D L + + T EG+ + A
Sbjct: 1858 LFSGSGTDTIQDFQLGTDLIALGGGLTFEQLTLSQSGTSTVVSLEGQQLAILNDVSVSAL 1917
Query: 449 HEDLINAFAD 458
ED AF
Sbjct: 1918 TEDNFTAFVG 1927
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 60/353 (16%), Positives = 96/353 (27%), Gaps = 36/353 (10%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L LT ++ I TE ++ G + + + V +G+D V G N++
Sbjct: 1535 DRLGLTPQLASESNIIRGTEQSDTLPGTPTSDVVLTFGGDDMVAAFNGSDTVFGGVDNDL 1594
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYL-YKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+F GND GS G DT EN VY + L+
Sbjct: 1595 YFGDDGNDYLLGSDGRDTIISSNGVGDLAAAANSENNDSVYGHQSND--------LLQGG 1646
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL---------SEGRDIT 398
KQ + + + +G D +E
Sbjct: 1647 PGSDMMFGGKQDDFTYGGKNSDLVWGDLGTDTLYGDLGNDTMIGDTADENNIEAERGLPG 1706
Query: 399 FDSYLYLGSYDDLRNVFGSDRGA--AARHYITHGVKEG--RNPDAFKALEYIASHEDLIN 454
+++ G+ DDL N S+ + G KE +A Y D +
Sbjct: 1707 MIDFMWGGAGDDLMNGGRSNDTLSGGVGNDTVRGGKEDDLVYGEAGDDEMYGDLGNDQLC 1766
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
+ D+ GR L +D + G + Y
Sbjct: 1767 GNEGNDTVYGDINDN-DTPSDIPGRDTLCGGIGNDILFGNEDQDRLCGGEDSDTL--YGG 1823
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
G L + L + +G D F F +I
Sbjct: 1824 LGE---------DILAGEQGDDWLFGDQGNDLISGGSGVDRFILFSGSGTDTI 1867
>gi|86136135|ref|ZP_01054714.1| type I secretion target repeat protein [Roseobacter sp. MED193]
gi|85827009|gb|EAQ47205.1| type I secretion target repeat protein [Roseobacter sp. MED193]
Length = 1088
Score = 94.9 bits (234), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/351 (11%), Positives = 86/351 (24%), Gaps = 18/351 (5%)
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
+ YG+ +D + M + + D +++
Sbjct: 338 DGNSFTSYGLSSDSSLTTQTDGNMVTATGSEMNNYTDQDAWFSAEFEDRSSIEFTLQTRD 397
Query: 200 GSLG----NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G ++ V T+ GDD++ G N + E S+ G
Sbjct: 398 GYSGFTLSGDVIDDPVLTPIEQGSDTVMAGEGDDVV----YGQGGNDSLMGEEGDDSLDG 453
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + + ++++G +G D + G ++ G+D G DT
Sbjct: 454 GEGDDVMDGGVGADTLMGGAGGDTLSGGEGDDYIDGGEGDDFLSTGIGNDTLV--GGEGN 511
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
++ + + + D + + L
Sbjct: 512 DTLHNSAGDDSLVGG--------VGNDSIVATDGNDTLEGGIGDDTMFGGNDNDSLDGGD 563
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G DV + +G D L N + G R
Sbjct: 564 GADVLDGGAGSDTLIGGDGGDTISGGDGDDYIEGGLGNDSLTTGLGNDTLIGGEGDDTLR 623
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
N +L ++ ++ + G D +
Sbjct: 624 NSAGDDSLVGGVGNDSIVATDGNDTLEGGSGADTMYGGNDNDLLAGGTGDD 674
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/431 (13%), Positives = 116/431 (26%), Gaps = 38/431 (8%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ T + D GIG T++ + ++
Sbjct: 458 DVMDGGVGADTLMGGAGGDTLSGGEGDDYIDGGEGDDFLSTGIGNDTLVGGEGNDTLHNS 517
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G G + D + + + + + +D G + +
Sbjct: 518 AGDDSLVGGVGNDSIVATDGNDTLEGGIGDDTMFGGNDNDSLDGGDGADVLDGGAGSDTL 577
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
G S G+ + + ++ G+D L GG + N+
Sbjct: 578 IGGDGGDTISGGD----GDDYIEGGLGNDSLTTGLGNDTLI----GGEGDDTLRNSAGDD 629
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G N +I +++ G SG D + G + N++ +G+DV G + DTF
Sbjct: 630 SLVGGVGNDSIVATDGNDTLEGGSGADTMYGGNDNDLLAGGTGDDVMHGEADSDTFLMED 689
Query: 312 PSYLYKIYR----------------------FENAIIVYDANEHKQDFLSDVERLRFADQ 349
+ + + S++ERL + Q
Sbjct: 690 SFGNDTLTGGEAGVDFDTVDFSSLSNGLSVTYTGNEAGTVTDGTDTVTFSEIERLILSGQ 749
Query: 350 CIDSVNV--KQRSILEYTASYEDLIQVIGQDVFESMKHFYEF------GLSEGRDITFDS 401
++ A + + G D + E G+ D
Sbjct: 750 ADVVDGSADGGGLSIDAGAGDDTITMGSGDDSITLGDGYDELVLTTSGGIDTVTDFNISD 809
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
G Y+D +V G G + + + AL E L+
Sbjct: 810 DDSDGFYNDQLDVSGLIGGTGSGGAVRTQDVSVSDDGFGNALLTFPGGEQLVLQGVAPAQ 869
Query: 462 LVQVGKDHFSN 472
+ + H +
Sbjct: 870 ISSHAQLHSAG 880
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 46/327 (14%), Positives = 78/327 (23%), Gaps = 32/327 (9%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFD----KADVWRYGIGKGTILSHNALHE 127
E S I+F + +D G G +
Sbjct: 382 EFEDRSSIEFTLQTRDGYSGFTLSGDVIDDPVLTPIEQGSDTVMAGEGDDVVYGQGGNDS 441
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ G G + G D +D G + +
Sbjct: 442 LMGEEGDDSLDGGEGDDVMDGGVGADTLMGGAGGDTLSGGEGDDYIDGGEG--DDFLSTG 499
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNY 242
I + G +L N+ + +I + G+D L D T+ GG N
Sbjct: 500 IGNDTLVGGEGNDTLHNSA--GDDSLVGGVGNDSIVATDGNDTLEGGIGDDTMFGGNDND 557
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + G + T+ +++ G G+D + G N+ GND G
Sbjct: 558 SLDGGDGADVLDGGAGSDTLIGGDGGDTISGGDGDDYIEGGLGNDSLTTGLGNDTLIGGE 617
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT + + + D +
Sbjct: 618 GDDTLR--NSAGDDSLVGGVGNDSIVA-----------------TDGNDTLEGGSGADTM 658
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEF 389
+ L G DV F
Sbjct: 659 YGGNDNDLLAGGTGDDVMHGEADSDTF 685
>gi|33595034|ref|NP_882677.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
parapertussis 12822]
gi|33565110|emb|CAE40062.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
parapertussis]
Length = 1740
Score = 94.9 bits (234), Expect = 4e-17, Method: Composition-based stats.
Identities = 65/492 (13%), Positives = 119/492 (24%), Gaps = 63/492 (12%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S D+ + G TI + LGL +G D
Sbjct: 1172 GSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 1231
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + G Y + +
Sbjct: 1232 SDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMGYY--DSVR 1289
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
I G + + +++ G + T+ + + G
Sbjct: 1290 SVENVI-----------------GTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFG 1332
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----- 328
GND++ G++ N+ + G+D +G +G D F + V
Sbjct: 1333 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAG 1392
Query: 329 ---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+A D +S +E + + Q ++
Sbjct: 1393 AHAGVATGRIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANV 1452
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L + L G DV + + GRD + + D N G+
Sbjct: 1453 LRGAGGADVLAGGEGDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANA-GNLLDG 1511
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ GR DA +++ + A H N V
Sbjct: 1512 GDGNDTVDFSGPGRGLDAGAKGVFLSLGKG--FASLMDEPETSNVLRHIENAVGSVRDDV 1569
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
D + G + L A ++DL
Sbjct: 1570 LI---------GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQG 1620
Query: 542 DAPDLVQAGKDH 553
D L AG H
Sbjct: 1621 DDTYLFGAGYGH 1632
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 93/374 (24%), Gaps = 38/374 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYN 141
+ T D D+ G G + + LG L +
Sbjct: 1305 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGND 1364
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++D + Y A+ +++D+ A + GS
Sbjct: 1365 WFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLG-ILADLGAGRVDKLGEAGS 1423
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + I G + + + G E +
Sbjct: 1424 SAYDTVSGIENVVGTELADRI-------------TGDAQANVLRGAGGADVLAGGEGDDV 1470
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------ 313
+ + + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 1471 LLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAG 1530
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ L +E + + + ++L A + L
Sbjct: 1531 AKGVFLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSG 1590
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G DV + G D DL G D Y + E
Sbjct: 1591 GAGDDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGAGYGHDTIYE 1637
Query: 434 GRNPDAFKALEYIA 447
+ A
Sbjct: 1638 SGGGHDTIRINAGA 1651
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/365 (11%), Positives = 73/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 1169 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 1228
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 1229 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMGYYDSV 1288
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
VE + Q + + + L G D+
Sbjct: 1289 RSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 1348
Query: 390 GLSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 1349 YGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLGILA 1408
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 1409 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 1466
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G + L A + L D A G +
Sbjct: 1467 ----------GDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGND 1516
Query: 564 SITFN 568
++ F+
Sbjct: 1517 TVDFS 1521
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/382 (14%), Positives = 102/382 (26%), Gaps = 63/382 (16%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA--- 131
+ + +F + + DV R G G T+ A G A
Sbjct: 1342 DAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGR 1401
Query: 132 LGLMHPGSYNGGYPV-YGVDNDYENDSFLTSVMSYFMP--QDSMMDASFGYCATPMVSDI 188
+GL G G D+ DA +D+
Sbjct: 1402 IGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 1461
Query: 189 VA----------------------VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
+A ++YG G++ + + +
Sbjct: 1462 LAGGEGDDVLLGGEGDDQLSGDAGRDRLYGE----AGDD-WFFQDAANAGNLLD---GGD 1513
Query: 227 GDDLLDLTLIGGV------KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
G+D +D + G ++ L S + E + + IE+ VGS +DV+
Sbjct: 1514 GNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRH---IENAVGSVRDDVL 1570
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
IG++ NV +GNDV G +G D + ++
Sbjct: 1571 IGDAGANVLNGLAGNDVLSGGAGDD--VLLGDEGSDLLSGDAGNDDLFGGQGDDTYLF-- 1626
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGRDITF 399
+I E ++ + G D + + G D
Sbjct: 1627 ------------GAGYGHDTIYESGGGHDTIRINAGADQLWFARQGNDLEIRILGTDDAL 1674
Query: 400 DS-YLYLGSYDDLRNVFGSDRG 420
Y + + + +++
Sbjct: 1675 TVHDWYRDADHRVEAIHAANQA 1696
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 47/176 (26%), Gaps = 29/176 (16%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVF-DGSSGL-DTFFYYAPSYLYKIYRFENAIIVY 328
V+G G+DVV+ N++ + +G + + G D+ A + + + N VY
Sbjct: 945 VIGGDGDDVVLANASRIHYDGGAGTNTVSYAALGRQDSITVSADGERFNVRKQLNNANVY 1004
Query: 329 ---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ D L V+ + +
Sbjct: 1005 REGVATQKTAYGKRTENVQYRHVELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDNF 1064
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L A + L G D + G D+ + D +
Sbjct: 1065 LAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDGGAGVDT 1120
>gi|113478121|ref|YP_724182.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101]
gi|110169169|gb|ABG53709.1| Na-Ca exchanger/integrin-beta4 [Trichodesmium erythraeum IMS101]
Length = 3427
Score = 94.9 bits (234), Expect = 4e-17, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 82/285 (28%), Gaps = 27/285 (9%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
S + D + G G + + + +G N + G
Sbjct: 1616 DGGSGNDQLYGGNGRDQLKGGSGNDKLYGEDKSDVLEGGMGNDELHGGNDNDVLKG---- 1671
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+S D G + + +YG + +
Sbjct: 1672 -----------------ESGKDTLRGGSGSDKLEGGEDHDHLYGESDSDKLEGG-QGDDY 1713
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
I G+D +L+G + I E ++ G N I + +
Sbjct: 1714 LNGGDGNDEIDGGKGND----SLVGDQGDDILYGREGNDTLKGDSGNDLIFGGVGNDILY 1769
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G+D + G N+ + SGND +G G D Y I + + +
Sbjct: 1770 GGTGDDYLDGGEGNDTIYPGSGNDTINGGEGNDLLVLSGAKSDYIITDTSTGKEITNKRD 1829
Query: 333 HKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + + +E + + Q ++ N + + + + G
Sbjct: 1830 NSKKIVFGIENISYEQIQQGNASNGPLANATVFIDTNSNFQLDKG 1874
Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/305 (15%), Positives = 85/305 (27%), Gaps = 30/305 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ Q GG+D +D GG + S+ G +
Sbjct: 1530 LPQNVSLGDGNQEYDGQGGNDTID----GGNGKDHLMGGVGNDSLKGGNDEDKLEGGAGH 1585
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRF 321
+ + G ND + GN ++ + GND+ DG SG D + S K+Y
Sbjct: 1586 DYLHGQRDNDFLYGNDHDDRLYGEDGNDMLDGGSGNDQLYGGNGRDQLKGGSGNDKLYGE 1645
Query: 322 ENAIIVYDA-------NEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + ++ + D L S + LR + L + + L
Sbjct: 1646 DKSDVLEGGMGNDELHGGNDNDVLKGESGKDTLRGGSGSDKLEGGEDHDHLYGESDSDKL 1705
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSD-----RGAA 422
G D E +G D D LY +D +
Sbjct: 1706 EGGQGDDYLNGGDGNDEIDGGKGNDSLVGDQGDDILYGREGNDTLKGDSGNDLIFGGVGN 1765
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
Y G + + + ++ + + ++ K + G+ +T
Sbjct: 1766 DILYGGTGDDYLDGGEGNDTIYPGSGNDTINGGEGNDLLVLSGAKSDYIITDTSTGKEIT 1825
Query: 483 FDSYL 487
Sbjct: 1826 NKRDN 1830
Score = 91.4 bits (225), Expect = 5e-16, Method: Composition-based stats.
Identities = 39/309 (12%), Positives = 79/309 (25%), Gaps = 31/309 (10%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G N TI + ++G GND + G + + +G+D G D
Sbjct: 1537 GDGNQEYDGQGGNDTIDGGNGKDHLMGGVGNDSLKGGNDEDKLEGGAGHDYLHGQRDND- 1595
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F Y + ++Y + ++ + + Q L + L
Sbjct: 1596 -FLYGNDHDDRLYGEDGNDMLDGGSGNDQ--------LYGGNGRDQLKGGSGNDKLYGED 1646
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L +G D G+D GS D Y
Sbjct: 1647 KSDVLEGGMGNDELHGGNDNDVLKGESGKDTLRG-----GSGSDKLEGGEDHDHL----Y 1697
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ L ++++ + + G D +
Sbjct: 1698 GESDSDKLEGGQGDDYLNGGDGNDEIDGGKGNDSLVGDQGDDILYGREGNDTLKGD---- 1753
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
S +DL FG Y G + + + ++ + + +
Sbjct: 1754 ----SGNDLI--FGGVGNDIL--YGGTGDDYLDGGEGNDTIYPGSGNDTINGGEGNDLLV 1805
Query: 547 VQAGKDHFS 555
+ K +
Sbjct: 1806 LSGAKSDYI 1814
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 47/139 (33%), Gaps = 11/139 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ S + GGDD L D G + I+ N + G + IA
Sbjct: 2299 NDKLLGSYGDDMLKGKGGDDKLMGGQGKDTIQGGKGNDEIEGNFGE-DVLEGNAGDDVIA 2357
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + + G GND + GN+ ++ +SGND +G G D +
Sbjct: 2358 GGSEDDLIKGGPGNDFLDGNTGDDQLEGNSGNDQLEGGKGNDIL--KGNRDNDWLVGEAG 2415
Query: 324 AIIVYDANEHKQDFLSDVE 342
I+ D L E
Sbjct: 2416 EDILNGGP--GVDLLRGGE 2432
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 48/164 (29%), Gaps = 32/164 (19%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + IA + ++GS G+D++ G ++ G D G G D
Sbjct: 2286 GSFGDDEIAGQEKNDKLLGSYGDDMLKGKGGDDKLMGGQGKDTIQGGKGNDEI--EGNFG 2343
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ ++ +E +++ + L
Sbjct: 2344 EDVLEGNAGDDVIAGGSE--------------------------DDLIKGGPGNDFLDGN 2377
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNV 414
G D E + +G DI + +L + +D+ N
Sbjct: 2378 TGDDQLEGNSGNDQLEGGKGNDILKGNRDNDWLVGEAGEDILNG 2421
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 65/203 (32%), Gaps = 41/203 (20%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A K + + + + S GDD+L G + + + +I G
Sbjct: 2277 ATKNGIEETGSFGDDEIAGQEKNDKLLGSYGDDMLK----GKGGDDKLMGGQGKDTIQGG 2332
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N I + + + G++G+DV+ G S +++ GND DG++G D
Sbjct: 2333 KGNDEIEGNFGEDVLEGNAGDDVIAGGSEDDLIKGGPGNDFLDGNTGDD----------- 2381
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+L K IL+ + L+ G
Sbjct: 2382 --------------------------QLEGNSGNDQLEGGKGNDILKGNRDNDWLVGEAG 2415
Query: 377 QDVFESMKHFYEFGLSEGRDITF 399
+D+ EG D+ +
Sbjct: 2416 EDILNGGPGVDLLRGGEGADVFY 2438
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 7/135 (5%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+++Y+I+ + GG+D + ++ + + +I G + +
Sbjct: 3200 SEDDVYEIQPSTL-EDYPDGFQAKGGNDRVTGSMRS----DLISGGQGQDTISGNDGDDR 3254
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I ++ + G GND++ G + N+ F GND G G D +
Sbjct: 3255 IIGGPGVDYLYGKDGNDLLEGRTENDYLFGGPGNDALIGGQGRDKL--NGGQGSDFLIGG 3312
Query: 322 ENAIIVYDANEHKQD 336
+ A + D
Sbjct: 3313 ASKDKFIFATNEEFD 3327
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 72/262 (27%), Gaps = 21/262 (8%)
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL---EYIA 447
E + FDS L ++L + FG ++ +E + +
Sbjct: 3154 YGEIYERYFDSNLLPREQNELFSNFGLQYALPLGSEVSPTEQEELGSEDDVYEIQPSTLE 3213
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ D A + + + G + D + + ++G D
Sbjct: 3214 DYPDGFQAKGGNDRVTGSMRSDLISGGQGQDTISGNDGDDRIIGGPGVDYLYGKDGNDLL 3273
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
EGR L ++ LI G D G F
Sbjct: 3274 ---------EGR--TENDYLFGGPGNDALIGGQGRDKLNGGQGSDFLI--GGASKDKFIF 3320
Query: 568 --NPDLYLTSY-DDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
N + + + D + F D T E ++ G ++ K+
Sbjct: 3321 ATNEEFDVEAIGSDTIDDFNPDDDIILLDKKTFTALESKSG--EGFSLETEFASVTKNVA 3378
Query: 625 KADLSLSFDHKKVDLYTDYFGD 646
++ + ++ L+ + G+
Sbjct: 3379 TSEALIVYNSNNGKLFYNENGN 3400
Score = 38.6 bits (88), Expect = 3.9, Method: Composition-based stats.
Identities = 18/168 (10%), Positives = 34/168 (20%), Gaps = 6/168 (3%)
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ I + A + K D L + L +
Sbjct: 2274 NNNATKNGIEETGSFGDDEIAGQEKNDKLLG------SYGDDMLKGKGGDDKLMGGQGKD 2327
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D E + G D+ N F +
Sbjct: 2328 TIQGGKGNDEIEGNFGEDVLEGNAGDDVIAGGSEDDLIKGGPGNDFLDGNTGDDQLEGNS 2387
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
G + L+ ++ L+ + G D +
Sbjct: 2388 GNDQLEGGKGNDILKGNRDNDWLVGEAGEDILNGGPGVDLLRGGEGAD 2435
>gi|159046409|ref|YP_001542080.1| RTX toxins and related Ca2+-binding protein-like protein
[Dinoroseobacter shibae DFL 12]
gi|157914168|gb|ABV95599.1| hemolysin-type calcium-binding repeat protein [Dinoroseobacter shibae
DFL 12]
Length = 1164
Score = 94.9 bits (234), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/244 (18%), Positives = 74/244 (30%), Gaps = 16/244 (6%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G I + G+ + I +++ G + +D++ GN+ ++ SGND
Sbjct: 838 GNAGVNILRGRAGNDRLMGHGGDDWIEGGIGADTLEGGADDDLLFGNAGHDTLLGQSGND 897
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDS 353
+G++G D S + + + E D L + + L D
Sbjct: 898 FLEGNAGNDLIR--GGSGHDWLTGGQGNDHLL--GEIGDDILWGLGGSDTLEGGDGADQL 953
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYD 409
L A + L +G D + EG D F D L + +
Sbjct: 954 EGGDANDWLFGDAGNDTLNGGVGFDWLDGGDGNDILTGLEGFDSLFGGAGDDSLSGNAGN 1013
Query: 410 DLRNVFGSDRGAAARHYIT-----HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
DL D I G R F L A ++ L + +
Sbjct: 1014 DLIEGGAGDDTLQGGQGIDVLRGGAGNDLIRGQTGFDELFGGAGNDTLQGGEGNDRLAGE 1073
Query: 465 VGKD 468
G D
Sbjct: 1074 AGND 1077
Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/242 (14%), Positives = 61/242 (25%), Gaps = 25/242 (10%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + T+ DDLL G + L + G N I +
Sbjct: 858 GGDDWIEGGIGADTLEGGADDDLL----FGNAGHDTLLGQSGNDFLEGNAGNDLIRGGSG 913
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G GND ++G +++ + G+D +G G D ++ +
Sbjct: 914 HDWLTGGQGNDHLLGEIGDDILWGLGGSDTLEGGDGADQL--EGGDANDWLFGDAGNDTL 971
Query: 328 YDA-------NEHKQDFLSDVE------------RLRFADQCIDSVNVKQRSILEYTASY 368
D L+ +E L L+
Sbjct: 972 NGGVGFDWLDGGDGNDILTGLEGFDSLFGGAGDDSLSGNAGNDLIEGGAGDDTLQGGQGI 1031
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L G D+ F E G D + N + A
Sbjct: 1032 DVLRGGAGNDLIRGQTGFDELFGGAGNDTLQGGEGNDRLAGEAGNDVLTGGIGADVFVFD 1091
Query: 429 HG 430
G
Sbjct: 1092 AG 1093
Score = 91.8 bits (226), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 62/245 (25%), Gaps = 22/245 (8%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G+ G++ + + I G D L GG N L + G
Sbjct: 883 GNAGHDTLLGQSGNDFLEGNAGNDLIRGGSGHDWLT----GGQGNDHLLGEIGDDILWGL 938
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------Y 309
+ T+ + + G ND + G++ N+ G D DG G D
Sbjct: 939 GGSDTLEGGDGADQLEGGDANDWLFGDAGNDTLNGGVGFDWLDGGDGNDILTGLEGFDSL 998
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + + ++ L+ ++ ++
Sbjct: 999 FGGAGDDSLSGNAGNDLIEGGAGDDT--------LQGGQGIDVLRGGAGNDLIRGQTGFD 1050
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+L G D + + G D+ D +D
Sbjct: 1051 ELFGGAGNDTLQGGEGNDRLAGEAGNDVLTGGIGADVFVFDAGTDVITDFSLMVDRLALD 1110
Query: 430 GVKEG 434
G G
Sbjct: 1111 GAALG 1115
Score = 86.8 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 60/379 (15%), Positives = 99/379 (26%), Gaps = 54/379 (14%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + ES GSS +++ GN+ N+ +GND G G D + +
Sbjct: 818 ILPTVLQESFQGSSLEELLEGNAGVNILRGRAGNDRLMGHGGDD--WIEGGIGADTLEGG 875
Query: 322 ENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ +++ D L S + L L + L+ IG D
Sbjct: 876 ADDDLLF--GNAGHDTLLGQSGNDFLEGNAGNDLIRGGSGHDWLTGGQGNDHLLGEIGDD 933
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ + +G D + D N + G +
Sbjct: 934 ILWGLGGSDTLEGGDGADQLEGGDANDWLFGDAGNDTLNGGVGFDWLDGGDGNDILTGLE 993
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
F +L A + L + G D +
Sbjct: 994 GFDSLFGGAGDDSLSGNAGNDLIEGGAGDDTLQGGQGIDVLRGG---------------- 1037
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
G R F L A ++ L + +AG D G
Sbjct: 1038 --------------AGNDLIRGQTGFDELFGGAGNDTLQGGEGNDRLAGEAGND--VLTG 1081
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
F+ D+ F A +G ALGI+G+ +V+
Sbjct: 1082 GIGADVFVFDAG------TDVITDFSLMVDRLAL--------DGAALGIAGLDGATVLER 1127
Query: 619 SEKSRDKADLSLSFDHKKV 637
RD + L F+
Sbjct: 1128 FS-QRDAEGVQLRFETGDG 1145
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 81/285 (28%), Gaps = 8/285 (2%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
++ + + D G I + + G H
Sbjct: 871 TLEGGADDDLLFGNAGHDTLLGQSGNDFLEGNAGNDLIRGGSGHDWLTGGQGNDHLLGEI 930
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G ++G+ D+ + + D FG ++ V + G
Sbjct: 931 GDDILWGLGGS---DTLEGGDGADQLEGGDANDWLFGDAGNDTLNGGVGFDWLDGGDGND 987
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + + ++ + G+DL++ GG + + + G N
Sbjct: 988 ILTGLEGFDS-LFGGAGDDSLSGNAGNDLIE----GGAGDDTLQGGQGIDVLRGGAGNDL 1042
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I T + + G +GND + G N+ +GNDV G G D F + A + + +
Sbjct: 1043 IRGQTGFDELFGGAGNDTLQGGEGNDRLAGEAGNDVLTGGIGADVFVFDAGTDVITDFSL 1102
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ D L L Q + +
Sbjct: 1103 MVDRLALDGAALGIAGLDGATVLERFSQRDAEGVQLRFETGDGLD 1147
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 51/314 (16%), Positives = 93/314 (29%), Gaps = 20/314 (6%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI-- 128
+E+ S ++ + N V R + + D GIG T+ +
Sbjct: 824 QESFQGSSLEELLEGNAGVNILRGRAGNDRLMGHGGDDWIEGGIGADTLEGGADDDLLFG 883
Query: 129 --GHALGLMHPG----SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
GH L G N G + + ++ + + G T
Sbjct: 884 NAGHDTLLGQSGNDFLEGNAGNDLIRGGSGHDWLTGGQGNDHLLGEIGDDILWGLGGSDT 943
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIG 237
D + A G+ + G+D+L +L G
Sbjct: 944 LEGGDGADQLEGGDANDWLFGD---AGNDTLNGGVGFDWLDGGDGNDILTGLEGFDSLFG 1000
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G + I G + T+ I+ + G +GND++ G + + F +GND
Sbjct: 1001 GAGDDSLSGNAGNDLIEGGAGDDTLQGGQGIDVLRGGAGNDLIRGQTGFDELFGGAGNDT 1060
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK--QDFLSDVERLRFADQCIDSVN 355
G G D + + A + DF V+RL +
Sbjct: 1061 LQGGEGNDRL--AGEAGNDVLTGGIGADVFVFDAGTDVITDFSLMVDRLALDGAALGIAG 1118
Query: 356 VKQRSILEYTASYE 369
+ ++LE + +
Sbjct: 1119 LDGATVLERFSQRD 1132
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDD---LLDLTLIGGVKNYIDLNTESWSSIGGYE 257
++ + ++ ++ + T + D ++L+ + I S +
Sbjct: 449 TVDDPVFNFSDTLDETSVLATRHSIQHWDEGFTVNLSQNYELVRVI------ASKQSPGK 502
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
N+ + +++ G G+D + GN+ ++ F ++G D+ G +G DT
Sbjct: 503 GNLHLWGSDAGDALQGGGGSDTLEGNAGTDMLFGANGGDILRGGAGDDTL 552
Score = 39.4 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 45/155 (29%), Gaps = 15/155 (9%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN- 283
G+ L + G ++ G + + + G +G+D ++G
Sbjct: 501 GKGNLHLWGSDAGDALQ----GGGGSDTLEGNAGTDMLFGANGGDILRGGAGDDTLLGEA 556
Query: 284 --------SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
++ + G D G +G D F A I+ F D +
Sbjct: 557 GDDDLQGGDGADILHDGDGRDDLRGGTGADLFVLAADGLEDVIWDFNPEEDQLDLSA--W 614
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
L ++ F + + +L +S
Sbjct: 615 TTLRATSQITFEATSTGARLLHGNEVLILHSSGGT 649
>gi|329848956|ref|ZP_08263984.1| glycosyl transferase group 1 family protein [Asticcacaulis
biprosthecum C19]
gi|328844019|gb|EGF93588.1| glycosyl transferase group 1 family protein [Asticcacaulis
biprosthecum C19]
Length = 1006
Score = 94.5 bits (233), Expect = 5e-17, Method: Composition-based stats.
Identities = 65/317 (20%), Positives = 97/317 (30%), Gaps = 65/317 (20%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDL 411
+ ++ A E++ H+ G +G + FD+ YL S DL
Sbjct: 8 TTYTVSDLFDFDAYRRYFETPPFATPEEALNHYNVEGWQKGLNPSTLFDTKFYLKSNPDL 67
Query: 412 RNVFGSDRGAAARHYITHGVKEGR------------NPDAFKALEYIASHEDLI---NAF 456
V G+ HY+ HG EGR +P E + H D
Sbjct: 68 HAV-----GSPLSHYLKHGQFEGRRRLSTVARTEALSPQGLTLYEKLKPHADPAYYFAQS 122
Query: 457 ADAPDLVQVGKDHFSNFG-CEEGRFVT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
H+ +G R FD+ YL D+ HY G
Sbjct: 123 GHPLACDVDPVMHYFAYGHGSRLRLTDKFDNQFYLDHNPDVARSG----QEPLIHYTRFG 178
Query: 515 VKE----GRNPDAF-----------------KALEYIASHEDLINAFADAPDLVQAGKDH 553
+E G P F +A Y + L AD H
Sbjct: 179 WREMRRSGPGPALFPLPPADAEKVTLIQQNMEAEYYQSKLPWLKETDADPA-------AH 231
Query: 554 FSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
+ FG G S+ F+ YL D+ + A HY+ G +EGR +G
Sbjct: 232 YLFFGERAGYDPSVDFSSAYYLQENGDVREM----GFNAYYHYLAFGAREGRQATPTG-- 285
Query: 612 FKSVMNLSEKSRDKADL 628
S + S+ + + D
Sbjct: 286 -YSALRASKITPEDFDD 301
Score = 77.9 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 71/231 (30%), Gaps = 31/231 (13%)
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ +H++ G ++G + FD+ YL S DL V G+ HY+ HG
Sbjct: 27 TPPFATPEEALNHYNVEGWQKGLNPSTLFDTKFYLKSNPDLHAV-----GSPLSHYLKHG 81
Query: 515 VKEGR------------NPDAFKALEYIASHEDLINAF---ADAPDLVQAGKDHFSNFG- 558
EGR +P E + H D F H+ +G
Sbjct: 82 QFEGRRRLSTVARTEALSPQGLTLYEKLKPHADPAYYFAQSGHPLACDVDPVMHYFAYGH 141
Query: 559 YEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKS--V 615
R F+ YL D+ HY G +E R G F
Sbjct: 142 GSRLRLTDKFDNQFYLDHNPDVAR----SGQEPLIHYTRFGWREMRRSGPGPALFPLPPA 197
Query: 616 MNLSEKSRDKADLSLSFDHKKVDLY-TDYFGDGNYYDSDLYSMHDINHDFS 665
+ + + K L TD +Y + +D + DFS
Sbjct: 198 DAEKVTLIQQNMEAEYYQSKLPWLKETDADPAAHYLFFGERAGYDPSVDFS 248
>gi|325140381|gb|EGC62902.1| iron-regulated protein FrpA [Neisseria meningitidis CU385]
Length = 1271
Score = 94.5 bits (233), Expect = 5e-17, Method: Composition-based stats.
Identities = 70/497 (14%), Positives = 132/497 (26%), Gaps = 71/497 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 707 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGR 766
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 767 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 826
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 827 VLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 882
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 883 IYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 942
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 943 SDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVT 1002
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 1003 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGD 1062
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D + + Y +G
Sbjct: 1063 DYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDALNGG 1113
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ L ++ LI + G D + EG ++ D
Sbjct: 1114 EGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG---EGFGQDTVYNYHVDKNSDTM- 1169
Query: 498 VFGSDRGAAARHYITHG 514
AA H+I G
Sbjct: 1170 -HFKGFKAADVHFIRSG 1185
>gi|86356374|ref|YP_468266.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Rhizobium etli CFN 42]
gi|86280476|gb|ABC89539.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Rhizobium etli CFN 42]
Length = 1797
Score = 94.5 bits (233), Expect = 5e-17, Method: Composition-based stats.
Identities = 76/530 (14%), Positives = 141/530 (26%), Gaps = 34/530 (6%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ S I E + R AL +S + E + F + N T
Sbjct: 438 DIYIVDSASDVINEAVGAGTDEIRTALAAYSIAALVNVENLTYTGSANFTGTGNALANTI 497
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ M AD G+G T + + + D
Sbjct: 498 TGGAGNDMLNGGAGADSLIGGLGDDTYIV-------------------DHAGDMVTEAAD 538
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ SY + D G A + +A GA +L + ++
Sbjct: 539 EGTDTVRTTLASYTLGSDLENLTYSGTVAFTGTGNSLANTIKGGAGADTL-DGKAGADML 597
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ I D GD + + G L S G + + +
Sbjct: 598 IGAAGNDTYIVDDAGDVVTEGLNEGTDWIKTAL----SSYTLGNNVENLLYTGSASFAGT 653
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-N 331
G++ + +IG N+ +GND +G +G D + + S + + A
Sbjct: 654 GNALANTIIGGVGNDTLDGGAGNDTLNGGAGNDIYIVDSASDVITEAVGAGTDEIRTALA 713
Query: 332 EHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ L +VE L + + + + A + L IG D +
Sbjct: 714 AYSIAALVNVENLTYTGSANFTGTGNALANTITGGAGNDVLNGGIGADSLIGGAGGDAYV 773
Query: 391 LSEGRDITFDSYL-YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+ D+ ++ + + + Y G D + +
Sbjct: 774 VDNAGDLVSEAADAGIDTIWTTLAAYTLGANVENLTYFGTAAFAGTGNDLANMITGGTAS 833
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEE-------GRFVTFDSYLYLGSYDDLRNVFGSD 502
+ L + G D + G VT + +
Sbjct: 834 DTLSGGVGNDTLNGGAGADRLIGGVGNDIYIVDNAGDIVTEAADEGTDTVQTTLAAHTLA 893
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
Y G + A+ + L + AG D
Sbjct: 894 ANVENLTYTGTAAFVGIGNSLDNTITGGAAADTLAGGDGNDTLNGGAGAD 943
Score = 88.7 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 66/556 (11%), Positives = 138/556 (24%), Gaps = 64/556 (11%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ S ITE + R AL +S + E + F + N T
Sbjct: 686 DIYIVDSASDVITEAVGAGTDEIRTALAAYSIAALVNVENLTYTGSANFTGTGNALANTI 745
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + AD G G + + + D
Sbjct: 746 TGGAGNDVLNGGIGADSLIGGAGGDAYVV-------------------DNAGDLVSEAAD 786
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ +Y + + FG A + +A G +L +
Sbjct: 787 AGIDTIWTTLAAYTLGANVENLTYFGTAAFAGTGNDLANMITGGTASDTLSGGV--GNDT 844
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGG------------------------VKNYIDLNTE 248
+ G+D+ + G +
Sbjct: 845 LNGGAGADRLIGGVGNDIYIVDNAGDIVTEAADEGTDTVQTTLAAHTLAANVENLTYTGT 904
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G + TI +++ G GND + G + + +G+D + + D
Sbjct: 905 AAFVGIGNSLDNTITGGAAADTLAGGDGNDTLNGGAGADRLIGGTGDDTYIVDNAGDLVT 964
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTAS 367
A + + ++ ++VE L + + + A
Sbjct: 965 EAADAGTDTVRTALSSYT----------LGNNVENLTYTGTASFSGAGNALANTITGGAG 1014
Query: 368 YEDLIQVIGQDVFESMKHFYEFGL-SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L G D + + + G +T + + + +
Sbjct: 1015 NDVLNGGAGADTLIGGAGHDTYIVDNAGDMVTEAADAGTDTVRTNLASYTLAGNVENLSF 1074
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
G G + + A+ + L + G D ++ V
Sbjct: 1075 AGTGTFAGTGNNLANTITGGAATDTLSGDAGNDTLDGGAGADSLIGGLGDDTYIVDHAGD 1134
Query: 487 LYLGSYDD-------LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
+ + D+ + Y G ++ A + L
Sbjct: 1135 MVTEAADEGTDTVRTTLASYTLGSDLENLTYSGTVAFTGTGNSLANTIKGGAGADTLDGK 1194
Query: 540 FADAPDLVQAGKDHFS 555
+ AG D +
Sbjct: 1195 AGADMLIGAAGNDTYI 1210
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 56/465 (12%), Positives = 116/465 (24%), Gaps = 57/465 (12%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ S ITE + R AL +S + E + F + N T
Sbjct: 1289 DIYIVDSASDVITEAVGAGTDEIRTALAAYSIAALVNVENLTYTGSANFTGTGNALANTI 1348
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + AD G G + + + D
Sbjct: 1349 TGGAGNDVLNGGIGADSLIGGAGGDAYVV-------------------DNAGDLVSEAAD 1389
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ +Y + + FG A + +A G +L +
Sbjct: 1390 AGIDTIWTTLAAYTLGANVENLTYFGTAAFAGTGNDLANMITGGTASDTLSGGV--GNDT 1447
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGG------------------------VKNYIDLNTE 248
+ G+D+ + G +
Sbjct: 1448 LNGGAGADRLIGGVGNDIYIVDNAGDIVTEAADEGTDTVQTTLAAHTLAANVENLTYTGT 1507
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G + TI +++ G GND + G + + +G+D + + D
Sbjct: 1508 AAFVGIGNSLDNTITGGAAADTLAGGDGNDTLNGGAGADRLIGGTGDDTYIVDNAGDLVT 1567
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTAS 367
A + + ++ ++VE L + + + A
Sbjct: 1568 EAADAGTDTVRTALSSYT----------LGNNVENLTYTGTASFSGAGNALANTITGGAG 1617
Query: 368 YEDLIQVIGQDVFESMKHFYEFGL-SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L G D + + + G +T + + + +
Sbjct: 1618 NDVLNGGAGADTLIGGAGHDTYIVDNAGDMVTEAADAGTDTVRTNLAAYTLGTNVENLTF 1677
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
I G + + L + + D F
Sbjct: 1678 IGTAAFAGTGNTLNNVIVGGSGSNMLTGGAGNDILIGGAAADVFV 1722
Score = 79.1 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 65/566 (11%), Positives = 127/566 (22%), Gaps = 50/566 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + R L ++ DL E + + F + N T
Sbjct: 1125 DTYIVDHAGDMVTEAADEGTDTVRTTLASYTLGSDL--ENLTYSGTVAFTGTGNSLANTI 1182
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + AD+ G T + + V +
Sbjct: 1183 KGGAGADTLDGKAGADMLIGAAGNDTYIV-------------------DDAGDVVTEGLN 1223
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D T++ SY + + G + + +A I G +L
Sbjct: 1224 EGTDWIKTALSSYTLGNNVENLLYTGSASFAGTGNALANTIIGGVGNDTLDGGA--GNDT 1281
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
D++ +G + I ++S + +
Sbjct: 1282 LNGGAGNDIYIVDSASDVI-TEAVGAGTDEIRTALAAYSIAALVNVENLTYTGSANFTGT 1340
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++ + + G + N+V G D G +G D + L ++
Sbjct: 1341 GNALANTITGGAGNDVLNGGIGADSLIGGAGGDAYVVDNAGDLVSEAADAGIDTIWTTLA 1400
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ F +++ + + L +G D
Sbjct: 1401 AYTLGANVENLTYFGTAAFAGTGNDLANMITGGTASDTLSGGVGNDTLNGGAGADRLIGG 1460
Query: 393 EGRDITF-DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
G DI D+ + + AA + A +
Sbjct: 1461 VGNDIYIVDNAGDIVTEAADEGTDTVQTTLAAHTLAANVENLTYTGTAAFVGIGNSLDNT 1520
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD-----DLRNVFGSDRGAA 506
+ A G D + + Y+ + + A
Sbjct: 1521 ITGGAAADTLAGGDGNDTLNGGAGADRLIGGTGDDTYIVDNAGDLVTEAADAGTDTVRTA 1580
Query: 507 ARHYITHGVKEGRNPDA--------------------FKALEYIASHEDLINAFADAPDL 546
Y E L A + LI +
Sbjct: 1581 LSSYTLGNNVENLTYTGTASFSGAGNALANTITGGAGNDVLNGGAGADTLIGGAGHDTYI 1640
Query: 547 VQAGKDHFSNFGYEEGRSITFNPDLY 572
V D + ++ N Y
Sbjct: 1641 VDNAGDMVTEAADAGTDTVRTNLAAY 1666
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 73/572 (12%), Positives = 143/572 (25%), Gaps = 45/572 (7%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + R L ++ ++ E S F + N T
Sbjct: 1034 DTYIVDNAGDMVTEAADAGTDTVRTNLASYTLAGNV--ENLSFAGTGTFAGTGNNLANTI 1091
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D G G +++ + + D
Sbjct: 1092 TGGAATDTLSGDAGNDTLDGGAGADSLIGGLGDD----------TYIVDHAGDMVTEAAD 1141
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ SY + D G A + +A GA +L + ++
Sbjct: 1142 EGTDTVRTTLASYTLGSDLENLTYSGTVAFTGTGNSLANTIKGGAGADTL-DGKAGADML 1200
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ I D GD + + G L S G + + +
Sbjct: 1201 IGAAGNDTYIVDDAGDVVTEGLNEGTDWIKTAL----SSYTLGNNVENLLYTGSASFAGT 1256
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-N 331
G++ + +IG N+ +GND +G +G D + + S + + A
Sbjct: 1257 GNALANTIIGGVGNDTLDGGAGNDTLNGGAGNDIYIVDSASDVITEAVGAGTDEIRTALA 1316
Query: 332 EHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ L +VE L + + + + A + L IG D +
Sbjct: 1317 AYSIAALVNVENLTYTGSANFTGTGNALANTITGGAGNDVLNGGIGADSLIGGAGGDAYV 1376
Query: 391 LSEGRDITFDSYL-YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+ D+ ++ + + + Y G D + +
Sbjct: 1377 VDNAGDLVSEAADAGIDTIWTTLAAYTLGANVENLTYFGTAAFAGTGNDLANMITGGTAS 1436
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCE-------------EGRFVTFDSYLYLGSYDDLR 496
+ L + G D E D+ + L
Sbjct: 1437 DTLSGGVGNDTLNGGAGADRLIGGVGNDIYIVDNAGDIVTEAADEGTDTVQTTLAAHTLA 1496
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDA------------FKALEYIASHEDLINAFADAP 544
+ ++ G L A + LI D
Sbjct: 1497 ANVENLTYTGTAAFVGIGNSLDNTITGGAAADTLAGGDGNDTLNGGAGADRLIGGTGDDT 1556
Query: 545 DLVQAGKDHFSNFGYEEGRSITFNPDLYLTSY 576
+V D + ++ Y
Sbjct: 1557 YIVDNAGDLVTEAADAGTDTVRTALSSYTLGN 1588
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 62/534 (11%), Positives = 130/534 (24%), Gaps = 25/534 (4%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + + AL ++ + E F + N T
Sbjct: 1207 DTYIVDDAGDVVTEGLNEGTDWIKTALSSYT--LGNNVENLLYTGSASFAGTGNALANTI 1264
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D G G + +A I A+G
Sbjct: 1265 IGGVGNDTLDGGAGNDTLNGGAGNDIYIVDSASDVITEAVGAGTDEIRTALAAYSIAALV 1324
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ T ++ +++ + G +++ + + G G + Y ++
Sbjct: 1325 NVENLTYTGSANFTGTGNALANTITGGAGNDVLNGGIGADSLIGG----AGGDAYVVD-- 1378
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
++ + + G D + TL L + + + +
Sbjct: 1379 --NAGDLVSEAADAGIDTIWTTLAAYT-----LGANVENLTYFGTAAFAGTGNDLANMIT 1431
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G + +D + G N+ +G D G G D + + E V
Sbjct: 1432 GGTASDTLSGGVGNDTLNGGAGADRLIGGVGNDIYIVDNAGDIVTEAADEGTDTVQTTLA 1491
Query: 333 HKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
++VE L + + + + A+ + L G D
Sbjct: 1492 A-HTLAANVENLTYTGTAAFVGIGNSLDNTITGGAAADTLAGGDGNDTLNGGAGADRLIG 1550
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG-RNPDAFKALEYIASHE 450
G D + + R A + + + + V+ A + A
Sbjct: 1551 GTGDDTYIVDNAGDLVTEAADAGTDTVRTALSSYTLGNNVENLTYTGTASFSGAGNALAN 1610
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEE-------GRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ + G D + G VT + + +
Sbjct: 1611 TITGGAGNDVLNGGAGADTLIGGAGHDTYIVDNAGDMVTEAADAGTDTVRTNLAAYTLGT 1670
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+I G + + L + + A D F
Sbjct: 1671 NVENLTFIGTAAFAGTGNTLNNVIVGGSGSNMLTGGAGNDILIGGAAADVFVYS 1724
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 58/541 (10%), Positives = 127/541 (23%), Gaps = 43/541 (7%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + R AL ++ + E + F + N T
Sbjct: 952 DTYIVDNAGDLVTEAADAGTDTVRTALSSYT--LGNNVENLTYTGTASFSGAGNALANTI 1009
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + AD G G T + + + D
Sbjct: 1010 TGGAGNDVLNGGAGADTLIGGAGHDTYIV-------------------DNAGDMVTEAAD 1050
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ SY + + + G + +A GA +L +
Sbjct: 1051 AGTDTVRTNLASYTLAGNVENLSFAGTGTFAGTGNNLANTITGGAATDTLSGDA--GNDT 1108
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIG---------------GVKNYIDLNTESWSSIGGYE 257
++ GDD + G L ++ +
Sbjct: 1109 LDGGAGADSLIGGLGDDTYIVDHAGDMVTEAADEGTDTVRTTLASYTLGSDLENLTYSGT 1168
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
T +++ ++ G +G D + G + ++ ++GND + D
Sbjct: 1169 VAFTGTGNSLANTIKGGAGADTLDGKAGADMLIGAAGNDTYIVDDAGDVVTEGLNEGTDW 1228
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
I ++ + + E+ S + L+ A + L G
Sbjct: 1229 IKTALSSYTLGNNVENLLYTGSASFAGTGNALANTIIGGVGNDTLDGGAGNDTLNGGAGN 1288
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D++ + G + + ++ G
Sbjct: 1289 DIYIVDSASDVITEAVGAGTDEIRTALAAYSIAALVNVENLTYTGSANFTGTGNALANTI 1348
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ + + + + E D+ + L
Sbjct: 1349 TGGAGNDVL--NGGIGADSLIGGAGGDAYVVDNAGDLVSEAADAGIDTIWTTLAAYTLGA 1406
Query: 498 VFGSDRGAAARHYITHGVKEGR---NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ + G A L ++ L + G D +
Sbjct: 1407 NVENLTYFGTAAFAGTGNDLANMITGGTASDTLSGGVGNDTLNGGAGADRLIGGVGNDIY 1466
Query: 555 S 555
Sbjct: 1467 I 1467
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 62/530 (11%), Positives = 130/530 (24%), Gaps = 19/530 (3%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
DV + + E + R + WS + E + F N
Sbjct: 8 DVYIADNGNDAVIENANEGTDTVRTTV--WSYTLGANVENLTYIGTGTFAGGGNAADNVI 65
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ AD G G + + A G +
Sbjct: 66 TGGTGSDRLDGKAGADTLIGGAGDDQYTVDSLNDVVIEAAGGGVDTIWTDLNTYSLAGIA 125
Query: 153 YEND---SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ S + D+++ G + G G
Sbjct: 126 NIENLSFSGGGNSTGTGNSLDNIIKGGTGNDTLSGGVGNDTLIGGLGTDTLIGGTGNDTY 185
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM--TIAQHTV 267
V I+ + + + N +L + G N+ TI
Sbjct: 186 VVGDNGDTIIENVDEGIDTVQTTMWAYTLSANVENLIYSWIGAFAGTGNNLDNTITGGAA 245
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G +GND + G + + F +GND + + D A + + + ++ +
Sbjct: 246 SDTLSGGAGNDTLDGGAGADSLFGGAGNDTYIVDNAGDLVTEAADAGIDTVRTTLSSYV- 304
Query: 328 YDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
S+VE L + + + ++ A + L G D+
Sbjct: 305 ---------LGSNVENLTYTGMAAVVGTGNNLANTIKGAAGADILDGKAGADILIGGVGD 355
Query: 387 YEFGLSEGRDITFD-SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
+ + + D+ + + +G +I G G +
Sbjct: 356 DTYIVDDVADVVTERPNEGADLTKTTLSSYGLTNNVENLTFIGSGDFAGTGNRLANTITG 415
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
A ++ L + G D + + + +
Sbjct: 416 GAGNDTLDGGAGNDTLNGGAGNDIYIVDSASDVINEAVGAGTDEIRTALAAYSIAALVNV 475
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
Y G + A ++ L + G D +
Sbjct: 476 ENLTYTGSANFTGTGNALANTITGGAGNDMLNGGAGADSLIGGLGDDTYI 525
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 47/351 (13%), Positives = 95/351 (27%), Gaps = 33/351 (9%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE + + L + ++ E + F+ N T
Sbjct: 1464 DIYIVDNAGDIVTEAADEGTDTVQTTLAAHTLAANV--ENLTYTGTAAFVGIGNSLDNTI 1521
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D D G G ++ + + D
Sbjct: 1522 TGGAAADTLAGGDGNDTLNGGAGADRLIGGTGDD----------TYIVDNAGDLVTEAAD 1571
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ SY + + G + + +A GA
Sbjct: 1572 AGTDTVRTALSSYTLGNNVENLTYTGTASFSGAGNALANTITGGA-----------GNDV 1620
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
T+ G D + + ++ T+ + + +
Sbjct: 1621 LNGGAGADTLIGGAGHDTYIVDN--AGDMVTEAADAGTDTVRTNLAAYTLGTNVENLTFI 1678
Query: 273 GSSG--------NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G++ N+V++G S +N+ +GND+ G + D F Y A I F
Sbjct: 1679 GTAAFAGTGNTLNNVIVGGSGSNMLTGGAGNDILIGGAAADVFVYSANWGHDTITNFVAT 1738
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+DA +D E L A + + + + +
Sbjct: 1739 GSAHDAISIDHGIFADWEALFAATEQSGNDTIIIADSDNTITLRNVALSSL 1789
Score = 38.2 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 33/277 (11%), Positives = 62/277 (22%), Gaps = 10/277 (3%)
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+G+DV+ +G D A + + + E+ +
Sbjct: 1 MSGGAGDDVYIADNGNDAVIENANEGTDTVRTTVWSYTLGANVENLTYIGTGTFAGGGNA 60
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT---FDSYLYL 405
L+ A + LI G D + + G + D Y
Sbjct: 61 ADNVITGGTGSDRLDGKAGADTLIGGAGDDQYTVDSLNDVVIEAAGGGVDTIWTDLNTYS 120
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ G + + L ++ LI +
Sbjct: 121 LAGIANIENLSFSGGGNSTGTGNSLDNIIKGGTGNDTLSGGVGNDTLIGGLGTDTLIGGT 180
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF- 524
G D + + D + ++ +I G N D
Sbjct: 181 GNDTYVVGDNGDTIIENVDEGIDTVQTTMWAYTLSANVENLIYSWIGAFAGTGNNLDNTI 240
Query: 525 ------KALEYIASHEDLINAFADAPDLVQAGKDHFS 555
L A ++ L AG D +
Sbjct: 241 TGGAASDTLSGGAGNDTLDGGAGADSLFGGAGNDTYI 277
>gi|110680257|ref|YP_683264.1| iron-regulated protein frpC, putative [Roseobacter denitrificans OCh
114]
gi|109456373|gb|ABG32578.1| iron-regulated protein frpC, putative [Roseobacter denitrificans OCh
114]
Length = 2666
Score = 94.1 bits (232), Expect = 6e-17, Method: Composition-based stats.
Identities = 55/312 (17%), Positives = 95/312 (30%), Gaps = 34/312 (10%)
Query: 186 SDIVAVQKIYGAPKGSLGNNI------YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
D +A+ + G +G++ + + + T+ G+D L+ GG
Sbjct: 2280 GDPIALGGL-GTDDTVIGHDGNDQLFGFGGKDRILGLEGDDTLSGGSGNDRLN----GGD 2334
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
N + G + T+ + ++GS GND + G + N++ +GNDV +
Sbjct: 2335 GNDAIEGGAGDDILFGKAGDDTLDGGAGDDELIGSDGNDEINGEAGNDILRGGAGNDVIE 2394
Query: 300 GSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHK----------QDFLSDVE 342
G +G DT F + + I+ + D +
Sbjct: 2395 GGAGDDTVFGGNDEDIINGGVGDDMLGGNGGSDIINGGSGDDMLIGGLDGDVLDGGDGAD 2454
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT---- 398
LR ++ + + + L G DV G DI
Sbjct: 2455 ELRGGGGDDTLWGGDGDDLMFGSFNDDVLYGGAGDDVLNGNTQVDALFGEAGNDILRGGD 2514
Query: 399 -FDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
FDS D L G D + I G + +A + DLI+ F
Sbjct: 2515 GFDSLDGGTGNDTLEGGNGKDVLNGGSGQDILRGQAQNDTFVFAEASDSAFGSADLIDGF 2574
Query: 457 ADAPDLVQVGKD 468
D
Sbjct: 2575 EGVGVRGGDLID 2586
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/335 (17%), Positives = 92/335 (27%), Gaps = 54/335 (16%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + ++V+G GND + G + G+D G SG D
Sbjct: 2283 IALGGLGTDDTVIGHDGNDQLFGFGGKDRILGLEGDDTLSGGSGND-------------- 2328
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
RL D IL A + L G D
Sbjct: 2329 -----------------------RLNGGDGNDAIEGGAGDDILFGKAGDDTLDGGAGDDE 2365
Query: 380 FESMKHFYEFGLSEGRDIT-----FDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGV 431
E G DI D D + D G +G
Sbjct: 2366 LIGSDGNDEINGEAGNDILRGGAGNDVIEGGAGDDTVFGGNDEDIINGGVGDDMLGGNGG 2425
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYL 489
+ N + + D+++ A +L G D G + D LY
Sbjct: 2426 SDIINGGSGDDMLIGGLDGDVLDGGDGADELRGGGGDDTLWGGDGDDLMFGSFNDDVLYG 2485
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
G+ DD+ N G+ + A + G R D F +L+ ++ L +
Sbjct: 2486 GAGDDVLN--GNTQVDAL--FGEAGNDILRGGDGFDSLDGGTGNDTLEGGNGKDVLNGGS 2541
Query: 550 GKDHFSNFGYEEGRSITFNPDLYLT-SYDDLWNVF 583
G+D G + + F DL + F
Sbjct: 2542 GQD--ILRGQAQNDTFVFAEASDSAFGSADLIDGF 2574
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/250 (14%), Positives = 68/250 (27%), Gaps = 15/250 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG- 133
+ + + D G G ++ + EI G
Sbjct: 2322 SGGSGNDRLNGGDGNDAIEGGAGDDILFGKAGDDTLDGGAGDDELIGSDGNDEINGEAGN 2381
Query: 134 --LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
L + G D + + S D + +
Sbjct: 2382 DILRGGAGNDVIEGGAGDDTVFGGNDEDIINGGVGDDMLGGNGGSDIING--GSGDDMLI 2439
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLN 246
+ + + T++ GDDL+ D L GG + +
Sbjct: 2440 -----GGLDGDVLDGGDGADELRGGGGDDTLWGGDGDDLMFGSFNDDVLYGGAGDDVLNG 2494
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ G N + +S+ G +GND + G + +V SG D+ G + DT
Sbjct: 2495 NTQVDALFGEAGNDILRGGDGFDSLDGGTGNDTLEGGNGKDVLNGGSGQDILRGQAQNDT 2554
Query: 307 FFYYAPSYLY 316
F + S
Sbjct: 2555 FVFAEASDSA 2564
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 4/182 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + + G D + + I + ++ ++ G + +
Sbjct: 1019 GAGTDTLVASGVVDLQAGTGPDGVTFSGFEN----ITRVSGTFGTLLGDDGANRLQDSAG 1074
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ G G D+++G + N+V G DV DG +GLDT Y + I A ++
Sbjct: 1075 DGFLAGRGGADILLGEAGNDVLIGGLGADVLDGGAGLDTASYADSTTSIFIREVPGAQML 1134
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
E + D L D+ER+ + ++ I+E A + ++ G D
Sbjct: 1135 GFRGEAQGDVLIDIERIEGSAFNDLFRGGERSMIIEGGAGDDRIVAGGGNDTIFGQDGND 1194
Query: 388 EF 389
Sbjct: 1195 LL 1196
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/325 (15%), Positives = 85/325 (26%), Gaps = 22/325 (6%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + DL + I N + + +VG +G+D ++G ++ F
Sbjct: 806 DALQQTLDQANADLAAA--NVILASAGNPELRGTAQADVIVGLAGDDRLLGLEGDDTLFP 863
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL--RFADQ 349
G D DG G+DT + + + + VE +D
Sbjct: 864 GEGADTVDGGDGIDTVDFSDLTGAVLTSAHQGLLPAGARAGINVLLNDGVETAAEINSDG 923
Query: 350 CIDSVNVKQR-SILEYTASYEDLIQVIGQ-DVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ +V T + L + ++ G G D+ L
Sbjct: 924 TLGAVTEVSNVERWRLTDFADVLRLDLASPGDLAELRDVSTLG---GDDVV--EATGLFR 978
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
+ D G +I L +A L+ +
Sbjct: 979 REVTAPALNIDLGDGDDRFI-------VGDQNGSDLAQLAPGMTLLGGAGTDTLVASGVV 1031
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
D + G + F F + G D + G GR L
Sbjct: 1032 DLQAGTGPDGVTFSGF--ENITRVSGTFGTLLGDDGANRLQDSAGDGFLAGRGGA--DIL 1087
Query: 528 EYIASHEDLINAFADAPDLVQAGKD 552
A ++ LI AG D
Sbjct: 1088 LGEAGNDVLIGGLGADVLDGGAGLD 1112
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 50/301 (16%), Positives = 86/301 (28%), Gaps = 28/301 (9%)
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI-----GHALGLMHPGSYNGGYPVYGV 149
+ E+ AD YG G + A +I G AL + + PV+G
Sbjct: 1401 GTDRDDEMFGSAADEAFYGNGGDDYVEAAAGDDILGFGEGQALKNLTNPPGDTAVPVFGR 1460
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT-PMVSDIVAVQ------KIYGAPKGSL 202
+++ D + AT D ++G
Sbjct: 1461 QGGTIEPQNNPTILERLRTLDPDDAVAGASRATVTGDVDGAGNTRVDWGSFLWGGAGIDT 1520
Query: 203 GNNIY--KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-----KNYIDLNTESWSSIGG 255
+ + + D P + I D + N + G
Sbjct: 1521 LDLRFDRGLNFLPTDGPEARAIVDLDAAPTNTTINTFTGERVVYGTAVFTNPGEDETAPG 1580
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N T+ IE+V+G++ ND++ G++ +N G D DG G DT Y S
Sbjct: 1581 SYVNATLFG---IENVLGTANNDIISGDARDNRIEGGGGADTMDGRGGTDTASYALASEG 1637
Query: 316 YKIYRFENAIIVYDANE------HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ + V N D ER + + S++
Sbjct: 1638 VELNLVRDGAGVRLDNSGGGTGDAAGDTAVGFERFEGSGFADTVTLTGVVTTGTKNISFD 1697
Query: 370 D 370
Sbjct: 1698 V 1698
Score = 41.7 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 33/105 (31%), Gaps = 3/105 (2%)
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH---KQDFLSD 340
+++N F + +G D + + + Y + I ++ +D ++
Sbjct: 1336 ASSNDFVDGTGRDSLRTFIADNVSGVSSSDIVSTFYSSDIRSIGSLSSTDRVLSRDTFTN 1395
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
VE + D+ + + + G D+ +
Sbjct: 1396 VEGIIGTDRDDEMFGSAADEAFYGNGGDDYVEAAAGDDILGFGEG 1440
Score = 39.0 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 72/243 (29%), Gaps = 18/243 (7%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T +E ++G+ +D + G++A+ F+ + G+D + ++G D + L +
Sbjct: 1394 TNVEGIIGTDRDDEMFGSAADEAFYGNGGDDYVEAAAGDDILGFGEGQALKNLTNPPGDT 1453
Query: 326 IVYDANEHKQDFL-----SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
V + +ERLR D + ++ + G
Sbjct: 1454 AVPVFGRQGGTIEPQNNPTILERLRTLDPDDAVAGASRATVTGDVDGAGNTRVDWGS-FL 1512
Query: 381 ESMKHFYEFGLSEGRDITFDSYLY--LGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNP 437
L R + F + DL + + +G NP
Sbjct: 1513 WGGAGIDTLDLRFDRGLNFLPTDGPEARAIVDLDAAPTNTTINTFTGERVVYGTAVFTNP 1572
Query: 438 DAFKALEYIASHEDLIN-----AFADAPDLVQVGKDHFSNFGC----EEGRFVTFDSYLY 488
+ + L A+ + +D+ G +GR T +
Sbjct: 1573 GEDETAPGSYVNATLFGIENVLGTANNDIISGDARDNRIEGGGGADTMDGRGGTDTASYA 1632
Query: 489 LGS 491
L S
Sbjct: 1633 LAS 1635
>gi|134093314|ref|YP_001098389.1| putative Jacalin-related lectin family protein [Herminiimonas
arsenicoxydans]
gi|133737217|emb|CAL60260.1| conserved hypothetical protein; putative exported protein
[Herminiimonas arsenicoxydans]
Length = 949
Score = 94.1 bits (232), Expect = 7e-17, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 48/127 (37%), Gaps = 8/127 (6%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD Y D+ H+ +G EGR F A Y + D+ A
Sbjct: 681 FDWDYYYDKNPDVVAAKVDLPT----HWKDNGFNEGRQGSPEFSASYYWNRYTDVQAACP 736
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPD--LYLTSYDDLWNVFGSDR-SAAAQHYITHG 598
+Q H+ + G+E GR + + YL Y DL N FG D A H++ G
Sbjct: 737 TPSTKLQCALQHWLDDGFELGRQGSADVSIVSYLNRYPDLQNAFGVDNYDDAFDHWMNSG 796
Query: 599 MKEGRAL 605
EGR
Sbjct: 797 EDEGRNA 803
Score = 70.2 bits (170), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 15/140 (10%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDL 495
F Y + D++ A D P H+ + G EGR F + Y Y D+
Sbjct: 679 SVFDWDYYYDKNPDVVAAKVDLPT-------HWKDNGFNEGRQGSPEFSASYYWNRYTDV 731
Query: 496 RNVFGSDRGA---AARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGK 551
+ + A +H++ G + GR + Y+ + DL NAF
Sbjct: 732 QAACPTPSTKLQCALQHWLDDGFELGRQGSADVSIVSYLNRYPDLQNAFGVD--NYDDAF 789
Query: 552 DHFSNFGYEEGRSITFNPDL 571
DH+ N G +EGR+ +
Sbjct: 790 DHWMNSGEDEGRNARPDTSF 809
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRN 413
Y D++ + H+ + G +EGR F + Y Y D++
Sbjct: 678 ASVFDWDYYYDKNPDVVAA----KVDLPTHWKDNGFNEGRQGSPEFSASYYWNRYTDVQA 733
Query: 414 VFGSDRGA---AARHYITHGVKEGRNPDAFKAL-EYIASHEDLINAFADAPDLVQVGKDH 469
+ A +H++ G + GR A ++ Y+ + DL NAF DH
Sbjct: 734 ACPTPSTKLQCALQHWLDDGFELGRQGSADVSIVSYLNRYPDLQNAFGVD--NYDDAFDH 791
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYD 493
+ N G +EGR D+
Sbjct: 792 WMNSGEDEGRNARPDTSFAGPVNG 815
Score = 38.2 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 16/51 (31%), Gaps = 7/51 (13%)
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM 616
F+ D Y D+ H+ +G EGR +F +
Sbjct: 680 VFDWDYYYDKNPDVVAAKVD----LPTHWKDNGFNEGRQG---SPEFSASY 723
>gi|209527360|ref|ZP_03275868.1| allergen V5/TPX-1 related [Arthrospira maxima CS-328]
gi|209492218|gb|EDZ92565.1| allergen V5/TPX-1 related [Arthrospira maxima CS-328]
Length = 496
Score = 93.7 bits (231), Expect = 8e-17, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 64/208 (30%), Gaps = 11/208 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G G + + ++ G+D + + TL GG + L E
Sbjct: 224 GGNDTIFG---MGGDDNLEGGFGNNLLWGGEGNDFILGGPGNDTLYGGQGDDFLLGGEGN 280
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
I G N TI + + G G+D+++G NN + GND G G D F
Sbjct: 281 DVIWGDIGNDTIDGGEGDDLIFGGEGDDLILGGFGNNTIYGGQGNDTIHGGDGNDLIF-- 338
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID-SVNVKQRSILEYTASYE 369
+ + +Y ++ L + D V + L +
Sbjct: 339 GNQGADYLQGNQGNDTIYGGQDNDTLLGIAGNNLLLGNLGNDFLVGGLESDTLYGGQGND 398
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDI 397
LI G D K GRD
Sbjct: 399 TLIGGDGDDFLSGDKGNDLLIGGAGRDT 426
Score = 82.1 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/240 (16%), Positives = 67/240 (27%), Gaps = 3/240 (1%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
TL G + + T SI G N TI +++ G GN+++ G N+
Sbjct: 201 TLEGTEADDFKVGTSMAESIYGRGGNDTIFGMGGDDNLEGGFGNNLLWGGEGNDFILGGP 260
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCID 352
GND G G D F I+ + F + + L
Sbjct: 261 GNDTLYGGQGDD--FLLGGEGNDVIWGDIGNDTIDGGEGDDLIFGGEGDDLILGGFGNNT 318
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
+ + + + G D + + + D +L
Sbjct: 319 IYGGQGNDTIHGGDGNDLIFGNQGADYLQGNQGNDTIYGGQDNDTLLGIAGNNLLLGNLG 378
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
N F + Y G D L ++ LI + G+D ++
Sbjct: 379 NDFLVGGLESDTLYGGQGNDTLIGGDGDDFLSGDKGNDLLIGGAGRDTFAIAYGQDTIAD 438
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/249 (17%), Positives = 78/249 (31%), Gaps = 8/249 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + + ++IY GG+D + D L GG N + E I G N T+
Sbjct: 208 DDFKVGTSMAESIYGRGGNDTIFGMGGDDNLEGGFGNNLLWGGEGNDFILGGPGNDTLYG 267
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ ++G GNDV+ G+ N+ G+D+ G G D IY +
Sbjct: 268 GQGDDFLLGGEGNDVIWGDIGNDTIDGGEGDDLIFGGEGDDLIL--GGFGNNTIYGGQGN 325
Query: 325 IIVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
++ + + F + + L+ + L A L+ +G D
Sbjct: 326 DTIHGGDGNDLIFGNQGADYLQGNQGNDTIYGGQDNDTLLGIAGNNLLLGNLGNDFLVGG 385
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+G D D N I +G + +
Sbjct: 386 LESDTLYGGQGNDTLIGGDGDDFLSGDKGNDLLIGGAGRDTFAIAYGQDTIADLEVGVDQ 445
Query: 444 EYIASHEDL 452
+I + D
Sbjct: 446 IWITAALDP 454
Score = 53.3 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 51/143 (35%), Gaps = 17/143 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ TIY G+D + GG N + + + G + N TI
Sbjct: 306 GDDLILGGFGNNTIYGGQGNDTI----HGGDGNDLIFGNQGADYLQGNQGNDTIYGGQDN 361
Query: 269 ESVVG---------SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++++G + GND ++G ++ + GND G G D F +
Sbjct: 362 DTLLGIAGNNLLLGNLGNDFLVGGLESDTLYGGQGNDTLIGGDGDD--FLSGDKGNDLLI 419
Query: 320 RFENAIIVYDANEHKQDFLSDVE 342
A + QD ++D+E
Sbjct: 420 GGAGRDT--FAIAYGQDTIADLE 440
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 52/222 (23%), Gaps = 16/222 (7%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-- 399
E L + V + + + + G D E EG D
Sbjct: 200 ETLEGTEADDFKVGTSMAESIYGRGGNDTIFGMGGDDNLEGGFGNNLLWGGEGNDFILGG 259
Query: 400 --DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
+ LY G DD + + G + + + ++ F
Sbjct: 260 PGNDTLYGGQGDDFLLGGEGNDVI----WGDIGNDTIDGGEGDDLIFGGEGDDLILGGFG 315
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ G D + G YL ++G + +
Sbjct: 316 NNTIYGGQGNDT-IHGGDGNDLIFGNQGADYLQGNQGNDTIYGGQDNDTLLGIAGNNLLL 374
Query: 518 GRNPDAF-------KALEYIASHEDLINAFADAPDLVQAGKD 552
G + F L ++ LI D G D
Sbjct: 375 GNLGNDFLVGGLESDTLYGGQGNDTLIGGDGDDFLSGDKGND 416
>gi|307152890|ref|YP_003888274.1| family 2 glycosyl transferase [Cyanothece sp. PCC 7822]
gi|306983118|gb|ADN14999.1| glycosyl transferase family 2 [Cyanothece sp. PCC 7822]
Length = 880
Score = 93.7 bits (231), Expect = 8e-17, Method: Composition-based stats.
Identities = 50/252 (19%), Positives = 74/252 (29%), Gaps = 42/252 (16%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVF 415
Y + D + G HF G E R+ F++ YL
Sbjct: 66 LFDSAYYIENNPD-VAKSGIPPLI---HFIYHGAREKRNPHPLFNTEFYLKQIKT----- 116
Query: 416 GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
+ H+ G+ EG +P F Y+ + + + H+ G
Sbjct: 117 DLGQQNPLGHFCQVGIFEGLDPHPLFDTSYYLNRYSKQLPQNINP-------LVHYLQEG 169
Query: 475 CEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIA 531
+ G FD+ YL + SD YI +GVKE NP F YI
Sbjct: 170 AKLGYDPHPLFDTSFYLEQNPQILA---SDINPLIY-YINNGVKEELNPHPLFDTNFYIK 225
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSA 589
+ HF G +G F+ YL + L
Sbjct: 226 Q-------IKLDLEKTLNPLIHFLQIGSFQGLDPHSLFHTSHYLENNPGL-------DMN 271
Query: 590 AAQHYITHGMKE 601
H+I G +E
Sbjct: 272 PLVHFIQWGARE 283
Score = 92.2 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/212 (21%), Positives = 72/212 (33%), Gaps = 37/212 (17%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FDS Y +++ + HYI G +EGRNP F + YI ++ D+ +
Sbjct: 28 LFDSDYYCEKNPEVKKY----KIDPLGHYIDIGSREGRNPHPLFDSAYYIENNPDVAKSG 83
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRG--AAARHYIT 512
HF G E R F++ YL +D G H+
Sbjct: 84 IPP-------LIHFIYHGAREKRNPHPLFNTEFYLKQ-------IKTDLGQQNPLGHFCQ 129
Query: 513 HGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNP 569
G+ EG +P F Y+ + P + H+ G + G F+
Sbjct: 130 VGIFEGLDPHPLFDTSYYLNRYS------KQLPQNIN-PLVHYLQEGAKLGYDPHPLFDT 182
Query: 570 DLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
YL + +YI +G+KE
Sbjct: 183 SFYLEQNPQILA----SDINPLIYYINNGVKE 210
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 13/85 (15%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDL 579
+ F + Y + ++ P H+ + G EGR+ F+ Y+ + D+
Sbjct: 27 NLFDSDYYCEKNPEVKKY-KIDPLG------HYIDIGSREGRNPHPLFDSAYYIENNPDV 79
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRA 604
H+I HG +E R
Sbjct: 80 ----AKSGIPPLIHFIYHGAREKRN 100
>gi|254513175|ref|ZP_05125240.1| calcium binding hemolysin protein, putative [Rhodobacteraceae
bacterium KLH11]
gi|221532179|gb|EEE35175.1| calcium binding hemolysin protein, putative [Rhodobacteraceae
bacterium KLH11]
Length = 12584
Score = 93.7 bits (231), Expect = 8e-17, Method: Composition-based stats.
Identities = 42/309 (13%), Positives = 82/309 (26%), Gaps = 19/309 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ T+ GDD + + G G + + ++ G N TI
Sbjct: 9272 NDRIVTGNGTTTVQAVAGDDHVTASNAGDSVDLGSGDDTFIGGAGGVTVHGRAGNDTINA 9331
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ +++ G G DV+ G + ++ GNDV G G +T + L+ + + ++
Sbjct: 9332 GSANDTLYGDEGADVISGGAGDDTISGGHGNDVLRGGIGTNTLKGDSGDDLFILDQGSDS 9391
Query: 325 IIVYDANEHKQDFLS--------DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
D +S +V+ + + + + L
Sbjct: 9392 A----DGGDGHDTVSYKSATQSVNVQLSGISGGGAVGDTFTSIEGVVGSDFNDTLTGSAE 9447
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+ E G D G DL S AA + + ++
Sbjct: 9448 DNRLEGGNGADTLIGGSGIDTASYLSSAEGVSIDLVTGLASGGDAAGDTF--NSIESLTG 9505
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
L+ L + +G D + D+
Sbjct: 9506 SRFADTLKGDTGANRLEGGDGNDTLQGSLGNDTLVGGEGADILQGGTGDDHVFADDHDIL 9565
Query: 497 NVFGSDRGA 505
G
Sbjct: 9566 ADGGDGTDT 9574
Score = 92.2 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/383 (13%), Positives = 93/383 (24%), Gaps = 38/383 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM----TIAQH 265
G + + ID + S TI
Sbjct: 9210 GTTLSGGLGADQFVGRTGGNDVVSYADSATGVVIDRAANTASGTAAEGDTFIDIETIVGS 9269
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ +V +G V + ++ S+ D D SG DTF + ++
Sbjct: 9270 DHNDRIVTGNGTTTVQAVAGDDHVTASNAGDSVDLGSGDDTFI--GGAGGVTVHGRAGND 9327
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ + + D L E + + L IG + +
Sbjct: 9328 TINAGSAN--DTLYGDE------GADVISGGAGDDTISGGHGNDVLRGGIGTNTLKGDSG 9379
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
F L +G DS +D + + I+ G G + + +
Sbjct: 9380 DDLFILDQGS----DSADGGDGHDTVSYKSATQSVNVQLSGISGGGAVGDTFTSIEGVVG 9435
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF-------VTFDSYLYLGSYDDLRNV 498
++ L + D G D + V+ D L S D
Sbjct: 9436 SDFNDTLTGSAEDNRLEGGNGADTLIGGSGIDTASYLSSAEGVSIDLVTGLASGGDAAGD 9495
Query: 499 FG------SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ A G D L+ ++ L+ G D
Sbjct: 9496 TFNSIESLTGSRFADTLKGDTGANRLEGGDGNDTLQGSLGNDTLVGGEGADILQGGTGDD 9555
Query: 553 HF-------SNFGYEEGRSITFN 568
H G + +I F+
Sbjct: 9556 HVFADDHDILADGGDGTDTIDFS 9578
Score = 87.9 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 68/442 (15%), Positives = 121/442 (27%), Gaps = 45/442 (10%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + I + F++I I G + +
Sbjct: 9230 DVVSYADSATGVVIDRAANTASGTAAEGDTFIDIETIVGSDHNDRIVTGN--GTTTVQAV 9287
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
G H + N G V D V + + ++A G + D
Sbjct: 9288 A---GDDHVTASNAGDSVDLGSGDDTFIGGAGGVTVHGRAGNDTINA--GSANDTLYGDE 9342
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
A GA ++ + T+ GDDL L + D +
Sbjct: 9343 GADVISGGAGDDTISGGH--GNDVLRGGIGTNTLKGDSGDDLFILDQGSDSADGGDGHDT 9400
Query: 249 SWSSIGGYEKNM---TIAQH-------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
N+ I+ T IE VVGS ND + G++ +N +G D
Sbjct: 9401 VSYKSATQSVNVQLSGISGGGAVGDTFTSIEGVVGSDFNDTLTGSAEDNRLEGGNGADTL 9460
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA----------- 347
G SG+DT Y + + I + + D + +E L +
Sbjct: 9461 IGGSGIDTASYLSSAEGVSIDLVTG---LASGGDAAGDTFNSIESLTGSRFADTLKGDTG 9517
Query: 348 -------DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
D L + L G D + H +G D D
Sbjct: 9518 ANRLEGGDGNDTLQGSLGNDTLVGGEGADILQGGTGDDHVFADDHDILADGGDGTDTI-D 9576
Query: 401 SYLYLGSYD----DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
Y + D V + G + Y NP + ++ ++ ++++
Sbjct: 9577 FSNYDRAVDFSLGTTVKVHENAVGGSFGVYTNSTPIYNGNPISLASVFNVSHFGEVLDLQ 9636
Query: 457 ADAPDLVQVGKDHFSNFGCEEG 478
L + + + +G
Sbjct: 9637 GKQVTLQIGDESYGAIYGTSPT 9658
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 60/384 (15%), Positives = 107/384 (27%), Gaps = 39/384 (10%)
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
V ++ ++ S + + ++ + G+ +L N
Sbjct: 10548 VISLNAGSAEGELQYQIVENQTSDGSGEVGTTTVVDQGTIQNVERLIGTSGSDSITLDGN 10607
Query: 206 IY-----KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
Y + + T++ G D + N N S ++IG
Sbjct: 10608 GYYVEARGGDDFLQGGSGNDTLHGGAGKDTVTYANATSAVNVDLSNITSGTAIGTDTLID 10667
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPS 313
IE+VVGS D +IGN+ NV +G V G G DT +
Sbjct: 10668 -------IENVVGSGFRDTIIGNTEANVLDGGTGGGVLRGEEGDDTLVANQSADEFDGGD 10720
Query: 314 YLYKIY---RFENAIIVYDANEHKQ------DFLSDVERLRFADQCIDSVNVKQRSILEY 364
L + I ++ N H D ++VE + + + + L+
Sbjct: 10721 GLDTVSYKNATAGVSINFETNVHGTSTYRSGDTYANVEGIVGSKFADTLTGDENDNHLDG 10780
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD-----LRNVFGSDR 419
+ + L+ G+D + F + G D + G
Sbjct: 10781 SDGNDTLVGGFGKDTLLGGTGDDTLH------VDFVDAVDGGDGHDRVMFSVPVAHGDSG 10834
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ + E + AD + G S G ++
Sbjct: 10835 VILDLQTSRARFTHENSLSTGVLQSFSGIDEIVGTQNADVLRAGRGGDLTLSGAGGDDIL 10894
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDR 503
F T L G+ D G D
Sbjct: 10895 FGTGGDTLQGGAGSDRLYGRGGDI 10918
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 76/299 (25%), Gaps = 33/299 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGG-DDLLDLTLIGGVKNYIDLNTESWSSIG------------ 254
I G D + ++ + +N + + G
Sbjct: 5685 GENDIIIGGAGADRIDGGDGASDTIQYFGDASTQSGVIVNLTTGNGYGADAEGDQISNVE 5744
Query: 255 ---GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G + I E++ G +GND + GN +++ G + DG +G D+ Y +
Sbjct: 5745 AVVGSAYDDRIIGSATDEALQGGAGNDDISGNGGDDILDGGRGRNRLDGGAGSDSVSYDS 5804
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ D D+L +E + + D + + +
Sbjct: 5805 NKNAVYVDLELG---FVDKGNGDFDYLYSIENIEGSRFNDDIRGTDASDFFLGSLGQDTI 5861
Query: 372 IQVIGQDVFES----------MKHFYEFGLSEGRDITFDSYLYLGSYD----DLRNVFGS 417
G D F S D+ + L V
Sbjct: 5862 DAKGGADSINYSKIQLPQSSEQDGFLLVLKSSEDSTESDALVASYRGGRIEQTLIAVETV 5921
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ + + + A+ D I + + + ++FG
Sbjct: 5922 TGSLYRDIILGSSGSDHIDGALGSDTIFGAAGNDYIVSTGEGGVVDGGAGRDVADFGFA 5980
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 81/530 (15%), Positives = 153/530 (28%), Gaps = 52/530 (9%)
Query: 42 FDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYFM 100
D+T + R + + F + + + G +
Sbjct: 10149 IDLTSSSFAGGFAERDSYQGVENLTGSNFNDILRGDAQANQLFGGLGDDALLGMQGDDHI 10208
Query: 101 EINFDKADVWRY-GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
+ ++ G ++ A G H G G + ++ DS
Sbjct: 10209 HGDGGFDEIDGGDGYDILNYSQSTQAIQLNFATG-AHSGGDAAGDTISNIEAVIGTDSDD 10267
Query: 160 TSVMSYFMPQDSMMDASFGYC-----------ATPMVSDIVAVQ---KIYGAPKGSLGNN 205
T V + + + P +++ V V I G +
Sbjct: 10268 TIVSTSSLLHIDGGEGVDHVSFVGTSNGVSIFTAPSLANYVGVMGSTYISGVETVIGSD- 10326
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + ++ G DLL+L+ +DL + I G+E N+
Sbjct: 10327 ---HNDTFQVRGGVTSLDGGAGVDLLNLSNASAPGASVDLASG-VVIIDGFEFNV----- 10377
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T IE + GS + ++G++ + +F+ +G DVF G G D + N
Sbjct: 10378 TGIEHIKGSGLAETIVGSAQDELFYAGAG-DVFRGGDGNDYVKLSNSYLQADVSVAANDD 10436
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
I+ D + L+ VE + F+D I+ + L V
Sbjct: 10437 ILLD-FDGAIITLNSVETIEFSDGFIN---------------GDTLRTVYAASGSSGQIS 10480
Query: 386 FYEFGLSEGRDITF-DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ F + G D G++ A R + G + F +
Sbjct: 10481 LLSMRQALSDVGGFIRKVTHAGEKVDAVGGDGNNVLFANRELSDYDGGSGTDTVDFSNVS 10540
Query: 445 YIASHEDLI--NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+I NA + +L ++ ++ G E T + + + L GSD
Sbjct: 10541 LTTDEHLVISLNAGSAEGELQYQIVENQTSDGSGEVGTTTVVDQGTIQNVERLIGTSGSD 10600
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
E R D F L+ + ++ L
Sbjct: 10601 SITLD---GNGYYVEARGGDDF--LQGGSGNDTLHGGAGKDTVTYANATS 10645
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 58/437 (13%), Positives = 118/437 (27%), Gaps = 36/437 (8%)
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
+ + I +G + Y +D
Sbjct: 10010 IDGGDGTDTVSYQNNERAISIDLVDANSGLSTTFKSIEQFVGTSFDDRFRLEQTAYSIDA 10069
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
DS SV + DS + + + P + ++V++ G
Sbjct: 10070 GLGQDSIDLSVWTSGAKIDSG-NGTISLVSGPAIGSFISVEEFKGT----------GQND 10118
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-------------SIGGYEK 258
+T +GG D L IDL + S++ ++ G
Sbjct: 10119 VFVAGFQSETFDGAGGVDSLSFE-RSLQGVRIDLTSSSFAGGFAERDSYQGVENLTGSNF 10177
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N + + G G+D ++G ++ G D DG G D Y + ++
Sbjct: 10178 NDILRGDAQANQLFGGLGDDALLGMQGDDHIHGDGGFDEIDGGDGYDILNYSQSTQAIQL 10237
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A + + D +S++E + D V+ ++ + + V +
Sbjct: 10238 NFATGA---HSGGDAAGDTISNIEAVIGTDSDDTIVSTSSLLHIDGGEGVDHVSFVGTSN 10294
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
S + Y+ + + +D + G +
Sbjct: 10295 GVSIFT-----APSLANYVGVMGSTYISGVETVIGSDHNDTFQVRGGVTSLDGGAGVDLL 10349
Query: 439 AFKALEYIASHEDLINAF--ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ DL + D + G +H G E + L+ D+
Sbjct: 10350 NLSNASAPGASVDLASGVVIIDGFEFNVTGIEHIKGSGLAETIVGSAQDELFYAGAGDVF 10409
Query: 497 NVF-GSDRGAAARHYIT 512
G+D + Y+
Sbjct: 10410 RGGDGNDYVKLSNSYLQ 10426
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/340 (13%), Positives = 100/340 (29%), Gaps = 27/340 (7%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D + + + ++ + +E++VGS +DV +GN ++N
Sbjct: 8895 FDFSRGLSNGDIEVKGPPGRTVAISGVAHIIGDHVSNVENIVGSIFDDVFVGNGSDNTID 8954
Query: 291 ESSGNDVFD---------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+G+D+ G G D Y + ++ + +QD +S
Sbjct: 8955 AGAGDDIVYASDGRDILAGGDGNDLISYSNATQGVRVSLNGG---FASKSGTEQDLISGF 9011
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK-------HFYEFGLSEG 394
E ++ V +I + + + G D+ + + SE
Sbjct: 9012 ENIQGGRASDTLVGDSSDNIFLGSDGSDVIYGGEGHDIVDLSALEVDTDVYIQTLAGSER 9071
Query: 395 RDITFDSYLYLGSYDDLRNVFG----SDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
+ ++ D+ G V G +D+ + + + H VK G + + +
Sbjct: 9072 QLVSLDTVNVDGVVTSRLRVTGTLVPADKISITINSVQHTVKVG---ALDDRSSVLRTFK 9128
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
L + + L+ D + T D+ V + Y
Sbjct: 9129 ALFDGDSSLSSLIDSELDEVAGELKFTPATPTPLVVTQSTEAQDVFTVKFGSGSSEKTQY 9188
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
++E R + L + + G
Sbjct: 9189 FAS-IEEVRGASGADRFVQLPQGTTLSGGLGADQFVGRTG 9227
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 60/155 (38%), Gaps = 7/155 (4%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNM-TIAQHTVIESVVGSSGNDVVIGNSANNVF 289
L ++ ++L S SS+ +N+ I ++ ++++G S ++ + G + N++
Sbjct: 7622 LYVSSPSRSSPAVNL---SVSSVELSIRNIENIVGTSLADTLIGDSASNTLSGGAGNDLI 7678
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
++G D +G +G+DT Y + I A + D +S E + +
Sbjct: 7679 EGAAGADKLEGGTGVDTVSYKSSDAGVTINLETGAAS---GGDASGDEISGFENIEGSSF 7735
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + + G + + +
Sbjct: 7736 NDHLTGDAGNNTFVASTGNDQIFAGGGTNTVDYSR 7770
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/367 (12%), Positives = 83/367 (22%), Gaps = 32/367 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
NGY R + D G GK T+ NA +
Sbjct: 10596 TSGSDSITLDGNGYYVEARGGDDF--LQGGSGNDTLHGGAGKDTVTYANATSAV------ 10647
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
N D+ + + + + ++
Sbjct: 10648 ------NVDLSNITSGTAIGTDTLIDIENVVGSGFRDTIIGNTEANVLDGGTGGGVLRGE 10701
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + + + +G + + G + I
Sbjct: 10702 EGDDTLVANQSADEFDGGDGLDTVSYKNATAGVSINFETNVHGTSTYRSGDTYANVEGIV 10761
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--------DGSSGLDT 306
G + T+ + GS GND ++G + +G+D DG G D
Sbjct: 10762 GSKFADTLTGDENDNHLDGSDGNDTLVGGFGKDTLLGGTGDDTLHVDFVDAVDGGDGHDR 10821
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV--------ERLRFADQCIDSVNVKQ 358
+ P + H+ + V E + + +
Sbjct: 10822 VMFSVPVAHGDSGVILDLQTSRARFTHENSLSTGVLQSFSGIDEIVGTQNADVLRAGRGG 10881
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
L A +D++ G D + G DI Y F D
Sbjct: 10882 DLTLSG-AGGDDILFGTGGDTLQGGAGSDRLYGR-GGDILVGGAGADSYYVTGPGTFTID 10939
Query: 419 RGAAARH 425
+
Sbjct: 10940 FAEGNGN 10946
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 53/326 (16%), Positives = 78/326 (23%), Gaps = 27/326 (8%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G + IE V G+SG D + G D F G +G +
Sbjct: 9174 FTVKFGSGSSEKTQYFASIEEVRGASGADRFVQLPQGTTLSGGLGADQFVGRTGGNDVVS 9233
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
YA S + + D D+E + +D V + ++ A +
Sbjct: 9234 YADSATGVVIDRAANT--ASGTAAEGDTFIDIETIVGSDHNDRIVTGNGTTTVQAVAGDD 9291
Query: 370 DLIQ---------VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ G D F G D Y D S
Sbjct: 9292 HVTASNAGDSVDLGSGDDTFIGGAGGVTVHGRAGNDTINAGSANDTLYGDEGADVISGGA 9351
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
HG R L+ + + I G D S +
Sbjct: 9352 GDDTISGGHGNDVLRGGIGTNTLKGDSGDDLFILDQGSDSADGGDGHDTVSYKSATQSVN 9411
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
V G+ D G+ D L A L
Sbjct: 9412 VQLSGISGGGAVGDTFTSIEGVVGS----------------DFNDTLTGSAEDNRLEGGN 9455
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ +G D S EG SI
Sbjct: 9456 GADTLIGGSGIDTASYLSSAEGVSID 9481
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/316 (13%), Positives = 82/316 (25%), Gaps = 28/316 (8%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----- 251
A + +S + + + G L+ + ID +
Sbjct: 3812 ADLADASKTVDSETRIAGESVSAKVLVEGDGQSTQTLSSTATESSSIDTGESHFDISTSK 3871
Query: 252 -----SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S+ G + + E + G +GND + G N+V +G D G +G D
Sbjct: 3872 FQKLESVQGNAADNKLTGSGGDEHLAGLAGNDELRGAGGNDVILGGTGADKLYGGAGNDY 3931
Query: 307 F---FYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVERLRFA------DQC------ 350
+ +I + ++ + E F D
Sbjct: 3932 IRARIIEDAASEGQIATTGGSDLLVGGSGADSYILAEGTEASSFGVIGHGYDGDFSTAFI 3991
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+S + L DL +G + GLS D+ + + D
Sbjct: 3992 DNSAADFAQDTLFLPVLNSDLSWKVGS--LAADDGTMTVGLSLLTKQKPDTPVAIVKNWD 4049
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
A + + + + F +Y + DL+ +
Sbjct: 4050 NDANRTLTIYTADGYQYSPDGEGNLHLTGFDGEKYRVHYNDLVGSGLKGEIYDFSSLLQA 4109
Query: 471 SNFGCEEGRFVTFDSY 486
+ R FD
Sbjct: 4110 TETQSASTRIALFDEE 4125
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/233 (12%), Positives = 66/233 (28%), Gaps = 17/233 (7%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ I G N I+ + ++G +G D G + ++ + +G++ G +G D
Sbjct: 8122 GGDGDDVIRGAVGNDIISGGDGDDLLLGDAGTDQFHGGAGDDTIYADAGDNSISGGAGSD 8181
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDF-----LSDVERLRFADQCIDSVNVKQRS 360
+ + ++E D + +E ++ + + S
Sbjct: 8182 VLVLTGSVGASLDLV---SGDLLFSDEVASDVSLIGRVDGIEIVQGSSGADTISGMAG-S 8237
Query: 361 ILEYTASYEDLIQV--------IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
L A + L+ G D + EG D S + +
Sbjct: 8238 TLYGNAGNDRLVGGGQSKLYGGAGDDTLLNGSEGDVLAGGEGSDTYRISRFGKVTLSETA 8297
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+D +Y + K+ + +++ +
Sbjct: 8298 KFGDTDTVYLDVNYNDLHAAFEADGLHIKSRPALEDAPGVLDVLVSDWENTSG 8350
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 5/125 (4%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
N+ +S ++ D D+ G D T ++ I
Sbjct: 12363 NLVTFSDNSLNSSETASLLD---TDVYGNQNWGEAAQLPDAATGGDLNLQLDLTG--ING 12417
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+V +S+ G+SG+ V+ G N+ SGNDV G +G DT+ + F++
Sbjct: 12418 GSVSDSLTGNSGDSVIKGLDGNDTLNGGSGNDVLIGGAGNDTYRVNLGDQTTVVDNFDSG 12477
Query: 325 IIVYD 329
D
Sbjct: 12478 SSDLD 12482
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 69/505 (13%), Positives = 141/505 (27%), Gaps = 52/505 (10%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
ET I SD G V + + + + ++ G +
Sbjct: 10319 VETVIGSDHNDTFQVRGGVTSLDGGAGVDLL---NLSNASAPGASVDLASGVVIIDGFEF 10375
Query: 131 AL-GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD-SMMDASFGYCATPMVSDI 188
+ G+ H + G D + V D + S+ + ++
Sbjct: 10376 NVTGIEHIKGSGLAETIVGSAQDELFYAGAGDVFRGGDGNDYVKLSNSYLQADVSVAAND 10435
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ GA + + ++T+Y + G G + + +
Sbjct: 10436 DILLDFDGAIITLNSVETIEFSDGFINGDTLRTVYAASG--------SSGQISLLSMRQ- 10486
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD----GSSGL 304
+ S +GG+ + +T A V VG GN+V+ N + + SG D D +
Sbjct: 10487 ALSDVGGFIRKVTHAGEKV--DAVGGDGNNVLFANRELSDYDGGSGTDTVDFSNVSLTTD 10544
Query: 305 DTFFYYAPSYLYKI---------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ + + + + V Q + +VERL +
Sbjct: 10545 EHLVISLNAGSAEGELQYQIVENQTSDGSGEVGTTTVVDQGTIQNVERL---------IG 10595
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN-- 413
+ + + G D + G+D + DL N
Sbjct: 10596 TSGSDSITLDGNGYYVEARGGDDFLQGGSGNDTLHGGAGKDTVTYANATSAVNVDLSNIT 10655
Query: 414 ---VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
G+D + + G ++ + + + ++ LV
Sbjct: 10656 SGTAIGTDTLIDIENVVGSGFRDTIIGNTEANVLDGGTGGGVLRGEEGDDTLVANQSADE 10715
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR--GAAARHYITHGVKEGRNPDAF-KAL 527
+ G D+ Y + + F ++ + R T+ EG F L
Sbjct: 10716 FDGGD------GLDTVSYKNATAGVSINFETNVHGTSTYRSGDTYANVEGIVGSKFADTL 10769
Query: 528 EYIASHEDLINAFADAPDLVQAGKD 552
+ L + + + GKD
Sbjct: 10770 TGDENDNHLDGSDGNDTLVGGFGKD 10794
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 41/306 (13%), Positives = 82/306 (26%), Gaps = 33/306 (10%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+L +N+ + + + + S + +D + G + +
Sbjct: 8052 TLSDNVIALSPKTPGIDLSKVV--SSTTNTAITADHRARGKGLDQWVANAEHFIGTKYDD 8109
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFES---------SGNDVFDGSSGLDTFFYYA 311
E G G+DV+ G N++ +G D F G +G DT + A
Sbjct: 8110 QFVGSDASERFDGGDGDDVIRGAVGNDIISGGDGDDLLLGDAGTDQFHGGAGDDTIYADA 8169
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV-------------NVKQ 358
+ +++ + D +S L F+D+ V
Sbjct: 8170 GDNSISGGAGSDVLVLTGSVGASLDLVSG--DLLFSDEVASDVSLIGRVDGIEIVQGSSG 8227
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ A L G D + G D + GS D+
Sbjct: 8228 ADTISGMAG-STLYGNAGNDRLVGG-GQSKLYGGAGDDTLLN-----GSEGDVLAGGEGS 8280
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ + E + ++ DL AF ++ G +
Sbjct: 8281 DTYRISRFGKVTLSETAKFGDTDTVYLDVNYNDLHAAFEADGLHIKSRPALEDAPGVLDV 8340
Query: 479 RFVTFD 484
++
Sbjct: 8341 LVSDWE 8346
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 36/133 (27%), Gaps = 3/133 (2%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D G +ID ++ G T+ + ++G +G D++ G ++
Sbjct: 6861 DTITSGNHATFIDGGDGK-DTLTGGAGADTLIGGRGDDILIGGAGADIIRGGEGDDRLLG 6919
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+D DG SG D + + V +
Sbjct: 6920 GLESDTLDGGSGSDQLI--GGGGDDMLLASRGRDDIDGGEGIDTVDFDGVSLSNGERLVV 6977
Query: 352 DSVNVKQRSILEY 364
S L Y
Sbjct: 6978 RSDAGSSEGELHY 6990
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 6/111 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ S + G+DL+ + + LN S G + + +
Sbjct: 8958 GDDIVYASDGRDILAGGDGNDLISYSNATQGV-RVSLNGGFASKSGTEQDLI-----SGF 9011
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
E++ G +D ++G+S++N+F S G+DV G G D A +Y
Sbjct: 9012 ENIQGGRASDTLVGDSSDNIFLGSDGSDVIYGGEGHDIVDLSALEVDTDVY 9062
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 36/133 (27%), Gaps = 28/133 (21%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S +I I +++ G +G D +IG +++ +G D+ G G D
Sbjct: 6859 SNDTITSGNHATFIDGGDGKDTLTGGAGADTLIGGRGDDILIGGAGADIIRGGEGDDRL- 6917
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D L + +L +
Sbjct: 6918 ------------LGGLESDTLDGGSGSDQL---------------IGGGGDDMLLASRGR 6950
Query: 369 EDLIQVIGQDVFE 381
+D+ G D +
Sbjct: 6951 DDIDGGEGIDTVD 6963
Score = 53.6 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 74/245 (30%), Gaps = 16/245 (6%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+Q + G K+ + ++ + D ++ ++ GG +
Sbjct: 11523 LQDLAGFLTDDAQYTKEKLISFLRQKGYLSSDGDLLASVGINNSIYGGGGADVIAQLGGH 11582
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGS 301
++ G + I ++ G+ G D +I +N+ GND G
Sbjct: 11583 NTAFGGAGDDLIYGLGNNNALSGNQGVDRLIAAGDSNLVLAGDGNDQVISTGKSTTILGG 11642
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
SG D + + ++ I+ +H D + + + + +
Sbjct: 11643 SGNDQVLLLGRNGWVRGDAGDD-YILAFGYDHSVDGGAGEDIIVASSAQSFILGGDGSDK 11701
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF------DSYLYLGSYDDLRNVF 415
L + L G DV S G D+ D+ + GS D V
Sbjct: 11702 LYVSGREVQLDAGAGNDVIRSSLFSSLVVAGSGHDVILLDQSTQDTRVDSGSGHDTILVG 11761
Query: 416 GSDRG 420
GS
Sbjct: 11762 GSSTI 11766
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+D ++ +++++S I ++I + + G++ ++ + G + N+
Sbjct: 4527 AVDFRDQTEDQSLDTSSSDAYSDI------ISIRGGGGDDVLTGNALDNHLFGEAGNDTL 4580
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+GND G G D+ + Y I + ++
Sbjct: 4581 VGGAGNDSLYGGEGKDSLTGGEGTDAYVIVPGTDGAVI 4618
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 62/207 (29%), Gaps = 20/207 (9%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSSGLDTFFYYAPSYLYK 317
E+VVG++ D + GN+ N G+D G G DT Y A +
Sbjct: 9847 NFENVVGTNFADTLAGNAEENRIEAGRGDDKVIGDAGSDTLIGGEGTDTLEYIA-LEQAQ 9905
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
++ + V + + D +S E ++ + +A + G
Sbjct: 9906 VFDLDGG-TVTSISSTETDSISGFE---------SAIGTRNDDTFIASADANNFDGYFGA 9955
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D K L+ Y ++ ++ V G+ + +G +
Sbjct: 9956 DTISYRKSIQSVVLNLRDGTGQSGYAEGDTFSNIEKVVGTGFDDRFIASESILEIDGGDG 10015
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQ 464
+ + + A++
Sbjct: 10016 TDTVSYQNNERAISIDLVDANSGLSTT 10042
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 39/115 (33%), Gaps = 1/115 (0%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A + IE + GS D + GN+ +NV S G D G G DT+ S +
Sbjct: 4885 AHYDEIEYIAGSRFADTLTGNALDNVIVTSGGADQLRGGGGNDTYVISDSSSEIVVIDNY 4944
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ ++ Q + E D D + + A +D G
Sbjct: 4945 DEHTTSTESDVIQVSANQSELALQRDGQ-DLLLRLSDAADAGGARIKDWFGQAGD 4998
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 22/133 (16%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTL-----------------IGGVKNYIDLNTESWS 251
+ ++ + +GGDDL + ++L +
Sbjct: 6474 YGDVISGTEDVEYLDGNGGDDLFIFSGGGDTIHGGGGKDILWLRDATTNLTLNLASGEVV 6533
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G T IE + G G+D + G+ +N+F + G+D G SG D + A
Sbjct: 6534 DAFGVTAQF-----TSIEGLGGGKGDDTIFGDDNDNIFLVTGGSDKIYGGSGNDRVDFRA 6588
Query: 312 PSYLYKIYRFENA 324
+ +
Sbjct: 6589 LDASVTVSTLDKG 6601
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 46/368 (12%), Positives = 99/368 (26%), Gaps = 24/368 (6%)
Query: 3 NIKPVYTTERIADHLLRDQYWSNYF--------IRYKPDVLTTHRLSFDITELNPNAQEV 54
+ Y R D L+ ++ + Y + +IT +
Sbjct: 10605 DGNGYYVEARGGDDFLQGGSGNDTLHGGAGKDTVTYANATSAVNVDLSNITSGTAIGTDT 10664
Query: 55 ARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGI 114
L + VV F +T I + + R + + AD + G
Sbjct: 10665 ----LIDIENVVGSGFRDTIIGNTEANVLDGGTGGGVLRGEEGDDTLVANQSADEFDGGD 10720
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G T+ NA + G+ + + S ++ D+ +D
Sbjct: 10721 GLDTVSYKNATAGVSINFETNVHGTSTYRSGDTYANVEGIVGSKFADTLT-GDENDNHLD 10779
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
S G + G + + + ++ + ++ + GD + L
Sbjct: 10780 GSDGNDTLVGGFGKDTLLGGTGDDTLHV-DFVDAVDGGDGHDRVMFSVPVAHGDSGVILD 10838
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L + N+ S + + I + + G D+ + + + +G
Sbjct: 10839 LQTSRARFTHENSLSTGVLQSFSGIDEIVGTQNADVLRAGRGGDLTLSGAGGDDILFGTG 10898
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
D G +G D + + A Y + FA+ +
Sbjct: 10899 GDTLQGGAGSDRLY---GRGGDILVGGAGADSYYVTGP-------GTFTIDFAEGNGNLD 10948
Query: 355 NVKQRSIL 362
+
Sbjct: 10949 TLHLDLTF 10956
Score = 47.1 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 10/138 (7%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-VKNYIDLNTESWS----- 251
LG + + + + D L LT+ G + + + +E+
Sbjct: 7260 QNTVLGVTSGGLNADEGGFDYTVDLAGLTDSDRLALTVDGTRSDSTVGVTSEADQGTIKD 7319
Query: 252 --SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G + IA V +G+D V G + ++ +G D G G D F
Sbjct: 7320 VERLVGTSGDDDIALDGKGYVVDAGAGDDTVKGGAGDDTLRGGTGRDALFGGIGDDRFID 7379
Query: 310 YAPSYLYKIYRFENAIIV 327
S I + +
Sbjct: 7380 DLDSR--VIDGGAGSDTL 7395
Score = 45.2 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 6/188 (3%)
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF--IQTIYDSGGDDLLDLT 234
G+ T ++ + ++ G+ ++ + + ++ + + GDD + L
Sbjct: 7276 GGFDYTVDLAGLTDSDRLALTVDGTRSDSTVGVTSEADQGTIKDVERLVGTSGDDDIALD 7335
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
G V + ++ G + T+ T +++ G G+D I + + V +G
Sbjct: 7336 GKGYVVD----AGAGDDTVKGGAGDDTLRGGTGRDALFGGIGDDRFIDDLDSRVIDGGAG 7391
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+D D S + R Q LS F + + V
Sbjct: 7392 SDTLDLSEHTVAINAILREAKVGLVRNAVGGNFGKDASGSQLTLSATVAAPFTGRTPERV 7451
Query: 355 NVKQRSIL 362
+
Sbjct: 7452 GKTVTLQI 7459
Score = 44.8 bits (104), Expect = 0.046, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 22/84 (26%)
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
S F + + D SD+ +R + L A + L+
Sbjct: 4522 SNKAIAVDFRDQTEDQSLDTSSSDAYSDIISIRGGGGDDVLTGNALDNHLFGEAGNDTLV 4581
Query: 373 QVIGQDVFESMKHFYEFGLSEGRD 396
G D + EG D
Sbjct: 4582 GGAGNDSLYGGEGKDSLTGGEGTD 4605
Score = 43.6 bits (101), Expect = 0.094, Method: Composition-based stats.
Identities = 38/260 (14%), Positives = 72/260 (27%), Gaps = 51/260 (19%)
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D + L++ R+ D + + A +++ + G DV
Sbjct: 5614 DGSVTGSHRLTN--RIVGNDLDNKLHGGSRADHISGRAGSDEIFGLGGNDVLTGGAGTDI 5671
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+GRD G D + G+DR A ++Y
Sbjct: 5672 LHGGDGRDYLLG----GGENDIIIGGAGADRIDG-------------GDGASDTIQYFGD 5714
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ G D EG ++ + +YDD +D
Sbjct: 5715 ASTQSGVIVNLTTGNGYGAD-------AEGDQISNVEAVVGSAYDDRIIGSATD------ 5761
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
+AL+ A ++D+ D G++ G S++++
Sbjct: 5762 ----------------EALQGGAGNDDISGNGGDDILDGGRGRN--RLDGGAGSDSVSYD 5803
Query: 569 PDLYLTSYDDLWNVFGSDRS 588
+ Y DL F +
Sbjct: 5804 SNKN-AVYVDLELGFVDKGN 5822
Score = 42.5 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 41/157 (26%), Gaps = 11/157 (7%)
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK-------DSPFIQTIYDSGGDD 229
+ +SDI A I G + + + D D
Sbjct: 8549 GDQPSYADLSDIAAFVDIAGDRGNDDADRTVADQATNGYLAARAQGVNLQEVGLDYSTSD 8608
Query: 230 L-LDLTLIGGVKNYIDLNTESWSSIGGYEKNM---TIAQHTVIESVVGSSGNDVVIGNSA 285
+++ L + T S S N I + + G G D + +
Sbjct: 8609 ANVEIDLNASGNELVSNVTGSVVSENRISGNDLGNVITGGVAEDVLSGGLGRDDLDAKAG 8668
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
N+ + D DG G+DT Y
Sbjct: 8669 NDKLIGFADGDRIDGGEGVDTIDYSGLKTALGSVVTG 8705
Score = 42.5 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 66/248 (26%), Gaps = 24/248 (9%)
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
D D + + + D + A D + IYG + +
Sbjct: 11550 YLSSDGDLLASVGINNSIYGGGGADVIAQLGGHNTAFGGAGDDL----IYGLGNNNALSG 11605
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDL------TLIGGVKNYIDLNTESWSSIGGYEKN 259
++ + G D ++ G + L W + G +
Sbjct: 11606 NQGVDRLIAAGDSNLVLAGDGNDQVISTGKSTTILGGSGNDQVLLLGRNGW--VRGDAGD 11663
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSSGLDTFFYY 310
I SV G +G D+++ +SA + G+D D +G D
Sbjct: 11664 DYILAFGYDHSVDGGAGEDIIVASSAQSFILGGDGSDKLYVSGREVQLDAGAGND-VIRS 11722
Query: 311 APSYLYKIYRFENAIIVYDANEHKQ--DFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + +I+ D + D S + + S +
Sbjct: 11723 SLFSSLVVAGSGHDVILLDQSTQDTRVDSGSGHDTILVGGSSTIRGGSGTDSFYISMDNR 11782
Query: 369 EDLIQVIG 376
+I
Sbjct: 11783 NTVIADAA 11790
Score = 42.1 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 33/125 (26%), Gaps = 4/125 (3%)
Query: 310 YAPSYLYKIYRFENAIIVYDANEH--KQDFLSDVERLRFADQCIDS--VNVKQRSILEYT 365
A +Y +N + D ++ + S+++
Sbjct: 12377 TASLLDTDVYGNQNWGEAAQLPDAATGGDLNLQLDLTGINGGSVSDSLTGNSGDSVIKGL 12436
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ L G DV + ++ G T GS D VFG +
Sbjct: 12437 DGNDTLNGGSGNDVLIGGAGNDTYRVNLGDQTTVVDNFDSGSSDLDIVVFGDNITQNDLW 12496
Query: 426 YITHG 430
+ G
Sbjct: 12497 FERKG 12501
Score = 41.7 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 77/289 (26%), Gaps = 20/289 (6%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+V GS D + G+ +N F GND G G D + A Y + + +
Sbjct: 5417 TVYGSDYADTINGSDGSNRIFSGLGNDTLVGGGGNDEYVLIAFEYDKGL-----PVGIKS 5471
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ +++ + R D + + + ++ G +S
Sbjct: 5472 GAGLGEVTINNFDEGRAID--NIILPRSFNDLRLAFDGDDLVLNFFGSPPQDSDLSSRLT 5529
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G+S D + +++ F +I +
Sbjct: 5530 GISNNDLPDLQPNKDTPDGD-------PNYVVRLKNWQLSEDYRHARFTTFDGRTFII-N 5581
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
DL ++ D + + D + S+ + G+D
Sbjct: 5582 PDLTISYTSLDDSDSTDSVELDL--NKSDNLFSNDGSVTG-SHRLTNRIVGNDLDNKLHG 5638
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
GR + + ++ L G+D+ G
Sbjct: 5639 GSRADHISGRAGS--DEIFGLGGNDVLTGGAGTDILHGGDGRDYLLGGG 5685
Score = 41.7 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 26/92 (28%)
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + + V +E Q + DVERL D + +++ A +
Sbjct: 7289 DSDRLALTVDGTRSDSTVGVTSEADQGTIKDVERLVGTSGDDDIALDGKGYVVDAGAGDD 7348
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ G D G D D
Sbjct: 7349 TVKGGAGDDTLRGGTGRDALFGGIGDDRFIDD 7380
Score = 37.8 bits (86), Expect = 6.5, Method: Composition-based stats.
Identities = 57/371 (15%), Positives = 105/371 (28%), Gaps = 65/371 (17%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE--IGHA- 131
+ I +G T +Y + G G + E +G A
Sbjct: 5692 GGAGADRIDGGDGASDTIQYFGDASTQSGVIVNLTTGNGYGADAEGDQISNVEAVVGSAY 5751
Query: 132 ----LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVS 186
+G + GG + + +D + + D+ S+ +
Sbjct: 5752 DDRIIGSATDEALQGGAGNDDISGNGGDDILDGGRGRNRLDGGAGSDSVSYDSNKNAVYV 5811
Query: 187 DIVAVQKIYGAPKGSLGNNIY----------KIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
D+ G G+ Y + + + S G D +D
Sbjct: 5812 DLE-----LGFVDKGNGDFDYLYSIENIEGSRFNDDIRGTDASDFFLGSLGQDTIDAKGG 5866
Query: 237 GGVKNY--IDLNTES----------------------WSSIGGYEKNMTIAQHTVI---- 268
NY I L S S GG + IA TV
Sbjct: 5867 ADSINYSKIQLPQSSEQDGFLLVLKSSEDSTESDALVASYRGGRIEQTLIAVETVTGSLY 5926
Query: 269 -ESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKI 318
+ ++GSSG+D + G ++ F ++GND V DG +G D + I
Sbjct: 5927 RDIILGSSGSDHIDGALGSDTIFGAAGNDYIVSTGEGGVVDGGAGRDVADFGFAHNGLLI 5986
Query: 319 YRFENA----IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ I+ ++ + + L S++V ++ S +
Sbjct: 5987 DLNSDTRIKQIVQLGGGASERIEIQESNSLNIPTGARISLSVGAQNFAVSANSSIGWMDA 6046
Query: 375 IGQDVFESMKH 385
+ D+ +
Sbjct: 6047 LAADINAATAG 6057
>gi|222056408|ref|YP_002538770.1| outer membrane adhesin like proteiin [Geobacter sp. FRC-32]
gi|221565697|gb|ACM21669.1| outer membrane adhesin like proteiin [Geobacter sp. FRC-32]
Length = 3904
Score = 93.7 bits (231), Expect = 9e-17, Method: Composition-based stats.
Identities = 59/413 (14%), Positives = 112/413 (27%), Gaps = 53/413 (12%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
S + D G G ++ I + +
Sbjct: 828 SSGSGNDQLYGSIRNDALFGGGGNDLLVGGGGNDTIL------------ADAAISSASRE 875
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ + +S+ +D +G + G G
Sbjct: 876 WNVNNADFTGLSFDEALVGGIDNIYGGSG-------NDIIYAGGGNDSVDGG---IGNDN 925
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+I GGDD + G ++ L+T I G N IA + V
Sbjct: 926 LYGEGGNDSITGGGGDDFI-----QGDADWQALDTHGNDYIDGGAGNDRIAGLGGNDEVF 980
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------------FYYAPSYLY 316
G GNDV+ GN ++ +G+D+ G++G D + +
Sbjct: 981 GGDGNDVLQGNDGDDYLDGEAGDDLLVGNNGNDQLMGGDGLDEMAGNEGDDYLDGEAGDD 1040
Query: 317 KIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
K+Y + ++ + + + D + L D + ++ L + L +
Sbjct: 1041 KMYGDDGKDELFGGDGNDWLEGNKDGDYLDGEDGDDVLLGGEENDRLFGGEGNDRLQGDM 1100
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D + EG D F G +DL D +G E
Sbjct: 1101 GDDYLDGEAGNDNLMGLEGNDRLFG-----GDGNDLLQGGAGDDY----FDGGNGDDELT 1151
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+ + ++ L + G D+ + Y
Sbjct: 1152 GEAGDNRIFGGSGNDRLQGGVGNDYLNGGEGDDNLYGGDGTNVLVGGSGNDTY 1204
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 78/281 (27%), Gaps = 18/281 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ G + D D G ++ +N ++ GL
Sbjct: 962 DGGAGNDRIAGLGGNDEVFGGDGNDVLQGNDGDDYLDGEAGDDLLVGNNGNDQLMGGDGL 1021
Query: 135 MHPGSYNGGYPVYGVDNDY------ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
G + G D D + ++ + D G ++
Sbjct: 1022 DEMAGNEGDDYLDGEAGDDKMYGDDGKDELFGGDGNDWLEGNKDGDYLDGEDGDDVLLGG 1081
Query: 189 VAVQKIYGA--PKGSLGN------NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+++G G+ + ++ G+DLL GG
Sbjct: 1082 EENDRLFGGEGNDRLQGDMGDDYLDGEAGNDNLMGLEGNDRLFGGDGNDLL----QGGAG 1137
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ + G + I + + + G GND + G ++ + G +V G
Sbjct: 1138 DDYFDGGNGDDELTGEAGDNRIFGGSGNDRLQGGVGNDYLNGGEGDDNLYGGDGTNVLVG 1197
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
SG DT++ + +IY N L +V
Sbjct: 1198 GSGNDTYYIDPTREITEIYDNFNGDEQNTIKVLGDINLDNV 1238
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/479 (10%), Positives = 115/479 (24%), Gaps = 31/479 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ G D+ G G T + IG
Sbjct: 565 YGAGGNDAMYGYGGNDYLEGGKGDDTLYGGKGNDILYGGQGYDTYIY-----NIGDGTDT 619
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G + + + + + + + + ++ D ++
Sbjct: 620 IVDQDNLGRILIRRNGQTIQTGTLYSRGNNIWTDASGKVLLTHNSPWRLVLEDGGIIELG 679
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G G ++ ++ TI + I + S+G
Sbjct: 680 ENFQDGDFGLDLTELPANN----ISNTILGDYTPVPAESNEYQYDAIGIPIANAKTDSLG 735
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF-ESSGNDVFDGSSGLDTFFYYAPS 313
+ T T + + S+GND++ +++ G+++ +G SG D Y
Sbjct: 736 NIIYDATAPSPTRRDYLYDSAGNDLIKAGGGSDIINATRGGDNIIEGGSGSDIVADYGNG 795
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
F+ + + ++ ++ + + L
Sbjct: 796 NNVLFGEFQGDMADLV-----------------SAGETAEGINEKGDLVSSGSGNDQLYG 838
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
I D G D + + G + + G+
Sbjct: 839 SIRNDALFGGGGNDLLVGGGGNDTILADAAISSASREWNVNNADFTGLSFDEALVGGIDN 898
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+ ++ + + + G D + G ++ D +
Sbjct: 899 IYGGSGNDIIYAGGGNDSVDGGIGNDNLYGEGGNDSITGGGGDDFIQGDADWQALDTHGN 958
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D + + A G E D L+ + L D + G D
Sbjct: 959 DYIDGGAGNDRIA----GLGGNDEVFGGDGNDVLQGNDGDDYLDGEAGDDLLVGNNGND 1013
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 55/437 (12%), Positives = 118/437 (27%), Gaps = 74/437 (16%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ + + E P + + D+GG + +D T S + +
Sbjct: 1716 SNSTNSTAYLNFREYFINMDPDLAWMMDTGGLTATASSFGTNRSEALDGRTMSQTYLSSG 1775
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + + + + + G+ +++G + N+ G+DV +G +G D A + Y
Sbjct: 1776 DGDDVLYAGSADTKMFSNGGDSLLVGGTGNDYLVGGEGSDVLEGGNGYDILTGGAGNDTY 1835
Query: 317 KIYRFENAIIVYDAN----------------------EHKQDFL---------------- 338
R V D D +
Sbjct: 1836 IFRRGTGIDSVSDYGISASQDVIYVGDFITAEEVSLRRTGDDLVLTITDSGDRMVVKNWF 1895
Query: 339 ----SDVERLRFADQC------------------IDSVNVKQRSILEYTASYEDLIQVIG 376
S VER++FAD + + + L G
Sbjct: 1896 WNDTSQVERIQFADGTFWNVDTIKKKVLQGTENADILTGYESDDTITGLDGNDLLKGGAG 1955
Query: 377 QDVFESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
D + G D F +++ N + E
Sbjct: 1956 NDSLDGGTGNDYLSGGSGNDTYLFGRGSGSDVIEEVANPATEQNIVQLGDGVGPDDLEFM 2015
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV------TFDSYLYL 489
+ S++ L A + ++ + HF++ + + ++ YL
Sbjct: 2016 VTGEDLFIAVKNSNDQLQIKGWFAAEPARIEELHFADGTVWDRNAILSMMAVPTNTDDYL 2075
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-------FKALEYIASHEDLINAFAD 542
+ + G + + + + G + D L+ A ++DL +
Sbjct: 2076 AGTPNGDLLNGGGGYDSIYGFGGNDILIGGSEDDYIVGGQGNDTLDGGAGYDDLYDNDGT 2135
Query: 543 APDLVQAGKDHFSNFGY 559
A +D+ G
Sbjct: 2136 NRLSGGADEDYLEVAGG 2152
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/367 (13%), Positives = 87/367 (23%), Gaps = 25/367 (6%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ D DLT V+ L I G E TI +
Sbjct: 504 NTLDQGTVPTSFSDGSVWHFSDLTTGKSVRAGQGLFPPRHYVIFGKEGADTITGGEYADR 563
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G+ GND + G N+ G+D G G D + Y + + D
Sbjct: 564 FYGAGGNDAMYGYGGNDYLEGGKGDDTLYGGKGNDILYGGQGYDTYIYNIGDGTDTIVDQ 623
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSIL--EYTASYEDL--------IQVIGQDVF 380
+ + + + N I +G++
Sbjct: 624 DNLGRILIRRNGQTIQTGTLYSRGNNIWTDASGKVLLTHNSPWRLVLEDGGIIELGENFQ 683
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYL----GSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+ L Y S + + G A + + + +
Sbjct: 684 DGDFGLDLTELPANNISNTILGDYTPVPAESNEYQYDAIGIPIANAKTDSLGNIIYDATA 743
Query: 437 PDAF--KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL------Y 488
P L A ++ + G D+ G + + +
Sbjct: 744 PSPTRRDYLYDSAGNDLIKAGGGSDIINATRGGDNIIEGGSGSDIVADYGNGNNVLFGEF 803
Query: 489 LGSYDDLRNVFGSDRGAAAR---HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
G DL + + G + G + AL ++ L+ +
Sbjct: 804 QGDMADLVSAGETAEGINEKGDLVSSGSGNDQLYGSIRNDALFGGGGNDLLVGGGGNDTI 863
Query: 546 LVQAGKD 552
L A
Sbjct: 864 LADAAIS 870
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 76/543 (13%), Positives = 133/543 (24%), Gaps = 75/543 (13%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
S D DV G G + G H N YG +
Sbjct: 2363 SAGSGQDDVFGGDGDDVLAGGRGDDYLSGGFGNDVYAFNRGDGHDYIDNYPGTAYGETDT 2422
Query: 153 --YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
+ D + + + S + + S + I+
Sbjct: 2423 ISFGVDILPADIRATIDTSTGNLVLSIAGTDDNITIPWTDPNNGFATLSASAIARVQFID 2482
Query: 211 VQQKDSPFIQTIYDSGGDD------LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ F D ++L G + +L ++ Y
Sbjct: 2483 AGGSNRIFDLAGLIEAHKDELVAAATTPVSLFGADADTFELTGTVDAAGWQYAVAYAQTG 2542
Query: 265 HTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
E + GS GND + G + ++ G+D G SG DT+ YY I
Sbjct: 2543 DLFAEPNYLYGSWGNDTITGRAGDDTLEGGYGDDRLAGGSGDDTYAYYQWDGNDTIDDVS 2602
Query: 323 ----------NAIIVYDANEHKQDFLSD----------------------------VERL 344
I D D VE
Sbjct: 2603 TPGDPNSLLFGYGITPDDITLSHDKGQGQLILNILTTGETIRINHFVADDPYGPHAVEYF 2662
Query: 345 RFADQCI-----------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+F D + D + L TA+ + + G D + +
Sbjct: 2663 KFDDGTVLTWSQMIDKGFDIIGSSWDDDLPGTATTDRISGNEGNDFIAAGRGDDILAGGN 2722
Query: 394 GRDIT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
G D ++ + +DL + A PD + L Y + +
Sbjct: 2723 GDDFYHYNPGDGIDRINDLSLPGEENTLAFGEGIAL--------PDITQRLTYRDNTLII 2774
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF----GSDRGAAAR 508
+ + ++ G + TF + +Y+DL G A R
Sbjct: 2775 RVGDGGDEIHLSNFDPNQADSGPRAIQTFTF-ADGTSITYEDLVKNTFILQGDTTNDAIR 2833
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
G + ++ L + D G D + + +I+ +
Sbjct: 2834 GTNLSDRLYGYEGSDWLDAG--EGNDTLTSGTGDDELEGGTGNDAYVFNLGDGVDTISDS 2891
Query: 569 PDL 571
L
Sbjct: 2892 ATL 2894
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 46/402 (11%), Positives = 97/402 (24%), Gaps = 75/402 (18%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+K I + + + G++ D + GN N+ G+D+ G +G D + Y +
Sbjct: 2677 DKGFDIIGSSWDDDLPGTATTDRISGNEGNDFIAAGRGDDILAGGNGDDFYHYNPGDGID 2736
Query: 317 KIYRF---------------------------ENAIIVYDANEHKQDFLSD--------- 340
+I +N +I+ + + LS+
Sbjct: 2737 RINDLSLPGEENTLAFGEGIALPDITQRLTYRDNTLIIRVGDGGDEIHLSNFDPNQADSG 2796
Query: 341 ---VERLRFADQC--------------------IDSVNVKQRSILEYTASYEDLIQVIGQ 377
++ FAD L + L G
Sbjct: 2797 PRAIQTFTFADGTSITYEDLVKNTFILQGDTTNDAIRGTNLSDRLYGYEGSDWLDAGEGN 2856
Query: 378 DVFESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D S E G D F+ + + D + + ++ +
Sbjct: 2857 DTLTSGTGDDELEGGTGNDAYVFNLGDGVDTISDSATLEEGNIIHFGAGITAADLRTRID 2916
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ +++ + + +H R + G+
Sbjct: 2917 GNTLVIEYGNGGDAIILDNYDYSGLNGSHVVEHIEFADGSIIRLASLVDPGTEGNDLIFG 2976
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
F A + +A ++ L +D
Sbjct: 2977 TPFDDVINAK---------------GGDDEVYGLAGNDHLSGGTGSDRLDGGDDEDIIDG 3021
Query: 557 FGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
G + + + D YL + D +V + G
Sbjct: 3022 GGGNDTLTGGKDFDTYLFNIGDGSDVIVDAADKGIGNIAAFG 3063
Score = 44.8 bits (104), Expect = 0.054, Method: Composition-based stats.
Identities = 30/305 (9%), Positives = 77/305 (25%), Gaps = 11/305 (3%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
I + T + D G G + + G
Sbjct: 1931 ILTGYESDDTITGLDGNDLLKGGAGNDSLDGGTGNDYLSGGSGNDTYLFGRGSGSDVIEE 1990
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
P + D + + + + + A + A +
Sbjct: 1991 VANPATEQNIVQLGDGVGPDDLEFMVTGEDLFIAVKNSNDQLQIKGWFAAEPARIEELHF 2050
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
++ D L G + + SI G+ N
Sbjct: 2051 ADGTVWDRNAILSMMAVPTNTDDY---------LAGTPNGDLLNGGGGYDSIYGFGGNDI 2101
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + +VG GND + G + + +++ G + G + D + + ++
Sbjct: 2102 LIGGSEDDYIVGGQGNDTLDGGAGYDDLYDNDGTNRLSGGADED--YLEVAGGVNELDGG 2159
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
++ + F + + + + S +++ + + + D
Sbjct: 2160 ADSDRLLTTAGSNTIFFRRGDGFDYVETYLTSAYTVGDAVIFGEGIRPEDLSIQINDSSI 2219
Query: 382 SMKHF 386
S +
Sbjct: 2220 SGDGY 2224
Score = 42.5 bits (98), Expect = 0.27, Method: Composition-based stats.
Identities = 46/291 (15%), Positives = 89/291 (30%), Gaps = 20/291 (6%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN 103
++ +PN + A+ ++ D T FI + R +
Sbjct: 2785 LSNFDPNQADSGPRAIQTFT-FADGTSITYEDLVKNTFILQGDTTNDAIRGTNLSDRLYG 2843
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
++ +D G G T+ S E+ G D + ++ +
Sbjct: 2844 YEGSDWLDAGEGNDTLTSGTGDDELE---------GGTGNDAYVFNLGDGVDTISDSATL 2894
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
+ T + + + ++ G L N Y S ++ I
Sbjct: 2895 EEGNIIHFGAGITAADLRTRIDGNTLVIEYGNGGDAIILDNYDYSG---LNGSHVVEHIE 2951
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+ G I + + +D TE I G + I + V G +GND + G
Sbjct: 2952 FADG-------SIIRLASLVDPGTEGNDLIFGTPFDDVINAKGGDDEVYGLAGNDHLSGG 3004
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+ ++ D+ DG G DT Y + + ++ DA +
Sbjct: 3005 TGSDRLDGGDDEDIIDGGGGNDTLTGGKDFDTYLFNIGDGSDVIVDAADKG 3055
Score = 40.2 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 80/295 (27%), Gaps = 23/295 (7%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV------- 288
+ L + + I G N I + + G G+D + S +
Sbjct: 2318 TSPWWDKFLLGSVANDEIYGNFNNDKIDARDYDDYLNGQYGDDALSAGSGQDDVFGGDGD 2377
Query: 289 --FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-YDANEHKQDFLSDVERLR 345
G+D G G D + + I + D D L R
Sbjct: 2378 DVLAGGRGDDYLSGGFGNDVYAFNRGDGHDYIDNYPGTAYGETDTISFGVDILPADIR-- 2435
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY----EFGLSEGRDITFDS 401
ID+ + T + + F ++ +F + G + FD
Sbjct: 2436 ---ATIDTSTGNLVLSIAGTDDNITIPWTDPNNGFATLSASAIARVQFIDAGGSNRIFDL 2492
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
+ ++ D + + E +Y ++ + FA+
Sbjct: 2493 AGLIEAHKDELVAAATTPVSLFGADADTF--ELTGTVDAAGWQYAVAYAQTGDLFAEPNY 2550
Query: 462 LVQV-GKDHFSNFGCEEGRFVTF-DSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
L G D + ++ + D L GS DD + D T G
Sbjct: 2551 LYGSWGNDTITGRAGDDTLEGGYGDDRLAGGSGDDTYAYYQWDGNDTIDDVSTPG 2605
>gi|119358096|ref|YP_912740.1| hemolysin-type calcium-binding region [Chlorobium phaeobacteroides
DSM 266]
gi|119355445|gb|ABL66316.1| Hemolysin-type calcium-binding region [Chlorobium phaeobacteroides
DSM 266]
Length = 2467
Score = 93.7 bits (231), Expect = 9e-17, Method: Composition-based stats.
Identities = 62/475 (13%), Positives = 129/475 (27%), Gaps = 24/475 (5%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + +TE+ + + +L W ++ E SD + NG
Sbjct: 1116 DTYVVNDSLDVVTEVANEGIDSIQSSL-SWLLGANIENLELLGTSDSN--GTGNGLDNRI 1172
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ M + D G G + + + +G N V
Sbjct: 1173 TGNTGANMLVGAAGKDTLVGGAGNDILDGGSGADSMAGGVG-DDTYVVNYSRDVVMERAG 1231
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D + + S+ + G T + + + + + +L + +
Sbjct: 1232 EGTDLVQSGI-SWTLGDHVENLELTGTANTRGTGNDLGNRITGNSGRNTLDGGVGADSMA 1290
Query: 213 QKDSPFIQTIYD---------SGGDDLLDLTLI---GGVKNYIDLNTESWSSIGGYEKNM 260
+ D G DL+ ++ G ++L + S G E +
Sbjct: 1291 AGIGDDTYVVSDILDVVIEQAGEGTDLVRSSVSWTLGDNVENLELTGTANISGKGNEFDN 1350
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I +T +VG +G D ++G + N+ G D +G G DT+ +
Sbjct: 1351 RITGNTGANMLVGYAGKDTLVGGAGNDTLDGGVGADSMEGGKGDDTYVVNYSR--DVVME 1408
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ ++E L +++ L G D
Sbjct: 1409 RAGEGTDLVQSGTGWTLGDNIENLELTGTASTRGTGNSLNNLISGNGGNNILTGGEGNDT 1468
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ G D + G D ++ ++ E
Sbjct: 1469 LDGGMGSDNMAGGSGDDTYMVNEN--SDVVTEYADEGIDLVRSSVSWMLGDNIENLELSG 1526
Query: 440 FKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ I + D + + + G D + E+ D +Y+
Sbjct: 1527 AEDFIGIGNDCDNGITSGSGNDMLTGGAGNDTLNGGLGEDRLAGGGDDDVYVVDN 1581
Score = 81.8 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 68/513 (13%), Positives = 129/513 (25%), Gaps = 52/513 (10%)
Query: 86 NGYVCTPRYDSRYFMEINFDKA-DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
G T + + I + + G G T+ + +G N
Sbjct: 895 TGTANTRGTGNDHDNRITGNSGKNTLTGGAGNDTLDGGTGADSMSGGIG-DDTYVVNYSL 953
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
V + D D ++V S+ + + G T + + G
Sbjct: 954 DVVTENADEGCDRVQSNV-SWTLGSNVENLELTGTANTRGTGNELDNLIT--GNSGRNTL 1010
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEK 258
++ GDD D+ + + + + ++GG +
Sbjct: 1011 TGGDGNDTLDGGSGADSMSGGIGDDTYVVNCSLDVVTEFSGEGIDRVQSSTAWTLGGNFE 1070
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+ + T +G+ ++++IGNS N G D G G DT+ L +
Sbjct: 1071 NLEL-TGTTNTRGMGNELDNLIIGNSGRNTLDGGVGADSMLGGQGDDTYVVN--DSLDVV 1127
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV----------NVKQRSILEYTASY 368
N I + +++E L + ++L A
Sbjct: 1128 TEVANEGIDSIQSSLSWLLGANIENLELLGTSDSNGTGNGLDNRITGNTGANMLVGAAGK 1187
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L+ G D+ + G D Y R G+D + +
Sbjct: 1188 DTLVGGAGNDILDGGSGADSMAGGVGDDTY--VVNYSRDVVMERAGEGTDLVQSGISWTL 1245
Query: 429 HGVKEGRNPDAF--------------------KALEYIASHEDLINAFADAPDLVQVGKD 468
E L+ + + D +V D
Sbjct: 1246 GDHVENLELTGTANTRGTGNDLGNRITGNSGRNTLDGGVGADSMAAGIGDDTYVVSDILD 1305
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY------ITHGVKEGRNPD 522
E V LG + + G+ + + G
Sbjct: 1306 VVIEQAGEGTDLVRSSVSWTLGDNVENLELTGTANISGKGNEFDNRITGNTGANMLVGYA 1365
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
L A ++ L G D +
Sbjct: 1366 GKDTLVGGAGNDTLDGGVGADSMEGGKGDDTYV 1398
Score = 81.0 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 68/585 (11%), Positives = 130/585 (22%), Gaps = 64/585 (10%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDI-TELNPNAQEVARWALGEWSKVVDLTFEE 72
+ L ++ D S D+ TE + + + + W+ + FE
Sbjct: 1015 GNDTLDGGSGADSMSGGIGDDTYVVNCSLDVVTEFSGEGIDRVQSS-TAWT--LGGNFEN 1071
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ N +S AD G G T + +++L +
Sbjct: 1072 LELTGTTNTRGMGNELDNLIIGNSGRNTLDGGVGADSMLGGQGDDTYVVNDSLDVVT--- 1128
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
N G + + + ++ + T + +
Sbjct: 1129 -----EVANEGIDSIQSSLSWLLGANIENLELLGTSDSNGTGNGLDNRIT-GNTGANMLV 1182
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY------IDLN 246
G G ++ GDD + DL
Sbjct: 1183 GAAGKDTLVGG----AGNDILDGGSGADSMAGGVGDDTY-VVNYSRDVVMERAGEGTDLV 1237
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S G T G+ + + GNS N G D G DT
Sbjct: 1238 QSGISWTLGDHVENLELTGTANTRGTGNDLGNRITGNSGRNTLDGGVGADSMAAGIGDDT 1297
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV----------NV 356
+ L + + +VE L S
Sbjct: 1298 YVV--SDILDVVIEQAGEGTDLVRSSVSWTLGDNVENLELTGTANISGKGNEFDNRITGN 1355
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
++L A + L+ G D + +G D Y R G
Sbjct: 1356 TGANMLVGYAGKDTLVGGAGNDTLDGGVGADSMEGGKGDDTY--VVNYSRDVVMERAGEG 1413
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKA--LEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
+D + + E + + + + + G D
Sbjct: 1414 TDLVQSGTGWTLGDNIENLELTGTASTRGTGNSLNNLISGNGGNNILTGGEGNDTLDGGM 1473
Query: 475 CEEGRFVTFDSYLYLGS-YDDLRNVF---GSDRGAAARHYITHGVKEGRNPDA------- 523
+ Y+ + D+ + G D ++ ++ E
Sbjct: 1474 GSDNMAGGSGDDTYMVNENSDVVTEYADEGIDLVRSSVSWMLGDNIENLELSGAEDFIGI 1533
Query: 524 -------------FKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
L A ++ L + D +
Sbjct: 1534 GNDCDNGITSGSGNDMLTGGAGNDTLNGGLGEDRLAGGGDDDVYV 1578
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/441 (11%), Positives = 104/441 (23%), Gaps = 32/441 (7%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
FE + + N +S + D G+G +++
Sbjct: 798 NFENLELLGTSNTKGTGNDLDNRIIGNSGRNTLVGGAGNDTLDGGVGADSMVGGIGDDI- 856
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
N V + D D +S + + + G T +
Sbjct: 857 ---------YVVNYSLDVVTENADEGIDLVQSST-GWTLGANLENLELTGTANTRGTGND 906
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID---- 244
+ + K +L ++ GDD + +
Sbjct: 907 HDNRITGNSGKNTLTGGA--GNDTLDGGTGADSMSGGIGDDTY-VVNYSLDVVTENADEG 963
Query: 245 -----------LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
L + + N + + + G+SG + + G N+ S
Sbjct: 964 CDRVQSNVSWTLGSNVENLELTGTANTRGTGNELDNLITGNSGRNTLTGGDGNDTLDGGS 1023
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G D G G DT+ L + F I + + E L
Sbjct: 1024 GADSMSGGIGDDTYVVNCS--LDVVTEFSGEGIDRVQSSTAWTLGGNFENLELTGTTNTR 1081
Query: 354 V-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
+ +++ + L +G D + + +++ D+ +
Sbjct: 1082 GMGNELDNLIIGNSGRNTLDGGVGADSMLGGQGDDTYVVNDSLDVVTEVANEGIDSIQSS 1141
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ + G + L+ A + G D
Sbjct: 1142 LSWLLGANIENLELLGTSDSNGTGNGLDNRITGNTGANMLVGAAGKDTLVGGAGNDILDG 1201
Query: 473 FGCEEGRFVTFDSYLYLGSYD 493
+ Y+ +Y
Sbjct: 1202 GSGADSMAGGVGDDTYVVNYS 1222
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 65/538 (12%), Positives = 128/538 (23%), Gaps = 50/538 (9%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
N +V + + D+ R G G T+ I G N G
Sbjct: 535 GNSFVNNLEGEGGNDYLYGLEGNDMIRGGAGNDTVDGGAGNDLIEGGSGDDVYVVDNPGD 594
Query: 145 PV---YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ + D ++ S+ D +A+ + + I G+
Sbjct: 595 TIVELFNEGVDLVRSEVSWTLGSHLENLDLPGNANNNGSGNTLDNRITGNSGKNSLMGGA 654
Query: 202 LGNNIYK--IEVQQKDSPFIQTIYDSGGDD-----LLDLTLIGGVKNYIDLNTESWSSIG 254
+ ++ + + ++ G+D + ++ + IDL + S
Sbjct: 655 GNDTLFGAEGDDTLEGGTGADSMAGGMGNDLFIADTILDVVMEQAEEGIDLVRSNVSWTL 714
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
T +G+ ++ + GNS N G D G G DT+
Sbjct: 715 SAHVEHLELLGTASTCGMGNELDNRITGNSGRNTLDGGVGADSMSGGIGDDTYVVDNS-- 772
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQ 373
L + F + + E L + + + L+
Sbjct: 773 LDVVAEFVGEGCDQVRSNGSWMLGGNFENLELLGTSNTKGTGNDLDNRIIGNSGRNTLVG 832
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D + G DI Y G D ++ + E
Sbjct: 833 GAGNDTLDGGVGADSMVGGIGDDIY--VVNYSLDVVTENADEGIDLVQSSTGWTLGANLE 890
Query: 434 GRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+ D + G D + Y+ +
Sbjct: 891 NLELTGTANTRGTGNDHDNRITGNSGKNTLTGGAGNDTLDGGTGADSMSGGIGDDTYVVN 950
Query: 492 YD-------------DLRNVFGSDRGAAARHYITHGVKEGRN------------------ 520
Y +++ G+ + G R
Sbjct: 951 YSLDVVTENADEGCDRVQSNVSWTLGSNVENLELTGTANTRGTGNELDNLITGNSGRNTL 1010
Query: 521 --PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSY 576
D L+ + + + D +V D + F E + + L
Sbjct: 1011 TGGDGNDTLDGGSGADSMSGGIGDDTYVVNCSLDVVTEFSGEGIDRVQSSTAWTLGGN 1068
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 68/446 (15%), Positives = 122/446 (27%), Gaps = 48/446 (10%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+G +YG D D D + Y + G +D +
Sbjct: 417 GTDGSDVIYGYDGDDTLDGGADNDTLYGGAGFDSISGGDG-------NDTLDGGDGKDVM 469
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G G+++Y + + + D+ +L TL G V+N I N + S G
Sbjct: 470 AGGKGHDLYVVNDFDEVVEYADEGNDTVQSKILMYTLPGNVENLILDNGSNVFSGIGNSL 529
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYA 311
+ I ++ + ++ G GND + G N++ +GND DG +G D Y
Sbjct: 530 SNIIIGNSFVNNLEGEGGNDYLYGLEGNDMIRGGAGNDTVDGGAGNDLIEGGSGDDVYVV 589
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----------CIDSVNVKQRSI 361
+ I N + +E S +E L ++
Sbjct: 590 DNPGDTIVELFNEGVDLVRSEVSWTLGSHLENLDLPGNANNNGSGNTLDNRITGNSGKNS 649
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L A + L G D E G D+ + + G D
Sbjct: 650 LMGGAGNDTLFGAEGDDTLEGGTGADSMAGGMGNDLFIADT--ILDVVMEQAEEGIDLVR 707
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ + E + + + D G++ +
Sbjct: 708 SNVSWTLSAHVEHLELLGTASTCGMGNELD-------NRITGNSGRNTLDGGVGADSMSG 760
Query: 482 TFDSYLYLGSYD-DLRNVF---GSDRGAAARHYITHGVKEGRNP--------DAFKALEY 529
Y+ D+ F G D+ + ++ G E
Sbjct: 761 GIGDDTYVVDNSLDVVAEFVGEGCDQVRSNGSWMLGGNFENLELLGTSNTKGTGNDLDNR 820
Query: 530 IASH---EDLINAFADAPDLVQAGKD 552
I + L+ + G D
Sbjct: 821 IIGNSGRNTLVGGAGNDTLDGGVGAD 846
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/395 (13%), Positives = 97/395 (24%), Gaps = 34/395 (8%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E + + + + N + + + D G+G + +
Sbjct: 1433 ELTGTASTR--GTGNSLNNLISGNGGNNILTGGEGNDTLDGGMGSDNMAGGSGDD----- 1485
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
N V D D +SV S+ + + G + +
Sbjct: 1486 -----TYMVNENSDVVTEYADEGIDLVRSSV-SWMLGDNIENLELSGAEDFIGIGNDCDN 1539
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-----VKNYIDLN 246
G+ L + G DD+ + IDL
Sbjct: 1540 GITSGSGNDMLTGGA--GNDTLNGGLGEDRLAGGGDDDVYVVDNHFDIVMEHTDEGIDLV 1597
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF---------ESSGNDV 297
S S G T +S G+ ++ + GNS NN+ SG+D
Sbjct: 1598 RSSISWTLGDHVENLELLGTADDSGTGNELDNRITGNSGNNMLTGGDGDDILDGGSGSDS 1657
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF-ADQCIDSVNV 356
G SG D + + + + I + ++ E L I
Sbjct: 1658 MAGGSGDDLYVV--SESGDVVTEYADEGIDLVRSGVSWSLETNFENLELIGTANITGTGN 1715
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ + + LI G D + G D+ + G G
Sbjct: 1716 ELDNRITGNNGKNTLIGGSGDDTLDGRSGVDSMSGGVGDDVYVVTES--GDVVTEYADEG 1773
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
D + + E + D
Sbjct: 1774 IDMVQSNVSWTLGANIENLELLGTSNSSGTGNELD 1808
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 68/498 (13%), Positives = 125/498 (25%), Gaps = 70/498 (14%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYIDLNTESWS 251
++ +++ + + T+ GDD LD ++ G Y+ +
Sbjct: 1968 TANITGTGNELDNRITGNNGKNTLIGGSGDDTLDGRSGVDSMSGGVGDDVYVVTESGDVV 2027
Query: 252 SIGGYEK------NMTIAQHTVIESV----------VGSSGNDVVIGNSANNVFFESSGN 295
+ E N++ IE++ G+ ++ + GNS N G
Sbjct: 2028 TEYADEGIDMVQSNVSWTLGANIENLELLGTSNSSGTGNELDNCITGNSEKNTLNGGLGE 2087
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G D + + + I + VE L DS
Sbjct: 2088 DRLAGGGDDDVYVVDNHF--DTVMEHTDEGIDLVRSSISWTLGDHVENLELLGTADDSGT 2145
Query: 356 VK-QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ + + L G D+ + G D+ S G
Sbjct: 2146 GNELDNRITGNSGNNMLTGGDGDDILDGGSGSDSMAGGSGDDLYVVSES--GDVVTEYAD 2203
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSN 472
G D + + E + + D L + + G D
Sbjct: 2204 EGIDLVRSGVSWSLETNFENLELIGTANITGTGNELDNYLTGNSGNNQLSGRAGNDTLDG 2263
Query: 473 FGCEEGRFVTFDSYLYLGSYDDL----RNVFGSDRGAAARHYITHGVKEGRNP------- 521
+ + +Y+ + G D A+ ++ E
Sbjct: 2264 GVGTDSMTGGTGNDIYVVNTSSDVVIEHEGEGDDFVLASVNWSLGSNTEYLALIGNGNTN 2323
Query: 522 -------------DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
+ + L+ +A ++ LI A G+D F +
Sbjct: 2324 GDGNDFDNIIIGNNGWNTLKGMAGNDVLIGGSAADNLTGGDGRDIFLYN----------S 2373
Query: 569 PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADL 628
+ D+ F I E G Q + L A
Sbjct: 2374 VSDSSINSADVITDFTGGADKIDLSGIDANSIE------EGNQSFDSVILDGSDTFYAQG 2427
Query: 629 SLSFDHKKVDLYTDYFGD 646
L FD LY + D
Sbjct: 2428 QLRFDSVTGILYGNTDND 2445
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 63/265 (23%), Gaps = 33/265 (12%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + + I + +++ G + ND + G + + GND DG G D
Sbjct: 414 YVPGTDGSDVIYGYDGDDTLDGGADNDTLYGGAGFDSISGGDGNDTLDGGDGKDVMAGGK 473
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLS----------DVERLRFADQC----------- 350
LY + F+ V + + D + +VE L +
Sbjct: 474 GHDLYVVNDFD---EVVEYADEGNDTVQSKILMYTLPGNVENLILDNGSNVFSGIGNSLS 530
Query: 351 ---------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ L + + G D + G D+
Sbjct: 531 NIIIGNSFVNNLEGEGGNDYLYGLEGNDMIRGGAGNDTVDGGAGNDLIEGGSGDDVYVVD 590
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
+ R + +H +A +
Sbjct: 591 NPGDTIVELFNEGVDLVRSEVSWTLGSHLENLDLPGNANNNGSGNTLDNRITGNSGKNSL 650
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSY 486
+ G D ++ +
Sbjct: 651 MGGAGNDTLFGAEGDDTLEGGTGAD 675
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 60/429 (13%), Positives = 112/429 (26%), Gaps = 34/429 (7%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE ++ R + WS + E ++I + N
Sbjct: 1665 DLYVVSESGDVVTEYADEGIDLVRSGV-SWSLETNFENLELIGTANIT--GTGNELDNRI 1721
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ I D G ++ V D
Sbjct: 1722 TGNNGKNTLIGGSGDDTLDGRSGVDSMSGGVGDDV----------YVVTESGDVVTEYAD 1771
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D ++V S+ + + G + + + G + + N +
Sbjct: 1772 EGIDMVQSNV-SWTLGANIENLELLGTSNSSGTGNELDNCIT-GNSEKNTLNGGLGEDRL 1829
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ D+ D +++ T G IDL S S G T +S
Sbjct: 1830 AGGGDDDVYVVDNHFDTVMEHTDEG-----IDLVRSSISWTLGDHVENLELLGTADDSGT 1884
Query: 273 GSSGNDVVIGNSANNVFF---------ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G+ ++ + GNS NN+ SG+D G SG D + + + +
Sbjct: 1885 GNELDNRITGNSGNNMLTGGDGDDILDGGSGSDSMAGGSGDDLYVV--SESGDVVTEYAD 1942
Query: 324 AIIVYDANEHKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
I + ++ E L I + + + LI G D +
Sbjct: 1943 EGIDLVRSGVSWSLETNFENLELIGTANITGTGNELDNRITGNNGKNTLIGGSGDDTLDG 2002
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G D+ + G G D + + E
Sbjct: 2003 RSGVDSMSGGVGDDVYVVTES--GDVVTEYADEGIDMVQSNVSWTLGANIENLELLGTSN 2060
Query: 443 LEYIASHED 451
+ D
Sbjct: 2061 SSGTGNELD 2069
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 60/411 (14%), Positives = 110/411 (26%), Gaps = 34/411 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE ++ R + WS + E ++I + N
Sbjct: 1926 DLYVVSESGDVVTEYADEGIDLVRSGV-SWSLETNFENLELIGTANIT--GTGNELDNRI 1982
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ I D G ++ V D
Sbjct: 1983 TGNNGKNTLIGGSGDDTLDGRSGVDSMSGGVGDDV----------YVVTESGDVVTEYAD 2032
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D ++V S+ + + G + + + G + + N +
Sbjct: 2033 EGIDMVQSNV-SWTLGANIENLELLGTSNSSGTGNELDNCIT-GNSEKNTLNGGLGEDRL 2090
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ D+ D +++ T G IDL S S G T +S
Sbjct: 2091 AGGGDDDVYVVDNHFDTVMEHTDEG-----IDLVRSSISWTLGDHVENLELLGTADDSGT 2145
Query: 273 GSSGNDVVIGNSANNVFF---------ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G+ ++ + GNS NN+ SG+D G SG D + + + +
Sbjct: 2146 GNELDNRITGNSGNNMLTGGDGDDILDGGSGSDSMAGGSGDDLYVV--SESGDVVTEYAD 2203
Query: 324 AIIVYDANEHKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
I + ++ E L I + + L + L G D +
Sbjct: 2204 EGIDLVRSGVSWSLETNFENLELIGTANITGTGNELDNYLTGNSGNNQLSGRAGNDTLDG 2263
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G DI G D A+ ++ E
Sbjct: 2264 GVGTDSMTGGTGNDIY--VVNTSSDVVIEHEGEGDDFVLASVNWSLGSNTE 2312
>gi|7160624|emb|CAB76450.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
parapertussis]
Length = 1706
Score = 93.7 bits (231), Expect = 9e-17, Method: Composition-based stats.
Identities = 65/492 (13%), Positives = 119/492 (24%), Gaps = 63/492 (12%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S D+ + G TI + LGL +G D
Sbjct: 1138 GSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 1197
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + G Y + +
Sbjct: 1198 SDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMGYY--DSVR 1255
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
I G + + +++ G + T+ + + G
Sbjct: 1256 SVENVI-----------------GTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFG 1298
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----- 328
GND++ G++ N+ + G+D +G +G D F + V
Sbjct: 1299 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAG 1358
Query: 329 ---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+A D +S +E + + Q ++
Sbjct: 1359 AHAGVATGRIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANV 1418
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L + L G DV + + GRD + + D N G+
Sbjct: 1419 LRGAGGADVLAGGEGDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANA-GNLLDG 1477
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ GR DA +++ + A H N V
Sbjct: 1478 GDGNDTVDFSGPGRGLDAGAKGVFLSLGKG--FASLMDEPETSNVLRHIENAVGSVRDDV 1535
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
D + G + L A ++DL
Sbjct: 1536 LI---------GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQG 1586
Query: 542 DAPDLVQAGKDH 553
D L AG H
Sbjct: 1587 DDTYLFGAGYGH 1598
Score = 83.7 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 93/374 (24%), Gaps = 38/374 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYN 141
+ T D D+ G G + + LG L +
Sbjct: 1271 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGND 1330
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++D + Y A+ +++D+ A + GS
Sbjct: 1331 WFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLG-ILADLGAGRVDKLGEAGS 1389
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + I G + + + G E +
Sbjct: 1390 SAYDTVSGIENVVGTELADRI-------------TGDAQANVLRGAGGADVLAGGEGDDV 1436
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------ 313
+ + + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 1437 LLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAG 1496
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ L +E + + + ++L A + L
Sbjct: 1497 AKGVFLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSG 1556
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G DV + G D DL G D Y + E
Sbjct: 1557 GAGDDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGAGYGHDTIYE 1603
Query: 434 GRNPDAFKALEYIA 447
+ A
Sbjct: 1604 SGGGHDTIRINAGA 1617
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/365 (11%), Positives = 73/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 1135 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 1194
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 1195 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMGYYDSV 1254
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
VE + Q + + + L G D+
Sbjct: 1255 RSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 1314
Query: 390 GLSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 1315 YGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLGILA 1374
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 1375 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 1432
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G + L A + L D A G +
Sbjct: 1433 ----------GDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGND 1482
Query: 564 SITFN 568
++ F+
Sbjct: 1483 TVDFS 1487
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 53/377 (14%), Positives = 99/377 (26%), Gaps = 53/377 (14%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA--- 131
+ + +F + + DV R G G T+ A G A
Sbjct: 1308 DAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGR 1367
Query: 132 LGLMHPGSYNGGYPV-YGVDNDYENDSFLTSVMSYFMP--QDSMMDASFGYCATPMVSDI 188
+GL G G D+ DA +D+
Sbjct: 1368 IGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 1427
Query: 189 VA------VQKIYGAPKGSLGN-----------NIYKIEVQQKDSPFIQTIYDSGGDDLL 231
+A V G+ + + + + G+D +
Sbjct: 1428 LAGGEGDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLD---GGDGNDTV 1484
Query: 232 DLTLIGGV------KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
D + G ++ L S + E + + IE+ VGS +DV+IG++
Sbjct: 1485 DFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRH---IENAVGSVRDDVLIGDAG 1541
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
NV +GNDV G +G D + ++
Sbjct: 1542 ANVLNGLAGNDVLSGGAGDD--VLLGDEGSDLLSGDAGNDDLFGGQGDDTYLF------- 1592
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGRDITFDS-YL 403
+I E ++ + G D + + G D
Sbjct: 1593 -------GAGYGHDTIYESGGGHDTIRINAGADQLWFARQGNDLEIRILGTDDALTVHDW 1645
Query: 404 YLGSYDDLRNVFGSDRG 420
Y + + + +++
Sbjct: 1646 YRDADHRVEAIHAANQA 1662
Score = 42.9 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 47/176 (26%), Gaps = 29/176 (16%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVF-DGSSGL-DTFFYYAPSYLYKIYRFENAIIVY 328
V+G G+DVV+ N++ + +G + + G D+ A + + + N VY
Sbjct: 911 VIGGDGDDVVLANASRIHYDGGAGTNTVSYAALGRQDSITVSADGERFNVRKQLNNANVY 970
Query: 329 ---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ D L V+ + +
Sbjct: 971 REGVATQKTAYGKRTENVQYRHVELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDNF 1030
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L A + L G D + G D+ + D +
Sbjct: 1031 LAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGVWSNQLDGGAGVDT 1086
>gi|189499488|ref|YP_001958958.1| RTX toxins and related Ca2+-binding protein [Chlorobium
phaeobacteroides BS1]
gi|189494929|gb|ACE03477.1| RTX toxins and related Ca2+-binding protein [Chlorobium
phaeobacteroides BS1]
Length = 1279
Score = 93.3 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 62/499 (12%), Positives = 124/499 (24%), Gaps = 36/499 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
T + + D G G + +I G
Sbjct: 628 YGGAGNDYLYGQDDNDTLLGEEGNDYLNGGNGDDALDAGSGDNKVYGGAGNDKITAGDGD 687
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G + G + + M Y + D +G+ + +
Sbjct: 688 DIMSGDDGNDTITGNGGNDRISGGKGTDMLYGG---TGDDYLYGHDGNDTLFGEEGNDYL 744
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+G + + + GDD + G N + +
Sbjct: 745 HGGNGDDALD-AGNGNNKVYGGTGNDKMTAGDGDD----IMSGEDGNDTIIGNGGDDRLY 799
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G ++ + + G+ ND + G ++ SG+D D G + +
Sbjct: 800 GGAGTDRLSGGNGNDYLYGNDDNDALSGGGGDDYLHGGSGDDKLDAGEGNNRVY--GGDG 857
Query: 315 LYKIYRFENAIIVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
++ E I+ + ++L L + L+
Sbjct: 858 NDEMTAGEGNDIISGEGGIDIITGNGGNDKLYGGAGEDFVKGGTGDDYLYGQDDNDTLLG 917
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD----RGAAARHYITH 429
G D + EG + +Y G+ +DL G D I +
Sbjct: 918 EEGDDYLHGGNGDDKLDAGEGNN-----RVYGGAGNDLIVAIGGDDRLSGDDGDDIIIAN 972
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYL 487
G + +D + L + + N G + + D +
Sbjct: 973 GGNDRLYGGNGSDTLGAGEGDDYLYGNDGNDLLYGEAGNDYLNAGNGDDTAIGGSGDDLI 1032
Query: 488 YLGSYDDLRN--------------VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
Y + +D+ + S + R Y G + D L +
Sbjct: 1033 YGQNGNDVLSGEEGNDRIYGGNDNDTLSGGEGSDRLYGQDGTDQLYGEDGNDYLNGGNGN 1092
Query: 534 EDLINAFADAPDLVQAGKD 552
+ L+ D G D
Sbjct: 1093 DTLLGGEGDDRLYGNEGDD 1111
Score = 90.2 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 61/496 (12%), Positives = 117/496 (23%), Gaps = 30/496 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ D D G I + G
Sbjct: 664 DAGSGDNKVYGGAGNDKITAGDGDDIMSGDDGNDTITGNGGNDRISGGKGTDMLYGGTGD 723
Query: 135 MHPGSYNGGYPVYGV-DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ ++G ++G NDY + + + + + T D + +
Sbjct: 724 DYLYGHDGNDTLFGEEGNDYLHGGNGDDALDAGNGNNKVYGGTGNDKMTAGDGDDIMSGE 783
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+GN + + + G+D L G N +
Sbjct: 784 D--GNDTIIGN---GGDDRLYGGAGTDRLSGGNGNDYL----YGNDDNDALSGGGGDDYL 834
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF----- 308
G + + V G GND + N++ G D+ G+ G D +
Sbjct: 835 HGGSGDDKLDAGEGNNRVYGGDGNDEMTAGEGNDIISGEGGIDIITGNGGNDKLYGGAGE 894
Query: 309 --YYAPSYLYKIYRFENAIIVYD----------ANEHKQDFLSDVERLRFADQCIDSVNV 356
+ +Y ++ + + K D R+ V +
Sbjct: 895 DFVKGGTGDDYLYGQDDNDTLLGEEGDDYLHGGNGDDKLDAGEGNNRVYGGAGNDLIVAI 954
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
L + +I G D G EG D + + Y + N +
Sbjct: 955 GGDDRLSGDDGDDIIIANGGNDRLYGGNGSDTLGAGEGDDYLYGNDGNDLLYGEAGNDYL 1014
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ G + L ++ + + G D
Sbjct: 1015 NAGNGDDTAIGGSGDDLIYGQNGNDVLSGEEGNDRIYGGNDNDTLSGGEGSDRLYGQDGT 1074
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ + D YL + + G + Y G + L ++ L
Sbjct: 1075 DQLY-GEDGNDYLNGGNGNDTLLGGEGDDRL--YGNEGDDILYGENGNDLLYGENGNDIL 1131
Query: 537 INAFADAPDLVQAGKD 552
I G D
Sbjct: 1132 IGGDGSDILRGGNGDD 1147
Score = 82.1 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/409 (13%), Positives = 98/409 (23%), Gaps = 31/409 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D NG + + D + + G
Sbjct: 781 SGEDGNDTIIGNGGDDRLYGGAGTDRLSGGNGNDYLYGNDDNDALSGGGGDDYLHGGSGD 840
Query: 135 MHPGSYNGGYPVYGVDND------YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
+ G VYG D + ND + + D +G V
Sbjct: 841 DKLDAGEGNNRVYGGDGNDEMTAGEGNDIISGEGGIDIITGNGGNDKLYGGAGEDFVKGG 900
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYI 243
+YG ++ GDD LD + GG N +
Sbjct: 901 TGDDYLYGQDD----------NDTLLGEEGDDYLHGGNGDDKLDAGEGNNRVYGGAGNDL 950
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + G + + I + + + G +G+D + ++ + + GND+ G +G
Sbjct: 951 IVAIGGDDRLSGDDGDDIIIANGGNDRLYGGNGSDTLGAGEGDDYLYGNDGNDLLYGEAG 1010
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D Y + + ++ D LS E L
Sbjct: 1011 ND----YLNAGNGDDTAIGGSGDDLIYGQNGNDVLSGEE------GNDRIYGGNDNDTLS 1060
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ L G D G D Y + +
Sbjct: 1061 GGEGSDRLYGQDGTDQLYGEDGNDYLNGGNGNDTLLGGEGDDRLYGNEGDDILYGENGND 1120
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
Y +G D L + L+ Q G DH +
Sbjct: 1121 LLYGENGNDILIGGDGSDILRGGNGDDILLGGEGSDLLYGQDGNDHLIS 1169
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/365 (13%), Positives = 100/365 (27%), Gaps = 26/365 (7%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ GDD L G + I E I G + N + + V G
Sbjct: 530 GGEGNDILSGGAGDDKL----YGQEGSDIIAGQEGNDYIHGGDDNDYLHAGSGNNRVYGG 585
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SG+D++I ++ GND G G D + + +Y +Y +++
Sbjct: 586 SGDDMLIAEDGDDSMSGDDGNDTLTGGGGDDRLY--GGTGADTLYGGAGNDYLYGQDDND 643
Query: 335 QDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ L + + + A + + G D+ +
Sbjct: 644 TLLGEEGNDYLNGGNGDDALDAGSGDNKVYGGAGNDKITAGDGDDIMSGDDGNDTITGNG 703
Query: 394 GRDITF----DSYLYLGSYDDLRNVFGSDRGAAARH-----YITHGVKEGRNPDAFKALE 444
G D LY G+ DD + + +G + +
Sbjct: 704 GNDRISGGKGTDMLYGGTGDDYLYGHDGNDTLFGEEGNDYLHGGNGDDALDAGNGNNKVY 763
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEE--------GRFVTFDSYLYLGSYDDLR 496
++ + D + G D G ++ R + YL DD
Sbjct: 764 GGTGNDKMTAGDGDDIMSGEDGNDTIIGNGGDDRLYGGAGTDRLSGGNGNDYLYGNDDND 823
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
+ G G + + + ++++ + + G D +
Sbjct: 824 ALSGGGGDDYLH--GGSGDDKLDAGEGNNRVYGGDGNDEMTAGEGNDIISGEGGIDIITG 881
Query: 557 FGYEE 561
G +
Sbjct: 882 NGGND 886
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/348 (15%), Positives = 92/348 (26%), Gaps = 27/348 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ I S G + + D + G G + + + G
Sbjct: 862 TAGEGNDIISGEGGIDIITGNGGNDKLYGGAGEDFVKGGTGDDYLYGQDDNDTLLGEEGD 921
Query: 135 MHPGSYN----------GGYPVYGVDNDYENDSFLTSVMSYFMPQ-----DSMMDASFGY 179
+ N G ND +S + D +G
Sbjct: 922 DYLHGGNGDDKLDAGEGNNRVYGGAGNDLIVAIGGDDRLSGDDGDDIIIANGGNDRLYGG 981
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ + +YG G+ T GDDL+ G
Sbjct: 982 NGSDTLGAGEGDDYLYG-NDGNDLLYGEAGNDYLNAGNGDDTAIGGSGDDLI----YGQN 1036
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
N + E I G N T++ + + G G D + G N+ +GND
Sbjct: 1037 GNDVLSGEEGNDRIYGGNDNDTLSGGEGSDRLYGQDGTDQLYGEDGNDYLNGGNGNDTLL 1096
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK-QDFLSDVERLRFADQCIDSVNVKQ 358
G G D + +Y ++Y N + + LR + + +
Sbjct: 1097 GGEGDDRLY--GNEGDDILYGENGNDLLYGENGNDILIGGDGSDILRGGNGDDILLGGEG 1154
Query: 359 RSILEYTASYEDLIQ--VIGQDVFESMKHFYEFGLS--EGRDITFDSY 402
+L + LI D+ + F + G D+ D
Sbjct: 1155 SDLLYGQDGNDHLISLDDSDNDIMKGGNGSDRFYFTALNGNDLISDFS 1202
>gi|296114328|ref|ZP_06832982.1| glycosyl transferase [Gluconacetobacter hansenii ATCC 23769]
gi|295979089|gb|EFG85813.1| glycosyl transferase [Gluconacetobacter hansenii ATCC 23769]
Length = 980
Score = 93.3 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 89/269 (33%), Gaps = 22/269 (8%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYL 405
D I + + + D + + +FG + G FD Y
Sbjct: 5 DLAIKHDWACFNASWYKQHYHAVISAFDLHDDGSIFRFYKDFGENLGHSPNMFFDEEWYR 64
Query: 406 GSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDAFKALEYIAS----HEDLINAFADAP 460
Y D+ ++ S + + HY +G K+ F Y + + + A
Sbjct: 65 MVYPDVLSLIESGKVSSGFEHYHQYGCKDRNPNCFFDEEFYCRTQVCMSPEQLEAHG--- 121
Query: 461 DLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD-LRNVFGSDRGAAARHYITHGVKE 517
++ G DHF +G E R + F + L++ D L + A + H V E
Sbjct: 122 --LRNGYDHFLRYGAHEKRDASLFFSTTLFIRENPDFLYDERNGIFAAFLENATDHTVVE 179
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTS 575
R F Y+ ++ D+ D Q H+ E + F+ Y
Sbjct: 180 RRTSAYFDPEWYMRAYPDMSRHI----DEWQHPLRHYLGNPSPEAFDPNPFFSERFYTQG 235
Query: 576 YDDLWNVFGSD-RSAAAQHYITHGMKEGR 603
D+ V A +H+I +G E R
Sbjct: 236 NPDVTAVIADGCFRNAYEHFIRYGQYEDR 264
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 83/239 (34%), Gaps = 22/239 (9%)
Query: 399 FDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAF 456
F++ Y Y + + F D G+ R Y G G +P+ F Y + D+++
Sbjct: 15 FNASWYKQHYHAVISAFDLHDDGSIFRFYKDFGENLGHSPNMFFDEEWYRMVYPDVLSLI 74
Query: 457 ADAPDLVQVGKDHFSNFG-CEEGRFVTFDSYLYLGSY----DDLRNVFGSDRGAAARHYI 511
V G +H+ +G + FD Y + + G G H++
Sbjct: 75 ESG--KVSSGFEHYHQYGCKDRNPNCFFDEEFYCRTQVCMSPEQLEAHGLRNG--YDHFL 130
Query: 512 THGVKEGRNPDAF-KALEYIASHEDLI--NAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
+G E R+ F +I + D + ++ DH E S F+
Sbjct: 131 RYGAHEKRDASLFFSTTLFIRENPDFLYDERNGIFAAFLENATDH---TVVERRTSAYFD 187
Query: 569 PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKAD 627
P+ Y+ +Y D+ + +HY+ + E F S ++ + D
Sbjct: 188 PEWYMRAYPDMSR-HIDEWQHPLRHYLGNPSPE----AFDPNPFFSERFYTQGNPDVTA 241
>gi|209522963|ref|ZP_03271520.1| outer membrane adhesin like proteiin [Arthrospira maxima CS-328]
gi|209496550|gb|EDZ96848.1| outer membrane adhesin like proteiin [Arthrospira maxima CS-328]
Length = 2722
Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 72/265 (27%), Gaps = 15/265 (5%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+ + G+D + + + + I G + I +S+ G+ GND +
Sbjct: 173 SGVGTEGNDTILGSDFNDAID----GVGGNNIIFGLGGDDFIRGGDGADSINGNDGNDTI 228
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G ++ GND+ G G D F ++ +Y + +
Sbjct: 229 YGGDGDDCIRGGQGNDLIFGEGGNDLLF--GDKDADILFGVSGNNTMYGGRGNDSLIGGE 286
Query: 341 VERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ L F D V + L A + L G D+ E +G D F
Sbjct: 287 NDDLMFGDKGSDTLVAGGGNNTLYGGADNDFLFGGTGNDLLFGDDGNDELVGGKGNDTIF 346
Query: 400 ----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
D ++ G +D+ + + G L +
Sbjct: 347 GGPGDDIIFGGDGNDILRGGKGNDRL----FGDEGNDLLEGGRGVDTLTGGGGRNIFVVG 402
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRF 480
+ + G
Sbjct: 403 LVVSASEGGGSVITGTTGGASPELA 427
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 11/156 (7%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T+Y G+D +LIGG + + + ++ N T+ + + G
Sbjct: 266 GVSGNNTMYGGRGND----SLIGGENDDLMFGDKGSDTLVAGGGNNTLYGGADNDFLFGG 321
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+GND++ G+ N+ GND G G D F + + ++ +
Sbjct: 322 TGNDLLFGDDGNDELVGGKGNDTIFGGPGDDIIF--GGDGNDILRGGKGNDRLF--GDEG 377
Query: 335 QDFL---SDVERLRFADQCIDSVNVKQRSILEYTAS 367
D L V+ L V S E S
Sbjct: 378 NDLLEGGRGVDTLTGGGGRNIFVVGLVVSASEGGGS 413
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 66/284 (23%), Gaps = 58/284 (20%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
VG+ GND ++G+ N+ GN++ G G D F I N
Sbjct: 175 VGTEGNDTILGSDFNDAIDGVGGNNIIFGLGGDD--FIRGGDGADSI--NGNDGNDTIYG 230
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D +R +L + L V G + +
Sbjct: 231 GDGDD------CIRGGQGNDLIFGEGGNDLLFGDKDADILFGVSGNNTMYGGRGNDSLIG 284
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
E D+ F D L G++ Y L +++
Sbjct: 285 GENDDLMFGDKG----SDTLVAGGGNNTL-----YGGADNDFLFGGTGNDLLFGDDGNDE 335
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
L+ + G D +FG D
Sbjct: 336 LVGGKGNDTIFGGPGDD----------------------------IIFGGD--------- 358
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G R L ++ L G++ F
Sbjct: 359 --GNDILRGGKGNDRLFGDEGNDLLEGGRGVDTLTGGGGRNIFV 400
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 8/165 (4%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G E + + ++++G GND + G N+ G+D G +G + F Y
Sbjct: 2540 QTVTGGEFSDFLTGGAGNDTLIGLGGNDTLSGLGGNDSLVGGLGSDYLVGGTGNNIFAYE 2599
Query: 311 APSYLYKI-YRFENAIIVYDANEHK-QDFLSDVERLRFADQCIDSVNVKQ---RSILEYT 365
P + ++ + + D ++D L A+ +++ + T
Sbjct: 2600 TPDDGGGTAFNADSTGSITEQIGTGLYDTIADFTGLGEAEGDAIALSSDLIPNTDRILLT 2659
Query: 366 ASYEDLIQVIGQDVFES---MKHFYEFGLSEGRDITFDSYLYLGS 407
+ V+ + + H Y +G + T D L
Sbjct: 2660 VQTDISSNVLDGNNLFAYDDGSHTYIIYDGDGDNTTGDDSQILAR 2704
>gi|163850802|ref|YP_001638845.1| glycosyl transferase group 1 [Methylobacterium extorquens PA1]
gi|163662407|gb|ABY29774.1| glycosyl transferase group 1 [Methylobacterium extorquens PA1]
Length = 1303
Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 80/232 (34%), Gaps = 31/232 (13%)
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP---------------- 437
GR FD Y Y DL + G + RHY+ HG EGR P
Sbjct: 30 GRGGAFDPDFYRRYYPDL-AILGDESKVLKRHYLDHGRAEGRFPNAAALVAALEAEGGAL 88
Query: 438 -DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
F Y A ++DL +H+ FG EGR D + Y+ +
Sbjct: 89 PSDFIPEHYRALYDDLAG-----LTEPWQLSEHYLRFGRFEGRAHGADLSAFEQEYERML 143
Query: 497 NVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLI-NAFADAPDLVQAGKDHF 554
+ G H + R P A+ L + L A P G F
Sbjct: 144 ASGAALNGRRPAESFVHLLVAARVLPGAWLDLFVLHEFALLNEGWLAHPPASRMEGLVAF 203
Query: 555 SNFGYEEGRSIT----FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
G E I+ F+P Y ++ D + G+ + +H++ G+++G
Sbjct: 204 LTEGVERLAPISLRLRFDPHFYRSNNPD--SSVGASDADLYRHWLGKGIQKG 253
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 45/133 (33%), Gaps = 24/133 (18%)
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-------- 566
+ E AF Y + DL D ++ K H+ + G EGR
Sbjct: 26 ISEAGRGGAFDPDFYRRYYPDL-AILGDESKVL---KRHYLDHGRAEGRFPNAAALVAAL 81
Query: 567 ----------FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM 616
F P+ Y YDDL + ++ ++HY+ G EGRA G F+
Sbjct: 82 EAEGGALPSDFIPEHYRALYDDLAGL--TEPWQLSEHYLRFGRFEGRAHGADLSAFEQEY 139
Query: 617 NLSEKSRDKADLS 629
S +
Sbjct: 140 ERMLASGAALNGR 152
>gi|291527344|emb|CBK92930.1| Listeria/Bacterioides repeat [Eubacterium rectale M104/1]
Length = 1081
Score = 92.9 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ YL + D++N +G+ AA +H+I +G+ EGR + F Y ++ DL NAF
Sbjct: 424 FDASYYLNNNPDVKNNWGNTAEAALQHFIKYGMAEGRRGNEIFDVHFYKDNNIDLQNAFG 483
Query: 542 DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
D L H+ G EGR S F+ Y T Y DL + FG D HYI++G+
Sbjct: 484 DNWYLY---YQHYLENGIREGRQASENFDVISYKTRYRDLQSAFGDDYEGYVDHYISYGI 540
Query: 600 KEGRALGI 607
E R
Sbjct: 541 NEERDASP 548
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
D+ YLGS L+ + +D ++ G+K+ F A Y+ ++ D+ N + +
Sbjct: 387 DATNYLGSETALKKLGIADAQGIVNYF---GLKQEDYHLIFDASYYLNNNPDVKNNWGN- 442
Query: 544 PDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
+A HF +G EGR + F+ Y + DL N FG + QHY+ +G++E
Sbjct: 443 --TAEAALQHFIKYGMAEGRRGNEIFDVHFYKDNNIDLQNAFGDNWYLYYQHYLENGIRE 500
Query: 602 GRALGIS 608
GR +
Sbjct: 501 GRQASEN 507
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 529 YIASHEDLINAFADAP----DLVQAGKDHFSNFG-YEEGRSITFNPDLYLTSYDDLWNVF 583
YI++ D N + + + FG +E + F+ YL + D+ N +
Sbjct: 381 YISNQSDATNYLGSETALKKLGIADAQGIVNYFGLKQEDYHLIFDASYYLNNNPDVKNNW 440
Query: 584 GSDRSAAAQHYITHGMKEGRALG-ISGMQFKSVMNLSEKSRDKADLSLSFDH 634
G+ AA QH+I +GM EGR I + F N+ ++ + L + H
Sbjct: 441 GNTAEAALQHFIKYGMAEGRRGNEIFDVHFYKDNNIDLQNAFGDNWYLYYQH 492
>gi|113474282|ref|YP_720343.1| hemolysin-type calcium-binding protein [Trichodesmium erythraeum
IMS101]
gi|110165330|gb|ABG49870.1| Hemolysin-type calcium-binding region [Trichodesmium erythraeum
IMS101]
Length = 709
Score = 92.9 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 58/208 (27%), Gaps = 11/208 (5%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G + D K+ I+ I G N + +++ G +G D + G N
Sbjct: 6 GTNKKDNLKGTAKKDTIN-GKGGNDKIDGRGGNDKLNGGAGKDTLNGGAGKDTLNGGGGN 64
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ ND +G +G DT + +D L+
Sbjct: 65 DQINGGGSNDKLNGGAGKDTLNGSGGNDQI----NGGGSNDKLNGGAGKDTLNG------ 114
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ + + L+ + L G DV G D+ F
Sbjct: 115 GNAQDNLIGGSGNDFLDGGNGNDVLTGNDGNDVLVGNFGKDILTGGAGDDVFFLKQNSAV 174
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEG 434
+ + ++ + + G+ E
Sbjct: 175 NNNSAADMITDFQPNFDTIGLDSGLTEN 202
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 43/119 (36%), Gaps = 7/119 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G + T+ SGG+D ++ N ++ G
Sbjct: 62 GGNDQINGG---GSNDKLNGGAGKDTLNGSGGNDQINGGGSNDKLN----GGAGKDTLNG 114
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ + + + G +GNDV+ GN N+V + G D+ G +G D FF S
Sbjct: 115 GNAQDNLIGGSGNDFLDGGNGNDVLTGNDGNDVLVGNFGKDILTGGAGDDVFFLKQNSA 173
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 54/213 (25%), Gaps = 7/213 (3%)
Query: 330 ANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+K+D L + + L A + L G+D
Sbjct: 5 QGTNKKDNLKGTAKKDTINGKGGNDKIDGRGGNDKLNGGAGKDTLNGGAGKDTLNGGGGN 64
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
+ D N + G+ + G +A L
Sbjct: 65 DQINGGGSNDKLNGGAGKDTLNGSGGNDQINGGGSNDKLNGGAGKDTLNGGNAQDNLIGG 124
Query: 447 ASHEDLINAFADAPDLVQVGKDHFS-NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD-RG 504
+ ++ L + G D NFG + D +L + N +D
Sbjct: 125 SGNDFLDGGNGNDVLTGNDGNDVLVGNFGKDILTGGAGDDVFFLKQNSAVNNNSAADMIT 184
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
++ T G+ G ++ + +I
Sbjct: 185 DFQPNFDTIGLDSG--LTENDLNLQLSGNSTVI 215
Score = 45.5 bits (106), Expect = 0.027, Method: Composition-based stats.
Identities = 25/194 (12%), Positives = 47/194 (24%), Gaps = 14/194 (7%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT---- 398
+ ++ + ++ + + + G D G+D
Sbjct: 3 FYQGTNKKDNLKGTAKKDTINGKGGNDKIDGRGGNDKLNGGAGKDTLNGGAGKDTLNGGG 62
Query: 399 -FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
D GS D L G D G + N + +D +N
Sbjct: 63 GNDQINGGGSNDKLNGGAGKDTLNG------SGGNDQINGGGSNDKLNGGAGKDTLNGGN 116
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY---DDLRNVFGSDRGAAARHYITHG 514
+L+ + F + G D L D L G D ++ +
Sbjct: 117 AQDNLIGGSGNDFLDGGNGNDVLTGNDGNDVLVGNFGKDILTGGAGDDVFFLKQNSAVNN 176
Query: 515 VKEGRNPDAFKALE 528
F+
Sbjct: 177 NSAADMITDFQPNF 190
>gi|86747931|ref|YP_484427.1| glycerophosphoryl diester phosphodiesterase [Rhodopseudomonas
palustris HaA2]
gi|86570959|gb|ABD05516.1| Glycerophosphoryl diester phosphodiesterase [Rhodopseudomonas
palustris HaA2]
Length = 1236
Score = 92.9 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 80/313 (25%), Gaps = 19/313 (6%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y D + G+D L + + + G + +
Sbjct: 907 YAASAAGVDVDLAAGVASGDGNDTLSSIESV-------IGSAHDDRLSGNDAANLLDGGD 959
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G GNDV+ G N++ +G+D DG +G DT + +
Sbjct: 960 GDDILSGGLGNDVLNGGLGNDIITGGAGDDTIDGGAGFDTLDLSEATGAVTLNLVSGT-- 1017
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D S +E F L+ A + + G D +
Sbjct: 1018 -VSGAGIGTDHFSSIESFVFGSGNDVITGGNGDDSLDGGAGNDAIDGGNGNDTLSGGEGN 1076
Query: 387 YEFGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G DI + L GS +D+ D A G
Sbjct: 1077 DAIDGGSGNDIVDGGLGNDTLKGGSGNDVIAAGDGDDNVDAG----SGDDIVTGGAGNDT 1132
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFS-NFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
L+ + + + + G D F G F + + +
Sbjct: 1133 LKGGSGADIITGGAGNDILTGGSGADVFVFAAGFGNDTVTDFATTGSSADLLQFSSDMFA 1192
Query: 502 DRGAAARHYITHG 514
D H G
Sbjct: 1193 DFADVMAHTAQVG 1205
Score = 80.6 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 49/295 (16%), Positives = 81/295 (27%), Gaps = 10/295 (3%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
S N + DV G+G I I G +
Sbjct: 947 SGNDAANLLDGGDGDDILSGGLGNDVLNGGLGNDIITGGAGDDTIDGGAGFD-TLDLSEA 1005
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
++ S +F +S + S T D + G G
Sbjct: 1006 TGAVTLNLVSGTVSGAGIGTDHFSSIESFVFGSGNDVITGGNGDDS-LDGGAGNDAIDGG 1064
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
N I G+D++D GG+ N I + + +
Sbjct: 1065 N----GNDTLSGGEGNDAIDGGSGNDIVD----GGLGNDTLKGGSGNDVIAAGDGDDNVD 1116
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + V G +GND + G S ++ +GND+ G SG D F + A + F
Sbjct: 1117 AGSGDDIVTGGAGNDTLKGGSGADIITGGAGNDILTGGSGADVFVFAAGFGNDTVTDFAT 1176
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
D + D +D + + S V + + D
Sbjct: 1177 TGSSADLLQFSSDMFADFADVMAHTAQVGSSVVVTLDADTSITLANVQMTSLAAD 1231
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 45/329 (13%), Positives = 82/329 (24%), Gaps = 18/329 (5%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY--- 328
G + V A V + G+DV +SG D + V
Sbjct: 861 RGGTATADVTVVVARRVLSGTPGDDVIISTSGDDVIDGGDGVDTVSYAASAAGVDVDLAA 920
Query: 329 -DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
A+ D LS +E + + ++L+ + L +G DV
Sbjct: 921 GVASGDGNDTLSSIESVIGSAHDDRLSGNDAANLLDGGDGDDILSGGLGNDVLNGGLGND 980
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G D + DL G+ ++ + + ++ + +
Sbjct: 981 IITGGAGDDTIDGGAGF--DTLDLSEATGAVTLNLVSGTVSGAGIGTDHFSSIESFVFGS 1038
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
++ + D G D + + G + G
Sbjct: 1039 GNDVITGGNGDDSLDGGAGNDAIDGGNGNDTLSGGEGNDAIDGGSGNDIVDGGLGNDTLK 1098
Query: 508 RHYITHGVKEGRNPDAFKA------LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
+ G D A + A ++ L AG D G
Sbjct: 1099 GGSGNDVIAAGDGDDNVDAGSGDDIVTGGAGNDTLKGGSGADIITGGAGND--ILTGGSG 1156
Query: 562 GRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
F +D F + S+A
Sbjct: 1157 ADVFVFAAGFG----NDTVTDFATTGSSA 1181
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 47/142 (33%), Gaps = 8/142 (5%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G N + + + + + +++ G +GND+++G S ++ +G
Sbjct: 246 SGTAGNDVVYAMQGDDIVWSGAGDDLVYGDGGDDALFGGAGNDILVGGSGTDLLSGDAGR 305
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
DV DG +G D + + + I A D S ++ + I +
Sbjct: 306 DVLDGGAGNDVVL----ASGDTVLFRRGSGIDLVA----LDAASSIDFQDIDSRAITVIR 357
Query: 356 VKQRSILEYTASYEDLIQVIGQ 377
I+ + G
Sbjct: 358 DGADLIVRIGDDALVIRNGAGN 379
>gi|254560782|ref|YP_003067877.1| heme peroxidase with hemolysin-type calcium-binding domain
[Methylobacterium extorquens DM4]
gi|254268060|emb|CAX23932.1| putative heme peroxidase with hemolysin-type calcium-binding domain
[Methylobacterium extorquens DM4]
Length = 3618
Score = 92.9 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 66/193 (34%), Gaps = 8/193 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + G V N + G E + T+ + ++++G +GN+ + G + ++
Sbjct: 1921 DDDIEGDVGNDAIYAGSGDDRVDGGEGDDTLLGNDGADTLIGRTGNNTLDGGNDDDQLSG 1980
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----DANEHKQDFLSDVERLRFA 347
GND G +G DT Y P Y R +V A D L+ +E+++
Sbjct: 1981 GHGNDRLIGGAGTDTAIYSGPIAAYSFERNAQGEVVVSDNLGAEGDGVDTLTTIEQIQMG 2040
Query: 348 DQ----CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + + I+ TA L G D+ + G F
Sbjct: 2041 NDLTPYTLVANGTAAVDIVVGTAGNNTLSGGAGNDLVFAGAGNDNVLWRTGDGRDFVDGG 2100
Query: 404 YLGSYDDLRNVFG 416
+ N G
Sbjct: 2101 AGTDSFRIMNGTG 2113
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 70/291 (24%), Gaps = 24/291 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ TI GDD + + G + + E + +
Sbjct: 3328 GDVLNGTAGADTILGLDGDDNI----LAGGGADVVRAGAGNDFVDAGEGRDVVFAGDGDD 3383
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
V+ G D+V G+ N+ +GND+ +G DT L+ + +
Sbjct: 3384 DVLSGGGADMVYGDGGNDRILAGAGNDLVTAGAGRDTVIGGEGDDLFVAETGDGDDTYWG 3443
Query: 330 ---ANEHKQDFL------SDVER---LRFADQCIDSVNVKQRSILEY------TASYEDL 371
D L +++ A + + R +L + +D+
Sbjct: 3444 DEMGGGLGSDTLDMSAITANIAVNLGTGLAGRGSATSTQSGRDVLWGVENVVTGSGNDDI 3503
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL--GSYDDLRNVFGSDRGAAARHYITH 429
+V + + + D+ G DL + A + +
Sbjct: 3504 TASDAANVMDGGEGNDTYRFGSAAAANGDTIEGFRPGDKIDLSAIDADAGQAGNQAFTLA 3563
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ D + +
Sbjct: 3564 TGAAFTGVGQLLVTQETRDDGDYVVVQGNTAGDASPEFKLAIKGNTAPTAA 3614
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/171 (11%), Positives = 53/171 (30%), Gaps = 9/171 (5%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ GND +I + ++ + +G+D + +G+D I + E
Sbjct: 1349 GTDGNDTIITDFGDDGIWGDAGDDRIEAGAGVDLV---NGGAGDDIITDSGDTGDFLKGE 1405
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D +++ ++ + + + + ++ G D +
Sbjct: 1406 DGNDVIAN------SNGIDILMGGRGKDAIFVGVDATEVFAGEGDDFVIGGDDADLLMGN 1459
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
EG D + + D +F + G + + ++ +
Sbjct: 1460 EGDDWMEGGGGFDTTAGDNSELFFNSAIKGHDVMFAGGDEHDFDGESGDDI 1510
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 26/89 (29%), Gaps = 2/89 (2%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S G N T + G + + G N+ +GND+ +G G DTF
Sbjct: 2266 DSFTGTALNRTFNGTAGDDIANG--ADTALFGIQPNDTMNGGAGNDILNGRGGNDTFIQV 2323
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ ++ +
Sbjct: 2324 STDGRDRVDGGAGTDTYQLNGAAGPETFR 2352
Score = 42.9 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 36/267 (13%), Positives = 61/267 (22%), Gaps = 34/267 (12%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
TFF + +I N N Q S D +++
Sbjct: 1859 TFFTPTGATGVEIRVVANWTSTVAGNTGLQQTASVQSAFVGTAAAEDIAGSSSPNVILGR 1918
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+D+ +G D + EG D + D L G++
Sbjct: 1919 DGDDDIEGDVGNDAIYAGSGDDRVDGGEGDDTLLGNDG----ADTLIGRTGNNTLDG--- 1971
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ L ++ LI + +S +G V D+
Sbjct: 1972 -----------GNDDDQLSGGHGNDRLIGGAGTDTAIYSGPIAAYSFERNAQGEVVVSDN 2020
Query: 486 YLYLGSYDDLRNVF-----GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
G D G+D + A + L
Sbjct: 2021 LGAEGDGVDTLTTIEQIQMGNDLTPYTLVANGTAAV--------DIVVGTAGNNTLSGGA 2072
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITF 567
+ AG D+ + G F
Sbjct: 2073 GNDLVFAGAGNDNVL---WRTGDGRDF 2096
>gi|190895160|ref|YP_001985453.1| putative hemolysin-type calcium binding protein [Rhizobium etli CIAT
652]
gi|190700821|gb|ACE94903.1| putative hemolysin-type calcium binding protein [Rhizobium etli CIAT
652]
Length = 2218
Score = 92.9 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/457 (12%), Positives = 103/457 (22%), Gaps = 55/457 (12%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE + AL +S E + F + N
Sbjct: 1720 DIYIVDNAGDVVTEAASAGTDTIETALASYSLAALANVENLTYTGTAAFTGTGNTLANVI 1779
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
S AD G G T + + V +
Sbjct: 1780 TGGSGNDTLDGGAGADTLIGGTGDDTYIV-------------------DNAGDVVTENAG 1820
Query: 153 YENDSFLTSVMSYF---MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
D+ T++ SY ++ + + + + GA +L
Sbjct: 1821 EGTDTVKTALASYTLAANVENLVYTGTGTSAIFSGTGNALDNIITGGANADTLSGGA--G 1878
Query: 210 EVQQKDSPFIQTIYDSGGDDLL--------DLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ GDD G + I N ++S
Sbjct: 1879 NDMLDGGAGADHLVGGTGDDTYVVDNASDVITENAGEGTDTIRTNLATYSLAALGNVENL 1938
Query: 262 IAQHTVIESVVGSSGN---------DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
T + G++ D + G + + +GND++ D
Sbjct: 1939 TYTGTAAFTGTGNAAANAIIGGAGNDTLDGGTGADTLIGGAGNDIYIVDDAGDVVV---- 1994
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDL 371
+ ++VE L + + + + A+ + L
Sbjct: 1995 ------EVAGGGTDIVKTVLASYTLGANVENLTYTGSSAFAGTGNELDNAITGGAAADTL 2048
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHG 430
G D + G D G G+D + Y
Sbjct: 2049 SGGAGNDTLDGGAGADTLIGGTGDDTYIVDNA--GDIVSENAGEGTDTVKTSLTSYTLGA 2106
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
E A + D + D + G
Sbjct: 2107 NVENLTYTGTAAFTGTGNGLDNVITGGTGADHLAGGL 2143
Score = 90.6 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 76/547 (13%), Positives = 142/547 (25%), Gaps = 48/547 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + + AL ++ ++ E F + N
Sbjct: 1554 DTYVVDNAGDVVTENAGEGNDTVKTALAAYTLGANV--ENLVYTGTAAFAGTGNELANAI 1611
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
AD G G + N + A G
Sbjct: 1612 TGGVGADTLDGGAGADTLSGGAGNDIYVVDNIGDVVVEAAG------------------- 1652
Query: 153 YENDSFLTSVMSYF-MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
D+ T++ SY ++ + +F S AV I G + + +
Sbjct: 1653 AGTDTIKTTLNSYSLASLANVENLTFTGTGDFTGSGNAAVNVITGGAGNDVLDGGAGADT 1712
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ I D+ GD + + I+ S+S T +
Sbjct: 1713 LVGGAGNDIYIVDNAGDVV--TEAASAGTDTIETALASYSLAALANVENLTYTGTAAFTG 1770
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G++ +V+ G S N+ +G D G +G DT+ + E V A
Sbjct: 1771 TGNTLANVITGGSGNDTLDGGAGADTLIGGTGDDTYIVDNAGDVVTENAGEGTDTVKTA- 1829
Query: 332 EHKQDFLSDVERLRFADQCIDSV----NVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
++VE L + ++ +I+ A+ + L G D+ +
Sbjct: 1830 LASYTLAANVENLVYTGTGTSAIFSGTGNALDNIITGGANADTLSGGAGNDMLDGGAGAD 1889
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH------------YITHGVKEGR 435
G D ++ + R A + Y G
Sbjct: 1890 HLVGGTGDDTYVVDNASDVITENAGEGTDTIRTNLATYSLAALGNVENLTYTGTAAFTGT 1949
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS----NFGCEEGRFVTFDSYLYLGS 491
A A+ A ++ L + G D + E D + +
Sbjct: 1950 GNAAANAIIGGAGNDTLDGGTGADTLIGGAGNDIYIVDDAGDVVVEVAGGGTDIVKTVLA 2009
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA---FKALEYIASHEDLINAFADAPDLVQ 548
L + + + G + L A ++ L +
Sbjct: 2010 SYTLGANVENLTYTGSSAFAGTGNELDNAITGGAAADTLSGGAGNDTLDGGAGADTLIGG 2069
Query: 549 AGKDHFS 555
G D +
Sbjct: 2070 TGDDTYI 2076
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/401 (13%), Positives = 112/401 (27%), Gaps = 15/401 (3%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
N ++ F + SG + ++Y+ T + + G N ++
Sbjct: 1454 NALGRTPTTSEASFWTSALGSGTTKADFAVALAVNQSYLSSTTGNGIDVVGTAGNDSLTG 1513
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T +++ G++GND+++ + N+ +G D G +G DT+ + E
Sbjct: 1514 GTGDDTIDGAAGNDLILAFAGNDTIVGGAGADTMIGGTGDDTYVVDNAGDVVTENAGEGN 1573
Query: 325 IIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
V A ++VE L + + + + + L G D
Sbjct: 1574 DTVKTALAA-YTLGANVENLVYTGTAAFAGTGNELANAITGGVGADTLDGGAGADTLSGG 1632
Query: 384 KHFYEFGL-SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH--YITHGVKEGRNPDAF 440
+ + + G + + + N + A + + G G A
Sbjct: 1633 AGNDIYVVDNIGDVVVEAAGAGTDTIKTTLNSYSLASLANVENLTFTGTGDFTGSGNAAV 1692
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFS---------NFGCEEGRFVTFDSYLYLGS 491
+ A ++ L + G D + + Y +
Sbjct: 1693 NVITGGAGNDVLDGGAGADTLVGGAGNDIYIVDNAGDVVTEAASAGTDTIETALASYSLA 1752
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
AA L+ A + LI D +V
Sbjct: 1753 ALANVENLTYTGTAAFTGTGNTLANVITGGSGNDTLDGGAGADTLIGGTGDDTYIVDNAG 1812
Query: 552 DHFSNFGYEEGRSITFNPDLY-LTSYDDLWNVFGSDRSAAA 591
D + E ++ Y L + + G+ SA
Sbjct: 1813 DVVTENAGEGTDTVKTALASYTLAANVENLVYTGTGTSAIF 1853
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 51/399 (12%), Positives = 102/399 (25%), Gaps = 34/399 (8%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ T+ GDD + + E ++ T+ +
Sbjct: 1531 AFAGNDTIVGGAGADTMIGGTGDDTYVVDN--AGDVVTENAGEGNDTVKTALAAYTLGAN 1588
Query: 266 TVIESVVGSSG--------NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
G++ + + G + +G D G +G D + +
Sbjct: 1589 VENLVYTGTAAFAGTGNELANAITGGVGADTLDGGAGADTLSGGAGNDIYVVDNIGDVVV 1648
Query: 318 IYRFENAIIV-YDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVI 375
+ N + L++VE L F +++ A + L
Sbjct: 1649 EAAGAGTDTIKTTLNSYSLASLANVENLTFTGTGDFTGSGNAAVNVITGGAGNDVLDGGA 1708
Query: 376 GQDVFESMKHFYEFGL-SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH--YITHGVK 432
G D + + + G +T + + + + A + Y
Sbjct: 1709 GADTLVGGAGNDIYIVDNAGDVVTEAASAGTDTIETALASYSLAALANVENLTYTGTAAF 1768
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS----------NFGCEEGRFVT 482
G + + ++ L + G D + N G T
Sbjct: 1769 TGTGNTLANVITGGSGNDTLDGGAGADTLIGGTGDDTYIVDNAGDVVTENAGEGTDTVKT 1828
Query: 483 FDSYLYLGSYDDLR-------NVFGSDRGAAARHYITHGVKEGR--NPDAFKALEYIASH 533
+ L + + + S G A + IT G L+ A
Sbjct: 1829 ALASYTLAANVENLVYTGTGTSAIFSGTGNALDNIITGGANADTLSGGAGNDMLDGGAGA 1888
Query: 534 EDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLY 572
+ L+ D +V D + E +I N Y
Sbjct: 1889 DHLVGGTGDDTYVVDNASDVITENAGEGTDTIRTNLATY 1927
Score = 70.6 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 48/360 (13%), Positives = 96/360 (26%), Gaps = 29/360 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL-TFEETSIHSDIKFISSNNGY--- 88
D +TE + + AL ++ ++ T + F + N
Sbjct: 1804 DTYIVDNAGDVVTENAGEGTDTVKTALASYTLAANVENLVYTGTGTSAIFSGTGNALDNI 1863
Query: 89 ------VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
T + M AD G G T + NA I G
Sbjct: 1864 ITGGANADTLSGGAGNDMLDGGAGADHLVGGTGDDTYVVDNASDVITENAGEGTDTIRTN 1923
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+ T ++ ++ +A G + + G
Sbjct: 1924 LATYSLAALGNVENLTYTGTAAFTGTGNAAANAIIGGAGNDTLDGGTGADTLIGG----A 1979
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK--NM 260
GN+IY ++ ++ L N +L S+ G +
Sbjct: 1980 GNDIYIVDD--AGDVVVEVAGGGTDIVKTVLASYTLGANVENLTYTGSSAFAGTGNELDN 2037
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I +++ G +GND + G + + +G+D + + D A +
Sbjct: 2038 AITGGAAADTLSGGAGNDTLDGGAGADTLIGGTGDDTYIVDNAGDIVSENAGEGTDTVKT 2097
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ ++VE L + +++ + L +G D
Sbjct: 2098 ----------SLTSYTLGANVENLTYTGTAAFTGTGNGLDNVITGGTGADHLAGGLGNDT 2147
Score = 70.2 bits (170), Expect = 9e-10, Method: Composition-based stats.
Identities = 45/298 (15%), Positives = 76/298 (25%), Gaps = 24/298 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D S ITE + R L +S E + F + N
Sbjct: 1898 DTYVVDNASDVITENAGEGTDTIRTNLATYSLAALGNVENLTYTGTAAFTGTGNAAANAI 1957
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ AD G G + + V
Sbjct: 1958 IGGAGNDTLDGGTGADTLIGGAGNDIYIV-------------------DDAGDVVVEVAG 1998
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D T + SY + + G A + + GA +L
Sbjct: 1999 GGTDIVKTVLASYTLGANVENLTYTGSSAFAGTGNELDNAITGGAAADTLSGGA--GNDT 2056
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
T+ GDD + G + + + E ++ + T+ + +
Sbjct: 2057 LDGGAGADTLIGGTGDDTYIVDNAGDIVS--ENAGEGTDTVKTSLTSYTLGANVENLTYT 2114
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G++ GN +NV +G D G G DT+ + E V +
Sbjct: 2115 GTA-AFTGTGNGLDNVITGGTGADHLAGGLGNDTYIVDNAGDIVTENVGEGTDTVRTS 2171
>gi|308389520|gb|ADO31840.1| iron-regulated protein FrpC [Neisseria meningitidis alpha710]
Length = 1629
Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 67/458 (14%), Positives = 129/458 (28%), Gaps = 70/458 (15%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 865 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGR 924
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYEN-----DSFLTSVMSYFMPQDSMMDASFGYCATPM- 184
+ + + ++ DS +V SYF S
Sbjct: 925 KDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 984
Query: 185 VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
V D+ V+K+ + + G++ Y+ +Y + GDDLL+ G N
Sbjct: 985 VLDVATVKKL--VQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGN 1038
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ ++ G E N + + + + G GND + G N+ +GND +G
Sbjct: 1039 DSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGG 1098
Query: 302 SGLDTFFYYAPSYLYKIYRFE-------------------------------------NA 324
SG DT+ + +Y ++
Sbjct: 1099 SGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQ 1158
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVI 375
+ V ++ ++ + F + + V + L S L +
Sbjct: 1159 VTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGL 1218
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D G D +Y G+ +D + + Y +G
Sbjct: 1219 GDDYLYGADGNDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDVLN 1269
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ L ++ LI + G D +
Sbjct: 1270 GGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 1307
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 60/486 (12%), Positives = 118/486 (24%), Gaps = 67/486 (13%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D+ + + D G G + +N + G H +G + G +
Sbjct: 1033 NGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGN 1092
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ S +Y + D + Y DI+ + + G +
Sbjct: 1093 DYLEGGSGSD-TYVFGKGFGQDTVYNYDYATGRKDII---------RFTDGITADMLTFT 1142
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
++ + + D G + + + + ++ + N + ++ +V
Sbjct: 1143 REGNHLLIKAKDGSGQVTV-------QSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLV 1195
Query: 273 --GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+D + + + G+D G+ G D + IY +
Sbjct: 1196 QQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGND--LLNGDAGNDSIYSGNGNDTL--- 1250
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE-- 388
D + L + + L + LI G D E
Sbjct: 1251 -----DGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV 1305
Query: 389 FGLSEGRDITFDSYLYLGS---------------------YDDLRNVFGSDRGAAARHYI 427
FG G+D ++ G L + Y
Sbjct: 1306 FGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYF 1365
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ D + + + G D YL
Sbjct: 1366 QNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGSTLNGGLG--DDYL 1423
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
Y DDL N G + + L ++ L +
Sbjct: 1424 YGADGDDLLN-------------GDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNG 1470
Query: 548 QAGKDH 553
G DH
Sbjct: 1471 GEGNDH 1476
Score = 77.1 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 84/274 (30%), Gaps = 33/274 (12%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH--EIGHAL 132
+ D D G G + + G
Sbjct: 1251 DGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGF 1310
Query: 133 GLMHPGSYNGGYP-------VYGVDND--------------YENDSFLTSVMSYFMPQDS 171
G +Y+ G+ D ++DS +V SYF S
Sbjct: 1311 GQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGS 1370
Query: 172 MMDASFGYCATPM-VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGG 227
V D+ V+++ + + G++ Y+ +Y + G
Sbjct: 1371 GAYRIDEIHFDNGKVLDVATVKEL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADG 1428
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
DDLL+ G N + ++ G E N + + +++ G GND + G N+
Sbjct: 1429 DDLLN----GDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGND 1484
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+GND +G SG DT+ + +Y +
Sbjct: 1485 TLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNY 1518
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 63/427 (14%), Positives = 111/427 (25%), Gaps = 93/427 (21%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS-----HNALHEIGHAL 132
+ + + + I D G G T + + ++ +A
Sbjct: 1063 NGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYAT 1122
Query: 133 GLMHPGSYNGGYPVYGVDNDYEND---------SFLTSVMSYFMPQDSMMDASFGYCATP 183
G + G + E + S +V SYF S
Sbjct: 1123 GRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDN 1182
Query: 184 M-VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
V D+ V+K+ + + G++ Y+ +Y + G+DLL+ G
Sbjct: 1183 GKVLDVATVKKL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLN----GDA 1236
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
N + ++ G E N + + + + G GND + G N+ +GND +
Sbjct: 1237 GNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLE 1296
Query: 300 GSSGLD-------------------------------------TFFYYAPSYLYKIYRFE 322
G SG D TF L K
Sbjct: 1297 GGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDDS 1356
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSV---------------------------N 355
+ V ++ ++ + F + + V
Sbjct: 1357 GQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGSTLNG 1416
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
L + L G D S EG D LY + +D N
Sbjct: 1417 GLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGND-----ALYGYNGNDALNGG 1471
Query: 416 GSDRGAA 422
+
Sbjct: 1472 EGNDHLN 1478
>gi|147883920|gb|ABQ52218.1| bifunctional hemolysin-adenylate cyclase precursor [Bordetella
pertussis]
Length = 1225
Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 60/483 (12%), Positives = 123/483 (25%), Gaps = 45/483 (9%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D+ + G TI + LGL +G D
Sbjct: 657 GSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 716
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + +LG + Y
Sbjct: 717 SDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYY------ 770
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ ++ + + D+L G + + ++ G + + + + + G
Sbjct: 771 DNVRNVENVIGTSMKDVLI----GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYG 826
Query: 274 SSGNDVVIGNSANNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GND + G ++ +GND V G G+DT Y I
Sbjct: 827 DAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGR 886
Query: 323 NAIIVY------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + +A D +S +E + + Q ++L +
Sbjct: 887 IGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 946
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L G DV + GRD + + D N + + G
Sbjct: 947 LAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANA---------GNLLDGG 997
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+ A + + + + + + E + + +
Sbjct: 998 DGRDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLI- 1056
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
D + G + L A ++DL D L G
Sbjct: 1057 --GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGVG 1114
Query: 551 KDH 553
H
Sbjct: 1115 YGH 1117
Score = 82.1 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/371 (13%), Positives = 99/371 (26%), Gaps = 32/371 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ T D D+ G G + + LG +
Sbjct: 790 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLG------DDTLE 843
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
G D + + V+ D++ Y T + I A + G
Sbjct: 844 GGAGNDWFGQTQAREHDVLRGGDGVDTVD-----YSQTGAHAGIAAGRIGLGILADLGAG 898
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ K+ + + ++ L + G + + + G E + +
Sbjct: 899 RVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVLLG 958
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------YLY 316
+ + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 959 GDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFSGPGRGLDAGAKG 1018
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ L ++E + + + ++L A + L G
Sbjct: 1019 VFLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAG 1078
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
DV + G D DL G D Y + E
Sbjct: 1079 DDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGVGYGHDTIYESGG 1125
Query: 437 PDAFKALEYIA 447
+ A
Sbjct: 1126 GHDTIRINAGA 1136
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 56/417 (13%), Positives = 97/417 (23%), Gaps = 64/417 (15%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N +I + + G SG+D + G + N+ G + G +G D F
Sbjct: 532 IIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLG 591
Query: 313 SYLYKIYRFENAIIVYDA--------------------------------NEHKQDFLSD 340
+ ++ V N D + +
Sbjct: 592 VWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKN 651
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+E L + Q + L + + G D+ +G DI
Sbjct: 652 IENLHGSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQ 711
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
DD+ G D + + + +A
Sbjct: 712 DDE--TVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDY 769
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
++ ++ + +G D G G
Sbjct: 770 YDNVRNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGD------------GDDLLFG 817
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLW 580
D L A ++ L D AG D F E +
Sbjct: 818 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLR-------------- 863
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKV 637
G D Y G G A G G+ + + + S ++D
Sbjct: 864 ---GGDGVD-TVDYSQTGAHAGIAAGRIGLGILADLGAGRVDKLGEAGSSAYDTVSG 916
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/365 (11%), Positives = 73/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N IA + G GND + G +++ G D G G D F
Sbjct: 654 NLHGSRLNDRIAGDDQDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 713
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 714 ETVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYYDNV 773
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+VE + Q + + + L G D+
Sbjct: 774 RNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 833
Query: 390 GLSEGRDITFDSYL------YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 834 YGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGRIGLGILA 893
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 894 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 951
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 952 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRD 1001
Query: 564 SITFN 568
++ F+
Sbjct: 1002 TVDFS 1006
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/333 (13%), Positives = 81/333 (24%), Gaps = 47/333 (14%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA--- 131
+ + +F + + DV R G G T+ G A
Sbjct: 827 DAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGR 886
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+GL G + ++ + + + + + V
Sbjct: 887 IGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 946
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
LG + + Q +Y GDD N +D +
Sbjct: 947 LAGGEGDDVLLGGD---GDDQLSGDAGRDRLYGEAGDDWF-FQDAANAGNLLDGGDGRDT 1002
Query: 252 SIGGYEKNMTIAQHTV------------------------IESVVGSSGNDVVIGNSANN 287
A IE+ VGS+ +DV+IG++ N
Sbjct: 1003 VDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRNIENAVGSARDDVLIGDAGAN 1062
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
V +GNDV G +G D + ++
Sbjct: 1063 VLNGLAGNDVLSGGAGDD--VLLGDEGSDLLSGDAGNDDLFGGQGDDTYLF--------- 1111
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
V +I E ++ + G D
Sbjct: 1112 -----GVGYGHDTIYESGGGHDTIRINAGADQL 1139
Score = 39.8 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 47/177 (26%), Gaps = 29/177 (16%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVF-DGSSGL-DTFFYYAPSYLYKIYRFENAIIV 327
V+G G+DVV+ N++ + +G + + G D+ A + + + N V
Sbjct: 429 DVIGGDGDDVVLANASRIHYDGGAGTNTVSYAALGRQDSITVSADGERFNVRKQLNNANV 488
Query: 328 Y---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y + D L V+ + +
Sbjct: 489 YREGVATQTTAYGKRTENVQYRHVELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDN 548
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L + + L G D + G D+ + D +
Sbjct: 549 FLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLGVWSNQLDGGAGVDT 605
>gi|17544968|ref|NP_518370.1| calcium binding hemolysin protein [Ralstonia solanacearum GMI1000]
gi|17427258|emb|CAD13777.1| putative calcium binding hemolysin protein [Ralstonia solanacearum
GMI1000]
Length = 1499
Score = 92.2 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 65/445 (14%), Positives = 117/445 (26%), Gaps = 50/445 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
T + + + +D + + G G +N G + +
Sbjct: 865 GGSGNDNLYGGAGNDTLEGGAGNDYLVGNEGSDTYVFNSGWGQDTIYNYDTSTGRSDVIA 924
Query: 136 HPGSYNGGYPVYGVDNDYE-----NDSFLTSVMSYFMPQDSMMDASFGYCATPMV-SDIV 189
V D N S +V S+F + D+
Sbjct: 925 FGDGIAASDIVATRSGDDLILSLRNSSDRVTVQSHFNSDATGPYRIEQVRFADGTSWDVA 984
Query: 190 AVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
AV+ + AP +N+Y + T+ GG+D L G
Sbjct: 985 AVKALVQAPTSGA-DNLYGYASDDTLNGLDGNDTLRGYGGNDTL----RGDAGADTLYGG 1039
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ SI G N + + ++G SGND + G + N+ +GND G+ G DT+
Sbjct: 1040 DGNDSIDGGADNDYLYGEAGDDRLLGGSGNDTLYGGNGNDTLEGDAGNDYLVGNEGSDTY 1099
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--------------------------- 340
+ + +Y ++ + D E +
Sbjct: 1100 VFNSGWGQDTLYNYDTSSGRSDVIEFGTGIAASDIVATRSGDDLILSLRNSSDKVTVQSY 1159
Query: 341 ----------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
++ +RFAD V + + T+ ++L D +
Sbjct: 1160 FYSDATGPYRIDEVRFADGTSWDVAAVKTLVQAPTSGADNLYGYASDDTLNGLDGNDTLR 1219
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G D Y N Y G L ++
Sbjct: 1220 GYGGNDTLRGDAGADTLYGGDGNDSIDGGADNDYLYGEAGDDHLLGGSGNDTLYGGNGND 1279
Query: 451 DLINAFADAPDLVQVGKDHFSNFGC 475
L + + G D +
Sbjct: 1280 TLEGGAGNDYLVGNEGSDTYVFNSG 1304
Score = 88.7 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 83/589 (14%), Positives = 148/589 (25%), Gaps = 105/589 (17%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ T + + + +D + + G G +N G + +
Sbjct: 665 GKEGNDNLYGGAGNDTLEGGAGNDYLVGNEGSDTYVFNSGWGQDTIYNYDTTAGRSDVIE 724
Query: 136 HPGSYNGGYPVYGVDNDYE-----NDSFLTSVMSYFMPQDSMMDASFGYCATPMV-SDIV 189
+ D N + +V SYF + D+
Sbjct: 725 FGSGIAATDVIATRSGDDLILSLRNGTDKVTVQSYFNSDATGPYRIDQVRFADGTSWDVA 784
Query: 190 AVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
AV+ + AP +N+Y + T+ GG+D L G
Sbjct: 785 AVKTLVQAPTSGT-DNLYGYASDDTLNGLDGNDTLRGYGGNDTL----RGDAGADNLFGG 839
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + G + N + +S++G SGND + G + N+ +GND G+ G DT+
Sbjct: 840 DGNDMLDGGDDNDYLYGEAGDDSLLGGSGNDNLYGGAGNDTLEGGAGNDYLVGNEGSDTY 899
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--------------------------- 340
+ + IY ++ + D +
Sbjct: 900 VFNSGWGQDTIYNYDTSTGRSDVIAFGDGIAASDIVATRSGDDLILSLRNSSDRVTVQSH 959
Query: 341 ----------VERLRFADQC------------------IDSVNVKQRSILEYTASYEDLI 372
+E++RFAD + L + L
Sbjct: 960 FNSDATGPYRIEQVRFADGTSWDVAAVKALVQAPTSGADNLYGYASDDTLNGLDGNDTLR 1019
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDIT-----------------------FDSYLYLGSYD 409
G D +G D D+ D
Sbjct: 1020 GYGGNDTLRGDAGADTLYGGDGNDSIDGGADNDYLYGEAGDDRLLGGSGNDTLYGGNGND 1079
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI---NAFADAPDLVQVG 466
L G+D T+ G D + + D+I A + +
Sbjct: 1080 TLEGDAGNDYLVGNEGSDTYVFNSGWGQDTLYNYDTSSGRSDVIEFGTGIAASDIVATRS 1139
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYD---------DLRNVFGSDRGAAARHYITHGVKE 517
D VT SY Y + + T G
Sbjct: 1140 GDDLILSLRNSSDKVTVQSYFYSDATGPYRIDEVRFADGTSWDVAAVKTLVQAPTSGADN 1199
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ L + ++ L + AG D + +G + SI
Sbjct: 1200 LYGYASDDTLNGLDGNDTLRGYGGNDTLRGDAGAD--TLYGGDGNDSID 1246
Score = 86.8 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 61/420 (14%), Positives = 107/420 (25%), Gaps = 68/420 (16%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
T D+ + + +D + + G G +N G + +
Sbjct: 1065 GGSGNDTLYGGNGNDTLEGDAGNDYLVGNEGSDTYVFNSGWGQDTLYNYDTSSGRSDVIE 1124
Query: 136 HPGSYNGGYPVYGVDNDYE-----NDSFLTSVMSYFMPQDSMMDASFGYCATPMV-SDIV 189
V D N S +V SYF + D+
Sbjct: 1125 FGTGIAASDIVATRSGDDLILSLRNSSDKVTVQSYFYSDATGPYRIDEVRFADGTSWDVA 1184
Query: 190 AVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
AV+ + AP +N+Y + T+ GG+D L G
Sbjct: 1185 AVKTLVQAPTSGA-DNLYGYASDDTLNGLDGNDTLRGYGGNDTL----RGDAGADTLYGG 1239
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ SI G N + + ++G SGND + G + N+ +GND G+ G DT+
Sbjct: 1240 DGNDSIDGGADNDYLYGEAGDDHLLGGSGNDTLYGGNGNDTLEGGAGNDYLVGNEGSDTY 1299
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--------------------------- 340
+ + IY ++ + D +
Sbjct: 1300 VFNSGWGQDTIYNYDTSSGRSDVIAFGDGIAASDIIATRSGDDLILSLRNSSDRVTVQSY 1359
Query: 341 ----------VERLRFADQC------------------IDSVNVKQRSILEYTASYEDLI 372
+ +RFAD + L + +
Sbjct: 1360 FYSDATGPYRTDLVRFADGTSWDVAAVKALVLVPTSGADNLYGYASDDALNGLDGNDTIR 1419
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D +G D+ Y + + Y +G
Sbjct: 1420 GYGGNDTLRGDAGADNLFGGDGNDVLDGGADNDYLYGEAGDDSLQGGAGTDTLYGGNGND 1479
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 68/509 (13%), Positives = 124/509 (24%), Gaps = 49/509 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + S D G G ++ + G
Sbjct: 846 DGGDDNDYLYGEAGDDSLLGGSGNDNLYGGAGNDTLEGGAGNDYLVGNEGSDTYVFNSGW 905
Query: 135 MHPGSYNGGYPVYGVDNDYEND-----------SFLTSVMSYFMPQDSMMDASFGYCATP 183
YN D D S ++S D + S
Sbjct: 906 GQDTIYNYDTSTGRSDVIAFGDGIAASDIVATRSGDDLILSLRNSSDRVTVQSHFNSDAT 965
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
I V+ + + + + D+ D TL G N
Sbjct: 966 GPYRIEQVRF--------ADGTSWDVAAVKALVQAPTSGADNLYGYASDDTLNGLDGNDT 1017
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ G T+ +S+ G + ND + G + ++ SGND G +G
Sbjct: 1018 LRGYGGNDTLRGDAGADTLYGGDGNDSIDGGADNDYLYGEAGDDRLLGGSGNDTLYGGNG 1077
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT + + E + + QD L + + I+ S +
Sbjct: 1078 NDTL--EGDAGNDYLVGNEGSDTYVFNSGWGQDTLYNYDTSSGRSDVIEFGTGIAASDIV 1135
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
T S +DLI + + Y + + G + G+ D+ V
Sbjct: 1136 ATRSGDDLILSLRNSSDKVTVQSYFYSDATGPYRIDEVRFADGTSWDVAAV------KTL 1189
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
T G + L + ++ L + G D +
Sbjct: 1190 VQAPTSGADNLYGYASDDTLNGLDGNDTLRGYGGNDTLRGDAGADTLYGGDGNDSIDGGA 1249
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
D+ Y G L ++ L +
Sbjct: 1250 DNDYL---------------------YGEAGDDHLLGGSGNDTLYGGNGNDTLEGGAGND 1288
Query: 544 PDLVQAGKDHFS-NFGYEEGRSITFNPDL 571
+ G D + N G+ + ++
Sbjct: 1289 YLVGNEGSDTYVFNSGWGQDTIYNYDTSS 1317
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 75/505 (14%), Positives = 135/505 (26%), Gaps = 51/505 (10%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D G T R D+ D D G + + G
Sbjct: 1013 DGNDTLRGYGGNDTLRGDAGADTLYGGDGNDSIDGGADNDYLYGEAGDDRLLGGSGNDTL 1072
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
N G D + +Y D + Y + SD++ A
Sbjct: 1073 YGGN-GNDTLEGDAGNDYLVGNEGSDTYVFNSGWGQDTLYNYDTSSGRSDVIEFGTGIAA 1131
Query: 198 PK---GSLGNNIYKIEVQQKDSPFIQTIY--DSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G+++ D +Q+ + D+ G +D S
Sbjct: 1132 SDIVATRSGDDLILSLRNSSDKVTVQSYFYSDATGPYRIDEVRFADGT----------SW 1181
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
K + A + +++ G + +D + G N+ GND G +G DT +
Sbjct: 1182 DVAAVKTLVQAPTSGADNLYGYASDDTLNGLDGNDTLRGYGGNDTLRGDAGADTLY--GG 1239
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
I + +Y L LE A + L+
Sbjct: 1240 DGNDSIDGGADNDYLYGEAGDDH--------LLGGSGNDTLYGGNGNDTLEGGAGNDYLV 1291
Query: 373 QVIGQDVFESMKHF-----YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
G D + + Y + S GR + + D + G D + R+
Sbjct: 1292 GNEGSDTYVFNSGWGQDTIYNYDTSSGRSDVIAFGDGIAASDIIATRSGDDLILSLRNSS 1351
Query: 428 ------THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
++ + P + + + A + G D+ + +
Sbjct: 1352 DRVTVQSYFYSDATGPYRTDLVRFADGTSWDVAAVKALVLVPTSGADNLYGYASD----- 1406
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
D+ L D +R G+D G D L+ A ++ L
Sbjct: 1407 --DALNGLDGNDTIRGYGGNDTLR-----GDAGADNLFGGDGNDVLDGGADNDYLYGEAG 1459
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT 566
D AG D + +G ++
Sbjct: 1460 DDSLQGGAGTD--TLYGGNGNDTLE 1482
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 77/300 (25%), Gaps = 31/300 (10%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D G T R D+ D D G + + G
Sbjct: 1213 DGNDTLRGYGGNDTLRGDAGADTLYGGDGNDSIDGGADNDYLYGEAGDDHLLGGSGNDTL 1272
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
NG + G + S +Y D + Y + SD++A A
Sbjct: 1273 YGGNGNDTLEGGAGNDYLVGNEGSD-TYVFNSGWGQDTIYNYDTSSGRSDVIAFGDGIAA 1331
Query: 198 PK---GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G+++ D +Q+ + S L+ S
Sbjct: 1332 SDIIATRSGDDLILSLRNSSDRVTVQSYFYSDATGPYRTDLVRFAD--------GTSWDV 1383
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
K + + + +++ G + +D + G N+ GND G +G D
Sbjct: 1384 AAVKALVLVPTSGADNLYGYASDDALNGLDGNDTIRGYGGNDTLRGDAGAD--------- 1434
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
++ + ++ ++ L L + L V
Sbjct: 1435 --NLFGGDGNDVLDGGADNDY--------LYGEAGDDSLQGGAGTDTLYGGNGNDTLEGV 1484
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 69/233 (29%), Gaps = 22/233 (9%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
T + + + +D + + G G +N G + +
Sbjct: 1265 GGSGNDTLYGGNGNDTLEGGAGNDYLVGNEGSDTYVFNSGWGQDTIYNYDTSSGRSDVIA 1324
Query: 136 HPGSYNGGYPVYGVDNDYE-----NDSFLTSVMSYFMPQDSMMDASFGYCATPMV-SDIV 189
+ D N S +V SYF + + D+
Sbjct: 1325 FGDGIAASDIIATRSGDDLILSLRNSSDRVTVQSYFYSDATGPYRTDLVRFADGTSWDVA 1384
Query: 190 AVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
AV+ + P +N+Y + TI GG+D L
Sbjct: 1385 AVKALVLVPTSGA-DNLYGYASDDALNGLDGNDTIRGYGGNDTLR-------------GD 1430
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
++ G + N + + + G +G+D + G + + + +GND +G
Sbjct: 1431 AGADNLFGGDGNDVLDGGADNDYLYGEAGDDSLQGGAGTDTLYGGNGNDTLEG 1483
>gi|149914007|ref|ZP_01902539.1| RTX toxins and related Ca2+-binding protein [Roseobacter sp.
AzwK-3b]
gi|149812291|gb|EDM72122.1| RTX toxins and related Ca2+-binding protein [Roseobacter sp.
AzwK-3b]
Length = 1274
Score = 92.2 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 66/426 (15%), Positives = 104/426 (24%), Gaps = 23/426 (5%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY-- 195
G Y +P + + + T + +I AV Y
Sbjct: 63 GDYRVVFPTTAESQRLATANVGDAAADSDPDPTTGTTPVLTLTDTQDLFEIDAVYGNYIV 122
Query: 196 -GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
GA G Y + TI+ +GGDD +D +
Sbjct: 123 DGAETGESMPLGYSDAQGDLITDNADTIFGNGGDDTIDA-------------AGGDDFVS 169
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N +A T +++ G GND + GN+ N+ F SG D G G D
Sbjct: 170 GGTGNDVVAGGTGNDNLNGDDGNDSLSGNAGNDQLFGGSGFDALSGGDGNDLLA-GGGDN 228
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
N + ++ + + L + L A + +
Sbjct: 229 DTLFGDAGNDDLRGESGDDFLSGGIGDDFLEGGTGNDNVNGDDGNDDLRGDAGDDQMFGG 288
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D D+ F + + F S G
Sbjct: 289 AGIDTLFGGDGNDLLAGGFDNDVLFGDAGNDDLRGEDGDDFLSGGIGDDFLDGGTGNDNV 348
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
D L A + L G D S + + G D
Sbjct: 349 NGDDGNDDLRGDAGDDQLFGGAGIDTLFGGDGNDQLSGGFDNDVLLGDAGNDDLRGEDGD 408
Query: 495 LRNVFGSDRGAAARHYITH------GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
G+ A G + R + ++ L +
Sbjct: 409 DFISGGTGDDFAEGGAGNDTINGDEGNDDLRGGAGNDQIFGGDGNDTLAGGEGADSLVGG 468
Query: 549 AGKDHF 554
AG D F
Sbjct: 469 AGADSF 474
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 67/492 (13%), Positives = 120/492 (24%), Gaps = 35/492 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + G T D+ D GIG + + G
Sbjct: 214 SGGDGNDLLAGGGDNDTLFGDAGNDDLRGESGDDFLSGGIGDDFLEGGTGNDNVNGDDGN 273
Query: 135 MH---------PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
G ++G D + + + + + + G
Sbjct: 274 DDLRGDAGDDQMFGGAGIDTLFGGDGNDLLAGGFDNDVLFGDAGNDDLRGEDGDDFLSGG 333
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVK 240
+ G + + + ++ G D L + L GG
Sbjct: 334 IGDDFLDGGTGNDNVNGDD----GNDDLRGDAGDDQLFGGAGIDTLFGGDGNDQLSGGFD 389
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N + L + G + + I+ T + G +GND + G+ N+ +GND G
Sbjct: 390 NDVLLGDAGNDDLRGEDGDDFISGGTGDDFAEGGAGNDTINGDEGNDDLRGGAGNDQIFG 449
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
G DT + A + D + + D + + +
Sbjct: 450 GDGNDTL--AGGEGADSLVGGAGADSFALGADD-TASGGDGDDIFLVDPSLPTGGNATIT 506
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
E + D + + G + + D TF+ +
Sbjct: 507 GGETGETAGDTLDLRGLGPVDV--------VYNSSDPTFNPVTGISESGTATYTNTGGDP 558
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
V + + I+A D V G D +
Sbjct: 559 VTIAFSEIETVLTDADGTVDGTSSADTINVGFIDAQGD---RVTEGADTIVTVDGNDSVA 615
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
D G+ G R D L A ++DL+
Sbjct: 616 AGGGDDSVDAGTGDDFVEGGAGNDTLI---GGDGNDALRGDDGNDVLSGDAGNDDLLGGA 672
Query: 541 ADAPDLVQAGKD 552
D AG D
Sbjct: 673 GDDQMFGGAGDD 684
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/411 (13%), Positives = 107/411 (26%), Gaps = 14/411 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + D+ + D G G + + + G
Sbjct: 643 GGDGNDALRGDDGNDVLSGDAGNDDLLGGAGDDQMFGGAGDDFMGGQDGNDTLDGGDGAD 702
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+G V G + + A + T + A ++
Sbjct: 703 FVAGDDGNDLVQGGAGSDTLVGGAGADTLVGGLGNDFFTADNNFVTTDDPTADAAGDVVF 762
Query: 196 GAPKGSLGNNIYKI----------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-ID 244
G +G+ + + E D ++ + + L I + +D
Sbjct: 763 GGAEGTTDLDTLDLRGADVVQIQKEDDPNDPGAVRGVVTFSTGETLTFEGIELILTDAVD 822
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
G+ A ++++G+ G+D + N+V +GND D +G
Sbjct: 823 GTEAGQFMPVGFADAEGDAITEGADTILGNGGDDDIRAGGGNDVVDGGAGNDFVDAGAGD 882
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT + + + + + D + + + D D + +L+
Sbjct: 883 DTV--TGGTGNDDLRGGDGNDSLEGGLGDDFLDGDTGDDLVFGGDGNDDMRGSEGNDLLQ 940
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
A + L+ + D + G D S S D ++F D+
Sbjct: 941 GGAGNDTLLGEMDNDTLDGGAGADLLEGDIGNDSLIVSANDTASGGDGDDIFTIDQSITD 1000
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
A L I D P +F G
Sbjct: 1001 GPGTITITGGEGGETAGDTLVLTGLGPVDITYTGDDPASESGTATYFDANG 1051
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 61/461 (13%), Positives = 115/461 (24%), Gaps = 31/461 (6%)
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
P ++ + + G TI + A G + S V +D
Sbjct: 535 PTFNPVTGISESGTATYTNTGG-DPVTIAFSEIETVLTDADGTVDGTSSADTINVGFIDA 593
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
+ + + DS+ D +G +
Sbjct: 594 QGDRVTEGADTIVTVDGNDSVAAGGGDDSVDAGTGDDFVEGGA--GNDTLIGGD---GND 648
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ + G+D L+GG + +GG + N T+ + V
Sbjct: 649 ALRGDDGNDVLSGDAGND----DLLGGAGDDQMFGGAGDDFMGGQDGNDTLDGGDGADFV 704
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G GND+V G + ++ +G D G G D F + A V
Sbjct: 705 AGDDGNDLVQGGAGSDTLVGGAGADTLVGGLGNDFFTADNNFVTTDDPTADAAGDVVFGG 764
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
L ++ K+ + A + G+ +
Sbjct: 765 AEGTTDLDTLDL----RGADVVQIQKEDDPNDPGAVRGVVTFSTGETLTFEGIELILTDA 820
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+G + + + G+D G + R ++ A ++
Sbjct: 821 VDGTEAGQFMPVGFADAEGDAITEGADTIL-----GNGGDDDIRAGGGNDVVDGGAGNDF 875
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
+ D G D + G D G
Sbjct: 876 VDAGAGDDTVTGGTGNDDLRGGDGNDSLEGGLGDDFLDGDTGDDLVFGGD---------- 925
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G + R + L+ A ++ L+ + AG D
Sbjct: 926 --GNDDMRGSEGNDLLQGGAGNDTLLGEMDNDTLDGGAGAD 964
>gi|296448690|ref|ZP_06890552.1| Hemolysin-type calcium-binding region [Methylosinus trichosporium
OB3b]
gi|296253797|gb|EFH00962.1| Hemolysin-type calcium-binding region [Methylosinus trichosporium
OB3b]
Length = 496
Score = 92.2 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 58/394 (14%), Positives = 105/394 (26%), Gaps = 34/394 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D NG + + I AD G G T
Sbjct: 70 FGGDGNDTLIGNGAGNLLKGGRGNDLLIGGAGADTLDGGAGVDT---------------- 113
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
Y V + ++ +T ++ + + G + + D A
Sbjct: 114 ---ADYGDKTSAVAVTLNGAINATVTVGGVAEDTIRNIENVTGGAASDTLTGDDAANLLS 170
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G K + + G D +D + S
Sbjct: 171 GG-----------NGNDLLKGAGGADILDGGAGSDTVDYRDKTAAVAVTLNGATNASVKV 219
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G TI IE++ G SG D +IG+ ++N+ +G DV DG +G+DT Y +
Sbjct: 220 GGVAEDTIRN---IENIYGGSGADTLIGDGSSNLLRGGAGADVLDGGAGVDTADYRDKTA 276
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ +D + ++E + + ++L A + L
Sbjct: 277 SVAVTLNGATNASVKVGGVAEDTIRNIENIYGGSGADTLIGDGSSNLLRGGAGADVLDGG 336
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D + ++ + D +RN+ GA A +
Sbjct: 337 AGVDTADYSDKTSSVAVTLNGATNATVMVGGVVEDTVRNIENVTGGAGADTLVGDSSANL 396
Query: 435 RNPDAFKALEYIASHED-LINAFADAPDLVQVGK 467
+ + A D L +
Sbjct: 397 LSGGGGDDVLTGAGGADRLTGGSGSDTFVFAPAF 430
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 38/274 (13%), Positives = 73/274 (26%), Gaps = 55/274 (20%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV--------------------------- 267
GG N + + + + G N +
Sbjct: 69 GFGGDGNDTLIGNGAGNLLKGGRGNDLLIGGAGADTLDGGAGVDTADYGDKTSAVAVTLN 128
Query: 268 -------------------IESVVGSSGNDVVIGNSANNVFFESSGN---------DVFD 299
IE+V G + +D + G+ A N+ +GN D+ D
Sbjct: 129 GAINATVTVGGVAEDTIRNIENVTGGAASDTLTGDDAANLLSGGNGNDLLKGAGGADILD 188
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G +G DT Y + + +D + ++E + +
Sbjct: 189 GGAGSDTVDYRDKTAAVAVTLNGATNASVKVGGVAEDTIRNIENIYGGSGADTLIGDGSS 248
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
++L A + L G D + ++ + + D +RN+
Sbjct: 249 NLLRGGAGADVLDGGAGVDTADYRDKTASVAVTLNGATNASVKVGGVAEDTIRNIENIYG 308
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
G+ A I G A + + D
Sbjct: 309 GSGADTLIGDGSSNLLRGGAGADVLDGGAGVDTA 342
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 84/295 (28%), Gaps = 31/295 (10%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E + + + + AD+ G G T+ + +
Sbjct: 149 ENVTGGAASDTLTGDDAANLLSGGNGNDLLKGAGGADILDGGAGSDTVDYRDKTAAVAVT 208
Query: 132 L-----------GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
L G+ N G D ++++ D + +
Sbjct: 209 LNGATNASVKVGGVAEDTIRNIENIYGGSGADTLIGDGSSNLLRGGAGADVLDGGAGVDT 268
Query: 181 ATPMVSDIVAVQKIYGAPKGSL-----GNNIYKIEVQQKDSPFIQTIYDSG--------- 226
A + GA S+ + + T+ G
Sbjct: 269 ADYRDKTASVAVTLNGATNASVKVGGVAEDTIRNIENIYGGSGADTLIGDGSSNLLRGGA 328
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV------IESVVGSSGNDVV 280
G D+LD +Y D + ++ G + V IE+V G +G D +
Sbjct: 329 GADVLDGGAGVDTADYSDKTSSVAVTLNGATNATVMVGGVVEDTVRNIENVTGGAGADTL 388
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+G+S+ N+ G+DV G+ G D + S + I+ D + +
Sbjct: 389 VGDSSANLLSGGGGDDVLTGAGGADRLTGGSGSDTFVFAPAFGQDIITDFSSTDR 443
>gi|78356461|ref|YP_387910.1| hypothetical protein Dde_1416 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218866|gb|ABB38215.1| hypothetical protein Dde_1416 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 1424
Score = 92.2 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 50/319 (15%), Positives = 87/319 (27%), Gaps = 8/319 (2%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ TE ++ G I + + G+ GND + GN ++ SG
Sbjct: 162 STSADASADIYGTEGDDTLTGTPSADRIHGLGGNDLLAGTGGNDTIFGNEGDDTLIGGSG 221
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+D+ DG SG+DT Y + + + D L +E L +
Sbjct: 222 DDMLDGGSGIDTASYAGAGSGV---QADLSAGTATGTTTGNDTLDGIENLTGSAFNDTLT 278
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ + L A + L G D + G D+ +
Sbjct: 279 GSDENNSLLGDAGDDRLFGGEGNDTLDGGADNDFLSGGAGNDLLHGGAGNDELRGGGGDD 338
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH-FSNF 473
Y G + + L + + L + G D +
Sbjct: 339 DLYGDAGDDTLYGGAGSDLLQGGEGDDVLHGGSGVDYLNGGAGNDTLNGGSGDDTLYGGT 398
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
G + R + LY +D Y G + L+ A +
Sbjct: 399 GDDLIRGGADNDTLYGEDGNDTLR----GNQGNDDLYGDAGDDRLFGGEGNDTLDGGADN 454
Query: 534 EDLINAFADAPDLVQAGKD 552
+ L + AG D
Sbjct: 455 DFLSGGAGNDLLHGGAGND 473
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/285 (18%), Positives = 94/285 (32%), Gaps = 12/285 (4%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ D + + + T + D G G T+ + G
Sbjct: 259 NDTLDGIENLTGSAFNDTLTGSDENNSLLGDAGDDRLFGGEGNDTLDGGADNDFLSGGAG 318
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G + G D + Y ++ G S + +
Sbjct: 319 NDLLHGGAGNDELRGGGGDDDLYGDAGDDTLYGGAGSDLLQGGEGDDVLHGGSGVDYLNG 378
Query: 194 IYGAPKGSLG---NNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
G + G + +Y + + T+Y G+D L G N
Sbjct: 379 GAGNDTLNGGSGDDTLYGGTGDDLIRGGADNDTLYGEDGNDTL----RGNQGNDDLYGDA 434
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G E N T+ + + G +GND++ G + N+ SGND+ DG +G DT
Sbjct: 435 GDDRLFGGEGNDTLDGGADNDFLSGGAGNDLLHGGAGNDTLTGGSGNDLLDGGAGNDTVV 494
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQD---FLSDVERLRFADQC 350
+ S Y I R ++ + N +D +++VE+L+F D
Sbjct: 495 FRGASGQYTITRTQDGGYRIEDNVEGRDGITTVTNVEQLQFKDGT 539
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 78/293 (26%), Gaps = 26/293 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT- 266
+ TI+ + GDD L + G + +D + ++ + A +
Sbjct: 193 GGNDLLAGTGGNDTIFGNEGDDTL---IGGSGDDMLDGGSGIDTASYAGAGSGVQADLSA 249
Query: 267 --------------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----- 307
IE++ GS+ ND + G+ NN +G+D G G DT
Sbjct: 250 GTATGTTTGNDTLDGIENLTGSAFNDTLTGSDENNSLLGDAGDDRLFGGEGNDTLDGGAD 309
Query: 308 --FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEY 364
F + ++ + + + + + +L
Sbjct: 310 NDFLSGGAGNDLLHGGAGNDELRGGGGDDDLYGDAGDDTLYGGAGSDLLQGGEGDDVLHG 369
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ + L G D G D+ Y + N
Sbjct: 370 GSGVDYLNGGAGNDTLNGGSGDDTLYGGTGDDLIRGGADNDTLYGEDGNDTLRGNQGNDD 429
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
Y G + L+ A ++ L + G D + +
Sbjct: 430 LYGDAGDDRLFGGEGNDTLDGGADNDFLSGGAGNDLLHGGAGNDTLTGGSGND 482
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLD---LTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
NIY + Q T++ G D G + +T + S G +
Sbjct: 1213 NIYFSDAQLNGGNQHATLHTDGTISWEDSRHWINNFGNDDIFVQHTTNQSGAHGSDHADM 1272
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ T+ +++VG +GND++ GN ++V +GND+ G G DTF + A
Sbjct: 1273 LIGGTLPDNLVGGAGNDILFGNEGHDVLNGGAGNDILTGGQGADTFVFTA 1322
Score = 44.0 bits (102), Expect = 0.093, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 8/159 (5%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
VQ GA ++ + ++V D T+ + G+ +D + +T
Sbjct: 792 VQAGSGADHITISGSTGNLDVSAGDGANHVTVSGAHGNTQIDTGTNADTVSVSGTSTRLD 851
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ GG +T++ SV +G D V +G V DG SG DT
Sbjct: 852 INTGGGSDTVTLSGSHTDVSVSTGAGKDHVT-------INGFAGAAVLDGGSGYDTLSLA 904
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
Y + +++++ D + D + E FAD
Sbjct: 905 GSRADYSFEKHGDSLLITDTYGNSLD-ATSFESFTFADG 942
>gi|254560485|ref|YP_003067580.1| glycosyl transferase [Methylobacterium extorquens DM4]
gi|254267763|emb|CAX23610.1| putative glycosyl transferase [Methylobacterium extorquens DM4]
Length = 1296
Score = 92.2 bits (227), Expect = 3e-16, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 80/232 (34%), Gaps = 31/232 (13%)
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP---------------- 437
GR FD Y Y DL + G + RHY+ HG EGR P
Sbjct: 23 GRGGGFDPDFYRRYYPDL-AILGDESKVLKRHYLDHGRAEGRFPNAAALVAALEAEGGAL 81
Query: 438 -DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
F Y A ++DL +H+ FG EGR D + Y+ +
Sbjct: 82 PSDFIPEHYRALYDDLAG-----LTEPWQLSEHYLRFGRFEGRAHGADLSAFEQEYERML 136
Query: 497 NVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLI-NAFADAPDLVQAGKDHF 554
+ G H + R P A+ L + L A P G F
Sbjct: 137 ASGAALNGRRPAESFVHLLVAARVLPGAWLDLFVLHEFALLNEGWLAHPPASRMEGLVAF 196
Query: 555 SNFGYEEGRSIT----FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
G E I+ F+P Y ++ D + G+ + +H++ G+++G
Sbjct: 197 LTEGVERLAPISLRLRFDPHFYRSNNPD--SSAGASDADLYRHWLGKGIQKG 246
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 44/133 (33%), Gaps = 24/133 (18%)
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-------- 566
+ E F Y + DL D ++ K H+ + G EGR
Sbjct: 19 ISEAGRGGGFDPDFYRRYYPDL-AILGDESKVL---KRHYLDHGRAEGRFPNAAALVAAL 74
Query: 567 ----------FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM 616
F P+ Y YDDL + ++ ++HY+ G EGRA G F+
Sbjct: 75 EAEGGALPSDFIPEHYRALYDDLAGL--TEPWQLSEHYLRFGRFEGRAHGADLSAFEQEY 132
Query: 617 NLSEKSRDKADLS 629
S +
Sbjct: 133 ERMLASGAALNGR 145
>gi|110633148|ref|YP_673356.1| heme peroxidase [Mesorhizobium sp. BNC1]
gi|110284132|gb|ABG62191.1| Animal heme peroxidase [Chelativorans sp. BNC1]
Length = 2950
Score = 91.8 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 73/568 (12%), Positives = 155/568 (27%), Gaps = 46/568 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + E + R +L + ++ E + + + N
Sbjct: 2022 DTYLVDDAGDSVLEDEAGGTDTVRSSLAAYMLAENV--ENLVLAAGATDGTGNALDNRLT 2079
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI-----GHALGLMHPGSYNGGYPVY 147
++ V G + + I G + L++ + G VY
Sbjct: 2080 GNSGDNVLDGGAGVDTVVLDGEVSDYDFVYAGANTIVTSPAGGSDTLVNIENVEIGGVVY 2139
Query: 148 ----------GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G+ V+ + + +D++A
Sbjct: 2140 NMVRGTNAANGIGGPVVGTDAADLVLGFNGADSLLGGGGDDLLVGGAGNDVMAGGAGNDT 2199
Query: 198 PKGSLGNNIYKIEV-QQKDSPFIQTIYDS---GGDDLLDLTLI------GGVKNYIDLNT 247
+ G ++ + S I TI S ++ + G N L
Sbjct: 2200 YLVNNGGDVVSEDPLAIPGSGGIDTIISSVTRNLNNTAQVVGDVENLILTGSGNINGLGN 2259
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ I G N + ++++G++G+D + G + +++ +G+D+ +G G+D
Sbjct: 2260 GLDNIISGNSGNNILTGAGGADTLIGNAGDDDLRGGANDDILEGGAGSDLLNGQGGIDIA 2319
Query: 308 FYYAPSYLYKIYRFENAIIVYDA--NEHKQDFLSDVERLRFADQ------CIDSVNVKQR 359
+ + Y N + + D L+ +ERLRF D I +
Sbjct: 2320 IFAGSAGDYSFSLGANGLATVTDLVGDGGTDTLTSIERLRFGDGPVLDIASIANGIPDGP 2379
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+I+ + + +I G+DV S+ D ++ D G
Sbjct: 2380 AIIFGSEGNDTIIGGPGEDVIIGGPGNDTLNGSDVGDGDDNTTPGTQDDDTFIWNVGDGF 2439
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ ++ Y D A + E+G
Sbjct: 2440 DTINGGMEGPNGDVFQIIGNAESETYRIYTYDEAVARI--GFAGSDETEIIVTREGEDGV 2497
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
T + + +A + +G F A + +
Sbjct: 2498 ETTIAELTEIEEIIVNGANVAGNGASAGDAFEIYG--------NFDATNLRPNTITIRGT 2549
Query: 540 FADAPDLVQAGKD-HFSNFGYEEGRSIT 566
D + + + H F + G
Sbjct: 2550 SGDDTVDISSLQSAHRIVFRSKGGDDTI 2577
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 80/563 (14%), Positives = 131/563 (23%), Gaps = 90/563 (15%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEI---------NFDKADVWRYGIGKGTILSHNALH 126
D + G AD+ G TI+ +
Sbjct: 1732 AGDGDNSITGLGGNDVINGGGGSDTLNGGAGMDTLKGGAGADIVNGQAGDDTIIYGSLDG 1791
Query: 127 EIGHALGLMHP------------------------GSYNGGYPVYGVDNDYENDSFLTSV 162
G H + G V G+++ + T
Sbjct: 1792 ADMIDGGADHDTLRIVESAGGGNDTVQIGLDGAGIITDVNGASVAGIESAQLDLGNGTDT 1851
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN------NIYKIEVQQKDS 216
+SY P ++ G V LGN + + +
Sbjct: 1852 LSYATPNAVTVNLLAGTATGFSYIRNVENVVSGDGNDTLLGNLADNLLDGAGGDDTIRGG 1911
Query: 217 PFIQTIYDSGGDDLLDLTLIG------------------GVKNYIDLNTESWSSIGGYEK 258
T+ G+DLL +Y D + ++G
Sbjct: 1912 FGNDTLIGRAGNDLLYGEAGDDTLRGGDGDDRLDGGQGVDTVSYADASAAVTVTLGSQSP 1971
Query: 259 NMTIAQH----TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
T+ IE++ GS+ ND + GNS NV SG D G G DT+
Sbjct: 1972 QDTVGAGNDMLVSIENLTGSAFNDTLTGNSGANVIDGGSGQDAMAGGGGDDTYLVDDAGD 2031
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
V ++ +VE L A D + L + L
Sbjct: 2032 SVLEDEAGGTDTVR-SSLAAYMLAENVENLVLAAGATDGTGNALDNRLTGNSGDNVLDGG 2090
Query: 375 IGQDV------------FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
G D + + + G D + V G++
Sbjct: 2091 AGVDTVVLDGEVSDYDFVYAGANTIVTSPAGGSDTLVNIENVEIGGVVYNMVRGTNAANG 2150
Query: 423 ARH-----------YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+G L A ++ + + LV G D S
Sbjct: 2151 IGGPVVGTDAADLVLGFNGADSLLGGGGDDLLVGGAGNDVMAGGAGNDTYLVNNGGDVVS 2210
Query: 472 NFGCEEGRFVTFDS--YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
D+ + ++ V G G G +
Sbjct: 2211 EDPLAIPGSGGIDTIISSVTRNLNNTAQVVGDVENLILT---GSGNINGLGNGLDNIISG 2267
Query: 530 IASHEDLINAFADAPDLVQAGKD 552
+ + L A + AG D
Sbjct: 2268 NSGNNILTGAGGADTLIGNAGDD 2290
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/381 (14%), Positives = 99/381 (25%), Gaps = 61/381 (16%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + G + I G + T+ ++++ G +G D+V G + ++
Sbjct: 1727 DNLVQAGDGDNSITGLGGNDVINGGGGSDTLNGGAGMDTLKGGAGADIVNGQAGDDTIIY 1786
Query: 292 S--SGNDVFDGSSGLDTF--FYYAPSYLYKIY-RFENAIIVYDAN--------------E 332
G D+ DG + DT A + + A I+ D N
Sbjct: 1787 GSLDGADMIDGGADHDTLRIVESAGGGNDTVQIGLDGAGIITDVNGASVAGIESAQLDLG 1846
Query: 333 HKQDFLS-----------------------DVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ D LS +VE + D + ++L+ +
Sbjct: 1847 NGTDTLSYATPNAVTVNLLAGTATGFSYIRNVENVVSGDGNDTLLGNLADNLLDGAGGDD 1906
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDS----------YLYLGSYDDLRNVFGSDR 419
+ G D G D + SY D
Sbjct: 1907 TIRGGFGNDTLIGRAGNDLLYGEAGDDTLRGGDGDDRLDGGQGVDTVSYADASAAVTVTL 1966
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
G+ + + + + L A ++ L G+D + G ++
Sbjct: 1967 GSQSPQDTVGAGNDML--VSIENLTGSAFNDTLTGNSGANVIDGGSGQDAMAGGGGDDTY 2024
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDAFKALE-YIASHEDLI 537
V L G+D ++ Y+ E A A L
Sbjct: 2025 LVDDAGDSVLED-----EAGGTDTVRSSLAAYMLAENVENLVLAAGATDGTGNALDNRLT 2079
Query: 538 NAFADAPDLVQAGKDHFSNFG 558
D AG D G
Sbjct: 2080 GNSGDNVLDGGAGVDTVVLDG 2100
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 56/160 (35%), Gaps = 9/160 (5%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
DLT G +NYI IGG E + TI +++ G GND + G + ++
Sbjct: 1027 DLTTTGPDENYIRFLGGEHVVIGGTEGDDTIISDFGDDALWGGGGNDRIEGGAGVDLIIG 1086
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
SG+D+ DT + + N + V + K FL V+
Sbjct: 1087 GSGDDIIT--DSGDTGDFIKGEDGDDVIANANGLDVLMGGDGKDVFLVGVD-------AT 1137
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ + + A + ++ G D E F
Sbjct: 1138 EVFAGEGDDFVLGGADADFILGNEGDDWIEGGDGFDVLNG 1177
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 56/173 (32%), Gaps = 14/173 (8%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G+D +I + ++ + GND +G +G+D + + + E
Sbjct: 1050 GTEGDDTIISDFGDDALWGGGGNDRIEGGAGVDLIIGGSGDDIITDSGDTG---DFIKGE 1106
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D +++ A+ + + + ++ G D +
Sbjct: 1107 DGDDVIAN------ANGLDVLMGGDGKDVFLVGVDATEVFAGEGDDFVLGGADADFILGN 1160
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
EG D ++ G D+ N S+ + + G N + F A
Sbjct: 1161 EG-----DDWIEGGDGFDVLNGDNSELFFNSTIKGHDVLFAGENENDFDAESG 1208
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/250 (13%), Positives = 67/250 (26%), Gaps = 9/250 (3%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + T +I G + + ++V+G SG D++ G++ N+ +G D
Sbjct: 2683 GTEQADALTGTADGETIMGLGGRDVVFAGSGDDNVMGGSGADMLYGDAGNDRILAGAGGD 2742
Query: 297 VFDGSSGLDTFFYYAPSY---LYKIYRFENAIIVYDANEHKQDFL------SDVERLRFA 347
+ G +G DT F + + D L +++
Sbjct: 2743 LVTGGAGNDTVFGQGGDDMIVAQADDGDDVYYGDGMSGGSGNDTLDMSAIGANITADLGT 2802
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
S + E+++ G D G D
Sbjct: 2803 GFMGRGSVSSAASGSDTIWGVENIVTGSGNDTITGSNAANVMDGGTGNDTFRFLSAAAAD 2862
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
D + D+ + ++ A E L+ + V +
Sbjct: 2863 GDTIIGFQPGDKIDLSGMDANWCESGNQSFTLVSDAFTGAKGELLVTHETQDGESYTVVQ 2922
Query: 468 DHFSNFGCEE 477
+ S +
Sbjct: 2923 GNISGGSDAD 2932
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 55/178 (30%), Gaps = 24/178 (13%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ ++ GG+D + DL + G + I + ++ I G + + I
Sbjct: 1053 GDDTIISDFGDDALWGGGGNDRIEGGAGVDLIIGGSGDDIITDSGDTGDFIKGEDGDDVI 1112
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A ++ ++G G DV + F G+D G + D +
Sbjct: 1113 ANANGLDVLMGGDGKDVFLVGVDATEVFAGEGDDFVLGGADAD-------------FILG 1159
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
N + D L+ F + I +L + D G D+
Sbjct: 1160 NEGDDWIEGGDGFDVLNGDNSELFFNSTIK-----GHDVLFAGENENDFDAESGDDIM 1212
Score = 45.2 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 25/213 (11%), Positives = 44/213 (20%), Gaps = 10/213 (4%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++ D + ++ + L G D + G D
Sbjct: 1725 VGDNLVQAGDGDNSITGLGGNDVINGGGGSDTLNGGAGMDTLKGGAGADIVNGQAGDDTI 1784
Query: 399 F-------DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
D +D LR V + G G + + ++ D
Sbjct: 1785 IYGSLDGADMIDGGADHDTLRIVESAGGGNDTVQIGLDGAGIITDVNGASVAGIESAQLD 1844
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
L N G G + + D + +
Sbjct: 1845 LGNGTDTLSYATPNAVTVNLLAGTATGFSYIRNVENVVS--GDGNDTLLGNLADNLLD-G 1901
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
G R L A ++ L D
Sbjct: 1902 AGGDDTIRGGFGNDTLIGRAGNDLLYGEAGDDT 1934
Score = 45.2 bits (105), Expect = 0.041, Method: Composition-based stats.
Identities = 65/541 (12%), Positives = 120/541 (22%), Gaps = 90/541 (16%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG-- 133
NG +S + AD G + + G
Sbjct: 2249 TGSGNINGLGNGLDNIISGNSGNNILTGAGGADTLIGNAGDDDLRGGANDDILEGGAGSD 2308
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L++ G DY + + + D +
Sbjct: 2309 LLNGQGGIDIAIFAGSAGDYSFSLGANGLATVTDLVGDGGTDTLTSIERLRFGDGPVLDI 2368
Query: 194 IYGAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
A G I P I G+D L+ + D+
Sbjct: 2369 ASIANGIPDGPAIIFGSEGNDTIIGGPGEDVIIGGPGNDTLNGS---------DVGDGDD 2419
Query: 251 SSIGGYEKNMTIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDV-FDGSSGLDTF 307
++ G + + T + +++ G +G+ G++ +T+
Sbjct: 2420 NTTPGTQDDDTFIWNVGDGFDTINGG--------------MEGPNGDVFQIIGNAESETY 2465
Query: 308 FYYAPSYLYKIYRFENAI----IVYDANEHKQDF----LSDVERLRFADQCIDSVNVKQR 359
Y F + IV E + L+++E + +
Sbjct: 2466 RIYTYDEAVARIGFAGSDETEIIVTREGEDGVETTIAELTEIEEIIVNGANVAGNGASAG 2525
Query: 360 SILEYTASYE---------DLIQVIGQDVFESM----KHFYEFGLSEGRDIT-------- 398
E +++ + G D + H F G D
Sbjct: 2526 DAFEIYGNFDATNLRPNTITIRGTSGDDTVDISSLQSAHRIVFRSKGGDDTIVGTLRPQD 2585
Query: 399 ---FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN------------------- 436
L YD ++NV G+ + H +T G
Sbjct: 2586 VVELPDGTTLDDYDLVQNVNGTITLSGESHSVTFYSTGGLPQFSSGDDDGAHDDDEDDDA 2645
Query: 437 --PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD- 493
+ A P +G + T D +G
Sbjct: 2646 PPSGNDDGDDDDGHGSCDDGDEAGDPAPNPIGASVILGTEQADALTGTADGETIMGLGGR 2705
Query: 494 DLRNVFGSDRG-----AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
D+ D A Y G + A ++ + D + Q
Sbjct: 2706 DVVFAGSGDDNVMGGSGADMLYGDAGNDRILAGAGGDLVTGGAGNDTVFGQGGDDMIVAQ 2765
Query: 549 A 549
A
Sbjct: 2766 A 2766
Score = 42.1 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 10/98 (10%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ G+D LD++ IG DL T +E++V SGND +
Sbjct: 2778 MSGGSGNDTLDMSAIGAN-ITADLGTGFMGRGSVSSAASGSDTIWGVENIVTGSGNDTIT 2836
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
G++A N V DG +G DTF + + +
Sbjct: 2837 GSNAAN---------VMDGGTGNDTFRFLSAAAADGDT 2865
>gi|289609587|emb|CBI60417.1| unnamed protein product [Sordaria macrospora]
Length = 111
Score = 91.8 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/106 (46%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
FD Y +Y DLR FG+D AA RHYI G EGR F AL Y A++ DL AF
Sbjct: 9 FDPLTYTAAYADLRQAFGTDSAAATRHYILWGKNEGRT-AQFDALGYTAAYNDLRAAFGA 67
Query: 543 APDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRS 588
D AG H+ FG EGRS+TF+ YL S +L FG+DR+
Sbjct: 68 DVD---AGAAHYIRFGAAEGRSVTFDAIGYLASNPELITDFGTDRT 110
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
GR+P AF L Y A++ DL AF H+ +G EGR FD+ Y +Y+
Sbjct: 3 GRDPLAFDPLTYTAAYADLRQAFGTDS---AAATRHYILWGKNEGRTAQFDALGYTAAYN 59
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
DLR FG+D A A HYI G EGR+ F A+ Y+AS+ +LI F
Sbjct: 60 DLRAAFGADVDAGAAHYIRFGAAEGRSVT-FDAIGYLASNPELITDFGTD 108
Score = 79.1 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD 577
GR+P AF L Y A++ DL AF A H+ +G EGR+ F+ Y +Y+
Sbjct: 3 GRDPLAFDPLTYTAAYADLRQAFGTDS---AAATRHYILWGKNEGRTAQFDALGYTAAYN 59
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM 616
DL FG+D A A HYI G EGR++ + + +
Sbjct: 60 DLRAAFGADVDAGAAHYIRFGAAEGRSVTFDAIGYLASN 98
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ L YTA+Y DL Q G D + +H+ +G +EGR FD+ Y +Y+DLR
Sbjct: 5 DPLAFDPLTYTAAYADLRQAFGTDSAAATRHYILWGKNEGRTAQFDALGYTAAYNDLRAA 64
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
FG+D A A HYI G EGR+ F A+ Y+AS+ +LI F
Sbjct: 65 FGADVDAGAAHYIRFGAAEGRSVT-FDAIGYLASNPELITDFGTD 108
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/113 (46%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 393 EGRDIT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
GRD FD Y +Y DLR FG+D AA RHYI G EGR F AL Y A++ D
Sbjct: 2 LGRDPLAFDPLTYTAAYADLRQAFGTDSAAATRHYILWGKNEGRT-AQFDALGYTAAYND 60
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
L AF D G H+ FG EGR VTFD+ YL S +L FG+DR
Sbjct: 61 LRAAFGADVD---AGAAHYIRFGAAEGRSVTFDAIGYLASNPELITDFGTDRT 110
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 36/69 (52%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ Q L YTA+Y DL G DV H+ FG +EGR +TFD+ YL S +L
Sbjct: 42 NEGRTAQFDALGYTAAYNDLRAAFGADVDAGAAHYIRFGAAEGRSVTFDAIGYLASNPEL 101
Query: 412 RNVFGSDRG 420
FG+DR
Sbjct: 102 ITDFGTDRT 110
Score = 43.6 bits (101), Expect = 0.097, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 562 GRSI-TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMN 617
GR F+P Y +Y DL FG+D +AA +HYI G EGR + + + N
Sbjct: 3 GRDPLAFDPLTYTAAYADLRQAFGTDSAAATRHYILWGKNEGRTAQFDALGYTAAYN 59
>gi|126741048|ref|ZP_01756730.1| hypothetical protein RSK20926_01017 [Roseobacter sp. SK209-2-6]
gi|126717812|gb|EBA14532.1| hypothetical protein RSK20926_01017 [Roseobacter sp. SK209-2-6]
Length = 858
Score = 91.8 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 77/280 (27%), Gaps = 8/280 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-----VKNYIDLNTESWSSIGGYEKNMTI 262
IY G+D L + + S+ G N ++
Sbjct: 515 GGHDSLAGGDGADRIYGGTGNDHLSGEADSDRIEGEDGHDSLFGGSAHDSLYGGMGNDSL 574
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A T + + G GND + G+S+ + + GND G +G DT + + +++
Sbjct: 575 AGETGADHLYGGWGNDTLSGDSSTDRLYGEGGNDSLTGGTGNDTLY--GGAGHDRLFGNS 632
Query: 323 NAIIVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ +Y H V+ + LE + L G D+
Sbjct: 633 SLDTLYGEGGHDYISAGDGVDFVSGGSGNDTIHGRSGWDNLEGGDGNDSLYGSEGDDLIR 692
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ D F + Y + + S + G R +
Sbjct: 693 GGRDNDWVSAGSAWDQIFGNSGDDTLYGNFGSDQISGGSGRDSLFGGTGDDTLRGGSSSD 752
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
AL + L + D F + +
Sbjct: 753 ALYGNQGVDHLEGGSGNDTLRGGTLADSFIFAPNHDSDLI 792
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/345 (13%), Positives = 86/345 (24%), Gaps = 50/345 (14%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ + + +GG+D + L + + G + ++A + + G
Sbjct: 485 NGTAAAEQLVGAGGNDTV-------------LGLGAADRLYGQGGHDSLAGGDGADRIYG 531
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+GND + G + ++ G+D G S D+ + + A +Y
Sbjct: 532 GTGNDHLSGEADSDRIEGEDGHDSLFGGSAHDSLY--GGMGNDSLAGETGADHLYGGW-- 587
Query: 334 KQDFLSD---VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D LS +RL L A ++ L D
Sbjct: 588 GNDTLSGDSSTDRLYGEGGNDSLTGGTGNDTLYGGAGHDRLFGNSSLDTLYGEGGHDYIS 647
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
+G D + G+D + G D +L +
Sbjct: 648 AGDGVDF-------------VSGGSGNDTI-----HGRSGWDNLEGGDGNDSLYGSEGDD 689
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
+ + D ++ + F S S +
Sbjct: 690 LIRGGRDNDWVSAGSAWDQIFGNSGDDTLYGNFGSDQI------------SGGSGRDSLF 737
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G R + AL + L + D F
Sbjct: 738 GGTGDDTLRGGSSSDALYGNQGVDHLEGGSGNDTLRGGTLADSFI 782
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 71/290 (24%), Gaps = 9/290 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + AD G G T+ ++ + G
Sbjct: 548 EGEDGHDSLFGGSAHDSLYGGMGNDSLAGETGADHLYGGWGNDTLSGDSSTDRLYGEGGN 607
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G +YG + Y + A G S +
Sbjct: 608 DSLTGGTGNDTLYGGAGHDRLFGNSSLDTLYGEGGHDYISAGDGVDFVSGGSGNDTIHGR 667
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTES 249
G G+ S I +D + + G +
Sbjct: 668 SGWDNLEGGD----GNDSLYGSEGDDLIRGGRDNDWVSAGSAWDQIFGNSGDDTLYGNFG 723
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
I G ++ T +++ G S +D + GN + SGND G + D+F +
Sbjct: 724 SDQISGGSGRDSLFGGTGDDTLRGGSSSDALYGNQGVDHLEGGSGNDTLRGGTLADSFIF 783
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
I F D ++ + + S+ V+
Sbjct: 784 APNHDSDLIEDFTPWQDELHFASALVDGATNTRAVVEEFARVTSLGVQFD 833
Score = 42.9 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 46/327 (14%), Positives = 86/327 (26%), Gaps = 52/327 (15%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--------- 314
T E + GS+ + + G+S +++ + G +G D F + A +
Sbjct: 350 GTTAGEVLEGSTSD--LSGSSEDDLILAGAAQRRLWGGAGEDIFVFAAGASRSGASCRVM 407
Query: 315 ---------------------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
+I N + + SD L + D ++
Sbjct: 408 DFNPEEDRIDLQAWAGLRSVDQLQITSHSNGATLRYGAYELRLITSDTRALTYEDFILND 467
Query: 354 VNVKQRS--------ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ R +L TA+ E L+ G D + G D L
Sbjct: 468 LLGLYRPPLPTDTPLVLNGTAAAEQLVGAGGNDTVLGLGAADRLYGQGGHD-------SL 520
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
D ++G EG + +L ++H+ L + +
Sbjct: 521 AGGDGADRIYGGTGNDHLSGEADSDRIEGEDGH--DSLFGGSAHDSLYGGMGNDSLAGET 578
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
G DH + + G + G+ Y G +
Sbjct: 579 GADHLYGGWGNDTLSGDSSTDRLYGEGGNDSLTGGTGNDTL---YGGAGHDRLFGNSSLD 635
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKD 552
L H+ + +G D
Sbjct: 636 TLYGEGGHDYISAGDGVDFVSGGSGND 662
>gi|119383312|ref|YP_914368.1| hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
gi|119373079|gb|ABL68672.1| Hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
Length = 1079
Score = 91.8 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 64/487 (13%), Positives = 116/487 (23%), Gaps = 36/487 (7%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH------------NA 124
D + + I D G G T
Sbjct: 548 QDGNDRFTGYAGNDNVDGGAGNDTLIGGAGNDTLNGGSGIDTAAYGSATAGVTVNLALTT 607
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+G G+ D N + + +
Sbjct: 608 AQAVGGGQGVDTLIDIENVNGSAYADALLGNAAANLLQGAGGNDTLDGGAGNDTLSGGAG 667
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+ D A + +LG ++ + +++I + G D N +
Sbjct: 668 M-DTAAYGRASSGVTVNLGLTGAQLVGGGQGRDVLRSIENIDGSGFADRLTGNAGSNALR 726
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ S + G N + + ++G +GNDV+ G++ N++ +GND +G +G+
Sbjct: 727 GGAGNDS-LSGLGGNDRLFGGAGADQLLGGAGNDVLNGDAGNDLLNGGAGNDTLNGGAGI 785
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT Y S + + +D L ++E + + ++L
Sbjct: 786 DTAAYGGASSGVTV-NLGLTVAQLIGGGQGRDVLRNIENVNGSGFADRLTGNTGNNVLNG 844
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
A + L G+D + G D D L G D A
Sbjct: 845 AAGNDTLSGGAGRDQLLGGAGADQLLGGAGNDTL----NGGAGNDTLNGGAGIDTAAYGG 900
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
V G + + N R
Sbjct: 901 ASSGVTVNLGLT---------------VAQLIGGGQGRDVLRNIENVNGSGFADRLTGNA 945
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
L N S + G L A ++ L
Sbjct: 946 GNNVL--NGAAGNDTLSGGAGRDQLSGGAGADRLLGGAGNDTLNGGAGNDTLTGGVGADV 1003
Query: 545 DLVQAGK 551
+ G
Sbjct: 1004 FVFAVGN 1010
Score = 88.7 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 71/497 (14%), Positives = 121/497 (24%), Gaps = 39/497 (7%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA---LGL 134
D + + + D G G T+ + G
Sbjct: 420 DGNDTFTGYAGNDNVDGGAGNDVLNGGAGNDTLIGGSGNDTLNGGSGNDYFYIGGTDFGH 479
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + V ++ LTS + V DI + +
Sbjct: 480 DVYNGGEGSDEIRLVGKVTVSNLSLTSANVISTETLNFYGYGIEGTGGNDVFDISGMTYV 539
Query: 195 YG-----APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD--------LTLIGGVKN 241
G G+ Y T+ G+D L+
Sbjct: 540 SGYSRIYMQDGNDRFTGYAGNDNVDGGAGNDTLIGGAGNDTLNGGSGIDTAAYGSATAGV 599
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
++L + ++GG + T+ IE+V GS+ D ++GN+A N+ + GND DG
Sbjct: 600 TVNLALTTAQAVGGGQGVDTLID---IENVNGSAYADALLGNAAANLLQGAGGNDTLDGG 656
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIV--------YDANEHKQDFLSDVERLRFADQCIDS 353
+G DT A R + + V +D L +E + +
Sbjct: 657 AGNDTLSGGAGMDTAAYGRASSGVTVNLGLTGAQLVGGGQGRDVLRSIENIDGSGFADRL 716
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ L A + L + G D + G D+ +DL N
Sbjct: 717 TGNAGSNALRGGAGNDSLSGLGGNDRLFGGAGADQLLGGAGNDVLNGDA-----GNDLLN 771
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ I G + L + + N
Sbjct: 772 GGAGNDTLNGGAGIDTAAYGGASSGVTVNL-----GLTVAQLIGGGQGRDVLRNIENVNG 826
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
R L N S + G + L A +
Sbjct: 827 SGFADRLTGNTGNNVL--NGAAGNDTLSGGAGRDQLLGGAGADQLLGGAGNDTLNGGAGN 884
Query: 534 EDLINAFADAPDLVQAG 550
+ L
Sbjct: 885 DTLNGGAGIDTAAYGGA 901
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 71/508 (13%), Positives = 134/508 (26%), Gaps = 44/508 (8%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY-GIGKGTILSHN 123
V +L+ ++ S G T D + + Y G T +
Sbjct: 112 VSNLSLTSANVISTETLNFYGYGVEGTGGNDVFDISGMTYVSGYSRIYMFDGNDTFTGYA 171
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
+ G G + G + + + Y + D G +
Sbjct: 172 GNDNVDGGAGNDVLNGGAGNDTLIGGSGNDTLNGGSGNDYFYIGGTNFGHDVYNGGEGSD 231
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
++ + +L + + + + + +GG+D+ D++ + V
Sbjct: 232 ------EIRLVGKVTVSNLSLTSANVISTETLNFYGYGVEGTGGNDVFDISGMTYVS--- 282
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+S I ++ N T + ++V G +GNDV+ G + N+ SGND +G SG
Sbjct: 283 -----GYSRIYMFDGNDTFTGYAGNDNVDGGAGNDVLNGGAGNDTLIGGSGNDTLNGGSG 337
Query: 304 LDTFFYYAPSYLYKIYRFENAI--------IVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D F+ + + +Y + + E L F ++
Sbjct: 338 NDYFYIGGTDFGHDVYNGGEGSDEIRLVGKVTVSNLSLTSANVIGTETLNFYGYGVEGTG 397
Query: 356 V------------KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
S + + G D + G D
Sbjct: 398 GNDVFDISGMTYVSGYSRIYMFDGNDTFTGYAGNDNVDGGAGNDVLNGGAGNDTLIGGSG 457
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
D L G+D H V G L + +L A+
Sbjct: 458 ----NDTLNGGSGNDYFYIGGTDFGHDVYNGGEGSDEIRLVGKVTVSNLSLTSANVISTE 513
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
+ + G Y+ Y + G+DR G
Sbjct: 514 TLNFYGYGIEGTGGNDVFDISGMTYVSGYSRIYMQDGNDRFTGYA-----GNDNVDGGAG 568
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGK 551
L A ++ L +
Sbjct: 569 NDTLIGGAGNDTLNGGSGIDTAAYGSAT 596
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 76/526 (14%), Positives = 141/526 (26%), Gaps = 66/526 (12%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY-GIGKGTILSHN 123
V +L+ ++ G T D + + Y G T +
Sbjct: 370 VSNLSLTSANVIGTETLNFYGYGVEGTGGNDVFDISGMTYVSGYSRIYMFDGNDTFTGYA 429
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
+ G G + G + + + Y D D G +
Sbjct: 430 GNDNVDGGAGNDVLNGGAGNDTLIGGSGNDTLNGGSGNDYFYIGGTDFGHDVYNGGEGSD 489
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
++ + +L + + + + I +GG+D+ D++ + V
Sbjct: 490 ------EIRLVGKVTVSNLSLTSANVISTETLNFYGYGIEGTGGNDVFDISGMTYVS--- 540
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+S I + N + ++V G +GND +IG + N+ +G SG
Sbjct: 541 -----GYSRIYMQDGNDRFTGYAGNDNVDGGAGNDTLIGGAGNDTL---------NGGSG 586
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+DT Y + + + D L D+E + + + ++L+
Sbjct: 587 IDTAAYGSATAGVTV-NLALTTAQAVGGGQGVDTLIDIENVNGSAYADALLGNAAANLLQ 645
Query: 364 YTASYEDLIQVIGQDVFESMKHFYE---------------------FGLSEGRDITFDSY 402
+ L G D G +GRD+
Sbjct: 646 GAGGNDTLDGGAGNDTLSGGAGMDTAAYGRASSGVTVNLGLTGAQLVGGGQGRDVLRSIE 705
Query: 403 LYLGSY-----------DDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFKALEYIA 447
GS + LR G+D + + G + L A
Sbjct: 706 NIDGSGFADRLTGNAGSNALRGGAGNDSLSGLGGNDRLFGGAGADQLLGGAGNDVLNGDA 765
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
++ L + G D + G G V + G D
Sbjct: 766 GNDLLNGGAGNDTLNGGAGIDTAAYGGASSGVTVNLGLTVAQLIGGG----QGRDVLRNI 821
Query: 508 RHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G + L A ++ L L AG D
Sbjct: 822 ENVNGSGFADRLTGNTGNNVLNGAAGNDTLSGGAGRDQLLGGAGAD 867
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/318 (16%), Positives = 82/318 (25%), Gaps = 29/318 (9%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI E+++G++ D++ G N+ SGND G SG DTF + IY
Sbjct: 37 TITGTDNSETLLGTANADLINGLGGNDTITGGSGNDTMHGGSGDDTFLIGGTDIGHDIYD 96
Query: 321 FE--------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV------------KQRS 360
N + + E L F ++ S
Sbjct: 97 GGDGADQIRLNGTLKVSNLSLTSANVISTETLNFYGYGVEGTGGNDVFDISGMTYVSGYS 156
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ + G D + G D D L G+D
Sbjct: 157 RIYMFDGNDTFTGYAGNDNVDGGAGNDVLNGGAGNDTLIGGSG----NDTLNGGSGNDYF 212
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
H V G L + +L A+ + + G
Sbjct: 213 YIGGTNFGHDVYNGGEGSDEIRLVGKVTVSNLSLTSANVISTETLNFYGYGVEGTGGNDV 272
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
Y+ Y + G+D G L A ++ LI
Sbjct: 273 FDISGMTYVSGYSRIYMFDGNDTFTGYA-----GNDNVDGGAGNDVLNGGAGNDTLIGGS 327
Query: 541 ADAPDLVQAGKDHFSNFG 558
+ +G D+F G
Sbjct: 328 GNDTLNGGSGNDYFYIGG 345
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/268 (12%), Positives = 67/268 (25%), Gaps = 27/268 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
D+ + D G G T A + LGL GG
Sbjct: 754 GGAGNDVLNGDAGNDLLNGGAGNDTLNGGAGIDTAAYGGASSGVTVNLGLTVAQLIGGGQ 813
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ N + + +++++ + G + + GA + G
Sbjct: 814 GRDVLRNIENVNGSGFADRLTGNTGNNVLNGAAGNDTLSGGAGRDQLLGGAGADQLLGG- 872
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL------------------- 245
T+ G D
Sbjct: 873 ---AGNDTLNGGAGNDTLNGGAGIDTAAYGGASSGVTVNLGLTVAQLIGGGQGRDVLRNI 929
Query: 246 ----NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ + G N + +++ G +G D + G + + +GND +G
Sbjct: 930 ENVNGSGFADRLTGNAGNNVLNGAAGNDTLSGGAGRDQLSGGAGADRLLGGAGNDTLNGG 989
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+G DT + ++ A + D
Sbjct: 990 AGNDTLTGGVGADVFVFAVGNGADRITD 1017
>gi|149184368|ref|ZP_01862686.1| type I secretion target repeat protein [Erythrobacter sp. SD-21]
gi|148831688|gb|EDL50121.1| type I secretion target repeat protein [Erythrobacter sp. SD-21]
Length = 1120
Score = 91.8 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 80/486 (16%), Positives = 136/486 (27%), Gaps = 55/486 (11%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKFISSNNGYVCTPRYDSRYF--- 99
+ + QE+AR A+ E+++ L E D+ F+ + + F
Sbjct: 50 FQQFSQAYQELARQAIAEFTEASGLVAFEVPDGMGDMNFMIFDLALFSVAGGQAAGFANY 109
Query: 100 -MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
++ A G + LHEI HALGL H + D D+
Sbjct: 110 PTTGDWADASDVYIDDEIGEENYYLLLHEIAHALGLEHGWEGTNVF-------DASVDTA 162
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
S++S + + G+ T DI A+Q +YG GN++ +
Sbjct: 163 EFSILS--------SNGAIGFNGTLEAFDIQAIQYMYGDASAD-GNSVSSWYWNDQAH-- 211
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
I T G D L + + I G + + I +++ G +G+D
Sbjct: 212 ILTQVGLAGADTLR-------------GVGADNIIYGADGDDVIYGRDGADALYGGNGDD 258
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V +G+D G G D F + I DA + D
Sbjct: 259 TV---------SGGAGDDEIRGGEGADELF-----GETSNLTSGDDRIFGDAGDDYIDGG 304
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + + R IL ++ + L G DV + +G D+
Sbjct: 305 NGEDLILGGTGADRIFGGTGRDILYGNSNADSLYGGAGADVLYAGDGDDYADGGDGNDVM 364
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
G+ +D + D I
Sbjct: 365 RG-----GAGNDQLYGERGSGETGNDQIFGELGNDALYGQEGDDWISGGLGADTIQGGNG 419
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
L + YL + + +G +G G
Sbjct: 420 DDLLFGNEDRDTLLGNAGDDTLYGGGGDDYLQTGLGINLAYGGAGADQFWLDEGNGSLYG 479
Query: 519 RNPDAF 524
D F
Sbjct: 480 GEGDDF 485
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 65/197 (32%), Gaps = 9/197 (4%)
Query: 204 NNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
N +Y + +++ G+D+L + ID N E
Sbjct: 706 NTLYGSANADLLEGLEGGDSLHGGAGNDVLVGDDRHPNADLIDGNNEID------GGPDY 759
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G GND + G N+ GND+ G +G+DT Y + ++ +
Sbjct: 760 LNGGAGDDRMYGVVGNDQLYGGDGNDRLEGGEGNDILHGGAGIDTVRYVTATSGVRVNLY 819
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D L+ +E +D ++++ + L +G D +
Sbjct: 820 VTGVWQDTQGA-GNDQLNSIENFDGSDFADTVAGTVFSNVIDGRGGDDLLKGGMGNDALK 878
Query: 382 SMKHFYEFGLSEGRDIT 398
+ G D+
Sbjct: 879 GGDGDDQLEGYIGDDVL 895
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 8/165 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ K + ++ G+D+++ G N I L + + G T+
Sbjct: 917 GGDDYMKGNNGTDRMFGGTGNDIIEGGNQTDYLFGQQGNDILLGDDGDDFMQGNVGTDTL 976
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + + G++GND++ G N++ S G D G + DTF + +
Sbjct: 977 HGGSGNDRLDGNNGNDILRGGDGNDILTGSWGVDTMTGGTEADTFLFKSGHTG---RFAT 1033
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
NA + D + D + + A D+ + TA
Sbjct: 1034 NADTILDFSSEDGDRIDLSQIDAVAGGGDDAFAFIGDAAFSGTAG 1078
>gi|77465538|ref|YP_355041.1| hemolysin-type calcium-binding region, RTX [Rhodobacter sphaeroides
2.4.1]
gi|77389956|gb|ABA81140.1| Hemolysin-type calcium-binding region, RTX [Rhodobacter sphaeroides
2.4.1]
Length = 556
Score = 91.8 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/359 (12%), Positives = 89/359 (24%), Gaps = 17/359 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM------TI 262
T+ G+D + E N +
Sbjct: 83 GNDTLAGGLGNDTLQGGAGNDTASYETATEGVTVSLALQGEGQFVNAQEGNDPLTSIENL 142
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++G G++V+ G + N+V +GND G +G D Y A + +
Sbjct: 143 TGSNHDDTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATGGVTVNLAR 202
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + D LS +E + + +++ + G D
Sbjct: 203 DGQAQIIGADQGTDVLSSIEGVIGSAFNDILSGSAVANLIFGGDGADLATGGAGNDTILG 262
Query: 383 MKHFYEFGLSEGRDITFDSYL-----YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
+ G D+ F D + FG D A +G +
Sbjct: 263 GAGSDSLYGNLGDDLLFGDVGNDWIHGGQGNDTVLGGFGDDTLAGGVGDDVVDGGDGIDT 322
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHF----SNFGCEEGRFVTFDSYLYLGSYD 493
F+ + + + A + F + R + +
Sbjct: 323 VEFQTATAGVTVDLSLQGQAQRISAEEGTDTLFSIENILGSRYDDRLLGDAGSNLIDGSA 382
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G + G L ++ L + + AG D
Sbjct: 383 GNDTAMGQAGEDLI--FGGDGNDSLYGNQDNDTLVGGNGNDWLHGGQGNDLLVGDAGSD 439
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 46/300 (15%), Positives = 89/300 (29%), Gaps = 8/300 (2%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + + S G D++ + GG N + E N ++
Sbjct: 5 NLEGTDGADLLIGSRGADVISGRMFNDTLMGGAGNDSLYGNGDDDRLYVNEGNDSLYGEE 64
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G G+D+V+G N+ GND G +G DT Y + +
Sbjct: 65 GNDWLHGGQGDDLVVGGDGNDTLAGGLGNDTLQGGAGNDTASYETATEGVTVSLALQGEG 124
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ + D L+ +E L ++ + + ++L A + L+ G D
Sbjct: 125 QFVNAQEGNDPLTSIENLTGSNHDDTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGN 184
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
+ + G + G+D ++ I + + A L +
Sbjct: 185 DIADYAAATGGVTVNLARDGQAQIIGADQGTDVLSSIEGVIGSAFNDILSGSAVANLIFG 244
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF---VTFDSYLYLGSYDDLRNVFGSDR 503
DL A ++ + V D D + FG D
Sbjct: 245 GDGADLATGGAGNDTILGGAGSDSLYGNLGDDLLFGDVGNDWIHGGQGNDTVLGGFGDDT 304
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/261 (16%), Positives = 78/261 (29%), Gaps = 9/261 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
S I S + + D G G ++ + + +G
Sbjct: 226 GSAFNDILSGSAVANLIFGGDGADLATGGAGNDTILGGAGSDSLYGNLGDDLLFGDVGND 285
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G V G D D+ V + +D AT V+ +++Q
Sbjct: 286 WIHGGQGNDTVLGGFGD---DTLAGGVGDDVVDGGDGIDTVEFQTATAGVTVDLSLQGQA 342
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + S + + G +L+D G N + I G
Sbjct: 343 QRISAEEGTDTLFSIENILGSRYDDRLLGDAGSNLID----GSAGNDTAMGQAGEDLIFG 398
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N ++ + +++VG +GND + G N++ +G+D +G G D
Sbjct: 399 GDGNDSLYGNQDNDTLVGGNGNDWLHGGQGNDLLVGDAGSDTLNGGVGDDVLV--GGQGF 456
Query: 316 YKIYRFENAIIVYDANEHKQD 336
+ A + D
Sbjct: 457 DLLTGGTGADTFVFGSLDSAD 477
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/386 (12%), Positives = 96/386 (24%), Gaps = 57/386 (14%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
F +T + NG + + D G G ++ + +
Sbjct: 29 FNDTLMGGAGNDSLYGNGDDDRLYVNEGNDSLYGEEGNDWLHGGQGDDLVVGGDGNDTLA 88
Query: 130 HALGLMHPGSYNGGYPVYGVDND---------------------YENDSFLTSVMSYFMP 168
LG G + + + ++
Sbjct: 89 GGLGNDTLQGGAGNDTASYETATEGVTVSLALQGEGQFVNAQEGNDPLTSIENLTGSNHD 148
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF-------IQT 221
+ D + +D++ G GN+I Q
Sbjct: 149 DTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATGGVTVNLARDGQAQI 208
Query: 222 IYDSGGDD-----------LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
I G D + L G + + G N TI +S
Sbjct: 209 IGADQGTDVLSSIEGVIGSAFNDILSGSAVANLIFGGDGADLATGGAGNDTILGGAGSDS 268
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL------------------DTFFYYAP 312
+ G+ G+D++ G+ N+ GND G G DT +
Sbjct: 269 LYGNLGDDLLFGDVGNDWIHGGQGNDTVLGGFGDDTLAGGVGDDVVDGGDGIDTVEFQTA 328
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + E D L +E + + + ++++ +A + +
Sbjct: 329 TAGVTVDLSLQGQAQRISAEEGTDTLFSIENILGSRYDDRLLGDAGSNLIDGSAGNDTAM 388
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDIT 398
G+D+ ++ D
Sbjct: 389 GQAGEDLIFGGDGNDSLYGNQDNDTL 414
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/305 (13%), Positives = 72/305 (23%), Gaps = 33/305 (10%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + ++GS G DV+ G N+ +GND G+ D + +
Sbjct: 3 GLNLEGTDGADLLIGSRGADVISGRMFNDTLMGGAGNDSLYGNGDDDRLYVNE--GNDSL 60
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL---IQVI 375
Y E ++ + D L+ A +
Sbjct: 61 YGEEGNDWLHGGQGDD--------LVVGGDGNDTLAGGLGNDTLQGGAGNDTASYETATE 112
Query: 376 GQDVFESMKHFYEF-GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G V +++ +F EG D GS D G
Sbjct: 113 GVTVSLALQGEGQFVNAQEGNDPLTSIENLTGSNHD------------DTLIGDEGDNVL 160
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
L A ++ L+ + + +G+ +
Sbjct: 161 SGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATGGVTVNLARDGQAQIIGADQGTDVLSS 220
Query: 495 LRNVFGSDRGAAARH-------YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
+ V GS + G + A + L D
Sbjct: 221 IEGVIGSAFNDILSGSAVANLIFGGDGADLATGGAGNDTILGGAGSDSLYGNLGDDLLFG 280
Query: 548 QAGKD 552
G D
Sbjct: 281 DVGND 285
>gi|294678187|ref|YP_003578802.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294477007|gb|ADE86395.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 622
Score = 91.8 bits (226), Expect = 4e-16, Method: Composition-based stats.
Identities = 73/442 (16%), Positives = 120/442 (27%), Gaps = 35/442 (7%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+D + G I G N ++A +++ G++G D + G + +++
Sbjct: 170 IDNVIRGTTLADTLTGGALNDEILGLAGNDSLAGGEGNDTLNGAAGRDTLTGGTGDDMLS 229
Query: 291 ESS---GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ ND+ G +GLDT Y A + I A +A D L VE
Sbjct: 230 AGAMDVSNDLLLGGAGLDTADYRAVTAASGILIDLLAGSAVNAAHVGTDRLVGVENAIGG 289
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQD-----------VFESMKHFYE-----FGL 391
+ + ++ +DL G D + G
Sbjct: 290 AGADTILGTAGANRIDGGLGADDLRGGTGNDVYVVDRAGDRITEAAGGGTETVIATYSGH 349
Query: 392 SEG---RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+ G ++ D + +GS + L N + A G R L+
Sbjct: 350 TLGANLENLVLDGAVMVGSGNALDNRVTGNAAANLLA-GGLGNDLLRGMAGTDTLQGGDG 408
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
H+ L G D + + F T + R+ S
Sbjct: 409 HDTLDGGTGADRMQGGAGNDSYLVDESGDRIFETVTPSGTTDAGG--RDHVSSSVTINLD 466
Query: 509 HYITHGVKEGRNPDAFKALE--YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
Y E + A + +I AD G D I
Sbjct: 467 AYAGVRFVENVTLTGTYTINATGNALNNRIIGNDADNLLAGGLGND--VITTGLGNDVIV 524
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKA 626
FN L S D+ F + ++ F + A
Sbjct: 525 FNTALG-ASNVDMITDFYAGYDQIRLDDAI--FTTLARGTLADSAFVANEG---GRAMDA 578
Query: 627 DLSLSFDHKKVDLYTDYFGDGN 648
+ FD LY D G G
Sbjct: 579 GDRILFDTATARLYYDADGTGA 600
>gi|254673668|emb|CBA09254.1| putative calcium binding hemolysin protein [Neisseria meningitidis
alpha275]
Length = 1502
Score = 91.8 bits (226), Expect = 4e-16, Method: Composition-based stats.
Identities = 63/456 (13%), Positives = 121/456 (26%), Gaps = 66/456 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T +D + +G G G +N + G
Sbjct: 738 QNVGFGHNKNVSLYGNDGNDTLIGGVGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 797
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 798 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 857
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA+ K + +Y + +Y + GDDLL+ G N
Sbjct: 858 VLDVAIVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 913
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 914 IYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 973
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 974 SDTYVFGEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 1033
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 1034 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGD 1093
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D N + Y +G
Sbjct: 1094 DYLYGADGDDLLNGDAGND-----SIYSGNGNDTLNGGEGNDAL----YGYNGNDALNGG 1144
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ L ++ LI + G D +
Sbjct: 1145 EGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 1180
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 71/546 (13%), Positives = 134/546 (24%), Gaps = 75/546 (13%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D+ + + D G G + +N + G H +G + G +
Sbjct: 906 NGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGN 965
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ S +Y + D + Y DI+ + + G +
Sbjct: 966 DYLEGGSGSD-TYVFGEGFGQDTVYNYDYATGRKDII---------RFTDGITADMLTFT 1015
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
++ + + D G + + + + ++ + N + ++ +V
Sbjct: 1016 REGNHLLIKAKDGSGQVTV-------QSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLV 1068
Query: 273 --GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+D + + N G+D G+ G D + IY +
Sbjct: 1069 QQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDD--LLNGDAGNDSIYSGNGNDTL--N 1124
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE-- 388
D L + + L + LI G D E
Sbjct: 1125 GGEGNDALYGY------NGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV 1178
Query: 389 FGLSEGRDITFDSYLYLGS---------------------YDDLRNVFGSDRGAAARHYI 427
FG G+D ++ G L + Y
Sbjct: 1179 FGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYF 1238
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ D + + + G D YL
Sbjct: 1239 QNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLG--DDYL 1296
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
Y DDL N Y +G + AL ++ L +
Sbjct: 1297 YGADGDDLLN----GDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNG 1352
Query: 548 QAGKDHFS-------NFGYEEGRSITFNP--------DLYLTSYDDLWNVFGSDRSAAAQ 592
+ G D G + F + ++ D + G AA
Sbjct: 1353 EDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYHVDKNSDTMHFKG--FKAADV 1410
Query: 593 HYITHG 598
H+I G
Sbjct: 1411 HFIRSG 1416
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 78/253 (30%), Gaps = 11/253 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + T + +D + +G G G +N + G +
Sbjct: 1143 GGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 1202
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-----IVA 190
+ + ++ + D S Y + D VA
Sbjct: 1203 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 1262
Query: 191 VQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
K + +Y + +Y + GDDLL+ G N +
Sbjct: 1263 TVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDSIYSGN 1318
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G E N + + +++ G GND + G N+ +GND +G SG DT+
Sbjct: 1319 GNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV 1378
Query: 309 YYAPSYLYKIYRF 321
+ +Y +
Sbjct: 1379 FGEGFGQDTVYNY 1391
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 64/249 (25%), Gaps = 55/249 (22%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ GND +G SG DT+ + +Y ++
Sbjct: 743 GHNKNVSLYGNDGNDTLIGGVGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 802
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV- 354
+ V ++ ++ + F + + V
Sbjct: 803 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 862
Query: 355 --------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L S L +G D G D +Y G
Sbjct: 863 IVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLNGDAGND-----SIYSG 917
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ +D N + Y +G + L ++ LI + G
Sbjct: 918 NGNDTLNGGEGNDAL----YGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 973
Query: 467 KDHFSNFGC 475
D +
Sbjct: 974 SDTYVFGEG 982
>gi|114706018|ref|ZP_01438921.1| Glycerophosphoryl diester phosphodiesterase [Fulvimarina pelagi
HTCC2506]
gi|114538864|gb|EAU41985.1| Glycerophosphoryl diester phosphodiesterase [Fulvimarina pelagi
HTCC2506]
Length = 847
Score = 91.8 bits (226), Expect = 4e-16, Method: Composition-based stats.
Identities = 54/307 (17%), Positives = 95/307 (30%), Gaps = 24/307 (7%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
I ++ + G +G + + +P + + GGDD++ G N +
Sbjct: 324 IAHLRILPGTDNEIVGTD---GDDILLGTPLVDVMDGRGGDDII----YGRESNDVIYGG 376
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G + + TI + + G SGNDV+ G +++ + G+DV DG +G DT
Sbjct: 377 SGNDRLIGGDGDDTIYGGAGNDILFGGSGNDVLFGEDGDDILYGEEGDDVLDGGAGNDTL 436
Query: 308 F-------YYAPSYLYKIYRFENAIIVYDA-------NEHKQDFL---SDVERLRFADQC 350
+ S +Y ++ D L S +RLR D
Sbjct: 437 YGGAGNDALDGGSGDDALYGDAGDDVLEGGTGEDSLHGGLGNDVLLAGSGNDRLRGDDGD 496
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ + IL+ + L D + EG DI Y
Sbjct: 497 DHLYGDEGQDILDGGDGTDTLHGGANDDEIDGGSGNDRLYGDEGDDILEGGVGNDTLYGG 556
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ Y G D L A+ ++L + G D
Sbjct: 557 TGDDELDGDEGDDHLYGGGGDDILDGGDGTDTLYGGANDDELDGGAGNDRLYGGGGDDIL 616
Query: 471 SNFGCEE 477
++
Sbjct: 617 EGGVGDD 623
Score = 86.8 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/282 (16%), Positives = 83/282 (29%), Gaps = 21/282 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ TIY G+D+L + L G + I E + G N T+
Sbjct: 377 SGNDRLIGGDGDDTIYGGAGNDILFGGSGNDVLFGEDGDDILYGEEGDDVLDGGAGNDTL 436
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-- 320
+++ G SG+D + G++ ++V +G D G G D + + +
Sbjct: 437 YGGAGNDALDGGSGDDALYGDAGDDVLEGGTGEDSLHGGLGNDVLLAGSGNDRLRGDDGD 496
Query: 321 ---FENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + D L ++ + + + ILE + L
Sbjct: 497 DHLYGDEGQDILDGGDGTDTLHGGANDDEIDGGSGNDRLYGDEGDDILEGGVGNDTLYGG 556
Query: 375 IGQDVFESMKH----FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G D + + + G LY G+ DD + + Y G
Sbjct: 557 TGDDELDGDEGDDHLYGGGGDDILDGGDGTDTLYGGANDDELDGGAGNDRL----YGGGG 612
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
L ++ L + G DHF
Sbjct: 613 DDILEGGVGDDVLHGGEGNDALCDDAGIDYLYGGEGDDHFYA 654
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 57/359 (15%), Positives = 99/359 (27%), Gaps = 54/359 (15%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
G + D G G TI + G +G
Sbjct: 356 DGRGGDDIIYGRESNDVIYGGSGNDRLIGGDGDDTIYGGAGNDILFGGSGNDVLFGEDGD 415
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+YG + D D + Y + +D G A +YG G
Sbjct: 416 DILYGEEGDDVLDGGAGNDTLYGGAGNDALDGGSGDDA------------LYG----DAG 459
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+++ + +++ G+D+L + G N + + G E +
Sbjct: 460 DDV------LEGGTGEDSLHGGLGNDVL----LAGSGNDRLRGDDGDDHLYGDEGQDILD 509
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF--------------- 308
+++ G + +D + G S N+ + G+D+ +G G DT +
Sbjct: 510 GGDGTDTLHGGANDDEIDGGSGNDRLYGDEGDDILEGGVGNDTLYGGTGDDELDGDEGDD 569
Query: 309 --YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
Y + AN+ + D + +RL +L
Sbjct: 570 HLYGGGGDDILDGGDGTDTLYGGANDDELDGGAGNDRLYGGGGDDILEGGVGDDVLHGGE 629
Query: 367 SYEDLIQVIGQDVFESMKHFYEFG-----------LSEGRDITFDSYLYLGSYDDLRNV 414
+ L G D + F EG D L L S DL N
Sbjct: 630 GNDALCDDAGIDYLYGGEGDDHFYAISDGVVDEYRGGEGSDTLDLGDLILDSLIDLPNG 688
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 41/221 (18%), Gaps = 6/221 (2%)
Query: 331 NEHKQDFLSD---VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D L V+ + + ++ + + LI G D
Sbjct: 339 GTDGDDILLGTPLVDVMDGRGGDDIIYGRESNDVIYGGSGNDRLIGGDGDDTIYGGAGND 398
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G D+ F Y + + Y G AL A
Sbjct: 399 ILFGGSGNDVLFGEDGDDILYGEEGDDVLDGGAGNDTLYGGAGNDALDGGSGDDALYGDA 458
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ L + +G D G Y D
Sbjct: 459 GDDVLEGGTGEDSLHGGLGNDVLLAG---SGNDRLRGDDGDDHLYGDEGQDILDGGDGTD 515
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
+ E L + L +
Sbjct: 516 TLHGGANDDEIDGGSGNDRLYGDEGDDILEGGVGNDTLYGG 556
>gi|304394439|ref|ZP_07376362.1| hemolysin-type calcium-binding region [Ahrensia sp. R2A130]
gi|303293879|gb|EFL88256.1| hemolysin-type calcium-binding region [Ahrensia sp. R2A130]
Length = 5627
Score = 91.8 bits (226), Expect = 4e-16, Method: Composition-based stats.
Identities = 55/353 (15%), Positives = 92/353 (26%), Gaps = 37/353 (10%)
Query: 75 IHSDIKFI---SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
D F N + D+ D G G + + E+
Sbjct: 3090 YGQDGNFTADLGGGNDLYDVTKADTGIDTVDGGAGNDTIFTGAGDDILSGGDGDDELSGE 3149
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G G V L + + + GY + +
Sbjct: 3150 AGADVIDGGAGSDTVSYRYASSGVAVLLDDTDANGVAGVFTNTTAGGYLSDAAGDTFTDI 3209
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ + G+ + + T GDD D + L
Sbjct: 3210 ENVVGS----------RFDDVVFGGAAAGTFELLDGDDRFDND---SAVSVTVLAGGGND 3256
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G TI + V G +G+D++ + ++V + GND DG +G DT Y
Sbjct: 3257 IVYGGAGVSTIEGGAGNDFVYGEAGDDILNLGTGDDVTSGNEGNDTIDGGAGSDTAIYLG 3316
Query: 312 PSYLYKIYRF-ENAIIVYD---ANEHKQDFLSDVERLRFADQCIDSV------------- 354
Y I +N+I + D + D L +VE FAD I
Sbjct: 3317 NRADYTITNNPDNSITIVDNRPGSPDGTDILRNVEFGEFADGTIAFGSNSSLIIGTPSAD 3376
Query: 355 ----NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + + G D +G D +
Sbjct: 3377 AGLTGSGSAQYIYGQGEADAISGGGGNDALHGQDGSDTISGGDGDDTILGDRV 3429
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 71/513 (13%), Positives = 128/513 (24%), Gaps = 41/513 (7%)
Query: 63 SKVV-DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
S V LTF + D + + + I D G I
Sbjct: 2927 SDVAESLTFTTATTFQD------DGVAELSIIGSNDADTFIGNYGDDNIDGRFGNDVIYG 2980
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
+ + LG NG + G + L + + Y
Sbjct: 2981 RSGSDTLTGELGDDQLFGGNGDDILRGEA----ENDLLEGGAGADVHDGGSGFDTVSYAD 3036
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+ D++ G G+ ++ + + G D D
Sbjct: 3037 ASVGVDVLFSDSDTGGLNGAYVSDTAGGKTGIASGDTFTLVEAVVGSDHNDRIYGQDGNF 3096
Query: 242 YIDLNTES--WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
DL + + T+ +++ +G+D++ G ++ +G DV D
Sbjct: 3097 TADLGGGNDLYDVTKADTGIDTVDGGAGNDTIFTGAGDDILSGGDGDDELSGEAGADVID 3156
Query: 300 GSSGLDTFFYYAPSYLYKIY-----------RFENAIIVYDANEHKQDFLSDVERLRFAD 348
G +G DT Y S + F N ++ D +D+E + +
Sbjct: 3157 GGAGSDTVSYRYASSGVAVLLDDTDANGVAGVFTNTTAGGYLSDAAGDTFTDIENVVGSR 3216
Query: 349 QCIDSVNVKQRSILEYTASYE----------DLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
E + ++ G D+ G D
Sbjct: 3217 FDDVVFGGAAAGTFELLDGDDRFDNDSAVSVTVLAGGGNDIVYGGAGVSTIEGGAGNDFV 3276
Query: 399 F----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
+ D L LG+ DD+ + + + G D S + N
Sbjct: 3277 YGEAGDDILNLGTGDDVTSGNEGNDTIDGGAGSDTAIYLGNRADYTITNNPDNSITIVDN 3336
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ F F + F S L + + G+A Y
Sbjct: 3337 RPGSPDGTDILRNVEFGEFADG---TIAFGSNSSLIIGTPSADAGLTGSGSAQYIYGQGE 3393
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
AL + + D L
Sbjct: 3394 ADAISGGGGNDALHGQDGSDTISGGDGDDTILG 3426
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 70/221 (31%), Gaps = 9/221 (4%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+ + + D D S +S + + G + + A +
Sbjct: 5196 DNDRSFSITFEDADGNVSLPSISTISLVDNDRATNNMINGSSGNDVALNGTAADDLIQGL 5255
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSI 253
G+ + + I G+D + D T+ G N + ++ +I
Sbjct: 5256 GGNDTIDGLDGDDNLVGGSGNDIINGGQGNDRILGGDGDDTITAGDGNDVVYGEDNNDTI 5315
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + ++++G G D + G + N+ +G D+ +G G D Y
Sbjct: 5316 TGGLGADVLHGGNGDDTIMGGDGADHLDGFAGNDTLTGGAGYDIIEGGGGNDIAIYSGNQ 5375
Query: 314 YLYKIYRFENAIIVYD----ANEHKQDFLSDVERLRFADQC 350
Y + + + D + +VE RFAD
Sbjct: 5376 ADYTVMDNGDGSHTISDNRAGSPDGVDIVRNVEIFRFADGD 5416
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 80/651 (12%), Positives = 158/651 (24%), Gaps = 71/651 (10%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSR-------YFMEINFDKADVWRYGIG 115
S V+ + + D S D G G
Sbjct: 4548 SAVISVMVRTQTTAGDDVLSGGLGDDALFGGGGSDSLFGEQDNDNLFGGADDDDLFGGAG 4607
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
+ + G +G V + D L S + +
Sbjct: 4608 DDLLNGGTGNDILDGGAGADSFDGASGTDRVTYQTSATGVDVLLESTGPTGDVWGAFNNT 4667
Query: 176 S-FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ GY + D +++ + G+ + + + GGDD ++
Sbjct: 4668 AAGGYSGDALGDDFTSIEALSGSE----------FGDRVFGTSSGMDVDLLGGDDDFSVS 4717
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ + I + + T +++ G +G+D + G + G
Sbjct: 4718 AFSTAIDTV-TGGAGDDRIFTGGGDDFLYGSTGNDTLDGGAGSDELYGMENRDTLNGGQG 4776
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK-QDFLSDVERLRFADQCIDS 353
+D G + DT +Y + + S + L D
Sbjct: 4777 DDFLYGGAAADTL--DGGQGSDTLYGESGIDTLMGGANDDFLNGGSGNDILNGGDGSDIL 4834
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+L +DL G D G D Y S +
Sbjct: 4835 YGGSNNDVLSGGNGNDDLFGESGNDRLRGDAGNDFMDGGFGTDT----ADYSASGAGVVA 4890
Query: 414 VFGSDRGAAARHYITH-------GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+F + GA + T+ G G + + + E + + + + G
Sbjct: 4891 IFSNTDGAGIQGNFTNTASGGYQGDALGDSYTSIEVFEGTSFDDQVWGRADSFTANLGAG 4950
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
D + N + + D + G + +G
Sbjct: 4951 DDIYENGATGSDNVSGEAGNDIIVTGGDADLINGGAGDDRLQGGGGDDNIDGDADTDTAV 5010
Query: 527 LEYIA---SHEDLINAF-------ADAPDLVQAGKDHFSNFG------YEEGRSITFN-- 568
S DL A F F + E + +
Sbjct: 5011 YSGNRADYSINDLGFALQVVDNRPGSPDGTDVLFNVEFIEFANGTIDPFNEADTPQLDLN 5070
Query: 569 --------PDLYLTSYDDLWNVFGSDRSAAAQHY-------ITHGMKEG-----RALGIS 608
LY + D + + + + G+ E + G
Sbjct: 5071 DNAVGRGHETLYSSLMPDDAKFVAPNFTLSDLQENITTMTIVASGITEASFEWFQVGGSG 5130
Query: 609 GMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHD 659
G +L ++ + + + L G GN+ D++ S+ D
Sbjct: 5131 GGVRMDTDSLGTQALTSVSVDVIYTSSTNTLVITKTGGGNFTDAEAQSLLD 5181
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 55/382 (14%), Positives = 99/382 (25%), Gaps = 37/382 (9%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
NIY +V + + T + G L + +I +I G N I
Sbjct: 2923 NIYVSDVAESLTFTTATTFQDDGVAELSIIGSNDADTFI--GNYGDDNIDGRFGNDVIYG 2980
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ +++ G G+D + G + +++ + ND+ +G +G D +
Sbjct: 2981 RSGSDTLTGELGDDQLFGGNGDDILRGEAENDLLEGGAGADVHDGGSGFDTVSYADASVG 3040
Query: 325 IIVYDANEH--------------------KQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ V ++ D + VE + +D +
Sbjct: 3041 VDVLFSDSDTGGLNGAYVSDTAGGKTGIASGDTFTLVEAVVGSDHNDRIYGQDGNFTADL 3100
Query: 365 TASY---EDLIQVIGQDVFESMKHFYEFGLSEGRDI----TFDSYLYLGSYDDLRNVFGS 417
+ G D + G DI D L + D+ +
Sbjct: 3101 GGGNDLYDVTKADTGIDTVDGGAGNDTIFTGAGDDILSGGDGDDELSGEAGADVIDGGAG 3160
Query: 418 DRGAAARH-------YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ R+ + G + + F D ++V D
Sbjct: 3161 SDTVSYRYASSGVAVLLDDTDANGVAGVFTNTTAGGYLSDAAGDTFTDIENVVGSRFDDV 3220
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
G G F D D +V G Y GV +
Sbjct: 3221 VFGGAAAGTFELLDGDD-RFDNDSAVSVTVLAGGGNDIVYGGAGVSTIEGGAGNDFVYGE 3279
Query: 531 ASHEDLINAFADAPDLVQAGKD 552
A + L D G D
Sbjct: 3280 AGDDILNLGTGDDVTSGNEGND 3301
Score = 47.1 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 21/164 (12%), Positives = 38/164 (23%), Gaps = 26/164 (15%)
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII----VYDANEHKQDFLSDVERLRFAD 348
+ +D G G DT + Y I + + D L+ ++ L FAD
Sbjct: 3943 ADDDTLIGGLGSDTAVFSGNQADYTITDLGGGQVEVRDDRVGSPDGTDTLTGIDFLDFAD 4002
Query: 349 QC------------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
Q S + + +
Sbjct: 4003 GPIPTPVTPPQPPLFRQGTPNVDAFATQSEFTYGQGSDDTITGDSADNSIFGQDGGDTIV 4062
Query: 391 LSEGRDITFDSYLY----LGSYDDLRNVFGSDRGAAARHYITHG 430
G D + +G+ + D+G + G
Sbjct: 4063 GGAGNDTLVGDRISRIDAVGTQQTINQTTAGDQGGPLTVSLADG 4106
Score = 42.1 bits (97), Expect = 0.32, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 33/133 (24%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
L + ++ ++L+ G D+ + +G D
Sbjct: 5242 ALNGTAADDLIQGLGGNDTIDGLDGDDNLVGGSGNDIINGGQGNDRILGGDGDDTITAGD 5301
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
Y + N + A + +G D L+ A ++ L
Sbjct: 5302 GNDVVYGEDNNDTITGGLGADVLHGGNGDDTIMGGDGADHLDGFAGNDTLTGGAGYDIIE 5361
Query: 463 VQVGKDHFSNFGC 475
G D G
Sbjct: 5362 GGGGNDIAIYSGN 5374
Score = 39.4 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 67/245 (27%), Gaps = 12/245 (4%)
Query: 57 WALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK 116
A G S TF + +F G + E+
Sbjct: 3193 TAGGYLSDAAGDTFTDIENVVGSRFDDVVFGGAAAGTF------ELLDGDDRFDNDSAVS 3246
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
T+L+ + G+ G VYG D + ++ + +D
Sbjct: 3247 VTVLAGGGNDIVYGGAGVSTIEGGAGNDFVYGEAGDDILNLGTGDDVTSGNEGNDTIDGG 3306
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-LTL 235
G + + + N+I ++ + + + + D
Sbjct: 3307 AGSDTAIYLGNRAD-----YTITNNPDNSITIVDNRPGSPDGTDILRNVEFGEFADGTIA 3361
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G + I + + + G I +++ G GND + G ++ G+
Sbjct: 3362 FGSNSSLIIGTPSADAGLTGSGSAQYIYGQGEADAISGGGGNDALHGQDGSDTISGGDGD 3421
Query: 296 DVFDG 300
D G
Sbjct: 3422 DTILG 3426
>gi|125717928|ref|YP_001035061.1| calcium binding hemolysin-like protein [Streptococcus sanguinis SK36]
gi|125497845|gb|ABN44511.1| Calcium binding hemolysin-like protein, putative [Streptococcus
sanguinis SK36]
Length = 1477
Score = 91.4 bits (225), Expect = 4e-16, Method: Composition-based stats.
Identities = 63/551 (11%), Positives = 123/551 (22%), Gaps = 96/551 (17%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
+G + D + + D G G T + ++GH S N G
Sbjct: 784 SGGDDNVQGDKQNNILEGGSGNDKLYGGAGDDTYIF-----DLGHG---KDTISDNDGLS 835
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
S + + G T A Y K +
Sbjct: 836 TIRFGAGIALADLQVSHPVNDSWSAVLTNTKTGDSITFSNFRFSA---SYRNLKLVFSDG 892
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +T+Y + + L + +I N T+
Sbjct: 893 TELGVSDE--GSPFRTLYGTSESEYLSSPINNL-------------TIYAGAGNDTLNGS 937
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + + G G+D++ G+S N++ SGND G +G DT+ + I +
Sbjct: 938 SGSDRLYGDEGDDLLEGDSGNDLLEGGSGNDKLYGGAGDDTYIFDLGHGKDTISDNDGLS 997
Query: 326 IVYDAN-------------------------EHKQDFLSDVER--------LRFADQC-- 350
+ S+ L F+D
Sbjct: 998 TIRFGAGIALADLQVSHPVNDSWSAVLTNTKTGDSITFSNFRFSASYRNLKLVFSDGTEL 1057
Query: 351 ---------------------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ L ++ + L G D+ E
Sbjct: 1058 GVSDEGSPFRTLYGTSESEYLSSPINNLTIYAGAGNDTLNGSSGSDRLYGDEGDDLLEGD 1117
Query: 384 KHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
G D + D + +D + R + + +
Sbjct: 1118 SGNDLLEGGSGNDKLYGGAGDDTYIFDLGHGKDTISDNDGLSTIRFGAGIALADLQVSHP 1177
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS--YLYLGSYDDLRN 497
+ +G + + Y +
Sbjct: 1178 VNDSWSAVLTNTKTGDSITFSNFRFSASYRNLKLVFSDGTELGVSDEGSPFRTLYGTSES 1237
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+ S Y G L +++L + +G D +
Sbjct: 1238 EYLSSPINNLTIYAGAGNDTLNGSSGSDKLYGDKGNDELNGGDGNDLLDGGSGND--KLY 1295
Query: 558 GYEEGRSITFN 568
G + F+
Sbjct: 1296 GGAGDDTYIFD 1306
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/245 (16%), Positives = 76/245 (31%), Gaps = 8/245 (3%)
Query: 91 TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD 150
T + +D G + + + G G Y D
Sbjct: 1086 TIYAGAGNDTLNGSSGSDRLYGDEGDDLLEGDSGNDLLEGGSGNDKLYGGA-GDDTYIFD 1144
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
+ D+ + + + + + + P+ AV G++I
Sbjct: 1145 LGHGKDTISDNDGLSTIRFGAGIALADLQVSHPVNDSWSAVL-----TNTKTGDSITFSN 1199
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ S + S G + L ++ G + +ES + N+TI ++
Sbjct: 1200 FRFSASYRNLKLVFSDGTE-LGVSDEGSPFRTLYGTSESE-YLSSPINNLTIYAGAGNDT 1257
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ GSSG+D + G+ N+ GND+ DG SG D + A Y + D
Sbjct: 1258 LNGSSGSDKLYGDKGNDELNGGDGNDLLDGGSGNDKLYGGAGDDTYIFDLGHGKDTISDY 1317
Query: 331 NEHKQ 335
Sbjct: 1318 EGLST 1322
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/370 (12%), Positives = 88/370 (23%), Gaps = 78/370 (21%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V+ S G+D V G+ NN+ SGND G +G DT+ + I + +
Sbjct: 781 VMASGGDDNVQGDKQNNILEGGSGNDKLYGGAGDDTYIFDLGHGKDTISDNDGLSTIRFG 840
Query: 331 N-------------------------EHKQDFLSDVER--------LRFADQC------- 350
S+ L F+D
Sbjct: 841 AGIALADLQVSHPVNDSWSAVLTNTKTGDSITFSNFRFSASYRNLKLVFSDGTELGVSDE 900
Query: 351 ----------------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ L ++ + L G D+ E
Sbjct: 901 GSPFRTLYGTSESEYLSSPINNLTIYAGAGNDTLNGSSGSDRLYGDEGDDLLEGDSGNDL 960
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRN-VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G D LY G+ DD G + + + ++ G
Sbjct: 961 LEGGSGND-----KLYGGAGDDTYIFDLGHGKDTISDNDGLSTIRFGAGIALADLQVSHP 1015
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
++ + + +F + F D + F + G +
Sbjct: 1016 VNDSWSAVLTNTKTGDSITFSNFRFSASYRNLKLVFSD-GTELGVSDEGSPFRTLYGTSE 1074
Query: 508 RHYITHGVKEG--RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS-------NFG 558
Y++ + L + + L D +G D +G
Sbjct: 1075 SEYLSSPINNLTIYAGAGNDTLNGSSGSDRLYGDEGDDLLEGDSGNDLLEGGSGNDKLYG 1134
Query: 559 YEEGRSITFN 568
+ F+
Sbjct: 1135 GAGDDTYIFD 1144
>gi|315499282|ref|YP_004088086.1| glycosyl transferase family 2 [Asticcacaulis excentricus CB 48]
gi|315417294|gb|ADU13935.1| glycosyl transferase family 2 [Asticcacaulis excentricus CB 48]
Length = 1138
Score = 91.4 bits (225), Expect = 4e-16, Method: Composition-based stats.
Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 385 HFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-----P 437
H+ G + F++++YL +Y D+ HYI G EGR+
Sbjct: 184 HYVVNGAENQLNPNSAFNTHVYLHNYPDVLRA----GINPFVHYIQSGRFEGRSSAPLLD 239
Query: 438 DAFKALEYI-ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL--GSYDD 494
DAF +++ + A D A + +V D EE + T S +
Sbjct: 240 DAFISIQPLHAETRDAAQAVTQPSESTEVQTD----ASNEEPQLETLPQTALSEPLSNEA 295
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF-ADAPDLVQAGKDH 553
+ +D + R I +G+K R D +++++ I + AF A+ L K H
Sbjct: 296 SKGTLINDIHWSVRTAIKYGIK--RAVDGYRSVQVIRRQGNFNQAFYAEQVGLRLRPKHH 353
Query: 554 FSNFGYEEGR-----SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
++ E R S F+ + YLT YDD+ HY+ G++E R + S
Sbjct: 354 VWHYVIEGSRCGFDPSPNFSAEKYLTFYDDVKA----SGREPYAHYLKFGIRENRTIVPS 409
Query: 609 GMQFK 613
F
Sbjct: 410 QSPFA 414
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 43/132 (32%), Gaps = 14/132 (10%)
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDL 571
GV R F Y + L + ++ L H+ G E + FN +
Sbjct: 153 GVIALRASGQFDERYYKSQ---LNFSTRNSNLLW-----HYVVNGAENQLNPNSAFNTHV 204
Query: 572 YLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLS 631
YL +Y D+ HYI G EGR+ + A +++
Sbjct: 205 YLHNYPDVLRA----GINPFVHYIQSGRFEGRSSAPLLDDAFISIQPLHAETRDAAQAVT 260
Query: 632 FDHKKVDLYTDY 643
+ ++ TD
Sbjct: 261 QPSESTEVQTDA 272
>gi|148259629|ref|YP_001233756.1| glycosyl transferase, group 1 [Acidiphilium cryptum JF-5]
gi|146401310|gb|ABQ29837.1| glycosyl transferase, group 1 [Acidiphilium cryptum JF-5]
Length = 1247
Score = 91.4 bits (225), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 71/218 (32%), Gaps = 39/218 (17%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD Y D+ + G + G P+ F Y+A + D+ +
Sbjct: 25 LFDPGHYALQAQDMPA-----GTDPLTDFCRRGWRAGHRPNPYFDPAFYLARNPDIAASG 79
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
A+ H+ +FG EGR + F + Y +Y D A +++
Sbjct: 80 ANP-------LRHYIDFGDREGRDPSPLFHAGWYRETYG------IPDGANALADFLSRR 126
Query: 515 VKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDL 571
+P F Y+ ++ D+ A P +HF FG E R S F+
Sbjct: 127 RTGKVSPVPLFDPQWYLDNNPDVAAA-GSDP------FEHFCAFGAAERRDPSPDFDIGF 179
Query: 572 YLTSYDDLWNVFGSDRSAAAQHYITH---GMKEGRALG 606
Y Y D HY+ H G R G
Sbjct: 180 YAARYADEIA-----GGNPFLHYLAHRGGGFHPRRPAG 212
Score = 84.5 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/237 (18%), Positives = 62/237 (26%), Gaps = 45/237 (18%)
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D D+ +R + + + G D F G
Sbjct: 7 PAEDPDLAGDIAAIRPS--------GLFDPGHYALQAQDM---PAGTDPL---TDFCRRG 52
Query: 391 LSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIA 447
G + FD YL D+ RHYI G +EGR+P F A Y
Sbjct: 53 WRAGHRPNPYFDPAFYLARNPDIAAS----GANPLRHYIDFGDREGRDPSPLFHAGWYRE 108
Query: 448 SHEDLINAFADAPDLVQVGKDHFSN--FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
++ A F + + FD YL + D+
Sbjct: 109 TYGIPDGA---------NALADFLSRRRTGKVSPVPLFDPQWYLDNNPDVAAAG----SD 155
Query: 506 AARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
H+ G E R+P F Y A + D I H+
Sbjct: 156 PFEHFCAFGAAERRDPSPDFDIGFYAARYADEIA--------GGNPFLHYLAHRGGG 204
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 53/183 (28%), Gaps = 22/183 (12%)
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
A F G G FD YL D+ +
Sbjct: 27 DPGHYALQAQDMPAGTDPLTDFCRRGWRAGHRPNPYFDPAFYLARNPDIAASGAN----P 82
Query: 507 ARHYITHGVKEGRNPDA-FKALEYIASH--EDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
RHYI G +EGR+P F A Y ++ D NA AD + GK
Sbjct: 83 LRHYIDFGDREGRDPSPLFHAGWYRETYGIPDGANALADFLSRRRTGKV---------SP 133
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
F+P YL + D+ S +H+ G E R +++
Sbjct: 134 VPLFDPQWYLDNNPDVAAA----GSDPFEHFCAFGAAERRDPSPDFDIGFYAARYADEIA 189
Query: 624 DKA 626
Sbjct: 190 GGN 192
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 57/172 (33%), Gaps = 30/172 (17%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFG 416
Y A D I G + +H+ +FG EGRD F + Y +Y
Sbjct: 63 FDPAFYLARNPD-IAASGANPL---RHYIDFGDREGRDPSPLFHAGWYRETYGIP----- 113
Query: 417 SDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
D A +++ +P F Y+ ++ D+ A +D +HF FG
Sbjct: 114 -DGANALADFLSRRRTGKVSPVPLFDPQWYLDNNPDVAAAGSDP-------FEHFCAFGA 165
Query: 476 EEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH---GVKEGRNPD 522
E R FD Y Y D G HY+ H G R
Sbjct: 166 AERRDPSPDFDIGFYAARYADEIA-----GGNPFLHYLAHRGGGFHPRRPAG 212
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 30/87 (34%), Gaps = 14/87 (16%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSY 576
R F Y +D+ P F G+ G + F+P YL
Sbjct: 21 RPSGLFDPGHYALQAQDMPA--GTDPLTD------FCRRGWRAGHRPNPYFDPAFYLARN 72
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGR 603
D+ + + +HYI G +EGR
Sbjct: 73 PDI----AASGANPLRHYIDFGDREGR 95
>gi|254504843|ref|ZP_05116994.1| hypothetical protein SADFL11_4882 [Labrenzia alexandrii DFL-11]
gi|222440914|gb|EEE47593.1| hypothetical protein SADFL11_4882 [Labrenzia alexandrii DFL-11]
Length = 332
Score = 91.4 bits (225), Expect = 5e-16, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 26/155 (16%)
Query: 464 QVGKDHFSNFGCEEG--------RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
G +H G EG D YL DD+ HY T G
Sbjct: 192 PEGTNHCEETGLVEGSGIRTSAVLHAGVDEVFYLQENDDVAAAMLDGS----AHYNTFGW 247
Query: 516 KEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLY 572
+EGR+P+ F Y+A + D+ A + H+ + G+ EGRS + F+ D Y
Sbjct: 248 REGRDPNGWFDTDWYLAQNTDVAAADINP-------LTHYLDHGWREGRSPSEYFDGDRY 300
Query: 573 LTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
LT+ D+ N H + G+ EGR G+
Sbjct: 301 LTANTDVANA----GIDPLSHMLMFGLAEGRDWGL 331
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 56/164 (34%), Gaps = 18/164 (10%)
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N + + + + +V + Y +D+ + +
Sbjct: 183 GFTAFNFTNPEGTNHCEETGLVEGSGIRTSAVLHAGVDEVFYLQENDDVAAAM----LDG 238
Query: 383 MKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA- 439
H+ FG EGRD FD+ YL D+ HY+ HG +EGR+P
Sbjct: 239 SAHYNTFGWREGRDPNGWFDTDWYLAQNTDVAAA----DINPLTHYLDHGWREGRSPSEY 294
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
F Y+ ++ D+ NA D H FG EGR
Sbjct: 295 FDGDRYLTANTDVANAGIDP-------LSHMLMFGLAEGRDWGL 331
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 49/143 (34%), Gaps = 24/143 (16%)
Query: 497 NVFGSDRGAAARHYITHGVKEGRNP-------DAFKALEYIASHEDLINAFADAPDLVQA 549
F H G+ EG + Y+ ++D+ A D
Sbjct: 185 TAFNFTNPEGTNHCEETGLVEGSGIRTSAVLHAGVDEVFYLQENDDVAAAMLD------- 237
Query: 550 GKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
G H++ FG+ EGR F+ D YL D+ HY+ HG +EGR
Sbjct: 238 GSAHYNTFGWREGRDPNGWFDTDWYLAQNTDVAAA----DINPLTHYLDHGWREGR---- 289
Query: 608 SGMQFKSVMNLSEKSRDKADLSL 630
S ++ + D A+ +
Sbjct: 290 SPSEYFDGDRYLTANTDVANAGI 312
>gi|326403402|ref|YP_004283483.1| putative glycosyltransferase [Acidiphilium multivorum AIU301]
gi|325050263|dbj|BAJ80601.1| putative glycosyltransferase [Acidiphilium multivorum AIU301]
Length = 1247
Score = 91.4 bits (225), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 71/218 (32%), Gaps = 39/218 (17%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD Y D+ + G + G P+ F Y+A + D+ +
Sbjct: 25 LFDPGHYALQAQDMPA-----GTDPLTDFCRRGWRAGHRPNPYFDPAFYLARNPDIAASG 79
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
A+ H+ +FG EGR + F + Y +Y D A +++
Sbjct: 80 ANP-------LRHYIDFGDREGRDPSPLFHAGWYRETYG------IPDGANAPADFLSRR 126
Query: 515 VKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDL 571
+P F Y+ ++ D+ A P +HF FG E R S F+
Sbjct: 127 RTGKVSPVPLFDPQWYLDNNPDVAAA-GSDP------FEHFCAFGAAERRDPSPDFDIGF 179
Query: 572 YLTSYDDLWNVFGSDRSAAAQHYITH---GMKEGRALG 606
Y Y D HY+ H G R G
Sbjct: 180 YAARYADEIA-----GGNPFLHYLAHRGGGFHPRRPAG 212
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 64/235 (27%), Gaps = 41/235 (17%)
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D D+ +R + + + G D F G
Sbjct: 7 PAEDPDLAGDIAAIRPS--------GLFDPGHYALQAQDM---PAGTDPL---TDFCRRG 52
Query: 391 LSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIA 447
G + FD YL D+ RHYI G +EGR+P F A Y
Sbjct: 53 WRAGHRPNPYFDPAFYLARNPDIAAS----GANPLRHYIDFGDREGRDPSPLFHAGWYRE 108
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
++ A A A L + + FD YL + D+
Sbjct: 109 TYGIPDGANAPADFLSRRR-------TGKVSPVPLFDPQWYLDNNPDVAAAG----SDPF 157
Query: 508 RHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
H+ G E R+P F Y A + D I H+
Sbjct: 158 EHFCAFGAAERRDPSPDFDIGFYAARYADEIA--------GGNPFLHYLAHRGGG 204
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 57/172 (33%), Gaps = 30/172 (17%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFG 416
Y A D I G + +H+ +FG EGRD F + Y +Y
Sbjct: 63 FDPAFYLARNPD-IAASGANPL---RHYIDFGDREGRDPSPLFHAGWYRETYGIP----- 113
Query: 417 SDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
D A +++ +P F Y+ ++ D+ A +D +HF FG
Sbjct: 114 -DGANAPADFLSRRRTGKVSPVPLFDPQWYLDNNPDVAAAGSDP-------FEHFCAFGA 165
Query: 476 EEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH---GVKEGRNPD 522
E R FD Y Y D G HY+ H G R
Sbjct: 166 AERRDPSPDFDIGFYAARYADEIA-----GGNPFLHYLAHRGGGFHPRRPAG 212
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 30/87 (34%), Gaps = 14/87 (16%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSY 576
R F Y +D+ P F G+ G + F+P YL
Sbjct: 21 RPSGLFDPGHYALQAQDMPA--GTDPLTD------FCRRGWRAGHRPNPYFDPAFYLARN 72
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGR 603
D+ + + +HYI G +EGR
Sbjct: 73 PDI----AASGANPLRHYIDFGDREGR 95
>gi|218529941|ref|YP_002420757.1| heme peroxidase [Methylobacterium chloromethanicum CM4]
gi|218522244|gb|ACK82829.1| Animal heme peroxidase [Methylobacterium chloromethanicum CM4]
Length = 3587
Score = 91.4 bits (225), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 66/193 (34%), Gaps = 8/193 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + G V N + G E + T+ + ++++G +GN+ + G + ++
Sbjct: 1888 DDDIEGEVGNDAIYAGSGDDRVDGGEGDDTLLGNDGADTLIGRTGNNTLDGGNDDDQLSG 1947
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----DANEHKQDFLSDVERLRFA 347
GND G +G DT Y P Y R +V A D L+ +E+++
Sbjct: 1948 GHGNDRLIGGAGTDTAIYSGPIAAYSFERNAQGEVVVSDNLGAEGDGVDTLTTIEQIQMG 2007
Query: 348 DQ----CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + + I+ TA L G D+ + G F
Sbjct: 2008 NDLTPYALVANGTAAVDIVVGTAGNNTLSGGAGNDLVFAGAGNDNVLWRTGDGRDFVDGG 2067
Query: 404 YLGSYDDLRNVFG 416
+ N G
Sbjct: 2068 AGTDSFRIMNGTG 2080
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 70/291 (24%), Gaps = 24/291 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ TI GDD + + G + + E + +
Sbjct: 3297 GDVLNGTAGADTILGLDGDDNI----LAGGGADVVRAGAGNDFVDAGEGRDVVFAGDGDD 3352
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
V+ G D+V G+ N+ +GND+ +G DT L+ + +
Sbjct: 3353 DVLSGGGADMVYGDGGNDRILAGAGNDLVTAGAGRDTVIGGEGDDLFVAETGDGDDTYWG 3412
Query: 330 ---ANEHKQDFL------SDVER---LRFADQCIDSVNVKQRSILEY------TASYEDL 371
D L +++ A + + R +L + +D+
Sbjct: 3413 DEMGGGLGSDTLDMSAITANIAVNLGTGLAGRGSATSTQSGRDVLWGVENVVTGSGNDDI 3472
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL--GSYDDLRNVFGSDRGAAARHYITH 429
+V + + + D+ G DL + A + +
Sbjct: 3473 TASDAANVMDGGEGSDTYRFGSAAAANGDTIEGFRPGDKIDLSAIDADAGLAGNQAFTLA 3532
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ D + +
Sbjct: 3533 TGAAFTGVGQLLVTQETRDDGDYVVVQGNTAGDASPEFKLAIKGNTAPTAA 3583
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/171 (11%), Positives = 53/171 (30%), Gaps = 9/171 (5%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ GND +I + ++ + +G+D + +G+D I + E
Sbjct: 1316 GTDGNDTIITDFGDDGIWGDAGDDRIEAGAGVDLV---NGGAGDDIITDSGDTGDFLKGE 1372
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D +++ ++ + + + + ++ G D +
Sbjct: 1373 DGNDVIAN------SNGIDILMGGRGKDAIFVGVDATEVFAGEGDDFVIGGDDADLLMGN 1426
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
EG D + + D +F + G + + ++ +
Sbjct: 1427 EGDDWMEGGGGFDTTAGDNSELFFNSAIKGHDVMFAGGDEHDFDGESGDDI 1477
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 26/89 (29%), Gaps = 2/89 (2%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S G N T + G + + G N+ +GND+ +G G DTF
Sbjct: 2233 DSFTGTALNRTFNGTAGDDIANG--ADTALFGIQPNDTMNGGAGNDILNGRGGNDTFIQV 2290
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ ++ +
Sbjct: 2291 STDGRDRVDGGAGTDTYQLNGAAGPETFR 2319
Score = 42.5 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 37/267 (13%), Positives = 62/267 (23%), Gaps = 34/267 (12%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
TFF + +I N N Q S D +++
Sbjct: 1826 TFFTPTGATGVEIRVVANWTSTVAGNTGLQQTASIQSAFVGTAAAEDITGSASPNVILGR 1885
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+D+ +G D + EG D + D L G++
Sbjct: 1886 DGDDDIEGEVGNDAIYAGSGDDRVDGGEGDDTLLGNDG----ADTLIGRTGNNTLDG--- 1938
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ L ++ LI + +S +G V D+
Sbjct: 1939 -----------GNDDDQLSGGHGNDRLIGGAGTDTAIYSGPIAAYSFERNAQGEVVVSDN 1987
Query: 486 YLYLGSYDDLRNVF-----GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
G D G+D A + A + L
Sbjct: 1988 LGAEGDGVDTLTTIEQIQMGNDLTPYALVANGTAAV--------DIVVGTAGNNTLSGGA 2039
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITF 567
+ AG D+ + G F
Sbjct: 2040 GNDLVFAGAGNDNVL---WRTGDGRDF 2063
>gi|325142593|gb|EGC64987.1| Iron-regulated protein frpC [Neisseria meningitidis 961-5945]
Length = 1629
Score = 91.0 bits (224), Expect = 5e-16, Method: Composition-based stats.
Identities = 75/501 (14%), Positives = 139/501 (27%), Gaps = 84/501 (16%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS-----HNALHEIGHAL 132
+ + + + I D G G T + + ++ +A
Sbjct: 1063 NGNDVLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYAT 1122
Query: 133 GLMHPGSYNGGYPVYGVDNDYEND---------SFLTSVMSYFMPQDSMMDASFGYCATP 183
G + G + E + S +V SYF S
Sbjct: 1123 GRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDN 1182
Query: 184 M-VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
V D+ V+K+ + + G++ Y+ +Y + GDDLL+ G
Sbjct: 1183 GKVLDVATVKKL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDA 1236
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
N + ++ G E N + + + + G GND + G N+ +GND +
Sbjct: 1237 GNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLE 1296
Query: 300 GSSGLDTFFYYAPSYLYKIYRFE------------------------------------- 322
G SG DT+ + +Y ++
Sbjct: 1297 GGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGS 1356
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQ 373
+ V ++ ++ + F + + V + L S L
Sbjct: 1357 GQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNG 1416
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+G D G D +Y G+ +D + + Y +G
Sbjct: 1417 GLGDDYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDV 1467
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+ L ++ LI + G D + EG ++
Sbjct: 1468 LNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG---EGFGQDTVYNYHVDKNS 1524
Query: 494 DLRNVFGSDRGAAARHYITHG 514
D AA H+I G
Sbjct: 1525 DTM--HFKGFKAADVHFIRSG 1543
Score = 89.5 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 62/456 (13%), Positives = 121/456 (26%), Gaps = 66/456 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 865 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 924
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 925 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 984
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 985 VLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 1040
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + + + G+ GND + G N+ +GND +G SG
Sbjct: 1041 IYSGNGNDTLDGGEGNDALYGYNGNDVLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 1100
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 1101 SDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 1160
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 1161 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGD 1220
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D + + Y +G
Sbjct: 1221 DYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDVLNGG 1271
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ L ++ LI + G D +
Sbjct: 1272 EGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 1307
>gi|264678901|ref|YP_003278808.1| DMSO reductase [Comamonas testosteroni CNB-2]
gi|262209414|gb|ACY33512.1| putative DMSO reductase [Comamonas testosteroni CNB-2]
Length = 490
Score = 91.0 bits (224), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 32/180 (17%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAF 456
FD YL +Y D++N A HY G +EGRNP+ F + Y+ + D+ +
Sbjct: 42 LFDKDWYLSTYGDVKNA----GIDPAEHYYYQGGREGRNPNYLFNSAYYLEDNPDVAASG 97
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ H+ FG EGR + FD Y + + + HYIT G
Sbjct: 98 KNP-------LIHYIEFGENEGRSPSVYFDPAYYKAQLKEKI-----NGESVLMHYITGG 145
Query: 515 VKE-GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI----TFNP 569
+ G NP F Y+ ++D+ +A P L H+ G+ E R +F+
Sbjct: 146 WRHYGPNP-FFDNRFYLDKYQDISDAN-SDPLL------HYITHGWREAREFHRVYSFDT 197
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 57/168 (33%), Gaps = 24/168 (14%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
Y ++Y D+ G D +H+Y G EGR+ F+S YL D+
Sbjct: 41 GLFDKDWYLSTYGDVKNA-GIDP---AEHYYYQGGREGRNPNYLFNSAYYLEDNPDVAAS 96
Query: 415 FGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
HYI G EGR+P F Y A + H+
Sbjct: 97 ----GKNPLIHYIEFGENEGRSPSVYFDPAYYKAQ--------LKEKINGESVLMHYITG 144
Query: 474 GCE-EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
G G FD+ YL Y D HYITHG +E R
Sbjct: 145 GWRHYGPNPFFDNRFYLDKYQD----ISDANSDPLLHYITHGWREARE 188
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 50/144 (34%), Gaps = 17/144 (11%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F Y++++ D+ NA P +H+ G EGR+ FN YL D+
Sbjct: 43 FDKDWYLSTYGDVKNA-GIDP------AEHYYYQGGREGRNPNYLFNSAYYLEDNPDV-- 93
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYT 641
+ HYI G EGR+ + + K + + L +
Sbjct: 94 --AASGKNPLIHYIEFGENEGRSPSVYFD--PAYYKAQLKEKINGESVLMHYITGGWRHY 149
Query: 642 --DYFGDGNYYDSDLYSMHDINHD 663
+ F D +Y + D N D
Sbjct: 150 GPNPFFDNRFYLDKYQDISDANSD 173
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/282 (18%), Positives = 84/282 (29%), Gaps = 47/282 (16%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TF 399
E + + Y D + G++ H+ EFG +EGR F
Sbjct: 64 EHYYYQGGREGRNPNYLFNSAYYLEDNPD-VAASGKNPLI---HYIEFGENEGRSPSVYF 119
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
D Y + + HYIT G + F Y+ ++D+ +A +D
Sbjct: 120 DPAYYKAQ-----LKEKINGESVLMHYITGGWRHYGPNPFFDNRFYLDKYQDISDANSDP 174
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
H+ G E R F +Y + +Y+ G K
Sbjct: 175 LL-------HYITHGWREARE--FHRVYSFDTYKQELTERLGELTEPLAYYLKVGRKSND 225
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG-YEEG-------RSITFNPDL 571
A A +D F + +L Q+ +HF E R+ F
Sbjct: 226 QLPKKNAPRV-AVGDD---GFRKSLELQQSAGEHFEESLIGSEAIAALSPVRTFAF---- 277
Query: 572 YL-TSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQF 612
YL Y ++ + G E R + + +F
Sbjct: 278 YLPQFYP----FKQNNE------WWGPGFTEWRNVTRAQPRF 309
>gi|149912995|ref|ZP_01901529.1| hypothetical protein RAZWK3B_03365 [Roseobacter sp. AzwK-3b]
gi|149813401|gb|EDM73227.1| hypothetical protein RAZWK3B_03365 [Roseobacter sp. AzwK-3b]
Length = 813
Score = 91.0 bits (224), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 76/242 (31%), Gaps = 13/242 (5%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D D+ L G + I+ I G N + + + G G+D +IG + +
Sbjct: 478 TDAPDVLLGGEGNDTIN-GAGGGDVITGMGGNDRLLGEAGADILRGGPGHDTLIGGTGAD 536
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRF 346
+ GND +G S +D F + + A +Y + + + + V+ +
Sbjct: 537 SLYGGDGNDSLEGLSSIDLLF--GEAGHDTLAGGIGADTLYGGSGNDRLLGNTGVDLIYG 594
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
D ++ A + +I G D SEG D
Sbjct: 595 GDGDDWISPGNGVDVVYGDAGNDTVIGRTGWDTLFGGDGDDSLLGSEG----QDDLYGEA 650
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
D L FG D Y G + LE + ++ L A + G
Sbjct: 651 GDDTLSGGFGFDFL-----YGGDGHDQLFENLGSDLLEGGSGNDSLFGATGNDTLRGGPG 705
Query: 467 KD 468
D
Sbjct: 706 HD 707
Score = 86.8 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 71/271 (26%), Gaps = 21/271 (7%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + G D L +L GG N S + G +
Sbjct: 503 TGMGGNDRLLGEAGADILRGGPGHDTLIGGTGADSLYGGDGNDSLEGLSSIDLLFGEAGH 562
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+A +++ G SGND ++GN+ ++ + G+D +G+D Y + +
Sbjct: 563 DTLAGGIGADTLYGGSGNDRLLGNTGVDLIYGGDGDDWISPGNGVD--VVYGDAGNDTVI 620
Query: 320 RFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLI---- 372
++ D L E L L ++ L
Sbjct: 621 GRTGWDTLFGG--DGDDSLLGSEGQDDLYGEAGDDTLSGGFGFDFLYGGDGHDQLFENLG 678
Query: 373 -----QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
G D G D+ S N A
Sbjct: 679 SDLLEGGSGNDSLFGATGNDTLRGGPGHDVIQGSQGLDVIEGGPGNDTMRGGSLADEFIF 738
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFAD 458
G D A + + L++ A+
Sbjct: 739 RRGDDRDAILDFEAAHDILMLDAALVDGPAN 769
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 51/349 (14%), Positives = 101/349 (28%), Gaps = 36/349 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + G + AD+ R G G T++ + G
Sbjct: 486 GGEGNDTINGAGGGDVITGMGGNDRLLGEAGADILRGGPGHDTLIGGTGADSLYGGDGND 545
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ ++G + + Y + + + G V IY
Sbjct: 546 SLEGLSSIDLLFGEAGHDTLAGGIGADTLYGGSGNDRLLGNTG------------VDLIY 593
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESW 250
G + + +Y G+D + TL GG + L +E
Sbjct: 594 GGD----------GDDWISPGNGVDVVYGDAGNDTVIGRTGWDTLFGGDGDDSLLGSEGQ 643
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + T++ + + G G+D + N +++ SGND G++G DT
Sbjct: 644 DDLYGEAGDDTLSGGFGFDFLYGGDGHDQLFENLGSDLLEGGSGNDSLFGATGNDTLR-- 701
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE- 369
I + ++ D + AD+ I + +IL++ A+++
Sbjct: 702 GGPGHDVIQGSQGLDVIEGGP--GNDTMRGG---SLADEFIFRRGDDRDAILDFEAAHDI 756
Query: 370 -DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L + + +T D L G
Sbjct: 757 LMLDAALVDGPANAQTVLDRHASFGDGTVTLDFGSGDIIEVTLYLGLGD 805
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 69/281 (24%), Gaps = 45/281 (16%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ A +V GND +G+ G D ++ A I+ D L
Sbjct: 474 LTTQTDAPDVLLGGEGNDTINGAGGGD--VITGMGGNDRLLGEAGADILRGGP--GHDTL 529
Query: 339 ---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ + L D + +L A ++ L IG D + G
Sbjct: 530 IGGTGADSLYGGDGNDSLEGLSSIDLLFGEAGHDTLAGGIGADTLYGGSGNDRLLGNTGV 589
Query: 396 DITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
D+ + D ++ G+ D+ + G D +L +D
Sbjct: 590 DLIYGGDGDDWISPGNGVDVVYGDAGNDTV----IGRTGWDTLFGGDGDDSLLGSEGQDD 645
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
L D FD +D L GSD
Sbjct: 646 LYGEAGDDTLSGGF----------------GFDFLYGGDGHDQLFENLGSDLLE------ 683
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+L ++ L G D
Sbjct: 684 --------GGSGNDSLFGATGNDTLRGGPGHDVIQGSQGLD 716
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/244 (12%), Positives = 54/244 (22%), Gaps = 14/244 (5%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + + ++ + + A + L A + L
Sbjct: 472 EFLTTQTDAPDVLLGGEGNDT--------INGAGGGDVITGMGGNDRLLGEAGADILRGG 523
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D +G D + + + + A Y G
Sbjct: 524 PGHDTLIGGTGADSLYGGDGNDSLEGLSSIDLLFGEAGHDTLAGGIGADTLYGGSGNDRL 583
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS--Y 492
+ + + G D + F LGS
Sbjct: 584 LGNTGVDLIYGGDGDDWISPGNGVDVVYGDAGNDTVIGRTGWDTLFGGDGDDSLLGSEGQ 643
Query: 493 DDLRNVFGSDRGAA----ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
DDL G D + Y G + LE + ++ L A +
Sbjct: 644 DDLYGEAGDDTLSGGFGFDFLYGGDGHDQLFENLGSDLLEGGSGNDSLFGATGNDTLRGG 703
Query: 549 AGKD 552
G D
Sbjct: 704 PGHD 707
Score = 42.1 bits (97), Expect = 0.32, Method: Composition-based stats.
Identities = 43/315 (13%), Positives = 72/315 (22%), Gaps = 34/315 (10%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E V+G+ G D + + + ++ G D G +G D F +I F
Sbjct: 351 EVVIGTEGADALGIGADGGLIWDGGGGDTLIGGAGADLFVLVQDGAPDEIRGFAPGQDRV 410
Query: 329 DANE---------HKQDFLSDVERLRFADQCIDSVNVKQRS------------------- 360
D ++ + LSD R+ + + +
Sbjct: 411 DLSDWEGLYSTLQIGLETLSDGARITYGADVLTLRTASGAAIGWREILETDMLGIVRIAP 470
Query: 361 ---ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ T + + L+ G D G D +
Sbjct: 471 PEFLTTQTDAPDVLLGGEGNDTINGAGGGDVITGMGGNDRLLGEAGADILRGGPGHDTLI 530
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
A Y G + L A H+ L G D +
Sbjct: 531 GGTGADSLYGGDGNDSLEGLSSIDLLFGEAGHDTLAGGIGADTLYGGSGNDRLLGNTGVD 590
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
+ + V+G G D +L +DL
Sbjct: 591 LIYGGDGDDWISPGNG-VDVVYGDAGND--TVIGRTGWDTLFGGDGDDSLLGSEGQDDLY 647
Query: 538 NAFADAPDLVQAGKD 552
D G D
Sbjct: 648 GEAGDDTLSGGFGFD 662
>gi|163744437|ref|ZP_02151797.1| Hemolysin-type calcium-binding protein [Oceanibulbus indolifex
HEL-45]
gi|161381255|gb|EDQ05664.1| Hemolysin-type calcium-binding protein [Oceanibulbus indolifex
HEL-45]
Length = 950
Score = 91.0 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 63/452 (13%), Positives = 100/452 (22%), Gaps = 61/452 (13%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + + D G G G
Sbjct: 255 GGDGADTLEGGACNDVLNGGAGNDVLDGGSGDDHLWDGAGDDYADGGAGDDIFYMGAGSD 314
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS--------- 186
G D + +D+ T
Sbjct: 315 TLHGGTGRDSFVASDG-FGSDTVDGGSGDGDHDYIDFRGHGQSVEVTFTGFEQGTASAGR 373
Query: 187 --------------------DIVAVQKIYGAPKGSLGNNIY-----------KIEVQQKD 215
D A G G + + Q
Sbjct: 374 DQITFTDIEAFFLSGQSDQLDGSANSGDLGVSAGDGDDTVLGGSGDDYLLGEGGNDQLAG 433
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
TIY GDD +D GG N + E SI G + I +++ G +
Sbjct: 434 GEGNDTIYGGLGDDTID----GGAGNDLLDGEEGHDSISGGDGADLIYGGAGDDTLQGGA 489
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK- 334
D + G +V +GND+ G +G D+ + +Y + E+
Sbjct: 490 DGDTLYGGDGADVIDGGTGNDLIYGDAGDDSL--EGGAGDDTVYGGIGNDTIDGGAENDL 547
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D + + L I+ A + + G D EG
Sbjct: 548 LDGGAGNDLLYGGAGDDQLEGGGGDDIVHGGAGADVISGGAGNDKLFGDAGSDRISGGEG 607
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
D + +G D + G L+ A ++ LI
Sbjct: 608 NDY-------------VDGGYGDDYLSGDGRGAGGGHDTLVGGAGNDTLDGGAGNDQLIG 654
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ V G D S+FG
Sbjct: 655 GDGNDLFRVSEGHDTVSDFGFGNTGRTGDGDS 686
Score = 86.4 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 66/476 (13%), Positives = 110/476 (23%), Gaps = 36/476 (7%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ + + D AD G + + G H G
Sbjct: 237 GGAGDDSLQGGGGSDTLVGGDGADTLEGGACNDVLNGGAGNDVLDGGSGDDHLWDGAGDD 296
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
G D S + AS G+ + + Y +
Sbjct: 297 YADGGAGDDIFYMGAGSDTLHGGTGRDSFVASDGFGSDTVDGGSGDGDHDY-------ID 349
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + + S G D + ++ + ++ ++
Sbjct: 350 FRGHGQSVEVTFTGFEQGTASAGRDQITF---TDIEAFFLSGQSDQLDGSANSGDLGVSA 406
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++V+G SG+D ++G N+ GND G G DT A
Sbjct: 407 GDGDDTVLGGSGDDYLLGEGGNDQLAGGEGNDTIYGGLGDDTI-------------DGGA 453
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E D +S D L+ A + L G DV +
Sbjct: 454 GNDLLDGEEGHDSISG------GDGADLIYGGAGDDTLQGGADGDTLYGGDGADVIDGGT 507
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G D Y + N G LE
Sbjct: 508 GNDLIYGDAGDDSLEGGAGDDTVYGGIGNDTIDGGAENDLLDGGAGNDLLYGGAGDDQLE 567
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ + G D D D + +G D
Sbjct: 568 GGGGDDIVHGGAGADVISGGAGNDKLFG-------DAGSDRISGGEGNDYVDGGYGDDYL 620
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
+ G L+ A ++ LI + V G D S+FG+
Sbjct: 621 SGDGRGAGGGHDTLVGGAGNDTLDGGAGNDQLIGGDGNDLFRVSEGHDTVSDFGFG 676
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 61/458 (13%), Positives = 117/458 (25%), Gaps = 63/458 (13%)
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
D E+ S + + A +D ++ G + +Y
Sbjct: 151 DSADGESSSVRYAETDTRPGVVDGTSGNDSMDAHYTDADGDSIDDGRGGGAEGNDDVVYG 210
Query: 209 IEVQ--QKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ T++ G D + D +L GG + + + ++ G N
Sbjct: 211 GDGTDKIDAGAGNDTVFGEEGRDYIRGGAGDDSLQGGGGSDTLVGGDGADTLEGGACNDV 270
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G SG+D + + ++ +G+D+F +G DT +
Sbjct: 271 LNGGAGNDVLDGGSGDDHLWDGAGDDYADGGAGDDIFYMGAGSDTLHGGTGRDSFVASDG 330
Query: 322 ENAIIV-------------------------------YDANEHKQDFLSDVERLRFADQC 350
+ V + Q +D+E + Q
Sbjct: 331 FGSDTVDGGSGDGDHDYIDFRGHGQSVEVTFTGFEQGTASAGRDQITFTDIEAFFLSGQS 390
Query: 351 IDSVN--VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ + ++ G D + EG D Y G
Sbjct: 391 DQLDGSANSGDLGVSAGDGDDTVLGGSGDDYLLGEGGNDQLAGGEGNDTI-----YGGLG 445
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
DD + + + + L Y + +D + AD L
Sbjct: 446 DDTIDGGAGNDLLDGEE-----GHDSISGGDGADLIYGGAGDDTLQGGADGDTLYGGDGA 500
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
+ G + +Y + DD D Y G L+
Sbjct: 501 DVIDGGTG-------NDLIYGDAGDDSLEGGAGDDT----VYGGIGNDTIDGGAENDLLD 549
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
A ++ L D G D G I+
Sbjct: 550 GGAGNDLLYGGAGDDQLEGGGGDD--IVHGGAGADVIS 585
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 45/288 (15%), Positives = 73/288 (25%), Gaps = 24/288 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + D G+G TI + G
Sbjct: 405 SAGDGDDTVLGGSGDDYLLGEGGNDQLAGGEGNDTIYGGLGDDTIDGGAGNDLLDGEEGH 464
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G +YG D Y ++D G + +++
Sbjct: 465 DSISGGDGADLIYGGAGDDTLQGGADGDTLYGGDGADVIDGGTGNDLIYGDAGDDSLEGG 524
Query: 195 YGAPKGSLG---NNIYKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYID 244
G G + I +Y GDD L D + GG +
Sbjct: 525 AGDDTVYGGIGNDTIDGGAENDLLDGGAGNDLLYGGAGDDQLEGGGGDDIVHGGAGADVI 584
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND--------------VVIGNSANNVFF 290
+ G + I+ + V G G+D ++G + N+
Sbjct: 585 SGGAGNDKLFGDAGSDRISGGEGNDYVDGGYGDDYLSGDGRGAGGGHDTLVGGAGNDTLD 644
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+GND G G D F + F N D + D L
Sbjct: 645 GGAGNDQLIGGDGNDLFRVSEGHDTVSDFGFGNTGRTGDGDSSNNDVL 692
>gi|325139764|gb|EGC62297.1| iron-regulated protein FrpA [Neisseria meningitidis CU385]
Length = 1149
Score = 91.0 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 55/416 (13%), Positives = 107/416 (25%), Gaps = 70/416 (16%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 738 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGR 797
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 798 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 857
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 858 VLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 913
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 914 IYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 973
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 974 SDTYVFGKGFGQDAVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 1033
Query: 327 VYDANEHKQDFLSDVERLRF------------------ADQCIDSVNVKQRSILEYTASY 368
V ++ ++ + F D + + L
Sbjct: 1034 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGD 1093
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRG 420
+ L G D+ G D + LY + +D N +
Sbjct: 1094 DYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDH 1149
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 66/303 (21%), Gaps = 48/303 (15%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ G+D + + N G+D G+ G D + IY +
Sbjct: 872 TDGSDRLYAYQSGNTLNGGLGDDYLYGADGDD--LLNGDAGNDSIYSGNGNDTL------ 923
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE--FGL 391
D + L + + L + LI G D E FG
Sbjct: 924 --DGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGK 981
Query: 392 SEGRDITFDSYLYLGS---------------------YDDLRNVFGSDRGAAARHYITHG 430
G+D ++ G L + Y +
Sbjct: 982 GFGQDAVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQND 1041
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
D + + + G D YLY
Sbjct: 1042 GSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLG--DDYLYGA 1099
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
DDL N G + + L ++ L + G
Sbjct: 1100 DGDDLLN-------------GDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGEG 1146
Query: 551 KDH 553
DH
Sbjct: 1147 NDH 1149
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 65/247 (26%), Gaps = 55/247 (22%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 743 GHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGRKDIIR 802
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV- 354
+ V ++ ++ + F + + V
Sbjct: 803 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 862
Query: 355 --------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L S L +G D G D +Y G
Sbjct: 863 TVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLNGDAGND-----SIYSG 917
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ +D + + Y +G + L ++ LI + G
Sbjct: 918 NGNDTLDGGEGNDAL----YGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 973
Query: 467 KDHFSNF 473
D +
Sbjct: 974 SDTYVFG 980
>gi|307825605|ref|ZP_07655823.1| Hemolysin-type calcium binding domain protein [Methylobacter
tundripaludum SV96]
gi|307733491|gb|EFO04350.1| Hemolysin-type calcium binding domain protein [Methylobacter
tundripaludum SV96]
Length = 2762
Score = 91.0 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 72/502 (14%), Positives = 135/502 (26%), Gaps = 29/502 (5%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE 72
+ + L ++ I + D+ + + + + E
Sbjct: 2160 LGNDTLDGGSGADTLIGGLGNDTYVVDDLGDVVKETSALKTEIDTVQSSITYTLGSKLEN 2219
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
++ + N T +S + AD G+G T + N +
Sbjct: 2220 LTLTGTSAINGTGNSLNNTLTGNSGDNILNGGAGADHLIGGLGNDTYVVSNVNDAVTE-- 2277
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G V +D+ ++ P + + +++
Sbjct: 2278 -----GDDEGIDTVQSSVTYTLSDNIENLTLTGASPINGTGNDLDNILIGNAGKNVLNGG 2332
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ A G GN+ Y ++ + T + G D + +++I
Sbjct: 2333 EGSDAMTGGAGNDTYVVDNTGD----VVTENANEGTDTV--------QSFITYTLGENVE 2380
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I +G++ N+ + GN A N+ S+G D+ G G DT+
Sbjct: 2381 KLTLIGTDAIDG-------IGNALNNTLTGNEAANILDGSTGADILIGGLGNDTYVVDNA 2433
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDL 371
S + K + I + S+VE L I+ + L + L
Sbjct: 2434 SDVVKETSTLSTEIDTVQSSVSYTLGSNVENLILTGAAAINGTGNSLNNQLIGNSGDNVL 2493
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D+ + G DI S D D G+ A +
Sbjct: 2494 TGGKGSDLLNGDLGNDTLKGNAGNDILQGGAD-NDSLSDTAGTNLLDGGSGADTLSGNAA 2552
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
E + D+I V G N G + + S
Sbjct: 2553 NEMFVGGTGNDTITTGNGADIIAFNRGDGMDVVNGGVGTDNTLSL-GGGIQYADLALSKS 2611
Query: 492 YDDLRNVFGSDRGAAARHYITH 513
DL G+ +
Sbjct: 2612 GKDLIVEAGNGDQVTLSGWYNT 2633
Score = 89.1 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 77/551 (13%), Positives = 149/551 (27%), Gaps = 57/551 (10%)
Query: 12 RIADHLLRDQYWSNYFIR-YKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
+ LL ++Y D L I E + + ++ S ++
Sbjct: 2069 NNGNDLLDGGAGNDYLSGGSGNDTYIIDSLGDVIAENADEGTDTVQSSI---SYTLNANV 2125
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E ++ + NG +S D G G T++
Sbjct: 2126 ENLALTGTAAINGTGNGLDNVLIGNSAANTLTGGLGNDTLDGGSGADTLIG--------- 2176
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
LG + G V + S ++Y + G A +
Sbjct: 2177 GLGNDTYVVDDLGDVVKETSALKTEIDTVQSSITYTLGSKLENLTLTGTSAINGTGN--- 2233
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-----IDL 245
+ G+ G+NI + G+D ++ + ID
Sbjct: 2234 --SLNNTLTGNSGDNI------LNGGAGADHLIGGLGNDTYVVSNVNDAVTEGDDEGIDT 2285
Query: 246 NTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
S + + +N+T+ + I + G+ ++++IGN+ NV G+D G +G
Sbjct: 2286 VQSSVTYTLSDNIENLTLTGASPI-NGTGNDLDNILIGNAGKNVLNGGEGSDAMTGGAGN 2344
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILE 363
DT+ + N + +VE+L ID + + L
Sbjct: 2345 DTYVVDNT--GDVVTENANEGTDTVQSFITYTLGENVEKLTLIGTDAIDGIGNALNNTLT 2402
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ L G D+ + + D+ ++ D +++ G+
Sbjct: 2403 GNEAANILDGSTGADILIGGLGNDTYVVDNASDVVKETSTLSTEIDTVQSSVSYTLGSNV 2462
Query: 424 RHYITHGVK--EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ I G G L + L +G D
Sbjct: 2463 ENLILTGAAAINGTGNSLNNQLIGNSGDNVLTGGKGSDLLNGDLGNDTLKG-------NA 2515
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
D D L + G++ L A++E +
Sbjct: 2516 GNDILQGGADNDSLSDTAGTNLLD--------------GGSGADTLSGNAANEMFVGGTG 2561
Query: 542 DAPDLVQAGKD 552
+ G D
Sbjct: 2562 NDTITTGNGAD 2572
Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 75/534 (14%), Positives = 148/534 (27%), Gaps = 66/534 (12%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
++ S F+ + T + + D+ G G + +
Sbjct: 2031 ALVSAVSNSGTEQADFLEAWVDENATLQGLGGNDDLYGNNGNDLLDGGAGNDYLSGGSGN 2090
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+ V + D D+ +S+ SY + + A G A
Sbjct: 2091 D----------TYIIDSLGDVIAENADEGTDTVQSSI-SYTLNANVENLALTGTAAINGT 2139
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-------IGG 238
+ + I + +L + T+ G+D +
Sbjct: 2140 GNGLDNVLIGNSAANTLTGGL--GNDTLDGGSGADTLIGGLGNDTYVVDDLGDVVKETSA 2197
Query: 239 VKNYIDLNTESWSSIGGYE-KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+K ID S + G + +N+T+ + I + G+S N+ + GNS +N+ +G D
Sbjct: 2198 LKTEIDTVQSSITYTLGSKLENLTLTGTSAI-NGTGNSLNNTLTGNSGDNILNGGAGADH 2256
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNV 356
G G DT+ + + ++ I + ++E L I+
Sbjct: 2257 LIGGLGNDTYVV--SNVNDAVTEGDDEGIDTVQSSVTYTLSDNIENLTLTGASPINGTGN 2314
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEF-----------GLSEGRDITFDSYLY- 404
+IL A L G D + +EG D Y
Sbjct: 2315 DLDNILIGNAGKNVLNGGEGSDAMTGGAGNDTYVVDNTGDVVTENANEGTDTVQSFITYT 2374
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
LG + + G+D + + + + + + LI + +V
Sbjct: 2375 LGENVEKLTLIGTDAIDGIGNALNNTLTGNEAANILD---GSTGADILIGGLGNDTYVVD 2431
Query: 465 VGKDHFSNFGCEEGRFVTFDSY--LYLGSYDDLRNVFGSDRGAAARHYITH--------- 513
D T S LGS + + G+ + + +
Sbjct: 2432 NASDVVKETSTLSTEIDTVQSSVSYTLGSNVENLILTGAAAINGTGNSLNNQLIGNSGDN 2491
Query: 514 ---------------GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G + L+ A ++ L + +G D
Sbjct: 2492 VLTGGKGSDLLNGDLGNDTLKGNAGNDILQGGADNDSLSDTAGTNLLDGGSGAD 2545
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 70/548 (12%), Positives = 124/548 (22%), Gaps = 65/548 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH--AL 132
+++ G + DV G + + +
Sbjct: 490 SGGGNDIVTALRGGNDLIEAGAGQDKVNGGAGNDVIIGGADNDILAGGANDDRLYADAPI 549
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
+ + G ++ + + D + D
Sbjct: 550 SVADAIAAGNSQTGSGQKGEWLAGESGDDTLIGGVGNDVLTGGGGNDLLIGGAGD----D 605
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
I G + + I + + D D + G + +
Sbjct: 606 DISGDADYVATDFNWTIATTNGIRQYSPVVGDPAPADFGADVIYAGAGDDYVWAGQGNDV 665
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N ++ + +VG +G D++ G ++V +GND G +G DT+ +
Sbjct: 666 LFGEDGNDSLNGQEGNDVIVGGAGVDIIGGQQGDDVLIGGTGNDTLVGGAGNDTYIFNRG 725
Query: 313 SYLYKI----------------------------YRFENAIIVYDANEHKQDFL--SDVE 342
+ N V+ D S V
Sbjct: 726 DGRDTVIDPDKDSNLLFGEGISAGDITLRLGSLELDLGNGDQVHIDGFDPNDVFNSSSVS 785
Query: 343 RLRFADQC--------------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
RFAD + + LI G D +
Sbjct: 786 TFRFADGTELSINQLLARGFDLDGSSGDDTLTGTNTTDRINGLGGNDTLIGGAGNDSLDG 845
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G D + +D G +
Sbjct: 846 GAGADILMGGAGDDTYLNVT-----GEDTLADTEGHNTLQLAQANGLGAGGLKATHYGNQ 900
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNF--GCEEGRFVTFDSYLYLGSYDDLRNVFG 500
+Y+ L N G D F G + + L L N G
Sbjct: 901 SQYLRLDIALDNGDILKIQDAFFGTDATLQFAKGNQLDLETLVGASLTTALNLQLDNSGG 960
Query: 501 SDRGAAARHYITHGVKEGRNPDAF--KALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
G A + G + A+ L A ++ LI L AG D +
Sbjct: 961 KLYGGAGADSLHGGSGDDMLSGAWGDDTLSGGAGNDTLIGGAGRDLLLGGAGNDAYQLSA 1020
Query: 559 YEEGRSIT 566
IT
Sbjct: 1021 TSGADLIT 1028
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 63/504 (12%), Positives = 121/504 (24%), Gaps = 26/504 (5%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
D + N + D+ G+ +L N + +
Sbjct: 1948 GDGQDAIENWTGPDIAGNVDTLRFGVGIAAGDISFTRTGEDLVLGINGTSDQLTIRNWRY 2007
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT-PMVSDIVAVQKIY 195
+Y+ + ++ V + D + + + +Y
Sbjct: 2008 GEAYHIKRVEFADGTEWYVAQLQALVSAVSNSGTEQADFLEAWVDENATLQGLGGNDDLY 2067
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID----LNTESWS 251
G L + + S I DS GD + + G LN +
Sbjct: 2068 GNNGNDLLDGGAGNDYLSGGSGNDTYIIDSLGDVIAENADEGTDTVQSSISYTLNANVEN 2127
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + + ++G+S + + G N+ SG D G G DT+
Sbjct: 2128 LALTGTAAINGTGNGLDNVLIGNSAANTLTGGLGNDTLDGGSGADTLIGGLGNDTYVVDD 2187
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ K I + S +E L + + L
Sbjct: 2188 LGDVVKETSALKTEIDTVQSSITYTLGSKLENLTLTGTSAINGT--------GNSLNNTL 2239
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G ++ G D + + G D ++ Y
Sbjct: 2240 TGNSGDNILNGGAGADHLIGGLGNDTY--VVSNVNDAVTEGDDEGIDTVQSSVTYTLSDN 2297
Query: 432 KEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
E + + D LI G D + + V +
Sbjct: 2298 IENLTLTGASPINGTGNDLDNILIGNAGKNVLNGGEGSDAMTGGAGNDTYVVDNTGDVVT 2357
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI--ASHEDLINAFADAPDLV 547
+ ++ G+D + Y E A++ I A + L A
Sbjct: 2358 ENANE-----GTDTVQSFITYTLGENVEKLTLIGTDAIDGIGNALNNTLTGNEAANILDG 2412
Query: 548 QAGKDHFSNFGYEEGRSITFNPDL 571
G D G + +
Sbjct: 2413 STGAD--ILIGGLGNDTYVVDNAS 2434
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 62/413 (15%), Positives = 107/413 (25%), Gaps = 71/413 (17%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+P IY V + L + I G N T+ +++
Sbjct: 1848 TFSGTPDANAIYPIDITVTATDQFGASVSDTFTLTVNPINLIEGTTDNDTLLGTAAADAL 1907
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII----- 326
VG SG+D++IG ++V + + ND G G D + + I + I
Sbjct: 1908 VGLSGSDMLIGGEGDDVLYGGADNDYLSGGLGNDVYMFGLGDGQDAIENWTGPDIAGNVD 1967
Query: 327 -----------VYDANEHKQDFLSDVE--------------------RLRFADQC----- 350
+D + + R+ FAD
Sbjct: 1968 TLRFGVGIAAGDISFTRTGEDLVLGINGTSDQLTIRNWRYGEAYHIKRVEFADGTEWYVA 2027
Query: 351 -----IDSVNVKQRS-------------ILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ +V+ L+ +DL G D+ +
Sbjct: 2028 QLQALVSAVSNSGTEQADFLEAWVDENATLQGLGGNDDLYGNNGNDLLDGGAGNDYLSGG 2087
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED- 451
G D LG G+D ++ Y + E A+ + D
Sbjct: 2088 SGNDTYIIDS--LGDVIAENADEGTDTVQSSISYTLNANVENLALTGTAAINGTGNGLDN 2145
Query: 452 -LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY-LGSYDDLRNVFGS-----DRG 504
LI A +G D + + Y + D+ + D
Sbjct: 2146 VLIGNSAANTLTGGLGNDTLDGGSGADTLIGGLGNDTYVVDDLGDVVKETSALKTEIDTV 2205
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIAS--HEDLINAFADAPDLVQAGKDHFS 555
++ Y E A+ + + L D AG DH
Sbjct: 2206 QSSITYTLGSKLENLTLTGTSAINGTGNSLNNTLTGNSGDNILNGGAGADHLI 2258
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 58/424 (13%), Positives = 103/424 (24%), Gaps = 26/424 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + + D D + Y G G L G L
Sbjct: 324 GGDDNDLLDGLSGNDYLEGGKGNDRLVGEDGFDTYVYTSGDG---FDTILDSDGQGRILY 380
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ + +GG + D L + + D + ++ AV
Sbjct: 381 NDITLSGGSQYGDARVHRDADKHLYVDVGQGLVIDGNILIKDYQPGNLNLTMTGAVAATT 440
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ ++ + I T + D ++I +
Sbjct: 441 PQTTLDIAGDLASLNTGADALGNIITDPSQAEANREDTLYDSPGNDHILSGGGNDIVTAL 500
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N I + V G +GNDV+I + ND+ G + D + AP +
Sbjct: 501 RGGNDLIEAGAGQDKVNGGAGNDVII---------GGADNDILAGGANDDRLYADAPISV 551
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
N+ E L + +L + LI
Sbjct: 552 ADAIAAGNSQTGSGQKG---------EWLAGESGDDTLIGGVGNDVLTGGGGNDLLIGGA 602
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV-FGSDRGAAARH----YITHG 430
G D + + T Y D FG+D A + G
Sbjct: 603 GDDDISGDADYVATDFNWTIATTNGIRQYSPVVGDPAPADFGADVIYAGAGDDYVWAGQG 662
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
D +L ++ ++ Q G D + + Y+
Sbjct: 663 NDVLFGEDGNDSLNGQEGNDVIVGGAGVDIIGGQQGDDVLIGGTGNDTLVGGAGNDTYIF 722
Query: 491 SYDD 494
+ D
Sbjct: 723 NRGD 726
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/348 (11%), Positives = 93/348 (26%), Gaps = 6/348 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D + ++D+ ++ G + + +++VG+ +D ++G N
Sbjct: 269 GTDQDDRIFGTQSRTFVDIGADNHPLNGWVQNGIRYIGGAGNDTLVGTDYDDKLLGGDDN 328
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
++ SGND +G G D Y + + D++ + +D+
Sbjct: 329 DLLDGLSGNDYLEGGKGNDRLVGEDGFDTYVYTSGDGFDTILDSDGQGRILYNDITLSGG 388
Query: 347 ADQCIDSVNVKQRSILEYTASYE-DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ V+ L + I ++ + +
Sbjct: 389 SQYGDARVHRDADKHLYVDVGQGLVIDGNILIKDYQPGNLNLTMTGAVAATTPQTTLDIA 448
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEG--RNPDAFKALEYIASHEDLINAFADAPDLV 463
G L + +E + + ++ + +
Sbjct: 449 GDLASLNTGADALGNIITDPSQAEANREDTLYDSPGNDHILSGGGNDIVTALRGGNDLIE 508
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
N G + L + ++ + A I G + +
Sbjct: 509 AGAGQDKVNGGAGNDVIIGGADNDILAGGANDDRLYADAPISVAD-AIAAGNSQTGSGQK 567
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
+ L + + LI + G D G I+ + D
Sbjct: 568 GEWLAGESGDDTLIGGVGNDVLTGGGGND--LLIGGAGDDDISGDADY 613
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/344 (11%), Positives = 86/344 (25%), Gaps = 49/344 (14%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
F + T + D G G ++ + G
Sbjct: 805 FDLDGSSGDDTLTGTNTTDRINGLGGNDTLIGGAGNDSLDGGAGADILMGGAG----DDT 860
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
D E + L + + + +G + + DI +
Sbjct: 861 YLNVTGEDTLADTEGHNTLQLAQANGLGAGGLKATHYGNQSQYLRLDIALDNGDILKIQD 920
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ ++ + + ++T+ + L+L L + G
Sbjct: 921 AFFGTDATLQFAKGNQLDLETLVGASLTTALNLQLDNSGGK-----------LYGGAGAD 969
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++ + + + G+ G+D + G + N+ +G D+ G +G D + A S I
Sbjct: 970 SLHGGSGDDMLSGAWGDDTLSGGAGNDTLIGGAGRDLLLGGAGNDAYQLSATSGADLITD 1029
Query: 321 FENAIIVYDANEHKQDFLS-----------------DVER-----------LRFADQCID 352
E I+ A + L+ VE FAD
Sbjct: 1030 TEGQNIIRFAADISAANLTVSTLTMAGQPALRMKVNGVEAATITSGVDHYSFEFADGSRM 1089
Query: 353 SVNVKQRS------ILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + + + L D
Sbjct: 1090 TSAEFLLNFRAEPQTVYGNGTDNTLYGGQAGDTLYGQDGNDSLW 1133
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+D+ G N I L+ + + + N TI + + G SG+D++IG+ +++ F
Sbjct: 1594 VDIINGGEGDNTITLSDD-FGIVHAGGGNDTIQSYARAALLDGGSGDDLIIGSYYDDIIF 1652
Query: 291 ESSGNDVFDGSSGLDTFFY----YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
SGND+ +G +G D ++ +Y D+N D ++ F
Sbjct: 1653 GGSGNDLLEGGAGNDRYYVMADDTGTDLIYDTGFSGGYGGGIDSNTVVFDKGINLSSFNF 1712
Query: 347 ADQC 350
+
Sbjct: 1713 SWGS 1716
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 36/271 (13%), Positives = 66/271 (24%), Gaps = 28/271 (10%)
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ G+ D F I + + + N + + + L D +
Sbjct: 266 ILYGTDQDDRIFGTQSRTFVDIGADNHPLNGWVQNGIRYIGGAGNDTLVGTDYDDKLLGG 325
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYE--FGLSEGRDITFDSYL----------- 403
+L+ + + L G D F + +G D DS
Sbjct: 326 DDNDLLDGLSGNDYLEGGKGNDRLVGEDGFDTYVYTSGDGFDTILDSDGQGRILYNDITL 385
Query: 404 -YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
Y D R +D+ + ++ + + A L
Sbjct: 386 SGGSQYGDARVHRDADKHLYVDVGQGLVIDGNILIKDYQPGNLNLTMTGAVAATTPQTTL 445
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
G N G + + D + +D Y + G +
Sbjct: 446 DIAGDLASLNTGADALGNIITDPSQAEANREDTL-------------YDSPGNDHILSGG 492
Query: 523 AFKALEYIASHEDLINA-FADAPDLVQAGKD 552
+ + DLI A AG D
Sbjct: 493 GNDIVTALRGGNDLIEAGAGQDKVNGGAGND 523
Score = 39.8 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 31/78 (39%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ G+ D+++ + +++ + GND G +G DT+ +++ E
Sbjct: 1248 GSAGNNPLSGTDYRDIILAGAGDDLLIGNGGNDDLHGETGTDTYRLSRGGGADQVFEVEG 1307
Query: 324 AIIVYDANEHKQDFLSDV 341
+ + + + L+
Sbjct: 1308 ETSMIEVSAYNLSRLTGT 1325
>gi|330965204|gb|EGH65464.1| Ig family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 559
Score = 91.0 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 77/263 (29%), Gaps = 3/263 (1%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + + G + T ++ G T+ + +++ G++GND +IGN+ N+
Sbjct: 181 DKSGLTGSDVLDIVVTVQNLTLTGTSGVDTLTGRSGNDTLSGAAGNDTLIGNAGNDRLDG 240
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QC 350
+GND G G DT+ S + I + ++VE L
Sbjct: 241 GTGNDTMRGGIGSDTYVVD--SASDAVTENAGEGIDTVESSVTLTLGANVENLTLTGTSA 298
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
++ + L ++ L G D + + G DI ++
Sbjct: 299 LNGTGNALDNALVGNSAVNTLTGGAGNDRLDGKGGADKLVGGAGNDIYVVDNASDTLTEN 358
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ + + + + A L A G D
Sbjct: 359 ANEGIDTVESSLTWTLGNNLENLTLIGTSAISGTGNALANVLTGNAAGNSLGGGAGNDTL 418
Query: 471 SNFGCEEGRFVTFDSYLYLGSYD 493
G + + YL
Sbjct: 419 DGQGGADTLTGGTGNGTYLLGRG 441
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 38/276 (13%), Positives = 76/276 (27%), Gaps = 15/276 (5%)
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
+ V T S D G + + +G
Sbjct: 199 NLTLTGTSGVDTLTGRSGNDTLSGAAGNDTLIGNAGNDRLDGGTGNDTMRGGIG-SDTYV 257
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
+ + D+ +SV + + + + A+
Sbjct: 258 VDSASDAVTENAGEGIDTVESSVTLTLGANVENLTLTG---TSALNGTGNALDNALVGNS 314
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWSSIG 254
+ + G+D+ + ID S +
Sbjct: 315 AVNTLTGGAGNDRLDGKGGADKLVGGAGNDIYVVDNASDTLTENANEGIDTVESSLTWTL 374
Query: 255 GYE-KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G +N+T+ + I S G++ +V+ GN+A N +GND DG G DT +
Sbjct: 375 GNNLENLTLIGTSAI-SGTGNALANVLTGNAAGNSLGGGAGNDTLDGQGGADTLTGGTGN 433
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
Y + R + + + ++ + + F D
Sbjct: 434 GTYLLGRGYGVDTLVENDS----TSANTDVVSFLDG 465
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/227 (13%), Positives = 58/227 (25%), Gaps = 31/227 (13%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWSSIGGYEKNMTIA 263
+ T+ G D + ID S + G
Sbjct: 234 GNDRLDGGTGNDTMRGGIGSDTYVVDSASDAVTENAGEGIDTVESSVTLTLGANVENLTL 293
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLY 316
T + G++ ++ ++GNSA N +GND DG G D Y +
Sbjct: 294 TGTSALNGTGNALDNALVGNSAVNTLTGGAGNDRLDGKGGADKLVGGAGNDIYVVDNASD 353
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRF-------------------ADQCIDSVNVK 357
+ N I + +++E L
Sbjct: 354 TLTENANEGIDTVESSLTWTLGNNLENLTLIGTSAISGTGNALANVLTGNAAGNSLGGGA 413
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
L+ + L G + + + L E + ++ +
Sbjct: 414 GNDTLDGQGGADTLTGGTGNGTYLLGRGYGVDTLVENDSTSANTDVV 460
Score = 42.9 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 23/236 (9%), Positives = 41/236 (17%), Gaps = 24/236 (10%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
L L A + LI G D + G D
Sbjct: 202 LTGTSGVDTLTGRSGNDTLSGAAGNDTLIGNAGNDRLDGGTGNDTMRGGIGSDTYVVDSA 261
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
++ + + + + A L+ A
Sbjct: 262 SDAVTENAGEGIDTVESSVTLTLGANVENLTLTGTSALNGTGNALDNALVGNSAVNTLTG 321
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD---------------------LRNVFGSD 502
G D G + + +Y+ L N +
Sbjct: 322 GAGNDRLDGKGGADKLVGGAGNDIYVVDNASDTLTENANEGIDTVESSLTWTLGNNLENL 381
Query: 503 RGAAARHYITHGVKEGRNPDAF---KALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G +L A ++ L G +
Sbjct: 382 TLIGTSAISGTGNALANVLTGNAAGNSLGGGAGNDTLDGQGGADTLTGGTGNGTYL 437
>gi|163748242|ref|ZP_02155537.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Oceanibulbus indolifex HEL-45]
gi|161378489|gb|EDQ02963.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Oceanibulbus indolifex HEL-45]
Length = 351
Score = 91.0 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 33/209 (15%)
Query: 178 GYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
+ TPM+ DI+A Q +YG +LG++IY + +TI+D+GG D D + I
Sbjct: 2 YFPTTPMILDILAAQWLYGPNMNTNLGDDIYAF---SPSQTYHETIWDAGGIDTFDASEI 58
Query: 237 GGVKNYIDLNTESWSSIGG------------YEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ IDL + S +G + + IA IE+ +G G+D + GN
Sbjct: 59 TTGVS-IDLRPGTLSDVGSTITAATISGTTALTETVGIAFGAFIENAIGGDGSDSLRGNE 117
Query: 285 ANNVFFE---------SSGNDVFDGS------SGLDTFFYYAPSYLYKIYRFENAIIVYD 329
NN+ + G+DV + DT ++ S + I + V
Sbjct: 118 LNNILWGGDGADIMGGGGGSDVLIAASQSTQPGTGDTAYFEGRSDTFDIVGGID-YTVVT 176
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
A + +D L + LRF DQ I+
Sbjct: 177 ATDGSRDKLFGFQFLRFDDQLIELNAGSA 205
>gi|330959384|gb|EGH59644.1| glycosyl transferase group 1 [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 471
Score = 91.0 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 85/231 (36%), Gaps = 48/231 (20%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-------------NPDAFKAL 443
F + YL DL + A+HY+ +G EGR N F
Sbjct: 6 FDFSTAEYLRLNPDLAS----TGLHPAQHYLDYGHAEGRKYQDISVEKKQLLNLGIFDPD 61
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGS 501
Y++ + D+ +A D +HF + GC EGR+ + F S Y+ + + R+ +
Sbjct: 62 FYLSQYPDVSSAGLDPA-------EHFLSSGCAEGRWASLFFRSDWYMDCHPESRSHHKN 114
Query: 502 DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
HY G + G P+ F+ Y ++D I +Q HF G+E
Sbjct: 115 ----CLFHYSETGSRLGYEPNPFFEPEYYSTKYKDQIG--------LQEPLAHFIKHGHE 162
Query: 561 E-GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
+ S F+ Y G +HY+ GM+ G L +
Sbjct: 163 DLNPSPRFDAAAY-------IKATGCSG-NPLKHYLETGMQAGAPLQRAEP 205
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 66/217 (30%), Gaps = 48/217 (22%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--------------ITFDSYLY 404
S EY DL +H+ ++G +EGR FD Y
Sbjct: 8 FSTAEYLRLNPDLAST----GLHPAQHYLDYGHAEGRKYQDISVEKKQLLNLGIFDPDFY 63
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
L Y D+ + A H+++ G EGR F ++ ++ ++ +
Sbjct: 64 LSQYPDVSSA----GLDPAEHFLSSGCAEGRWASLFFRSDW------YMDCHPESRSHHK 113
Query: 465 VGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
H+S G G F+ Y Y D H+I HG E NP
Sbjct: 114 NCLFHYSETGSRLGYEPNPFFEPEYYSTKYKDQI-----GLQEPLAHFIKHG-HEDLNPS 167
Query: 523 A-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
F A YI + H+ G
Sbjct: 168 PRFDAAAYIKA-----------TGCSGNPLKHYLETG 193
Score = 44.0 bits (102), Expect = 0.075, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 30/98 (30%), Gaps = 22/98 (22%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR-------------ALGISGMQ 611
F+ YL DL S AQHY+ +G EGR LGI
Sbjct: 6 FDFSTAEYLRLNPDL----ASTGLHPAQHYLDYGHAEGRKYQDISVEKKQLLNLGIFDPD 61
Query: 612 FKSVMNLSEKSR--DKADLSLSFDHKKV---DLYTDYF 644
F S D A+ LS + L+
Sbjct: 62 FYLSQYPDVSSAGLDPAEHFLSSGCAEGRWASLFFRSD 99
>gi|320120425|gb|ADW16141.1| hypothetical protein HMPREF0389_01695 [Filifactor alocis ATCC 35896]
Length = 1989
Score = 91.0 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 68/530 (12%), Positives = 150/530 (28%), Gaps = 43/530 (8%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + D +++N + D + + D G TI + +
Sbjct: 864 NQITTGDDFIETTNDNDEIDLLSGDDTVYTKSG---KDTIHGNAGADTIYAGEGDDILYG 920
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G NG + G D + +Y + +D Y D +
Sbjct: 921 DEGSDKLYGENGEDTLIGGTGDDYLN-GGYGADTYLFHKGDGIDTIEEYDYNTQNIDKIQ 979
Query: 191 VQKIYGAPK--GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ K + N +I + + I + + ++ + G + I
Sbjct: 980 LDKDIKKEDIILNRKGNDLEITFKAGNDKIIVKNQFANANSTIEQIVYGNNQ-IIAFQEM 1038
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ K + + +VGS +D + G + G+D+ DG G DT++
Sbjct: 1039 LDTTNQNSIKEHLLQGAYTDDILVGSQESDTIHGYDGQDQITGGKGDDILDGGYGNDTYY 1098
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFL-----------------------------S 339
Y I + + +D +
Sbjct: 1099 YNKGDGSDIITDYSGNNTLILGEGISKDKVVFTRVSREDIVMSIVGTEDKITIKNQWNNR 1158
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT- 398
+++++F D + + + + T + L G D+ E K G D
Sbjct: 1159 TIDKVQFHDGSSLTYDQIKSIVNTPTDRDDYLEGTNGADILEGGKGNDHLNGGYGGDTYV 1218
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
F + +D + + V R + + S++ + + +
Sbjct: 1219 FSRGDGQDTIEDYSGGYEGVDKLIFKDINREDVIFSRESEKDITILVKNSNDKIKIKYGN 1278
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
P HF+N + + Y Y D ++ + + + G
Sbjct: 1279 NPYHAIEEI-HFANGEVMTYEEMMKQPFEY---YGDEQDNTINTYSTDDKIFAGAGNDRI 1334
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
D + ++++ + + G DH G G + F+
Sbjct: 1335 HAGDGNNIVYGGEGNDEIRSGSGNDILEGGKGNDH--LNGGYGGDTYVFS 1382
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 54/406 (13%), Positives = 115/406 (28%), Gaps = 72/406 (17%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
G ++ + I N I V G GND + S N++
Sbjct: 1305 FEYYGDEQDNTINTYSTDDKIFAGAGNDRIHAGDGNNIVYGGEGNDEIRSGSGNDILEGG 1364
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD-----------------ANEHKQ 335
GND +G G DT+ + I + D + +
Sbjct: 1365 KGNDHLNGGYGGDTYVFSRGDGQDTIEDYSGGYEGVDKLIFKDINREDVIFSRESEKDIT 1424
Query: 336 DFLSD----------------VERLRFADQCIDS-----------VNVKQRSILEYTASY 368
+ + +E + FA+ + + +Q + + ++
Sbjct: 1425 ILVKNSNDKIKIKYGNNPYHAIEEIHFANGEVMTYEEMMKQPFEYYGDEQDNTINTYSTD 1484
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDIT----FDSYLYLGSYDDLRNV-FGSDRGAAA 423
+ + G D + EG D + L G +D +G+D +
Sbjct: 1485 DKIFAGAGNDRIHAGDGNNIVYGGEGNDEIRSGRGNDTLVGGKGNDYLQGYYGADTYIFS 1544
Query: 424 RHYITHGVKEGRNPDAF--------------KALEYIASHEDLINAFADAPDLVQVGKDH 469
R V E + ++ + ++ D+ + D V + H
Sbjct: 1545 RGDGQDIVDENNSDNSHSVVDKIVFTDINREDVIFTKENNSDVTIKVKGSEDKVTIKNAH 1604
Query: 470 FSNFGCEEGRFVTFDSYLYLGS-------YDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
+++ EE F + Y Y D ++ + + + G D
Sbjct: 1605 SNDWQIEEIHFANGEVMTYEEMMKQPFEYYGDEKDNTINTYSTDDKIFAGAGNDRIHAGD 1664
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
+ ++++ + + + G D+ GY + F+
Sbjct: 1665 GNNIVYGGEGNDEIRSGRGNDTLVGGKGNDY--LQGYYGADTYIFS 1708
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 79/569 (13%), Positives = 160/569 (28%), Gaps = 95/569 (16%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ + D ++ G G I S + + G H
Sbjct: 1315 TINTYSTDDKIFAGAGNDRIHAGDGNNIVYGGEGNDEIRSGSGNDILEGGKGNDHLNGGY 1374
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS--DIVAVQKIYGAPK 199
GG D ++ S + + D + S DI + K
Sbjct: 1375 GGDTYVFSRGDGQDTIEDYSGGYEGVDKLIFKDINREDVIFSRESEKDITILVK------ 1428
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
N+ KI+ I+ I+ + G+ + ++ + + E ++I Y +
Sbjct: 1429 --NSNDKIKIKYGNNPYHAIEEIHFANGEVMTYEEMM--KQPFEYYGDEQDNTINTYSTD 1484
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I + + GN++V G N+ GND G G D Y + Y
Sbjct: 1485 DKIFAGAGNDRIHAGDGNNIVYGGEGNDEIRSGRGNDTLVGGKGNDYLQGYYGADTYIFS 1544
Query: 320 RFENAIIVYDANEHKQDFLSD--------------------------------------- 340
R + IV + N + D
Sbjct: 1545 RGDGQDIVDENNSDNSHSVVDKIVFTDINREDVIFTKENNSDVTIKVKGSEDKVTIKNAH 1604
Query: 341 -----VERLRFADQCIDS-----------VNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+E + FA+ + + ++ + + ++ + + G D +
Sbjct: 1605 SNDWQIEEIHFANGEVMTYEEMMKQPFEYYGDEKDNTINTYSTDDKIFAGAGNDRIHAGD 1664
Query: 385 HFYEFGLSEGRDIT----FDSYLYLGSYDDLRNV-FGSDRGAAARHYITHGVKEGRNPDA 439
EG D + L G +D +G+D +R V E + ++
Sbjct: 1665 GNNIVYGGEGNDEIRSGRGNDTLVGGKGNDYLQGYYGADTYIFSRGDGQDIVDENNSDNS 1724
Query: 440 F--------------KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ ++ D+ + D V + H +++ EE F +
Sbjct: 1725 HSVVDKIVFTDINREDVIFTKENNSDVTIKVKGSEDKVTIKNAHSNDWQIEEIHFANGEV 1784
Query: 486 YLYLGS-------YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
Y Y D ++ + + + G D + ++++ +
Sbjct: 1785 MTYEEMMKQPFEYYGDEKDNTINTYSTDDKIFAGAGNDRIHAGDGNNIVYGGEGNDEIRS 1844
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITF 567
+ G D + N GY G + F
Sbjct: 1845 GRGNDILEGGKGND-YLNGGY-GGDTYIF 1871
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 67/576 (11%), Positives = 142/576 (24%), Gaps = 108/576 (18%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D I R S + D G G T + G +
Sbjct: 1336 AGDGNNIVYGGEGNDEIRSGSGNDILEGGKGNDHLNGGYGGDTYVFSR-----GDGQDTI 1390
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
S + D + + S S + +++ ++ Y
Sbjct: 1391 EDYSGGYEGVDKLIFKDINREDVIFSRESEKDITILVKNSNDK------------IKIKY 1438
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G I+ + + G ++ + I
Sbjct: 1439 GNNPYHAIEEIHFANGEVMTYEEMMKQ---------PFEYYGDEQDNTINTYSTDDKIFA 1489
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N I V G GND + N+ GND G G DT+ +
Sbjct: 1490 GAGNDRIHAGDGNNIVYGGEGNDEIRSGRGNDTLVGGKGNDYLQGYYGADTYIFSRGDGQ 1549
Query: 316 YKIYRFENA----------------------------IIVYDANEHKQDFLSD------- 340
+ + + + + + +
Sbjct: 1550 DIVDENNSDNSHSVVDKIVFTDINREDVIFTKENNSDVTIKVKGSEDKVTIKNAHSNDWQ 1609
Query: 341 VERLRFADQCIDSV-----------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+E + FA+ + + ++ + + ++ + + G D +
Sbjct: 1610 IEEIHFANGEVMTYEEMMKQPFEYYGDEKDNTINTYSTDDKIFAGAGNDRIHAGDGNNIV 1669
Query: 390 GLSEGRDIT----FDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRNPDAF---- 440
EG D + L G +D + G+D +R V E + ++
Sbjct: 1670 YGGEGNDEIRSGRGNDTLVGGKGNDYLQGYYGADTYIFSRGDGQDIVDENNSDNSHSVVD 1729
Query: 441 ----------KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+ ++ D+ + D V + H +++ EE F + Y
Sbjct: 1730 KIVFTDINREDVIFTKENNSDVTIKVKGSEDKVTIKNAHSNDWQIEEIHFANGEVMTYEE 1789
Query: 491 S-------YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED-------- 535
Y D ++ + + + G D + +++
Sbjct: 1790 MMKQPFEYYGDEKDNTINTYSTDDKIFAGAGNDRIHAGDGNNIVYGGEGNDEIRSGRGND 1849
Query: 536 -LINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
L + G D + F +G F+ +
Sbjct: 1850 ILEGGKGNDYLNGGYGGDTYI-FHKGDGNDTIFDEN 1884
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/249 (12%), Positives = 60/249 (24%), Gaps = 24/249 (9%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D I R + D + G T +
Sbjct: 1662 AGDGNNIVYGGEGNDEIRSGRGNDTLVGGKGNDYLQGYYGADTYIFSRGD---------- 1711
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ ++ D + + ++ + + S D V +
Sbjct: 1712 ---GQDIVDENNSDNSHSVVDKIVFTDINREDVIFTKENNSDVTIKVKGSEDKVTI---- 1764
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
S I +I + + + G K+ + I
Sbjct: 1765 -KNAHSNDWQIEEIHFANGEVMTYEEMMKQP------FEYYGDEKDNTINTYSTDDKIFA 1817
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N I V G GND + N++ GND +G G DT+ ++
Sbjct: 1818 GAGNDRIHAGDGNNIVYGGEGNDEIRSGRGNDILEGGKGNDYLNGGYGGDTYIFHKGDGN 1877
Query: 316 YKIYRFENA 324
I+ +
Sbjct: 1878 DTIFDENGS 1886
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 51/428 (11%), Positives = 111/428 (25%), Gaps = 65/428 (15%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS--HNALHEIGHA 131
+ I NN T S D+ G G T + I +
Sbjct: 729 TKGVTIHAGDGNNIIQGTFNGPSGNDYIYAGKGNDMIYGGTGSDTYFFEKGDGNDTIKES 788
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD---I 188
+ G + + + ++ DS+ D
Sbjct: 789 INAKDTNIVVFGKGIKKENLQIRRLNHHDVKITIKGTDDSLTIQGQIQNNEKGAIDEFFF 848
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+++ N I + + + I GDD +
Sbjct: 849 FDGERMTYKELKESANQITTGDDFIETTNDNDEIDLLSGDDTVYTKS------------- 895
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+I G TI + + G G+D + G + + +G+D +G G DT+
Sbjct: 896 GKDTIHGNAGADTIYAGEGDDILYGDEGSDKLYGENGEDTLIGGTGDDYLNGGYGADTYL 955
Query: 309 YYAPSYLYKIYRFE--------------------------NAIIVYDANEHKQDFLSD-- 340
++ + I ++ N + + + + + +
Sbjct: 956 FHKGDGIDTIEEYDYNTQNIDKIQLDKDIKKEDIILNRKGNDLEITFKAGNDKIIVKNQF 1015
Query: 341 ------VERLRFADQCIDSVNVKQRS---------ILEYTASYEDLIQVIGQDVFESMKH 385
+E++ + + I + + +L+ + + L+ D
Sbjct: 1016 ANANSTIEQIVYGNNQIIAFQEMLDTTNQNSIKEHLLQGAYTDDILVGSQESDTIHGYDG 1075
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
+ +G DI D G + + + G K +
Sbjct: 1076 QDQITGGKGDDIL----DGGYGNDTYYYNKGDGSDIITDYSGNNTLILGEGISKDKVVFT 1131
Query: 446 IASHEDLI 453
S ED++
Sbjct: 1132 RVSREDIV 1139
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/435 (12%), Positives = 108/435 (24%), Gaps = 70/435 (16%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D I R + D + G T +
Sbjct: 1498 AGDGNNIVYGGEGNDEIRSGRGNDTLVGGKGNDYLQGYYGADTYIFSRGD---------- 1547
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ ++ D + + ++ + + S D V +
Sbjct: 1548 ---GQDIVDENNSDNSHSVVDKIVFTDINREDVIFTKENNSDVTIKVKGSEDKVTI---- 1600
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
S I +I + + + + + E ++I
Sbjct: 1601 -KNAHSNDWQIEEIHFANGEVMTYEEMMK---------------QPFEYYGDEKDNTINT 1644
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
Y + I + + GN++V G N+ GND G G D Y +
Sbjct: 1645 YSTDDKIFAGAGNDRIHAGDGNNIVYGGEGNDEIRSGRGNDTLVGGKGNDYLQGYYGADT 1704
Query: 316 YKIYRFENAIIVYDANEHKQDFLS--------DVERLRFADQCIDSVN----VKQRSILE 363
Y R + IV + N + + E + F + V + +
Sbjct: 1705 YIFSRGDGQDIVDENNSDNSHSVVDKIVFTDINREDVIFTKENNSDVTIKVKGSEDKVTI 1764
Query: 364 YTASYEDLI--------QVIGQDVFESMKHFYEFGLSEGRDIT---FDSYLYLGSYDDLR 412
A D + + F +G + I D ++ G+ +D
Sbjct: 1765 KNAHSNDWQIEEIHFANGEVMTYEEMMKQPFEYYGDEKDNTINTYSTDDKIFAGAGNDRI 1824
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ + Y G E R+ LE ++ L + + G
Sbjct: 1825 HAGDGNNIV----YGGEGNDEIRSGRGNDILEGGKGNDYLNGGYGGDTYIFHKG------ 1874
Query: 473 FGCEEGRFVTFDSYL 487
+G FD
Sbjct: 1875 ----DGNDTIFDENG 1885
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/486 (9%), Positives = 126/486 (25%), Gaps = 51/486 (10%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
N+ Y S + + + + GI K ++ E +
Sbjct: 1093 GNDTYYYNKGDGSDIITDYSGNNTLILGEGISKDKVVFTRVSRE---------DIVMSIV 1143
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ + ++ + + D TP D + G
Sbjct: 1144 GTEDKITIKNQWNNRTIDKVQFHDGSSLTYDQIKSIVNTPTDRD----DYLEGTN----- 1194
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + G D + G ++ I+ + + +
Sbjct: 1195 -----GADILEGGKGNDHLNGGYGGDTYVFS-RGDGQDTIEDYSGGYEGVDKLIFKDINR 1248
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + S + ++ ++N+ GN+ + + F Y+ +
Sbjct: 1249 EDVIF--SRESEKDITILVKNSNDKIKIKYGNNPYHAIE--EIHFANGEVMTYEEMMKQP 1304
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
D ++ + S +++ +I+ +++ G D+ E
Sbjct: 1305 FEYYGDEQDNTINTYSTDDKIFAGAGNDRIHAGDGNNIVYGGEGNDEIRSGSGNDILEGG 1364
Query: 384 KHFYEFGLSEGRDIT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
K G D F + +D + + V R +
Sbjct: 1365 KGNDHLNGGYGGDTYVFSRGDGQDTIEDYSGGYEGVDKLIFKDINREDVIFSRESEKDIT 1424
Query: 443 LEYIASHEDLINAFADAPD------------------LVQVGKDHFSNFGCEEGRFVTFD 484
+ S++ + + + P +++ +++ + + D
Sbjct: 1425 ILVKNSNDKIKIKYGNNPYHAIEEIHFANGEVMTYEEMMKQPFEYYGDEQDNTINTYSTD 1484
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
++ G+ +D + + Y G E R+ L ++ L +
Sbjct: 1485 DKIFAGAGNDRIHAGDGNNI----VYGGEGNDEIRSGRGNDTLVGGKGNDYLQGYYGADT 1540
Query: 545 DLVQAG 550
+ G
Sbjct: 1541 YIFSRG 1546
>gi|152993316|ref|YP_001359037.1| hypothetical protein SUN_1733 [Sulfurovum sp. NBC37-1]
gi|151425177|dbj|BAF72680.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 1395
Score = 90.6 bits (223), Expect = 7e-16, Method: Composition-based stats.
Identities = 50/282 (17%), Positives = 93/282 (32%), Gaps = 48/282 (17%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG--------RDIT-FDSYLYLGSY 408
+ L A+ + + +++ H FGL E +D+ ++ YL S+
Sbjct: 22 FDAELYLEANPDVRKAIKEGQFEDAVHHLKVFGLKEIEEGERKFHKDLDAYNESDYLNSF 81
Query: 409 DDLRNVFGSDRGAA-ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV-- 465
+ + ++ ++ H+ G + + F +Y + I
Sbjct: 82 PEAKVALENEEVSSIFEHFCKVGYQNIVSSVNFD--KYEEKDGENIEESDKLTIEPYFDK 139
Query: 466 -------------GKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
+HF +G EG FD YL Y D++ + H+
Sbjct: 140 EWYQKMFNVYDICPIEHFLRYGSFEGKNPNPDFDVEWYLNEYPDVKESGLN----PFIHF 195
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLIN-------AFADAPDLVQAGKDHFSNFGYEEGR 563
I G EG+ + Y+ + +I +HF +G EG+
Sbjct: 196 IQFGKAEGKFQNP-DEK-YLQENIKIIEPYFDKEWYQKMFNVYDICPIEHFLRYGSFEGK 253
Query: 564 SIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+ F+ + YL Y D+ + H+I G EGR
Sbjct: 254 NPNPDFDVEWYLNEYPDVK----ESSLNSFVHFIQFGKVEGR 291
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 75/222 (33%), Gaps = 30/222 (13%)
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDD---LRNVFGSDRGAAARHYITHGVKEGRNPDA-FK 441
F ++ +G +I L + Y D + +F H++ +G EG+NP+ F
Sbjct: 114 FDKYEEKDGENIEESDKLTIEPYFDKEWYQKMFNVYDICPIEHFLRYGSFEGKNPNPDFD 173
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
Y+ + D+ + + HF FG EG+F D YL + +
Sbjct: 174 VEWYLNEYPDVKESGLNP-------FIHFIQFGKAEGKFQNPDEK-YLQENIKIIEPYFD 225
Query: 502 DRGA----------AARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAG 550
H++ +G EG+NP+ F Y+ + D+ +
Sbjct: 226 KEWYQKMFNVYDICPIEHFLRYGSFEGKNPNPDFDVEWYLNEYPDVKES-------SLNS 278
Query: 551 KDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQ 592
HF FG EGR + + F +
Sbjct: 279 FVHFIQFGKVEGRFQNVDEKDRSILNQKIKKYFQRAENNIID 320
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 65/194 (33%), Gaps = 39/194 (20%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV------TFDSYL---YL 489
F A Y+ ++ D+ A + + H FG +E D+Y YL
Sbjct: 21 DFDAELYLEANPDVRKAIKEG--QFEDAVHHLKVFGLKEIEEGERKFHKDLDAYNESDYL 78
Query: 490 GSYDDLRNVFGSDRGAAA-RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
S+ + + ++ ++ H+ G + + F E +D N ++
Sbjct: 79 NSFPEAKVALENEEVSSIFEHFCKVGYQNIVSSVNFDKYE----EKDGENIEESDKLTIE 134
Query: 549 AGKD-----------------HFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSA 589
D HF +G EG++ F+ + YL Y D+
Sbjct: 135 PYFDKEWYQKMFNVYDICPIEHFLRYGSFEGKNPNPDFDVEWYLNEYPDVK----ESGLN 190
Query: 590 AAQHYITHGMKEGR 603
H+I G EG+
Sbjct: 191 PFIHFIQFGKAEGK 204
>gi|194337579|ref|YP_002019373.1| Hemolysin-type calcium-binding region [Pelodictyon
phaeoclathratiforme BU-1]
gi|194310056|gb|ACF44756.1| Hemolysin-type calcium-binding region [Pelodictyon
phaeoclathratiforme BU-1]
Length = 1099
Score = 90.6 bits (223), Expect = 7e-16, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 86/187 (45%), Gaps = 21/187 (11%)
Query: 441 KALEYIASHEDLINAFADAPDLVQV---GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ +Y+AS+ DL++ H++N+ EGR +TF+++ YL S DL N
Sbjct: 11 DSWQYLASYADLMDWLGADGLTDADSDTAAQHYNNYARSEGRTITFNAWEYLASNPDLMN 70
Query: 498 VFG------SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL---VQ 548
G +D A +HYI HG E R F A EY+AS+ DL+N
Sbjct: 71 WLGADGFTHADATTATKHYIEHGYHEDRTIT-FDAWEYLASNPDLMNWLGADGVTDADAV 129
Query: 549 AGKDHFSNFGYEEGRSITFNPDLYLTSYD-------DLWNVFGSDRSA-AAQHYITHGMK 600
H+ +G E R+ITF+ YL + DL ++ G + AAQHYIT+G
Sbjct: 130 TAAKHYMQYGVHEDRTITFDAAAYLAANADLQHWIYDLLHLSGDAANDFAAQHYITNGRF 189
Query: 601 EGRALGI 607
E R
Sbjct: 190 ENRMGTP 196
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 49/142 (34%), Positives = 67/142 (47%), Gaps = 16/142 (11%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSD------RGAAARHYITHGVKEGRNPDAFKALEYIASH 533
+ DS+ YL SY DL + G+D AA+HY + EGR F A EY+AS+
Sbjct: 7 AGSLDSWQYLASYADLMDWLGADGLTDADSDTAAQHYNNYARSEGRTIT-FNAWEYLASN 65
Query: 534 EDLINAFADAPDL---VQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDR--- 587
DL+N H+ GY E R+ITF+ YL S DL N G+D
Sbjct: 66 PDLMNWLGADGFTHADATTATKHYIEHGYHEDRTITFDAWEYLASNPDLMNWLGADGVTD 125
Query: 588 ---SAAAQHYITHGMKEGRALG 606
AA+HY+ +G+ E R +
Sbjct: 126 ADAVTAAKHYMQYGVHEDRTIT 147
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 64/196 (32%), Positives = 89/196 (45%), Gaps = 24/196 (12%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFE------SMKHFYEFGLSEGRDITFDSYLY 404
+ S+ +Y ASY DL+ +G D + +H+ + SEGR ITF+++ Y
Sbjct: 2 VTSIVAGSLDSWQYLASYADLMDWLGADGLTDADSDTAAQHYNNYARSEGRTITFNAWEY 61
Query: 405 LGSYDDLRNVFGSDR------GAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN---A 455
L S DL N G+D A +HYI HG E R F A EY+AS+ DL+N A
Sbjct: 62 LASNPDLMNWLGADGFTHADATTATKHYIEHGYHEDRTIT-FDAWEYLASNPDLMNWLGA 120
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS--------YDDLRNVFGSDRGAAA 507
H+ +G E R +TFD+ YL + YD L + AA
Sbjct: 121 DGVTDADAVTAAKHYMQYGVHEDRTITFDAAAYLAANADLQHWIYDLLHLSGDAANDFAA 180
Query: 508 RHYITHGVKEGRNPDA 523
+HYIT+G E R
Sbjct: 181 QHYITNGRFENRMGTP 196
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 74/217 (34%), Gaps = 16/217 (7%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T ++ ++ + + D SD + + + EY
Sbjct: 3 TSIVAGSLDSWQYLASYADLMDWLGADGLTDADSDTAAQHYNNYARSEGRTITFNAWEYL 62
Query: 366 ASYEDLIQVIG------QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
AS DL+ +G D + KH+ E G E R ITFD++ YL S DL N G+D
Sbjct: 63 ASNPDLMNWLGADGFTHADATTATKHYIEHGYHEDRTITFDAWEYLASNPDLMNWLGADG 122
Query: 420 ------GAAARHYITHGVKEGRNPDAFKALEYIASHEDL----INAFADAPDLVQVGKDH 469
AA+HY+ +GV E R A A+ + H
Sbjct: 123 VTDADAVTAAKHYMQYGVHEDRTITFDAAAYLAANADLQHWIYDLLHLSGDAANDFAAQH 182
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ G E R T L + D ++ + A
Sbjct: 183 YITNGRFENRMGTPVESYALTTAQDNKSAYHFTSNPA 219
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/212 (13%), Positives = 63/212 (29%), Gaps = 6/212 (2%)
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
+ + + D ++D + GY + A K+ + +
Sbjct: 757 YTADENDAHVISSTNAGNADGLVDINTGYAGSAATLAAGAFDKLVVLEGATAND---GGA 813
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
D+ LD + + + + G ++TI ++
Sbjct: 814 EGAMTITIADAWTDNTTGFTLDASAVLDTDANLATGGAVITVENGDLADLTIQGTQNSDA 873
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G D + GN+ N+ G DV DG +G+DT + + + A
Sbjct: 874 ITDGRGADTINGNAGNDTISAGEGQDVVDGGAGIDTISLTETGVAPLVQVKDTVVSDVIA 933
Query: 331 NEHK---QDFLSDVERLRFADQCIDSVNVKQR 359
H F S ++ + ++ +
Sbjct: 934 VAHADLITGFASGTDKFNYNGALLNGLGTNAD 965
>gi|240137927|ref|YP_002962399.1| putative glycosyl transferase [Methylobacterium extorquens AM1]
gi|240007896|gb|ACS39122.1| putative glycosyl transferase [Methylobacterium extorquens AM1]
Length = 1296
Score = 90.6 bits (223), Expect = 7e-16, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 79/232 (34%), Gaps = 31/232 (13%)
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP---------------- 437
GR FD Y Y DL + G + RHY+ HG EGR P
Sbjct: 23 GRGGGFDPDFYRRYYPDL-AILGDESKVLKRHYLDHGRAEGRFPNAAALVAALEAEGGAL 81
Query: 438 -DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
F Y A ++DL +H+ FG EGR D + Y+ +
Sbjct: 82 PSDFIPEHYRALYDDLAG-----LTEPWQLSEHYLRFGRFEGRAHGADLSAFEQEYERML 136
Query: 497 NVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLI-NAFADAPDLVQAGKDHF 554
+ G H + R P A+ L + L P G F
Sbjct: 137 ASGAALNGRRPAESFVHLLVAARVLPGAWLDLFVLHEFALLNEGWLTHPPASRMEGLVAF 196
Query: 555 SNFGYEEGRSIT----FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
G E I+ F+P Y ++ D + G+ + +H++ G+++G
Sbjct: 197 LTEGVERLAPISLRLRFDPHFYRSNNPD--SSAGASDADLYRHWLGKGIQKG 246
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 44/133 (33%), Gaps = 24/133 (18%)
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-------- 566
+ E F Y + DL D ++ K H+ + G EGR
Sbjct: 19 ISEAGRGGGFDPDFYRRYYPDL-AILGDESKVL---KRHYLDHGRAEGRFPNAAALVAAL 74
Query: 567 ----------FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM 616
F P+ Y YDDL + ++ ++HY+ G EGRA G F+
Sbjct: 75 EAEGGALPSDFIPEHYRALYDDLAGL--TEPWQLSEHYLRFGRFEGRAHGADLSAFEQEY 132
Query: 617 NLSEKSRDKADLS 629
S +
Sbjct: 133 ERMLASGAALNGR 145
>gi|307591413|ref|YP_003900212.1| cadherin [Cyanothece sp. PCC 7822]
gi|306986267|gb|ADN18146.1| Cadherin [Cyanothece sp. PCC 7822]
Length = 1380
Score = 90.6 bits (223), Expect = 7e-16, Method: Composition-based stats.
Identities = 71/492 (14%), Positives = 131/492 (26%), Gaps = 47/492 (9%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
T + D D G G TI + EI G N G + G
Sbjct: 2 ATITGTTGNDNLAGTDSGDNINGGSGNDTISGNAGGDEIYGEDGDDVLNGGNDGDALLGG 61
Query: 150 -----------DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+++ +D+ ++ + D S M D
Sbjct: 62 IGNDILNGDAGNDNLFSDAGNDTINGGSGTDNYNADYSNASSGLIMTYDSATGNGTIVVG 121
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
++ + + F I+ +D + GG N I G +
Sbjct: 122 SEIDTFTSIELFNYFQGTNFNDVIFGGSAND---FRINGGSGNDTISGNAGGDEIYGDDG 178
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + +++ G GND++ G++ N+ F +GND +G SG D + + +
Sbjct: 179 DDVLNGGNDGDALRGGIGNDILNGDAGNDGLFSDAGNDTINGGSGTDNYNADYSNASSGL 238
Query: 319 Y----RFENAIIVYDANEHKQDFLSDVERLRFADQCI-------------DSVNVKQRSI 361
+ +E D + +E +
Sbjct: 239 IMTYDSATGNGTIVVGSE--TDTFTSIELFNYFQGTNFNDVIFGGSANDFRINGGSGNDT 296
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ A +++ G DV G DI D L + G+D
Sbjct: 297 ISGNAGGDEIYGDDGDDVLNGGNDGDALRGGIGNDILNGDAG----NDGLFSDAGNDTIN 352
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ A+ I ++ + ++
Sbjct: 353 GGSGTDNYNADYSNASSGLIMTYDSATGNGTIVVGSETDTFTSIELFNYFQG-------T 405
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
F+ ++ GS +D R GS + G E D L + L
Sbjct: 406 NFNDVIFGGSANDFRINGGSGNDTIS---GNAGGDEIYGEDGNDVLNGGNDGDALFGGIG 462
Query: 542 DAPDLVQAGKDH 553
+ AG D+
Sbjct: 463 NDILNGDAGNDY 474
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/302 (15%), Positives = 86/302 (28%), Gaps = 34/302 (11%)
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
I + S D G + N + +G
Sbjct: 276 DVIFGGSANDFRINGGSGNDTISGNAGGDEIYGDDGDDVLNGGNDGDALRGGIGNDILNG 335
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
G ++ D+ ++ + D S M D
Sbjct: 336 DAGNDGLFS-------DAGNDTINGGSGTDNYNADYSNASSGLIMTYD------------ 376
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ GN + + I+ L + + I + + I G N
Sbjct: 377 SATGNGTIVVGSETDTFTSIE---------LFNYFQGTNFNDVIFGGSANDFRINGGSGN 427
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI+ + + + G GNDV+ G + + F GND+ +G +G D + + +
Sbjct: 428 DTISGNAGGDEIYGEDGNDVLNGGNDGDALFGGIGNDILNGDAGND--YLSGGNGNDTLQ 485
Query: 320 RFENAIIVYDANEHKQDF----LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
N + D E + L D ++ + D + + ED+IQ+
Sbjct: 486 GTNNGVGERDPLEGGTESDRFILGDTTKIFYDDGNSTLAGSNDYAQINDFNPTEDIIQLN 545
Query: 376 GQ 377
G
Sbjct: 546 GS 547
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 69/277 (24%), Gaps = 51/277 (18%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G + N+ + D +G SG DT + +IY + ++ N+
Sbjct: 2 ATITGTTGNDNLAGTDSGDNINGGSGNDTI--SGNAGGDEIYGEDGDDVLNGGNDG---- 55
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ IL A ++L G D +
Sbjct: 56 -------------DALLGGIGNDILNGDAGNDNLFSDAGNDTINGGSGTDNYNADYSN-- 100
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
G + G+ T E N D+I +
Sbjct: 101 -----ASSGLIMTYDSATGNGTIVVGSEIDTFTSIELFNYFQGTNFN------DVIFGGS 149
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ G + + G G + D D G+D A
Sbjct: 150 ANDFRINGGSGNDTISGNAGGDEIYGDD-------GDDVLNGGNDGDAL----------- 191
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
R L A ++ L + + +G D++
Sbjct: 192 -RGGIGNDILNGDAGNDGLFSDAGNDTINGGSGTDNY 227
>gi|291614062|ref|YP_003524219.1| outer membrane adhesin like proteiin [Sideroxydans lithotrophicus
ES-1]
gi|291584174|gb|ADE11832.1| outer membrane adhesin like proteiin [Sideroxydans lithotrophicus
ES-1]
Length = 3778
Score = 90.6 bits (223), Expect = 7e-16, Method: Composition-based stats.
Identities = 47/365 (12%), Positives = 92/365 (25%), Gaps = 63/365 (17%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + D G G T + + G+
Sbjct: 1553 DGGLGSDTLNGGAGNDQLSGGYGNDVLTGGAGNDTLFGGEGSDTYIFN-------QGDGV 1605
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
N + + + + + +D G V
Sbjct: 1606 DLIADSNTAGQINTLRLGAGLTVPMLRLATTQDNGLLTLDFGNG---------DAVVIGG 1656
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ G +I + E Q + D G + G + + L + S +
Sbjct: 1657 FNRNDLLAGLSIQRFEFVDGTVMTAQQLVDLGINV------DGTTGDDVLLGSSSTDYMF 1710
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N + +++ G GNDV+ G N++ G DV G +G DT+ +
Sbjct: 1711 GDDGNDVLLAGAGDDALDGGYGNDVLSGEGGNDILQGGIGYDVLYGGTGNDTYVFNYGDG 1770
Query: 315 LYKIYRFENAIIVYDAN--------------------EHKQDFL--------SDVERLRF 346
+I + + + + D + + +E L F
Sbjct: 1771 QDRIIDNQGSNTLQFGAGIFASDVTFSKFGSDLQIDFSNGTDRIRVVDWFAGNSIETLTF 1830
Query: 347 ADQC-------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D + V IL + + L G D + +
Sbjct: 1831 NDGTSLDLRAMEPSFADVPIVGTVADDILTGSVGNDTLAGGQGNDTLIGGTGNDTYLFNL 1890
Query: 394 GRDIT 398
G +
Sbjct: 1891 GDGVD 1895
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 75/442 (16%), Positives = 143/442 (32%), Gaps = 25/442 (5%)
Query: 69 TFEET-SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI-LSHNALH 126
T E + SD+ + S+++ Y T + + I D + + +G G + +
Sbjct: 1363 TLTEVGTSGSDVLYGSNSSSYSDTLIGGAGNDLLIGGRGNDTYVFNLGDGADNIIDTGVS 1422
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
++ H LG+ N G+ D + +V D +D G T
Sbjct: 1423 DMAHGLGI------NVLSFGAGITAD------MITVQLDGEFGDVTLDLGGGDSVTIGQI 1470
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D+ + G L F Q D G D++D+
Sbjct: 1471 DLNTND-LNGISIEQL--KFADGSTITPFELFAQKGLDVIGGDMVDVLQGAANWTNRMQG 1527
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S+ G N + + + G G+D + G + N+ GNDV G +G DT
Sbjct: 1528 GAGDDSLSGGSINDILDGGDGNDWLDGGLGSDTLNGGAGNDQLSGGYGNDVLTGGAGNDT 1587
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCIDSVNVKQRSILEYT 365
F S Y + + ++ D+N Q L L + + L++
Sbjct: 1588 LFGGEGSDTYIFNQGDGVDLIADSNTAGQINTLRLGAGLTVPMLRLATTQDNGLLTLDFG 1647
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+I ++ + F +G +T + LG D G+++
Sbjct: 1648 NGDAVVIGGFNRNDLLAGLSIQRFEFVDGTVMTAQQLVDLGINVDGTTGDDVLLGSSSTD 1707
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
Y+ D L A + L + + + G D + + +
Sbjct: 1708 YM-------FGDDGNDVLLAGAGDDALDGGYGNDVLSGEGGNDILQGGIGYDVLYGGTGN 1760
Query: 486 YLYLGSYDDLRNVFGSDRGAAA 507
Y+ +Y D ++ ++G+
Sbjct: 1761 DTYVFNYGDGQDRIIDNQGSNT 1782
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/264 (16%), Positives = 78/264 (29%), Gaps = 31/264 (11%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ +DI S++ Y + + DV G G + + LG
Sbjct: 873 TDGADI-LQGSDSAYADVLSGGAGDDILNGGAGNDVLNGGTGNDVLNGGTGSDTYVYNLG 931
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS------- 186
+ G Y ++ + M+ S+
Sbjct: 932 DGSDRITDSGRQYYDWQTRQYRNADTNVLSFGAGITADMLTVSYDSVTLAATLVLSNGDT 991
Query: 187 ------DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
D +A+Q + A ++V T + G+D+L + +
Sbjct: 992 IEIGAPDNLAIQTLQFADGS-------TLDVNTLVGQQTLTQVGTEGNDVLTGSDSIMFR 1044
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
SI G + T+ +++ G +GND + G S N++ +GND G
Sbjct: 1045 ----------DSIQGLGGDDTLYGGAGGDTLDGGAGNDTLYGQSGNDILIGGTGNDTLSG 1094
Query: 301 SSGLDTFFYYAPSYLYKIYRFENA 324
G DT+ Y I
Sbjct: 1095 GGGNDTYVYNLGDGADTIIDLVGT 1118
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 68/455 (14%), Positives = 112/455 (24%), Gaps = 93/455 (20%)
Query: 196 GAPKGSLGNNI----YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
G G+ GN++ Y I L L GG + +
Sbjct: 668 GVLVGNDGNDVLNGGYYGNNILLGGAGDDVITGGM---LATNILQGGAGDDVLKGGWYND 724
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + N + + + G +G+D++ G++ N+V +GND+ G SG DT+ Y
Sbjct: 725 TLQGGDGNDNLDGGWGNDVLDGGAGDDILNGDTGNDVLTGGTGNDILQGGSGNDTYVYNK 784
Query: 312 PSYLYKI----YRFENAIIVYDANEHKQDFL----------------------------S 339
I Y I+ D L
Sbjct: 785 GDGADIIIDNSYYHTANNILQLGAGITADTLFVTYDSVAVTVLLDMGNGDSIHIGSPTDL 844
Query: 340 DVERLRFADQCIDSVNVK--------------------------------QRSILEYTAS 367
++ ++ AD V+ IL A
Sbjct: 845 AIQTIQLADGSTLDVDTLLRQRSLVQNGTDGADILQGSDSAYADVLSGGAGDDILNGGAG 904
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD------------DLRNVF 415
+ L G DV + + G + YD L
Sbjct: 905 NDVLNGGTGNDVLNGGTGSDTYVYNLGDGSDRITDSGRQYYDWQTRQYRNADTNVLSFGA 964
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE----DLINAFADAPDLVQVGKDHFS 471
G Y + + +E A L A D+ +
Sbjct: 965 GITADMLTVSYDSVTLAATLVLSNGDTIEIGAPDNLAIQTLQFADGSTLDVNTLVGQQTL 1024
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
EG V S + D G D Y G L +
Sbjct: 1025 TQVGTEGNDVLTGSDSIMFR--DSIQGLGGDDTL----YGGAGGDTLDGGAGNDTLYGQS 1078
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
++ LI + G D + + +I
Sbjct: 1079 GNDILIGGTGNDTLSGGGGNDTYVYNLGDGADTII 1113
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/327 (12%), Positives = 83/327 (25%), Gaps = 46/327 (14%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSS-GNDVVIGNSANNVFFES-SGNDVFDGSSGLDTFF 308
S++ G + + + + G GN++++G + ++V ++ G +G D
Sbjct: 659 STLNGLWNGGVLVGNDGNDVLNGGYYGNNILLGGAGDDVITGGMLATNILQGGAGDD--V 716
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
Y + + + IL
Sbjct: 717 LKGGWYNDTLQGGDGNDNLDGGW-----------------GNDVLDGGAGDDILNGDTGN 759
Query: 369 EDLIQVIGQDVFESMKHFYEF--GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L G D+ + + +G DI D+ Y + + L+ G Y
Sbjct: 760 DVLTGGTGNDILQGGSGNDTYVYNKGDGADIIIDNSYYHTANNILQLGAGITADTLFVTY 819
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ V + ++ + + I A + D
Sbjct: 820 DSVAVTVLLDMGNGDSIHIGSPTDLAIQTIQLADGSTLDVDTLLRQRSLVQNGTDGADIL 879
Query: 487 LYLGS-YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
S Y D+ + D L A ++ L +
Sbjct: 880 QGSDSAYADVLSGGAGD----------------------DILNGGAGNDVLNGGTGNDVL 917
Query: 546 LVQAGKDHFSNFGYEEGRSITFNPDLY 572
G D + + IT + Y
Sbjct: 918 NGGTGSDTYVYNLGDGSDRITDSGRQY 944
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 43/370 (11%), Positives = 90/370 (24%), Gaps = 38/370 (10%)
Query: 193 KIYGAPKGSLGN----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
YG +G + + GG D G +D +
Sbjct: 1227 HFYGNNLQGMGGDDTLTGTEGNDILSGGAGNDVLIGMGGSDTYIYNFGDGADQIVDYPSG 1286
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ ++ G T++ T I ++ + + N V D +G
Sbjct: 1287 TQTASGWVAGTNTLSFGTGI-----TADMVTPRYDRSVNAI-------VLDLGNGDSINV 1334
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS- 367
A + + +F + + + Q L++V +L + S
Sbjct: 1335 GAADALTIQQLKFADGSTMNLNDFLGQKTLTEV-------------GTSGSDVLYGSNSS 1381
Query: 368 --YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ LI G D+ + + + G + D+ + G + +
Sbjct: 1382 SYSDTLIGGAGNDLLIGGRGNDTYVFNLGDGA---DNIIDTGVSDMAHGLGINVLSFGAG 1438
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFAD---APDLVQVGKDHFSNFGCEEGRFVT 482
+ + + + + + D + G F
Sbjct: 1439 ITADMITVQLDGEFGDVTLDLGGGDSVTIGQIDLNTNDLNGISIEQLKFADGSTITPFEL 1498
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
F D+ +V R G L+ ++ L
Sbjct: 1499 FAQKGLDVIGGDMVDVLQGAANWTNRMQGGAGDDSLSGGSINDILDGGDGNDWLDGGLGS 1558
Query: 543 APDLVQAGKD 552
AG D
Sbjct: 1559 DTLNGGAGND 1568
Score = 44.0 bits (102), Expect = 0.090, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 34/97 (35%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG D D + ++ + + + + + + E + G++ ND +
Sbjct: 2421 GGFDPNDPQASCSIDSFKFADGTALTYDQLLTRGIDMQGSAASEVIEGTAVNDRIDALDG 2480
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
N+ GND+ G G DT+ Y I
Sbjct: 2481 NDTIIGGKGNDILRGGEGGDTYAYDLGDGTDTIIDQG 2517
>gi|307150799|ref|YP_003886183.1| C-type lectin domain-containing protein [Cyanothece sp. PCC 7822]
gi|306981027|gb|ADN12908.1| C-type lectin domain protein [Cyanothece sp. PCC 7822]
Length = 4069
Score = 90.6 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 50/428 (11%), Positives = 125/428 (29%), Gaps = 31/428 (7%)
Query: 12 RIADHLLRDQYWSNYFIRYK-PDVLTTHRLSFDITELNPNAQEVARWALG-EWSKVVDLT 69
+ + LL + I D+ + ITE + + ++ + + ++
Sbjct: 2276 QNGNDLLDGGAGVDTLIGGNGNDLYIVDTTTDIITENAAQGTDTIQSSVTFSLADLPNI- 2334
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
E ++ + N T ++ + D G+G + I
Sbjct: 2335 -ENLTLTGTNTINGTGNTLNNTITGNNANNILDGGAGIDTLIGGLGDDLYIVDTIAEIIT 2393
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
+ + + + ++ + ++ + + + I
Sbjct: 2394 ENAAQGTDTVQSSVSITLAANIENLTLTGTNTINATGNELNNTITGNNANNILDGGAGID 2453
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ LG+++Y + TI D ++ + T I L
Sbjct: 2454 TLIG-------GLGDDLY----------IVDTIADLITENAAEGTDTVQSSVSITLAA-- 2494
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+N+T+ I + G+ N+ + GN+ANN+ S G+D G G D +
Sbjct: 2495 ------NIENLTLTGTNTI-NATGNELNNTITGNNANNILDGSDGDDTLIGGLGDDLYIV 2547
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASY 368
+ + + + + L ++E L I+ +++ ++
Sbjct: 2548 DTTTDIITENAAQGTDTIQSSVTFSLANLPNIENLTLTGINTINGTGNVLNNLITGNSAN 2607
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
L G D F + + + ++ + G + +
Sbjct: 2608 NILNGGAGNDTLIGGDGFDTATYTNLQSNIQLTDNGSNNFTAQFAINGQNYTHQLQSIEK 2667
Query: 429 HGVKEGRN 436
+G +
Sbjct: 2668 FEGSQGND 2675
Score = 89.5 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 62/495 (12%), Positives = 135/495 (27%), Gaps = 45/495 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+D +S + Y+ + + D G G + + A G
Sbjct: 2083 EQNDTLLGASGDDYLYGGNGNDTLDGSDGGEGNDTLDGGDGNDYLDGGRDNDILRGASG- 2141
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ Y G D D T + S + + + AT + + +Q +
Sbjct: 2142 -----NDYLYGGGGNDTLDGGDHDDTLIGSTGYDIVNYAGSHTEFQATILSDGSIQIQDM 2196
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ G+ G +I + I+ IY + G + G + + N S I
Sbjct: 2197 F-TSNGNEGTDILRE---------IEKIYFATGGGYYGVLTGGTGNDSLTANNNWSSLIF 2246
Query: 255 GYEKNMTIAQ-HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N T+ +++ G +GND++ G + N++ +G D G +G D + +
Sbjct: 2247 GDAGNDTLNGAGLGDDTLSGGTGNDLLNGQNGNDLLDGGAGVDTLIGGNGNDLYIVDTTT 2306
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + + + L ++E L + +
Sbjct: 2307 DIITENAAQGTDTIQSSVTFSLADLPNIENLTLTGTNTINGT--------GNTLNNTITG 2358
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
++ + G D+ + G+D ++ E
Sbjct: 2359 NNANNILDGGAGIDTLIGGLGDDLYIVDT--IAEIITENAAQGTDTVQSSVSITLAANIE 2416
Query: 434 GRNPDAFKALE--YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+ + + A+ G D ++ V + L +
Sbjct: 2417 NLTLTGTNTINATGNELNNTITGNNANNILDGGAGIDTLIGGLGDDLYIVDTIADLITEN 2476
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-----------FKALEYIASHEDLINAF 540
G+D ++ E + ++ L +
Sbjct: 2477 -----AAEGTDTVQSSVSITLAANIENLTLTGTNTINATGNELNNTITGNNANNILDGSD 2531
Query: 541 ADAPDLVQAGKDHFS 555
D + G D +
Sbjct: 2532 GDDTLIGGLGDDLYI 2546
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 60/438 (13%), Positives = 119/438 (27%), Gaps = 30/438 (6%)
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
Y + DS+ T + +D S T I YG +
Sbjct: 1872 YIQATNTGLITQTNNLDSWETFTPEFRNNDIDTLDFSATTTKT-----ISLNLGYYGQQQ 1926
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + + ++ L+ T+ G N S+ G + N
Sbjct: 1927 INE---NLFLTLNTYFGSNAYINIENAVGGSLNDTIRGNNLNNFLRGNGGNDSLYGGDGN 1983
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-YYAPSYLYKI 318
++ + + G +GND ++G+ N+ +SG+D G +G DT +
Sbjct: 1984 DSLDGEDGNDFLDGGNGNDTLLGSLGNDTLLSASGDDYLYGGNGNDTLDGSDGGEGNDTL 2043
Query: 319 YRFENAIIVYDA-------NEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + D+L + L +Q + L
Sbjct: 2044 DGGDGNDYLDGGRDNDILRGASGNDYLYGGGGNDTLDGGEQNDTLLGASGDDYLYGGNGN 2103
Query: 369 EDL---IQVIGQDVFESMKHFYEFGLSEGRDIT----FDSYLYLGSYDDLRNVFGSDRGA 421
+ L G D + DI + YLY G +D + D
Sbjct: 2104 DTLDGSDGGEGNDTLDGGDGNDYLDGGRDNDILRGASGNDYLYGGGGNDTLDGGDHDDTL 2163
Query: 422 --AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEE 477
+ + I + A + +D+ + + + + F+ G
Sbjct: 2164 IGSTGYDIVNYAGSHTEFQATILSDGSIQIQDMFTSNGNEGTDILREIEKIYFATGGGYY 2223
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
G L + ++ ++ D G + G L ++ L
Sbjct: 2224 GVLTGGTGNDSLTANNNWSSLIFGDAGNDTLNGAGLGDDTLSGGTGNDLLNGQNGNDLLD 2283
Query: 538 NAFADAPDLVQAGKDHFS 555
+ G D +
Sbjct: 2284 GGAGVDTLIGGNGNDLYI 2301
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/511 (9%), Positives = 118/511 (23%), Gaps = 44/511 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
I D D G + + E +
Sbjct: 2128 DGGRDNDILRGASGNDYLYGGGGNDTLDGGDHDDTLIGSTGYDIVNYAGSHTEFQATILS 2187
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G + + ++ G + ++ ++
Sbjct: 2188 DGSIQIQDMFTSNGNEGTDILREIEKIYFATGGGYYGVLTGGTGNDSLTANNNWSSLIFG 2247
Query: 195 YGAPKG----SLGNNIYKI------------EVQQKDSPFIQTIYDSGGDDL-------- 230
LG++ + T+ G+DL
Sbjct: 2248 DAGNDTLNGAGLGDDTLSGGTGNDLLNGQNGNDLLDGGAGVDTLIGGNGNDLYIVDTTTD 2307
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ + I + + +N+T+ I + G++ N+ + GN+ANN+
Sbjct: 2308 IITENAAQGTDTIQSSVTFSLADLPNIENLTLTGTNTI-NGTGNTLNNTITGNNANNILD 2366
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ- 349
+G D G G D + + I + +++E L
Sbjct: 2367 GGAGIDTLIGGLGDDLYIVDTIAE--IITENAAQGTDTVQSSVSITLAANIENLTLTGTN 2424
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF-----------GLSEGRDIT 398
I++ + + + + L G D + +EG D
Sbjct: 2425 TINATGNELNNTITGNNANNILDGGAGIDTLIGGLGDDLYIVDTIADLITENAAEGTDTV 2484
Query: 399 FDSYLY-LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
S L + + + G++ A + + + + + + + +D +
Sbjct: 2485 QSSVSITLAANIENLTLTGTNTINATGNELNNTI----TGNNANNILDGSDGDDTLIGGL 2540
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ +G S + +
Sbjct: 2541 GDDLYIVDTTTDIITENAAQGTDTIQSSVTFSLANLPNIENLTLTGINTINGTGNVLNNL 2600
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
A L A ++ LI
Sbjct: 2601 ITGNSANNILNGGAGNDTLIGGDGFDTATYT 2631
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/301 (14%), Positives = 79/301 (26%), Gaps = 14/301 (4%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+S++G SGND + G + N+ + +D G SG D Y S I N +
Sbjct: 3534 GNDSLIGGSGNDTLYGGAGNDTLNGGTDDDSLVGGSGND--VYIVDSINDVITENLNDGV 3591
Query: 327 VYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+++ERL I+ + + A L G D +
Sbjct: 3592 DQVNASVSYTLSANLERLSLTGTSDINGTGNSFNNSIIGNAGNNTLTGAGGNDTVDGGAG 3651
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE-GRNPDAFKALE 444
G L + + + +E + F E
Sbjct: 3652 NDLIVEDTGAYYYNGKTYILTDPGTWQQAQAQAQVLGGNLVAINTQQEQDWIVNTFGGTE 3711
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD--SYLYLGSYDDLRNVFGS- 501
+ + D L + + + E ++ Y+ ++ +
Sbjct: 3712 LLWIGLTDEASEGDFRWLTGEAYTYNNWWASFEPNNTYYNGEPENYVLINWEIPGGWNDI 3771
Query: 502 -------DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
G L+ A ++ L D L AG D +
Sbjct: 3772 IPNRNHRGIVELDGSSSLIGNDSLNGGTGNDTLDAGAGNDTLNGGIGDDSLLGSAGNDIY 3831
Query: 555 S 555
Sbjct: 3832 I 3832
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 60/513 (11%), Positives = 130/513 (25%), Gaps = 53/513 (10%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S D G G ++ I + Y + ++
Sbjct: 3065 GGSGNDTLNGGAGNDTLVGGTGNEVYNVDSSTDVINENI--DEGTDTVNASATYVLSDNL 3122
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
E + + + + DI G +L + +
Sbjct: 3123 ETLTLTGTGNIDGTGNRLNNILTGNSGNNLLTGDIGNDTLNGGTGNDTLDGGVGGDSMAG 3182
Query: 214 KDSPFIQTIYD---------SGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEKNMTI- 262
+ I D + G D+++ ++ N +LN + + N+ +
Sbjct: 3183 GSGNDVYAIDDINDVIIENLNAGIDVVNTSITYTLGNNLENLNLSGYYNTNQTGNNIDLL 3242
Query: 263 ------AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF--------- 307
+++ + G+ ++++ G + N+ GND G +G DT
Sbjct: 3243 YNKINGTGNSLNNVITGNYADNILSGEAGNDSLTGFGGNDTLYGGAGNDTLDGSDSFRYY 3302
Query: 308 -----------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD---QCIDS 353
Y S I N ++V+ L A+ +
Sbjct: 3303 SMVLVGGTENDVYIIDSVNAVIVENSNEGTDLVITTTNYTLPANVDNLTLAEADFGQYNG 3362
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+IL + L G D + + ++ + YL +
Sbjct: 3363 TGNNLNNILTGNTNDNSLTGAGGNDTLDGGAGNDILIGDLTNLLEYNGHTYLLTTPGTWQ 3422
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF-SN 472
S + + +T +N Y L + + G+ +
Sbjct: 3423 QVQSQAQSLGGNLVTINSGAEQNWLVNNFTGYEPLWIGLTDELIEGEFKWSTGEILSDVD 3482
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN----------PD 522
+ E + Y +Y + + + G+ E
Sbjct: 3483 YQNWETNQPDNNFYGTPENYVLMNSSSPGKWSDNIPDFNYRGIVELTQVLGGNDSLIGGS 3542
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
L A ++ L D + +G D +
Sbjct: 3543 GNDTLYGGAGNDTLNGGTDDDSLVGGSGNDVYI 3575
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 60/391 (15%), Positives = 109/391 (27%), Gaps = 19/391 (4%)
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ D S ++ + S D G + + + + GA
Sbjct: 2912 YNITIIATDTAGATVSNTFTLTIANLIGTSGNDTLIGTPNSEKLEGLGGNDSLAGAEGND 2971
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG--GVKNYIDLNTESW--SSIGGYE 257
+ + + I ++ D L+ G V++ ++ ++ + I
Sbjct: 2972 TLDGGTGNDSMSGGTGDDLYIVNTTSDRTLENPNEGIDTVQSSVNWTLGTYLENLILTGS 3031
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYY 310
N++ +T+ S+ G+ GN+ + G N+ SGND +G +G DT Y
Sbjct: 3032 SNLSGTGNTLNNSITGNGGNNNLSGLDGNDFLIGGSGNDTLNGGAGNDTLVGGTGNEVYN 3091
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
S I + ++E L ID + +IL +
Sbjct: 3092 VDSSTDVINENIDEGTDTVNASATYVLSDNLETLTLTGTGNIDGTGNRLNNILTGNSGNN 3151
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF-------GSDRGAA 422
L IG D G D D N G D
Sbjct: 3152 LLTGDIGNDTLNGGTGNDTLDGGVGGDSMAGGSGNDVYAIDDINDVIIENLNAGIDVVNT 3211
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ Y E N + ++ DL+ + +
Sbjct: 3212 SITYTLGNNLENLNLSGYYNTNQTGNNIDLLYNKINGTGNSLNNVITGNYADNILSGEAG 3271
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
DS G D L G+D + + +
Sbjct: 3272 NDSLTGFGGNDTLYGGAGNDTLDGSDSFRYY 3302
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/390 (12%), Positives = 95/390 (24%), Gaps = 50/390 (12%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
DV ++ ITE + + ++ ++ +L E S+ + N + +
Sbjct: 3572 DVYIVDSINDVITENLNDGVDQVNASV-SYTLSANL--ERLSLTGTSDINGTGNSFNNSI 3628
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ D G G I+ YNG +
Sbjct: 3629 IGNAGNNTLTGAGGNDTVDGGAGNDLIVEDTGA------------YYYNGKTYILTDPGT 3676
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
++ V+ + + T + I + S G+
Sbjct: 3677 WQQAQAQAQVLGGNLVAINTQQEQDWIVNTFG---GTELLWIGLTDEASEGD----FRWL 3729
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-TESWSSIGGYEKNMTI------AQH 265
++ + S + I+ W+ I + I +
Sbjct: 3730 TGEAYTYNNWWASFEPNNTYYNGEPENYVLINWEIPGGWNDIIPNRNHRGIVELDGSSSL 3789
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+S+ G +GND + + N+ G+D GS+G D + I N
Sbjct: 3790 IGNDSLNGGTGNDTLDAGAGNDTLNGGIGDDSLLGSAGNDIYIVDNI--NDVITENLNQG 3847
Query: 326 IVYDANEHKQDFLSDVERLRFAD-------------------QCIDSVNVKQRSILEYTA 366
+ +VE L L +
Sbjct: 3848 TDIVNSSVSFTLADNVENLTLTGTSNINGTGNSLNNTLTGNNGANILSGQSGNDSLNGGS 3907
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ L G D E D
Sbjct: 3908 GDDTLQGQQGNDTLTGGVGNDVLEGGESDD 3937
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 60/397 (15%), Positives = 111/397 (27%), Gaps = 34/397 (8%)
Query: 188 IVAVQKIYGAPKGSLG----NNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
IV + ++ G +G + +Y ++ G+D+ + I
Sbjct: 3525 IVELTQVLGGNDSLIGGSGNDTLYGGAGNDTLNGGTDDDSLVGGSGNDVYIVDSI-NDVI 3583
Query: 242 YIDLNTESWSSIGGYEKNMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+LN ++ T + G+S N+ +IGN+ NN + GN
Sbjct: 3584 TENLNDGVDQVNASVSYTLSANLERLSLTGTSDINGTGNSFNNSIIGNAGNNTLTGAGGN 3643
Query: 296 DVFDGSSGLDTFF-----YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
D DG +G D YY Y + + L + + D
Sbjct: 3644 DTVDGGAGNDLIVEDTGAYYYNGKTYILTDPGTWQQAQAQAQVLGGNLVAINTQQEQDWI 3703
Query: 351 IDSVNV--KQRSILEYTASYEDLIQVIG-----QDVFESMKHFYEFGLSEGRDITFDSYL 403
+++ L AS D + G + + S + + E + ++
Sbjct: 3704 VNTFGGTELLWIGLTDEASEGDFRWLTGEAYTYNNWWASFEPNNTYYNGEPENYVLINWE 3763
Query: 404 YLGSYDDLR-NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
G ++D+ N G L+ A ++ L D L
Sbjct: 3764 IPGGWNDIIPNRNHRGIVELDGSSSLIGNDSLNGGTGNDTLDAGAGNDTLNGGIGDDSLL 3823
Query: 463 VQVGKDHF----SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
G D + N E D S+ L + + + G
Sbjct: 3824 GSAGNDIYIVDNINDVITENLNQGTDIVNSSVSFT-LADNVENLTLTGTSNINGTGNSLN 3882
Query: 519 RNPDAFKALEYI---ASHEDLINAFADAPDLVQAGKD 552
+ + ++ L D Q G D
Sbjct: 3883 NTLTGNNGANILSGQSGNDSLNGGSGDDTLQGQQGND 3919
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 45/104 (43%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + ++ T +G + L+ TL G I S+ G + T+
Sbjct: 3857 FTLADNVENLTLTGTSNINGTGNSLNNTLTGNNGANILSGQSGNDSLNGGSGDDTLQGQQ 3916
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+++ G GNDV+ G +++ +G+D+ G +G++TF
Sbjct: 3917 GNDTLTGGVGNDVLEGGESDDRLAGGAGSDLLTGGNGINTFVIN 3960
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 69/438 (15%), Positives = 117/438 (26%), Gaps = 34/438 (7%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N T+S I GY N + +++ G GND++ G S N+F +G+D
Sbjct: 1686 GNNDNNTLWGTDSSDLINGYGGNDILHGKGGDDNLNGGDGNDILNGGSGKNIFNGGTGDD 1745
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA------NEHKQDFLSD--------VE 342
G + DT+ + E I + A + F + +
Sbjct: 1746 TLIGRTDDDTYIFDTDDPQGSDTINETTIALRTAHNTYIRTDAGSAFFQNDHAGPWEEFQ 1805
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ--DVFESMKHFYEFGLSEGRDITFD 400
+ D I + +A D IG + + L F
Sbjct: 1806 IITQDDGKIALQTFNNTYMRANSAWNVDQAGSIGDWEKFRVIDRGSGQIALEAHWPPDF- 1864
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
Y +Y N + + T E RN D + + +
Sbjct: 1865 WNGYRNTYIQATNTGLITQTNNLDSWETFT-PEFRNNDIDTLDFSATTTKTISLNLGYYG 1923
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR-----NVFGSDRGAAARHYITHGV 515
+ GS +D N F G Y G
Sbjct: 1924 QQQINENLFLTLNTYFGSNAYINIENAVGGSLNDTIRGNNLNNFLRGNGGNDSLYGGDGN 1983
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTS 575
D L+ ++ L+ + + L +G D+ +G ++ +
Sbjct: 1984 DSLDGEDGNDFLDGGNGNDTLLGSLGNDTLLSASGDDY--LYGGNGNDTL--DGSDGGEG 2039
Query: 576 YDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHK 635
D L G+D Y+ G G SG + ++
Sbjct: 2040 NDTLDGGDGND-------YLDGGRDNDILRGASGNDYLYGGGGNDTLDGGEQNDTLLGAS 2092
Query: 636 KVDLYTDYFGDGNYYDSD 653
D G+ SD
Sbjct: 2093 GDDYLYGGNGNDTLDGSD 2110
Score = 40.9 bits (94), Expect = 0.73, Method: Composition-based stats.
Identities = 60/569 (10%), Positives = 125/569 (21%), Gaps = 65/569 (11%)
Query: 15 DHLLRDQY-WSNYFIRYKPD--VLTTHRLSFDITELNPNAQEVARWALGEWSKVVD---- 67
D L+ ++ WS I D T++ + N + + G+WS +
Sbjct: 3463 DELIEGEFKWSTGEILSDVDYQNWETNQPDNNFYGTPENYVLMNSSSPGKWSDNIPDFNY 3522
Query: 68 ---LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
+ + +D S N + + D G G + +
Sbjct: 3523 RGIVELTQVLGGNDSLIGGSGNDTLY---GGAGNDTLNGGTDDDSLVGGSGNDVYIVDSI 3579
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
I L + + + + + + ++ + + G
Sbjct: 3580 NDVITENLNDGVDQVNASVSYTLSANLERLSLTGTSDINGTGNSFNNSIIGNAGNNTLTG 3639
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
V G Y +I T + ++GG I+
Sbjct: 3640 AGGNDTVDGGAGNDLIVEDTGAYYYN----GKTYILTDPGTWQQAQAQAQVLGGNLVAIN 3695
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
E + + + E+ G + NN + N+ +
Sbjct: 3696 TQQEQDWIVNTFGGTELLWIGLTDEASEGDFRWLTGEAYTYNNWWASFEPNNTYYNG--- 3752
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
EN +++ + + R + S ++ L
Sbjct: 3753 ---------------EPENYVLINWEIPGGWNDIIPNRNHRGIVELDGSSSLIGNDSLNG 3797
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ L G D S G DI + ++L + +
Sbjct: 3798 GTGNDTLDAGAGNDTLNGGIGDDSLLGSAGNDIYIVDNINDVITENLNQGTDIVNSSVSF 3857
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ + + + L Q G D + ++
Sbjct: 3858 TLADNVENLTLTGTSNINGTGNSLNNTLTGNNGANILSGQSGNDSLNGGSGDDTLQ---- 3913
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
G LE S + L
Sbjct: 3914 --------------------------GQQGNDTLTGGVGNDVLEGGESDDRLAGGAGSDL 3947
Query: 545 DLVQAGKDHFSNFGYEEGRSITFNPDLYL 573
G + F + F+ L
Sbjct: 3948 LTGGNGINTFVINPLTDSLLANFDRISDL 3976
>gi|254414047|ref|ZP_05027815.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196179183|gb|EDX74179.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 1962
Score = 90.6 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 60/349 (17%), Positives = 100/349 (28%), Gaps = 16/349 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
Q T+ GDDLLD GG + I + + G N T+ +T
Sbjct: 1334 GNDQLYSQSGADTLSGGIGDDLLD----GGNSDDILSGGDGDDQLYGQNGNDTLNGNTGN 1389
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +GND + G N+ + +GND +G++G D ++ + +Y
Sbjct: 1390 DYLDGGNGNDQLTGEEGNDRLYGDNGNDTLNGNAGND--LLDGGKGHDQLTGGDGNDQLY 1447
Query: 329 DANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D + + L D + L+ + L G+D +
Sbjct: 1448 GQQGKDTLDGETGNDSLWGGDHNDILLGQAGNDYLDGGKGDDQLDGGEGKDRLYGQQGED 1507
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR---NPDAFKALE 444
G D D+L G+DR Y T ++G +
Sbjct: 1508 ILKGGTGDDYL----DGGLDNDELYGNQGNDRIYGQEGYDTLDGEDGHDFLDGGLGDDFI 1563
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
Y D + L D G + + YL + F
Sbjct: 1564 YGKQGSDRLYGQQGQDYLDGGIGDDRLEAGDGDDQLYGQQGRDYLD--GGTGDDFLWGGD 1621
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
A + G L ++ L D G D+
Sbjct: 1622 DADKLLGQSGNDYLDAGSGNDQLIGGDGNDQLYGQDGDDTINAGVGNDY 1670
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/307 (13%), Positives = 76/307 (24%), Gaps = 27/307 (8%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
D G +L + + G +G +YG D D +
Sbjct: 1604 GRDYLDGGTGDDFLWGGDDADKLLGQSGNDYLDAGSGNDQLIGGDGNDQLYGQDGDDTIN 1663
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
+ + + + + G +YG + N
Sbjct: 1664 AGVGNDYLEGGLGNDQLTGGDG------------NDYLYGQDGEDILNGDAG-NDNLYGG 1710
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ G+DLL G N I + G + +A + + G G
Sbjct: 1711 ANNDQLSGGDGNDLL----YGEEGNDIIDAGLGDDYLEGGFGDDQLAGGDGNDQLYGQDG 1766
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D + N+ G+D G G D + I + N
Sbjct: 1767 DDTIDAGVGNDYLEGGLGDDQLTGGDGDD--YLQGQEGNDTIDAGAGNDYLVGGN----- 1819
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
++ L L ++LI G D + + G+D
Sbjct: 1820 ---GIDILFGQAGDDYLEGGDGDDTLYGNTGNDELIGGNGNDQLYAGEGDNILNGGLGQD 1876
Query: 397 ITFDSYL 403
+ +
Sbjct: 1877 LLYSGTG 1883
Score = 80.6 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 63/475 (13%), Positives = 113/475 (23%), Gaps = 49/475 (10%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D G GK + + G + +YG
Sbjct: 1475 GQAGNDYLDGGKGDDQLDGGEGKDRLYGQQGEDILKGGTGDDYLDGGLDNDELYGNQG-- 1532
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
ND + + D G + ++YG + + +
Sbjct: 1533 -NDRIYGQEGYDTLDGEDGHDFLDGGLGDDFIYGKQGSDRLYGQQGQDYLDGGIG-DDRL 1590
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ +Y G D LD GG + + + G N + + + ++G
Sbjct: 1591 EAGDGDDQLYGQQGRDYLD----GGTGDDFLWGGDDADKLLGQSGNDYLDAGSGNDQLIG 1646
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND + G ++ GND +G G D +Y + I+ +
Sbjct: 1647 GDGNDQLYGQDGDDTINAGVGNDYLEGGLGNDQL--TGGDGNDYLYGQDGEDIL--NGDA 1702
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D L +L + + +G D E + +
Sbjct: 1703 GNDNLYG------GANNDQLSGGDGNDLLYGEEGNDIIDAGLGDDYLEGGFGDDQLAGGD 1756
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
G D LY DD + + G + D L+ ++ +
Sbjct: 1757 GND-----QLYGQDGDDTIDAGVGNDYLE----GGLGDDQLTGGDGDDYLQGQEGNDTID 1807
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
+ + G D ++ Y
Sbjct: 1808 AGAGNDYLVGGNGIDILFGQAGDDYLEGGDGDD---------------------TLYGNT 1846
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF-SNFGYEEGRSITF 567
G E + L L G+D F G E F
Sbjct: 1847 GNDELIGGNGNDQLYAGEGDNILNGGLGQDLLYSGTGRDMFVLEAGMGEDTIFDF 1901
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 71/497 (14%), Positives = 132/497 (26%), Gaps = 53/497 (10%)
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTS 161
I D G G TI + + + G H + G + +
Sbjct: 581 IGGASNDTLTGGAGGDTIHGESGDDVLEGSAGNDHITGGGDNDKIDGGTGNDVLSGDSGN 640
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT 221
+ + D G +++ I+G + I + T
Sbjct: 641 PGEDTISGGAGNDTIGGGGNHDIINGDEGNDIIWGDSSF---DIIDVRTPAAPGAEGNDT 697
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I G+D + I G N TI I+++ G G+D +
Sbjct: 698 IDGGSGNDEI-------------HGEAGDDLITGGAGNDTIDGGEDIDTIKGGLGDDSLY 744
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----------------NA 324
G S N+ +GND+ DG G+DT Y + E N
Sbjct: 745 GGSDNDFLMGEAGNDLIDGGEGIDTVSYENSPNGVIVNSDEVLGYSNPDNTLPIAIEPNF 804
Query: 325 IIVYDANEHK---QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
I D L ++E + + + Q + ++ + LI G D +
Sbjct: 805 TIQAGTAADGFGTTDTLKNLEDIIGSPFDDVIIGNLQANSIQSLDGNDLLIGNSGNDTID 864
Query: 382 SMKHFYEFGL-------------SEGRDITFDSYLYLGSYDDLRNVFGSD--RGAAARHY 426
++ D + +L + + + + A H
Sbjct: 865 GGAGIDTISYHYDPSAVTVNLAENQATDGYGSTDTFLNIENIIGSALDDQITGDSQANHI 924
Query: 427 ITHGVKEGRNPDAFKALEYIASHED-LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ A Y + +D L+ + D S + D
Sbjct: 925 TAGAGNDSIKGGAGDDQLYGEAGDDFLMGEAGNDVLDGGDDIDTVSFTNSLNSVVINLDE 984
Query: 486 YL-YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
Y S + G D F + + + E+++ + D
Sbjct: 985 INSYSNPGGSFHTTILSTTPIPTDIEPAFTINPGTASDGFGTTDILRNIENILASQDDDV 1044
Query: 545 DLVQAGKDHFSNFGYEE 561
+ A +H G +
Sbjct: 1045 IIGNAQNNHLEGLGGND 1061
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/316 (13%), Positives = 84/316 (26%), Gaps = 15/316 (4%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + + ++I + + + + G G D + + N+ D
Sbjct: 1117 GSNSSDRLIGDANANTIITGTGDDWVEARNGDDIIFGEEGQDTLFAENGNDFLVGGKDAD 1176
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+G G DT Y+ + + V + K D + +E L +D +
Sbjct: 1177 SLNGGEGNDTASYFTAASRVAVSLTTGKGWV---GDAKGDRIEAIENLEGSDYEDLLIGN 1233
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ L A + + G DV + +G D + + F
Sbjct: 1234 SINNTLSGLAGDDLIYAKAGDDVLDGGDGSDRLFAGDGNDTLYGQAGEDLLKGQAGDDFL 1293
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ Y G L+ A ++ L D G D +
Sbjct: 1294 DGGDGNDQLYGHKGN---------DTLDGNAGNDYLEGGVGDDQLTGGEGNDQLYSQSGA 1344
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ L G D G + Y +G L+ ++ L
Sbjct: 1345 DTLSGGIGDDLLDGGNSDDILSGGDGDD---QLYGQNGNDTLNGNTGNDYLDGGNGNDQL 1401
Query: 537 INAFADAPDLVQAGKD 552
+ G D
Sbjct: 1402 TGEEGNDRLYGDNGND 1417
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/345 (12%), Positives = 87/345 (25%), Gaps = 25/345 (7%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
++ +D + T SSI G N T+ +++
Sbjct: 546 TLDGVLTKSSLEGGLNNDTIQFINSSVD-------TTQGSSIIGGASNDTLTGGAGGDTI 598
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS-YLYKIYRFENAIIVYDA 330
G SG+DV+ G++ N+ ND DG +G D + + I +
Sbjct: 599 HGESGDDVLEGSAGNDHITGGGDNDKIDGGTGNDVLSGDSGNPGEDTISGGAGNDTIGGG 658
Query: 331 NEHKQDFLSDVERLRFADQCIDSV--------NVKQRSILEYTASYEDLIQVIGQDVFES 382
H + + + D D + + ++ + +++ G D+
Sbjct: 659 GNHDIINGDEGNDIIWGDSSFDIIDVRTPAAPGAEGNDTIDGGSGNDEIHGEAGDDLITG 718
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
E D D L +D EG + +++
Sbjct: 719 GAGNDTIDGGEDIDTIKGGLGD----DSLYGGSDNDFLMGEAGNDLIDGGEGIDTVSYEN 774
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
PD + F + L + +D+ D
Sbjct: 775 SPNGVIVNSDEVLGYSNPDNTLPIAIEPNFTIQAGTAADGFGTTDTLKNLEDIIGSPFDD 834
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
++ D L + ++ +
Sbjct: 835 VI-----IGNLQANSIQSLDGNDLLIGNSGNDTIDGGAGIDTISY 874
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 70/262 (26%), Gaps = 16/262 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D T D G G + + + G
Sbjct: 1646 GGDGNDQLYGQDGDDTINAGVGNDYLEGGLGNDQLTGGDGNDYLYGQDGEDILNGDAGND 1705
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ + G D + + + D ++ FG ++ ++Y
Sbjct: 1706 NLYGGANNDQLSGGDGNDLLYGEEGNDIIDAGLGDDYLEGGFG---DDQLAGGDGNDQLY 1762
Query: 196 GAPKGSLGNNIYK--------IEVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNY 242
G + + Q + G+D +D GG
Sbjct: 1763 GQDGDDTIDAGVGNDYLEGGLGDDQLTGGDGDDYLQGQEGNDTIDAGAGNDYLVGGNGID 1822
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I + G + + T+ +T + ++G +GND + +N+ G D+ +
Sbjct: 1823 ILFGQAGDDYLEGGDGDDTLYGNTGNDELIGGNGNDQLYAGEGDNILNGGLGQDLLYSGT 1882
Query: 303 GLDTFFYYAPSYLYKIYRFENA 324
G D F A I+ F
Sbjct: 1883 GRDMFVLEAGMGEDTIFDFTVG 1904
>gi|166368587|ref|YP_001660860.1| hypothetical protein MAE_58460 [Microcystis aeruginosa NIES-843]
gi|166090960|dbj|BAG05668.1| hypothetical protein MAE_58460 [Microcystis aeruginosa NIES-843]
Length = 1318
Score = 90.6 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 71/597 (11%), Positives = 156/597 (26%), Gaps = 40/597 (6%)
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
++T E + + + + P + IN + G TI + +
Sbjct: 723 NITVVEGKDN-NAILTVTVDNPNSQPITFNYTTAPINATANVDYTSKTGTITIAPNTSTA 781
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
I + N + + + ++ ++ D T + +
Sbjct: 782 TITIPI-------LNDNLNEANETFAINLSNPINATLTNNKGIVTISDTLTANVTTTLPA 834
Query: 187 DIVAVQKIYGAPKGSLGN------NIYKIEVQQKDSPFIQTIYDSGGDDLL------DLT 234
++ + GN I T+ G+D D
Sbjct: 835 NVENLTLTGTTNINGTGNAANNIITGNSGNNILNGGTGIDTLIGGLGNDTYQVDTTTDTI 894
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ + + ++G +N+T+ I + G++ N+++ GNS NN+ ++G
Sbjct: 895 TENANQGTDTVQSSVTYTLGNNLENLTLTGTANI-NGTGNTLNNIITGNSGNNILNGATG 953
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDS 353
D G G DT+ I N + +++E L I+
Sbjct: 954 IDTLIGGLGNDTYQVDTT--TDTITENANQGTDTVQSSVTYTLGNNLENLTLTGTANING 1011
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+I+ + L G D + + D ++
Sbjct: 1012 TGNTLNNIITGNSGNNILNGATGIDTLIGGLGNDTYQVDTTTDTITENANQGTDTVQSSV 1071
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ G + + + L A + +G D +
Sbjct: 1072 TYTLGNNLENLTLTGTANINGTGNTLNNIITGNSGNNILNGATGIDTLIGGLGNDTYQVD 1131
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE--GRNPDAFKALEYIA 531
+ D +++ G + G G + +
Sbjct: 1132 TT-----TDTITENANQGTDTVQSSVTYTLGNNLENLTLTGTANINGTGNTLNNIITGNS 1186
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA 591
L + + + G D + G G TF + +D ++
Sbjct: 1187 GKNTLTGSAGNDTLIGGTGND--TITGGAGGDRFTF-------KNPNQGIDTITDFLSSQ 1237
Query: 592 QHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
IT +G+ + + + A ++ L+ D G G
Sbjct: 1238 GDKITVSAAGFGGGLAAGVAITAAQFVLGTTALNASNRFIYNTITGGLFFDGDGTGT 1294
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/431 (14%), Positives = 113/431 (26%), Gaps = 56/431 (12%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + ITE + + + + E ++ + N
Sbjct: 883 DTYQVDTTTDTITENANQGTDTVQS---SVTYTLGNNLENLTLTGTANINGTGNTLNNII 939
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+S + D G+G T I + N G
Sbjct: 940 TGNSGNNILNGATGIDTLIGGLGNDTYQVDTTTDTIT--------ENANQGTDTVQSSVT 991
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
Y + L ++ + + + G+ GNNI
Sbjct: 992 YTLGNNLENLTLTGTANINGTGNT-----------------LNNIITGNSGNNI------ 1028
Query: 213 QKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ I T+ G+D D + + + ++G +N+T+
Sbjct: 1029 LNGATGIDTLIGGLGNDTYQVDTTTDTITENANQGTDTVQSSVTYTLGNNLENLTLTGTA 1088
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
I + G++ N+++ GNS NN+ ++G D G G DT+ I N
Sbjct: 1089 NI-NGTGNTLNNIITGNSGNNILNGATGIDTLIGGLGNDTYQVDTT--TDTITENANQGT 1145
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV----------NVKQRSILEYTASYEDLIQVIG 376
+ +++E L + ++ L +A + LI G
Sbjct: 1146 DTVQSSVTYTLGNNLENLTLTGTANINGTGNTLNNIITGNSGKNTLTGSAGNDTLIGGTG 1205
Query: 377 QDVFESMKHFYEFGL---SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
D F ++G D D G + AA
Sbjct: 1206 NDTITGGAGGDRFTFKNPNQGIDTITDFLSSQGDKITVSAAGFGGGLAAGVAITAAQFVL 1265
Query: 434 GRNPDAFKALE 444
G
Sbjct: 1266 GTTALNASNRF 1276
>gi|149925647|ref|ZP_01913911.1| Hemolysin-type calcium-binding region [Limnobacter sp. MED105]
gi|149825764|gb|EDM84972.1| Hemolysin-type calcium-binding region [Limnobacter sp. MED105]
Length = 785
Score = 90.6 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 10/125 (8%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
FD Y ++ D+ + A H+ +G +GR F + Y + DL+
Sbjct: 664 FDWDYYYDAHPDVVQI----NMDMATHWKDYGFYQGRAGSFEFDPVFYWNKYPDLVQICG 719
Query: 542 DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFG-SDRSAAAQHYITHG 598
+ G H+ + G EGR S F+ YL Y DL +G + A H+IT G
Sbjct: 720 A--GNLHCGIQHWLSNGIGEGRMGSPNFSVVNYLYKYPDLLQAYGPNGFGDALHHWITVG 777
Query: 599 MKEGR 603
EGR
Sbjct: 778 KDEGR 782
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 13/132 (9%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYDDL 495
F Y +H D++ D H+ ++G +GR +F D Y Y DL
Sbjct: 662 SVFDWDYYYDAHPDVVQINMDMAT-------HWKDYGFYQGRAGSFEFDPVFYWNKYPDL 714
Query: 496 RNVFGS-DRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ G+ + +H++++G+ EGR F + Y+ + DL+ A+ P+ H
Sbjct: 715 VQICGAGNLHCGIQHWLSNGIGEGRMGSPNFSVVNYLYKYPDLLQAYG--PNGFGDALHH 772
Query: 554 FSNFGYEEGRSI 565
+ G +EGR
Sbjct: 773 WITVGKDEGRDP 784
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD Y ++ D+ + A H+ +G +GR F + Y + DL+
Sbjct: 664 FDWDYYYDAHPDVVQIN----MDMATHWKDYGFYQGRAGSFEFDPVFYWNKYPDLVQICG 719
Query: 458 DAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHG 514
+ G H+ + G EGR F YL Y DL +G + G A H+IT G
Sbjct: 720 AG--NLHCGIQHWLSNGIGEGRMGSPNFSVVNYLYKYPDLLQAYGPNGFGDALHHWITVG 777
Query: 515 VKEGRNP 521
EGR+P
Sbjct: 778 KDEGRDP 784
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRN 413
Y ++ D++Q+ + H+ ++G +GR FD Y Y DL
Sbjct: 661 ASVFDWDYYYDAHPDVVQIN----MDMATHWKDYGFYQGRAGSFEFDPVFYWNKYPDLVQ 716
Query: 414 VFG-SDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ G + +H++++G+ EGR F + Y+ + DL+ A+ P+ H+
Sbjct: 717 ICGAGNLHCGIQHWLSNGIGEGRMGSPNFSVVNYLYKYPDLLQAYG--PNGFGDALHHWI 774
Query: 472 NFGCEEGRFV 481
G +EGR
Sbjct: 775 TVGKDEGRDP 784
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
F Y +H D++ D+ H+ ++G+ +GR S F+P Y Y DL
Sbjct: 664 FDWDYYYDAHPDVVQ---INMDMAT----HWKDYGFYQGRAGSFEFDPVFYWNKYPDLVQ 716
Query: 582 VFGSDRSA-AAQHYITHGMKEGRALGIS 608
+ G+ QH++++G+ EGR +
Sbjct: 717 ICGAGNLHCGIQHWLSNGIGEGRMGSPN 744
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGR--DITFDSYLYLGSYDD 410
+ + + + Y DL+Q+ G ++H+ G+ EGR F YL Y D
Sbjct: 698 GSFEFDPVFYWN-KYPDLVQICGAGNLHCGIQHWLSNGIGEGRMGSPNFSVVNYLYKYPD 756
Query: 411 LRNVFG-SDRGAAARHYITHGVKEGRNP 437
L +G + G A H+IT G EGR+P
Sbjct: 757 LLQAYGPNGFGDALHHWITVGKDEGRDP 784
>gi|254425996|ref|ZP_05039713.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196188419|gb|EDX83384.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 2317
Score = 90.6 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 54/346 (15%), Positives = 96/346 (27%), Gaps = 23/346 (6%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGY 88
PDV++ I L N Q + +T + +
Sbjct: 1993 TRGPDVISGTNKDDKIDGLGGNDQLSGNDGNDSLDGGAN---SDTLYGGKGNDMLDGDRG 2049
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
V T + D G G T+ + G +G + G
Sbjct: 2050 VDTLFGGDGNDILNGGADNDTLDGGKGNDTLDGGRGNDTLTGGSGRDSLLGNDGNDILDG 2109
Query: 149 -VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
+ND +S D++ + G +
Sbjct: 2110 EANNDALFGGKGNDTLSGGRGVDTLNGGDG-------------NDILNGGADNDTLDGGR 2156
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
++ T+Y G+D L G N ++ G + N T+
Sbjct: 2157 GVD-TLFGGKGNDTLYGGRGNDAL----FGDDGNDTLFGRADNDTLNGGDGNDTLDGGRG 2211
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G SG D+++GN N++ + ND+ G G DTF + I F+ ++
Sbjct: 2212 NDLLTGGSGRDILLGNDGNDILDGGADNDMLSGGQGRDTFVLSLGDGVDTIIDFDTKDLI 2271
Query: 328 YDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
A LS V + D + ++ L
Sbjct: 2272 GLAGGLTIGDLSFVGNNIIATDTSEVLATLTSVDTTSLNSTQFVLF 2317
Score = 90.2 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/372 (15%), Positives = 91/372 (24%), Gaps = 27/372 (7%)
Query: 204 NNIYKIEVQQK-DSPFIQTIYDSGGDDLLDLTLIGG-VKNYIDLNTESWSSIGGYEKNMT 261
N K F G +L D G I L G +
Sbjct: 1919 NTFIKFNPNTGETFEFNYDPLTGLGAELKDTNNNGLVDTVLIHLKDGGKGDADGELNGIV 1978
Query: 262 IAQHTVIESVV--GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +S+ G+ G DV+ G + ++ GND G+ G D+ + +Y
Sbjct: 1979 YDPGILAKSLSVSGTRGPDVISGTNKDDKIDGLGGNDQLSGNDGNDSL--DGGANSDTLY 2036
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ ++ + D L IL A + L G D
Sbjct: 2037 GGKGNDML--DGDRGVDTL---------------FGGDGNDILNGGADNDTLDGGKGNDT 2079
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ + GRD + + N GV D
Sbjct: 2080 LDGGRGNDTLTGGSGRDSLLGNDGNDILDGEANNDALFGGKGNDTLSGGRGVDTLNGGDG 2139
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
L A ++ L G D + F D L D +
Sbjct: 2140 NDILNGGADNDTLDGGRGVDTLFGGKGNDTLYGGRGNDALFGD-DGNDTLFGRADNDTLN 2198
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
G D G L ++ L + G+D F
Sbjct: 2199 GGDGNDTLD--GGRGNDLLTGGSGRDILLGNDGNDILDGGADNDMLSGGQGRDTFVLSLG 2256
Query: 560 EEGRS-ITFNPD 570
+ + I F+
Sbjct: 2257 DGVDTIIDFDTK 2268
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 17/140 (12%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E V+G+ G++++ G+ ++ + +GNDV G G D + I I+
Sbjct: 1643 EVVLGTDGDEIIEGSRGSDQVYGGAGNDVLIGLQGSD--YIVGQQGRDIILGKGGDDILV 1700
Query: 329 DANEHKQDFLSDVER--------LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+D + +E L F + K +L ++ + L+ G +
Sbjct: 1701 -----GEDLFNPIEAPDGSPSSDLPFVGGDVIDGG-KGDDLLLGSSGDDVLLPGFGDNAV 1754
Query: 381 ESMKHFYEFGLSEGRDITFD 400
+ + G+S G F
Sbjct: 1755 DGGEGTD-VGVSNGVSNDFS 1773
Score = 53.3 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 56/161 (34%), Gaps = 23/161 (14%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNTESWSSI---------- 253
+ + S +Y G+D+L I L +
Sbjct: 1650 GDEIIEGSRGSDQVYGGAGNDVLIGLQGSDYIVGQQGRDIILGKGGDDILVGEDLFNPIE 1709
Query: 254 ---GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G ++ VI+ G G+D+++G+S ++V G++ DG G D
Sbjct: 1710 APDGSPSSDLPFVGGDVID---GGKGDDLLLGSSGDDVLLPGFGDNAVDGGEGTDVGVSN 1766
Query: 311 APSYLYKIYRFENAIIVY--DANEHKQDFLSDVERLRFADQ 349
S + I R + +V ++ +VER +F DQ
Sbjct: 1767 GVSNDFSIRRRLDGSVVVVDVRSQKSLTLYQNVERFKFDDQ 1807
Score = 42.1 bits (97), Expect = 0.30, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 43/155 (27%), Gaps = 8/155 (5%)
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
F + V +D + D E + D + + A + LI + G D
Sbjct: 1621 AFYSVDDVLSRQAVSEDEIEDGEVVLGTDGDEIIEGSRGSDQVYGGAGNDVLIGLQGSDY 1680
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ G DI +DL N + G+ + G
Sbjct: 1681 IVGQQGRDIILGKGGDDIL--------VGEDLFNPIEAPDGSPSSDLPFVGGDVIDGGKG 1732
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
L + + L+ F D G D + G
Sbjct: 1733 DDLLLGSSGDDVLLPGFGDNAVDGGEGTDVGVSNG 1767
>gi|72383812|ref|YP_293166.1| VCBS [Ralstonia eutropha JMP134]
gi|72123155|gb|AAZ65309.1| VCBS [Ralstonia eutropha JMP134]
Length = 1883
Score = 90.6 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 69/531 (12%), Positives = 136/531 (25%), Gaps = 50/531 (9%)
Query: 7 VYTTERI-ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
YT + AD L Q+ ++ + D ++ +IT N A + ++
Sbjct: 1271 TYTLDNGKADALTAGQHVTDSLTVHSADQTAEQTITVNITGSNDTAVNAVPTSPQTVNED 1330
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY-GIGKGTILSHNA 124
L F + + + N + T G T+ +
Sbjct: 1331 TPLIFSTANGNGVSVSDADNATHTVTLTSTHGAITLNGTAGLQFLTGDGAADSTMTFTGS 1390
Query: 125 LHEIGHAL-GLMHPGSYNGGYPV-----YGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
I AL G+ G + + D+ V P + D +
Sbjct: 1391 DAAINAALNGMSFLGDKDYAGTASMQIRTDDGTSADTDTIAIMVNPVNDPPVAADDVIYA 1450
Query: 179 Y---------------CATPMVSDIVAVQKIYGAPKGSLGNN----------------IY 207
+ ++ + + + + I
Sbjct: 1451 SNNTGDIFSSPNGIVIPVSALLGNDTDIDGSALSITSVSAGSGAVSGVQFVPGSNDSLIT 1510
Query: 208 KIEVQQKDSPFIQTIYDSGG-----DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
F T+ D G +++ G + S + G ++
Sbjct: 1511 FQTSNGSVGTFSYTVSDGAGGTSTATVTVNVVSTNGGSHVELTGNYQASYLDGGSNGDSL 1570
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL---YKIY 319
++ G + D +IG + N+V +GND DG +G+D + + +
Sbjct: 1571 TGAGAGDTFFGGAAADTLIGGAGNDVLRGGAGNDNLDGGAGIDMLDFSDATGGINFTLVQ 1630
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + D S++E + IL + + G D+
Sbjct: 1631 SSAGTQVNLSSVGLDTDTYSNMEGVIGTKYSDTLTGSAGNDILRGGGGNDIIDGGAGIDL 1690
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSY---DDLRNVFGSDRGAAARHYITHGVKEGRN 436
+ + + IT G D RN+ G A +
Sbjct: 1691 LDFSDATGAIAFTLTQSITNTVVNLTGVGLGSDTYRNMEGVIGSAFNDTLTGSTGNDVLR 1750
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
A D++ A A L F + V +
Sbjct: 1751 GGAGNDTLLGGDGNDMLIGGAGADTLTGGAGSDTFAFLRADAASVDTITDF 1801
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 48/192 (25%), Gaps = 6/192 (3%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ I I + D + + G N + G + I + +++
Sbjct: 3 TLNGTNGIDNITGTASSDTI----LSGNGNDYVSAGAGNDYVDGGNGDDIIEGGSGDDTL 58
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G +G D+V G N+ +G D G SG D + D
Sbjct: 59 LGGNGKDLVFGGLGNDTLLGGNGVDAVYGGSGDDVIGSPGDGTTSAGTDNGGDTLYGDGF 118
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ D L ++ + G DV
Sbjct: 119 DTYADLLLGRGHESLQPGNDRIYGGNGDDLIYGDNGNNAAVG--GNDVIYGGNGNDTIYG 176
Query: 392 SEGRDITFDSYL 403
G D+
Sbjct: 177 EGGNDVIQGGAG 188
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 79/283 (27%), Gaps = 13/283 (4%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ +T S + + N S D + G T++
Sbjct: 1532 TSTATVTVNVVSTNGGSHVELTGNYQASYLDGGSNGDSLTGAGAGDTFFGGAAADTLIGG 1591
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
+ G + G + D + L + S +
Sbjct: 1592 AGNDVLRGGAGNDNLDGGAGIDMLDFSDATGGINFTLVQSSAGTQVNLSSVG-------- 1643
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
D + G + + + I G DLLD + G
Sbjct: 1644 ---LDTDTYSNMEGVIGTKYSDTLTGSAGNDILRGGGGNDIIDGGAGIDLLDFSDATGAI 1700
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ + + + + + + +E V+GS+ ND + G++ N+V +GND G
Sbjct: 1701 AFTLTQSITNTVVNLTGVGLGSDTYRNMEGVIGSAFNDTLTGSTGNDVLRGGAGNDTLLG 1760
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
G D A + + A+ D ++D +
Sbjct: 1761 GDGNDMLIGGAGADTLTGGAGSDTFAFLRADAASVDTITDFDA 1803
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 71/276 (25%), Gaps = 12/276 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G D+LD + G N+ + + + + + + ++ +
Sbjct: 1593 GNDVLRGGAGNDNLDGGAGIDMLDFSDATGGINFTLVQSSAGTQVNLSSVGLDTDTYSNM 1652
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF---ENAI 325
E V+G+ +D + G++ N++ GND+ DG +G+D + + N +
Sbjct: 1653 EGVIGTKYSDTLTGSAGNDILRGGGGNDIIDGGAGIDLLDFSDATGAIAFTLTQSITNTV 1712
Query: 326 IVYDANEHKQDFLSDVE---------RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ D ++E L + L + LI G
Sbjct: 1713 VNLTGVGLGSDTYRNMEGVIGSAFNDTLTGSTGNDVLRGGAGNDTLLGGDGNDMLIGGAG 1772
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D F + D+ + D +
Sbjct: 1773 ADTLTGGAGSDTFAFLRADAASVDTITDFDAKPVASGGDILDLADLLSGMSVTSANAAQF 1832
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ D A
Sbjct: 1833 IHLSEVGGNTVVSVDRDGGGTGAAFQDVAVLQGVVG 1868
Score = 42.9 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 60/248 (24%), Gaps = 46/248 (18%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ + I S NG +++ + D+ G G T+L N +
Sbjct: 12 NITGTASSDTILSGNGNDYVSAGAGNDYVD-GGNGDDIIEGGSGDDTLLGGNGKDLVFGG 70
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
LG NG VYG D S S G+
Sbjct: 71 LGNDTLLGGNGVDAVYGGSGDDVIGSPGDGTTSAGTDNGGDTLYGDGFDTYA-------- 122
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
++ + P IY GDDL+
Sbjct: 123 -------------DLLLGRGHESLQPGNDRIYGGNGDDLIYGDNGNNAAV------GGND 163
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G N TI N+V +G D G G D F Y A
Sbjct: 164 VIYGGNGNDTIYG------------------EGGNDVIQGGAGADTLSGGDGNDVFAYAA 205
Query: 312 PSYLYKIY 319
S
Sbjct: 206 VSDSTAAS 213
Score = 41.3 bits (95), Expect = 0.61, Method: Composition-based stats.
Identities = 22/209 (10%), Positives = 53/209 (25%), Gaps = 20/209 (9%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G + + ++ +D +G D + A + + I+ +
Sbjct: 2 ATLNGTNGIDNITGTASSDTILSGNGND--YVSAGAGNDYVDGGNGDDIIEGGSGDDTLL 59
Query: 338 LSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + L F + + + + + + + +G D
Sbjct: 60 GGNGKDLVFGGLGNDTLLGGNGVDAVYGGSGDDVIGSPGDGTTSAGTDNGGDTLYGDGFD 119
Query: 397 ITFD--------------SYLYLGSYDDLRNVFGSDRGAAARH---YITHGVKEGRNPDA 439
D +Y G+ DDL + A + Y +G
Sbjct: 120 TYADLLLGRGHESLQPGNDRIYGGNGDDLIYGDNGNNAAVGGNDVIYGGNGNDTIYGEGG 179
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKD 468
++ A + L + D
Sbjct: 180 NDVIQGGAGADTLSGGDGNDVFAYAAVSD 208
Score = 39.4 bits (90), Expect = 1.8, Method: Composition-based stats.
Identities = 18/217 (8%), Positives = 44/217 (20%), Gaps = 1/217 (0%)
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + I ++ + N + + + + + L
Sbjct: 4 LNGTNGIDNITGTASSDTILSGNGNDYVSAGAGNDYVDGGNGDDIIEGGSGDDTLLGGNG 63
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ + +G D G D+ S +
Sbjct: 64 KDLVFGGLGNDTLLGGNGVDAVYGGSGDDVIGSPGDGTTSAGTDNGGDTLYGDGFDTYAD 123
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ + Y + +DLI V + G + + +
Sbjct: 124 LLLGRGHESLQPGNDRIYGGNGDDLIYGDNGNNAAVGGNDVIYGGNGNDTIYGEGGNDVI 183
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
G+ D + + A F
Sbjct: 184 QGGAGADTLSGGDGNDVFAYAAVSDSTAASMDVITDF 220
Score = 37.1 bits (84), Expect = 9.8, Method: Composition-based stats.
Identities = 29/254 (11%), Positives = 56/254 (22%), Gaps = 25/254 (9%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ ++ + ++ + A + + G D+ E G+D+
Sbjct: 8 NGIDNITGTASSDTILSGNGNDYVSAGAGNDYVDGGNGDDIIEGGSGDDTLLGGNGKDLV 67
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
F D L G D Y G +P + D +
Sbjct: 68 FGGLG----NDTLLGGNGVDAV-----YGGSGDDVIGSPGDGTTSAGTDNGGDTLYGDGF 118
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
E D G D + AA G
Sbjct: 119 DT------YADLLLGRGHESLQPGNDRIY--GGNGDDLIYGDNGNNAAVG-----GNDVI 165
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYL---TS 575
+ + ++ + G D F+ + + + +
Sbjct: 166 YGGNGNDTIYGEGGNDVIQGGAGADTLSGGDGNDVFAYAAVSDSTAASMDVITDFVRGAD 225
Query: 576 YDDLWNVFGSDRSA 589
+ DL V G
Sbjct: 226 HIDLRPVLGDSGFN 239
>gi|167648121|ref|YP_001685784.1| outer membrane adhesin-like protein [Caulobacter sp. K31]
gi|167350551|gb|ABZ73286.1| outer membrane adhesin like proteiin [Caulobacter sp. K31]
Length = 4687
Score = 90.6 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 54/327 (16%), Positives = 94/327 (28%), Gaps = 19/327 (5%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
DD L N L + I G N T+ + + + G G+D +IG +
Sbjct: 2834 DDYLYGDQNALAPNDNLLGGANRDLIYGRSGNDTLNGGSGDDYLEGDDGDDSLIGGDGVD 2893
Query: 288 VFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G D+ DG +G D+ S ++ + + E+
Sbjct: 2894 RLLGGNGADILDGGAGADSLVGELGDDILIGGSGADRLSGGDGRDSLSGGAENDVLNGDL 2953
Query: 341 VERLRFADQCID-SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ +D +L + L G D +F RD
Sbjct: 2954 GDDTLDGGDGVDQLDGGDGNDLLVGGLGDDSLFGGAGADTMSGGAGADQFTGGADRDTVT 3013
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
+ G L G G A ++ + +L A+++ L +
Sbjct: 3014 YASATSGVIASLTT--GGSAGDALGDTFLDAIEVLVGSNYDDSLTGTATNDTLQGGDGND 3071
Query: 460 PDLVQVGKDHFSNFGCEEGRFV-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
G D ++ F + D LY G D G + Y +G+
Sbjct: 3072 SLHGGDGDDVLEGGAGDDQLFAESGDDRLYGGIGHDTL-----VGGTGSDTYYLNGLSGA 3126
Query: 519 RNPDAFKALEYIASHEDLINAFADAPD 545
+ F + A D+I D
Sbjct: 3127 DDIQNFNSS---AQDIDIIGYLDGDID 3150
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 81/277 (29%), Gaps = 9/277 (3%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ + AD +G ++ + + G + G D
Sbjct: 2897 GGNGADILDGGAGADSLVGELGDDILIGGSGADRLSGGDGRDSLSGGAENDVLNGDLGDD 2956
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP--KGSLGNNIYKIEV 211
D + ++ G + + + GA G +
Sbjct: 2957 TLDGGDGVDQLDGGDGNDLLVGGLGDDSLFGGAGADTMSGGAGADQFTGGADRDTVTYAS 3016
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLI------GGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
T S GD L D L G + T + ++ G + N ++
Sbjct: 3017 ATSGVIASLTTGGSAGDALGDTFLDAIEVLVGSNYDDSLTGTATNDTLQGGDGNDSLHGG 3076
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G +G+D + S ++ + G+D G +G DT++ S I F ++
Sbjct: 3077 DGDDVLEGGAGDDQLFAESGDDRLYGGIGHDTLVGGTGSDTYYLNGLSGADDIQNFNSSA 3136
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
D + D D +L F + ++
Sbjct: 3137 QDIDIIGY-LDGDIDRTKLWFRRSVLADGVTAGNDLI 3172
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/320 (15%), Positives = 81/320 (25%), Gaps = 30/320 (9%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
D +YD D TL DL + + +++
Sbjct: 1955 SLDGANYVALYDQTMTDRAVETLQLADGQTADLTHLRLAGETASVAADFVIGGAGNDTLS 2014
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-------------- 318
G +G+DV+ G + N+ +GNDV +G +G DT A S +
Sbjct: 2015 GLAGDDVMSGGAGNDSLDGGAGNDVLEGGAGADTLNGGADSQTDGLAVSASDPGSYGDTI 2074
Query: 319 -YRFENAIIVYD-------ANEHKQDFLS-------DVERLRFADQ-CIDSVNVKQRSIL 362
Y A +V D + + D + +E + +D + + L
Sbjct: 2075 RYVTSGAGVVIDLATRAASGGDAQGDIIVLGANGFGSIENVLGSDAYGDQLSGDNRANRL 2134
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L G DV +G D L
Sbjct: 2135 SGLGGNDVLDGRAGDDVVVGGAGDDTLYGGDGDDALSGEDGIDRLEGGLGKDVLGGGAGG 2194
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
G D L + L + G D + F
Sbjct: 2195 DMLLGQAGDDLLTGDDGDDVLYGGDGLDTLGGDAGADILYGEAGDDKLVGGDGGDQLFGG 2254
Query: 483 FDSYLYLGSYDDLRNVFGSD 502
+ +G D G+
Sbjct: 2255 DGDDVLVGGTGDDLLDGGAG 2274
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 49/347 (14%), Positives = 90/347 (25%), Gaps = 15/347 (4%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ I + G D + G + + G N ++ +
Sbjct: 1390 SVILGTNGADWIVGTDGADKI----YGLNGDDFGFGGLGNDMVSGDGNNDLVSGGAGDDV 1445
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V+G +GND V+G+ ++ F G D+ G G D A + + R + ++ D
Sbjct: 1446 VIGGAGNDTVLGDGGDDRAFGGLGADILAGGRGDDVVIAGAGDDVIRYARGDGQDVLIDD 1505
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY--EDLIQVIGQDVFESMKHFYE 388
+ D + V + ++ + S + +H
Sbjct: 1506 LVNNWDLVWQNGAYVNGYALNADGTVSKGGVVYFDGSKWLDGFNYDYDDAAKTLKRHMGA 1565
Query: 389 FGLSEGRDITFDS---YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
G + D+ + + D + G+D G G +
Sbjct: 1566 VGGVISANAGIDTLEFAVGVDIQDLMLRRVGTDLEVVVSEVDATGGFSGAADKVTIKDWW 1625
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
A+ A + G D L + + G
Sbjct: 1626 SATT----GAETRPIEKFSFAATGTLALGGYAIIGGATDGADTLTAAATASWITGGGGDD 1681
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G D F L A+ + L D AG D
Sbjct: 1682 LIN--GGTGADILVGGDGFDTLSGGAAGDILYGGAGDDILDGGAGAD 1726
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/320 (12%), Positives = 83/320 (25%), Gaps = 60/320 (18%)
Query: 72 ETSIHSDIKFISSNNG-YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+T+ + ++ + DV G G ++ +
Sbjct: 1983 QTADLTHLRLAGETASVAADFVIGGAGNDTLSGLAGDDVMSGGAGNDSLDGGAGNDVLEG 2042
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD-ASFGYCATPMVSDIV 189
G + + S+ ++ ++D A+ DI+
Sbjct: 2043 GAGADTLNGGADSQTDGLAVSASDPGSYGDTIRYVTSGAGVVIDLATRAASGGDAQGDII 2102
Query: 190 AVQKI-YGAPKGSLGNNIYK----------------IEVQQKDSPFIQTIYDSGGDDLL- 231
+ +G+ + LG++ Y + GDD L
Sbjct: 2103 VLGANGFGSIENVLGSDAYGDQLSGDNRANRLSGLGGNDVLDGRAGDDVVVGGAGDDTLY 2162
Query: 232 --DLTLIGGVKNYIDLNTESW--SSIGGYEKNM--------------------------- 260
D ++ ID +GG
Sbjct: 2163 GGDGDDALSGEDGIDRLEGGLGKDVLGGGAGGDMLLGQAGDDLLTGDDGDDVLYGGDGLD 2222
Query: 261 ---------TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + +VG G D + G ++V +G+D+ DG +G D + + A
Sbjct: 2223 TLGGDAGADILYGEAGDDKLVGGDGGDQLFGGDGDDVLVGGTGDDLLDGGAGGDIYGFDA 2282
Query: 312 PSYLYKIYRFENAIIVYDAN 331
S + +I + +
Sbjct: 2283 NSGVDQIVDAAGVNHIQISG 2302
Score = 39.4 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 81/300 (27%), Gaps = 21/300 (7%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G G+D + G ++ +G D+ +G +G D S + +
Sbjct: 1179 GNDRLYGGKGSDWLKGGEGVDLLVGGAGGDILEGGAGDDQ----GASGAAAVLGGAGSDQ 1234
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D L F + V L S L + +
Sbjct: 1235 YVFGYGDGNDVL-------FDESDPAGVAGSTGDSLNIRVS--QLNAGTLAKNWAGGGSY 1285
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G +G + + + + + G+ + I ++ + I
Sbjct: 1286 EVDGSVKGGEDAIVFGVGVTMQNLIMKRSGTTGAPGSDLIIQLTAEDPIGVLVNGHVRQI 1345
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR-----NVFGS 501
A+ + L + ++ R SY+ + + +
Sbjct: 1346 ATGDSL---TIKDWFESTRKIEWLRFANGDDIRIGDITSYIVGVAGASVILGTNGADWIV 1402
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
A + Y +G G + +++ + D + AG D G ++
Sbjct: 1403 GTDGADKIYGLNGDDFGFGGLGNDMVSGDGNNDLVSGGAGDDVVIGGAGNDTVLGDGGDD 1462
>gi|170739973|ref|YP_001768628.1| 5'-nucleotidase domain-containing protein [Methylobacterium sp.
4-46]
gi|168194247|gb|ACA16194.1| 5'-Nucleotidase domain protein [Methylobacterium sp. 4-46]
Length = 980
Score = 90.6 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 54/313 (17%), Positives = 94/313 (30%), Gaps = 26/313 (8%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGG 255
+ G + I+ G+D L + +++GG + + + ++ G
Sbjct: 658 NSGRFGTGGGDSLAGTAGTDEIFGYAGNDTLAGGQGNDSMLGGDGSDLVSGQDGDDAVLG 717
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N ++ +SV G +G+D+V G+ +++ +GND G +G D F A S L
Sbjct: 718 GAGNDFVSGGAGNDSVNGEAGDDLVFGDEGDDIVDGGAGNDRVYGGTGADRVFGSAGSDL 777
Query: 316 Y--------------KIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQ 358
+ A E D++ E +L +
Sbjct: 778 VFGEQGNDFVGAGEGNDFASGGAGNDEVHGESGDDYVFGDEGDDQLFGGEGRDSLYGGLG 837
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+L+ A + L G DV G D F D L G+D
Sbjct: 838 SDVLDGDAGDDLLAGEQGDDVLMGGAGNDYLSGGLGSDQLFGGDG----ADLLFGNAGND 893
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ R G D + S D+I + G +
Sbjct: 894 SLSGGRGSDIFAYGRGDGQDVIRDFTVGGSERDVIAFNGGVFTSFAAVQAATQQLGADAV 953
Query: 479 RFVTFDSYLYLGS 491
V L L +
Sbjct: 954 ITVGAGDSLTLQN 966
Score = 81.8 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/293 (17%), Positives = 81/293 (27%), Gaps = 22/293 (7%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+Q YG + Y D + + G T
Sbjct: 622 MQARYG-----TADKPYGAVDTASSEDLRIQNLSVRADTVFNSGRFGTGGGDSLAGTAGT 676
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF--- 307
I GY N T+A +S++G G+D+V G ++ +GND G +G D+
Sbjct: 677 DEIFGYAGNDTLAGGQGNDSMLGGDGSDLVSGQDGDDAVLGGAGNDFVSGGAGNDSVNGE 736
Query: 308 ----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID-SVNVKQRSIL 362
+ + VY + F S L F +Q D +
Sbjct: 737 AGDDLVFGDEGDDIVDGGAGNDRVYGGTGADRVFGSAGSDLVFGEQGNDFVGAGEGNDFA 796
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSD 418
A +++ G D + + EGRD + L + DDL D
Sbjct: 797 SGGAGNDEVHGESGDDYVFGDEGDDQLFGGEGRDSLYGGLGSDVLDGDAGDDLLAGEQGD 856
Query: 419 RGAAARH-----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
G + D L A ++ L G
Sbjct: 857 DVLMGGAGNDYLSGGLGSDQLFGGDGADLLFGNAGNDSLSGGRGSDIFAYGRG 909
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/297 (14%), Positives = 83/297 (27%), Gaps = 12/297 (4%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
D F + + + D G G + +
Sbjct: 653 ADTVFNSGRFGTGGGDSLAGTAGTDEIFGYAGNDTLAGGQGNDSMLGGDGSDLVSGQDGD 712
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDND------YENDSFLTSVMSYFMPQDSMMDASFGY 179
+ G G V G D +D + + + D FG
Sbjct: 713 DAVLGGAGNDFVSGGAGNDSVNGEAGDDLVFGDEGDDIVDGGAGNDRVYGGTGADRVFGS 772
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLT 234
+ +V + GA +G+ + + ++ GDD L +
Sbjct: 773 AGSDLVFGEQGNDFV-GAGEGNDFASGGAGNDEVHGESGDDYVFGDEGDDQLFGGEGRDS 831
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L GG+ + + + G + + + + + G G+D + G ++ F ++G
Sbjct: 832 LYGGLGSDVLDGDAGDDLLAGEQGDDVLMGGAGNDYLSGGLGSDQLFGGDGADLLFGNAG 891
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
ND G G D F Y I F D + ++ A Q +
Sbjct: 892 NDSLSGGRGSDIFAYGRGDGQDVIRDFTVGGSERDVIAFNGGVFTSFAAVQAATQQL 948
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/309 (13%), Positives = 73/309 (23%), Gaps = 44/309 (14%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ SS +N+++ TV S G+ G D + G + + F +GND G G D+
Sbjct: 638 TASSEDLRIQNLSVRADTVFNSGRFGTGGGDSLAGTAGTDEIFGYAGNDTLAGGQGNDSM 697
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
D + A
Sbjct: 698 L-------------------------------------GGDGSDLVSGQDGDDAVLGGAG 720
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ + G D EG DI Y + +
Sbjct: 721 NDFVSGGAGNDSVNGEAGDDLVFGDEGDDIVDGGAGNDRVYGGTGADRVFGSAGSDLVFG 780
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
G + A ++++ D G D + + S +
Sbjct: 781 EQGNDFVGAGEGNDFASGGAGNDEVHGESGDDYVFGDEGDDQLFGGEGRDSLYGGLGSDV 840
Query: 488 YLGSYDDLRNVFGSDR----GAAARHYITHGV--KEGRNPDAFKALEYIASHEDLINAFA 541
G D G A Y++ G+ + D L A ++ L
Sbjct: 841 LDGDAGDDLLAGEQGDDVLMGGAGNDYLSGGLGSDQLFGGDGADLLFGNAGNDSLSGGRG 900
Query: 542 DAPDLVQAG 550
G
Sbjct: 901 SDIFAYGRG 909
>gi|302878662|ref|YP_003847226.1| outer membrane adhesin like proteiin [Gallionella capsiferriformans
ES-2]
gi|302581451|gb|ADL55462.1| outer membrane adhesin like proteiin [Gallionella capsiferriformans
ES-2]
Length = 2854
Score = 90.2 bits (222), Expect = 9e-16, Method: Composition-based stats.
Identities = 39/231 (16%), Positives = 69/231 (29%), Gaps = 18/231 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ G+++L D + GG N + G E +
Sbjct: 1681 GGNDVMFGGAGNDMLSGGDGNNVLSGDAGDDQVYGGTANDALFGGTGTDELSGMEGYDRL 1740
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G + +D + G + ++ +GND DG +G DT+ S +
Sbjct: 1741 DGGAGNDLLDGGAQDDALFGGAGDDTLIGGAGNDTLDGGAGNDTYRVD--SQGDVVTENI 1798
Query: 323 NAIIVYDANEHKQDFLSDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQ 373
N + + ++E L D I+ +I+ + L
Sbjct: 1799 NEGVDTVQSVINYTLGDNIENLTLTDPSSGSGQALADINGTGNALDNIITGNSGNNLLNG 1858
Query: 374 VIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
G D F L +G D DS + V G+ AA
Sbjct: 1859 GRGADTLNGGAGNDTYLFNLGDGADTIIDSAMSAAGAGINTLVLGAGITAA 1909
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/316 (13%), Positives = 87/316 (27%), Gaps = 41/316 (12%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+V G++ D+++GN+ N + +G+DV G D + +Y + +V
Sbjct: 1594 ETVTGTADKDLLLGNNGNTIIEAMAGDDVVMSDIGNDMI--DGGAGSDLLYAGDGNDLVI 1651
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
++ ++ L+ G DV
Sbjct: 1652 GGT-----------------GDDVVFAGLGDDVVLGGDGHDALLGEGGNDVMFGGAGNDM 1694
Query: 389 FGLSEGRDITF----DSYLYLGSYDD-LRNVFGSDRGAAARHY----ITHGVKEGRNPDA 439
+G ++ D +Y G+ +D L G+D + Y G
Sbjct: 1695 LSGGDGNNVLSGDAGDDQVYGGTANDALFGGTGTDELSGMEGYDRLDGGAGNDLLDGGAQ 1754
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS---------YLYLG 490
AL A + LI + G D + + + LG
Sbjct: 1755 DDALFGGAGDDTLIGGAGNDTLDGGAGNDTYRVDSQGDVVTENINEGVDTVQSVINYTLG 1814
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+ + G+ +G + + + + L AG
Sbjct: 1815 DNIENLTLTDPSSGSGQALADINGTGNALD----NIITGNSGNNLLNGGRGADTLNGGAG 1870
Query: 551 KDHFSNFGYEEGRSIT 566
D + + +I
Sbjct: 1871 NDTYLFNLGDGADTII 1886
Score = 50.6 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 29/86 (33%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G N + ++G +G D + G++ N +F +GND SG D
Sbjct: 2605 GYAGYDILQGGNGNDALTDSGGNNLLIGGAGADTLTGSTGNELFAGGAGNDTITTGSGAD 2664
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDAN 331
+ + + V
Sbjct: 2665 VIAFNRGDGMDVVNGGVGTDNVVSLG 2690
Score = 44.8 bits (104), Expect = 0.048, Method: Composition-based stats.
Identities = 66/464 (14%), Positives = 111/464 (23%), Gaps = 82/464 (17%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSH 122
+ + T N S DV+ G G+ TI
Sbjct: 2243 ALAIRLTATDTGGLSATTDFNMTVASMITGTSGNDTLFGSYGDDVYLFSAGSGQDTIYDF 2302
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
+ I A GL Y+ + + ++ F
Sbjct: 2303 GGIDTIRLA-GLNPSQVSYARELGNNGWPTYDLVIKVNGTSDSLRIVNYYINPVFQIEKF 2361
Query: 183 PMVSDIVAVQKIYGAP------KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
V D V + S +++ + + SG D +LD
Sbjct: 2362 --VFDDGTVLGTAEMNVSVFNLRASSNDSVVRGGNNGNSNDTYLFGIGSGQDKILDFDNG 2419
Query: 237 GGVKNYIDLNTESWSSIGGYEK----------------------NMTIAQHTVIESVVGS 274
+ LN S + N I IE +V
Sbjct: 2420 IDTVKLVGLNPSQVSYARELDNNGWPTYDLVIKVNGTSDSLRIVNYYINPVYQIEKLVFD 2479
Query: 275 SGN--DVVIGNSANNVFFESSGNDVFDGSSG---LDTFFYYAPSYLYKIYRFENAI---- 325
G N+A S + V G DT+ + S +I F+N I
Sbjct: 2480 DGTVLGTAEMNAAAIDLRGSGNSSVLRGGGNGSINDTYLFGMGSGQDRILDFDNGIDTVK 2539
Query: 326 -------------------------IVYDANEHKQDFLSD--------VERLRFADQCID 352
++ + + +E+L F D +
Sbjct: 2540 LVGLNPSQVSYARELDNNGWPTYDLVIKVNGTSDSLRIVNYYINPVYQIEKLVFDDGTVL 2599
Query: 353 SV---NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
IL+ + L G ++ S G ++ + D
Sbjct: 2600 GSFAFGYAGYDILQGGNGNDALTDSGGNNLLIGGAGADTLTGSTGNEL----FAGGAGND 2655
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
+ G+D A R V G D +L ++ DL
Sbjct: 2656 TITTGSGADVIAFNRGDGMDVVNGGVGTDNVVSLGRGINYADLA 2699
>gi|56708941|ref|YP_164986.1| type I secretion target repeat-containing protein [Ruegeria
pomeroyi DSS-3]
gi|56680626|gb|AAV97291.1| type I secretion target repeat protein [Ruegeria pomeroyi DSS-3]
Length = 1478
Score = 90.2 bits (222), Expect = 9e-16, Method: Composition-based stats.
Identities = 60/385 (15%), Positives = 112/385 (29%), Gaps = 21/385 (5%)
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALG--LMHPGSYNGGYPVYGVDNDYENDSF 158
D D +I I A G + G + D+ ++
Sbjct: 524 SSGTDGDDSLTGDDNPNSIGGLAGNDTISGAGGNDTLSGGPGDDVLNGGAGDDSLRGNAG 583
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
+V +++A+ SD + +Q G+ + +
Sbjct: 584 YDTVDGGADTDTVVVNANSTDVNIIGSSDPITIQ-------SPDGDVVISNVEFVRFLDR 636
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ ++ G + + + G E N T+ + +++ G GND
Sbjct: 637 TMAVSTLATLTTVNTFGGRGDDSMDGDANG--NRLWGREGNDTVNGNGGNDTLNGGLGND 694
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V G + GND DG G DT + S + ++A+ V L
Sbjct: 695 AVNGGEGADQLSGGGGNDTLDGGDGTDTAVFDLTSASASVDGPDDALRVDTGQ--GIVTL 752
Query: 339 SDVERLRFADQCID--SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
++E +RF D+ + + + L T + L G D + E D
Sbjct: 753 RNIEFVRFTDRTFNLTDLQALRDQTLIGTPGNDTLRGSYGNDTILGLDGDDELDGGLDND 812
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
+ D L G D + V + + + ++AF
Sbjct: 813 VLNSGEG----QDTLLGGPGDDLLRVTQTIAPTVVDNTVSNPVSNPMTLPENWS--LDAF 866
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFV 481
D D V + G +E +
Sbjct: 867 GDVADPTTVPHQTLAITGSDETQEA 891
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 48/139 (34%), Gaps = 11/139 (7%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G +DL L N + + + N + + +G D + GN
Sbjct: 157 DYTGGAAIDLALARSGNEDTSGNNPATNDLLWGRGNGSNYFKS-------GNGTDYLYGN 209
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----DANEHKQDFLS 339
N+V GND +G +G D + Y I N I + D L
Sbjct: 210 GGNDVLEGGGGNDSVNGGTGTDRAVFSGNCSDYTITSNANGTITIADNRANSPDGTDTLK 269
Query: 340 DVERLRFADQCIDSVNVKQ 358
DVE RFAD ++ +
Sbjct: 270 DVEYARFADGEMNLTTGEF 288
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 74/292 (25%), Gaps = 33/292 (11%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ + R Y + + AD G G+ I L +
Sbjct: 1192 TGSSSDDYIRGLGDYDWIVATEGADTIDGGNGQDMISF----------LEWQNTDPNTIS 1241
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK-IYGAPKGSL 202
+++ P + AS + A Q YG +
Sbjct: 1242 DAFTPNGAPPTGAQATGVLVNLANPTQNTNLASGLTLVSVERVTGSARQDVFYGDDGQND 1301
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-------VKNYIDLNTESWSSIG- 254
+ + + Y G D + G ++ N + + G
Sbjct: 1302 FRGLGDFDWFVSSDGGRERYYGGDGVDTVTYFNAPGAVTANLRNGAVVNGNESGYGTQGW 1361
Query: 255 -------------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
G + + G G+D + G + +GND DG
Sbjct: 1362 AARDLYFEIENLVGSNFGDHLTGSADRNQLSGLDGDDFLFGFGNIDYLKGGAGNDTIDGG 1421
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
D + Y + R + + D L DVE RF DQ +
Sbjct: 1422 GSSDYALFDGDLVDYTLTRTAENRVTVVGPD-GNDSLIDVEYFRFDDQDVRI 1472
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 45/315 (14%), Positives = 80/315 (25%), Gaps = 29/315 (9%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD-LLDLTLIGGVKNYIDLN 246
++A+ G S ++ S I + D + L I
Sbjct: 914 VLALYDNNGTQITSNDDSSTSNGAGGSTSGRDSFIQHTFAADGTYIIALQRYGGGTISST 973
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ +I + T + G + ND + G ++ G+D G +G DT
Sbjct: 974 QMATLNISATGVTVPPVTTTDANLLDGGADNDTLEGGGGDDTLIGGLGDDSMTGGAGSDT 1033
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCID------------- 352
+ + + DFL SD+E ++F D +
Sbjct: 1034 AILATSQQFVSGQNVTGGVQLT--SSQGVDFLGSDIEFVQFNDGTLTLAQAAALAGTVPS 1091
Query: 353 ----------SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
I+ + + G D + D +
Sbjct: 1092 AINGTNAGEAVDGTTATEIINGLEGADWISPGGGSDTVDGGPGNDMLSFFNLPDTPGRTN 1151
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
L D+ A R I E F +S +D I D +
Sbjct: 1152 LDYRLTIDMGAGTAVSHDGAER--IQFANIERLTGTIFADHITGSSSDDYIRGLGDYDWI 1209
Query: 463 VQVGKDHFSNFGCEE 477
V + G +
Sbjct: 1210 VATEGADTIDGGNGQ 1224
Score = 42.9 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 47/380 (12%), Positives = 103/380 (27%), Gaps = 41/380 (10%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E + I + D+ + T N + +
Sbjct: 1100 EAVDGTTATEIINGLEGADWISPGGGSDTVDGGPGNDMLSFFNLPDTPGRTNLDYRLTID 1159
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+G S++G + + + + ++ D Y D +
Sbjct: 1160 MGAGTAVSHDGAERIQFANIERLTGTIFADHITGSSSDD--------YIRGLGDYDWIVA 1211
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ G G ++ Q P TI D+ + T ++L + +
Sbjct: 1212 TEGADTIDGGNGQDMISFLEWQNTDPN--TISDAFTPNGAPPTGAQATGVLVNLANPTQN 1269
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE----------SSGNDVFDGS 301
+ + +E V GS+ DV G+ N F G + + G
Sbjct: 1270 TNLASGLTL-----VSVERVTGSARQDVFYGDDGQNDFRGLGDFDWFVSSDGGRERYYGG 1324
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------DFLSDVERLRFADQCIDSVN 355
G+DT Y+ A++ + + + D ++E L ++
Sbjct: 1325 DGVDTVTYFNAPGAVTANLRNGAVVNGNESGYGTQGWAARDLYFEIENLVGSNFGDHLTG 1384
Query: 356 VK---------QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
L + + L G D + ++ L +G + +
Sbjct: 1385 SADRNQLSGLDGDDFLFGFGNIDYLKGGAGNDTIDGG-GSSDYALFDGDLVDYTLTRTAE 1443
Query: 407 SYDDLRNVFGSDRGAAARHY 426
+ + G+D ++
Sbjct: 1444 NRVTVVGPDGNDSLIDVEYF 1463
>gi|186684782|ref|YP_001867978.1| hemolysin-type calcium-binding region [Nostoc punctiforme PCC 73102]
gi|186467234|gb|ACC83035.1| Hemolysin-type calcium-binding region [Nostoc punctiforme PCC 73102]
Length = 1597
Score = 90.2 bits (222), Expect = 9e-16, Method: Composition-based stats.
Identities = 84/683 (12%), Positives = 160/683 (23%), Gaps = 117/683 (17%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
+ G T D G G T I +
Sbjct: 917 GNDTLNGLGDNDTLDGGDGNDFLDGGTGNDSLIGGKGNDTYTVDTIGDTIVESASAGTDL 976
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+ V G + + + ++ ++++ + G + G
Sbjct: 977 VKSSVSWVLGNNLENLTLTGTDAINGTGNSLNNILTGNTGANILSGEGGNDTLLGGAGND 1036
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-------------------- 238
G ++ G+D+ + IG
Sbjct: 1037 TLLGG----AGNDTLDGGLGADSLNGGVGNDIYTVDNIGDIIIEGLNAGTDLVNSSVSFV 1092
Query: 239 ---VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+ L G N + +T + G GND + G+S N+ +GN
Sbjct: 1093 LADNVENLTLTGTGAIDGTGNILNNILIGNTGANKLSGGDGNDSLFGSSGNDTLLGGAGN 1152
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS---------DVERLRF 346
D DG G D+ + + I+ + + D + +VE L
Sbjct: 1153 DTLDGGLGADSL--NGGAGNDIYTVDNVSDIIVEGLDAGIDLVKSSVSFVLTDNVENLTL 1210
Query: 347 AD-------------------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
L ++ + L+ G D +
Sbjct: 1211 TGTGAIDGTGNILNNILIGNTGANKLSGGDGNDSLFGSSGNDSLLGGAGDDTLDGGVGID 1270
Query: 388 EFGLSEGRDITFDSYLY---------------------LGSYDDLRNVFGSDRGAAARHY 426
G DI L LG + + GS A +
Sbjct: 1271 TLNGGAGNDIYTVDSLSDMITEGLNAGIDLVKSAVSWTLGENFENLTLTGSGAITATGNS 1330
Query: 427 ITH------GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE---- 476
+ + G D +L + ++ L+ D +G D+ +
Sbjct: 1331 LDNILIGSTGANTLTGGDGNDSLFGSSGNDSLLGGVGDDTLDGGLGADNLNGGVGNDIYT 1390
Query: 477 ---------EGRFVTFD-----SYLYLGSYDDLRNVFGSDRGAAARH------YITHGVK 516
E D L + + G+ A + G
Sbjct: 1391 VDSVSDIIVESLNAGTDLVNSSVSWTLADNFENLTLIGTGAITATGNGLNNILIGNTGAN 1450
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSY 576
D L + ++ L+ + GKD + G S+ T
Sbjct: 1451 TLSGGDGNDNLFGNSGNDSLLGGVGNDSLFGGIGKD--TLTGGAGQDSLYLTDT--RTGG 1506
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKK 636
D F G+ + + + F+ + A ++
Sbjct: 1507 YDTITDFTVGDDTIFISKAEFGLGQAQDTTLDSGLFRLGTIATT-----ASDRFIYNQST 1561
Query: 637 VDLYTDYFGDGNYYDSDLYSMHD 659
+LY D G G + + +
Sbjct: 1562 GNLYFDKDGLGGTTQVQIAQLSN 1584
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/360 (13%), Positives = 83/360 (23%), Gaps = 33/360 (9%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ ++ F TI D G + + + T ++ G
Sbjct: 847 VNNNNGTYTYTPVQNYYGSDSFTYTISDGQGGSSNATVNLTINQFNLINGTSGAETLNGT 906
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
I +++ G ND + G N+ +GND G G DT Y +
Sbjct: 907 VNMDIILGLLGNDTLNGLGDNDTLDGGDGNDFLDGGTGNDSLIGGKGNDT--YTVDTIGD 964
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVI 375
I +A + +++E L I+ +IL L
Sbjct: 965 TIVESASAGTDLVKSSVSWVLGNNLENLTLTGTDAINGTGNSLNNILTGNTGANILSGEG 1024
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D G D + I G+ G
Sbjct: 1025 GNDTLLGGAGNDTLLGGAGNDTL--DGGLGADSLNGGVGNDIYTVDNIGDIIIEGLNAGT 1082
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
+ +A + ++ + G L
Sbjct: 1083 DLVNSSVSFVLADN-----------------VENLTLTGTGAIDGTGNILNNILIGNTGA 1125
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ G D G L A ++ L AG D ++
Sbjct: 1126 NKLSGGD-----------GNDSLFGSSGNDTLLGGAGNDTLDGGLGADSLNGGAGNDIYT 1174
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 77/301 (25%), Gaps = 21/301 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + + D G G + I L
Sbjct: 1237 SGGDGNDSLFGSSGNDSLLGGAGDDTLDGGVGIDTLNGGAGNDIYTVDSLSDMITEGLNA 1296
Query: 135 M----------HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
G + G + L +++ +++
Sbjct: 1297 GIDLVKSAVSWTLGENFENLTLTGSGAITATGNSLDNILIGSTGANTLTGGDGNDSLFGS 1356
Query: 185 VSDIV--------AVQKIYGAPKGS--LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ + GA + +GN+IY ++ + + T
Sbjct: 1357 SGNDSLLGGVGDDTLDGGLGADNLNGGVGNDIYTVDSVSDIIVESLNAGTDLVNSSVSWT 1416
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
L +N + T + ++ G N+ I +T ++ G GND + GNS N+ G
Sbjct: 1417 LADNFENLTLIGTGAITATGNGLNNILI-GNTGANTLSGGDGNDNLFGNSGNDSLLGGVG 1475
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND G G DT A + + D + + F
Sbjct: 1476 NDSLFGGIGKDTLTGGAGQDSLYLTDTRTGGYDTITDFTVGDDTIFISKAEFGLGQAQDT 1535
Query: 355 N 355
Sbjct: 1536 T 1536
>gi|291571482|dbj|BAI93754.1| phosphodiesterase/alkaline phosphatase D [Arthrospira platensis
NIES-39]
Length = 723
Score = 90.2 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 11/172 (6%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
D + Y+A++ D+ A ++ G +HF G + R T +D YL + D+
Sbjct: 6 DFYSESFYLANNPDVAQAV--DLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDV 63
Query: 496 RNVF-GSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ + +H+I G +E RNP F YI + + A +H
Sbjct: 64 AALVNVGAIASGFQHFINFGQRERRNPSILFNTDFYIDEYPFIQAAIEAGDIT---AIEH 120
Query: 554 FSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
F G E S+ +NP+ YL D+ D +HY+ G + R
Sbjct: 121 FVKAGQFEDFRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNR 172
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 64/173 (36%), Gaps = 10/173 (5%)
Query: 399 FDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
+ YL + D+ + H+I G + R P + L Y+ ++ D+
Sbjct: 8 YSESFYLANNPDVAQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAA-- 65
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ G HF NFG E R + F++ Y+ Y ++ + A H++ G
Sbjct: 66 LVNVGAIASGFQHFINFGQRERRNPSILFNTDFYIDEYPFIQAAIEAGDITAIEHFVKAG 125
Query: 515 VKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
E P + Y+A + D+ G +H+ + G + R +
Sbjct: 126 QFEDFRPSVLYNPNYYLARNPDVAARVERDELT---GIEHYLDIGAAQNRDFS 175
Score = 80.2 bits (196), Expect = 9e-13, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 7/148 (4%)
Query: 485 SYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD 542
YL + D+ + H+I G + R P + L Y+ ++ D+
Sbjct: 10 ESFYLANNPDVAQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALV-- 67
Query: 543 APDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
+ +G HF NFG E R+ + FN D Y+ Y + + A +H++ G
Sbjct: 68 NVGAIASGFQHFINFGQRERRNPSILFNTDFYIDEYPFIQAAIEAGDITAIEHFVKAGQF 127
Query: 601 EG-RALGISGMQFKSVMNLSEKSRDKAD 627
E R + + N +R + D
Sbjct: 128 EDFRPSVLYNPNYYLARNPDVAARVERD 155
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 55/284 (19%), Positives = 97/284 (34%), Gaps = 19/284 (6%)
Query: 364 YTASYEDLIQVIGQD-VFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRG 420
Y A+ D+ Q + + +HF E G + R +D YL + D+ +
Sbjct: 13 YLANNPDVAQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALVNVGAI 72
Query: 421 -AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ +H+I G +E RNP F YI + + A +HF G E
Sbjct: 73 ASGFQHFINFGQRERRNPSILFNTDFYIDEYPFIQAAIEAGDIT---AIEHFVKAGQFED 129
Query: 479 --RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
V ++ YL D+ D HY+ G + R+ AF + + +
Sbjct: 130 FRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNRDFSAFLEVNGSSFPNRV 189
Query: 537 INAFADAPDLVQAGKDHFSN-FGYEEGRSITFNP--DLYLTSYDDLW---NVFGSDRSAA 590
+ + ++ +E FN T+ D VF SD +
Sbjct: 190 ASGDTRENSTILMARNTVVGPITFETATDPNFNNVVSSLTTNNSDPTVPVKVFVSDLTPG 249
Query: 591 AQHY--ITHGMKEG-RALGISGMQFKSVMNLSEKSRDKADLSLS 631
++ +T+ M E R + + + S L + + L
Sbjct: 250 TPYFYRVTNAMGESDRGIFRTPLSLGSQGGLRFGAAGDSQGELM 293
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 7/146 (4%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ-VIGQDVFESMKHFYEFGLSEGRDI 397
S E + Q L Y + D+ V + +HF FG E R+
Sbjct: 31 SGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALVNVGAIASGFQHFINFGQRERRNP 90
Query: 398 --TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
F++ Y+ Y ++ + A H++ G E P + Y+A + D+
Sbjct: 91 SILFNTDFYIDEYPFIQAAIEAGDITAIEHFVKAGQFEDFRPSVLYNPNYYLARNPDVAA 150
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRF 480
G +H+ + G + R
Sbjct: 151 RVERDELT---GIEHYLDIGAAQNRD 173
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
D + Y+A++ D+ A ++ +G +HF G + R T ++ YLT+ D+
Sbjct: 6 DFYSESFYLANNPDVAQAV--DLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDV 63
Query: 580 WNVFGSDRSA-AAQHYITHGMKEGRALGI 607
+ A QH+I G +E R I
Sbjct: 64 AALVNVGAIASGFQHFINFGQRERRNPSI 92
>gi|56696501|ref|YP_166858.1| type I secretion target repeat-containing protein [Ruegeria
pomeroyi DSS-3]
gi|56678238|gb|AAV94904.1| type I secretion target repeat protein [Ruegeria pomeroyi DSS-3]
Length = 1003
Score = 90.2 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 90/312 (28%), Gaps = 24/312 (7%)
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL- 202
PV ND+ V + + + D+ G + + ++G +G
Sbjct: 448 NPVVAPRVSTANDTLFGGVGNDLLIGNDGDDSLIGGDESDTLDGGSGADTLFGDNEGITS 507
Query: 203 ----GNNIYKIEV---QQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESW 250
GN++ T+ G D LD +++G + + +
Sbjct: 508 ARADGNDLLFGNDGDDSLIGGGGSDTLDGGSGADTLDGGDGNDSVLGQADDDLVIGGRGN 567
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G T+ +SV+G GND++ G + ++ GND G G D+
Sbjct: 568 DTLDGGSGADTLDGGVDNDSVLGGIGNDILFGQAGDDTLIGGDGNDSILGGIGNDSLR-- 625
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + + + +D L L +
Sbjct: 626 GGNGDDTLSGSDGNDTLI--GDSGRDSLVG------GAGDDSLQGGADADTLVGGTGNDS 677
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G D+ + F L G + D G +D N +D A +Y
Sbjct: 678 FFDGGGDDLVLGSEGDDLFFLGGGHNTIGDFGFDSGLKND-GNQSNNDFVNLAINYNRTS 736
Query: 431 VKEGRNPDAFKA 442
Sbjct: 737 YDAAVLNGDIDP 748
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 46/292 (15%), Positives = 75/292 (25%), Gaps = 33/292 (11%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T +++ G GND++IGN ++ +D DG SG DT F +
Sbjct: 457 TANDTLFGGVGNDLLIGNDGDDSLIGGDESDTLDGGSGADTLF-------------GDNE 503
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ A D L D + L+ + + L G D
Sbjct: 504 GITSARADGNDLLFG------NDGDDSLIGGGGSDTLDGGSGADTLDGGDGNDSVLGQAD 557
Query: 386 FYEFGLSEGRDIT-----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
G D D+ D + G+D + G D
Sbjct: 558 DDLVIGGRGNDTLDGGSGADTLDGGVDNDSVLGGIGNDIL-----FGQAGDDTLIGGDGN 612
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
++ ++ L D G D + L D + G
Sbjct: 613 DSILGGIGNDSLRGGNGDDTLSGSDGNDTLIGDSGRDSLVGGAGDDS-LQGGADADTLVG 671
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G + G + L ++ + I F L G
Sbjct: 672 ---GTGNDSFFDGGGDDLVLGSEGDDLFFLGGGHNTIGDFGFDSGLKNDGNQ 720
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/294 (14%), Positives = 81/294 (27%), Gaps = 42/294 (14%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D T D+ D D+ G +++ + G
Sbjct: 482 GGDESDTLDGGSGADTLFGDNEGITSARADGNDLLFGNDGDDSLIGGGGSDTLDGGSGAD 541
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+G V G +D ++ D++ S
Sbjct: 542 TLDGGDGNDSVLGQADD--------DLVIGGRGNDTLDGGS------------------- 574
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA G + ++ GDD L GG N L S+ G
Sbjct: 575 GADTLDGGVD----NDSVLGGIGNDILFGQAGDDTLI----GGDGNDSILGGIGNDSLRG 626
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ T++ ++++G SG D ++G + ++ + D G +G D+FF
Sbjct: 627 GNGDDTLSGSDGNDTLIGDSGRDSLVGGAGDDSLQGGADADTLVGGTGNDSFFDGG--GD 684
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ E + + H + F + N + +Y
Sbjct: 685 DLVLGSEGDDLFFLGGGHNT-----IGDFGFDSGLKNDGNQSNNDFVNLAINYN 733
Score = 38.2 bits (87), Expect = 4.5, Method: Composition-based stats.
Identities = 58/379 (15%), Positives = 100/379 (26%), Gaps = 59/379 (15%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYI-----------DLNTESWSSIGGYEKNMTIAQHTVIE 269
TI +G D +++ +G + +L I N T+ +
Sbjct: 175 TISGTGLADRINIRYLGDRDGDVVDNLDAMGLNGELPESDDDLIDALGGNDTVESGRGHD 234
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD--TFFYYAPSYLYKIYRFENAIIV 327
+V+G G+D + G + + G D DG G D T Y + + +I N+
Sbjct: 235 TVMGGDGDDSIDGGAGADRLLGGEGADTLDGGIGADPLTPVYQQVTSVNQILDGVNSRPD 294
Query: 328 YDANEHKQD----FLSDVERLRFA----DQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ FLS + D I N R I + AS + I +
Sbjct: 295 FGVTTTTNVTNVQFLSSGNVINGFHIGVDVSISGANSLAREIHSHLASSQVAGARIVLNN 354
Query: 380 FESMK-------------------HFYEFGL-------SEGRDITFDSYLYLGSYDDLRN 413
E+ + EF S GR + + +L
Sbjct: 355 LETTERVTVSIDGQVIDLNTAIASGTVEFDGAGVYVLDSLGRIVGTTDDDSVTMNVELTL 414
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ + G + + A+ VG D
Sbjct: 415 ALKQPLTRLDIDFESLVPSSGTTGAVYALSFDTNPVVAPRVSTANDTLFGGVGNDLLIGN 474
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
++ + D L +FG + G + D L
Sbjct: 475 DGDDS-LIGGDESDTLDGGSGADTLFGDNEGITSA-----------RADGNDLLFGNDGD 522
Query: 534 EDLINAFADAPDLVQAGKD 552
+ LI +G D
Sbjct: 523 DSLIGGGGSDTLDGGSGAD 541
>gi|149928498|ref|ZP_01916731.1| hypothetical protein LMED105_11710 [Limnobacter sp. MED105]
gi|149822777|gb|EDM82031.1| hypothetical protein LMED105_11710 [Limnobacter sp. MED105]
Length = 919
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 56/166 (33%), Gaps = 18/166 (10%)
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
++ + H+ F+ Y + +L +
Sbjct: 605 TNAVVSAVGGSVAKAPDTSHVHYDRSV--------FNWDYYYDKHPELVAK----QIDLV 652
Query: 508 RHYITHGVKEG-RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--S 564
H+ G R F Y A H D++ + PD D + ++GY GR S
Sbjct: 653 AHWGQTGYPAKWRGSLEFDMAFY-AKHPDVVKMWGTNPDAYALVLD-WVSWGYSRGRQGS 710
Query: 565 ITFNPDLYLTSYDDLWNVFG-SDRSAAAQHYITHGMKEGRALGISG 609
F+ YL Y DL FG ++ AA H++ HG EGR
Sbjct: 711 ADFDVTSYLARYPDLQRAFGANNYEAAFIHWLDHGKAEGRDGSPGA 756
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 22/167 (13%)
Query: 365 TASYEDLIQVIGQDVFESMK----HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ ++ +G V ++ H+ F+ Y + +L +
Sbjct: 602 SGGTNAVVSAVGGSVAKAPDTSHVHYDRS--------VFNWDYYYDKHPELVAK----QI 649
Query: 421 AAARHYITHGV-KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
H+ G + R F Y A H D++ + PD + D + ++G GR
Sbjct: 650 DLVAHWGQTGYPAKWRGSLEFDMAFY-AKHPDVVKMWGTNPDAYALVLD-WVSWGYSRGR 707
Query: 480 --FVTFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA 523
FD YL Y DL+ FG++ AA H++ HG EGR+
Sbjct: 708 QGSADFDVTSYLARYPDLQRAFGANNYEAAFIHWLDHGKAEGRDGSP 754
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGR--DITFDSYLYLGSYD 409
+++ A + D++++ G + + +G S GR FD YL Y
Sbjct: 666 GSLEFDMAFY--AKHPDVVKMWGTNPDAYALVLDWVSWGYSRGRQGSADFDVTSYLARYP 723
Query: 410 DLRNVFG-SDRGAAARHYITHGVKEGRNPDAFK 441
DL+ FG ++ AA H++ HG EGR+
Sbjct: 724 DLQRAFGANNYEAAFIHWLDHGKAEGRDGSPGA 756
>gi|1706913|sp|P55127|FRPC_NEIMC RecName: Full=Iron-regulated protein frpC
gi|293963|gb|AAA99902.1| iron-regulated protein [Neisseria meningitidis]
Length = 1829
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 66/458 (14%), Positives = 130/458 (28%), Gaps = 70/458 (15%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 865 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 924
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYEN-----DSFLTSVMSYFMPQDSMMDASFGYCATPM- 184
+ + + ++ DS +V SYF S
Sbjct: 925 KDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 984
Query: 185 VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
V D+ V+++ + + G++ Y+ +Y + GDDLL+ G N
Sbjct: 985 VLDVATVKEL--VQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGN 1038
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ ++ G E N + + +++ G GND + G N+ +GND +G
Sbjct: 1039 DSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGG 1098
Query: 302 SGLDTFFYYAPSYLYKIYRFE-------------------------------------NA 324
SG DT+ + +Y ++
Sbjct: 1099 SGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQ 1158
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVI 375
+ V ++ ++ + F + + V + L S L +
Sbjct: 1159 VTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGL 1218
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D G D +Y G+ +D + + Y +G
Sbjct: 1219 GDDYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDALN 1269
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ L ++ LI + G D +
Sbjct: 1270 GGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 1307
Score = 88.3 bits (217), Expect = 3e-15, Method: Composition-based stats.
Identities = 76/501 (15%), Positives = 144/501 (28%), Gaps = 84/501 (16%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS-----HNALHEIGHAL 132
+ + + I D G G T + + ++ +A
Sbjct: 1263 NGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYAT 1322
Query: 133 GLMHPGSYNGGYPVYGVDND---------YENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
G + G + ++DS +V SYF S
Sbjct: 1323 GRKDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDN 1382
Query: 184 M-VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
V D+ V+++ + + G++ Y+ +Y + GDDLL+ G
Sbjct: 1383 GKVLDVATVKEL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDA 1436
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
N + ++ G E N + + +++ G GND + G N+ +GND +
Sbjct: 1437 GNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLE 1496
Query: 300 GSSGLDTFFYYAPSYLYKIYRFE------------------------------------- 322
G SG DT+ + +Y ++
Sbjct: 1497 GGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGS 1556
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQ 373
+ V ++ ++ + F + + V + L S L
Sbjct: 1557 GQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGNTLNG 1616
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+G D G D +Y G+ +D N + Y +G
Sbjct: 1617 GLGDDYLYGADGDDLLNGDAGND-----SIYSGNGNDTLNGGEGNDAL----YGYNGNDV 1667
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+ L ++ LI + G D + FG G+ ++ ++
Sbjct: 1668 LNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV-FGKGFGQDTVYN--YHVDKNS 1724
Query: 494 DLRNVFGSDRGAAARHYITHG 514
D AA H+I G
Sbjct: 1725 DTM--HFKGFKAADVHFIRSG 1743
Score = 84.1 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 61/483 (12%), Positives = 110/483 (22%), Gaps = 54/483 (11%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D+ + + D G G + +N + G H +G + G +
Sbjct: 1033 NGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGN 1092
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ S +Y + D + Y DI+ + + G +
Sbjct: 1093 DYLEGGSGSD-TYVFGKGFGQDTVYNYDYATGRKDII---------RFTDGITADMLTFT 1142
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
++ + + D G + I +
Sbjct: 1143 REGNHLLIKAKDGSGQVTVQSYFQNDGS-----GAYRIDEIHFDNGKVLDVATVKELVQQ 1197
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ G+D + + N G+D G+ G D + IY +
Sbjct: 1198 STDGSDRLYAYQSGNTLNGGLGDDYLYGADGDD--LLNGDAGNDSIYSGNGNDTL----- 1250
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE--FG 390
D + L + + L + LI G D E FG
Sbjct: 1251 ---DGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 1307
Query: 391 LSEGRDITFDSYLYLGS---------------------YDDLRNVFGSDRGAAARHYITH 429
G+D ++ G L + Y +
Sbjct: 1308 KGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQN 1367
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
D + + + G D YLY
Sbjct: 1368 DGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGSTLNGGLG--DDYLYG 1425
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
DDL N Y +G + AL ++ L + +
Sbjct: 1426 ADGDDLLN----GDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGED 1481
Query: 550 GKD 552
G D
Sbjct: 1482 GND 1484
>gi|284050953|ref|ZP_06381163.1| phosphodiesterase/alkaline phosphatase D-like protein [Arthrospira
platensis str. Paraca]
Length = 723
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 11/172 (6%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
D + Y+A++ D+ A ++ G +HF G + R T +D YL + D+
Sbjct: 6 DFYSESFYLANNPDVAQAV--DLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDV 63
Query: 496 RNVF-GSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ + +H+I G +E RNP F YI + + A +H
Sbjct: 64 AALVNVGAIASGFQHFINFGQRERRNPSILFNTDFYIDEYPFIQAAIEAGDIT---AIEH 120
Query: 554 FSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
F G E S+ +NP+ YL D+ D +HY+ G + R
Sbjct: 121 FVKAGQFEDFRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNR 172
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 64/173 (36%), Gaps = 10/173 (5%)
Query: 399 FDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
+ YL + D+ + H+I G + R P + L Y+ ++ D+
Sbjct: 8 YSESFYLANNPDVAQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAA-- 65
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ G HF NFG E R + F++ Y+ Y ++ + A H++ G
Sbjct: 66 LVNVGAIASGFQHFINFGQRERRNPSILFNTDFYIDEYPFIQAAIEAGDITAIEHFVKAG 125
Query: 515 VKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
E P + Y+A + D+ G +H+ + G + R +
Sbjct: 126 QFEDFRPSVLYNPNYYLARNPDVAARVERDELT---GIEHYLDIGAAQNRDFS 175
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 7/148 (4%)
Query: 485 SYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD 542
YL + D+ + H+I G + R P + L Y+ ++ D+
Sbjct: 10 ESFYLANNPDVAQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALV-- 67
Query: 543 APDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
+ +G HF NFG E R+ + FN D Y+ Y + + A +H++ G
Sbjct: 68 NVGAIASGFQHFINFGQRERRNPSILFNTDFYIDEYPFIQAAIEAGDITAIEHFVKAGQF 127
Query: 601 EG-RALGISGMQFKSVMNLSEKSRDKAD 627
E R + + N +R + D
Sbjct: 128 EDFRPSVLYNPNYYLARNPDVAARVERD 155
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 55/284 (19%), Positives = 96/284 (33%), Gaps = 19/284 (6%)
Query: 364 YTASYEDLIQVIGQD-VFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRG 420
Y A+ D+ Q + + +HF E G + R +D YL + D+ +
Sbjct: 13 YLANNPDVAQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALVNVGAI 72
Query: 421 -AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ +H+I G +E RNP F YI + + A +HF G E
Sbjct: 73 ASGFQHFINFGQRERRNPSILFNTDFYIDEYPFIQAAIEAGDIT---AIEHFVKAGQFED 129
Query: 479 --RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
V ++ YL D+ D HY+ G + R+ AF + +
Sbjct: 130 FRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNRDFSAFLEVNGSNFPNRV 189
Query: 537 INAFADAPDLVQAGKDHFSN-FGYEEGRSITFNP--DLYLTSYDDLW---NVFGSDRSAA 590
+ + ++ +E FN T+ D VF SD +
Sbjct: 190 ASGDTRENSTILMARNTVVGPITFETATDPNFNNVVSSLTTNNSDPTVPVKVFVSDLTPG 249
Query: 591 AQHY--ITHGMKEG-RALGISGMQFKSVMNLSEKSRDKADLSLS 631
++ +T+ M E R + + + S L + + L
Sbjct: 250 TPYFYRVTNAMGESDRGIFRTPLSLGSQGGLRFGAAGDSQGELM 293
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 7/146 (4%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ-VIGQDVFESMKHFYEFGLSEGRDI 397
S E + Q L Y + D+ V + +HF FG E R+
Sbjct: 31 SGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALVNVGAIASGFQHFINFGQRERRNP 90
Query: 398 --TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
F++ Y+ Y ++ + A H++ G E P + Y+A + D+
Sbjct: 91 SILFNTDFYIDEYPFIQAAIEAGDITAIEHFVKAGQFEDFRPSVLYNPNYYLARNPDVAA 150
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRF 480
G +H+ + G + R
Sbjct: 151 RVERDELT---GIEHYLDIGAAQNRD 173
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
D + Y+A++ D+ A ++ +G +HF G + R T ++ YLT+ D+
Sbjct: 6 DFYSESFYLANNPDVAQAV--DLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDV 63
Query: 580 WNVFGSDRSA-AAQHYITHGMKEGRALGI 607
+ A QH+I G +E R I
Sbjct: 64 AALVNVGAIASGFQHFINFGQRERRNPSI 92
>gi|238757394|ref|ZP_04618580.1| Metalloprotease [Yersinia aldovae ATCC 35236]
gi|238704433|gb|EEP96964.1| Metalloprotease [Yersinia aldovae ATCC 35236]
Length = 206
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+ I+D+ G+D LD + + IDL +S GG N++IA +T IE+ +G SG+
Sbjct: 8 IVHCIWDADGNDTLDFSGYSVDQ-IIDLRPGHFSCTGGLYYNVSIAFNTFIENAIGGSGD 66
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLD 305
D + GN NN SGND +G +G D
Sbjct: 67 DYLKGNKGNNTLKGESGNDELEGGAGAD 94
Score = 40.9 bits (94), Expect = 0.67, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 23/101 (22%), Gaps = 7/101 (6%)
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ G DT + S I + + F +++
Sbjct: 12 IWDADGNDTLDFSGYSVDQIIDLRPGHFSCTGGLYYNV-------SIAFNTFIENAIGGS 64
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
L+ L G D E + G DI
Sbjct: 65 GDDYLKGNKGNNTLKGESGNDELEGGAGADDLWGGNGYDIY 105
>gi|254510968|ref|ZP_05123035.1| hemolysin-type calcium-binding protein [Rhodobacteraceae bacterium
KLH11]
gi|221534679|gb|EEE37667.1| hemolysin-type calcium-binding protein [Rhodobacteraceae bacterium
KLH11]
Length = 4932
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/387 (13%), Positives = 104/387 (26%), Gaps = 42/387 (10%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL---------TLIGGVKNY 242
I G + ++ + + G D + G+
Sbjct: 2618 DFISGGQGDDTIDAGDGEDLIALGAGGFDQVDGGEGVDTVSFLQESRVGVFASTSGIIRD 2677
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+LN E+ + +E + I+ + G + + + G N+ F G+DV G +
Sbjct: 2678 FNLNPETGDRLSTFENIENLEGTDFIDRLTGDNEVNQLAGAGGNDDLFGEGGDDVLIGGA 2737
Query: 303 GLDTFFYYAPSYLY------KIYRFENAII-----------VYDANEHKQDFLSDVERLR 345
G D S I + ++ + + D D+E L
Sbjct: 2738 GADRLSGGLGSDTASYGDRVAILDADGNVVDDSRASGVTANLTTGFNTEGDIFEDIENLS 2797
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLY 404
D + + L +DL + G D E D +++
Sbjct: 2798 GTAFEDDLTGDGEANALSGGEGNDDLQGLAGNDFLIGGTGVDTLDGGEDSDTVSYNDGRR 2857
Query: 405 LGSYDDLRNVFGSD---RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
G DLR +D + ++ E + L +A ++ + +
Sbjct: 2858 TGVNVDLRTGENTDNDTLVSIENVVGSNAQDELYGDNLANVLTGLAGNDVIHGNDGNDIL 2917
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
+ G D ++ D+ + G D G G R
Sbjct: 2918 IGNSGADELVGGEGDDSLIGDDDNDILQGDAGDDVLAGGD------------GDDTLRGG 2965
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQ 548
D L ++ LI
Sbjct: 2966 DDNDVLVGGEGNDILIGGEGIDTASYA 2992
Score = 84.5 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 81/304 (26%), Gaps = 32/304 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
G + + I AD G+G T + + + G
Sbjct: 2717 GAGGNDDLFGEGGDDVLIGGAGADRLSGGLGSDTASYGDRVAIL-----------DADGN 2765
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
V + T + + + + S + D A G
Sbjct: 2766 VVDDSRASGVTANLTTGFNTEGDIFEDIENLSGTAFEDDLTGDGEANALSGG-------- 2817
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + + G D LD +Y D + +N
Sbjct: 2818 ---EGNDDLQGLAGNDFLIGGTGVDTLDGGEDSDTVSYNDGRRTGVNVDLRTGENTDNDT 2874
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE+VVGS+ D + G++ NV +GNDV G+ G D S ++ E
Sbjct: 2875 LVSIENVVGSNAQDELYGDNLANVLTGLAGNDVIHGNDGNDILI--GNSGADELVGGEGD 2932
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ +++ L+ L + L+ G D+ +
Sbjct: 2933 DSLIGDDDND--------ILQGDAGDDVLAGGDGDDTLRGGDDNDVLVGGEGNDILIGGE 2984
Query: 385 HFYE 388
Sbjct: 2985 GIDT 2988
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/359 (14%), Positives = 96/359 (26%), Gaps = 38/359 (10%)
Query: 230 LLDLTLIGGVKNYID--LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+D+ I+ + G ++N + + + G G D + G ++
Sbjct: 2568 TIDVLNAQATFTGIEDVSGGSGDDILSGDDQNNALFGQAGDDRINGRDGADFISGGQGDD 2627
Query: 288 VFFESSGNDVF----------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD- 336
G D+ DG G+DT + S + I ++ N D
Sbjct: 2628 TIDAGDGEDLIALGAGGFDQVDGGEGVDTVSFLQESRVGVFASTSGIIRDFNLNPETGDR 2687
Query: 337 --FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
++E L D + + L +DL G DV G
Sbjct: 2688 LSTFENIENLEGTDFIDRLTGDNEVNQLAGAGGNDDLFGEGGDDVLIGGAGADRLSGGLG 2747
Query: 395 RDI------------------TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + + N G T +
Sbjct: 2748 SDTASYGDRVAILDADGNVVDDSRASGVTANLTTGFNTEGDIFEDIENLSGTAFEDDLTG 2807
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
AL ++DL + + G D G E+ V+++ G DLR
Sbjct: 2808 DGEANALSGGEGNDDLQGLAGNDFLIGGTGVDTLD--GGEDSDTVSYNDGRRTGVNVDLR 2865
Query: 497 NVFGSDRGAAARHYITHG---VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+D G E + L +A ++ + + + +G D
Sbjct: 2866 TGENTDNDTLVSIENVVGSNAQDELYGDNLANVLTGLAGNDVIHGNDGNDILIGNSGAD 2924
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/354 (13%), Positives = 103/354 (29%), Gaps = 26/354 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + E S + ++ DDL+ + +GG N + + +++ G
Sbjct: 3119 SDTVSYAEETASVSVNLAANSNNQNDDLIGIENLVGGSANDLLTGDDENNALTGGAGADV 3178
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + + G +G D + G +++ G D DG +G DT + + + I
Sbjct: 3179 LRGLSGADVLSGGTGEDDLRGGEGDDLLVGGEGADRLDGGAGSDTASFVSETTAVTIDLT 3238
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D L +E + ++ D + L ++L G D
Sbjct: 3239 QEE-------ASTGDILVSIENIEGTNEADDIRGDGGNNTLYGLDGDDNLFGRTGNDRLF 3291
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+G D+ D +R G D +
Sbjct: 3292 GGDGEDFIDAGDGDDLI----SGGEDADVIRGGEGIDGVTYEVNSA---------GITAD 3338
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
+ S D +++ + ++ + ++ D L + G+
Sbjct: 3339 LDTGVVSDGDTLSSIEN---VIGSNFSDTISGTNDDNVLTGLDGNDVLDGRGGDDVLRGN 3395
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ R G + LE + + L + G D +
Sbjct: 3396 EGDDTLR--GGQGADVLIGGEGDDLLEGGSESDLLRADSGTDTLVGGQGDDVYV 3447
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 72/255 (28%), Gaps = 27/255 (10%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ I+ GGDD L L G + ID I G + I +
Sbjct: 2081 DDYINGGAGDDEIFGFGGDDTL---LGGEGDDTIDGGAG-DDYINGGTGDDYILGGDDND 2136
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+++G +GND + G + +++ + GND G G D ++ + I+
Sbjct: 2137 TLIGGAGNDFIDGGNGDDILLGNIGNDELFGGLGDDQL--SGGRGADQLSGGADNDILDG 2194
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+L + G D +S+
Sbjct: 2195 GI-----------------GNDILDGGTGDDLLILGTGNDIATGGTGSDRVQSILGINVI 2237
Query: 390 GLSEGRDITFDSYLYLGSYDDL----RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
+G + L +++ G+ ++ Y + +
Sbjct: 2238 DGDDGGTSDPNDRDTLDLRENVQLSFVPGVGAGLALSSPGYTVDIEDGALSNNLDALSFA 2297
Query: 446 IASHEDLINAFADAP 460
A+ D + + D
Sbjct: 2298 PAAFGDALTSTIDND 2312
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 80/295 (27%), Gaps = 24/295 (8%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + DL S ++ + + + G +G+D + G ++ G+D
Sbjct: 2053 GTNPDGDDLRVAIIDSTSIGQR---LEGRNADDYINGGAGDDEIFGFGGDDTLLGGEGDD 2109
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
DG +G D + + I ++ + + + + +
Sbjct: 2110 TIDGGAGDD--YINGGTGDDYILGGDDNDTLIGGAGND--------FIDGGNGDDILLGN 2159
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----TFDSYLYLGSYDDLR 412
L + L G D G DI T D L LG+ +D+
Sbjct: 2160 IGNDELFGGLGDDQLSGGRGADQLSGGADNDILDGGIGNDILDGGTGDDLLILGTGNDIA 2219
Query: 413 N-VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
GSDR + +G D ++ + + ++
Sbjct: 2220 TGGTGSDRVQSILGINVIDGDDGGTSDPNDRDTLDLRENVQLSFVPGVGAGLALSSPGYT 2279
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
+ D+ + FG + + + R DA
Sbjct: 2280 VDIEDGALSNNLDALSFA------PAAFGDALTSTIDNDDGLLHRSYRAFDANDE 2328
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 93/290 (32%), Gaps = 20/290 (6%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + ++ G + N T A + + G G D+++GNS N+V + G+D SG
Sbjct: 4088 IAGDGDDTLRGDDGNNTFAGGAGNDLLEGRDGADLLLGNSGNDVLYGGLGDDTLVAESGD 4147
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D + + +++ + ++ + E + F+D V+V+Q
Sbjct: 4148 DELHGGEGDDTFIVQSTSGNVLISELFSDAENGAAANEII-FSDVDHRDVDVRQD----- 4201
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+D + + V +++++ + ++D + +
Sbjct: 4202 ---GDDAVFELDGSVLARVENWFAAAQPTSGLFAAFQFAGGARFEDPASFVNQQINGQSG 4258
Query: 425 HYITHGVKEGRNPDAFKALEY-----IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
++ ++ F A + ++ ++ D+ G +
Sbjct: 4259 QSLSAISGTDQSDRIFAAESGSRITTLDGNDIVVGGDGSDTIDTGNASDNVIGGGGSDSV 4318
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
+ + +++ + D G Y G + D L
Sbjct: 4319 TLGVGADVFIDAQD------GQTETGRDTVYGGDGNDSILSVDGADELFG 4362
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/223 (15%), Positives = 65/223 (29%), Gaps = 14/223 (6%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
++AD R G T+ + + G +G + D D +
Sbjct: 3256 GTNEADDIRGDGGNNTLYGLDGDDNLFGRTGNDRLFGGDGEDFIDAGDGDDLISGGEDAD 3315
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI 222
+ + D V + S F TI
Sbjct: 3316 VIRGGEGIDGVTYEVNSAGITADLDTGVV----------SDGDTLSSIENVIGSNFSDTI 3365
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ D++L G N + + G E + T+ + ++G G+D++ G
Sbjct: 3366 SGTNDDNVLT----GLDGNDVLDGRGGDDVLRGNEGDDTLRGGQGADVLIGGEGDDLLEG 3421
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
S +++ SG D G G D + + S I +
Sbjct: 3422 GSESDLLRADSGTDTLVGGQGDDVYVIGSNSVETVIRAGDGTD 3464
Score = 40.2 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 2/113 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D + N I+ I G N + + + G +G+D++ G +
Sbjct: 4675 GSDAGEFIQADNGNNTIN-GLGGNDEILGLGGNDQLQGDNGADLLDGGAGDDLLFGGDDD 4733
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-AIIVYDANEHKQDFL 338
+ ++G D+ DG G DT S + F++ +V D E Q L
Sbjct: 4734 DRLIATAGTDIVDGERGDDTIVIGRDSRDTIVRDFQDQNTLVLDGIEQDQATL 4786
Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 48/369 (13%), Positives = 90/369 (24%), Gaps = 53/369 (14%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++V+G + N + + GN+ + A + ++
Sbjct: 2509 DTVLGDTINARAFTDGTALILVTEDGNEFYRFDVDELRKQQDASEASQAEITINDFYLLT 2568
Query: 329 DANEHKQDFLSDVE---------RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ Q + +E L DQ + + + G D
Sbjct: 2569 IDVLNAQATFTGIEDVSGGSGDDILSGDDQNNALFGQAGDDRINGRDGADFISGGQGDDT 2628
Query: 380 FESMK----------HFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARH 425
++ F + EG D S + F + R
Sbjct: 2629 IDAGDGEDLIALGAGGFDQVDGGEGVDTVSFLQESRVGVFASTSGIIRDFNLNPETGDRL 2688
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
++ D L L A + + G D + S
Sbjct: 2689 STFENIENLEGTDFIDRLTGDNEVNQLAGAGGNDDLFGEGGDDVLIGGAGADRLSGGLGS 2748
Query: 486 YLYLGSYDDLRNVFGSD------------RGAAARHYITHG----VKEGRNPDAF----- 524
SY D + +D + T G E + AF
Sbjct: 2749 D--TASYGDRVAILDADGNVVDDSRASGVTANLTTGFNTEGDIFEDIENLSGTAFEDDLT 2806
Query: 525 -----KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDL 579
AL ++DL + + G D + G E+ ++++N DL
Sbjct: 2807 GDGEANALSGGEGNDDLQGLAGNDFLIGGTGVD--TLDGGEDSDTVSYNDGRRTGVNVDL 2864
Query: 580 WNVFGSDRS 588
+D
Sbjct: 2865 RTGENTDND 2873
>gi|126741108|ref|ZP_01756790.1| Neutral zinc metallopeptidase [Roseobacter sp. SK209-2-6]
gi|126717872|gb|EBA14592.1| Neutral zinc metallopeptidase [Roseobacter sp. SK209-2-6]
Length = 284
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
+ + +A+ L + + +++++ +I+ L Q++ARWA W V ++
Sbjct: 152 SLDDLANFLTHGYW---GGSSRSFNTSGSNQITVNISGLTAAGQQLARWAFEAWEAVANI 208
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW--RYGIGKGTILSHNALH 126
F ET + I F +++G + + + + W G + +H
Sbjct: 209 DFVETLGSAQITFDDNDSGAYASSSTSGTTILSSEVNVSTAWLANSGTTIDSYSFSTYVH 268
Query: 127 EIGHALGLMHPGSYN 141
EIGHALGL H G YN
Sbjct: 269 EIGHALGLGHQGDYN 283
>gi|7107462|gb|AAF36415.1| rhizobiocin RzcA [Rhizobium leguminosarum bv. trifolii]
Length = 4163
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/344 (15%), Positives = 102/344 (29%), Gaps = 37/344 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL------HEIGHAL--GLMH 136
T S I D + G G + E G ++H
Sbjct: 3789 GTAGNDTLTGTSGNDTFIGGTGDDRFNSGAGSDVYIYAKGDGNDYIDDESGSTTETDVLH 3848
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+ N + + + + + + + + A +G +++I
Sbjct: 3849 LTNLNVSDVSFARVGVHSVMTVIETGQTVTLDEQFYNTAYWG------------LERIEF 3896
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A + + + +T+ + G+D L +I G
Sbjct: 3897 ADGTVWDRAQIQAASWIRGTVAGETLAGTTGNDTLS-------------GGGGNDTINGV 3943
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY-YAPSYL 315
N T+ +++ G GND G + +++ + G D FDG G DT + Y +
Sbjct: 3944 AGNDTLYGDPGNDTLNGGDGNDAHFGGAGDDLLIGNLGVDTFDGGDGNDTLDFSYYTTAS 4003
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ I + DA+ +Q + +E + D + L+ A + +
Sbjct: 4004 HTIDLAAGLVTFSDASPAEQ--IVSIENVVGGSGVNDIRGSLADNKLDGGAGNDVISGND 4061
Query: 376 GQDVFESMKHFYEFGLSEGRD-ITFDSYLYLGSYDDLRNVFGSD 418
G D+ G D F + + D SD
Sbjct: 4062 GNDILIGGSGDDTLTGGSGNDAFVFRAGFGKDTVTDFVAGVASD 4105
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 72/242 (29%), Gaps = 15/242 (6%)
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
++ + + + D G + + G G+ + +
Sbjct: 3915 GTVAGETLAGTTGNDTLSGGGGNDTINGVAGNDTLYGDPGNDTLNGG-DGNDAHFGGAGD 3973
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE--------------SWSSIGGY 256
+ + T G+D LD + + IDL S ++ G
Sbjct: 3974 DLLIGNLGVDTFDGGDGNDTLDFSYYTTASHTIDLAAGLVTFSDASPAEQIVSIENVVGG 4033
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
I + G +GNDV+ GN N++ SG+D G SG D F + A
Sbjct: 4034 SGVNDIRGSLADNKLDGGAGNDVISGNDGNDILIGGSGDDTLTGGSGNDAFVFRAGFGKD 4093
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ F + D + +D + A + + + + + +
Sbjct: 4094 TVTDFVAGVASDDFIDVNTSVFADFASVMAAATQVGADTLITHNSSNIITLKNVALTSLH 4153
Query: 377 QD 378
D
Sbjct: 4154 HD 4155
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 44/335 (13%), Positives = 90/335 (26%), Gaps = 22/335 (6%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ TI + +++ G GND++ + GNDV DG D+++Y
Sbjct: 2215 TSGDDTINGFELDDTINGGGGNDIINAGKGADSITGGRGNDVIDGGGWSDSYYYSRGDGN 2274
Query: 316 YKI-----YRFENAIIVYDANEHKQDFLSDVERLRF-----ADQCIDSVNVKQRSILEYT 365
I + + D N + + + L A D +V + ++
Sbjct: 2275 DTIVDGDWSGGSDRLFFKDVNSSEVSLVRNGNSLLIVIAESAPGVGDGGSVLLKDTIDGF 2334
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ S F +++ D+ D L G D
Sbjct: 2335 YERGIETISFADGISWSRDVFVPMVINQQGTPGNDTITGSNIADTLAGGKGDDTINGGGG 2394
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
Y T+ G D ++ + + L+ + ++ + + E D
Sbjct: 2395 YDTYVYARGDGNDTMFDGDWSGNGDRLLFVDINPGNISLLRHGNSLKILIAETAPGAGDG 2454
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKE---------GRNPDAFKALEYIASHEDL 536
L D + F + + + L
Sbjct: 2455 GSILFQ--DTVDGFYEKGFETIQFANGTVWTNDQVRQMLVDQATTAGNDTITGTGRGDTL 2512
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
+ D G D + + ++ F+ D
Sbjct: 2513 RGSAGDDTLNGGGGGDAYVYARGDGNDTM-FDGDW 2546
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 58/425 (13%), Positives = 108/425 (25%), Gaps = 64/425 (15%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE- 269
+ + + T + N+ W + T I+
Sbjct: 3724 TDLNAADVFLSRAGGHSIVTVVETGHTITFDEQFYNSAYWGLEKIEFADGTTWDRAQIQA 3783
Query: 270 --SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI-- 325
+ G++GND + G S N+ F +G+D F+ +G D + Y I +
Sbjct: 3784 ASWLRGTAGNDTLTGTSGNDTFIGGTGDDRFNSGAGSDVYIYAKGDGNDYIDDESGSTTE 3843
Query: 326 --------------------------------IVYDANEHKQDFLSDVERLRFADQCI-D 352
V + +ER+ FAD + D
Sbjct: 3844 TDVLHLTNLNVSDVSFARVGVHSVMTVIETGQTVTLDEQFYNTAYWGLERIEFADGTVWD 3903
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
++ S + T + E L G D G D Y D
Sbjct: 3904 RAQIQAASWIRGTVAGETLAGTTGNDTLSGGGGNDTINGVAGNDTL---------YGDPG 3954
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
N + H+ G + ++ L ++
Sbjct: 3955 NDTLNGGDGNDAHFGGAGDDLLIGNLGVDTFDGGDGNDTLDFSYYTTASHTIDLAAGLVT 4014
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
F + + + + +D + G +
Sbjct: 4015 FSDASP------AEQIVSIENVVGGSGVNDIRGSLADNKLDG------GAGNDVISGNDG 4062
Query: 533 HEDLINAFADAPDLVQAGKDHFS-NFGYEEGRSITF----NPDLYLTSYDDLWNVFGSDR 587
++ LI D +G D F G+ + F D ++ ++ F S
Sbjct: 4063 NDILIGGSGDDTLTGGSGNDAFVFRAGFGKDTVTDFVAGVASDDFIDVNTSVFADFASVM 4122
Query: 588 SAAAQ 592
+AA Q
Sbjct: 4123 AAATQ 4127
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 53/196 (27%), Gaps = 49/196 (25%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI----- 325
+ ++GND + G++ ++ F GNDV +G G DT+ Y +
Sbjct: 2758 IQATAGNDSIDGSNGDDTFEGGLGNDVLNGLGGNDTYRYSRGDGADTVIEGSAGGADDRL 2817
Query: 326 -------IVYDANEHKQDFLS--------------------------DVERLRFADQC-- 350
+ + D VE + FAD
Sbjct: 2818 VFTNINSTEVSLSRNGTDLTITIPKSTPTVNDAGSVLLRAALDGDQGGVETVVFADGVEW 2877
Query: 351 ---------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ +V+ + +S +D+ +G D + + G +
Sbjct: 2878 TKNDIRVKLLGAVSTTGNDTITGFSSGDDITGGLGNDTINGAGGNDVYHYARGDGNDVIT 2937
Query: 402 YLYLGSYDDLRNVFGS 417
D G
Sbjct: 2938 EAIANGMADTLAFNGI 2953
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 37/235 (15%), Positives = 62/235 (26%), Gaps = 60/235 (25%)
Query: 256 YEKNMTIAQHTVIESVVGSS---GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ +IA + + +V+ G DV+ G ++V +GND G +G DT+ +
Sbjct: 1924 TSGDQSIAWYQIATTVIAGQKTDGADVIEGFDIDDVLDGGAGNDTLYGYNGNDTYVWGRG 1983
Query: 313 SYLYKIYRFENA-------------------IIVYDANEHKQD----------FLSDVE- 342
+I IV D L+ +E
Sbjct: 1984 YGNDQIQERGAGALNGGDYDKIIFHDYVSADDIVLSRTPGASDIIITLKDTGETLTLIEQ 2043
Query: 343 --------------RLRFADQCI-----------DSVNVKQRSILEYTASYEDLIQVIGQ 377
+ F+D I + + L G
Sbjct: 2044 VSYNAINYRPDQVDEIHFSDGVIWYASDIRAHYLLDAKTDGDDHIYGFWTNNTLDGGAGN 2103
Query: 378 DVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
D+ E FG G D ++Y + DD F + G
Sbjct: 2104 DILEGGDGSDTYVFGYGYGHDEIQENYGIVTYDDDDAVRFAXGVDLDDVTFQRSG 2158
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 63/220 (28%), Gaps = 53/220 (24%)
Query: 221 TIYDSGGDDLL---DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---------I 268
T+ +G D + + + G I L G + A T I
Sbjct: 3355 TLVRNGNDVTVLVAESAVGAGNAGSITLKASLQDYYGRGVDAIVFADGTTWSRADMIAHI 3414
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI--- 325
V G++GN+ + G+S + +GND G +G DT+FY A + +
Sbjct: 3415 AYVGGAAGNETISGSSDADQIRAGAGNDTLVGGAGNDTYFYSAGDGNDILDEQTSGTDVD 3474
Query: 326 ------------------------IVYDANEHKQDFLSD-------VERLRFADQCIDSV 354
++ + L + VE + FAD
Sbjct: 3475 VLRLHDLLKSEVRFERSTSAPNDVMIRVLATGEAITLKNQFNLAGGVESIVFADGETLGG 3534
Query: 355 NVKQRS-------ILEYTASYEDLIQVIGQDVFESMKHFY 387
+ TA + L + D + +
Sbjct: 3535 AAGSLDAALTDLVAIYGTAGNDSLPGTVDSDTYVYLGGND 3574
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 44/313 (14%), Positives = 91/313 (29%), Gaps = 21/313 (6%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY---- 328
G++ NDV+ G + + G+D +G DT+ Y I +ENA
Sbjct: 3155 GTASNDVIDGFNIADTIRGGKGDDTLNGQGSNDTYLYARGDGNDTITDYENAGDDDRLVF 3214
Query: 329 --DANEHKQDFLSDVER----LRFADQCIDSVNVKQRSIL--EYTASYEDLIQVIGQDVF 380
+ ++ A D+ ++ +++L Y + ++ G
Sbjct: 3215 NNINASDVTLVRTGIDLKLVVAESAAGVGDAGSIVLKNMLDDYYARGVDKVVFADGTIWT 3274
Query: 381 ESM------KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKE 433
+ G + ++ G DD N G +D R + E
Sbjct: 3275 RATIRTKLLAQAATDGKNTIDGFNVADTIHGGKGDDSLNGQGNNDTYVYTRGDGNDVITE 3334
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
N L + ++ + + D+ + + G + Y G
Sbjct: 3335 YENAGGSDRLVFADANAADVTLVRNGNDVTVLVAESAVGAGNAGSITLKASLQDYYGRGV 3394
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
D VF + I H G + + + + + + + AG D
Sbjct: 3395 DAI-VFADGTTWSRADMIAHIAYVG-GAAGNETISGSSDADQIRAGAGNDTLVGGAGNDT 3452
Query: 554 FSNFGYEEGRSIT 566
+ + +
Sbjct: 3453 YFYSAGDGNDILD 3465
Score = 38.6 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 1/130 (0%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+ + L A + + GS N+++ G ++ G
Sbjct: 490 FSLSDDPLILTLGDTVDGYDRYHAGLFAATDGDDQITGSDENNIIAGGDGDDTLTGHLGG 549
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D+ G +G DTF + + +N VY L+D D+V
Sbjct: 550 DLLVGGNGSDTFI-DSVTVTDHQTGRQNENDVYIGGNENVGLLTDFLEWLVGVTETDTVR 608
Query: 356 VKQRSILEYT 365
++ E
Sbjct: 609 YSVDNLTEDN 618
>gi|213967248|ref|ZP_03395397.1| glycosyl transferase [Pseudomonas syringae pv. tomato T1]
gi|213928090|gb|EEB61636.1| glycosyl transferase [Pseudomonas syringae pv. tomato T1]
Length = 468
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 77/230 (33%), Gaps = 48/230 (20%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-------------PDAFKALE 444
F + YL D+ + A+HY+ G EGR F
Sbjct: 7 DFSASGYLNLNPDVASA----GIHPAQHYLQFGHAEGRRYKSTSVDKNNLLASGIFDPDF 62
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSD 502
Y+ + D++ + +D DHF GC EGR+ + F S Y+ Y R +
Sbjct: 63 YLQQYPDVLESGSDPA-------DHFLAGGCAEGRWASLFFRSDWYMDRYPVSR----TH 111
Query: 503 RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
HY+ G K G P+ F+ Y+ + HF G E
Sbjct: 112 PKNCLFHYLEIGSKLGYEPNPFFEPAYYLNKYRS--------ELKGLEPLSHFIKHGVEG 163
Query: 562 -GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
S F+ Y + S +HY+ GM+ G AL +
Sbjct: 164 LNPSPRFDSKSY------IRETGCSG--NPLKHYLEKGMRAGVALQRAEP 205
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 25/101 (24%)
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--------------SIT 566
P+ F A Y+ + D+ +A H+ FG+ EGR S
Sbjct: 5 PEDFSASGYLNLNPDVASA-------GIHPAQHYLQFGHAEGRRYKSTSVDKNNLLASGI 57
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
F+PD YL Y D+ S A H++ G EGR +
Sbjct: 58 FDPDFYLQQYPDVL----ESGSDPADHFLAGGCAEGRWASL 94
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 67/219 (30%), Gaps = 53/219 (24%)
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--------------DITFDSYLYLGSY 408
+ + I +H+ +FG +EGR FD YL Y
Sbjct: 13 YLNLNPDVASAGI-----HPAQHYLQFGHAEGRRYKSTSVDKNNLLASGIFDPDFYLQQY 67
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
D+ A H++ G EGR F++ Y+ + + +
Sbjct: 68 PDVL----ESGSDPADHFLAGGCAEGRWASLFFRSDWYMDRYP-------VSRTHPKNCL 116
Query: 468 DHFSNFGCEEGRFVT--FDSYLYLGSY-DDLRNVFGSDRGAAARHYITHGVKEGRNPDA- 523
H+ G + G F+ YL Y +L+ + H+I HG EG NP
Sbjct: 117 FHYLEIGSKLGYEPNPFFEPAYYLNKYRSELKGL------EPLSHFIKHG-VEGLNPSPR 169
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
F + YI H+ G G
Sbjct: 170 FDSKSYIR-----------ETGCSGNPLKHYLEKGMRAG 197
>gi|90411764|ref|ZP_01219773.1| type I secretion target repeat protein [Photobacterium profundum
3TCK]
gi|90327326|gb|EAS43690.1| type I secretion target repeat protein [Photobacterium profundum
3TCK]
Length = 1573
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 72/484 (14%), Positives = 129/484 (26%), Gaps = 15/484 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + S + D D G G T++ + + G
Sbjct: 835 FAGDGDDTINAGLGDDHIDAGSGDDLLKGGDGDDALFGGAGADTLIGGDGYDFLAGGDGN 894
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ +D + S + D + S +D +Q
Sbjct: 895 DTITDDGQDTVLGEGGDDTLTAAATGSHQIFGGTGDDTLIGSDQNDTLYGGADQDTIQGG 954
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTES 249
G G + T+Y G++ +DL L GG N +
Sbjct: 955 AGDDSLYAG----EGNDTITAGDGNDTVYGEAGNNTIDLGEGDNILYGGSGNDTAIAGSG 1010
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G E N ++ I+++ G +G+D + G +++ GNDV G G D +
Sbjct: 1011 ADHLSGAEGNDNLSGGAGIDTIEGGAGSDTLSGGLGDDILLGGDGNDVLLGGDGEDKL-F 1069
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
N + ++ + + D + L A LE +
Sbjct: 1070 AGDGDDQLFGGTGNDELHANSGNNTLEGGDDDDTLYGAAGDDILRGDAGDDRLEGFDGND 1129
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G D + EG DI D N +
Sbjct: 1130 TLEGGDGDDTLTAGSGNDTLSGGEGDDILSADSGNNILDGDAGNDTLTTGAGNDSLSGGL 1189
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD-SYLY 488
G L+ ++ L + G D S + D LY
Sbjct: 1190 GNDTLSASSGDNTLDGGEGNDKLTSGSGSDLLSGGQGADTLSAGSGNDTLSGGADNDKLY 1249
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
GS +D+ + + Y + + L + ++ L +
Sbjct: 1250 GGSGNDVL----TGDDGDDKLYGQNNDDQLDGGSGNDILSGGSGNDTLKGDIGNDTLKGD 1305
Query: 549 AGKD 552
+G D
Sbjct: 1306 SGTD 1309
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/361 (15%), Positives = 106/361 (29%), Gaps = 13/361 (3%)
Query: 200 GSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS 252
G+ + +Y S T++ GDD L D + GG N I L + +
Sbjct: 243 GNGDDTLYGGSDNDTLLGSDGNDTLFGEDGDDTLLGELGDDIIDGGAGNDILLGDDGNDT 302
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N ++ +++ G GND + G++ +++ +G+D G G D
Sbjct: 303 LIGGTGNDSLFGGLGTDTLSGGEGNDEIHGDTGDDIITGGAGDDFVLGGDGAD--VIEGG 360
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + + + + Q F + + L A + L
Sbjct: 361 AGNDLLLGGDGSDNLSGDEGNDQLFGEVGDDIITGGAGDDMVYGGLGNDQLVGGADNDQL 420
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G DV + + +EG DI Y + Y G
Sbjct: 421 FGGEGNDVLDGGEGSDILHANEGHDIINAGAGDDFIYAGTGDDIIDGGTGNDTIYGETGN 480
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
Y + D IN + + D+ N G + + + + +
Sbjct: 481 -NTVTAGDGDDTVYTDTGNDTINTGSGHDTIFAGAGDNIINTGIDNDTIYSAEGNDTIDA 539
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
D V+ D G E ++ ++++ G
Sbjct: 540 GDGDDVVYAGDGNNTIT--SGLGDDEVFTGSGNDSIHSGTGNDEVFAGAGTDTIYAGEGA 597
Query: 552 D 552
D
Sbjct: 598 D 598
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/421 (11%), Positives = 105/421 (24%), Gaps = 17/421 (4%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ D G G T+ + G
Sbjct: 997 YGGSGNDTAIAGSGADHLSGAEGNDNLSGGAGIDTIEGGAGSDTLSGGLGDDILLGGDGN 1056
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G ++ D D + + + ++ ++ + ++
Sbjct: 1057 DVLLGGDGEDKLFAGDGDDQLFGGTGNDELHANSGNNTLEGGDDDDTLYGAAGDDILRGD 1116
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTES 249
G + + + T+ G+D L D L N I
Sbjct: 1117 AGDDRL----EGFDGNDTLEGGDGDDTLTAGSGNDTLSGGEGDDILSADSGNNILDGDAG 1172
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-- 307
++ N +++ +++ SSG++ + G N+ SG+D+ G G DT
Sbjct: 1173 NDTLTTGAGNDSLSGGLGNDTLSASSGDNTLDGGEGNDKLTSGSGSDLLSGGQGADTLSA 1232
Query: 308 -----FYYAPSYLYKIYRFENAIIVY-DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ K+Y ++ D + K ++ ++L
Sbjct: 1233 GSGNDTLSGGADNDKLYGGSGNDVLTGDDGDDKLYGQNNDDQLDGGSGNDILSGGSGNDT 1292
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L+ + L G D + + G D+ + D
Sbjct: 1293 LKGDIGNDTLKGDSGTDTLWAGEGNDTLKGGSGDDVLYGETGNDSLSGDTGADTLYGGSG 1352
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ G D L + ++L + G D ++
Sbjct: 1353 SDTLTGGSGADTLSGGDDNDTLAGGDNDDNLDGGIGNDTLYGDSGNDLLFGQSGDDVLDG 1412
Query: 482 T 482
Sbjct: 1413 G 1413
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 63/495 (12%), Positives = 117/495 (23%), Gaps = 34/495 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D T + D G G + + G+
Sbjct: 970 TAGDGNDTVYGEAGNNTIDLGEGDNILYGGSGNDTAIAGSGADHLSGAEGNDNLSGGAGI 1029
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + G D + + + + A G + +
Sbjct: 1030 DTIEGGAGSDTLSGGLGDDILLGGDGNDVLLGGDGEDKLFAGDGDDQLFGGTGNDELHAN 1089
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G G++ + + + GDD L+ G N + ++
Sbjct: 1090 SGNNTLEGGDD----DDTLYGAAGDDILRGDAGDDRLE----GFDGNDTLEGGDGDDTLT 1141
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N T++ + + SGN+++ G++ N+ +GND G G DT A S
Sbjct: 1142 AGSGNDTLSGGEGDDILSADSGNNILDGDAGNDTLTTGAGNDSLSGGLGNDTL--SASSG 1199
Query: 315 LYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ E + + + L L + + L
Sbjct: 1200 DNTLDGGEGNDKLTSGSGSDLLSGGQGADTLSAGSGNDTLSGGADNDKLYGGSGNDVLTG 1259
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D + + G DI D+ N + G
Sbjct: 1260 DDGDDKLYGQNNDDQLDGGSGNDILSGGSGNDTLKGDIGNDTLKGDSGTDTLWAGEGNDT 1319
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+ L ++ L G D + + D+ G +
Sbjct: 1320 LKGGSGDDVLYGETGNDSLSGDTGADTLYGGSGSDTLTGGSGADTLSGGDDNDTLAGGDN 1379
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
D G L + ++ L D AG D
Sbjct: 1380 DDNLDGGI---------------------GNDTLYGDSGNDLLFGQSGDDVLDGGAGID- 1417
Query: 554 FSNFGYEEGRSITFN 568
F ++ F+
Sbjct: 1418 -QLFAGSGNDTLIFD 1431
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 75/499 (15%), Positives = 131/499 (26%), Gaps = 27/499 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
I + T D DV G G TI S E+ G
Sbjct: 511 FAGAGDNIINTGIDNDTIYSAEGNDTIDAGDGDDVVYAGDGNNTITSGLGDDEVFTGSGN 570
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
S G V+ + + Y D + G A +
Sbjct: 571 DSIHSGTGNDEVFAGAGTDTIYAGEGADTVYAGAGDDTLYGEQGNNALYGEDGDDTITAG 630
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTES 249
+ G + + S +Y +D L D L G + E
Sbjct: 631 TNSSSLFGG----QGDDTLTGSIESDALYGGSDNDTLFAGQGDDLLEGNSGDDNLQGAEG 686
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G N ++ + +VG GND ++G N++ GND DG G+ +
Sbjct: 687 EDTLLGGSGNDSLDGGDGNDILVGGVGNDTLLGGEGNDLLAGGDGNDSLDGGLGVSQLYG 746
Query: 310 YAPSY-------LYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSI 361
A + + + + + S + + D +
Sbjct: 747 DAGNDTLVSADESDILGGGSGNDTITSNAGNDTIYAGSGDDIINAGDGDDTIYGEAGSNQ 806
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGS 417
+ + +++ I D ++ + +G D D ++ GS DDL
Sbjct: 807 ITAGSGADNIYGGINSDTIDAGDGNDQIFAGDGDDTINAGLGDDHIDAGSGDDLLKGGDG 866
Query: 418 D----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
D GA A I + + ++ D H
Sbjct: 867 DDALFGGAGADTLIGGDGYDFLAGGDGNDTITDDGQDTVLGEGGDDTLTAAATGSHQIFG 926
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
G + + D L D + G + Y G D + A +
Sbjct: 927 GTGDDTLIGSDQNDTLYGGADQDTIQGGAGDDSL--YAGEGNDTITAGDGNDTVYGEAGN 984
Query: 534 EDLINAFADAPDLVQAGKD 552
+ D +G D
Sbjct: 985 NTIDLGEGDNILYGGSGND 1003
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/350 (15%), Positives = 89/350 (25%), Gaps = 23/350 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D R D+ FD D G G T+ + + + G
Sbjct: 1096 EGGDDDDTLYGAAGDDILRGDAGDDRLEGFDGNDTLEGGDGDDTLTAGSGNDTLSGGEGD 1155
Query: 135 MH----------PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
G G ND + +S +++ T
Sbjct: 1156 DILSADSGNNILDGDAGNDTLTTGAGNDSLSGGLGNDTLSASSGDNTLDGGEGNDKLTSG 1215
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGV 239
+ + GA S G +Y G+D+L D L G
Sbjct: 1216 SGSDL-LSGGQGADTLSAG----SGNDTLSGGADNDKLYGGSGNDVLTGDDGDDKLYGQN 1270
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ + G N T+ +++ G SG D + N+ SG+DV
Sbjct: 1271 NDDQLDGGSGNDILSGGSGNDTLKGDIGNDTLKGDSGTDTLWAGEGNDTLKGGSGDDVLY 1330
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER-LRFADQCIDSVNVKQ 358
G +G D+ + +Y + + + D L D +
Sbjct: 1331 GETGNDSL--SGDTGADTLYGGSGSDTLTGGSGADTLSGGDDNDTLAGGDNDDNLDGGIG 1388
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
L + + L G DV + + G D
Sbjct: 1389 NDTLYGDSGNDLLFGQSGDDVLDGGAGIDQLFAGSGNDTLIFDKNDTNIN 1438
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/329 (14%), Positives = 94/329 (28%), Gaps = 19/329 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + T + ++ G T+ + + LG
Sbjct: 1132 EGGDGDDTLTAGSGNDTLSGGEGDDILSADSGNNILDGDAGNDTLTTGAGNDSLSGGLGN 1191
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ +G + G + + + S S + + A G +D +
Sbjct: 1192 DTLSASSGDNTLDGGEGNDKLTSGSGSDLLSGGQGADTLSAGSGNDTLSGGADNDKLYGG 1251
Query: 195 YGAPKGSLGNNIYKI-----EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
G + + K+ + Q + G+D L +
Sbjct: 1252 SGNDVLTGDDGDDKLYGQNNDDQLDGGSGNDILSGGSGNDTLKGDIGNDTLK----GDSG 1307
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ E N T+ + + + G +GND + G++ + + SG+D G SG DT
Sbjct: 1308 TDTLWAGEGNDTLKGGSGDDVLYGETGNDSLSGDTGADTLYGGSGSDTLTGGSGADTL-- 1365
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+N + N+ D + L +L+ A +
Sbjct: 1366 --------SGGDDNDTLAGGDNDDNLDGGIGNDTLYGDSGNDLLFGQSGDDVLDGGAGID 1417
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
L G D K+ +G D+
Sbjct: 1418 QLFAGSGNDTLIFDKNDTNINGGDGFDLL 1446
>gi|326316855|ref|YP_004234527.1| hemolysin-type calcium-binding domain-containing protein [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323373691|gb|ADX45960.1| hemolysin-type calcium binding domain protein [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 1423
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 72/606 (11%), Positives = 143/606 (23%), Gaps = 104/606 (17%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM--HPGS 139
+ + R + D + G G + + G H G
Sbjct: 719 VFAGGAGDDLMRGGAGNDQLQGGQGNDTLKGGEGDDQLRGDEGDDVLEGGAGNDYLHGGF 778
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
N + D D + + + S + + + K
Sbjct: 779 GNNTFIFGRGDGQDRIDHYHDTAVGKHNVLQFKAGVSKDGVTVRRSGNDLVLSIDGTTDK 838
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGG-----------------DDLL-----DLTLIG 237
++ Y+ E SP + +D G D L D + G
Sbjct: 839 VTISAFFYQDEPGNAFSPLQEVRFDDGTVWDVSELARKVLIGTAEGDTLQGFVGDDVIDG 898
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ ++ G N + +++ G G+D + G+ ++V +GND
Sbjct: 899 LAGDDQIYGQNGNDTLSGGAGNDQLYGGQGNDTLKGGEGDDQLRGDEGDDVLEGGAGNDY 958
Query: 298 FDGSSGLDTFFYYAPSYLYK-------------------------IYRFENAIIVYDANE 332
G G +TF + + + + + + +
Sbjct: 959 LHGGFGNNTFIFGRGDGQDRIDHYHDTAVGKRNVLQFKAGVPKDGVTVRRSGNDLVLSID 1018
Query: 333 HKQDFLS---------------DVERLRFADQCI------------------DSVNVKQR 359
D ++ ++ +RF D +
Sbjct: 1019 GTTDKVTISAFFYQDEPGNAFSPLQEVRFDDGTVWDVSELARKVLIGTAEGDTLQGFVGD 1078
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVF 415
+++ A + + G D + +G D D L DD+
Sbjct: 1079 DVIDGLAGDDQIYGQNGNDTLSGGAGNDQLYGGQGNDTLKGGEGDDQLRGDEGDDVLEGG 1138
Query: 416 GSDRGA-----AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ G + R + + V+ +
Sbjct: 1139 AGNDYLHGGFGNNTFIFGRGDGQDRIDHYHDTAVGKHNVLQFKAGVSKDGVTVRRSGNDL 1198
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY-----------ITHGVKEGR 519
VT ++ Y S +L N R + T G
Sbjct: 1199 VLSIDGTTDKVTVSAFFYEDSPANLFNPIQQVRFDDGTVWDVAELSNRALTGTPGDDTLY 1258
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDL 579
A L ++ L D AG+D G + F+ D
Sbjct: 1259 GTQAADTLLGGTGNDTLYGGAGDDTLEGGAGQD--LLVGGSGNDTYLFSRGSQADRIVDE 1316
Query: 580 WNVFGS 585
+ G+
Sbjct: 1317 DSTSGN 1322
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/417 (11%), Positives = 101/417 (24%), Gaps = 89/417 (21%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G + I L E+ + G + + + + G GND + G ++ G+
Sbjct: 703 QGTSSDDIYLGDETANVFAGGAGDDLMRGGAGNDQLQGGQGNDTLKGGEGDDQLRGDEGD 762
Query: 296 DVFDGSSGLD---------TFFYYAPSYLYK-------------------------IYRF 321
DV +G +G D TF + + +
Sbjct: 763 DVLEGGAGNDYLHGGFGNNTFIFGRGDGQDRIDHYHDTAVGKHNVLQFKAGVSKDGVTVR 822
Query: 322 ENAIIVYDANEHKQDFLS---------------DVERLRFADQCI--------------- 351
+ + + + D ++ ++ +RF D +
Sbjct: 823 RSGNDLVLSIDGTTDKVTISAFFYQDEPGNAFSPLQEVRFDDGTVWDVSELARKVLIGTA 882
Query: 352 ---DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLY 404
+++ A + + G D + +G D D L
Sbjct: 883 EGDTLQGFVGDDVIDGLAGDDQIYGQNGNDTLSGGAGNDQLYGGQGNDTLKGGEGDDQLR 942
Query: 405 LGSYDDLRNVFGSDRGA-----AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
DD+ + G + R +
Sbjct: 943 GDEGDDVLEGGAGNDYLHGGFGNNTFIFGRGDGQDRIDHYHDTAVGKRNVLQFKAGVPKD 1002
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH------ 513
V+ + VT ++ Y + + R +
Sbjct: 1003 GVTVRRSGNDLVLSIDGTTDKVTISAFFYQDEPGNAFSPLQEVRFDDGTVWDVSELARKV 1062
Query: 514 --GVKEGRNPDAF---KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
G EG F ++ +A + + + AG D +G + ++
Sbjct: 1063 LIGTAEGDTLQGFVGDDVIDGLAGDDQIYGQNGNDTLSGGAGND--QLYGGQGNDTL 1117
Score = 80.6 bits (197), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/392 (10%), Positives = 89/392 (22%), Gaps = 72/392 (18%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG- 133
+ S + D R G + + G
Sbjct: 906 YGQNGNDTLSGGAGNDQLYGGQGNDTLKGGEGDDQLRGDEGDDVLEGGAGNDYLHGGFGN 965
Query: 134 -------------LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
+ H G +T S S+ +
Sbjct: 966 NTFIFGRGDGQDRIDHYHDTAVGKRNVLQFKAGVPKDGVTVRRSGNDLVLSIDGTTDKVT 1025
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK-----DSPFIQTIYDSGGDDLLDLTL 235
+ + + + + T+ GDD++D
Sbjct: 1026 ISAFFYQDEPGNAFSPLQEVRFDDGTVWDVSELARKVLIGTAEGDTLQGFVGDDVID--- 1082
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G + ++ G N + +++ G G+D + G+ ++V +GN
Sbjct: 1083 -GLAGDDQIYGQNGNDTLSGGAGNDQLYGGQGNDTLKGGEGDDQLRGDEGDDVLEGGAGN 1141
Query: 296 DVFDGSSGLDTFFYYAPSYLYK-------------------------IYRFENAIIVYDA 330
D G G +TF + + + + + +
Sbjct: 1142 DYLHGGFGNNTFIFGRGDGQDRIDHYHDTAVGKHNVLQFKAGVSKDGVTVRRSGNDLVLS 1201
Query: 331 NEHKQD---------------FLSDVERLRFADQCI---------DSVNVKQRSILEYTA 366
+ D + ++++RF D + L T
Sbjct: 1202 IDGTTDKVTVSAFFYEDSPANLFNPIQQVRFDDGTVWDVAELSNRALTGTPGDDTLYGTQ 1261
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + L+ G D G+D+
Sbjct: 1262 AADTLLGGTGNDTLYGGAGDDTLEGGAGQDLL 1293
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 41/260 (15%), Positives = 78/260 (30%), Gaps = 13/260 (5%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+ D G G T+ ++ G GG
Sbjct: 1085 AGDDQIYGQNGNDTLSGGAGNDQLYGGQGNDTLKGGEGDDQLRGDEG---DDVLEGGAGN 1141
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN- 205
+ + N++F+ D D + G V A G GN+
Sbjct: 1142 DYLHGGFGNNTFIFGRGDGQDRIDHYHDTAVGK---HNVLQFKAGVSKDGVTVRRSGNDL 1198
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG--GVKNYIDLNTESWSSIGGYEKNMTIA 263
+ I+ Y+ +L + D+ S ++ G + T+
Sbjct: 1199 VLSIDGTTDKVTVSAFFYEDSPANLFNPIQQVRFDDGTVWDVAELSNRALTGTPGDDTLY 1258
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI----Y 319
++++G +GND + G + ++ +G D+ G SG DT+ + S +I
Sbjct: 1259 GTQAADTLLGGTGNDTLYGGAGDDTLEGGAGQDLLVGGSGNDTYLFSRGSQADRIVDEDS 1318
Query: 320 RFENAIIVYDANEHKQDFLS 339
N ++ D L
Sbjct: 1319 TSGNVDVLSVGPGVATDQLW 1338
>gi|83645367|ref|YP_433802.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
gi|83633410|gb|ABC29377.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
Length = 3483
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 59/403 (14%), Positives = 114/403 (28%), Gaps = 20/403 (4%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
I S G T + AD + G G + ++ LG ++
Sbjct: 2042 ILSGAGGADTLLGNDGADSLSGGAGADDLQGGAGNDVLAGDAGDDKLAGGLG-DDLYRFS 2100
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G + + D + ++ + + P D V + Y + +
Sbjct: 2101 RGDGKDVITDANGTDRIEFTDVASTAVRVRREGGNLVISV-PGSDDQVTITGQYLGEQLT 2159
Query: 202 LGNNIYKIEVQQKDSPFIQT------IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ + + T + S D++ G + N +D +
Sbjct: 2160 PAASSVESVTFSDGVTWDFTALMAQAVVGSADADVIQGFSNGEIINTLD----GNDKVRA 2215
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + + + + G G D++ G + +G D G G DT F + S
Sbjct: 2216 GEGDDEVDGGAGDDELYGEGGADLLKGGLGADRLDGGAGEDRLFGGDGNDTLFGGSGSDE 2275
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + D + L + E +D + S + +L + + L
Sbjct: 2276 LSGEVGADTLHGGDGQDQLSGGLGNDELFGDSDADVLSGG-EGNDMLHGGSGDDVLNGDA 2334
Query: 376 GQDVFESMKHFYEFGLSEGRDITF-DSYLYLGSYDDLRNVFGS-DRGAAARHYITHGVK- 432
G D E G+D + L+ G +DL G+ D G G
Sbjct: 2335 GDDKLYGDGGQDELYGGAGKDELYGSGQLFGGEGEDLLEGQGTLDGGDGNDELRGQGSDT 2394
Query: 433 ----EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
G + + + L + G D +
Sbjct: 2395 LLGGAGDDVLIANTNTWTDTTNTLAGGAGNDTLYGSFGDDTYL 2437
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/348 (14%), Positives = 95/348 (27%), Gaps = 24/348 (6%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D + N + G + N I ++ + G G+D + G +
Sbjct: 2536 GTDAGETLTGYRDLNDEIHAGGGDDKVWGRQGNDAIYGDAGVDYLDGDEGDDRLFGGEGD 2595
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK-QDFLSDVERLR 345
+ G+D +G G D+ ++Y + ++ D +D +
Sbjct: 2596 DNLVGRIGDDYLEGGLGDDSL--QGNEGADELYGQDGEDSLFGGAGDDLLDGGADKDYFE 2653
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQD------------VFESMKHFYEFGLSE 393
L A ++L G D +F F
Sbjct: 2654 AGAGNDKVFGGAGNDQLSGDAGDDELTGGEGDDKYVYGPGDGHDVIFNGDGGFDGVLFVG 2713
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
G + + ++ G + G + + + G + ++ + +
Sbjct: 2714 GLNESRLTFSRDGDDLLIAIDDGVNDSVRVKDHFKGGDFAIDWVQPDGSSMINTANINKL 2773
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFV-TFDSYLYL--GSYDDLRNVFGSD----RGAA 506
A D D G+ G E G + + + D FG D G
Sbjct: 2774 AAGGDPDDGGSNGEYDNVMEGTEAGEQIAGTNGKNLIRGLGGGDTIFAFGGDDRIEGGDG 2833
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
H +G + ++ L+ D AG DH+
Sbjct: 2834 GDH--LYGGNGSGVGSGNDVIIGGDGNDVLVGEDGDDLLFGGAGDDHY 2879
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 58/479 (12%), Positives = 114/479 (23%), Gaps = 97/479 (20%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
++ K + + + I G + N + + ++G +GND ++G ++
Sbjct: 1863 SMEATEKADVIYGDLNDNRIDGLQGNDLLNGDRGNDELLGGAGNDQLLGGHGDDTLNGGV 1922
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII--------------------------- 326
G+D G G DT+ + I +++ +
Sbjct: 1923 GDDTLTGGEGADTYLFSLGDGKDVINNNDSSGVDAVVFDASVASADVRVSRTSNNLQLDY 1982
Query: 327 -------VYDANEHKQDFLSDVERLRFADQCI------------------DSVNVKQRSI 361
V+D ++ ++ +RFAD + + I
Sbjct: 1983 GSGDQVLVHDFFRNEGTTGYAIDEVRFADGTVWDKETLLDMALIGGDGDETLIGYSTDDI 2042
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT----FDSYLYLGSYDDLRNVFGS 417
L + L+ G D + G D+ D L G DDL
Sbjct: 2043 LSGAGGADTLLGNDGADSLSGGAGADDLQGGAGNDVLAGDAGDDKLAGGLGDDLYRFSRG 2102
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV----------QVGK 467
D E + + +I+ +
Sbjct: 2103 DGKDVITDANGTDRIEFTDVASTAVRVRREGGNLVISVPGSDDQVTITGQYLGEQLTPAA 2162
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
+ +G F + + G + R + +
Sbjct: 2163 SSVESVTFSDGVTWDFTALMAQAVVGSADADVIQGFSNGEIINTLDGNDKVRAGEGDDEV 2222
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDR 587
+ A ++L G D + G E R +FG D
Sbjct: 2223 DGGAGDDELYGEGGADLLKGGLGADR-LDGGAGEDR------------------LFGGDG 2263
Query: 588 SAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ G + + LS +L+ D D
Sbjct: 2264 NDTLF------------GGSGSDELSGEVGADTLHGGDGQDQLSGGLGNDELFGDSDAD 2310
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 64/400 (16%), Positives = 108/400 (27%), Gaps = 75/400 (18%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D +D L G N ++ G +++ + + G G D + G+ +
Sbjct: 1329 GYDAVDDNLKGLSGNDSLYGQAGADTLSGDAGADSLSGGDGDDKLYGGEGLDTLSGDKGD 1388
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-------------YDANEH 333
+V ND G +G D + I + +V
Sbjct: 1389 DVLVGGKDNDRLYGGAGKDIYQIAKGDGHDTISEEYSETVVDRVVFGAGILAENTVLLRR 1448
Query: 334 KQDFLSDV-----------------------ERLRFADQCIDSVNV-------------- 356
D L + E + FAD + ++
Sbjct: 1449 GWDLLVSIDEGAQTVRINNYFNKDASTGYALEFIEFADGTLWDIDTVKSKVLIPTEGQDE 1508
Query: 357 -----KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGS 407
L A + + G DV ++ + EG D+ D L G+
Sbjct: 1509 IWGYDATDDNLTGLAGNDVIRGQKGNDVIDAGDGADKLYGDEGDDVLTGGKGDDSLDGGA 1568
Query: 408 YDDLRN---VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
D + G+D H + P K ++ D + F
Sbjct: 1569 GSDTFHFNLGDGADTIIDRNHSGSDINTLQFGPGISKDDFWVRRSGDSLVLFHKNMQDRV 1628
Query: 465 VGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
+F N G E + FD GS DL + +G
Sbjct: 1629 TVSRYFENDGLGEYALSHIRFDD----GSELDLDELKKRAIQPTDDSDTIYGF------S 1678
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKD-HFSNFGYEE 561
L + ++ L D L Q G+D + G +E
Sbjct: 1679 TNDVLNGLKGNDVLYGKDGDDIILGQEGEDRLYGENGQDE 1718
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 69/579 (11%), Positives = 127/579 (21%), Gaps = 107/579 (18%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
T D+ D D G G T+ +
Sbjct: 1341 SGNDSLYGQAGADTLSGDAGADSLSGGDGDDKLYGGEGLDTLSGDKGDDVLVGGKDNDRL 1400
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G D + + + V GA
Sbjct: 1401 YGGAGKDIYQIAKGDGHDTISEEYSETVVDRVVFGAGILAENTVLLRRGWDLLVSIDEGA 1460
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD----DLLD--LTLIGGVKNYIDLNTESWS 251
+ N ++ I + G D + + + ++ I +
Sbjct: 1461 QTVRINN---YFNKDASTGYALEFIEFADGTLWDIDTVKSKVLIPTEGQDEIWGYDATDD 1517
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N I + + G D + G+ ++V G+D DG +G DTF +
Sbjct: 1518 NLTGLAGNDVIRGQKGNDVIDAGDGADKLYGDEGDDVLTGGKGDDSLDGGAGSDTFHFNL 1577
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD------------------------------- 340
I ++ + + D
Sbjct: 1578 GDGADTIIDRNHSGSDINTLQFGPGISKDDFWVRRSGDSLVLFHKNMQDRVTVSRYFEND 1637
Query: 341 ------VERLRFADQ------------------CIDSVNVKQRSILEYTASYEDLIQVIG 376
+ +RF D +L + L G
Sbjct: 1638 GLGEYALSHIRFDDGSELDLDELKKRAIQPTDDSDTIYGFSTNDVLNGLKGNDVLYGKDG 1697
Query: 377 QDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDR---GAAARHYIT 428
D+ + G+D DS D L G+D G I
Sbjct: 1698 DDIILGQEGEDRLYGENGQDELQGGLGEDSLYGGADNDRLFGQEGNDTLYGGDGDDDLIG 1757
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG---------------------- 466
+ A Y + + + + +
Sbjct: 1758 GVGDDHLEGGAGDDNYYFTKGDGKDSIYDNNGKITIYVSEIELDDVIFRRNGRHLDVLFK 1817
Query: 467 ---------KDHFSNFGCEEGRFVTF----DSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
+D++ +FG GR + F +L S +D+ A Y
Sbjct: 1818 QTDTDKITIRDYYPDFGGIAGRSIGFFLPGSGLSHLFSAEDINAKSMEATEKADVIYGDL 1877
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L +++L+ + L G D
Sbjct: 1878 NDNRIDGLQGNDLLNGDRGNDELLGGAGNDQLLGGHGDD 1916
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 75/512 (14%), Positives = 133/512 (25%), Gaps = 53/512 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
G + D G G T+ + E+ +G
Sbjct: 2223 DGGAGDDELYGEGGADLLKGGLGADRLDGGAGEDRLFGGDGNDTLFGGSGSDELSGEVGA 2282
Query: 135 MHPGSYNGGYP-VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+G G+ ND V+S D + S D++
Sbjct: 2283 DTLHGGDGQDQLSGGLGNDELFGDSDADVLSGGEGNDMLHGGSG--------DDVL---- 2330
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G G++ + +Y G D L + DL +
Sbjct: 2331 -----NGDAGDD------KLYGDGGQDELYGGAGKDELYGSGQLFGGEGEDLLEGQGTLD 2379
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV-----FFESSGNDVFDGSSGLDTFF 308
GG + Q + ++++G +G+DV+I N+ +GND GS G DT+
Sbjct: 2380 GGDGNDELRGQGS--DTLLGGAGDDVLIANTNTWTDTTNTLAGGAGNDTLYGSFGDDTYL 2437
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + ++ E D L E + +D + A
Sbjct: 2438 FNLGDGRDTLIERREGE-AFNNVEPSSDILKFGEGVEASDLSFTRRSNDLIIEHSNGADG 2496
Query: 369 EDLIQV--------------IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ V + ++ G D Y D++
Sbjct: 2497 VTIKNWYLGSTDHFKVNQFQFADGVVLTDADVEARTVTLGTDAGETLTGYRDLNDEIHAG 2556
Query: 415 FGSDRGAAARH----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
G D+ + Y GV + L ++L+ D +G D
Sbjct: 2557 GGDDKVWGRQGNDAIYGDAGVDYLDGDEGDDRLFGGEGDDNLVGRIGDDYLEGGLGDDSL 2616
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
+ + G D G+D+ G + L
Sbjct: 2617 QGNEGADELYGQDGEDSLFGGAGDDLLDGGADKDYFEA---GAGNDKVFGGAGNDQLSGD 2673
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
A ++L D + G H F + G
Sbjct: 2674 AGDDELTGGEGDDKYVYGPGDGHDVIFNGDGG 2705
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 59/453 (13%), Positives = 117/453 (25%), Gaps = 51/453 (11%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ D + +D + + +G G + H
Sbjct: 1534 NDVIDAGDGADKLYGDEGDDVLTGGKGDDSLDGGAGSDTFHFNLGDGADTIIDRNHSGSD 1593
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L + D + + D Y + + D +
Sbjct: 1594 INTLQFGPGISKDDFWVRRSGDSLVLFHKNMQDRVTVSRYFENDGLGEYALSHIRFDDGS 1653
Query: 191 VQKI-----YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ + IY + G+D+L G + I L
Sbjct: 1654 ELDLDELKKRAIQPTDDSDTIYGFSTN-------DVLNGLKGNDVL----YGKDGDDIIL 1702
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE---------SSGND 296
E + G + +S+ G + ND + G N+ + G+D
Sbjct: 1703 GQEGEDRLYGENGQDELQGGLGEDSLYGGADNDRLFGQEGNDTLYGGDGDDDLIGGVGDD 1762
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+G +G D +++ IY I +Y + D +
Sbjct: 1763 HLEGGAGDDNYYFTKGDGKDSIYDNNGKITIYVSEIELDDVIFR---------------- 1806
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLR 412
+ L + D ++ +FG GR I F +L S +D+
Sbjct: 1807 ------RNGRHLDVLFKQTDTDKITIRDYYPDFGGIAGRSIGFFLPGSGLSHLFSAEDIN 1860
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
A Y L +++L+ + L G D +
Sbjct: 1861 AKSMEATEKADVIYGDLNDNRIDGLQGNDLLNGDRGNDELLGGAGNDQLLGGHGDDTLNG 1920
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
++ + YL S D ++V ++ +
Sbjct: 1921 GVGDDTLTGGEGADTYLFSLGDGKDVINNNDSS 1953
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 43/295 (14%), Positives = 80/295 (27%), Gaps = 33/295 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + GDD L D +L G + S+ G + +
Sbjct: 2585 GDDRLFGGEGDDNLVGRIGDDYLEGGLGDDSLQGNEGADELYGQDGEDSLFGGAGDDLLD 2644
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ +GND V G + N+ +G+D G G D + Y I+ +
Sbjct: 2645 GGADKDYFEAGAGNDKVFGGAGNDQLSGDAGDDELTGGEGDDKYVYGPGDGHDVIFNGDG 2704
Query: 324 A-----------IIVYDANEHKQDFLSDVER-----------LRFADQCIDSVNVKQRSI 361
+ D L ++ + D ID V S+
Sbjct: 2705 GFDGVLFVGGLNESRLTFSRDGDDLLIAIDDGVNDSVRVKDHFKGGDFAIDWVQPDGSSM 2764
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL-----YLGSYDDLRNVFG 416
+ + D + ++ +E + + LG D + G
Sbjct: 2765 INTANINKLAAGGDPDDGGSNGEYDNVMEGTEAGEQIAGTNGKNLIRGLGGGDTIFAFGG 2824
Query: 417 SDRGA-AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
DR +G + ++ L+ D G DH+
Sbjct: 2825 DDRIEGGDGGDHLYGGNGSGVGSGNDVIIGGDGNDVLVGEDGDDLLFGGAGDDHY 2879
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/244 (12%), Positives = 58/244 (23%), Gaps = 63/244 (25%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G E + I + + G+ G+DV+ G ++ G+D G G D
Sbjct: 1162 NNNYSGSEGHSYIIGSAGADRLNGNGGDDVLEGREGSDTLTGGKGSDRIVGGVGDDNLQG 1221
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQD--------------------------------- 336
Y+ + ++ ++N +D
Sbjct: 1222 GEGDDRYEFSAGDGRDVINNSNAAGEDRIYLDASIAQSDVRLTRNGRDLLVHIGEDGQVI 1281
Query: 337 -----------FLSDVERLRFADQCIDSVNV-------------------KQRSILEYTA 366
V+ + FAD + + L+ +
Sbjct: 1282 RVSSYFNEDGATGYAVDLIEFADGTVWDIATVKQKVQVPTDGADELWGYDAVDDNLKGLS 1341
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L G D +G D + D + R Y
Sbjct: 1342 GNDSLYGQAGADTLSGDAGADSLSGGDGDDKLYGGEGLDTLSGDKGDDVLVGGKDNDRLY 1401
Query: 427 ITHG 430
G
Sbjct: 1402 GGAG 1405
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 5/274 (1%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ V ++ F ET + I G ++ + G G+ +
Sbjct: 3124 ALVENIEF-ETGGQISAQQIFGVFGLSIPAASVYDQTVDGTQNGDSALTAGDGRDLVRGF 3182
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
N + G G VY + D + + + +
Sbjct: 3183 NGNDTLNGGKG-DDLLIGGRGDDVYVFNAGGGKDVIDNTGGGFDTLRFEGISFGQVSSGL 3241
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
D + + G+ +L N + F + GD + + + +
Sbjct: 3242 QRNGDHLTLNVSGGSDSVTLKNFFKGGDHAIDRIEFA-SGGQITGDQIFGVFGMSNPDSD 3300
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
N G +TIA + + GSS D++ G + ++ G+D G +
Sbjct: 3301 GSPNYSGLPDERG-FGTVTIA-EAGADVIFGSSDGDLIDGGAGDDHLTGGRGDDYLIGGA 3358
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
G DT+ + A I + A D
Sbjct: 3359 GNDTYHFAAGDGRDTINDYAGAGEDQLQFAAGVD 3392
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 7/124 (5%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
D G + +LTL G +S N T + + + G++GND +
Sbjct: 576 HFVDDMGKERYELTLDGLDGGLSPTREFYFS----GTGNDTYSGGEGDDYLFGNAGNDSL 631
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---AIIVYDANEHKQDF 337
G + G+D +G G DT+ + L K+D
Sbjct: 632 SGGEGIDYLEGGDGSDTLEGGEGFDTYVSDSSDTLKDSDGKGTVKLEDTTLVGGTRKEDD 691
Query: 338 LSDV 341
++
Sbjct: 692 PENI 695
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 51/389 (13%), Positives = 103/389 (26%), Gaps = 72/389 (18%)
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
+ D D G G T+ + +G VY D D+
Sbjct: 3025 DVINGSDADDTLIGGSGDDTLSGGAGDDLLLGGVG--------DDVYVYTGGQDVLRDAA 3076
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
+ + +S T +D+ V K+ G + +L + + ++ F
Sbjct: 3077 GVDTLRFGGGITFGQVSSG---LTKAGNDL--VLKVSGGGQVTLTDFFLGGDALVENIEF 3131
Query: 219 -------IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
Q I+ G L + +D S++ + + +++
Sbjct: 3132 ETGGQISAQQIFGVFG---LSIPAASVYDQTVDGTQNGDSALTAGDGRDLVRGFNGNDTL 3188
Query: 272 VGSSGNDVVIGNSANNV--FFESSGNDVFD-GSSGLDTFFYYA-PSYLYKIYRFENAIIV 327
G G+D++IG ++V F G DV D G DT + N +
Sbjct: 3189 NGGKGDDLLIGGRGDDVYVFNAGGGKDVIDNTGGGFDTLRFEGISFGQVSSGLQRNGDHL 3248
Query: 328 YDANEHKQDFLS----------DVERLRFADQCIDSVNVKQ------------------- 358
D ++ ++R+ FA + +
Sbjct: 3249 TLNVSGGSDSVTLKNFFKGGDHAIDRIEFASGGQITGDQIFGVFGMSNPDSDGSPNYSGL 3308
Query: 359 ---------------RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-FDSY 402
++ ++ + + G D + G D F +
Sbjct: 3309 PDERGFGTVTIAEAGADVIFGSSDGDLIDGGAGDDHLTGGRGDDYLIGGAGNDTYHFAAG 3368
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+ +D AA +
Sbjct: 3369 DGRDTINDYAGAGEDQLQFAAGVDEQNLW 3397
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 24/98 (24%), Gaps = 5/98 (5%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E + L A + L G D E EG D
Sbjct: 602 EFYFSGTGNDTYSGGEGDDYLFGNAGNDSLSGGEGIDYLEGGDGSDTLEGGEGFDTYVSD 661
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
D L++ G + G ++ +P+
Sbjct: 662 SS-----DTLKDSDGKGTVKLEDTTLVGGTRKEDDPEN 694
>gi|67926068|ref|ZP_00519320.1| Peptidase M10A and M12B, matrixin and adamalysin [Crocosphaera
watsonii WH 8501]
gi|67852088|gb|EAM47595.1| Peptidase M10A and M12B, matrixin and adamalysin [Crocosphaera
watsonii WH 8501]
Length = 284
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 71/211 (33%), Gaps = 30/211 (14%)
Query: 26 YFIRYKPDVLTTHRLSF--DITELNPNAQEVARWALGEWSKVVDLTFEETSIH-----SD 78
+ ++ D + E++ + R + V+D+ F E
Sbjct: 82 TYSFFEDDDFANSYYGSESGVQEVSEGIKSNFRKIVAWLENVIDIDFVEVDETDPSTFGQ 141
Query: 79 IKFISSNN---GYVCTPRY---DSRYFMEINFDK-ADVWRYGIGKGTILSHNALHEIGHA 131
I+ +SNN Y P + + +D+ D + G +HE+GHA
Sbjct: 142 IRVQNSNNPGYAYAYYPGFTSRSGDIHFKTGYDRLGDTNGFQHDAGKHGYMTIVHELGHA 201
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
LGL H S P D+ SVM+Y + T M D+ A+
Sbjct: 202 LGLAHTFSGTVLDP--------GLDNTDNSVMTYN--------FTGHSAGTFMALDVAAL 245
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI 222
Q +YGA + GN Y ++
Sbjct: 246 QSLYGAKTHNNGNTTYTFGNYIDQVSVCDSM 276
>gi|166367829|ref|YP_001660102.1| hypothetical protein MAE_50880 [Microcystis aeruginosa NIES-843]
gi|166090202|dbj|BAG04910.1| hypothetical protein MAE_50880 [Microcystis aeruginosa NIES-843]
Length = 1225
Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 61/465 (13%), Positives = 116/465 (24%), Gaps = 50/465 (10%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + + + + + V G G +
Sbjct: 734 TDGKEAGSVSSVFTLTRTGDLSSALTVNYTLAGTATPGVDYTNPGAGKATFAAGSSKATI 793
Query: 131 AL----GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
L L+ S + + + ++ D G ++
Sbjct: 794 TLPTIDDLLSDPSETIITKITAPTGYTISGPDNATATILDNDGNAANDNLVGTSFADALA 853
Query: 187 DIVAVQKIYGAP-----KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+ + G G N+ Y + + + D+ G D L+
Sbjct: 854 GVGGNDTLSGLGGNDTLDGGASNDTYLFDTDLVLNS--DRLIDASGIDTLNFAATTTKTI 911
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
++L + ++ +T+A T E+V+G S ND ++GN+ N +GND G
Sbjct: 912 NLNLGSTVAQTVTAGNLTLTLASATAFENVIGGSLNDNIVGNTLANSLNGGAGNDTLSGL 971
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL----------------------- 338
G DT A + Y + D L
Sbjct: 972 GGNDTLDGGAGNDTYLFDTDLVLGSDRLIDASGIDTLNFAATTTKTINLNLGSTVAQTVT 1031
Query: 339 -----------SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ E + + V + L A + L G D
Sbjct: 1032 AGNLTLTLASATAFENVIGGSLNDNIVGNTLANSLNGGAGNDTLNGGAGNDNLNGGAGND 1091
Query: 388 EFGLSEGRDIT-----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G+D D+ Y + L F +G + + + A
Sbjct: 1092 NLTGGLGKDTLTGSTGLDTLTYNALGESLLTGFDVIQGYSGTGASLDSINAPGSIAAINL 1151
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ L A A + + G+ TF +
Sbjct: 1152 TASKGTATALTEAAIQAVLTATKFAANTAAAFKVTGQSGTFIALN 1196
Score = 72.1 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 59/520 (11%), Positives = 110/520 (21%), Gaps = 60/520 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D F ++ P + + G + A+ +
Sbjct: 640 DGVDTTFFGFDSDGNGKPNFFGTSAAAPSAAGVAALMRQKVPGVTNTQIYNALKSTAVDM 699
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP-MVSDIV-AVQ 192
PG + +S +S D S T D+ A+
Sbjct: 700 NTPGYDFLTGNGLIRADAAIAYILPSSTISIAKTTDGKEAGSVSSVFTLTRTGDLSSALT 759
Query: 193 KIY--------GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
Y G + G + D D + +
Sbjct: 760 VNYTLAGTATPGVDYTNPGAGKATFAAGSSKATITLPTIDDLLSDPSETIITKITAPTGY 819
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ ++ N + +++VG+S D + G N+ GND DG +
Sbjct: 820 TISGPDNATATILDND---GNAANDNLVGTSFADALAGVGGNDTLSGLGGNDTLDGGASN 876
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI------------- 351
DT+ + L + + I ++ Q +
Sbjct: 877 DTYLFDTDLVLNSDRLIDASGIDTLNFAATTTKTINLNLGSTVAQTVTAGNLTLTLASAT 936
Query: 352 ---DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ + + L G D + G D +
Sbjct: 937 AFENVIGGSLNDNIVGNTLANSLNGGAGNDTLSGLGGNDTLDGGAGNDTYLFDTDLVLGS 996
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
D L + G D A T + + + L +A A + D
Sbjct: 997 DRLIDASGIDTLNFAAT-TTKTINLNLGSTVAQTVTAGNLTLTLASATAFENVIGGSLND 1055
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
+ G L
Sbjct: 1056 NIVGNTLANSLNGG------------------------------AGNDTLNGGAGNDNLN 1085
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
A +++L G D + E F+
Sbjct: 1086 GGAGNDNLTGGLGKDTLTGSTGLDTLTYNALGESLLTGFD 1125
>gi|320104771|ref|YP_004180362.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC
43644]
gi|319752053|gb|ADV63813.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC
43644]
Length = 1881
Score = 89.5 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 70/483 (14%), Positives = 118/483 (24%), Gaps = 17/483 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + G D AD R G G T+ I LG
Sbjct: 435 GGDGNDLIFGFGGDDLVDGGRGNDSIEGGDGADFLRGGEGDDTVFGGAGNDTIFGGLGND 494
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + VD + + + DS+ + Y
Sbjct: 495 SLEGGAGNDVLDAVDEFSDGTPDEMNTLIGGDGNDSLFGSLGDDLMEGGAG--EDFLDAY 552
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID-----LNTESW 250
+G + +I GDD +D + ++ L E
Sbjct: 553 EGDDTLIGG---EGNDTLLGGAGNDSIEGGSGDDSIDGGSGDDQIDDLEGNNTLLGGEGN 609
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+I G N I + + + G +GN+ + G N++ F GND DG +G DT
Sbjct: 610 DTIFGGLGNDLIDGGSGDDFLDGVAGNNTIFGGDGNDLIFGGVGNDSIDGGAGDDTI--D 667
Query: 311 APSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ I + + Q D L L + +++ + +
Sbjct: 668 GGAGDDSIEGGSGDDSIDGGSGDDQIDDLEGNNTLLGGEGNDTIFGGLGNDLIDGGSGDD 727
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L V G + G D D G I
Sbjct: 728 FLDGVAGNNTIFGGDGNDLIFGGVGNDSI--DGGAGDDTIDGGAGDDVLFGGPGNDSILG 785
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G + + + +V F + G + + D +
Sbjct: 786 GEGDDLIHTSSPDDPGSPEEVNTARGGEGNDTIVGSVGRDFLDGGLGQDSLIGGDGDDTI 845
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
+ D V G G R + + + L +
Sbjct: 846 FAGDGDDLVDGGRGNDLLE--GGLGNDFLRGGEGDDTVLGNFGDDTLFGGLGNDSIEGGP 903
Query: 550 GKD 552
G D
Sbjct: 904 GND 906
Score = 86.4 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 65/496 (13%), Positives = 125/496 (25%), Gaps = 33/496 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG- 133
S + D G G TIL + G
Sbjct: 283 TGGRGNDTILGGSGGNFIDGGSGDDSLVGGAGNDTILGGAGNDTILGGAGNDSLFGGDGE 342
Query: 134 -LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
L+ G + ++ D+ ++ A +D++
Sbjct: 343 DLIEGGDGHDNIEGGAGNDTVFGDAGDDTIFGDAGDDLIYGGAGTDSIEGGSGNDVL--- 399
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G G T++ S G + +L+GG N +
Sbjct: 400 -----DAGQPGTVRENTNDTLIGGDGNDTLFGSDGAN----SLLGGDGNDLIFGFGGDDL 450
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT------ 306
+ G N +I + + G G+D V G + N+ F GND +G +G D
Sbjct: 451 VDGGRGNDSIEGGDGADFLRGGEGDDTVFGGAGNDTIFGGLGNDSLEGGAGNDVLDAVDE 510
Query: 307 FFYYAPSYLYKIYRFENAIIVY----------DANEHKQDFLSDVERLRFADQCIDSVNV 356
F P + + + ++ A E D + L + +
Sbjct: 511 FSDGTPDEMNTLIGGDGNDSLFGSLGDDLMEGGAGEDFLDAYEGDDTLIGGEGNDTLLGG 570
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+E + + + G D + ++ EG D F + F
Sbjct: 571 AGNDSIEGGSGDDSIDGGSGDDQIDDLEGNNTLLGGEGNDTIFGGLGNDLIDGGSGDDFL 630
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ G +++ A + + D G D + G
Sbjct: 631 DGVAGNNTIFGGDGNDLIFGGVGNDSIDGGAGDDTIDGGAGDDSIEGGSG-DDSIDGGSG 689
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ + + L + +FG G + ++ +
Sbjct: 690 DDQIDDLEGNNTLLGGEGNDTIFGGLGNDLID--GGSGDDFLDGVAGNNTIFGGDGNDLI 747
Query: 537 INAFADAPDLVQAGKD 552
+ AG D
Sbjct: 748 FGGVGNDSIDGGAGDD 763
Score = 79.1 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 65/483 (13%), Positives = 123/483 (25%), Gaps = 44/483 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D T + D +D G G + +A I G
Sbjct: 185 EGGDGHDYIEGGTGNDTILGGAGNDTIYGGDDSDTILGGSGDDFLDGGDANDSIDGDAGD 244
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G + G + +
Sbjct: 245 DTIVAIAGNNTIEGGLGNDVVLGGDDDDFITDIDGGVFTGGRG----------------- 287
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
LG ++ G+D + +GG N L S+
Sbjct: 288 ---NDTILGG---SGGNFIDGGSGDDSLVGGAGNDTI----LGGAGNDTILGGAGNDSLF 337
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + I +++ G +GND V G++ ++ F +G+D+ G +G D+
Sbjct: 338 GGDGEDLIEGGDGHDNIEGGAGNDTVFGDAGDDTIFGDAGDDLIYGGAGTDSI---EGGS 394
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ V + + L +D + ++ + +
Sbjct: 395 GNDVLDAGQPGTVRENTNDTLIGGDGNDTLFGSDGANSLLGGDGNDLIFGFGGDDLVDGG 454
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
G D E EG D F D+ D L G+D A +
Sbjct: 455 RGNDSIEGGDGADFLRGGEGDDTVFGGAGNDTIFGGLGNDSLEGGAGNDVLDAVDEFS-- 512
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
PD L ++ L + D G+D + ++ + L
Sbjct: 513 ----DGTPDEMNTLIGGDGNDSLFGSLGDDLMEGGAGEDFLDAYEGDDTLIGGEGNDTLL 568
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
G + GS + G + + + L ++ + + +
Sbjct: 569 GGAGNDSIEGGSGDDSID---GGSGDDQIDDLEGNNTLLGGEGNDTIFGGLGNDLIDGGS 625
Query: 550 GKD 552
G D
Sbjct: 626 GDD 628
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/362 (12%), Positives = 89/362 (24%), Gaps = 24/362 (6%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ I GDD++ +GG + L SI G + + I T ++
Sbjct: 146 DTILGGLAAERILGGSGDDVI----LGGDGDDTILGGSGDDSIEGGDGHDYIEGGTGNDT 201
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP-------SYLYKIYRFEN 323
++G +GND + G ++ SG+D DG D+ A + I
Sbjct: 202 ILGGAGNDTIYGGDDSDTILGGSGDDFLDGGDANDSIDGDAGDDTIVAIAGNNTIEGGLG 261
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+V ++ D + + ++ + + L+ G D
Sbjct: 262 NDVVLGGDDDDFITDIDGGVFTGGRGNDTILGGSGGNFIDGGSGDDSLVGGAGNDTILGG 321
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D F + + G +
Sbjct: 322 AGNDTILGGAGNDSLFGGDGEDLIEGGDGHDNIEGGAGNDTVFGDAGDDTIFGDAGDDLI 381
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
A + + + N D+ + L G+D
Sbjct: 382 YGGAGTDSIEGGSGNDVLDAGQPGTVRENTNDTLIGGDGNDTLFGSDGANSLLGGDGNDL 441
Query: 504 GAAA-------------RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
G R + + A ++ + + AG
Sbjct: 442 IFGFGGDDLVDGGRGNDSIEGGDGADFLRGGEGDDTVFGGAGNDTIFGGLGNDSLEGGAG 501
Query: 551 KD 552
D
Sbjct: 502 ND 503
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 66/453 (14%), Positives = 117/453 (25%), Gaps = 26/453 (5%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
++ D + + D G TI+ N I
Sbjct: 1353 TTSAGDPDQSDTLIGSDGNDLLAGSDGPDLLDGGAGDDALFGNGGNDTIVGGNGNDSISG 1412
Query: 131 ALG-----LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
G + P + D ND+ + + + D G ++
Sbjct: 1413 GAGDDLIYTVAPDDPGIPGEINAARGDAGNDTLIGGASDELLDGGAGDDTIDGGAGDDVL 1472
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEV-------QQKDSPFIQTIYDSGGDDLLDL----- 233
I G L + + + TI S G D LD
Sbjct: 1473 FGGPGNDSILGGEGDDLIHTSSPDDPGSPEEVNTARGGEGNDTIVGSVGRDFLDGGLGQD 1532
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+LIGG + + + G N + + + G G+D V+GN ++ F
Sbjct: 1533 SLIGGDGDDTIFAGDGDDLVDGGRGNDLLEGGLGNDFLRGGEGDDTVLGNFGDDTLFGGL 1592
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
GND +G G D E+ I + + + +
Sbjct: 1593 GNDSIEGGPGNDLIRAVDEFSDGPALANESNTIFGGDGDDTIIGSNGPDLIDGGLGQDSL 1652
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYD 409
+ + + + G D E + EG D + +Y G +
Sbjct: 1653 IGGDGDDTIFAGDGDDLVDGGRGNDSIEGGEGADFLRGGEGDDTVLGGAGNDTIYGGLGN 1712
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
D + A + G PD L ++ L + G+D
Sbjct: 1713 DSLEGGAGNDVLDAVDEFSDG-----TPDEMNTLIGGEGNDSLFGSQGGDLMEGGAGEDF 1767
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ ++ + LG D G
Sbjct: 1768 LDAYEGDDTLIGGDGNDTLLGGNGDDALDGGPG 1800
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 63/399 (15%), Positives = 105/399 (26%), Gaps = 30/399 (7%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
T+ + + I D D G G + +
Sbjct: 1504 VNTARGGEGNDTIVGSVGRDFLDGGLGQDSLIGGDGDDTIFAGDGDDLVDGGRGNDLLEG 1563
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
LG G V G D L + P + ++ A + P +++
Sbjct: 1564 GLGNDFLRGGEGDDTVLGNFGDDTLFGGLGNDSIEGGPGNDLIRAVDEFSDGPALAN--- 1620
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDL 245
TI S G DL+D +LIGG +
Sbjct: 1621 ------------------ESNTIFGGDGDDTIIGSNGPDLIDGGLGQDSLIGGDGDDTIF 1662
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G N +I + + G G+D V+G + N+ + GND +G +G D
Sbjct: 1663 AGDGDDLVDGGRGNDSIEGGEGADFLRGGEGDDTVLGGAGNDTIYGGLGNDSLEGGAGND 1722
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
A E ++ + + + L
Sbjct: 1723 --VLDAVDEFSDGTPDEMNTLIGGEGNDSLFGSQGGDLMEGGAGEDFLDAYEGDDTLIGG 1780
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ L+ G D + E + G DI F Y D L G+D
Sbjct: 1781 DGNDTLLGGNGDDALDGGPGLDEVNGNAGDDIVFG--GYDDLPDTLVGGPGNDLFFLVAG 1838
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
+ ++ NP +A N L
Sbjct: 1839 FEDQDLRPDFNPITDQAQVIPFVPPTPENPRPTPLPLEP 1877
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 79/272 (29%), Gaps = 25/272 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY---IDLNTESWSSIGGYEKNMTIAQH 265
T++ GGDDL+ G + + + + ++ G + TI
Sbjct: 1247 GNDTLWGGLGSDTLFGRGGDDLIFGFQPGDLGDDSPNLIHGDDGNDTLVGSDGRDTIRGG 1306
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+++ G G+D + GN+ +++ +GND+ +G G D +
Sbjct: 1307 AGNDTIEGLGGDDSLEGNAGDDLIEGGAGNDLIEGGDGDDRLY--------------GHT 1352
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ + D L +D +L+ A + L G D
Sbjct: 1353 TTSAGDPDQSDTLIG------SDGNDLLAGSDGPDLLDGGAGDDALFGNGGNDTIVGGNG 1406
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
G D+ + N D A I E + A
Sbjct: 1407 NDSISGGAGDDLIYTVAPDDPGIPGEINAARGD--AGNDTLIGGASDELLDGGAGDDTID 1464
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ +D++ ++ D + +
Sbjct: 1465 GGAGDDVLFGGPGNDSILGGEGDDLIHTSSPD 1496
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 73/495 (14%), Positives = 119/495 (24%), Gaps = 37/495 (7%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
T+ + + I D D G G + +
Sbjct: 806 VNTARGGEGNDTIVGSVGRDFLDGGLGQDSLIGGDGDDTIFAGDGDDLVDGGRGNDLLEG 865
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
LG G V G D L + P + ++ A + P +++
Sbjct: 866 GLGNDFLRGGEGDDTVLGNFGDDTLFGGLGNDSIEGGPGNDLIRAVDEFSDGPALAN--- 922
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDL 245
TI S G DL+D +LIGG +
Sbjct: 923 ------------------ESNTIFGGDGDDTIIGSNGPDLIDGGLGQDSLIGGDGDDTIF 964
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G N + + + G G+D V+GN ++ F GND +G G D
Sbjct: 965 AGDGDDLVDGGRGNDLLEGGLGNDFLRGGEGDDTVLGNFGDDTLFGGLGNDSIEGGPGND 1024
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
E+ I + + + + + L
Sbjct: 1025 LIRAVDEFSDGPALANESNTIFGGDGDDTIIGSNGPDLIDGGLGQDSLIGGDGDDTLIGG 1084
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEG----RDITFDSYLYLGSYDDLR----NVFGS 417
A L+ G D E G + ++ ++ G DD
Sbjct: 1085 AGNNTLLGGAGNDSIEGGDGDDSIDGGSGDDFLDGVAGNNTIFGGDGDDTIFGGDGDDSI 1144
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D G + + + D I L + F + G E
Sbjct: 1145 DGGMGNDRVEGGDGDDLIDGGDGNDTIFGGMGRDTILGGMGDDTLDGGLGEDFLDGGDGE 1204
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
R V D LG + A G + L + L
Sbjct: 1205 DRLVDPDQATLLGGAGNDTITGAGAPIFAD---GGSGDDLIVGGNGNDTLWGGLGSDTLF 1261
Query: 538 NAFADAPDLVQAGKD 552
D D
Sbjct: 1262 GRGGDDLIFGFQPGD 1276
>gi|149201403|ref|ZP_01878378.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
gi|149145736|gb|EDM33762.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
Length = 611
Score = 89.5 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 69/516 (13%), Positives = 131/516 (25%), Gaps = 66/516 (12%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIK 80
++++ V +FD+ + R A EWS+ D+ F +
Sbjct: 33 YWFTDEDPGTSFSVDPASVYTFDV-------EAALRLAFAEWSRYGDIEFLQVQDPGGAA 85
Query: 81 --------------FISSNNGYVCTPRY-DSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ G+ P + +I D + + A+
Sbjct: 86 GGQIDPDIRIFFAPIPGNTLGFAFFPSPLEVPIAGDILLDVDASLNFDVPL---FEGLAI 142
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQ-----DSMMDASFGYC 180
HEIGH+LGL H + D D Y +M
Sbjct: 143 HEIGHSLGLEHIETVAAIMNPILTQPDILADDISGIRQIYGAQDGAAVVYTMPTGLRDLT 202
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNN----IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
D+ + +G + + G+D + + I
Sbjct: 203 LLHNPEDLTVLGNNFGNRITGTDADETLNGLVGNDTLDGGAGDDLLIGGVGNDWAEFSTI 262
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIA--------------------QHTVIESVVGSSG 276
+ + + I + ++GS
Sbjct: 263 ARSAAAFSVVENGLQVVSSLGTDTLIDIEWIQFLDESIRVAEVITAISGPIGLQLIGSGL 322
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQ 335
+D ++G N+ +G+DV G G D+ +I + IV+
Sbjct: 323 SDSLMGTDDNDTLSGGAGDDVLAGGLGNDSL--DGGDGNDRISASDGNDIVFGGLGNDSI 380
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ + + A + + D S G
Sbjct: 381 GGGLGNDTIDGGAGDDIIGGGFGADSITGGAGNDVIAGGADNDTLSGGDGNDSVSGSFGN 440
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
D+ F + G DD+ G D A G EG ++ ++ L
Sbjct: 441 DLIFGN----GGADDIGGGTGRDTIDAGAGDDRVGGGEG-----DDSISGGDGNDFLAGG 491
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+ G D + + D+ L++ S
Sbjct: 492 GRNDTIDGGAGSDTINAGAGNDTITGGVDADLFVFS 527
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 58/220 (26%), Gaps = 9/220 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ G+D LD + N I SIGG N TI
Sbjct: 332 NDTLSGGAGDDVLAGGLGNDSLDGGDGNDRISASDGNDIVFGGLGNDSIGGGLGNDTIDG 391
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G G D + G + N+V + ND G G D+ I+ A
Sbjct: 392 GAGDDIIGGGFGADSITGGAGNDVIAGGADNDTLSGGDGNDSV--SGSFGNDLIFGNGGA 449
Query: 325 IIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ D + +R+ + L + + G D +
Sbjct: 450 DDIGGGTGRDTIDAGAGDDRVGGGEGDDSISGGDGNDFLAGGGRNDTIDGGAGSDTINAG 509
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
D+ F + D+ F +
Sbjct: 510 AGNDTITGGVDADL-FVFSSFFDGEADVITDFEDGIDSFL 548
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/252 (16%), Positives = 71/252 (28%), Gaps = 21/252 (8%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
I +D T+ + LG +G + D
Sbjct: 310 SGPIGLQLIGSGLSDSLMGTDDNDTLSGGAGDDVLAGGLGNDSLDGGDGNDRISASDG-- 367
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
ND + + + D G ++ I G
Sbjct: 368 -NDIVFGGLGNDSIGGGLGNDTIDGGAGDDIIGGGFGADSITGGA----------GNDVI 416
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
T+ G+D ++ G N + IGG TI + V G
Sbjct: 417 AGGADNDTLSGGDGND----SVSGSFGNDLIFGNGGADDIGGGTGRDTIDAGAGDDRVGG 472
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-- 331
G+D + G N+ ND DG +G DT A + I +A + ++
Sbjct: 473 GEGDDSISGGDGNDFLAGGGRNDTIDGGAGSDTI--NAGAGNDTITGGVDADLFVFSSFF 530
Query: 332 EHKQDFLSDVER 343
+ + D ++D E
Sbjct: 531 DGEADVITDFED 542
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/223 (17%), Positives = 58/223 (26%), Gaps = 23/223 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+I G+D +D + SI G N IA
Sbjct: 367 GNDIVFGGLGNDSIGGGLGNDTIDGGAGDDIIGG----GFGADSITGGAGNDVIAGGADN 422
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G GND V G+ N++ F + G D G +G DT A
Sbjct: 423 DTLSGGDGNDSVSGSFGNDLIFGNGGADDIGGGTGRDTI-------------DAGAGDDR 469
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D +S D + ++ A + + G D
Sbjct: 470 VGGGEGDDSISG------GDGNDFLAGGGRNDTIDGGAGSDTINAGAGNDTITGGVDADL 523
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
F S D D D + D + G
Sbjct: 524 FVFSSFFDGEADVITDFEDGIDSFLIRRFDPDTGVENINNGGN 566
>gi|209528057|ref|ZP_03276536.1| Phosphodiesterase/alkaline phosphatase D-like protein [Arthrospira
maxima CS-328]
gi|209491513|gb|EDZ91889.1| Phosphodiesterase/alkaline phosphatase D-like protein [Arthrospira
maxima CS-328]
Length = 723
Score = 89.1 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/224 (20%), Positives = 87/224 (38%), Gaps = 16/224 (7%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
D + Y+A++ D+ A ++ G +HF G + R T +D YL + D+
Sbjct: 6 DFYSESFYLANNPDVAQAV--DLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDV 63
Query: 496 RNVF-GSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ + +H+I G +E R+P F YI + + A +H
Sbjct: 64 AALVNVGAIASGFQHFINFGQREARDPSILFNTDFYINEYPFIQAAIEAGDIT---AIEH 120
Query: 554 FSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG----I 607
F G E S+ +NP+ YL D+ D +HY+ G + R +
Sbjct: 121 FVKAGQFEDFRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNRDFSAFLEV 180
Query: 608 SGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYD 651
+G F S +R+ + + ++ + + + D N+ +
Sbjct: 181 NGSSF-PNRVASGDTRENSTILMARNTVVGPITFETATDPNFDN 223
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 64/173 (36%), Gaps = 10/173 (5%)
Query: 399 FDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
+ YL + D+ + H+I G + R P + L Y+ ++ D+
Sbjct: 8 YSESFYLANNPDVAQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAA-- 65
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ G HF NFG E R + F++ Y+ Y ++ + A H++ G
Sbjct: 66 LVNVGAIASGFQHFINFGQREARDPSILFNTDFYINEYPFIQAAIEAGDITAIEHFVKAG 125
Query: 515 VKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
E P + Y+A + D+ G +H+ + G + R +
Sbjct: 126 QFEDFRPSVLYNPNYYLARNPDVAARVERDELT---GIEHYLDIGAAQNRDFS 175
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 53/284 (18%), Positives = 97/284 (34%), Gaps = 19/284 (6%)
Query: 364 YTASYEDLIQVIGQD-VFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRG 420
Y A+ D+ Q + + +HF E G + R +D YL + D+ +
Sbjct: 13 YLANNPDVAQAVDLGVISSGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALVNVGAI 72
Query: 421 -AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ +H+I G +E R+P F YI + + A +HF G E
Sbjct: 73 ASGFQHFINFGQREARDPSILFNTDFYINEYPFIQAAIEAGDIT---AIEHFVKAGQFED 129
Query: 479 --RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
V ++ YL D+ D HY+ G + R+ AF + + +
Sbjct: 130 FRPSVLYNPNYYLARNPDVAARVERDELTGIEHYLDIGAAQNRDFSAFLEVNGSSFPNRV 189
Query: 537 INAFADAPDLVQAGKDHFSN-FGYEEGRSITFNP--DLYLTSYDDLW---NVFGSDRSAA 590
+ + ++ +E F+ T+ D VF SD +
Sbjct: 190 ASGDTRENSTILMARNTVVGPITFETATDPNFDNVVSTLTTNNSDPTVPVKVFVSDLTPG 249
Query: 591 AQHY--ITHGMKEG-RALGISGMQFKSVMNLSEKSRDKADLSLS 631
++ +T+ M E R + + + S L + + L
Sbjct: 250 TPYFYRVTNAMGESDRGIFRTPLSLGSQGGLRFGAAGDSQGELM 293
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 50/146 (34%), Gaps = 7/146 (4%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ-VIGQDVFESMKHFYEFGLSEGRDI 397
S E + Q L Y + D+ V + +HF FG E RD
Sbjct: 31 SGFEHFIESGQFQVRQPTPLYDELYYLTTNPDVAALVNVGAIASGFQHFINFGQREARDP 90
Query: 398 --TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
F++ Y+ Y ++ + A H++ G E P + Y+A + D+
Sbjct: 91 SILFNTDFYINEYPFIQAAIEAGDITAIEHFVKAGQFEDFRPSVLYNPNYYLARNPDVAA 150
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRF 480
G +H+ + G + R
Sbjct: 151 RVERDELT---GIEHYLDIGAAQNRD 173
>gi|119493848|ref|ZP_01624414.1| type I secretion target repeat protein [Lyngbya sp. PCC 8106]
gi|119452397|gb|EAW33587.1| type I secretion target repeat protein [Lyngbya sp. PCC 8106]
Length = 1518
Score = 89.1 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/240 (15%), Positives = 70/240 (29%), Gaps = 1/240 (0%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ ++ ++ G N I + E I G N I +++ G+ GND++ + N++
Sbjct: 1191 NAVETSIEGTEANDILIGVEISEQIVGLAGNDEINAFGGSDNLFGNIGNDILNAGNGNDI 1250
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
SG DV G G DT + +N ++ E D + L
Sbjct: 1251 ADGGSGEDVLVGGFGSDTLI-GGSENDSLVGGSDNLVLPDTDGEDLLDGGEGDDTLSGNQ 1309
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ + ++ + G D EG D +
Sbjct: 1310 GNDSLIGGEGNDLIYSGKDNDLASGEAGNDTIFGDLGNDTIVGGEGNDFLLGNQGNDIVS 1369
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
N F + + G E + ++ L + + G D
Sbjct: 1370 GGEGNDFIAGGKGDDILFGDQGNDEVYGDLGADVVYGNQGNDSLYGGEDNDTLIGGEGDD 1429
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 46/249 (18%), Positives = 79/249 (31%), Gaps = 23/249 (9%)
Query: 200 GSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWS 251
G++GN+I + G D L + +L+GG N + +T+
Sbjct: 1235 GNIGNDILNAGNGNDIADGGSGEDVLVGGFGSDTLIGGSENDSLVGGSDNLVLPDTDGED 1294
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G E + T++ + +S++G GND++ N++ +GND G G DT
Sbjct: 1295 LLDGGEGDDTLSGNQGNDSLIGGEGNDLIYSGKDNDLASGEAGNDTIFGDLGNDTIV--G 1352
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD----------QCIDSVNVKQRSI 361
+ + IV + + + F D +
Sbjct: 1353 GEGNDFLLGNQGNDIVSGGEGNDFIAGGKGDDILFGDQGNDEVYGDLGADVVYGNQGNDS 1412
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L + LI G D + EG DI L L S D+ F +
Sbjct: 1413 LYGGEDNDTLIGGEGDDFLSGDQGDDILFGGEGSDI---FALLLNSGSDVIVDFTDSQDL 1469
Query: 422 AARHYITHG 430
Sbjct: 1470 LGLSIGLSF 1478
Score = 84.1 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 69/264 (26%), Gaps = 24/264 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-----KNYIDLNTESWSSIGGYEKNMTIAQ 264
+ I G+D ++ N I G +
Sbjct: 1203 NDILIGVEISEQIVGLAGNDEINAFGGSDNLFGNIGNDILNAGNGNDIADGGSGEDVLVG 1262
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++++G S ND ++G S N V ++ G D+ DG G DT + E
Sbjct: 1263 GFGSDTLIGGSENDSLVGGSDNLVLPDTDGEDLLDGGEGDDTL--SGNQGNDSLIGGEGN 1320
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++Y ++ F D + + L+ G D+ +
Sbjct: 1321 DLIYSGKDNDLASGEAGNDTIFGD--------LGNDTIVGGEGNDFLLGNQGNDIVSGGE 1372
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+G DI F Y DL Y G + L
Sbjct: 1373 GNDFIAGGKGDDILFGDQGNDEVYGDLGADV---------VYGNQGNDSLYGGEDNDTLI 1423
Query: 445 YIASHEDLINAFADAPDLVQVGKD 468
+ L D G D
Sbjct: 1424 GGEGDDFLSGDQGDDILFGGEGSD 1447
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 73/256 (28%), Gaps = 13/256 (5%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+SI G E N + + E +VG +GND + ++ F + GND+ + +G D
Sbjct: 1195 TSIEGTEANDILIGVEISEQIVGLAGNDEINAFGGSDNLFGNIGNDILNAGNGNDIA--D 1252
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF--ADQCIDSVNVKQRSILEYTASY 368
S + + + +E+ + + L D + L
Sbjct: 1253 GGSGEDVLVGGFGSDTLIGGSENDS-LVGGSDNLVLPDTDGEDLLDGGEGDDTLSGNQGN 1311
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ LI G D+ S K G D F D + G+D +
Sbjct: 1312 DSLIGGEGNDLIYSGKDNDLASGEAGNDTIFGDLG----NDTIVGGEGNDFLLGNQGNDI 1367
Query: 429 HGVKEGRN----PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
EG + L ++++ G D +
Sbjct: 1368 VSGGEGNDFIAGGKGDDILFGDQGNDEVYGDLGADVVYGNQGNDSLYGGEDNDTLIGGEG 1427
Query: 485 SYLYLGSYDDLRNVFG 500
G D G
Sbjct: 1428 DDFLSGDQGDDILFGG 1443
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/275 (14%), Positives = 78/275 (28%), Gaps = 14/275 (5%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP- 145
D+ G G + + G +
Sbjct: 1219 AGNDEINAFGGSDNLFGNIGNDILNAGNGNDIADGGSGEDVLVGGFGSDTLIGGSENDSL 1278
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG-- 203
V G DN D+ ++ D++ + + + + + G
Sbjct: 1279 VGGSDNLVLPDTDGEDLLDGGEGDDTLSGNQG--NDSLIGGEGNDLIYSGKDNDLASGEA 1336
Query: 204 --NNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ I+ + + G+D++ GG N + + G + N
Sbjct: 1337 GNDTIFGDLGNDTIVGGEGNDFLLGNQGNDIV----SGGEGNDFIAGGKGDDILFGDQGN 1392
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + V G+ GND + G N+ G+D G G D F S ++ +
Sbjct: 1393 DEVYGDLGADVVYGNQGNDSLYGGEDNDTLIGGEGDDFLSGDQGDDILFGGEGSDIFALL 1452
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+ ++ D QD L L F + I+
Sbjct: 1453 LNSGSDVIVD-FTDSQDLLGLSIGLSFDELTIEQG 1486
>gi|291567289|dbj|BAI89561.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 2881
Score = 89.1 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 80/280 (28%), Gaps = 24/280 (8%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
I I+ + TI S +D +D G + I + G + +I +
Sbjct: 171 IITIQGSGVGTEGNDTILGSDLNDAID----GLSGDNIIFGLGGDDFLRGGDGADSINGN 226
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+++ G G+D + G N++ F GND+ G DT F A S +Y +
Sbjct: 227 AGNDTIYGGGGDDCLRGGQGNDLIFGEGGNDLLFGDKDADTLF--AVSGNNTMYGGQGND 284
Query: 326 IVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ L F D V + L A + L G D+
Sbjct: 285 SLIGGENDD---------LMFGDKGNDTLVAGGGNNTLYGGADNDFLFGGTGNDLLFGDD 335
Query: 385 HFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
E +G D F D ++ G +D+ + R + G
Sbjct: 336 GNDELVGGKGNDTIFGGPGDDIIFGGDGNDILRGGKGN----DRIFGDEGNDLLEGGRGV 391
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
L + + + G
Sbjct: 392 DTLTGGGGRNIFVVGLIVSASEGGGSVITATTGGASPELA 431
Score = 47.1 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 31/75 (41%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G E + ++++G GND ++G N+ G+D G +G + F Y
Sbjct: 2699 QTVTGGEFGDFLTGGAGNDTLIGLGGNDTLLGLGGNDTLVGGLGSDSLVGGAGNNRFLYQ 2758
Query: 311 APSYLYKIYRFENAI 325
+P ++
Sbjct: 2759 SPDDGGGTAFNADST 2773
Score = 42.9 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 50/209 (23%), Gaps = 23/209 (11%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
+ + ++ + + + G D + G D Y
Sbjct: 179 VGTEGNDTILGSDLNDAIDGLSGDNIIFGLGGDDFLRGGDGADSINGNAGNDTI-----Y 233
Query: 405 LGSYDD-LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
G DD LR G+D EG N F + + L +
Sbjct: 234 GGGGDDCLRGGQGNDLI----------FGEGGNDLLFGDKDA----DTLFAVSGNNTMYG 279
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
G D ++ F + + + G+D + G D
Sbjct: 280 GQGNDSLIGGENDDLMFGDKGNDTLVAGGGNNTLYGGADNDFL---FGGTGNDLLFGDDG 336
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKD 552
L ++ + D G D
Sbjct: 337 NDELVGGKGNDTIFGGPGDDIIFGGDGND 365
>gi|259415257|ref|ZP_05739179.1| hemolysin-type calcium-binding region [Silicibacter sp. TrichCH4B]
gi|259349167|gb|EEW60921.1| hemolysin-type calcium-binding region [Silicibacter sp. TrichCH4B]
Length = 1043
Score = 89.1 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/398 (14%), Positives = 104/398 (26%), Gaps = 64/398 (16%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ I GG+DLLD ++ GG + I L + G TI+
Sbjct: 354 GDDTLLGGLGSDVIMGQGGNDLLDGGEGDDSIDGGEGDDILLGGAGADVLMGGIGGDTIS 413
Query: 264 ------------------QHTVIESVVGSSGNDVVIGNSANNVFFESSG---------ND 296
++++G +GND + ++ ++ G ND
Sbjct: 414 GGDGDDLIDGGEGDDSLSTGLGNDTLLGGAGNDTLHNSAGDDSLVGGEGDDSIVATEGND 473
Query: 297 VFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFAD 348
+G G DT + S ++ ++Y + + S + +
Sbjct: 474 TLEGGEGNDTLYAGVDDDHLDGGSGNDSMFGEAGHDVMYGRSGADHMEGGSGNDTIDGGA 533
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
++ + L G D + R+ D L GS
Sbjct: 534 DDDTISGGDGDDLIYGGLGNDSLTTGSGNDTLYGGEGNDTL-----RNSVGDDSLVGGSG 588
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
DD + G + L A + + ++
Sbjct: 589 DDSIVATDGNDTLD----GGSGNDIMYGGNDSDLLIGGAGDDVMQGEADADTFRIEDNFG 644
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
+ FG E G+ Y+ + G + G T E +
Sbjct: 645 NDKIFGGEAGKDHDVIDLSYM-TGPVTVTYTGYESGTITDGTDTIRFSEIEELILTDEDD 703
Query: 529 YI--------------ASHEDLINAFADAPDLVQAGKD 552
+ A ++ LI D AG D
Sbjct: 704 VVDAREDSAGVQINAGAGNDTLIGGSGDDRFTGGAGDD 741
Score = 83.7 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/372 (13%), Positives = 99/372 (26%), Gaps = 33/372 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
H D + + + D G G +L + +G
Sbjct: 352 DHGDDTLLGGLGS--DVIMGQGGNDLLDGGEGDDSIDGGEGDDILLGGAGADVLMGGIGG 409
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFL-TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+G + G + D + L + D++ +++ D V
Sbjct: 410 DTISGGDGDDLIDGGEGDDSLSTGLGNDTLLGGAGNDTLHNSAGDDSLVGGEGDDSIV-- 467
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
A +G+ + + G+D ++ G + + +
Sbjct: 468 ---ATEGNDTLEGGEGNDTLYAGVDDDHLDGGSGND----SMFGEAGHDVMYGRSGADHM 520
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N TI +++ G G+D++ G N+ SGND G G DT
Sbjct: 521 EGGSGNDTIDGGADDDTISGGDGDDLIYGGLGNDSLTTGSGNDTLYGGEGNDTLRNSVGD 580
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+++I+ D I+ + LI
Sbjct: 581 DSLVGGSGDDSIVA-------------------TDGNDTLDGGSGNDIMYGGNDSDLLIG 621
Query: 374 VIGQDVFESMKHFYEFGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G DV + F + + G D F + Y + +
Sbjct: 622 GAGDDVMQGEADADTFRIEDNFGNDKIFGGEAGKDHDVIDLSYMTGPVTVTYTGYESGTI 681
Query: 432 KEGRNPDAFKAL 443
+G + F +
Sbjct: 682 TDGTDTIRFSEI 693
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 52/316 (16%), Positives = 93/316 (29%), Gaps = 31/316 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S D G TI + I LG
Sbjct: 494 DGGSGNDSMFGEAGHDVMYGRSGADHMEGGSGNDTIDGGADDDTISGGDGDDLIYGGLGN 553
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ +G +YG + ND+ SV + S D+ + +
Sbjct: 554 DSLTTGSGNDTLYGGEG---NDTLRNSVGDDSLVGGSGDDSIVATDGNDTLDGGSGNDIM 610
Query: 195 YGAPKGS-----LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL---- 245
YG G+++ + E I D+ G+D + G + IDL
Sbjct: 611 YGGNDSDLLIGGAGDDVMQGEADADT----FRIEDNFGNDKIFGGEAGKDHDVIDLSYMT 666
Query: 246 NTESWSSIGGYEKNMTIAQHTV----IESVVGSSGNDV-----------VIGNSANNVFF 290
+ + G +T T+ IE ++ + +DV + + N+
Sbjct: 667 GPVTVTYTGYESGTITDGTDTIRFSEIEELILTDEDDVVDAREDSAGVQINAGAGNDTLI 726
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
SG+D F G +G D + +I F+ + D + Q +SD+
Sbjct: 727 GGSGDDRFTGGAGDDKIALTSSGGTDRITDFDTSDNDDDGYYNDQLDVSDLTGGSGTGGM 786
Query: 351 IDSVNVKQRSILEYTA 366
+ + +V A
Sbjct: 787 VRTSDVTTSDDGYGNA 802
Score = 46.7 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 34/260 (13%), Positives = 58/260 (22%), Gaps = 24/260 (9%)
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSD---VERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + VY +H D L + + + ++ +
Sbjct: 334 SGFTLSGDLIEDAVYTPIDHGDDTLLGGLGSDVIMGQGGNDLLDGGEGDDSIDGGEGDDI 393
Query: 371 LIQVIGQDVFESMKHFYEFG--------------LSEGRDITFDSYLYLGSYDDLRNVFG 416
L+ G DV S + D+ L D L N G
Sbjct: 394 LLGGAGADVLMGGIGGDTISGGDGDDLIDGGEGDDSLSTGLGNDTLLGGAGNDTLHNSAG 453
Query: 417 SDRGAAARH----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
D T G + L + L + + G D
Sbjct: 454 DDSLVGGEGDDSIVATEGNDTLEGGEGNDTLYAGVDDDHLDGGSGNDSMFGEAGHDVMYG 513
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
+ + D + G D Y G L
Sbjct: 514 RSGADHMEGG-SGNDTIDGGADDDTISGGDGDDLI--YGGLGNDSLTTGSGNDTLYGGEG 570
Query: 533 HEDLINAFADAPDLVQAGKD 552
++ L N+ D + +G D
Sbjct: 571 NDTLRNSVGDDSLVGGSGDD 590
>gi|242279544|ref|YP_002991673.1| hemolysin-type calcium-binding region [Desulfovibrio salexigens DSM
2638]
gi|242122438|gb|ACS80134.1| hemolysin-type calcium-binding region [Desulfovibrio salexigens DSM
2638]
Length = 736
Score = 89.1 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 65/405 (16%), Positives = 123/405 (30%), Gaps = 25/405 (6%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E +I SD N + D D G G I I
Sbjct: 297 VEKAIGSDDANTIIGNAENNIIYGNGGNDTLEGGDGNDQLIGGAGADVIKGGKGDDIIAA 356
Query: 131 A-----LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+ + + N + + + ++ + +G +
Sbjct: 357 DNDDTLVDGGEGNDIAVVNGSFNMANTTSVEVVQGGTAADTVVGNAENNIIYGNGGNDTL 416
Query: 186 SDIVAVQKIYGAP-----KGSLGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLLDLTL-- 235
++ G KG G++++ + + ++ +G D+ + T
Sbjct: 417 EGGAGNDQLIGGAGADILKGGAGDDVFSADNEDILVDGGEGTDSLVVNGSFDMANTTSVE 476
Query: 236 --IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
GG + + I G N TI+ + +VG SG+D + G + N+V S
Sbjct: 477 KVFGGTAADTVVGNAEDNMIWGNGGNDTISGGAGNDQLVGGSGDDTLDGGADNDVLLGGS 536
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G DV G +G+D Y A S + + + D LS++E ++ +
Sbjct: 537 GADVLKGGAGVDVADYSASSAAVTVNLTAGTGT---GGDAQGDTLSEIESVQGSAFNDTI 593
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+IL ++L+ + G D+ G D G+ DD+
Sbjct: 594 AGAANGNILYGGNGNDNLLGLGGDDILNGGAGNDALYGGSGTDHLLG-----GAGDDIYV 648
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
++ G D Y ++ LI A +
Sbjct: 649 FQKGNQNDVIYEDANGGNDTAYIKDFTSVGIYKNGNDLLIAANEN 693
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/368 (14%), Positives = 102/368 (27%), Gaps = 30/368 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSS---------I 253
++ GDD+L D + GG + + + S
Sbjct: 152 GGNDVLIGGAGADRLFGGAGDDILIADAQDKRIDGGAGHDVLVVDGKMSDDAIIVGIEEF 211
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N TI +++ G SGND + G N+ +G DV G G A +
Sbjct: 212 RGGDGNDTINGTVGNDTIYGGSGNDTINGGDGNDQLIGGAGADVIKGGKGD--DIIAADN 269
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ E + + +VE+ +D + + +I+ + L
Sbjct: 270 DDTLVDGGEGTDSLSVSGSFNMVNTVNVEKAIGSDDANTIIGNAENNIIYGNGGNDTLEG 329
Query: 374 VIGQDVFESMKHFYEFGLSEG----RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
G D +G D+ + G +D+ V GS A
Sbjct: 330 GDGNDQLIGGAGADVIKGGKGDDIIAADNDDTLVDGGEGNDIAVVNGSFNMANTTSVEVV 389
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+ A + A + + + G D + ++
Sbjct: 390 -----QGGTAADTVVGNAENNIIYGNGGNDTLEGGAGNDQLIGGAGADILKGGAGDDVFS 444
Query: 490 GSYDDLRNVFGSDRGAAARH-----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
+D+ G + + T V++ A + A + +
Sbjct: 445 ADNEDILVDGGEGTDSLVVNGSFDMANTTSVEKVFGGTAADTVVGNAEDNMIWGNGGNDT 504
Query: 545 DLVQAGKD 552
AG D
Sbjct: 505 ISGGAGND 512
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 61/492 (12%), Positives = 123/492 (25%), Gaps = 65/492 (13%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
D D +G TI + I G G + G D +
Sbjct: 213 GGDGNDTINGTVGNDTIYGGSGNDTINGGDGNDQLIGGAGADVIKGGKGDDIIAADNDDT 272
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAV-QKIYGAPKGSLGNNIY---KIEVQQKDSPF 218
+ + S + V+ A+ G+ NNI +
Sbjct: 273 LVDGGEGTDSLSVSGSFNMVNTVNVEKAIGSDDANTIIGNAENNIIYGNGGNDTLEGGDG 332
Query: 219 IQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMT-------IAQH 265
+ G D++ D+ +D + ++ NM +
Sbjct: 333 NDQLIGGAGADVIKGGKGDDIIAADNDDTLVDGGEGNDIAVVNGSFNMANTTSVEVVQGG 392
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKI 318
T ++VVG++ N+++ GN N+ +GND G +G D + A + +
Sbjct: 393 TAADTVVGNAENNIIYGNGGNDTLEGGAGNDQLIGGAGADILKGGAGDDVFSADNEDILV 452
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
E + + VE++ V + +++ + + G D
Sbjct: 453 DGGEGTDSLVVNGSFDMANTTSVEKVFGGTAADTVVGNAEDNMIWGNGGNDTISGGAGND 512
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
D+ G +
Sbjct: 513 QLVGGSGDDTLDGGADNDVLL---------------------------GGSGADVLKGGA 545
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+Y AS + + + E + F+ + + ++
Sbjct: 546 GVDVADYSASSAAVTVNLTAGTGTGGDAQGDTLSE-IESVQGSAFNDTIAGAANGNIL-- 602
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
Y +G L A ++ L L AG D +
Sbjct: 603 -----------YGGNGNDNLLGLGGDDILNGGAGNDALYGGSGTDHLLGGAGDDIYVFQK 651
Query: 559 YEEGRSITFNPD 570
+ I + +
Sbjct: 652 GNQNDVIYEDAN 663
>gi|149202556|ref|ZP_01879528.1| hypothetical protein RTM1035_08064 [Roseovarius sp. TM1035]
gi|149143838|gb|EDM31872.1| hypothetical protein RTM1035_08064 [Roseovarius sp. TM1035]
Length = 951
Score = 89.1 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/381 (14%), Positives = 104/381 (27%), Gaps = 18/381 (4%)
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
+FI + T + I D+ GIG + + A L G
Sbjct: 558 RFILNGGAGDDTLNGGAGDDRLIGGLGDDLMLGGIGDDVAVFEGVTFD-TVAFSLTPGGL 616
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
D E F +S + +M+ + M D + +
Sbjct: 617 RVVSALGIDDLTDVEWMEFADQTVSVAEVRVAMLGFPGDFV---MAGDAGEMLFGTDSDD 673
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+G + + ++ G+D + + N L IGG N
Sbjct: 674 TLIGGD---GDDIISGGLGNDSLDGGAGNDRISAS----DGNDFILGGPGNDDIGGGPGN 726
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI + + G G D ++G N+V + ND G +G D+ I+
Sbjct: 727 DTINGGEGDDIIGGGFGADSILGGDGNDVVAGGADNDTLSGGAGNDSI--SGSFGSDLIF 784
Query: 320 RFENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ A + QD ++ + + + + L + + G
Sbjct: 785 GNDGADDI--GGGTGQDTINAGAGDDSVGGGEGNDSILGEDGNDFLAGGGRDDTINGGTG 842
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D G D S + G D + + R + E
Sbjct: 843 DDTINGGSGSDRMSGGAGTDQFVFSSFFDGEVDVITDFEDGVDSFFIRRFDPDTGFENIT 902
Query: 437 PDAFKALEYIASHEDLINAFA 457
+ ++A+ A
Sbjct: 903 NGGNGLVGFLAALSITDTAAG 923
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/346 (15%), Positives = 90/346 (26%), Gaps = 49/346 (14%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +G+D + G + ++ G+D+ G G D + ++ + +
Sbjct: 561 LNGGAGDDTLNGGAGDDRLIGGLGDDLMLGGIGDDVAVFEGVTFDTVAFSLTPGGLRVV- 619
Query: 331 NEHKQDFLSDVERLRFADQCIDSV------------------------NVKQRSILEYTA 366
+ D L+DVE + FADQ + L
Sbjct: 620 SALGIDDLTDVEWMEFADQTVSVAEVRVAMLGFPGDFVMAGDAGEMLFGTDSDDTLIGGD 679
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + +G D + S+G D DD+ G+D
Sbjct: 680 GDDIISGGLGNDSLDGGAGNDRISASDGNDFILGGPG----NDDIGGGPGNDTINGGEGD 735
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
G G + D++ AD L + + D
Sbjct: 736 DIIGGGFGADSILGGDGN------DVVAGGADNDTLSGGAGNDSISGSFGSDLIFGNDGA 789
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP----DAFKALEYIASHEDLINAFAD 542
DD+ G D A + G EG + D L + + D
Sbjct: 790 ------DDIGGGTGQDTINAGAGDDSVGGGEGNDSILGEDGNDFLAGGGRDDTINGGTGD 843
Query: 543 APDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRS 588
+G D G F + D+ F
Sbjct: 844 DTINGGSGSD--RMSGGAGTDQFVF--SSFFDGEVDVITDFEDGVD 885
>gi|227357928|ref|ZP_03842273.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
gi|227161873|gb|EEI46898.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
Length = 392
Score = 89.1 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 70/247 (28%), Gaps = 82/247 (33%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISS-----------------NNGYVCT 91
P+ QEV L S DLTF I + N G+
Sbjct: 137 PHQQEVITEILQLASDFADLTFTRVPIQKNANLKFGYFNHFYKDSTTFFMTRGNGGFAQY 196
Query: 92 PRYDS------------------------------------RYFMEINFDKADVWRYGIG 115
P Y+ ++E + D++ Y
Sbjct: 197 PNYNGTPIKEIGPNEDYDIPGTIFINLATHEFYKWENGDNIDKYIENEANPGDLYNYHDN 256
Query: 116 K----------------------GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
G+ +HE+GHALGLMH Y +
Sbjct: 257 NQVAIIKSTDVLLNETMKSKHKLGSYEYLCFIHELGHALGLMHINVYLKNIKNDAIL--- 313
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ 212
++ SVM+Y D + Y T M+ DI+ +Q +YG L NN Y
Sbjct: 314 ---TYKYSVMAYQFADIKDADFAGLYPMTFMLVDILLLQYLYGPNMTTRLENNTYGFHSN 370
Query: 213 QKDSPFI 219
+ +
Sbjct: 371 TGRAAYS 377
>gi|222148481|ref|YP_002549438.1| hypothetical protein Avi_2010 [Agrobacterium vitis S4]
gi|221735469|gb|ACM36432.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 678
Score = 89.1 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 14/126 (11%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD Y + S AA H++ G +G P+A F Y++ ++D+ N+
Sbjct: 561 FDFDFYCSQLKNALITPPSAPIDAALHFVKAGFSQGLWPNAFFDTHWYLSQYDDIRNS-G 619
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
P H+ G++E R + F+ YL +Y D+ QH++ HG
Sbjct: 620 INPLW------HYHINGWKERRDPSRKFSTAFYLAAYPDIQVA----NINPLQHFLRHGQ 669
Query: 600 KEGRAL 605
EGR++
Sbjct: 670 HEGRSI 675
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 379 VFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
++ HF + G S+G FD++ YL YDD+RN HY +G KE R+
Sbjct: 581 PIDAALHFVKAGFSQGLWPNAFFDTHWYLSQYDDIRNS----GINPLWHYHINGWKERRD 636
Query: 437 PD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
P F Y+A++ D+ A + HF G EGR +
Sbjct: 637 PSRKFSTAFYLAAYPDIQVANINP-------LQHFLRHGQHEGRSI 675
>gi|217978852|ref|YP_002362999.1| glycosyl transferase family 2 [Methylocella silvestris BL2]
gi|217504228|gb|ACK51637.1| glycosyl transferase family 2 [Methylocella silvestris BL2]
Length = 756
Score = 89.1 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 65/228 (28%), Gaps = 37/228 (16%)
Query: 385 HFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
H+ G+ EG FD Y R V YI G G +P + +
Sbjct: 46 HYLVEGVFEGARPHLLFDPDWY-------RTVASCKAANPLIDYIKSGAAAGFDPSPYFS 98
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE--EGRFVTFDSYLYLGSYDDLRNVFG 500
Y + HF +G FD YL D+
Sbjct: 99 SAYYRKSAGALRGLT--------PLGHFIAYGLPCNATPTPLFDRDWYLAHNPDVMRAGF 150
Query: 501 SDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
H++ G ++GR+P F A Y + + +A H+ + G
Sbjct: 151 D----PFLHFVASGARDGRSPGPLFDAPWYRMKNPGVRDA-------GVEPLRHYLSRGA 199
Query: 560 EEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
EGR F+P Y+ A Y G R+
Sbjct: 200 AEGRRPHDGFDPVFYVAQAPHA----SVTLEQALADYAEQGRANWRSA 243
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 47/174 (27%), Gaps = 32/174 (18%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLR 496
F Y + H+ G EG FD Y +
Sbjct: 23 IFDEDWYRKEYPAFEMGELGPIM-------HYLVEGVFEGARPHLLFDPDWYRT----VA 71
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ ++ YI G G +P F + Y S HF
Sbjct: 72 SCKAANP---LIDYIKSGAAAGFDPSPYFSSAYYRKS---------AGALRGLTPLGHFI 119
Query: 556 NFGY--EEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
+G + F+ D YL D+ H++ G ++GR+ G
Sbjct: 120 AYGLPCNATPTPLFDRDWYLAHNPDVMRA----GFDPFLHFVASGARDGRSPGP 169
>gi|71275981|ref|ZP_00652263.1| Hemolysin-type calcium-binding region:Glycosyl hydrolase, BNR
repeat:Haemolysin-type calcium binding related [Xylella
fastidiosa Dixon]
gi|71899076|ref|ZP_00681241.1| Hemolysin-type calcium-binding region:Glycosyl hydrolase, BNR
repeat:Haemolysin-type calcium binding related [Xylella
fastidiosa Ann-1]
gi|71163214|gb|EAO12934.1| Hemolysin-type calcium-binding region:Glycosyl hydrolase, BNR
repeat:Haemolysin-type calcium binding related [Xylella
fastidiosa Dixon]
gi|71731189|gb|EAO33255.1| Hemolysin-type calcium-binding region:Glycosyl hydrolase, BNR
repeat:Haemolysin-type calcium binding related [Xylella
fastidiosa Ann-1]
Length = 1642
Score = 89.1 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 77/565 (13%), Positives = 142/565 (25%), Gaps = 93/565 (16%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
N T + M AD G G T+ A+G+
Sbjct: 980 DGGHSDDTLIGNAGDDTLFGGTGNDMLSGGKGADTLDGGSGNDTLNGGTGNDTYRFAIGV 1039
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ D D T++ + + ++ D + V +
Sbjct: 1040 GVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKYG-------TGDQLTVIEY 1092
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ G I + + +D +T NY+ + I
Sbjct: 1093 F--NPNYSGYKIEQFTFSDGVT------WDEAAIKARVITNGDASNNYLRGYNNGSNCIY 1144
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N I + + + G +GND++ G + SGNDV G +G DT+ + +
Sbjct: 1145 GLDGNDEIYGGALDDMLYGGAGNDMLSGGKGADTLDGGSGNDVLYGGTGNDTYRFAIGAG 1204
Query: 315 LYKIYRFE-------------------------NAIIVYDANEHKQDFLSD--------V 341
+ +I + ++ +V Q +S+ V
Sbjct: 1205 VDRIEESDTTAGNTDVVRFADVASTALTALERKDSDLVIKYGTSDQLTISNYFYSAEYKV 1264
Query: 342 ERLRFA-----------------------------DQCIDSVNVKQRSILEYTASYEDLI 372
E+ F+ D + + A + L
Sbjct: 1265 EQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGSNRIYGLDGNDEIYGGALNDMLY 1324
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D+ K G D+ + D R G+ T G
Sbjct: 1325 GGAGNDMLSGGKGADTLDGGSGNDVLYGGTG----NDMYRFAIGAGVDRIEESDTTAGNT 1380
Query: 433 EGRNPDAFKALEYIA---SHEDLINAFADA-----PDLVQVGKDHFSNFGCEEGRFVTFD 484
+ + A DL+ + + + + F +G
Sbjct: 1381 DVVRFADVASTALTALERKDSDLVIKYGTSDQLTISNYFYSAEYKVEQFTFSDGVTWDEA 1440
Query: 485 SYLYLG-SYDDLRNVFGSDRGAAA-RHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
+ + D N + + R Y G E L A ++ L
Sbjct: 1441 AIKARVITNGDASNNYLRGYNDGSNRIYGLDGNDEIYGGALDDMLYGGAGNDMLSGGKGA 1500
Query: 543 APDLVQAGKDHFSNFGYEEGRSITF 567
+G D +G F
Sbjct: 1501 DTLDGGSGND--VLYGGTGNDMYRF 1523
Score = 88.3 bits (217), Expect = 3e-15, Method: Composition-based stats.
Identities = 70/572 (12%), Positives = 139/572 (24%), Gaps = 95/572 (16%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D + M AD G G T+ A+G+
Sbjct: 803 DGNDEIYGGALADILDGGAGNDMLSGGGGADTLDGGSGNDTLNGGTGNDTYRFAIGVGVD 862
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+ D D T++ + + ++ D + + + +
Sbjct: 863 RIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKYG-------TGDQLTISNYFYS 915
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG-- 255
+ + + V ++ + +G L N I + + GG
Sbjct: 916 AEYKVEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGSNRIYGLDGNDTIYGGAL 975
Query: 256 ------YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ T+ + +++ G +GND++ G + SGND +G +G DT+ +
Sbjct: 976 ADILDGGHSDDTLIGNAGDDTLFGGTGNDMLSGGKGADTLDGGSGNDTLNGGTGNDTYRF 1035
Query: 310 YAPSYLYKIYRFE---NAIIVYDANEHKQDFLSD-------------------------- 340
+ +I + V + L+
Sbjct: 1036 AIGVGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKYGTGDQLTVIEYFNP 1095
Query: 341 ------VERLRFAD-----------------------------QCIDSVNVKQRSILEYT 365
+E+ F+D + +
Sbjct: 1096 NYSGYKIEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNNGSNCIYGLDGNDEIYGG 1155
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A + L G D+ K G D+ + D R G+
Sbjct: 1156 ALDDMLYGGAGNDMLSGGKGADTLDGGSGNDVLYGGTG----NDTYRFAIGAGVDRIEES 1211
Query: 426 YITHGVKEGRNPDAFKALEYIA---SHEDLINAFADA-----PDLVQVGKDHFSNFGCEE 477
T G + + A DL+ + + + + F +
Sbjct: 1212 DTTAGNTDVVRFADVASTALTALERKDSDLVIKYGTSDQLTISNYFYSAEYKVEQFTFSD 1271
Query: 478 GRFVTFDSYLYLG-SYDDLRNVFGSDRGAAA-RHYITHGVKEGRNPDAFKALEYIASHED 535
G + + D N + + R Y G E L A ++
Sbjct: 1272 GVTWDEAAIKARVITNGDASNNYLRGYNDGSNRIYGLDGNDEIYGGALNDMLYGGAGNDM 1331
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
L +G D +G F
Sbjct: 1332 LSGGKGADTLDGGSGND--VLYGGTGNDMYRF 1361
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 79/588 (13%), Positives = 139/588 (23%), Gaps = 108/588 (18%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
++ SD+ +S N + + I D G+G + +
Sbjct: 626 TLGSDLLVGTSGNDLIRGGGNGEGNDVLIGKGGNDELSGGLGDDILDGGTGNDVL----- 680
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G Y D S + T + +
Sbjct: 681 -----YGGTGNDTYRFAIGAGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVI 735
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTI------YDSGGDDLLDLTLIGGVKNYIDLNT 247
YG ++ D+ Q + +D ++ N I
Sbjct: 736 KYGTGDQLTISS--YFHPGFSDAKIEQFMFSDGVTWDEAAIKARVISNGDASNNTIIGYK 793
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + I G + N I + + + G +GND++ G + SGND +G +G DT+
Sbjct: 794 DGSNRIYGLDGNDEIYGGALADILDGGAGNDMLSGGGGADTLDGGSGNDTLNGGTGNDTY 853
Query: 308 FYYAPSYLYKIYRFEN-------------------------AIIVYDANEHKQDFLSD-- 340
+ + +I ++ +V Q +S+
Sbjct: 854 RFAIGVGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKYGTGDQLTISNYF 913
Query: 341 ------VERLRFADQC--------------------------------------IDSVNV 356
VE+ F+D
Sbjct: 914 YSAEYKVEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGSNRIYGLDGNDTIYGG 973
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----FDSYLYLGSYDDL 411
IL+ S + LI G D +G D D+ D
Sbjct: 974 ALADILDGGHSDDTLIGNAGDDTLFGGTGNDMLSGGKGADTLDGGSGNDTLNGGTGNDTY 1033
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA---SHEDLINAFADAPDLV----- 463
R G T G + + A DL+ + L
Sbjct: 1034 RFAIGVGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKYGTGDQLTVIEYF 1093
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLG---SYDDLRNVFGSDRGAAAR-HYITHGVKEGR 519
+ VT+D + D N + + Y G E
Sbjct: 1094 NPNYSGYKIEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNNGSNCIYGLDGNDEIY 1153
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
L A ++ L +G D +G + F
Sbjct: 1154 GGALDDMLYGGAGNDMLSGGKGADTLDGGSGND--VLYGGTGNDTYRF 1199
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 79/270 (29%), Gaps = 3/270 (1%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T+ + ++ N D+ G G + +
Sbjct: 1286 TNGDASNNYLRGYNDGSNRIYGLDGNDEIYGGALNDMLYGGAGNDMLSGGKGADTLDGGS 1345
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G +Y D S + T + +
Sbjct: 1346 GNDVLYGGT-GNDMYRFAIGAGVDRIEESDTTAGNTDVVRFADVASTALTALERKDSDLV 1404
Query: 193 KIYGAPKG-SLGNNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLTLIGGVKNYIDLNTESW 250
YG ++ N Y E + + F + +D +T NY+ +
Sbjct: 1405 IKYGTSDQLTISNYFYSAEYKVEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGS 1464
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ I G + N I + + + G +GND++ G + SGNDV G +G D + +
Sbjct: 1465 NRIYGLDGNDEIYGGALDDMLYGGAGNDMLSGGKGADTLDGGSGNDVLYGGTGNDMYRFA 1524
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + +I ++ D Q +
Sbjct: 1525 IGAGVDRIEDYDTTTGNADVLSIGQGVSIN 1554
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 60/429 (13%), Positives = 102/429 (23%), Gaps = 85/429 (19%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T+ + ++ N D+ G G + +
Sbjct: 1124 TNGDASNNYLRGYNNGSNCIYGLDGNDEIYGGALDDMLYGGAGNDMLSGGKGADTLDGGS 1183
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G Y D S + T + +
Sbjct: 1184 GNDVLYGGT-GNDTYRFAIGAGVDRIEESDTTAGNTDVVRFADVASTALTALERKDSDLV 1242
Query: 193 KIYGAPKG-SLGNNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLTLIGGVKNYIDLNTESW 250
YG ++ N Y E + + F + +D +T NY+ +
Sbjct: 1243 IKYGTSDQLTISNYFYSAEYKVEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGS 1302
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG---------- 300
+ I G + N I + + + G +GND++ G + SGNDV G
Sbjct: 1303 NRIYGLDGNDEIYGGALNDMLYGGAGNDMLSGGKGADTLDGGSGNDVLYGGTGNDMYRFA 1362
Query: 301 -SSGLDTF--------------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD----- 340
+G+D F S +++ +V Q +S+
Sbjct: 1363 IGAGVDRIEESDTTAGNTDVVRFADVASTALTALERKDSDLVIKYGTSDQLTISNYFYSA 1422
Query: 341 ---VERLRFADQ-----------------------------------------------C 350
VE+ F+D
Sbjct: 1423 EYKVEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGSNRIYGLDGNDEIYGGALD 1482
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY--EFGLSEGRDITFDSYLYLGSY 408
+L + L G DV F + G D D G+
Sbjct: 1483 DMLYGGAGNDMLSGGKGADTLDGGSGNDVLYGGTGNDMYRFAIGAGVDRIEDYDTTTGNA 1542
Query: 409 DDLRNVFGS 417
D L G
Sbjct: 1543 DVLSIGQGV 1551
>gi|317047360|ref|YP_004115008.1| family 2 glycosyl transferase [Pantoea sp. At-9b]
gi|316948977|gb|ADU68452.1| glycosyl transferase family 2 [Pantoea sp. At-9b]
Length = 1419
Score = 89.1 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 57/177 (32%), Gaps = 33/177 (18%)
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-------- 522
E V D YL +Y D+ HY+ +G EGR P
Sbjct: 420 VAPAAPEATHVEVDREWYLQTYPDVSGSG----VEPEEHYLNYGKAEGRYPTQNAFLQSE 475
Query: 523 --AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--------SITFNPDLY 572
F A Y+ ++ D+ A H+ G +EGR + + Y
Sbjct: 476 APDFDAQWYLDTYTDVARA-------QIPAVYHYITHGQQEGRFSSLARLVAQDLDIPWY 528
Query: 573 LTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLS 629
L +Y D+ + +H++ +G EGR + ++ S A
Sbjct: 529 LEAYPDV----ATSGMDPFEHFLLYGHAEGRQPSATPRMLEAPFFRYGPSEYGAKGR 581
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 75/218 (34%), Gaps = 46/218 (21%)
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA----------FKA 442
E + D YL +Y D+ HY+ +G EGR P F A
Sbjct: 426 EATHVEVDREWYLQTYPDVS----GSGVEPEEHYLNYGKAEGRYPTQNAFLQSEAPDFDA 481
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--------TFDSYLYLGSYDD 494
Y+ ++ D+ A H+ G +EGRF D YL +Y D
Sbjct: 482 QWYLDTYTDVARAQI-------PAVYHYITHGQQEGRFSSLARLVAQDLDIPWYLEAYPD 534
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA----FKALEYIASHEDLINAFADAPDLVQAG 550
+ H++ +G EGR P A +A + A P L+ A
Sbjct: 535 VATSG----MDPFEHFLLYGHAEGRQPSATPRMLEAPFFRYG-PSEYGAKGR-PLLIDAP 588
Query: 551 KDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRS 588
N G+ R+I + LY Y DL + F +
Sbjct: 589 VQ--LNEGF--ARTIGVHLHLY---YVDLADEFIKHLN 619
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 31/133 (23%)
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR-----------SITFNPDLYL 573
Y+ ++ D+ + ++H+ N+G EGR + F+ YL
Sbjct: 433 DREWYLQTYPDVSGS-------GVEPEEHYLNYGKAEGRYPTQNAFLQSEAPDFDAQWYL 485
Query: 574 TSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS---------GMQFKSVMNLSEKSRD 624
+Y D+ + A HYITHG +EGR ++ ++ +++ D
Sbjct: 486 DTYTDVARA----QIPAVYHYITHGQQEGRFSSLARLVAQDLDIPWYLEAYPDVATSGMD 541
Query: 625 KADLSLSFDHKKV 637
+ L + H +
Sbjct: 542 PFEHFLLYGHAEG 554
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 33/137 (24%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGR-----------DITFDSYLYLGSYDDLR 412
Y +Y D+ E +H+ +G +EGR FD+ YL +Y D+
Sbjct: 437 YLQTYPDVSGS----GVEPEEHYLNYGKAEGRYPTQNAFLQSEAPDFDAQWYLDTYTDVA 492
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALE-------YIASHEDLINAFADAPDLVQV 465
+ A HYITHG +EGR + + Y+ ++ D+ + D
Sbjct: 493 RA----QIPAVYHYITHGQQEGRFSSLARLVAQDLDIPWYLEAYPDVATSGMDP------ 542
Query: 466 GKDHFSNFGCEEGRFVT 482
+HF +G EGR +
Sbjct: 543 -FEHFLLYGHAEGRQPS 558
>gi|121634380|ref|YP_974625.1| iron-regulated protein FrpC [Neisseria meningitidis FAM18]
gi|120866086|emb|CAM09824.1| iron-regulated protein FrpC [Neisseria meningitidis FAM18]
Length = 2029
Score = 88.7 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 63/456 (13%), Positives = 122/456 (26%), Gaps = 66/456 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + IG
Sbjct: 865 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYAIGR 924
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 925 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 984
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 985 VLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 1040
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 1041 IYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 1100
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 1101 SDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 1160
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 1161 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGD 1220
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D + + Y +G
Sbjct: 1221 DYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDALNGG 1271
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ L ++ LI + G D +
Sbjct: 1272 EGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 1307
Score = 84.5 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 66/455 (14%), Positives = 129/455 (28%), Gaps = 70/455 (15%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + T + +D + +G G G +N + G +
Sbjct: 1270 GGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 1329
Query: 136 HPGSYNGGYPVYGVDNDYEN-----DSFLTSVMSYFMPQDSMMDASFGYCATPM-VSDIV 189
+ + ++ DS +V SYF S V D+
Sbjct: 1330 FTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 1389
Query: 190 AVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
V+++ + + G++ Y+ +Y + GDDLL+ G N +
Sbjct: 1390 TVKEL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDAGNDSIYS 1443
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ G E N + + +++ G GND + G N+ +GND +G SG DT
Sbjct: 1444 GNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDT 1503
Query: 307 FFYYAPSYLYKIYRFE-------------------------------------NAIIVYD 329
+ + +Y ++ + V
Sbjct: 1504 YVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQS 1563
Query: 330 ANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQDVF 380
++ ++ + F + + V + L S L +G D
Sbjct: 1564 YFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYL 1623
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
G D +Y G+ +D N + Y +G +
Sbjct: 1624 YGADGDDLLNGDAGND-----SIYSGNGNDTLNGGEGNDAL----YGYNGNDVLNGAEGN 1674
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
L ++ LI + G D +
Sbjct: 1675 DHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEG 1709
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/432 (12%), Positives = 105/432 (24%), Gaps = 88/432 (20%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ D D G G + + G
Sbjct: 1451 DGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGF 1510
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-----------MMDASFGYCATP 183
YN Y D D ++++ + + S+
Sbjct: 1511 GQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGS 1570
Query: 184 MVSDIVAVQKIYG-----------APKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDD 229
I + G + + G++ Y+ +Y + GDD
Sbjct: 1571 GAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDD 1630
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LL+ G N + ++ G E N + + + + G+ GND + G N+
Sbjct: 1631 LLN----GDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGAEGNDHLNGEDGNDTL 1686
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE--------------------------- 322
+GND +G SG DT+ + +Y ++
Sbjct: 1687 IGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGN 1746
Query: 323 ----------NAIIVYDANEHKQDFLSDVERLRF------------------ADQCIDSV 354
+ V ++ ++ + F D
Sbjct: 1747 HLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLY 1806
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDD 410
+ + L + L G D+ G D + LY + +D
Sbjct: 1807 AYQSGNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGND 1866
Query: 411 LRNVFGSDRGAA 422
+ N +
Sbjct: 1867 VLNGGEGNDHLN 1878
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 61/483 (12%), Positives = 110/483 (22%), Gaps = 54/483 (11%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D+ + + D G G + +N + G H +G + G +
Sbjct: 1033 NGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGN 1092
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ S +Y + D + Y DI+ + + G +
Sbjct: 1093 DYLEGGSGSD-TYVFGKGFGQDTVYNYDYATGRKDII---------RFTDGITADMLTFT 1142
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
++ + + D G + I +
Sbjct: 1143 REGNHLLIKAKDGSGQVTVQSYFQNDGS-----GAYRIDEIHFDNGKVLDVATVKELVQQ 1197
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ G+D + + N G+D G+ G D + IY +
Sbjct: 1198 STDGSDRLYAYQSGNTLNGGLGDDYLYGADGDD--LLNGDAGNDSIYSGNGNDTL----- 1250
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE--FG 390
D + L + + L + LI G D E FG
Sbjct: 1251 ---DGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 1307
Query: 391 LSEGRDITFDSYLYLGS---------------------YDDLRNVFGSDRGAAARHYITH 429
G+D ++ G L + Y +
Sbjct: 1308 KGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQN 1367
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
D + + + G D YLY
Sbjct: 1368 DGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGSTLNGGLG--DDYLYG 1425
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
DDL N Y +G + AL ++ L + +
Sbjct: 1426 ADGDDLLN----GDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGED 1481
Query: 550 GKD 552
G D
Sbjct: 1482 GND 1484
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 58/484 (11%), Positives = 107/484 (22%), Gaps = 63/484 (13%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D+ + + D G G + +N + G H +G + G +
Sbjct: 1433 NGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGN 1492
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ S +Y + D + Y DI+ + + G +
Sbjct: 1493 DYLEGGSGSD-TYVFGKGFGQDTVYNYDYATGRKDII---------RFTDGITADMLTFT 1542
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
++ + + D G + I +
Sbjct: 1543 REGNHLLIKAKDGSGQVTVQSYFQNDGS-----GAYRIDEIHFDNGKVLDVATVKKLVQQ 1597
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ G+D + + + G+D G+ G D + IY +
Sbjct: 1598 STDGSDRLYAYQSGSTLNGGLGDDYLYGADGDD--LLNGDAGNDSIYSGNGNDTL--NGG 1653
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D L + + L + LI G D E +
Sbjct: 1654 EGNDALYGY------NGNDVLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 1707
Query: 393 EG--RDITFDSYLYLGS---------------------YDDLRNVFGSDRGAAARHYITH 429
EG +D ++ G L + Y +
Sbjct: 1708 EGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQN 1767
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
D + + + G D YLY
Sbjct: 1768 DGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLG--DDYLYG 1825
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
DDL N G + + L ++ L +
Sbjct: 1826 ADGDDLLN-------------GDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGE 1872
Query: 550 GKDH 553
G DH
Sbjct: 1873 GNDH 1876
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 47/262 (17%), Positives = 86/262 (32%), Gaps = 24/262 (9%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS-----HNALHEIGHAL 132
+ + + + I D G G T + + ++ +A
Sbjct: 1663 NGNDVLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYAT 1722
Query: 133 GLMHPGSYNGGYPVYGVDNDYEND---------SFLTSVMSYFMPQDSMMDASFGYCATP 183
G + G + E + S +V SYF S
Sbjct: 1723 GRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDN 1782
Query: 184 M-VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
V D+ V+K+ + + G++ Y+ +Y + GDDLL+ G
Sbjct: 1783 GKVLDVATVKKL--VQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDA 1836
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
N + ++ G E N + + + + G GND + G N+ +GND +
Sbjct: 1837 GNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLE 1896
Query: 300 GSSGLDTFFYYAPSYLYKIYRF 321
G SG DT+ + +Y +
Sbjct: 1897 GGSGSDTYVFGKGFGQDTVYNY 1918
>gi|300312190|ref|YP_003776282.1| hemolysin-type calcium binding protein [Herbaspirillum seropedicae
SmR1]
gi|300074975|gb|ADJ64374.1| hemolysin-type calcium binding protein [Herbaspirillum seropedicae
SmR1]
Length = 1139
Score = 88.7 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 66/283 (23%), Gaps = 56/283 (19%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ Q ++ GDD + + + + + G +
Sbjct: 486 GDDQLFGGLGNDQMWGGDGDDTMMGSDVSNTGRPLPAGQTDDDIMFGGAGKDGMFGGAGN 545
Query: 269 E---------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + G+ G+D + G + N+ + GNDV G G D +
Sbjct: 546 DQMWGGDGDDGLYGNEGDDKLYGEAGNDHIYGGKGNDVIQGGDGDDLIY----------- 594
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
++ + + +L A + L G DV
Sbjct: 595 -GDDMEYFWMQPD----------------------TTGGDDLLYGGAGNDSLFGGSGNDV 631
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI-----------T 428
+ G D +D G D A+ Y
Sbjct: 632 LDGGSGNDSLVGGLGDDTYVVDGAGDTIRED--ADQGHDTVVASCSYTLGRNLEDLRLAE 689
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
G G + + L + G D +
Sbjct: 690 GGQFNGTGNAQDNLITGNSQDNILDGGRGADTLMGGTGNDSYF 732
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 86/682 (12%), Positives = 168/682 (24%), Gaps = 122/682 (17%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
D T D D G G + ++ L
Sbjct: 437 VGTTGDDTLWGG--AGNDTLFGREGNDRLFGEDGDDQLLGGEGFDLLDGGAGDDQLFGGL 494
Query: 133 GLMHPGSYNGGYPVYGVDNDYEN-----DSFLTSVMSYFMPQDSMMDAS----------- 176
G +G + G D +M +D M +
Sbjct: 495 GNDQMWGGDGDDTMMGSDVSNTGRPLPAGQTDDDIMFGGAGKDGMFGGAGNDQMWGGDGD 554
Query: 177 ---FGYCATPMVSDIVAVQKIYGAPKGSL-----------GNNIYKIEVQQKDSPFIQTI 222
+G + IYG + G+++ +Q + +
Sbjct: 555 DGLYGNEGDDKLYGEAGNDHIYGGKGNDVIQGGDGDDLIYGDDMEYFWMQPDTTGGDDLL 614
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI-------------- 268
Y G+D L G + +D + + S +GG + +
Sbjct: 615 YGGAGNDSL---FGGSGNDVLDGGSGNDSLVGGLGDDTYVVDGAGDTIREDADQGHDTVV 671
Query: 269 ---------------------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G++ ++++ GNS +N+ G D G +G D++
Sbjct: 672 ASCSYTLGRNLEDLRLAEGGQFNGTGNAQDNLITGNSQDNILDGGRGADTLMGGTGNDSY 731
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID--SVNVKQRSILEYT 365
F K+ + + +++E L D + + ++
Sbjct: 732 FVD--DVNDKVVEQAGEGVDTVFSRISTTLGANLENLTLLDSATPQHEIVNGRDMLVYGY 789
Query: 366 ASYEDLIQVIGQDVFESMKHF----------------------YEFGLSEGRDITFDSYL 403
Y +L G D + ++ G +T
Sbjct: 790 PHYAELDYSQG-DAVAGYTGTCGETSVVNLCLMAGLAVTEAQAVKRAIANGWCVTSGESQ 848
Query: 404 YLGSY-DDLRNVFGSDRGAAARHYI------THGVKEGRNPDAFKALEYIASHEDLINAF 456
GS D + S A Y +KEGR + + +
Sbjct: 849 LGGSNQYDQVALLASYGIRAKAGYGYDEKALVKVLKEGRGALVSVNAGKLWDNPGAVQLG 908
Query: 457 ADAPDLVQVGKDHFSNFG-------CEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ G G + GR D+ YL + + +D A
Sbjct: 909 NGNHVITVTGVVCDPGTGEAQGFFIADSGRGRPEDACRYLSKDELRKVADVTDGYMVATV 968
Query: 510 YITHGVKEGRNPDAFKALEYIASH---EDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
E + + I + + + + AG D + + G
Sbjct: 969 DPIKVPNENLDATGNELDNVITGNRGANVIRGGRGNDTLIGGAGNDTYV---FARGDGQD 1025
Query: 567 FNPDLYLTS-YDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDK 625
D T D + SD + G + R + G ++ + +
Sbjct: 1026 VIADQDATRGNIDTLQL--SDLRQTNLWFSQSG-NDLRIDVLGGNDRITIKDWYQGGSSG 1082
Query: 626 ADLSL-SFDHKKVDLYTDYFGD 646
+D + + D D
Sbjct: 1083 SDNHIERIRTADGNTLYDSDVD 1104
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 67/271 (24%), Gaps = 42/271 (15%)
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
NS + ++G+D G +G DT F D
Sbjct: 429 DNSGKDTLVGTTGDDTLWGGAGNDTLF----------------------GREGND----- 461
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
RL D + + +L+ A + L +G D S+ +
Sbjct: 462 -RLFGEDGDDQLLGGEGFDLLDGGAGDDQLFGGLGNDQMWGGDGDDTMMGSDVSNTGRPL 520
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
D + G D + G + D L + L +
Sbjct: 521 PAGQTDDDIMFGGAGKDGM-----FGGAGNDQMWGGDGDDGLYGNEGDDKLYGEAGNDHI 575
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
G D G + + D Y D G D Y G
Sbjct: 576 YGGKGND--VIQGGDGDDLIYGDDMEYFWMQPD--TTGGDDLL-----YGGAGNDSLFGG 626
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L+ + ++ L+ D +V D
Sbjct: 627 SGNDVLDGGSGNDSLVGGLGDDTYVVDGAGD 657
>gi|300312186|ref|YP_003776278.1| calcium binding secreted hemolysin protein [Herbaspirillum
seropedicae SmR1]
gi|300074971|gb|ADJ64370.1| calcium binding secreted hemolysin protein [Herbaspirillum
seropedicae SmR1]
Length = 1080
Score = 88.7 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 42/136 (30%), Gaps = 3/136 (2%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + T +S+ G G D + G N+V G D G G DT+ S
Sbjct: 539 GTAGDDQLLGSTGEDSLHGGDGKDWLFGFDGNDVLDGGLGADTLYGGDGDDTYIVN--SS 596
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQ 373
++ N ++VE LR ++ +++ L
Sbjct: 597 DDRVVETINGGHDTVIASCSTILAANVEDLRLVEGGNLNGAGNTLDNLIVGNGQDNILDG 656
Query: 374 VIGQDVFESMKHFYEF 389
+G D +
Sbjct: 657 GVGADTMIGGLGNDSY 672
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 69/574 (12%), Positives = 146/574 (25%), Gaps = 84/574 (14%)
Query: 141 NGGYPVYGVDNDYENDSF------LTSVMSYFMPQDSMMDASFGYCATP--MVSDIVAVQ 192
G P DY + + S F ATP + +
Sbjct: 488 AAGLPNTLRATDYSIYTVGKGPRQEWNFKSLLATLSGQGAFFFVLPATPQAGTAGDDQLL 547
Query: 193 KIYGAPKGSLGNN-----IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
G G+ + T+Y GDD + ++
Sbjct: 548 GSTGEDSLHGGDGKDWLFGFDGNDVLDGGLGADTLYGGDGDDTYIV--NSSDDRVVETIN 605
Query: 248 ESWSSIGGYEKNMTIAQHT--------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
++ + +A + + G++ +++++GN +N+ G D
Sbjct: 606 GGHDTVIASCSTI-LAANVEDLRLVEGGNLNGAGNTLDNLIVGNGQDNILDGGVGADTMI 664
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV--K 357
G G D++F ++ + + + ++VE L D
Sbjct: 665 GGLGNDSYFVD--DAGDQVTEAADEGVDTVYSRISMRLAANVENLTLLDGGTPLRGTVEG 722
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL-----------------SEGRDITFD 400
+ +++ DL G + + E D
Sbjct: 723 KAALIYGAPKAYDLDYQQGN----GVTGYDGTCGETSVVNVLRMADQWVSEKEVVQRAID 778
Query: 401 SYLYLGSYDDLRNVFGS---DRGAAARHYI---THGVKEGRNPDAFKALEYIASHEDLIN 454
+ GS D+ Y + +K ++ A E + +
Sbjct: 779 KKWCITDAPSASAKGGSSALDQKRLLESYGLRAEYTLKYDQDKLAALVKEGRGVMVSVDS 838
Query: 455 AFADAPDLVQVGKDH-----FSNFGCEEGRFVTF-----------DSYLYLGSYDDLRNV 498
+ DH + E+G + F D+ Y+ + +
Sbjct: 839 RRLWSGGKGLNFTDHVVTVTGVAYAAEKGELIGFYIADSGRGLAEDATRYVSADELRAMA 898
Query: 499 FGSDRGAAARHYITHGVK---EGRNPDAFKALEYIASH---EDLINAFADAPDLVQAGKD 552
D A+ Y +K + + ++ + + A + + QAG D
Sbjct: 899 ---DVRGASMVYTLDPIKLRQQNLEATGNELDNHLVGNRGDNLITGAKGNDTLVGQAGND 955
Query: 553 HFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQF 612
+ FG +GR + + D D + ++ + G + + Q
Sbjct: 956 TYV-FGKGDGRDLVADHDA-TAGNIDTIKFSDARQTNLW--FRQVGQDLQIDVLGTTDQV 1011
Query: 613 KSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ D D
Sbjct: 1012 TVKDWYVGGDSGTDNRIERIKTADGKTLYDSDVD 1045
>gi|16332225|ref|NP_442953.1| leukotoxin; LtA [Synechocystis sp. PCC 6803]
gi|1653855|dbj|BAA18765.1| leukotoxin; LtA [Synechocystis sp. PCC 6803]
Length = 1290
Score = 88.7 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 74/276 (26%), Gaps = 41/276 (14%)
Query: 194 IYGAPKGSLG----NNIYK--IEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKN 241
+ GA G + IY + TIY G+D + +
Sbjct: 49 LSGANDTISGANGNDVIYGHHGDDFLSGEGDSDTIYGGFGNDAIRGGYHDWIPGGTPDGA 108
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
E I + I + + G GND + G ++ G D G
Sbjct: 109 DKLYGEEGDDMILAEGGDDQIWGGPGNDRLFGEHGNDQIWGEDGDDYIDVGPGLDSAWGG 168
Query: 302 SGLDTF---------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL--RFADQC 350
+G DT + I+ EN+ I+ D L + D
Sbjct: 169 NGNDTITSNWMAGRKYLSGEDGNDTIFGAENSDIIEGGP--GDDVLWGLRAYPSSVGDAI 226
Query: 351 IDSVNVKQRSILEYTASY---------------EDLIQVIGQDVFESMKHFYEFGLSEGR 395
++ + Y + + +G D + M EG
Sbjct: 227 DRIYGGPGNDLIYGDSFYFPNDGLWSSVLQYTQDIIWGGLGNDTIQGMAGNDTIYGGEGN 286
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHG 430
DI + Y GS+ G + H +G
Sbjct: 287 DIIYGGYDPSGSFIPPAEFHGDNFIDVGTGHNFAYG 322
Score = 82.1 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/316 (13%), Positives = 83/316 (26%), Gaps = 35/316 (11%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G+++ S TI + G+D++ G + +I G N
Sbjct: 36 SGDDLVHGRNFSSLSGANDTISGANGNDVI----YGHHGDDFLSGEGDSDTIYGGFGNDA 91
Query: 262 IAQHT----------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---- 307
I + + G G+D+++ ++ + GND G G D
Sbjct: 92 IRGGYHDWIPGGTPDGADKLYGEEGDDMILAEGGDDQIWGGPGNDRLFGEHGNDQIWGED 151
Query: 308 ---FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ L + + + +LS D + I+E
Sbjct: 152 GDDYIDVGPGLDSAWGGNGNDTITSNWMAGRKYLSG------EDGNDTIFGAENSDIIEG 205
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ L + G D+ + Y + +V +
Sbjct: 206 GPGDDVL-WGLRAYPSSVGDAIDRIYGGPGNDLIYGDSFYFPNDGLWSSVLQYTQDIIWG 264
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
++ A Y D+I D + + + G F
Sbjct: 265 GLGNDTIQ----GMAGNDTIYGGEGNDIIYGGYDPSGSFIPPAEFHGDNFIDVGTGHNF- 319
Query: 485 SYLYLGSYDDLRNVFG 500
Y G +D+ V G
Sbjct: 320 --AYGGPGNDVIKVSG 333
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 58/348 (16%), Positives = 100/348 (28%), Gaps = 27/348 (7%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S D I G + D AD G IL+ +I G
Sbjct: 75 SGEGDSDTIYGGFGNDAIRGGYHDWIPGGTPDGADKLYGEEGDDMILAEGGDDQIWGGPG 134
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+G ++G D D + + S + + S +S
Sbjct: 135 NDRLFGEHGNDQIWGEDGD-DYIDVGPGLDSAWGGNGNDTITSNWMAGRKYLSGEDGNDT 193
Query: 194 IYGAPKGSL-----GNNIYKI--EVQQKDSPFIQTIYDSGGDDLL--DLTLIGGVKNYID 244
I+GA + G+++ I IY G+DL+ D +
Sbjct: 194 IFGAENSDIIEGGPGDDVLWGLRAYPSSVGDAIDRIYGGPGNDLIYGDSFYFPNDGLWSS 253
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN-------------SANNVFFE 291
+ + I G N TI +++ G GND++ G +N
Sbjct: 254 VLQYTQDIIWGGLGNDTIQGMAGNDTIYGGEGNDIIYGGYDPSGSFIPPAEFHGDNFIDV 313
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+G++ G G D D D +E L +
Sbjct: 314 GTGHNFAYGGPGNDVIKVSGEISEQGFNILIGGDG--DDLIQGGDNSVPIEDLVVLPG-L 370
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + ++ + E ++ IG D + K F +G DI
Sbjct: 371 EEQVKELKEFIKTLENAEGVVPTIG-DFIDGGKGFNTIEAGDGTDIIL 417
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/317 (11%), Positives = 78/317 (24%), Gaps = 42/317 (13%)
Query: 237 GGVKNYIDLNTES---WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+ IDL + + + + G + + AN+ ++
Sbjct: 13 SESADNIDLRPSDRHKFDVVWAKSGDDLV------------HGRNFSSLSGANDTISGAN 60
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
GNDV G G D F IY + + D
Sbjct: 61 GNDVIYGHHGDD--FLSGEGDSDTIYGGFGNDAIRGGYHDWIPGGT-------PDGADKL 111
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ ++ + + G D + +G D Y+ L +
Sbjct: 112 YGEEGDDMILAEGGDDQIWGGPGNDRLFGEHGNDQIWGEDGDD-------YIDVGPGLDS 164
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+G + G ++ + + + A + D+I L +
Sbjct: 165 AWGGNGNDTITSNWMAG-RKYLSGEDGNDTIFGAENSDIIEGGPGDDVLWGLRAY----- 218
Query: 474 GCEEGRFVTFDSYLYLGSYDDLR--NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
+Y G +DL + F + + ++ +A
Sbjct: 219 ---PSSVGDAIDRIYGGPGNDLIYGDSFYFPNDGLWSSVLQYTQDIIWGGLGNDTIQGMA 275
Query: 532 SHEDLINAFADAPDLVQ 548
++ + +
Sbjct: 276 GNDTIYGGEGNDIIYGG 292
>gi|325137633|gb|EGC60210.1| Iron-regulated protein frpC [Neisseria meningitidis ES14902]
Length = 1829
Score = 88.7 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 63/456 (13%), Positives = 119/456 (26%), Gaps = 66/456 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 865 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 924
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 925 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 984
Query: 188 --IVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y +Y + GDDLL+ G N
Sbjct: 985 VLDVATVKELVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDAGNDS 1040
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + + + G GND + G N+ +GND +G SG
Sbjct: 1041 IYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 1100
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 1101 SDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 1160
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 1161 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGSTLNGGLGD 1220
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D N + Y +G
Sbjct: 1221 DYLYGADGDDLLNGDAGND-----SIYSGNGNDTLNGGEGNDAL----YGYNGNDVLNGG 1271
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ L ++ LI + G D +
Sbjct: 1272 EGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 1307
Score = 86.4 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 91/543 (16%), Positives = 166/543 (30%), Gaps = 84/543 (15%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS-----HNALHEIGHAL 132
+ + + + I D G G T + + ++ +A
Sbjct: 1263 NGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYAT 1322
Query: 133 GLMHPGSYNGGYPVYGVDNDYEND---------SFLTSVMSYFMPQDSMMDASFGYCATP 183
G + G + E + S +V SYF S
Sbjct: 1323 GRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDN 1382
Query: 184 M-VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
V D+ V+K+ + + G++ Y+ +Y + G+DLL+ G
Sbjct: 1383 GKVLDVATVKKL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLN----GDA 1436
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
N + ++ G E N + + + + G GND + G N+ +GND +
Sbjct: 1437 GNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLE 1496
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
GSSG DT+ + +Y ++ A D +RF D +
Sbjct: 1497 GSSGSDTYVFGEGFGQDTVYNYDYATGRKD-------------IIRFTDGITADML---- 1539
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGS 417
++ + G +F G R +I FD+ G D+ V
Sbjct: 1540 -TFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDN----GKVLDVATVKKL 1594
Query: 418 DRGAAARHYITHGVKEG--RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ + + + G N Y A +DL+N A + + + G
Sbjct: 1595 VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGE 1654
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
+ LY + +D+ N + L ++
Sbjct: 1655 G-------NDALYGYNGNDVLN----------------------GGEGNDHLNGEDGNDT 1685
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYI 595
LI + +G D + FG G+ +N ++ D + G AA H+I
Sbjct: 1686 LIGGAGNDYLEGGSGSDTYV-FGKGFGQDTVYN--YHVDKNSDTMHFKG--FKAADVHFI 1740
Query: 596 THG 598
G
Sbjct: 1741 RSG 1743
Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 75/271 (27%), Gaps = 29/271 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ D D G G + + G
Sbjct: 1452 GGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGSSGSDTYVFGEGFG 1511
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-----------MMDASFGYCATPM 184
YN Y D D ++++ + + S+
Sbjct: 1512 QDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSG 1571
Query: 185 VSDIVAVQKIYG-----------APKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDL 230
I + G + + G++ Y+ +Y + GDDL
Sbjct: 1572 AYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDL 1631
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L+ G N + ++ G E N + + + + G GND + G N+
Sbjct: 1632 LN----GDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLI 1687
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+GND +G SG DT+ + +Y +
Sbjct: 1688 GGAGNDYLEGGSGSDTYVFGKGFGQDTVYNY 1718
>gi|170731339|ref|YP_001776772.1| hemolysin-type calcium binding protein [Xylella fastidiosa M12]
gi|167966132|gb|ACA13142.1| hemolysin-type calcium binding protein [Xylella fastidiosa M12]
Length = 1480
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 70/572 (12%), Positives = 139/572 (24%), Gaps = 95/572 (16%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D + M AD G G T+ A+G+
Sbjct: 803 DGNDEIYGGALADILDGGAGNDMLSGGGGADTLDGGSGNDTLNGGTGNDTYRFAIGVGVD 862
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+ D D T++ + + ++ D + + + +
Sbjct: 863 RIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKYG-------TGDQLTISNYFYS 915
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG-- 255
+ + + V ++ + +G L N I + + GG
Sbjct: 916 AEYKVEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGSNRIYGLDGNDTIYGGAL 975
Query: 256 ------YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ T+ + +++ G +GND++ G + SGND +G +G DT+ +
Sbjct: 976 ADILDGGHSDDTLIGNAGDDTLFGGTGNDMLSGGKGADTLDGGSGNDTLNGGTGNDTYRF 1035
Query: 310 YAPSYLYKIYRFE---NAIIVYDANEHKQDFLSD-------------------------- 340
+ +I + V + L+
Sbjct: 1036 AIGVGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKYGTGDQLTVIEYFNP 1095
Query: 341 ------VERLRFAD-----------------------------QCIDSVNVKQRSILEYT 365
+E+ F+D + +
Sbjct: 1096 NYSGYKIEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGSNRIYGLDGNDEIYGG 1155
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A + L G D+ K G D+ + D R G+
Sbjct: 1156 ALNDMLYGGAGNDMLSGGKGADTLDGGSGNDVLYGGTG----NDMYRFAIGAGVDRIEES 1211
Query: 426 YITHGVKEGRNPDAFKALEYIA---SHEDLINAFADA-----PDLVQVGKDHFSNFGCEE 477
T G + + A DL+ + + + + F +
Sbjct: 1212 DTTAGNTDVVRFADVASTALTALERKDSDLVIKYGTSDQLTISNYFYSAEYKVEQFTFSD 1271
Query: 478 GRFVTFDSYLYLG-SYDDLRNVFGSDRGAAA-RHYITHGVKEGRNPDAFKALEYIASHED 535
G + + D N + + R Y G E L A ++
Sbjct: 1272 GVTWDEAAIKARVITNGDASNNYLRGYNDGSNRIYGLDGNDEIYGGALDDMLYGGAGNDM 1331
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
L +G D +G F
Sbjct: 1332 LSGGKGADTLDGGSGND--VLYGGTGNDMYRF 1361
Score = 84.1 bits (206), Expect = 6e-14, Method: Composition-based stats.
Identities = 60/429 (13%), Positives = 112/429 (26%), Gaps = 89/429 (20%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
N T + M AD G G T+ A+G+
Sbjct: 980 DGGHSDDTLIGNAGDDTLFGGTGNDMLSGGKGADTLDGGSGNDTLNGGTGNDTYRFAIGV 1039
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ D D T++ + + ++ D + V +
Sbjct: 1040 GVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKYG-------TGDQLTVIEY 1092
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ G I + + +D +T NY+ + + I
Sbjct: 1093 F--NPNYSGYKIEQFTFSDGVT------WDEAAIKARVITNGDASNNYLRGYNDGSNRIY 1144
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N I + + + G +GND++ G + SGNDV G +G D + + +
Sbjct: 1145 GLDGNDEIYGGALNDMLYGGAGNDMLSGGKGADTLDGGSGNDVLYGGTGNDMYRFAIGAG 1204
Query: 315 LYKIYRFE-------------------------NAIIVYDANEHKQDFLSD--------V 341
+ +I + ++ +V Q +S+ V
Sbjct: 1205 VDRIEESDTTAGNTDVVRFADVASTALTALERKDSDLVIKYGTSDQLTISNYFYSAEYKV 1264
Query: 342 ERLRFADQC--------------------------------------IDSVNVKQRSILE 363
E+ F+D + +L
Sbjct: 1265 EQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGSNRIYGLDGNDEIYGGALDDMLY 1324
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
A + L G D + G D+ +G+ D + + G A
Sbjct: 1325 GGAGNDMLSGGKGADTLDGGSGNDVLYGGTGNDMY---RFAIGAGVDRIEDYDTTTGNAD 1381
Query: 424 RHYITHGVK 432
I GV
Sbjct: 1382 VLSIGQGVS 1390
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 70/564 (12%), Positives = 139/564 (24%), Gaps = 97/564 (17%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
++ SD+ +S N + + I D G+G + +
Sbjct: 626 TLGSDLLVGTSGNDLIRGGGNGEGNDVLIGKGGNDELSGGLGDDILDGGTGNDVL----- 680
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G Y D S + T + +
Sbjct: 681 -----YGGTGNDTYRFAIGAGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVI 735
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTI------YDSGGDDLLDLTLIGGVKNYIDLNT 247
YG ++ D+ Q + +D ++ N I
Sbjct: 736 KYGTGDQLTISS--YFHPGFSDAKIEQFMFSDGVTWDEAAIKARVISNGDASNNTIIGYK 793
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + I G + N I + + + G +GND++ G + SGND +G +G DT+
Sbjct: 794 DGSNRIYGLDGNDEIYGGALADILDGGAGNDMLSGGGGADTLDGGSGNDTLNGGTGNDTY 853
Query: 308 FYYAPSYLYKIYRFEN-------------------------AIIVYDANEHKQDFLSD-- 340
+ + +I ++ +V Q +S+
Sbjct: 854 RFAIGVGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKYGTGDQLTISNYF 913
Query: 341 ------VERLRFADQCI--------------------DSVNVKQRSILEYTASYEDLIQV 374
VE+ F+D + + + +
Sbjct: 914 YSAEYKVEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGSNRIYGLDGNDTIYGG 973
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
D+ + + G D F D D L G+D T+
Sbjct: 974 ALADILDGGHSDDTLIGNAGDDTLFGGTGNDMLSGGKGADTLDGGSGNDTLNGGTGNDTY 1033
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G D + + + D++ A + + ++ + G Y
Sbjct: 1034 RFAIGVGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKYGTGDQLTVIEYF 1093
Query: 490 GSY------------------DDLRNVFGSDRGAAARHYI---THGVKEGRNPDAFKALE 528
+ G A+ +Y+ G D +
Sbjct: 1094 NPNYSGYKIEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGSNRIYGLDGNDEIY 1153
Query: 529 YIASHEDLINAFADAPDLVQAGKD 552
A ++ L + G D
Sbjct: 1154 GGALNDMLYGGAGNDMLSGGKGAD 1177
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 79/270 (29%), Gaps = 3/270 (1%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T+ + ++ N D+ G G + +
Sbjct: 1124 TNGDASNNYLRGYNDGSNRIYGLDGNDEIYGGALNDMLYGGAGNDMLSGGKGADTLDGGS 1183
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G +Y D S + T + +
Sbjct: 1184 GNDVLYGGT-GNDMYRFAIGAGVDRIEESDTTAGNTDVVRFADVASTALTALERKDSDLV 1242
Query: 193 KIYGAPKG-SLGNNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLTLIGGVKNYIDLNTESW 250
YG ++ N Y E + + F + +D +T NY+ +
Sbjct: 1243 IKYGTSDQLTISNYFYSAEYKVEQFTFSDGVTWDEAAIKARVITNGDASNNYLRGYNDGS 1302
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ I G + N I + + + G +GND++ G + SGNDV G +G D + +
Sbjct: 1303 NRIYGLDGNDEIYGGALDDMLYGGAGNDMLSGGKGADTLDGGSGNDVLYGGTGNDMYRFA 1362
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + +I ++ D Q +
Sbjct: 1363 IGAGVDRIEDYDTTTGNADVLSIGQGVSIN 1392
>gi|302382650|ref|YP_003818473.1| Hemolysin-type calcium-binding region [Brevundimonas subvibrioides
ATCC 15264]
gi|302193278|gb|ADL00850.1| Hemolysin-type calcium-binding region [Brevundimonas subvibrioides
ATCC 15264]
Length = 1009
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 64/487 (13%), Positives = 127/487 (26%), Gaps = 35/487 (7%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDIT-ELNPNAQEVARWALGEWSKVVDLTF 70
+LL + + + D + D+ E + L ++ ++
Sbjct: 427 NAGANLLVGGAGVDRMVGGQGDDFYEVTEAGDVVVEAAGEGTDTVYSYLETYTASANVER 486
Query: 71 EETSI---HSDIKFISSN---NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
E + + N T + I +D G +
Sbjct: 487 LELAGRARNGSTNADGGTVIGNALDNTLTVGGGSAVLIGGGGSDTAVIGGARAGFTIATN 546
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
G + GG +D + D
Sbjct: 547 SGITTVTGGGPDDHTGRGGADPVLGPGRGPDDRPDPGRNPGGGEVLNGADGYDS------ 600
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
G G Y + GDD +++ + +
Sbjct: 601 -------LYGNGGNDVLFG---YGGIDVLVGGDGADIMVGGDGDDTYEVSEVADNIQ--E 648
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSS-------GNDVVIGNSANNVFFESSGNDV 297
E + ++ Y T+A +T +VGS+ G++ ++GN +N+ +GND
Sbjct: 649 GAGEGFDTVFAYASGYTLAANTESLRLVGSATTGYGNAGDNTLVGNGLDNLLVGGAGNDT 708
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
F G +G DT Y + I + ++VE LR +++
Sbjct: 709 FYGGTGDDT--YEVTEAGDVVVEAAGEGIDTIFSYVTYTLGANVENLRLVGTAVNATGNA 766
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+++ LI G D+ + ++E D+ +++
Sbjct: 767 LNNMIVGNDGNNVLIGGAGNDIMVGSLGNDAYEVTEAGDVVYEAAGEGTDTVYSYIDTYQ 826
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS-NFGCE 476
Y+ + G + + L + G D F G
Sbjct: 827 MSLNVEALYLVGSGRVGLGSTGNDTIVGNGLNNILNGNAGNDILTGGAGVDQFWHLAGGG 886
Query: 477 EGRFVTF 483
R F
Sbjct: 887 HDRITDF 893
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 81/580 (13%), Positives = 143/580 (24%), Gaps = 43/580 (7%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA----------LGEWS 63
D +L ++ FI + D E+ V A L ++
Sbjct: 339 GDDVLSGGGGNDVFIGGSGNDTMIGGQGDDAYEVTEAGDVVTEQAGEGSDTVYSYLDSYT 398
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
++ E ++ + N G + + D G G
Sbjct: 399 LAANV--ETLALVGSARAGIGNAGNNTLIGNAGAN-LLVGGAGVDRMVGGQGDDFYEVTE 455
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A + A G Y+ N + + + +
Sbjct: 456 AGDVVVEAAGEGTDTVYSYLETYTASANVERLELAGRARNGSTNADGGTVIGNALDNTLT 515
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+ + G+ +G + I T+ G DD V
Sbjct: 516 VGGGSAVLIGGGGSDTAVIGGARAGF--TIATNSGITTVTGGGPDDHTGRGGADPVLGPG 573
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + +S+ G+ GNDV+ G +V G D+ G G
Sbjct: 574 RGPDDRPDPGRNPGGGEVLNGADGYDSLYGNGGNDVLFGYGGIDVLVGGDGADIMVGGDG 633
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT+ + + E V A ++ E LR + L
Sbjct: 634 DDTYEVSEVADNIQEGAGEGFDTV-FAYASGYTLAANTESLRLVGSATTGYGNAGDNTLV 692
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEF-----------GLSEGRDITFDSYLYLGSYDDLR 412
L+ G D F + EG D F Y +
Sbjct: 693 GNGLDNLLVGGAGNDTFYGGTGDDTYEVTEAGDVVVEAAGEGIDTIFSYVTYTLGANVEN 752
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
A + + + + D L A ++ ++ + + V D
Sbjct: 753 LRLVGTAVNATGNALNNMI---VGNDGNNVLIGGAGNDIMVGSLGNDAYEVTEAGDVVYE 809
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
E V Y Y+ +Y NV Y+ + G +
Sbjct: 810 AAGEGTDTV----YSYIDTYQMSLNV--------EALYLVGSGRVGLGSTGNDTIVGNGL 857
Query: 533 HEDLINAFADAPDLVQAGKDHFSN-FGYEEGRSITFNPDL 571
+ L + AG D F + G R F+
Sbjct: 858 NNILNGNAGNDILTGGAGVDQFWHLAGGGHDRITDFSTGS 897
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/319 (15%), Positives = 90/319 (28%), Gaps = 11/319 (3%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L T + + +T+ + + G+ +D G ++V GNDVF G SG
Sbjct: 299 LGTITLGDVIPTFAGLTVQGTAEGDVLSGTDRSDTFYGYGGDDVLSGGGGNDVFIGGSGN 358
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANE--------HKQDFLSDVERLRFADQCIDSVNV 356
DT Y++ + + ++VE L +
Sbjct: 359 DTMIGGQGDDAYEVTEAGDVVTEQAGEGSDTVYSYLDSYTLAANVETLALVGSARAGIGN 418
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ L A L+ G D + + ++E D+ ++
Sbjct: 419 AGNNTLIGNAGANLLVGGAGVDRMVGGQGDDFYEVTEAGDVVVEAAGEGTDTVYSYLETY 478
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ R + + G + A L A + G D G
Sbjct: 479 TASANVERLELAGRARNGSTNADGGTVIGNALDNTLTVGGGSAVLIGGGGSDTAVIGGAR 538
Query: 477 EGRFVTFD---SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
G + + + + G DD G+D GRNP + L +
Sbjct: 539 AGFTIATNSGITTVTGGGPDDHTGRGGADPVLGPGRGPDDRPDPGRNPGGGEVLNGADGY 598
Query: 534 EDLINAFADAPDLVQAGKD 552
+ L + G D
Sbjct: 599 DSLYGNGGNDVLFGYGGID 617
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 76/549 (13%), Positives = 131/549 (23%), Gaps = 67/549 (12%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ G + + +D+ G G +A +L ++
Sbjct: 203 TGGGGNDILAGGDGADVLVGGSGSDLLTGGAGADIFGYLSAQDSRAGSLDIIQDFQTGLD 262
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI------VAVQKIYGA 197
+ Q + T + D+ + VQ
Sbjct: 263 VIDLTDLQPTSVTLSQDGAYTLVSAQTPGGAFAVRVLGTITLGDVIPTFAGLTVQGTAEG 322
Query: 198 PKGSLGNNI-----YKIEVQQKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYIDL 245
S + Y + G+D + + +
Sbjct: 323 DVLSGTDRSDTFYGYGGDDVLSGGGGNDVFIGGSGNDTMIGGQGDDAYEVTEAGDVVTEQ 382
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESV-------VGSSGNDVVIGNSANNVFFESSGNDVF 298
E ++ Y + T+A + ++ +G++GN+ +IGN+ N+ +G D
Sbjct: 383 AGEGSDTVYSYLDSYTLAANVETLALVGSARAGIGNAGNNTLIGNAGANLLVGGAGVDRM 442
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS-DVERLRFADQCID----- 352
G G D FY + + + S +VERL A + +
Sbjct: 443 VGGQGDD--FYEVTEAGDVVVEAAGEGTDTVYSYLETYTASANVERLELAGRARNGSTNA 500
Query: 353 ----SVNVKQRSILEYTASYEDLIQVIGQDV-------------------FESMKHFYEF 389
+ + L LI G D + +
Sbjct: 501 DGGTVIGNALDNTLTVGGGSAVLIGGGGSDTAVIGGARAGFTIATNSGITTVTGGGPDDH 560
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G D G D R G + G G L
Sbjct: 561 TGRGGADPVLGP----GRGPDDRPDPGRNPGGGEVLNGADGYDSLYGNGGNDVLFGYGGI 616
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCE----EGRFVTFDSYLYLGSYDDLRNVFGSD--R 503
+ L+ + G D + EG FD+ S L S
Sbjct: 617 DVLVGGDGADIMVGGDGDDTYEVSEVADNIQEGAGEGFDTVFAYASGYTLAANTESLRLV 676
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G+A Y G L A ++ D V D EG
Sbjct: 677 GSATTGYGNAGDNTLVGNGLDNLLVGGAGNDTFYGGTGDDTYEVTEAGDVVVEA-AGEGI 735
Query: 564 SITFNPDLY 572
F+ Y
Sbjct: 736 DTIFSYVTY 744
Score = 44.0 bits (102), Expect = 0.072, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 37/123 (30%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N + I G N + + + G G+DV++G + +V F +G+D
Sbjct: 6 GTPGNDTTRGSAGDDDISGLGGNDILEGMGGNDFITGGDGDDVLLGGTGTDVLFGGAGDD 65
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ G +T + E + + + + +S
Sbjct: 66 LLWGGGYGNTGIATPDQVRDDLDGGEGNDSLLIGRNDVALGGNGDDEFEMEGEGAESWTA 125
Query: 357 KQR 359
Sbjct: 126 TMD 128
>gi|282899859|ref|ZP_06307820.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii
CS-505]
gi|281195129|gb|EFA70065.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii
CS-505]
Length = 9381
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 77/245 (31%), Gaps = 17/245 (6%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ L G ++I + + G N + V G G+D+++G ++
Sbjct: 8032 ITLEGTIGDDSFI--AADGNDKLEGSYGNDFFDAKGGDDIVNGGYGDDILLGGEGDDWIT 8089
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS---DVERLRFA 347
GND +G++G D S + E A I+ D + +++
Sbjct: 8090 GGHGNDNLEGNAGNDQI--DGGSGNDYLQGGEGADIL--NGGMGNDTIEGNGGNDQIDGG 8145
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL---SEGRDITFDSYLY 404
D + + L + LI G D+ + F SEG D D
Sbjct: 8146 DGNDILLGNEDNDWLTGQVGNDILIGGTGDDILNGGEGADVFYFSSKSEGFDTILDFNPE 8205
Query: 405 LGSYDDLR-NVFGSDRGAAARHYITHGVKEGRNP----DAFKALEYIASHEDLINAFADA 459
G + + F + R +G+N + + Y + D+I
Sbjct: 8206 QGDKIQVSKSGFAVNNLDGFRFISGVLDFQGQNLALIQNDGRTYSYFPNLSDIIQLVETP 8265
Query: 460 PDLVQ 464
V
Sbjct: 8266 TVTVS 8270
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 71/227 (31%), Gaps = 7/227 (3%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
L I + + I K +T+ +S + + GND + G+ N+ F
Sbjct: 8004 YLIDPTSPVALIRIQDNETAIIDQVIKGITLEGTIGDDSFIAADGNDKLEGSYGNDFFDA 8063
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G+D+ +G G D + N + +A + D S + L+ +
Sbjct: 8064 KGGDDIVNGGYGDDIL-LGGEGDDWITGGHGNDNLEGNAGNDQIDGGSGNDYLQGGEGAD 8122
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+E + + G D+ + G DI G+ DD+
Sbjct: 8123 ILNGGMGNDTIEGNGGNDQIDGGDGNDILLGNEDNDWLTGQVGNDIL-----IGGTGDDI 8177
Query: 412 RN-VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
N G+D + NP+ ++ S + N
Sbjct: 8178 LNGGEGADVFYFSSKSEGFDTILDFNPEQGDKIQVSKSGFAVNNLDG 8224
>gi|159027694|emb|CAO89559.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 1463
Score = 88.3 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 63/466 (13%), Positives = 114/466 (24%), Gaps = 35/466 (7%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND--YENDSFLT 160
+ D G I + + G NG + G D + + ND+
Sbjct: 168 GTNGNDNITGTSGDDNISGLDGNDTLSGLGGNDSIYGGNGNDSLNGGDGNDYFTNDAGND 227
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ 220
++ +D S M + G+ ++G + F
Sbjct: 228 TINGGSGDDRYQVDYSSASSGLTMTYNTTT-----GSGTITVGTETDTFTSIESFEGFKG 282
Query: 221 T----IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
T + G L GG N I G + N + +++ G SG
Sbjct: 283 TEYNDVIFGGTASEYWGALSGGSGNDTISGNAGNDRIYGEDGNDVLNGGADTDALYGGSG 342
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK-- 334
ND++ G++ ++ F GND +G SG+D + + N
Sbjct: 343 NDLLNGDAGDDYFTNEDGNDTINGGSGIDRYEADYSYASSGLTMTYNTATGSGTITVGTE 402
Query: 335 QDFLSDVERLRFADQC------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D + +E + + A + + G DV
Sbjct: 403 TDTFTSIENFNGFKGTEYNDVIFGGTAVEELKGGGGNDTISGNAGDDYIYGEDGNDVLNG 462
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G D+ D N + GA + +Y D
Sbjct: 463 GVGNDNIYGGNGNDLLNGDSGDDNFTGDEGNNDTINGGAGSDNYAA---------DYSYG 513
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ D + +F +G D + +
Sbjct: 514 SSGLTMTYDTAGSGTITVGTETDTFTSIESFNGFKGTD-YNDVIFGGTAVGYGYYEYLYG 572
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
R G + L A ++ L +
Sbjct: 573 REGNDTISGNAGGDIIYGENGNDVLNGGADNDQLYGGNGNDTLQGT 618
Score = 84.5 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/342 (14%), Positives = 86/342 (25%), Gaps = 25/342 (7%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G N T +I G + N T++ +S+ G +GND + G N+ F +GN
Sbjct: 167 TGTNGNDNITGTSGDDNISGLDGNDTLSGLGGNDSIYGGNGNDSLNGGDGNDYFTNDAGN 226
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK--QDFLSDVERLRFADQC--- 350
D +G SG D + S + N D + +E
Sbjct: 227 DTINGGSGDDRYQVDYSSASSGLTMTYNTTTGSGTITVGTETDTFTSIESFEGFKGTEYN 286
Query: 351 ------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ A + + G DV G D+
Sbjct: 287 DVIFGGTASEYWGALSGGSGNDTISGNAGNDRIYGEDGNDVLNGGADTDALYGGSGNDLL 346
Query: 399 FDSYLYLG-----SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
D + G DR A Y + G+ N + + D
Sbjct: 347 NGDAGDDYFTNEDGNDTINGGSGIDRYEADYSYASSGLTMTYNTATGSGTITVGTETDTF 406
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
+ + + G + ++G D
Sbjct: 407 TSIENFNGFKGTEYNDVIFGGTAVEELKGGGGNDTISGNAGDDYIYGEDGNDVLN--GGV 464
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFA-DAPDLVQAGKDHF 554
G + L + ++ + AG D++
Sbjct: 465 GNDNIYGGNGNDLLNGDSGDDNFTGDEGNNDTINGGAGSDNY 506
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 3/131 (2%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN+IY +GG D LD T ++L + + +T
Sbjct: 1236 GNDIYCFNASTPLGSDTIQETTTGGIDTLDFTG-TNTAVRVNLGITTNQTAVTNNLRLTF 1294
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + IE+++G SGND + GNS NN GND G G D+ S +
Sbjct: 1295 SANNTIENIIGDSGNDRLTGNSLNNTLTGGGGNDQLTGQDGNDSLI--GGSGDDLLTGGN 1352
Query: 323 NAIIVYDANEH 333
+ + +
Sbjct: 1353 GSDNFIFNSSN 1363
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 35/251 (13%), Positives = 71/251 (28%), Gaps = 17/251 (6%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------------DGSSGLDTFFY 309
+ + G++G++ + GNS NN+ ++GND++ + G+DT +
Sbjct: 1207 GSNNINGTGNAGDNKITGNSGNNILAGANGNDIYCFNASTPLGSDTIQETTTGGIDTLDF 1266
Query: 310 YAPSYLYKIY--RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ ++ N V + + +E + + L
Sbjct: 1267 TGTNTAVRVNLGITTNQTAVTNNLRLTFSANNTIENIIGDSGNDRLTGNSLNNTLTGGGG 1326
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ L G D G D + LG GSD+ ++
Sbjct: 1327 NDQLTGQDGNDSLIGGSGDDLLTGGNGSDNFIFNSSNLGIDAISDFTPGSDKIVLSKAIF 1386
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
T N + A +DL+ + + N + +
Sbjct: 1387 TALQSIIGNGFSQAAEFASVDDDDLVATSSAFIVYSNSSGSIYYNQNGSAAGLGSGSEFA 1446
Query: 488 YLGSYDDLRNV 498
L + L
Sbjct: 1447 NLLTVPTLIAA 1457
Score = 41.7 bits (96), Expect = 0.36, Method: Composition-based stats.
Identities = 26/254 (10%), Positives = 51/254 (20%), Gaps = 12/254 (4%)
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ LD A + + + + + + +
Sbjct: 132 GNSLDVATLDALRAENDQATIIINGEIIQVEQADFTGTNGNDNITGTSGDDNISGLDGND 191
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
L + + G D F G D D +
Sbjct: 192 TLSGLGGNDSIYGGNGNDSLNGGDGNDYFTNDAGNDTINGGSGDDRYQVDYSSASSGLTM 251
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ + G D F + I S E + +++ G
Sbjct: 252 TYNTTTGSGTITVGTETDTFTS---IESFEGFKGTEYNDVIFGGTASEYWGALSGGSGND 308
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
+ Y + N + Y G L A + N
Sbjct: 309 TISGNAGNDRIYGEDGNDVLNGGADTDALYGGSG---------NDLLNGDAGDDYFTNED 359
Query: 541 ADAPDLVQAGKDHF 554
+ +G D +
Sbjct: 360 GNDTINGGSGIDRY 373
>gi|227357924|ref|ZP_03842270.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
gi|227161897|gb|EEI46921.1| possible metalloprotease [Proteus mirabilis ATCC 29906]
Length = 394
Score = 87.9 bits (216), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/244 (18%), Positives = 69/244 (28%), Gaps = 79/244 (32%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNN--------------GYVCTPRY 94
P+ QEV L S DLTF I + G+ P Y
Sbjct: 155 PHQQEVVTEILQLASDFADLTFTRVPIQKNANLKFGYYKQFATGYYMTRETVGFASKPNY 214
Query: 95 DS------------------------------------RYFMEINFDKADVWRYGIGK-- 116
+ ++E + D++ Y
Sbjct: 215 NGTPIKEIGQNESYDFSGSIFINLASHDFYQWVKRDNLDKYIENEANIGDLYNYHDNNQV 274
Query: 117 --------------------GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
G+ + + LHE+GHALGL H +Y + +
Sbjct: 275 AIIKSTDVLLNETMKSKHKLGSQIYYVFLHELGHALGLEHIDAY------LKNIKNSAIE 328
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKD 215
++ +VM D Y T M+ DI+ +Q +YG L NN Y
Sbjct: 329 TYKYTVMGMGFADIKDADFGGLYPMTFMLVDILLLQYLYGPNMTTRLENNTYGFNSNTGR 388
Query: 216 SPFI 219
+ +
Sbjct: 389 AAYS 392
>gi|255068245|ref|ZP_05320100.1| putative outer membrane secretion protein [Neisseria sicca ATCC
29256]
gi|255047515|gb|EET42979.1| putative outer membrane secretion protein [Neisseria sicca ATCC
29256]
Length = 427
Score = 87.9 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 76/279 (27%), Gaps = 10/279 (3%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Q YG + GN I+ + +T+ G D D G + I +
Sbjct: 116 QNTYGHDDKNPGNIIHVDGSTKDKDGLTKTV----GTDKKDTIYGTGGDDVIYGGDGA-D 170
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G + N T+ +S+ G G D + G N+ + D+ G G D +F
Sbjct: 171 VIYGGDGNDTLQGDNNGDSLYGQGGKDYLQGGDGNDYLNGGADADIMRGGDGNDVYFVDH 230
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYED 370
Y N I + +VE L I+ + + +
Sbjct: 231 KGDQVIEYGNANGGIDTVRSVIDYTLTDNVEHLFLQGSGNINGTGNALNNDINGNSGNNH 290
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L + G D G D+ D G R
Sbjct: 291 LYGLAGDDCLVGKDGNDYLDGGIGNDVLIGGTGD----DTYFFDKGYGRDTIQDESGNDT 346
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
++ G+ A L + ++ +
Sbjct: 347 LQFGKGISASDVLLSKTGNSLTVSVGGGDTVTIDDWFSG 385
Score = 44.0 bits (102), Expect = 0.087, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 65/263 (24%), Gaps = 5/263 (1%)
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV---DNDYENDSF 158
+ DK D G I + I G N G +YG D D
Sbjct: 146 VGTDKKDTIYGTGGDDVIYGGDGADVIYGGDGNDTLQGDNNGDSLYGQGGKDYLQGGDGN 205
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
D + Y ++ G Y + +
Sbjct: 206 DYLNGGADADIMRGGDGNDVYFVDHKGDQVIEYGNANGGIDTVRSVIDYTLTDNVEHLFL 265
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ +G + L+ + G N + G + N + + ++G +G+D
Sbjct: 266 QGSGNINGTGNALNNDINGNSGNNHLYGLAGDDCLVGKDGNDYLDGGIGNDVLIGGTGDD 325
Query: 279 V--VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+ + SGND G+ + ++
Sbjct: 326 TYFFDKGYGRDTIQDESGNDTLQFGKGISASDVLLSKTGNSLTVSVGGGDTVTIDDWFSG 385
Query: 337 FLSDVERLRFADQCIDSVNVKQR 359
+E +FAD V
Sbjct: 386 NNHKIENFKFADGSTYEVTGHGD 408
>gi|325138393|gb|EGC60961.1| Iron-regulated protein frpC [Neisseria meningitidis ES14902]
Length = 1095
Score = 87.9 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 82/535 (15%), Positives = 146/535 (27%), Gaps = 63/535 (11%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 531 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 590
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 591 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 650
Query: 188 --IVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y +Y + GDDLL+ G N
Sbjct: 651 VLDVATVKELVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDAGNDS 706
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + + + G GND + G N+ +GND +G SG
Sbjct: 707 IYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 766
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT+ + +Y ++ A D +RF D +
Sbjct: 767 SDTYVFGKGFGQDTVYNYDYATGRKD-------------IIRFTDGITADML-----TFT 808
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
++ + G +F G +Y + D V
Sbjct: 809 REGNHLLIKAKDGSGQVTVQSYFQNDGSG--------AYRIDEIHFDNGKVLDVATVKKL 860
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
T G + L + L A D G D
Sbjct: 861 VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLNGDAGND--------------- 905
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
+Y G+ +D + + Y +G + L ++ LI +
Sbjct: 906 --SIYSGNGNDTLDGGEGNDAL----YGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGND 959
Query: 544 PDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+G D + FG G+ +N ++ D + G AA H+I G
Sbjct: 960 YLEGGSGSDTYV-FGKGFGQDTVYN--YHVDKNSDTMHFKG--FKAADVHFIRSG 1009
>gi|15677274|ref|NP_274427.1| iron-regulated protein FrpC [Neisseria meningitidis MC58]
gi|12230091|sp|Q9JYV5|FRPC_NEIMB RecName: Full=Iron-regulated protein frpC
gi|7226653|gb|AAF41776.1| iron-regulated protein FrpC [Neisseria meningitidis MC58]
Length = 1829
Score = 87.9 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 62/456 (13%), Positives = 121/456 (26%), Gaps = 66/456 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 865 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGR 924
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 925 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 984
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 985 VLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 1040
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 1041 IYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 1100
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 1101 SDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 1160
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 1161 VQYYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGD 1220
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D + + Y +G
Sbjct: 1221 DYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDALNGG 1271
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ L ++ LI + G D +
Sbjct: 1272 EGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 1307
Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats.
Identities = 68/511 (13%), Positives = 126/511 (24%), Gaps = 89/511 (17%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ D D G G + + G
Sbjct: 1251 DGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGF 1310
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-----------MMDASFGYCATP 183
YN Y D D ++++ + + S+
Sbjct: 1311 GQDAVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGS 1370
Query: 184 MVSDIVAVQKIYGA------------PKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDD 229
I + G + +Y + +Y + GDD
Sbjct: 1371 GAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDD 1430
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LL+ G N + ++ G E N + + +++ G GND + G N+
Sbjct: 1431 LLN----GDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTL 1486
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE--------------------------- 322
+GND +G SG DT+ + +Y ++
Sbjct: 1487 IGGAGNDYLEGGSGSDTYVFGKGFGQDAVYNYDYATGRKDIIRFTDGITADMLTFTREGN 1546
Query: 323 ----------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILE 363
+ V ++ ++ + F + + V + L
Sbjct: 1547 HLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLY 1606
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
S L +G D G D +Y G+ +D + +
Sbjct: 1607 AYQSGSTLNGGLGDDYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL-- 1659
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
Y +G + L ++ LI + G D + EG
Sbjct: 1660 --YGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG---EGFGQDT 1714
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
++ D AA H+I G
Sbjct: 1715 VYNYHVDKNSDTM--HFKGFKAADVHFIRSG 1743
>gi|298291987|ref|YP_003693926.1| Hemolysin-type calcium-binding region [Starkeya novella DSM 506]
gi|296928498|gb|ADH89307.1| Hemolysin-type calcium-binding region [Starkeya novella DSM 506]
Length = 984
Score = 87.9 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 75/479 (15%), Positives = 125/479 (26%), Gaps = 30/479 (6%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
G + D D G G + + G
Sbjct: 325 TLRGGGGNDWLNASLGNDLLYGGDGDDDLNAGDGNDQLHGEAGNDVLLGGSGNDIMSGGA 384
Query: 142 GGYPVYGVD-NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD----IVAVQKIYG 196
G G D Y +D + D I A+
Sbjct: 385 GDDRFDGGTGADQLEGGDGFDTADYSAGGAVGIDLLANVASGAAAGDTFSSIEALIGSV- 443
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A G+N + I GG D D + I LN+ +
Sbjct: 444 ADDILAGDNA---NNSFQGGGGADLIVGQGGFDTSDYS-TSAAGVTIQLNSSAADPQAAG 499
Query: 257 EKNMTIAQH---TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
A+ IE ++GS+ D ++G + F +G DV +G+ G+DT Y S
Sbjct: 500 TGTGGDAEGDSLISIERIIGSAFVDTLLGGELADTFVGGAGADVLNGNGGVDTAEYSTSS 559
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ A + + + D ++++E L + + L+ A + L
Sbjct: 560 TAVNVTIDPAATTIGTGGDAEGDQITNIENLIGSAFNDVLRAGTGVNRLDGGAGNDMLAG 619
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D Y GS + G A + G +
Sbjct: 620 GEGADTLIGGDGVDTI-------------DYSGSNAAVGLGLTDVPGQATQGSG--GHAQ 664
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
G + + A ++ L + G D G + + SY
Sbjct: 665 GDIIAQIENVIGSAFNDTLQGSAGANRLEGGGGNDTLRGQGGADVLIGGLGTD--TASYS 722
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ A A + G +G + L A + L + D G D
Sbjct: 723 SSASGVTVAISATATTVGSGGDAQGDQLSGIENLTGSAFADVLTGSDGDNRLDGGGGND 781
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/309 (14%), Positives = 84/309 (27%), Gaps = 11/309 (3%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++ + + + G+ ++ ++G N+ ++GND+ G + D
Sbjct: 174 GAGGDATGDTLLGIENLTGSGKNDILSGNGLDNQLVGMLGNDTLRGNNGNDLLIGDTITD 233
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
P + D S +RL + + L
Sbjct: 234 VDGNGIPDDDDGDGIPDGVNDAVAGGADTLDGGSGDDRLFGGGGADNLIGGFGHDQLYGG 293
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ L G D+ + + + S G D G D L G+D
Sbjct: 294 QGDDLLTSGDGNDLLDGGEGNDQLIASIGDDTL----RGGGGNDWLNASLGNDLL----- 344
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TF 483
Y G + D L A ++ L+ + G D F + F
Sbjct: 345 YGGDGDDDLNAGDGNDQLHGEAGNDVLLGGSGNDIMSGGAGDDRFDGGTGADQLEGGDGF 404
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
D+ Y ++ + AA ++ A L ++
Sbjct: 405 DTADYSAGGAVGIDLLANVASGAAAGDTFSSIEALIGSVADDILAGDNANNSFQGGGGAD 464
Query: 544 PDLVQAGKD 552
+ Q G D
Sbjct: 465 LIVGQGGFD 473
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 57/349 (16%), Positives = 101/349 (28%), Gaps = 22/349 (6%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
P Q I + G+D++++T G + ++ S G + +++ +
Sbjct: 52 PTYQLISRTNGNDVVEVTSSGRFEVRGLAGNDTISVRAGTTGGDLLVGGDGNDTLTAAES 111
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGL---------DTFFYYAPSYLYKIYRFENA--I 325
+DV+ G + + +GNDV G +G DT Y + S I +
Sbjct: 112 DDVLDGGAGTDRLNGGAGNDVLIGGAGGDTLTGGDGVDTAVYSSSSAAVIISLNLDPQKS 171
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ D L +E L + + + L + L G D+
Sbjct: 172 TRGAGGDATGDTLLGIENLTGSGKNDILSGNGLDNQLVGMLGNDTLRGNNGNDLLIGDTI 231
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
G D D + D G+ G + Y
Sbjct: 232 TDVDGNGIPDDDDGDGIPDGVNDAVAGGADTLDGGSGDDRLFGGGGADNLIGGFGHDQLY 291
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+DL+ + L + + D+ G D L G+D
Sbjct: 292 GGQGDDLLTSGDGNDLLDGGEGNDQLIA------SIGDDTLRGGGGNDWLNASLGNDLL- 344
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
Y G + D L A ++ L+ + AG D F
Sbjct: 345 ----YGGDGDDDLNAGDGNDQLHGEAGNDVLLGGSGNDIMSGGAGDDRF 389
Score = 39.4 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 77/297 (25%), Gaps = 22/297 (7%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ + S + + A+ G G T+ +
Sbjct: 654 QATQGSGGHAQGDIIAQIENVIGSAFNDTLQGSAGANRLEGGGGNDTLRGQGGADVLIGG 713
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
LG Y + + + D+ D G + +
Sbjct: 714 LGTD--------TASYSSSASGVTVAISATATTVGSGGDAQGDQLSGIENLTGSAFADVL 765
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
G + G + + T+ G D +D + + L+ S
Sbjct: 766 TGSDGDNRLDGG----GGNDRLVGGLGVDTLVGGDGVDTVDYS-ASNAGVVVQLSANPAS 820
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + IES++GS+ D + G++A N +G D +
Sbjct: 821 ATVGSGGHAAGDILNTIESIIGSNFTDTLFGSTAGNKLVSG---------AGNDVMRGGS 871
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ L + + D +DV ++ I + +L +
Sbjct: 872 GADLLVANGSGSKTLYGDGIADGGTAGADVFQIMGGTNVIADYQSGEDILLNSLSGA 928
>gi|163795539|ref|ZP_02189505.1| RTX toxins and related Ca2+-binding protein [alpha proteobacterium
BAL199]
gi|159179138|gb|EDP63671.1| RTX toxins and related Ca2+-binding protein [alpha proteobacterium
BAL199]
Length = 1188
Score = 87.9 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 56/369 (15%), Positives = 94/369 (25%), Gaps = 25/369 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ G +LLD TLIG + + G N +
Sbjct: 751 GNDVLSGGDGNDVLVGVAGSNLLDGGEGVDTLIGADGDDTLYGGNGNDVLYGVTGNDVLY 810
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLY 316
+++ G +G+D + G + ++ +GNDV G G D +
Sbjct: 811 GGDGADNISGMAGDDTLYGGTGADILSGGAGNDVLSGGDGNDVLVGVAGNNLLDGGEGVD 870
Query: 317 KIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + +Y N + + ++ + L D + + L + L
Sbjct: 871 TLIGADGDDTLYGGNGNDVLYGVTGNDVLYGGDGADNISGMAGDDTLYGGTGADILSGGA 930
Query: 376 GQDVFESMKHFYEFGLSEGRD-----ITFDSYLYLGSYDDLRNVFGSDRGAAARH----Y 426
G DV G + D+ + D L G+D Y
Sbjct: 931 GNDVLSGGDGNDILVGVAGNNWLDGGEGIDTLVGADGDDTLFGGGGNDVLYGVTGNDVMY 990
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
G L + L + G D +
Sbjct: 991 GGDGADNLLGMAGDDTLYGGTGADILSGGGGNDVLSGGDGNDVLVGVAGDNWLDGGEGVD 1050
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
+GS D G Y G D L + ++ L L
Sbjct: 1051 TLVGSDGDDTLFGGGGNDVL---YGVTGNDVLYGGDGADLLSGMDGNDTLAGGTGADLLL 1107
Query: 547 VQAGKDHFS 555
AG D F
Sbjct: 1108 GGAGNDVFL 1116
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 65/504 (12%), Positives = 123/504 (24%), Gaps = 25/504 (4%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI--G 129
+ D + D G G + + G
Sbjct: 536 DVLYGGDGDDQLFGSTGNDVLSGGFGQDTLSGGAGNDALYGGNGLNVLYGGAGNDSLYAG 595
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
++ G + + G + S ++ A+ + SD +
Sbjct: 596 TMSDQLYGGDGADRFILSGQFVFGASHVIGDYAASQDTISLQGATSATILTASSLGSDAL 655
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ G L I + + D G + ++G + T
Sbjct: 656 LGIDLNGDTSADLYLRIVNGADLTFSTTVTGSGVDLVGSTMASSLIVGTSVADLLFGTSG 715
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDG 300
I + + T+ + V G +GND++ G + N+V GNDV DG
Sbjct: 716 PDIISALDGDDTVVALGGDDLVFGGAGNDLLSGGAGNDVLSGGDGNDVLVGVAGSNLLDG 775
Query: 301 SSGLDTFF-------YYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCID 352
G+DT Y + +Y ++Y ++ + L
Sbjct: 776 GEGVDTLIGADGDDTLYGGNGNDVLYGVTGNDVLYGGDGADNISGMAGDDTLYGGTGADI 835
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
+L + L+ V G ++ + + ++G D + Y
Sbjct: 836 LSGGAGNDVLSGGDGNDVLVGVAGNNLLDGGEGVDTLIGADGDDTLYGGNGNDVLYGVTG 895
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA------PDLVQVG 466
N A G L A ++ L + + G
Sbjct: 896 NDVLYGGDGADNISGMAGDDTLYGGTGADILSGGAGNDVLSGGDGNDILVGVAGNNWLDG 955
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
+ +G F Y N A G
Sbjct: 956 GEGIDTLVGADGDDTLFGGGGNDVLYGVTGNDVMYGGDGADNLLGMAGDDTLYGGTGADI 1015
Query: 527 LEYIASHEDLINAFADAPDLVQAG 550
L ++ L + + AG
Sbjct: 1016 LSGGGGNDVLSGGDGNDVLVGVAG 1039
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/326 (13%), Positives = 81/326 (24%), Gaps = 15/326 (4%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
D Y IG I+ A I G +G
Sbjct: 282 GSVASLSPTDWTNVTSFTVSYTGTAAYRIGLDNIVFTPASTAIVGTTGNDLLLGTSGNDT 341
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
+ +D + + + Y + ++ G + + Y GS +
Sbjct: 342 ISSLDGNDTVSALAGDDLVYGGSGNDLLSGGAGSDSLFGEDGNDTLFGGYFGSTGSNVLD 401
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
T++ GDD L L + + G + N I
Sbjct: 402 GGDGNDYLFGGDGANTLFGGAGDDTL-------------LGGSVGNVLYGGDGNDNIYAA 448
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + + G +GND + G N+ + GND G G DT + +
Sbjct: 449 SGNDVLYGGAGNDTLTGGDGNDNLYGDEGNDTLYGGGGDDTLVGGFSGTGDDLLSGGDGN 508
Query: 326 IVYDANEHKQDF--LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + + + L L + + L GQD
Sbjct: 509 DLLIGGNGQNTLYGGAGNDTLIAGSLSDVLYGGDGDDQLFGSTGNDVLSGGFGQDTLSGG 568
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYD 409
G ++ + Y
Sbjct: 569 AGNDALYGGNGLNVLYGGAGNDSLYA 594
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/317 (14%), Positives = 87/317 (27%), Gaps = 20/317 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D + + D AD G T+ + G
Sbjct: 874 GADGDDTLYGGNGNDVLYGVTGNDVLYGGDGADNISGMAGDDTLYGGTGADILSGGAGND 933
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+G + GV + D D + G + + +Y
Sbjct: 934 VLSGGDGNDILVGVAGNNWLDGGEGIDTLVGADGDDTLFGGGGNDV---LYGVTGNDVMY 990
Query: 196 GAPKGSL------GNNIYKIE--VQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNY 242
G + +Y + G+D+L D L GG
Sbjct: 991 GGDGADNLLGMAGDDTLYGGTGADILSGGGGNDVLSGGDGNDVLVGVAGDNWLDGGEGVD 1050
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ ++ ++ G N + T + + G G D++ G N+ +G D+ G +
Sbjct: 1051 TLVGSDGDDTLFGGGGNDVLYGVTGNDVLYGGDGADLLSGMDGNDTLAGGTGADLLLGGA 1110
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYD----ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G D F + + I F N + D + Q L + + +
Sbjct: 1111 GNDVFLFNTGDGVDTILDFTNGDDLVDLDDAYGINSQAALDAIASDDGSGNAVLDFGNGN 1170
Query: 359 RSILEYTASYEDLIQVI 375
+ +L + LI
Sbjct: 1171 KIVLMGVDYRDLLIGSF 1187
>gi|187939502|gb|ACD38651.1| putative calcium-binding hemolysin protein [Pseudomonas aeruginosa]
Length = 2301
Score = 87.9 bits (216), Expect = 6e-15, Method: Composition-based stats.
Identities = 68/558 (12%), Positives = 143/558 (25%), Gaps = 87/558 (15%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
T + D+ + G T+ + LG + G
Sbjct: 1620 YGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLYGEA-G 1678
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
VY D + D+ + S + + + + +
Sbjct: 1679 NDVYRFDRGWGQDTIQNNDSSTNKVDAIEFGTGIRAEDIILSRNSDDLILLLKGSTDRIT 1738
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEK 258
+ Y + +S + + +G ++ + G N ++ G
Sbjct: 1739 VSSYFSQDATGNSRLEEVRFVNGTTWNIEQIKILVQQQGTAGNDRLYGYAGSDTLSGGLG 1798
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N ++ + + + G GND + G + ++ GND G +G D + + +
Sbjct: 1799 NDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEAGNDVYRFDRGWGQDTV 1858
Query: 319 YRFENAIIVYDANEHKQDFLSD-------------------------------------V 341
Y ++++ DA E ++ +
Sbjct: 1859 YNYDSSTSRVDAIEFGTGIRAEDITLSRNSDDLILLLKGSTDRITISSYFNQDAAGSYRL 1918
Query: 342 ERLRFADQCIDSVNV---------KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
E +RF D + +++ L A + L +G D
Sbjct: 1919 EEIRFVDGQVLNIDAVKALVQQATDGNDRLYGYAVADTLSGGLGNDSLYGYAGNDLLQGD 1978
Query: 393 EGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-------- 439
EG DI + D+ + D L G+D R + ++ +
Sbjct: 1979 EGHDILYGGAGDDTLVGGLGNDYLYGEAGNDVYRFDRGWGQDTIQNNDSNTNKVDAIEFG 2038
Query: 440 ---FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE----------EGRFVTFDSY 486
+ D + +F+ +G+ + D+
Sbjct: 2039 SGISANDILLNRDSDDLVLTLKNSTDRITVSSYFNQDATSNYRLEEIRFVDGQVLNIDAV 2098
Query: 487 LYLGS---------YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
L Y S Y G + + L A + L+
Sbjct: 2099 KALVQKGTTESDRLYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLV 2158
Query: 538 NAFADAPDLVQAGKDHFS 555
+ +AG D +
Sbjct: 2159 GGLGNDYLYGEAGNDVYR 2176
Score = 86.4 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 66/537 (12%), Positives = 132/537 (24%), Gaps = 69/537 (12%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
T + D+ + G T+ + LG + G
Sbjct: 1292 YGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEA-G 1350
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
VY D + D+ S + + + + +
Sbjct: 1351 NDVYRFDRGWGQDTVYNYDSSTSRVDAIEFGTGIRAEDITLSRNSDDLILLLKGSTDRIT 1410
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLD----LTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ Y + + + G +D L N ++ G N
Sbjct: 1411 ISSYFNQDAAGSYRLEEIRFVDGQVLNIDAVKALVQQATDGNDRLYGYAVADTLSGGLGN 1470
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++ + + + G G+D++ G + ++ GND G +G D + + I
Sbjct: 1471 DSLYGYAGNDLLQGDEGHDILYGGAGDDTLVGGLGNDYLYGEAGNDVYRFDRGWGQDTIQ 1530
Query: 320 RFENAIIVYDANEHKQDFLSD-------------------------------------VE 342
++ DA E ++ +E
Sbjct: 1531 NNDSNTNKVDAIEFGSGISANDILLNRDSDDLVLTLKNSTDRITVSSYFNQDATSNYRLE 1590
Query: 343 RLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+RF D + ++ + L A + L +G D E
Sbjct: 1591 EIRFVDGQVLNIDAVKALVQKGTTESDRLYGYAVADTLSGGLGNDSLYGYAGNDLLQGDE 1650
Query: 394 GRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA--------- 439
G D + D+ + D L G+D R + ++ +
Sbjct: 1651 GNDTLYGGAGDDTLVGGLGNDYLYGEAGNDVYRFDRGWGQDTIQNNDSSTNKVDAIEFGT 1710
Query: 440 --FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
++ + D + +FS R +
Sbjct: 1711 GIRAEDIILSRNSDDLILLLKGSTDRITVSSYFSQDATGNSRLEEVRFVNGTTWNIEQIK 1770
Query: 498 VFGSDRGAA--ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ +G A R Y G +L A ++ L + AG D
Sbjct: 1771 ILVQQQGTAGNDRLYGYAGSDTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDD 1827
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/536 (11%), Positives = 126/536 (23%), Gaps = 68/536 (12%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
T + D+ + G T+ + LG + G
Sbjct: 800 YGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEA-G 858
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
VY D + D+ S + + + + +
Sbjct: 859 NDVYRFDRGWGQDTVYNYDSSTSRVDAIEFGTGIRAEDITLSRNSDDLILLLKGSTDRIT 918
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLD----LTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ Y + + + G +D L N ++ G N
Sbjct: 919 ISSYFNQDAAGSYRLEEIRFVDGQVLNIDAVKALVQQATDGNDRLYGYAVADTLSGGLGN 978
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++ + + + G G+D++ G + ++ GND G +G D + + I
Sbjct: 979 DSLYGYAGNDLLQGDEGHDILYGGAGDDTLVGGLGNDYLYGEAGNDVYRFDRGWGQDTIQ 1038
Query: 320 RFENAIIVYDANEHKQDFLSD-------------------------------------VE 342
++ DA E ++ +E
Sbjct: 1039 NNDSNTNKVDAIEFGSGISANDILLNRDSDNLVLTLKNSTDRITVSSYFSQDATSNYRLE 1098
Query: 343 RLRF------------------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+RF D L + L G D+ + +
Sbjct: 1099 EIRFVDGQVLNIDTVKSLVQQATDGNDRLFGYAVADTLSGGLGNDSLYGYAGNDLLQGDE 1158
Query: 385 HFYEFGLSEGRDITF----DSYLYLGSYDDLR---NVFGSDRGAAARHYITHGVKEGRNP 437
G D + YLY + +D+ +G D + I
Sbjct: 1159 GNDTLYGGAGNDTLVGGLGNDYLYGEAGNDVYRFDRGWGQDTLINSDSNIDKTDTIEFGT 1218
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD-LR 496
++ + D + +F+ R D ++
Sbjct: 1219 GIRAEDIILSRNSDDLILLLKGSSDRITVSSYFNQDAAGSYRLEEIRFVDGQVLNIDAVK 1278
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ + R Y +L A ++ L + AG D
Sbjct: 1279 ALVQKGTTESDRLYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDD 1334
Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats.
Identities = 69/568 (12%), Positives = 144/568 (25%), Gaps = 86/568 (15%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+D T + D+ + G T+ + L
Sbjct: 1117 VQQATDGNDRLFGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGNDTLVGGL 1176
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G + G VY D + D+ + S + + + +
Sbjct: 1177 GNDYLYGEA-GNDVYRFDRGWGQDTLINSDSNIDKTDTIEFGTGIRAEDIILSRNSDDLI 1235
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD----LTLIGGVKNYIDLNTE 248
+ + + Y + + + G +D L G ++
Sbjct: 1236 LLLKGSSDRITVSSYFNQDAAGSYRLEEIRFVDGQVLNIDAVKALVQKGTTESDRLYGYA 1295
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G N ++ + + + G GND + G + ++ GND G +G D +
Sbjct: 1296 VADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEAGNDVYR 1355
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---------------------------- 340
+ +Y ++++ DA E ++
Sbjct: 1356 FDRGWGQDTVYNYDSSTSRVDAIEFGTGIRAEDITLSRNSDDLILLLKGSTDRITISSYF 1415
Query: 341 ---------VERLRFADQCIDSVNV---------KQRSILEYTASYEDLIQVIGQDVFES 382
+E +RF D + +++ L A + L +G D
Sbjct: 1416 NQDAAGSYRLEEIRFVDGQVLNIDAVKALVQQATDGNDRLYGYAVADTLSGGLGNDSLYG 1475
Query: 383 MKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
EG DI + D+ + D L G+D R + ++ +
Sbjct: 1476 YAGNDLLQGDEGHDILYGGAGDDTLVGGLGNDYLYGEAGNDVYRFDRGWGQDTIQNNDSN 1535
Query: 438 DA-----------FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE---------- 476
+ D + +F+
Sbjct: 1536 TNKVDAIEFGSGISANDILLNRDSDDLVLTLKNSTDRITVSSYFNQDATSNYRLEEIRFV 1595
Query: 477 EGRFVTFDSYLYLGS---------YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
+G+ + D+ L Y S Y G + + L
Sbjct: 1596 DGQVLNIDAVKALVQKGTTESDRLYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTL 1655
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFS 555
A + L+ + +AG D +
Sbjct: 1656 YGGAGDDTLVGGLGNDYLYGEAGNDVYR 1683
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 73/581 (12%), Positives = 138/581 (23%), Gaps = 90/581 (15%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+D T + D+ + G + + L
Sbjct: 1445 VQQATDGNDRLYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGHDILYGGAGDDTLVGGL 1504
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G + G VY D + D+ + + + + D +
Sbjct: 1505 GNDYLYGEA-GNDVYRFDRGWGQDTIQNNDSNTNKVDAIEFGSGISANDILLNRDSDDLV 1563
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ + Y + + + + G + I VK + T
Sbjct: 1564 LTLKNSTDRITVSSYFNQDATSNYRLEEIRFVDG-----QVLNIDAVKALVQKGTTESDR 1618
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS---------SG 303
+ GY T++ +S+ G +GND++ G+ N+ + +G+D G +G
Sbjct: 1619 LYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLYGEAG 1678
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ---------------------------- 335
D + + I +++ DA E
Sbjct: 1679 NDVYRFDRGWGQDTIQNNDSSTNKVDAIEFGTGIRAEDIILSRNSDDLILLLKGSTDRIT 1738
Query: 336 ---------DFLSDVERLRFADQC----------IDSVNVKQRSILEYTASYEDLIQVIG 376
S +E +RF + + L A + L +G
Sbjct: 1739 VSSYFSQDATGNSRLEEVRFVNGTTWNIEQIKILVQQQGTAGNDRLYGYAGSDTLSGGLG 1798
Query: 377 QDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVF-GSDRGAAARHYITHGV 431
D EG D + D L G +D G+D R + V
Sbjct: 1799 NDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEAGNDVYRFDRGWGQDTV 1858
Query: 432 KEGRNPD---------------------AFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ L + + + G
Sbjct: 1859 YNYDSSTSRVDAIEFGTGIRAEDITLSRNSDDLILLLKGSTDRITISSYFNQDAAGSYRL 1918
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
+G+ + D+ L N A G L+
Sbjct: 1919 EEIRFVDGQVLNIDAVKALVQQATDGNDRLYGYAVADTLSGGLGNDSLYGYAGNDLLQGD 1978
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
H+ L D + G D+ +G F+
Sbjct: 1979 EGHDILYGGAGDDTLVGGLGNDY--LYGEAGNDVYRFDRGW 2017
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 51/411 (12%), Positives = 105/411 (25%), Gaps = 56/411 (13%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
T + D+ + G T+ + LG + G
Sbjct: 1785 YGYAGSDTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEA-G 1843
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
VY D + D+ S + + + + +
Sbjct: 1844 NDVYRFDRGWGQDTVYNYDSSTSRVDAIEFGTGIRAEDITLSRNSDDLILLLKGSTDRIT 1903
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLD----LTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ Y + + + G +D L N ++ G N
Sbjct: 1904 ISSYFNQDAAGSYRLEEIRFVDGQVLNIDAVKALVQQATDGNDRLYGYAVADTLSGGLGN 1963
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++ + + + G G+D++ G + ++ GND G +G D + + I
Sbjct: 1964 DSLYGYAGNDLLQGDEGHDILYGGAGDDTLVGGLGNDYLYGEAGNDVYRFDRGWGQDTIQ 2023
Query: 320 RFENAIIVYDANEHKQDFLSD-------------------------------------VE 342
++ DA E ++ +E
Sbjct: 2024 NNDSNTNKVDAIEFGSGISANDILLNRDSDDLVLTLKNSTDRITVSSYFNQDATSNYRLE 2083
Query: 343 RLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+RF D + ++ + L A + L +G D E
Sbjct: 2084 EIRFVDGQVLNIDAVKALVQKGTTESDRLYGYAVADTLSGGLGNDSLYGYAGNDLLQGDE 2143
Query: 394 GRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
G D + D+ + D L G+D R + ++ +
Sbjct: 2144 GNDTLYGGAGDDTLVGGLGNDYLYGEAGNDVYRFDRGWGQDTIQNNDSSTN 2194
Score = 80.6 bits (197), Expect = 7e-13, Method: Composition-based stats.
Identities = 72/561 (12%), Positives = 149/561 (26%), Gaps = 87/561 (15%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ D+ G G T+ + G + + G +Y D +
Sbjct: 648 AGNDSLYGNQGNDLLSGGTGNDTLFGGLGNDTLIGGAGNDYLHG-DTGNDIYRFDRGWGQ 706
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
D+ S + + + + + + Y +
Sbjct: 707 DTVYNYDSSANRVDAIEFGTGIRAEDIILSRNSDDLILLLKGSSDHITVSSYFNQDAAGS 766
Query: 216 SPFIQTIYDSGGDDLLD----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ + G +D L G ++ ++ G N ++ + + +
Sbjct: 767 YRLEEIRFVDGQVLNIDAVKALVQKGTTESDRLYGYAVADTLSGGLGNDSLYGYAGNDLL 826
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G GND + G + ++ GND G +G D + + +Y ++++ DA
Sbjct: 827 QGDEGNDTLYGGAGDDTLVGGLGNDYLQGEAGNDVYRFDRGWGQDTVYNYDSSTSRVDAI 886
Query: 332 EHKQDFLSD-------------------------------------VERLRFADQCIDSV 354
E ++ +E +RF D + ++
Sbjct: 887 EFGTGIRAEDITLSRNSDDLILLLKGSTDRITISSYFNQDAAGSYRLEEIRFVDGQVLNI 946
Query: 355 NV---------KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----D 400
+ L A + L +G D EG DI + D
Sbjct: 947 DAVKALVQQATDGNDRLYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGHDILYGGAGDD 1006
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-----------FKALEYIASH 449
+ + D L G+D R + ++ + +
Sbjct: 1007 TLVGGLGNDYLYGEAGNDVYRFDRGWGQDTIQNNDSNTNKVDAIEFGSGISANDILLNRD 1066
Query: 450 EDLINAFADAPDLVQVGKDHFS-----NFGCEEGRFVTFDSYLYLGSYDDLRNV------ 498
D + +FS N+ EE RFV ++
Sbjct: 1067 SDNLVLTLKNSTDRITVSSYFSQDATSNYRLEEIRFVDGQVLNIDTVKSLVQQATDGNDR 1126
Query: 499 -FGSDRGAAARH-------YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
FG Y G + + L A ++ L+ + +AG
Sbjct: 1127 LFGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGNDTLVGGLGNDYLYGEAG 1186
Query: 551 KDHFS-NFGYEEGRSITFNPD 570
D + + G+ + I + +
Sbjct: 1187 NDVYRFDRGWGQDTLINSDSN 1207
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 57/407 (14%), Positives = 106/407 (26%), Gaps = 74/407 (18%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG+ N + + + G N ++ + + + G +GND + G N+ +GND
Sbjct: 628 GGLGNDLVKGSSGQDYLFGLAGNDSLYGNQGNDLLSGGTGNDTLFGGLGNDTLIGGAGND 687
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---------------- 340
G +G D + + +Y ++++ DA E ++
Sbjct: 688 YLHGDTGNDIYRFDRGWGQDTVYNYDSSANRVDAIEFGTGIRAEDIILSRNSDDLILLLK 747
Query: 341 ---------------------VERLRFADQCIDSV---------NVKQRSILEYTASYED 370
+E +RF D + ++ + L A +
Sbjct: 748 GSSDHITVSSYFNQDAAGSYRLEEIRFVDGQVLNIDAVKALVQKGTTESDRLYGYAVADT 807
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVF-GSDRGAAARH 425
L +G D EG D + D L G +D G+D R
Sbjct: 808 LSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEAGNDVYRFDRG 867
Query: 426 YITHGVKEGRNPD---------------------AFKALEYIASHEDLINAFADAPDLVQ 464
+ V + L + + +
Sbjct: 868 WGQDTVYNYDSSTSRVDAIEFGTGIRAEDITLSRNSDDLILLLKGSTDRITISSYFNQDA 927
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
G +G+ + D+ L N A G
Sbjct: 928 AGSYRLEEIRFVDGQVLNIDAVKALVQQATDGNDRLYGYAVADTLSGGLGNDSLYGYAGN 987
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
L+ H+ L D + G D+ +G F+
Sbjct: 988 DLLQGDEGHDILYGGAGDDTLVGGLGNDY--LYGEAGNDVYRFDRGW 1032
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/361 (11%), Positives = 89/361 (24%), Gaps = 52/361 (14%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+D T + D+ + G + + L
Sbjct: 1938 VQQATDGNDRLYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGHDILYGGAGDDTLVGGL 1997
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G + G VY D + D+ + + + + D +
Sbjct: 1998 GNDYLYGEA-GNDVYRFDRGWGQDTIQNNDSNTNKVDAIEFGSGISANDILLNRDSDDLV 2056
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD----LTLIGGVKNYIDLNTE 248
+ + Y + + + + G +D L G ++
Sbjct: 2057 LTLKNSTDRITVSSYFNQDATSNYRLEEIRFVDGQVLNIDAVKALVQKGTTESDRLYGYA 2116
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G N ++ + + + G GND + G + ++ GND G +G D +
Sbjct: 2117 VADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLYGEAGNDVYR 2176
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQ--------------------------------- 335
+ I +++ DA E
Sbjct: 2177 FDRGWGQDTIQNNDSSTNKVDAIEFGTGIRAEDIILSRNSDDLILLLKGSTDRITVSSYF 2236
Query: 336 ----DFLSDVERLRFADQC----------IDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
S +E +RF + + L A + L +G D
Sbjct: 2237 SQDATGNSRLEEVRFVNGTTWNIEQIKILVQQQGTAGNDRLYGYAGSDTLSGGLGNDSLY 2296
Query: 382 S 382
Sbjct: 2297 G 2297
>gi|163851089|ref|YP_001639132.1| heme peroxidase [Methylobacterium extorquens PA1]
gi|163662694|gb|ABY30061.1| Animal haem peroxidase [Methylobacterium extorquens PA1]
Length = 3587
Score = 87.5 bits (215), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 65/193 (33%), Gaps = 8/193 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + G V N + G E + T+ + ++++G +GN+ + G ++
Sbjct: 1890 DDDIEGDVGNDAIYAGSGDDRVDGGEGDDTLLGNDGADTLIGRTGNNTLDGGDDDDQLSG 1949
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----DANEHKQDFLSDVERLRFA 347
GND G +G DT Y P Y R +V A D L+ +E+++
Sbjct: 1950 GHGNDRLIGGAGTDTAIYSGPIAAYSFERNAQGEVVVSDNLGAEGDGVDTLTTIEQIQMG 2009
Query: 348 DQ----CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + + I+ TA L G D+ + G F
Sbjct: 2010 NDLTPYALVANGTAAIDIVVGTAGNNTLSGGAGNDLVFAGAGNDNVLWRTGDGRDFVDGG 2069
Query: 404 YLGSYDDLRNVFG 416
+ N G
Sbjct: 2070 AGTDSFRIMNGTG 2082
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 70/291 (24%), Gaps = 24/291 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ TI GDD + + G + + E + +
Sbjct: 3297 GDVLNGTAGADTILGLDGDDNI----LAGGGADVVRAGAGNDFVDAGEGRDVVFAGDGDD 3352
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
V+ G D+V G+ N+ +GND+ +G DT L+ + +
Sbjct: 3353 DVLSGGGADMVYGDGGNDRILAGAGNDLVTAGAGRDTVIGGEGDDLFVAETGDGDDTYWG 3412
Query: 330 ---ANEHKQDFL------SDVER---LRFADQCIDSVNVKQRSILEY------TASYEDL 371
D L +++ A + + R +L + +D+
Sbjct: 3413 DEMGGGLGSDTLDMSAITANIAVNLGTGLAGRGSATSTQSGRDVLWGVENVVTGSGNDDI 3472
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL--GSYDDLRNVFGSDRGAAARHYITH 429
+V + + + D+ G DL + A + +
Sbjct: 3473 TASDAANVMDGGEGSDTYRFGSAAAANGDTIEGFRPGDKIDLSAIDADAGQAGNQAFTLA 3532
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ D + +
Sbjct: 3533 TGAAFTGVGQLLVTQETRDDGDYVVVQGNTAGDASPEFKLAIKGNTAPTAA 3583
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/171 (11%), Positives = 53/171 (30%), Gaps = 9/171 (5%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ GND +I + ++ + +G+D + +G+D I + E
Sbjct: 1318 GTDGNDTIITDFGDDGIWGDAGDDRIEAGAGVDLV---NGGAGDDIITDSGDTGDFLKGE 1374
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D +++ ++ + + + + ++ G D +
Sbjct: 1375 DGNDVIAN------SNGIDILMGGRGKDAIFVGVDATEVFAGEGDDFVIGGDDADLLMGN 1428
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
EG D + + D +F + G + + ++ +
Sbjct: 1429 EGDDWMEGGGGFDTTAGDNSELFFNSAIKGHDVMFAGGDEHDFDGESGDDI 1479
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 26/89 (29%), Gaps = 2/89 (2%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N T + G + + G N+ +GND+ +G G DTF
Sbjct: 2235 DTFTGTALNRTFNGTAGDDIANG--ADTALFGIQPNDTMNGGAGNDILNGRGGNDTFIQV 2292
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ ++ +
Sbjct: 2293 STDGRDRVDGGAGTDTYQLNGAAGPETFR 2321
Score = 42.9 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 60/262 (22%), Gaps = 24/262 (9%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
TFF + ++ N N Q S D +++
Sbjct: 1828 TFFTPTGATGVEVRVVANWTSTVAGNTGLQQTASIQSAFVGTAAAEDITGSATPNVILGR 1887
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+D+ +G D + EG D + D L G++
Sbjct: 1888 DGDDDIEGDVGNDAIYAGSGDDRVDGGEGDDTLLGNDG----ADTLIGRTGNNTLDGGDD 1943
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
G + A A + I A++ + + +G
Sbjct: 1944 DDQLSGGHGNDRLIGGAGTDTAIYSGPIAAYSFERNAQGEVVVSDNLGAEGDGVDTLTTI 2003
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
D ++ AA + A + L +
Sbjct: 2004 EQIQMGNDLTPYALVANGTAAI-----------------DIVVGTAGNNTLSGGAGNDLV 2046
Query: 546 LVQAGKDHFSNFGYEEGRSITF 567
AG D+ + G F
Sbjct: 2047 FAGAGNDNVL---WRTGDGRDF 2065
>gi|325204399|gb|ADY99852.1| Iron-regulated protein frpC [Neisseria meningitidis M01-240355]
Length = 1010
Score = 87.1 bits (214), Expect = 8e-15, Method: Composition-based stats.
Identities = 61/456 (13%), Positives = 120/456 (26%), Gaps = 66/456 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 446 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 505
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 506 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 565
Query: 188 --IVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y +Y + G+DLL+ G N
Sbjct: 566 VLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLN----GDAGNDS 621
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 622 IYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 681
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 682 SDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVT 741
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 742 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGSTLNGGLGD 801
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D + + Y +G
Sbjct: 802 DYLYGADGNDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDVLNGG 852
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ L ++ LI + G D +
Sbjct: 853 EGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 888
>gi|220924184|ref|YP_002499486.1| Glycosyltransferase-like protein [Methylobacterium nodulans ORS
2060]
gi|219948791|gb|ACL59183.1| Glycosyltransferase-like protein [Methylobacterium nodulans ORS
2060]
Length = 597
Score = 87.1 bits (214), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 63/198 (31%), Gaps = 29/198 (14%)
Query: 412 RNVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
G R+ +E F A Y+ + D+ A D +H+
Sbjct: 1 MPATGRVTADLPRNSAREEFREALTAYRLFDAEWYLRVNGDVKAAGLDP-------LEHY 53
Query: 471 SNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 527
G EGR+ FD Y + HY + +P F A
Sbjct: 54 LGSGAAEGRWPNPLFDPAHYADK------AGLAAGENPLLHYHRAALPCLLDPHPLFDAA 107
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGS 585
Y ++ + +H+ + G+ G + F+P YL +Y D+
Sbjct: 108 FYTRTY------LSRDGLPPIKPLEHYLSVGWRLGFRPNPAFDPRWYLATYADVR----E 157
Query: 586 DRSAAAQHYITHGMKEGR 603
+ HY + G +EGR
Sbjct: 158 SGTEPLSHYASSGQREGR 175
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 57/169 (33%), Gaps = 25/169 (14%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ YL D++ HY+ G EGR P+ F Y + A
Sbjct: 29 LFDAEWYLRVNGDVKAA----GLDPLEHYLGSGAAEGRWPNPLFDPAHYADKAG--LAAG 82
Query: 457 ADAPDLVQ-VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ + FD+ Y +Y G HY++ G
Sbjct: 83 ENPLLHYHRAALPCLLDP------HPLFDAAFYTRTYLSRD---GLPPIKPLEHYLSVGW 133
Query: 516 KEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ G P+ AF Y+A++ D+ + H+++ G EGR
Sbjct: 134 RLGFRPNPAFDPRWYLATYADVRES-------GTEPLSHYASSGQREGR 175
Score = 41.7 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 15/80 (18%)
Query: 383 MKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
++H+ G G + FD YL +Y D+R HY + G +EGR
Sbjct: 125 LEHYLSVGWRLGFRPNPAFDPRWYLATYADVR----ESGTEPLSHYASSGQREGR----- 175
Query: 441 KALEYIASHEDLINAFADAP 460
+ A D+ A A
Sbjct: 176 ----WPAGDSDVSRAPARGG 191
>gi|325141824|gb|EGC64270.1| Iron-regulated protein frpC [Neisseria meningitidis 961-5945]
Length = 1471
Score = 87.1 bits (214), Expect = 9e-15, Method: Composition-based stats.
Identities = 75/501 (14%), Positives = 139/501 (27%), Gaps = 84/501 (16%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS-----HNALHEIGHAL 132
+ + + + I D G G T + + ++ +A
Sbjct: 905 NGNDVLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYAT 964
Query: 133 GLMHPGSYNGGYPVYGVDNDYEND---------SFLTSVMSYFMPQDSMMDASFGYCATP 183
G + G + E + S +V SYF S
Sbjct: 965 GRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDN 1024
Query: 184 M-VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
V D+ V+K+ + + G++ Y+ +Y + GDDLL+ G
Sbjct: 1025 GKVLDVATVKKL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDA 1078
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
N + ++ G E N + + + + G GND + G N+ +GND +
Sbjct: 1079 GNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLE 1138
Query: 300 GSSGLDTFFYYAPSYLYKIYRFE------------------------------------- 322
G SG DT+ + +Y ++
Sbjct: 1139 GGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGS 1198
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQ 373
+ V ++ ++ + F + + V + L S L
Sbjct: 1199 GQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNG 1258
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+G D G D +Y G+ +D + + Y +G
Sbjct: 1259 GLGDDYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDV 1309
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+ L ++ LI + G D + EG ++
Sbjct: 1310 LNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG---EGFGQDTVYNYHVDKNS 1366
Query: 494 DLRNVFGSDRGAAARHYITHG 514
D AA H+I G
Sbjct: 1367 DTM--HFKGFKAADVHFIRSG 1385
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/456 (13%), Positives = 121/456 (26%), Gaps = 66/456 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 707 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 766
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 767 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 826
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 827 VLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 882
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + + + G+ GND + G N+ +GND +G SG
Sbjct: 883 IYSGNGNDTLDGGEGNDALYGYNGNDVLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 942
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 943 SDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 1002
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 1003 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGD 1062
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D + + Y +G
Sbjct: 1063 DYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDVLNGG 1113
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ L ++ LI + G D +
Sbjct: 1114 EGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 1149
>gi|163747756|ref|ZP_02155098.1| Hemolysin-type calcium-binding protein [Oceanibulbus indolifex
HEL-45]
gi|161378982|gb|EDQ03409.1| Hemolysin-type calcium-binding protein [Oceanibulbus indolifex
HEL-45]
Length = 1305
Score = 87.1 bits (214), Expect = 9e-15, Method: Composition-based stats.
Identities = 57/334 (17%), Positives = 105/334 (31%), Gaps = 30/334 (8%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GNNI +PF+ + + GDD++D+ + ID + + GYE + +I
Sbjct: 146 GNNIGSTTYANYQNPFLIEVDGTEGDDIMDVGFTDVDGDQIDGTDGNNEVVYGYEGDDSI 205
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++V G G+D + G ++ N DT Y + +
Sbjct: 206 NAGIGHDTVYGGDGDDTLAGGYGADIIDGGKDN---------DTADYSTSTGGVTVSLTT 256
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
++ + D L+D+E L + + + L+ A + L G+D
Sbjct: 257 GKGT---GSDAQGDTLTDIENLTGSRFNDVLTGDDEDNRLDGGAGADKLYGADGEDTLIG 313
Query: 383 MKHFYEFGLSEGRDITFD-------------SYLYLGSYDDLRNVFGSDRGA-----AAR 424
+ D F +L G+ DD D A
Sbjct: 314 GDGADLLDGGKDDDTLFGRAGIDTLLGGKGKDHLDGGAGDDRLEGGEDDDILLGGDGADA 373
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ G +L A + L+ D G D + ++ +
Sbjct: 374 LFGGEGKDILEGGLGDDSLNGGADDDILLGGAGDDTLNGGAGDDTLTGGLGKDSFVIEAA 433
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
Y LG+ +D+ + + A + EG
Sbjct: 434 DYSALGTPEDVLDALIRENLAELTAWTAKKEAEG 467
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/250 (16%), Positives = 74/250 (29%), Gaps = 26/250 (10%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D + ++ D GIG T+ + + G +
Sbjct: 188 GTDGNNEVVYGYEGDDSINAGIGHDTVYGGDGDDTLAGGYGADIIDGGKDNDTADYSTST 247
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI-------------VAVQKIYGAP- 198
LT+ +D+ K+YGA
Sbjct: 248 GGVTVSLTTGKGTGSDAQGDTLTDIENLTGSRFNDVLTGDDEDNRLDGGAGADKLYGADG 307
Query: 199 -------KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLN 246
G+ + K + I T+ G D LD L GG + I L
Sbjct: 308 EDTLIGGDGADLLDGGKDDDTLFGRAGIDTLLGGKGKDHLDGGAGDDRLEGGEDDDILLG 367
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ ++ G E + +S+ G + +D+++G + ++ +G+D G G D+
Sbjct: 368 GDGADALFGGEGKDILEGGLGDDSLNGGADDDILLGGAGDDTLNGGAGDDTLTGGLGKDS 427
Query: 307 FFYYAPSYLY 316
F A Y
Sbjct: 428 FVIEAADYSA 437
Score = 42.9 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ S + G+D ++ GG + I G E + + T
Sbjct: 689 GGNDELVGSLNNELFSGGTGND----SIFGGGGADTIMGGSGSDYIEGGEGDDVLYTGTG 744
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G G+DV+ +S ++ +GND SSG DT + + + +
Sbjct: 745 DDTLDGGDGDDVLHNSSGDDSLVGGAGNDRLVASSGDDTL--EGGADNDTLIGGIHNDSL 802
Query: 328 YDANEHKQ 335
+ +
Sbjct: 803 DGGSGDDR 810
>gi|307826432|ref|ZP_07656631.1| Hemolysin-type calcium-binding region [Methylobacter tundripaludum
SV96]
gi|307732529|gb|EFO03407.1| Hemolysin-type calcium-binding region [Methylobacter tundripaludum
SV96]
Length = 843
Score = 87.1 bits (214), Expect = 9e-15, Method: Composition-based stats.
Identities = 56/382 (14%), Positives = 108/382 (28%), Gaps = 46/382 (12%)
Query: 50 NAQEVARWALGEWSK-------VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI 102
N + W+ W+ V + F + S + G +
Sbjct: 467 NGMDTYDWSATSWAADGTLTGGVAEQNFNDVITGSAQADKINGLGGNDALDGGAGNDQID 526
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
+ D+ G G I EI A GL P + +
Sbjct: 527 GGEGNDLIAGGAGSDIIHGGAGNDEILSATGLNVPQRKAPDDTWQVPAG-----KTVWAQ 581
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI---EVQQKDSPFI 219
S + ++ + Y + D A IYG G++ +
Sbjct: 582 GSTWGIANNPNNTYTIYGGGSLALD-NAPDTIYG----DAGDDHITGGHGDDYIDGGADN 636
Query: 220 QTIYDSGGDDLLD---------------------LTLIGGVKNYIDLNTESWSSIGGYEK 258
++ +GG+DL+D +++D I G K
Sbjct: 637 DVLWGNGGNDLIDGGTGDDNIYGDGVIGSGFYQTTPAFIQGNDFLDAGEGR-DWIIGGGK 695
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNS--ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N + T + + G ++ ++ + +G+D+ G DT +
Sbjct: 696 NDVLLGGTGNDFLWGDDKSETLLSGQYHGKDYLDGGAGDDLLIGGGNDDTLIGGIGNDTL 755
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
EN + + D + ++L D + + L + + LI G
Sbjct: 756 LGDDNENNLALPYHGNDDLDGGAGDDKLYGGDGNDTLLGGSENDTLYGDSGNDILIGGTG 815
Query: 377 QDVFESMKHFYEF--GLSEGRD 396
D+ + + +EGRD
Sbjct: 816 NDIMYGGEGNDTYLINANEGRD 837
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/538 (10%), Positives = 125/538 (23%), Gaps = 53/538 (9%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D I + G + D G T + +
Sbjct: 306 GNDQNNILNGLGGNDILVGGAGNDTLNGGTGNDTLIGGQDSDTYIYSQGDGVDT-LIDSD 364
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT----PMVSDIVAV 191
G D + +D + + Q + D T I+
Sbjct: 365 GSGQIVWDLVNIQGDANALSDKWKKFNTHVWQDQKNPQDPISYNLQTETDGSQTLYIIKN 424
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD--------SGGDDLLDLTLIG------ 237
+ G+ + + + T + G D D +
Sbjct: 425 GDVLKVDNWQPGDLGISLGAGAQPLAPLHTYNGDQRAPVTVNNGMDTYDWSATSWAADGT 484
Query: 238 -------GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
N + + I G N + + + G GND++ G + +++
Sbjct: 485 LTGGVAEQNFNDVITGSAQADKINGLGGNDALDGGAGNDQIDGGEGNDLIAGGAGSDIIH 544
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+GND ++GL+ + + + + +
Sbjct: 545 GGAGNDEILSATGLN--VPQRKAPDDTWQVPAGKTVWAQGSTWGIANNPNNTYTIYGGGS 602
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ N + A + + G D + + G D+ Y D
Sbjct: 603 LALDNAP--DTIYGDAGDDHITGGHGDDYIDGGADNDVLWGNGGNDLIDGGTGDDNIYGD 660
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD-- 468
G + A + G + ++ L+ + +
Sbjct: 661 GVIGSGFYQTTPAFIQGNDFLDAGEGR---DWIIGGGKNDVLLGGTGNDFLWGDDKSETL 717
Query: 469 --------HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY--------IT 512
+ + G + + + L + G D
Sbjct: 718 LSGQYHGKDYLDGGAGDDLLIGGGNDDTLIGGIGNDTLLGDDNENNLALPYHGNDDLDGG 777
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
G + D L + ++ L + + G D +G E + N +
Sbjct: 778 AGDDKLYGGDGNDTLLGGSENDTLYGDSGNDILIGGTGND--IMYGGEGNDTYLINAN 833
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/258 (16%), Positives = 76/258 (29%), Gaps = 22/258 (8%)
Query: 83 SSNNGYVCTPRYDSRYFME-----------INFDKADVWRYGIGKGTILSHNALHEIGHA 131
S G P + I D D G + A +++
Sbjct: 582 GSTWGIANNPNNTYTIYGGGSLALDNAPDTIYGDAGDDHITGGHGDDYIDGGADNDVLWG 641
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV-- 189
G G D + + T+ + +D++
Sbjct: 642 NGGNDLIDGGTGDDNIYGDGVIGSGFYQTTPAFIQGNDFLDAGEGRDWIIGGGKNDVLLG 701
Query: 190 --AVQKIYGAPKG-SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVK 240
++G K +L + Y + + G DD L D L +
Sbjct: 702 GTGNDFLWGDDKSETLLSGQYHGKDYLDGGAGDDLLIGGGNDDTLIGGIGNDTLLGDDNE 761
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N + L + G + + ++++G S ND + G+S N++ +GND+ G
Sbjct: 762 NNLALPYHGNDDLDGGAGDDKLYGGDGNDTLLGGSENDTLYGDSGNDILIGGTGNDIMYG 821
Query: 301 SSGLDTFFYYAPSYLYKI 318
G DT+ A I
Sbjct: 822 GEGNDTYLINANEGRDAI 839
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/427 (8%), Positives = 87/427 (20%), Gaps = 61/427 (14%)
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ ++ + + + D G ++ + + G
Sbjct: 466 NNGMDTYDWSATSWAADGTLTGGVAEQNFNDVITGSAQADKINGLGGNDALDGGAGNDQI 525
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYE 257
+ I+ G+D + ++ + + G
Sbjct: 526 DGGEG-NDLIAGGAGSDIIHGGAGNDEILSATGLNVPQRKAPDDTWQVPAGKTVWAQGST 584
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + + G + ++A + + +G+D G G D + +
Sbjct: 585 WGIANNPN----NTYTIYGGGSLALDNAPDTIYGDAGDDHITGGHGDD--YIDGGADNDV 638
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
++ ++ + V F + L+ + +I
Sbjct: 639 LWGNGGNDLIDGGTGDDNIYGDGVIGSGFYQTTPAFIQ--GNDFLDAGEGRDWIIGGGKN 696
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
DV + + + Y D
Sbjct: 697 DVLLGGTGNDFLWGDDKSETLLSGQYHGKDYLD--------------------------- 729
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
D + D + + Y N
Sbjct: 730 ----------------GGAGDDLLIGGGNDDTLIGGIGNDTLLGDDNENNLALPY--HGN 771
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+ Y G L + ++ LI + G D +
Sbjct: 772 DDLDGGAGDDKLYGGDGNDTLLGGSENDTLYGDSGNDILIGGTGNDIMYGGEGNDTYLIN 831
Query: 558 GYEEGRS 564
EGR
Sbjct: 832 -ANEGRD 837
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNT-ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ LD+ L + + + + + G E+N + + + G GND+++G +
Sbjct: 267 STINPLDIQLASDQQTDLSGGKRDGYQNNTGQEQNDLLIGNDQNNILNGLGGNDILVGGA 326
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
N+ +GND G DT+ Y + + + + +
Sbjct: 327 GNDTLNGGTGNDTLIGGQDSDTYIYSQGDGVDTLIDSDGSGQIV 370
>gi|251825708|gb|ACT20904.1| protease [Microbacterium sp. GZ]
Length = 130
Score = 87.1 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 45/128 (35%), Gaps = 10/128 (7%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFM 100
P+ Q A+ +L W+ V ++ F + N + P
Sbjct: 3 TPHHQAKAKLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPDALKG 62
Query: 101 EINF--DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDS 157
+ + + + G HEIGH LGL HPG YN G D Y D+
Sbjct: 63 QSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAEDT 122
Query: 158 FLTSVMSY 165
SVMSY
Sbjct: 123 RAYSVMSY 130
>gi|209524242|ref|ZP_03272792.1| Integrin alpha beta-propellor repeat protein [Arthrospira maxima
CS-328]
gi|209495333|gb|EDZ95638.1| Integrin alpha beta-propellor repeat protein [Arthrospira maxima
CS-328]
Length = 803
Score = 87.1 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 14/186 (7%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ I+ GG+D L G +YI+ N I G N ++ +++
Sbjct: 57 IYGNQGNDQIFGGGGNDTLY---GGQGDDYIEGNEG-DDLIFGNAGNDILSGGPGNDTIF 112
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GNDV+ G++ NN+ + G+D+ G G D + I+ +Y +
Sbjct: 113 GGPGNDVIDGDAGNNLIYGGQGSDILRGGEGNDLIL--GDAGENTIFGGPGNDTLYGGTD 170
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
Q + + I+ + + +G D+ + + +
Sbjct: 171 DDQ--------IGGGLGNDLILGGSGDDIISGGEGDDTIYGGLGNDLILADEGNNILFGN 222
Query: 393 EGRDIT 398
G +
Sbjct: 223 SGSNTL 228
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/249 (12%), Positives = 57/249 (22%), Gaps = 19/249 (7%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + ++V ++ GN N+ F GND G G D + I+
Sbjct: 37 LGVFLGSGNDTVRSLVDPALIYGNQGNDQIFGGGGNDTLYGGQGDD--YIEGNEGDDLIF 94
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
I+ + + +++ + L G D+
Sbjct: 95 GNAGNDILSGGPGNDT--------IFGGPGNDVIDGDAGNNLIYGGQGSDILRGGEGNDL 146
Query: 380 FESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D + D + G +DL D G
Sbjct: 147 ILGDAGENTIFGGPGNDTLYGGTDDDQIGGGLGNDLILGGSGDDII----SGGEGDDTIY 202
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS-NFGCEEGRFVTFDSYLYLGSYDD 494
+ + L + G D F G D D
Sbjct: 203 GGLGNDLILADEGNNILFGNSGSNTLVGGTGNDTFVLEAGNGWTTIADTDQIFDFTPGQD 262
Query: 495 LRNVFGSDR 503
+ G
Sbjct: 263 TILLLGDAP 271
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/255 (19%), Positives = 79/255 (30%), Gaps = 20/255 (7%)
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS- 171
G G T+ S I G G +YG D + + + +
Sbjct: 42 GSGNDTVRSLVDPALIYGNQGNDQIFGGGGNDTLYGGQGDDYIEGNEGDDLIFGNAGNDI 101
Query: 172 -----MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
D FG ++ IYG + TI+
Sbjct: 102 LSGGPGNDTIFGGPGNDVIDGDAGNNLIYGGQGSDILRGGEG-NDLILGDAGENTIFGGP 160
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D L GG + I G + I+ +++ G GND+++ + N
Sbjct: 161 GNDTL----YGGTDDDQIGGGLGNDLILGGSGDDIISGGEGDDTIYGGLGNDLILADEGN 216
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
N+ F +SG++ G +G DTF A + I + QD L
Sbjct: 217 NILFGNSGSNTLVGGTGNDTFVLEAGNGWTTIADTD----QIFDFTPGQDT-----ILLL 267
Query: 347 ADQCIDSVNVKQRSI 361
D ID +N+
Sbjct: 268 GDAPIDQLNIILDDT 282
Score = 47.1 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 25/227 (11%), Positives = 49/227 (21%), Gaps = 21/227 (9%)
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + L D + L + + G D+
Sbjct: 38 GVFLGSGNDTVRSLVDPALIYGNQGNDQIFGGGGNDTLYGGQGDDYIEGNEGDDLIFGNA 97
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G D F G +D+ + G L
Sbjct: 98 GNDILSGGPGNDTIFG-----GPGNDVIDG-------------DAGNNLIYGGQGSDILR 139
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
++ ++ + G D ++ + L LG D G
Sbjct: 140 GGEGNDLILGDAGENTIFGGPGNDTLYGGTDDDQIGGGLGNDLILGGSGDDIISGGEGDD 199
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
Y G + L + L+ + +++AG
Sbjct: 200 TI---YGGLGNDLILADEGNNILFGNSGSNTLVGGTGNDTFVLEAGN 243
>gi|254411801|ref|ZP_05025577.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196181523|gb|EDX76511.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 2367
Score = 86.8 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 64/498 (12%), Positives = 131/498 (26%), Gaps = 32/498 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + D D G T+ + G
Sbjct: 1726 YADAGNDTLAGGADNDYLDGGAGEDLLSGDDGNDQLYGQQGNDTLEGGTGDDYLEGGDGE 1785
Query: 135 MHPGSYNGGYPVYG------VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
G +YG ++ ND S + D D +G ++
Sbjct: 1786 DDLTGGTGNDRLYGKRDRDTLNGGDGNDLLDGGDSSDQLNGDDGNDTLYGRAGLDTLTGG 1845
Query: 189 VAVQKIYGAPKGS-----LGNNIYKI---EVQQKDSPFIQTIYDSGGDDLL-----DLTL 235
V ++G G ++ + Q +Y + +D L + L
Sbjct: 1846 VGNDALWGGDDADMLSGDAGTDVLQGGDGNDQLSGGEGNDRLYGNADNDTLEGNTGNDLL 1905
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
GG + L + + + G + N + + + G +G+D + G + + SG+
Sbjct: 1906 NGGAGDDHLLGNDGFDRLYGKKGNDWLDGGDGSDQLRGEAGDDTLFGQAGTDYLDGGSGD 1965
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G +G D + + + ++ + Q L
Sbjct: 1966 DQLYGGTGRDRLY--GRQGEDVLDGGADHDLLQGGSGDDQ--------LYGQTGNDILNG 2015
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ ++ + L G D + + D F + +
Sbjct: 2016 GRGDDLVWGGDHNDTLDGGTGDDYLDGGSGDDQINGGGDNDQIFGQSGIDILNGGSGHDY 2075
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ G + +LE A ++ L + G D
Sbjct: 2076 LEGGLDNDQLSGDRGNDQLYGQQGDDSLEGNAGNDYLEGGVGNDTLAGDRGNDQLYGQDG 2135
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
++ D YL D + G + Y G + + LE + +
Sbjct: 2136 DDILNGGTDDD-YLDGGADNDQLLGGKGND--QLYGQAGDDLLDSGEGDDYLEGGSGDDH 2192
Query: 536 LINAFADAPDLVQAGKDH 553
L+ D Q G ++
Sbjct: 2193 LLGGKGDDQLYGQQGTNY 2210
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 65/503 (12%), Positives = 119/503 (23%), Gaps = 20/503 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + D D G+G + + + G
Sbjct: 1808 GGDGNDLLDGGDSSDQLNGDDGNDTLYGRAGLDTLTGGVGNDALWGGDDADMLSGDAGTD 1867
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+G + G + + + + +++ G +
Sbjct: 1868 VLQGGDGNDQLSGGEGNDRLYGNADNDTLEGNTGNDLLNGGAGDDHLLGNDGFDRLYGKK 1927
Query: 196 GAPKGSLGNNIYK-----IEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDL 245
G G+ + + + GDD L L G +
Sbjct: 1928 GNDWLDGGDGSDQLRGEAGDDTLFGQAGTDYLDGGSGDDQLYGGTGRDRLYGRQGEDVLD 1987
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G + + T + + G G+D+V G N+ +G+D DG SG D
Sbjct: 1988 GGADHDLLQGGSGDDQLYGQTGNDILNGGRGDDLVWGGDHNDTLDGGTGDDYLDGGSGDD 2047
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---VERLRFADQCIDSVNVKQRSIL 362
F + I D+L ++L + L
Sbjct: 2048 QI----NGGGDNDQIFGQSGIDILNGGSGHDYLEGGLDNDQLSGDRGNDQLYGQQGDDSL 2103
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
E A + L +G D + + +G DI N
Sbjct: 2104 EGNAGNDYLEGGVGNDTLAGDRGNDQLYGQDGDDILNGGTDDDYLDGGADNDQLLGGKGN 2163
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ Y G + + LE + + L+ D Q G ++ +
Sbjct: 2164 DQLYGQAGDDLLDSGEGDDYLEGGSGDDHLLGGKGDDQLYGQQGTNYLDGGAGHDYIEGG 2223
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
G D + G G L + + L +
Sbjct: 2224 DGIDTLFGQSGDDYLIGGDGDDILD---GGSGYDWLEGGAGNDQLYAGSGDDILDGGAGN 2280
Query: 543 APDLVQAGKDHFSNFGYEEGRSI 565
G D F +I
Sbjct: 2281 DQLYGGNGMDTFILGSGAGADTI 2303
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 55/349 (15%), Positives = 87/349 (24%), Gaps = 18/349 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
K + Y GDD +GG N + + G + N T+ T
Sbjct: 501 GNDNFKGNGGDDVFYGGAGDD----QALGGNDNDDLRGEDGNDKLNGEDGNDTLYGGTGE 556
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +VG +G+D + G N+ GND G +G D + + + +
Sbjct: 557 DQLVGGNGDDYLHGEDGNDKLSGEDGNDSLYGGTGEDQLL--GGNGDDDLRGEDGNDKLS 614
Query: 329 DANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
N H + E F D L+ + L D +
Sbjct: 615 GDNGHDSLYGGAGEDSLFGGSGNDDLRGEDGNDYLKGEDGNDTLYGGNHNDTLLAGTGED 674
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
+G DI Y Y G + + L
Sbjct: 675 LLHGEDGDDILHGEQGNDTLYGGNDQDQLHGGYNHDILYGEAGDDQLHGNEGNDVLYGNT 734
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
++ L + + G FD+ D L G D
Sbjct: 735 GNDQLYGNDGYDYLEGGD-NQDYLSGGY------GFDTLYGQAGNDQLYGNAGDDFLDGG 787
Query: 508 RH----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
H Y G L A ++ L G+D
Sbjct: 788 SHADQLYGGTGRDLLYGQSGNDFLNGEADNDVLDGGSGVDTLDGGTGED 836
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 72/474 (15%), Positives = 122/474 (25%), Gaps = 34/474 (7%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ DV G G ++ + G + +YG
Sbjct: 1336 DVIFGQTGEDTLDGGQGEDVLISGDGDDLLMGQAGHDILDAGAGNDSLSGGDDTDFLYGH 1395
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ D + D +G ++ ++G
Sbjct: 1396 QGEDTLDGGQGD---DHLEAGDGNDQLYGQTGDDLLDAGTGNDNLFGG----------TG 1442
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
Q + GDD L D +L G N + + G + + +
Sbjct: 1443 NDQLFGRLGDDFLDAGAGDDHLEAGAGDDSLYGQGGNDFLNGGDGHDRLEGGDGDDELIA 1502
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
I+ + G SG+D + G ++ +GND DG SG D +
Sbjct: 1503 EAGIDYLDGGSGDDSLSGGDDHDQLLGQAGNDTLDGGSGDDNLIGGDDQDQLLGQAGNDD 1562
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ ++ + + + L ++LI G D E+
Sbjct: 1563 LDGGSGDDLLLGGDGNDDLY-GQSGNDTLDGGAGQDKLYGDDGDDELIGQAGDDYLEAGD 1621
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
E D LY + DD N D A G + F L+
Sbjct: 1622 GNDLLSGGENND-----KLYGEAGDDTLNGGSGDDRLEAGE----GDDQLSGDAGFDYLD 1672
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL--GSYDDLRNVFGSD 502
++ L + + G D + L D L G+D
Sbjct: 1673 GGLGNDQLAGGDDNDRLYGRQGNDTLDGGAGVDYLNAGEGEDQILGGAGNDQLYADAGND 1732
Query: 503 R--GAAARHYITHGVKEGR--NPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G A Y+ G E D L ++ L D G+D
Sbjct: 1733 TLAGGADNDYLDGGAGEDLLSGDDGNDQLYGQQGNDTLEGGTGDDYLEGGDGED 1786
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 70/487 (14%), Positives = 126/487 (25%), Gaps = 23/487 (4%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYG-IGKGTILSHNALHEIGHA 131
+ D +I +G +++ + D YG G T+ I
Sbjct: 1147 VTDQGDADYIRGGDGDDTIHAGGGDDWVKGDSGYGDDLIYGDDGNDTLEGGAGEDFISGG 1206
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+G + +YG D + ++A+ G + +
Sbjct: 1207 IGSDRIFGDDEADQLYGDAGDDHIVGGTGDDQLDGGADNDYLEANEGNDRLLGQAGDDFL 1266
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLN 246
G G++ + + GDD L D L G +
Sbjct: 1267 SGGDGEDSLWGGDD----NDWLEGEAGDDYLAGEAGDDHLEGADGDDELYGQQGDDHLDG 1322
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + G + + I T +++ G G DV+I +++ +G+D+ D +G D+
Sbjct: 1323 GDGQDYLIGGDGDDVIFGQTGEDTLDGGQGEDVLISGDGDDLLMGQAGHDILDAGAGNDS 1382
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+Y + + L D +L+
Sbjct: 1383 L--SGGDDTDFLYGHQGEDTLDGGQGDDH--------LEAGDGNDQLYGQTGDDLLDAGT 1432
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
++L G D G D Y N F + R
Sbjct: 1433 GNDNLFGGTGNDQLFGRLGDDFLDAGAGDDHLEAGAGDDSLYGQGGNDFLNGGDGHDRLE 1492
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
G E L+ + + L L Q G D ++ D
Sbjct: 1493 GGDGDDELIAEAGIDYLDGGSGDDSLSGGDDHDQLLGQAGNDTLDGGSGDDNLIGGDDQD 1552
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
L N G + L+ A + L D +
Sbjct: 1553 QLL---GQAGNDDLDGGSGDDLLLGGDGNDDLYGQSGNDTLDGGAGQDKLYGDDGDDELI 1609
Query: 547 VQAGKDH 553
QAG D+
Sbjct: 1610 GQAGDDY 1616
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 71/485 (14%), Positives = 123/485 (25%), Gaps = 28/485 (5%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D + I N D D G I+ I G
Sbjct: 1083 DDQIIGDNQ--ANWITADKGDDTLDGQAGDDSLYGERGDDQIIGGLGQDRIFGNQGTDTI 1140
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G G + ++ + D+ +G ++ G
Sbjct: 1141 YGDLQGVTDQGDADYIRGGDGDDTIHAGGGDDWVKGDSGYGDDLIYGDDGNDTLEGGAGE 1200
Query: 198 PKGSLG---NNIYKIE--VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
S G + I+ + Q I GDD LD GG N E
Sbjct: 1201 DFISGGIGSDRIFGDDEADQLYGDAGDDHIVGGTGDDQLD----GGADNDYLEANEGNDR 1256
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + ++ +S+ G ND + G + ++ +G+D +G+ G D Y
Sbjct: 1257 LLGQAGDDFLSGGDGEDSLWGGDDNDWLEGEAGDDYLAGEAGDDHLEGADGDDEL-YGQQ 1315
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ + + + L ++ +L A ++ L
Sbjct: 1316 GDDHLDGGDGQDYLIGGDGDDVIFGQTGEDTLDGGQGEDVLISGDGDDLLMGQAGHDILD 1375
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D +G D G DD + Y G
Sbjct: 1376 AGAGNDSLSGGDDTDFLYGHQGEDTL-----DGGQGDDHLEAGDGNDQL----YGQTGDD 1426
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLG 490
L ++ L D G DH ++ D
Sbjct: 1427 LLDAGTGNDNLFGGTGNDQLFGRLGDDFLDAGAGDDHLEAGAGDDSLYGQGGNDFLNGGD 1486
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+D L G D A G+ +L H+ L+ + +G
Sbjct: 1487 GHDRLEGGDGDDELIAEA-----GIDYLDGGSGDDSLSGGDDHDQLLGQAGNDTLDGGSG 1541
Query: 551 KDHFS 555
D+
Sbjct: 1542 DDNLI 1546
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/296 (12%), Positives = 84/296 (28%), Gaps = 12/296 (4%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + D G G+ + + + G
Sbjct: 632 FGGSGNDDLRGEDGNDYLKGEDGNDTLYGGNHNDTLLAGTGEDLLHGEDGDDILHGEQGN 691
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
N ++G N + + ++ + G +
Sbjct: 692 DTLYGGNDQDQLHGGYNHDILYGEAGDDQLHGNEGNDVLYGNTGNDQLYGNDGY---DYL 748
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTES 249
G + Y + +Y + GDD LD L GG +
Sbjct: 749 EGGDNQDYLSGGYGFD-TLYGQAGNDQLYGNAGDDFLDGGSHADQLYGGTGRDLLYGQSG 807
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G N + + ++++ G +G D + G + ++ + ++G+DV +G G D +
Sbjct: 808 NDFLNGEADNDVLDGGSGVDTLDGGTGEDTLYGQTDDDFLYGNAGHDVLEGGDGND--YL 865
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEY 364
S ++ N +Y + + + + + L + + Y
Sbjct: 866 EGNSGDDILHGQANNDQLYGNQGNDELYGETGDDFLMGEAGDDLIHGGQDNDTVSY 921
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 73/255 (28%), Gaps = 10/255 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S I ++ +G+ D G ++ + + +G
Sbjct: 2060 GQSGIDILNGGSGHDYL-EGGLDNDQLSGDRGNDQLYGQQGDDSLEGNAGNDYLEGGVGN 2118
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G +YG D D + + + G + +
Sbjct: 2119 DTLAGDRGNDQLYGQDGDDILNGGTDDDYLDGGADNDQLLGGKGNDQLYGQAGDDLLDSG 2178
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTES 249
G G + +Y G + LD + GG
Sbjct: 2179 EGDDYLEGG----SGDDHLLGGKGDDQLYGQQGTNYLDGGAGHDYIEGGDGIDTLFGQSG 2234
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G + + + + + + G +GND + S +++ +GND G +G+DTF
Sbjct: 2235 DDYLIGGDGDDILDGGSGYDWLEGGAGNDQLYAGSGDDILDGGAGNDQLYGGNGMDTFIL 2294
Query: 310 YAPSYLYKIYRFENA 324
+ + I+ F
Sbjct: 2295 GSGAGADTIFNFTVG 2309
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 74/523 (14%), Positives = 129/523 (24%), Gaps = 44/523 (8%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ D N + D G ++ I
Sbjct: 853 HDVLEGGDGNDYLEGNSGDDILHGQANNDQLYGNQGNDELYGETGDDFLMGEAGDDLIHG 912
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
V N+Y + S + D+ + +
Sbjct: 913 GQDNDTVSYETSPNGVIVNINEYRDYHHNRSDRAAQEITDANPSEYYSDLEPDFTINSGT 972
Query: 191 VQKIYGAPKG---------SLGNNIYKIE---VQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
+G S ++I Q + I + G+D D
Sbjct: 973 AIDGFGTTDTLKNLEHIIGSEFDDILIGNYKDNQIQALAGDDLILSTAGNDQFDGGNGTD 1032
Query: 239 VKNY--------IDLNTESWSSIGGYEKNMTIAQH----TVIESVVGSSGNDVVIGNSAN 286
++ ++L T G + + IE+V+GS +D +IG++
Sbjct: 1033 TLSFRRDPGGVQVNLETGRVMDGWGDMDIIIPRPDNNSLSTIENVIGSRHDDQIIGDNQA 1092
Query: 287 NVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
N G+D DG +G D+ + +I+ + +Y + D
Sbjct: 1093 NWITADKGDDTLDGQAGDDSLYGERGDDQIIGGLGQDRIFGNQGTDTIYGDLQGVTDQG- 1151
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYED--LIQVIGQDVFESMKHFYEFGLSEGRDI 397
D + +R D ++ + Y D + G D E G D
Sbjct: 1152 DADYIRGGDGDDTIHAGGGDDWVKGDSGYGDDLIYGDDGNDTLEGGAGEDFISGGIGSDR 1211
Query: 398 TFDSY----LYLGSYDDLRNVFGS----DRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
F LY + DD D GA + + + A
Sbjct: 1212 IFGDDEADQLYGDAGDDHIVGGTGDDQLDGGADNDYLEANEGNDRLLGQAGDDFLSGGDG 1271
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
ED + D L D + + D Y +
Sbjct: 1272 EDSLWGGDDNDWLEGEAGDDYLAGEAGDDHLEGADGDD--ELYGQQGDDHLDGGDGQDYL 1329
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G L+ + LI+ D + QAG D
Sbjct: 1330 IGGDGDDVIFGQTGEDTLDGGQGEDVLISGDGDDLLMGQAGHD 1372
>gi|307151307|ref|YP_003886691.1| proprotein convertase P [Cyanothece sp. PCC 7822]
gi|306981535|gb|ADN13416.1| proprotein convertase P [Cyanothece sp. PCC 7822]
Length = 814
Score = 86.8 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 53/348 (15%), Positives = 103/348 (29%), Gaps = 15/348 (4%)
Query: 215 DSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
S + I S +D + + + SI G + ++ ++++
Sbjct: 275 GSHYDDIILGSADNDTILGSSSSYVPKGGIWNPPPSDDDSIDGGSGDDSLDGRYGNDTLI 334
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GNDV++GN+ +++ G+D +G +G DT Y + + +
Sbjct: 335 GGIGNDVLLGNAGDDILKGGVGDDTLNGGAGNDTVDYSDATDVVAVNLKTGLAT----GG 390
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D LS +E + + + L A + L +G D + + S
Sbjct: 391 AGNDSLSSIEAVIGSKFDDSLYGGNGDNTLNGGAGNDTLRGGLGNDYLDGERGHNTADYS 450
Query: 393 EGR-----DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
+ D++F D L N+ G+ + A
Sbjct: 451 DATAGVYVDLSFGWVSGGAGDDFLYNIQAVIGSKFNDTIYNDGLLDNTLIGGAGNDILDA 510
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSDRGA 505
S+ + + G D + V D+ Y + +
Sbjct: 511 SYN-WALVPPNNLLQGEAGNDTLIGGAGNDTLDGGVGTDTVSYAYVAAAVNVNLSTGTAT 569
Query: 506 AARHYITHGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQAGKD 552
+ EG +F +L ++ L D AG D
Sbjct: 570 GGDGTDSLWAIEGVIGSSFNDSLTGSMGNDTLNGGLGDDSLDGGAGTD 617
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 67/473 (14%), Positives = 120/473 (25%), Gaps = 63/473 (13%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ K T+ G+D +D + ++L T G N ++ + I
Sbjct: 347 GDDILKGGVGDDTLNGGAGNDTVDYSDAT-DVVAVNLKTG---LATGGAGNDSL---SSI 399
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV- 327
E+V+GS +D + G + +N +GND G G D + V
Sbjct: 400 EAVIGSKFDDSLYGGNGDNTLNGGAGNDTLRGGLGNDYLDGERGHNTADYSDATAGVYVD 459
Query: 328 ----YDANEHKQDFLSDVERLRFADQCIDSVN-VKQRSILEYTASYEDLIQVIG------ 376
+ + DFL +++ + + N + L A + L
Sbjct: 460 LSFGWVSGGAGDDFLYNIQAVIGSKFNDTIYNDGLLDNTLIGGAGNDILDASYNWALVPP 519
Query: 377 QDVFESMKHFYEFGLSEGRDIT-----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
++ + G D D+ Y + + +
Sbjct: 520 NNLLQGEAGNDTLIGGAGNDTLDGGVGTDTVSYAYVAAAVNVNLSTGTATGGDGTDSLWA 579
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
EG +F + D +N L D Y+ +
Sbjct: 580 IEGVIGSSFNDSLTGSMGNDTLNGGLGDDSLDGGA---------------GTDIASYVDA 624
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQAG 550
+ + + EG +F L ++ L+ + AG
Sbjct: 625 TAAVNVNLSTGTATGGDGTDSLWAIEGVIGSSFNDTLTGSTGNDLLLGGLGNDSLNGGAG 684
Query: 551 KDHFS----------------NFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
KD + G FN D L + S
Sbjct: 685 KDTLTGGEGDDLLIGGLGNDKLTGGTGADQFIFNSAS--EGIDTLSDFTVSQGDKIVVSA 742
Query: 595 ITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
G + IS Q+ + +D L D G G
Sbjct: 743 AGFGGSLIAGVPISATQWVLG-----TTATINGSQFFYDSSTGRLLFDLDGTG 790
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/306 (16%), Positives = 85/306 (27%), Gaps = 15/306 (4%)
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYNGGYPVYGVDNDYENDSF 158
I D G G T+ + LG L +N Y + SF
Sbjct: 403 IGSKFDDSLYGGNGDNTLNGGAGNDTLRGGLGNDYLDGERGHNTADYSDATAGVYVDLSF 462
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK-IYGAPKGSLGNNIYKI-----EVQ 212
+ A G + + + + G + + Y
Sbjct: 463 GWVSGGAGDDFLYNIQAVIGSKFNDTIYNDGLLDNTLIGGAGNDILDASYNWALVPPNNL 522
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV--IES 270
+ T+ G+D LD + +Y + ++ ++ IE
Sbjct: 523 LQGEAGNDTLIGGAGNDTLDGGVGTDTVSYAYVAAAVNVNLSTGTATGGDGTDSLWAIEG 582
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V+GSS ND + G+ N+ G+D DG +G D Y + + N
Sbjct: 583 VIGSSFNDSLTGSMGNDTLNGGLGDDSLDGGAGTDIASYVDATAAVNV----NLSTGTAT 638
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D L +E + + +L + L G+D +
Sbjct: 639 GGDGTDSLWAIEGVIGSSFNDTLTGSTGNDLLLGGLGNDSLNGGAGKDTLTGGEGDDLLI 698
Query: 391 LSEGRD 396
G D
Sbjct: 699 GGLGND 704
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 41/257 (15%), Positives = 77/257 (29%), Gaps = 22/257 (8%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S+I G N + + + G +G+D + G+S N+ GND +G +G+++ Y
Sbjct: 2 STIMGTPFNDILIGTGDPDFLYGLAGDDSIDGDSGNDTLNGGGGNDFLEGGAGINSADYS 61
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV-----------NVKQR 359
+ + + A D LS+++ + +
Sbjct: 62 DAAAAVTV----DLDAGSAAGGAGHDTLSNIQIVIGSAFNDSLYADLSVNNNTLVGGAGD 117
Query: 360 SIL---EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
L Y +S L +G D + + L G + + + + LR G
Sbjct: 118 DRLDLGYYNSSNNQLQGGVGNDTLIADCTYGNNDLDGGEGNDLLTADQVLNSNTLRGGSG 177
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIAS--HEDLINAFADAPDLVQVGKDHFSNFG 474
D A I + G + + + A + G D
Sbjct: 178 DDTLIANAGAINRPPRPGYGNNYLDGGDGNDRLMVGESFGGRGIATLIGGAGDDTLITAS 237
Query: 475 CEEGRF--VTFDSYLYL 489
+ FD Y
Sbjct: 238 GNDILDGGTGFDIVDYS 254
Score = 45.5 bits (106), Expect = 0.026, Method: Composition-based stats.
Identities = 57/422 (13%), Positives = 118/422 (27%), Gaps = 35/422 (8%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
P + ++ + ++ ++ G + G +E + + +
Sbjct: 6 GTPFNDILIGTGDPDFLYGLAGDDSIDGDSGNDTLNGGGGNDFLEGGAGINSADYSDAAA 65
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV---IG 282
LD G + L+ + ++ ++VG +G+D +
Sbjct: 66 AVTVDLDAGSAAGGAGHDTLSNIQIVIGSAFNDSLYADLSVNNNTLVGGAGDDRLDLGYY 125
Query: 283 NSANNVFFESSGNDV-----------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
NS+NN GND DG G D + +
Sbjct: 126 NSSNNQLQGGVGNDTLIADCTYGNNDLDGGEGNDLLTADQVLNSNTLRGGSGDDTLIANA 185
Query: 332 EHKQDFLS---DVERLRFADQCIDSV-----NVKQRSILEYTASYEDLIQVIGQDVFESM 383
L D + + + L A + LI G D+ +
Sbjct: 186 GAINRPPRPGYGNNYLDGGDGNDRLMVGESFGGRGIATLIGGAGDDTLITASGNDILDGG 245
Query: 384 KHFYEFGLSEGRDITFD--------SYLYLGSYDDLRNVFGSDRGA--AARHYITHGVKE 433
F S+G IT + + YDD+ + ++ Y+ G
Sbjct: 246 TGFDIVDYSQGAYITLNMAVTVTNVEKVIGSHYDDIILGSADNDTILGSSSSYVPKGGIW 305
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGS 491
P +++ + + L + + + +G D ++ V D+
Sbjct: 306 NPPPSDDDSIDGGSGDDSLDGRYGNDTLIGGIGNDVLLGNAGDDILKGGVGDDTLNGGAG 365
Query: 492 YDDLRNVFGSDRGAA-ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
D + +D A + + G + + +A+ + L D AG
Sbjct: 366 NDTVDYSDATDVVAVNLKTGLATGGAGNDSLSSIEAVIGSKFDDSLYGGNGDNTLNGGAG 425
Query: 551 KD 552
D
Sbjct: 426 ND 427
Score = 40.2 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 80/300 (26%), Gaps = 27/300 (9%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ ++ I D G+G T+ + L +G ++
Sbjct: 520 NNLLQGEAGNDTLIGGAGNDTLDGGVGTDTVSYAYVAAAVNVNLSTGTATGGDGTDSLWA 579
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
++ + + S + DI + A +L
Sbjct: 580 IEGVIGSSFNDSLTGSMGNDTLNGGLGDDSLDGGAGT-DIASYVDATAAVNVNLSTGTAT 638
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I+ + S +D L G N +
Sbjct: 639 GGDGTDSLWAIEGVIGSSFNDTLT----------------------GSTGNDLLLGGLGN 676
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS----YLYKIYRFENA 324
+S+ G +G D + G +++ GND G +G D F + + S L +
Sbjct: 677 DSLNGGAGKDTLTGGEGDDLLIGGLGNDKLTGGTGADQFIFNSASEGIDTLSDFTVSQGD 736
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
IV A ++ V + + +++ L + G + + +
Sbjct: 737 KIVVSAAGFGGSLIAGVPISATQWVLGTTATINGSQFFYDSSTGRLLFDLDGTGIKAATQ 796
>gi|114328203|ref|YP_745360.1| glycosyltransferase [Granulibacter bethesdensis CGDNIH1]
gi|114316377|gb|ABI62437.1| glycosyltransferase [Granulibacter bethesdensis CGDNIH1]
Length = 990
Score = 86.8 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 73/233 (31%), Gaps = 12/233 (5%)
Query: 381 ESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNP 437
+ H+ + G G FD Y+ + D+RN HY G K
Sbjct: 46 DGWHHYRDEGHQSGFCPNALFDEQWYVNANPDVRNAIDEGVFTCGYDHYFRVGHKIRSPN 105
Query: 438 DAFKALEYIASHEDLINAFADAP-DLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYDD 494
F Y ++ DL G DH+ G EGR D L+
Sbjct: 106 WLFDEAWYQRTYPDLFRFDGPVGRGDFVNGFDHYLREGAAEGRQPGLFLDPDLWNMFRPA 165
Query: 495 LRNVFGSDRGAAARHYITHGV-KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
DR + G R+ F A Y+ ++ + A + + H
Sbjct: 166 HVPPKKEDRSLIEDVFDLAGQGHYPRSSWYFDAEWYLQNYPAVAEEIAAGRWV--SPLAH 223
Query: 554 FS--NFGYEEGRSITFNPDLYLTSYDDLWNVFGSD-RSAAAQHYITHGMKEGR 603
+ + + + F+ + Y + DL H++ G++EGR
Sbjct: 224 YLGNDTPHAFNPNPFFSEEEYRSGNADLDGFLQGGRFRNGYMHFLEFGIQEGR 276
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 72/220 (32%), Gaps = 13/220 (5%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLR 412
N A+ + + H++ G R FD Y +Y DL
Sbjct: 63 NALFDEQWYVNANPDVRNAIDEGVFTCGYDHYFRVGHKI-RSPNWLFDEAWYQRTYPDLF 121
Query: 413 NVFG----SDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQVGK 467
G D HY+ G EGR P F + + + L++
Sbjct: 122 RFDGPVGRGDFVNGFDHYLREGAAEGRQPGLFLDPDLWNMFRPAHVPPKKEDRSLIEDVF 181
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDAF-K 525
D + G FD+ YL +Y + + R + HY+ + NP+ F
Sbjct: 182 D-LAGQGHYPRSSWYFDAEWYLQNYPAVAEEIAAGRWVSPLAHYLGNDTPHAFNPNPFFS 240
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
EY + + DL + G HF FG +EGR
Sbjct: 241 EEEYRSGNADLDGFL--QGGRFRNGYMHFLEFGIQEGRPP 278
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 67/181 (37%), Gaps = 26/181 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ Y Y + HY G + G P+A F Y+ ++ D+ NA
Sbjct: 33 FDADWYTVKYG---------KPDGWHHYRDEGHQSGFCPNALFDEQWYVNANPDVRNAI- 82
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFG----SDRSAAAQHYI 595
+ G DH+ G++ RS F+ Y +Y DL+ G D HY+
Sbjct: 83 -DEGVFTCGYDHYFRVGHK-IRSPNWLFDEAWYQRTYPDLFRFDGPVGRGDFVNGFDHYL 140
Query: 596 THGMKEGRALGI-SGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDL 654
G EGR G+ ++ + K D SL D D G G+Y S
Sbjct: 141 REGAAEGRQPGLFLDPDLWNMFRPAHVPPKKEDRSLIEDV------FDLAGQGHYPRSSW 194
Query: 655 Y 655
Y
Sbjct: 195 Y 195
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/255 (20%), Positives = 81/255 (31%), Gaps = 56/255 (21%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y Y + HY G + G P+A F Y+ ++ D+ NA
Sbjct: 33 FDADWYTVKY---------GKPDGWHHYRDEGHQSGFCPNALFDEQWYVNANPDVRNAI- 82
Query: 458 DAPDLVQVGKDHFSNFGCE-EGRFVTFDSYLYLGSYDDL----RNVFGSDRGAAARHYIT 512
+ G DH+ G + FD Y +Y DL V D HY+
Sbjct: 83 -DEGVFTCGYDHYFRVGHKIRSPNWLFDEAWYQRTYPDLFRFDGPVGRGDFVNGFDHYLR 141
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFA--------DAPDLVQ-----AGKDHFSNFGY 559
G EGR P F DL N F + L++ AG+ H+ +
Sbjct: 142 EGAAEGRQPGLFLD-------PDLWNMFRPAHVPPKKEDRSLIEDVFDLAGQGHYPRSSW 194
Query: 560 EEGRSITFNPDLYLTSYDDLWNVFGSDR-SAAAQHYI------------THGMKEGRALG 606
F+ + YL +Y + + R + HY+ +E R+
Sbjct: 195 ------YFDAEWYLQNYPAVAEEIAAGRWVSPLAHYLGNDTPHAFNPNPFFSEEEYRSGN 248
Query: 607 ISGMQFKSVMNLSEK 621
F
Sbjct: 249 ADLDGFLQGGRFRNG 263
>gi|325139862|gb|EGC62394.1| iron-regulated protein FrpA [Neisseria meningitidis CU385]
Length = 984
Score = 86.8 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 70/497 (14%), Positives = 132/497 (26%), Gaps = 71/497 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 420 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGR 479
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 480 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 539
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 540 VLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 595
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 596 IYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 655
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 656 SDTYVFGKGFGQDAVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 715
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 716 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGD 775
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D + + Y +G
Sbjct: 776 DYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDALNGG 826
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ L ++ LI + G D + EG ++ D
Sbjct: 827 EGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG---EGFGQDTVYNYHVDKNSDTM- 882
Query: 498 VFGSDRGAAARHYITHG 514
AA H+I G
Sbjct: 883 -HFKGFKAADVHFIRSG 898
>gi|302337197|ref|YP_003802403.1| glycosyl transferase family 2 [Spirochaeta smaragdinae DSM 11293]
gi|301634382|gb|ADK79809.1| glycosyl transferase family 2 [Spirochaeta smaragdinae DSM 11293]
Length = 1100
Score = 86.8 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 18/128 (14%)
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDL 536
R FD YL DL RH++ G K RNP+AF + Y ++ D+
Sbjct: 47 TRSAIFDENYYLRKNPDLY----YTTANLMRHFLLTGYKAYRNPNAFFDSKYYEETYPDV 102
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
P + H+ +G EEG++ F+ YL SY D+ HY
Sbjct: 103 KK-VGMNPVI------HYIMYGVEEGKNPHPEFDTLFYLRSYPDV----AEKGVNPLGHY 151
Query: 595 ITHGMKEG 602
I G ++G
Sbjct: 152 IKIGWRKG 159
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 18/133 (13%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLI 453
R FD YL DL RH++ G K RNP+ F + Y ++ D+
Sbjct: 48 RSAIFDENYYLRKNPDLY----YTTANLMRHFLLTGYKAYRNPNAFFDSKYYEETYPDVK 103
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
+ H+ +G EEG FD+ YL SY D+ + HYI
Sbjct: 104 KVGMNPVI-------HYIMYGVEEGKNPHPEFDTLFYLRSYPDVAEKGVN----PLGHYI 152
Query: 512 THGVKEGRNPDAF 524
G ++G P+ F
Sbjct: 153 KIGWRKGNRPNPF 165
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 49/133 (36%), Gaps = 21/133 (15%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
F Y+ + DL HF G + R FDS Y +Y D
Sbjct: 49 SAIFDENYYLRKNPDL-------YYTTANLMRHFLLTGYKAYRNPNAFFDSKYYEETYPD 101
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDH 553
++ V + HYI +GV+EG+NP F L Y+ S+ D+ P H
Sbjct: 102 VKKVGMN----PVIHYIMYGVEEGKNPHPEFDTLFYLRSYPDVAEK-GVNPLG------H 150
Query: 554 FSNFGYEEGRSIT 566
+ G+ +G
Sbjct: 151 YIKIGWRKGNRPN 163
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 13/83 (15%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F Y+ + DL HF GY+ R+ F+ Y +Y D+
Sbjct: 52 FDENYYLRKNPDLY-------YTTANLMRHFLLTGYKAYRNPNAFFDSKYYEETYPDVKK 104
Query: 582 VFGSDRSAAAQHYITHGMKEGRA 604
V HYI +G++EG+
Sbjct: 105 V----GMNPVIHYIMYGVEEGKN 123
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 46/129 (35%), Gaps = 18/129 (13%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
Y DL M+HF G R+ FDS Y +Y D++ V
Sbjct: 50 AIFDENYYLRKNPDLYYT----TANLMRHFLLTGYKAYRNPNAFFDSKYYEETYPDVKKV 105
Query: 415 FGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
HYI +GV+EG+NP F L Y+ S+ D+ + H+
Sbjct: 106 ----GMNPVIHYIMYGVEEGKNPHPEFDTLFYLRSYPDVAEKGVNP-------LGHYIKI 154
Query: 474 GCEEGRFVT 482
G +G
Sbjct: 155 GWRKGNRPN 163
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 10/135 (7%)
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ L + F+ + + + + Y +
Sbjct: 39 YLREKKLLTRSAIFDENYYLRKNPDLYYTTANLMRHFLLTGYKAYRNPNAFFDSKYYEET 98
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARH 425
Y D ++ +G + H+ +G+ EG++ FD+ YL SY D+ H
Sbjct: 99 YPD-VKKVGMNPVI---HYIMYGVEEGKNPHPEFDTLFYLRSYPDVA----EKGVNPLGH 150
Query: 426 YITHGVKEGRNPDAF 440
YI G ++G P+ F
Sbjct: 151 YIKIGWRKGNRPNPF 165
>gi|254500886|ref|ZP_05113037.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
DFL-11]
gi|222436957|gb|EEE43636.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
DFL-11]
Length = 1702
Score = 86.8 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
A A ++ ++HF+ FG +EGR FD+ YLG D+ + HY
Sbjct: 2 AAAIEAGVIGSAEEHFNLFGFQEGRDPNAHFDTSFYLGQNPDVAAAGVN----PFDHYNL 57
Query: 513 HGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT----- 566
G EGR+P++ F + Y + D+ A + +HF NFG EGRS
Sbjct: 58 LGESEGRSPNSLFDPVFYAEQYPDVAAA-------GVSLFEHFINFGASEGRSPNASIAS 110
Query: 567 -----FNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGRALGISGM 610
F+ + YL + D+ + A A +H+ G KE R+ +
Sbjct: 111 QLESGFDTEAYLAANPDVAAAIENGLFASAYEHWGLFGFKEDRSGAQNTN 160
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 61/160 (38%), Gaps = 25/160 (15%)
Query: 379 VFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+ + +HF FG EGRD FD+ YLG D+ HY G EGR+
Sbjct: 10 IGSAEEHFNLFGFQEGRDPNAHFDTSFYLGQNPDVAAA----GVNPFDHYNLLGESEGRS 65
Query: 437 P-DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV----------TFDS 485
P F + Y + D+ A +HF NFG EGR FD+
Sbjct: 66 PNSLFDPVFYAEQYPDVAAAGVS-------LFEHFINFGASEGRSPNASIASQLESGFDT 118
Query: 486 YLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDAF 524
YL + D+ + +A H+ G KE R+
Sbjct: 119 EAYLAANPDVAAAIENGLFASAYEHWGLFGFKEDRSGAQN 158
Score = 37.8 bits (86), Expect = 6.0, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 46/157 (29%), Gaps = 15/157 (9%)
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ F+ + + + ++ + + + Y Y
Sbjct: 20 FGFQEGRDPNAHFDTSFYLGQNPDVAAAGVNPFDHYNLLGESEGRSPNSLFDPVFYAEQY 79
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDIT----------FDSYLYLGSYDDLRNVFGSD 418
D+ +HF FG SEGR FD+ YL + D+ +
Sbjct: 80 PDVAAA----GVSLFEHFINFGASEGRSPNASIASQLESGFDTEAYLAANPDVAAAIENG 135
Query: 419 -RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
+A H+ G KE R+ + I+ +
Sbjct: 136 LFASAYEHWGLFGFKEDRSGAQNTNGDVISIGDGAPG 172
>gi|294676791|ref|YP_003577406.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294475611|gb|ADE84999.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 767
Score = 86.8 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/341 (12%), Positives = 98/341 (28%), Gaps = 48/341 (14%)
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G+ G + + + L M + G ND ++ D++
Sbjct: 133 GVNDGMYGADVSTGPLYSTLASMSFDPDHVNTIQGGAYNDSIAAGAGNDTIATEGGADTI 192
Query: 173 MDASFGYCATPMVSDI---VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
+ T + Y +G Y TI+ G+D
Sbjct: 193 DGGAGNDSITFGTGGDCVHGGLGDDY--IDDYVGTTGYVWNDTLFGDAGNDTIWAGSGND 250
Query: 230 LLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
L+D +++G N L +I G + ++ ++ ++G +G D + G
Sbjct: 251 LVDGGADNDSILGEDGNDTLLGGTGADTIQGCAGDDSLDGGAGVDLLLGGTGQDTIHGGD 310
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--------------------ENA 324
++ +SGND+ G + D ++ + ++
Sbjct: 311 GADLLAGNSGNDLIYGEADADRIYFESDWGNDTVFGGGTTTAGGVDHDVLDFSHDTLGGV 370
Query: 325 IIVYDANEHKQDF-------LSDVERLRFAD-----------QCIDSVNVKQRSILEYTA 366
++ + +E ++E + ++ + L +
Sbjct: 371 LVTFTGSEDGTATQGANSVSFDNIEGITGSNLADTVNAAGDASGLRIDGAGGDDRLIGGS 430
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ L+ GQD +++G F + L
Sbjct: 431 GADVLLGGSGQDTLSGGAGADTIVMADGTGHDFITDFDLSR 471
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 57/475 (12%), Positives = 108/475 (22%), Gaps = 19/475 (4%)
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
S + F W Y + T + + +
Sbjct: 5 TVQGLYGAQFQVEGGGSTLWPGAQFKVDPAWDYSTSRRTFVFT--DDDTSLSGDSNFMAD 62
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
G V + L S Y + D S M + + I
Sbjct: 63 EYGNDSTQSVAVYDAGGTLLYSGRVYVEWSSTFTDPSGTVV--HMYTLEIGGTIIGEVAT 120
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
L + D + + L SI N
Sbjct: 121 NPLTPGVTYHVSGVNDGMYGADVSTGPLYSTLASMSFDPDHVNTIQGGAYNDSIAAGAGN 180
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TIA +++ G +GND + + + G+D D D + ++
Sbjct: 181 DTIATEGGADTIDGGAGNDSITFGTGGDCVHGGLGDDYID-----DYVGTTGYVWNDTLF 235
Query: 320 RFENAIIVYDANEHK-QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++ + + D +D + + D + ++ A + L G D
Sbjct: 236 GDAGNDTIWAGSGNDLVDGGADNDSILGEDGNDTLLGGTGADTIQGCAGDDSLDGGAGVD 295
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ +G D+ + D + +DR + V G
Sbjct: 296 LLLGGTGQDTIHGGDGADLLAGNSG----NDLIYGEADADRIYFESDWGNDTVFGGGTTT 351
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
A D + + G + + + + D N
Sbjct: 352 AGGVDH---DVLDFSHDTLGGVLVTFTGSEDGTATQGANSVSFDNIEGITGSNLADTVNA 408
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
G G G L + + L ++ G H
Sbjct: 409 AGDASGLRID--GAGGDDRLIGGSGADVLLGGSGQDTLSGGAGADTIVMADGTGH 461
>gi|75906805|ref|YP_321101.1| Integrins subunit alpha [Anabaena variabilis ATCC 29413]
gi|75700530|gb|ABA20206.1| Integrins alpha chain [Anabaena variabilis ATCC 29413]
Length = 1019
Score = 86.4 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/303 (15%), Positives = 88/303 (29%), Gaps = 25/303 (8%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A+ GA + I + + DL G +I
Sbjct: 677 AILIQGGANT----DTITFNLTNPSNQLASIPGTTITNIETFDLRTFVGTVTFI--GGSG 730
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+I G + + +++ G +G+D +IG N++ SG + G +G D ++
Sbjct: 731 NDTIYGGAGDDNLNGDAGDDNLNGGAGDDTLIGGDGNDILTGGSGTNTLTGGAGNDRYYI 790
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRS 360
S I N ++VE L ++ Q +
Sbjct: 791 DNAS--DVITEDINGGQDEVFATVSYTLAANVEALTLKGTAVNGTGNASNNNIRGNNQDN 848
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFG 416
+LE ++L G DV G D+ L+ G D FG
Sbjct: 849 LLEGLDGNDNLTGNAGNDVLIGGNGNDTLNGGIGNDVLIGGAGSDRLFGGDGADTF-GFG 907
Query: 417 SDRGAAARHYITHGVKE---GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ ++ + + + G + + A + + F+ + V D
Sbjct: 908 TGNAFSSAGFGIDTIADFAVGVDAIELDKASFSALTSVVGDGFSVGSEFASVSNDTLVAT 967
Query: 474 GCE 476
Sbjct: 968 SNA 970
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 47/417 (11%), Positives = 105/417 (25%), Gaps = 37/417 (8%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN-- 295
+ +L+ E+ ++ + I + + + ++ DV G++ + F + N
Sbjct: 605 TATDTTNLSVETTFNLSVGLPDNIINGNGSNNTFIATTAKDVFTGDAGYDNFITNFANFQ 664
Query: 296 --DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD--QCI 351
D FDG G D + I A+ ++++E +
Sbjct: 665 QNDSFDGGDGRDAILIQGGANTDTITFNLTNPSNQLASIPGT-TITNIETFDLRTFVGTV 723
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ + A ++L G D +G DI + +
Sbjct: 724 TFIGGSGNDTIYGGAGDDNLNGDAGDDNLNGGAGDDTLIGGDGNDIL--TGGSGTNTLTG 781
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
A IT + G++ +A++ + + A + ++
Sbjct: 782 GAGNDRYYIDNASDVITEDINGGQDEVFATVSYTLAANVEALTLKGTAVNGTGNASNNNI 841
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
++ D L G + L
Sbjct: 842 RGNNQDNLLEGLDGNDNLTGN--------------------AGNDVLIGGNGNDTLNGGI 881
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA 591
++ LI G D FG+ G N D F A
Sbjct: 882 GNDVLIGGAGSDRLFGGDGAD---TFGFGTG-----NAFSSAGFGIDTIADFAVGVDAIE 933
Query: 592 QHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
+ + + ++ ++ + + L+ + G
Sbjct: 934 LDKASFSALTSVVGDGFSVGSEFASVSNDTLVATSNALIVYSLGSGRLFYNQNGTAA 990
>gi|83953143|ref|ZP_00961865.1| hypothetical protein NAS141_12581 [Sulfitobacter sp. NAS-14.1]
gi|83842111|gb|EAP81279.1| hypothetical protein NAS141_12581 [Sulfitobacter sp. NAS-14.1]
Length = 829
Score = 86.4 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 80/247 (32%), Gaps = 17/247 (6%)
Query: 200 GSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ G+ I+ + S ++ G D L GG N + G
Sbjct: 576 GTEGDQIWGGIGWDTLRGSDGDDALWGGDGYDAL----GGGDGNDTLTGNNGADRLYGDR 631
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + +S+ G +G D + G++ + SGND G++G D F S +
Sbjct: 632 DDDHLIGGLNADSLWGGAGKDRLEGSAGADQLLGGSGNDQLFGNAGAD--FLQGDSGNDR 689
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ N V + D LS + + +++ A ++ L G
Sbjct: 690 LAGGINNDTVNGGS--GNDTLSG------DNGADQLIGGDGDDLIKGNAGHDTLDGGAGN 741
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR-HYITHGVKEGRN 436
DV F G+D + + ++G + ++ H EG
Sbjct: 742 DVLSGGIGADRFIYGAGQDTILSFQNEIDTLSLDSALWGGGSLSMSQLQSFAHKGAEGHI 801
Query: 437 PDAFKAL 443
F +
Sbjct: 802 VLDFGSG 808
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/253 (12%), Positives = 76/253 (30%), Gaps = 8/253 (3%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+L + + T + G + I+ + ++G+ GND ++G + + + +
Sbjct: 509 SLPTAPTPLVLVGTPQSDVLEGDAADDHISGRADGDRLIGAGGNDTILGEAGADTIYGNG 568
Query: 294 GNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
G+D+ +G + D ++ + + + + ++ +
Sbjct: 569 GSDLIEGGTEGDQIWGGIGWDTLRGSDGDDALWGGDGYDALGGGDGNDTLTGNNGADRLY 628
Query: 347 ADQCIDS-VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
D+ D + L A + L G D + + G D
Sbjct: 629 GDRDDDHLIGGLNADSLWGGAGKDRLEGSAGADQLLGGSGNDQLFGNAGADFLQGDSGND 688
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ N + +G + D ++ A H+ L + +
Sbjct: 689 RLAGGINNDTVNGGSGNDTLSGDNGADQLIGGDGDDLIKGNAGHDTLDGGAGNDVLSGGI 748
Query: 466 GKDHFSNFGCEEG 478
G D F ++
Sbjct: 749 GADRFIYGAGQDT 761
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 77/270 (28%), Gaps = 11/270 (4%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ + I D G TI + I G G
Sbjct: 529 EGDAADDHISGRADGDRLIGAGGNDTILGEAGADTIYGNGGSDLIEG----GTEGDQIWG 584
Query: 144 YPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+ + D L Y D G + + G
Sbjct: 585 GIGWDTLRGSDGDDALWGGDGYDALGGGDGNDTLTGNNGADRLYGDRDDDHLIGGLNADS 644
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + + S + G+D L L G N + ++ G
Sbjct: 645 LWGGAG-KDRLEGSAGADQLLGGSGNDQLFGNAGADFLQGDSGNDRLAGGINNDTVNGGS 703
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N T++ + ++G G+D++ GN+ ++ +GNDV G G D F Y A
Sbjct: 704 GNDTLSGDNGADQLIGGDGDDLIKGNAGHDTLDGGAGNDVLSGGIGADRFIYGAGQDTIL 763
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFA 347
++ E + D+ LS + FA
Sbjct: 764 SFQNEIDTLSLDSALWGGGSLSMSQLQSFA 793
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/301 (13%), Positives = 81/301 (26%), Gaps = 41/301 (13%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG+ +DV+ G++A++ + D G+ G DT + IY + ++
Sbjct: 519 LVGTPQSDVLEGDAADDHISGRADGDRLIGAGGNDTIL--GEAGADTIYGNGGSDLIEGG 576
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
E + ++ L G D + G
Sbjct: 577 TEG--------------------------DQIWGGIGWDTLRGSDGDDALWGGDGYDALG 610
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
+G D + Y D + A + G L + ++
Sbjct: 611 GGDGNDTLTGNNGADRLYGDRDDDHLIGGLNADSLWGGAGKDRLEGSAGADQLLGGSGND 670
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
L G D + + + G + + G
Sbjct: 671 QLFGNAGADFLQGDSGNDRLAGGINNDTVNGGSGNDTLSGDNGADQLIGGD--------- 721
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
G + L+ A ++ L + AG+D +F E +++ +
Sbjct: 722 ---GDDLIKGNAGHDTLDGGAGNDVLSGGIGADRFIYGAGQDTILSF-QNEIDTLSLDSA 777
Query: 571 L 571
L
Sbjct: 778 L 778
Score = 42.5 bits (98), Expect = 0.21, Method: Composition-based stats.
Identities = 38/330 (11%), Positives = 75/330 (22%), Gaps = 54/330 (16%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-------------- 322
D + G + +++ + G D+ G SG D F A I F+
Sbjct: 386 ADHISGRAGDDILRDGGGRDLLTGGSGRDLFVLSADGEADTIADFDSAQDSIDLSAWPFL 445
Query: 323 --NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA-------------- 366
+ + + + ERL S++ L+
Sbjct: 446 RHGSQLTISSTKDGAVLSFGEERLEIKTSNGQSLSEDDVQALDLIGQSRFMPDWTLPEEP 505
Query: 367 ------------------SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ L D + G D Y
Sbjct: 506 DTPSLPTAPTPLVLVGTPQSDVLEGDAADDHISGRADGDRLIGAGGNDTILGEAGADTIY 565
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
+ + + + G R D AL ++ L + G D
Sbjct: 566 GNGGSDLIEGGTEGDQIWGGIGWDTLRGSDGDDALWGGDGYDALGGGDGNDTLTGNNGAD 625
Query: 469 HFSNFGCEEGRFVTFDSY--LYLGSYDDLRNVFGSD----RGAAARHYITHGVKEGRNPD 522
++ ++ D L G+D + + G +
Sbjct: 626 RLYGDRDDDHLIGGLNADSLWGGAGKDRLEGSAGADQLLGGSGNDQLFGNAGADFLQGDS 685
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKD 552
L +++ + + G D
Sbjct: 686 GNDRLAGGINNDTVNGGSGNDTLSGDNGAD 715
>gi|251825702|gb|ACT20901.1| protease [Pseudomonas aeruginosa]
Length = 129
Score = 86.4 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 42/123 (34%), Gaps = 10/123 (8%)
Query: 53 EVARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINF- 104
A+ +L W+ V ++ F + N + P + +
Sbjct: 7 SQAKLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPDALKGQSWYL 66
Query: 105 -DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSV 162
+ + G HEIGH LGL HPG YN G D Y D+ SV
Sbjct: 67 INSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAEDTRAYSV 126
Query: 163 MSY 165
MSY
Sbjct: 127 MSY 129
>gi|163733385|ref|ZP_02140828.1| iron-regulated protein FrpC, putative [Roseobacter litoralis Och
149]
gi|161393173|gb|EDQ17499.1| iron-regulated protein FrpC, putative [Roseobacter litoralis Och
149]
Length = 902
Score = 86.4 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/296 (15%), Positives = 83/296 (28%), Gaps = 18/296 (6%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ + G + +D GG + + + G N T+ +
Sbjct: 492 ENIISGNGNDALSGTAGANRMD----GGGGDDLITGLGGNDFLLGGSGNDTLEGGDGNDR 547
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G +GND + G N+V GND G +G D + + + + ++
Sbjct: 548 ILGVTGNDTLRGELGNDVLNGGDGNDDMIGGNGDDIMY--GGAGNDTMDGGDGNDLLIGN 605
Query: 331 NEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ D + R + L G D+ +
Sbjct: 606 DGDDIMDGGLGNDNFRGGTGVDVIDGGVGDDRAFGGDGNDTLRGGQGNDLMDGSAGDDVI 665
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
++G DI + D L G D+ G R D L ++
Sbjct: 666 EGNDGDDIL----VGRIGNDTLVGGTGQDQLR-----GGGGNDVLRGGDDNDRLFGGSND 716
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDR 503
+ L D DH + F FD + D L G+D
Sbjct: 717 DTLFGGDGDDFMQGNQQDDHLFGEAGSDRLFGGDGFDFLFGGAANDTLLGGRGNDV 772
>gi|220920528|ref|YP_002495829.1| glycerophosphoryl diester phosphodiesterase [Methylobacterium
nodulans ORS 2060]
gi|219945134|gb|ACL55526.1| glycerophosphoryl diester phosphodiesterase [Methylobacterium
nodulans ORS 2060]
Length = 2668
Score = 86.4 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/333 (15%), Positives = 81/333 (24%), Gaps = 31/333 (9%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D + N E S+ G N TI +++ G +G D + G + N+
Sbjct: 2342 DVRVIAPGEAAPGNLQLSGGEGDDSLTGSAGNDTIRGGAGNDTLKGFAGADQLFGQNGND 2401
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ +GND G G D+ A L +
Sbjct: 2402 TVWGGAGNDFVSGGFGADSVSGDAGDDLVFSDDDD------------------------- 2436
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ + + + G D EG D +
Sbjct: 2437 ---DVADGGAGNDRVYGGTGADLVFGAAGDDQVYGEWGNDFVSGGEGHDFVSGGFGNDEV 2493
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
D N G + A + + + L G
Sbjct: 2494 NGDAGNDLLFGDDGDDAVSGGEGDDRVYGGTGNDLVSGEAGADQVFGEQGEDVLLGGAGS 2553
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-PDAFKA 526
D+ S + F + L L + G A G R+
Sbjct: 2554 DYLSGGAGADQLFGGEGADL-LFGNAGADALTGGLGSDAFAFGRGDGQDVIRDFVTGGAE 2612
Query: 527 LEYIASHEDLINAFAD-APDLVQAGKDHFSNFG 558
+ IA + +FA L Q G D +G
Sbjct: 2613 RDVIAFNNGAFGSFAAVQAALRQEGSDAVIAYG 2645
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/301 (14%), Positives = 80/301 (26%), Gaps = 20/301 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + T R + F AD G T+ + G
Sbjct: 2359 SGGEGDDSLTGSAGNDTIRGGAGNDTLKGFAGADQLFGQNGNDTVWGGAGNDFVSGGFGA 2418
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G V+ D+D D + Y + D FG V +
Sbjct: 2419 DSVSGDAGDDLVFSDDDDDVADGGAGNDRVYGG---TGADLVFGAAGDDQVYGEWGNDFV 2475
Query: 195 YGAPKGSLGNNIYKIEVQQKDS--------PFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
G + + + D+ + GDD + GG N +
Sbjct: 2476 SGGEGHDFVSGGFGNDEVNGDAGNDLLFGDDGDDAVSGGEGDDRV----YGGTGNDLVSG 2531
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + + + + G +G D + G ++ F ++G D G G D
Sbjct: 2532 EAGADQVFGEQGEDVLLGGAGSDYLSGGAGADQLFGGEGADLLFGNAGADALTGGLGSDA 2591
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F + I F V E ++ FA +++ Y
Sbjct: 2592 FAFGRGDGQDVIRDF-----VTGGAERDVIAFNNGAFGSFAAVQAALRQEGSDAVIAYGT 2646
Query: 367 S 367
Sbjct: 2647 G 2647
>gi|325144028|gb|EGC66338.1| iron-regulated protein FrpA [Neisseria meningitidis M01-240013]
Length = 1505
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 76/504 (15%), Positives = 142/504 (28%), Gaps = 87/504 (17%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS--------HNALHEIG 129
+ + + I D G G T + + ++
Sbjct: 936 NGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTQDTVYNYD 995
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYEND---------SFLTSVMSYFMPQDSMMDASFGYC 180
+A G + G + E + S +V SYF S
Sbjct: 996 YATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIH 1055
Query: 181 ATPM-VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
V D+ V+++ + + G++ Y+ +Y + GDDLL+
Sbjct: 1056 FDNGKVLDVATVKEL--VQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN---- 1109
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N + ++ G E N + + + + G GND + G N+ +GND
Sbjct: 1110 GDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGND 1169
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFE---------------------------------- 322
+G SG DT+ + +Y ++
Sbjct: 1170 YLEGGSGSDTYVFGKGFGQDAVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAK 1229
Query: 323 ---NAIIVYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYED 370
+ V ++ ++ + F + + V + L S
Sbjct: 1230 DGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNT 1289
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L +G D G D +Y G+ +D N + Y +G
Sbjct: 1290 LNGGLGDDYLYGADGDDLLNGDAGND-----SIYSGNGNDTLNGGEGNDAL----YGYNG 1340
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+ L ++ LI + G D + FG G+ ++ ++
Sbjct: 1341 NDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV-FGKGFGQDTVYN--YHVD 1397
Query: 491 SYDDLRNVFGSDRGAAARHYITHG 514
D AA H+I G
Sbjct: 1398 KNSDTM--HFKGFKAADVHFIRSG 1419
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 77/519 (14%), Positives = 138/519 (26%), Gaps = 57/519 (10%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 738 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGR 797
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 798 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 857
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 858 VLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 913
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 914 IYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 973
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT+ + N + +RF D +
Sbjct: 974 SDTYVFGKGFGQDTQDTVYNYDYATGRKD----------IIRFTDGITADML-----TFT 1018
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
++ + G +F G +Y + D V
Sbjct: 1019 REGNHLLIKAKDGSGQVTVQSYFQNDGSG--------AYRIDEIHFDNGKVLDVATVKEL 1070
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
T G + L + L A D G
Sbjct: 1071 VQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLNGDAG----------------- 1113
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
+ +Y G+ +D N + Y +G + L ++ LI +
Sbjct: 1114 NDSIYSGNGNDTLNGGEGNDAL----YGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGND 1169
Query: 544 PDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNV 582
+G D + FG G+ +N D Y T D+
Sbjct: 1170 YLEGGSGSDTYV-FGKGFGQDAVYNYD-YATGRKDIIRF 1206
>gi|75906806|ref|YP_321102.1| putative Ig [Anabaena variabilis ATCC 29413]
gi|75700531|gb|ABA20207.1| putative Ig [Anabaena variabilis ATCC 29413]
Length = 1055
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/473 (11%), Positives = 122/473 (25%), Gaps = 36/473 (7%)
Query: 31 KPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE---ETSIHSDIKFISSNNG 87
+++ + IT + N + ++ + + F + +D +
Sbjct: 534 NATAFSSNTQTVGITINSVNDAPIVANSISNQTAITGTAFNFQIAANTFADADSGDTLTY 593
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA--LHEIGHALGLMHPGSYNGGYP 145
+ + S + L + + P
Sbjct: 594 SATRSDGSPLPSWLSFDADTGRFTGTPTTDNLGSISLRVTATDTTNLSVNTIFNLEIRRP 653
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV-------AVQKIYGAP 198
++ N++ + + D A +DI+ + G
Sbjct: 654 DNIINGTANNNTIIATSAKDIFDGGDGGDIFITNIANLSQNDILNGGNGQDTIIIQGGIN 713
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ I + + DL G + + G
Sbjct: 714 T----DTISFDLSNVNNQLASILGTTITNVETFDLRSFAGTVTF--TGGSGNDVVYGGVG 767
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N T+ +++ G +G+D +IG N++ SG + G +G D ++ S I
Sbjct: 768 NDTLTGGAGDDNLNGGAGDDTLIGGDGNDILTGGSGTNTLTGGAGNDRYYIDNAS--DVI 825
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ---------RSILEYTASYE 369
A ++VE L I +IL +
Sbjct: 826 QEGAGAGQDEVFATVSYTLAANVEALTLRGTAIQGTGNSSNNNIRGNNANNILSGEDGND 885
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARH 425
+L G DV + G D L+ G+ D + +
Sbjct: 886 NLTGNAGNDVLIGGRGNDTLNGGIGNDELIGGAGSDRLFGGAGADYFSFGSQGNPFNSGD 945
Query: 426 YITHGVKE---GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ + + G + + + A + N F+ + + V D +
Sbjct: 946 FGIDTIADFAVGVDDIKLDKVSFSALTSVVGNGFSVSSEFASVSNDTLAATSN 998
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/526 (10%), Positives = 120/526 (22%), Gaps = 48/526 (9%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
N + ++ S S T + +
Sbjct: 526 GVNASVNGNATAFSSNTQTVGITINSVNDAPIVANSISNQTAITGTAFNFQIAANTF--A 583
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ + + SP + T I L + +
Sbjct: 584 DADSGDTLTYSATRSDGSPLPSWLSFDADTGRFTGTPTTDNLGSISLRVTATDTTNLSVN 643
Query: 259 NMTIAQHTVIESVV-GSSGNDVVIGNSA-------------NNVFFESSGNDVFDGSSGL 304
+ + ++++ G++ N+ +I SA S ND+ +G +G
Sbjct: 644 TIFNLEIRRPDNIINGTANNNTIIATSAKDIFDGGDGGDIFITNIANLSQNDILNGGNGQ 703
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD--QCIDSVNVKQRSIL 362
DT I + + A+ +++VE + ++
Sbjct: 704 DTIIIQGGINTDTISFDLSNVNNQLASILGT-TITNVETFDLRSFAGTVTFTGGSGNDVV 762
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L G D +G DI + +
Sbjct: 763 YGGVGNDTLTGGAGDDNLNGGAGDDTLIGGDGNDIL--TGGSGTNTLTGGAGNDRYYIDN 820
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
A I G G++ +A++ + + A ++
Sbjct: 821 ASDVIQEGAGAGQDEVFATVSYTLAANVEALTLRGTAIQGTGNSSNNNIRGNNANNILSG 880
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
D L G L +++LI
Sbjct: 881 EDGNDNLTGN--------------------AGNDVLIGGRGNDTLNGGIGNDELIGGAGS 920
Query: 543 APDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
AG D + +FG + + + + D F ++
Sbjct: 921 DRLFGGAGAD-YFSFGSQGNPFNSGDFGI------DTIADFAVGVDDIKLDKVSFSALTS 973
Query: 603 RALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
+ + ++ ++ + + L+ + G
Sbjct: 974 VVGNGFSVSSEFASVSNDTLAATSNGLIVYSLGSGRLFYNQNGSAA 1019
>gi|326319474|ref|YP_004237146.1| Ig family protein [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323376310|gb|ADX48579.1| Ig family protein [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 3020
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 72/548 (13%), Positives = 122/548 (22%), Gaps = 87/548 (15%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI---GHALGLMHPG 138
+ G + DV G G I I GL G
Sbjct: 896 DPDDAGSSDWVDGGAGNDEIRGGMGGDVLLGGTGDDGIAGMEGDDLIIGGEGNDGLYGDG 955
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
Y+ + + + +D ++ D +IYG
Sbjct: 956 VYDPQATEFIDGKIGAYNHRGNDTIYGGAGKDYIVGGVGSDQLFGGEGD----DQIYGDN 1011
Query: 199 KG---SLGNNIYKIE---------------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
G + GNNI I + G+DL+
Sbjct: 1012 DGPFVATGNNITWIPGQYHGDDTIDGGDGNDGILGGGGSDVLLGGAGNDLI--HGDQSDV 1069
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+D I G E N + ++V+G +G+D + G N++ + +G D G
Sbjct: 1070 ILLDAQYHGDDRIDGGEGNDILYGDGGADTVIGGAGDDYLNGGEGNDILWGGAGQDRLYG 1129
Query: 301 SSGLDTFFYYAP-------------------------SYLYKIYRFENAIIVYDANEHKQ 335
G D + + S R IV
Sbjct: 1130 GLGDDVYRFEKGDIEQGRKEIIVDEGGTDRIEFTAGLSAQDLYVRRVGGEIVLSMAGGGS 1189
Query: 336 DFLSD----VERLRFADQC---------------------------IDSVNVKQRSILEY 364
+ +E ++F+D K L
Sbjct: 1190 LGVQGDIRVIESVQFSDGTQWSSADLVREATRTSDGGDTVQTVVADSAVDGGKGDDSLTG 1249
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ L+ G D + G D D + G R
Sbjct: 1250 DDWKDTLLGGAGDDTLQGKGGDDVLDGGAGNDKIMGGSG----RDTVLFGRGDGRDDYYA 1305
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
G + AL + + H + R D
Sbjct: 1306 GAAAQGSGDVLRLKEGVALSDLVLLRAQDDLVVRIAGGTDQLIAHSAFSTQALDRLEFAD 1365
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
+ + L + Y+ G ++ A ++ + D
Sbjct: 1366 GSVVALADLKLASGQSQATEGNDVIYLPAGGDTVNALGGNDTVQGGAGNDTIDGGEGDDL 1425
Query: 545 DLVQAGKD 552
AG D
Sbjct: 1426 LRGDAGND 1433
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 41/129 (31%), Gaps = 3/129 (2%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+S ND + G S N+ +G D G +G DT+ K+ NA
Sbjct: 2773 ITGTSRNDTLTGTSGNDTIDGLAGADTMSGLAGDDTYIVDNT--GDKVVESANAGTDTVM 2830
Query: 331 NEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ S+VE L I+ + L A L G D +
Sbjct: 2831 SSVTYTLPSNVENLVLTGSSAINGTGNALDNRLTGNAGANVLTGGAGADYLDGGAGADTL 2890
Query: 390 GLSEGRDIT 398
G D
Sbjct: 2891 AGGLGNDTY 2899
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 60/457 (13%), Positives = 111/457 (24%), Gaps = 54/457 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
SD+ + + + AD G G + + G
Sbjct: 1065 DQSDVILLDAQYHGDDRIDGGEGNDILYGDGGADTVIGGAGDDYLNGGEGNDILWGGAGQ 1124
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G D E V + V +
Sbjct: 1125 DRLYGGLGDDVYRFEKGDIEQGRKEIIVDEGGTDRIEFTAGLSAQDLYVRRVGGEIVLSM 1184
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + +I IE Q + D + V+ + + S++
Sbjct: 1185 AGGGSLGVQGDIRVIESVQFSDGTQWSSADLVREATRTSDGGDTVQTVV-----ADSAVD 1239
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + ++ ++++G +G+D + G ++V +GND G SG DT +
Sbjct: 1240 GGKGDDSLTGDDWKDTLLGGAGDDTLQGKGGDDVLDGGAGNDKIMGGSGRDTVLFGRGDG 1299
Query: 315 LYKIYRFENA------------------------IIVYDANEHKQDFL--------SDVE 342
Y A + D L ++
Sbjct: 1300 RDDYYAGAAAQGSGDVLRLKEGVALSDLVLLRAQDDLVVRIAGGTDQLIAHSAFSTQALD 1359
Query: 343 RLRFADQCID-----------SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
RL FAD + S + ++ A + + + G D +
Sbjct: 1360 RLEFADGSVVALADLKLASGQSQATEGNDVIYLPAGGDTVNALGGNDTVQGGAGNDTIDG 1419
Query: 392 SEGRDIT-----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
EG D+ D + G DR + G L
Sbjct: 1420 GEGDDLLRGDAGNDVLTDFRGDNTFDGGDGDDRITGTGSSVYAGAGNDTVDVPDATLMLG 1479
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ ++ A + G R + F
Sbjct: 1480 TGDDTVVLRKASGAPNRYARLID-GDLGATAQRTIRF 1515
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/477 (12%), Positives = 121/477 (25%), Gaps = 47/477 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + N+G + + + G + + +G A
Sbjct: 1001 GEGDDQIYGDNDGPFVATGNNITWIPGQYHGDDTIDGGDGNDGILGGGGSDVLLGGA--G 1058
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ + + +D + + D D G ++ +
Sbjct: 1059 NDLIHGDQSDVILLDAQYHGDDRIDGGEGNDILYGDGGADTVIGGAGDDYLNGGEGNDIL 1118
Query: 195 YGAPKGS-----LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+G LG+++Y+ E + + I D GG D ++ T ++
Sbjct: 1119 WGGAGQDRLYGGLGDDVYRFEKGDIEQGRKEIIVDEGGTDRIEFTAGLSAQDLYVRRVGG 1178
Query: 250 -------------------------------WSSIG-------GYEKNMTIAQHTVIESV 271
WSS + T+ +V
Sbjct: 1179 EIVLSMAGGGSLGVQGDIRVIESVQFSDGTQWSSADLVREATRTSDGGDTVQTVVADSAV 1238
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G G+D + G+ + +G+D G G D + KI V
Sbjct: 1239 DGGKGDDSLTGDDWKDTLLGGAGDDTLQGKGGDD--VLDGGAGNDKIMGGSGRDTVLFGR 1296
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+D + + + S L + +DL+ I + + H
Sbjct: 1297 GDGRDDYYAGAAAQGSGDVLRLKEGVALSDLVLLRAQDDLVVRIAGGTDQLIAHSAFSTQ 1356
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+ R D + + L + Y+ G ++ A ++
Sbjct: 1357 ALDRLEFADGSVVALADLKLASGQSQATEGNDVIYLPAGGDTVNALGGNDTVQGGAGNDT 1416
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ D G D ++F + G+ + G+D
Sbjct: 1417 IDGGEGDDLLRGDAGNDVLTDFRGDNTFDGGDGDDRITGTGSSVYAGAGNDTVDVPD 1473
Score = 58.3 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 49/330 (14%), Positives = 87/330 (26%), Gaps = 31/330 (9%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G + I L S +N + V+ +GND+V+ ++V G+
Sbjct: 805 TGAGDDRIFLGRTYESPEYQGAENWGPKAGEDEDHVIAGAGNDLVLTGYGSDVIEGGDGD 864
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D + YY+ + +V + + A
Sbjct: 865 DRLYSAM----IGYYSQVNADGSAVSRHGAVVQNHDPDD------------AGSSDWVDG 908
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ + L+ G D M+ EG D + +Y + +
Sbjct: 909 GAGNDEIRGGMGGDVLLGGTGDDGIAGMEGDDLIIGGEGNDGLYGDGVYDPQATEFIDGK 968
Query: 416 -------GSDRGA--AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA----PDL 462
G+D A + YI GV + + ++ A + P
Sbjct: 969 IGAYNHRGNDTIYGGAGKDYIVGGVGSDQLFGGEGDDQIYGDNDGPFVATGNNITWIPGQ 1028
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
G + L G+ +DL + SD Y HG +
Sbjct: 1029 YHGDDTIDGGDGNDGILGGGGSDVLLGGAGNDLIHGDQSDVILLDAQY--HGDDRIDGGE 1086
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKD 552
L + +I D G D
Sbjct: 1087 GNDILYGDGGADTVIGGAGDDYLNGGEGND 1116
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 53/190 (27%), Gaps = 17/190 (8%)
Query: 196 GAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGG-------------- 238
GA G+ N+ T+ GDD + G
Sbjct: 2771 GAITGTSRNDTLTGTSGNDTIDGLAGADTMSGLAGDDTYIVDNTGDKVVESANAGTDTVM 2830
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
L + + + + + + + G++G +V+ G + + +G D
Sbjct: 2831 SSVTYTLPSNVENLVLTGSSAINGTGNALDNRLTGNAGANVLTGGAGADYLDGGAGADTL 2890
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G G DT++ + + D + D S R + ++ +
Sbjct: 2891 AGGLGNDTYWLARGHGTDTVQENDTTSGNLDTAKFAGDVSSRQLWFRKSGNNLEVSVIGT 2950
Query: 359 RSILEYTASY 368
T Y
Sbjct: 2951 SDKFLVTDWY 2960
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/308 (12%), Positives = 76/308 (24%), Gaps = 33/308 (10%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
T + DV G T + I
Sbjct: 1404 GNDTVQGGAGNDTIDGGEGDDLLRGDAGNDVLTDFRGDNTFDGGDGDDRITGT------- 1456
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM---VSDIVA-VQKI 194
G VY + D ++M ++ + G D+ A Q+
Sbjct: 1457 ----GSSVYAGAGNDTVDVPDATLMLGTGDDTVVLRKASGAPNRYARLIDGDLGATAQRT 1512
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL---------LDLTLIGGVK---NY 242
G +++ V + ++ + D +D + +
Sbjct: 1513 IRFASGIAPSDVAFSSVSTQGRKDLRVTWPGATADRPQALHVEGFMDFSQAARAGFRFVF 1572
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
D WS + + + +++ G+ +D + G + N+ +GNDV DG +
Sbjct: 1573 EDAPDTVWSFDDVFRR--ANSGTPGDDALRGTDADDTLSGLAGNDTIDGLAGNDVLDGGA 1630
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT + + + + D L +
Sbjct: 1631 GFDTLRGGTGNDVLRAGEGGPGGTDVLYGDDGDDTL----YAAVGGASTEMRGGAGADTF 1686
Query: 363 EYTASYED 370
A
Sbjct: 1687 HVGAGGGT 1694
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 43/298 (14%), Positives = 81/298 (27%), Gaps = 14/298 (4%)
Query: 43 DITELNPNAQEVARWALGE-----WSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSR 97
+ + A+ R+ + WS D F + + T +
Sbjct: 1556 GFMDFSQAARAGFRFVFEDAPDTVWS--FDDVFRRANSGTPGDDALRGTDADDTLSGLAG 1613
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
DV G G T+ + G PG + Y G D Y
Sbjct: 1614 NDTIDGLAGNDVLDGGAGFDTLRGGTGNDVLRAGEGG--PGGTDVLYGDDGDDTLYAAVG 1671
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
++ M D+ + G T M D VA + + G+ +
Sbjct: 1672 GASTEMRGGAGADTFHVGAGGGTHTIMRDDAVAQDVLEFDASIAPGDVRVRRSGDGAALQ 1731
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+ + ++ + L + + G + + +++G
Sbjct: 1732 VKDPVTGAVRTTVMIVGLFATAQP----GGVAKVRFAGDPSTVWTVEDLRQRALIGEKTA 1787
Query: 278 DVVIGNS-ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
D + G A+++ +GNDV G G D + Y I +
Sbjct: 1788 DELAGFDFADDLLTGGAGNDVLAGQGGNDVYLYRPGDGRDVITETSGNDTLRFGAGIS 1845
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 16/133 (12%), Positives = 27/133 (20%), Gaps = 6/133 (4%)
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F + ++ F++ ++ D L D + ++ A
Sbjct: 1568 FRFVFEDAPDTVWSFDDVFRRANSGTPGDDALRG------TDADDTLSGLAGNDTIDGLA 1621
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L G D EG D D L G
Sbjct: 1622 GNDVLDGGAGFDTLRGGTGNDVLRAGEGGPGGTDVLYGDDGDDTLYAAVGGASTEMRGGA 1681
Query: 427 ITHGVKEGRNPDA 439
G
Sbjct: 1682 GADTFHVGAGGGT 1694
Score = 45.2 bits (105), Expect = 0.033, Method: Composition-based stats.
Identities = 80/593 (13%), Positives = 151/593 (25%), Gaps = 94/593 (15%)
Query: 29 RYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGY 88
D+ T + E Q++ R S + E ++ + NG
Sbjct: 1929 STSDDIYTVDHPDDSVAEGANQGQDIIRS---SVSYTLPDNVENLTLTGTLDIAGIGNGV 1985
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
++ + D G G + N ++ +
Sbjct: 1986 GNVIVGNAGNNVLNGMGGIDRLEGGAGDDVYVDLNYNPYNSDQDQIVEQAGGGYDTLLLD 2045
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDAS--FGYCATPMVSD---IVAVQKIYGAPKGSLG 203
+ D+ V+ + + FG+ + D + G + ++
Sbjct: 2046 AQSRRLPDNVEKLVLVDWSNSVRRFSTNPFFGFQHSYRAYDAQSDDTRVWLGGNSQDNVI 2105
Query: 204 NNI---------------YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ Y V T+ G +D + G K E
Sbjct: 2106 DATNEGRISQAMMRDRSSYFGGVVLDGGEGNDTMI-GGAEDNFYVVDSLGDKVIETGGKE 2164
Query: 249 SWSSIGGYEKNMTIAQHTVIESV-VGSSGNDVVIGNSANNVFFE--SSGNDVFDGSSGLD 305
S +I ++ +A T IE++ + S G+ N ++ +V G G D
Sbjct: 2165 SQDTIVSSRISVDLAGQTGIENIELLGSSEISATGDDNANTIRGSRNTARNVLAGKGGDD 2224
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQ------------DFLSDVERLRFAD----- 348
T++ + + ++ D Q D ++VE +
Sbjct: 2225 TYYVGLNDVVVETAGGGTDRVILDVTAMGQAAWRSSGKVFHLDDYANVENIAANGKLRGQ 2284
Query: 349 ---QCIDSVNVKQRSILEYT--------------------------------ASYEDLIQ 373
Q I V + + + ++L
Sbjct: 2285 DAAQGIHLVGNAGNNTISGSFQDDIVDGGDGDDVVEDQYAAIVPGDGPGYVPMDQDELKG 2344
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYL---GSYDDLR----NVFGSDRGAAARHY 426
G D S G D+ +YL G +D R R
Sbjct: 2345 GAGNDRLVSYAGLDTMDGGAGDDVLVGGDIYLFGRGDGNDTIESWTGSVNGGRTQTLRFK 2404
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD-- 484
G ++ AL+ + + +G +D
Sbjct: 2405 SGVGAQDVLLQRDGDALKVSLRGS-QDSITVRSFYSQNASATGVRRIEFADGTAWGYDTL 2463
Query: 485 ---SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR--NPDAFKALEYIAS 532
+ + ++ + D AAA V G +PDA AL Y AS
Sbjct: 2464 VRRADPTVVNHAPVLASPLPDVRAAAGTAFQMSVPAGTFTDPDANDALGYRAS 2516
Score = 42.9 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 42/319 (13%), Positives = 83/319 (26%), Gaps = 22/319 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+D V + + ++ D DV G T+ + L
Sbjct: 1794 DFADDLLTGGAGNDVLAGQGGNDVYLYRPGDGRDVITETSGNDTLRFGAGISAADVRLVR 1853
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ D+ + ++ G T +D
Sbjct: 1854 TSSTPADWRGESTYYKAT---DTLVVALPDGGQVWIPGFFTEAGALETFEFADGT----R 1906
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ A + + IY D ++ I + ++
Sbjct: 1907 WNAQDIQARITDVRGTANAQQGSTSDDIYTVDHPDDSVAEGANQGQDII--RSSVSYTLP 1964
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY----- 309
+N+T+ I + GN V++GN+ NNV G D +G +G D +
Sbjct: 1965 DNVENLTLTGTLDIAGIGNGVGN-VIVGNAGNNVLNGMGGIDRLEGGAGDDVYVDLNYNP 2023
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL------- 362
Y + + + + +VE+L D
Sbjct: 2024 YNSDQDQIVEQAGGGYDTLLLDAQSRRLPDNVEKLVLVDWSNSVRRFSTNPFFGFQHSYR 2083
Query: 363 EYTASYEDLIQVIGQDVFE 381
Y A +D +G + +
Sbjct: 2084 AYDAQSDDTRVWLGGNSQD 2102
Score = 41.7 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 24/64 (37%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G D + G + +++ G+D +G SG D + + + A ++
Sbjct: 603 TLTGRRMADRLYGGAGDDILDGGEGSDYLEGGSGRDVYRFNGKFGHDVVRDEGGAGVLEF 662
Query: 330 ANEH 333
Sbjct: 663 DGAA 666
Score = 40.9 bits (94), Expect = 0.79, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 23/63 (36%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G + + + G + + +G+D+ DG G D + +Y+ +V D
Sbjct: 597 GDAAGNTLTGRRMADRLYGGAGDDILDGGEGSDYLEGGSGRDVYRFNGKFGHDVVRDEGG 656
Query: 333 HKQ 335
Sbjct: 657 AGV 659
>gi|284054806|ref|ZP_06385016.1| lipolytic enzyme, G-D-S-L [Arthrospira platensis str. Paraca]
Length = 300
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 7/129 (5%)
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHED 535
FD YL D+++ A H+ +G EGRNP+ F + Y+A + D
Sbjct: 3 TLETLFDEGFYLAQNQDVQDAIADGLFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPD 62
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQH 593
+ + + A HF N G + RS F+P YL + + A +H
Sbjct: 63 IQSEVEEGITTAAA---HFVNIGQTDNRSPNPFFDPVFYLQQNPTVSQGVANGEFTAFEH 119
Query: 594 YITHGMKEG 602
++ G EG
Sbjct: 120 FLKIGQFEG 128
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 10/173 (5%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
+ FD YL D+++ A H+ +G EGRNP+ F + Y+A + D+
Sbjct: 5 ETLFDEGFYLAQNQDVQDAIADGLFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPDIQ 64
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
+ + + HF N G + R FD YL + + A H++
Sbjct: 65 SEVEEG---ITTAAAHFVNIGQTDNRSPNPFFDPVFYLQQNPTVSQGVANGEFTAFEHFL 121
Query: 512 THGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G EG +P +F Y + D + D ++ + +HF FG E GR
Sbjct: 122 KIGQFEGLDPSESFNTEFYRDRNFDAVEGIEDE--IIGSIFEHFYRFGLELGR 172
Score = 77.9 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 72/198 (36%), Gaps = 15/198 (7%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
+ + + + +HF +G EGR+ FDS YL D+++
Sbjct: 6 TLFDEGFYLAQNQDVQDAIADGLFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPDIQS 65
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
AA H++ G + R+P+ F + Y+ + + A+ +HF
Sbjct: 66 EVEEGITTAAAHFVNIGQTDNRSPNPFFDPVFYLQQNPTVSQGVANGEFT---AFEHFLK 122
Query: 473 FGCEEGRFV--TFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDAFKALEY 529
G EG +F++ Y D + G+ H+ G++ GR + +
Sbjct: 123 IGQFEGLDPSESFNTEFYRDRNFDAVEGIEDEIIGSIFEHFYRFGLELGRLGAPPQLM-- 180
Query: 530 IASHEDLINAFADAPDLV 547
+DL NA A L
Sbjct: 181 ----DDLSNAIALDTLLG 194
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
F Y+A ++D+ +A AD L + +HFS +G EGR+ F+ + YL D+
Sbjct: 6 TLFDEGFYLAQNQDVQDAIAD--GLFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPDI 63
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRA 604
+ + AA H++ G + R+
Sbjct: 64 QSEVEEGITTAAAHFVNIGQTDNRS 88
>gi|166365599|ref|YP_001657872.1| hypothetical protein MAE_28580 [Microcystis aeruginosa NIES-843]
gi|166087972|dbj|BAG02680.1| hypothetical protein MAE_28580 [Microcystis aeruginosa NIES-843]
Length = 1059
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 65/496 (13%), Positives = 122/496 (24%), Gaps = 42/496 (8%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ S D D G I N + G + +
Sbjct: 165 DFTGTNGNDNITGTSASDNIFGLDGNDTLSGLGGSDNIYGGNGNDSLNGGDG-SDYFTND 223
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G + + S S + G +D + + KG+
Sbjct: 224 AGNDTINGGSGTDRYEVDYSSASSGLTMTYNTTTGSGTITVGTETDTFTSIESFNGFKGT 283
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
N++ + + + + G+D + + I G + N
Sbjct: 284 EYNDVIFGGTESEFYYYYGALSGGSGNDTIS-------------GNAGFDEIYGEDGNDV 330
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G SGND + G++ ++ F GND +G SG+D + +
Sbjct: 331 LNGGADNDQLYGGSGNDSLNGDAGDDYFTNEDGNDTINGGSGIDRYEADYSYASSGLTMT 390
Query: 322 ENAIIVYDANEHK--QDFLSDVERLRFADQC----------------IDSVNVKQRSILE 363
N D + +E +
Sbjct: 391 YNTATGSGTITVGTETDTFTSIESFEGFKGTEYNDVIFGGTENEYYEGGLKGGGGNDTIS 450
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
A ++ + G DV + G D+ D N + GA +
Sbjct: 451 GNAGFDRIYGEDGNDVLNGGVGNDQLYGGNGNDLLNGDSGDDYFTGDEGNNDTINGGAGS 510
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
Y + + + Y + I + + F F + V F
Sbjct: 511 DSYH----ADYSYGSSGLTMTYDTAGSGTITVGTETDTFTS--IESFDGFKGTDYNDVIF 564
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA-- 541
Y N S + Y +G D + L ++ L
Sbjct: 565 GGTAVEQLYGREGNDTISGNAGSDYIYGENGNDVLNGGDGYDDLYGGNGNDTLQGTDGGT 624
Query: 542 --DAPDLVQAGKDHFS 555
+ +G D F
Sbjct: 625 GESDYLVGGSGSDRFI 640
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 54/348 (15%), Positives = 89/348 (25%), Gaps = 32/348 (9%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G N T + +I G + N T++ +++ G +GND + G ++ F +GN
Sbjct: 167 TGTNGNDNITGTSASDNIFGLDGNDTLSGLGGSDNIYGGNGNDSLNGGDGSDYFTNDAGN 226
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ--DFLSDVERLRFADQC--- 350
D +G SG D + S + N D + +E
Sbjct: 227 DTINGGSGTDRYEVDYSSASSGLTMTYNTTTGSGTITVGTETDTFTSIESFNGFKGTEYN 286
Query: 351 ---------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ A ++++ G DV + G
Sbjct: 287 DVIFGGTESEFYYYYGALSGGSGNDTISGNAGFDEIYGEDGNDVLNGGADNDQLYGGSGN 346
Query: 396 DITFDSYLYLG-----SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
D D + G DR A Y + G+ N + +
Sbjct: 347 DSLNGDAGDDYFTNEDGNDTINGGSGIDRYEADYSYASSGLTMTYNTATGSGTITVGTET 406
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
D + + G E + Y G N S R Y
Sbjct: 407 DTFTSIESFEGFKGTEYNDVIFGGTE-------NEYYEGGLKGGGGNDTISGNAGFDRIY 459
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
G L ++ L D G + N G
Sbjct: 460 GEDGNDVLNGGVGNDQLYGGNGNDLLNGDSGDDYFTGDEGNNDTINGG 507
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 46/258 (17%), Positives = 83/258 (32%), Gaps = 35/258 (13%)
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
G +N+Y + + ++ D +G +++ V ++YG L N
Sbjct: 430 GTENEYYEGGLKGGGGNDTISGNAGFDRIYGEDGNDVLNGGVGNDQLYGGNGNDLLNGDS 489
Query: 208 KIEVQQKDSPFIQTIYDSGGDD---------------LLDLTLIG----GVKNYIDLNTE 248
+ D TI G D D G G + + E
Sbjct: 490 GDDYFTGDEGNNDTINGGAGSDSYHADYSYGSSGLTMTYDTAGSGTITVGTETDTFTSIE 549
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN---------SANNVFFESSGNDVFD 299
S+ G + N I T +E + G GND + GN + N+V G D
Sbjct: 550 SFDGFKGTDYNDVIFGGTAVEQLYGREGNDTISGNAGSDYIYGENGNDVLNGGDGYDDLY 609
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G +G DT + + + + L+D + + D +
Sbjct: 610 GGNGNDTL-------QGTDGGTGESDYLVGGSGSDRFILADTTKTFYDDGLTATEGTSDY 662
Query: 360 SILEYTASYEDLIQVIGQ 377
+ + ++ +D IQ+ G
Sbjct: 663 AEIAGFSTIDDTIQLRGS 680
Score = 41.7 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 52/214 (24%), Gaps = 18/214 (8%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+ + + + L + G D +G D +
Sbjct: 165 DFTGTNGNDNITGTSASDNIFGLDGNDTLSGLGGSDNIYGGNGNDSLNGGDGSDYFTNDA 224
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
D + G+DR + G+ N +
Sbjct: 225 G----NDTINGGSGTDRYEVDYSSASSGLTMTYNTTTGS--------GTITVGTETDTFT 272
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
+ F + F +S Y Y L G+D + G E D
Sbjct: 273 SIESFNGFKGTEYNDVIFGGTESEFYYY-YGALSGGSGNDTIS-----GNAGFDEIYGED 326
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
L A ++ L + AG D+F+N
Sbjct: 327 GNDVLNGGADNDQLYGGSGNDSLNGDAGDDYFTN 360
Score = 41.3 bits (95), Expect = 0.49, Method: Composition-based stats.
Identities = 24/254 (9%), Positives = 53/254 (20%), Gaps = 9/254 (3%)
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ LD A + + + + + + +
Sbjct: 132 GNSLDVATLDALRAENDQTTIIVNGEIIQVEQADFTGTNGNDNITGTSASDNIFGLDGND 191
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
L +++ G D F G D D +
Sbjct: 192 TLSGLGGSDNIYGGNGNDSLNGGDGSDYFTNDAGNDTINGGSGTDRYEVDYSSASSGLTM 251
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ + G D F ++E + ++ G
Sbjct: 252 TYNTTTGSGTITVGTETDTFTSIESFNGFKGTEYNDVIFGGTESEFYYYYGALSGGSGND 311
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
+ + Y + N + + Y G +L A + N
Sbjct: 312 TISGNAGFDEIYGEDGNDVLNGGADNDQLYGGSG---------NDSLNGDAGDDYFTNED 362
Query: 541 ADAPDLVQAGKDHF 554
+ +G D +
Sbjct: 363 GNDTINGGSGIDRY 376
>gi|170739968|ref|YP_001768623.1| metallophosphoesterase [Methylobacterium sp. 4-46]
gi|168194242|gb|ACA16189.1| metallophosphoesterase [Methylobacterium sp. 4-46]
Length = 2105
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/370 (15%), Positives = 93/370 (25%), Gaps = 46/370 (12%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+N+ + + ++P +T+ GDD L GG + ++ G N +A
Sbjct: 1714 DNVRAVALGTGEAPVGKTLVGGAGDDALT----GGAGADSIMGGGGNDTLSGLAGNDVLA 1769
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ ++G G+D + G ++ + G D G +G D +
Sbjct: 1770 GEQGDDQLIGGDGDDSLDGGDGADLLCGNDGADGLWGGAGKDQLY-------------GG 1816
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
A D L E L + L G D
Sbjct: 1817 AGADTLDGGDGADTLFGNE------GADWMAGQAGDDALVGGDGSDSLFGGAGNDWLVGE 1870
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH-----YITHGVKEGRNPD 438
EG D F G D D + G
Sbjct: 1871 AGDDALVAGEGSDSLFG-----GDGADWLAGEAGDDALVGGEGTDSLFGGDGNDWLVGEG 1925
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
L ++ L Q G D ++ + G + V
Sbjct: 1926 GDDLLIGGEGNDSLFGGAGADWLEGQAGDDALVGGEGDDVLRGGEGNDWLDGEAGNDVLV 1985
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
G+ G R D L A + L D AG D +
Sbjct: 1986 GGA------------GNDGLRGGDGADWLVGEAGSDTLSGGAGDDVLFGGAGSDT-IQYA 2032
Query: 559 YEEGRSITFN 568
+GR + +
Sbjct: 2033 SGDGRDVVRD 2042
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 55/395 (13%), Positives = 98/395 (24%), Gaps = 31/395 (7%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + + V +++VG +G+D + G + + GND G +G D
Sbjct: 1707 GGGGVTYDNVRAVALGTGEAPVGKTLVGGAGDDALTGGAGADSIMGGGGNDTLSGLAGND 1766
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
++ + D + L D + L
Sbjct: 1767 VLAGEQGDDQ----------LIGGDGDDSLDGGDGADLLCGNDGADGLWGGAGKDQLYGG 1816
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRD----ITFDSYLYLGSYDDLRNVFGSDRGA 421
A + L G D + G D L+ G+ +D D
Sbjct: 1817 AGADTLDGGDGADTLFGNEGADWMAGQAGDDALVGGDGSDSLFGGAGNDWLVGEAGDDAL 1876
Query: 422 AARH-----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
A + G AL + L + + + G D
Sbjct: 1877 VAGEGSDSLFGGDGADWLAGEAGDDALVGGEGTDSLFGGDGNDWLVGEGGDDLLIGGEGN 1936
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ F + G D V G G L A ++ L
Sbjct: 1937 DSLFGGAGADWLEGQAGDDALVGGEGDDVLR---GGEGNDWLDGEAGNDVLVGGAGNDGL 1993
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
+ +AG D + G G + F D D + ++T
Sbjct: 1994 RGGDGADWLVGEAGSD--TLSGGA-GDDVLFGGAG-----SDTIQYASGDGRDVVRDFVT 2045
Query: 597 HGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLS 631
G E + F S + ++ +
Sbjct: 2046 GG-AERDVVAFGPGLFGSFAAVQAATQQVGADVVI 2079
Score = 84.1 bits (206), Expect = 8e-14, Method: Composition-based stats.
Identities = 38/268 (14%), Positives = 70/268 (26%), Gaps = 19/268 (7%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D AD G + + G G + G D
Sbjct: 1815 GGAGADTLDGGDGADTLFGNEGADWMAGQAGDDALVGGDGSDSLFGGAGNDWLVGEAGDD 1874
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI-----YK 208
+ G + A+ G G+
Sbjct: 1875 AL---------VAGEGSDSLFGGDGADWLAGEAGDDALVGGEGTDSLFGGDGNDWLVGEG 1925
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +++ G D L D L+GG + + E + G N +
Sbjct: 1926 GDDLLIGGEGNDSLFGGAGADWLEGQAGDDALVGGEGDDVLRGGEGNDWLDGEAGNDVLV 1985
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G G D ++G + ++ +G+DV G +G DT Y + + F
Sbjct: 1986 GGAGNDGLRGGDGADWLVGEAGSDTLSGGAGDDVLFGGAGSDTIQYASGDGRDVVRDFVT 2045
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCI 351
D ++ A Q +
Sbjct: 2046 GGAERDVVAFGPGLFGSFAAVQAATQQV 2073
>gi|163736055|ref|ZP_02143479.1| hypothetical protein RLO149_07204 [Roseobacter litoralis Och 149]
gi|161390682|gb|EDQ15027.1| hypothetical protein RLO149_07204 [Roseobacter litoralis Och 149]
Length = 837
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/366 (13%), Positives = 94/366 (25%), Gaps = 41/366 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + IY GG+D L G + I I + +
Sbjct: 406 SGDDFVAGATGNDLIYGGGGNDTL----RGYSGDDIVNGGFGDDFIILGDGDDQAFGSNG 461
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G +G D + G ++ G+D+ G G D F + +++ + ++
Sbjct: 462 SDNISGGNGADSLWGGKGEDLLKGGGGSDLIRGGEGHDRIF--SGVGNDEVFGGDGNDLM 519
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
Y D L+ + + + G D+
Sbjct: 520 YGG--FGDDTLNG---------------GSGDDQVYAGGGNDIVFGGNGSDIILGNAGSD 562
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G D + ++ D + G G A+ A
Sbjct: 563 LIYGGLGNDRIWGGSGDDKTFGDEGDDLIGGGGGDDFIRGGIGDDFIFGGRNSDAIYGEA 622
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGA 505
++ + + G+D + D D+L G+D
Sbjct: 623 GNDKIFGEDGNDMLFGGAGEDRIFGGSGVDILFGAAGDDILEGGTQNDELFGNEGTDF-- 680
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
R D F L + ++ LI + + A D G +
Sbjct: 681 ------------LRGGDGFDYLNGGSGNDILIGGLGNDILVGGADVD--LIRGGLGNDAF 726
Query: 566 TFNPDL 571
F
Sbjct: 727 QFLATS 732
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/322 (16%), Positives = 84/322 (26%), Gaps = 38/322 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D I + S + AD G G+ + I G
Sbjct: 441 GFGDDFIILGDGDDQAFGSNGSDNI--SGGNGADSLWGGKGEDLLKGGGGSDLIRGGEGH 498
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
S G V+G D + +M D++ S + +
Sbjct: 499 DRIFSGVGNDEVFGGDGN--------DLMYGGFGDDTLNGGSGDDQVYAGGGND--IVFG 548
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
LGN I+ GDD G + + I
Sbjct: 549 GNGSDIILGN---AGSDLIYGGLGNDRIWGGSGDDKT----FGDEGDDLIGGGGGDDFIR 601
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + I +++ G +GND + G N++ F +G D G SG+D F +
Sbjct: 602 GGIGDDFIFGGRNSDAIYGEAGNDKIFGEDGNDMLFGGAGEDRIFGGSGVDILF--GAAG 659
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ ++ DFL L + + LI
Sbjct: 660 DDILEGGTQNDELF--GNEGTDFLRG---------------GDGFDYLNGGSGNDILIGG 702
Query: 375 IGQDVFESMKHFYEFGLSEGRD 396
+G D+ G D
Sbjct: 703 LGNDILVGGADVDLIRGGLGND 724
>gi|239787162|emb|CAQ64441.1| adenylate cyclase-hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 66/484 (13%), Positives = 120/484 (24%), Gaps = 47/484 (9%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D+ + G TI + LGL +G D
Sbjct: 282 GSRLNDRIVGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 341
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + +LG + Y
Sbjct: 342 SDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYY------ 395
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ ++ + + D+L G + + ++ G + + + + + G
Sbjct: 396 DNVRNVENVIGTSMKDVLI----GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYG 451
Query: 274 SSGNDVVIGNSANNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GND + G ++ +GND V G G+DT Y I
Sbjct: 452 DAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGR 511
Query: 323 NAIIVY------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + +A D +S +E + + Q ++L +
Sbjct: 512 IGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 571
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS-DRGAAARHYITH 429
L G DV + GRD + + D N D G
Sbjct: 572 LAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFS 631
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G G + A + A H N V
Sbjct: 632 GPGRGLDAGAKGVFLSLGKG----FASLMDEPETSNVLRHIENAVGSARDDVLI------ 681
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D + G + L A ++DL D L
Sbjct: 682 ---GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGV 738
Query: 550 GKDH 553
G H
Sbjct: 739 GYGH 742
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 51/371 (13%), Positives = 95/371 (25%), Gaps = 32/371 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ T D D+ G G + + LG G
Sbjct: 415 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLG-DDTLEGGAGN 473
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+G E+D + Y T + I A + G
Sbjct: 474 DWFGQTQAREHDVLR----------GGDGVDTVDYSQTGAHAGIAAGRIGLGILADLGAG 523
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ K+ + + ++ L + G + + + G E + +
Sbjct: 524 RVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVLLG 583
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------YLY 316
+ + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 584 GDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFSGPGRGLDAGAKG 643
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ L +E + + + ++L A + L G
Sbjct: 644 VFLSLGKGFASLMDEPETSNVLRHIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAG 703
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
DV + G D DL G D Y + E
Sbjct: 704 DDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGVGYGHDTIYESGG 750
Query: 437 PDAFKALEYIA 447
+ A
Sbjct: 751 GHDTIRINAGA 761
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/341 (13%), Positives = 81/341 (23%), Gaps = 46/341 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N +I + + G SG+D + G + N+ G + G +G D F
Sbjct: 157 IIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLG 216
Query: 313 SYLYKIYRFENAIIVYDA--------------------------------NEHKQDFLSD 340
+ ++ V N D + +
Sbjct: 217 VWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKN 276
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+E L + V + + L + + G D+ +G DI
Sbjct: 277 IENLHGSRLNDRIVGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQ 336
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
DD+ G D + + + +A
Sbjct: 337 DDE--TVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDY 394
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
++ ++ + +G D G G
Sbjct: 395 YDNVRNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGD------------GDDLLFG 442
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D L A ++ L D AG D F E
Sbjct: 443 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTQARE 483
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/365 (11%), Positives = 72/365 (19%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N I + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSRLNDRIVGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYYDNV 398
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+VE + Q + + + L G D+
Sbjct: 399 RNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 458
Query: 390 GLSEGRDITFDSYL------YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 459 YGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGRIGLGILA 518
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 519 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 576
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 577 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRD 626
Query: 564 SITFN 568
++ F+
Sbjct: 627 TVDFS 631
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 1/94 (1%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G + + + G +G+DV++G+ +++ +GND G G D
Sbjct: 673 GSARDDVLIGDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDD 732
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
T+ + IY D L
Sbjct: 733 TYLFGVGYGHDTIYE-SGGGHDTIRINAGADQLW 765
>gi|221134349|ref|ZP_03560654.1| Hemolysin-type calcium-binding region [Glaciecola sp. HTCC2999]
Length = 10022
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 66/516 (12%), Positives = 147/516 (28%), Gaps = 32/516 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D + +N T R D G +IL ++ I G
Sbjct: 8316 GNDTIVETLSNSGDDTLRGQDGDDTLDGGVGNDSIGGDDGADSILGNSGDDSIKGGTGAD 8375
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
N ++G D+ + + + D + A G + +
Sbjct: 8376 FIDGGNDQDSIFGGDDADTINGGSGNDTVFGDAGDDSISAGAGNDTVYGGAGDDEIAGSS 8435
Query: 196 GAPKGSLGNNIYK-----IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G + G + ++ G D++D++ N + N +
Sbjct: 8436 GNNYLAGGEGVDTIVGGSGSDTIAGGTGNDSLNGGSGIDVIDMSESTSSLNIVLGN--AN 8493
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+I + + Q T E ++G ND++ GN++NN+ GND DG +G+DT
Sbjct: 8494 DTITLSDDVLGDDQVTGFEGIIGGQANDIITGNASNNIIGGGLGNDTLDGGAGIDTLDLS 8553
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ ++ + + D + E + +++ ++
Sbjct: 8554 NANQTVEVDLNVTGAVTIADGQGGFDVIRGFENITGGSASDILAGDNANNVIVGNGGFDT 8613
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITF-DSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D + G D S D + ++G + +
Sbjct: 8614 ISGNGGNDNLSAGIGNDSVSGGTGNDTISGGEGNDTISGGDGNDFVDGNQGDDSIYTGAG 8673
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+ N D ++ ++ + + + + +G +TF
Sbjct: 8674 NDRVDENNDGNDTIDVGDGYDSVYAGIGNDLVIGNYEGNRDYYYGEAGTDTITFAHVTTN 8733
Query: 490 GSYDDLRN-----------------VFGSDRGAAARHYITHGVKEGRNPDAF-------K 525
S+ + + G + +Y +G +
Sbjct: 8734 LSFSNWYAGTSTWYGEDYFSSFERIILGQGNDSLTTYYYGTSWVDGDLGNDNISGGRYDD 8793
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
+L A ++ + + AG D G+ +
Sbjct: 8794 SLFGGAGNDSISGGDGNDELFGGAGDDSIWGAGHND 8829
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 60/464 (12%), Positives = 122/464 (26%), Gaps = 27/464 (5%)
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
D+T +T + + + D + G G ++ +
Sbjct: 2641 DITVAQTQTGGTDNDTLTGTSGSDILQGFGGDDSLMGEAGNDTLQGGAGDDELIGGTGID 2700
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD----ASFGYCAT 182
+ + D + D+ ++ S D
Sbjct: 2701 TADYTDETANISVDLDAGTSGATDPNETADTGSDTLTSIENVVAGDGDDTLRGDSNTNQL 2760
Query: 183 PMVSDIVAVQKIYGAPK--GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ + GA G +G++ + + + + T+ G D D +
Sbjct: 2761 EGGAGDDTIDGRQGADTLIGGVGDDSIIGGEGNDRLRGNEGADTLSGGAGTDTADYSDED 2820
Query: 238 GVKNYIDLNTESWSSIGGYEKNM----TIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
++L S + G + IA + +++ G N+V+ GN ++
Sbjct: 2821 SNV-TVNLKDGSATDGSGDTDILEDIENIAGGSGNDTLTGDDTNNVITGNEGDDTLIGGL 2879
Query: 294 GNDVFDGSSGLDTFFYYAP--------SYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
GND +GS+G DT + ++ + + D LS +E +
Sbjct: 2880 GNDTLEGSAGNDTVSFAGSLKNWVVNLFSSDVTNNGQSTASNSAQADTEVDQLSSIENVT 2939
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD-ITFDSYLY 404
+ +++ A + + G D + F G D I + +
Sbjct: 2940 GGAGNDTIYGSDEANVVVGGAGNDVITANGGADTIDGGAGSDTFIGGLGADEIDGGAGID 2999
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
Y N D G + ED I +A +L
Sbjct: 3000 QIDYSATTNALTVDLANNT----ASGDDIDSDTLTNIENVSGGQAEDSITGDDNANELRG 3055
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
G + L + L +D
Sbjct: 3056 NAGSDTLTGGAGNDTLIGGQGTDVLRGGEGLDTASFADVTGPIT 3099
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 55/397 (13%), Positives = 96/397 (24%), Gaps = 25/397 (6%)
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
+++S SDI + A G++ + Q +
Sbjct: 8175 GDDTIISGRGDDVVDGGDGDDEIRFVTTSDITIDLGLTSAQNTGEGSDTFTNFEQVQGGD 8234
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
I D L GG L I G + +I +S+ G + N
Sbjct: 8235 GKDAITGRLDADTL----RGGDGRDTILGLAGDDVIEGEDGRDSIDGGLGADSINGGALN 8290
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D +IG ++ + ND+ G +G DT + R ++ D
Sbjct: 8291 DTIIGGEGDDSIDGGAENDLLTGGAGNDTIVETLSNSGDDTLRGQDGDDTLDGG------ 8344
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ + D + ++ + + QD G D
Sbjct: 8345 -VGNDSIGGDDGADSILGNSGDDSIKGGTGADFIDGGNDQDSIFGGDDADTINGGSGNDT 8403
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
F A A + +G Y+A E +
Sbjct: 8404 VFGD------------AGDDSISAGAGNDTVYGGAGDDEIAGSSGNNYLAGGEGVDTIVG 8451
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV--FGSDRGAAARHYITHGV 515
+ G + G V S L N + G
Sbjct: 8452 GSGSDTIAGGTGNDSLNGGSGIDVIDMSESTSSLNIVLGNANDTITLSDDVLGDDQVTGF 8511
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ A + AS+ + + AG D
Sbjct: 8512 EGIIGGQANDIITGNASNNIIGGGLGNDTLDGGAGID 8548
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 76/438 (17%), Positives = 127/438 (28%), Gaps = 39/438 (8%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
G +N Y + GV ND+ ++ D GY +D +YG
Sbjct: 9465 DGQWNYFYQIEGVLGTQFNDTLRIDRVNTSSNGDDYDAIFGGYLDGNAGND-----ALYG 9519
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
GN+ + TIY G+D +D GG N +I G
Sbjct: 9520 RNSSIDGNDT------LLGNLGNDTIYGQSGNDSID----GGSGNDDLRGGNENDTITGG 9569
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N + + + ++G G D + G + N+ +G+DV DG +G+D A S
Sbjct: 9570 LGNDNLLGESGDDILIGGVGIDTLNGGAGNDTLTGGTGDDVIDGGAGVDVIDLSAASAAL 9629
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
I ++ I D +++VE + +D + + L G
Sbjct: 9630 TIDFSDSTEISITDVNLGSDTVTNVEGVIGSDFADTMTGSDAAEVFGGGLGDDTLDGGEG 9689
Query: 377 QDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
D + + S +I T G D + N GA +
Sbjct: 9690 VDTLDFSRATSGVTFSIAANIGATVTVADGQGGTDTVSNFENVTGGAGNDIFTGDENGNL 9749
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH----FSNFGCEEGRFVTFDSYLYLG 490
+ A D I V H + G + F FD + G
Sbjct: 9750 ISGGAGNDTIIDGDGLDTIYGGDGNDTFVVSVDSHRDTFYGGDGIDIIDFSNFDDGISTG 9809
Query: 491 ----------------SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
+Y ++ + D R + +G + ++
Sbjct: 9810 FYFQTNDTRVLTVNNVNYQNVEGIIAGDGNDNLRFSGSDAYIDG--GAGNDIMTAFGGND 9867
Query: 535 DLINAFADAPDLVQAGKD 552
I AG D
Sbjct: 9868 TFIGGLGQDTIDAGAGND 9885
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 63/483 (13%), Positives = 120/483 (24%), Gaps = 14/483 (2%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
+ + + Y D+ F + + + Y LG +
Sbjct: 8707 GNYEGNRDYYYGEAGTDTITFAHVTTNLSFSNWYAGTSTWYGEDYFSSFERIILGQGNDS 8766
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA- 197
Y VD D ND+ + + D+ G + I+GA
Sbjct: 8767 LTTYYYGTSWVDGDLGNDNISGGRYDDSLFGGAGNDSISGGDGNDELFGGAGDDSIWGAG 8826
Query: 198 -PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT---ESWSSI 253
G + + +LD IDLNT ++S
Sbjct: 8827 HNDTISGGEGNDVISGDWGNGVFDGGEGLDAYAVLDNYSPTNSGFDIDLNTNWQANFSYY 8886
Query: 254 GGYEKNMTIAQH-TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N+ + T E ++G S ND + G +++ GND G G+DT Y
Sbjct: 8887 DNNQSNVLMDITLTNFEGLIGGSYNDTITGTDGSDIIGGYRGNDSLTGGDGIDTLTYGWN 8946
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
V + D +S E L + + + + +I
Sbjct: 8947 GSGNGATVNLGTNTVTNDGYGTVDTISGFENLSGGRGADNLTGSDGDNEIRGDWGNDTII 9006
Query: 373 QVIGQDVFESMKHFYEFGLSEGR---DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+G D ++ S D+ F + + + R + +
Sbjct: 9007 ATLGNDTYDGGDGTDTIDFSNIDVSVDVNFVTNTAVYGENTTRVTYFENVTLGDTDDSIT 9066
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+ + + + + ++
Sbjct: 9067 LASNNAAVTISGGDGVDTLTYISDANLSITNFAFGATTANTLTPDGNRHTYTSIEQFVSG 9126
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D+L G+ G L A ++ + D
Sbjct: 9127 AGNDNLAASAGAANFD-----GGAGDDTINGTANADTLMGGAGNDLINVTAGDDSLDGGE 9181
Query: 550 GKD 552
G D
Sbjct: 9182 GID 9184
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/253 (14%), Positives = 77/253 (30%), Gaps = 15/253 (5%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA----VQ 192
G ++Y + ++++ + A +D V+
Sbjct: 3297 SGEDADLTTATDGSDEYTGNGGDDTLLAGGGDDSADAGAGDDSIVAGEGNDTVSGGTGND 3356
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNT 247
IYG + T+ G+D + D +L G + +
Sbjct: 3357 IIYGGDNPDAEG---SGDDSINAGAGNDTVISGDGNDTVIAEDGDDSLNTGSGDDSVDSG 3413
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+I + I + + G+D+V ++ +GND DG+SG D
Sbjct: 3414 AGADTIEAGTGDDIIRGGAGDDEINAGDGDDIVDAGFGDDTVIGGAGNDTLDGNSGRDLL 3473
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y + I V DA + D +++ E + ++++ A
Sbjct: 3474 DYSTETGDADINLNTG---VVDAPDSGTDTVTNFEDVTAGSGDDTITGGINSNVIDGGAG 3530
Query: 368 YEDLIQVIGQDVF 380
+ + + G D
Sbjct: 3531 ADSISTLSGDDTV 3543
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/317 (12%), Positives = 76/317 (23%), Gaps = 16/317 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + + I D G T+ +L L
Sbjct: 2850 GGSGNDTLTGDDTNNVITGNEGDDTLIGGLGNDTLEGSAGNDTVSFAGSLKNWVVNLFSS 2909
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ D E D + + + S + +
Sbjct: 2910 DVTNNGQSTASNSAQADTEVDQLSSIENVTGGAGNDTIYGSDEANVVVGGAGNDVITANG 2969
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS--- 252
GA G I G D +D + N +
Sbjct: 2970 GADTIDGG----AGSDTFIGGLGADEIDGGAGIDQIDYSATTNALTVDLANNTASGDDID 3025
Query: 253 ---------IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ G + +I + G++G+D + G + N+ G DV G G
Sbjct: 3026 SDTLTNIENVSGGQAEDSITGDDNANELRGNAGSDTLTGGAGNDTLIGGQGTDVLRGGEG 3085
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
LDT + + I ++ + D L +E + + + ++
Sbjct: 3086 LDTASFADVTGPITIDLSLGTVVTSAGSNAGADTLESIENVIGTGSTDTIIGSDDANRID 3145
Query: 364 YTASYEDLIQVIGQDVF 380
+ + G D
Sbjct: 3146 GAGGADTVDAGAGNDTV 3162
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/440 (10%), Positives = 87/440 (19%), Gaps = 28/440 (6%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ T + D G G ++ + G
Sbjct: 1646 TVTGGAGNDTTIGGAGNDTVSGDAGDDSTGGGEGDDSVDGGEGNDTVTGGAGNDTTTGGA 1705
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G V G D + + G T V G
Sbjct: 1706 GNDTVSGDAGDDSTGGGDGDDSVDGGAGNDTVTGGTGSDTTLGGEGDDTVSGGAGNDTVF 1765
Query: 202 LGNNIYKI--------------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ T G+D +
Sbjct: 1766 GDAGDDSVDGGDGDDSVDGGEGNDTVTGGAGSDTTLGGAGNDTVSGDAGDDSTGG----G 1821
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ S+ G E N T+ ++ G +GND V G++ ++ G+D DG G DT
Sbjct: 1822 DGDDSVDGGEGNDTVTGGAGNDTTTGGAGNDTVSGDAGDDSTGGGEGDDSVDGGEGNDTV 1881
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ V D + + A
Sbjct: 1882 --TGGAGNDTTTGGAGNDTVSGDAGDDSTGG--------GDGDDSVDGGEGNDTVTGGAG 1931
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ I G D G +G D N +
Sbjct: 1932 NDTTIGGAGNDSVSGDAGDDSTGGGDGDDTVDGGEGNDTVTGGAGNDTTTGGAGNDTVSG 1991
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
G +++ + + + G D + +
Sbjct: 1992 EAGDDSVSGGTGDDSVDGGEGDDSVDGGAGNDTVNGGAGNDSIDGGEGADSIAAGSGNDT 2051
Query: 488 YLGSYDDLRNVFGSDRGAAA 507
+ +D+ +
Sbjct: 2052 IIYDANDVLIDGQAGTDTLL 2071
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 51/412 (12%), Positives = 98/412 (23%), Gaps = 19/412 (4%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ T + D G G ++ + G
Sbjct: 1835 TVTGGAGNDTTTGGAGNDTVSGDAGDDSTGGGEGDDSVDGGEGNDTVTGGAGNDTTTGGA 1894
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G V G D + + G T + +V G
Sbjct: 1895 GNDTVSGDAGDDSTGGGDGDDSVDGGEGNDTVTGGAGNDTTIGGAGNDSV----SGDAGD 1950
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ T+ G+D GG N S+ G + +
Sbjct: 1951 DSTGGGDGDDTVDGGEGNDTVTGGAGNDTTT----GGAGNDTVSGEAGDDSVSGGTGDDS 2006
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ +SV G +GND V G + N+ G D SG DT Y A L
Sbjct: 2007 VDGGEGDDSVDGGAGNDTVNGGAGNDSIDGGEGADSIAAGSGNDTIIYDANDVLIDGQAG 2066
Query: 322 ENAIIVYDANEH----KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ +++ D+ L ++E ++ + S+ + + + + + V G
Sbjct: 2067 TDTLLIQDSEVDLTLVDDAILKNIEVIQLDNNSGVSLTINGTDLAALLDTETNRLYVRGS 2126
Query: 378 DVFESM-------KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
D E + + + + + G
Sbjct: 2127 DTDTVEILDIFTADGTQTLDGVEYNVFSNATQAIWIESTIDSSAVIPSGPGNDEYPGSEG 2186
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ ++ L + G D + +
Sbjct: 2187 DDTYNGEGGDDTIAGEEGNDSLDGDTGNDSVDGGEGNDTVTGGAGNDTTTGG 2238
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 2/125 (1%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N T++ ++ ++V G +G+D ++ N+ N+ +G+D + G+D + S
Sbjct: 7322 GGGNDTVSGSSLNDTVFGEAGDDSIVTNNGNDWISGGAGDDTLNAGGGIDVLNFSEVSGA 7381
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ V + + D +S E + + + A + L
Sbjct: 7382 VTVDLDAG--TVANDGQGGTDTISGFENVLGGTGNDNITGSAAAETIAGGAGNDTLNGGD 7439
Query: 376 GQDVF 380
G D
Sbjct: 7440 GTDTV 7444
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 54/389 (13%), Positives = 109/389 (28%), Gaps = 28/389 (7%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ E++ +I ++N T + + G I + + +
Sbjct: 8476 IDMSESTSSLNIVLGNAN----DTITLSDDVLGDDQVTGFEGIIGGQANDIITGNASNNI 8531
Query: 128 IGHALG---LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
IG LG L + + + +V + F
Sbjct: 8532 IGGGLGNDTLDGGAGIDTLDLSNANQTVEVDLNVTGAVTIADGQGGFDVIRGFENITGGS 8591
Query: 185 VSDIVAVQKIYGAPKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
SDI+A G+ G + ++ G+D + GG N
Sbjct: 8592 ASDILAGDNANNVIVGNGGFDTISGNGGNDNLSAGIGNDSVSGGTGNDTI----SGGEGN 8647
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS-GNDVVIGNSANNVFFESSGNDVFDG 300
+ + G + + +I + V ++ GND + + + GND+ G
Sbjct: 8648 DTISGGDGNDFVDGNQGDDSIYTGAGNDRVDENNDGNDTIDVGDGYDSVYAGIGNDLVIG 8707
Query: 301 SSGLDTFFYYAPSYLYKIYRFE-------NAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
+ + +YY + I + + + +D+ S ER+
Sbjct: 8708 NYEGNRDYYYGEAGTDTITFAHVTTNLSFSNWYAGTSTWYGEDYFSSFERIILGQGNDSL 8767
Query: 354 VN-VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGS 407
S ++ +++ D +G D F DS G
Sbjct: 8768 TTYYYGTSWVDGDLGNDNISGGRYDDSLFGGAGNDSISGGDGNDELFGGAGDDSIWGAGH 8827
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + G+D + EG +
Sbjct: 8828 NDTISGGEGNDVISGDWGNGVFDGGEGLD 8856
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 57/351 (16%), Positives = 105/351 (29%), Gaps = 21/351 (5%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
T+ G+D GG N S+ G E + ++ ++V G +GND
Sbjct: 2439 NDTVTGGAGNDTTT----GGAGNDTVSGDAGDDSVDGGEGDDSVDGGAGNDTVNGGAGND 2494
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-- 336
V+G N+ G+D G DT Y L + ++V DA
Sbjct: 2495 TVLGGEGNDSIDGGLGSDSITAGDGDDTIIYDRNDVLIDGGAGTDTLVVNDAEVDFTTIS 2554
Query: 337 --FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD-----------VFESM 383
L ++E + + + + + S+ T S ++ V G D ++
Sbjct: 2555 SPVLHNIEIIDLSGPNASQITLNEASVFAITDSDPAVLTVNGNDLDIVNIIGAWTQGATV 2614
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGRNPDAFKA 442
+ + + + L + D+ + T G + +
Sbjct: 2615 DGYNVYTGTTVNSDNNTVNVTLNIFRDITVAQTQTGGTDNDTLTGTSGSDILQGFGGDDS 2674
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
L A ++ L D + G D V D+ + + GSD
Sbjct: 2675 LMGEAGNDTLQGGAGDDELIGGTGIDTADYTDETANISVDLDAGTSGATDPNETADTGSD 2734
Query: 503 RGAAARHYIT-HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ + + G R LE A + + + G D
Sbjct: 2735 TLTSIENVVAGDGDDTLRGDSNTNQLEGGAGDDTIDGRQGADTLIGGVGDD 2785
Score = 57.5 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 47/389 (12%), Positives = 105/389 (26%), Gaps = 8/389 (2%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
N T S + AD G I I LG +G
Sbjct: 8962 TNDGYGTVDTISGFENLSGGRGADNLTGSDGDNEIRGDWGNDTIIATLGNDTYDGGDGTD 9021
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ + D D + + + + + ++ T +D A G
Sbjct: 9022 TIDFSNIDVSVDVNFVTNTAVYGENTTRV--TYFENVTLGDTDDSITLASNNAAVTISGG 9079
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL----NTESWSSIGGYEKNM 260
+ D+ T + G LT G Y + + ++
Sbjct: 9080 DGVDTLTYISDANLSITNFAFGATTANTLTPDGNRHTYTSIEQFVSGAGNDNLAASAGAA 9139
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+++ G++ D ++G + N++ ++G+D DG G+D A + I
Sbjct: 9140 NFDGGAGDDTINGTANADTLMGGAGNDLINVTAGDDSLDGGEGIDALNISAATNDVNIDL 9199
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + L++ E + ++ + LI G D+
Sbjct: 9200 STDWESTLTVTGLGSNTLTNFEGVLAGSGDDAITGSDGDDVIGGGDGVDTLIGGEGNDIL 9259
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ +++ + + + + +A + N +
Sbjct: 9260 SFANITAAVNVDLTQNLILND--GFSNEETISGFETVIGSSANDTIKGSEAADELNGQSG 9317
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDH 469
Y + D I + + +
Sbjct: 9318 NDYFYGTAGNDTIIGGLGSDTIDYSAYEG 9346
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/358 (14%), Positives = 83/358 (23%), Gaps = 26/358 (7%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
G D T+ +A I L +G
Sbjct: 7700 QGSTFGDTISVNNSSVDGGAGDDTLTGAGSSDTLNYVSATANITVNLTTGSATDEHGDTD 7759
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
S +V + D++ V G GN+
Sbjct: 7760 TLSGFETVRTGSGNDNVTGSDANESFYSGTGNDTVNAGDGDDVICVNTGNDVIDGGAGND 7819
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDL------------------LDLTLIGGVKNYIDLNT 247
+ + + + +S G D I+
Sbjct: 7820 TVNFATELPFTAILIDLSNSSGVASDIGTKIITNVENIVTGFGEDTITGSTNAETINSAG 7879
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S S I N + ++V G +G+D + G + N+ G D G SG DT
Sbjct: 7880 GSDS-INAGAGNDVVLSGDENDTVDGGAGDDRLEGQNGNDSLSGGIGADTLLGGSGQDTL 7938
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A + I D ++ A S + + A
Sbjct: 7939 RGEAGDDSIDGGNESDLIYGGDGSDTLSGGAGSDTLFGGAGDDSFSHSNSGTDRIYGEAG 7998
Query: 368 YEDLI-----QVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSD 418
+ L G +F+ L + TFD Y+ D D
Sbjct: 7999 DDSLSYTAYNSANGTVLFDGGAGNDTLVLVDQSTKRFTFDDSAYVRLNDVEVIELAGD 8056
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 56/501 (11%), Positives = 118/501 (23%), Gaps = 28/501 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ T + + AD G G TI+ I G
Sbjct: 2008 DGGEGDDSVDGGAGNDTVNGGAGNDSIDGGEGADSIAAGSGNDTIIYDANDVLIDGQAGT 2067
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ-K 193
VD +D+ L ++ + +S + + + D +
Sbjct: 2068 D-----TLLIQDSEVDLTLVDDAILKNIEVIQLDNNSGVSLTINGTDLAALLDTETNRLY 2122
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE----- 248
+ G+ ++ + ++ S + + I
Sbjct: 2123 VRGSDTDTVEILDIFTADGTQTLDGVEYNVFSNATQAIWIESTIDSSAVIPSGPGNDEYP 2182
Query: 249 ---SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G + TIA +S+ G +GND V G N+ +GND G +G D
Sbjct: 2183 GSEGDDTYNGEGGDDTIAGEEGNDSLDGDTGNDSVDGGEGNDTVTGGAGNDTTTGGAGND 2242
Query: 306 TF--------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ N + A + + + +
Sbjct: 2243 SVSGDAGDDSTGGGDGDDTVDGGEGNDTVTGGAGNDTTIGGAGNDTVSGDAGDDSTGGGD 2302
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
++ + + G D G +G D N +
Sbjct: 2303 GDDTVDGGEGNDTVTGGAGNDTVSGDSGDDSTGGGDGDDSVDGGEGNDTVTGGAGNDTTT 2362
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
G D +++ ++ + + G D S ++
Sbjct: 2363 GGAGNDTVSGDAGDDSTGGGDGDDSVDGGEGNDTVTGGAGNDTTTGGAGNDTVSGDAGDD 2422
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAA------RHYITHGVKEGRNPDAFKALEYIA 531
G + G+ G + +++ A
Sbjct: 2423 STGGGDGDDSVDGGEGNDTVTGGAGNDTTTGGAGNDTVSGDAGDDSVDGGEGDDSVDGGA 2482
Query: 532 SHEDLINAFADAPDLVQAGKD 552
++ + + L G D
Sbjct: 2483 GNDTVNGGAGNDTVLGGEGND 2503
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 41/304 (13%), Positives = 68/304 (22%), Gaps = 39/304 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T G+D + + ++ G E N T+ + +
Sbjct: 1464 NDTVTGGAGNDTTIGGAGNDTVSGDAGDDSTGG----GDGDDTVDGGEGNDTVTGGSGND 1519
Query: 270 SVVGSSGNDVVIGNSA------------------NNVFFESSGNDVFDGSSGLDTF---- 307
+ G +GND V G++ N+ +GND G +G DT
Sbjct: 1520 TTTGGAGNDTVSGDAGDDSTGGGDGDDSVDGGEGNDTVTGGAGNDTTTGGAGNDTVSGDA 1579
Query: 308 ----------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
A D +S +V
Sbjct: 1580 GDDSTGGGDGDDTVDGGEGNDTVTGGAGNDTTTGGAGNDTVSGDAGDDSTGGGDGDDSVD 1639
Query: 358 Q---RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ A + I G D G EG D N
Sbjct: 1640 GGEGNDTVTGGAGNDTTIGGAGNDTVSGDAGDDSTGGGEGDDSVDGGEGNDTVTGGAGND 1699
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
+ G D +++ A ++ + L G D S
Sbjct: 1700 TTTGGAGNDTVSGDAGDDSTGGGDGDDSVDGGAGNDTVTGGTGSDTTLGGEGDDTVSGGA 1759
Query: 475 CEEG 478
+
Sbjct: 1760 GNDT 1763
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 45/396 (11%), Positives = 89/396 (22%), Gaps = 18/396 (4%)
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
D G G +I I G V G
Sbjct: 1002 NDTVTGGAGNDTVIGGTGDDSIDGGEGADSIAAGSGNDTIIFDANDLLVDGQTGTDTLII 1061
Query: 158 FLTSVMSYFMPQDSMMD-------ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
++ + D + + G + +D+VA+ + G +
Sbjct: 1062 QEDTLDLNDVNNDIIKNIEIIQLQNDSGVAFSMSETDLVALLESGNERLIIEGAQS---D 1118
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
V F +S + ++ G++ ++ N S TI ++
Sbjct: 1119 VVTLYGVFSDLGIESLDNANYNVFGFDGLEIFVRENIGSSVVFPTTPGADTIPGTRSDDT 1178
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFEN 323
+ G G+D V G N+ +GND G +G DT +
Sbjct: 1179 IDGGEGDDSVDGGEGNDTVTGGAGNDTTTGGAGNDTVSGDEGDDSTGGGDGDDSVDGGAG 1238
Query: 324 AIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
V + + + + + + ++ + + G D
Sbjct: 1239 NDTVSGGSGNDTTTGGAGNDTVSGDAGDDSTGGGDGDDSVDGGEGNDTVTGGAGNDTTTG 1298
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G D T N + G +
Sbjct: 1299 GAGNDTVSGDAGDDSTGGGDGDDTVDGGEGNDTVTGGAGNDTTTGGAGNDTVSGDAGDDS 1358
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ + + G D +
Sbjct: 1359 TGGGDGDDSVDGGEGNDTVTGGAGNDTTIGGAGNDT 1394
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 37/115 (32%), Gaps = 3/115 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ ++ + + G D D + I+ + + + I T +
Sbjct: 486 DQDPINAANSDSPIEVEGSDQEDSVSGSAQGDTIN-AAGGNDFVDAGKGDDVIDAGTGDD 544
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+V G GND G+ ++ +GND G G DT + E
Sbjct: 545 TVSGGDGNDSTSGDEGDDSVEGGAGNDTVTGGIGSDTTL--GGEGDDTVSGGEGN 597
Score = 45.2 bits (105), Expect = 0.041, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 64/163 (39%), Gaps = 8/163 (4%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
T+ G+D GG N S GG + + ++ ++V G +GND
Sbjct: 957 NDTVTGGAGNDTTT----GGAGNDTISGDAGDDSTGGGDGDDSVDGGEGNDTVTGGAGND 1012
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV----YDANEHK 334
VIG + ++ G D SG DT + A L + +I+ D N+
Sbjct: 1013 TVIGGTGDDSIDGGEGADSIAAGSGNDTIIFDANDLLVDGQTGTDTLIIQEDTLDLNDVN 1072
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
D + ++E ++ + + ++ + ++ S + + + G
Sbjct: 1073 NDIIKNIEIIQLQNDSGVAFSMSETDLVALLESGNERLIIEGA 1115
Score = 44.8 bits (104), Expect = 0.045, Method: Composition-based stats.
Identities = 56/436 (12%), Positives = 103/436 (23%), Gaps = 37/436 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+D Y ++E D + V G G G
Sbjct: 2137 FTADGTQTLDGVEYNVFSNATQAIWIESTIDSSAVIPSGPGNDEYPGSEGDDTYN---GE 2193
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G +D D NDS + + + D + G VS
Sbjct: 2194 GGDDTIAGEEGNDSLDGDTGNDSVDGGEGNDTVTGGAGNDTTTGGAGNDSVSGDAGDDST 2253
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES----- 249
G G + + T G+D + D +
Sbjct: 2254 -GGGDGDDTVDGGEGNDTVTGGAGNDTTIGGAGNDTVSGDAGDDSTGGGDGDDTVDGGEG 2312
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G N T++ + +S G G+D V G N+ +GND G +G DT
Sbjct: 2313 NDTVTGGAGNDTVSGDSGDDSTGGGDGDDSVDGGEGNDTVTGGAGNDTTTGGAGNDTVSG 2372
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
A ++++ + + A +
Sbjct: 2373 DAGDDSTGGGDGDDSV----------------------------DGGEGNDTVTGGAGND 2404
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
G D G +G D N +
Sbjct: 2405 TTTGGAGNDTVSGDAGDDSTGGGDGDDSVDGGEGNDTVTGGAGNDTTTGGAGNDTVSGDA 2464
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G + +++ A ++ + + L G D + +
Sbjct: 2465 GDDSVDGGEGDDSVDGGAGNDTVNGGAGNDTVLGGEGNDSIDGGLGSDSITAGDGDDTII 2524
Query: 490 GSYDDLRNVFGSDRGA 505
+D+ G+
Sbjct: 2525 YDRNDVLIDGGAGTDT 2540
Score = 44.4 bits (103), Expect = 0.063, Method: Composition-based stats.
Identities = 48/425 (11%), Positives = 86/425 (20%), Gaps = 27/425 (6%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
F+ N G D G G ++ + G
Sbjct: 1150 FVRENIGSSVVFPTTPGADTIPGTRSDDTIDGGEGDDSVDGGEGNDTVTGGAGNDTTTGG 1209
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-----IVAVQKIY 195
G V G + D + + G T + A
Sbjct: 1210 AGNDTVSGDEGDDSTGGGDGDDSVDGGAGNDTVSGGSGNDTTTGGAGNDTVSGDAGDDST 1269
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK--------------N 241
G G + + T G+D + N
Sbjct: 1270 GGGDGDDSVDGGEGNDTVTGGAGNDTTTGGAGNDTVSGDAGDDSTGGGDGDDTVDGGEGN 1329
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ G N T++ +S G G+D V G N+ +GND G
Sbjct: 1330 DTVTGGAGNDTTTGGAGNDTVSGDAGDDSTGGGDGDDSVDGGEGNDTVTGGAGNDTTIGG 1389
Query: 302 SGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDS 353
+G DT + E V + + + + + +
Sbjct: 1390 AGNDTVSGDAGDDSTGGGDGDDTVDGGEGNDTVTGGSGNDTTTGGAGNDTVSGDAGDDST 1449
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
++ + + G D G D T N
Sbjct: 1450 GGGDGDDSVDGGEGNDTVTGGAGNDTTIGGAGNDTVSGDAGDDSTGGGDGDDTVDGGEGN 1509
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ G + + + + G D +
Sbjct: 1510 DTVTGGSGNDTTTGGAGNDTVSGDAGDDSTGGGDGDDSVDGGEGNDTVTGGAGNDTTTGG 1569
Query: 474 GCEEG 478
+
Sbjct: 1570 AGNDT 1574
Score = 42.9 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 47/341 (13%), Positives = 99/341 (29%), Gaps = 30/341 (8%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
L ++ D + D+ +L+ + + ++S +++ + ++
Sbjct: 9591 DTLNGGAGNDTLTGGTGDDVIDGGAGVDVIDLSAASAALTI----DFSDSTEISITDVNL 9646
Query: 76 HSDIKFISSN---NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
SD + + T + D G G T+ A + ++
Sbjct: 9647 GSDTVTNVEGVIGSDFADTMTGSDAAEVFGGGLGDDTLDGGEGVDTLDFSRATSGVTFSI 9706
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
+ G D ++ + D + G + D +
Sbjct: 9707 AANIGATVTVADGQGGTDTVSNFENVTGGAGNDIFTGDENGNLISGGAGNDTIIDGDGLD 9766
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY---------- 242
IYG GN+ + + V T Y G D++D + +
Sbjct: 9767 TIYGGD----GNDTFVVSVDSHR----DTFYGGDGIDIIDFSNFDDGISTGFYFQTNDTR 9818
Query: 243 ----IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
++N ++ I + N + + G +GND++ N+ F G D
Sbjct: 9819 VLTVNNVNYQNVEGIIAGDGNDNLRFSGSDAYIDGGAGNDIMTAFGGNDTFIGGLGQDTI 9878
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
D +G D + + I + DF S
Sbjct: 9879 DAGAGNDIIHFD-SDAVDSIQASSGTDTILFNTTETLDFAS 9918
Score = 41.7 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 83/652 (12%), Positives = 158/652 (24%), Gaps = 71/652 (10%)
Query: 45 TELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINF 104
+++ N Q A + ++V L+ E + + +
Sbjct: 2909 SDVTNNGQSTASNSAQADTEVDQLSSIENVTGGAGNDTIYGSDEANVVVGGAGNDVITAN 2968
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
AD G G T + EI G+ Y+ VD S
Sbjct: 2969 GGADTIDGGAGSDTFIGGLGADEIDGGAGID-QIDYSATTNALTVDLANNTASGDD---I 3024
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
++ + S G + D A + A +L +
Sbjct: 3025 DSDTLTNIENVSGGQAEDSITGDDNANELRGNAGSDTLTGGA--GNDTLIGGQGTDVLRG 3082
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G D + G +S G T+ IE+V+G+ D +IG+
Sbjct: 3083 GEGLDTASFADVTGPITIDLSLGTVVTSAGSNAGADTLE---SIENVIGTGSTDTIIGSD 3139
Query: 285 ANNVFFE---------SSGNDVF---------DGSSGLDTFFYYAPSYLYKIYRFENAII 326
N +GND DG +G+D + L +
Sbjct: 3140 DANRIDGAGGADTVDAGAGNDTVVFDEDDGMVDGGAGIDALEVGSSVSLLDLTVTR--DE 3197
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY-------------TASYEDLIQ 373
+Y E + L+ +D I ++N +
Sbjct: 3198 IYTNFEQIDLSAEGAQILKLSDSDIRNLNNDEIGATSGTIVVKGTDADSIRLVGANWPTT 3257
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+ + + + G T + + +D A +
Sbjct: 3258 PTSTETIDGIDYDVYAYDVVGGTTTLKVQDGIAVGFIFVSGEDADLTTATDGSDEYTGNG 3317
Query: 434 GRN----PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G + + + A + ++ + G D + DS
Sbjct: 3318 GDDTLLAGGGDDSADAGAGDDSIVAGEGNDTVSGGTGNDIIYGGDNPDAEGSGDDSINAG 3377
Query: 490 GSYDDLRNVFGSDR----------------------GAAARHYITHGVKEGRNPDAFKAL 527
D + + G+D A G R +
Sbjct: 3378 AGNDTVISGDGNDTVIAEDGDDSLNTGSGDDSVDSGAGADTIEAGTGDDIIRGGAGDDEI 3437
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF---NPDLYLTSYDDLWNVFG 584
+ + F D + AG D + + + D+ L + G
Sbjct: 3438 NAGDGDDIVDAGFGDDTVIGGAGNDTLDGNSGRDLLDYSTETGDADINLNTGVVDAPDSG 3497
Query: 585 SDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKK 636
+D + + GI+ S D ++ FD +
Sbjct: 3498 TDTVTNFEDVTAGSGDDTITGGINSNVIDGGAGADSISTLSGDDTVIFDAQD 3549
Score = 38.6 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 2/108 (1%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ GS+G+D V G+ N+V G D G +G DT Y A I +
Sbjct: 3681 DLNGSAGDDTVRGDDGNDVIDGGDGADTIRGEAGDDTIIYDASD--VLIDGGTGTDTLLF 3738
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+++ + +R + N++ + A+ LI
Sbjct: 3739 VGQNELLDFTQADRSNTDGNRPEVANIEIIDLHGTGAANNTLIINSAT 3786
Score = 38.6 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 48/459 (10%), Positives = 88/459 (19%), Gaps = 44/459 (9%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE----------IGHALGLMHPG 138
T S D G + + G A G
Sbjct: 1239 NDTVSGGSGNDTTTGGAGNDTVSGDAGDDSTGGGDGDDSVDGGEGNDTVTGGAGNDTTTG 1298
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI----VAVQKI 194
+D + D++ + T + A
Sbjct: 1299 GAGNDTVSGDAGDDSTGGGDGDDTVDGGEGNDTVTGGAGNDTTTGGAGNDTVSGDAGDDS 1358
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G G + + T G+D + + ++
Sbjct: 1359 TGGGDGDDSVDGGEGNDTVTGGAGNDTTIGGAGNDTVSGDAGDDSTG----GGDGDDTVD 1414
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVI------------------GNSANNVFFESSGND 296
G E N T+ + ++ G +GND V G N+ +GND
Sbjct: 1415 GGEGNDTVTGGSGNDTTTGGAGNDTVSGDAGDDSTGGGDGDDSVDGGEGNDTVTGGAGND 1474
Query: 297 VFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFAD 348
G +G DT + E V + + + + +
Sbjct: 1475 TTIGGAGNDTVSGDAGDDSTGGGDGDDTVDGGEGNDTVTGGSGNDTTTGGAGNDTVSGDA 1534
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ ++ + + G D G D T
Sbjct: 1535 GDDSTGGGDGDDSVDGGEGNDTVTGGAGNDTTTGGAGNDTVSGDAGDDSTGGGDGDDTVD 1594
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
N + G + + + + G D
Sbjct: 1595 GGEGNDTVTGGAGNDTTTGGAGNDTVSGDAGDDSTGGGDGDDSVDGGEGNDTVTGGAGND 1654
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ G D G
Sbjct: 1655 TTIGGAGNDTVSGDAGDDSTGGGEGDDSVDGGEGNDTVT 1693
Score = 37.8 bits (86), Expect = 6.7, Method: Composition-based stats.
Identities = 51/401 (12%), Positives = 114/401 (28%), Gaps = 50/401 (12%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISS 84
+ F T+ + + L+ ++ + LG + V + S +
Sbjct: 6691 DGFADVSFSNNTSSNIFYGSQVLSGT-RDASLGNLGNGNDV--VQVISVSAGGTLTGARG 6747
Query: 85 NNGYVCTPR----YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+N + + I+ ADV G G + + L
Sbjct: 6748 DNPVALFGQDRLIGNVGNDTLISDGGADVLIGGAGDDA---LTIVDDNFFRLDGGSGIDT 6804
Query: 141 NGGYPVYGVDNDYEN--------------DSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
+D + + D+ ++ + + + +
Sbjct: 6805 LTLKGDMSLDMNSASSNSVESIEIISLGTDTQALTLSDLDVLNMTNGTNTAVDNIDYQLG 6864
Query: 187 DIVAVQKIYGAPKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIG----GV 239
+++ V G +L + TIY + G ++ +T + +
Sbjct: 6865 NVLVVDGTDGTDTLTLNGAQWLDTGDTTTVNGGSTTFTIYQASGKNIFVITTLTPVIVSL 6924
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
D +T I G T + +++ +G+D + G N+V ++GNDV
Sbjct: 6925 SAVADTSTTGNDVIYGESGADTFVADSGNDTIYAGAGSDDIAGGEGNDVIVGAAGNDVIA 6984
Query: 300 GSSGLDTF----------------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
G++G D + I + + D S++E
Sbjct: 6985 GNAGNDFITAGTGDDTIDGGDDTDTLSYANNGQSIAVSYTNATDGNVSGQGSDEFSNIEH 7044
Query: 344 LRFADQCID---SVNVKQRSILEYTASYEDLIQVIGQDVFE 381
++ Q S +++ + I G D +
Sbjct: 7045 IQGTSQADTYTASTAGNTFTVINARGGNDSFIGGAGTDTLD 7085
Score = 37.5 bits (85), Expect = 7.8, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 51/143 (35%), Gaps = 5/143 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G I + + G G D++ G + ++ + + G SG+DT
Sbjct: 4369 ITGTTGQDAIKSGAGADIIDGGEGADIIYGEAGDDTVTYDADDLRVFGGSGIDTLIIKDE 4428
Query: 313 SYLYKIYRFENAIIVYDANEHKQ-----DFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ N ++ DA + D + E + + SV V + ++L + S
Sbjct: 4429 DTIDGGADNTNDLLNTDAGDVDLSAIVPDTVEGFEIIDLSGNGNQSVYVDRDTVLALSDS 4488
Query: 368 YEDLIQVIGQDVFESMKHFYEFG 390
+ ++ DV + + G
Sbjct: 4489 GKLTVRGESDDVLKLYGGWTTLG 4511
Score = 37.1 bits (84), Expect = 9.1, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 86/287 (29%), Gaps = 32/287 (11%)
Query: 91 TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD 150
+ +D+ + G G TI+ A I + + VD
Sbjct: 3882 LIEGRAGNDSINGQGGSDLIKGGAGNDTIVFDAADVLIDGG------ADTDILNILSDVD 3935
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY--- 207
+ +D+ + ++ + + ++ + A+ SD + V + GN +
Sbjct: 3936 LNNVDDNKIINIETVNLAANTTLTAAGSDLLALNSSDSLLVTGDATSTLALQGNWVEAAD 3995
Query: 208 -KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT-ESWSSIGGYEKNMTIAQH 265
+ + +D+ G DL + ++ G N I
Sbjct: 3996 DGTNTTFTLTEGTVSSSVVVSNDVAVTITYTGTNLRDDLTSFAGDQTLVGLNGNDEIDGG 4055
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+++++G SG+D +I + + GND
Sbjct: 4056 AGVDTLLGGSGDDDLIYDENDGNIDGGEGNDTL---------------------VISGNG 4094
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ D E +++VE + ++ V + + S LI
Sbjct: 4095 VTLDLPEIDNSLINNVESIDLTGTGNNTAVVNADDVQAISTSTNTLI 4141
>gi|330992569|ref|ZP_08316517.1| hypothetical protein SXCC_02476 [Gluconacetobacter sp. SXCC-1]
gi|329760768|gb|EGG77264.1| hypothetical protein SXCC_02476 [Gluconacetobacter sp. SXCC-1]
Length = 1017
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 78/261 (29%), Gaps = 17/261 (6%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDL 411
Y + L+ +G + E+ + G + G FD Y +Y +
Sbjct: 44 AGWAAFDPAWYCTRHAALLDTLGVEPGEAHAFYTTHGAALGHSPNAFFDETWYRQAYPGV 103
Query: 412 RNVFGSDR-GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ HY+ G++ F Y A+ DL A + + G DH+
Sbjct: 104 ARAIAQGIWPSGFAHYLQAGLRTHSPHWLFDEHAYRAACPDLTQAVMEDG-GYRNGYDHY 162
Query: 471 SNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA---FK 525
G E R + FD L + Y+ G+ + F
Sbjct: 163 LRAGDGEMRTGSCFFDPVTCLAL---VPENGRDAAAHPFVDYLLRGMAAMPDRAVSVYFD 219
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFS--NFGYEEGRSITFNPDLYLTSYDDLWNVF 583
A Y+ ++ + A H+ F+ Y + D+
Sbjct: 220 AGWYVRTYPAVQAAI--DRGEWLCALHHYLCNTTPLAFDPGPFFSESFYASVNPDVLEAV 277
Query: 584 GSDR-SAAAQHYITHGMKEGR 603
S R HY++ G+ E R
Sbjct: 278 ESGRLRNGYAHYLSDGVFEQR 298
>gi|300312185|ref|YP_003776277.1| calcium binding secreted hemolysin protein [Herbaspirillum
seropedicae SmR1]
gi|300074970|gb|ADJ64369.1| calcium binding secreted hemolysin protein [Herbaspirillum
seropedicae SmR1]
Length = 984
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 55/174 (31%), Gaps = 13/174 (7%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G+D+L I+ N I G + + T+ T G + NDV+ G
Sbjct: 409 GGAGNDVL----FATNGEEINGN-GGDDVIYGGDGDDTLVGGTYSALARGETDNDVLYGG 463
Query: 284 SANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQD 336
+ + GND+ DG +G D + Y S ++ +A
Sbjct: 464 AGKDSLSGGVGNDLLDGGTGDDRMYGGAGDDIYVVDSAGDGVFENADAGRDTVLAGMSTT 523
Query: 337 FLSDVERLR-FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+VE LR + + L + L + G D + +
Sbjct: 524 LGENVEDLRLLEGGSYNGTGNFLDNRLTGNSQDNILDGLAGADTMMGGQGNDRY 577
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 49/208 (23%), Gaps = 47/208 (22%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GNDV+ + + G+DV G G DT S L +
Sbjct: 409 GGAGNDVLFATNGE-EINGNGGDDVIYGGDGDDTLVGGTYSALAR--------------- 452
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+L A + L +G D+ +
Sbjct: 453 ----------------------GETDNDVLYGGAGKDSLSGGVGNDLLDGGTGDDRMYGG 490
Query: 393 EGRDITFDSYLYLGSY-------DDLRNVFGSDRGAAARH--YITHGVKEGRNPDAFKAL 443
G DI G + D + + G + G G L
Sbjct: 491 AGDDIYVVDSAGDGVFENADAGRDTVLAGMSTTLGENVEDLRLLEGGSYNGTGNFLDNRL 550
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFS 471
+ L + G D +
Sbjct: 551 TGNSQDNILDGLAGADTMMGGQGNDRYF 578
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 13/79 (16%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G+ +++++GN NN+ + GND G +G DT+ + + +
Sbjct: 829 ATGNELDNILVGNQDNNLLTGAKGNDTLTGQAGNDTYVFGKGDGRDLVVDQDA------- 881
Query: 331 NEHKQDFLSDVERLRFADQ 349
+++ ++F+D
Sbjct: 882 ------TAGNIDTIKFSDA 894
Score = 39.8 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLG 406
+ + + +IL L G D FG +GRD+ D G
Sbjct: 825 RDSSATGNELDNILVGNQDNNLLTGAKGNDTLTGQAGNDTYVFGKGDGRDLVVDQDATAG 884
Query: 407 SYDDLR 412
+ D ++
Sbjct: 885 NIDTIK 890
>gi|239787164|emb|CAQ64442.1| adenylate cyclase-hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 66/484 (13%), Positives = 120/484 (24%), Gaps = 47/484 (9%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D+ + G TI + LGL +G D
Sbjct: 282 GSRLNDRIVGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 341
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + +LG + Y
Sbjct: 342 SDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYY------ 395
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ ++ + + D+L G + + ++ G + + + + + G
Sbjct: 396 DNVRNVENVIGTSMKDVLI----GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYG 451
Query: 274 SSGNDVVIGNSANNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GND + G ++ +GND V G G+DT Y I
Sbjct: 452 DAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGR 511
Query: 323 NAIIVY------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + +A D +S +E + + Q ++L +
Sbjct: 512 IGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 571
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS-DRGAAARHYITH 429
L G DV + GRD + + D N D G
Sbjct: 572 LAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFS 631
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G G + A + A H N V
Sbjct: 632 GPGRGLDAGAKGVFLSLGKG----FASLMDEPETSNVLRHIENAVGSARDDVLI------ 681
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D + G + L A ++DL D L
Sbjct: 682 ---GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGV 738
Query: 550 GKDH 553
G H
Sbjct: 739 GYGH 742
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 51/371 (13%), Positives = 95/371 (25%), Gaps = 32/371 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ T D D+ G G + + LG G
Sbjct: 415 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLG-DDTLEGGAGN 473
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+G E+D + Y T + I A + G
Sbjct: 474 DWFGQTQAREHDVLR----------GGDGVDTVDYSQTGAHAGIAAGRIGLGILADLGAG 523
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ K+ + + ++ L + G + + + G E + +
Sbjct: 524 RVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVLLG 583
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------YLY 316
+ + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 584 GDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFSGPGRGLDAGAKG 643
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ L +E + + + ++L A + L G
Sbjct: 644 VFLSLGKGFASLMDEPETSNVLRHIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAG 703
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
DV + G D DL G D Y + E
Sbjct: 704 DDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGVGYGHDTIYESGG 750
Query: 437 PDAFKALEYIA 447
+ A
Sbjct: 751 GHDTIRINAGA 761
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/341 (13%), Positives = 81/341 (23%), Gaps = 46/341 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N +I + + G SG+D + G + N+ G + G +G D F
Sbjct: 157 IIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLG 216
Query: 313 SYLYKIYRFENAIIVYDA--------------------------------NEHKQDFLSD 340
+ ++ V N D + +
Sbjct: 217 VWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKN 276
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+E L + V + + L + + G D+ +G DI
Sbjct: 277 IENLHGSRLNDRIVGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQ 336
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
DD+ G D + + + +A
Sbjct: 337 DDE--TVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDY 394
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
++ ++ + +G D G G
Sbjct: 395 YDNVRNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGD------------GDDLLFG 442
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D L A ++ L D AG D F E
Sbjct: 443 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTQARE 483
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/365 (11%), Positives = 72/365 (19%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N I + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSRLNDRIVGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYYDNV 398
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+VE + Q + + + L G D+
Sbjct: 399 RNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 458
Query: 390 GLSEGRDITFDSYL------YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 459 YGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGRIGLGILA 518
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 519 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 576
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 577 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRD 626
Query: 564 SITFN 568
++ F+
Sbjct: 627 TVDFS 631
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 1/94 (1%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G + + + G +G+DV++G+ +++ +GND G G D
Sbjct: 673 GSARDDVLIGDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDD 732
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
T+ + IY D L
Sbjct: 733 TYLFGVGYGHDTIYE-SGGGHDTIRINAGADQLW 765
>gi|170740196|ref|YP_001768851.1| FG-GAP repeat-containing protein [Methylobacterium sp. 4-46]
gi|168194470|gb|ACA16417.1| FG-GAP repeat protein [Methylobacterium sp. 4-46]
Length = 861
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 71/354 (20%), Positives = 115/354 (32%), Gaps = 65/354 (18%)
Query: 45 TELNPNAQEVARWALGEWSKVVDLT-------------FEETSIHS--DIKFISSNNGYV 89
+ + +G WS V ++ F S S + I ++
Sbjct: 149 SNWTTTERNALISGMGLWSAVANIQFAQAASAATASFTFIRGSDGSAYENNGIVASAIGS 208
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTIL---SHNALHEIGHALGLMHPGSYNGGYPV 146
T + + I+ A G T +HE+GH +GL H G+YN G
Sbjct: 209 TTINNPTGAIISIDTSVAGFGPIGGSFDTYGGYPYQTLVHELGHLIGLGHGGAYN-GNVN 267
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC--------------------ATPMVS 186
D+ L ++MSY P D+ Y TPM
Sbjct: 268 SATQQFSAYDTRLWTLMSYIDPFDTSAKYYNQYPVTGTSWGTSPTNGLYYYREPTTPMFL 327
Query: 187 DIVAVQKIYGAPKGSLGNN-IYKIEVQQKD-----------SPFIQTIYDSGGDDLLDLT 234
DI+A Q+IYGAP S NN + + T++ +G + LDL+
Sbjct: 328 DILAAQQIYGAPTTSTLNNVTFGFNSTVPGLINQYFNFTVNQHPVVTLFATGASNTLDLS 387
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN-SANNVFFESS 293
I L +++S G N+ I T++ +G++G+D + N S +
Sbjct: 388 GWS-NGATISLTPGTFTSANGMINNIGIGPSTILTKAIGTTGSDTFLPNPSYVTTMTGNG 446
Query: 294 GN------------DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GN D + D + YR ++ Y
Sbjct: 447 GNDTFKSTMFGLSLDTITDFAQGDKIILTDGASSTFTYRHTGTVLAYGNGATSY 500
>gi|1706912|sp|P55126|FRPA_NEIMC RecName: Full=Iron-regulated protein frpA
gi|150255|gb|AAA25454.1| iron-regulated protein [Neisseria meningitidis]
Length = 1115
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/260 (17%), Positives = 88/260 (33%), Gaps = 15/260 (5%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 751 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 810
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYEN-----DSFLTSVMSYFMPQDSMMDASFGYCATPM- 184
+ + + ++ DS +V SYF S
Sbjct: 811 KDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 870
Query: 185 VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
V D+ V+++ + + G++ Y+ +Y + G+DLL+ G N
Sbjct: 871 VLDVATVKEL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLN----GDAGN 924
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ ++ G E N + + +++ G GND + G N+ +GND +G
Sbjct: 925 DSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGG 984
Query: 302 SGLDTFFYYAPSYLYKIYRF 321
SG DT+ + +Y +
Sbjct: 985 SGSDTYVFGEGFGQDTVYNY 1004
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 76/288 (26%), Gaps = 60/288 (20%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 756 GHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 815
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV- 354
+ V ++ ++ + F + + V
Sbjct: 816 FTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 875
Query: 355 --------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L S L +G D G D +Y G
Sbjct: 876 TVKELVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLNGDAGND-----SIYSG 930
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ +D + + Y +G + L ++ LI + G
Sbjct: 931 NGNDTLDGGEGNDAL----YGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 986
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
D + EG ++ D AA H+I G
Sbjct: 987 SDTYVFG---EGFGQDTVYNYHVDKNSDTM--HFKGFKAADVHFIRSG 1029
>gi|302875938|ref|YP_003844571.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578795|gb|ADL52807.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 820
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/434 (13%), Positives = 117/434 (26%), Gaps = 61/434 (14%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
D + + IG GTI+ + +G + +
Sbjct: 258 ADVIDGKGGNDYLNGGIDGDTYIFNIGYGTIVIDDYDETVGAIDTIKFGEGITIDRIGFI 317
Query: 149 VDNDYENDSFLTS---VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI--YGAPKGSLG 203
+ D S ++ + + + V D + + YG P
Sbjct: 318 RNLDDLEISIKNISDKLIIKNFYKSTSYEIEKFILNDGSVFDKNVIDSLMIYGTPS---- 373
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + I G+D + + + + + G N TI
Sbjct: 374 ------NDNISGTNLNEVIVAIEGNDTIYASGGDDTIYCGAGHDGVYDGVYGGLGNDTIY 427
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G G D++ G ++ F G+D G SG D + S Y
Sbjct: 428 GEGDNDRLSGQEGADILDGGIGSDTLFGGVGDDKLIGGSGNDGLYGEGGSDTYIFGSGFG 487
Query: 324 AIIVYDANEHKQDFLS------------------------------------------DV 341
A + + + D + +
Sbjct: 488 ADGISELDTVNTDIDTIEFVDGITKDNIDLKREMYDLIISVKGTNDSIRISNQFYGNSKI 547
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E +F+D + + + + TAS +++ +V +++ S G D +
Sbjct: 548 EVFKFSDGTVLDNEILKTLTIYGTASNDNISGTNLNEVIVAIEGNDTIYASGGDDTIYCG 607
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF----KALEYIASHEDLINAFA 457
+ G YD + G+D +EG + L + LI
Sbjct: 608 AGHDGVYDGVYGGLGNDTIYGEGDNDRLSGQEGADILDGGIGSDTLFGGVGDDKLIGGSG 667
Query: 458 DAPDLVQVGKDHFS 471
+ + G D +
Sbjct: 668 NDGLYGEGGNDTYI 681
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/319 (12%), Positives = 87/319 (27%), Gaps = 14/319 (4%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA-LG 133
+ I T I D G T + + G + L
Sbjct: 436 SGQEGADILDGGIGSDTLFGGVGDDKLIGGSGNDGLYGEGGSDTYIFGSGFGADGISELD 495
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
++ + ++ + + ++ + + S + +
Sbjct: 496 TVNTDIDTIEFVDGITKDNIDLKREMYDLIISVKGTNDSIRISNQFYGNSKIEVFKFSDG 555
Query: 194 IYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ IY + + I G+D + + + +
Sbjct: 556 TVLDNEILKTLTIYGTASNDNISGTNLNEVIVAIEGNDTIYASGGDDTIYCGAGHDGVYD 615
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N TI + + G G D++ G ++ F G+D G SG D
Sbjct: 616 GVYGGLGNDTIYGEGDNDRLSGQEGADILDGGIGSDTLFGGVGDDKLIGGSGND------ 669
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+Y D + +V L D + +V ++ + +
Sbjct: 670 -----GLYGEGGNDTYIFNKGDGADIVYNVSSLDNDDDRLLFNDVNFAEATITKSNADLI 724
Query: 372 IQVIGQDVFESMKHFYEFG 390
I++ G ++ F+ +G
Sbjct: 725 IKLNGTTDSVTVSGFFNYG 743
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 75/263 (28%), Gaps = 38/263 (14%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + I S+VGS G D + G +V GND +G DT+ +
Sbjct: 223 SYYTYVTGSGVIEGTIGKNSIVGSIGEDKIYGYFGADVIDGKGGNDYLNGGIDGDTYIFN 282
Query: 311 APSYLYKIYRFENAIIVYDANEHKQD---------------------------------- 336
I ++ + D + +
Sbjct: 283 IGYGTIVIDDYDETVGAIDTIKFGEGITIDRIGFIRNLDDLEISIKNISDKLIIKNFYKS 342
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
++E+ D + NV ++ T S +++ +V +++ S G D
Sbjct: 343 TSYEIEKFILNDGSVFDKNVIDSLMIYGTPSNDNISGTNLNEVIVAIEGNDTIYASGGDD 402
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF----KALEYIASHEDL 452
+ + G YD + G+D +EG + L + L
Sbjct: 403 TIYCGAGHDGVYDGVYGGLGNDTIYGEGDNDRLSGQEGADILDGGIGSDTLFGGVGDDKL 462
Query: 453 INAFADAPDLVQVGKDHFSNFGC 475
I + + G D +
Sbjct: 463 IGGSGNDGLYGEGGSDTYIFGSG 485
>gi|149184366|ref|ZP_01862684.1| calcium-binding protein [Erythrobacter sp. SD-21]
gi|148831686|gb|EDL50119.1| calcium-binding protein [Erythrobacter sp. SD-21]
Length = 1015
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 68/518 (13%), Positives = 129/518 (24%), Gaps = 33/518 (6%)
Query: 56 RWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG 115
+ +L +V+ F++ S R + D+ G G
Sbjct: 345 KDSLRSIERVIGSDFDDLMHGSGADDTFHGGAGSDELRGGKGSDVLFGEASDDIVCGGDG 404
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
+ + G G+ + V+S + D
Sbjct: 405 NDVLGGGYGDDFLEGGRG-DDEIRGGWGFDTASYTDAGAGVQVKLWVLSSQDTLGAGFDT 463
Query: 176 --SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDL 230
S + D++ + +G G+++ K + GG D+
Sbjct: 464 LSSIENISGSQFGDVLVGDFTFNIIEGLSGDDLIKGLDGNDVLWGGHGNDQLEGGGGSDV 523
Query: 231 L--------------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
L L GG + + G + I + + G G
Sbjct: 524 LRGGEGADLLLGGEGIDYLFGGTSSDFLKGGNGNDQLYGEAGDDIIEGGLHDDVLYGLDG 583
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND + G N++ F +G+D+ DG G DT Y S + + + +D
Sbjct: 584 NDSLDGGGDNDILFGGTGDDLLDGGYGFDTVDYSGASSAITL-----RWRIVHSQSEGKD 638
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
L +E++ + ++L ++L G D+ +G D
Sbjct: 639 TLRSIEQVIGSAFDDVLYGSVADNMLHGGGGSDELRGGEGSDLLFGEASDDVVYGGDGND 698
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
+ D L G D + T ++ K +
Sbjct: 699 VL----GGGYGNDLLEGGLGDDEINGGWGFDTVSYRDAGAGVQVKLWVLSSQDTLGAGFD 754
Query: 457 ADAP--DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ ++ L D ++G D G
Sbjct: 755 LLSSIENVTGSQFGDMLVGDSSSNILNGLSGDDVLKGLDGNDGLWGEDGNDLLE--GGLG 812
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
R + L + L G D
Sbjct: 813 NDVLRGGEGADFLLGGQGKDTLFGGLGSDFLKGGNGND 850
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/358 (16%), Positives = 97/358 (27%), Gaps = 64/358 (17%)
Query: 221 TIYDSGGDDLLDLT--LIGGVKNYIDLNTESWSSIGGYEKNMTI---------------A 263
TIY GGDDL +L G + ++L + +I N T+
Sbjct: 212 TIYGGGGDDLYNLVYGGWGFFPDVVELEGGGYDTIRTSALNFTLPDNIERIIGMNTEARI 271
Query: 264 QHTVIESVV-------GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
++V+ G +G+D + G ++ SG+D G G DT Y A +
Sbjct: 272 TGNSSDNVIFGGRYMWGGAGDDEIYGRGGDDFMAGGSGDDFLHGGYGFDTVDYSASTSAI 331
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + + +D L +ER+ +D A ++L G
Sbjct: 332 SL-----RWRIVYSESEGKDSLRSIERVIGSDFDDLMHGSGADDTFHGGAGSDELRGGKG 386
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
DV +G D+ G DD G E R
Sbjct: 387 SDVLFGEASDDIVCGGDGNDVL-----GGGYGDDFLEG-------------GRGDDEIRG 428
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG--SYDD 494
F Y + + ++ FD+ + S
Sbjct: 429 GWGFDTASYTDAGAGVQV--------------KLWVLSSQDTLGAGFDTLSSIENISGSQ 474
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+V D G + D L ++ L G D
Sbjct: 475 FGDVLVGDFTFNIIE-GLSGDDLIKGLDGNDVLWGGHGNDQLEGGGGSDVLRGGEGAD 531
>gi|254463018|ref|ZP_05076434.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
HTCC2083]
gi|206679607|gb|EDZ44094.1| hemolysin-type calcium-binding region [Rhodobacteraceae bacterium
HTCC2083]
Length = 719
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 81/291 (27%), Gaps = 33/291 (11%)
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
+ N+ A +R I G + G G + V + +
Sbjct: 92 IGDPNYATASNYRLEILAGNTVVGTLN---GTTDGTDALSTATVISSSPKVALNDLAVTI 148
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
+ S + + +A Y +++ + G G +
Sbjct: 149 RITKTSGAGQEIHIDNAQASYA-------LLSNGIVEGTNAGQSMGIGFVDTDGDIIDGT 201
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+I +GG+D +D ++ G N TI ++V G +GND
Sbjct: 202 DDSIQGNGGNDTIDA-------------GAGDDTVDGGTGNDTINAGVGDDTVDGGTGND 248
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ ++ +GND+ + G DT + I+ A + D
Sbjct: 249 TINAGVGDDTVDGGTGNDIINAGVGDDTV--DGGTGNDIIHGGNGADTI--------DGG 298
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + + + A + ++ D + +
Sbjct: 299 TGNDFINAGAGNDSVDGGTGNDTINAGADNDTIVASTDTDTIDGGDGADTY 349
Score = 47.1 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 8/145 (5%), Positives = 27/145 (18%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
++ ++ + + +G D + G D
Sbjct: 205 IQGNGGNDTIDAGAGDDTVDGGTGNDTINAGVGDDTVDGGTGNDTINAGVGDDTVDGGTG 264
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
+ + + +G + A ++ + +
Sbjct: 265 NDIINAGVGDDTVDGGTGNDIIHGGNGADTIDGGTGNDFINAGAGNDSVDGGTGNDTINA 324
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLY 488
D + + Y
Sbjct: 325 GADNDTIVASTDTDTIDGGDGADTY 349
Score = 37.8 bits (86), Expect = 6.5, Method: Composition-based stats.
Identities = 13/146 (8%), Positives = 31/146 (21%), Gaps = 13/146 (8%)
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
++ + + G D + G D D + G D
Sbjct: 204 SIQGNGGNDTIDAGAGDDTVDGGTGNDTINAGVGDDTV----DGGTGNDTINAGVGDDTV 259
Query: 421 AAARH---YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ + + + + D I+ + + + G
Sbjct: 260 DGGTGNDIINAGVGDDTVDGGTGNDIIHGGNGADTIDGGTGNDFINAGAGNDSVDGG--- 316
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDR 503
D+ D + +D
Sbjct: 317 ---TGNDTINAGADNDTIVASTDTDT 339
>gi|237799700|ref|ZP_04588161.1| glycosyl transferase group 1 [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331022555|gb|EGI02612.1| glycosyl transferase group 1 [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 473
Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/223 (21%), Positives = 78/223 (34%), Gaps = 48/223 (21%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-------------NPDAFKAL 443
F + YL D+ + A+HY+ G EGR + F +
Sbjct: 6 FDFSAVEYLRLNPDVASA----DMHPAQHYLDFGRAEGRRYQDISIDKQQLRSLGIFDSE 61
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGS 501
Y++ + D+ +A D +HF GC EGR+ + F S Y+ + D + +
Sbjct: 62 FYMSENPDVASAGLDPA-------EHFLTGGCAEGRWASLFFRSNWYMDCHPDSKLHPKN 114
Query: 502 DRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
HY G + G P+ F+ Y A + ++ HF G E
Sbjct: 115 ----CLFHYSEIGSRLGYEPNPFFEPEYYSAKY---KQHIG-----LEEPLAHFIKHGKE 162
Query: 561 E-GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
S F+ Y + S +HY+ GM+ G
Sbjct: 163 GFNPSPRFDSAAY------IKTTGCS--ENPLKHYLQTGMQAG 197
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/218 (21%), Positives = 69/218 (31%), Gaps = 50/218 (22%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--------------ITFDSYLY 404
S +EY D+ +H+ +FG +EGR FDS Y
Sbjct: 8 FSAVEYLRLNPDVASAD----MHPAQHYLDFGRAEGRRYQDISIDKQQLRSLGIFDSEFY 63
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFADAPDLV 463
+ D+ + A H++T G EGR F++ Y+ H D
Sbjct: 64 MSENPDVASA----GLDPAEHFLTGGCAEGRWASLFFRSNWYMDCHPDSK-------LHP 112
Query: 464 QVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
+ H+S G G F+ Y Y H+I HG KEG NP
Sbjct: 113 KNCLFHYSEIGSRLGYEPNPFFEPEYYSAKYKQHI-----GLEEPLAHFIKHG-KEGFNP 166
Query: 522 DA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
F + YI + + H+ G
Sbjct: 167 SPRFDSAAYIKT-----------TGCSENPLKHYLQTG 193
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 25/103 (24%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--------------S 564
R P F A+EY+ + D+ +A H+ +FG EGR
Sbjct: 3 RLPFDFSAVEYLRLNPDVASAD-------MHPAQHYLDFGRAEGRRYQDISIDKQQLRSL 55
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
F+ + Y++ D+ S A+H++T G EGR +
Sbjct: 56 GIFDSEFYMSENPDV----ASAGLDPAEHFLTGGCAEGRWASL 94
>gi|257058814|ref|YP_003136702.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8802]
gi|256588980|gb|ACU99866.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8802]
Length = 1152
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 18/124 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ Y D++ HY+ G +G++P+ F Y+ + ++
Sbjct: 451 FDTGYYWQQNPDVKLS----NVDPLGHYLDIGASQGKDPNPLFDTSFYLEQYPEV-TQLG 505
Query: 542 DAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
P H+ G ++G F+ YL Y D+ + HY+T G+
Sbjct: 506 MNPL------AHYIMIGAKKGNKPHPLFDTTYYLEQYPDVVEL----GINPLLHYLTIGL 555
Query: 600 KEGR 603
+E R
Sbjct: 556 EENR 559
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 21/132 (15%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
F Y + D+ + D H+ + G +G+ FD+ YL Y +
Sbjct: 448 SGLFDTGYYWQQNPDVKLSNVDP-------LGHYLDIGASQGKDPNPLFDTSFYLEQYPE 500
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ + + HYI G K+G P F Y+ + D++ P L H
Sbjct: 501 VTQLGMN----PLAHYIMIGAKKGNKPHPLFDTTYYLEQYPDVVE-LGINPLL------H 549
Query: 554 FSNFGYEEGRSI 565
+ G EE R
Sbjct: 550 YLTIGLEENRHP 561
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ Y D++ HY+ G +G++P+ F Y+ + ++
Sbjct: 450 LFDTGYYWQQNPDVKLSN----VDPLGHYLDIGASQGKDPNPLFDTSFYLEQYPEVTQLG 505
Query: 457 ADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ H+ G ++G FD+ YL Y D+ + + HY+T G
Sbjct: 506 MNP-------LAHYIMIGAKKGNKPHPLFDTTYYLEQYPDVVELGIN----PLLHYLTIG 554
Query: 515 VKEGRNP 521
++E R+P
Sbjct: 555 LEENRHP 561
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 51/136 (37%), Gaps = 19/136 (13%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLG 406
I S + + + + + + + + + H+ + G S+G+D FD+ YL
Sbjct: 442 AQIISKSGLFDTGYYWQQNPDVKLSNV-----DPLGHYLDIGASQGKDPNPLFDTSFYLE 496
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQV 465
Y ++ + HYI G K+G P F Y+ + D++ +
Sbjct: 497 QYPEVTQL----GMNPLAHYIMIGAKKGNKPHPLFDTTYYLEQYPDVVELGINPLL---- 548
Query: 466 GKDHFSNFGCEEGRFV 481
H+ G EE R
Sbjct: 549 ---HYLTIGLEENRHP 561
>gi|218245768|ref|YP_002371139.1| family 2 glycosyl transferase [Cyanothece sp. PCC 8801]
gi|218166246|gb|ACK64983.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8801]
Length = 1152
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 18/124 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ Y D++ HY+ G +G++P+ F Y+ + ++
Sbjct: 451 FDTGYYWQQNPDVKLS----NVDPLGHYLDIGASQGKDPNPLFDTSFYLEQYPEV-TQLG 505
Query: 542 DAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
P H+ G ++G F+ YL Y D+ + HY+T G+
Sbjct: 506 MNPL------AHYIMIGAKKGNKPHPLFDTTYYLEQYPDVVEL----GINPLLHYLTIGL 555
Query: 600 KEGR 603
+E R
Sbjct: 556 EENR 559
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 21/132 (15%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
F Y + D+ + D H+ + G +G+ FD+ YL Y +
Sbjct: 448 SGLFDTGYYWQQNPDVKLSNVDP-------LGHYLDIGASQGKDPNPLFDTSFYLEQYPE 500
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ + + HYI G K+G P F Y+ + D++ P L H
Sbjct: 501 VTQLGMN----PLAHYIMIGAKKGNKPHPLFDTTYYLEQYPDVVE-LGINPLL------H 549
Query: 554 FSNFGYEEGRSI 565
+ G EE R
Sbjct: 550 YLTIGLEENRHP 561
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 18/127 (14%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ Y D++ HY+ G +G++P+ F Y+ + ++
Sbjct: 450 LFDTGYYWQQNPDVKLSN----VDPLGHYLDIGASQGKDPNPLFDTSFYLEQYPEVTQLG 505
Query: 457 ADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ H+ G ++G FD+ YL Y D+ + + HY+T G
Sbjct: 506 MNP-------LAHYIMIGAKKGNKPHPLFDTTYYLEQYPDVVELGIN----PLLHYLTIG 554
Query: 515 VKEGRNP 521
++E R+P
Sbjct: 555 LEENRHP 561
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 51/136 (37%), Gaps = 19/136 (13%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLG 406
I S + + + + + + + + + H+ + G S+G+D FD+ YL
Sbjct: 442 AQIISKSGLFDTGYYWQQNPDVKLSNV-----DPLGHYLDIGASQGKDPNPLFDTSFYLE 496
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQV 465
Y ++ + HYI G K+G P F Y+ + D++ +
Sbjct: 497 QYPEVTQL----GMNPLAHYIMIGAKKGNKPHPLFDTTYYLEQYPDVVELGINPLL---- 548
Query: 466 GKDHFSNFGCEEGRFV 481
H+ G EE R
Sbjct: 549 ---HYLTIGLEENRHP 561
>gi|148242014|ref|YP_001227171.1| hypothetical protein SynRCC307_0915 [Synechococcus sp. RCC307]
gi|147850324|emb|CAK27818.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 1915
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/335 (12%), Positives = 89/335 (26%), Gaps = 22/335 (6%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G N T+ + + G +D + G + ++ G D DG +G DT+
Sbjct: 1512 GDDRLYGGYGNDTLNGGDGNDEIYGEMDDDKLYGGNGDDRLTGGDGADYLDGGNGSDTYI 1571
Query: 309 YYAPSYLYKIYRFENA--IIVYDANEHKQDFLSDVERLRFAD----QCIDSVNVKQRSIL 362
++ ++Y +E++ + + +
Sbjct: 1572 VDDERDTIVDSGTDSGIDTVIYRYYSKSYSLTKGIEKIVLPTSVKLSSMKITGNASHNSI 1631
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI------------TFDSYLYLGSYDD 410
E + L G D+ + GRD + G D
Sbjct: 1632 ETGDKNDILEGGAGNDLLNAALGDDTINGGSGRDTAQFSGRNNCINLNTTKWQNTGDGRD 1691
Query: 411 -LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
L ++ + G+ + N Y + D++ L
Sbjct: 1692 RLISIENVNAGSGNDIVKGNRSANTLNGQNGDDKLYGGNGNDVMYGGNHNDYLHGGSGTD 1751
Query: 470 FSNFGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH-GVKEGRNPDAFKA 526
+ F R + D L ++ + G+ + G +
Sbjct: 1752 TAQFSGRSNRINLNSTRWQNTRDGRDRLISIENVNAGSGNDVVTGNRGANTLNGQNGNDV 1811
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
L + ++ L+ + + G D G +
Sbjct: 1812 LNGGSGNDKLVGGQGNDKLVGGQGNDKLWGQGGRD 1846
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 71/234 (30%), Gaps = 13/234 (5%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG-HALGLMHPGSY-NGGYPVYGVDN 151
+ + D G G+ T + I + + G + + V+
Sbjct: 1642 GGAGNDLLNAALGDDTINGGSGRDTAQFSGRNNCINLNTTKWQNTGDGRDRLISIENVNA 1701
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
ND + + + + D +G ++ ++G G + +
Sbjct: 1702 GSGNDIVKGNRSANTLNGQNGDDKLYGGNGNDVMYGGNHNDYLHGG----SGTDTAQFSG 1757
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNMTIAQHTVIES 270
+ T + + + + ++N + G T+ +
Sbjct: 1758 RSNRINLNSTRWQN------TRDGRDRLISIENVNAGSGNDVVTGNRGANTLNGQNGNDV 1811
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ G SGND ++G N+ GND G G DTF + +I F N
Sbjct: 1812 LNGGSGNDKLVGGQGNDKLVGGQGNDKLWGQGGRDTFVLSEGAGYDRIMDFRNG 1865
Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 82/510 (16%), Positives = 148/510 (29%), Gaps = 54/510 (10%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
FE + N + + D + G G + +
Sbjct: 856 DFEHVKGSDTADTMVGN-ALANKLYGNGGNDVIDGGAGNDDIQGGTGDDVLKGGTGNDSL 914
Query: 129 GHALGLMHPGSYNGGYPVY-GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
G G V G ND S ++ D+ SF T
Sbjct: 915 SGGDGADRIDGGTGNDTVDCGGGNDVMLASVGNDTCTFGSGYDTADYTSFYRDIT----- 969
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLTLIGGVKNYIDLN 246
+ K KG LG + +K F+++I + +D +D + ++L+
Sbjct: 970 ---LVKGGSVNKGGLGTDTFK--------DFVESIKATTRANDWIDASTGNTANVDVNLS 1018
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++S G + E V GS GND + G+S N+ + GNDV S+G DT
Sbjct: 1019 SQSLKVSGLPKVGTFTFNVQNFEHVKGSEGNDRIQGDSKANILIGNGGNDVMTASAGNDT 1078
Query: 307 FFYYAPSYLYKIYRFENA-----IIVYDANEHKQDFLSDV-ERLRFA----DQCIDSVNV 356
+ + + + D +D +D E ++ + D
Sbjct: 1079 YTFGSGYDTIDYSSLGQSIRLVRGGTVDKGGQGKDTFTDFYESIKASTDSGDWIDGITGG 1138
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ L + + L + + F +G D T GS LR G
Sbjct: 1139 GAIASLNADLANQSLTISNLPGIGTVSVNVQNFENIDGSDTTDRLKGDSGSNI-LRGNGG 1197
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF--- 473
+D A+ T+ G ++Y + + + GKD F++F
Sbjct: 1198 NDVMLASAGNDTYTFGSG-----SDTIDYSSLGQAITLNKGGTVSKGSAGKDTFTDFFET 1252
Query: 474 -----------GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
G + D+ L +++ R +
Sbjct: 1253 IRASSGSNDWIDGSGGTTASIDANLASQKLSIKGIPGLGTVNTTVQNFENV-----RGTN 1307
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ + + LI + G+D
Sbjct: 1308 YNDTIAGDSGNNILIGDGGNDTISTGGGRD 1337
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 61/389 (15%), Positives = 100/389 (25%), Gaps = 59/389 (15%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
D+ + L L G N + I G + + T +S+ G G D + G
Sbjct: 866 ADTMVGNALANKLYGNGGNDVIDGGAGNDDIQGGTGDDVLKGGTGNDSLSGGDGADRIDG 925
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-----KQDF 337
+ N+ GNDV S G DT + + F I + D
Sbjct: 926 GTGNDTVDCGGGNDVMLASVGNDTCTFGSGYDTADYTSFYRDITLVKGGSVNKGGLGTDT 985
Query: 338 LSD-VERLRFADQCIDSVNVK--------------------------------------- 357
D VE ++ + D ++
Sbjct: 986 FKDFVESIKATTRANDWIDASTGNTANVDVNLSSQSLKVSGLPKVGTFTFNVQNFEHVKG 1045
Query: 358 --QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT------FDSYLYLGSYD 409
++ + LI G DV + + G D L G
Sbjct: 1046 SEGNDRIQGDSKANILIGNGGNDVMTASAGNDTYTFGSGYDTIDYSSLGQSIRLVRGGTV 1105
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
D + + DL N +L +G
Sbjct: 1106 DKGGQGKDTFTDFYESIKASTDSGDWIDGITGGGAIASLNADLANQSLTISNLPGIGTVS 1165
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDD-LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
+ E L S + LR G+D A+ T+ G ++
Sbjct: 1166 VNVQNFENIDGSDTTDRLKGDSGSNILRGNGGNDVMLASAGNDTYTFGSGS-----DTID 1220
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNF 557
Y + + + AGKD F++F
Sbjct: 1221 YSSLGQAITLNKGGTVSKGSAGKDTFTDF 1249
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 71/503 (14%), Positives = 134/503 (26%), Gaps = 56/503 (11%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
K ++ DS +++ + + +
Sbjct: 1105 VDKGGQGKDTFTDFYESIKASTDSGDWIDGITGGGAIASLNADLANQSLTISN---LPGI 1161
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS-DIVAV 191
G + N D ++++ D M+ ++ T D +
Sbjct: 1162 GTVSVNVQNFENIDGSDTTDRLKGDSGSNILRGNGGNDVMLASAGNDTYTFGSGSDTIDY 1221
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKD-SPFIQTIYDSGG-DDLLDLTLIGGVKNYIDLNTES 249
+ A + G + K + + F +TI S G +D +D + +L ++
Sbjct: 1222 SSLGQAITLNKGGTVSKGSAGKDTFTDFFETIRASSGSNDWIDGSGGTTASIDANLASQK 1281
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DG 300
S G E+V G++ ND + G+S NN+ GND D
Sbjct: 1282 LSIKGIPGLGTVNTTVQNFENVRGTNYNDTIAGDSGNNILIGDGGNDTISTGGGRDSVDA 1341
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
SG DT + S + + F S+ +
Sbjct: 1342 GSGNDTI----------------TVTSAQGGSSSVTTGSGQDTVVFTKGYYQSLFYGGAA 1385
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLS-EGRDITFDSYLYLGSYD-------DLR 412
L T D +G D+ + + F + + +G + + YL D
Sbjct: 1386 ALTIT----DFTTGVGGDLLDLSQLFRDVAVGFDGSNPFLNGYLDFVKSGTDMQLQFDAD 1441
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
F + A + + + + F I ++ G+ ++
Sbjct: 1442 GAFDTAFSAKTIALLKNTKRTDLDKSNFNPAYEIPPPIIQGTNRSEKITGSDEGEWIYAY 1501
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
G + D LY G +D N G E L
Sbjct: 1502 NGFDTVEAKEGDDRLYGGYGNDTLN-------------GGDGNDEIYGEMDDDKLYGGNG 1548
Query: 533 HEDLINAFADAPDLVQAGKDHFS 555
+ L G D +
Sbjct: 1549 DDRLTGGDGADYLDGGNGSDTYI 1571
>gi|85703682|ref|ZP_01034786.1| Hemolysin-type calcium-binding region, RTX [Roseovarius sp. 217]
gi|85672610|gb|EAQ27467.1| Hemolysin-type calcium-binding region, RTX [Roseovarius sp. 217]
Length = 576
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 58/373 (15%), Positives = 99/373 (26%), Gaps = 24/373 (6%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
I LN + +S+ + I + + G G D + G N+V
Sbjct: 147 TQGAFAPNQPISLNDFANASVSELSADELIIGTNGPDFLTGDDGQDTIEGRGGNDVLNGG 206
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
G+D+ DG G DT Y S + + + D L ++E++ F DQ +
Sbjct: 207 EGDDLLDGGEGFDTATYNVGSRNEFQFTLTETGLRIASPNDGVDDLVNIEQVEFLDQTVL 266
Query: 353 SVNVK---------------QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
++ ++ TA + LI G D F G D
Sbjct: 267 VSDLIEEIVGRPGVFLVAEEVDAVFTGTADNDTLIGSEGNDFLGGGLGNDSFEGGGGNDS 326
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
S ++ N G ++ A ++ +
Sbjct: 327 IAASDGNDLAFGGTGNDNIGGGVGNDTLDGNEGDDTIGGGFGADSVSGGAGNDVVAGGAG 386
Query: 458 DAPDLVQVGKDHF-SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
D G D+ +FG + + G+ D + D G
Sbjct: 387 DDTLEGGEGNDNMSGSFGNDSIDAGDGAEDIGGGTGRDTIDAGAGDDRVG----GGEGND 442
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSY 576
D L + L + AG D G + F +
Sbjct: 443 SILGGDGNDFLAGGGRDDTLNGGAGNDTINAGAGND--VITGGADADQFVF--SSFFDGE 498
Query: 577 DDLWNVFGSDRSA 589
D+ F
Sbjct: 499 ADVITDFEDSIDR 511
>gi|113476747|ref|YP_722808.1| hypothetical protein Tery_3216 [Trichodesmium erythraeum IMS101]
gi|110167795|gb|ABG52335.1| hypothetical protein Tery_3216 [Trichodesmium erythraeum IMS101]
Length = 595
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 59/352 (16%), Positives = 93/352 (26%), Gaps = 31/352 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ S I GGDD L G N E ++ G+ + +I +
Sbjct: 19 GGNDKAYGSSGNDIIEGKGGDDEL----YGNGGNDTIKGEEGDDTVLGHPGDDSIEGNAG 74
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYR 320
+ + G G+D+V G N++ GND +G G D + K+Y
Sbjct: 75 DDKLYGGDGDDLVSGGEGNDMQTGGGGNDTIEGGEGDDKLYGGPDDDLIKGEDGQDKLYG 134
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + + L + + G D+
Sbjct: 135 NDGNDAMEGGADDDT--------VLGHAGDDSIEGNAGDDKLYGGDGDDLVSGGEGNDMQ 186
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
EG D LY G DDL Y G
Sbjct: 187 TGGGGNDTIEGGEG-----DDKLYGGPDDDLIKGEDGQDKL----YGNDGNDAMEGGADD 237
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
+ A + + D G D S + + + G D + G
Sbjct: 238 DTVLGHAGDDSIEGNAGDDKLYGGDGDDLVSGGEGNDMQTGGGGNDTIEGGEGDDKLYGG 297
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D G E D A+E A + ++ D AG D
Sbjct: 298 PDDDLIK---GEDGQDELYGNDGNDAMEGGADDDTVLGHAGDDSIEGNAGDD 346
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/349 (13%), Positives = 99/349 (28%), Gaps = 27/349 (7%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ GG+D + D L GG + + + + G + N +
Sbjct: 83 GDDLVSGGEGNDMQTGGGGNDTIEGGEGDDKLYGGPDDDLIKGEDGQDKLYGNDGNDAME 142
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++V+G +G+D + GN+ ++ + G+D+ G G D I E
Sbjct: 143 GGADDDTVLGHAGDDSIEGNAGDDKLYGGDGDDLVSGGEGNDM--QTGGGGNDTIEGGEG 200
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+Y + ++ D +E A + ++ G D E
Sbjct: 201 DDKLYGGPDDD--------LIKGEDGQDKLYGNDGNDAMEGGADDDTVLGHAGDDSIEGN 252
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ +G D+ + G +D++ G + G + +
Sbjct: 253 AGDDKLYGGDGDDL-----VSGGEGNDMQTGGGGNDTIE----GGEGDDKLYGGPDDDLI 303
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ ++L + D ++ L G D G
Sbjct: 304 KGEDGQDELYGNDGNDAMEGGADDDTVLGHAGDDSIEGNAGDDLLSGDSGDDVVSGGEGE 363
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
Y G E D ++ + L + + G+D
Sbjct: 364 DIL---YGGAGNDELYGGDDNDTIDDGGGDDILEGNTGNDILRGRGGQD 409
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 53/410 (12%), Positives = 98/410 (23%), Gaps = 38/410 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + S + D G I + ++ G
Sbjct: 79 YGGDGDDLVSGGEGNDMQTGGGGNDTIEGGEGDDKLYGGPDDDLIKGEDGQDKLYGNDGN 138
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
V G D + Y D ++ G +Q
Sbjct: 139 DAMEGGADDDTVLGHAGDDSIEGNAGDDKLYGGDGDDLVSGGEG----------NDMQTG 188
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G G + + + P I G D L G N ++
Sbjct: 189 GGGNDTIEGG---EGDDKLYGGPDDDLIKGEDGQDKL----YGNDGNDAMEGGADDDTVL 241
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------ 308
G+ + +I + + + G G+D+V G N++ GND +G G D +
Sbjct: 242 GHAGDDSIEGNAGDDKLYGGDGDDLVSGGEGNDMQTGGGGNDTIEGGEGDDKLYGGPDDD 301
Query: 309 -YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
++Y + + + + +L +
Sbjct: 302 LIKGEDGQDELYGNDGNDAMEGGADDDT--------VLGHAGDDSIEGNAGDDLLSGDSG 353
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ + G+D+ E + D D + N RG
Sbjct: 354 DDVVSGGEGEDILYGGAGNDELYGGDDNDTIDDGGGDDILEGNTGNDILRGRGGQDELIG 413
Query: 428 THG------VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
G + P+ + + D A+ G D F
Sbjct: 414 GDGDDLIISYSDAGEPEIAQQTNESKVYPDQPFFEANDTLTGGSGADTFL 463
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/408 (12%), Positives = 100/408 (24%), Gaps = 29/408 (7%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
NG T + + + D G + + + G G
Sbjct: 43 YGNGGNDTIKGEEGDDTVLGHPGDDSIEGNAGDDKLYGGDGDDLVSGGEGNDMQTGGGGN 102
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK--GS 201
+ G + D + + + + G A +D V G G+
Sbjct: 103 DTIEGGEGDDKLYGGPDDDLIKGEDGQDKLYGNDGNDAMEGGADDDTVLGHAGDDSIEGN 162
Query: 202 LGNNIYKI---EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSI 253
G++ + GG+D + D L GG + + + +
Sbjct: 163 AGDDKLYGGDGDDLVSGGEGNDMQTGGGGNDTIEGGEGDDKLYGGPDDDLIKGEDGQDKL 222
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N + ++V+G +G+D + GN+ ++ + G+D+ G G D
Sbjct: 223 YGNDGNDAMEGGADDDTVLGHAGDDSIEGNAGDDKLYGGDGDDLVSGGEGNDM--QTGGG 280
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
I E +Y + + L + +
Sbjct: 281 GNDTIEGGEGDDKLYGGPDDDL-----------------IKGEDGQDELYGNDGNDAMEG 323
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
D + G D+ Y
Sbjct: 324 GADDDTVLGHAGDDSIEGNAGDDLLSGDSGDDVVSGGEGEDILYGGAGNDELYGGDDNDT 383
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ LE ++ L + G D ++ +
Sbjct: 384 IDDGGGDDILEGNTGNDILRGRGGQDELIGGDGDDLIISYSDAGEPEI 431
>gi|149200754|ref|ZP_01877729.1| hypothetical protein RTM1035_14052 [Roseovarius sp. TM1035]
gi|149145087|gb|EDM33113.1| hypothetical protein RTM1035_14052 [Roseovarius sp. TM1035]
Length = 783
Score = 85.6 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 76/257 (29%), Gaps = 19/257 (7%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
++ GDD ++ GG + + + + G N I +++ G
Sbjct: 516 AGAGNDSVAGGAGDDTIE----GGSGDDVLAASAGNDVVLGEAGNDRIGGGLGDDTIDGG 571
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV------- 327
+G+DV+ N++ GND+ G +G DT + I + +
Sbjct: 572 AGDDVIGAGQGNDIVEGGDGNDLISGGAGDDTL--NGGADNDSISGSFGSDSIDAGAGDD 629
Query: 328 YDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+D + + + + + D + + ++ G D
Sbjct: 630 VIGGGAGRDTIEGGAGDDVIGGGEGDDDLFGSDGNDFIAGGGRNDFILGGAGDDTINGGA 689
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
EG D+ + GS++++ + R G+ G N
Sbjct: 690 GNDIMSGGEGADVFVFNEFVAGSFENITDFEAGVDTVFIR---VDGLDNGGNGLQGYLDA 746
Query: 445 YIASHEDLINAFADAPD 461
D F +
Sbjct: 747 LGIVDTDQGAQFTVNDN 763
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 54/246 (21%), Gaps = 32/246 (13%)
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + + E +E + + L G DV
Sbjct: 494 SALFSNGGSSLTTLSDAGELALAGAGNDSVAGGAGDDTIEGGSGDDVLAASAGNDVVLGE 553
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G G D G+ DD+ + G L
Sbjct: 554 AGNDRIGGGLGDDTI-----DGGAGDDVIGAGQGNDIVE----GGDGNDLISGGAGDDTL 604
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
A ++ + +F G D + + G D ++FGSD
Sbjct: 605 NGGADNDSISGSFGSDSIDAGAGDDVIGGGAGRDTIEGGAGDDVIGGGEGD-DDLFGSD- 662
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ ++ ++ D AG D G E
Sbjct: 663 -------------------GNDFIAGGGRNDFILGGAGDDTINGGAGND--IMSGGEGAD 701
Query: 564 SITFNP 569
FN
Sbjct: 702 VFVFNE 707
>gi|148264595|ref|YP_001231301.1| putative outer membrane adhesin like protein [Geobacter
uraniireducens Rf4]
gi|146398095|gb|ABQ26728.1| putative outer membrane adhesin like protein [Geobacter
uraniireducens Rf4]
Length = 3598
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 74/528 (14%), Positives = 123/528 (23%), Gaps = 68/528 (12%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
S S + D D G+G I I G
Sbjct: 1091 SGGAGNDYIDARSGNDVISGGDGNDTISAGLGDDIIDGGTGDDTIY---GTDSHYYDVAY 1147
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-- 201
++ Y Y + + + + SD+ +
Sbjct: 1148 DAPRNDNDTYLFGWGDGHDTIYNRNESLISSDTIRFKDGITASDVRFEGVLGYNEDLRIV 1207
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
LG+ I V+ + I S G N
Sbjct: 1208 LGDGTDSITVKNWFASAYYQIARM---------EFSDGTVLDAAYVASHLVKEGTAGNDV 1258
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I E++ G +G+D + G N+ SGND+ G G DT+ + Y
Sbjct: 1259 ILGSRQSETISGYAGDDTLYGGDGNDRLDGGSGNDMLAGGYGNDTYLFGRGDGHDTAYEG 1318
Query: 322 ENAIIVYDANEHKQ-----------------------------------DFLSD------ 340
+ + D +D
Sbjct: 1319 FGNGYYWVNSPDDAIEFKADVLPEDVIVRRLGNDMLLTIKGSDDQLTVKDTFNDYNESNR 1378
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+E+ RFAD I L+ T+ + L G DV + +G D
Sbjct: 1379 IEQARFADGTIWDYTTLLTLALQGTSDDDILEGGAGNDVLDGGAGNDLLRGRDGGDTYRF 1438
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYI---------THGVKEGRNPDAFKALEYIASHED 451
Y + G D I T+G + +L +
Sbjct: 1439 GRGYGNDVIEESGWGGVDTVEFQAGIIPSDLTFTIDTNGALLITIKGSGDSLRLSNGTYN 1498
Query: 452 LIN-AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
+ F++ L + + V L D + G +
Sbjct: 1499 IERYVFSNGTTLTSADINRLAATLPSAESIVGTAGDDILVGSDINSTILGLEGNDVLSGA 1558
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
EG L ++L D +G+D + G
Sbjct: 1559 DGDDWLEG--AAGNDTLAGNMGDDNLYGGDGDDVLNGGSGRD-YIEAG 1603
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 76/536 (14%), Positives = 140/536 (26%), Gaps = 54/536 (10%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
S ++ L + +D T + D DV G G+ I +
Sbjct: 1544 STILGLEGNDVLSGADGDDWLEGAAGNDTLAGNMGDDNLYGGDGDDVLNGGSGRDYIEAG 1603
Query: 123 NALHEIGHALGLMHPG------SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
N + I G +G + Y+ Q +
Sbjct: 1604 NGANVIRFEQGSGVDFVRTRLADGQADTIEFGAGITSADLQVQLGNQRYWDIQPGDSGYA 1663
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
T D ++ G +++ + ++ + +
Sbjct: 1664 TLVVGT---GDDAFRIEVDGWSTDISRSSVQRFRFNDGTELSLEQVIAMNDGGIAGWQS- 1719
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + I + + + I GY+ N I + + G +G+D++ G S N+ F+ SG+D
Sbjct: 1720 GFDGDDILVGSNADDDINGYDGNDAIRARAGNDYLNGGAGSDLMDGGSGNDYFYAGSGSD 1779
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS-DVERLRFADQCIDSVN 355
V G G DT + Y + IV D + + +S V + A +
Sbjct: 1780 VLAGGRGDDTLIGSSGEDTYLFNLGDGNDIVEDNWDGGRKTISFGVGIVPDAVSAMMDEY 1839
Query: 356 VKQRSILEYTASYE-DLIQVIGQDVFE-------------SMKH----FYEFGLSEGRDI 397
R +++ L++ QD + + GL G
Sbjct: 1840 GNLRLLVDGGVGGSLTLLRWFQQDRLTMQEPLTVERVQFVAADGSVRIYDLAGLVRGVAP 1899
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
S + + +D AA + L AS+
Sbjct: 1900 LLSSSTFTSPVALFADAASNDITLAA---LPADGDAAVAYAQSGNLFGTASYGASSVPTD 1956
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
L+ G D YL G
Sbjct: 1957 GDDRLMGTEWGDSLEGGAGNDLVYGLDGDDYLD--------------------GGSGHDR 1996
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYL 573
A+ + ++ ++ D G D +G + FN L
Sbjct: 1997 IDAGAGNDAIYGGSGNDLIMAGEGDDFVHAGTGND--IAYGGLGNDTFVFNAGDGL 2050
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/241 (13%), Positives = 66/241 (27%), Gaps = 45/241 (18%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
I G +++ TI +++ G GN++++G + N++ +G+D G +G D
Sbjct: 749 GGNGDDIILGDDQSRTIYGGNGNDTLFGGGGNEMLVGGNDNDIISGGAGDDQLRGEAGDD 808
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDF---------------------------- 337
+ + S I + + + + D
Sbjct: 809 QYIFGRGSGNDNIVDGQGRNSILFSGLNPGDITVTTPNSYNDDFVFSIKDTGETLHIAGG 868
Query: 338 -------LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI----------GQDVF 380
+ + R FAD + + + Y +DLI G D
Sbjct: 869 WNWYWYENTSINRFIFADGTVWNKENAINAATSYPTEGDDLIIGSRLTDSIDGLGGNDTI 928
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
G D+ S Y + A + I + +
Sbjct: 929 IGRSGDDVIDGGAGDDLLIGSAYAYNDYYTGAQRINATVVEANGNDIYYFGRGSGRDTII 988
Query: 441 K 441
Sbjct: 989 D 989
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 38/85 (44%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+L GG N + + + G + I +++ G SGND+++ ++ +
Sbjct: 1969 SLEGGAGNDLVYGLDGDDYLDGGSGHDRIDAGAGNDAIYGGSGNDLIMAGEGDDFVHAGT 2028
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKI 318
GND+ G G DTF + A L I
Sbjct: 2029 GNDIAYGGLGNDTFVFNAGDGLLTI 2053
Score = 50.6 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/272 (11%), Positives = 62/272 (22%), Gaps = 59/272 (21%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
I ++++G++ D + G +++ +G D G+ G DT+ + +
Sbjct: 2433 NGFEIRGTDGNDTLLGTATYDYIRGGDGDDLIISGTGGDYLRGTGGNDTYVFNRGDGEVE 2492
Query: 318 IYR-----------------------------------FENAIIVYDANEHKQDF---LS 339
I F+N +Y D
Sbjct: 2493 ISDFLEEGIGNVLRFGPGITPEDLRRHLRFEDGYFIIAFDNGDTIYLDGFDPNDVDNSPR 2552
Query: 340 DVERLRFADQC--------------------IDSVNVKQRSILEYTASYEDLIQVIGQDV 379
V+ F D L ++L G+DV
Sbjct: 2553 SVDTFAFDDGTTLSFAELARYTFVVEGDNLDNLLTGTNLDDRLYGYDGSDNLDSGTGEDV 2612
Query: 380 FESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
GRD F+ + + D + + + + +
Sbjct: 2613 LTGGTGTDVLLGGGGRDAYIFNLGDGVDTITDTAENGIGNILSFGQGITINDLSLSLTGT 2672
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+I F D F
Sbjct: 2673 TLTIGYGAYGDAVIIENFDPTGLNGTTVIDTF 2704
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 40/324 (12%), Positives = 79/324 (24%), Gaps = 48/324 (14%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D R + I+ D R G T + + E+ + L
Sbjct: 2439 GTDGNDTLLGTATYDYIRGGDGDDLIISGTGGDYLRGTGGNDTYVFNRGDGEVEISDFLE 2498
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ D Y
Sbjct: 2499 EGIGNVLRFGPGITPEDLRRHLRFEDG--------------------------------Y 2526
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ IY D D+ D G ++ +L ++ G
Sbjct: 2527 FIIAFDNGDTIYLDGFDPNDVDNSPRSVDTFAFD------DGTTLSFAELARYTFVVEGD 2580
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N+ + + + + G G+D + + +V +G DV G G D + + +
Sbjct: 2581 NLDNL-LTGTNLDDRLYGYDGSDNLDSGTGEDVLTGGTGTDVLLGGGGRDAYIFNLGDGV 2639
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
I I + + ++D+ L + +I+
Sbjct: 2640 DTITDTAENGIGNILSFGQGITINDL-SLSLTGTTLTIG--------YGAYGDAVIIENF 2690
Query: 376 GQDVFESMKHFYEFGLSEGRDITF 399
F S+G I++
Sbjct: 2691 DPTGLNGTTVIDTFEFSDGSAISY 2714
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 72/508 (14%), Positives = 142/508 (27%), Gaps = 46/508 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D+ G+G T + + +
Sbjct: 1998 DAGAGNDAIYGGSGNDLIMAGEGDDFVHAGTGNDIAYGGLGNDTFVFNAGDGLLTIEQDY 2057
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
M + + + + +++ G + + + +
Sbjct: 2058 MEYAGGGEYGGDLPMFASFASYGGDYGGGYGGGTESNVLSFGVGITLSDLRF---SERDG 2114
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
Y + ++ DSP + + DS + G V D+ SS+G
Sbjct: 2115 YLIIDIPSTGDQVRLAGYNPDSPTLTDVVDS------YVFADGSVATPQDILDAGLSSVG 2168
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ G++GN++V N+ GND G SG DT+ +
Sbjct: 2169 AEGDDYF----------TGTAGNNIVETGGGNDYLVGGFGNDRLMGGSGDDTYEFNLGDG 2218
Query: 315 LYKIYRFENAII---VYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ I F + + VY D + ++VE + D + + + +
Sbjct: 2219 VDTIVDFSSPGMENSVYFGYGISPDSIWTEVENGALVLRVGDGGDAIRFEGFDPNIP-DM 2277
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
V D ++ + LS G +I D L G DR
Sbjct: 2278 PQPVGRFDFWDGSSMSFSDLLSRGFEIVGTPEQ-----DTLIGTSGDDRIRGLASDDLLK 2332
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC--------------- 475
G + F+A + + S +D+ ++ G + +
Sbjct: 2333 GNAGDDTYLFQAGDGVDSIDDVSRPGEWNTVVLPDGMAPWEVYLTHDPEKGELVLKRWGS 2392
Query: 476 -EEGRFVTFDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
+E R FD G+ FG + + + + E R D L A++
Sbjct: 2393 DDEIRMTGFDRLDPFGNRAVEYFQFGQNGQIFSYDELLNLNGFEIRGTDGNDTLLGTATY 2452
Query: 534 EDLINAFADAPDLVQAGKDHFSNFGYEE 561
+ + D + G D+ G +
Sbjct: 2453 DYIRGGDGDDLIISGTGGDYLRGTGGND 2480
>gi|240143531|ref|ZP_04742132.1| VanW domain protein [Roseburia intestinalis L1-82]
gi|257204568|gb|EEV02853.1| VanW domain protein [Roseburia intestinalis L1-82]
Length = 293
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F A Y +++ D+ AF + A +HF N+G EGRS + FNP Y Y DL
Sbjct: 43 FDADYYRSAYPDVAAAFGNNK---AALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQ 99
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISGM 610
FG D +A +HY+T G EGR G +G
Sbjct: 100 AFGDDMAAYCRHYVTCGKAEGRDGGGTGS 128
Score = 81.0 bits (198), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ F Y A + DL AF
Sbjct: 43 FDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFG 102
Query: 542 DAPDLVQAGKDHFSNFGYEEGRS 564
D A H+ G EGR
Sbjct: 103 DDM---AAYCRHYVTCGKAEGRD 122
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDL 495
F A Y +++ D+ AF + +HF N+G EGR F+ Y Y DL
Sbjct: 41 AVFDADYYRSAYPDVAAAFGNN---KAALFNHFVNYGLREGRSCSADFNPQAYRAKYADL 97
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDA 523
+ FG D A RHY+T G EGR+
Sbjct: 98 QQAFGDDMAAYCRHYVTCGKAEGRDGGG 125
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYD 409
S Y ++Y D+ G + HF +GL EGR F+ Y Y
Sbjct: 36 RSAYQAVFDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYA 95
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
DL+ FG D A RHY+T G EGR+ ++
Sbjct: 96 DLQQAFGDDMAAYCRHYVTCGKAEGRDGGGTGSVS 130
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFA 457
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ F Y A + DL AF
Sbjct: 43 FDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFG 102
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT 482
D + H+ G EGR
Sbjct: 103 DD---MAAYCRHYVTCGKAEGRDGG 124
>gi|302383520|ref|YP_003819343.1| hypothetical protein Bresu_2411 [Brevundimonas subvibrioides ATCC
15264]
gi|302194148|gb|ADL01720.1| hypothetical protein Bresu_2411 [Brevundimonas subvibrioides ATCC
15264]
Length = 859
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 61/372 (16%), Positives = 108/372 (29%), Gaps = 34/372 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
++ + F T+ G+DL GG N + G + +A I
Sbjct: 386 LDDDLIGTAFADTLLLGRGNDL----GAGGSGNDSLYGEGGRDILLGGAGDDYLAGGADI 441
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G ND +IG + N+ +GND ++ + DT + ++ + N +
Sbjct: 442 DALYGDLDNDFLIGGAGNDYMAGGNGNDTYEVTDAGDTVMEISGEGSDVVFSYVNGYTLT 501
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
++VE+LR + ++L L G D F
Sbjct: 502 ----------ANVEQLRLVGGALTGSGNAGANVLVGNGLDNTLSGGAGNDTFYGGAGNDT 551
Query: 389 FGLSEGRDITF-------DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ ++E D+ D+ +Y NV A + +G+ +A
Sbjct: 552 YEVTETGDVVIENPGEGTDTIFSYVTYTLGANVENLRLVGGALNATGNGLGNQIVGNALS 611
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
+ D + EG Y Y+ +Y NV
Sbjct: 612 NVLIGGGGNDTMVGSGGNDVYEVTEVGDVVYEAAAEGTDT---VYSYIDTYQMSLNVETL 668
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
+ AR G + A L + G D F + G
Sbjct: 669 NLVGTARV--------GLGSAGNDTIVGNAQDNTLNGNGGNDILTGGTGVDQFWHLGASA 720
Query: 562 G--RSITFNPDL 571
G R F
Sbjct: 721 GQDRITDFAAAA 732
>gi|239787160|emb|CAQ64440.1| adenylate cyclase-hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 66/484 (13%), Positives = 119/484 (24%), Gaps = 47/484 (9%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D+ + G TI + LGL +G D
Sbjct: 282 GSRLNDRIAGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 341
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + +LG + Y
Sbjct: 342 SDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYY------ 395
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ ++ + + D+L G + + ++ G + + + + + G
Sbjct: 396 DNVRNVENVIGTSMKDVLI----GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYG 451
Query: 274 SSGNDVVIGNSANNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GND + G ++ +GND V G G+DT Y I
Sbjct: 452 DAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGR 511
Query: 323 NAIIVY------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + +A D +S +E + + Q ++L +
Sbjct: 512 IGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 571
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS-DRGAAARHYITH 429
L G DV + GRD + + D N D G
Sbjct: 572 LAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFS 631
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G G + A + A H N V
Sbjct: 632 GPGRGLDAGAKGVFLSLGKG----FASLMDEPETSNVLRHIENAVGSARDDVLI------ 681
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D + G + L A ++DL D L
Sbjct: 682 ---GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGV 738
Query: 550 GKDH 553
G H
Sbjct: 739 GYGH 742
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 51/371 (13%), Positives = 95/371 (25%), Gaps = 32/371 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ T D D+ G G + + LG G
Sbjct: 415 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLG-DDTLEGGAGN 473
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+G E+D + Y T + I A + G
Sbjct: 474 DWFGQTQAREHDVLR----------GGDGVDTVDYSQTGAHAGIAAGRIGLGILADLGAG 523
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ K+ + + ++ L + G + + + G E + +
Sbjct: 524 RVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVLLG 583
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------YLY 316
+ + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 584 GDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFSGPGRGLDAGAKG 643
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ L +E + + + ++L A + L G
Sbjct: 644 VFLSLGKGFASLMDEPETSNVLRHIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAG 703
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
DV + G D DL G D Y + E
Sbjct: 704 DDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGVGYGHDTIYESGG 750
Query: 437 PDAFKALEYIA 447
+ A
Sbjct: 751 GHDTIRINAGA 761
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/341 (13%), Positives = 80/341 (23%), Gaps = 46/341 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N +I + + G SG+D + G + N+ G + G +G D F
Sbjct: 157 IIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLG 216
Query: 313 SYLYKIYRFENAIIVYDA--------------------------------NEHKQDFLSD 340
+ ++ V N D + +
Sbjct: 217 VWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKN 276
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+E L + + + L + + G D+ +G DI
Sbjct: 277 IENLHGSRLNDRIAGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQ 336
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
DD+ G D + + + +A
Sbjct: 337 DDE--TVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDY 394
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
++ ++ + +G D G G
Sbjct: 395 YDNVRNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGD------------GDDLLFG 442
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D L A ++ L D AG D F E
Sbjct: 443 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTQARE 483
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/365 (11%), Positives = 73/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSRLNDRIAGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYYDNV 398
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+VE + Q + + + L G D+
Sbjct: 399 RNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 458
Query: 390 GLSEGRDITFDSYL------YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 459 YGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGRIGLGILA 518
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 519 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 576
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 577 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRD 626
Query: 564 SITFN 568
++ F+
Sbjct: 627 TVDFS 631
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 1/94 (1%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G + + + G +G+DV++G+ +++ +GND G G D
Sbjct: 673 GSARDDVLIGDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDD 732
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
T+ + IY D L
Sbjct: 733 TYLFGVGYGHDTIYE-SGGGHDTIRINAGADQLW 765
>gi|15485208|emb|CAC67455.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 66/484 (13%), Positives = 119/484 (24%), Gaps = 47/484 (9%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D+ + G TI + LGL +G D
Sbjct: 282 GSRLNDRIAGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 341
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + +LG + Y
Sbjct: 342 SDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYY------ 395
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ ++ + + D+L G + + ++ G + + + + + G
Sbjct: 396 DNVRNVENVIGTSMKDVLI----GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYG 451
Query: 274 SSGNDVVIGNSANNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GND + G ++ +GND V G G+DT Y I
Sbjct: 452 DAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGR 511
Query: 323 NAIIVY------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + +A D +S +E + + Q ++L +
Sbjct: 512 IGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 571
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS-DRGAAARHYITH 429
L G DV + GRD + + D N D G
Sbjct: 572 LAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFS 631
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G G + A + A H N V
Sbjct: 632 GPGRGLDAGAKGVFLSLGKG----FASLMDEPETSNVLRHIENAVGSARDDVLI------ 681
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D + G + L A ++DL D L
Sbjct: 682 ---GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGV 738
Query: 550 GKDH 553
G H
Sbjct: 739 GYGH 742
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 51/371 (13%), Positives = 95/371 (25%), Gaps = 32/371 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ T D D+ G G + + LG G
Sbjct: 415 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLG-DDTLEGGAGN 473
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+G E+D + Y T + I A + G
Sbjct: 474 DWFGQTQAREHDVLR----------GGDGVDTVDYSQTGAHAGIAAGRIGLGILADLGAG 523
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ K+ + + ++ L + G + + + G E + +
Sbjct: 524 RVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVLLG 583
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------YLY 316
+ + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 584 GDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFSGPGRGLDAGAKG 643
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ L +E + + + ++L A + L G
Sbjct: 644 VFLSLGKGFASLMDEPETSNVLRHIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAG 703
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
DV + G D DL G D Y + E
Sbjct: 704 DDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGVGYGHDTIYESGG 750
Query: 437 PDAFKALEYIA 447
+ A
Sbjct: 751 GHDTIRINAGA 761
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/341 (13%), Positives = 80/341 (23%), Gaps = 46/341 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N +I + + G SG+D + G + N+ G + G +G D F
Sbjct: 157 IIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLG 216
Query: 313 SYLYKIYRFENAIIVYDA--------------------------------NEHKQDFLSD 340
+ ++ V N D + +
Sbjct: 217 VWSNQLDGGAGVDTVKYNVHQPSGERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKN 276
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+E L + + + L + + G D+ +G DI
Sbjct: 277 IENLHGSRLNDRIAGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQ 336
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
DD+ G D + + + +A
Sbjct: 337 DDE--TVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDY 394
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
++ ++ + +G D G G
Sbjct: 395 YDNVRNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGD------------GDDLLFG 442
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D L A ++ L D AG D F E
Sbjct: 443 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTQARE 483
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/365 (11%), Positives = 73/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSRLNDRIAGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYYDNV 398
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+VE + Q + + + L G D+
Sbjct: 399 RNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 458
Query: 390 GLSEGRDITFDSYL------YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 459 YGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGRIGLGILA 518
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 519 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 576
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 577 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRD 626
Query: 564 SITFN 568
++ F+
Sbjct: 627 TVDFS 631
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 1/94 (1%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G + + + G +G+DV++G+ +++ +GND G G D
Sbjct: 673 GSARDDVLIGDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDD 732
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
T+ + IY D L
Sbjct: 733 TYLFGVGYGHDTIYE-SGGGHDTIRINAGADQLW 765
Score = 37.5 bits (85), Expect = 8.7, Method: Composition-based stats.
Identities = 11/119 (9%), Positives = 25/119 (21%)
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D L V+ + + L + + L G D +
Sbjct: 138 ELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGE 197
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D+ + D + + + + G
Sbjct: 198 GQNTVIGGAGDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSGERLERMGDTGIHADLQ 256
>gi|300869291|ref|ZP_07113882.1| putative Hemolysin-type calcium-binding region [Oscillatoria sp.
PCC 6506]
gi|300332668|emb|CBN59080.1| putative Hemolysin-type calcium-binding region [Oscillatoria sp.
PCC 6506]
Length = 1101
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/336 (14%), Positives = 88/336 (26%), Gaps = 15/336 (4%)
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
D N+ ++++ S G+ TP S + V S+ +
Sbjct: 638 SQQDILNNIVKYTLLAPTGSDSFAFTVSDGFSNTPQSSFSITVV-------DSISDRTGI 690
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I + I G+D + + G N L + S+ G N ++
Sbjct: 691 INDNFSGTALSDYIVGGTGNDTFLGGDGNDIIDGRAGNDSILGQAANDSLLGGTGNDVLS 750
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++V G GND + G N++ F +D G DT + A + +
Sbjct: 751 GGDGNDTVDGEDGNDTIDGGFNNDLLFGGDADDSLSAGEGNDTVY--AGTGNDVLSGDAG 808
Query: 324 AIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+Y A + + R +++ + ++ G D
Sbjct: 809 DDSLYGEAGSDIVTGGVGDDTIDSGAGDDIVDGGVGRDLIDGGTGNDSVLGADGDDTVLG 868
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G D + N G
Sbjct: 869 DDGNDTQLGGVGNDYLLGEGGSDSLLGEAGNDTLDGGDGGDSLNGGFGNDLVLGGGDNDT 928
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
L A + L F + G D F EG
Sbjct: 929 LFGAAGDDILGGGFGSDLLTGEAGNDFFYFETPAEG 964
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 65/211 (30%), Gaps = 14/211 (6%)
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL------GNNIYKI 209
D+ + + D D FG + A+ +YG L G+ ++
Sbjct: 121 DTLIGDGSDDELRGDDDDDLLFGNTGQDTLDGGTALDTLYGGKDNDLLSGGSEGDLLFGN 180
Query: 210 EVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T Y G+D +L GG + + G + N T++
Sbjct: 181 NENDTVIGGDGRDTGYGGKGND----SLRGGSADDSLFGDLGEDIVWGDQGNDTLSGGGG 236
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G+ G D + GN + + F G+D+ G G D S ++ +
Sbjct: 237 DDLLFGNEGGDWLFGNDSKDTIFGGEGDDIVFGGDGDDNIV--GESGNDVLWGEFGRDTL 294
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ L ++ I V
Sbjct: 295 SGGDGRDVFVLGTFTAPNPSNASIPLVTTTG 325
Score = 40.9 bits (94), Expect = 0.63, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 67/284 (23%), Gaps = 31/284 (10%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE- 291
+ L + I +S+VGS DV+ G +
Sbjct: 67 VADDTTPGADDTLPPATGDDTLPGNLGGIIRGTETNDSLVGSPRVDVISGLGGADTLIGD 126
Query: 292 -----------------SSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIV 327
++G D DG + LDT + S ++ V
Sbjct: 127 GSDDELRGDDDDDLLFGNTGQDTLDGGTALDTLYGGKDNDLLSGGSEGDLLFGNNENDTV 186
Query: 328 YDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ + + LR I+ + L G D+ +
Sbjct: 187 IGGDGRDTGYGGKGNDSLRGGSADDSLFGDLGEDIVWGDQGNDTLSGGGGDDLLFGNEGG 246
Query: 387 YEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
++ +D F D ++ G DD + + + G D F
Sbjct: 247 DWLFGNDSKDTIFGGEGDDIVFGGDGDDNIVGESGNDVL-WGEFGRDTLSGGDGRDVFVL 305
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ A + + D G +
Sbjct: 306 GTFTAPNPSNASIPLVTTTGGPDIADADLITDYRSGDLIGLSGS 349
>gi|295688698|ref|YP_003592391.1| hemolysin-type calcium-binding region [Caulobacter segnis ATCC
21756]
gi|295430601|gb|ADG09773.1| Hemolysin-type calcium-binding region [Caulobacter segnis ATCC
21756]
Length = 1481
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 69/242 (28%), Gaps = 19/242 (7%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
D T+ + G I + + G +GND + G++ ++ G+D DG G
Sbjct: 326 DPGTDKADVLTGDAGANIIYGFGGNDVIDGGAGNDSLYGDAGDDTLIGGLGDDYLDGGYG 385
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA---------DQCIDSV 354
+DT Y + + DA +D L +E ++ + D
Sbjct: 386 IDTADYSGATGAINV---GLGYYSQDAGVMGRDSLISIENIKGSAFADWIAGTDGVNVIT 442
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ + L G D+ +G DI +Y DL
Sbjct: 443 GGAGDDTINGRGGDDVLRGEAGDDILIGGAGADTIDGGDGNDILAFDDIYTSIQVDLGKA 502
Query: 415 F-------GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
G D + G ++ +D+I+ V G
Sbjct: 503 GPQNTRGDGVDTLISIEGVKGTGYRDILVGSDGANTFEGRGGDDIIDGKGGIDTAVYDGN 562
Query: 468 DH 469
Sbjct: 563 ST 564
Score = 81.8 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 49/277 (17%), Positives = 84/277 (30%), Gaps = 10/277 (3%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
D+ + F DV G G ++ + LG + G
Sbjct: 332 ADVLTGDAGANIIYGFGGNDVIDGGAGNDSLYGDAGDDTLIGGLGDDYLDGGYGIDTADY 391
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY- 207
+ L S +D +A G G++
Sbjct: 392 SGATGAINVGLGYYSQDAGVMGRDSLISIENIKGSAFADWIAGTDGVNVITGGAGDDTIN 451
Query: 208 --KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + + G D +D + + D+ T +G T
Sbjct: 452 GRGGDDVLRGEAGDDILIGGAGADTIDGGDGNDILAFDDIYTSIQVDLGKAGPQNTRGDG 511
Query: 266 T----VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY-R 320
IE V G+ D+++G+ N F G+D+ DG G+DT Y S Y
Sbjct: 512 VDTLISIEGVKGTGYRDILVGSDGANTFEGRGGDDIIDGKGGIDTAVYDGNSTDYTWTHN 571
Query: 321 FENAIIVYDANEH--KQDFLSDVERLRFADQCIDSVN 355
+ V D+ + D L +VE L+F D+ + +
Sbjct: 572 ANGSWTVRDSRANWTGTDTLLNVEILKFKDKSVTLSS 608
Score = 73.7 bits (179), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 46/141 (32%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + TI + + + G G+D++ G+ ++ GND F G G+DT Y
Sbjct: 956 DVVTGDDSANTIFGFSGNDVIDGGKGDDILYGDGGDDRLIGGEGNDTFHGGDGVDTVDYS 1015
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ I ++ D+E L + + L A +
Sbjct: 1016 TAAAAVTIDLTRSSSQQDTRGAGLDTIWYDIENLIGSRFDDTLRGGYTANTLNGGAGDDT 1075
Query: 371 LIQVIGQDVFESMKHFYEFGL 391
+ G D+ +
Sbjct: 1076 IYGGGGSDILQGGAGNDVLNG 1096
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/336 (12%), Positives = 84/336 (25%), Gaps = 32/336 (9%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ I +G + D G G T + + + ++
Sbjct: 958 VTGDDSANTIFGFSG-NDVIDGGKGDDILYGDGGDDRLIGGEGNDTFHGGDGVDTVDYST 1016
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
D+ + + + T
Sbjct: 1017 AAAAVTIDLTRSSSQQDTRGAGLDTIWYDIENLIGSRFDDTLRGGYTANTLNGGAGDDTI 1076
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G G + G D + ++
Sbjct: 1077 YGGGGSDILQGG---AGNDVLNGEADDDSYDGGDGFDTVTYESASSGVTVDLTKIGPQNT 1133
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG------------------ 294
GG + + IES+ GS+ D + G+ N +G
Sbjct: 1134 RGGGVETL-----ANIESLKGSAFADTLTGDDGANTLNGGAGADSLSGGGGDDLLIGGAG 1188
Query: 295 NDVFDGSSGLDTFFYYAPSYLY-KIYRFENAIIVYD---ANEHKQDFLSDVERLRFADQ- 349
+D DG +G DT YY + Y + + ++ V D + D L +E++ F +
Sbjct: 1189 DDTLDGGAGADTVRYYGWANDYSVVTNTDGSVTVTDLRGGSPDGVDRLIGLEKIIFRPEP 1248
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+N + SIL ++ + + +
Sbjct: 1249 TAGELNYELSSILRGSSYDPKITALAASISSDWAAG 1284
Score = 41.7 bits (96), Expect = 0.43, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 52/212 (24%), Gaps = 16/212 (7%)
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+N + D S+ + ++ S + + N + +D K D L+
Sbjct: 286 GDNYVGSGAYGDRLTLSADGNYLVVFSGSTVTSV----NVKLAWDPGTDKADVLTG---- 337
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI------T 398
+++ A + L G D G D T
Sbjct: 338 --DAGANIIYGFGGNDVIDGGAGNDSLYGDAGDDTLIGGLGDDYLDGGYGIDTADYSGAT 395
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+ LG Y V G D + + + + + +D IN
Sbjct: 396 GAINVGLGYYSQDAGVMGRDSLISIENIKGSAFADWIAGTDGVNVITGGAGDDTINGRGG 455
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
L D G D L
Sbjct: 456 DDVLRGEAGDDILIGGAGADTIDGGDGNDILA 487
>gi|329849047|ref|ZP_08264075.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844110|gb|EGF93679.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 558
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 72/519 (13%), Positives = 137/519 (26%), Gaps = 43/519 (8%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKAD 108
NA+ L S + E + + N +S D
Sbjct: 2 ENAEAGTDLILASVSYNLGADIENLTFTGTGNLTGNGNNMANVLTGNSGNNWLEGAAGVD 61
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
G+G T + V+N E + ++ + SY +
Sbjct: 62 TLIGGLGNDTFVV---------------------DNEDSVVENAGEGNDWVLAARSYTLG 100
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-IYDSGG 227
+ A G + +A + G G+ + T + D GG
Sbjct: 101 ANLEHLALSGSGNFTATGNSLANRI--GGNSGNNWIDGLGGNDTLAGGLGNDTYVVDVGG 158
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D + + G L +G +N+ + I + G+ N+++ GN+ NN
Sbjct: 159 DAVTEAAGDGTDMVQASLTYG----LGANLENLVLTGAGNI-NGTGNDLNNILTGNAGNN 213
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+G D G G DT++ + E A + + + VE L
Sbjct: 214 ALDGGAGADRMVGGLGNDTYYVDNVADSVGENHLEGADTIISSVSYSL-NGRAVEVLTLT 272
Query: 348 D-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ V +I+ L G DV + G D + +
Sbjct: 273 GTGNLTGVGNSLNNIMTGNDGKNTLEGAAGNDVLDGGAGADRLLGGLGDDTYYVDN--IA 330
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVK---EGRNPDAFKALEYIASHEDLINAFADAPDLV 463
++ G+D ++ +Y +G + + L +
Sbjct: 331 DSVGENHLEGTDTIISSVNYSLNGRAVEVLTLTGGGNLNGTGNSLNNTLTGNAGNNVLDG 390
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR-------HYITHGVK 516
G D ++ +V + + S + + G
Sbjct: 391 GAGVDKLVGGLGDDTYYVDNTGDNVQELHLQGTDTVFSSVTYSLLGRAVEVLNLTGSGNI 450
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
AL + + L + G D F
Sbjct: 451 NATGNSLNNALMGNSGNNRLDGGVGNDTLTGGLGSDVFV 489
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 43/306 (14%), Positives = 85/306 (27%), Gaps = 27/306 (8%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
++ N + DV G G +L
Sbjct: 270 TLTGTGNLTGVGNSLNNIMTGNDGKNTLEGAAGNDVLDGGAGADRLLGGLGDD------- 322
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ G ++ D+ ++SV + + G
Sbjct: 323 ---TYYVDNIADSVGENHLEGTDTIISSVNYSLNGRAVEVLTLTGGGNLNGTG-----NS 374
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL--NTESWS 251
+ G+ GNN+ + + GDD + G + L +S
Sbjct: 375 LNNTLTGNAGNNV------LDGGAGVDKLVGGLGDDTYYVDNTGDNVQELHLQGTDTVFS 428
Query: 252 SIG----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S+ G + + + G+S N+ ++GNS NN GND G G D F
Sbjct: 429 SVTYSLLGRAVEVLNLTGSGNINATGNSLNNALMGNSGNNRLDGGVGNDTLTGGLGSDVF 488
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ ++ + F A + +++ + + +I A+
Sbjct: 489 VFLNGTWKDTVTDFSAAQNDSIDLHAITNGVANNGMVTQVGGNVLINLGGGNTITVLGAT 548
Query: 368 YEDLIQ 373
D++
Sbjct: 549 QADVLS 554
>gi|84502943|ref|ZP_01001045.1| calcium binding hemolysin protein, putative [Oceanicola batsensis
HTCC2597]
gi|84388688|gb|EAQ01559.1| calcium binding hemolysin protein, putative [Oceanicola batsensis
HTCC2597]
Length = 9568
Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/307 (14%), Positives = 92/307 (29%), Gaps = 23/307 (7%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++GG + + + + G G D + G S +++ +G D DG +G DT Y+
Sbjct: 6919 DTLGGDAADNLLRGLDGNDEIEGRGGVDTIEGGSGDDLLDGGAGGDSIDGGAGDDTATYF 6978
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+I + + D LS VE L ++ D + L +
Sbjct: 6979 GSDAAVRISLADGTAS---GGWAEGDTLSGVENLIGSELDDDLEGDSGANALFGNRGADV 7035
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L G D+ + +G D + G DL + A +
Sbjct: 7036 LTGGSGDDLLNGGRGADMLFGGDGVDTADYTLSVEGITIDLAAGTAAGGDAEGDVF---- 7091
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+ + H+D + A+ + + + FD+ Y
Sbjct: 7092 --------DSIEIIQASYHDDDLRGDANDNRFRGSRGEDYIDG------RGGFDTADYAR 7137
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF--KALEYIASHEDLINAFADAPDLVQ 548
+ + + +G A + + + A + F + +
Sbjct: 7138 ADEAVAVDLSLGQGTAGEAQGDTLISIEKLIGSIHEDTFTGSAGDDVFDGGFGNDLLRGE 7197
Query: 549 AGKDHFS 555
AG D +
Sbjct: 7198 AGSDSYL 7204
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 54/369 (14%), Positives = 104/369 (28%), Gaps = 59/369 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + ++ + + G+ GND ++G + +G+D G SG D + + +
Sbjct: 4266 TITGGSGDDSLDGQGGGDEISGAGGNDTILGGLGGDTMAGGAGDDALFGGSGDDVYEFAS 4325
Query: 312 PSYLYKIYRFENAI-----------IVYDANEHKQDFL--------------------SD 340
+ I A + + D + +
Sbjct: 4326 GDGVDVITDALGADRIAIGAGIDPADIVVSQRGGTDIILQVSNSGDRIEMIGAMSGANAR 4385
Query: 341 VERLRFADQC---------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+E + FAD + + + + L G D ++ E
Sbjct: 4386 IEEVAFADGTVWSHADLLAVLTDGTAAAQTIVGLDGDDVLDGQGGDDSVLGLQGDDEIVG 4445
Query: 392 SEGRDITF----DSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G D+ F D L G+ DL G+D A + V + + D I
Sbjct: 4446 GTGSDMLFGGSGDDTLDGGTGGDLLAGEAGNDVYDFAPGDGSDTVTDSQGVDGLSFGAGI 4505
Query: 447 ASHEDLINAFADAPDLVQVGKD------HFSNFGCEEGRFVTFDS--------YLYLGSY 492
A + + + L G + + E V FD + +
Sbjct: 4506 APGDVRVVQQGEDLVLRIAGGEDRVVLQDVLSSASREIETVAFDDGTVWTHAQLVAMAEM 4565
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D + + A G ++ A + + + AG D
Sbjct: 4566 ADGPHETITGTTGADTIAAGTGDDSVSGLAGADEIDGGAGSDTIAGGTGNDTITGGAGAD 4625
Query: 553 HFSNFGYEE 561
++ G E
Sbjct: 4626 ALTDTGGNE 4634
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/540 (13%), Positives = 141/540 (26%), Gaps = 99/540 (18%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
D G I I LG G ++G D
Sbjct: 4269 GGSGDDSLDGQGGGDEISGAGGNDTILGGLGGDTMAGGAGDDALFGGSG----DDVYEFA 4324
Query: 163 MSYFMPQDSMMDASFGYCATPM--VSDIVAVQKIYGAPK-----GSLGNNIYKIEVQQKD 215
+ + + +DIV Q+ G + G+ I I
Sbjct: 4325 SGDGVDVITDALGADRIAIGAGIDPADIVVSQR--GGTDIILQVSNSGDRIEMIGAMSGA 4382
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ I+ + + G + + T + +I G + + + +SV+G
Sbjct: 4383 NARIEEVAFADGTVW----SHADLLAVLTDGTAAAQTIVGLDGDDVLDGQGGDDSVLGLQ 4438
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-- 333
G+D ++G + +++ F SG+D DG +G D A + +Y + + V D+
Sbjct: 4439 GDDEIVGGTGSDMLFGGSGDDTLDGGTGGDLLAGEAGNDVYDFAPGDGSDTVTDSQGVDG 4498
Query: 334 -----------------KQDFL--------------------SDVERLRFADQCI----- 351
+D + ++E + F D +
Sbjct: 4499 LSFGAGIAPGDVRVVQQGEDLVLRIAGGEDRVVLQDVLSSASREIETVAFDDGTVWTHAQ 4558
Query: 352 ----------------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ A +++ G D
Sbjct: 4559 LVAMAEMADGPHETITGTTGADTIAAGTGDDSVSGLAGADEIDGGAGSDTIAGGTGNDTI 4618
Query: 390 GLSEGRDITFDSY------LYLGSYDD-LRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G D D+ G D + + G+D V+ ++
Sbjct: 4619 TGGAGADALTDTGGNELYHFATGDGPDSITDTSGTDAIQLGVGIAETDVEIRQDAGGTDL 4678
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ IA ED I+ + ++ + G + D +FG+
Sbjct: 4679 ILRIAGTEDRIHLVGALSNPDNAIEELRFDSGAVWSFAQMLAASQAASDAPD--AIFGTG 4736
Query: 503 RGAAARHYITHGVKEGRNPDA-------FKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ +GR+ D + ++ L L AG D +
Sbjct: 4737 ISDSLSGGTGDDAIDGRSGDDELSGGAGADTVTGGDGNDTLDGGTGPDLLLGGAGDDSYL 4796
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/347 (12%), Positives = 78/347 (22%), Gaps = 33/347 (9%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E + + T + AD G G TI I
Sbjct: 4564 EMADGPHETITGTTG--ADTIAAGTGDDSVSGLAGADEIDGGAGSDTIAGGTGNDTITGG 4621
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G G + D + TS + + +D+ +
Sbjct: 4622 AGADALTDTGGNELYHFATGDGPDSITDTSGTDAIQLGVGIAETDVEIRQDAGGTDL--I 4679
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+I G + + +L + T
Sbjct: 4680 LRIAGTEDRIHLVGALSNPDNAIEELRFDSGAVWSFAQMLAASQAASDAPDAIFGTGISD 4739
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G + I + + + G +G D V G N+ +G D+ G +G D++
Sbjct: 4740 SLSGGTGDDAIDGRSGDDELSGGAGADTVTGGDGNDTLDGGTGPDLLLGGAGDDSYLLDI 4799
Query: 312 PSYLYKIYRFEN----------------------AIIVYDANEHKQDFLSD-------VE 342
I + + L D +E
Sbjct: 4800 GFGQSTIDDASGTDRVEFGTGVLATDVSVRKTAEGFELRIGQTEDRLTLRDAASGAGVIE 4859
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ FAD R T + + G D +
Sbjct: 4860 TVAFADGTEWDAAELLRRATSGTPGPDSHVGTDGADELIGLAGDDTL 4906
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/320 (15%), Positives = 82/320 (25%), Gaps = 21/320 (6%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ T D+ + D D G TI + + G
Sbjct: 6911 GFEGTEFGDTLGGDAADNLLRGLDGNDEIEGRGGVDTIEGGSGDDLLDGGAGGDSIDGGA 6970
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G +D L + + + + D + A G+
Sbjct: 6971 GDDTATYFGSDAAVRISLADGTASGGWAEGDTLSGVENLIGSELDDDLEGDSGANALFGN 7030
Query: 202 LGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G ++ + ++ G D D TL IDL + +
Sbjct: 7031 RGADVLTGGSGDDLLNGGRGADMLFGGDGVDTADYTL-SVEGITIDLAAGTAAGGDAEGD 7089
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
IE + S +D + G++ +N F S G D DG G DT Y +
Sbjct: 7090 VFD-----SIEIIQASYHDDDLRGDANDNRFRGSRGEDYIDGRGGFDTADYARADEAVAV 7144
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A E + D L +E+L + +A + G D
Sbjct: 7145 DLSLGQGT---AGEAQGDTLISIEKL---------IGSIHEDTFTGSAGDDVFDGGFGND 7192
Query: 379 VFESMKHFYEFGLSEGRDIT 398
+ +
Sbjct: 7193 LLRGEAGSDSYLFGLDSSED 7212
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 58/434 (13%), Positives = 93/434 (21%), Gaps = 95/434 (21%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ T S AD G G A + G
Sbjct: 5051 TVYGDADANTLNGTSLGDYFEGGAGADTMSGGSGDDIFGDIVADDAVDSMTG-GEGRDTY 5109
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMP-----QDSMMDASFGYCATPMVSDIVAVQKIYG 196
PV V D D + + G ++ G
Sbjct: 5110 RFLPVNPVAADIAEDVITDFTPGDDGDIIRLVSSTPNPFASGRVQILQDGADTILRVNDG 5169
Query: 197 APKGSL-----GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
G G + + I+T + DD + GG + L
Sbjct: 5170 EGAGRSVLRLEGVDAGLLTAANFGGVSIETESTTITDDESASLIAGGPLGDVILGNGGAD 5229
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---- 307
+I G+ +IA + + G GND + G N+ F +GND+ G +G DT
Sbjct: 5230 TIDGFGGADSIAGGADGDLIRGGFGNDHLAGQEGNDDIFGGAGNDILSGGAGDDTLTGGS 5289
Query: 308 ---------FYYAPSYLYKIYRFENAIIVYDANEHKQDFL-------------------- 338
++ + I +D +
Sbjct: 5290 DEAEFSGHDIFHGGLGDDALSGGAQNDIYLFGANDGRDTVTDTGGTDLIEFDADVAPGDV 5349
Query: 339 -------------------------------SDVERLRFADQC----------------- 350
+D+E + F D
Sbjct: 5350 SVVRIGDDLELRVAGGTTRVLITGAVADPVGTDIEAIAFDDGTTWDRAALLARAMEATEG 5409
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
D + V L + L + G D+ LG D
Sbjct: 5410 DDMLVVLVGDTLNGLGGNDTLTGNDAANTIAGSGGDDLLRGQGGDDVY---EFGLGDGQD 5466
Query: 411 LRNVFGSDRGAAAR 424
+ D
Sbjct: 5467 VIEDGAGDNAVVLG 5480
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 52/195 (26%), Gaps = 40/195 (20%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I E+V G G+D +I + + +G D+ +G G DT+ +
Sbjct: 5541 LAGTAGDDVIHGSDGAETVAGGDGDDRLITHDGADDLSGGAGVDLLEGGDGDDTYRFGLG 5600
Query: 313 SYLYKIYRFENA--IIVYDANEHKQDFLSD-----------------------------V 341
++ IV A D V
Sbjct: 5601 DDQDRVSDTGGNADTIVLGAGIAPGDVRVAQSSDGSAIILVVGTDGDRLRIEDALGDGKV 5660
Query: 342 ERLRFADQCIDSVN-------VKQRSILEYTASYEDLIQVIGQDVFESMKHFYE--FGLS 392
E ++F D + +V + + G D F
Sbjct: 5661 ETVQFEDGTVWTVADLLAQVPTGLDDYIYGDEFDNPIEGGPGDDRTSGGAGNDTYRFSAG 5720
Query: 393 EGRDITFDSYLYLGS 407
+GRDI D
Sbjct: 5721 DGRDIIRDGATSPAD 5735
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/344 (11%), Positives = 87/344 (25%), Gaps = 43/344 (12%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + I E++ G GND + + ++ +GNDV G + DT+ +
Sbjct: 3673 WAASDADQIIHGGYEAETLDGGGGNDTIQSRNGDDTLTGGTGNDVLSGMNDNDTYRFELG 3732
Query: 313 SYLYKIYR---------------------------FENAIIVYDANEHKQDFLSD----- 340
+ N +I+ A + + +
Sbjct: 3733 FGQDVVSDNGWSNNSGADVIEFGPGIDPADLIARATANDLILTFAGSEDRIRIENTINNA 3792
Query: 341 ---VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+E L F D + + T + + + +G D
Sbjct: 3793 DYRIESLVFDDGTVLTHADLVAMAWAPTDEDQRIDAGYAAEALNGGGGQDSLYGKDGEDT 3852
Query: 398 TF-DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
+ + + + + G +G D I + ++ A
Sbjct: 3853 LTGGTGSDFLRGGNQSDTYHFEAGFGQDIVSDNGWSNNSGADVITFGPGIDPADLVVRAT 3912
Query: 457 ADAPDLVQVGKDH------FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
A+ L G + N + FD + ++ DL + + R
Sbjct: 3913 ANDLILTFAGSEDRIRIENTINNADYRIESLVFDD-GTVLTHADLVAMAWAPTDEDQRTD 3971
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ +L + L + D +
Sbjct: 3972 AGFSAEAIEGGGGSDSLYGRDGEDTLTGGTGNDFLRGGNQSDTY 4015
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/349 (13%), Positives = 88/349 (25%), Gaps = 61/349 (17%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I E+V G +GND + N + GND G + DT+ + A +
Sbjct: 4114 IDTAFAAEAVDGGAGNDTIHTNDGEDTLTGGFGNDFLRGGNQSDTYHFEAGFGQDIVSDN 4173
Query: 322 E-----NAIIVYDANEHKQDFLS------------------------------DVERLRF 346
A ++ + + +E L F
Sbjct: 4174 GWSNNSGADVITFGAGIALEDVRVQATASDLIISIAGTQDRIRIENTVGNANYRIESLLF 4233
Query: 347 ADQ------------------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D + + + + + L G D
Sbjct: 4234 DDGRSLTHADLLAMAGGPAVPGVTQAGLSVGETITGGSGDDSLDGQGGGDEISGAGGNDT 4293
Query: 389 FGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRGAA-ARHYITHGVKEGRNPDAFKAL 443
G D D L+ GS DD+ D + G D +
Sbjct: 4294 ILGGLGGDTMAGGAGDDALFGGSGDDVYEFASGDGVDVITDALGADRIAIGAGIDPADIV 4353
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
D+I +++ D ++ + V F + + S+ DL V
Sbjct: 4354 VSQRGGTDIILQVSNSGDRIE--MIGAMSGANARIEEVAF-ADGTVWSHADLLAVLTDGT 4410
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
AA G ++ + ++++ +G D
Sbjct: 4411 AAAQTIVGLDGDDVLDGQGGDDSVLGLQGDDEIVGGTGSDMLFGGSGDD 4459
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 42/357 (11%), Positives = 83/357 (23%), Gaps = 60/357 (16%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-- 322
E++ G G+D + G + +GND G + DT+ + A +
Sbjct: 3973 GFSAEAIEGGGGSDSLYGRDGEDTLTGGTGNDFLRGGNQSDTYHFEAGFGQDIVSDNGWS 4032
Query: 323 ---NAIIVYDANEHKQDFLS------------------------------DVERLRFADQ 349
++ + + +E L F D
Sbjct: 4033 NNSGTDVITFGPGIALEDIVVRATASDLIISISGTEDRIRIENGVSNADYWIETLLFDDG 4092
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ + + + + ++G D + D
Sbjct: 4093 RTLIRADLVAMAWAPRDTDQRIDTAFAAEAVDGGAGNDTIHTNDGEDTLTGGFG----ND 4148
Query: 410 DLRNVFGSDRGAAARHYIT-----HGVKEGRNPDAFKALEYIASHEDLINAFADA----- 459
LR SD + +G D IA + + A A
Sbjct: 4149 FLRGGNQSDTYHFEAGFGQDIVSDNGWSNNSGADVITFGAGIALEDVRVQATASDLIISI 4208
Query: 460 ---------PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
+ V + ++GR +T L + + V +
Sbjct: 4209 AGTQDRIRIENTVGNANYRIESLLFDDGRSLTHADLLAMAGGPAVPGVTQAGLSVGETIT 4268
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
G + ++ ++ AG D + FG F
Sbjct: 4269 GGSGDDSLDGQGGGDEISGAGGNDTILGGLGGDTMAGGAGDD--ALFGGSGDDVYEF 4323
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 65/461 (14%), Positives = 113/461 (24%), Gaps = 35/461 (7%)
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD--- 170
G + L G Y G + D +++
Sbjct: 5043 PDVGADGDTVYGDADANTLNGTSLGDYFEGGAGADTMSGGSGDDIFGDIVADDAVDSMTG 5102
Query: 171 -SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
D P+ +DI A I G G+ I + + G D
Sbjct: 5103 GEGRDTYRFLPVNPVAADI-AEDVITDFTPGDDGDIIRLVSSTPNPFASGRVQILQDGAD 5161
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ G L E + N IE+ + + + + ++
Sbjct: 5162 TILRVNDGEGAGRSVLRLEGVDAGLLTAANF---GGVSIET-----ESTTITDDESASLI 5213
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
DV G+ G DT + + A D L+ E
Sbjct: 5214 AGGPLGDVILGNGGADTIDGFGGADSIA----GGADGDLIRGGFGNDHLAGQE------G 5263
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
D IL A + L + F F G D L G+ +
Sbjct: 5264 NDDIFGGAGNDILSGGAGDDTLTGGSDEAEF---SGHDIFHGGLG-----DDALSGGAQN 5315
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
D+ +D + E A + + +DL A V +
Sbjct: 5316 DIYLFGANDGRDTVTDTGGTDLIEFDADVAPGDVSVVRIGDDLELRVAGGTTRVLITGA- 5374
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
++ + + FD L + G + G L
Sbjct: 5375 VADPVGTDIEAIAFDDGTTWDRAALLARAMEATEGDDMLVVLVGDTLNG--LGGNDTLTG 5432
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
+ + + D Q G D + FG +G+ + +
Sbjct: 5433 NDAANTIAGSGGDDLLRGQGGDDVY-EFGLGDGQDVIEDGA 5472
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 73/263 (27%), Gaps = 60/263 (22%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV----------VGSSG 276
G D D+ + + + ++ S G + + + + ++ G
Sbjct: 5753 GTDSTDIAVQFTGSDDQIIISDGISLAGRGIEQIVLEDEGTVFTIPDIVARLVDDQAGEG 5812
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+D + G+ ++ +GND+ G G DT+ Y + +I +++ D
Sbjct: 5813 DDTIFGSDGDDDLAGGTGNDLIVGGDGDDTYRYASGDGDDRIDALGRGDSRLILSDYAVD 5872
Query: 337 -----------------FLSDVE-------------------RLRFADQCI--------- 351
L V+ + F+D +
Sbjct: 5873 DVVSALRGGPQSLDLVLTLPGVDDRIVLIDALGAVNGSPGSLLIEFSDGTVWDRAAMRAR 5932
Query: 352 --DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGS 407
+ V L + + G D FG+ +G D D S
Sbjct: 5933 TLEDVQGAGDDNLWGFDGADVVHFSEGDDFAAGGSGADRYVFGVGDGNDWI-DDDGLSSS 5991
Query: 408 YDDLRNVFGSDRGAAARHYITHG 430
D+ + G A + G
Sbjct: 5992 ETDIVELIGFSADDATVSRLFRG 6014
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/246 (17%), Positives = 82/246 (33%), Gaps = 12/246 (4%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ +G S I + D G + + + G
Sbjct: 6990 DGTASGGWAEGDTLSGVENLIGSELDDDLEGDSGANALFGNRGADVLTGGSGDDLLNGGR 7049
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G ++G D D+ ++ + D + G A V D + + +
Sbjct: 7050 GADMLFGGDGV---DTADYTLSVEGITIDLAAGTAAGGDAEGDVFDSIEIIQASYHDDDL 7106
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G+ + + + S I GG D D +DL+ + G + +
Sbjct: 7107 RGD---ANDNRFRGSRGEDYIDGRGGFDTADYA-RADEAVAVDLSLGQ-GTAGEAQGDTL 7161
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I+ IE ++GS D G++ ++VF GND+ G +G D++ + S I
Sbjct: 7162 IS----IEKLIGSIHEDTFTGSAGDDVFDGGFGNDLLRGEAGSDSYLFGLDSSEDVIEEQ 7217
Query: 322 ENAIIV 327
+A +
Sbjct: 7218 GDASDI 7223
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 70/565 (12%), Positives = 140/565 (24%), Gaps = 102/565 (18%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ +D G G I + E+ G +G + G
Sbjct: 4720 AASQAASDAPDAIFGTGISDSLSGGTGDDAIDGRSGDDELSGGAGADTVTGGDGNDTLDG 4779
Query: 149 VDND------YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+DS+L + D T +++ V+V+K + +
Sbjct: 4780 GTGPDLLLGGAGDDSYLLDIGFGQSTIDDASGTDRVEFGTGVLATDVSVRKTAEGFELRI 4839
Query: 203 GNN--IYKIEVQQKDSPFIQTIYDSGGDDL-----LDLTLIGGVKNYIDLNTESWSSIGG 255
G + + I+T+ + G + L G + T+ + G
Sbjct: 4840 GQTEDRLTLRDAASGAGVIETVAFADGTEWDAAELLRRATSGTPGPDSHVGTDGADELIG 4899
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ T+ + + G + +D++ G + + +GND+ G +G D + + A +
Sbjct: 4900 LAGDDTLEGLAGADLLDGGADDDMLSGGADADEMRGGAGNDLLVGGTGGDLYVFRAGDGV 4959
Query: 316 YKIYRFE-----------------------------------NAIIVYDANEHKQDFLSD 340
I ++ + D +
Sbjct: 4960 DTIDDQGDATADTLRIEGYALDDVRFSQTGADGADLTIRFDASSDRIVVTGAFAGDDAAT 5019
Query: 341 VERLRFAD------------QCIDSVNVKQR--------SILEYTASYEDLIQVIGQDVF 380
+E + AD + V + L T+ + G D
Sbjct: 5020 IEEVVIADSLATLTLADIEARVRPDVGADGDTVYGDADANTLNGTSLGDYFEGGAGADTM 5079
Query: 381 ESMKHFYEFG------------LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
FG EGRD + D+ +D I
Sbjct: 5080 SGGSGDDIFGDIVADDAVDSMTGGEGRDT-YRFLPVNPVAADIAEDVITDFTPGDDGDII 5138
Query: 429 HGVKEGRNPDAFKALEYIASHED--------------LINAFADAPDLVQVGKDHFSNFG 474
V NP A ++ + D ++ L+ +
Sbjct: 5139 RLVSSTPNPFASGRVQILQDGADTILRVNDGEGAGRSVLRLEGVDAGLLTAANFGGVSIE 5198
Query: 475 CEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG-------RNPDAFKAL 527
E +S + + G+ + G R L
Sbjct: 5199 TESTTITDDESASLIAGGPLGDVILGNGGADTIDGFGGADSIAGGADGDLIRGGFGNDHL 5258
Query: 528 EYIASHEDLINAFADAPDLVQAGKD 552
++D+ + AG D
Sbjct: 5259 AGQEGNDDIFGGAGNDILSGGAGDD 5283
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 87/287 (30%), Gaps = 49/287 (17%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ ++ + T+ D G+ D + G + LN ++S G + +
Sbjct: 1994 DTVRLTRDGASENLLITVLDQDGNPTGDSVELVGQFGGVRLNLGAFSEAIGADDGLDFVA 2053
Query: 265 HTVIESVV--------------------GSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+IE ++ + G+D + G +N +G+D G G
Sbjct: 2054 PNLIEKIIFEKGTTLDYVDIVDRVIKNAKTDGDDAIYGMLNDNTLDGGAGDDFLTGKQGF 2113
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT+ + + + ++ + D ++ + LR+ D +
Sbjct: 2114 DTYIFGRGYGSDVVLDADFGSSLFGPKD---DLMTFTDDLRWTDFDYLRDGSGDTLTMRI 2170
Query: 365 TASYEDLI-----------------------QVIGQDVFESMKHFYEFGLSEGRDITFDS 401
T + +++I + + ++H+ + +EG DI +
Sbjct: 2171 TGTEDEVIFTDFLDEILLVGYINLIEEFEFADGTVWNYLKLLQHYVDIARTEGDDIIYGF 2230
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
D + G DR T+ G D +
Sbjct: 2231 ETI---NDRIDGGLGDDRLEGQSASDTYVFAAGYGTDTVFDTSGSET 2274
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 36/187 (19%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ S+G+D V G+ +V G+D+ G+ G D++ + I +Y
Sbjct: 2851 NAQTSAGSDAVRGSDLADVIDGGLGDDLLQGARGDDSYMFARGDGQDVIEDEHGTDTLYL 2910
Query: 330 ANEHKQDFLSD--------------------------VERLRFADQCIDSVNVKQRSILE 363
A +D + ++ + F D I S +V
Sbjct: 2911 AGYRPEDVRVERLASDRDDLLMTFVAENDAIIIRNAVIDFVEFTDGTIWSRDVLLDLA-- 2968
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ I D + G D+ FD + G DR A
Sbjct: 2969 ------NAIGSDADDFLLGTNGAEIYRPGFGNDVIFD--GFGEDVYTFSRGDGQDRIVAR 3020
Query: 424 RHYITHG 430
H +G
Sbjct: 3021 DHVDGYG 3027
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 1/127 (0%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ + SI G N I + + G+DVV + ++ G
Sbjct: 497 SGNSASVDVFVGAGVDESIYGTLGNDLIFGSGGGDYIESGDGDDVVNAGTGDDTMAGGDG 556
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
++ G G D Y S + + I + D L+ R+ D ++V
Sbjct: 557 RNLIIGGDGDDEVLYNLGSSGVDLTITLSPDIAGEGFGL-FDQLTVQLRVEGTDSQGNTV 615
Query: 355 NVKQRSI 361
+
Sbjct: 616 EDLVFNT 622
Score = 44.8 bits (104), Expect = 0.048, Method: Composition-based stats.
Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 34/168 (20%)
Query: 274 SSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--- 329
+ G+D++ G + N+ G+D +G S DT+ + A ++ + +
Sbjct: 2221 TEGDDIIYGFETINDRIDGGLGDDRLEGQSASDTYVFAAGYGTDTVFDTSGSETIEFTGI 2280
Query: 330 ------------------ANEHKQDFLSD-----------VERLRFADQCIDSVNVKQRS 360
A + L + E +FAD+ +D +
Sbjct: 2281 LSTEVEFSRTALDLIISLAGTDDRIILENQYVREHRQTHANEFFQFADRTLDYTDFNPED 2340
Query: 361 I-LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
I L T + E + + + ++G DI Y
Sbjct: 2341 IDLVGTNAAETITGSNFSETLDGRGGDDLLIGNDGGDIYLFDVGYDQD 2388
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 64/237 (27%), Gaps = 51/237 (21%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGG-------DDLLDLTLI----GGVKNYIDLNTESWSS 252
++I + + T + D L + + +
Sbjct: 2410 DDIVRFGDDITQENVVFTKDGNDLVISVLERTDTLRIRNQFLDLDNGVERFEFADGGFLL 2469
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I E+++ I ++++ + ++ N G+D G + D + + A
Sbjct: 2470 ISDVEEDLQIEGGNRGDNLIEGNPDN-------PNSLDGRQGDDTLVGGTAADIYAFGAD 2522
Query: 313 SYLYKIYR------------------------FENAIIVYDANEHKQDFL--------SD 340
+I + + + D L +
Sbjct: 2523 YDFDRIVERTDAEGVIDLVQFGASVTRDALRITRDGDDLIIDLGNGSDVLTIVGGLGSTR 2582
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQ-VIGQDVFESMKHFYEFGLSEGRD 396
VE+ RF D S++ +L T + E L+ DV +G D
Sbjct: 2583 VEQFRFGDGSTLSLDEIIDRMLTGTEADEQLVGLDNRDDVIAGGAGSDAMLGGDGDD 2639
Score = 41.7 bits (96), Expect = 0.39, Method: Composition-based stats.
Identities = 47/308 (15%), Positives = 80/308 (25%), Gaps = 30/308 (9%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-----HKQ 335
G+ + ++ ND G +G DT+ + I N +
Sbjct: 1930 YGSGSGDILLGGLNNDYLSGGAGGDTYIFRPGDGNDVIDDLGNFSFGPVQAGMDFLMFRG 1989
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D D RL + + T +L+ G G +G
Sbjct: 1990 DITQDTVRLTRDGASENLLITVLDQDGNPTGDSVELVGQFGGVRLNLGAFSEAIGADDGL 2049
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
D + + +F + +K + A+ + + L
Sbjct: 2050 DF-------VAPNLIEKIIFEKGTTLDYVDIVDRVIKNAKTDGD-DAIYGMLNDNTLDGG 2101
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY--LGSYDDLRNVFGSDRGAAARHYITH 513
D + G D + FG G V D+ L D F D Y+
Sbjct: 2102 AGDDFLTGKQGFDTYI-FGRGYGSDVVLDADFGSSLFGPKDDLMTFTDDLRWTDFDYLRD 2160
Query: 514 GVKEGRNP-----------DAFKALEYIASHEDLINAFADAPDLVQAGKD---HFSNFGY 559
G + F + + +LI F A V H+ +
Sbjct: 2161 GSGDTLTMRITGTEDEVIFTDFLDEILLVGYINLIEEFEFADGTVWNYLKLLQHYVDIAR 2220
Query: 560 EEGRSITF 567
EG I +
Sbjct: 2221 TEGDDIIY 2228
Score = 39.8 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 88/289 (30%), Gaps = 38/289 (13%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM-TIAQHTVIES-VVGSSGNDVVIG- 282
GDDL+ G I S + T++ +I+ + G+ ++ ++G
Sbjct: 2557 DGDDLIIDLGNGSDVLTIVGGLGSTRVEQFRFGDGSTLSLDEIIDRMLTGTEADEQLVGL 2616
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF----- 337
++ ++V +G+D G G D++ + I+ V +
Sbjct: 2617 DNRDDVIAGGAGSDAMLGGDGDDSYRFGYGDDSDSIFDSSGFDRVVFGAGITAETISFTN 2676
Query: 338 -----------------------LSDVERLRFADQCIDSVNVKQRSIL---EYTASYEDL 371
+ VE F D + + R+++ E +AS + L
Sbjct: 2677 VDGDLLIRLAATDERLVILGGYSANPVEIFEFEDGT-ELGIAEIRAMIRAEESSASQDIL 2735
Query: 372 IQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+D + + LSEG + F + ++ +
Sbjct: 2736 RTADFEDGVPLAAGQGNDLNILSEGGQVIFRLGDGMDRFEMAPGAGSAAIVLPDLTSSAA 2795
Query: 430 GVKEGRNPDAFKALEYIASHEDL-INAFADAPDLVQVGKDHFSNFGCEE 477
V+ + + AS + L I A + + +G E
Sbjct: 2796 VVRAADGSSDDLIVSFPASGDQLEIAGALGAGAVPSLHFADGVIWGAAE 2844
Score = 39.0 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 57/200 (28%), Gaps = 52/200 (26%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE------- 322
V G GND + +V GN++ G SG DT+F+ I E
Sbjct: 3119 DVFGREGNDWLETGRGADVVHGGLGNELLQGHSGGDTYFFGLGDGQDTIADIERETDGII 3178
Query: 323 -------------------NAIIVYDANEHKQDFLS------------DVERLRFADQCI 351
+ D ++ +ER FAD
Sbjct: 3179 DRIRFEAGILPDDIEFLSVGPRDLVIGIAGTGDRITIRDMFANVGRDSAIERFVFADGTT 3238
Query: 352 DSVNVKQRSILEYTASYEDL------------IQVIGQDVFESMKHFYEFGL--SEGRDI 397
++ AS E + G DV + E+ +GRD
Sbjct: 3239 WELDEILARATTGDASSETIDLGTIYRADATVSGGAGDDVLLGGRGDTEYRFDPGDGRDE 3298
Query: 398 TFDSYLYLGSYDDLRNVFGS 417
++ + GS D +R G
Sbjct: 3299 ISEAQDWNGSSDTVRFGAGI 3318
>gi|89071264|ref|ZP_01158437.1| type I secretion target repeat protein [Oceanicola granulosus
HTCC2516]
gi|89043212|gb|EAR49444.1| type I secretion target repeat protein [Oceanicola granulosus
HTCC2516]
Length = 1396
Score = 85.2 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 67/477 (14%), Positives = 120/477 (25%), Gaps = 29/477 (6%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
T S + D + G + + + + G +G + G
Sbjct: 704 DTLTGGSGKDRLSGGNGNDRLKGESGDDRLWGRSGADSLSGSSGADKLWGGDGNDRLAGG 763
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
D + + D +D G ++ G + + G+
Sbjct: 764 DGRDSLHGEIGNDRLAGGNADDALDGGSG---------DDRLEGEDGRDRLTGGD----G 810
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + ++Y GDD LD + GG S + G + +
Sbjct: 811 DDRLLGGADADSLYGGNGDDTLDGSTGADRLEGGSGADSLSGGSSADLLYGGSGHDRVKG 870
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + + G GND + G + S+GND G SG D + +
Sbjct: 871 GSGRDKLYGHGGNDALWGGFDADTLSGSTGNDRLYGGSGNDRL--DGDGGNDVLRGDDGN 928
Query: 325 I-IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR---SILEYTASYEDLIQVIGQDVF 380
I + + + + +R D + A + L G D
Sbjct: 929 DRIDAGHGDDDVEGGAGSDTVRLGDGRDRFAAGSGSNSGDTVYGGAGADSLAGGNGGDRL 988
Query: 381 ESMKHFYEFGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
E + G G D+ T ++LGS +D A ++
Sbjct: 989 EGGSGWDRIGAGGGNDLVRAGTGADKVWLGSGNDRFEDEAETGSAGRDQIRAGSGRDTVI 1048
Query: 437 PDAFKALEYIASHED-LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
L + D L G D + + D
Sbjct: 1049 GRGGSDLIWGEDGADSLAGGSGADRLYGGSGDDRIAAGDHADEVTGGSGGDWADLGAGDD 1108
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
R G +A G L + L+ + G D
Sbjct: 1109 RFEAGRSDRSADTVAGGSGADRLSGGAGNDRLSGQGGRDALLGGTGNDRLRGGDGAD 1165
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 74/506 (14%), Positives = 121/506 (23%), Gaps = 35/506 (6%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S S + +G+ + S D G T+ + G
Sbjct: 851 SGGSSADLLYGGSGHDRV-KGGSGRDKLYGHGGNDALWGGFDADTLSGSTGNDRLYGGSG 909
Query: 134 ---LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L G + G D + D + A +
Sbjct: 910 NDRLDGDGGNDVLRGDDGNDRIDAGHGDDDVEGGAGSDTVRLGDGRDRFAAGSGSNSGDT 969
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
V GA + GN + + I GG+DL+ G K ++ + +
Sbjct: 970 VYGGAGADSLAGGN----GGDRLEGGSGWDRIGAGGGNDLV-RAGTGADKVWLGSGNDRF 1024
Query: 251 SSIG--GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
G I + ++V+G G+D++ G + SG D G SG D
Sbjct: 1025 EDEAETGSAGRDQIRAGSGRDTVIGRGGSDLIWGEDGADSLAGGSGADRLYGGSGDDRI- 1083
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFL------SDVERLRFADQCIDSVNVKQRSIL 362
+ + + + D + + L
Sbjct: 1084 ---AAGDHADEVTGGSGGDWADLGAGDDRFEAGRSDRSADTVAGGSGADRLSGGAGNDRL 1140
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L+ G D G D + + +N G A
Sbjct: 1141 SGQGGRDALLGGTGNDRLRGGDGADSLWGGNGHDALYGGSSGDRLWGGDKNDRLFGNGGA 1200
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
R Y G L + + L Q GKD G +
Sbjct: 1201 DRLYGESGADSLEGGTGRDRLYGGSGGDRLWGDEDKDLLKGQSGKDRLYGGGGADKIKGG 1260
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
D D L G DR G + L+ A + +
Sbjct: 1261 SD-------NDRLEGGGGKDRID-----GGKGRDKIDGGKGNDRLDGGAGSDRIKGGAGR 1308
Query: 543 APDLVQAGKDHFSNFGYEEGRSITFN 568
+GKD G F+
Sbjct: 1309 DKIEGGSGKD--VLTGGSGADDFIFD 1332
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/368 (14%), Positives = 96/368 (26%), Gaps = 11/368 (2%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ I G D +D ++ GG L ++ G I
Sbjct: 531 GDDSLAGGAGGDVIEAGTGADTVDAGAGNDSVDGGSGRDSILGGTGADTLAGGANRDEID 590
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G G D + G + + G D G +G D F + +Y ++
Sbjct: 591 GGADADRLTGGDGADRIWGGAGGDKLEGEDGADTLWGGAGQDRVF--GGASDDLVYGGDS 648
Query: 324 AIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
A + + + + + L + +LE + L G D
Sbjct: 649 ADEMRGGDGADRLEGGAGADSLSGGAGDDRLLGDGDDDLLEGGDGDDSLSGGDGDDTLTG 708
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G D + S A + + G D +
Sbjct: 709 GSGKDRLSGGNGNDRLKGESGDDRLWGRSGADSLSGSSGADKLWGGDGNDRLAGGDGRDS 768
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
L ++ L AD G D + R D L D +++G +
Sbjct: 769 LHGEIGNDRLAGGNADDALDGGSGDDRLEGEDGRD-RLTGGDGDDRLLGGADADSLYGGN 827
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
+ G +L +S + L +G+D G +
Sbjct: 828 GDDTLD--GSTGADRLEGGSGADSLSGGSSADLLYGGSGHDRVKGGSGRDKLYGHGGNDA 885
Query: 563 RSITFNPD 570
F+ D
Sbjct: 886 LWGGFDAD 893
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/236 (19%), Positives = 73/236 (30%), Gaps = 12/236 (5%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T S D G+ +L + G NG +YG
Sbjct: 1119 ADTVAGGSGADRLSGGAGNDRLSGQGGRDALLGGTGNDRLRGGDGADSLWGGNGHDALYG 1178
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
D + + + D +G + ++YG S G+ ++
Sbjct: 1179 G---SSGDRLWGGDKNDRLFGNGGADRLYGESGADSLEGGTGRDRLYGG---SGGDRLWG 1232
Query: 209 IEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
E + K +Y GG D + GG N I G + I
Sbjct: 1233 DEDKDLLKGQSGKDRLYGGGGADKIK----GGSDNDRLEGGGGKDRIDGGKGRDKIDGGK 1288
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G +G+D + G + + SG DV G SG D F + S +I F+
Sbjct: 1289 GNDRLDGGAGSDRIKGGAGRDKIEGGSGKDVLTGGSGADDFIFDRRSGRDRIRDFD 1344
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/288 (13%), Positives = 72/288 (25%), Gaps = 6/288 (2%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+S+ G +G DV+ + + +GND DG SG D+ + + N
Sbjct: 530 AGDDSLAGGAGGDVIEAGTGADTVDAGAGNDSVDGGSGRDSIL--GGTGADTLAGGANRD 587
Query: 326 IVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + +R+ L A + + D+
Sbjct: 588 EIDGGADADRLTGGDGADRIWGGAGGDKLEGEDGADTLWGGAGQDRVFGGASDDLVYGGD 647
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
E +G D + G G D L
Sbjct: 648 SADEMRGGDGADRLEGGAGADSLSGGAGDDRLLGDGDDDLLEGGDGDDSLSGGDGDDTLT 707
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ + L + + G D + + + G + R G R
Sbjct: 708 GGSGKDRLSGGNGNDRLKGESGDDRLWGRSGADSLSGSSGADKLWGGDGNDRLAGGDGRD 767
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G +A AL+ + + L G D
Sbjct: 768 SLH---GEIGNDRLAGGNADDALDGGSGDDRLEGEDGRDRLTGGDGDD 812
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 40/317 (12%), Positives = 85/317 (26%), Gaps = 18/317 (5%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S T++ + + G G D + G+ +++ + +G D +G +G D F
Sbjct: 355 SEKRAGSGGATLSGGAGDDLLTGGDGADSLRGSGGDDILVDGAGADRMNGGAGDDLFVLS 414
Query: 311 APSYLYKIYRFENAII---------VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
A +I F+ ++DA S R+ ++ +D + +S+
Sbjct: 415 ADGARDRIDGFDERDDRLDLTSWPFLFDAKRLDIGEKSWGARVTCDEEELDLYSADGKSL 474
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
G+ + +G D+ S+ +
Sbjct: 475 NRKAVLSAIDTTGPGRTFKAPER---NRTGGDGSDLLHGSWGGDRLFGGGGGDSLFGGAG 531
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
G ++ A ++ + L G D + +
Sbjct: 532 DDSLAGGAGGDVIEAGTGADTVDAGAGNDSVDGGSGRDSILGGTGADTLAGGANRDEIDG 591
Query: 482 TFDSYLYLGSYDDLRNVFGS------DRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
D+ G R G+ A + G + + S ++
Sbjct: 592 GADADRLTGGDGADRIWGGAGGDKLEGEDGADTLWGGAGQDRVFGGASDDLVYGGDSADE 651
Query: 536 LINAFADAPDLVQAGKD 552
+ AG D
Sbjct: 652 MRGGDGADRLEGGAGAD 668
>gi|85714737|ref|ZP_01045724.1| possible protease [Nitrobacter sp. Nb-311A]
gi|85698622|gb|EAQ36492.1| possible protease [Nitrobacter sp. Nb-311A]
Length = 164
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 56/160 (35%), Gaps = 23/160 (14%)
Query: 23 WSNYFIRYKPDVLTT--------HRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
W+ + Y + S + LN Q+ R ALG +S V +L + E +
Sbjct: 3 WATANLTYSFPTSASYYGSGYGIGEPSDNFETLNNQQQDAVRIALGMFSSVANLNYLELT 62
Query: 75 IHS----DIKFISSNN---GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ D++F S+ + P + F+ + + +G +HE
Sbjct: 63 ETAVQHADLRFALSDAPSTAWAYLPHPAPEGGGDAWFNNSSGYYSAPVRGNYAHFTIIHE 122
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
IGHA GL H DS +VMSY
Sbjct: 123 IGHAHGLDHAHED--------PAVPVSRDSIEYTVMSYRS 154
>gi|291537156|emb|CBL10268.1| Uncharacterized vancomycin resistance protein [Roseburia
intestinalis M50/1]
Length = 293
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F A Y +++ D+ AF + A +HF N+G EGRS + FNP Y Y DL
Sbjct: 43 FDADYYRSAYPDVAAAFGNNK---AALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQ 99
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISGM 610
FG D +A +HY+T G EGR G +G
Sbjct: 100 AFGDDMAAYCRHYVTCGKAEGRDGGGTGS 128
Score = 80.6 bits (197), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ F Y A + DL AF
Sbjct: 43 FDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFG 102
Query: 542 DAPDLVQAGKDHFSNFGYEEGRS 564
D A H+ G EGR
Sbjct: 103 DDM---AAYCRHYVTCGKAEGRD 122
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDL 495
F A Y +++ D+ AF + +HF N+G EGR F+ Y Y DL
Sbjct: 41 AVFDADYYRSAYPDVAAAFGNN---KAALFNHFVNYGLREGRSCSADFNPQAYRAKYADL 97
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDA 523
+ FG D A RHY+T G EGR+
Sbjct: 98 QQAFGDDMAAYCRHYVTCGKAEGRDGGG 125
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYD 409
S Y ++Y D+ G + HF +GL EGR F+ Y Y
Sbjct: 36 RSAYQAVFDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYA 95
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
DL+ FG D A RHY+T G EGR+ ++
Sbjct: 96 DLQQAFGDDMAAYCRHYVTCGKAEGRDGGGTGSVS 130
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFA 457
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ F Y A + DL AF
Sbjct: 43 FDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFG 102
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT 482
D + H+ G EGR
Sbjct: 103 DD---MAAYCRHYVTCGKAEGRDGG 124
>gi|254805196|ref|YP_003083417.1| FrpA/C-related protein [Neisseria meningitidis alpha14]
gi|254668738|emb|CBA06575.1| FrpA/C-related protein [Neisseria meningitidis alpha14]
Length = 1422
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 72/537 (13%), Positives = 131/537 (24%), Gaps = 57/537 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ D D G G + + G
Sbjct: 844 DGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGF 903
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-----------MMDASFGYCATP 183
YN Y D D ++++ + + S+
Sbjct: 904 GQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGS 963
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
I + G + + TL GG+ +
Sbjct: 964 GAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGN--------TLNGGLGDDY 1015
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + G N +I +++ G GND + G + N+V GND +G G
Sbjct: 1016 LYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDG 1075
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT + + + QD + + + I + +L
Sbjct: 1076 NDTLI--GGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLT 1133
Query: 364 YTASYEDLI--QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+T L+ G +F G +Y + D V
Sbjct: 1134 FTREGNHLLIKAKDGSGQVTVQSYFQNDGSG--------AYRIDEIHFDNGKVLDVATVK 1185
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
T G + L + L A D G
Sbjct: 1186 ELVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLNGDAG--------------- 1230
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
+ +Y G+ +D + + Y +G + L ++ LI
Sbjct: 1231 --NDSIYSGNGNDTLDGGEGNDAL----YGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAG 1284
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ +G D + + EG + ++ D + G AA H+I G
Sbjct: 1285 NDYLEGGSGSDTYV---FGEGFGQDTVYNYHVDKNSDTMHFKG--FKAADVHFIRSG 1336
Score = 84.5 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 62/456 (13%), Positives = 120/456 (26%), Gaps = 66/456 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 658 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 717
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 718 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 777
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 778 VLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 833
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + + + G GND + G N+ +GND +G SG
Sbjct: 834 IYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 893
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 894 SDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 953
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 954 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGD 1013
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D + + Y +G
Sbjct: 1014 DYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDVLNGG 1064
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ L ++ LI + G D +
Sbjct: 1065 EGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 1100
>gi|126729508|ref|ZP_01745321.1| type I secretion target repeat protein [Sagittula stellata E-37]
gi|126709627|gb|EBA08680.1| type I secretion target repeat protein [Sagittula stellata E-37]
Length = 1094
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 56/392 (14%), Positives = 97/392 (24%), Gaps = 37/392 (9%)
Query: 60 GEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
+ V+ +T T + + TP I + D G +
Sbjct: 442 ADVGDVLTVTSVGTPANGTATLDPTTGEVTYTPNAGFIGVERIPYTIDDG-NGGTDSAEM 500
Query: 120 LSHNALHEIGH-----------ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
+ + AL P + P D D E + ++S
Sbjct: 501 IVGVGIDISEGRIDTDVFPVPPALQPFDPLNGFDQDPDPSDDLDSETGTSGADLISTGDD 560
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG----NNIYKIEVQQKDSPFIQTIYD 224
D+++ P + D + + G + I + I T D
Sbjct: 561 DDTIVAGGGADTVLPGIDDD--LVDLGGGNDYLFDVQGADTISGGQGNDTIIAGIDTFSD 618
Query: 225 SGGDDLL--------DLTLIGGVKNYIDLN-----TESWSSIGGYEKNMTIAQHTVIESV 271
DD D+ N D I + TI +++
Sbjct: 619 YENDDPAFAPGSPLRDVFGFTSDPNQEDGRDSVDGEGGDDYIETGDDRDTITGGGGNDTI 678
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL---YKIYRFENAIIVY 328
G +D++ GN ++ G+D DG G D + L I
Sbjct: 679 DGGIDDDLIRGNQGDDSLIGGHGSDTIDGGQGNDYIDGSNIASLELTDDIDVNTENDRDL 738
Query: 329 DANEHKQDFLSDVER---LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D + + L+ + + LI G D
Sbjct: 739 LQGFLGNDTIYGGDDDDTLQGGSGDDYLDGGIDDDEISGGRDNDTLIGGQGNDTLNGGAG 798
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ RD+ F G D + G
Sbjct: 799 MDDIQGGSDRDVIFVDSAAHGIGDTVDGGSGG 830
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/342 (12%), Positives = 84/342 (24%), Gaps = 31/342 (9%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ D ++ P D + D G TI I +
Sbjct: 557 TGDDDDTIVAGGGADTVLPGIDDDLVDLGGGN--DYLFDVQGADTISGGQGNDTIIAGID 614
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
S D F + +D G D +
Sbjct: 615 ---TFSDYENDDPAFAPGSPLRDVFGFTSDPNQEDGRDSVDGEGGDDYIETGDDRDTITG 671
Query: 194 IYGAPKGSLGNNIY-----KIEVQQKDSPFIQTIYDSGGDDLLDLTL------------- 235
G G + + + TI G+D +D +
Sbjct: 672 GGGNDTIDGGIDDDLIRGNQGDDSLIGGHGSDTIDGGQGNDYIDGSNIASLELTDDIDVN 731
Query: 236 --------IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
G + N + ++ G + + + + G ND +IG N+
Sbjct: 732 TENDRDLLQGFLGNDTIYGGDDDDTLQGGSGDDYLDGGIDDDEISGGRDNDTLIGGQGND 791
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+G D G S D F + ++ + D + + D + L +
Sbjct: 792 TLNGGAGMDDIQGGSDRDVIFVDSAAHGIGDTVDGGSGGFVDVADPEDAPNQDYDILNLS 851
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
++ + ++ + V D ++ +F
Sbjct: 852 GVGRQDIDWRLTNVTTDSNGNGIDGTVEFLDGSGAVTGTMDF 893
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/254 (11%), Positives = 59/254 (23%), Gaps = 11/254 (4%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G + + +I T+ + V GND + + GN
Sbjct: 547 TGTSGADLISTGDDDDTIVAGGGADTVLPGIDDDLVDLGGGNDYLFDVQGADTISGGQGN 606
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-------HKQDFLSDVERLRFAD 348
D +G+DTF Y + ++ D + + D
Sbjct: 607 DTII--AGIDTFSDYENDDPAFAPGSPLRDVFGFTSDPNQEDGRDSVDGEGGDDYIETGD 664
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
++ + + G D +G D S +
Sbjct: 665 DRDTITGGGGNDTIDGGIDDDLIRGNQGDDSLIGGHGSDTIDGGQGNDYIDGSNIASLEL 724
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
D +V + + ++ G D L+ + + L D D
Sbjct: 725 TDDIDVNTENDRDLLQGFL--GNDTIYGGDDDDTLQGGSGDDYLDGGIDDDEISGGRDND 782
Query: 469 HFSNFGCEEGRFVT 482
+
Sbjct: 783 TLIGGQGNDTLNGG 796
Score = 47.1 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 57/512 (11%), Positives = 119/512 (23%), Gaps = 76/512 (14%)
Query: 68 LTFEETSIHSDIK--FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+T E ++ + G + TP + D T+
Sbjct: 347 ITITEVGTPANGTAVIDPTTGGIIYTPNDGFLGIDTFTYTVTDGTPGNTSTATVSVGVTP 406
Query: 126 HEIGHA----LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF------MPQDSMMDA 175
A + + S + P+ + D+ + V++ ++
Sbjct: 407 DTAPPANIPPVAMDDIVSTDPATPIVIEPLANDTDADVGDVLTVTSVGTPANGTATLDPT 466
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNN----IYKIEVQQKDSPFIQTIYDSGGD--- 228
+ TP I + Y G+ G + I + + + ++
Sbjct: 467 TGEVTYTPNAGFIGVERIPYTIDDGNGGTDSAEMIVGVGIDISEGRIDTDVFPVPPALQP 526
Query: 229 ----DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ D + T I + + TI ++V+ +D+V
Sbjct: 527 FDPLNGFDQDPDPSDDLDSETGTSGADLISTGDDDDTIVAGGGADTVLPGIDDDLVDLGG 586
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+ F+ G D G G DT + + +EN + +D
Sbjct: 587 GNDYLFDVQGADTISGGQGNDTII----AGIDTFSDYENDDPAFAPGSPLRDVFGFTSDP 642
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----D 400
D +E + + G D + ++G D
Sbjct: 643 NQEDGRDSVDGEGGDDYIETGDDRDTITGGGGNDTIDGGIDDDLIRGNQGDDSLIGGHGS 702
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+ G +D + + + F D I D
Sbjct: 703 DTIDGGQGNDYIDGSNIASLELTDDIDVNTENDRDLLQGF-------LGNDTIYGGDDDD 755
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
L D + + G ++ E
Sbjct: 756 TLQGGSGDDYLDGGIDD--------------------------------------DEISG 777
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L ++ L + +D
Sbjct: 778 GRDNDTLIGGQGNDTLNGGAGMDDIQGGSDRD 809
>gi|148241798|ref|YP_001226955.1| hypothetical protein SynRCC307_0699 [Synechococcus sp. RCC307]
gi|147850108|emb|CAK27602.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 345
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 53/175 (30%), Gaps = 4/175 (2%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G + + ++ L T I G N ++A + + G +GND + G
Sbjct: 85 GVNWTYQNIMNLTDSEFLTLATRGNDVIIGSRYNDSLAGEIGNDKIKGGNGNDRLSGGRG 144
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA----IIVYDANEHKQDFLSDV 341
+ + SG DV +G G D+ + +N + +D L +
Sbjct: 145 IDSLYGGSGQDVVNGGVGNDSINGGSGRDTAVFSSRKNRINLKTTKWQNTGDGRDRLISI 204
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
E + + + L + L G D + G D
Sbjct: 205 ENVNAGSGNDVVTGNRSANTLNGQNGNDVLNGAAGNDYLLGGRGNDRLKGGSGND 259
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 49/179 (27%), Gaps = 23/179 (12%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
N + + + S+ G N I + + G G D + G S +V GND
Sbjct: 105 ATRGNDVIIGSRYNDSLAGEIGNDKIKGGNGNDRLSGGRGIDSLYGGSGQDVVNGGVGND 164
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER------------- 343
+G SG DT + + + + +D L +E
Sbjct: 165 SINGGSGRDTAVFSSRKNRINLK-----TTKWQNTGDGRDRLISIENVNAGSGNDVVTGN 219
Query: 344 -----LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
L + L + L G D + + GRD
Sbjct: 220 RSANTLNGQNGNDVLNGAAGNDYLLGGRGNDRLKGGSGNDKLVGGQGNDKLWGGSGRDT 278
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 49/145 (33%), Gaps = 5/145 (3%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYD--SGGDDLLDLT--LIGGVKNYIDLNTESWSSIG 254
G G + ++ T + G D L + G N + S +++
Sbjct: 167 NGGSGRDTAVFSSRKNRINLKTTKWQNTGDGRDRLISIENVNAGSGNDVVTGNRSANTLN 226
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + ++G GND + G S N+ GND G SG DTF S
Sbjct: 227 GQNGNDVLNGAAGNDYLLGGRGNDRLKGGSGNDKLVGGQGNDKLWGGSGRDTFVLSEGSG 286
Query: 315 LYKIYRFENAIIVYDANEHKQDFLS 339
+I F N D L
Sbjct: 287 YDRIMDFRNGQDRIQMGS-GVDNLK 310
>gi|15485204|emb|CAC67453.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 66/484 (13%), Positives = 119/484 (24%), Gaps = 47/484 (9%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D+ + G TI + LGL +G D
Sbjct: 282 GSRLNDRIVGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 341
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + +LG + Y
Sbjct: 342 SDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYY------ 395
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ ++ + + D+L G + + ++ G + + + + + G
Sbjct: 396 DNVRNVENVIGTSMKDVLI----GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYG 451
Query: 274 SSGNDVVIGNSANNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GND + G + +GND V G G+DT Y I
Sbjct: 452 DAGNDTLYGGLGGDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGR 511
Query: 323 NAIIVY------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + +A D +S +E + + Q ++L +
Sbjct: 512 IGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 571
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS-DRGAAARHYITH 429
L G DV + GRD + + D N D G
Sbjct: 572 LAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFS 631
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G G + A + A H N V
Sbjct: 632 GPGRGLDAGAKGVFLSLGKG----FASLMDEPETSNVLRHIENAVGSARDDVLI------ 681
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D + G + L A ++DL D L
Sbjct: 682 ---GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGV 738
Query: 550 GKDH 553
G H
Sbjct: 739 GYGH 742
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 51/371 (13%), Positives = 98/371 (26%), Gaps = 32/371 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ T D D+ G G + + LG +
Sbjct: 415 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLG------GDTLE 468
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
G D + + V+ D++ Y T + I A + G
Sbjct: 469 GGAGNDWFGQTQAREHDVLRGGDGVDTVD-----YSQTGAHAGIAAGRIGLGILADLGAG 523
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ K+ + + ++ L + G + + + G E + +
Sbjct: 524 RVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVLLG 583
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------YLY 316
+ + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 584 GDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFSGPGRGLDAGAKG 643
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ L +E + + + ++L A + L G
Sbjct: 644 VFLSLGKGFASLMDEPETSNVLRHIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAG 703
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
DV + G D DL G D Y + E
Sbjct: 704 DDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGVGYGHDTIYESGG 750
Query: 437 PDAFKALEYIA 447
+ A
Sbjct: 751 GHDTIRINAGA 761
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/348 (11%), Positives = 83/348 (23%), Gaps = 37/348 (10%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N +I + + G SG+D + G + N+ G + G +G D F
Sbjct: 157 IIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLG 216
Query: 313 SYLYKIYRFENAIIVYDA--------------------------------NEHKQDFLSD 340
+ ++ V N D + +
Sbjct: 217 VWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKN 276
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+E L + V + + L + + G D+ +G DI
Sbjct: 277 IENLHGSRLNDRIVGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQ 336
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
DD+ G D + + + +A
Sbjct: 337 DDE--TVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDY 394
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
++ ++ + +G D G + G
Sbjct: 395 YDNVRNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLL---FGGDGNDMLYG 451
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
L + L + ++H G + ++ ++
Sbjct: 452 DAGNDTLYGGLGGDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYS 499
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/365 (11%), Positives = 72/365 (19%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N I + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSRLNDRIVGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYYDNV 398
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+VE + Q + + + L G D+
Sbjct: 399 RNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 458
Query: 390 GLSEGRDITFDSYL------YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 459 YGGLGGDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGRIGLGILA 518
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 519 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 576
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 577 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRD 626
Query: 564 SITFN 568
++ F+
Sbjct: 627 TVDFS 631
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 1/94 (1%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G + + + G +G+DV++G+ +++ +GND G G D
Sbjct: 673 GSARDDVLIGDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDD 732
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
T+ + IY D L
Sbjct: 733 TYLFGVGYGHDTIYE-SGGGHDTIRINAGADQLW 765
Score = 37.1 bits (84), Expect = 9.9, Method: Composition-based stats.
Identities = 10/93 (10%), Positives = 21/93 (22%)
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D L V+ + + L + + L G D +
Sbjct: 138 ELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGE 197
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
G D+ + D +
Sbjct: 198 GQNTVIGGAGDDVFLQDLGVWSNQLDGGAGVDT 230
>gi|325132404|gb|EGC55097.1| iron-regulated protein FrpA [Neisseria meningitidis M6190]
Length = 1295
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 82/550 (14%), Positives = 145/550 (26%), Gaps = 83/550 (15%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D+ + + D G G + +N + G H +G + G +
Sbjct: 699 NGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGN 758
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-----GSLGN--- 204
+ S +Y + D + Y DI ++ G GN
Sbjct: 759 DYLEGGSGSD-TYVFGKGFGQDTVYNYDYATGRKDI--IRFTDGITADMLTFTREGNHLL 815
Query: 205 ------------NIYKIEVQQKDSPFIQTIYDSG-----------------GDDLLDLTL 235
Y + +D+G G D L
Sbjct: 816 IKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQ 875
Query: 236 IGGV-----KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
G + + + G N +I +++ G GND + G + N+V
Sbjct: 876 SGSTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLN 935
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
GND +G G DT + + + QD + + +
Sbjct: 936 GGEGNDHLNGEDGNDTLI--GGAGNDYLEGSSGSDTYVFGEGFGQDTVYNYDYATGRKDI 993
Query: 351 IDSVNVKQRSILEYTASYEDLI--QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
I + +L +T L+ G +F G +Y +
Sbjct: 994 IRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSG--------AYRIDEIH 1045
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
D V T G + L + L A D G
Sbjct: 1046 FDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLNGDAG-- 1103
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
+ +Y G+ +D + + Y +G + L
Sbjct: 1104 ---------------NDSIYSGNGNDTLDGGEGNDAL----YGYNGNDVLNGGEGNDHLN 1144
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRS 588
++ LI + +G D + FG G+ +N ++ D + G
Sbjct: 1145 GEDGNDTLIGGAGNDYLEGGSGSDTYV-FGKGFGQDTVYN--YHVDKNSDTMHFKG--FK 1199
Query: 589 AAAQHYITHG 598
AA H+I G
Sbjct: 1200 AADVHFIRSG 1209
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 62/458 (13%), Positives = 119/458 (25%), Gaps = 66/458 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 531 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 590
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 591 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 650
Query: 188 --IVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y +Y + GDDLL+ G N
Sbjct: 651 VLDVATVKELVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDAGNDS 706
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + + + G GND + G N+ +GND +G SG
Sbjct: 707 IYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 766
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 767 SDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 826
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQ 377
V ++ ++ + F + + V + L S L +G
Sbjct: 827 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGD 886
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D G D +Y G+ +D + + Y +G
Sbjct: 887 DYLYGADGDDLLNGDAGND-----SIYSGNGNDTLDGGEGNDAL----YGYNGNDVLNGG 937
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ L ++ LI + G D +
Sbjct: 938 EGNDHLNGEDGNDTLIGGAGNDYLEGSSGSDTYVFGEG 975
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 56/413 (13%), Positives = 106/413 (25%), Gaps = 70/413 (16%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + T + +D + +G G G +N + G +
Sbjct: 736 GGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 795
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-----IVA 190
+ + ++ + D S Y + D VA
Sbjct: 796 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 855
Query: 191 VQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
K + +Y +Y + GDDLL+ G N +
Sbjct: 856 TVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDAGNDSIYSGN 911
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G E N + + + + G GND + G N+ +GND +GSSG DT+
Sbjct: 912 GNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGSSGSDTYV 971
Query: 309 YYAPSYLYKIYRFE-------------------------------------NAIIVYDAN 331
+ +Y ++ + V
Sbjct: 972 FGEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYF 1031
Query: 332 EHKQDFLSDVERLRF------------------ADQCIDSVNVKQRSILEYTASYEDLIQ 373
++ ++ + F D + S L + L
Sbjct: 1032 QNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYG 1091
Query: 374 VIGQDVFESMKHFYEFGLSEGRDIT----FDSYLYLGSYDDLRNVFGSDRGAA 422
G D+ G D + LY + +D+ N +
Sbjct: 1092 ADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLN 1144
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 75/272 (27%), Gaps = 29/272 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ D D G G + + G
Sbjct: 917 DGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGSSGSDTYVFGEGF 976
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-----------MMDASFGYCATP 183
YN Y D D ++++ + + S+
Sbjct: 977 GQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGS 1036
Query: 184 MVSDIVAVQKIYG-----------APKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDD 229
I + G + + G++ Y+ +Y + GDD
Sbjct: 1037 GAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDD 1096
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LL+ G N + ++ G E N + + + + G GND + G N+
Sbjct: 1097 LLN----GDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTL 1152
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+GND +G SG DT+ + +Y +
Sbjct: 1153 IGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNY 1184
>gi|307308175|ref|ZP_07587890.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
gi|306901378|gb|EFN31983.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti
BL225C]
Length = 1072
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/277 (16%), Positives = 81/277 (29%), Gaps = 12/277 (4%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + + I G D +D + + + + T++
Sbjct: 25 FGGDDFIQGLGGADVINGGAGVDTVDYSEKTTSVVVTLTGATAATVFVNGVADDTLSN-- 82
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+E+V G SGND + G++ NN+ GNDV DG +G DT Y + + +
Sbjct: 83 -VENVYGGSGNDTITGDAQNNLIRGGGGNDVLDGGAGNDTADYTDKTTSVVVTLAGATLA 141
Query: 327 VYDANEHKQDFLSDVER---------LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
N +D +S+ E L D+ IL A + L G
Sbjct: 142 TVFVNGIAEDTISNFENVYGGSANDVLTGDDRANILRGEAGDDILNGGADDDLLSGGAGN 201
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D + F L E + D + + +
Sbjct: 202 DTADGGTGIDTFDLREKTSSVVVQLSGANAATVFVGGVAEDTIRNVENIVGGTADDTLGG 261
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
DA A D + A L +++
Sbjct: 262 DAAANKLSGARGNDWLKGGGGADTLDGGEDSDTADYS 298
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 59/448 (13%), Positives = 108/448 (24%), Gaps = 42/448 (9%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-- 262
+ ++ G D D G TI
Sbjct: 634 TGDGNSNTIRGGAGADSLDGGAGADTADYRDKTKSVAVTLDGANPVIVKVGGVIEDTIRN 693
Query: 263 ----AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + +++ G +V+ GN + G DV DG +G+DT Y + +
Sbjct: 694 FENISGGSAGDTLTGDGLANVLAGNDGADTLRGGLGKDVLDGGNGVDTADYLEKTDAISV 753
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A +D + VE ++ L A+ +G D
Sbjct: 754 TLNGTASAAVLVGGTAEDTIRGVENF---------LSGSGADTLVGDAASNMFRGALGAD 804
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ Y + A+ ++ G
Sbjct: 805 FIDGGAGVDT-----------------ADYREKTASVDVTLLGASDSFVFVGGAAEDTIR 847
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ + ++ L GKD + G + + SY D
Sbjct: 848 NIENVFGGKGNDTLTGDGLANTLNGNDGKDLLTGGGGADILDGG--AASDTASYRDKTAS 905
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
A +T G + + ++ L G D FG
Sbjct: 906 VSVTLDGATYTTVTVGGVAEDTIRNVENIWGGTGNDSLSGDANANLLSGGGGSD--ILFG 963
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
F+ L D F + I + G ++ QF + +
Sbjct: 964 GAGADIFQFDFALG-GGNVDTVLDFTAGDRLFLSKSIFTSLSGG---TLAATQFYAAAD- 1018
Query: 619 SEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ + + +D LY D G
Sbjct: 1019 -ATAAQNVNQKIIYDTTSGALYYDADGS 1045
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 55/367 (14%), Positives = 96/367 (26%), Gaps = 13/367 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
K + I G D D + + + G T+
Sbjct: 564 SGSDLLKGAGGQDVIDGGAGSDTADFSDKTAAVVLALAGAANAIATVGGLAEDTVRN--- 620
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IES+ G +G DV+ G+ +N +G D DG +G DT Y + + ++
Sbjct: 621 IESIFGGAGADVLTGDGNSNTIRGGAGADSLDGGAGADTADYRDKTKSVAVTLDGANPVI 680
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+D + + E + ++L + L +G+DV +
Sbjct: 681 VKVGGVIEDTIRNFENISGGSAGDTLTGDGLANVLAGNDGADTLRGGLGKDVLDGGNGVD 740
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
E D + S L D ++++ + DA + A
Sbjct: 741 TADYLEKTDAISVTLNGTASAAVLVGGTAEDTIRGVENFLSGSGADTLVGDAASNMFRGA 800
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
D I+ A E+ V S+ +
Sbjct: 801 LGADFIDGGAGVDTADY----------REKTASVDVTLLGASDSFVFVGGAAEDTIRNIE 850
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
+ G L + L A D S S+T
Sbjct: 851 NVFGGKGNDTLTGDGLANTLNGNDGKDLLTGGGGADILDGGAASDTASYRDKTASVSVTL 910
Query: 568 NPDLYLT 574
+ Y T
Sbjct: 911 DGATYTT 917
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/360 (11%), Positives = 86/360 (23%), Gaps = 19/360 (5%)
Query: 202 LGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GN+ + Q + G+D D T +
Sbjct: 90 SGNDTITGDAQNNLIRGGGGNDVLDGGAGNDTADYTDKTTSVVVTLAGATLATVFVNGIA 149
Query: 259 NMTIA------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
TI+ + + + G +++ G + +++ + +D+ G +G DT
Sbjct: 150 EDTISNFENVYGGSANDVLTGDDRANILRGEAGDDILNGGADDDLLSGGAGNDTADGGTG 209
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + ++++V + + + V L A+ L
Sbjct: 210 IDTFDLREKTSSVVVQLSGANAATVFVGGVAEDTIRNVENIVGGTADDTLGGDAAANKLS 269
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D + E D Y D +T G
Sbjct: 270 GARGNDWLKGGGGADTLDGGEDSDT--------ADYSDKAAAIAVALNGGNPVTVTVGGI 321
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ + + + +I A +G D G + + + +
Sbjct: 322 AEDLIAKIENIVGGSGGDTIIGDAAANAFRGGLGADVLDGGGGSDTADFSDKVQSVVLAL 381
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ + + G A G A+ G D
Sbjct: 382 NGAVDAIAAVGGTAEDTVRNIENITG--GSGNDQFTGDAAANTFRGGLGADVLDGGDGSD 439
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/211 (14%), Positives = 64/211 (30%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I ++G+ +DV+ G ++ G DV +G +G+DT Y + +
Sbjct: 4 INGTAGNNVLIGTDLDDVISGFGGDDFIQGLGGADVINGGAGVDTVDYSEKTTSVVVTLT 63
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N D LS+VE + Q +++ + L G D +
Sbjct: 64 GATAATVFVNGVADDTLSNVENVYGGSGNDTITGDAQNNLIRGGGGNDVLDGGAGNDTAD 123
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
++ ++ + D + N G+A +A
Sbjct: 124 YTDKTTSVVVTLAGATLATVFVNGIAEDTISNFENVYGGSANDVLTGDDRANILRGEAGD 183
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ + +DL++ A +
Sbjct: 184 DILNGGADDDLLSGGAGNDTADGGTGIDTFD 214
>gi|83942092|ref|ZP_00954554.1| hypothetical protein EE36_07648 [Sulfitobacter sp. EE-36]
gi|83847912|gb|EAP85787.1| hypothetical protein EE36_07648 [Sulfitobacter sp. EE-36]
Length = 829
Score = 84.8 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 67/206 (32%), Gaps = 16/206 (7%)
Query: 200 GSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ G+ I+ + S ++ G D L GG N + G
Sbjct: 576 GTEGDQIWGGIGWDTLRGSDGDDALWGGDGYDAL----GGGDGNDTLTGNNGADRLYGDR 631
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + +S+ G +G D + G++ + SGND G++G D F S +
Sbjct: 632 DDDHLIGGLNADSLWGGAGKDRLEGSAGADQLLGGSGNDQLFGNAGAD--FLQGDSGNDR 689
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ N V + D LS + + +++ A ++ L G
Sbjct: 690 LAGGINNDTVNGGS--GNDTLSG------DNGADQLIGGDGDDLIKGNAGHDTLDGGAGN 741
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYL 403
DV F G+D
Sbjct: 742 DVLSGGIGADRFIYGAGQDTILSFQN 767
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/253 (12%), Positives = 76/253 (30%), Gaps = 8/253 (3%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+L + + T + G + I+ + ++G+ GND ++G + + + +
Sbjct: 509 SLPTAPTPLVLVGTPQSDVLEGDAADDHISGRADGDRLIGAGGNDTILGEAGADTIYGNG 568
Query: 294 GNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
G+D+ +G + D ++ + + + + ++ +
Sbjct: 569 GSDLIEGGTEGDQIWGGIGWDTLRGSDGDDALWGGDGYDALGGGDGNDTLTGNNGADRLY 628
Query: 347 ADQCIDS-VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
D+ D + L A + L G D + + G D
Sbjct: 629 GDRDDDHLIGGLNADSLWGGAGKDRLEGSAGADQLLGGSGNDQLFGNAGADFLQGDSGND 688
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ N + +G + D ++ A H+ L + +
Sbjct: 689 RLAGGINNDTVNGGSGNDTLSGDNGADQLIGGDGDDLIKGNAGHDTLDGGAGNDVLSGGI 748
Query: 466 GKDHFSNFGCEEG 478
G D F ++
Sbjct: 749 GADRFIYGAGQDT 761
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 77/270 (28%), Gaps = 11/270 (4%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ + I D G TI + I G G
Sbjct: 529 EGDAADDHISGRADGDRLIGAGGNDTILGEAGADTIYGNGGSDLIEG----GTEGDQIWG 584
Query: 144 YPVYGVDNDYENDSFLTSVMSYFM-PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+ + D L Y D G + + G
Sbjct: 585 GIGWDTLRGSDGDDALWGGDGYDALGGGDGNDTLTGNNGADRLYGDRDDDHLIGGLNADS 644
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + + S + G+D L L G N + ++ G
Sbjct: 645 LWGGAG-KDRLEGSAGADQLLGGSGNDQLFGNAGADFLQGDSGNDRLAGGINNDTVNGGS 703
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N T++ + ++G G+D++ GN+ ++ +GNDV G G D F Y A
Sbjct: 704 GNDTLSGDNGADQLIGGDGDDLIKGNAGHDTLDGGAGNDVLSGGIGADRFIYGAGQDTIL 763
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFA 347
++ E + D+ LS + FA
Sbjct: 764 SFQNEIDTLSLDSALWGGGSLSMSQLQTFA 793
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/301 (13%), Positives = 81/301 (26%), Gaps = 41/301 (13%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG+ +DV+ G++A++ + D G+ G DT + IY + ++
Sbjct: 519 LVGTPQSDVLEGDAADDHISGRADGDRLIGAGGNDTIL--GEAGADTIYGNGGSDLIEGG 576
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
E + ++ L G D + G
Sbjct: 577 TEG--------------------------DQIWGGIGWDTLRGSDGDDALWGGDGYDALG 610
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
+G D + Y D + A + G L + ++
Sbjct: 611 GGDGNDTLTGNNGADRLYGDRDDDHLIGGLNADSLWGGAGKDRLEGSAGADQLLGGSGND 670
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
L G D + + + G + + G
Sbjct: 671 QLFGNAGADFLQGDSGNDRLAGGINNDTVNGGSGNDTLSGDNGADQLIGGD--------- 721
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
G + L+ A ++ L + AG+D +F E +++ +
Sbjct: 722 ---GDDLIKGNAGHDTLDGGAGNDVLSGGIGADRFIYGAGQDTILSF-QNEIDTLSLDSA 777
Query: 571 L 571
L
Sbjct: 778 L 778
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 45/360 (12%), Positives = 93/360 (25%), Gaps = 54/360 (15%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ ++ G ++ T+ T + + G G D + G + +++ + G D+ G SG D
Sbjct: 356 SGRVAAATGGDQADTLTGGTGGDLLSGGDGADHIAGRAGDDILRDGGGRDLLTGGSGRDL 415
Query: 307 FFYYAPSYLYKIYRFENAIIVYD---------ANEHKQDFLSDVERLRFADQCIDSVNVK 357
F A I F++A D ++ + L F ++ ++
Sbjct: 416 FVLSADGEADTIADFDSAQDSIDLSAWPFLRHGSQLTISSTKNGAVLSFGEERLEIKTSN 475
Query: 358 QRSI---------------------------------------LEYTASYEDLIQVIGQD 378
+S+ L T + L D
Sbjct: 476 GQSLSEDEVQALDLIGQSRFMPDWTLPEEADTPSLPTAPTPLVLVGTPQSDVLEGDAADD 535
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ G D Y + + + + G R D
Sbjct: 536 HISGRADGDRLIGAGGNDTILGEAGADTIYGNGGSDLIEGGTEGDQIWGGIGWDTLRGSD 595
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY--LYLGSYDDLR 496
AL ++ L + G D ++ ++ D L
Sbjct: 596 GDDALWGGDGYDALGGGDGNDTLTGNNGADRLYGDRDDDHLIGGLNADSLWGGAGKDRLE 655
Query: 497 NVFGSD----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G+D + + G + L +++ + + G D
Sbjct: 656 GSAGADQLLGGSGNDQLFGNAGADFLQGDSGNDRLAGGINNDTVNGGSGNDTLSGDNGAD 715
Score = 37.5 bits (85), Expect = 8.0, Method: Composition-based stats.
Identities = 39/328 (11%), Positives = 79/328 (24%), Gaps = 20/328 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
D + + + L S + G + I+ G D + G +
Sbjct: 318 GSTLDAVSALDFSVQGDLLHLAAASGAEAGLSIFTVDISGRVAA--ATGGDQADTLTGGT 375
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++ G D G +G D + + + + + D ++D
Sbjct: 376 GGDLLSGGDGADHIAGRAGDDILRDGGGR--DLLTGGSGRDLFVLSADGEADTIADF--- 430
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
D DS+++ L + + G E R S
Sbjct: 431 ---DSAQDSIDLSAWPFLRHGSQLTISSTKNGA----------VLSFGEERLEIKTSNGQ 477
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
S D+++ + + + + + + DA D
Sbjct: 478 SLSEDEVQALDLIGQSRFMPDWTLPEEADTPSLPTAPTPLVLVGTPQSDVLEGDAADDHI 537
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
G+ G Y + + + + G R D
Sbjct: 538 SGRADGDRLIGAGGNDTILGEAGADTIYGNGGSDLIEGGTEGDQIWGGIGWDTLRGSDGD 597
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKD 552
AL ++ L + G D
Sbjct: 598 DALWGGDGYDALGGGDGNDTLTGNNGAD 625
>gi|172055141|ref|YP_001806468.1| hypothetical protein cce_5056 [Cyanothece sp. ATCC 51142]
gi|171701422|gb|ACB54402.1| hypothetical protein cce_5056 [Cyanothece sp. ATCC 51142]
Length = 284
Score = 84.5 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI-TFNPDLYLTSY 576
G D F YIAS+ DLI AF +A DH+ G EGR FN YL +Y
Sbjct: 195 GGIVDNFDEHLYIASYGDLIQAFGYD---GEAALDHYLMMGATEGRDQHRFNAAQYLENY 251
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRA 604
D+ + +G + A +H+I +G EGR
Sbjct: 252 GDIRDTYGLNADLATKHFIANGFAEGRT 279
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
+ + + N G FD +LY+ SY DL FG D AA HY+
Sbjct: 170 VDPLTGELNSTITNQVLDLHNQNQLGGIVDNFDEHLYIASYGDLIQAFGYDGEAALDHYL 229
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
G EGR+ F A +Y+ ++ D+ + + DL HF G+ EGR+
Sbjct: 230 MMGATEGRDQHRFNAAQYLENYGDIRDTYGLNADL---ATKHFIANGFAEGRT 279
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-FDSY 402
L +Q V Y ASY DLIQ G D ++ H+ G +EGRD F++
Sbjct: 186 LDLHNQNQLGGIVDNFDEHLYIASYGDLIQAFGYDGEAALDHYLMMGATEGRDQHRFNAA 245
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
YL +Y D+R+ +G + A +H+I +G EGR
Sbjct: 246 QYLENYGDIRDTYGLNADLATKHFIANGFAEGRTYQD 282
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
D + + + + G D F YIAS+ DLI AF + DH
Sbjct: 171 DPLTGELNSTITNQVLDLHNQNQLGGIVDNFDEHLYIASYGDLIQAFGYDG---EAALDH 227
Query: 470 FSNFGCEEGRF-VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
+ G EGR F++ YL +Y D+R+ +G + A +H+I +G EGR
Sbjct: 228 YLMMGATEGRDQHRFNAAQYLENYGDIRDTYGLNADLATKHFIANGFAEGRT 279
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
FD +LY+ SY DL FG D AA HY+ G EGR+ F A +Y+ ++ D+ + +
Sbjct: 200 NFDEHLYIASYGDLIQAFGYDGEAALDHYLMMGATEGRDQHRFNAAQYLENYGDIRDTYG 259
Query: 458 DAPDLVQVGKDHFSNFGCEEGRF 480
DL HF G EGR
Sbjct: 260 LNADL---ATKHFIANGFAEGRT 279
>gi|149203814|ref|ZP_01880783.1| Hemolysin-type calcium-binding region, RTX [Roseovarius sp. TM1035]
gi|149142931|gb|EDM30973.1| Hemolysin-type calcium-binding region, RTX [Roseovarius sp. TM1035]
Length = 731
Score = 84.5 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/228 (15%), Positives = 68/228 (29%), Gaps = 11/228 (4%)
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G+ G+++ + + G+D ++ G N + +IGG
Sbjct: 448 GNSGDDVLRGEGGDDGVFGQSGNDILDGGAGND----SIAGADGNDLISGGLGNDNIGGG 503
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N TI + + G+D V G + N+V +G+D +G G D+
Sbjct: 504 LGNDTIDGGEGDDIIGAGFGDDSVTGGAGNDVVAGGAGDDTLEGGDGNDSM--SGSFGND 561
Query: 317 KIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
I E A + D + + + + + + L + +
Sbjct: 562 LIDGGEGADDIGGGTGRDTIDAGAGNDSVGGGEGDDSILGGEGNDFLAGGGRNDTIDGGA 621
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
G D + G D F + D+ F +
Sbjct: 622 GNDTINAGAGNDVITGGTGAD-QFVFSAFFDGEADVITDFEDGLDSFF 668
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 64/237 (27%), Gaps = 28/237 (11%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ T+ + GDD+L + G N +IA + +
Sbjct: 437 SVGTELADTLIGNSGDDVLRGEGGDDGV----FGQSGNDILDGGAGNDSIAGADGNDLIS 492
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND + G N+ G+D+ G D+ A A
Sbjct: 493 GGLGNDNIGGGLGNDTIDGGEGDDIIGAGFGDDSV-------------TGGAGNDVVAGG 539
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D L D +++ +D+ G+D ++ G
Sbjct: 540 AGDDTLEG------GDGNDSMSGSFGNDLIDGGEGADDIGGGTGRDTIDAGAGNDSVGGG 593
Query: 393 EGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
EG D D G D + G+D A G + F A
Sbjct: 594 EGDDSILGGEGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVITGGTGADQFVFSAFF 650
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 69/241 (28%), Gaps = 39/241 (16%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ ++++G+SG+DV+ G ++ F SGND+ DG +G D+
Sbjct: 439 GTELADTLIGNSGDDVLRGEGGDDGVFGQSGNDILDGGAGNDSI---------------- 482
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
A D +S + ++ + + G D
Sbjct: 483 ------AGADGNDLISG------GLGNDNIGGGLGNDTIDGGEGDDIIGAGFGDDSVTGG 530
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D + FG+D G + +
Sbjct: 531 AGNDVVAGGAGDDTL----EGGDGNDSMSGSFGNDLID-----GGEGADDIGGGTGRDTI 581
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGS 501
+ A ++ + D L G D + G + D+ D + G+
Sbjct: 582 DAGAGNDSVGGGEGDDSILGGEGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVITGGTGA 641
Query: 502 D 502
D
Sbjct: 642 D 642
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/225 (14%), Positives = 54/225 (24%), Gaps = 23/225 (10%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
S + LR IL+ A + + G D+ G G D
Sbjct: 450 SGDDVLRGEGGDDGVFGQSGNDILDGGAGNDSIAGADGNDLISGGLGNDNIGGGLGNDTI 509
Query: 399 FDSYLYLGSYDDLR-NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
G DD+ FG D G LE ++ + +F
Sbjct: 510 -----DGGEGDDIIGAGFGDDSVT-----GGAGNDVVAGGAGDDTLEGGDGNDSMSGSFG 559
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ G D + + G D + G A
Sbjct: 560 NDLIDGGEGADDIGGGTGRDTIDAGAGNDSVGGGEGDDSILGGEGNDFLA---------- 609
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
++ A ++ + + G D F + +G
Sbjct: 610 --GGGRNDTIDGGAGNDTINAGAGNDVITGGTGADQFVFSAFFDG 652
>gi|260428680|ref|ZP_05782658.1| bifunctional hemolysin/adenylate cyclase [Citreicella sp. SE45]
gi|260420274|gb|EEX13526.1| bifunctional hemolysin/adenylate cyclase [Citreicella sp. SE45]
Length = 601
Score = 84.5 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 60/235 (25%), Gaps = 10/235 (4%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
GG + T + G N T+A ++++G +D + G + ++ +G
Sbjct: 302 TGGDGADVLDGTIGHDRLSGSAGNDTLAGGAGDDTLIGGDDHDQLFGEAGDDSLDGGAGA 361
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G +G DT F + + D + +
Sbjct: 362 DTLWGDAGNDTIFGNTGVDEV----HGGLGDDWISPGDGVDIVHG------DGGNDTVIG 411
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
L ++ L GQD G D + Y +L N
Sbjct: 412 RTGWDTLWGDDGHDHLYGSEGQDDLHGGDGNDYLSGGFGYDFLWGDAGDDSLYGNLGNDS 471
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
Y G R L ++L D D F
Sbjct: 472 LDGGVGNDALYGATGNDTLRGGAGHDTLYSSQGVDELEGGPGDDLLFGGSLVDSF 526
Score = 84.5 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 69/243 (28%), Gaps = 23/243 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ S T+ GDD L L G + ++ G N TI
Sbjct: 315 GHDRLSGSAGNDTLAGGAGDDTLIGGDDHDQLFGEAGDDSLDGGAGADTLWGDAGNDTIF 374
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLY 316
+T ++ V G G+D + ++ GND G +G DT + Y
Sbjct: 375 GNTGVDEVHGGLGDDWISPGDGVDIVHGDGGNDTVIGRTGWDTLWGDDGHDHLYGSEGQD 434
Query: 317 KIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
++ + + + DFL + L L + L
Sbjct: 435 DLHGGDGNDYL--SGGFGYDFLWGDAGDDSLYGNLGNDSLDGGVGNDALYGATGNDTLRG 492
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYI 427
G D S + E G D+ F L G D+ F + +
Sbjct: 493 GAGHDTLYSSQGVDELEGGPGDDLLFGGSLVDSFHFAPGHGHDVIGDFEAHDRLCLDAAL 552
Query: 428 THG 430
G
Sbjct: 553 VGG 555
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/266 (13%), Positives = 66/266 (24%), Gaps = 27/266 (10%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
L E + + G+ + D G +
Sbjct: 294 AGLPSTERTGGDGADVLDGTIGHDRL-SGSAGNDTLAGGAGDDTLIGGDDHDQLFGEAGD 352
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDN------DYENDSFLTSVMSYFMPQDSMMDASFGY 179
+ G G ++G +D + D D G
Sbjct: 353 DSLDGGAGADTLWGDAGNDTIFGNTGVDEVHGGLGDDWISPGDGVDIVHGDGGNDTVIGR 412
Query: 180 CATPMVSDIVAVQKIYGA---PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
+ +YG+ G+ ++ GDD L
Sbjct: 413 TGWDTLWGDDGHDHLYGSEGQDDLHGGD----GNDYLSGGFGYDFLWGDAGDDSLY---- 464
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
S+ G N + T +++ G +G+D + + + G+D
Sbjct: 465 ---------GNLGNDSLDGGVGNDALYGATGNDTLRGGAGHDTLYSSQGVDELEGGPGDD 515
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G S +D+F + I FE
Sbjct: 516 LLFGGSLVDSFHFAPGHGHDVIGDFE 541
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 45/321 (14%), Positives = 73/321 (22%), Gaps = 60/321 (18%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF----------- 321
G ++ + + +++ F+ +G+D G +G D F + A I F
Sbjct: 227 GGDRSEALSAGAGDDLLFDGAGSDTLTGGTGADLFVFAADGSRDVITDFMETDMLGLPRV 286
Query: 322 ----------------ENAIIVYDANEHKQDFLSDV------------ERLRFADQCIDS 353
D LS + L D
Sbjct: 287 PRPVVTTAGLPSTERTGGDGADVLDGTIGHDRLSGSAGNDTLAGGAGDDTLIGGDDHDQL 346
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
L+ A + L G D E G D ++ G D+ +
Sbjct: 347 FGEAGDDSLDGGAGADTLWGDAGNDTIFGNTGVDEVHGGLG-----DDWISPGDGVDIVH 401
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
G + G D L +DL + G D
Sbjct: 402 GDGGNDTV----IGRTGWDTLWGDDGHDHLYGSEGQDDLHGGDGNDYLSGGFGYDFLWGD 457
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
++ Y +L N Y G R L
Sbjct: 458 AGDDSL------------YGNLGNDSLDGGVGNDALYGATGNDTLRGGAGHDTLYSSQGV 505
Query: 534 EDLINAFADAPDLVQAGKDHF 554
++L D + D F
Sbjct: 506 DELEGGPGDDLLFGGSLVDSF 526
>gi|15485206|emb|CAC67454.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 84.5 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 65/484 (13%), Positives = 118/484 (24%), Gaps = 47/484 (9%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D+ + G TI + LGL +G D
Sbjct: 282 GSRLNDRIAGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 341
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + +LG + Y
Sbjct: 342 SDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYY------ 395
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ ++ + + D+L G + + ++ G + + + + + G
Sbjct: 396 DNVRNVENVIGTSMKDVLI----GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYG 451
Query: 274 SSGNDVVIGNSANNVFFESSGND-----------VFDGSSGLDTFFYYAPSYLYKIYRFE 322
+GND + G ++ +GND V G G+DT Y I
Sbjct: 452 DAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGR 511
Query: 323 NAIIVY------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + D +S +E + + Q ++L +
Sbjct: 512 IGLGILADLGAGRVDKLGETGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 571
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS-DRGAAARHYITH 429
L G DV + GRD + + D N D G
Sbjct: 572 LAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFS 631
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G G + A + A H N V
Sbjct: 632 GPGRGLDAGAKGVFLSLGKG----FASLMDEPETSNVLRHIENAVGSARDDVLI------ 681
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D + G + L A ++DL D L
Sbjct: 682 ---GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQGDDTYLFGV 738
Query: 550 GKDH 553
G H
Sbjct: 739 GYGH 742
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 51/371 (13%), Positives = 95/371 (25%), Gaps = 32/371 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ T D D+ G G + + LG G
Sbjct: 415 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLG-DDTLEGGAGN 473
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+G E+D + Y T + I A + G
Sbjct: 474 DWFGQTQAREHDVLR----------GGDGVDTVDYSQTGAHAGIAAGRIGLGILADLGAG 523
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ K+ + + ++ L + G + + + G E + +
Sbjct: 524 RVDKLGETGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGEGDDVLLG 583
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------YLY 316
+ + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 584 GDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRDTVDFSGPGRGLDAGAKG 643
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ L +E + + + ++L A + L G
Sbjct: 644 VFLSLGKGFASLMDEPETSNVLRHIENAVGSARDDVLIGDAGANVLNGLAGNDVLSGGAG 703
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
DV + G D DL G D Y + E
Sbjct: 704 DDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGVGYGHDTIYESGG 750
Query: 437 PDAFKALEYIA 447
+ A
Sbjct: 751 GHDTIRINAGA 761
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/341 (13%), Positives = 80/341 (23%), Gaps = 46/341 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N +I + + G SG+D + G + N+ G + G +G D F
Sbjct: 157 IIGGAGNDSITGNAHDNFLAGGSGDDRLDGGAGNDTLVGGEGQNTVIGGAGDDVFLQDLG 216
Query: 313 SYLYKIYRFENAIIVYDA--------------------------------NEHKQDFLSD 340
+ ++ V N D + +
Sbjct: 217 VWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQKGTVEKWPALNLFSVDHVKN 276
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+E L + + + L + + G D+ +G DI
Sbjct: 277 IENLHGSRLNDRIAGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQ 336
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
DD+ G D + + + +A
Sbjct: 337 DDE--TVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDY 394
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
++ ++ + +G D G G
Sbjct: 395 YDNVRNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGD------------GDDLLFG 442
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D L A ++ L D AG D F E
Sbjct: 443 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTQARE 483
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/365 (11%), Positives = 73/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSRLNDRIAGDDRDNELWGHDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHPGRIVAPHEYGFGIEADLSREWVRKASALGVDYYDNV 398
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+VE + Q + + + L G D+
Sbjct: 399 RNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 458
Query: 390 GLSEGRDITFDSYL------YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 459 YGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGRIGLGILA 518
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 519 DLGAGRVDKLGETGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 576
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 577 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGRD 626
Query: 564 SITFN 568
++ F+
Sbjct: 627 TVDFS 631
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/333 (13%), Positives = 81/333 (24%), Gaps = 47/333 (14%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA--- 131
+ + +F + + DV R G G T+ G A
Sbjct: 452 DAGNDTLYGGLGDDTLEGGAGNDWFGQTQAREHDVLRGGDGVDTVDYSQTGAHAGIAAGR 511
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+GL G + ++ + + + + + V
Sbjct: 512 IGLGILADLGAGRVDKLGETGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADV 571
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
LG + + Q +Y GDD N +D +
Sbjct: 572 LAGGEGDDVLLGGD---GDDQLSGDAGRDRLYGEAGDDWF-FQDAANAGNLLDGGDGRDT 627
Query: 252 SIGGYEKNMTIAQHTV------------------------IESVVGSSGNDVVIGNSANN 287
A IE+ VGS+ +DV+IG++ N
Sbjct: 628 VDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRHIENAVGSARDDVLIGDAGAN 687
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
V +GNDV G +G D + ++
Sbjct: 688 VLNGLAGNDVLSGGAGDD--VLLGDEGSDLLSGDAGNDDLFGGQGDDTYLF--------- 736
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
V +I E ++ + G D
Sbjct: 737 -----GVGYGHDTIYESGGGHDTIRINAGADQL 764
>gi|261392326|emb|CAX49853.1| FrpA/C protein [Neisseria meningitidis 8013]
Length = 1012
Score = 84.5 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 83/535 (15%), Positives = 148/535 (27%), Gaps = 63/535 (11%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 448 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 507
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 508 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 567
Query: 188 --IVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y +Y + GDDLL+ G N
Sbjct: 568 VLDVATVKELVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDAGNDS 623
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G+ GND + G N+ +GND +G SG
Sbjct: 624 IYSGNGNDTLDGGEGNDALYGYNGNDALNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 683
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT+ + +Y ++ A D +RF D +
Sbjct: 684 SDTYVFGEGFGQDTVYNYDYATGRKD-------------IIRFTDGITADML-----TFT 725
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
++ + G +F G +Y + D V
Sbjct: 726 REGNHLLIKAKDGSGQVTVQSYFQNDGSG--------AYRIDEIHFDNGKVLDVATVKEL 777
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
T G + L + L A D G D
Sbjct: 778 VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLNGDAGND--------------- 822
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
+Y G+ +D N + Y +G + L ++ LI +
Sbjct: 823 --SIYSGNGNDTLNGGEGNDAL----YGYNGNDVLNGAEGNDHLNGEDGNDTLIGGAGND 876
Query: 544 PDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+G D + FG G+ +N ++ D + G AA H+I G
Sbjct: 877 YLEGGSGSDTYV-FGKGFGQDTVYN--YHVDKNSDTMHFKG--FKAADVHFIRSG 926
>gi|304311993|ref|YP_003811591.1| Hemolysin-type calcium-binding protein [gamma proteobacterium HdN1]
gi|301797726|emb|CBL45948.1| Hemolysin-type calcium-binding protein [gamma proteobacterium HdN1]
Length = 3043
Score = 84.5 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 84/557 (15%), Positives = 146/557 (26%), Gaps = 77/557 (13%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT----ILSHNALHEIG-- 129
G + + D GIG T S +G
Sbjct: 2390 GGGGNDNLYGYGGDDRLNGGADNDTLSGAEGNDTLNGGIGNDTLQGSYGSDTYCFNLGDG 2449
Query: 130 ------------------------HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
A L S N G + D S S +Y
Sbjct: 2450 QDRIEEYMASNGTDIDRIVFGAGIAANDLALSVSGNNLVITVGSNGDSLTISNWYSSSNY 2509
Query: 166 FMPQDSMMDASFGYCATPM-----VSDIVAVQKIYGAPKGSL------GNNI---YKIEV 211
+ + + D + + + + +A +YG + GN+ Y
Sbjct: 2510 RVEEFELDDGTVLNAQSLLEGHVVSGNDLANT-LYGNDVVADWLGGGGGNDTLYGYSGND 2568
Query: 212 QQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
T+ G+D D+ + +N+ +G +N+T+ +
Sbjct: 2569 MLDGGVGNDTLVGGIGNDTYVVDSLSDVVTESASQGIDTVNSSITWVLGTNLENLTLFGN 2628
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
I + G++ N+++ GN A+NV G+DV G G DT+ Y+I E
Sbjct: 2629 GAI-NGTGNTLNNIITGNDADNVLTGGRGSDVLIGRKGNDTYVVD--DINYQIVEAEAEG 2685
Query: 326 IVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ +VE L I+ +Q + L ++ L + G DV +
Sbjct: 2686 TDVVQSSLTWTLAQNVENLTLTGTTAINGTGNQQANSLIGNSASNRLEGLEGNDVLDGGA 2745
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR----NPDAF 440
G DI + G D + Y E AF
Sbjct: 2746 GADAMVGGLGDDIYYLEN--TADKVIELAQQGMDTIYSKFSYTLVDNAENLVLQSGLFAF 2803
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
A + N + G D G + V + + + G
Sbjct: 2804 NATGNALDNTITGNDLYGNIIDGKAGADTMMGLGGGDTYIVDNANDQVIEN-----VNAG 2858
Query: 501 SDRGAAARHYITHGVKEGRNPDA-----------FKALEYIASHEDLINAFADAPDLVQA 549
+D A+ + E + ++ L A
Sbjct: 2859 TDLVRASVTFSLSDNVENLVLTGASAISGNGNQLNNQITGNSAANTLDGKEGTDILTGGA 2918
Query: 550 GKDHFSNFGYEEGRSIT 566
G D + +I
Sbjct: 2919 GNDAYLMGRGYGSDTIV 2935
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 56/407 (13%), Positives = 103/407 (25%), Gaps = 14/407 (3%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
S + N Y + D G G T+ +
Sbjct: 1877 VSGTETDDTVRGNETYNDQLAGGGGNDNLYGYGGNDSLDGGAGNDTLSGEEGNDTLIGGT 1936
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G + G Y + Y D + S D + + + +V
Sbjct: 1937 G-NDTLQGSYGSDTYRFNLGYGQDRIEEYMASNGTDVDRIAFGAGITANDLAL----SVS 1991
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL--------IGGVKNYID 244
+ I + + ++ LL+ V I
Sbjct: 1992 GNNLVITVGTNGDSLTINNWYNSASYRVEEFELADGTLLNAQSLLEGRGVSGSEVAETIH 2051
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
N + G N T+ + + + G +G+D + G N+ GND GS G
Sbjct: 2052 GNNSYNDQLAGRGGNDTLYGYAGDDLLDGGTGDDTLSGAEGNDTLIGGVGNDTLQGSYGS 2111
Query: 305 DTFFYYAPSYLYKIYRF-ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT+ + +I + + D ++ L + + L
Sbjct: 2112 DTYRFNLGDGQDRIEEYMASNGTDIDRIVFGAGITANDLALSVSGNHLVITIGNTGDSLT 2171
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
Y + + L EGR ++ ++ N + RG
Sbjct: 2172 INNWYSSSTYRVEEFELADGTVLNAQSLLEGRVVSGSESAETIHGNNSYNDQLAGRGGND 2231
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
Y G + L ++ LI + G D +
Sbjct: 2232 TLYGYAGDDLLDSGTGDDTLSGAEGNDSLIGGAGNDILQGSYGSDTY 2278
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 75/565 (13%), Positives = 135/565 (23%), Gaps = 88/565 (15%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
F + D + S+ T D A+V G TI + I
Sbjct: 1363 FANAASMVDGFWFSNGWYLTGTSALAHAAANWNGLDSAEVMNGYSGNDTIYGNGGDDNIN 1422
Query: 130 HALG-----LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
G H Y G D S + +D + S
Sbjct: 1423 GGDGSDVLVGGHGNDYLTGGAGRDTYRFDIGDGHDVISGSTNLNEDRLELGSTTSLGNVG 1482
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG--------------GDDL 230
+ +Y ++ Y + + D G
Sbjct: 1483 FRRVGDNLVVYLDSNSTITVQSYFSANDPARALSSIRLGDGTVLSRSDVIANLPRTGTSQ 1542
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D + G + + SI N T+ + + + G GND+V+G +
Sbjct: 1543 ADAITLIGEVDDSVSGLDGDDSIAAMGGNDTVNGNAGNDRLDGGFGNDIVVGGDGQDTLI 1602
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--ENAIIVYDANEHKQDFLSD-------- 340
+G+D G G DT+ + +I A D +
Sbjct: 1603 GGTGSDTLQGGYGSDTYRFNLGDGQDRIEENMASGAGTDRDRIVFGTGISENDLIFSLAG 1662
Query: 341 ----------------------------VERLRFADQCI-----------DSVNVKQRSI 361
+E L FAD + + +
Sbjct: 1663 RDLVITIGSGGDQIVISNSYASDNYRYRIEELEFADGAVVNVATLLENNLVVGSYVADQL 1722
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + + G D + G D D+L G+D +
Sbjct: 1723 YGADGTNDYIGGADGDDTLNGLTGNDRLMGGAGNDTLMGGDG----NDELAGGVGND--S 1776
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHED------LINAFADAPDLVQVGKDHFSNFGC 475
Y + + + EY+AS+ A + +H
Sbjct: 1777 LQGSYGSDTYRFNQGDGQDWIEEYMASNGTDIDRIVFGAGIAVNDLTLSTSGNHLVITVG 1836
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA--------FKAL 527
G +T +++ +Y A+ + + G D L
Sbjct: 1837 TNGDSLTINNWYTSSTYRVETFELADGTVLTAQSLLEGRMVSGTETDDTVRGNETYNDQL 1896
Query: 528 EYIASHEDLINAFADAPDLVQAGKD 552
+++L + AG D
Sbjct: 1897 AGGGGNDNLYGYGGNDSLDGGAGND 1921
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 65/545 (11%), Positives = 122/545 (22%), Gaps = 86/545 (15%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+G D G G T++ + E+ +G G
Sbjct: 1724 GADGTNDYIGGADGDDTLNGLTGNDRLMGGAGNDTLMGGDGNDELAGGVGNDSLQGSYGS 1783
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
D ++ + + A + + + G G
Sbjct: 1784 DTYRFNQGDGQDWIEEYMASNGTDIDRIVFGAGIAVNDLTLSTSGNHLVITVGTN----G 1839
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+++ + ++T + G + + + G N +A
Sbjct: 1840 DSLTINNWYTSSTYRVETFELADG--TVLTAQSLLEGRMVSGTETDDTVRGNETYNDQLA 1897
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI----- 318
+++ G GND + G + N+ GND G +G DT S Y+
Sbjct: 1898 GGGGNDNLYGYGGNDSLDGGAGNDTLSGEEGNDTLIGGTGNDTLQGSYGSDTYRFNLGYG 1957
Query: 319 -------------------------------YRFENAIIVYDANEHKQDFLSD------- 340
N +++ +++
Sbjct: 1958 QDRIEEYMASNGTDVDRIAFGAGITANDLALSVSGNNLVITVGTNGDSLTINNWYNSASY 2017
Query: 341 -VERLRFADQCI--------------------DSVNVKQRSILEYTASYEDLIQVIGQDV 379
VE AD + N L + L G D+
Sbjct: 2018 RVEEFELADGTLLNAQSLLEGRGVSGSEVAETIHGNNSYNDQLAGRGGNDTLYGYAGDDL 2077
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR-----GAAARHYITHGVKEG 434
+ +EG D D L+ +GSD G + G
Sbjct: 2078 LDGGTGDDTLSGAEGNDTLIGGVG----NDTLQGSYGSDTYRFNLGDGQDRIEEYMASNG 2133
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ D I +++ ++ + + L
Sbjct: 2134 TDIDRIVFGAGITANDLALSVSGNHLVITIGNTGDSLTINNWYSSSTYRVEEFELADGTV 2193
Query: 495 LRN-------VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
L V A H + L A + L + D
Sbjct: 2194 LNAQSLLEGRVVSGSESAETIHGNNSYNDQLAGRGGNDTLYGYAGDDLLDSGTGDDTLSG 2253
Query: 548 QAGKD 552
G D
Sbjct: 2254 AEGND 2258
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 67/541 (12%), Positives = 124/541 (22%), Gaps = 83/541 (15%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
+ N + + D D G G T+ LG
Sbjct: 1570 GNDTVNGNAGNDRLDGGFGNDIVVGGDGQDTLIGGTGSDTLQGGYGSDTYRFNLG----D 1625
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+ + D + + D + + Y +
Sbjct: 1626 GQDRIEENMASGAGTDRDRIVFGTGISENDLIFSLAGRDLVITIGSGGDQIVISNSYASD 1685
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
I ++E + T+ ++ +L + V + + + IGG +
Sbjct: 1686 NYRY--RIEELEFADGAVVNVATLLEN------NLVVGSYVADQLYGADGTNDYIGGADG 1737
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL--- 315
+ T+ T + ++G +GND ++G N+ GND GS G DT+ +
Sbjct: 1738 DDTLNGLTGNDRLMGGAGNDTLMGGDGNDELAGGVGNDSLQGSYGSDTYRFNQGDGQDWI 1797
Query: 316 -----------------------YKIYRFENAIIVYDANEHKQDFLSD---------VER 343
+V + + VE
Sbjct: 1798 EEYMASNGTDIDRIVFGAGIAVNDLTLSTSGNHLVITVGTNGDSLTINNWYTSSTYRVET 1857
Query: 344 LRFADQCI--------------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
AD + N L ++L G D +
Sbjct: 1858 FELADGTVLTAQSLLEGRMVSGTETDDTVRGNETYNDQLAGGGGNDNLYGYGGNDSLDGG 1917
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT-----HGVKEGRNPD 438
EG D D L+ +GSD Y + G + D
Sbjct: 1918 AGNDTLSGEEGNDTLIGGTG----NDTLQGSYGSDTYRFNLGYGQDRIEEYMASNGTDVD 1973
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSN----FGCEEGRFVTFDSYLYLGSYDD 494
I +++ ++ + + + R F+
Sbjct: 1974 RIAFGAGITANDLALSVSGNNLVITVGTNGDSLTINNWYNSASYRVEEFELADGTLLNAQ 2033
Query: 495 LRNVFGSDRGAAAR---HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
G+ H + L A + L D G
Sbjct: 2034 SLLEGRGVSGSEVAETIHGNNSYNDQLAGRGGNDTLYGYAGDDLLDGGTGDDTLSGAEGN 2093
Query: 552 D 552
D
Sbjct: 2094 D 2094
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 66/546 (12%), Positives = 129/546 (23%), Gaps = 77/546 (14%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
S + I NN Y + D+ G G T+ +
Sbjct: 2205 VSGSESAETIHGNNSYNDQLAGRGGNDTLYGYAGDDLLDSGTGDDTLSGAEGNDSLIGGA 2264
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G D ++ + + A + +
Sbjct: 2265 GNDILQGSYGSDTYRFNLGDGQDRIEEYMASNGTDIDRIVFGAGIFANDLALSVSGNNLV 2324
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G + G+++ + ++ + G + T + + +
Sbjct: 2325 ITVG----NSGDSLTINNWYSSSNYRVEEFELADG--TVLNTQSLLEGFVVAGTDAADTV 2378
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G N +A +++ G G+D + G + N+ + GND +G G DT
Sbjct: 2379 YGNNAYNDQLAGGGGNDNLYGYGGDDRLNGGADNDTLSGAEGNDTLNGGIGNDTLQGSYG 2438
Query: 313 SYLY------------------------------------KIYRFENAIIVYDANEHKQD 336
S Y + N +++ +
Sbjct: 2439 SDTYCFNLGDGQDRIEEYMASNGTDIDRIVFGAGIAANDLALSVSGNNLVITVGSNGDSL 2498
Query: 337 FLSD--------VERLRFADQCIDSVNVK--------------------QRSILEYTASY 368
+S+ VE D + + L
Sbjct: 2499 TISNWYSSSNYRVEEFELDDGTVLNAQSLLEGHVVSGNDLANTLYGNDVVADWLGGGGGN 2558
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L G D+ + G D L G D ++ ++
Sbjct: 2559 DTLYGYSGNDMLDGGVGNDTLVGGIGNDTY--VVDSLSDVVTESASQGIDTVNSSITWVL 2616
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
E A+ + + I DA +++ G+ G + D Y
Sbjct: 2617 GTNLENLTLFGNGAINGTGNTLNNIITGNDADNVLTGGRGSDVLIGRKGNDTYVVDDINY 2676
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH--EDLINAFADAPDL 546
G+D ++ + E A+ + LI A
Sbjct: 2677 ---QIVEAEAEGTDVVQSSLTWTLAQNVENLTLTGTTAINGTGNQQANSLIGNSASNRLE 2733
Query: 547 VQAGKD 552
G D
Sbjct: 2734 GLEGND 2739
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 83/281 (29%), Gaps = 5/281 (1%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ GDD + +GG N I G N ++ T +
Sbjct: 1025 NDVINALAGNDQVFGKTGDDEI----LGGAGNDAISGDGGADRIFGGTGNDQLSGGTEDD 1080
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G SG+D + G++ N++ S+G+D+ G +G D + + L I ++
Sbjct: 1081 VLYGESGHDTLSGDAGNDILVGSTGDDLLIGGAGNDIYLFNVGDGLDVIDNRGSSNDDDV 1140
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ DV+ R + + VN I + + ++ E
Sbjct: 1141 LRLGEGIRSQDVKLWRSGNNLVIEVNSGTDEISVSNYFSPNAPSIDRIIFQDAGSELSEI 1200
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH-YITHGVKEGRNPDAFKALEYIAS 448
++ I + + D Y G L +
Sbjct: 1201 TSAQIEVIVKSATEGSDQLHGTAGIDVFDGLNGDDTIYGHDGNDTLSGSGGNDTLMGGYA 1260
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
++ L + + G D ++ S YL
Sbjct: 1261 NDVLRGGEGNDSLNGENGNDTLDGGVGDDYLSGGAGSDTYL 1301
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 69/554 (12%), Positives = 133/554 (24%), Gaps = 80/554 (14%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH-EIGHALG 133
+ T D+ + + D+ G G L + ++ G
Sbjct: 1074 SGGTEDDVLYGESGHDTLSGDAGNDILVGSTGDDLLIGGAGNDIYLFNVGDGLDVIDNRG 1133
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV---- 189
+ + S V+ D + +++ P + I+
Sbjct: 1134 SSNDDDVLRLGEGIRSQDVKLWRSGNNLVIEVNSGTDEISVSNYFSPNAPSIDRIIFQDA 1193
Query: 190 --AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ +I A + + + Q + I GDD + G N +
Sbjct: 1194 GSELSEITSAQIEVIVKSATEGSDQLHGTAGIDVFDGLNGDDTI----YGHDGNDTLSGS 1249
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--FDGSSGLD 305
++ G N + +S+ G +GND + G ++ +G+D D +SG D
Sbjct: 1250 GGNDTLMGGYANDVLRGGEGNDSLNGENGNDTLDGGVGDDYLSGGAGSDTYLIDANSGSD 1309
Query: 306 -------------------------------------TFFYYAPSYLYKIY-RFENAIIV 327
T Y + I F NA +
Sbjct: 1310 VIQDYDATGNDYDKVSFGSGITAQNLTFSRKNNDVCVTVNYNGDQSSFVIANGFANAASM 1369
Query: 328 YDANEHKQD-FLSDVERLRFA-------DQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D +L+ L A D + +++ G DV
Sbjct: 1370 VDGFWFSNGWYLTGTSALAHAAANWNGLDSAEVMNGYSGNDTIYGNGGDDNINGGDGSDV 1429
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS-DRGAAARHYITHGVKEGRNPD 438
GRD +G D+ + + + T G
Sbjct: 1430 LVGGHGNDYLTGGAGRDTY---RFDIGDGHDVISGSTNLNEDRLELGSTTSLGNVGFRRV 1486
Query: 439 AFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ Y+ S+ + + F+ + + V + S D
Sbjct: 1487 GDNLVVYLDSNSTITVQSYFSANDPARALSSIRLGDGTVLSRSDVIANLPRTGTSQADAI 1546
Query: 497 NVFG---------------SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
+ G + G G + + LI
Sbjct: 1547 TLIGEVDDSVSGLDGDDSIAAMGGNDTVNGNAGNDRLDGGFGNDIVVGGDGQDTLIGGTG 1606
Query: 542 DAPDLVQAGKDHFS 555
G D +
Sbjct: 1607 SDTLQGGYGSDTYR 1620
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 59/477 (12%), Positives = 120/477 (25%), Gaps = 49/477 (10%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ DV G G ++ + + +G H +
Sbjct: 869 YGDAGNNYLFGLDGNDQLSGNAGNDVLDGGTGDDVLIGGSGNDQFRFGVGYGH----DRV 924
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY---GAPKG 200
V Y+ S + + + + D + D++ V+ + GA
Sbjct: 925 RTQDTVTGRYDVISIVGGITAADVSITRQAD--DLVISILGTDDVLRVEGHFSQEGASHS 982
Query: 201 SLGNNIYKIEVQQKDS--PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ ++ F S D + G N + + G
Sbjct: 983 YVDAIVFSDGTTINVGVSEFNNINVSSQVISDADNEIHGTSDNDVINALAGNDQVFGKTG 1042
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ I +++ G G D + G + N+ + +DV G SG DT + +
Sbjct: 1043 DDEILGGAGNDAISGDGGADRIFGGTGNDQLSGGTEDDVLYGESGHDTL--SGDAGNDIL 1100
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++ + + V I +S +D D
Sbjct: 1101 VGSTGDDLLIGGAGNDIYLFN--------------VGDGLDVIDNRGSSNDD-------D 1139
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
V + + R G+ + G+D + + ++ + R
Sbjct: 1140 VLRLGEGIRSQDVKLWRS---------GNNLVIEVNSGTDEISVSNYFSPNAPSIDRIIF 1190
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
E I + + +G D+ D L
Sbjct: 1191 QDAGSELSEITSAQIEVIVKSATEGSDQLHGTAGIDVFDGLNGD-DTIYGHDGNDTLSGS 1249
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G+D + R + +L ++ L D AG D +
Sbjct: 1250 GGNDTLM-----GGYANDVLRGGEGNDSLNGENGNDTLDGGVGDDYLSGGAGSDTYL 1301
>gi|258544121|ref|ZP_05704355.1| iron-regulated protein FrpC [Cardiobacterium hominis ATCC 15826]
gi|258520629|gb|EEV89488.1| iron-regulated protein FrpC [Cardiobacterium hominis ATCC 15826]
Length = 1082
Score = 84.5 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 85/579 (14%), Positives = 155/579 (26%), Gaps = 72/579 (12%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D +NN D D DV G G ++ + + G
Sbjct: 317 DGDDTLRGNNN--ANYLYGDKGNDALNGGDGNDVLHGGEGDDSLGGDSGDDVLHGNEGND 374
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV------ 189
H G + G D + +Y D Y +D +
Sbjct: 375 HLYGGAGHDTLDGGAGDDHLEGGDVESDTYQFRAGHGKDTVTDYAHNDEQADTLRFKGAQ 434
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK----NYIDL 245
A + + L Y + + + S + D + + +
Sbjct: 435 AEKAAFAREGYDLVVKAYGGDDRVALKDYFYGDNYSRYNFHFDDSKLSREDLIKKGFDFT 494
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+TE+ + G+ + TI +++ G GND + G+S N+ GNDV G G D
Sbjct: 495 STENNDYLQGWYSDDTIHGGAGDDTLYGYGGNDTLHGDSGNDGLSGGYGNDVLHGGEGND 554
Query: 306 TFF-------YYAPSYLYKIYRF-ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ + ++ + H +D ++D R + +
Sbjct: 555 HLYGEAGHDTLDGGAGDDQLEGGIYESDTYLFRTGHGKDTVTDYARNDEQADTLRFEGAQ 614
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG- 416
+ Y+ +++ G D ++K ++ +E FD LG D ++ F
Sbjct: 615 AEKAVFAHEGYDLVVKAYGGDDRVTLKDYFISSSNERYHFQFDDNK-LGREDLIKKAFDF 673
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ R + L ++ L + G D +
Sbjct: 674 TGTENNDRLVGWYSDDAIHGGAGDDTLYGYDGNDTLHGDSGNDGLSGGDGNDVLHGGEGD 733
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ G D G H L A H+ L
Sbjct: 734 DSL--------------------GGDSGDDVLHGNE----------GNDHLYGRAGHDTL 763
Query: 537 INAFADAPDLVQA------------GKDHFSNFGYEE--GRSITFN------PDLYLTSY 576
D A GKD ++GY + ++ F Y
Sbjct: 764 DGGAGDDHLEGGAVESDTYQFRAGHGKDTVKDYGYNDEQADTLRFEGAQAEKAAFAREGY 823
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSV 615
D + +G D + Y + FK+
Sbjct: 824 DLVVKAYGGDDRVTLKDYFFSSTNDRYHFQFDDATFKAA 862
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/400 (14%), Positives = 99/400 (24%), Gaps = 10/400 (2%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
G T DS DV G G + + G
Sbjct: 513 GGAGDDTLYGYGGNDTLHGDSGNDGLSGGYGNDVLHGGEGNDHLYGEAGHDTLDGGAGDD 572
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
Y + D+ + + + A V K Y
Sbjct: 573 QLEGGIYESDTYLFRTGHGKDTVTDYARNDEQADTLRFEGAQAEKAVFAHEGYDLVVKAY 632
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD--LTLIGGVKNYIDLNTESWSSI 253
G + Y I + F G +DL+ G N + S +I
Sbjct: 633 GGDDRVTLKD-YFISSSNERYHFQFDDNKLGREDLIKKAFDFTGTENNDRLVGWYSDDAI 691
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + T+ + +++ G SGND + G N+V G+D G SG D +
Sbjct: 692 HGGAGDDTLYGYDGNDTLHGDSGNDGLSGGDGNDVLHGGEGDDSLGGDSGDD--VLHGNE 749
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL-- 371
+Y + VE + + + + L
Sbjct: 750 GNDHLYGRAGHDTLDGGAGDDHLEGGAVESDTYQFRA-GHGKDTVKDYGYNDEQADTLRF 808
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ + + + + G D +T Y + + D F AA
Sbjct: 809 EGAQAEKAAFAREGYDLVVKAYGGDDRVTLKDYFFSSTNDRYHFQFDDATFKAAELRGKD 868
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
EG + A+ D A +
Sbjct: 869 LPTEGLKAPVAATAQADAATPDSATAAVTPQEKAATATTD 908
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/265 (17%), Positives = 82/265 (30%), Gaps = 15/265 (5%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
GDD L G + ++ G + N + +S+ G SG+DV+ G
Sbjct: 314 IGKDGDDTL----RGNNNANYLYGDKGNDALNGGDGNDVLHGGEGDDSLGGDSGDDVLHG 369
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFF-YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
N N+ + +G+D DG +G D S Y+ V D + D +D
Sbjct: 370 NEGNDHLYGGAGHDTLDGGAGDDHLEGGDVESDTYQFRAGHGKDTVTDYAHN--DEQADT 427
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQV----IGQDVFESMKHFYEFGLSEGRDI 397
R + A + + ++ +D + + G + HF + LS I
Sbjct: 428 LRFKGAQAEKAAFAREGYDLVVKAYGGDDRVALKDYFYGDNYSRYNFHFDDSKLSREDLI 487
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
+D + SD + G L + ++ L +
Sbjct: 488 KKGFDFTSTENNDYLQGWYSDDTI----HGGAGDDTLYGYGGNDTLHGDSGNDGLSGGYG 543
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT 482
+ G DH +
Sbjct: 544 NDVLHGGEGNDHLYGEAGHDTLDGG 568
>gi|99082530|ref|YP_614684.1| hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
gi|99038810|gb|ABF65422.1| Hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
Length = 767
Score = 84.5 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 51/350 (14%), Positives = 86/350 (24%), Gaps = 41/350 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
SD + T D D D G G I I
Sbjct: 129 EGSDNNDSLTGGTGNDTLSGDQGDDTLRGGDGDDYLTGGEGNDNIDGGTGNDTIR----- 183
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP---QDSMMDASFGYCATPMVSDIVAV 191
G G + LT S P + Y AT D
Sbjct: 184 ---GDNAWTNTSSGASGASTTPTTLTVTNSADGPIELWWIDETGTAQYYATLQPGDTR-N 239
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Q + L + + +P + S G + D G + ID
Sbjct: 240 QSTFEEHNWILRHPDGWYLEYIEGAPNQTVNFGSAGLN--DTVYAGAGNDLID-GMYGDD 296
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N TI +++ G +G+D++ G ++ +G+D G +G D+ +
Sbjct: 297 LLYGEGNNDTIYGDYGSDTIYGGAGDDLLYGGDGDDTLAGGTGSDTMYGGAGNDSMVGFD 356
Query: 312 PSYLYKIYRFENAIIVYDANEHKQD--------------FLSDVERLRFADQCIDSVNVK 357
+ + + + D + E D ++
Sbjct: 357 DADTFILEDGFGNDTIVGGEGGTDDDFVDLSNLTSGVTVTYTGDEAGTITDGS-NTAEFS 415
Query: 358 QRSILEYTASYEDL-----------IQVIGQDVFESMKHFYEFGLSEGRD 396
+ + T + L G D G D
Sbjct: 416 EIERIRLTDQADVLDASASLVGVDVDAGAGADTLTGSAGDDSLTGGTGDD 465
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 59/445 (13%), Positives = 117/445 (26%), Gaps = 75/445 (16%)
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPM-VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
+T+ + + + + +P D + Y + I +
Sbjct: 36 MTTYVVHGTNYNDPSFWASISEGSPGHTLDFTGLPPNYEININAEAKTISIWDGTS---- 91
Query: 218 FIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
++ +SG G + + + L S I G + N ++ T +++ G
Sbjct: 92 -WYSVGESGNTGTNATLGSPTLVDDFTVILANNSDDYIEGSDNNDSLTGGTGNDTLSGDQ 150
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF----YYAPSYLYKIYRFENAIIVYDAN 331
G+D + G ++ GND DG +G DT + S + +
Sbjct: 151 GDDTLRGGDGDDYLTGGEGNDNIDGGTGNDTIRGDNAWTNTSSGASGASTTPTTLTVTNS 210
Query: 332 EHKQDFLSDV--------------------------------------ERLRFA-DQCID 352
L + E + A +Q ++
Sbjct: 211 ADGPIELWWIDETGTAQYYATLQPGDTRNQSTFEEHNWILRHPDGWYLEYIEGAPNQTVN 270
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
+ + A + + + G D+ + G D Y G+ DDL
Sbjct: 271 FGSAGLNDTVYAGAGNDLIDGMYGDDLLYGEGNNDTIYGDYGSDTI-----YGGAGDDLL 325
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
D A + A ++ ++ +++ G + +
Sbjct: 326 YGGDGDDTLA-------------GGTGSDTMYGGAGNDSMVGFDDADTFILEDGFGNDTI 372
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
G E G F L S G + G T E + + +
Sbjct: 373 VGGEGGTDDDFVDLSNLTS-GVTVTYTGDEAGTITDGSNTAEFSEIERIRLTDQADVLDA 431
Query: 533 HE-----DLINAFADAPDLVQAGKD 552
D+ AG D
Sbjct: 432 SASLVGVDVDAGAGADTLTGSAGDD 456
>gi|115345580|ref|YP_771762.1| iron-regulated protein frpC, putative [Roseobacter denitrificans OCh
114]
gi|115292901|gb|ABI93354.1| iron-regulated protein frpC, putative [Roseobacter denitrificans OCh
114]
Length = 2517
Score = 84.5 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 60/487 (12%), Positives = 120/487 (24%), Gaps = 18/487 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ T D + D D G G + + + + LG
Sbjct: 1958 GGLGNDTLNGGEGNDTIFGDEGNDIIFGGDGDDTINSGSGNDNVDAGDGADIVEGGLGND 2017
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + G + D+ + Y + + + + V
Sbjct: 2018 LLNGGTGIDTLLGGAGNDTLDAEDGTDGVYLLQAQILRGGTGDDIYRISANAGDVVIDAA 2077
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD-----LLDLTLIGGVKNYIDLNTESW 250
G + + + ++ D +I+DSG L G S
Sbjct: 2078 GEAEVGGTDRVEFYDLALSD--ITVSIWDSGNAVDGVMLTLSWNKGGQSGTAYFAQLGSR 2135
Query: 251 SSIGGYEKNMTIAQHTVIESVV---GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + I IES + G+ G D +IG++ + SG+D+ G G D
Sbjct: 2136 VEVFEFAGGQVIPISEFIESGLVRLGTDGTDNLIGSAGADTLEGGSGDDLLKGFGGAD-- 2193
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTA 366
+ ++ + I+ + F + ++ + L
Sbjct: 2194 VLDGGNGYDQLSGGQGDDILKGGADDDVLFGEEGDDGIQGGNGEDTLNGGLGNDTLNGGE 2253
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + G D G D+ ++ D + G D A +
Sbjct: 2254 GNDTFMGGEGDDTVFGQDGNDIIDGGAGNDVLRGNFGD----DTINGGAGDDFLAGSGGS 2309
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ G + + + + + V G D G
Sbjct: 2310 DLITGGAGNDTGYGGDGDDILQGGTGEDSFSGNDGNDVIEGGDSDDTLFGNNGADTLLGG 2369
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
N S + + +E ++DL +
Sbjct: 2370 QGDDFMGGGGGNDILSGEDGNDTMFGGSNDDVLHGGEGNDRIEGQQQNDDLFGQNGNDIL 2429
Query: 546 LVQAGKD 552
G D
Sbjct: 2430 RGGDGSD 2436
Score = 79.1 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 76/305 (24%), Gaps = 30/305 (9%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + GDD+L GG + + E I G T+
Sbjct: 2189 FGGADVLDGGNGYDQLSGGQGDDILK----GGADDDVLFGEEGDDGIQGGNGEDTLNGGL 2244
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIY 319
+++ G GND +G ++ F GND+ DG +G D + +
Sbjct: 2245 GNDTLNGGEGNDTFMGGEGDDTVFGQDGNDIIDGGAGNDVLRGNFGDDTINGGAGDDFLA 2304
Query: 320 RFENAIIVYDANEHKQDF----------LSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ ++ + + + + D L +
Sbjct: 2305 GSGGSDLITGGAGNDTGYGGDGDDILQGGTGEDSFSGNDGNDVIEGGDSDDTLFGNNGAD 2364
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L+ G D +G D F + N + + +
Sbjct: 2365 TLLGGQGDDFMGGGGGNDILSGEDGNDTMFGGSNDDVLHGGEGNDRIEGQQQNDDLFGQN 2424
Query: 430 GVKEGRNPDAFKALEYIASHEDLINA---------FADAPDLVQVGKDHFSNFGCEEGRF 480
G R D L+ A ++ L G D F +
Sbjct: 2425 GNDILRGGDGSDLLDGGAGNDVLAGGNGGDILIGGLGADILRGNAGFDTFVFNNTADSTL 2484
Query: 481 VTFDS 485
D
Sbjct: 2485 TATDE 2489
Score = 77.1 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 60/443 (13%), Positives = 111/443 (25%), Gaps = 39/443 (8%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
N + DN + D S + + S Y +D + +
Sbjct: 1831 NAKISTFASDNSADGDMLAISWQQNGLSGTAYFAQSGSYIEAYEFADGLTLTSDA-FTST 1889
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK-- 258
+ + S + G+D LD G + + L ++ G E
Sbjct: 1890 GVSRTGASSDDTVGGSAGDDVLNGEAGNDTLD----GNTGDDLLLGAGGEDTLNGGEGRD 1945
Query: 259 -------NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---- 307
N + +++ G GND + G+ N++ F G+D + SG D
Sbjct: 1946 QIFGGIGNDLVNGGLGNDTLNGGEGNDTIFGDEGNDIIFGGDGDDTINSGSGNDNVDAGD 2005
Query: 308 ---FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ + + D + Q I
Sbjct: 2006 GADIVEGGLGNDLLNGGTGIDTLLGGAGNDTLDAEDGTDGVYLLQAQILRGGTGDDIYRI 2065
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD--SYLYLGSYDDLRNVFGSDRGAA 422
+A+ D++ + EF DIT L + +
Sbjct: 2066 SANAGDVVIDAAGEAEVGGTDRVEFYDLALSDITVSIWDSGNAVDGVMLTLSWNKGGQSG 2125
Query: 423 ARHYITHGVK---------EGRNPDAFKALEYIASHED----LINAFADAPDLVQVGKDH 469
++ G + + F + D LI + G D
Sbjct: 2126 TAYFAQLGSRVEVFEFAGGQVIPISEFIESGLVRLGTDGTDNLIGSAGADTLEGGSGDDL 2185
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
FG + G D G+D G++ G + L
Sbjct: 2186 LKGFGGADVLDGGNGYDQLSGGQGDDILKGGADDDVLFGEEGDDGIQGG---NGEDTLNG 2242
Query: 530 IASHEDLINAFADAPDLVQAGKD 552
++ L + + G D
Sbjct: 2243 GLGNDTLNGGEGNDTFMGGEGDD 2265
Score = 68.3 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 50/373 (13%), Positives = 94/373 (25%), Gaps = 43/373 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-------------G 255
+ + + + G D +D N IDL + S G
Sbjct: 1316 GDDRLIGNGGADRLDGGAGIDTVDYLSSWAGVN-IDLALGTGSGGDAEGDVLVSIEHAVG 1374
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF------------------ESSGNDV 297
+ IA ++ + G SG+D +IGN ++ SG D
Sbjct: 1375 SHYDDVIAGNSADNRLNGLSGSDTLIGNDGSDTLIGGDGDDDLRGGNGDDLLVGGSGADS 1434
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
FDG +G D Y + + + E + D ++VE ++
Sbjct: 1435 FDGGAGTDQALYNNAASSITLDLENAH---RNRGEAEGDVFTNVELFVASNHDDRLYGNA 1491
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF--------DSYLYLGSYD 409
+ L + L G D D F D +
Sbjct: 1492 AGNQLYGLEGDDVLEGRGGTDTLVGGSGNDTLRGGSEDDYLFGGKGADILDGGSGANDFA 1551
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
S + + G G + L A ++L G D
Sbjct: 1552 QYSAAISSIVASLRDASVNRGEATGDTFFGIEHLAGSAHDDELYGNNKTNVLNGGDGNDI 1611
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
++ + ++ ++V + G + + K+
Sbjct: 1612 LDGGAGQDHYTGGLGADTFVHDGGRNQDVIYDFNPSQGDRISFFGSSDVTSLTDLKSNHL 1671
Query: 530 IASHEDLINAFAD 542
+ +L
Sbjct: 1672 LQQGSNLFVVVGS 1684
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 47/362 (12%), Positives = 90/362 (24%), Gaps = 50/362 (13%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + ++ G G+D ++G + ++ + G D DG +G+DT Y + I
Sbjct: 1293 IDGNPGANTLAGDGGDDTLLGRAGDDRLIGNGGADRLDGGAGIDTVDYLSSWAGVNIDLA 1352
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + D L +E + + L + + LI G D
Sbjct: 1353 LGTGS---GGDAEGDVLVSIEHAVGSHYDDVIAGNSADNRLNGLSGSDTLIGNDGSDTLI 1409
Query: 382 ------------------SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA- 422
F G D + DL N + A
Sbjct: 1410 GGDGDDDLRGGNGDDLLVGGSGADSFDGGAGTDQALYNNAASSITLDLENAHRNRGEAEG 1469
Query: 423 ---------------ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
R Y + + LE + L+ +
Sbjct: 1470 DVFTNVELFVASNHDDRLYGNAAGNQLYGLEGDDVLEGRGGTDTLVGGSGNDTLRGGSED 1529
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT------HGVKEGRNP 521
D+ + + + Y + + A+ + G++
Sbjct: 1530 DYLFGGKGADILDGGSGANDF-AQYSAAISSIVASLRDASVNRGEATGDTFFGIEHLAGS 1588
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWN 581
L L + AG+DH+ G + + D+
Sbjct: 1589 AHDDELYGNNKTNVLNGGDGNDILDGGAGQDHY--TGGLGADTFVHDGG----RNQDVIY 1642
Query: 582 VF 583
F
Sbjct: 1643 DF 1644
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 65/506 (12%), Positives = 132/506 (26%), Gaps = 60/506 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ +G +Y + + + G G I H G
Sbjct: 1534 GGKGADILDGGSGANDFAQYSAAISSIVASLRDASVNRGEATGDTFFG-----IEHLAGS 1588
Query: 135 MHPGSY---------NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
H NGG +D D + + + D + Y P
Sbjct: 1589 AHDDELYGNNKTNVLNGGDGNDILDGGAGQDHYTGGLGADTFVHDGGRNQDVIYDFNPSQ 1648
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
D + + K + + + S + +Y+
Sbjct: 1649 GD----RISFFGSSDVTSLTDLKSNHLLQQGSNLFVVVGSK----AIFQINNANASYLTS 1700
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ +++++ G T + ++GS+ D+++G ++ +G+D+ +G +G+D
Sbjct: 1701 TSVTFTALAGLNFTDTFEGSDGADHLIGSAYGDILLGFDGTDILEGKAGDDILEGGAGVD 1760
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T + + D V+ + + L
Sbjct: 1761 T-----------LEGGAGNDTL--------DAGEGVDSVGLSQAQQLRGGTGDDIYLIGA 1801
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ + L+ G+D R D L + +D A
Sbjct: 1802 NAGDVLVDAAGEDQN----------GGNDRVEFTDVSLANAKISTFASDNSADGDMLAIS 1851
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE-GRFVTFD 484
+ +G+ ++ YI ++E + G + G D
Sbjct: 1852 WQQNGLS--GTAYFAQSGSYIEAYEFADGLTLTSDAFTSTGVSRTGASSDDTVGGSAGDD 1909
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN----PDAFKALEYIASHEDLINAF 540
D L G D A T EGR+ + ++ L
Sbjct: 1910 VLNGEAGNDTLDGNTGDDLLLGAGGEDTLNGGEGRDQIFGGIGNDLVNGGLGNDTLNGGE 1969
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ G D FG + +I
Sbjct: 1970 GNDTIFGDEGND--IIFGGDGDDTIN 1993
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/279 (12%), Positives = 69/279 (24%), Gaps = 15/279 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + + T + + D G I + G
Sbjct: 2233 GGNGEDTLNGGLGNDTLNGGEGNDTFMGGEGDDTVFGQDGNDIIDGGAGNDVLRGNFG-D 2291
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G + + + + + + +D V
Sbjct: 2292 DTINGGAGDDFLAGSGGSDLITGGAGNDTGYGGDGDDILQGGTGEDSFSGNDGNDVI--- 2348
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+G ++ D+ D G + L G N + + G
Sbjct: 2349 ---EGGDSDDTLFGN-NGADTLLGGQGDDFMGGGGGNDILSGEDGNDTMFGGSNDDVLHG 2404
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I + + G +GND++ G +++ +GNDV G G
Sbjct: 2405 GEGNDRIEGQQQNDDLFGQNGNDILRGGDGSDLLDGGAGNDVLAG--GNGGDILIGGLGA 2462
Query: 316 YKIYRFENAIIVYDANEHK-----QDFLSDVERLRFADQ 349
+ N D + +ER+ +
Sbjct: 2463 DILRGNAGFDTFVFNNTADSTLTATDEIDGIERIGLSRG 2501
Score = 39.8 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 60/513 (11%), Positives = 111/513 (21%), Gaps = 45/513 (8%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
FE I + G ++ + D DV G T+ N +
Sbjct: 1015 FENVQGSEHNDIIRGDAG-TNLLNGENGNDILEGRDGDDVLFGATGDDTLRGGNGDDILS 1073
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDS-------FLTSVMSYFMPQDSMMDASFGYCAT 182
G H G V + ++ + + +
Sbjct: 1074 ALQGREHFDGGAGQDLVSYKHGFLSTGVHVDLSQGRGFAGEAHDDTYTGVENVTGSRHND 1133
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
++ D A G + + ++ GG D + G
Sbjct: 1134 ILIGDGSANYIRDGGGHANDVLRGGGGVDWLITTGGFDRLWGDGGGDRFRIQREDGDGVA 1193
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG---NDVFD 299
G E ++ + I ++V + + DV
Sbjct: 1194 PGPRAVVVVDFDGSEGDLIDLRDLPISTLVLQRMGNDTYAD-----LGGGRALVIRDVNP 1248
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G+ F + + + N + + + + +
Sbjct: 1249 GALNASHFAFPDGASMQVGPVKTNVPAFLLEPDVETPYAAPARFIDGNPGANTLAGDGGD 1308
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEF--------------------GLSEGRDITF 399
L A + LI G D + G +EG +
Sbjct: 1309 DTLLGRAGDDRLIGNGGADRLDGGAGIDTVDYLSSWAGVNIDLALGTGSGGDAEGDVLVS 1368
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
+ YDD+ +D G D L +DL D
Sbjct: 1369 IEHAVGSHYDDVIAGNSADNRLN----GLSGSDTLIGNDGSDTLIGGDGDDDLRGGNGDD 1424
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
+ G D F + + ++ G G +
Sbjct: 1425 LLVGGSGADSFDGGAGTDQALYNNAASSITLDLENAHRNRGEAEGDVFTNVELFVASNHD 1484
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L A+ L D + G D
Sbjct: 1485 -----DRLYGNAAGNQLYGLEGDDVLEGRGGTD 1512
Score = 38.2 bits (87), Expect = 4.0, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 63/220 (28%), Gaps = 22/220 (10%)
Query: 194 IYGAPKGSLGN---------------NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
+ G ++ + N I GGDD++ +GG
Sbjct: 860 LGGLETDTVSDLFENVRVGTHQGDTINGGGGGDAIFGDGGSDIINGMGGDDII----VGG 915
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ I G + I + + G +G+D +IG + ++ +G D+
Sbjct: 916 TGSDTLDGGVGDDVIDGGDGVDMITGGEGNDDLDGDAGDDTLIGGAGDDDLGGGAGADIL 975
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G G D Y + + I D S E ++ ++
Sbjct: 976 HGGEGKDRLAYGSSNAGVTIDLAAGTGS---GGHADGDVFSGFENVQGSEHNDIIRGDAG 1032
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++L + L G DV G DI
Sbjct: 1033 TNLLNGENGNDILEGRDGDDVLFGATGDDTLRGGNGDDIL 1072
>gi|240141408|ref|YP_002965888.1| hypothetical protein MexAM1_META1p5007 [Methylobacterium extorquens
AM1]
gi|240011385|gb|ACS42611.1| hypothetical protein MexAM1_META1p5007 [Methylobacterium extorquens
AM1]
Length = 817
Score = 84.5 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 54/281 (19%), Positives = 88/281 (31%), Gaps = 33/281 (11%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALG-LMHPGS--------YNGGYPVYGVDNDY 153
F G HEIGH LG L P + +NG +
Sbjct: 105 WFYDPTGVAAAPGNRFDAFTIFQHEIGHGLGFLEFPATVGANGLLLFNGENTRTVLGGPV 164
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
D V + +G + D+ +Q + ++
Sbjct: 165 VLDGARAHV--WGSEDLMDPYLGWGQRSYISDLDLAMLQDKGMPISTERADKMWLGNR-- 220
Query: 214 KDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T + GGDD +D L GGV N + + ++ G N T+
Sbjct: 221 -----ADTFFAYGGDDWIDGGWGDDKLFGGVGNDTLIGGDGNDALDGGVGNDTLIGGDGN 275
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT---------FFYYAPSYLY-KI 318
+++ G GND +IG N+ +G+D G +G DT S Y +
Sbjct: 276 DALDGGVGNDTLIGGDGNDALDGGAGDDTLIGGNGGDTLEGGEGIDRAVLTGRSQDYVAL 335
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
Y ++ + D L+ +E L F D + +
Sbjct: 336 YGATGSLAIKHLGSGSIDTLTSIETLNFDDTVLGMPGLLAH 376
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/173 (11%), Positives = 38/173 (21%), Gaps = 23/173 (13%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + + D ++ G+D G G DT + +
Sbjct: 213 DKMWLGNRADTFFAYGGDDWIDGGWGDDKLFGGVGNDTLI--GGDGNDALDGGVGNDTLI 270
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D L + L G D
Sbjct: 271 GG-----------------DGNDALDGGVGNDTLIGGDGNDALDGGAGDDTLIGGNGGDT 313
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
EG D + G D ++G+ A +H + + + +
Sbjct: 314 LEGGEG----IDRAVLTGRSQDYVALYGATGSLAIKHLGSGSIDTLTSIETLN 362
>gi|307316899|ref|ZP_07596341.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
gi|306897521|gb|EFN28265.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
Length = 1072
Score = 84.1 bits (206), Expect = 6e-14, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 82/277 (29%), Gaps = 12/277 (4%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + + I G D +D + + + + T++
Sbjct: 25 FGGDDFIQGLGGADVINGGAGVDTVDYSEKTTSVVVTLTGATAATVFVNGVADDTLSN-- 82
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+E+V G SGND + G++ NN+F GNDV DG +G DT Y + +
Sbjct: 83 -VENVYGGSGNDTITGDAQNNLFRGGGGNDVLDGGAGNDTADYADKTTSVVVTLMGATPA 141
Query: 327 VYDANEHKQDFLSDVE---------RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
N +D +S+ E L D+ IL A + L G
Sbjct: 142 TVFVNGIAEDTISNFENVYGGSGNDILTGDDRSNILRGEAGNDILNGGADDDLLSGGAGN 201
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D + F L E + D + + + +
Sbjct: 202 DTADGGTGIDTFDLREKTSSVVVQLSGANAATVFVGGVAEDTIRNVENIVGGTADDTLSG 261
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
DA A D + A L +++
Sbjct: 262 DAAANKLSGARGNDWLKGGGGADTLDGGEDSDTADYS 298
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/448 (12%), Positives = 113/448 (25%), Gaps = 42/448 (9%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-- 262
+ ++ G D +D + G TI
Sbjct: 634 TGDGNSNTIRGGAGADSLDGGAGVDTVDYRDKTKSVAVTLDGATPVTVKVGGVIEDTIRN 693
Query: 263 ----AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + + G +V++GN + G DV DG +G+DT Y + +
Sbjct: 694 FENISGGSAGDMLTGDGLANVLVGNDGADTLRGGLGKDVLDGGNGVDTADYLEKTDAISV 753
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A +D + VE + ++ L + +G D
Sbjct: 754 TLNGTASAAVLVGGTAEDTIRGVE---------NILSGSGADTLVGDTASNMFRGALGAD 804
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ Y + A+ ++ G
Sbjct: 805 FIDGGAGVDT-----------------ADYREKTGSVEVALSGASDSFVFVGGVVEDTIR 847
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ + ++ L GKD + G + + SY D
Sbjct: 848 NIENVFGGKGNDTLTGDGLANTLNGNDGKDLLTGGGGADILDGG--AASDTASYRDKTAS 905
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
A +T G + + ++ L G D FG
Sbjct: 906 VSVTLDGATYTTVTVGGAAEDTIRNVENIWGGTGNDSLSGDANANLLSGGGGSD--ILFG 963
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
F+ L ++ D F + + + G ++ QF + +
Sbjct: 964 GAGADIFQFDFALG-STNVDTVLDFTAGDRLFLSKSVFTTLSGG---TLAATQFYAAAD- 1018
Query: 619 SEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ A+ + +D LY D G
Sbjct: 1019 -ATAAQNANQKIIYDTTSGALYYDADGS 1045
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 72/255 (28%), Gaps = 3/255 (1%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
K I G D D + + + G T+
Sbjct: 564 SGSDILKGDGGQDVIDGGAGTDTADFSEKTAAVVLALAGAANAIATVGGLAEDTVRN--- 620
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IES+ G G DV+ G+ +N +G D DG +G+DT Y + + +
Sbjct: 621 IESIFGGIGADVLTGDGNSNTIRGGAGADSLDGGAGVDTVDYRDKTKSVAVTLDGATPVT 680
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+D + + E + ++L + L +G+DV +
Sbjct: 681 VKVGGVIEDTIRNFENISGGSAGDMLTGDGLANVLVGNDGADTLRGGLGKDVLDGGNGVD 740
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
E D + S L D + ++ + D + A
Sbjct: 741 TADYLEKTDAISVTLNGTASAAVLVGGTAEDTIRGVENILSGSGADTLVGDTASNMFRGA 800
Query: 448 SHEDLINAFADAPDL 462
D I+ A
Sbjct: 801 LGADFIDGGAGVDTA 815
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/369 (13%), Positives = 92/369 (24%), Gaps = 37/369 (10%)
Query: 202 LGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE---------- 248
GN+ + Q + G+D D +
Sbjct: 90 SGNDTITGDAQNNLFRGGGGNDVLDGGAGNDTADYADKTTSVVVTLMGATPATVFVNGIA 149
Query: 249 -----SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ ++ G N + + G +GND++ G + +++ +GND DG +G
Sbjct: 150 EDTISNFENVYGGSGNDILTGDDRSNILRGEAGNDILNGGADDDLLSGGAGNDTADGGTG 209
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+DTF + + +D + +VE + V L
Sbjct: 210 IDTFDLREKTSSVVVQLSGANAATVFVGGVAEDTIRNVE---------NIVGGTADDTLS 260
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
A+ L G D + E D Y D
Sbjct: 261 GDAAANKLSGARGNDWLKGGGGADTLDGGEDSDT--------ADYSDKAAAIAVALNGGN 312
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+T G + + + + +I A +G D G + +
Sbjct: 313 PVTVTVGGIAEDLIAKIENIVGGSGGDTIIGDAAANAFRGGLGADVLDGGGGSDTADFSD 372
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
+ + + + + G A G A+
Sbjct: 373 KVQSVVLALNGAVDAIAAVGGTAEDTVRNIENITG--GSGNDQFTGDAAANTFRGGLGAD 430
Query: 544 PDLVQAGKD 552
G D
Sbjct: 431 VLDGGDGSD 439
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 72/291 (24%), Gaps = 10/291 (3%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I ++G+ +DV+ G ++ G DV +G +G+DT Y + +
Sbjct: 4 INGTAGNNVLIGTDLDDVISGFGGDDFIQGLGGADVINGGAGVDTVDYSEKTTSVVVTLT 63
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N D LS+VE + Q ++ + L G D +
Sbjct: 64 GATAATVFVNGVADDTLSNVENVYGGSGNDTITGDAQNNLFRGGGGNDVLDGGAGNDTAD 123
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ + + + Y G D
Sbjct: 124 YADKT--------TSVVVTLMGATPATVFVNGIAEDTISNFENVYGGSGNDILTGDDRSN 175
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
L A ++ L D G D + + + +
Sbjct: 176 ILRGEAGNDILNGGADDDLLSGGAGNDTADGGTGIDTFDLREKTSSVVVQLSGANAATVF 235
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G A G D L A+ L A + G D
Sbjct: 236 VGGVAEDTIRNVENIVGGTAD--DTLSGDAAANKLSGARGNDWLKGGGGAD 284
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/248 (16%), Positives = 70/248 (28%), Gaps = 12/248 (4%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ GG D D + + G T+ IE++ G
Sbjct: 352 GGLGADVLDGGGGSDTADFSDKVQSVVLALNGAVDAIAAVGGTAEDTVRN---IENITGG 408
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SGND G++A N F G DV DG G DT Y + + +
Sbjct: 409 SGNDQFTGDAAANTFRGGLGADVLDGGDGSDTADYGDKTVSVVVTLAGANPTTAFVDGMA 468
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+D L ++E + + +L L G D+ + +
Sbjct: 469 EDSLRNIE---------NIIGGSGNDVLAGDGFQNVLDGGAGTDMADYSASAKGIAVMLN 519
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
+ + D LRN+ A A + + +D+I+
Sbjct: 520 GANDAKVIVGSAAEDTLRNIENVTGSAFADVITGDAQANILLGGSGSDILKGDGGQDVID 579
Query: 455 AFADAPDL 462
A
Sbjct: 580 GGAGTDTA 587
>gi|119486638|ref|ZP_01620688.1| hypothetical protein L8106_12845 [Lyngbya sp. PCC 8106]
gi|119456255|gb|EAW37387.1| hypothetical protein L8106_12845 [Lyngbya sp. PCC 8106]
Length = 1609
Score = 84.1 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 83/313 (26%), Gaps = 40/313 (12%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYG--APKGSLGNNIYKIE-------VQQKDSPFIQTI 222
D FG + ++ ++G +G + I + +
Sbjct: 1266 GNDTVFGSDSDQLIFGDQGNDSLFGELGNDTIIGTDGSGISVGDVIEQDIIYGNEGNDLL 1325
Query: 223 YDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES------- 270
G+D + D GG I L ++ G + + ++ TV E
Sbjct: 1326 QGGPGNDTIFSGEQDDFTYGGQDRDIILGDLGNDTLYGDQGDDSMLGDTVDEDEIEPQRG 1385
Query: 271 -------VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ G +G+D + G N+ GND G D + +Y
Sbjct: 1386 VNGVIDLMWGGAGDDSMNGGRGNDTLSGGVGNDDVRGGKEDDLVY--GEVGSDLLYGDLG 1443
Query: 324 AIIVYDANEHKQDFL----SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
V + D L +D E +L + L D
Sbjct: 1444 NDEVC--GDEGNDTLFGDINDNETFSDTPGEDTLCGGSGNDLLYGNQDQDRLCGGTDNDT 1501
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+G D D L G DR T + + +
Sbjct: 1502 LYGGLGEDTLYGEQGDDWLVGDEA----EDLLFGGSGRDRFVLFSGEGTDTIGDFQLGTD 1557
Query: 440 FKALEYIASHEDL 452
F AL + EDL
Sbjct: 1558 FIALGGGLTFEDL 1570
Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 48/355 (13%), Positives = 83/355 (23%), Gaps = 33/355 (9%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
D GG D L G IDL + + + I E G+ +D +
Sbjct: 1198 PVDDGGCDCPTLPEFGA----IDLPDRPDAVPNPSDIDQPIIGSDADEIFRGTVVDDTLF 1253
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
S N V GND GS D + ++ + + +
Sbjct: 1254 PVSENAVIVGFEGNDTVFGSD-SDQLIF-GDQGNDSLFGELGNDTIIGTDGSGISVGDVI 1311
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E+ + +L+ + + D + G D +
Sbjct: 1312 EQ-------DIIYGNEGNDLLQGGPGNDTIFSGEQDDFTYGGQDRDIILGDLGNDTLYGD 1364
Query: 402 YLYLGSYDDLRNVFGSDRGAAARH-----YITHGVKEGRNPDAFKALEYIASHEDLINAF 456
D + + + G L ++D+
Sbjct: 1365 QGDDSMLGDTVDEDEIEPQRGVNGVIDLMWGGAGDDSMNGGRGNDTLSGGVGNDDVRGGK 1424
Query: 457 ADAPDLVQVGKD------HFSNFGCEEGRFVTF----DSYLYLGSYDDLRNVFGSDRGAA 506
D +VG D +EG F D+ + + + GS
Sbjct: 1425 EDDLVYGEVGSDLLYGDLGNDEVCGDEGNDTLFGDINDNETFSDTPGEDTLCGGSGNDLL 1484
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
Y L + L D + +D FG
Sbjct: 1485 ---YGNQDQDRLCGGTDNDTLYGGLGEDTLYGEQGDDWLVGDEAED--LLFGGSG 1534
>gi|329850883|ref|ZP_08265728.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328841198|gb|EGF90769.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1095
Score = 84.1 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 60/388 (15%), Positives = 101/388 (26%), Gaps = 63/388 (16%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEV-QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
A +YG + IY E + TI D+ G D L+ +DL
Sbjct: 535 ATLTVYGDAPTNDSEYIYTNEFGVLAGMDYGFTIIDTAGIDTLNA-AAVTAAAVLDLRGI 593
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF- 307
+ + I G +TIA T+IE G G DV GN A N G+D G +G DT
Sbjct: 594 APAVINGMA--VTIAPGTLIEHAWGGDGGDVFHGNGAANRLNGMRGSDTIHGGAGDDTLS 651
Query: 308 ------FYYAPSYLYKIYRFEN-----------------AIIVYDANEHKQDFLSDVERL 344
+ + + ++ + ++ D L E L
Sbjct: 652 GGAGDDYVHGGAGNDELSGGDGIDRLSYEGATTGVTVDLSLTTGQETGAGLDKLFGFEVL 711
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
+ + +++ ++ + G D G D +
Sbjct: 712 QGSGHDDRLTGSAASNVISAGGGHDTVEGGDGNDTLVGGAGGDRLNGGAGVDRLSYADSV 771
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
G L + + + V +G ED+ +
Sbjct: 772 AGVRVLLTANVVTGLPLSLGGHAQGDVIDG--------------FEDVTGGSGNDTLGGD 817
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
G + + G + G D G
Sbjct: 818 NGDNRLTGGGGHDALLGEAGDDDLDGGAGDDALSGGV---------------------GN 856
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKD 552
L +++L A G D
Sbjct: 857 DQLYGRDGNDNLAGAEGHDTVDGGGGHD 884
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/331 (13%), Positives = 84/331 (25%), Gaps = 11/331 (3%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ +S +G + + ++ G G + L GH
Sbjct: 659 VHGGAGNDELSGGDGIDRLSYEGATTGVTVDLSLTTGQETGAGLDKLFGFEVLQGSGHDD 718
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
L + N G D D T V + + V+ + +
Sbjct: 719 RLTGSAASNVISAGGGHDTVEGGDGNDTLVGGAGGDRLNGGAGVDRLSYADSVAGVRVLL 778
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNT 247
A + Q + + G+D L D L GG + L
Sbjct: 779 T---ANVVTGLPLSLGGHAQGDVIDGFEDVTGGSGNDTLGGDNGDNRLTGGGGHDALLGE 835
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G + ++ + + G GND + G ++ G+DV G G D
Sbjct: 836 AGDDDLDGGAGDDALSGGVGNDQLYGRDGNDNLAGAEGHDTVDGGGGHDVVSGGDGDDRV 895
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + F + D + R L+ +
Sbjct: 896 --SGGDGHDMVGGRAGNDYLDGGLGNDTVFGGDGDDGAYGRDGDDNLSGELGRDTLDGGS 953
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ L D + G D+
Sbjct: 954 GNDTLSGGGDDDRLSGGLGSDQIRGGSGNDV 984
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/354 (9%), Positives = 74/354 (20%), Gaps = 54/354 (15%)
Query: 202 LGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-YIDLNTE--------- 248
G++ + + G D L + L T
Sbjct: 645 AGDDTLSGGAGDDYVHGGAGNDELSGGDGIDRLSYEGATTGVTVDLSLTTGQETGAGLDK 704
Query: 249 --SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + G + + + G+D V G N+ +G D +G +G+D
Sbjct: 705 LFGFEVLQGSGHDDRLTGSAASNVISAGGGHDTVEGGDGNDTLVGGAGGDRLNGGAGVDR 764
Query: 307 FFYYAPSYLYKIYRFENAII---VYDANEHKQDFLSDVERLRFADQCIDSVN-------- 355
Y ++ N + + + D + E +
Sbjct: 765 LSYADSVAGVRVLLTANVVTGLPLSLGGHAQGDVIDGFEDVTGGSGNDTLGGDNGDNRLT 824
Query: 356 ----------------------------VKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
L ++L G D +
Sbjct: 825 GGGGHDALLGEAGDDDLDGGAGDDALSGGVGNDQLYGRDGNDNLAGAEGHDTVDGGGGHD 884
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
+G D + N + + G D L
Sbjct: 885 VVSGGDGDDRVSGGDGHDMVGGRAGNDYLDGGLGNDTVFGGDGDDGAYGRDGDDNLSGEL 944
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
+ L + D S + + +++ D+ +
Sbjct: 945 GRDTLDGGSGNDTLSGGGDDDRLSGGLGSDQIRGGSGNDVFVYRQADVMATGDA 998
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/290 (15%), Positives = 82/290 (28%), Gaps = 33/290 (11%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ + IS+ G+ T + D G G + +++ +
Sbjct: 719 RLTGSAASNVISAGGGH-DTVEGGDGNDTLVGGAGGDRLNGGAGVDRLSYADSVAGVRVL 777
Query: 132 L------GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
L GL + V D S ++
Sbjct: 778 LTANVVTGLPLSLGGHAQGDVIDGFEDVTGGSGNDTLGGDNGDNRLTGGGGHDALLGEAG 837
Query: 186 SDIVAVQKIYGAPKGSLGNN-IYK--IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIG 237
D + A G +GN+ +Y + T+ GG D++ D + G
Sbjct: 838 DDDLDGGAGDDALSGGVGNDQLYGRDGNDNLAGAEGHDTVDGGGGHDVVSGGDGDDRVSG 897
Query: 238 GVKNYIDLNTESWSSIGGYEKNMT------------------IAQHTVIESVVGSSGNDV 279
G + + + G N T ++ +++ G SGND
Sbjct: 898 GDGHDMVGGRAGNDYLDGGLGNDTVFGGDGDDGAYGRDGDDNLSGELGRDTLDGGSGNDT 957
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G ++ G+D G SG D F Y + A ++ D
Sbjct: 958 LSGGGDDDRLSGGLGSDQIRGGSGNDVFVYRQADVMATGDAHAAADMLLD 1007
>gi|254503057|ref|ZP_05115208.1| Cadherin domain protein [Labrenzia alexandrii DFL-11]
gi|222439128|gb|EEE45807.1| Cadherin domain protein [Labrenzia alexandrii DFL-11]
Length = 703
Score = 84.1 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 75/188 (39%), Gaps = 27/188 (14%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
+F + Y++ + D+ A L + + HF+ FG EGR FD+ YL D
Sbjct: 6 TSSFDSDFYLSQNPDVAAAIEAG--LFESAEQHFNQFGFSEGRDPNPYFDTSFYLEQNPD 63
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ + H+ G EGR+P+A F Y+ + D+ + + H
Sbjct: 64 VAAAGIN----PLNHFNQFGETEGRSPNAIFNPTYYLEQNPDVAAS-------GISPFLH 112
Query: 554 FSNFGYEEGRSIT----------FNPDLYLTSYDDLWNVFGSD-RSAAAQHYITHGMKEG 602
F N G EGRS F+ YL + D+ + + S+ +H++ G E
Sbjct: 113 FINHGASEGRSPNASVASQTSEGFDEAAYLAANPDIADAIANGTFSSGYEHWLLFGFDES 172
Query: 603 RALGISGM 610
R+ +
Sbjct: 173 RSGAQNTS 180
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 66/186 (35%), Gaps = 25/186 (13%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDD 410
S+ S + + + + + +HF +FG SEGRD FD+ YL D
Sbjct: 4 SITSSFDSDFYLSQNPDVAAAIEAGLFESAEQHFNQFGFSEGRDPNPYFDTSFYLEQNPD 63
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ H+ G EGR+P+ F Y+ + D+ + H
Sbjct: 64 VAAA----GINPLNHFNQFGETEGRSPNAIFNPTYYLEQNPDVAASGISPFL-------H 112
Query: 470 FSNFGCEEGRFV----------TFDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEG 518
F N G EGR FD YL + D+ + + + H++ G E
Sbjct: 113 FINHGASEGRSPNASVASQTSEGFDEAAYLAANPDIADAIANGTFSSGYEHWLLFGFDES 172
Query: 519 RNPDAF 524
R+
Sbjct: 173 RSGAQN 178
>gi|288939990|ref|YP_003442230.1| Hemolysin-type calcium-binding region [Allochromatium vinosum DSM
180]
gi|288895362|gb|ADC61198.1| Hemolysin-type calcium-binding region [Allochromatium vinosum DSM
180]
Length = 2291
Score = 84.1 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 82/595 (13%), Positives = 147/595 (24%), Gaps = 62/595 (10%)
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISSNN-----GYVCTPRYDSRYFMEINFDKADVWRY 112
AL + F + A W+
Sbjct: 1726 ALVGVGATTTINFIGVNDAPTGSVTLDGTPAELQTLTANTSALGDLDGLTGASYAYQWQV 1785
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
GT S ++ A G H G V Y +D+ T+ ++ +
Sbjct: 1786 SANGGTSWS-----DLSGATGASHALDDTLGGRQVRVQVSYTDDAGFTNTVASAGQAITN 1840
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
+ SF P D A + + +Y GDD
Sbjct: 1841 VRDSFRLTEGPDTYDGRA-------NPIAQVIEALGGNDTVQGGAGDDRLYGQDGDD--- 1890
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+L G + + + G T+ + + G GND G N+VF +
Sbjct: 1891 -SLNGQYGDDVLDGGAGNDRLTGGPGTDTVLGGDGDDWLGGGFGNDRQEGGDGNDVFAGN 1949
Query: 293 -SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
SG+DV DG +G D Y S ++ ++ + + D L +E+L +
Sbjct: 1950 PSGDDVLDGGAGEDRADYSESSDAVRVDLRQSGPQ-WISTASGTDTLISIEQLTGSAYAD 2008
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ L + L G D + G D
Sbjct: 2009 TLTGNTAANRLAGGEGDDTLSGQEGDDWLDGGAGNDRLTGGPGTDTVLGGDGDDWLGGGF 2068
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
N + + A + + D + + +
Sbjct: 2069 GNDRQEGGAGNDVFAGNPSGDDVLDGGAGEDRADYSESSDAVRVDLRQSGPQWISTYSGT 2128
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
+ + L + G + G+ D + L+ A
Sbjct: 2129 DTLISIEQLTGSAYADTLTGNTAANRLAGGEGDDILS---------GQEGDDW--LDGGA 2177
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA 591
++ L G D + F+ S D+ F
Sbjct: 2178 GNDWLGGGSGTDILTGGTGVD-----------TFVFDTVP-TISNIDVITDFNHAED--- 2222
Query: 592 QHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ +S F + E R + +L +++ LY D G
Sbjct: 2223 ------------VIALSSAVFTAFTG-HEGERVGQNANLFYNNFSGTLYYDADGS 2264
>gi|16263827|ref|NP_436619.1| putative hemolysin-adenlyate cyclase protein [Sinorhizobium
meliloti 1021]
gi|15139951|emb|CAC48479.1| probable type I secretion target repeat protein [Sinorhizobium
meliloti 1021]
Length = 1072
Score = 84.1 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 82/277 (29%), Gaps = 12/277 (4%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + + I G D +D + + + + T++
Sbjct: 25 FGGDDFIQGLGGADVINGGAGVDTVDYSEKTTSVVVTLTGANAATVFVNGVADDTLSN-- 82
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+E+V G SGND + G++ NN+F GNDV DG +G DT Y + +
Sbjct: 83 -VENVYGGSGNDTITGDAQNNLFRGGGGNDVLDGGAGNDTADYADKTTSVVVTLMGATPA 141
Query: 327 VYDANEHKQDFLSDVE---------RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
N +D +S+ E L D+ IL A + L G
Sbjct: 142 TVFVNGIAEDTISNFENVYGGSGNDILTGDDRSNILRGEAGNDILNGGADDDLLSGGAGN 201
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D + F L E + D + + + +
Sbjct: 202 DTADGGTGIDTFDLREKTSSVVVQLSGANAATVFVGGVAEDTIRNVENIVGGTADDTLSG 261
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
DA A D + A L +++
Sbjct: 262 DAAANKLSGARGNDWLKGGGGADTLDGGEDSDTADYS 298
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 58/448 (12%), Positives = 112/448 (25%), Gaps = 42/448 (9%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-- 262
+ ++ G D +D + G TI
Sbjct: 634 TGDGNSNTIRGGAGADSLDGGAGVDTVDYRDKTKSVAVTLDGATPVTVKVGGVIEDTIRN 693
Query: 263 ----AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + + G +V++GN + G DV DG +G+DT Y + +
Sbjct: 694 FENISGGSAGDMLTGDGLANVLVGNDGADTLRGGLGKDVLDGGNGVDTADYLEKTDAISV 753
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A +D + VE + ++ L + +G D
Sbjct: 754 TLNGTASAAVLVGGTAEDTIRGVE---------NILSGSGADTLVGDTASNMFRGALGAD 804
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ Y + A+ ++ G
Sbjct: 805 FIDGGAGVDT-----------------ADYREKTGSVEVALSGASDSFVFVGGVVEDTIR 847
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ + ++ L GKD + G + + SY D
Sbjct: 848 NIENVFGGKGNDTLTGDGLANTLNGNDGKDLLTGGGGADILDGG--AASDTASYRDKTAS 905
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
A +T G + + ++ L G D FG
Sbjct: 906 VSVTLDGATYTTVTVGGAAEDTIRNVENIWGGTGNDSLSGDANANLLSGGGGSD--ILFG 963
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
F+ L ++ D F + I + G ++ QF + +
Sbjct: 964 GAGADIFQFDFALG-STNVDTVLDFTAGDRLFLSKSIFTSLSGG---TLAATQFYAAAD- 1018
Query: 619 SEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ + + +D LY D G
Sbjct: 1019 -ATAAQNVNQKIIYDTTSGALYYDADGS 1045
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 72/255 (28%), Gaps = 3/255 (1%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
K I G D D + + + G T+
Sbjct: 564 SGSDILKGDGGQDVIDGGAGTDTADFSEKTAAVVLALAGAANAIATVGGLAEDTVRN--- 620
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IES+ G G DV+ G+ +N +G D DG +G+DT Y + + +
Sbjct: 621 IESIFGGIGADVLTGDGNSNTIRGGAGADSLDGGAGVDTVDYRDKTKSVAVTLDGATPVT 680
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+D + + E + ++L + L +G+DV +
Sbjct: 681 VKVGGVIEDTIRNFENISGGSAGDMLTGDGLANVLVGNDGADTLRGGLGKDVLDGGNGVD 740
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
E D + S L D + ++ + D + A
Sbjct: 741 TADYLEKTDAISVTLNGTASAAVLVGGTAEDTIRGVENILSGSGADTLVGDTASNMFRGA 800
Query: 448 SHEDLINAFADAPDL 462
D I+ A
Sbjct: 801 LGADFIDGGAGVDTA 815
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/369 (13%), Positives = 92/369 (24%), Gaps = 37/369 (10%)
Query: 202 LGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE---------- 248
GN+ + Q + G+D D +
Sbjct: 90 SGNDTITGDAQNNLFRGGGGNDVLDGGAGNDTADYADKTTSVVVTLMGATPATVFVNGIA 149
Query: 249 -----SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ ++ G N + + G +GND++ G + +++ +GND DG +G
Sbjct: 150 EDTISNFENVYGGSGNDILTGDDRSNILRGEAGNDILNGGADDDLLSGGAGNDTADGGTG 209
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+DTF + + +D + +VE + V L
Sbjct: 210 IDTFDLREKTSSVVVQLSGANAATVFVGGVAEDTIRNVE---------NIVGGTADDTLS 260
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
A+ L G D + E D Y D
Sbjct: 261 GDAAANKLSGARGNDWLKGGGGADTLDGGEDSDT--------ADYSDKAAAIAVALNGGN 312
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+T G + + + + +I A +G D G + +
Sbjct: 313 PVTVTVGGIAEDLIAKIENIVGGSGGDTIIGDAAANAFRGGLGADVLDGGGGSDTADFSD 372
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
+ + + + + G A G A+
Sbjct: 373 KVQSVVLALNGAVDAIAAVGGTAEDTVRNIENITG--GSGNDQFTGDAAANTFRGGLGAD 430
Query: 544 PDLVQAGKD 552
G D
Sbjct: 431 VLDGGDGSD 439
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 72/291 (24%), Gaps = 10/291 (3%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I ++G+ +DV+ G ++ G DV +G +G+DT Y + +
Sbjct: 4 INGTAGNNVLIGTDLDDVISGFGGDDFIQGLGGADVINGGAGVDTVDYSEKTTSVVVTLT 63
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N D LS+VE + Q ++ + L G D +
Sbjct: 64 GANAATVFVNGVADDTLSNVENVYGGSGNDTITGDAQNNLFRGGGGNDVLDGGAGNDTAD 123
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ + + + Y G D
Sbjct: 124 YADKT--------TSVVVTLMGATPATVFVNGIAEDTISNFENVYGGSGNDILTGDDRSN 175
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
L A ++ L D G D + + + +
Sbjct: 176 ILRGEAGNDILNGGADDDLLSGGAGNDTADGGTGIDTFDLREKTSSVVVQLSGANAATVF 235
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G A G D L A+ L A + G D
Sbjct: 236 VGGVAEDTIRNVENIVGGTAD--DTLSGDAAANKLSGARGNDWLKGGGGAD 284
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/248 (16%), Positives = 70/248 (28%), Gaps = 12/248 (4%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ GG D D + + G T+ IE++ G
Sbjct: 352 GGLGADVLDGGGGSDTADFSDKVQSVVLALNGAVDAIAAVGGTAEDTVRN---IENITGG 408
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SGND G++A N F G DV DG G DT Y + + +
Sbjct: 409 SGNDQFTGDAAANTFRGGLGADVLDGGDGSDTADYGDKTVSVVVTLAGANPTTAFVDGMA 468
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+D L ++E + + +L L G D+ + +
Sbjct: 469 EDSLRNIE---------NIIGGSGNDVLAGDGFQNVLDGGAGTDMADYSASAKGIAVMLN 519
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
+ + D LRN+ A A + + +D+I+
Sbjct: 520 GANDAKVIVGSAAEDTLRNIENVTGSAFADVITGDAQANILLGGSGSDILKGDGGQDVID 579
Query: 455 AFADAPDL 462
A
Sbjct: 580 GGAGTDTA 587
>gi|325133898|gb|EGC56554.1| Iron-regulated protein frpC [Neisseria meningitidis M13399]
Length = 1102
Score = 84.1 bits (206), Expect = 8e-14, Method: Composition-based stats.
Identities = 46/260 (17%), Positives = 87/260 (33%), Gaps = 15/260 (5%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 738 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 797
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYEN-----DSFLTSVMSYFMPQDSMMDASFGYCATPM- 184
+ + + ++ DS +V SYF S
Sbjct: 798 KDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 857
Query: 185 VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
V D+ V+++ + + G++ Y+ +Y + GDDLL+ G N
Sbjct: 858 VLDVATVKEL--VQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGN 911
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ ++ G E N + + + + G GND + G N+ +GND +G
Sbjct: 912 DSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGG 971
Query: 302 SGLDTFFYYAPSYLYKIYRF 321
SG DT+ + +Y +
Sbjct: 972 SGSDTYVFGKGFGQDTVYNY 991
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/288 (15%), Positives = 80/288 (27%), Gaps = 60/288 (20%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 743 GHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 802
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV- 354
+ V ++ ++ + F + + V
Sbjct: 803 FTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 862
Query: 355 --------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L S L +G D G D +Y G
Sbjct: 863 TVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLNGDAGND-----SIYSG 917
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ +D N + Y +G + L ++ LI + G
Sbjct: 918 NGNDTLNGGEGNDAL----YGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 973
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
D + FG G+ ++ ++ D AA H+I G
Sbjct: 974 SDTYV-FGKGFGQDTVYN--YHVDKNSDTM--HFKGFKAADVHFIRSG 1016
>gi|251825698|gb|ACT20899.1| protease [Pseudomonas aeruginosa]
Length = 126
Score = 84.1 bits (206), Expect = 8e-14, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 41/120 (34%), Gaps = 10/120 (8%)
Query: 56 RWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINF--DK 106
+ +L WS V + F + + N + P + + +
Sbjct: 7 KLSLQSWSDVAKINFVDAGQGEQGDLVFGNFSSSVGGAAFAFLPDVQDALKGQSWYLINS 66
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY 165
+ G HEIGH LGL HPG YN G D Y D+ SVMSY
Sbjct: 67 SYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAEDTRAYSVMSY 126
>gi|329849795|ref|ZP_08264641.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328841706|gb|EGF91276.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1545
Score = 83.7 bits (205), Expect = 8e-14, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 79/297 (26%), Gaps = 13/297 (4%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++ G GND + G N+V +G+D G +G DTF+ + V+
Sbjct: 24 DTETGGPGNDSLAGLDGNDVLDGGAGSDTMVGGNGNDTFYVDSTGDNVVENSTGGIDTVF 83
Query: 329 DANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + +E L I++ + L + L + G D +
Sbjct: 84 SSVSYNL-SGRYIEFLNLTGAAHINATGNSFANTLTGNSGNNILNGLAGNDSLDGGAGID 142
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN--PDAFKALEY 445
G D + G G+D ++ +YI E +
Sbjct: 143 TLIGGAGDDTF--TVDNAGDTVTELTGEGTDTVRSSLNYILSANLEHLILLGASNANGTG 200
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEG----RFVTFDSYLYLGSYDDLRNVFGS 501
+ L +G D + + FD+ + +Y +
Sbjct: 201 NDGNNALTGNDGTNVLTGGLGNDTYYVQNTGDSVVEAANAGFDTIVSSVTYSLAGKQVEN 260
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIA---SHEDLINAFADAPDLVQAGKDHFS 555
G + + H+ L + G D +
Sbjct: 261 LTLTGGTALNATGNGFANVLVGNSGVNMLDGGGGHDRLDGSIGADIMTGGTGNDTYV 317
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/408 (13%), Positives = 102/408 (25%), Gaps = 37/408 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ---- 264
T+ G+D + G + + N++
Sbjct: 40 GNDVLDGGAGSDTMVGGNGNDTFYVDSTGDNVVE-NSTGGIDTVFSSVSYNLSGRYIEFL 98
Query: 265 ---HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ G+S + + GNS NN+ +GND DG +G+DT +
Sbjct: 99 NLTGAAHINATGNSFANTLTGNSGNNILNGLAGNDSLDGGAGIDTLI--GGAGDDTFTVD 156
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
V + D + + ++ AS + G +
Sbjct: 157 NAGDTVTELTGEGTDTVRSSLNYILS--------ANLEHLILLGASNANGTGNDGNNALT 208
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
G D + S + N ++ + + E
Sbjct: 209 GNDGTNVLTGGLGNDTYY-VQNTGDSVVEAANAGFDTIVSSVTYSLAGKQVENLTLTGGT 267
Query: 442 ALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL--GSYDDLRN 497
AL + L+ G D + + Y+ +YD
Sbjct: 268 ALNATGNGFANVLVGNSGVNMLDGGGGHDRLDGSIGADIMTGGTGNDTYVVDDAYDFTTE 327
Query: 498 V--FGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS--HEDLINAFADAPDLVQAGKDH 553
GSD ++ ++ E A+ I + LI AG D
Sbjct: 328 ASSGGSDLVESSVNHALGSNVENLTLTGTAAINGIGNILSNVLIGNSGVNILTGGAGNDT 387
Query: 554 FSNFGY--------EEGRSITFNPDLY--LTSYDDLWNVFGSDRSAAA 591
+ G F+ Y Y + N+ GS A
Sbjct: 388 YYIQNASDNVVEASSGGNDTVFSSVSYGLSARYIETLNLTGSANINAT 435
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 59/442 (13%), Positives = 112/442 (25%), Gaps = 77/442 (17%)
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
+F T + I + + + I D + T+
Sbjct: 107 NATGNSFANTLTGNSGNNILNGLAGNDSLDGGAGIDTLIGGAGDDTFTVDNAGDTVTELT 166
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
D
Sbjct: 167 G----------------------------------------------EGTDTVRSSLNYI 180
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-- 241
+ +++ + + + GN+ + + G+D + G
Sbjct: 181 LSANLEHLILLGASNANGTGND---GNNALTGNDGTNVLTGGLGNDTYYVQNTGDSVVEA 237
Query: 242 -----YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+++ ++S G +N+T+ T + + G+ +V++GNS N+ G+D
Sbjct: 238 ANAGFDTIVSSVTYSLAGKQVENLTLTGGTAL-NATGNGFANVLVGNSGVNMLDGGGGHD 296
Query: 297 VFD---------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
D G +G DT+ + + S+VE L
Sbjct: 297 RLDGSIGADIMTGGTGNDTYVVD--DAYDFTTEASSGGSDLVESSVNHALGSNVENLTLT 354
Query: 348 D-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF--GLSEGRDITFDSYLY 404
I+ + ++L + L G D + S G D F S Y
Sbjct: 355 GTAAINGIGNILSNVLIGNSGVNILTGGAGNDTYYIQNASDNVVEASSGGNDTVFSSVSY 414
Query: 405 L--GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
Y + N+ GS A + + N +A + D +N A L
Sbjct: 415 GLSARYIETLNLTGSANINATGNS----FAQALNGNAGNNNINALAGNDTLNGHAGNDSL 470
Query: 463 VQVGKDHFSNFGCEEGRFVTFD 484
F G D
Sbjct: 471 TGGAGGDMFVFDTTAGTASATD 492
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/380 (13%), Positives = 100/380 (26%), Gaps = 40/380 (10%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D T +TEL + R +L + ++++ +
Sbjct: 151 DTFTVDNAGDTVTELTGEGTDTVRSSLNYI------------LSANLEHLILLGASNANG 198
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D +V G+G T N + A Y +
Sbjct: 199 TGNDGNNALTGNDGTNVLTGGLGNDTYYVQNTGDSVVEAANAG--FDTIVSSVTYSLAGK 256
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ LT + + + + G G +
Sbjct: 257 QVENLTLTGGTALNATGNGFAN---------------VLVGNSGVNMLDGG----GGHDR 297
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
S + G+D + + S + N + + ++
Sbjct: 298 LDGSIGADIMTGGTGNDTYVVDDAYDFTTE---ASSGGSDLVESSVNHALGSNVENLTLT 354
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++ + + GN +NV +SG ++ G +G DT++ S V+ +
Sbjct: 355 GTAAINGI-GNILSNVLIGNSGVNILTGGAGNDTYYIQNASDNVVEASSGGNDTVFSSVS 413
Query: 333 HKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ +E L I++ L A ++ + G D
Sbjct: 414 YGL-SARYIETLNLTGSANINATGNSFAQALNGNAGNNNINALAGNDTLNGHAGNDSLTG 472
Query: 392 SEGRD-ITFDSYLYLGSYDD 410
G D FD+ S D
Sbjct: 473 GAGGDMFVFDTTAGTASATD 492
>gi|313682331|ref|YP_004060069.1| outer membrane adhesin like proteiin [Sulfuricurvum kujiense DSM
16994]
gi|313155191|gb|ADR33869.1| outer membrane adhesin like proteiin [Sulfuricurvum kujiense DSM
16994]
Length = 3343
Score = 83.7 bits (205), Expect = 8e-14, Method: Composition-based stats.
Identities = 76/573 (13%), Positives = 148/573 (25%), Gaps = 86/573 (15%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + S+ + ++ + D D G T+ + + +
Sbjct: 1003 AGAGNDTLSGSSGVDTLQGGGGNDLYLYVRGDGKDTVIDEAGADTLAFGEGIAQSD-LIE 1061
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
++ PGS + V +E S + ++ ++ D + +F + D+ A+Q
Sbjct: 1062 VVKPGSNDLLVGVREEGKSFEELSDVITIKNWVNTLDRVETITF---YDGSIIDLAAIQS 1118
Query: 194 IY-GAPKGSLGN-----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ GA G+ + + ++ G+D L +
Sbjct: 1119 VTEGADNLVYGDFTTTVDALGGDDTVITGTAADMLHGGSGNDTL----RSSAGDDTLYGD 1174
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--------- 298
++ N T++ +++ G +GND + GN N+ GND +
Sbjct: 1175 AGSDTLYAGIGNDTLSGGDGADTLYGENGNDTLAGNGGNDTLSGGLGNDTYRFALGEGKD 1234
Query: 299 -------DGSSGLDTFFYYAPSYLY-----KIYRFENAIIVYDANEHKQDFLSD------ 340
GS DT + + + I + D LSD
Sbjct: 1235 IFIDEYSYGSGDNDTLHFGEGITADNLVARAVSGSNDLQIAICESGKGFDELSDVVTLKN 1294
Query: 341 -------VERLRFADQCIDSVN--------------VKQRSILEYTASYEDLIQVIGQDV 379
+E +D S++ ++++ + +I G D
Sbjct: 1295 WFDANKRIENFVLSDGTSISLSQMQGGTDGDDYLVFGDSDTVIDALGGNDTVITANGNDT 1354
Query: 380 FESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
+ G D D+ G D R G + + G
Sbjct: 1355 LGGGTGNDILISNGGNDTLSGGSGADTLEGGGGSDTYRFGIGDGKDRITDSSGLDSLIFG 1414
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC-------------EEGRFV 481
A + S D + +G +
Sbjct: 1415 EGIIADNLIARFVSGSDDLQIGIREEGKNFDQLSDVITISGWRNVAYRVENLRLSDGSAI 1474
Query: 482 TFDSYLYLGSYDDLR-----NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
T + G DD V G G D L ++ L
Sbjct: 1475 TLTQIEHSGDGDDYLVFGDEGVIVDALGGNDTLITGDGADTVNGGDGNDTLLSGKGNDTL 1534
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
G D + F +G F+
Sbjct: 1535 SGGSGSDTLKGGTGNDTYL-FNRGDGADTIFDE 1566
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 66/473 (13%), Positives = 124/473 (26%), Gaps = 83/473 (17%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ ++ D D+ G ++ + A+ +
Sbjct: 809 GGSDTLNGGEGDDTLYGDEGNDTYIYNLGDGKDIITDLSGADSLRFGAGITAELIAVRYL 868
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + D+ + + + ++ T + D + V
Sbjct: 869 ANGDMMIALKDADKTFEELGDTI---TIKGWSNASNRIEQILLSDGTALSIDTLQV-GSE 924
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA G++ D G D++D G + I+ + S + G
Sbjct: 925 GADTLFFGDSGIVFNALGGDDRVTS----GSGADVID---GGSGNDTINAGNGANS-VHG 976
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + T+ + +S+ G SG D++ + N+ SSG D G G D + Y
Sbjct: 977 GEGDDTLMSGSGADSLEGGSGADILSAGAGNDTLSGSSGVDTLQGGGGNDLYLYVRGDGK 1036
Query: 316 YKIYRFENAIIVYDANEHKQ--------------------------------------DF 337
+ A + Q +
Sbjct: 1037 DTVIDEAGADTLAFGEGIAQSDLIEVVKPGSNDLLVGVREEGKSFEELSDVITIKNWVNT 1096
Query: 338 LSDVERLRFADQCI--------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
L VE + F D I + V + ++ + +I D+
Sbjct: 1097 LDRVETITFYDGSIIDLAAIQSVTEGADNLVYGDFTTTVDALGGDDTVITGTAADMLHGG 1156
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
S G D + D L G+D + D L
Sbjct: 1157 SGNDTLRSSAGDDTLYGDAG----SDTLYAGIGNDTLSG--------------GDGADTL 1198
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
++ L + +G D + F EG+ + D Y Y +D
Sbjct: 1199 YGENGNDTLAGNGGNDTLSGGLGNDTY-RFALGEGKDIFIDEYSYGSGDNDTL 1250
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/312 (13%), Positives = 78/312 (25%), Gaps = 13/312 (4%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
D + G T + D+ G T+ + +
Sbjct: 1331 GDSDTVIDALGGNDTVITANGNDTLGGGTGNDILISNGGNDTLSGGSGADTLEGG----- 1385
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
G + G D DS + + + + + D+ + G
Sbjct: 1386 -GGSDTYRFGIGDGKDRITDSSGLDSLIFGEGIIADNLIARFVSGS---DDLQIGIREEG 1441
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
L + I + G L G + + + +
Sbjct: 1442 KNFDQLSDVITISGWRNVAYRVENLRLSDGSAITLTQIEHSGDGDDYLVFGDEGVIVDAL 1501
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N T+ ++V G GND ++ N+ SG+D G +G DT+ +
Sbjct: 1502 GGNDTLITGDGADTVNGGDGNDTLLSGKGNDTLSGGSGSDTLKGGTGNDTYLFNRGDGAD 1561
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
I+ I QD L + + + + +
Sbjct: 1562 TIFDELGNDIFTFGEGITQDDL----IFKQQGNTLLIGIAEVNKTFDQLSDVVTFTDWFK 1617
Query: 377 QDVFESMKHFYE 388
D HF +
Sbjct: 1618 TDTNVESLHFAD 1629
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 8/147 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
++ + G+D L + L+GG N + + G N T++
Sbjct: 3108 NNTVSGGKDDDILFGNDGNDTLLGDTENDLLVGGEGNDTLSGGDGADILYGDNGNDTLSG 3167
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G +GND + G + N++ G + G SG DT+ + I
Sbjct: 3168 DAGNDKLFGGNGNDTLFGGNGNDLLSGGEGTNTLSGGSGDDTYLIIKGTPNTTITENVLG 3227
Query: 325 IIV---YDANEHKQDFLSDVERLRFAD 348
+ + E D L E + D
Sbjct: 3228 FGLFGRWFGQEGGTDILKFGEEITKED 3254
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 62/452 (13%), Positives = 122/452 (26%), Gaps = 29/452 (6%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
F T S + D G T+ + +
Sbjct: 1130 DFTTTVDALGGDDTVITGTAADMLHGGSGNDTLRSSAGDDTLYGDAGSDTLYAGIGNDTL 1189
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
G NG + G + L + F + Y +D
Sbjct: 1190 SGGDGADTLYGENGNDTLAGNGGNDTLSGGLGNDTYRFALGEGKDIFIDEYSYGSGDNDT 1249
Query: 189 V----AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+ + + G+N +I + + F + + D D
Sbjct: 1250 LHFGEGITADNLVARAVSGSNDLQIAICESGKGFDELSDVVTLKNWFDANKRIENFVLSD 1309
Query: 245 LNTESWSSIGGYEKNM----------TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ S S + G I ++V+ ++GND + G + N++ + G
Sbjct: 1310 GTSISLSQMQGGTDGDDYLVFGDSDTVIDALGGNDTVITANGNDTLGGGTGNDILISNGG 1369
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND G SG DT S Y+ + + D++ ++ L F + I
Sbjct: 1370 NDTLSGGSGADTLEGGGGSDTYRFGIGDGKDRITDSS--------GLDSLIFGEGIIAD- 1420
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
I + + +DL I ++ + +S R++ + S +
Sbjct: 1421 ----NLIARFVSGSDDLQIGIREEGKNFDQLSDVITISGWRNVAYRVENLRLSDGSAITL 1476
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH--EDLINAFADAPDLVQVGKDHFSN 472
+ Y+ G + I + + + L G D S
Sbjct: 1477 TQIEHSGDGDDYLVFGDEGVIVDALGGNDTLITGDGADTVNGGDGNDTLLSGKGNDTLSG 1536
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ + YL + D + + G
Sbjct: 1537 GSGSDTLKGGTGNDTYLFNRGDGADTIFDELG 1568
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 74/269 (27%), Gaps = 44/269 (16%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
G N + SY ++ D + + I
Sbjct: 2981 TIDDGNGGSTVATLNFTNLMTPDWQ-YSYAGETLTINDNDGTDTVMMNTVSMNELTFIQE 3039
Query: 197 APKGSLG----NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY--IDLNTESW 250
+ ++ + + +++I S G+ L IG ++ I L
Sbjct: 3040 GNNLRIDVKDQPDVLLTDYFASPANGVESIQTSEGNINLFKEQIGTSGSFFGIALGNNHD 3099
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ I G KN T++ + + G+ GND ++G++ N++ GND G G D +
Sbjct: 3100 NLISGNTKNNTVSGGKDDDILFGNDGNDTLLGDTENDLLVGGEGNDTLSGGDGADILY-- 3157
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
++ D LS L +
Sbjct: 3158 --------------------GDNGNDTLSGD---------------AGNDKLFGGNGNDT 3182
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITF 399
L G D+ + G D
Sbjct: 3183 LFGGNGNDLLSGGEGTNTLSGGSGDDTYL 3211
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/380 (13%), Positives = 91/380 (23%), Gaps = 60/380 (15%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G + G ND S V Y G T ++DI+ I
Sbjct: 664 NGSAGSTVLAGEGNDVLRGSSGNDVYLYRRGDGVDTIIDGGGSDTLRLTDILQSDII--- 720
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SI 253
I ++ F + + + + D ++ +S
Sbjct: 721 --LRSSGTDLIIGCVEEGKTFEELGNTVTLVNWAESANRIENVRFSDGSSLDFSQVIKDY 778
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ I + + +GNDVV G ++ G+D G G DT+ Y
Sbjct: 779 FITNNDDRIDLTASSDIINTLAGNDVVHGLGGSDTLNGGEGDDTLYGDEGNDTYIYNLGD 838
Query: 314 YLYKIYRFENAIIVYDANEHKQDFL----------------------------------- 338
I A + + +
Sbjct: 839 GKDIITDLSGADSLRFGAGITAELIAVRYLANGDMMIALKDADKTFEELGDTITIKGWSN 898
Query: 339 --SDVERLRFADQCIDSV-----NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ +E++ +D S+ + L + S + G D S
Sbjct: 899 ASNRIEQILLSDGTALSIDTLQVGSEGADTLFFGDSGIVFNALGGDDRVTSGSGADVIDG 958
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
G D G+ + + D + G L A ++
Sbjct: 959 GSGNDTIN-----AGNGANSVHGGEGDDTLMSG----SGADSLEGGSGADILSAGAGNDT 1009
Query: 452 LINAFADAPDLVQVGKDHFS 471
L + G D +
Sbjct: 1010 LSGSSGVDTLQGGGGNDLYL 1029
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/268 (10%), Positives = 67/268 (25%), Gaps = 16/268 (5%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG----------KGTILSH 122
T + I++ Y + + D AD G + +
Sbjct: 2306 TQTTENGNIITNETNYTTLLDTGTMRDVWFKIDAADTITDNDTIYGTLDEETLSGDVGND 2365
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
+ G + ++ + + + + + T
Sbjct: 2366 TYVIAYGGGIDVIDDHGEGADTIKFINGITPDRLIVQWIRGTDDLRIGIRENGQDDTPMT 2425
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+ + + + NI + + Q IYD + DL
Sbjct: 2426 ELAN------TLTIKNWFNRTGNIEQFIFNDTTALDRQGIYDLLLNVEGDLIARVLDSEG 2479
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ G + + + + + G SG+D + + ++ G D +G
Sbjct: 2480 TLSGNSGNDLLYGADGGEVLNGNGGDDYLRGLSGDDRLDAGNGDDTLNGEVGADTLEGGM 2539
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G D + + I +Y
Sbjct: 2540 GNDYYLFDKGDGKDLIIDTGGIDTLYFG 2567
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 30/82 (36%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ S N TI + + GNDV+ G N+V S+G+D S+G D +
Sbjct: 1795 TDESFETNGGNDTINAGGGNDRIDAGIGNDVIEGGDGNDVITMSAGDDTVTDSAGDDVYL 1854
Query: 309 YYAPSYLYKIYRFENAIIVYDA 330
Y +Y V
Sbjct: 1855 YNRGDGQDTVYDLGGNDKVMFG 1876
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 53/401 (13%), Positives = 97/401 (24%), Gaps = 79/401 (19%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF--FESSGNDVFDGSSG 303
+ + ++G + +V+ GNDV+ G+S N+V+ G D G
Sbjct: 646 TSGNILAVGSENGESITINGSAGSTVLAGEGNDVLRGSSGNDVYLYRRGDGVDTIIDGGG 705
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF---------------LSDVERLRFAD 348
DT I R ++ E + F + +E +RF+D
Sbjct: 706 SDTLRLTDILQSDIILRSSGTDLIIGCVEEGKTFEELGNTVTLVNWAESANRIENVRFSD 765
Query: 349 Q-----------------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
I+ A + + + G D +
Sbjct: 766 GSSLDFSQVIKDYFITNNDDRIDLTASSDIINTLAGNDVVHGLGGSDTLNGGEGDDTLYG 825
Query: 392 SEGRDITF-------DSYLYLGSYDDLRNVFGSDRGAAARHYITHG-------------- 430
EG D D L D LR G A Y+ +G
Sbjct: 826 DEGNDTYIYNLGDGKDIITDLSGADSLRFGAGITAELIAVRYLANGDMMIALKDADKTFE 885
Query: 431 ---------------------VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ + L+ + D + +G D
Sbjct: 886 ELGDTITIKGWSNASNRIEQILLSDGTALSIDTLQVGSEGADTLFFGDSGIVFNALGGDD 945
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
G + + + +V G + G L
Sbjct: 946 RVTSGSGADVIDGGSGNDTINAGNGANSVHGGEGDDTLM--SGSGADSLEGGSGADILSA 1003
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
A ++ L + G D + + +G+ +
Sbjct: 1004 GAGNDTLSGSSGVDTLQGGGGNDLYL-YVRGDGKDTVIDEA 1043
Score = 41.7 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 33/268 (12%), Positives = 65/268 (24%), Gaps = 36/268 (13%)
Query: 229 DLLDLTLIGGVKNYIDLNT-ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA-- 285
D L ++ +++N +WS + I+ G S + +
Sbjct: 2942 DTLSYSVTAPEHGVLNINESGAWSYTAEPYYAGQSSATVTIDDGNGGSTVATLNFTNLMT 3001
Query: 286 NNVFFESSGND-VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----- 339
+ + +G + + G DT S + E + D + L+
Sbjct: 3002 PDWQYSYAGETLTINDNDGTDTVMMNTVSMNELTFIQEGNNLRIDVKDQPDVLLTDYFAS 3061
Query: 340 ---DVERLRFADQCID------------------------SVNVKQRSILEYTASYEDLI 372
VE ++ ++ I+ + + + + L
Sbjct: 3062 PANGVESIQTSEGNINLFKEQIGTSGSFFGIALGNNHDNLISGNTKNNTVSGGKDDDILF 3121
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D EG D Y D N S + + +G
Sbjct: 3122 GNDGNDTLLGDTENDLLVGGEGNDTLSGGDGADILYGDNGNDTLSGDAGNDKLFGGNGND 3181
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAP 460
+ L L D
Sbjct: 3182 TLFGGNGNDLLSGGEGTNTLSGGSGDDT 3209
Score = 40.9 bits (94), Expect = 0.71, Method: Composition-based stats.
Identities = 41/381 (10%), Positives = 98/381 (25%), Gaps = 33/381 (8%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + T +D + G G T L + L
Sbjct: 1509 TGDGADTVNGGDGNDTLLSGKGNDTLSGGSGSDTLKGGTGNDTYLFNRGDGADTIFDELG 1568
Query: 136 HP-GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ ++ G + + ++ L + D + D +++ ++
Sbjct: 1569 NDIFTFGEGITQDDLIFKQQGNTLLIGIAEVNKTFDQLSDVVTFTDWFKTDTNVESLHFA 1628
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQT---IYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
G+ + + + +T +Y G++ + D +
Sbjct: 1629 DGSFMSRSDVAGLFVPNDIDGALYSKTGAQMYGGSGNNAYVYNRGDFIVVIDDSYKQGDI 1688
Query: 252 SIGGYEKNMTIAQHTV-IESVVGSSGNDVVIGNSANNVFFESSGNDVF-----DGSSGLD 305
+ E + ++ + G GND+++ + +E + V D + G++
Sbjct: 1689 EVNAGEDTLYLSGGINKNDVTFGVVGNDLILKITPKVETYEQLRDYVVIKNWADTNKGVE 1748
Query: 306 TFFYYAP---------------------SYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ S YKIY + +V + + + +
Sbjct: 1749 KVIFSNGEILTIDKTAAYPVTTFNYAWVSSRYKIYGDDVNTVVGTVTDESFETNGGNDTI 1808
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
++E + + G D + + G D+
Sbjct: 1809 NAGGGNDRIDAGIGNDVIEGGDGNDVITMSAGDDTVTDSAGDDVYLYNRGD--GQDTVYD 1866
Query: 405 LGSYDDLRNVFGSDRGAAARH 425
LG D + G
Sbjct: 1867 LGGNDKVMFGEGISVEDVLVQ 1887
>gi|237731510|ref|ZP_04561991.1| heme peroxidase [Citrobacter sp. 30_2]
gi|226907049|gb|EEH92967.1| heme peroxidase [Citrobacter sp. 30_2]
Length = 1777
Score = 83.7 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 50/312 (16%), Positives = 82/312 (26%), Gaps = 44/312 (14%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
P I + G + L +G + I ++ G + + ++
Sbjct: 1456 TSTTTQPVGDLIVGTNGANTL----VGTAWSDILRGEGGNDTLLGGAGDDLLIGGAGNDN 1511
Query: 271 VVGSSGNDVVIGNSANNVF---------FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ G +G D++ G++ N+ +G+D + I
Sbjct: 1512 LSGQAGQDILQGDAGNDTLDGGLGADSMTGGTGDDT----------YIVDDFGDVVIEGV 1561
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQ----------CIDSVNVKQRSILEYTASYEDL 371
V N D +VE L F L + L
Sbjct: 1562 NGGTDVVRTNLSSYDLTDNVEELVFTGSGSFIGTGNAIANTITGGTGNDYLFGMGGNDQL 1621
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
IG D + G D+ + D L G D
Sbjct: 1622 FGGIGNDFLDGGDGADNLQGGVGNDV----MIGGAGADTLSGGSGDDILNGQEGNDILDG 1677
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
G + AF A +D I F P+ Q D G G F + S G+
Sbjct: 1678 GAGSDIFAFGANF----GQDRITGFDSNPNGGQDFLD-LVLLGINAGNFAS--SVSITGN 1730
Query: 492 YDDLRNVFGSDR 503
+ G+D
Sbjct: 1731 NGNTIVTIGTDT 1742
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/342 (11%), Positives = 89/342 (26%), Gaps = 38/342 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
++ + R + + D+ G G + +
Sbjct: 1469 GTNGANTLVGTAWSDILRGEGGNDTLLGGAGDDLLIGGAGNDNLSGQAGQDIL------- 1521
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G ++ + T +Y + +
Sbjct: 1522 ---QGDAGNDTLDGGLGADSMTGGTGDDTYIVDDFGDVVIEGV---------------NG 1563
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + Y + ++ F + G + + T+ GG N + G
Sbjct: 1564 GTDVVRTNLSSYDLTDNVEELVFTGSGSFIGTGNAIANTITGGTGNDYLFGMGGNDQLFG 1623
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N + +++ G GNDV+IG + + SG+D+ +G G D
Sbjct: 1624 GIGNDFLDGGDGADNLQGGVGNDVMIGGAGADTLSGGSGDDILNGQEGNDI--------- 1674
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + I QD ++ + Q + + + + AS +
Sbjct: 1675 --LDGGAGSDIFAFGANFGQDRITGFDSNPNGGQDFLDLVLLGINAGNF-ASSVSITGNN 1731
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
G + + YL L + G+
Sbjct: 1732 GNTIVTIGTDTITLVGVNSTTVNIGD-FYLEMPTTLASNNGN 1772
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 67/219 (30%), Gaps = 12/219 (5%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
Y+ + +GG N T+ I+S+ G G+D + G +V G+D+
Sbjct: 830 ADGGYLKYTGDGHVVLGGTAGNDTLIGGKGIDSLWGDGGDDRLDGGDEADVVHGGDGDDI 889
Query: 298 F--DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID-SV 354
G+ D F + + I+ +V+ + + + + F+ Q D ++
Sbjct: 890 ITDTGTPVGDADFLHGDAGHDVIFSGNGNDLVFGGSGSDFVVVGEDAQEVFSGQDNDFAL 949
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL---------SEGRDITFDSYLYL 405
L + L G D F +G D +D
Sbjct: 950 GGSGGDFLMGNEGDDWLEGGDGFDTLAGDNSELFFNSTIIGHDVLNGQGNDTDYDGEAGD 1009
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ ++ A I G G N D +
Sbjct: 1010 DIMVQGAGIQRNNGMAGFDWAIHKGDPNGANSDLGIPIF 1048
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/169 (14%), Positives = 47/169 (27%), Gaps = 18/169 (10%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
++ GDD++ T I N + + + VV
Sbjct: 878 ADVVHGGDGDDIITDTGTPVGDADFLHGDAGHDVIFSGNGNDLVFGGSGSDFVVVGEDAQ 937
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V N+ SG D G+ G D + + +N+ + +++ D L
Sbjct: 938 EVFSGQDNDFALGGSGGDFLMGNEGDD---WLEGGDGFDTLAGDNSELFFNSTIIGHDVL 994
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + + A + ++Q G M F
Sbjct: 995 NG---------------QGNDTDYDGEAGDDIMVQGAGIQRNNGMAGFD 1028
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/233 (14%), Positives = 53/233 (22%), Gaps = 12/233 (5%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF--- 399
+ + V IL + L+ G D+ G+DI
Sbjct: 1466 LIVGTNGANTLVGTAWSDILRGEGGNDTLLGGAGDDLLIGGAGNDNLSGQAGQDILQGDA 1525
Query: 400 -DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+ L G D D + + EG N ++S++ N
Sbjct: 1526 GNDTLDGGLGADSMTGGTGDDTYIVDDFGDVVI-EGVNGGTDVVRTNLSSYDLTDNVEEL 1584
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
+ D +G D L G+D G
Sbjct: 1585 VFTGSGSFIGTGNAIANTITGGTGNDYLFGMGGNDQLFGGIGNDFLD-----GGDGADNL 1639
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
+ + A + L D Q G D G F +
Sbjct: 1640 QGGVGNDVMIGGAGADTLSGGSGDDILNGQEGND--ILDGGAGSDIFAFGANF 1690
>gi|113474447|ref|YP_720508.1| hypothetical protein Tery_0591 [Trichodesmium erythraeum IMS101]
gi|110165495|gb|ABG50035.1| FG-GAP [Trichodesmium erythraeum IMS101]
Length = 813
Score = 83.7 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 55/183 (30%), Gaps = 14/183 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
K + I GG D L G N L + G N T+ +
Sbjct: 536 NNTLKGNNKANFINGVGGKDNLK----GSGGNDTILGGGGNDRLDGNSGNDTLTGEAGND 591
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+ G SGND + G N++ SG D DGS G D S K+ +
Sbjct: 592 SLNGGSGNDKLNGGGGNDILNGGSGRDRLDGSGGNDIL--NGGSSNDKLNGGGGNDKLNG 649
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ RL + + ++LI G D+ +F
Sbjct: 650 GSGRD--------RLIGNNGKDILTGGSGNDTILGGGGDDELIGGSGNDLLNGGSGDDKF 701
Query: 390 GLS 392
S
Sbjct: 702 IYS 704
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 56/173 (32%), Gaps = 8/173 (4%)
Query: 199 KGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESW 250
G+ GN+ + GG+D+L+ L G N I S
Sbjct: 576 DGNSGNDTLTGEAGNDSLNGGSGNDKLNGGGGNDILNGGSGRDRLDGSGGNDILNGGSSN 635
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N + + + ++G++G D++ G S N+ G+D G SG D
Sbjct: 636 DKLNGGGGNDKLNGGSGRDRLIGNNGKDILTGGSGNDTILGGGGDDELIGGSGNDLLNGG 695
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + + + +F +++ S++
Sbjct: 696 SGDDKFIYSSRKAFNRKTFGKDRIANFAPGSDKIILDKTTFTSLDSTAGESFS 748
Score = 42.9 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 35/299 (11%), Positives = 71/299 (23%), Gaps = 29/299 (9%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
++ +++V + L L + + S G D
Sbjct: 516 NRDSSNISVILNTSLIGNNKNNTLKGNNKANFINGVGGKDNLKGSGGNDTILG------- 568
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
G+DR G +L + ++ L + G+
Sbjct: 569 ------GGGNDRLD-----GNSGNDTLTGEAGNDSLNGGSGNDKLNGGGGNDILNGGSGR 617
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
D G + + G + + GS R +G +
Sbjct: 618 DRLDGSGGNDILNGGSSNDKLNGGGGNDKLNGGSGRDRLI---GNNGKDILTGGSGNDTI 674
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDR 587
++LI + +G D F + FN T D F
Sbjct: 675 LGGGGDDELIGGSGNDLLNGGSGDDKFIYSSRK-----AFNRK---TFGKDRIANFAPGS 726
Query: 588 SAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
T + A + + + + + + + +LY + G
Sbjct: 727 DKIILDKTTFTSLDSTAGESFSNDSEFEIVTNNSAASSSSAEIVYVSSTGNLYYNPNGS 785
>gi|294678042|ref|YP_003578657.1| integrin alpha repeat/hemolysin-type calcium-binding repeat family
protein [Rhodobacter capsulatus SB 1003]
gi|294476862|gb|ADE86250.1| integrin alpha repeat/hemolysin-type calcium-binding repeat family
protein [Rhodobacter capsulatus SB 1003]
Length = 1071
Score = 83.7 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 85/592 (14%), Positives = 153/592 (25%), Gaps = 55/592 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + D G + L + A G
Sbjct: 494 TAAGAAVVLYGGSFASRLSGSIGNDTLSGSTGDDAVLGFAGNDLLYGAAGLDALLGAAGD 553
Query: 135 MHPGSYNGGYPVYGVDND--YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G + G D Y DS +V + P+ + + D+
Sbjct: 554 DTLDGGAGDDTLRGGAGDDTYVVDSATDTVCEFCTPEGTEDAGGADTVLARVSYDL---- 609
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ + +I+T+ G L+ G + + +
Sbjct: 610 ------------------TRCAGACYIETLILIG---TGALSATGNALGNRLIGNGAANL 648
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E + + + G GND + G + +V +GNDV+ S D
Sbjct: 649 LRGLEGADLLDGSDGDDRLEGGDGNDRLQGGAGADVLLGGAGNDVYTVESDADQVLETLS 708
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDL 371
+ + ++ + + VERL I++ + L L
Sbjct: 709 ETDLRDAGGIDTVLTSVSYSLAAPGRAFVERLVLTGTAAINATGNGLDNTLTGNGGANRL 768
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G DV + + D + S DLR+ G D + Y G
Sbjct: 769 SGGAGSDVMIGGAGNDIYFVER----VTDRVVETISESDLRDAGGIDTVMTSVSYGLTGA 824
Query: 432 ------KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ A A L A GKD + V +
Sbjct: 825 TRAFVERLVLTGTAAINATGNALDNWLTGNGAANRLDGGAGKDLLLGGAGNDTYIVENAA 884
Query: 486 YLYLG--SYDDLRNVFGSDRGAAARHYITHG-----VKEGRNPDAFKALEYIASH--EDL 536
+ S DLR+ G D + Y G E A+ + +
Sbjct: 885 DRVVETISETDLRDAGGIDTVMTSVSYSLTGAAPRAFVERLVLTGTAAINGTGNGLANQI 944
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
G D + G S F+ + D + + D + + +
Sbjct: 945 SGNAGANRISGGLGLD--TLSGGGGADSFVFDTAPAPDNLDRILDFNPLDDTLRFEDAVF 1002
Query: 597 HGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
+ GR + + + AD L ++ L+ D G
Sbjct: 1003 AALVPGRVAS------GAFVINTTGLAQDADDRLIYESDTGRLFYDPNGTAA 1048
>gi|283464606|gb|ADB22829.1| GtxA [Gallibacterium anatis]
Length = 2026
Score = 83.7 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 59/359 (16%), Positives = 104/359 (28%), Gaps = 49/359 (13%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ FIS++ + + IN + G G T ++ N GH+L
Sbjct: 1503 DGAGNNIFISNDKYASVLYDENGKLLKHINLN----INAGDGNDTYIADN-----GHSL- 1552
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G D+ N+ + ++ + + A V +I
Sbjct: 1553 ---------FNGGNGTDSVSYNNEHIHGIVVHGRDAGTYSVTKHIADAEVTVENIKVKNH 1603
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
YG + + IE + D+ + + D + G N L +
Sbjct: 1604 QYGKRQERVEYRELHIETKSYDASDMLYNVEVISASDYDDVMYGSKGNDYFLAQNGNDLV 1663
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G E + I G +G+D + G + N+ G D+ G G DT
Sbjct: 1664 YGKEGDDII---------FGGAGDDKLYGETGNDTLNGGLGKDLIYGGEGNDTIIQDDAL 1714
Query: 314 YLYKIYRFENAIIV----YDANEHKQ-----------------DFLSDVERLRFADQCID 352
I+ E + N+ D + D+E + +
Sbjct: 1715 SSDTIFGDEGIDTLDLRHLVINDEGLGVVADLQSEKLYKGTIFDHIYDIENIIGTSGNDN 1774
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ + +IL + L G DV + +G DI S DL
Sbjct: 1775 LIGNHKDNILIGNDGDDILEGYSGNDVLAGGSGINKLYGGQGADIYLLSTNATNYIFDL 1833
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 58/414 (14%), Positives = 117/414 (28%), Gaps = 52/414 (12%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS--HNAL 125
+ + + +I+ N + + N + +G GT H A
Sbjct: 1531 INLNINAGDGNDTYIADNGHSLFNGGNGTDSVSYNNEHIHGIVVHGRDAGTYSVTKHIAD 1590
Query: 126 HEIG-HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
E+ + + + V + E S+ S M Y + S D +
Sbjct: 1591 AEVTVENIKVKNHQYGKRQERVEYRELHIETKSYDASDMLYNVEVISASDYDDVMYGSKG 1650
Query: 185 VSDIVA---VQKIYGAPKGS-----LGNN-IYK--IEVQQKDSPFIQTIYDSGGDDLL-- 231
+A +YG G++ +Y IY G+D +
Sbjct: 1651 NDYFLAQNGNDLVYGKEGDDIIFGGAGDDKLYGETGNDTLNGGLGKDLIYGGEGNDTIIQ 1710
Query: 232 ------DLTLIGGVKNYIDLNTESWSSIG----------------------------GYE 257
D + +DL + G G
Sbjct: 1711 DDALSSDTIFGDEGIDTLDLRHLVINDEGLGVVADLQSEKLYKGTIFDHIYDIENIIGTS 1770
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + + ++G+ G+D++ G S N+V SG + G G D + + Y
Sbjct: 1771 GNDNLIGNHKDNILIGNDGDDILEGYSGNDVLAGGSGINKLYGGQGADIYLLSTNATNYI 1830
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+N + + +E + N ++I+E ++ + G
Sbjct: 1831 FDLTKNNLAKLENSEDLNLQFTKDSDDNVTLSFNKDGNTIGKTIIEKSSQFGTFSIGDGY 1890
Query: 378 --DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
D+ + + G S D+ ++ + + + D H H
Sbjct: 1891 YLDLNDGKFKYILSGESSNADLAQNTLHFNKGEELQVHAAAKDNQIILDHEHQH 1944
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 62/472 (13%), Positives = 130/472 (27%), Gaps = 65/472 (13%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLNTESWSSIGGYE 257
+ GN++ K + + G + DL + G ++ I+ + I +
Sbjct: 1456 TAPGNSLIKFNSPLFAPGVEEARRKAVGKNNFYTDLIINGPNEHTINDGAGNNIFISNDK 1515
Query: 258 KNMTIAQHTV------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL--DTFFY 309
+ ++ GND I ++ +++F +G D ++ +
Sbjct: 1516 YASVLYDENGKLLKHINLNINAGDGNDTYIADNGHSLFNGGNGTDSVSYNNEHIHGIVVH 1575
Query: 310 YAPSYLYKIYRF--ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE---- 363
+ Y + + + + V + + ER+ + + I++ + +L
Sbjct: 1576 GRDAGTYSVTKHIADAEVTVENIKVKNHQYGKRQERVEYRELHIETKSYDASDMLYNVEV 1635
Query: 364 --YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRN---- 413
+ + + G D F + EG DI F D LY + +D N
Sbjct: 1636 ISASDYDDVMYGSKGNDYFLAQNGNDLVYGKEGDDIIFGGAGDDKLYGETGNDTLNGGLG 1695
Query: 414 ------VFGSDRGAAARHYITHG--VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
G+D + EG + + L ++
Sbjct: 1696 KDLIYGGEGNDTIIQDDALSSDTIFGDEGIDTLDLRHLVINDEGLGVVADLQSEKLYKGT 1755
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
DH + G +G++ D +
Sbjct: 1756 IFDHIYDIENIIGTSGN---DNLIGNHKDNILIGNDGD---------------------D 1791
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLY----LTSYDDLWN 581
LE + ++ L G D + + F+ L + +DL
Sbjct: 1792 ILEGYSGNDVLAGGSGINKLYGGQGADIYLLS--TNATNYIFDLTKNNLAKLENSEDLNL 1849
Query: 582 VFGSD-RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSF 632
F D + G G+ + QF + D D +
Sbjct: 1850 QFTKDSDDNVTLSFNKDGNTIGKTIIEKSSQFGTFSIGDGYYLDLNDGKFKY 1901
>gi|332289841|ref|YP_004420693.1| RTX toxin GtxA [Gallibacterium anatis UMN179]
gi|330432737|gb|AEC17796.1| RTX toxin GtxA [Gallibacterium anatis UMN179]
Length = 2038
Score = 83.7 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 59/359 (16%), Positives = 104/359 (28%), Gaps = 49/359 (13%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ FIS++ + + IN + G G T ++ N GH+L
Sbjct: 1515 DGAGNNIFISNDKYASVLYDENGKLLKHINLN----INAGDGNDTYIADN-----GHSL- 1564
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G D+ N+ + ++ + + A V +I
Sbjct: 1565 ---------FNGGNGTDSVSYNNEHIHGIVVHGRDAGTYSVTKHIADAEVTVENIKVKNH 1615
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
YG + + IE + D+ + + D + G N L +
Sbjct: 1616 QYGKRQERVEYRELHIETKSYDASDMLYNVEVISASDYDDVMYGSKGNDYFLAQNGNDLV 1675
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G E + I G +G+D + G + N+ G D+ G G DT
Sbjct: 1676 YGKEGDDII---------FGGAGDDKLYGETGNDTLNGGLGKDLIYGGEGNDTIIQDDAL 1726
Query: 314 YLYKIYRFENAIIV----YDANEHKQ-----------------DFLSDVERLRFADQCID 352
I+ E + N+ D + D+E + +
Sbjct: 1727 SSDTIFGDEGIDTLDLRHLVINDEGLGIVADLQSEKLYKGTIFDHIYDIENIIGTSGNDN 1786
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ + +IL + L G DV + +G DI S DL
Sbjct: 1787 LIGNHKDNILIGNDGDDILEGYSGNDVLAGGSGINKLYGGQGADIYLLSTNATNYIFDL 1845
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 58/414 (14%), Positives = 116/414 (28%), Gaps = 52/414 (12%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS--HNAL 125
+ + + +I+ N + + N + +G GT H A
Sbjct: 1543 INLNINAGDGNDTYIADNGHSLFNGGNGTDSVSYNNEHIHGIVVHGRDAGTYSVTKHIAD 1602
Query: 126 HEIG-HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
E+ + + + V + E S+ S M Y + S D +
Sbjct: 1603 AEVTVENIKVKNHQYGKRQERVEYRELHIETKSYDASDMLYNVEVISASDYDDVMYGSKG 1662
Query: 185 VSDIVA---VQKIYGAPKGS-----LGNN-IYK--IEVQQKDSPFIQTIYDSGGDDLL-- 231
+A +YG G++ +Y IY G+D +
Sbjct: 1663 NDYFLAQNGNDLVYGKEGDDIIFGGAGDDKLYGETGNDTLNGGLGKDLIYGGEGNDTIIQ 1722
Query: 232 ------DLTLIGGVKNYIDLNTESWSSIG----------------------------GYE 257
D + +DL + G G
Sbjct: 1723 DDALSSDTIFGDEGIDTLDLRHLVINDEGLGIVADLQSEKLYKGTIFDHIYDIENIIGTS 1782
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + + ++G+ G+D++ G S N+V SG + G G D + + Y
Sbjct: 1783 GNDNLIGNHKDNILIGNDGDDILEGYSGNDVLAGGSGINKLYGGQGADIYLLSTNATNYI 1842
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+N + + +E + N ++I+E + + G
Sbjct: 1843 FDLTKNNLAKLENSEDLNLQFTKDSDDNVTLSFNKDGNTIGKTIIEKASQFGTFSIGDGY 1902
Query: 378 --DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
D+ + + G S D+ ++ + + + D H H
Sbjct: 1903 YLDLNDGKFKYILSGESSNADLAQNTLHFNKGEELQVHAAAKDNRIILDHEHQH 1956
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 62/472 (13%), Positives = 130/472 (27%), Gaps = 65/472 (13%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLNTESWSSIGGYE 257
+ GN++ K + + G + DL + G ++ I+ + I +
Sbjct: 1468 TAPGNSLIKFNSPLFAPGVEEARRKAVGKNNFYTDLIINGPNEHTINDGAGNNIFISNDK 1527
Query: 258 KNMTIAQHTV------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL--DTFFY 309
+ ++ GND I ++ +++F +G D ++ +
Sbjct: 1528 YASVLYDENGKLLKHINLNINAGDGNDTYIADNGHSLFNGGNGTDSVSYNNEHIHGIVVH 1587
Query: 310 YAPSYLYKIYRF--ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE---- 363
+ Y + + + + V + + ER+ + + I++ + +L
Sbjct: 1588 GRDAGTYSVTKHIADAEVTVENIKVKNHQYGKRQERVEYRELHIETKSYDASDMLYNVEV 1647
Query: 364 --YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRN---- 413
+ + + G D F + EG DI F D LY + +D N
Sbjct: 1648 ISASDYDDVMYGSKGNDYFLAQNGNDLVYGKEGDDIIFGGAGDDKLYGETGNDTLNGGLG 1707
Query: 414 ------VFGSDRGAAARHYITHG--VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
G+D + EG + + L ++
Sbjct: 1708 KDLIYGGEGNDTIIQDDALSSDTIFGDEGIDTLDLRHLVINDEGLGIVADLQSEKLYKGT 1767
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
DH + G +G++ D +
Sbjct: 1768 IFDHIYDIENIIGTSGN---DNLIGNHKDNILIGNDGD---------------------D 1803
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLY----LTSYDDLWN 581
LE + ++ L G D + + F+ L + +DL
Sbjct: 1804 ILEGYSGNDVLAGGSGINKLYGGQGADIYLLS--TNATNYIFDLTKNNLAKLENSEDLNL 1861
Query: 582 VFGSD-RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSF 632
F D + G G+ + QF + D D +
Sbjct: 1862 QFTKDSDDNVTLSFNKDGNTIGKTIIEKASQFGTFSIGDGYYLDLNDGKFKY 1913
>gi|291567294|dbj|BAI89566.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 2218
Score = 83.7 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 87/274 (31%), Gaps = 20/274 (7%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ + + + T+ I G E++ I + V+ N+++ G + N+
Sbjct: 1947 ASGVFTSDDGVIQGTQGDDVIVGTEEDDIILAGQGDDIVIAGDRNNLIFGEAGNDTLIGG 2006
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-------KQDFLSDVE--- 342
GND G+ G D F S +IY + + + DF+ E
Sbjct: 2007 PGNDTLFGNQGNDLIF--GGSGNDEIYGGQGNDTISGGGGNDLIFGGLGDDFIEGNEGNN 2064
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF--- 399
L ++ + + G D EG D+ F
Sbjct: 2065 TLFGNQGNDTIFGGSGDDLIYGGQGNDLIHGGSGNDTLFGDAGNDTIFGEEGDDLIFGGE 2124
Query: 400 --DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
D + D L G DR A + T+ + + L+ + E+L A
Sbjct: 2125 GDDILIGAEGNDTLTGGEGRDRFVIAATHGTNTITDFTVGQDMILLDGGLTFEELTIASV 2184
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFV---TFDSYLY 488
+ + +G + + + FD+++Y
Sbjct: 2185 GSQTQIILGSQVLAELLGVDANAITQNDFDTFVY 2218
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 60/186 (32%), Gaps = 10/186 (5%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGA--PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
D FG ++ +IYG G I + G++
Sbjct: 2008 GNDTLFGNQGNDLIFGGSGNDEIYGGQGNDTISGG---GGNDLIFGGLGDDFIEGNEGNN 2064
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
L G N I G + N I + +++ G +GND + G +++
Sbjct: 2065 TL----FGNQGNDTIFGGSGDDLIYGGQGNDLIHGGSGNDTLFGDAGNDTIFGEEGDDLI 2120
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
F G+D+ G+ G DT + I + D QD + L F +
Sbjct: 2121 FGGEGDDILIGAEGNDTLTGGEGRDRFVIAATHGTNTITD-FTVGQDMILLDGGLTFEEL 2179
Query: 350 CIDSVN 355
I SV
Sbjct: 2180 TIASVG 2185
Score = 39.4 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 53/218 (24%), Gaps = 32/218 (14%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + ++ + + I+ + G D ++G D+
Sbjct: 1962 QGDDVIVGTEEDDIILAGQGDDIVIAGDRNNLIFGEAGNDTLIGGPGNDTLFGNQGNDLI 2021
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
F G E + ++ + D
Sbjct: 2022 F---------------------------GGSGNDEIYGGQGNDTISGGGGNDLIFGGLGD 2054
Query: 459 APDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
G + F N G + + D +Y G +DL + + + G
Sbjct: 2055 DFIEGNEGNNTLFGNQGNDTIFGGSGDDLIYGGQGNDLIHGGSGNDTL----FGDAGNDT 2110
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ + + LI A + G+D F
Sbjct: 2111 IFGEEGDDLIFGGEGDDILIGAEGNDTLTGGEGRDRFV 2148
>gi|83645550|ref|YP_433985.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
gi|83633593|gb|ABC29560.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
Length = 2074
Score = 83.7 bits (205), Expect = 9e-14, Method: Composition-based stats.
Identities = 58/415 (13%), Positives = 106/415 (25%), Gaps = 60/415 (14%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
I + +DLLD + + G + + + G
Sbjct: 1578 GRGGQDKIVGTYQNDLLDFRGATLLGITEINAGSGDDVVYGTAGADVLVGEIGDDRLYGG 1637
Query: 275 SGNDVVI---GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY---------KIYRFE 322
+G+D I + A + F G DV +G +G D F + +I
Sbjct: 1638 AGDDRFIVRGASQAGDRFDGGEGFDVLEGGAGDDEFNFALVKPGDPASQLVSIERIDGGG 1697
Query: 323 NAIIVYDANEHKQD-----------------FLSDVERLRFADQCIDSVNVKQRSILEYT 365
++ + + + + + + IL
Sbjct: 1698 GRNLIIGSAGYSTTDYLDFSQIELVSVAAINTVGGDDVVIGSQSADVINGGTGEDILRGQ 1757
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A ++LI G D + G D+ DD+ + G D
Sbjct: 1758 AGNDELIGGQGNDELYGEEGNDRLIGGSGDDLMSGDA-----GDDVFILLGGDE------ 1806
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
G F A+ + + D V N G + D
Sbjct: 1807 ----GADRFMGGAGFDAIIGSTENNVVRLPIMKDGDPKSVLDVEQINLGAGTNLILGADG 1862
Query: 486 YL------------YLGSYDDLRNVFGSDRGAAARHYITHGVK--EGRNPDAFKALEYIA 531
Y + +LRN + G+ YI G + R D L
Sbjct: 1863 YNGNDVLDFSSVELIGVARIELRNGADTVIGSLGDDYIDGGFRDDNLRGNDGNDTLIGGR 1922
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
++ L +G D+ G + P + + D + ++
Sbjct: 1923 DNDRLYGDNGVDTLDGGSGDDY--LDGGAGADVYLYAPSGDVDTIADSDDSGQNN 1975
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 75/482 (15%), Positives = 124/482 (25%), Gaps = 112/482 (23%)
Query: 180 CATPMVSDIVAVQKI------YGAPKGSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDL 230
+ + D A+Q Y G G+N + + + + I GG D
Sbjct: 1339 ASANGLVDYSALQWSLTPGTPYTQTDGDDGDNNLQGTDGDDELQGRGGNDLIVGGGGADT 1398
Query: 231 L---------------DLTLIGGVKNYIDL--NTESWSSIGGYEKNMTI----------- 262
+ D LI G Y DL E + I G + +
Sbjct: 1399 IVGGVGADIMLGGKGDDRFLIEGRDIYADLFIGGEGYDRILGGSGDDVVRLSIYGVFAPE 1458
Query: 263 -------------AQHTVIE-------------------SVVGSSGNDVVIGNSANNVFF 290
A + +IE + G G+D++ G++ ++
Sbjct: 1459 YGDEASVEEIDGGAGYNLIEGTEGADRIVLTHTLLKNIARIDGLGGDDLIEGSAGADLIV 1518
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYL-YKIYRFENAIIVYDANEHKQDFLS---DVERLRF 346
G D+ G G D+F A I E + E+ L+ ++E +
Sbjct: 1519 GGPGADILKGGKGDDSFMITAGDADADSIDGGEGIDQILGTPENDLIRLTSVANIEMVDG 1578
Query: 347 ADQCIDSVN----------------------VKQRSILEYTASYEDLIQVIGQDVFESMK 384
V ++ TA + L+ IG D
Sbjct: 1579 RGGQDKIVGTYQNDLLDFRGATLLGITEINAGSGDDVVYGTAGADVLVGEIGDDRLYGGA 1638
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
F + G D + +D L G D A
Sbjct: 1639 GDDRFIVR-GASQAGDRFDGGEGFDVLEGGAGDDEFNFAL------------VKPGDPAS 1685
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ S E + + G + V+ + +G D + +D
Sbjct: 1686 QLVSIERIDGGGGRNLIIGSAGYSTTDYLDFSQIELVSVAAINTVGGDDVVIGSQSADVI 1745
Query: 505 AAARHY----ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
G E L ++ LI D AG D F G +
Sbjct: 1746 NGGTGEDILRGQAGNDELIGGQGNDELYGEEGNDRLIGGSGDDLMSGDAGDDVFILLGGD 1805
Query: 561 EG 562
EG
Sbjct: 1806 EG 1807
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/388 (13%), Positives = 108/388 (27%), Gaps = 45/388 (11%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ V ++ + D + N + EIN D Y GT +
Sbjct: 1568 TSVANIEMVDGRGGQDKIVGTYQNDLLDFRGATLLGITEINAGSGDDVVY----GTAGAD 1623
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
+ EIG L + D + D + +
Sbjct: 1624 VLVGEIG-DDRLYGGAGDDRFIVRGASQAGDRFDGGEGFDVLEGGAGDDEFNFALVKPGD 1682
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
P +V++++I G +L + + + +
Sbjct: 1683 PASQ-LVSIERIDGGGGRNLIIGSAGYSTTDYLDFSQIELVSVAAINTV-------GGDD 1734
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + ++S I G + + ++G GND + G N+ SG+D+ G +
Sbjct: 1735 VVIGSQSADVINGGTGEDILRGQAGNDELIGGQGNDELYGEEGNDRLIGGSGDDLMSGDA 1794
Query: 303 GLDTFFYYAPS-YLYKIYRFENAIIVYDANEHKQDFL-----------SDVERLRFADQC 350
G D F + + + E+ L DVE++
Sbjct: 1795 GDDVFILLGGDEGADRFMGGAGFDAIIGSTENNVVRLPIMKDGDPKSVLDVEQINLGAGT 1854
Query: 351 IDSV---NVKQRSILEYTA-------------SYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ +L++++ + +I +G D + ++G
Sbjct: 1855 NLILGADGYNGNDVLDFSSVELIGVARIELRNGADTVIGSLGDDYIDGGFRDDNLRGNDG 1914
Query: 395 RDITF----DSYLYLGSYDDLRNVFGSD 418
D + LY + D + D
Sbjct: 1915 NDTLIGGRDNDRLYGDNGVDTLDGGSGD 1942
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/278 (16%), Positives = 85/278 (30%), Gaps = 25/278 (8%)
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
V + ++ D I S + + + D G G +
Sbjct: 1723 SVAAIN----TVGGDDVVIGSQS--ADVINGGTGEDILRGQAGNDELIGGQGNDELYGEE 1776
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
+ G G V D M + P
Sbjct: 1777 GNDRLIGGSG----DDLMSGDAGDDVFILLGGDEGADRFMGGAGFDAIIGSTENNVVRLP 1832
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGG-VKN 241
++ D G PK L ++ + D G+D+LD + +
Sbjct: 1833 IMKD--------GDPKSVLD----VEQINLGAGTNLILGADGYNGNDVLDFSSVELIGVA 1880
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
I+L + + I G + I +++ G+ GND +IG N+ + +G D DG
Sbjct: 1881 RIELRNGADTVI-GSLGDDYIDGGFRDDNLRGNDGNDTLIGGRDNDRLYGDNGVDTLDGG 1939
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
SG D A + +Y + + D+++ Q+ L
Sbjct: 1940 SGDDYLDGGAGADVYLYAPSGDVDTIADSDDSGQNNLV 1977
>gi|302038743|ref|YP_003799065.1| hypothetical protein NIDE3454 [Candidatus Nitrospira defluvii]
gi|300606807|emb|CBK43140.1| protein of unknown function, putative Hemolysin-type calcium-binding
protein [Candidatus Nitrospira defluvii]
Length = 2442
Score = 83.7 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/382 (13%), Positives = 96/382 (25%), Gaps = 20/382 (5%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
G + + + D+ G G + + + + G N
Sbjct: 1007 GADDYLDGGAGNDLLVGDGGNDILIGGAGDDLLYGESDFTQTIPGDDWLDGGEGNDRLFG 1066
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
+ ++ F D G + +YG
Sbjct: 1067 GAGADSLSGGDGDDLLIGDFSEDPGSADILDGGAGADELQGGGGDDILYGGIGMDRLAGF 1126
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ GDD +L GG+ + + E + G + N + T
Sbjct: 1127 AG-NDVLDGGADSDELQGGAGDD----SLWGGLGHDLLTGQEGDDELFGDDGNDELHGET 1181
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++++G GND + G ++ +G+DV +G G D + + E +
Sbjct: 1182 GNDTLLGGVGNDALFGQDDDDFLSGDAGDDVLNGGLGNDQL--DGGDGIDDVQGREGDDL 1239
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNV--KQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D +V L+ + L GQD +
Sbjct: 1240 IVGGIGDD---------FLYGDGNNPTVLNLLGGNDTLDGEEGDDQLWGGAGQDQLFGGE 1290
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ G D F + D G G L
Sbjct: 1291 GTDQLVGDVGDDALFGDAGDDSLFGDSPLFAGQAGNDVLD--GGDGNDVLDAGGGEDDLH 1348
Query: 445 YIASHEDLINAFADAPDLVQVG 466
A ++ LI +G
Sbjct: 1349 GGAGNDRLIGGAGSDTYRFNLG 1370
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 65/463 (14%), Positives = 116/463 (25%), Gaps = 27/463 (5%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D+ G ++ + +G G ++ Y
Sbjct: 1887 GGEDVDYLYGNVTNDILSGLGGDDSLYGGAGNDLLDGGIG-------ADGMIGGSGNDLY 1939
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE--- 210
D V + +S Y V ++ + G+ NNI
Sbjct: 1940 TVDEVGDGVTEQAGQGTDTVQSSVTYALGANVENLTLIGNAAINGSGNSLNNILAGNGAV 1999
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
T GD +++ G D S G + T +
Sbjct: 2000 NVLTGGAGNDTYVVGAGDTIVEAAGSGTDIIRAD-----ISWTLGINVENLVLTGTAAVN 2054
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G+S + + GNSA N+ +G D G G DT+ S I N +
Sbjct: 2055 GTGNSLANTLTGNSAANILNGGAGADRLIGGQGDDTYVVDNVSDQ--ITESANEGLDTVQ 2112
Query: 331 NEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ ++VE L I+ +IL ++ L G D +
Sbjct: 2113 SSVTYTLAANVENLTLTGSGSINGTGNGLDNILVGNSAANRLTGGAGNDTYVIGTGDSIV 2172
Query: 390 GLSEG--RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G + L + + + GS + + + + A L A
Sbjct: 2173 ESVNGGIDSVQSSVTHTLAANVENLTLTGSATINGTGNGLNNIL---IGNSAVNTLTGGA 2229
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
++ I D ++ +GS V G+ A
Sbjct: 2230 GNDTYIVGAGDTVVEASNAGTDTVQSAVTWSLGANVENLALVGS----AAVNGTGNTLAN 2285
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
G D + ++ L + G
Sbjct: 2286 VLTGNAGNNALIGGDGNDTMAGERGNDVLNGGTGNDVFQFARG 2328
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/378 (14%), Positives = 110/378 (29%), Gaps = 47/378 (12%)
Query: 34 VLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPR 93
I E + ++ R + S + + E + + N T
Sbjct: 2009 DTYVVGAGDTIVEAAGSGTDIIR---ADISWTLGINVENLVLTGTAAVNGTGNSLANTLT 2065
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+S + AD G G T + N +I
Sbjct: 2066 GNSAANILNGGAGADRLIGGQGDDTYVVDNVSDQIT-----------ESANEGLDTVQSS 2114
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ +V + + ++ + +V + A + GA GN+ Y I
Sbjct: 2115 VTYTLAANVENLTLTGSGSINGTGNGLDNILVGNSAANRLTGGA-----GNDTYVIGTGD 2169
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ +GG D + ++ ++ +N+T+ I + G
Sbjct: 2170 SIVESV-----NGGIDSVQSSVTH--------------TLAANVENLTLTGSATI-NGTG 2209
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ N+++IGNSA N +GND + +G DT + + + +
Sbjct: 2210 NGLNNILIGNSAVNTLTGGAGNDTYIVGAG-DTVVEASNAGTDTVQSA---VTWSLGANV 2265
Query: 334 KQDFLSDVERLRFADQCIDSV--NVKQRSILEYTASYEDLIQVIGQDVFESMKHFY--EF 389
+ L + + +V + L + + G DV +F
Sbjct: 2266 ENLALVGSAAVNGTGNTLANVLTGNAGNNALIGGDGNDTMAGERGNDVLNGGTGNDVFQF 2325
Query: 390 GLSEGRDITFDSYLYLGS 407
+G+D D+
Sbjct: 2326 ARGDGQDTVSDTSGSRDR 2343
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 64/476 (13%), Positives = 113/476 (23%), Gaps = 58/476 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + +GG+D L + G +Y D++ G + N T
Sbjct: 877 SFSDLRDGGAGDDILVGAGGNDYL---VGGSGDDYADVSDG--DIFFGGDGNDIAVTDTE 931
Query: 268 IESVV---GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-- 322
I + SG + G + N+V + G DV G G D + ++
Sbjct: 932 IANYAWTHIGSGTHYIDGGAGNDVLLGALGVDVLLGGEGEDVLRGENRPAGWIAKVYDVD 991
Query: 323 --------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY-------TAS 367
A + D + + L + +L
Sbjct: 992 LIPQSFPMPAFSSALGADDYLDGGAGNDLLVGDGGNDILIGGAGDDLLYGESDFTQTIPG 1051
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ L G D +G D+ + D+ + A
Sbjct: 1052 DDWLDGGEGNDRLFGGAGADSLSGGDGDDLLIGDFSEDPGSADILDGGAG----ADELQG 1107
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE--GRFVTFDS 485
G L A ++ L G D + D
Sbjct: 1108 GGGDDILYGGIGMDRLAGFAGNDVLDGGADSDELQGGAGDDSLWGGLGHDLLTGQEGDDE 1167
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
D+L G+D G D L A + L +
Sbjct: 1168 LFGDDGNDELHGETGNDTLL-----GGVGNDALFGQDDDDFLSGDAGDDVLNGGLGNDQL 1222
Query: 546 LVQAGKDHFSNFGYEEGRSITF-----NPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
G D + EG + + + + N+ G + +
Sbjct: 1223 DGGDGID---DVQGREGDDLIVGGIGDDFLYGDGNNPTVLNLLGGNDTL----------- 1268
Query: 601 EGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYS 656
Q + + L D L+ D D + DS L++
Sbjct: 1269 ---DGEEGDDQLWGGAGQDQLFGGEGTDQLVGDVGDDALFGDAGDDSLFGDSPLFA 1321
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 52/156 (33%), Gaps = 3/156 (1%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + + + + G G D + GN N++ SG D G +G DT+
Sbjct: 587 GSVFRGDHLYGGDGNDHLFGYGGKDYLEGNRGNDILDGGSGADTILGGTGDDTYLVD--D 644
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLI 372
+ + N+ + + S +E L ID + + +IL ++ L
Sbjct: 645 SGDIVREYANSGVDEVRSSVTFTLDSQIEYLTLTGSNAIDGIGNELGNILIGNSAKNVLN 704
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
GQD + G + + +Y
Sbjct: 705 GGDGQDHLVGNEGNDTLIGGAGNSDLLEGGVGFDTY 740
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 53/414 (12%), Positives = 105/414 (25%), Gaps = 79/414 (19%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + T + + G GND + + ++ +GND +G G D + +
Sbjct: 1738 GSDTDDTFYGNDGDNLIRGLGGNDQIRASLGDDTLDGGAGNDFLEGYVGNDIYLFGRGYG 1797
Query: 315 LYKIYRFE----------------NAIIVYDANEHKQD---FLSD--------------- 340
I + + + +++
Sbjct: 1798 QDSIDDQGDSSDVDTLQLLEGVGPGDLTLRATPDFGTGVILTITNTADQLMLGGFFASAS 1857
Query: 341 --VERLRFADQCIDSVNVKQ----------------------RSILEYTASYEDLIQVIG 376
V+ ++FAD I N IL + L G
Sbjct: 1858 LRVDLIKFADGTIWDYNAMLAQTEGVNLVGGEDVDYLYGNVTNDILSGLGGDDSLYGGAG 1917
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D+ + G D+ + +G + G+D ++ Y E
Sbjct: 1918 NDLLDGGIGADGMIGGSGNDLY--TVDEVGDGVTEQAGQGTDTVQSSVTYALGANVENLT 1975
Query: 437 --PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE--------GRFVTFDSY 486
+A + + L A G D + + + D
Sbjct: 1976 LIGNAAINGSGNSLNNILAGNGAVNVLTGGAGNDTYVVGAGDTIVEAAGSGTDIIRADIS 2035
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA---LEYIASHEDLINAFADA 543
LG + + G+ G A L A + LI D
Sbjct: 2036 WTLGINVENLVLTGTAAV------NGTGNSLANTLTGNSAANILNGGAGADRLIGGQGDD 2089
Query: 544 PDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
+V D + E ++ + L + + + GS + + +
Sbjct: 2090 TYVVDNVSDQITESANEGLDTVQSSVTYTLAANVENLTLTGSGSINGTGNGLDN 2143
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 61/549 (11%), Positives = 129/549 (23%), Gaps = 82/549 (14%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI--------------- 119
D G + + AD G G T
Sbjct: 596 YGGDGNDHLFGYGGKDYLEGNRGNDILDGGSGADTILGGTGDDTYLVDDSGDIVREYANS 655
Query: 120 ----------------------LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
NA+ IG+ LG + G+ G D+ +
Sbjct: 656 GVDEVRSSVTFTLDSQIEYLTLTGSNAIDGIGNELGNILIGNSAKNVLNGGDGQDHLVGN 715
Query: 158 FLTSVMSYFMPQDSMMDASFGYCA--------------TPMVSDIVAVQKIYGAPKGSLG 203
+ +++ G+ + + I+ + G
Sbjct: 716 EGNDTLIGGAGNSDLLEGGVGFDTYIYRSGDGVDRIEDSDVQGQIIFDDHLLQGGIRRAG 775
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGD-DLLDLTLIGGVKNYIDLNT----ESWSSIGGYEK 258
+ + ++ + D + L+ + I L + + +
Sbjct: 776 DAANSYTSLDGRTTYMMSGTDLIVNGVLIVNENFQSGQMGIQLRDVSPIPTDTGLPAGPF 835
Query: 259 NMTIAQHTVIESVVGSS-GNDVVIGNSANNVFF---------------ESSGNDVFDGSS 302
+ + E+++ ++ + + GN ++V +G+D+ G+
Sbjct: 836 GHVLEGGSGDETLIATNPYSYAMYGNEGDDVLTSQVPSIHDSFSDLRDGGAGDDILVGAG 895
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D + + + ++ + ++D E +A I +
Sbjct: 896 GNDYLVGGSGDDYADVSDGD----IFFGGDGNDIAVTDTEIANYAWTHI----GSGTHYI 947
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ A + L+ +G DV + + +
Sbjct: 948 DGGAGNDVLLGALGVDVLLGGEGEDVLRGENRPAGWIAKVYDVDLIPQSFPMPAFSSALG 1007
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
A Y+ G I D + G D + F
Sbjct: 1008 ADDYLDGGAGNDLLVGDGGNDILIGGAGDDLLYGESDFTQTIPGDDWLDGGEGNDRLFGG 1067
Query: 483 FDSYLYLGSYDD--LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
+ G D L F D G+A G E + L + L
Sbjct: 1068 AGADSLSGGDGDDLLIGDFSEDPGSADILDGGAGADELQGGGGDDILYGGIGMDRLAGFA 1127
Query: 541 ADAPDLVQA 549
+ A
Sbjct: 1128 GNDVLDGGA 1136
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 44/340 (12%), Positives = 110/340 (32%), Gaps = 16/340 (4%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG-----TILSHNAL 125
+ D + G + I +D +R+ +G G + +
Sbjct: 1326 NDVLDGGDGNDVLDAGGGEDDLHGGAGNDRLIGGAGSDTYRFNLGDGVDSIEDDATQSNR 1385
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
G + V D+ + P + F + ++
Sbjct: 1386 LVFGAGITAESLSLDVAPNDSLVVRVGNSEDAVQIAGFGLNSPSEFHTINQFEFADGTVL 1445
Query: 186 SDIVAVQKIYGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+D + + + G + + S ++ G+D+L GG +
Sbjct: 1446 TDAGLLARGFNLSAPVDGGTMIGTSFADHMQGSQAADWLHGRDGNDVLI----GGEGADV 1501
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
E + G + + + + G +G+D+++ N+ ++ +G+D++ +S
Sbjct: 1502 LEGEEGDDLLDGGAGSDRLYGGAGVNVLRGGAGSDLLVSNAVDDQLLGGTGDDIYHLASV 1561
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
L T A + + I+ +A +V+ A + ++ + + Q +D V + L
Sbjct: 1562 LTTVSEDANAGVDTIHLAPSASLVFQAPDQVENVQILDDFYLESTQRVDLVGNVLDNQLS 1621
Query: 364 Y-----TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
D++ +G + F + + + + G
Sbjct: 1622 GPNQLDGQGGNDILIGVGDNTFLFDRGYGQDIVRMGMQTY 1661
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 58/405 (14%), Positives = 111/405 (27%), Gaps = 49/405 (12%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDL 245
Q ++G G + ++ GG D L D+ G + I
Sbjct: 574 QVLFGDEVGETLDGSVFRGDHLYGGDGNDHLFGYGGKDYLEGNRGNDILDGGSGADTILG 633
Query: 246 NTESWSSIGGYEKN----------------MTIAQHTVIESV----------VGSSGNDV 279
T + + + +T + IE + +G+ ++
Sbjct: 634 GTGDDTYLVDDSGDIVREYANSGVDEVRSSVTFTLDSQIEYLTLTGSNAIDGIGNELGNI 693
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+IGNSA NV G D G+ G DT + + D +
Sbjct: 694 LIGNSAKNVLNGGDGQDHLVGNEGNDTLI-GGAGNSDLLEGGVGFDTYIYRSGDGVDRIE 752
Query: 340 DVER--------------LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D + +R A +S + + ++ +
Sbjct: 753 DSDVQGQIIFDDHLLQGGIRRAGDAANSYTSLDGRTTYMMSGTDLIVNGVLIVNENFQSG 812
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG--VKEGRNPDAFKAL 443
L + I D+ L G + + D A + ++ EG + +
Sbjct: 813 QMGIQLRDVSPIPTDTGLPAGPFGHVLEGGSGDETLIATNPYSYAMYGNEGDDVLTSQVP 872
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
S DL + A LV G + + G + D ++ G + V ++
Sbjct: 873 SIHDSFSDLRDGGAGDDILVGAGGNDYLVGGSGDDYADVSDGDIFFGGDGNDIAVTDTEI 932
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
A +I G L + L+ + +
Sbjct: 933 ANYAWTHIGSGTHYIDGGAGNDVLLGALGVDVLLGGEGEDVLRGE 977
>gi|149913478|ref|ZP_01902011.1| type I secretion target repeat protein [Roseobacter sp. AzwK-3b]
gi|149812598|gb|EDM72427.1| type I secretion target repeat protein [Roseobacter sp. AzwK-3b]
Length = 2341
Score = 83.7 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/422 (13%), Positives = 92/422 (21%), Gaps = 22/422 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ N + D G IL + I G+
Sbjct: 622 TSGTGDDLVYGNAGDDLIYGGDGNDTLRGREDNDTLNGDAGNDNILGEDGDDLISGGTGV 681
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD---------------SMMDASFGY 179
G + + + D + + +
Sbjct: 682 DFLSGDAGNDTIVAASAADGAGDSVFGGAEGALDNDVLDLRGAGPVTITQEADPNDAGAT 741
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
T D + + + + P T T+ G
Sbjct: 742 RGTVTFGDGSTLTFEGIETILRDPDGVVDGADTSQAMPVGFTDAQGDVITENADTIFGNG 801
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ + + G N I +++ G GND + G++ N+ F SG D
Sbjct: 802 GDDTISSGGGDDFVAGGIGNDVIDGGLGNDNLNGDDGNDSLSGDAGNDQLFGGSGFDALS 861
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNV 356
G G D L F +A E DFLS + L +
Sbjct: 862 GGDGDDLL----AGGLDNDTLFGDAGNDDLRGEDGDDFLSGGIGDDFLEGGTGNDNVNGD 917
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
L A + L G D D+ + + F
Sbjct: 918 DGNDDLRGEAGDDQLFGGAGIDTLFGGDGNDLLAGGFDNDVLLGDAGNDDLRGEDGDDFL 977
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
S +G + L A + L + G D E
Sbjct: 978 SGGIGDDFLEGGNGNDTLNGDEGNDDLRGEAGDDQLFGGDGNDTLAGGTGADSLVGGAGE 1037
Query: 477 EG 478
+
Sbjct: 1038 DS 1039
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/414 (13%), Positives = 101/414 (24%), Gaps = 39/414 (9%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + + D +D G G T+ +I
Sbjct: 1761 NDVLDGGAGNDTLDGGADNDAVTGGAGDDSLLGGDGSDTLAGGEGNDTLDGGAGDDDI-- 1818
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
A+G G V+ +D N + ++ D D + G P D
Sbjct: 1819 AVGGGDSAVGGAGDDVFRLDPTDTNPNTQITI-------DGGTDGTDGAPGGPENGDAGD 1871
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ + + G + I + D+ ++ +
Sbjct: 1872 ILDL----SDATGPLDVVFGTNPETG-----IVNGVDGDVFPDVSFSEIEQVVTGAGNDT 1922
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ +A + V+G +GNDV+ + +G+D G DT
Sbjct: 1923 LDASTSNGPINVATGAGDDEVLGGAGNDVIDAGDGADSVDGGAGDDTIGAGLGNDTV--N 1980
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A + ++ + L A +
Sbjct: 1981 AGDGADDVLGGAGEDVLDGGAGNDT-----------------LDGGDDNDSLTGGAGDDS 2023
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA--AARHYIT 428
L+ G+D + G D + D +VF DR A IT
Sbjct: 2024 LLGGAGEDTLAGGEGADVLDGGLGNDALEVGAGDTAAGDAGDDVFTVDRALTGADPITIT 2083
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
G N D D + + + F + G VT
Sbjct: 2084 GGETGETNGDTLDLSGNGPVTLDFDTTDPTFDPVTGRSESGTATFTNDNGDLVT 2137
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 52/466 (11%), Positives = 109/466 (23%), Gaps = 19/466 (4%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D D G G + + + L G + G D D
Sbjct: 834 NGDDGNDSLSGDAGNDQLFGGSGFDALSGGDGDDLLAGGLDNDTLFGDAGNDDLRGEDGD 893
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ + ++ G + + G G+
Sbjct: 894 DFLSGGIGDDFLEGGTGNDNVNGDDGNDDLRGEAGDDQLFGGAGIDTLFGGD----GNDL 949
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ G+D L G + + G N T+ + +
Sbjct: 950 LAGGFDNDVLLGDAGND----DLRGEDGDDFLSGGIGDDFLEGGNGNDTLNGDEGNDDLR 1005
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G+D + G N+ +G D G +G D+F A + ++
Sbjct: 1006 GEAGDDQLFGGDGNDTLAGGTGADSLVGGAGEDSFVLGADDTAGGGDGDDLFLVDPTLPT 1065
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ E +D V +++ + S + +
Sbjct: 1066 GGDATIVGGETGETNGDTLDLRGVGPVTLVY-----DTTDPTFDPATGTSESGRATYTNT 1120
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
G +T + D V + + D + A ++ +
Sbjct: 1121 AGDPVTINFSEIETVLTDPDGVVDGTPSGDNIPVGFTDAQGDQVTDGADTILAGAGNDTI 1180
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARH- 509
D G D + D D + G D
Sbjct: 1181 AAGGGDDSVDAGTGDDFVDAGAGADSVDGGDGNDDLRGGTDNDTILGGAGDDFIDGDAGD 1240
Query: 510 ---YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G + R + ++ A +++++ + D
Sbjct: 1241 DQIFAGDGNDDLRGSEGEDFIDGGAGNDNILGEEDNDDLRGGDDVD 1286
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 60/482 (12%), Positives = 115/482 (23%), Gaps = 42/482 (8%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D + D D G G ++ + + G G +D
Sbjct: 1578 GDEGNDILFGGDGNDSLEGGDGADSLAGNAGADTLLGGDGDDVIAVGGRDVATGGAGDDV 1637
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPM---VSDIVAVQKIYGAPKGSLGNNIYKIE 210
+ D DA+ G P DI+ + + G N
Sbjct: 1638 FIFDTTDPEPNVQATIDGGSDATDGAPGGPENGDAGDILDLSAVTGPLDVVFDPNPESGA 1697
Query: 211 VQQKDSPFI--------QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
V D + + G+D LD + G + S+ N ++
Sbjct: 1698 VDGLDGDVFPDLAFSEIEQVITGAGNDTLDASTSTGPVDIE--AGAGDDSVTAGAGNDSV 1755
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G +GND + G + N+ +G+D G G DT +
Sbjct: 1756 LGDAGNDVLDGGAGNDTLDGGADNDAVTGGAGDDSLLGGDGSDTL--AGGEGNDTLDGGA 1813
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCID-------SVNVKQRSILEY----TASYEDL 371
+ + + R + + + L
Sbjct: 1814 GDDDIAVGGGDSAVGGAGDDVFRLDPTDTNPNTQITIDGGTDGTDGAPGGPENGDAGDIL 1873
Query: 372 IQVIGQDVFESMKHFY-EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ + E G+ G D + + + G+D ++G
Sbjct: 1874 DLSDATGPLDVVFGTNPETGIVNGVDGDVFPDVSFSEIEQVVTGAGNDT---LDASTSNG 1930
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+ A ++ + G D + + LG
Sbjct: 1931 PINVATGAGDDEVLGGAGNDVIDAGDGADSVDGGAGDDTIGAGLGNDTVNAGDGADDVLG 1990
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+ G+ G D +L A + L+ + G
Sbjct: 1991 GAGEDVLDGGA------------GNDTLDGGDDNDSLTGGAGDDSLLGGAGEDTLAGGEG 2038
Query: 551 KD 552
D
Sbjct: 2039 AD 2040
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 65/497 (13%), Positives = 123/497 (24%), Gaps = 25/497 (5%)
Query: 68 LTFEETSI--HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ F E + P + + D AD G G TI +
Sbjct: 1127 INFSEIETVLTDPDGVVDGTPSGDNIPVGFTDAQGDQVTDGADTILAGAGNDTIAAGGGD 1186
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+ G + G VD ND + + + D G +
Sbjct: 1187 DSVDAGTG---DDFVDAGAGADSVDGGDGNDDLRGGTDNDTILGGAGDDFIDGDAGDDQI 1243
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ G+ G + + + D G D +D+ G +++D
Sbjct: 1244 FAGDGNDDLRGSE----GEDFIDGGAGNDNILGEEDNDDLRGGDDVDMLFGGTGDDFLD- 1298
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G + N + + + G +GND ++G ++ G D DG G D
Sbjct: 1299 GDAGDDMVFGGDGNDDMRGSEGNDLLDGGAGNDTLLGEEGSDTLTGGEGADSLDGGLGDD 1358
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR-----FADQCIDSVNVKQRS 360
A + + + E D +++
Sbjct: 1359 NLVVGAGDIATGGDGDDVFTVDPMLTGSDPITVVGGETGEDLTDPTNGGAGDVLDLTGLD 1418
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD---SYLYLGSYDDLRNVFGS 417
++ T D V ES + + + F + ++ D + +
Sbjct: 1419 VVSVTYDNTDPTFDPVTGVGESGTVVFNNDAGDPVTLNFSEIETVIFDPLADGVVDGTAG 1478
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D G + ++ A ++ + D G D +
Sbjct: 1479 DDALPIGFTDAQGDQIDGADGDNDVIDAGAGNDSVAAGLGDDTVTAGTGDDVVDGGAGND 1538
Query: 478 --GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
D D + G D G + L ++
Sbjct: 1539 VISGDAGNDDLAGAAGNDQISGGTGDDFI-----VGELGDDSLFGDEGNDILFGGDGNDS 1593
Query: 536 LINAFADAPDLVQAGKD 552
L AG D
Sbjct: 1594 LEGGDGADSLAGNAGAD 1610
Score = 62.5 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 54/374 (14%), Positives = 108/374 (28%), Gaps = 14/374 (3%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G + + + + D ++D + G A P+ +I GA
Sbjct: 1438 GESGTVVFNNDAGDPVTLNFSEIETVIFDPLADGVVDGTAGDDALPIGFTDAQGDQIDGA 1497
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + T+ GDD++D GG N + + G
Sbjct: 1498 DGDNDVIDAGAGNDSVAAGLGDDTVTAGTGDDVVD----GGAGNDVISGDAGNDDLAGAA 1553
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N I+ T + +VG G+D + G+ N++ F GND +G G D+ +
Sbjct: 1554 GNDQISGGTGDDFIVGELGDDSLFGDEGNDILFGGDGNDSLEGGDGADSL--AGNAGADT 1611
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + ++ + + F ++ ++ + D G
Sbjct: 1612 LLGGDGDDVIAVGGRDVATGGAGDDVFIF---DTTDPEPNVQATIDGGSDATDGAPG-GP 1667
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
+ ++ ++ D+ FD G+ D L D + + G
Sbjct: 1668 ENGDAGDILDLSAVTGPLDVVFDPNPESGAVDGLDGDVFPDLAFSEIEQVITGAGNDTLD 1727
Query: 438 DAFKALE----YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+ A + + + L G D + D+ G
Sbjct: 1728 ASTSTGPVDIEAGAGDDSVTAGAGNDSVLGDAGNDVLDGGAGNDTLDGGADNDAVTGGAG 1787
Query: 494 DLRNVFGSDRGAAA 507
D + G A
Sbjct: 1788 DDSLLGGDGSDTLA 1801
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 49/381 (12%), Positives = 82/381 (21%), Gaps = 63/381 (16%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L+ L N + + G + I +++ G ND + G++ N+
Sbjct: 608 LEAALTANAGNDTITSGTGDDLVYGNAGDDLIYGGDGNDTLRGREDNDTLNGDAGNDNIL 667
Query: 291 ESSGNDVFDGS---------SGLDTFFYYAPSYLYKIYRFENAIIVYDA----------- 330
G+D+ G +G DT + + F A D
Sbjct: 668 GEDGDDLISGGTGVDFLSGDAGNDTIVAASAADGAGDSVFGGAEGALDNDVLDLRGAGPV 727
Query: 331 --------------------NEHKQDFLSDVERLR-------------------FADQCI 351
+ +E + F D
Sbjct: 728 TITQEADPNDAGATRGTVTFGDGSTLTFEGIETILRDPDGVVDGADTSQAMPVGFTDAQG 787
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
D + +I + + G D G D D
Sbjct: 788 DVITENADTIF-GNGGDDTISSGGGDDFVAGGIGNDVIDGGLGNDNLNGDDGNDSLSGDA 846
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
N G L A ++DL D +G D
Sbjct: 847 GNDQLFGGSGFDALSGGDGDDLLAGGLDNDTLFGDAGNDDLRGEDGDDFLSGGIGDDFLE 906
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
+ + G D + G+ + G L A
Sbjct: 907 GGTGNDNVNGDDGNDDLRGEAGDDQLFGGAGIDTL---FGGDGNDLLAGGFDNDVLLGDA 963
Query: 532 SHEDLINAFADAPDLVQAGKD 552
++DL D G D
Sbjct: 964 GNDDLRGEDGDDFLSGGIGDD 984
Score = 39.0 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 38/303 (12%), Positives = 76/303 (25%), Gaps = 18/303 (5%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-ENAII 326
I++ + ++ ND + G + ++ G D G G DT F +++ F +
Sbjct: 380 IDAALEATSNDGLDGGAGEDLLVGGVGGDNIVGGDGNDTIFGDNGDSGTRVFGFETPPNL 439
Query: 327 VYDANEHKQDFLSDVERLRFADQ------------CIDSVNVKQRSILEYTASYEDLIQV 374
+Y+ + D L D I+ N Q + + + L
Sbjct: 440 IYNGSFENFDGLRQTPTGFAGDGAIAGWITVEPNQAIEIFNFNQETPVTGSDGDFALDMG 499
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
+ E ++FD D + + G
Sbjct: 500 ASPGNITIFQDVQNLVAGETYRLSFDLSDSANLVDTGPGSNEIEVFFGNQSLGVFNPDNG 559
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+F + + N ++ L + +D
Sbjct: 560 VGFQSFSVDVVAGAGDGSDRLQFVGLGTEDNIGVGLDNVQLVPTSEAGLEAALTANAGND 619
Query: 495 LRNVFGSD-----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D Y G R + L A +++++ D
Sbjct: 620 TITSGTGDDLVYGNAGDDLIYGGDGNDTLRGREDNDTLNGDAGNDNILGEDGDDLISGGT 679
Query: 550 GKD 552
G D
Sbjct: 680 GVD 682
>gi|254804468|ref|YP_003082689.1| putative RTX-family exoprotein [Neisseria meningitidis alpha14]
gi|254668010|emb|CBA04368.1| putative RTX-family exoprotein [Neisseria meningitidis alpha14]
Length = 1902
Score = 83.7 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 58/449 (12%), Positives = 118/449 (26%), Gaps = 48/449 (10%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 738 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 797
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 798 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 857
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 858 VLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 913
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + + + G GND + G N+ +GND +G SG
Sbjct: 914 IYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 973
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 974 SDTYVFGEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVT 1033
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
V ++ ++ + F + + V ++ + + T + L +
Sbjct: 1034 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGD 1093
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
++G D+ Y N Y +G + L
Sbjct: 1094 DYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGE 1153
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGC 475
++ LI + G D +
Sbjct: 1154 DGNDTLIGGAGNDYLEGGSGSDTYVFGEG 1182
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 61/470 (12%), Positives = 114/470 (24%), Gaps = 84/470 (17%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ D D G G + + G
Sbjct: 1124 DGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEGF 1183
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-----------MMDASFGYCATP 183
YN Y D D ++++ + + S+
Sbjct: 1184 GQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGS 1243
Query: 184 MVSDIVAVQKIYGA------------PKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDD 229
I + G + +Y + +Y + GDD
Sbjct: 1244 GAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDD 1303
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LL+ G N + ++ G E N + + + + G GND + G N+
Sbjct: 1304 LLN----GDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTL 1359
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE--------------------------- 322
+GND +G SG DT+ + +Y ++
Sbjct: 1360 IGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGN 1419
Query: 323 ----------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQRSILE 363
+ V ++ ++ + F + + V + L
Sbjct: 1420 HLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLY 1479
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
S L +G D G D +Y G+ +D N +
Sbjct: 1480 AYQSGNTLNGGLGDDYLYGADGDDLLNGDAGND-----SIYSGNGNDTLNGGEGNDAL-- 1532
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
Y +G + L ++ LI + G D +
Sbjct: 1533 --YGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 1580
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 73/550 (13%), Positives = 136/550 (24%), Gaps = 83/550 (15%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D+ + + D G G + +N + G H +G + G +
Sbjct: 1306 NGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGN 1365
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI--- 209
+ S +Y + D + Y DI ++ G L
Sbjct: 1366 DYLEGGSGSD-TYVFGKGFGQDTVYNYDYATGRKDI--IRFTDGITADMLTFTREGNHLL 1422
Query: 210 ----EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + + D G +D +D+ T + + + +
Sbjct: 1423 IKAKDDSGQVTVQSYFQNDGSGAYRIDEIHF-DNGKVLDVATVKELVQQSTDGSDRLYAY 1481
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++ G G+D + G +++ +GND +G DT +Y +
Sbjct: 1482 QSGNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTL--NGGEGNDALYGYNGND 1539
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
++ + L + LI G D E
Sbjct: 1540 VL--------------------------NGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 1573
Query: 386 FYE--FGLSEGRDITFDSYLYLGS---------------------YDDLRNVFGSDRGAA 422
FG G+D ++ G L
Sbjct: 1574 SDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 1633
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ Y + D + + + G
Sbjct: 1634 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLG- 1692
Query: 483 FDSYLYLGSYDDLR--------------NVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
D YLY +DL N + Y +G + L
Sbjct: 1693 -DDYLYGADGNDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLN 1751
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRS 588
++ LI + +G D + FG G+ +N ++ D + G
Sbjct: 1752 GEDGNDTLIGGAGNDYLEGGSGSDTYV-FGKGFGQDTVYN--YHVDKNSDTMHFKG--FK 1806
Query: 589 AAAQHYITHG 598
AA H+I G
Sbjct: 1807 AADVHFIRSG 1816
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 60/483 (12%), Positives = 110/483 (22%), Gaps = 54/483 (11%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D+ + + D G G + +N + G H +G + G +
Sbjct: 906 NGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGN 965
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ S +Y + D + Y DI+ + + G +
Sbjct: 966 DYLEGGSGSD-TYVFGEGFGQDTVYNYDYATGRKDII---------RFTDGITADMLTFT 1015
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
++ + + D G + I +
Sbjct: 1016 REGNHLLIKAKDDSGQVTVQSYFQNDGS-----GAYRIDEIHFDNGKVLDVATVKKLVQQ 1070
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ G+D + + N G+D G+ G D + IY +
Sbjct: 1071 STDGSDRLYAYQSGNTLNGGLGDDYLYGADGDD--LLNGDAGNDSIYSGNGNDTL----- 1123
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D + L + + L + LI G D E +
Sbjct: 1124 ---DGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 1180
Query: 393 E--GRDITFDSYLYLGS---------------------YDDLRNVFGSDRGAAARHYITH 429
E G+D ++ G L + Y +
Sbjct: 1181 EGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQN 1240
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
D + + + G D YLY
Sbjct: 1241 DGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLG--DDYLYG 1298
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
DDL N Y +G + AL ++ L + +
Sbjct: 1299 ADGDDLLN----GDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGED 1354
Query: 550 GKD 552
G D
Sbjct: 1355 GND 1357
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/253 (15%), Positives = 78/253 (30%), Gaps = 11/253 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + T + +D + +G G G +N + G +
Sbjct: 1543 GGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 1602
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-----IVA 190
+ + ++ + D S Y + D VA
Sbjct: 1603 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 1662
Query: 191 VQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
K + +Y + +Y + G+DLL+ G N +
Sbjct: 1663 TVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGNDLLN----GDAGNDSIYSGN 1718
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G E N + + +++ G GND + G N+ +GND +G SG DT+
Sbjct: 1719 GNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV 1778
Query: 309 YYAPSYLYKIYRF 321
+ +Y +
Sbjct: 1779 FGKGFGQDTVYNY 1791
>gi|119489543|ref|ZP_01622304.1| Hemolysin-type calcium-binding toxin [Lyngbya sp. PCC 8106]
gi|119454622|gb|EAW35769.1| Hemolysin-type calcium-binding toxin [Lyngbya sp. PCC 8106]
Length = 801
Score = 83.7 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 80/261 (30%), Gaps = 17/261 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ S + I + +DL+ GG + L + ++ G N +I
Sbjct: 43 GGNDTVQGSSDPEFIRGNLDNDLI----RGGDGDDTLLGGQGIDNLLGESGNDSIFGERD 98
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS-------YLYKIYR 320
+ + G+ G D G N+ GNDVF G G+DT + +
Sbjct: 99 NDILFGNLGEDTFFGGQGNDEANGGQGNDVFFGGEGVDTLNGDSGDDLIQGEKGTDILLG 158
Query: 321 FENAIIVYDANEHKQDFLSDVER-LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
I+ + + E +R V + ++ + ++ G D
Sbjct: 159 GLGNDIILGGADADRISGEAGEDVIRGEQDSDFLVGGEDNDLILGGTGDDRVLGEAGDDR 218
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF-----GSDRGAAARHYITHGVKEG 434
K EG DI F G+ + N G D A + + +
Sbjct: 219 LYGDKGRDTLIGGEGNDIFFIEPGTGGNSPEDANFIFDFQLGIDTIALVGDFPFNSLNIT 278
Query: 435 RNPDAFKALEYIASHEDLINA 455
+P A++ + +
Sbjct: 279 EDPRDSNNTLIQAANGEYLAV 299
Score = 38.2 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 24/200 (12%), Positives = 44/200 (22%), Gaps = 18/200 (9%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
++ + L+ G D DI F + D
Sbjct: 59 GNLDNDLIRGGDGDDTLLGGQGIDNLLGESGNDSIFGERDNDILFGNLG----EDTFFGG 114
Query: 415 FGSDRGAAARHYITHGVKEGR---NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
G+D + EG N D+ L D++ ++
Sbjct: 115 QGNDEANGGQGNDVFFGGEGVDTLNGDSGDDLIQGEKGTDILLGGLGNDIILGGADADRI 174
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
+ E +L +D + G G L
Sbjct: 175 SGEAGEDVIRGEQDSDFLVGGEDNDLILGG-----------TGDDRVLGEAGDDRLYGDK 223
Query: 532 SHEDLINAFADAPDLVQAGK 551
+ LI + ++ G
Sbjct: 224 GRDTLIGGEGNDIFFIEPGT 243
>gi|288959972|ref|YP_003450312.1| calcium binding hemolysin protein [Azospirillum sp. B510]
gi|288912280|dbj|BAI73768.1| calcium binding hemolysin protein [Azospirillum sp. B510]
Length = 6551
Score = 83.7 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 57/465 (12%), Positives = 105/465 (22%), Gaps = 36/465 (7%)
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
+ G+G ++ + G +G +
Sbjct: 870 GGGNDALAGDGGDNRLSGGVGDDSLSGGAGDDVLDGGSGADRLDGGDGIDTATYAGSGAG 929
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK 214
L + + + D + G G+++
Sbjct: 930 VTVDLAVGTGTGGDAEGDVLSGVENLIGSAHGDRLTGDAGANHLDGGAGDDV------LA 983
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG---YEKNMTIAQHTVIESV 271
+ T+ G D D + G + + + +
Sbjct: 984 GAGGADTLIGGEGIDTADYSTSGAGVAVDLASGGGAGGDAEGDVLSGVENLTGSAHGDRL 1043
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G +G + + G + ++ G D G G+DT Y A + +
Sbjct: 1044 TGDAGANRLDGGAGDDTLAGGQGADTLIGGDGIDTADYSASAGGVSVDLSAGTAA---GG 1100
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ + D LS +E L +D V ++L+ + LI + G D
Sbjct: 1101 DAEGDVLSGIENLTGSDGDDRLVGDAGANLLDGRGGNDTLIGLGGADTLIGGDGTDL--- 1157
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
D G EG + + A +
Sbjct: 1158 -----------------ADYSASADGVGVDLTAGSGAGGDAEGDALSGVEDVTGSAFADR 1200
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDL-RNVFGSDRGAAAR 508
L A G D + G + D Y S + ++
Sbjct: 1201 LTGAQTANRLDGGAGDDRLAGLGGADTLIGGAGIDLADYSASGAGVTVDLAAGAGTGGDA 1260
Query: 509 HYITHGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQAGKD 552
E AF L + L D G D
Sbjct: 1261 EGDVLSGVENLTGSAFADRLTGDSGSNVLEGGAGDDTLAGGQGAD 1305
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 62/491 (12%), Positives = 113/491 (23%), Gaps = 27/491 (5%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + + + D G +L ++ LG
Sbjct: 1085 AGGVSVDLSAGTAAGGDAEGDVLSGIENLTGSDGDDRLVGDAGANLLDGRGGNDTLIGLG 1144
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G + + + S S T +
Sbjct: 1145 GADTLIGGDGTDLADYSASADGVGVDLTAGSGAGGDAEGDALSGVEDVTGSAF----ADR 1200
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+ GA + + + + T+ G DL D + G +DL + +
Sbjct: 1201 LTGAQTANRLDGGAG-DDRLAGLGGADTLIGGAGIDLADYS-ASGAGVTVDLAAGAGTGG 1258
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ + +E++ GS+ D + G+S +NV +G+D G G DT +
Sbjct: 1259 DAEGDVL-----SGVENLTGSAFADRLTGDSGSNVLEGGAGDDTLAGGQGADTLIGGDGA 1313
Query: 314 YLYKIYRFENAIIVY------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+IV + + D L+ +E + + + LE A
Sbjct: 1314 DSADYAASAGGVIVDLAAGTGVGGDAEGDLLTGIENVTGSAHDDGLTGDGGANRLEGGAG 1373
Query: 368 YEDLIQVIGQDVFESMKH---FYEFGLSEGRDITFDS---YLYLGSYDDLRNVFGSDRGA 421
+ L G D G S G D+ + D L V
Sbjct: 1374 DDWLSGGTGADSLIGGDGIDSADYAGSSAGIDVDLSTGRGAGGDAEGDVLSGVENLGGSD 1433
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ D + + G
Sbjct: 1434 HDDRLTGDAYANRLDGRGGNDTLVGLGGADTLVGGDGIDTAEYLASTAAVTVNLASGTGS 1493
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
D+ S + + R G L A + LI
Sbjct: 1494 GGDAQGDRLSGIENL----TGSAFGDRLIGDAGANILDGAGGNDTLVGGAGADTLIGGAG 1549
Query: 542 DAPDLVQAGKD 552
A
Sbjct: 1550 SDTADYSASAS 1560
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 68/255 (26%), Gaps = 14/255 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+ G D D + + +
Sbjct: 1530 GGNDTLVGGAGADTLIGGAGSDTADYSASASAVTVDLAAGTGLGGTAAGDVLI------G 1583
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E+++GSS D ++G+ +N +G D G G DT Y + + +
Sbjct: 1584 VENLIGSSRADRLVGDGQDNSLRGGAGADTLIGGDGSDTADYTGSAAGVTVSLADGTA-- 1641
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D + D LS +E L + + L + LI G D
Sbjct: 1642 -DGGDATGDVLSGIENLTGSGAADRLTGDGGANRLRGGGGNDTLIGGAGADSLSGGAGLD 1700
Query: 388 E-FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
+ ++ + +G D DR + I G+ + D
Sbjct: 1701 TADYSASAGAVSVNLATGIGRGGDA----EGDRLDGVENLIGTGLADSLTGDGAANYLDG 1756
Query: 447 ASHEDLINAFADAPD 461
D + A
Sbjct: 1757 RGGADSLAGGAGDDT 1771
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 67/495 (13%), Positives = 126/495 (25%), Gaps = 48/495 (9%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ T S + DV RYG G+ TI + + +GL
Sbjct: 4052 GGEGDDSLRGGDGADTLEGGSGTNSILTGLGDDVIRYGGGRDTITNEGGRDVLEIRIGLK 4111
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ + +G D ++ + + AS+ V +
Sbjct: 4112 ---REDLYFARFGNDLYLRFRDAGDEIVLTNRFKGAGDGASYVQRILFADGREVDLTDPA 4168
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ + + I GG D + ++ G
Sbjct: 4169 LKLETLAHD----WAETLEGYNVGDLIQGLGGKDTIY-------------GYAGDDTLDG 4211
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ +I + +S++G +G+D + G N++ GND G +G DT
Sbjct: 4212 GAGSDSILGGSGDDSLIGGAGDDQLEGEDGNDLLLGGDGNDSIIGGAGNDTLL--GGQGA 4269
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDV----------------ERLRFADQCIDSVNVKQR 359
++Y ++ + ++ +V E D
Sbjct: 4270 DQLYGGAGDDLIDNRDDTGAGASRNVAYGEAGDDTILGGDAGETFSGGDGNDRVEGNGGN 4329
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG-RDITFDSYLYLGSYDDLRNVFGSD 418
LE A + L+ G D + G I + Y R+ ++
Sbjct: 4330 DWLEGNAGNDSLLGGEGDDSLQGGDGADTLEGGSGTNSILTGLGDDVIRYSGGRDTITNE 4389
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIA-SHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
G+ T +E F Y+ + + G + +
Sbjct: 4390 GGSDVLEIRTGLKREDLYFARFGNDLYLRFRNAADEIVLTNRFKGAGDGASYVQRILFAD 4449
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
GR V D Y + +G + A + L
Sbjct: 4450 GREVDLTDPALKLE------TLAHDWAETLEGYNVGDLIQG--LGGNDIIYGYAGDDTLD 4501
Query: 538 NAFADAPDLVQAGKD 552
AG D
Sbjct: 4502 GGAGGDAVYGGAGAD 4516
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 55/356 (15%), Positives = 95/356 (26%), Gaps = 28/356 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
YK + T+Y GDDLL GG I E S+ G N ++
Sbjct: 5124 YKANDSIDGAGGNDTLYGYAGDDLLT----GGAGADILDGGEGSDSLSGGTGNDSLIGGA 5179
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++++G G D + G + +GND G +G DT + I
Sbjct: 5180 GNDTLIGGDGADTLSGGEGADSLSGGAGNDSLLGGAGNDTLA-GGDGANSINGGTGDDTI 5238
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSV-----NVKQRSILEYTASYEDLIQVIGQDVFE 381
+Y+ + L F D + ++ A +I E
Sbjct: 5239 LYEGGADTIGGGGGGDELVFGDGYAKDGLRLERFGTELHLVFDDAGKRIVIANRFNGNGE 5298
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ ++G + + D + A +G +
Sbjct: 5299 GTDYVRTLRFADGDTVDLSRRDLMILTRDGDAGHVLEGYNAGDVIRGNGGTDAIYGYGGD 5358
Query: 442 ALEYIASHEDLINAFADAPD-----LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
Y D + G + G + R + + LY G DD+
Sbjct: 5359 DTLYGGDGVDTLYGGDGDDLIDSRDETVSGDMAYGEAGDDTIRGGSANDALYGGDGDDVI 5418
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G +L A + L+ + AG +
Sbjct: 5419 E-------------GNAGNDSIEGNAGNDSLSGGAGADTLMGGDGNDTLGGGAGAN 5461
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 75/276 (27%), Gaps = 7/276 (2%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + + T+Y GDDL+D + +I G N +
Sbjct: 5355 YGGDDTLYGGDGVDTLYGGDGDDLIDSRDETVSGDM-AYGEAGDDTIRGGSANDALYGGD 5413
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN--- 323
+ + G++GND + GN+ N+ +G D G G DT A + ++
Sbjct: 5414 GDDVIEGNAGNDSIEGNAGNDSLSGGAGADTLMGGDGNDTLGGGAGANWIDTGVGDDLVL 5473
Query: 324 --AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D LS D + + +
Sbjct: 5474 YQGGADTVVGGGGNDTLSVGAGYSRDDLRFERYGADLHLRFNGKPDRIVIANRF-NGAGD 5532
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+K+ +GR + + D + AA+ G +
Sbjct: 5533 GVKYLQTLLFDDGRTVDLTDPALIIDTWDDAADHKLEGYAASDTIRGGGGNDSLYGYGGD 5592
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
Y + DL+ A L ++ E
Sbjct: 5593 DSLYGGAGSDLVYGGAGNDLLDSGDDQTGNDTLFGE 5628
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 62/369 (16%), Positives = 96/369 (26%), Gaps = 28/369 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+Y GDDLLD L GG + L + ++ G + I
Sbjct: 625 TGNDSLHGGSGADLLYGGMGDDLLDGGTDANRLYGGSGDDTLLGGDVGDTLDGGSGDDVI 684
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+S+ G SG+D + G ++ SGND G G D L
Sbjct: 685 NGGIGADSIRGGSGDDRIDGGENDDSIDGGSGNDTILGGGGRDVVMAGDGDDLVSDGDDV 744
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS-------------ILEYTASYE 369
+ +D + + L +
Sbjct: 745 WSDDRFDGGAGNDTLDGGLGSDTLIGGAGNDRLSVGNDYNGDYLDGGDGDDTLIGGMGAD 804
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF------GSDRGAAA 423
LI G DV + +G DI S DLR +DR +
Sbjct: 805 TLIGGAGDDVLKGGGGNNVLIGGDGIDIADYSAETEAISIDLRTGELRHGGWMADRLSGI 864
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ G + D +D ++ A L + G +
Sbjct: 865 ETILAGGGNDALAGDGGDNRLSGGVGDDSLSGGAGDDVLDGGSGADRLDGG----DGIDT 920
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
+Y G+ + G+ G A + GV+ L A L D
Sbjct: 921 ATYAGSGAGVTVDLAVGTGTGGDAEGDVLSGVENLIGSAHGDRLTGDAGANHLDGGAGDD 980
Query: 544 PDLVQAGKD 552
G D
Sbjct: 981 VLAGAGGAD 989
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/529 (11%), Positives = 117/529 (22%), Gaps = 91/529 (17%)
Query: 57 WALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK 116
+ W D E T R + D G G
Sbjct: 5555 LIIDTWDDAADHKLE-------------GYAASDTIRGGGGNDSLYGYGGDDSLYGGAGS 5601
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
+ L G ++G D D DS + + D
Sbjct: 5602 DLVYGGAGNDL------LDSGDDQTGNDTLFGEDGD---DSLRGGGGGDSLYGGTGQDTL 5652
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD---- 232
G T+ G D L+
Sbjct: 5653 DGGA----------------------------GNDTLWGGDGDDTLSGGDGADRLNGEAG 5684
Query: 233 -LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
TL GG ++ G + T+ +++ G +GND++ G++ ++
Sbjct: 5685 DDTLDGGDGADFLWGGAGNDALDGGAGDDTLTGDLGNDTLSGGAGNDILSGDAGDDTLDG 5744
Query: 292 SSGNDVFDGSSGLDTF----------------FYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+GND G G+D+ + + + ++ +
Sbjct: 5745 GTGNDALSGGDGIDSLSGGDGDDTLDGGAGNDLLLGEAGQDSLRGGDGDDVILGGAGNDI 5804
Query: 336 DFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE---FGL 391
+ + +R D ++ Y + + G D F +
Sbjct: 5805 LLGDAGNDTIRGGDGDDAIDGGAGDDLVIYDGGRDTVRGGGGNDTLLFGDGFAADQLYFA 5864
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH-----------GVKEGRNPDAF 440
++ G G+A + ++
Sbjct: 5865 RLDNNLVLRFRDRAEQVVIANRFNGVGEGSAYLRTVRFQDGTEVLLSNPALRLESTGGEG 5924
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
+ + DLI+ L + D G D L S D+
Sbjct: 5925 ADMLVGYVNGDLIDGRGGNDTLSGLRGDDTLIGGTGRDELHGGDGDDLLDSRADVAGSGD 5984
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D Y G L + ++ + A
Sbjct: 5985 YDVA-----YGEAGNDTLLGGGGNDNLSGGSGNDVIDGGDGADMLAGGA 6028
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/361 (12%), Positives = 83/361 (22%), Gaps = 82/361 (22%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + +Y GDD L + +L G + + G + N +
Sbjct: 3724 TGDDSAEGGDGADALYGDVGDDTLSGGAGNDSLYGEAGADSLSGGDGADFLSGGDGNDGL 3783
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD----------------- 305
A +++ G +GND++ G +++ G+D G G D
Sbjct: 3784 AGGAGADTLEGGAGNDLLEGGDGDDILKGGDGDDTLVGGGGTDRLFTGAGNDTIRFDGGR 3843
Query: 306 ----------TFFYYAPSYLYKIY-------------RFENAIIVYDANEHKQDFLSDVE 342
T ++Y + +++ + + D S V+
Sbjct: 3844 ETITNEGGFDTLVIGGGLTKAEMYYARFGNDLYLRFRNRGDEVVLTGRFKGEGDGASYVQ 3903
Query: 343 RLRFAD-------------------------------------QCIDSVNVKQRSILEYT 365
R+ FAD +L+
Sbjct: 3904 RVLFADGQEADLTDPSLVLETVATDGPETLEGYHANDTISGLGGADAIFGYGGDDVLDGG 3963
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A + L +G D +G D Y N G
Sbjct: 3964 AGNDTLFGGLGNDRLIGGSGADRLEGGDGDDTLEGGDDADLHYGGAGNDVIGGGGGGDYM 4023
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
G L A ++ L+ D G D
Sbjct: 4024 EGGDGDDSLSGDAGNDTLYGDAGNDSLLGGEGDDSLRGGDGADTLEGGSGTNSILTGLGD 4083
Query: 486 Y 486
Sbjct: 4084 D 4084
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/333 (14%), Positives = 71/333 (21%), Gaps = 72/333 (21%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLT-----------LIGGVKNYIDLNTESWSSIGGYE 257
++ GDDL+D GG N G
Sbjct: 4905 GNDTILGGTGSDEMHGGAGDDLIDNRDDPNAGGINDVSYGGSGNDTIYGGGGTDVAYGGT 4964
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N I + + G G D V+G + + + +G+D DG G DT A L +
Sbjct: 4965 GNDLIDGGGGTDYLYGEDGADSVLGGAGADYLYGQAGDDTLDGGIGNDTIDGGAGDDLIR 5024
Query: 318 IYRFENAIIVYDANEHKQ------------------------------------------ 335
E +
Sbjct: 5025 FTAGEGIDSITGGGGADVLELGAGLKREQMYLSRIGTDLHLNFRDTGDRIILAGRFSGEG 5084
Query: 336 DFLSDVERLRFADQCIDSV-------------------NVKQRSILEYTASYEDLIQVIG 376
D + V+ +RFAD + K ++ + L G
Sbjct: 5085 DGANFVQTVRFADGSRVDLSAQTIVMETHGQETAEVLFGYKANDSIDGAGGNDTLYGYAG 5144
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D+ EG D N A G
Sbjct: 5145 DDLLTGGAGADILDGGEGSDSLSGGTGNDSLIGGAGNDTLIGGDGADTLSGGEGADSLSG 5204
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+L A ++ L G D
Sbjct: 5205 GAGNDSLLGGAGNDTLAGGDGANSINGGTGDDT 5237
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/352 (14%), Positives = 86/352 (24%), Gaps = 38/352 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG- 133
D + N + ++ AD G G T+ + I +G
Sbjct: 5410 YGGDGDDVIEGNAGNDSIEGNAGNDSLSGGAGADTLMGGDGNDTLGGGAGANWIDTGVGD 5469
Query: 134 -------LMHPGSYNGGYPVYGVDNDYENDSFLTSV--------------MSYFMPQDSM 172
GG V Y D + +
Sbjct: 5470 DLVLYQGGADTVVGGGGNDTLSVGAGYSRDDLRFERYGADLHLRFNGKPDRIVIANRFNG 5529
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI-------YKIEVQQKDSPFIQTIYDS 225
Y T + D V A ++ Y + ++Y
Sbjct: 5530 AGDGVKYLQTLLFDDGRTVDLTDPALIIDTWDDAADHKLEGYAASDTIRGGGGNDSLYGY 5589
Query: 226 GGDDLL------DLTLIGGVKNYIDLNT--ESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
GGDD L DL G + +D ++ G + + ++ +S+ G +G
Sbjct: 5590 GGDDSLYGGAGSDLVYGGAGNDLLDSGDDQTGNDTLFGEDGDDSLRGGGGGDSLYGGTGQ 5649
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G + N+ + G+D G G D + A D
Sbjct: 5650 DTLDGGAGNDTLWGGDGDDTLSGGDGADRL-NGEAGDDTLDGGDGADFLWGGAGNDALDG 5708
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + L IL A + L G D
Sbjct: 5709 GAGDDTLTGDLGNDTLSGGAGNDILSGDAGDDTLDGGTGNDALSGGDGIDSL 5760
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 73/503 (14%), Positives = 123/503 (24%), Gaps = 68/503 (13%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALH-------------EIGHALGLMHPGS 139
I D G G + E G +G
Sbjct: 3322 SGGDGNDTLIGGIGNDTLDGGTGNDVYVYRIGDGRDFILDNGGLDRIEFGPGIGRGDLYF 3381
Query: 140 YNGGYPVY----GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV------ 189
G +Y G D + ++ + + G +DI
Sbjct: 3382 ARFGNDLYIRFRGRPTDEIVVTGRFNLAGDGTSFVERLAFADGSSFDLTRTDIALETVGV 3441
Query: 190 -AVQKIYGAP-----KGSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDL------- 233
A + + G +G+ GN+ Y +I GDDL+D
Sbjct: 3442 AAAEYLQGYNVGDRIEGTGGNDTILGYAGNDTLIGGTGSDSIDGGTGDDLIDGRDDPGTD 3501
Query: 234 ----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
T+ GG N L I G + +++ + + G G D + G + ++
Sbjct: 3502 GARDTISGGDGNDTVLGGGGSDVIFGGAGDDSLSGGGGNDGIDGGDGVDSIDGGAGDDNI 3561
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+GND G +G DT F A L + NE D L + AD
Sbjct: 3562 LGGAGNDTLAGGAGNDTLFSGAGDDLIR----YGGGSDTITNEAGNDVLEMGAGITRADL 3617
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+A L + ++G D +
Sbjct: 3618 YFARFGDDLHIRFRNSAERIVLTGRF-NGPGDGATFVQTLRFADGSDFAVTAQDI----- 3671
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
A T ++ + + ++ + D G D
Sbjct: 3672 ------------ALETVATDASEKLEGYNVGDIIRGQGGNDTIYGYTGDDSLDGGAGDDF 3719
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
++ + Y D+ + S Y G D L
Sbjct: 3720 LYAGTGDDSAEGGDGAD---ALYGDVGDDTLSGGAGNDSLYGEAGADSLSGGDGADFLSG 3776
Query: 530 IASHEDLINAFADAPDLVQAGKD 552
++ L AG D
Sbjct: 3777 GDGNDGLAGGAGADTLEGGAGND 3799
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/350 (13%), Positives = 91/350 (26%), Gaps = 19/350 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D S + D+ G G + + + G
Sbjct: 3766 SGGDGADFLSGGDGNDGLAGGAGADTLEGGAGNDLLEGGDGDDILKGGDGDDTLVGGGGT 3825
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G + + F + + + ++
Sbjct: 3826 DRLFTGAGNDTIRFDGGRET-----ITNEGGFDTLVIGGGLTKAEMYYARFGNDLYLRFR 3880
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ G+ + + + + D + L + T+ ++
Sbjct: 3881 ------NRGDEVVLTGRFKGEGDGASYVQRVLFADGQEADLTDPSLVLETVATDGPETLE 3934
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
GY N TI+ +++ G G+DV+ G + N+ F GND G SG D
Sbjct: 3935 GYHANDTISGLGGADAIFGYGGDDVLDGGAGNDTLFGGLGNDRLIGGSGADRL--EGGDG 3992
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV-KQRSILEYTASYEDLIQ 373
+ ++A + Y + DS++ L A + L+
Sbjct: 3993 DDTLEGGDDADLHYGGAGNDVIGGGGGGDYMEGGDGDDSLSGDAGNDTLYGDAGNDSLLG 4052
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSD 418
G D G + D Y G D + N G D
Sbjct: 4053 GEGDDSLRGGDGADTLEGGSGTNSILTGLGDDVIRYGGGRDTITNEGGRD 4102
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 6/163 (3%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
TL GG N L + + G + + + T S+ G +GND +IG S N+ +
Sbjct: 21 TLRGGAGNDTLLGNDGDDVLEGGDGDDRLDGGTGANSLFGGAGNDTLIGGSVNDSLDGGA 80
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G+DV G +G D I EN + + + A D
Sbjct: 81 GDDVISGGTGND--VISGGDGADSIDGGENDDSIDGGAGNDTILGGGGRDVVMAGDGDDL 138
Query: 354 V----NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
V NV + A + L +G D +
Sbjct: 139 VRDGDNVWSDDRFDGGAGNDTLDGGLGSDTLIGGAGNDRLTVG 181
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 12/143 (8%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G + + ++ GDDLLD + + G
Sbjct: 5941 GGNDTLSG---LRGDDTLIGGTGRDELHGGDGDDLLDSRADVA-------GSGDYDVAYG 5990
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N T+ +++ G SGNDV+ G ++ + +D G +G DT +
Sbjct: 5991 EAGNDTLLGGGGNDNLSGGSGNDVIDGGDGADMLAGGADDDRLTGGAGADTLV--GGTGR 6048
Query: 316 YKIYRFENAIIVYDANEHKQDFL 338
+ + ++ +
Sbjct: 6049 DSLEGGDGNDVLVGDAAADSGTV 6071
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 52/183 (28%), Gaps = 11/183 (6%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ + + + ++ G N T+ + + + G G+D + G + N F
Sbjct: 2 TSTVTTDGDDLLTGDWRADTLRGGAGNDTLLGNDGDDVLEGGDGDDRLDGGTGANSLFGG 61
Query: 293 SGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERL 344
+GND G S D+ + I + A + N+ D + + +
Sbjct: 62 AGNDTLIGGSVNDSLDGGAGDDVISGGTGNDVISGGDGADSIDGGENDDSIDGGAGNDTI 121
Query: 345 RFADQCIDSVNVKQRSILEYTA---SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ ++ S + G D + G D
Sbjct: 122 LGGGGRDVVMAGDGDDLVRDGDNVWSDDRFDGGAGNDTLDGGLGSDTLIGGAGNDRLTVG 181
Query: 402 YLY 404
Y
Sbjct: 182 NDY 184
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 52/427 (12%), Positives = 99/427 (23%), Gaps = 29/427 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D S + D G G ++ + +
Sbjct: 4307 GGDAGETFSGGDGNDRVEGNGGNDWLEGNAGNDSLLGGEGDDSLQGGDGADTLEGG---- 4362
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G+ + + Y + + + + ++
Sbjct: 4363 -SGTNSILTGLGDDVIRYSGGRDTITNEGGSDVLEIRTGLKREDLYFARFGNDLYLRFRN 4421
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-------------LTLIGGVKNY 242
A + L N I D DL D TL G
Sbjct: 4422 AADEIVLTNRFKGAGDGASYVQRILF-ADGREVDLTDPALKLETLAHDWAETLEGYNVGD 4480
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ I GY + T+ ++V G +G D+++GN ++ F +G+D G +
Sbjct: 4481 LIQGLGGNDIIYGYAGDDTLDGGAGGDAVYGGAGADLLLGNDGDDTLFGDAGDDTLIGGA 4540
Query: 303 GLDTFFYYAPS-------YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
G++T + A +Y I+ + L RF +
Sbjct: 4541 GINTLYGGAGDNVIRFDGGQDIVYNSGGNDIIELDASFDKAKLY---FSRFGNDLYVRFT 4597
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ I+ E + I +
Sbjct: 4598 GRTDQIIVKDRFNGAGDGAAYAQTLRFADGSREDLTRKDLVIQTIGGAGGEKLEGYNVGD 4657
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
D A +G + + A + D+I+ + G
Sbjct: 4658 TIDGQAGNDTIYGYGGDDTLSGGADNDQVRGGAGTDVIDGGVGNDMVYGGDGSDTVIGGD 4717
Query: 476 EEGRFVT 482
E R
Sbjct: 4718 GEDRLWG 4724
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 57/366 (15%), Positives = 94/366 (25%), Gaps = 60/366 (16%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLL--------------DLTLIGGVKNYIDLNTESWSS 252
Y + T++ G+D L D TL GG +
Sbjct: 3954 YGGDDVLDGGAGNDTLFGGLGNDRLIGGSGADRLEGGDGDDTLEGGDDADLHYGGAGNDV 4013
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
IGG + +S+ G +GND + G++ N+ G+D G G DT
Sbjct: 4014 IGGGGGGDYMEGGDGDDSLSGDAGNDTLYGDAGNDSLLGGEGDDSLRGGDGADT------ 4067
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
L + ++ Y + +
Sbjct: 4068 -------------------------------LEGGSGTNSILTGLGDDVIRYGGGRDTIT 4096
Query: 373 QVIGQDVFE---SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
G+DV E +K + G D+ G+ GA+ I
Sbjct: 4097 NEGGRDVLEIRIGLKREDLYFARFGNDLYLRFRDAGDEIVLTNRFKGAGDGASYVQRILF 4156
Query: 430 GV---KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ +P E L GKD + ++ S
Sbjct: 4157 ADGREVDLTDPALKLETLAHDWAETLEGYNVGDLIQGLGGKDTIYGYAGDDTLDGGAGSD 4216
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
LG D + G+ G D ++ A ++ L+
Sbjct: 4217 SILGGSGDDSLIGGAGDDQLE---GEDGNDLLLGGDGNDSIIGGAGNDTLLGGQGADQLY 4273
Query: 547 VQAGKD 552
AG D
Sbjct: 4274 GGAGDD 4279
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 65/276 (23%), Gaps = 59/276 (21%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ ++G G+D + G N+ GND DG +G D + Y I
Sbjct: 3307 ATDDLLLGQDGDDRLSGGDGNDTLIGGIGNDTLDGGTGNDVYVYRIGDGRDFILDNGGLD 3366
Query: 326 IVYDANEHKQ----------------------------------DFLSDVERLRFADQCI 351
+ + D S VERL FAD
Sbjct: 3367 RIEFGPGIGRGDLYFARFGNDLYIRFRGRPTDEIVVTGRFNLAGDGTSFVERLAFADGSS 3426
Query: 352 DS-------------------VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+E T + ++ G D
Sbjct: 3427 FDLTRTDIALETVGVAAAEYLQGYNVGDRIEGTGGNDTILGYAGNDTLIGGTGSDSIDGG 3486
Query: 393 EGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFKALEYI 446
G D+ D G+ D + G+D + G ++
Sbjct: 3487 TGDDLIDGRDDPGTDGARDTISGGDGNDTVLGGGGSDVIFGGAGDDSLSGGGGNDGIDGG 3546
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ + D L G D + + F
Sbjct: 3547 DGVDSIDGGAGDDNILGGAGNDTLAGGAGNDTLFSG 3582
Score = 45.2 bits (105), Expect = 0.032, Method: Composition-based stats.
Identities = 56/380 (14%), Positives = 97/380 (25%), Gaps = 38/380 (10%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
I +AD ++ + G V D D
Sbjct: 1583 GVENLIGSSRADRLVGDGQDNSLRGGAGADTLIGGDGSDTADYTGSAAGVTVSLADGTAD 1642
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
+ + + + A + D A + G
Sbjct: 1643 GGDAT----GDVLSGIENLTGSGAADRLTGDGGANRLRGG-----------GGNDTLIGG 1687
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++ G D D + G + ++L T G + + +E+++G+
Sbjct: 1688 AGADSLSGGAGLDTADYSASAGAVS-VNLATG-----IGRGGDAEGDRLDGVENLIGTGL 1741
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDT-------FFYYAPSYLYKIYRFENAIIVYD 329
D + G+ A N G D G +G DT F + RFE +V
Sbjct: 1742 ADSLTGDGAANYLDGRGGADSLAGGAGDDTLRVLDDGFASLDGGSGFDTLRFEGERLVVT 1801
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ +E + ++ + ++ IL T + D+ F E
Sbjct: 1802 GAGSGG--VRGIEAIDLGHPGRQTLILNEQGILADTGGGPLYVTGDRGDLVT----FKES 1855
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G G T S LY V D + G D A H
Sbjct: 1856 GWRRGGSETVGSILYNLYSRGTTTVHVQDGVRMFGDLVVTG----TVGDDVLTAPSGAGH 1911
Query: 450 EDLINAFADAPDLVQVGKDH 469
+ + G H
Sbjct: 1912 VVVFGEGGNDTVRFGAGFRH 1931
Score = 41.7 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 33/230 (14%), Positives = 54/230 (23%), Gaps = 28/230 (12%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVY 147
+ + I D G G I I G G N
Sbjct: 55 ANSLFGGAGNDTLIGGSVNDSLDGGAGDDVISGGTGNDVISGGDGADSIDGGENDDSIDG 114
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
G ND V+ D + D + D A
Sbjct: 115 GAGNDTILGGGGRDVVMAGDGDDLVRDGDNVWSDD--RFDGGA----------------- 155
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+ G+D L + + ++ G +A
Sbjct: 156 -GNDTLDGGLGSDTLIGGAGNDRLTVGNDYNGDVL--DGGDGDDTLIGGMGADRLADGAG 212
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ V G+D + ++V + +G D DG +G D +
Sbjct: 213 ADLVQAGGGDDQL-----DHVLSDQAGADTLDGGAGYDRLRVALTAGQVT 257
Score = 38.6 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 50/432 (11%), Positives = 95/432 (21%), Gaps = 72/432 (16%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + T D G G T+ +
Sbjct: 5671 SGGDGADRLNGEAGDDTLDGGDGADFLWGGAGNDALDGGAGDDTLTGDLGNDTL------ 5724
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G+ N D+ + + ++ +D++
Sbjct: 5725 -SGGAGNDILSGDAGDDTLDGGTGNDALSGGDGIDSLSGGDGDDTLDGGAGNDLL----- 5778
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G D +L GG + + L +
Sbjct: 5779 ----------------------------LGEAGQD----SLRGGDGDDVILGGAGNDILL 5806
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG--LDTFFYYAP 312
G N TI +++ G +G+D+VI + + GND G D ++
Sbjct: 5807 GDAGNDTIRGGDGDDAIDGGAGDDLVIYDGGRDTVRGGGGNDTLLFGDGFAADQLYFARL 5866
Query: 313 SYLYKI-----------------YRFENAIIVYDANEHKQDFLSDVERLRF----ADQCI 351
+ +A + + + L LR +
Sbjct: 5867 DNNLVLRFRDRAEQVVIANRFNGVGEGSAYLRTVRFQDGTEVLLSNPALRLESTGGEGAD 5926
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD-D 410
V +++ + L + G D E +G D+ GS D D
Sbjct: 5927 MLVGYVNGDLIDGRGGNDTLSGLRGDDTLIGGTGRDELHGGDGDDLLDSRADVAGSGDYD 5986
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ + G ++ + L D G D
Sbjct: 5987 VAYGEAGNDTLL----GGGGNDNLSGGSGNDVIDGGDGADMLAGGADDDRLTGGAGADTL 6042
Query: 471 SNFGCEEGRFVT 482
+
Sbjct: 6043 VGGTGRDSLEGG 6054
>gi|83749294|ref|ZP_00946292.1| RTX family calcium-binding cytotoxins and bacteriocins [Ralstonia
solanacearum UW551]
gi|83724025|gb|EAP71205.1| RTX family calcium-binding cytotoxins and bacteriocins [Ralstonia
solanacearum UW551]
Length = 1643
Score = 83.7 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 74/501 (14%), Positives = 133/501 (26%), Gaps = 25/501 (4%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ T R + + D G G T+
Sbjct: 889 DVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEGGNDTYLFG 948
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-IVA 190
G Y+ + + S + +D I A
Sbjct: 949 KGDGQDFIYSDYDTSAN-----KLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGTTDKITA 1003
Query: 191 VQKIYGAPKGSLGNNI--YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
Y + N + K + SGG D D L G + I
Sbjct: 1004 SMAFYWDDAANPYNPVQQVKFSDGTVWATADLQARASGGTDGADT-LTGSSGSDIIYALG 1062
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G + + +++ G GND++ G + N+ + +GNDV DG +G DT
Sbjct: 1063 GNDAVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLYGGNGNDVLDGGTGNDTLS 1122
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ Y + + +Y + + L+ ++ V ++ A
Sbjct: 1123 GEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGT 1182
Query: 369 EDLIQV----IGQDVFESMKHFYEFGLSEGRDITFDS-----YLYLGSYDDLRNVFGSDR 419
D I D + S+G + + S L +D
Sbjct: 1183 TDKITASMAFYWDDTANPYNPIQQVKFSDGTAWDLATIKAKALIGDDSSQTLVGYTEADT 1242
Query: 420 GAAARH----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
A Y G L ++ L + G D
Sbjct: 1243 INALGGNDNVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTG 1302
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
+ + YL D ++ SD +A K+G +P + S D
Sbjct: 1303 NDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPS---EVVVTRSGSD 1359
Query: 536 LINAFADAPDLVQAGKDHFSN 556
L+ + A D + A + +
Sbjct: 1360 LVLSIAGTTDKITASMAFYWD 1380
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 87/306 (28%), Gaps = 9/306 (2%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ T R + + D G G T+
Sbjct: 1259 DVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEGGNDTYLFG 1318
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-IVA 190
G Y+ + + S + +D I A
Sbjct: 1319 KGDGQDFIYSDYDTSAN-----KLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGTTDKITA 1373
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTE 248
Y + N I +++ + + TI GDD + + I+
Sbjct: 1374 SMAFYWDDTANPYNPIQQVKFSDGTTWDLATIKAKALIGDDSAQTLVGYTEADTIN-ALG 1432
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G + + +++ G GND++ G + N+ + +GNDV DG +G DT
Sbjct: 1433 GNDNVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLYGGNGNDVLDGGTGNDTLS 1492
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ Y + + +Y + + L+ ++ V ++ A
Sbjct: 1493 GEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGT 1552
Query: 369 EDLIQV 374
D I
Sbjct: 1553 TDKITA 1558
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 50/306 (16%), Positives = 83/306 (27%), Gaps = 40/306 (13%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G+ ND G+++ N F +GND+ DG +G D + IY +
Sbjct: 662 IGTENNDAFAGDASANTFNAGAGNDLLDGQAGNDNL--SGDAGDDVIYGGDGND------ 713
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
L+ D L A + L G D +
Sbjct: 714 -----------FLQGNDGADTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLF 762
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS--- 448
+G F Y S L + D A + +T + A + AS
Sbjct: 763 GKGDGQDFIYSDYDTSAGKLNVIQFKDGVAPSEVVVTRSGSDLVLSIAGTTDKITASMAF 822
Query: 449 ---------HEDLINAFADAPDLVQVGKDHFSNFGCEEGRF----VTFDSYLYLGSYDDL 495
+ F+D + G + + D+ LG D++
Sbjct: 823 YWDDTANPYNPIQQVKFSDGTTWDLATIKAKALIGDDSSQTLVGYTEADTINALGGNDNV 882
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G D G + L A +++L + G D S
Sbjct: 883 YGQGGDDVLD-----GGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLS 937
Query: 556 NFGYEE 561
G +
Sbjct: 938 GEGGND 943
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 55/365 (15%), Positives = 105/365 (28%), Gaps = 16/365 (4%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
++ +V + D+ D T G N + ++ G + I
Sbjct: 649 SVTGFDVFAAAATIGTENNDAFAGDASANTFNAGAGNDLLDGQAGNDNLSGDAGDDVIYG 708
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G+ G D + G + ++ + +GND DG +G DT + Y + +
Sbjct: 709 GDGNDFLQGNDGADTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQ 768
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV----IGQDVF 380
+Y + L+ ++ V ++ A D I D
Sbjct: 769 DFIYSDYDTSAGKLNVIQFKDGVAPSEVVVTRSGSDLVLSIAGTTDKITASMAFYWDDTA 828
Query: 381 ESMKHFYEFGLSEGRDITFDS-----YLYLGSYDDLRNVFGSDRGAAARH----YITHGV 431
+ S+G + + S L +D A Y G
Sbjct: 829 NPYNPIQQVKFSDGTTWDLATIKAKALIGDDSSQTLVGYTEADTINALGGNDNVYGQGGD 888
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
L ++ L + G D + + YL
Sbjct: 889 DVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEGGNDTYLFG 948
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
D ++ SD +A K+G +P + S DL+ + A D + A
Sbjct: 949 KGDGQDFIYSDYDTSANKLNVIQFKDGVSPS---EVVVTRSGSDLVLSIAGTTDKITASM 1005
Query: 552 DHFSN 556
+ +
Sbjct: 1006 AFYWD 1010
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 66/517 (12%), Positives = 126/517 (24%), Gaps = 61/517 (11%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
S +D + + DV G G T+ +
Sbjct: 1038 RASGGTDGADTLTGSSGSDIIYALGGNDAVYGQGGDDVLDGGAGNDTLYGGEGNDILRGG 1097
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+ NG + G + + F D Y + ++ +
Sbjct: 1098 ADNDNLYGGNGNDVLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNV--I 1155
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Q G + ++ + I S D + + +
Sbjct: 1156 QFKDGVSPSEVVVTRSGSDLVLSIAGTTDKITASMAFYWDDTANPYNPIQQVKFSDGTAW 1215
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + I + +++VG + D + N+ + G+DV DG +G DT +
Sbjct: 1216 DLATIKAKALIGDDSS-QTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTLY--- 1271
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
D L L + L
Sbjct: 1272 -------------------GGEGNDTLRG---------------GADNDNLYGGNGNDTL 1297
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D + +G F Y S + L + D + + +T
Sbjct: 1298 DGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVVVTRSG 1357
Query: 432 KEGRNPDAFKALEYIAS------------HEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ A + AS + F+D + G + +
Sbjct: 1358 SDLVLSIAGTTDKITASMAFYWDDTANPYNPIQQVKFSDGTTWDLATIKAKALIGDDSAQ 1417
Query: 480 F----VTFDSYLYLGSYDDLRNVFGSDR----GAAARHYITHGVKEGRNPDAFKALEYIA 531
D+ LG D++ G D Y G R L
Sbjct: 1418 TLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLYGGN 1477
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
++ L + + G D + FG +G+ ++
Sbjct: 1478 GNDVLDGGTGNDTLSGEGGNDTYL-FGKGDGQDFIYS 1513
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 51/450 (11%), Positives = 103/450 (22%), Gaps = 86/450 (19%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ R + + DV G G T+
Sbjct: 1074 DVLDGGAGNDTLYGGEGNDILRGGADNDNLYGGNGNDVLDGGTGNDTLSGEGGNDTYLFG 1133
Query: 132 LGLMHPGSYNGGYPVYGVDN-----DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
G Y+ N D + S + S S+ + A+
Sbjct: 1134 KGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGTTDKITASMAFY 1193
Query: 187 -DIVAVQKIYGAPKGSLGNNIYKIEV----QQKDSPFIQTIYDSGGDDLLDLTL-----I 236
D A + + QT+ D ++
Sbjct: 1194 WDDTANPYNPIQQVKFSDGTAWDLATIKAKALIGDDSSQTLVGYTEADTINALGGNDNVY 1253
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + ++ G E N T+ +++ G +GND + G + N+ GND
Sbjct: 1254 GQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEGGND 1313
Query: 297 V-FDG-SSGLDTFF--------------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G G D + + ++ + + + D ++
Sbjct: 1314 TYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGTTDKITA 1373
Query: 341 ---------------VERLRFADQC----------------------------------- 350
+++++F+D
Sbjct: 1374 SMAFYWDDTANPYNPIQQVKFSDGTTWDLATIKAKALIGDDSAQTLVGYTEADTINALGG 1433
Query: 351 -IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ +L+ A + L G D+ G D+ D
Sbjct: 1434 NDNVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLYGGNGNDVL----DGGTGND 1489
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L G+D + + + A
Sbjct: 1490 TLSGEGGNDTYLFGKGDGQDFIYSDYDTSA 1519
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 63/477 (13%), Positives = 106/477 (22%), Gaps = 97/477 (20%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGG 238
D A GA L IY G+D L D G
Sbjct: 671 AGDASANTFNAGAGNDLLDGQA--GNDNLSGDAGDDVIYGGDGNDFLQGNDGADTLDGGT 728
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE------- 291
+ + ++ G N T++ ++ + G+ S +
Sbjct: 729 GDDTL-YGGAGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSAGKLNVIQF 787
Query: 292 ------------SSGNDVFDGSSG-------------LDTFFYYAPSYLYKIYRFENAII 326
SG+D+ +G DT Y P K +
Sbjct: 788 KDGVAPSEVVVTRSGSDLVLSIAGTTDKITASMAFYWDDTANPYNPIQQVKFSDGTTWDL 847
Query: 327 VY------DANEHKQDFLSDVER--LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++ Q + E + + +L+ A + L G D
Sbjct: 848 ATIKAKALIGDDSSQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTLYGGEGND 907
Query: 379 VFESMKHFYEFGLSEGRDIT-----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG--- 430
G D D+ G D G + Y T
Sbjct: 908 TLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKL 967
Query: 431 ----VKEGRNPDA--------------------------FKALEYIASHEDLINAFADAP 460
K+G +P F + + +
Sbjct: 968 NVIQFKDGVSPSEVVVTRSGSDLVLSIAGTTDKITASMAFYWDDAANPYNPVQQVKFSDG 1027
Query: 461 DLVQVGKDHFSNFGCEEGRFV-----TFDSYLYLGSYDDLRNVFGSDR----GAAARHYI 511
+ G +G D LG D + G D Y
Sbjct: 1028 TVWATADLQARASGGTDGADTLTGSSGSDIIYALGGNDAVYGQGGDDVLDGGAGNDTLYG 1087
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
G R L ++ L + + G D + FG +G+ ++
Sbjct: 1088 GEGNDILRGGADNDNLYGGNGNDVLDGGTGNDTLSGEGGNDTYL-FGKGDGQDFIYS 1143
>gi|187939503|gb|ACD38652.1| putative calcium-binding hemolysin protein [Pseudomonas aeruginosa]
Length = 769
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/428 (12%), Positives = 105/428 (24%), Gaps = 42/428 (9%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
T + D+ + G T+ + LG + G
Sbjct: 222 YGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEA-G 280
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
VY D + D+ S + + + + +
Sbjct: 281 NDVYRFDRGWGQDTVYNYDSSTSRVDAIEFGTGIRAEDITLSRNSDDLILLLKGSTDRIT 340
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLD----LTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ Y + + + G +D L N ++ G N
Sbjct: 341 VSSYFNQDAAGSYRLEEIRFVDGQVLNIDAVKTLVQQATDGNDRLYGYAVADTLSGGLGN 400
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++ + + + G GND + G + ++ GND G +G D + + I
Sbjct: 401 DSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLYGEAGNDVYRFDRGWGQDTIQ 460
Query: 320 RFENAIIVYDANEHKQDFLSD-------------------------------------VE 342
++ DA E ++ +E
Sbjct: 461 NNDSNTNKIDAIEFGSGISANDILLNRDSDNLVLTLKNSTDRITVSSYFSQDATSNYRLE 520
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+RF D + +++ + + + T + L D G D+
Sbjct: 521 EIRFVDGQVLNIDTVKSLVQQATDGNDRLFGYAVADTLSGGLGNDSLYGYAGNDLLQGDE 580
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
Y N + Y G + L A + LI +
Sbjct: 581 GNDTLYGGAGNDTLIGGADSDYLYGEDGDDRIEGNNGNDTLYGGAGEDTLIGGSGNDYLA 640
Query: 463 VQVGKDHF 470
G D +
Sbjct: 641 GDAGNDIY 648
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/547 (11%), Positives = 135/547 (24%), Gaps = 68/547 (12%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+D T + D+ + G T+ + L
Sbjct: 47 VQQATDGNDRLFGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGNDTLVGGL 106
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G + G VY D + D+ + S + + + +
Sbjct: 107 GNDYLYGEA-GNDVYRFDRGWGQDTLINSDSNIDKTDTIEFGTGIRAEDIILSRNSDDLI 165
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD----LTLIGGVKNYIDLNTE 248
+ + + Y + + + G +D L G ++
Sbjct: 166 LLLKGSSDRITVSSYFNQDAAGSYRLEEIRFVDGQVLNIDAVKALVQKGTTESDRLYGYA 225
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G N ++ + + + G GND + G + ++ GND G +G D +
Sbjct: 226 VADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLQGEAGNDVYR 285
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---------------------------- 340
+ +Y ++++ DA E ++
Sbjct: 286 FDRGWGQDTVYNYDSSTSRVDAIEFGTGIRAEDITLSRNSDDLILLLKGSTDRITVSSYF 345
Query: 341 ---------VERLRFADQCIDSVNV---------KQRSILEYTASYEDLIQVIGQDVFES 382
+E +RF D + +++ L A + L +G D
Sbjct: 346 NQDAAGSYRLEEIRFVDGQVLNIDAVKTLVQQATDGNDRLYGYAVADTLSGGLGNDSLYG 405
Query: 383 MKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
EG D + D+ + D L G+D R + ++ +
Sbjct: 406 YAGNDLLQGDEGNDTLYGGAGDDTLVGGLGNDYLYGEAGNDVYRFDRGWGQDTIQNNDSN 465
Query: 438 DA-----------FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ D + +FS R
Sbjct: 466 TNKIDAIEFGSGISANDILLNRDSDNLVLTLKNSTDRITVSSYFSQDATSNYRLEEIRFV 525
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPD 545
D + V + + +L A ++ L +
Sbjct: 526 DGQVLNIDTVKSLVQQATDGNDRLFGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTL 585
Query: 546 LVQAGKD 552
AG D
Sbjct: 586 YGGAGND 592
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 46/359 (12%), Positives = 87/359 (24%), Gaps = 43/359 (11%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+D T + D+ + G T+ + L
Sbjct: 375 VQQATDGNDRLYGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGDDTLVGGL 434
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G + G VY D + D+ + + + + D +
Sbjct: 435 GNDYLYGEA-GNDVYRFDRGWGQDTIQNNDSNTNKIDAIEFGSGISANDILLNRDSDNLV 493
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ + Y + + + + G +D +
Sbjct: 494 LTLKNSTDRITVSSYFSQDATSNYRLEEIRFVDGQVLNIDTVKSLVQQAT---------- 543
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N + + V +++ G GND + G + N++ GND G +G DT
Sbjct: 544 ----DGNDRLFGYAVADTLSGGLGNDSLYGYAGNDLLQGDEGNDTLYGGAGNDTLI--GG 597
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +Y D L A + LI
Sbjct: 598 ADSDYLYG--------------------------EDGDDRIEGNNGNDTLYGGAGEDTLI 631
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D + L G + + S R F + A + G
Sbjct: 632 GGSGNDYLAGDAGNDIYQLGNGWGQDTINNYHTESNALDRLEFTDNITADKLWFSKSGN 690
>gi|300705400|ref|YP_003747003.1| calcium binding hemolysin protein (modular protein) [Ralstonia
solanacearum CFBP2957]
gi|299073064|emb|CBJ44421.1| Putative calcium binding hemolysin protein (modular protein)
[Ralstonia solanacearum CFBP2957]
Length = 2266
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 60/440 (13%), Positives = 112/440 (25%), Gaps = 48/440 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
T + +D + + G G +N G + +
Sbjct: 1711 GGAGNDTLYGGSGNDTLEGGAGNDYLSGEGGSDTYVFNSGWGQDTINNYDTSSGRSDVIA 1770
Query: 136 HPGSYNGGYPVYGVDN-----DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+ N S +V YF + + V
Sbjct: 1771 FGEGITATDVIATRSGEDLILSLRNGSDKITVQYYFSGDGTGAYRVDLIRFADGTTWDVK 1830
Query: 191 VQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ +N+Y + + TI GG+D L G +
Sbjct: 1831 TVSAKTIGATNAADNLYGYATDDEINGLNGNDTIRGYGGNDTL----RGDAGADTLYGGD 1886
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G N + ++++G +GND + G S N+ +GND G G DT+
Sbjct: 1887 GNDTVDGGADNDYLYGENGDDNLLGGAGNDTLYGGSGNDTLEGGAGNDYLSGEGGSDTYV 1946
Query: 309 YYAPSYLYKIYRFENA--------------IIVYDANEHKQDFLSD-------------- 340
+ I ++ A +D +
Sbjct: 1947 FNPGWGQDTINNYDTTSGRADVIAFGEGIAATDVIATRSGEDLILSLRNGSDRITVQYYF 2006
Query: 341 ---------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
++++RFAD V + + T+ ++L DV + F
Sbjct: 2007 SSDATGPYRIDQVRFADGTTWDVAAVKALVQVPTSGADNLYGYASDDVLNGLDGNDTFRG 2066
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
G D Y N Y +G L + ++
Sbjct: 2067 YGGNDTLRGDAGADTLYGGDGNDMLDGGADNDYLYGENGDDSLLGGAGNDTLYGGSGNDT 2126
Query: 452 LINAFADAPDLVQVGKDHFS 471
L + + G D +
Sbjct: 2127 LEGGSGNDYLSGEGGSDTYV 2146
Score = 81.8 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 61/445 (13%), Positives = 118/445 (26%), Gaps = 50/445 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
T + +D + + G G +N G + +
Sbjct: 1311 GGAGNDTLYGGSGNDTLEGGAGNDYLSGEGGSDTYVFNSGWGQDTINNYDTTSGRSDVIA 1370
Query: 136 HPGSYNGGYPVYGVDN-----DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV-SDIV 189
+ N S +V YF + D+
Sbjct: 1371 FGEGITATDVIATRSGEDLILSLRNGSDRITVQYYFSSDATGPYRIDQVRFADGTTWDVA 1430
Query: 190 AVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
AV+ + P +N+Y + T+ GG+D L G
Sbjct: 1431 AVKALVQVPTSGA-DNLYGYASDDVLNGLDGNDTLRGYGGNDTL----RGDAGADTLYGG 1485
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ ++ G N + +S++G +GND + G S N+ +GND G G DT+
Sbjct: 1486 DGNDTVDGGADNDYLYGENGDDSLLGGAGNDTLYGGSGNDTLEGGAGNDYLSGEGGSDTY 1545
Query: 308 FYYAPSYLYKIYRFE------------------------NAIIVYDANEHKQDFLS---- 339
+ + I ++ + + + + D ++
Sbjct: 1546 VFNSGWGQDTINNYDTTSGRSDVIAFGEGITATDVIATRSGEDLILSLRNGSDRVTVQYY 1605
Query: 340 ---------DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
++++RFAD V + + T+ ++L DV +
Sbjct: 1606 FSSDATGPYRIDQVRFADGTTWDVAAVKALVQVPTSGADNLYGYASDDVLNGLDGNDTLR 1665
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G D Y N Y +G L + ++
Sbjct: 1666 GYAGNDTLRGDAGADTLYGGDGNDTVDGGADNDYLYGENGDDSLLGGAGNDTLYGGSGND 1725
Query: 451 DLINAFADAPDLVQVGKDHFSNFGC 475
L + + G D +
Sbjct: 1726 TLEGGAGNDYLSGEGGSDTYVFNSG 1750
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 62/437 (14%), Positives = 117/437 (26%), Gaps = 50/437 (11%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ T S + +D + + G G +N G + +
Sbjct: 719 YGDAGNDTLDGGSGNDHLSGNEGSDTYVFNAGWGQDTINNYDTSSGRSDTITFGTGIATS 778
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP------MVSDIVAVQKIYGA 197
+ + S S + D + Y D+ AV+ +
Sbjct: 779 DILATRSGEDLILSLRNSSDKITVQYYFSGDGAGAYRVDLIRFADGTSWDVAAVKALVQV 838
Query: 198 PKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
P +N+Y + T+ GG+D L G + ++ G
Sbjct: 839 PTSGA-DNLYGYASDDVLNGLDGNDTLRGYGGNDTL----RGDAGADTLYGGDGNDTVDG 893
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N + +S++G +GND + G S N+ +GND G G DT+ + +
Sbjct: 894 GADNDYLYGENGDDSLLGGAGNDTLYGGSGNDTLEGGAGNDYLSGEGGSDTYVFNSGWGQ 953
Query: 316 YKIYRFEN--------------AIIVYDANEHKQDFLSD--------------------- 340
I ++ A +D +
Sbjct: 954 DTINNYDTTSGRSDVIAFGEGITATDVIATRSGEDLILSLRNGSDRITVQYYFSSDATGP 1013
Query: 341 --VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++++RFAD V + + T+ ++L DV + G D
Sbjct: 1014 YRIDQVRFADGTTWDVAAVKALVQVPTSGADNLYGYASDDVLNGLDGNDTLRGYGGNDTL 1073
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
Y N Y +G L + ++ L +
Sbjct: 1074 RGDAGADTLYGGDGNDMLDGGADNDYLYGENGDDSLLGGAGNDTLYGGSGNDTLEGGAGN 1133
Query: 459 APDLVQVGKDHFSNFGC 475
+ G D +
Sbjct: 1134 DYLSGEGGSDTYVFNSG 1150
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 61/441 (13%), Positives = 112/441 (25%), Gaps = 50/441 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
T + +D + + G G +N G + +
Sbjct: 1511 GGAGNDTLYGGSGNDTLEGGAGNDYLSGEGGSDTYVFNSGWGQDTINNYDTTSGRSDVIA 1570
Query: 136 HPGSYNGGYPVYGVDN-----DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV-SDIV 189
+ N S +V YF + D+
Sbjct: 1571 FGEGITATDVIATRSGEDLILSLRNGSDRVTVQYYFSSDATGPYRIDQVRFADGTTWDVA 1630
Query: 190 AVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
AV+ + P +N+Y + T+ G+D L G
Sbjct: 1631 AVKALVQVPTSGA-DNLYGYASDDVLNGLDGNDTLRGYAGNDTL----RGDAGADTLYGG 1685
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ ++ G N + +S++G +GND + G S N+ +GND G G DT+
Sbjct: 1686 DGNDTVDGGADNDYLYGENGDDSLLGGAGNDTLYGGSGNDTLEGGAGNDYLSGEGGSDTY 1745
Query: 308 FYYAPSYLYKIYRFENA--------------IIVYDANEHKQDFLSD------------- 340
+ + I ++ + A +D +
Sbjct: 1746 VFNSGWGQDTINNYDTSSGRSDVIAFGEGITATDVIATRSGEDLILSLRNGSDKITVQYY 1805
Query: 341 ----------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
V+ +RFAD V + T + ++L D +
Sbjct: 1806 FSGDGTGAYRVDLIRFADGTTWDVKTVSAKTIGATNAADNLYGYATDDEINGLNGNDTIR 1865
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G D Y N Y +G L + ++
Sbjct: 1866 GYGGNDTLRGDAGADTLYGGDGNDTVDGGADNDYLYGENGDDNLLGGAGNDTLYGGSGND 1925
Query: 451 DLINAFADAPDLVQVGKDHFS 471
L + + G D +
Sbjct: 1926 TLEGGAGNDYLSGEGGSDTYV 1946
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 62/512 (12%), Positives = 124/512 (24%), Gaps = 51/512 (9%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ + D G G T+ + + G +
Sbjct: 1081 TLYGGDGNDMLDGGADNDYLYGENGDDSLLGGAGNDTLYGGSGNDTLEGGAGNDYLSGEG 1140
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS------------DIV 189
G ++ S + + S D V
Sbjct: 1141 GSDTYVFNSGWGQDTINNYDTTSGRSDVIAFGEGITATDVIATRSGEDLILSLRNGSDRV 1200
Query: 190 AVQKIYGAPKG---------SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
VQ + + + + + + D+ D L G
Sbjct: 1201 TVQYYFSSDATGPYRIDQVRFADGTTWDVAAVKALVQVPTSGADNLYGYASDDVLNGLDG 1260
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N ++ G T+ + + G + ND + G + ++ +GND G
Sbjct: 1261 NDTFRGYGGNDTLRGDAGADTLYGGDGNDMLDGGADNDYLYGENGDDSLLGGAGNDTLYG 1320
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
SG DT + + + + QD +++ + I +
Sbjct: 1321 GSGNDTL--EGGAGNDYLSGEGGSDTYVFNSGWGQDTINNYDTTSGRSDVIAFGEGITAT 1378
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ T S EDLI + +Y + G G+ D+ V
Sbjct: 1379 DVIATRSGEDLILSLRNGSDRITVQYYFSSDATGPYRIDQVRFADGTTWDVAAV------ 1432
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
A T G + L + ++ L + G D +
Sbjct: 1433 KALVQVPTSGADNLYGYASDDVLNGLDGNDTLRGYGGNDTLRGDAGADTLYGGDGNDTVD 1492
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
D+ G D + G+ L + ++ L
Sbjct: 1493 GGADNDYLYGENGDDSLLGGA---------------------GNDTLYGGSGNDTLEGGA 1531
Query: 541 ADAPDLVQAGKDHFS-NFGYEEGRSITFNPDL 571
+ + G D + N G+ + ++
Sbjct: 1532 GNDYLSGEGGSDTYVFNSGWGQDTINNYDTTS 1563
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 64/511 (12%), Positives = 128/511 (25%), Gaps = 50/511 (9%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+D ++ NG + D G G +
Sbjct: 1491 VDGGADNDYLYGENGDDSLL-GGAGNDTLYGGSGNDTLEGGAGNDYLSGEGGSDTYVFNS 1549
Query: 133 GLMHPGSYNGGYPVYGVDNDYEND-----------SFLTSVMSYFMPQDSMMDASFGYCA 181
G N D + S ++S D + +
Sbjct: 1550 GWGQDTINNYDTTSGRSDVIAFGEGITATDVIATRSGEDLILSLRNGSDRVTVQYYFSSD 1609
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
I V+ + + + + D+ D L G N
Sbjct: 1610 ATGPYRIDQVRF--------ADGTTWDVAAVKALVQVPTSGADNLYGYASDDVLNGLDGN 1661
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
++ G T+ ++V G + ND + G + ++ +GND G
Sbjct: 1662 DTLRGYAGNDTLRGDAGADTLYGGDGNDTVDGGADNDYLYGENGDDSLLGGAGNDTLYGG 1721
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
SG DT + + + + QD +++ + I +
Sbjct: 1722 SGNDTL--EGGAGNDYLSGEGGSDTYVFNSGWGQDTINNYDTSSGRSDVIAFGEGITATD 1779
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ T S EDLI + + +Y G G G+ D++ V GA
Sbjct: 1780 VIATRSGEDLILSLRNGSDKITVQYYFSGDGTGAYRVDLIRFADGTTWDVKTVSAKTIGA 1839
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
T+ + + ++ + + G D +
Sbjct: 1840 ------TNAADNLYGYATDDEINGLNGNDTIRGYGGNDTLRGDAGADTLYGGDGNDTVDG 1893
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
D+ G D + G+ L + ++ L
Sbjct: 1894 GADNDYLYGENGDDNLLGGA---------------------GNDTLYGGSGNDTLEGGAG 1932
Query: 542 DAPDLVQAGKDHFS-NFGYEEGRSITFNPDL 571
+ + G D + N G+ + ++
Sbjct: 1933 NDYLSGEGGSDTYVFNPGWGQDTINNYDTTS 1963
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 61/501 (12%), Positives = 118/501 (23%), Gaps = 59/501 (11%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
T + + D G G T+ + + G +
Sbjct: 1681 TLYGGDGNDTVDGGADNDYLYGENGDDSLLGGAGNDTLYGGSGNDTLEGGAGNDYLSGEG 1740
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS------------DIV 189
G ++ S + + S D +
Sbjct: 1741 GSDTYVFNSGWGQDTINNYDTSSGRSDVIAFGEGITATDVIATRSGEDLILSLRNGSDKI 1800
Query: 190 AVQKIYGAPKG---------SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
VQ + + ++ + D+ D + G
Sbjct: 1801 TVQYYFSGDGTGAYRVDLIRFADGTTWDVKTVSAKTIGATNAADNLYGYATDDEINGLNG 1860
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N ++ G T+ ++V G + ND + G + ++ +GND G
Sbjct: 1861 NDTIRGYGGNDTLRGDAGADTLYGGDGNDTVDGGADNDYLYGENGDDNLLGGAGNDTLYG 1920
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
SG DT + + + QD +++ + I +
Sbjct: 1921 GSGNDTL--EGGAGNDYLSGEGGSDTYVFNPGWGQDTINNYDTTSGRADVIAFGEGIAAT 1978
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ T S EDLI + +Y + G G+ D+ V
Sbjct: 1979 DVIATRSGEDLILSLRNGSDRITVQYYFSSDATGPYRIDQVRFADGTTWDVAAV------ 2032
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
A T G + L + ++ + G D +
Sbjct: 2033 KALVQVPTSGADNLYGYASDDVLNGLDGNDTFRGYGGNDTLRGDAGADTLYGGDGNDMLD 2092
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
D+ G D +L A ++ L
Sbjct: 2093 GGADNDYLYGENGD------------------------------DSLLGGAGNDTLYGGS 2122
Query: 541 ADAPDLVQAGKDHFSNFGYEE 561
+ +G D+ S G +
Sbjct: 2123 GNDTLEGGSGNDYLSGEGGSD 2143
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 71/501 (14%), Positives = 124/501 (24%), Gaps = 43/501 (8%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D G T R D+ D D G + N + G
Sbjct: 859 DGNDTLRGYGGNDTLRGDAGADTLYGGDGNDTVDGGADNDYLYGENGDDSLLGGAG-NDT 917
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G + S +Y D Y T SD++A + G
Sbjct: 918 LYGGSGNDTLEGGAGNDYLSGEGGSDTYVFNSGWGQDTINNYDTTSGRSDVIAFGE--GI 975
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN--TESWSSIGG 255
+ ++ I + ID + +
Sbjct: 976 TATDVIATRSGEDLILSLRNGSDRI-----TVQYYFSSDATGPYRIDQVRFADGTTWDVA 1030
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
K + + +++ G + +DV+ G N+ GND G +G DT +
Sbjct: 1031 AVKALVQVPTSGADNLYGYASDDVLNGLDGNDTLRGYGGNDTLRGDAGADTLY------- 1083
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ ++ ++ + + + L + + L
Sbjct: 1084 ----GGDGNDMLDGGADNDYLYGEN--------GDDSLLGGAGNDTLYGGSGNDTLEGGA 1131
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK--- 432
G D + + G + S FG A G
Sbjct: 1132 GNDYLSGEGGSDTYVFNSGWGQDTINNYDTTSGRSDVIAFGEGITATDVIATRSGEDLIL 1191
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
RN ++Y S + D + + LY +
Sbjct: 1192 SLRNGSDRVTVQYYFSSDATGPYRIDQVRFADGTTWDVAAVKALVQVPTSGADNLYGYAS 1251
Query: 493 DDLRNVFGSDRGAAARHYITH-------GVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
DD+ N G D R Y + G D L+ A ++ L D
Sbjct: 1252 DDVLN--GLDGNDTFRGYGGNDTLRGDAGADTLYGGDGNDMLDGGADNDYLYGENGDDSL 1309
Query: 546 LVQAGKDHFSNFGYEEGRSIT 566
L AG D + +G ++
Sbjct: 1310 LGGAGND--TLYGGSGNDTLE 1328
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 83/301 (27%), Gaps = 13/301 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
T + +D + + G G +N G A +
Sbjct: 1911 GGAGNDTLYGGSGNDTLEGGAGNDYLSGEGGSDTYVFNPGWGQDTINNYDTTSGRADVIA 1970
Query: 136 HPGSYNGGYPVYGVDN-----DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV-SDIV 189
+ N S +V YF + D+
Sbjct: 1971 FGEGIAATDVIATRSGEDLILSLRNGSDRITVQYYFSSDATGPYRIDQVRFADGTTWDVA 2030
Query: 190 AVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
AV+ + P +N+Y + T GG+D L G
Sbjct: 2031 AVKALVQVPTSGA-DNLYGYASDDVLNGLDGNDTFRGYGGNDTL----RGDAGADTLYGG 2085
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + G N + +S++G +GND + G S N+ SGND G G DT+
Sbjct: 2086 DGNDMLDGGADNDYLYGENGDDSLLGGAGNDTLYGGSGNDTLEGGSGNDYLSGEGGSDTY 2145
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + I ++ D +D R + ++ + +
Sbjct: 2146 VFKSSWGQDTINNYDTTSSRSDVIAFGTGIATDQLWFRRVNGDLEVSLIGSTDKTTLSNW 2205
Query: 368 Y 368
Y
Sbjct: 2206 Y 2206
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/258 (15%), Positives = 67/258 (25%), Gaps = 37/258 (14%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G I + +V GND V G++ N+ SGND G+ G DT+ + A
Sbjct: 693 GTNTVDYIYGRDGNDVLVAKGGNDYVYGDAGNDTLDGGSGNDHLSGNEGSDTYVFNAGWG 752
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSD---------------------------------- 340
I ++ + D +
Sbjct: 753 QDTINNYDTSSGRSDTITFGTGIATSDILATRSGEDLILSLRNSSDKITVQYYFSGDGAG 812
Query: 341 ---VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
V+ +RFAD V + + T+ ++L DV + G D
Sbjct: 813 AYRVDLIRFADGTSWDVAAVKALVQVPTSGADNLYGYASDDVLNGLDGNDTLRGYGGNDT 872
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
Y N Y +G L + ++ L
Sbjct: 873 LRGDAGADTLYGGDGNDTVDGGADNDYLYGENGDDSLLGGAGNDTLYGGSGNDTLEGGAG 932
Query: 458 DAPDLVQVGKDHFSNFGC 475
+ + G D +
Sbjct: 933 NDYLSGEGGSDTYVFNSG 950
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 52/342 (15%), Positives = 97/342 (28%), Gaps = 39/342 (11%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
LD + L + ++ G + + ++ + G GNDV++ N+ +
Sbjct: 660 LDAFTEELSSWTVRLAASAEHNLTGTSQPDLLVGTNTVDYIYGRDGNDVLVAKGGNDYVY 719
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+GND DG SG D + E + QD +++ +
Sbjct: 720 GDAGNDTLDGGSGNDH-----------LSGNEGSDTYVFNAGWGQDTINNYDTSSGRSDT 768
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
I S + T S EDLI + + +Y G G G+ D
Sbjct: 769 ITFGTGIATSDILATRSGEDLILSLRNSSDKITVQYYFSGDGAGAYRVDLIRFADGTSWD 828
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ V A T G + L + ++ L + G D
Sbjct: 829 VAAV------KALVQVPTSGADNLYGYASDDVLNGLDGNDTLRGYGGNDTLRGDAGADTL 882
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
+ D+ G D + G+ L
Sbjct: 883 YGGDGNDTVDGGADNDYLYGENGDDSLLGGA---------------------GNDTLYGG 921
Query: 531 ASHEDLINAFADAPDLVQAGKDHFS-NFGYEEGRSITFNPDL 571
+ ++ L + + G D + N G+ + ++
Sbjct: 922 SGNDTLEGGAGNDYLSGEGGSDTYVFNSGWGQDTINNYDTTS 963
>gi|261380309|ref|ZP_05984882.1| putative dextranase [Neisseria subflava NJ9703]
gi|284796823|gb|EFC52170.1| putative dextranase [Neisseria subflava NJ9703]
Length = 854
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 78/226 (34%), Gaps = 17/226 (7%)
Query: 198 PKGSLGNNIYKIEVQ--QKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
++I E + + I+ G+D L D + G + I
Sbjct: 639 NGTHADDHIKGTESEDIIYGNRGNDEIHGGSGNDKLSGGTGDDVINGDAGSDILYGGGGN 698
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N T+ + ++++G +GND++ G + N+ F G+D+ G +G DT+ +
Sbjct: 699 DHLNGGLDNDTLYGGSGNDTMLGEAGNDILHGGAGNDTLFGGLGDDILHGEAGNDTYVFN 758
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
I+ + + LS +E + D + ++ D
Sbjct: 759 RGEGHDTIFDHHSTNAIQFGAGISLSDLS-LETVNEKDGT------TWNITIRGENNHND 811
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
LI + D + H G F + D L ++ G
Sbjct: 812 LITI---DHQYADIHTDVQGQKIPSVSEFRFDEGTFNIDQLMHILG 854
Score = 45.2 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 36/157 (22%), Gaps = 10/157 (6%)
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
Q F + I+ +++ G D
Sbjct: 622 LGQASVSQTFADGKTTFNGTHADDHIKGTESEDIIYGNRGNDEIHGGSGNDKLSGGTGDD 681
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G DI Y G +D N + Y G L A
Sbjct: 682 VINGDAGSDIL-----YGGGGNDHLNGGLDNDTL----YGGSGNDTMLGEAGNDILHGGA 732
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
++ L D + G D + F EG FD
Sbjct: 733 GNDTLFGGLGDDILHGEAGNDTYV-FNRGEGHDTIFD 768
Score = 37.5 bits (85), Expect = 7.5, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 43/172 (25%), Gaps = 12/172 (6%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
+ D + L + + + + + + Y D I+
Sbjct: 609 PSLDVWDMLYVSNLGQASVSQTFADGKTTFNGTHADDHIKGTESEDIIYGNRGNDEIHGG 668
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
+ L D N LY G +D N + Y G
Sbjct: 669 SGNDKLSGGTGDDVINGDAGS-------DILYGGGGNDHLNGGLDNDTL----YGGSGND 717
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
L A ++ L D +AG D + F EG F+
Sbjct: 718 TMLGEAGNDILHGGAGNDTLFGGLGDDILHGEAGNDTYV-FNRGEGHDTIFD 768
>gi|168705243|ref|ZP_02737520.1| Hemolysin-type calcium-binding region [Gemmata obscuriglobus UQM
2246]
Length = 738
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 56/444 (12%), Positives = 111/444 (25%), Gaps = 48/444 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + + I D G G
Sbjct: 162 GGQGNDVLTCGAGNDYASGSDGNDLLIGGTGNDFLAGGAGDDAFDPGTGTD--------- 212
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G+ + + + + + T D+ V+
Sbjct: 213 -TLTGGTGWDRLSIAARAAGAEVQNTQVVFRQVTATGF---GSVVETVGCPDVETVELWG 268
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA Y V + +GG D+L+ GG N ++ + G
Sbjct: 269 GAENNRFDAIGYTGTVMFHGGAGADWLRGTGGGDVLN----GGEGNDTLSGEGNFDILNG 324
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N + +++ G GND + G + N+ +GND G +G D A +
Sbjct: 325 GAGNDALYGGDGNDNLDGGDGNDALYGGAGNDTLTGGAGNDGLYGGAGFDRVAENARYAV 384
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS---------------------- 353
+ + + D ++++E + ++
Sbjct: 385 VYVGADAVRSYFWQGAFMEFDPITEMEVVAVTGGAENNWFSANGYTGSVEFRGGAGNDTL 444
Query: 354 -VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSY 408
+ L A + L IG D+ G D F D L G
Sbjct: 445 LAGTSGDAALFGDAGNDTLGGGIGFDLLRGGAGNDTLTGGAGNDRLFGEGDDDTLSGGFG 504
Query: 409 DDLRNVFGSDRGAA---ARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFADAPDLVQ 464
+D+ + + ++ G ++ + + S D + +
Sbjct: 505 NDVLDGGDGNDVLGAVVTVGGLSGGWRQYTFADEPGDDVLRGGSGNDTARGGSGNDVIEG 564
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLY 488
+ R DS Y
Sbjct: 565 GSGNDTLGAVLVNVRRTNNDSIYY 588
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/392 (14%), Positives = 84/392 (21%), Gaps = 51/392 (13%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ ++ G+D L GG + G N I
Sbjct: 101 GNDSFSNETDIPAYADGGNGND----DLRGGSAADTLTGGAGDDYLNGGAGNDAIDGGAD 156
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---- 323
+ + G GNDV+ + N+ S GND+ G +G D A + +
Sbjct: 157 NDIIHGGQGNDVLTCGAGNDYASGSDGNDLLIGGTGNDFLAGGAGDDAFDPGTGTDTLTG 216
Query: 324 -------------------AIIVYDANEHKQDFLSDVERLRFAD---------------- 348
V F S VE + D
Sbjct: 217 GTGWDRLSIAARAAGAEVQNTQVVFRQVTATGFGSVVETVGCPDVETVELWGGAENNRFD 276
Query: 349 -----QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ L T + L G D +F G D +
Sbjct: 277 AIGYTGTVMFHGGAGADWLRGTGGGDVLNGGEGNDTLSGEGNFDILNGGAGNDALYGGDG 336
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL-INAFADAPDL 462
N G F + A + + + A A
Sbjct: 337 NDNLDGGDGNDALYGGAGNDTLTGGAGNDGLYGGAGFDRVAENARYAVVYVGADAVRSYF 396
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYL--YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
Q F E VT + + + F G T G
Sbjct: 397 WQGAFMEFDPITEMEVVAVTGGAENNWFSANGYTGSVEFRGGAGNDTLLAGTSGDAALFG 456
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L + L + AG D
Sbjct: 457 DAGNDTLGGGIGFDLLRGGAGNDTLTGGAGND 488
>gi|288959389|ref|YP_003449730.1| hypothetical protein AZL_025480 [Azospirillum sp. B510]
gi|288911697|dbj|BAI73186.1| hypothetical protein AZL_025480 [Azospirillum sp. B510]
Length = 339
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 54/155 (34%), Gaps = 35/155 (22%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-------------------- 520
+ F++ YL D+ + A H+ T G KEGR
Sbjct: 4 IDFNAKRYLDENPDVADAVQKGLITAWEHFRTAGQKEGRAAYDSSGMPVQADLIADQTGP 63
Query: 521 ------PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS------ITFN 568
P F Y+ ++ D+ +A H+ + G +EGR+ +F+
Sbjct: 64 KPAAPAPKDFNEAAYLKANPDVADAVQKGMIT---AYGHWESSGRKEGRTGAYAVDPSFD 120
Query: 569 PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
YL + D+ + A +HYI G E R
Sbjct: 121 AAYYLKTNPDVAAAVKRGETTAEEHYILAGKAEKR 155
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 73/204 (35%), Gaps = 23/204 (11%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ + Y D+ + + + + +HF G EGR +DS D + +
Sbjct: 1 MTQIDFNAKRYLDENPDVADAVQKGLITAWEHFRTAGQKEGRA-AYDSSGMPVQADLIAD 59
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
G A A P F Y+ ++ D+ +A + H+ +
Sbjct: 60 QTGPKPAAPA-------------PKDFNEAAYLKANPDVADAVQKG---MITAYGHWESS 103
Query: 474 GCEEGRF------VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
G +EGR +FD+ YL + D+ A HYI G E R+ A A
Sbjct: 104 GRKEGRTGAYAVDPSFDAAYYLKTNPDVAAAVKRGETTAEEHYILAGKAEKRSASAPAAP 163
Query: 528 EYIASHEDLINAFADAPDLVQAGK 551
+D++ A A D V +G
Sbjct: 164 PPKPLRDDVLQAIAQQADHVDSGL 187
>gi|288560323|ref|YP_003423809.1| glycosyl transferase GT4 family [Methanobrevibacter ruminantium M1]
gi|288543033|gb|ADC46917.1| glycosyl transferase GT4 family [Methanobrevibacter ruminantium M1]
Length = 1012
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 91/270 (33%), Gaps = 63/270 (23%)
Query: 380 FESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG--- 434
+++ H+ E G +G + + F++ Y D++ HY+ +G E
Sbjct: 100 SKALMHYLEKGYKKGYNPSIKFNAEEYYEVRPDVKRA----DVNPLVHYLKYGKIEVTSM 155
Query: 435 ------------RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+N + F Y+ + H+ G ++G +
Sbjct: 156 TENLNLKEYQLVKNSNLFDYNYYMEKN-------HLDLRNETEAIYHYLEIGYKKGYNPS 208
Query: 483 --FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR---------------NPDAFK 525
F+ +Y D+ + HY+ +G KE R F
Sbjct: 209 NKFNGEIYFKKNPDIEESGWN----PLVHYLKYGQKEERTDKCDKNLKEYSLVKESGLFD 264
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVF 583
Y + DL + + G H+ FGY+ G S F+ + YL Y ++
Sbjct: 265 YQFYKDKY-DL------DLNSYKRGLIHYLEFGYKRGYKPSRNFDGEEYLKRYPEVKKA- 316
Query: 584 GSDRSAAAQHYITHGMKEGRALGISGMQFK 613
HY+ +G+ E R +G+ + FK
Sbjct: 317 ---GFNPLVHYLKYGVNEER-IGLRRISFK 342
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 71/246 (28%), Gaps = 72/246 (29%)
Query: 420 GAAARHYITHGVKEG-RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+Y +KEG ++ F Y+ + D+ + + H+ G +E
Sbjct: 10 ITFVANYFWTSIKEGSKSNSYFNYDNYLKKYPDVKESGMNP-------FKHYLLHGIDEE 62
Query: 479 RFVTFDS---YLYLGSYDDL---------RNVFGSDRGAAARHYITHGVKEGRNPD-AFK 525
R FD L DL N+ A HY+ G K+G NP F
Sbjct: 63 RSTNFDENINSYSLVENSDLFDYEYYCEKNNLKFDSYSKALMHYLEKGYKKGYNPSIKFN 122
Query: 526 ALEYIASHEDLINAFAD------------------------------------------- 542
A EY D+ A +
Sbjct: 123 AEEYYEVRPDVKRADVNPLVHYLKYGKIEVTSMTENLNLKEYQLVKNSNLFDYNYYMEKN 182
Query: 543 --APDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
H+ GY++G + + FN ++Y D+ HY+ +G
Sbjct: 183 HLDLRNETEAIYHYLEIGYKKGYNPSNKFNGEIYFKKNPDI----EESGWNPLVHYLKYG 238
Query: 599 MKEGRA 604
KE R
Sbjct: 239 QKEERT 244
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 20/111 (18%)
Query: 510 YITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
Y +KEG ++ F Y+ + D+ + P H+ G +E RS F+
Sbjct: 16 YFWTSIKEGSKSNSYFNYDNYLKKYPDVKES-GMNP------FKHYLLHGIDEERSTNFD 68
Query: 569 P---DLYLTSYDDL---------WNVFGSDRSAAAQHYITHGMKEGRALGI 607
L DL N+ S A HY+ G K+G I
Sbjct: 69 ENINSYSLVENSDLFDYEYYCEKNNLKFDSYSKALMHYLEKGYKKGYNPSI 119
Score = 40.2 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 8/80 (10%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL----GISGMQFKSVMNLS 619
+ FN D YL Y D+ +HY+ HG+ E R+ I+ +L
Sbjct: 28 NSYFNYDNYLKKYPDVK----ESGMNPFKHYLLHGIDEERSTNFDENINSYSLVENSDLF 83
Query: 620 EKSRDKADLSLSFDHKKVDL 639
+ +L FD L
Sbjct: 84 DYEYYCEKNNLKFDSYSKAL 103
>gi|119484363|ref|ZP_01618980.1| beta-lactamase, putative [Lyngbya sp. PCC 8106]
gi|119457837|gb|EAW38960.1| beta-lactamase, putative [Lyngbya sp. PCC 8106]
Length = 1543
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 59/206 (28%), Gaps = 26/206 (12%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDL--------------TLIGGVKNYIDLNTESWSS 252
+ I+ + G+D +D + G N + S
Sbjct: 1275 MEGNDNIYSQDGDDLIFGNQGNDHIDTGLGNDSIYGGKNNDAVWGQDGNDMIWGNLDSDS 1334
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N +I + + G G D + G+ N+V GND G+ G D
Sbjct: 1335 LMGSSGNDSIYGGQEDDYLWGGLGEDWLFGDIGNDVVSGGDGNDNVFGNKGND------- 1387
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDL 371
+++ ++ ++ + + L F + + L + L
Sbjct: 1388 ----ELFGNSGNDTIFAGKDNDSICGGNDQDLLFGNLGADLIRGGEGNDSLYGGQENDTL 1443
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDI 397
G D+ EG D
Sbjct: 1444 TGGNGNDLISGDLGNDLLIGGEGEDT 1469
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/253 (13%), Positives = 72/253 (28%), Gaps = 18/253 (7%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ +NT G +N I + ++ G GND + +++
Sbjct: 1231 TIPEITPNPNSVVQTINTADSEPTLGTVENDEIRGDINVNTLFGMEGNDNIYSQDGDDLI 1290
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
F + GND D G D+ + ++ + +++ + L +
Sbjct: 1291 FGNQGNDHIDTGLGNDSIY--GGKNNDAVWGQDGNDMIWGNLDSD--------SLMGSSG 1340
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
++ L + L IG DV ++G D F + D
Sbjct: 1341 NDSIYGGQEDDYLWGGLGEDWLFGDIGNDVVSGGDGNDNVFGNKGNDELFGNSG----ND 1396
Query: 410 DLRNVFGSDRGAAARH----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ +D + G R + +L ++ L + +
Sbjct: 1397 TIFAGKDNDSICGGNDQDLLFGNLGADLIRGGEGNDSLYGGQENDTLTGGNGNDLISGDL 1456
Query: 466 GKDHFSNFGCEEG 478
G D E+
Sbjct: 1457 GNDLLIGGEGEDT 1469
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/258 (16%), Positives = 78/258 (30%), Gaps = 15/258 (5%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E + + + + N + G I S + I
Sbjct: 1234 EITPNPNSVVQTINTADSEPTLGTVENDEIRGDINVNTLFGMEGNDNIYSQDGDDLIFGN 1293
Query: 132 LGLMHPGSYNGGYPVYGVDNDYE------NDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
G H + G +YG N+ ND ++ S + S D+ +G +
Sbjct: 1294 QGNDHIDTGLGNDSIYGGKNNDAVWGQDGNDMIWGNLDSDSLMGSSGNDSIYGGQEDDYL 1353
Query: 186 SDIVAVQKIYG--APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+ ++G G + + ++ + G+D + G N
Sbjct: 1354 WGGLGEDWLFGDIGNDVVSGGD---GNDNVFGNKGNDELFGNSGNDTI----FAGKDNDS 1406
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ G I +S+ G ND + G + N++ GND+ G G
Sbjct: 1407 ICGGNDQDLLFGNLGADLIRGGEGNDSLYGGQENDTLTGGNGNDLISGDLGNDLLIGGEG 1466
Query: 304 LDTFFYYAPSYLYKIYRF 321
DTF + + +I F
Sbjct: 1467 EDTFLISSTTEKDRIADF 1484
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 30/241 (12%), Positives = 63/241 (26%), Gaps = 27/241 (11%)
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+V L + + + ++ + + +G D K+ +G D+ +
Sbjct: 1268 NVNTLFGMEGNDNIYSQDGDDLIFGNQGNDHIDTGLGNDSIYGGKNNDAVWGQDGNDMIW 1327
Query: 400 DSYLYLGSYDDLRNVFGSDRGAA--ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
+ D L G+D Y+ G+ E L ++ +
Sbjct: 1328 GNL----DSDSLMGSSGNDSIYGGQEDDYLWGGLGE-------DWLFGDIGNDVVSGGDG 1376
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ G D + F D+ G+D+ + G
Sbjct: 1377 NDNVFGNKGNDELFGNSGNDTIFAGKDNDSI---------CGGNDQDLL---FGNLGADL 1424
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD 577
R + +L ++ L + G D G E + +
Sbjct: 1425 IRGGEGNDSLYGGQENDTLTGGNGNDLISGDLGND--LLIGGEGEDTFLISSTTEKDRIA 1482
Query: 578 D 578
D
Sbjct: 1483 D 1483
>gi|253999691|ref|YP_003051754.1| putative rhizobiocin/RTX toxin and hemolysin-type calcium-binding
protein [Methylovorus sp. SIP3-4]
gi|253986370|gb|ACT51227.1| putative rhizobiocin/RTX toxin and hemolysin-type calcium binding
protein [Methylovorus sp. SIP3-4]
Length = 1905
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 64/524 (12%), Positives = 138/524 (26%), Gaps = 53/524 (10%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
T + + D G G T + + A Y+
Sbjct: 1185 TLYGLAGNDTLTGGNGADILDGGAGNDTMAGGAGNDTYYVDSTSDVVTEASSAGTDLVYS 1244
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP------------MVSDIV 189
+ + + T+ ++ + + + +T +DI+
Sbjct: 1245 TITYTLTTNVENLTLTGTTAGLTGTGNTLANVLTANSAGSTLYGLTGNDTLIGGAGNDIL 1304
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
G G++ Y ++ + + TL V+N T +
Sbjct: 1305 DGGGGNDTMTGGAGDDTYYVDSTSDVVTEASSAGTDLIYSTVSYTLSTNVENLTLTGTTA 1364
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G ++ + ++ ++ G +GND +IG + + +G D G G DT++
Sbjct: 1365 SLTATGNTQDNILTANSAGSTLSGLAGNDTLIGGAGADTLNGGTGADSMAGGLGNDTYYV 1424
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASY 368
+ +VY + + ++VE L + +++ +
Sbjct: 1425 DDAGDVVTEASSAGTDLVYASITYTLAAGNNVENLTLTGSSNLNGTGNELDNVITGNSGA 1484
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
L G D + G D + +G + G+D A+ Y
Sbjct: 1485 NTLSGGAGNDTLDGGTGADTMLGGTGNDTYYVDN--VGDVVTEASSAGTDLVYASITYTL 1542
Query: 429 HGVKEGRNPDAFKALEYIASHEDLIN----AFADAPDLVQVGKDHFSNFGCEEGRFVTF- 483
N + + +L N G D + +
Sbjct: 1543 AAGNNVENLTLTGSSNLNGTGNELDNVITGNSGANTLSGGAGNDTLNGGTGADTMLGGTG 1602
Query: 484 DSYLYLGSYDDLRNVF---GSDRGAAARHYITHGVKEGRNPDA----------------- 523
+ Y+ + D+ + G+D +++ Y E
Sbjct: 1603 NDTYYVDNVGDVVTEYASEGTDLVSSSVSYTLGANVENLTLSGSTAGLTATGNTLDNVLT 1662
Query: 524 -------------FKALEYIASHEDLINAFADAPDLVQAGKDHF 554
L A ++ L AG D +
Sbjct: 1663 ANSAGSTLYGLAGNDTLTGGAGNDILDGGTGADTMAGGAGNDTY 1706
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 61/518 (11%), Positives = 129/518 (24%), Gaps = 31/518 (5%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
T + + D G G T + + A
Sbjct: 1285 TLYGLTGNDTLIGGAGNDILDGGGGNDTMTGGAGDDTYYVDSTSDVVTEA--SSAGTDLI 1342
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
Y + + EN + + S ++ + A +S + + G
Sbjct: 1343 YSTVSYTLSTNVENLTLTGTTASLTATGNTQDNILTANSAGSTLSGLAGNDTLIGGAGAD 1402
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL------NTESWSSIGG 255
N + D GD + + + G Y + +
Sbjct: 1403 TLNGGTGADSMAGGLGNDTYYVDDAGDVVTEASSAGTDLVYASITYTLAAGNNVENLTLT 1462
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N+ + + + G+SG + + G + N+ +G D G +G DT++ +
Sbjct: 1463 GSSNLNGTGNELDNVITGNSGANTLSGGAGNDTLDGGTGADTMLGGTGNDTYYVDNVGDV 1522
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQV 374
+VY + + ++VE L + +++ + L
Sbjct: 1523 VTEASSAGTDLVYASITYTLAAGNNVENLTLTGSSNLNGTGNELDNVITGNSGANTLSGG 1582
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D G D + +G G+D +++ Y E
Sbjct: 1583 AGNDTLNGGTGADTMLGGTGNDTYYVDN--VGDVVTEYASEGTDLVSSSVSYTLGANVEN 1640
Query: 435 RNPDAF------------KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
L ++ L + G D +
Sbjct: 1641 LTLSGSTAGLTATGNTLDNVLTANSAGSTLYGLAGNDTLTGGAGNDILDGGTGADTMAGG 1700
Query: 483 F-DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
+ Y+ S D+ ++ + ++
Sbjct: 1701 AGNDTYYVDSTSDVVTEAAGAGTDLICTSVSC------TLADNVENGTLLNNVSAQTLTG 1754
Query: 542 DAPDLV-QAGKDHFSNFGYEEGRSITFNPDLYLTSYDD 578
+ D V + + G + FN YL++ D
Sbjct: 1755 NTLDNVLTSSTYADTLIGGLGNDKMVFNSSNYLSAIAD 1792
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/352 (11%), Positives = 87/352 (24%), Gaps = 31/352 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ ++ N +S D G G T+ + LG
Sbjct: 1360 TGTTASLTATGNTQDNILTANSAGSTLSGLAGNDTLIGGAGADTLNGGTGADSMAGGLGN 1419
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G V + + + + + + G + +
Sbjct: 1420 DTYYVDDAGDVVTEASSAGTDLVYASITYTLAAGNNVENLTLTGSSNLNGTGNELDNVIT 1479
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ +L T+ G+D + +G V
Sbjct: 1480 GNSGANTLSGGA--GNDTLDGGTGADTMLGGTGNDTYYVDNVGDVVTEASSAGTDLVYAS 1537
Query: 255 ----------------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
N+ + + + G+SG + + G + N+ +G D
Sbjct: 1538 ITYTLAAGNNVENLTLTGSSNLNGTGNELDNVITGNSGANTLSGGAGNDTLNGGTGADTM 1597
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-------- 350
G +G DT++ + + + + ++ ++VE L +
Sbjct: 1598 LGGTGNDTYYVD--NVGDVVTEYASEGTDLVSSSVSYTLGANVENLTLSGSTAGLTATGN 1655
Query: 351 ---IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
S L A + L G D+ + G D +
Sbjct: 1656 TLDNVLTANSAGSTLYGLAGNDTLTGGAGNDILDGGTGADTMAGGAGNDTYY 1707
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 64/520 (12%), Positives = 130/520 (25%), Gaps = 60/520 (11%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
T + + D G+G T + +
Sbjct: 990 AGNDTLTGGAGNDILDGGTGTDTMAGGLGNDTYYVDSTGDVVTE--NAAEGTDLVASSIS 1047
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS----- 201
Y + + EN + + +++ + A + + + G
Sbjct: 1048 YTLGANLENLTLTGTTAGLTGTGNTLDNVLTANSAGSSLYGLAGNDTLTGGAGNDILDGG 1107
Query: 202 ---------LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
GN+ Y ++ + + T+ V+N T + S
Sbjct: 1108 AGTDTMAGGAGNDTYYVDNTADTITEAASAGTDLVYSTVTYTISANVENLTLTGTTAGLS 1167
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + ++ ++ G +GND + G + ++ +GND G +G DT++ +
Sbjct: 1168 GTGNTLDNVLVANSAGSTLYGLAGNDTLTGGNGADILDGGAGNDTMAGGAGNDTYYVDST 1227
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-----------CIDSVNVKQRSI 361
S + +A + ++VE L S
Sbjct: 1228 S--DVVTEASSAGTDLVYSTITYTLTTNVENLTLTGTTAGLTGTGNTLANVLTANSAGST 1285
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L + LI G D+ + G D + + G+D
Sbjct: 1286 LYGLTGNDTLIGGAGNDILDGGGGNDTMTGGAGDDTYYVDS--TSDVVTEASSAGTDLIY 1343
Query: 422 AARHYITHGVKEGRNPDAFKA------------LEYIASHEDLINAFADAPDLVQVGKDH 469
+ Y E A L ++ L + + G D
Sbjct: 1344 STVSYTLSTNVENLTLTGTTASLTATGNTQDNILTANSAGSTLSGLAGNDTLIGGAGADT 1403
Query: 470 FSNFGCEEGRFVTF-DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG---------- 518
+ + + Y+ D+ S IT+ + G
Sbjct: 1404 LNGGTGADSMAGGLGNDTYYVDDAGDVVTEASSAGTDLVYASITYTLAAGNNVENLTLTG 1463
Query: 519 ---RNPDAFKALEYIASH---EDLINAFADAPDLVQAGKD 552
N + I + L + G D
Sbjct: 1464 SSNLNGTGNELDNVITGNSGANTLSGGAGNDTLDGGTGAD 1503
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 59/510 (11%), Positives = 122/510 (23%), Gaps = 46/510 (9%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE 72
A+ +L ++ + + D+ N + ++ V ++
Sbjct: 399 AANDILDGGTGADTMVGAAGNDTYYVDNVGDVVTENAGQGTDLVLSSISYTLVSNVE-NL 457
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T + + N +S D G G + + L
Sbjct: 458 TLTGTTAGLTGTGNTLDNVLTANSAGSSLYGLAGNDTLTGGAGNDIMDGGTGTDTMAGGL 517
Query: 133 GLM---HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
G S + D + ++ + + +++
Sbjct: 518 GDDTYYVDDSADTISEASNAGADQVYSTVSYTLSGNVENLTLTGTTAGLTGTGNSLDNVL 577
Query: 190 AVQKIYGAPKGSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY---- 242
+ G GN+ T+ GDD+ + +G +
Sbjct: 578 TANSAGSSLYGLAGNDTLTGGAGNDILDGGTGTDTMAGGAGDDIYYVDNVGDAVSENAAE 637
Query: 243 -IDLNTESWSSI-------------------GGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
DL + S S G + + + ++ G +GND + G
Sbjct: 638 GTDLVSSSISYTLVANVENLTLTGTTTGLIGTGNSLDNVLVANAAGSTLYGLAGNDTLTG 697
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ ++ +G D G +G DT++ + + +++VE
Sbjct: 698 GAGADILDGGTGTDAMAGGAGDDTYYVD--DVGDGVSESGAEGTDLVLSSISYTLVANVE 755
Query: 343 RLRFADQCIDSVNVKQR-----------SILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
L S L A + L G D+ +
Sbjct: 756 NLTLTGTTAGLAGTGNTQDNVLVANSAGSSLYGLAGNDTLTGGAGADILDGGTGTDTMAG 815
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
G D + + GSD+ + Y E +
Sbjct: 816 GAGDDTYYVDDS--ADTITEASNAGSDQVFSTVSYTLSNNVENLTLTGTTTGLTATGNSL 873
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
A+A G G +
Sbjct: 874 DNILVANAVGSSLYGLAGNDTLTGGAGNDI 903
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 61/467 (13%), Positives = 113/467 (24%), Gaps = 48/467 (10%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
T + + D G G T ++ I A
Sbjct: 790 AGNDTLTGGAGADILDGGTGTDTMAGGAGDDTYYVDDSADTITEASNAGS--DQVFSTVS 847
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
Y + N+ EN + + +S+ + + + + G GN+I
Sbjct: 848 YTLSNNVENLTLTGTTTGLTATGNSLDNILVANAVGSSLYGLAGNDTLTGG----AGNDI 903
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
DD D + + ++ +N+T+ T
Sbjct: 904 LDGGTGTDAMAGGLGNDTYYVDDSADTITEASNAGTDQVFSTVSYTLANNVENLTLTGTT 963
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------------FYY 310
+ G++ ++++ NSA + + +GND G +G D YY
Sbjct: 964 AGLTGTGNTLDNMLTANSAGSSMYGLAGNDTLTGGAGNDILDGGTGTDTMAGGLGNDTYY 1023
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-----------CIDSVNVKQR 359
S + A+ +++E L
Sbjct: 1024 VDSTGDVVTENAAEGTDLVASSISYTLGANLENLTLTGTTAGLTGTGNTLDNVLTANSAG 1083
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
S L A + L G D+ + G D + G+D
Sbjct: 1084 SSLYGLAGNDTLTGGAGNDILDGGAGTDTMAGGAGNDTYYVDN--TADTITEAASAGTDL 1141
Query: 420 GAAARHYITHGVKE------------GRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
+ Y E G L ++ L + G
Sbjct: 1142 VYSTVTYTISANVENLTLTGTTAGLSGTGNTLDNVLVANSAGSTLYGLAGNDTLTGGNGA 1201
Query: 468 DHFSNFGCEEGRFVTF-DSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
D + + Y+ S D+ S IT+
Sbjct: 1202 DILDGGAGNDTMAGGAGNDTYYVDSTSDVVTEASSAGTDLVYSTITY 1248
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 59/415 (14%), Positives = 104/415 (25%), Gaps = 53/415 (12%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+YGA + + + + D+ GD + + G ++
Sbjct: 390 AGNDTLYGAAANDILDGGTGADTMVGAAGNDTYYVDNVGDVVTENAGQGTDLVLSSISYT 449
Query: 249 SWSSI-----GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
S++ G +T +T+ + +S + G + N+ +GND+ DG +G
Sbjct: 450 LVSNVENLTLTGTTAGLTGTGNTLDNVLTANSAGSSLYGLAGNDTLTGGAGNDIMDGGTG 509
Query: 304 LDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ------- 349
DT YY I NA + +VE L
Sbjct: 510 TDTMAGGLGDDTYYVDDSADTISEASNAGADQVYSTVSYTLSGNVENLTLTGTTAGLTGT 569
Query: 350 ----CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
S L A + L G D+ + G DI + +
Sbjct: 570 GNSLDNVLTANSAGSSLYGLAGNDTLTGGAGNDILDGGTGTDTMAGGAGDDIYYVDN--V 627
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNP------------DAFKALEYIASHEDLI 453
G G+D +++ Y E L A+ L
Sbjct: 628 GDAVSENAAEGTDLVSSSISYTLVANVENLTLTGTTTGLIGTGNSLDNVLVANAAGSTLY 687
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTF-DSYLYLGSYDD------------LRNVFG 500
+ G D + D Y+ D + +
Sbjct: 688 GLAGNDTLTGGAGADILDGGTGTDAMAGGAGDDTYYVDDVGDGVSESGAEGTDLVLSSIS 747
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASH---EDLINAFADAPDLVQAGKD 552
A + G G + ++ L + AG D
Sbjct: 748 YTLVANVENLTLTGTTAGLAGTGNTQDNVLVANSAGSSLYGLAGNDTLTGGAGAD 802
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 70/530 (13%), Positives = 137/530 (25%), Gaps = 72/530 (13%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
T + + D G G N + +
Sbjct: 590 AGNDTLTGGAGNDILDGGTGTDTMAGGAGDDIYYVDNVGDAV--SENAAEGTDLVSSSIS 647
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
Y + + EN + + +S+ + A + + + G + +
Sbjct: 648 YTLVANVENLTLTGTTTGLIGTGNSLDNVLVANAAGSTLYGLAGNDTLTGGAGADILDGG 707
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + D GD ++ G + L++ S++ + +N+T+ T
Sbjct: 708 TGTDAMAGGAGDDTYYVDDVGD---GVSESGAEGTDLVLSSISYTLV-ANVENLTLTGTT 763
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------------FYY 310
+ G++ ++V++ NSA + + +GND G +G D YY
Sbjct: 764 AGLAGTGNTQDNVLVANSAGSSLYGLAGNDTLTGGAGADILDGGTGTDTMAGGAGDDTYY 823
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-----------CIDSVNVKQR 359
I NA + ++VE L V
Sbjct: 824 VDDSADTITEASNAGSDQVFSTVSYTLSNNVENLTLTGTTTGLTATGNSLDNILVANAVG 883
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
S L A + L G D+ + G D + + G+D+
Sbjct: 884 SSLYGLAGNDTLTGGAGNDILDGGTGTDAMAGGLGNDTYYVDDS--ADTITEASNAGTDQ 941
Query: 420 GAAARHYITHGVKEGRNPDAFKA------------LEYIASHEDLINAFADAPDLVQVGK 467
+ Y E A L ++ + + G
Sbjct: 942 VFSTVSYTLANNVENLTLTGTTAGLTGTGNTLDNMLTANSAGSSMYGLAGNDTLTGGAGN 1001
Query: 468 DHFSNFGCEEGRFVTF-DSYLYLGSYDDLR---NVFGSDRGAAARHYITHGVKEGRNPDA 523
D + + Y+ S D+ G+D A++ Y E
Sbjct: 1002 DILDGGTGTDTMAGGLGNDTYYVDSTGDVVTENAAEGTDLVASSISYTLGANLENLTLTG 1061
Query: 524 F---------------------KALEYIASHEDLINAFADAPDLVQAGKD 552
+L +A ++ L + AG D
Sbjct: 1062 TTAGLTGTGNTLDNVLTANSAGSSLYGLAGNDTLTGGAGNDILDGGAGTD 1111
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 80/296 (27%), Gaps = 13/296 (4%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + +TE + ++ ++ ++ E ++ + N
Sbjct: 1512 DTYYVDNVGDVVTEASSAGTDLVYASI-TYTLAAGNNVENLTLTGSSNLNGTGNELDNVI 1570
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+S D G G T+L + D
Sbjct: 1571 TGNSGANTLSGGAGNDTLNGGTGADTMLGGTGNDTY------YVDNVGDVVTEYASEGTD 1624
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI--- 209
+ S ++ + + + +++ G GN+
Sbjct: 1625 LVSSSVSYTLGANVENLTLSGSTAGLTATGNTLDNVLTANSAGSTLYGLAGNDTLTGGAG 1684
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G+D + V + + + + T+A +
Sbjct: 1685 NDILDGGTGADTMAGGAGNDTYYVDSTSDVVTE---AAGAGTDLICTSVSCTLADNVENG 1741
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+++ + + GN+ +NV S+ D G G D + + +YL I +
Sbjct: 1742 TLLNNVSAQTLTGNTLDNVLTSSTYADTLIGGLGNDKMVFNSSNYLSAIADGGSGT 1797
>gi|291571624|dbj|BAI93896.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 802
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 64/205 (31%), Gaps = 12/205 (5%)
Query: 225 SGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
G+D + + G + ++ G + + I + + + G++GND+
Sbjct: 42 GSGNDTVRSLVDPTLIYGNQGDDQIFGGGGNDTLYGGQGDDYIEGNAGDDLIFGNAGNDI 101
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G N+ F GNDV DG G + + I E +++ F
Sbjct: 102 LSGGLGNDTIFGGPGNDVIDGDGGNNLIY--GGQGADIIRGGEGNDLIFGDAGENTIFGG 159
Query: 340 DVERLRFADQCID-SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ D ++ + + G D EG +I
Sbjct: 160 PGNDTLYGGIDDDQIGGGLGNDLIFGGLGDDIISGGEGDDTIYGGLGNDLILADEGNNIL 219
Query: 399 F----DSYLYLGSYDDLRNVFGSDR 419
F + L G+ +D + D
Sbjct: 220 FGNAGSNTLVGGTGNDTFVLEAGDG 244
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 53/244 (21%), Gaps = 10/244 (4%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + ++V ++ GN ++ F GND G G D + + I+
Sbjct: 37 LGVFLGSGNDTVRSLVDPTLIYGNQGDDQIFGGGGNDTLYGGQGDD--YIEGNAGDDLIF 94
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
I+ + + +++ + + G D+
Sbjct: 95 GNAGNDILSGGLGNDT--------IFGGPGNDVIDGDGGNNLIYGGQGADIIRGGEGNDL 146
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
G D + L N G
Sbjct: 147 IFGDAGENTIFGGPGNDTLYGGIDDDQIGGGLGNDLIFGGLGDDIISGGEGDDTIYGGLG 206
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
+ + L + G D F + D D +
Sbjct: 207 NDLILADEGNNILFGNAGSNTLVGGTGNDTFVLEAGDGFTTADTDQIFDFTPGQDTILLL 266
Query: 500 GSDR 503
G
Sbjct: 267 GDVP 270
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 62/237 (26%), Gaps = 45/237 (18%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D I N G D G I + + LG
Sbjct: 53 DPTLIYGNQGD-DQIFGGGGNDTLYGGQGDDYIEGNAGDDLIFGNAGNDILSGGLGNDTI 111
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G + G + GA
Sbjct: 112 FGGPGNDVIDGDGGNNLIYGGQ------------------------------------GA 135
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G + TI+ G+D L GG+ + I G
Sbjct: 136 DIIRGG----EGNDLIFGDAGENTIFGGPGNDTL----YGGIDDDQIGGGLGNDLIFGGL 187
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ I+ +++ G GND+++ + NN+ F ++G++ G +G DTF A
Sbjct: 188 GDDIISGGEGDDTIYGGLGNDLILADEGNNILFGNAGSNTLVGGTGNDTFVLEAGDG 244
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 25/226 (11%), Positives = 48/226 (21%), Gaps = 21/226 (9%)
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + L D + L + + G D+
Sbjct: 38 GVFLGSGNDTVRSLVDPTLIYGNQGDDQIFGGGGNDTLYGGQGDDYIEGNAGDDLIFGNA 97
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G D F G +D+ + G G +
Sbjct: 98 GNDILSGGLGNDTIFG-----GPGNDVIDGDG-------------GNNLIYGGQGADIIR 139
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
++ + + G D ++ + L G D G
Sbjct: 140 GGEGNDLIFGDAGENTIFGGPGNDTLYGGIDDDQIGGGLGNDLIFGGLGDDIISGGEGDD 199
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
Y G + L A L+ + +++AG
Sbjct: 200 TI---YGGLGNDLILADEGNNILFGNAGSNTLVGGTGNDTFVLEAG 242
>gi|300692780|ref|YP_003753775.1| rtx family calcium-binding cytotoxins and bacteriocins protein
[Ralstonia solanacearum PSI07]
gi|299079840|emb|CBJ52517.2| putative rtx family calcium-binding cytotoxins and bacteriocins
protein [Ralstonia solanacearum PSI07]
Length = 1253
Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/344 (13%), Positives = 84/344 (24%), Gaps = 60/344 (17%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ S+ G E N A + +GND++ G + N+ +G+DV G G D
Sbjct: 659 AASATSGTENNDAFAGDAGANTFNAGAGNDLLDGQAGNDNLSGGAGDDVIYGGDGNDI-- 716
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
L+ D L A
Sbjct: 717 -----------------------------------LQGNDGADTLDGGTGDDTLYGGAGN 741
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L G D + +G F + Y S L + D + + +T
Sbjct: 742 DTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFINSDYDTSAGKLNVLQFKDGVSPSEVIVT 801
Query: 429 HGVKEGRNPDAFKALEYIA-----------SHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ A + A + + + ++
Sbjct: 802 RSGSDLVLSIAGTTDKITANMVFYWDDTANPYNPVQQVKFSDGTTWDLATIKAKALIGDD 861
Query: 478 GRFVTF-----DSYLYLGSYDDLRNVFGSDR----GAAARHYITHGVKEGRNPDAFKALE 528
D+ LG D++ G D Y G R L
Sbjct: 862 TAQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTIYGGEGNDTLRGGADNDNLY 921
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLY 572
++ L + + G D + + +G F Y
Sbjct: 922 GGNGNDVLDGGTGNDTLSGEGGNDTYL---FGKGDGQDFINSDY 962
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 61/527 (11%), Positives = 124/527 (23%), Gaps = 66/527 (12%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ ++ + + T + + D G G I + +
Sbjct: 662 ATSGTENNDAFAGDAGANTFNAGAGNDLLDGQAGNDNLSGGAGDDVIYGGDGNDILQGND 721
Query: 133 GLMHPGSYNGGYPVYGVDNDYEND--SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G G +YG + D + ++ + G D A
Sbjct: 722 GADTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFINSDYDTSA 781
Query: 191 -----VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+Q G + ++ + I + D +
Sbjct: 782 GKLNVLQFKDGVSPSEVIVTRSGSDLVLSIAGTTDKITANMVFYWDDTANPYNPVQQVKF 841
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + + + I T +++VG + D + N+ + G+DV DG +G D
Sbjct: 842 SDGTTWDLATIKAKALIGDDTA-QTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGND 900
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T + D L L
Sbjct: 901 TIY----------------------GGEGNDTLRG---------------GADNDNLYGG 923
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ L G D + +G F + Y S L + D + +
Sbjct: 924 NGNDVLDGGTGNDTLSGEGGNDTYLFGKGDGQDFINSDYDTSAGKLNVLQFKDGVSPSEV 983
Query: 426 YITHGVKEGRNPDAFKALEYIA-----------SHEDLINAFADAPDLVQVGKDHFSNFG 474
+T + A + A + + +
Sbjct: 984 IVTRSGSDLVLSIAGTTDKITANMVFYWDDTANPYNPVQQVKFSDGTTWDLATIKAKALI 1043
Query: 475 CEEGRFVTF-----DSYLYLGSYDDLRNVFGSDR----GAAARHYITHGVKEGRNPDAFK 525
++ D+ LG D++ G D Y G R
Sbjct: 1044 GDDTAQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTIYGGDGNDILRGGADND 1103
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFS-NFGYEEGRSITFNPDL 571
L ++ L + + G D + N G+ + ++
Sbjct: 1104 NLYGGNGNDILEGGTGNDYLSGENGSDTYLFNAGWGQDTVYNYDTSS 1150
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/280 (14%), Positives = 76/280 (27%), Gaps = 16/280 (5%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ T R + + DV G G T+
Sbjct: 891 DVLDGGAGNDTIYGGEGNDTLRGGADNDNLYGGNGNDVLDGGTGNDTLSGEGGNDTYLFG 950
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-IVA 190
G + + + S + +D I A
Sbjct: 951 KG-----DGQDFINSDYDTSAGKLNVLQFKDGVSPSEVIVTRSGSDLVLSIAGTTDKITA 1005
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYID---- 244
Y + N + +++ + + TI GDD + + I+
Sbjct: 1006 NMVFYWDDTANPYNPVQQVKFSDGTTWDLATIKAKALIGDDTAQTLVGYTEADTINALGG 1065
Query: 245 ----LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ G N TI + + G + ND + G + N++ +GND G
Sbjct: 1066 NDNVYGQGGDDVLDGGAGNDTIYGGDGNDILRGGADNDNLYGGNGNDILEGGTGNDYLSG 1125
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G DT+ + A +Y ++ + D +D
Sbjct: 1126 ENGSDTYLFNAGWGQDTVYNYDTSSGRSDIIAFGTGIAAD 1165
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/295 (12%), Positives = 87/295 (29%), Gaps = 19/295 (6%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ G + + G N + ++ G + I +
Sbjct: 661 SATSGTENNDAFAGDAGANTFN----AGAGNDLLDGQAGNDNLSGGAGDDVIYGGDGNDI 716
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+ G D + G + ++ + +GND DG +G DT + Y + + +
Sbjct: 717 LQGNDGADTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFINSD 776
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ L+ L+F D S ++ + + ++ + G + + F
Sbjct: 777 YDTSAGKLN---VLQFKDGVSPS------EVIVTRSGSDLVLSIAG--TTDKITANMVFY 825
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
+ + S + A + + + ++
Sbjct: 826 WDDTANPYNPVQQVKFSDGTT---WDLATIKAKALIGDDTAQTLVGYTEADTINALGGND 882
Query: 451 DLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
++ D G D + G + R + LY G+ +D+ + +
Sbjct: 883 NVYGQGGDDVLDGGAGNDTIYGGEGNDTLRGGADNDNLYGGNGNDVLDGGTGNDT 937
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 53/441 (12%), Positives = 101/441 (22%), Gaps = 86/441 (19%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ D I N T + D G G T+
Sbjct: 706 DVIYGGDGNDILQGNDGADTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFG 765
Query: 132 LGLMHPGSYNGGYPVYGVDN-----DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
G + G N D + S + S S+ + A +
Sbjct: 766 KGDGQDFINSDYDTSAGKLNVLQFKDGVSPSEVIVTRSGSDLVLSIAGTTDKITANMVFY 825
Query: 187 -DIVAVQKIYGAPKGSLGNNIYKIEV----QQKDSPFIQTIYDSGGDDLLDLTL-----I 236
D A + + QT+ D ++
Sbjct: 826 WDDTANPYNPVQQVKFSDGTTWDLATIKAKALIGDDTAQTLVGYTEADTINALGGNDNVY 885
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE----- 291
G + + +I G E N T+ +++ G +GNDV+ G + N+
Sbjct: 886 GQGGDDVLDGGAGNDTIYGGEGNDTLRGGADNDNLYGGNGNDVLDGGTGNDTLSGEGGND 945
Query: 292 ------SSGNDVFDG-----SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G D + + L+ + ++ + + + D ++
Sbjct: 946 TYLFGKGDGQDFINSDYDTSAGKLNVLQFKDGVSPSEVIVTRSGSDLVLSIAGTTDKITA 1005
Query: 341 ---------------VERLRFADQC----------------------------------- 350
V++++F+D
Sbjct: 1006 NMVFYWDDTANPYNPVQQVKFSDGTTWDLATIKAKALIGDDTAQTLVGYTEADTINALGG 1065
Query: 351 -IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ +L+ A + + G D+ G DI D
Sbjct: 1066 NDNVYGQGGDDVLDGGAGNDTIYGGDGNDILRGGADNDNLYGGNGNDILEGGTG----ND 1121
Query: 410 DLRNVFGSDRGAAARHYITHG 430
L GSD +
Sbjct: 1122 YLSGENGSDTYLFNAGWGQDT 1142
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/346 (12%), Positives = 76/346 (21%), Gaps = 40/346 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D T DV G G TI +
Sbjct: 859 GDDTAQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTIYGGEGNDTLRGGADND 918
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ NG + G + + F D + Y + ++ +Q
Sbjct: 919 NLYGGNGNDVLDGGTGNDTLSGEGGNDTYLFGKGDGQDFINSDYDTSAGKLNV--LQFKD 976
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + ++ + I + D + + + +
Sbjct: 977 GVSPSEVIVTRSGSDLVLSIAGTTDKITANMVFYWDDTANPYNPVQQVKFSDGTTWDLAT 1036
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ I T +++VG + D + N+ + G+DV DG +G DT +
Sbjct: 1037 IKAKALIGDDTA-QTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTIY------- 1088
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
D L + L
Sbjct: 1089 ------------------------------GGDGNDILRGGADNDNLYGGNGNDILEGGT 1118
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
G D + + G S FG+ A
Sbjct: 1119 GNDYLSGENGSDTYLFNAGWGQDTVYNYDTSSGRSDIIAFGTGIAA 1164
>gi|299068226|emb|CBJ39445.1| Putative calcium binding hemolysin protein (modular protein)
[Ralstonia solanacearum CMR15]
Length = 1944
Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats.
Identities = 64/444 (14%), Positives = 111/444 (25%), Gaps = 48/444 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
T + +D + + G G N G + +
Sbjct: 989 GGSGNDTLYGGNGNDTLEGGAGNDYLTGEGGSDTYVFNSGWGQDTIGNYDASSGRSDVIA 1048
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
V + S S + D + Y + I
Sbjct: 1049 FGDGIAASDIVATRSGEDLILSLRNSSDKVTVQYYFSGDGTGAYRVDLIRFADGTTWDIK 1108
Query: 196 GAPK-----GSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ +N+Y + + TI GG+D L G +
Sbjct: 1109 TVSAKTIGATNAADNLYGYATDDEINGLGGNDTIRGYGGNDTL----RGDAGADTLSGGD 1164
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
SI G N + T +S++G SGND + G + N+ SGND G G DT+
Sbjct: 1165 GNDSIDGGADNDYLYGETGDDSLLGGSGNDTLYGGNGNDTLEGGSGNDYLTGEGGSDTYV 1224
Query: 309 YYAPSYLYKIYRFENAI--------------IVYDANEHKQDFLSD-------------- 340
+ + I ++ + A +D +
Sbjct: 1225 FNSGWGQDTIGNYDASTGRSDVIEFGSGIAATDVIATRSGEDLILSIRNGSDRVTVQYYF 1284
Query: 341 ---------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
++++RFAD V + + T+ ++L DV +
Sbjct: 1285 SSDATSPYRIDQVRFADGTSWDVAAIKALVQVPTSGTDNLYGYASDDVLNGLDGNDALRG 1344
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
G D N Y G L A ++
Sbjct: 1345 YGGNDTLRGDAGADTLSGGDGNDSIDGGADNDYLYGEAGDDSLLGGSGNDTLYGGAGNDT 1404
Query: 452 LINAFADAPDLVQVGKDHFSNFGC 475
L + + G D +
Sbjct: 1405 LEGGSGNDYLTGEGGSDTYVFNSG 1428
Score = 81.0 bits (198), Expect = 7e-13, Method: Composition-based stats.
Identities = 67/444 (15%), Positives = 112/444 (25%), Gaps = 48/444 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
T S +D + + G G N G + +
Sbjct: 1389 GGSGNDTLYGGAGNDTLEGGSGNDYLTGEGGSDTYVFNSGWGQDTIGNYDTTTGRSDVIA 1448
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC------ATPMVSDIV 189
V + S S + DA+ Y A D+
Sbjct: 1449 FGDGIAASDIVATRSGEDLILSLRNSTDRVTVQYYFSSDATSPYRVDQVRFADGTSWDVA 1508
Query: 190 AVQKIYGAPKGSLGNNI-YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
AV+ + P N Y + TI GG+D L G +
Sbjct: 1509 AVKALVQVPTSGADNLYGYASDDVLNGLDGNDTIRGYGGNDTL----RGDAGADTLSGGD 1564
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S+ G N + T +S++G SGND + G + N+ SGND G G DT+
Sbjct: 1565 GNDSVDGGADNDYLYGETGDDSLLGGSGNDTLYGGAGNDTLEGGSGNDYLTGEGGSDTYV 1624
Query: 309 YYAPSYLYKIYRFENA--------------IIVYDANEHKQDFLSD-------------- 340
+ + I +++ A +D +
Sbjct: 1625 FNSGWGQDTIGNYDSTSGRSDVITFGDGIAATDVIATRSGEDLILSLRNSTDRVTVQYYF 1684
Query: 341 ---------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
++++RFAD V + + + ++L DV +
Sbjct: 1685 SSDATGPYRIDQVRFADGTSWDVAAVKALVQVPASGDDNLYGYASDDVLNGLAGNDTLRG 1744
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
G D + N Y G L ++
Sbjct: 1745 YGGNDTLRGDAGADTLFGGDGNDSIDGGADNDYLYGEAGDDSLLGGSGNDNLYGGNGNDT 1804
Query: 452 LINAFADAPDLVQVGKDHFSNFGC 475
L + G D +
Sbjct: 1805 LKGGAGNDYLNGNEGSDTYVFNSG 1828
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/511 (12%), Positives = 121/511 (23%), Gaps = 51/511 (9%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
S + D G G T+ N + G +
Sbjct: 959 TLSGGDGNDIIDGGADNDYLYGEAGDDSLLGGSGNDTLYGGNGNDTLEGGAGNDYLTGEG 1018
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM------------VSDIV 189
G ++ S + D SD V
Sbjct: 1019 GSDTYVFNSGWGQDTIGNYDASSGRSDVIAFGDGIAASDIVATRSGEDLILSLRNSSDKV 1078
Query: 190 AVQKIYGAPKG---------SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
VQ + + I+ + D+ D + G
Sbjct: 1079 TVQYYFSGDGTGAYRVDLIRFADGTTWDIKTVSAKTIGATNAADNLYGYATDDEINGLGG 1138
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N ++ G T++ +S+ G + ND + G + ++ SGND G
Sbjct: 1139 NDTIRGYGGNDTLRGDAGADTLSGGDGNDSIDGGADNDYLYGETGDDSLLGGSGNDTLYG 1198
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+G DT S + + + QD + + + I+ + +
Sbjct: 1199 GNGNDTL--EGGSGNDYLTGEGGSDTYVFNSGWGQDTIGNYDASTGRSDVIEFGSGIAAT 1256
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ T S EDLI I + + S+ + +
Sbjct: 1257 DVIATRSGEDLILSIRNGSDRVTVQY--YFSSDATSPYRIDQVRFADG----TSWDVAAI 1310
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
A T G + L + ++ L + G D S +
Sbjct: 1311 KALVQVPTSGTDNLYGYASDDVLNGLDGNDALRGYGGNDTLRGDAGADTLSGGDGNDSID 1370
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
D+ Y G L A ++ L
Sbjct: 1371 GGADNDYL---------------------YGEAGDDSLLGGSGNDTLYGGAGNDTLEGGS 1409
Query: 541 ADAPDLVQAGKDHFS-NFGYEEGRSITFNPD 570
+ + G D + N G+ + ++
Sbjct: 1410 GNDYLTGEGGSDTYVFNSGWGQDTIGNYDTT 1440
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 62/464 (13%), Positives = 103/464 (22%), Gaps = 68/464 (14%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ S + D G G + G
Sbjct: 770 DGGADNDYLYGEAGDDVLQGGSGNDTLYGGNGNDTLEGGAGNDYLTGEGGSDAYVFNSGW 829
Query: 135 MHPGSYNGGYPVYGVD-----------------------NDYENDSFLTSVMSYFMPQDS 171
N D N S +V YF +
Sbjct: 830 GQDTIGNYDASSGRSDVIEFGSGIAATDVIATRSGEDLILSLRNSSDKITVQYYFSSDAT 889
Query: 172 MMDASFGYCATPMV-SDIVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGD 228
D+ AV+ + P +N+Y + TI GG+
Sbjct: 890 GPYRVDQVRFADGTSWDVAAVKALVQVPASG-DDNLYGYASDDVLNGLAGNDTIRGYGGN 948
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L G + I G N + +S++G SGND + G + N+
Sbjct: 949 DTL----HGDAGADTLSGGDGNDIIDGGADNDYLYGEAGDDSLLGGSGNDTLYGGNGNDT 1004
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA------------------------ 324
+GND G G DT+ + + I ++ +
Sbjct: 1005 LEGGAGNDYLTGEGGSDTYVFNSGWGQDTIGNYDASSGRSDVIAFGDGIAASDIVATRSG 1064
Query: 325 -------------IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ V V+ +RFAD + + T + ++L
Sbjct: 1065 EDLILSLRNSSDKVTVQYYFSGDGTGAYRVDLIRFADGTTWDIKTVSAKTIGATNAADNL 1124
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
D + G D N Y G
Sbjct: 1125 YGYATDDEINGLGGNDTIRGYGGNDTLRGDAGADTLSGGDGNDSIDGGADNDYLYGETGD 1184
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
L ++ L + + G D +
Sbjct: 1185 DSLLGGSGNDTLYGGNGNDTLEGGSGNDYLTGEGGSDTYVFNSG 1228
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 64/439 (14%), Positives = 114/439 (25%), Gaps = 52/439 (11%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI----GHALGLMHPGS 139
+ T S AD + +G G +N E + L +
Sbjct: 595 YGDAGNDTLDGGSGNDYLSGGTGADTYLFGKGSAQDTIYNYDGEAVGTNADTILLGTDIT 654
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC----ATPMVSDIVAVQKIY 195
D+ + + ++ +S+ A V D+ V+ +
Sbjct: 655 STDVTLTRSGDDLIIRINGTDDTLRVQSYFNTDGASSYLVENLKFADGTVWDVSTVKALV 714
Query: 196 GAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
P +N+Y + TI GG+D L G N + SI
Sbjct: 715 QIPTSG-DDNLYGYASDDVLNGLAGNDTIRGYGGNDTL----RGDAGNDALSGGDGNDSI 769
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N + + + G SGND + G + N+ +GND G G D + + +
Sbjct: 770 DGGADNDYLYGEAGDDVLQGGSGNDTLYGGNGNDTLEGGAGNDYLTGEGGSDAYVFNSGW 829
Query: 314 YLYKIYRFENA--------------IIVYDANEHKQDFLSD------------------- 340
I ++ + A +D +
Sbjct: 830 GQDTIGNYDASSGRSDVIEFGSGIAATDVIATRSGEDLILSLRNSSDKITVQYYFSSDAT 889
Query: 341 ----VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
V+++RFAD V + + + ++L DV + G D
Sbjct: 890 GPYRVDQVRFADGTSWDVAAVKALVQVPASGDDNLYGYASDDVLNGLAGNDTIRGYGGND 949
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
N Y G L ++ L
Sbjct: 950 TLHGDAGADTLSGGDGNDIIDGGADNDYLYGEAGDDSLLGGSGNDTLYGGNGNDTLEGGA 1009
Query: 457 ADAPDLVQVGKDHFSNFGC 475
+ + G D +
Sbjct: 1010 GNDYLTGEGGSDTYVFNSG 1028
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 84/273 (30%), Gaps = 13/273 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
T S +D + + G G N G + +
Sbjct: 1589 GGSGNDTLYGGAGNDTLEGGSGNDYLTGEGGSDTYVFNSGWGQDTIGNYDSTSGRSDVIT 1648
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC------ATPMVSDIV 189
+ + S S + DA+ Y A D+
Sbjct: 1649 FGDGIAATDVIATRSGEDLILSLRNSTDRVTVQYYFSSDATGPYRIDQVRFADGTSWDVA 1708
Query: 190 AVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
AV+ + P +N+Y + T+ GG+D L G
Sbjct: 1709 AVKALVQVPASG-DDNLYGYASDDVLNGLAGNDTLRGYGGNDTL----RGDAGADTLFGG 1763
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ SI G N + +S++G SGND + G + N+ +GND +G+ G DT+
Sbjct: 1764 DGNDSIDGGADNDYLYGEAGDDSLLGGSGNDNLYGGNGNDTLKGGAGNDYLNGNEGSDTY 1823
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + IY ++ + D D +D
Sbjct: 1824 VFNSGWGQDTIYNYDTSSGRSDVIAFGDDIATD 1856
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 41/260 (15%), Positives = 69/260 (26%), Gaps = 39/260 (15%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + +V GND V G++ N+ SGND G +G DT+ + S
Sbjct: 569 GTNTVDYLYGRDGNDVLVAKGGNDYVYGDAGNDTLDGGSGNDYLSGGTGADTYLFGKGSA 628
Query: 315 LYKIYRFENA-------------------------------------IIVYDANEHKQDF 337
IY ++ + + D
Sbjct: 629 QDTIYNYDGEAVGTNADTILLGTDITSTDVTLTRSGDDLIIRINGTDDTLRVQSYFNTDG 688
Query: 338 LSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
S VE L+FAD + V+ + + T+ ++L DV + G
Sbjct: 689 ASSYLVENLKFADGTVWDVSTVKALVQIPTSGDDNLYGYASDDVLNGLAGNDTIRGYGGN 748
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
D N Y G + L ++ L
Sbjct: 749 DTLRGDAGNDALSGGDGNDSIDGGADNDYLYGEAGDDVLQGGSGNDTLYGGNGNDTLEGG 808
Query: 456 FADAPDLVQVGKDHFSNFGC 475
+ + G D +
Sbjct: 809 AGNDYLTGEGGSDAYVFNSG 828
>gi|325130473|gb|EGC53232.1| iron-regulated protein frpC [Neisseria meningitidis OX99.30304]
gi|325130487|gb|EGC53245.1| Iron-regulated protein frpC [Neisseria meningitidis OX99.30304]
Length = 1102
Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/260 (16%), Positives = 85/260 (32%), Gaps = 15/260 (5%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 738 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 797
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM------ 184
+ + + ++ + D S Y +
Sbjct: 798 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 857
Query: 185 VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
V D+ V+K+ + + G++ Y+ +Y + G+DLL+ G N
Sbjct: 858 VLDVATVKKL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLN----GDAGN 911
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ ++ G E N + + +++ G GND + G N+ +GND +G
Sbjct: 912 DSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGG 971
Query: 302 SGLDTFFYYAPSYLYKIYRF 321
SG DT+ + +Y +
Sbjct: 972 SGSDTYVFGEGFGQDTVYNY 991
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 76/288 (26%), Gaps = 60/288 (20%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 743 GHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 802
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV- 354
+ V ++ ++ + F + + V
Sbjct: 803 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 862
Query: 355 --------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L S L +G D G D +Y G
Sbjct: 863 TVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLNGDAGND-----SIYSG 917
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ +D N + Y +G + L ++ LI + G
Sbjct: 918 NGNDTLNGGEGNDAL----YGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 973
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
D + EG ++ D AA H+I G
Sbjct: 974 SDTYVFG---EGFGQDTVYNYHVDKNSDTM--HFKGFKAADVHFIRSG 1016
>gi|307149776|ref|YP_003890819.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
gi|306986576|gb|ADN18454.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
Length = 5944
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/304 (14%), Positives = 88/304 (28%), Gaps = 45/304 (14%)
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
GL G G+++ + +++SY + SF + + ++
Sbjct: 5528 GLPTQGIILLNGTQLGLNSTFTQADINNNLLSYAHNGSETTNDSFSFTVSDGAGGTISTT 5587
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQ-----------TIYDSGGDDLLDLTLIGGVKN 241
+ N+ + + + T D D L + + N
Sbjct: 5588 SFN--ITVNPVNDAPFVNQTIPNFTLTEEQPFNFTLAANTFSDIDLRDTLTYS-TNNLPN 5644
Query: 242 YIDLNTESWSSIGGYEKNMT-IAQHTVIES------------------VVGSSGNDVVIG 282
+++ N + + G N + I TVI + + G + ND + G
Sbjct: 5645 WLNFNAATQTFSGTPTLNDSGIYSLTVIATDSQGASVNNSFQITVLNLLKGGANNDTLSG 5704
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
S ++V G D G +G D + + + + + ++VE
Sbjct: 5705 TSNDDVLDGGLGGDRLIGKAGNDLYIVDSNR--DVVIENASEGQDKIQSSVSYTLPANVE 5762
Query: 343 RLRFADQCIDSV----------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
L + ++L+ A + LI G D
Sbjct: 5763 DLILTGTANINGTGNELDNTITGNSGNNLLKGLAGNDSLIGGNGNDTLVGGAGNDTLTGG 5822
Query: 393 EGRD 396
EG D
Sbjct: 5823 EGND 5826
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 47/159 (29%), Gaps = 18/159 (11%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW----S 251
GA +L + + G+DL + + + S
Sbjct: 5696 GANNDTLSGT--SNDDVLDGGLGGDRLIGKAGNDLYIVDS-NRDVVIENASEGQDKIQSS 5752
Query: 252 SIGGYEKNMT--IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
N+ I T + G+ ++ + GNS NN+ +GND G +G DT
Sbjct: 5753 VSYTLPANVEDLILTGTANINGTGNELDNTITGNSGNNLLKGLAGNDSLIGGNGNDTLV- 5811
Query: 310 YAPSYLYKIYRFENAIIVYDA-------NEHKQDFLSDV 341
+ + E + D ++D
Sbjct: 5812 -GGAGNDTLTGGEGNDQFLFGSGAVFAESAFGVDTITDF 5849
Score = 46.7 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 42/394 (10%), Positives = 90/394 (22%), Gaps = 46/394 (11%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
N NN + N G +T S+ + + I +
Sbjct: 5545 NSTFTQADINNNLLSYAHN-------GSET---TNDSFSFTVSDGAGGTISTTSFNI--- 5591
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
++ V F +Q I + + + +T + + +D + L+
Sbjct: 5592 TVNPVNDAPFVNQTIPNFTLTEEQPFNFTLAANTFSDIDLRDTLTYSTNNLPNWLNFNAA 5651
Query: 397 I----TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
+ G Y S + + + + L ++ + L
Sbjct: 5652 TQTFSGTPTLNDSGIYSLTVIATDSQGASVNNSFQITVLNLLKGGANNDTLSGTSNDDVL 5711
Query: 453 INAFADAPDLVQVGKDHFSNFGCE----EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ + G D + E D SY L
Sbjct: 5712 DGGLGGDRLIGKAGNDLYIVDSNRDVVIENASEGQDKIQSSVSYT-LPANVEDLILTGTA 5770
Query: 509 HYITHGVKEGRNPDAFKALE---YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
+ G + +A ++ LI + + AG D + G E
Sbjct: 5771 NINGTGNELDNTITGNSGNNLLKGLAGNDSLIGGNGNDTLVGGAGND--TLTGGEGNDQF 5828
Query: 566 TFNPDLYLTSYD---DLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKS-------- 614
F D F ++ +S +
Sbjct: 5829 LFGSGAVFAESAFGVDTITDFTKGSDKIVLSKLSF------VALLSPVNSNLLTEELAII 5882
Query: 615 --VMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ + ++ +L + G+
Sbjct: 5883 NVNVAEETAVSSTQSAKIIYNSSTGNLLYNQNGN 5916
Score = 39.0 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 55/463 (11%), Positives = 121/463 (26%), Gaps = 44/463 (9%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + +F+ S +G Y+ D + + + T+ + + E+GH
Sbjct: 5394 TSVAPGEFVVSWSGGDDNNGSGIAYYTVYVSDNGSAFTPWLTQTTLTEASYIGEVGHTYA 5453
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ N G N L +V + + + +T ++ + +
Sbjct: 5454 FKVVATDNAGNTQEIPPNPGATTQILETVTNIAPILAANNGLTLNEAST----GLITLTQ 5509
Query: 194 IYGAPKGSLGNN-IYKIEVQQKDSPFIQTIYDSGGDDLL--------------DLTLIGG 238
+ + Y I + G + + +
Sbjct: 5510 LQVTDTDNSPTELTYTITGLPTQGIILLNGTQLGLNSTFTQADINNNLLSYAHNGSETTN 5569
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN-VFFESSGNDV 297
++ + +I N+T+ V + N + N ++ +D+
Sbjct: 5570 DSFSFTVSDGAGGTISTTSFNITVNPVNDAPFVNQTIPNFTLTEEQPFNFTLAANTFSDI 5629
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
DT Y + + L F A + D + D SVN
Sbjct: 5630 ----DLRDTLTY-STNNLPNWLNFNAATQTFSGTPTLNDSGIYSLTVIATDSQGASVNNS 5684
Query: 358 QR----SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ ++L+ A+ + L DV + G D+
Sbjct: 5685 FQITVLNLLKGGANNDTLSGTSNDDVLDGGLGGDRLIGKAGNDLYIVDSN--RDVVIENA 5742
Query: 414 VFGSDRGAAARHYITHGVKE-----------GRNPDAFKALEYIASHEDLINAFADAPDL 462
G D+ ++ Y E G + + + + L + +
Sbjct: 5743 SEGQDKIQSSVSYTLPANVEDLILTGTANINGTGNELDNTITGNSGNNLLKGLAGNDSLI 5802
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN--VFGSDR 503
G D + + +L + FG D
Sbjct: 5803 GGNGNDTLVGGAGNDTLTGGEGNDQFLFGSGAVFAESAFGVDT 5845
>gi|83582760|ref|YP_425066.1| hemolysin-type calcium-binding region [Rhodospirillum rubrum ATCC
11170]
gi|83578076|gb|ABC24626.1| Hemolysin-type calcium-binding region [Rhodospirillum rubrum ATCC
11170]
Length = 462
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 69/175 (39%), Gaps = 17/175 (9%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
F Y+ + D+ A G +HF +G EGR FD+ YL D
Sbjct: 6 GSFFNEEFYLRVYSDVAEAVKQGAI--SSGYEHFLRYGMAEGRNPNRFFDTAYYLNQNPD 63
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ +V + A H++ +G E R+P A F Y+ ++ D+ H
Sbjct: 64 VASVVKTGSITAYSHFVDNGNVELRSPTAFFDVDWYLTNNNDVAVKVYRGELT---AYGH 120
Query: 554 FSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
F G +E R + F+P Y+ + D+ + +H+ G+ E R LG
Sbjct: 121 FFANGADELRQATPFFSPLDYMAANPDVTSS-------PLRHFAEFGIAENRDLG 168
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 68/186 (36%), Gaps = 15/186 (8%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYD 409
+V + V + +HF +G++EGR+ FD+ YL
Sbjct: 3 SNVGSFFNEEFYLRVYSDVAEAVKQGAISSGYEHFLRYGMAEGRNPNRFFDTAYYLNQNP 62
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKD 468
D+ +V + A H++ +G E R+P F Y+ ++ D+
Sbjct: 63 DVASVVKTGSITAYSHFVDNGNVELRSPTAFFDVDWYLTNNNDVAVKVYRGELT---AYG 119
Query: 469 HFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
HF G +E R T F Y+ + D+ + RH+ G+ E R+
Sbjct: 120 HFFANGADELRQATPFFSPLDYMAANPDV-------TSSPLRHFAEFGIAENRDLGNGLK 172
Query: 527 LEYIAS 532
+ Y A
Sbjct: 173 MTYFAQ 178
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 7/129 (5%)
Query: 483 FDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAF 540
F+ YL Y D+ + H++ +G+ EGRNP+ F Y+ + D+ +
Sbjct: 9 FNEEFYLRVYSDVAEAVKQGAISSGYEHFLRYGMAEGRNPNRFFDTAYYLNQNPDVASVV 68
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
HF + G E RS T F+ D YLT+ +D+ A H+ +G
Sbjct: 69 KTGSIT---AYSHFVDNGNVELRSPTAFFDVDWYLTNNNDVAVKVYRGELTAYGHFFANG 125
Query: 599 MKEGRALGI 607
E R
Sbjct: 126 ADELRQATP 134
Score = 45.2 bits (105), Expect = 0.037, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 50/161 (31%), Gaps = 15/161 (9%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S + + G++ + +G D G +G DTF + S
Sbjct: 313 TLTGTSRVETLTGSAQADTLSGGAGMDTLTGGAGADTFILASSSANDADTI--------- 363
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
DF+S ++++ +D + ++ + + + +
Sbjct: 364 -----TDFVSGTDKIQLSDAVYSLTGSRGAALAATDYHEVATVTALTGGTLALATNAEKI 418
Query: 390 G-LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+++ +I F+ L V + A
Sbjct: 419 IVVADSGEIYFNDDGATAGGLTLIGVLKNAGAAVDPAIGDF 459
>gi|251825700|gb|ACT20900.1| protease [Pseudomonas aeruginosa]
Length = 126
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 41/122 (33%), Gaps = 10/122 (8%)
Query: 54 VARWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINF-- 104
+ +L WS V + F + + N + P + +
Sbjct: 5 QTKLSLQSWSDVAKINFVDAGQGEQGDLVFGNFSSSVGGAAFAFLPDVQDALKGQSWYLI 64
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVM 163
+ + G HEIGH LGL HPG YN G D Y D+ SVM
Sbjct: 65 NSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAEDTRAYSVM 124
Query: 164 SY 165
SY
Sbjct: 125 SY 126
>gi|84516511|ref|ZP_01003870.1| hypothetical protein SKA53_07866 [Loktanella vestfoldensis SKA53]
gi|84509547|gb|EAQ06005.1| hypothetical protein SKA53_07866 [Loktanella vestfoldensis SKA53]
Length = 1211
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/460 (15%), Positives = 128/460 (27%), Gaps = 43/460 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
Q + G+ +D T ++I L + +I N I +
Sbjct: 381 NGQTSAVSAQTFTLGTAGNVTIDTTGASNRVDFI-LGGDGNDNILAGSGNDHIIGGAGND 439
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G +G D + +++ + + DG +G DT +A + +I V
Sbjct: 440 TLDGGAGVDRIHAGDGDDIILGDNDDVSLDGGNGTDTLRLFASFTSNRDISQMTSIEVIT 499
Query: 330 ANEHKQDF-LSDVERLR----FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ V FA + + ++L G ++ +
Sbjct: 500 LMADSLTLDMRGVFEAETLNGFATGASTIIGGNANETITGGMGNDNLDGGNGDNILDGAG 559
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G D R G+D V G A E
Sbjct: 560 GNDTLTGQLGHD-------------TFRITAGTDTVNRFMGSDVVVVSAGATAIVNVAQE 606
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ A++ N A A V + F F + + + + ++ G+
Sbjct: 607 FTATNASRNNGGAAANARFNVDTLNVD--------FANFSAMTVVDAVTEGIDIRGAAAV 658
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
I G + F + A + + A ++ AG D + G +
Sbjct: 659 GGLGTSIITGTNGNDTIEGFSTVNAGAGDDTVTGAAGNSTITGGAGAD--TLAGGGGNDT 716
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG---RALGISGMQFKSVM----N 617
F D +V G+ + A G R G F
Sbjct: 717 FVFGAT-------DSASVPGAGTTDATGSDRITDWNAGDLIRVTGQVASGFNVGTHVLVG 769
Query: 618 LSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSM 657
L + A+ ++ F V+ DGN D D + +
Sbjct: 770 LVDPFTPGANGAVIFAQNFVNTTYLVAMDGNLADGDGFDI 809
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/343 (13%), Positives = 89/343 (25%), Gaps = 19/343 (5%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
S V TF + + + + V + D G G T+
Sbjct: 385 SAVSAQTFTLGTAGNVTIDTTGASNRVDFILGGDGNDNILAGSGNDHIIGGAGNDTLDGG 444
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
+ I H G + D + + ++ + + +
Sbjct: 445 AGVDRI-------HAGDGDDIILGDNDDVSLDGGNGTDTLRLFASFTSNRDISQMTSIEV 497
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+ + G + N +TI G+D LD GG +
Sbjct: 498 ITLMADSLTLDMRGVFEAETLNGFATGASTIIGGNANETITGGMGNDNLD----GGNGDN 553
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN----NVFFESSGNDVF 298
I ++ G + T ++V G+DVV+ ++ NV E + +
Sbjct: 554 ILDGAGGNDTLTGQLGHDTFRITAGTDTVNRFMGSDVVVVSAGATAIVNVAQEFTATNAS 613
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF----LSDVERLRFADQCIDSV 354
+ G + L + +A+ V DA D +
Sbjct: 614 RNNGGAAANARFNVDTLNVDFANFSAMTVVDAVTEGIDIRGAAAVGGLGTSIITGTNGND 673
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
++ S + A + + G G D
Sbjct: 674 TIEGFSTVNAGAGDDTVTGAAGNSTITGGAGADTLAGGGGNDT 716
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 54/438 (12%), Positives = 102/438 (23%), Gaps = 53/438 (12%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
I N T + ++ G T+ G
Sbjct: 523 TGASTIIGGNA--NETITGGMGNDNLDGGNGDNILDGAGGNDTLTGQLGHDTFRITAGT- 579
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ V + + +V F ++ + D + V
Sbjct: 580 ---DTVNRFMGSDVVVVSAGATAIVNVAQEFTATNASRNNGGAAANARFNVDTLNVDFAN 636
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ + I+++ + + S I G
Sbjct: 637 FSAMTVVDAVTEGIDIRGAAA----------------------------VGGLGTSIITG 668
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N TI +V +G+D V G + N+ +G D G G DTF + A
Sbjct: 669 TNGNDTIEG---FSTVNAGAGDDTVTGAAGNSTITGGAGADTLAGGGGNDTFVFGATDSA 725
Query: 316 ----YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + D N ++ F V V A+ +
Sbjct: 726 SVPGAGTTDATGSDRITDWNAGDLIRVTGQVASGFNVGT--HVLVGLVDPFTPGANGAVI 783
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+ + +G DI D+ N + A
Sbjct: 784 FAQNFVNTTYLVAMDGNLADGDGFDI----------AVDVTNADTTAAFTNAAAARAATQ 833
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+ D + A+ + L+ G D + + + +GS
Sbjct: 834 FDVTLADGGATVVLGANADTLVGGNGADNITGGGGADTLTGGAGADTITGGAGADTLIGS 893
Query: 492 YDDLRNVFGSDRGAAARH 509
D + G+ H
Sbjct: 894 AGDDIFLIGAAGKGEGSH 911
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 44/342 (12%), Positives = 81/342 (23%), Gaps = 40/342 (11%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+T + + + T + AD G G T +
Sbjct: 666 ITGTNGNDTIEGFSTVNAGAGDDTVTGAAGNSTITGGAGADTLAGGGGNDTFVF------ 719
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
G PG+ D+ + + G
Sbjct: 720 -GATDSASVPGAGTTDATGSDRITDWNAGDLIRVTGQVASGFNVGTHVLVGLVDPFTPGA 778
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
AV + N Y + + + +D D T
Sbjct: 779 NGAVIF-----AQNFVNTTYLVAMDGNLADG--DGFDIAVDVTNADTTAAFTNAAAARAA 831
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + + T+ +++VG +G D + G + +G D G +G DT
Sbjct: 832 TQFD-VTLADGGATVVLGANADTLVGGNGADNITGGGGADTLTGGAGADTITGGAGADTL 890
Query: 308 FYYAPSYLY-----------------KIYRFENAIIVYDANEHKQDFL-----SDVERLR 345
A ++ I E V + D L VE +
Sbjct: 891 IGSAGDDIFLIGAAGKGEGSHHELGEIIDGGEGNDTVRFVSTKPNDTLQLTADVKVETVA 950
Query: 346 FADQ---CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+D + + N + + LI G +
Sbjct: 951 ISDAHGSTVGTSNSNIDASNMINTEHVILIGNNGANQLTGNA 992
>gi|260574700|ref|ZP_05842703.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
gi|259023117|gb|EEW26410.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
Length = 954
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/380 (15%), Positives = 105/380 (27%), Gaps = 23/380 (6%)
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
PV D D + DS +++ TP YG G+ G
Sbjct: 327 PVLANDTDVDGDSVALFGTPTSPNGTVVVNGDGTLTFTPNPGFTGEATIEYGITDGNGGT 386
Query: 205 NIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGG-VKNYIDLNTESWSSIGGYEKNMTI 262
+ V P D G DL+D G ++ID G + +
Sbjct: 387 ATGIVTVTVGAGPVRDGYVDGTAGGDLIDTAYAGDPDGDFID--AGDAILPGDAPNDDRV 444
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++V+ G+D+V+G + N++ G+D+ +G SG DT ++ +
Sbjct: 445 RAGGGNDTVLAGLGDDMVVGGAGNDLIDGGVGDDILNGESGNDTVI--GGDGNDQVAGLD 502
Query: 323 NAIIVYDAN---------------EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
++ + D D + + +E
Sbjct: 503 GDDVIDTSGGGSNPLPDRGYPGLFPADADPFDDRDTVYGGTGNDRITTGDDNDWIEAGYG 562
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF--GSDRGAAARH 425
+ + D + + EG D+ Y L VF G + A
Sbjct: 563 NDTVDGGFDDDTIQGRQGNDSIIGGEGSDLIDGGQDDDIIYGGLSPVFPDGLNIPDAYDA 622
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+G R D + + + + + +D G +
Sbjct: 623 RPDNGRDTIRGGDGNDTIFGQDDDDLIFGDRGNDLIDGGIDEDTILGGGGNDTIIGGAGV 682
Query: 486 YLYLGSYDDLRNVFGSDRGA 505
G D + G+
Sbjct: 683 DSMSGGNDRDVFLGGNAGDF 702
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 41/256 (16%), Positives = 70/256 (27%), Gaps = 17/256 (6%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ D G G + + I + G +P G
Sbjct: 464 GGAGNDLIDGGVGDDILNGESGNDTVIGGDGNDQVAGLDGDDVIDTSGGGSNPLPDRGYP 523
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMD-----ASFGYCATPMVSDIVAVQKIYGAPK 199
++ D D +D + + D A +G D +Q G
Sbjct: 524 GLFPADADPFDDRDTVYGGTGNDRITTGDDNDWIEAGYGNDTVDGGFDDDTIQGRQGNDS 583
Query: 200 GSLG---NNIYKIEVQQKDSPFIQTIYDSGGD--DLLDL-------TLIGGVKNYIDLNT 247
G + I + + ++ G + D D T+ GG N
Sbjct: 584 IIGGEGSDLIDGGQDDDIIYGGLSPVFPDGLNIPDAYDARPDNGRDTIRGGDGNDTIFGQ 643
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ I G N I ++++G GND +IG + + + DVF G + D
Sbjct: 644 DDDDLIFGDRGNDLIDGGIDEDTILGGGGNDTIIGGAGVDSMSGGNDRDVFLGGNAGDFV 703
Query: 308 FYYAPSYLYKIYRFEN 323
Y
Sbjct: 704 DGNEGGDDYDTLDLHG 719
Score = 41.7 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 65/566 (11%), Positives = 131/566 (23%), Gaps = 83/566 (14%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ N D + G +L + YNG + D + +
Sbjct: 233 DIPVLANDTDPDGQTLTVTGGNAAHGTVTVNADGSLHYVPDADYNGPDTITYTVTDPDGN 292
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
+ T+V P + A+ +T + + + + G+++ +
Sbjct: 293 TASTTVAVTVRPVNDDPVANPDSAST--TAGVAVIIPVLANDTDVDGDSVALFGTPTSPN 350
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ D ++ G+ TI + ++G
Sbjct: 351 GTVVVNGDGTLT---------------------FTPNPGFTGEATIEYGITDGNGGTATG 389
Query: 277 NDVVIGNSA---NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
V + + ++G D+ D + D + + + A
Sbjct: 390 IVTVTVGAGPVRDGYVDGTAGGDLIDTAYAGDPDGDFIDAGDAILPGDAPNDDRVRAGGG 449
Query: 334 KQDFLSDV--ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
L+ + + + IL + + +I G D +
Sbjct: 450 NDTVLAGLGDDMVVGGAGNDLIDGGVGDDILNGESGNDTVIGGDGNDQVAGLDGDDVIDT 509
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
S G Y G + + F Y G D +E ++
Sbjct: 510 SGGGSNPLPDRGYPGLFPADADPFDDRDTV----YGGTGNDRITTGDDNDWIEAGYGNDT 565
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
+ F D + G D + D + Y L VF +
Sbjct: 566 VDGGFDDDTIQGRQGNDSIIGGEGSDLIDGGQDDDII---YGGLSPVFPDGLNIPDAY-- 620
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
+ R + + ++ + D G D
Sbjct: 621 -----DARPDNGRDTIRGGDGNDTIFGQDDDDLIFGDRGNDL------------------ 657
Query: 572 YLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLS 631
I G+ E LG G + D +
Sbjct: 658 -----------------------IDGGIDEDTILGGGGNDTIIGGAGVDSMSGGNDRDVF 694
Query: 632 FDHKKVDLYTDYFGDGNYYDSDLYSM 657
D G +Y DL+ +
Sbjct: 695 LGGNAGDFVDGNEGGDDYDTLDLHGV 720
>gi|319638376|ref|ZP_07993138.1| outer membrane secretion protein [Neisseria mucosa C102]
gi|317400125|gb|EFV80784.1| outer membrane secretion protein [Neisseria mucosa C102]
Length = 429
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/238 (18%), Positives = 68/238 (28%), Gaps = 21/238 (8%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG + GN I + + + I + D + G I I
Sbjct: 125 YGHEDKNPGNVIRAEDCKDGN-----VIRGTDAKDTI----YGTACEDIIYGGNGTDVIY 175
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N TI +S+ G G D + G + N+ SG D+ G G D +F +
Sbjct: 176 AGAGNDTIYGDADGDSLYGEEGKDYLQGGAGNDYLNGGSGADIMRGGDGNDVYFVDNAND 235
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----------CIDSVNVKQRSILEY 364
Y +A I VE L + + L
Sbjct: 236 QVIEYGNAHAGIDTVRTVIDYTLTDHVENLILQGMQNLNGTGNSLNNNIEGNGGDNHLYG 295
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
A + L+ G D + G D F Y +D +R G+D
Sbjct: 296 LAGDDCLVGKDGNDYLDGGVGNDILIGGTGNDTYFFDKGYG--HDTIREESGNDTLLF 351
Score = 58.3 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 61/201 (30%), Gaps = 4/201 (1%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID---LNTESWSS 252
GA G+ V + I+ G D + + + ++++ L +
Sbjct: 215 GADIMRGGDGNDVYFVDNANDQVIEYGNAHAGIDTVRTVIDYTLTDHVENLILQGMQNLN 274
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G N I + + G +G+D ++G N+ GND+ G +G DT+F+
Sbjct: 275 GTGNSLNNNIEGNGGDNHLYGLAGDDCLVGKDGNDYLDGGVGNDILIGGTGNDTYFFDKG 334
Query: 313 SYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
I + D L + ++ +
Sbjct: 335 YGHDTIREESGNDTLLFGKGVAASDVLLSKSGANLTVSVGTNDSITIDDWFTGNDHKVEN 394
Query: 372 IQVIGQDVFESMKHFYEFGLS 392
+ ++ H + LS
Sbjct: 395 FKFADGSTYQVTGHGDYYSLS 415
>gi|296283200|ref|ZP_06861198.1| VCBS [Citromicrobium bathyomarinum JL354]
Length = 1533
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/373 (15%), Positives = 99/373 (26%), Gaps = 15/373 (4%)
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ Y +F Y + + G T VS A A G
Sbjct: 822 TYDAYLTHTFEAGGTYYIEVTNERGEMPAGSSYTMNVSLTGATIPSLSAAATVYGGTGDD 881
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G D +L N +L ++ + A + +
Sbjct: 882 VYEVAGAGDLLVEYAGGGTDTVLSRVSYTLGANIENL------TLVSGSGAVEAAGNDLD 935
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G++ ++V+ G + +++ S GND DG +G DT + Y I+ N +
Sbjct: 936 NLLRGNAADNVIRGGAGDDILVGSGGNDAIDGGAGTDTAVFSGNRSDYTIFNIANGQVQQ 995
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA-SYEDLIQVIGQDVFESMKHFY 387
+ D L VERL F D Y D +
Sbjct: 996 ISGPDGVDTLFSVERLAFDDGIYALGAQAGELQFRYDQFGAGDAAGGWSSNERYPRTVAD 1055
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G I F S + + A + I +
Sbjct: 1056 VNGDGRADLIGFASSGTF-----VALGQANGTFAPLQLGIAGFGSADAAGGWADGDRFPR 1110
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ D+ G + ++G G F L L + G
Sbjct: 1111 TMGDVNGDGRADIIGFGSG-GTYVSYGQASGTFA--APVLALAGFGSADAAGGWLDNTRF 1167
Query: 508 RHYITHGVKEGRN 520
+ +GR+
Sbjct: 1168 PREVADVNGDGRD 1180
Score = 45.5 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 41/346 (11%), Positives = 95/346 (27%), Gaps = 36/346 (10%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G E T + ++ G G D+++G++ + +G+DV + G D F
Sbjct: 643 VLAGDEGADTFYAGGGVANLTGRDGADMLVGSAYADRLDGGAGDDVIRTNGGADIVF--G 700
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY-TASYED 370
S + + A + D + V ++ + ++ + ++ A
Sbjct: 701 GSGNDRFIIDSGS-----APVDRPDIVKLVTQVNGTRETAITLEGGFDLVSDWRIADSAT 755
Query: 371 LIQVIGQDVFESMKHFYEFGLSEG--------RDITFDSY--LYLGSYDDLRNVFGSDRG 420
+ V S + FY +++G R FDS + + + +
Sbjct: 756 IPHATVNAVSSSGREFYAVTVAQGATIVIDIDRTTDFDSALRIVDSAGQTISANATASVI 815
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ + + + A + V + + +
Sbjct: 816 DPGSDFTYDAYLTHTFEAGGTYYIEVTNERGEMPAGSSYTMNVSLTGATIPSLSAAATVY 875
Query: 481 VTFDSYLY-LGSYDDLR---NVFGSDRGAAARHYITHGVKEGRNP---------DAFKAL 527
+Y + DL G+D + Y E
Sbjct: 876 GGTGDDVYEVAGAGDLLVEYAGGGTDTVLSRVSYTLGANIENLTLVSGSGAVEAAGNDLD 935
Query: 528 EYIASH---EDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
+ + + D + G D + G + F+ +
Sbjct: 936 NLLRGNAADNVIRGGAGDDILVGSGGND--AIDGGAGTDTAVFSGN 979
>gi|126734587|ref|ZP_01750333.1| hypothetical protein RCCS2_11959 [Roseobacter sp. CCS2]
gi|126715142|gb|EBA12007.1| hypothetical protein RCCS2_11959 [Roseobacter sp. CCS2]
Length = 421
Score = 82.9 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 62/334 (18%), Positives = 103/334 (30%), Gaps = 60/334 (17%)
Query: 37 THRLSFDITELN--------PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGY 88
T S +I+ LN + A W+ + ++TF+ S +DI+ S +
Sbjct: 46 TVTYSSNISGLNGGLTGAALAAFESAIELAFATWAALANITFQAVSGAADIEIRSDSVDG 105
Query: 89 VCTPRYDSRYF--------------------MEINFDKADVWRYGIGKGTILSHNALHEI 128
P + F +EI FD+A+ W G GT ALHEI
Sbjct: 106 NGGPDGNVLGFMRPTDFETIFVGDEFAIFDDVEIVFDRAENWAVDGGSGTSFFAVALHEI 165
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM---PQDSMMDASFGYCATPMV 185
GHALG+ H + + G + ++ D + ++ D +
Sbjct: 166 GHALGMDHVPNVSDGGTLQNMNPILSTDELQSGDIAGIGTLYGDREYSDGVDNVSFAKVN 225
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
D V G G + F +IY G+D L
Sbjct: 226 VDTGQVIFSKGGNDNVTGTD------------FGDSIYGGAGNDHL-------------F 260
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + I ++++G +G GN+ N+ GND +G SG D
Sbjct: 261 GGGGNDRLVDTRGDNDIEGGNGGDTIIGGAGAIDADGNNGNDTLIGGIGNDTLNGGSGND 320
Query: 306 TFFYYAP----SYLYKIYRFENAIIVYDANEHKQ 335
T + + +
Sbjct: 321 TLRGDPSGSFIAGNDTLIAGSGNDELEGGGGADT 354
>gi|330972788|gb|EGH72854.1| glycosyl transferase group 1 [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 468
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 70/197 (35%), Gaps = 44/197 (22%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--------------FVT 482
P F A+EY+ + D+ ++ H+ ++G EGR
Sbjct: 5 PFDFSAVEYLRLNPDVASSGMHPA-------QHYLDYGRAEGRKYQDISVDKQQLLRLGI 57
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD Y+ Y D+ N A H++T G EGR F++ Y+ H + +
Sbjct: 58 FDPDFYMSHYPDVANAGLD----PAEHFLTSGCAEGRWASVFFRSDWYMDCHPESKSHPK 113
Query: 542 DAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+ H+S G G + F P+ YL Y D H+I HG
Sbjct: 114 N-------CLFHYSEIGSRIGYEPNPFFEPEYYLAKYKD-----QIGFDEPLAHFIKHG- 160
Query: 600 KEGRALGISGMQFKSVM 616
+EG +F +
Sbjct: 161 EEGFN---PSPRFDAAA 174
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 72/217 (33%), Gaps = 48/217 (22%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--------------ITFDSYLY 404
S +EY D+ +H+ ++G +EGR FD Y
Sbjct: 8 FSAVEYLRLNPDVASS----GMHPAQHYLDYGRAEGRKYQDISVDKQQLLRLGIFDPDFY 63
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
+ Y D+ N A H++T G EGR F ++ ++ ++ +
Sbjct: 64 MSHYPDVANA----GLDPAEHFLTSGCAEGRWASVFFRSDW------YMDCHPESKSHPK 113
Query: 465 VGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
H+S G G F+ YL Y D G D H+I HG EG NP
Sbjct: 114 NCLFHYSEIGSRIGYEPNPFFEPEYYLAKYKD---QIGFDE--PLAHFIKHGE-EGFNPS 167
Query: 523 A-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
F A YI + + H+ G
Sbjct: 168 PRFDAAAYIKA-----------TGCSENPLKHYLRTG 193
>gi|332289985|ref|YP_004420837.1| Hemolysin-type calcium-binding repeat protein [Gallibacterium anatis
UMN179]
gi|330432881|gb|AEC17940.1| Hemolysin-type calcium-binding repeat protein [Gallibacterium anatis
UMN179]
Length = 2274
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/425 (13%), Positives = 121/425 (28%), Gaps = 32/425 (7%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+++ + + N + + D D+ G G T+ +
Sbjct: 1743 HQSNGQTGGNDLLYGNEGNDHILGGGGHDILNGGDGDDILEGGAGNDTLHGGAGSDSLSG 1802
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA---TPMVSD 187
G + Y + LT V + +P V
Sbjct: 1803 GDGNDVIYLEGDDAARGHQNKYYATNQTLTGVEINKALAIGGSGSDRFVVVKDNSPGVGK 1862
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ + + + ++ + ++ + + + D G + L YI L
Sbjct: 1863 GLLKNLIVDFDVNDPNEKIDLSQYDIGLLNIEMQEFVIDGGYITRVWLGKPSESTQYISL 1922
Query: 246 NTESWSSIGGYEKNMTIAQHTVI------ESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
I +++ I TV E+ G SGND + GN+ N F +G D
Sbjct: 1923 ---YNVRISQLKQSHFIEPATVNSLPRLQETFNGGSGNDTLQGNAVGNYFDGKAGADTMI 1979
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQ 358
G G D + K+ + + ++VE L+ I+ +
Sbjct: 1980 GLEGDDVYVVDNS--GDKVIEANESGYDIVKSTISYQLANNVEELQLLGGSAINGTGNRL 2037
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEF-----------GLSEGRDITFDSYLY-LG 406
+ + + L +G DV + + ++G D+ S + L
Sbjct: 2038 NNRIVGNSGNNVLDGGLGDDVLIGGEGNDTYLVDSTLDTVIEKFNQGVDLVRSSVSFTLS 2097
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ + G + + + + + L A ++ L + G
Sbjct: 2098 DNIENLELVGEQHISGNGNSVNN---KLLGNQGHNRLMGYAGNDTLQGRKGNDILFGGQG 2154
Query: 467 KDHFS 471
D F
Sbjct: 2155 NDTFV 2159
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 70/221 (31%), Gaps = 26/221 (11%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G GN+ + T+ GDD+ + G I+ N + +
Sbjct: 1952 NGGSGNDTLQGNAVGNYFDGKAGADTMIGLEGDDVYVVDNSG--DKVIEANESGYDIVKS 2009
Query: 256 YEK--------NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + + I + G+ N+ ++GNS NNV G+DV G G DT+
Sbjct: 2010 TISYQLANNVEELQLLGGSAI-NGTGNRLNNRIVGNSGNNVLDGGLGDDVLIGGEGNDTY 2068
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK---------- 357
+ L + N + + ++E L + S N
Sbjct: 2069 LVDST--LDTVIEKFNQGVDLVRSSVSFTLSDNIENLELVGEQHISGNGNSVNNKLLGNQ 2126
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ L A + L G D+ + F + G I
Sbjct: 2127 GHNRLMGYAGNDTLQGRKGNDILFGGQGNDTFVFARGDGID 2167
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 61/160 (38%), Gaps = 7/160 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
GA + + N + + G+D+L + L G +
Sbjct: 722 GAAEIEVANGGRGDDFFYSSGNSSVFVRGGDGNDMLLGSIANDALAGENGDDFISGNAGD 781
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G+ N + + + G S +D + G + ++ SG+D DG SG DT +
Sbjct: 782 DVLRGHRGNDVLFGDRGNDLIYGGSDDDKLYGGAGDDALVGDSGDDFIDGGSGDDTAEFS 841
Query: 311 APSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFAD 348
Y+I + E I++ D DFL +VE+ F D
Sbjct: 842 GKFEEYEITKLEGGILIKDKVQGRDGSDFLINVEKAAFTD 881
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 59/357 (16%), Positives = 112/357 (31%), Gaps = 39/357 (10%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ + + + S T+ D+ G + +DL+ I
Sbjct: 1487 ANNANDTYVYTDEYKYLSKNRYTLQDTDGGFDVVNVAAMNGNMLVDLHAG----IADLNG 1542
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+ + + + IE V+ GND ++GN+ +N+ G+D +G++G DT + +
Sbjct: 1543 NILLIKDSQIEGVISGDGNDHLVGNALDNLLIGGRGDDQLEGAAGNDTLY--GAQGNDTL 1600
Query: 319 YRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSI--LEYTASYEDLIQVI 375
+ N + D ++D F + + S+ L+ +D I +
Sbjct: 1601 TGGDGFDTFVVNKNANTTDTITD-----FKVGVDRLILAEFPSLKRLDLRQDGQDTILSL 1655
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G + + F + ++ ++ + L + + + A H E
Sbjct: 1656 GNNQ------YVRFINLQASSLSLNNVVILAEKYNTLYMEKYNGYGFASH-----TSETA 1704
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
PD A A + +G D G+ D LY +D
Sbjct: 1705 LPDVGVAYWGTAGDNRIFGGEGADTLYGGMGNDLLVGEHQSNGQTGGND-LLYGNEGNDH 1763
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G H I +G D LE A ++ L G D
Sbjct: 1764 ILGGGG-------HDILNG------GDGDDILEGGAGNDTLHGGAGSDSLSGGDGND 1807
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/363 (12%), Positives = 78/363 (21%), Gaps = 67/363 (18%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
G+ Y E + + + G N G+ L +H G + +
Sbjct: 1485 GFANNANDTYVYTDEYKYLSKNRYTLQDTDGGFDVVNVAAMNGNMLVDLHAGIADLNGNI 1544
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA--PKGSLGN 204
+ + + + G + +YGA G
Sbjct: 1545 LLIKDSQIEGVISGDGNDHLVGNALDNLLIGGR-GDDQLEGAAGNDTLYGAQGNDTLTGG 1603
Query: 205 NIYKIEVQQKDSPFIQTIYD----------------------SGGDDLLDLTLIGGVKNY 242
+ + V K++ TI D G D + +
Sbjct: 1604 DGFDTFVVNKNANTTDTITDFKVGVDRLILAEFPSLKRLDLRQDGQDTILSLGNNQYVRF 1663
Query: 243 IDLNTESWSSIGGYEKNMTI----AQHTVIESVVGSSGNDVV------------IGNSAN 286
I+L S S N+ I +E G G + +
Sbjct: 1664 INLQASSLS-----LNNVVILAEKYNTLYMEKYNGYGFASHTSETALPDVGVAYWGTAGD 1718
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
N F G D G G D + D L E
Sbjct: 1719 NRIFGGEGADTLYGGMGNDLLV---------------GEHQSNGQTGGNDLLYGNE---- 1759
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ IL + L G D +G D+ +
Sbjct: 1760 --GNDHILGGGGHDILNGGDGDDILEGGAGNDTLHGGAGSDSLSGGDGNDVIYLEGDDAA 1817
Query: 407 SYD 409
Sbjct: 1818 RGH 1820
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 52/178 (29%), Gaps = 26/178 (14%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++ + GND ++G++ NN G+D F +G D I+ + I
Sbjct: 649 GVQHIEAGGGNDNLVGDAQNNWLVGGGGSDTFFAGAGDDVLIIDGDDKAENIHGGDGNDI 708
Query: 327 VYDANEHKQDF---LSDVE-------------------RLRFADQCIDSVNVKQRSILEY 364
V +++E +R D + L
Sbjct: 709 VQVVGNKGVSLDLGAAEIEVANGGRGDDFFYSSGNSSVFVRGGDGNDMLLGSIANDALAG 768
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSD 418
+ + G DV + G D+ + D LY G+ DD D
Sbjct: 769 ENGDDFISGNAGDDVLRGHRGNDVLFGDRGNDLIYGGSDDDKLYGGAGDDALVGDSGD 826
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/387 (12%), Positives = 102/387 (26%), Gaps = 37/387 (9%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG + + + V + I+ G D L + DL S G
Sbjct: 1694 YGFASHTSETALPDVGVAYWGTAGDNRIFGGEGADTLYGGMGN------DLLVGEHQSNG 1747
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N + + + ++G G+D++ G +++ +GND G +G D+ +
Sbjct: 1748 QTGGNDLLYGNEGNDHILGGGGHDILNGGDGDDILEGGAGNDTLHGGAGSDSLSGGDGND 1807
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERL-----------RFADQCIDSVNVKQRSILE 363
+ + + A + L+ VE RF +S V + +
Sbjct: 1808 VIYLEGDDAARGHQNKYYATNQTLTGVEINKALAIGGSGSDRFVVVKDNSPGVGKGLLKN 1867
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
++ D+ + + E D + L S + +
Sbjct: 1868 LIVDFDVNDPNEKIDLSQYDIGLLNIEMQE---FVIDGGYITRVW--LGKPSESTQYISL 1922
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ +K+ + E + ++F +
Sbjct: 1923 YNVRISQLKQSHFIEPATVNSLPRLQETFNGGSGNDTLQGNAVGNYFDGKAGADTMIGLE 1982
Query: 484 DSYLYLGSYDDL----RNVFGSDRGAAARHYITHGVKEGRNPDAFKALE----------- 528
+Y+ N G D + Y E A+
Sbjct: 1983 GDDVYVVDNSGDKVIEANESGYDIVKSTISYQLANNVEELQLLGGSAINGTGNRLNNRIV 2042
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFS 555
+ + L D + G D +
Sbjct: 2043 GNSGNNVLDGGLGDDVLIGGEGNDTYL 2069
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 30/245 (12%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM- 260
G+++ I+ + I+ G+D++ + +DL G +
Sbjct: 684 AGDDVLIID----GDDKAENIHGGDGNDIVQVVG--NKGVSLDLGAAEIEVANGGRGDDF 737
Query: 261 -TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ ++ + V G GND+++G+ AN+ +G+D G++G D ++
Sbjct: 738 FYSSGNSSVF-VRGGDGNDMLLGSIANDALAGENGDDFISGNAGDD--VLRGHRGNDVLF 794
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
++Y ++ L + + + G D
Sbjct: 795 GDRGNDLIYGGSDD-----------------DKLYGGAGDDALVGDSGDDFIDGGSGDDT 837
Query: 380 FESMKHFYEFGLS--EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
E F E+ ++ EG + D D L NV + + +
Sbjct: 838 AEFSGKFEEYEITKLEGGILIKDKVQGRDGSDFLINVEKAAFTDIKDYILPSAEHNLGGI 897
Query: 438 DAFKA 442
D
Sbjct: 898 DNAVP 902
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 57/166 (34%), Gaps = 20/166 (12%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIY------KIEVQQKDSPFIQTIYDSGGDDLL------ 231
+ +++ +Q + G+ GN + + G+D
Sbjct: 2015 LANNVEELQLLGGSAINGTGNRLNNRIVGNSGNNVLDGGLGDDVLIGGEGNDTYLVDSTL 2074
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI--------AQHTVIESVVGSSGNDVVIGN 283
D + + + + ++ +N+ + ++V ++G+ G++ ++G
Sbjct: 2075 DTVIEKFNQGVDLVRSSVSFTLSDNIENLELVGEQHISGNGNSVNNKLLGNQGHNRLMGY 2134
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ N+ GND+ G G DTF + + I + +
Sbjct: 2135 AGNDTLQGRKGNDILFGGQGNDTFVFARGDGIDVIMEEQGNDTLRF 2180
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 61/434 (14%), Positives = 108/434 (24%), Gaps = 84/434 (19%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ +Y Q+ +GG+DLL + ++GG + I + + G
Sbjct: 1728 DTLYGGMGNDLLVGEHQSNGQTGGNDLLYGNEGNDHILGGGGHDILNGGDGDDILEGGAG 1787
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGN-------------SANNVFFESSGNDVF-DGSSGL 304
N T+ +S+ G GNDV+ + N N G SG
Sbjct: 1788 NDTLHGGAGSDSLSGGDGNDVIYLEGDDAARGHQNKYYATNQTLTGVEINKALAIGGSGS 1847
Query: 305 DTFFY---YAPSYLYKIYRFENAIIVYDANEHKQDF------LSDVERLRF--------- 346
D F +P + + + K D L ++E F
Sbjct: 1848 DRFVVVKDNSPGVGKGLLKNLIVDFDVNDPNEKIDLSQYDIGLLNIEMQEFVIDGGYITR 1907
Query: 347 --------ADQCIDSVN--------------------VKQRSILEYTASYEDLIQVIGQD 378
+ Q I N + + + + L +
Sbjct: 1908 VWLGKPSESTQYISLYNVRISQLKQSHFIEPATVNSLPRLQETFNGGSGNDTLQGNAVGN 1967
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE----- 433
F+ EG D+ G N G D + Y E
Sbjct: 1968 YFDGKAGADTMIGLEGDDVYVVDNS--GDKVIEANESGYDIVKSTISYQLANNVEELQLL 2025
Query: 434 ------GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
G + + + L D + G D + + F+ +
Sbjct: 2026 GGSAINGTGNRLNNRIVGNSGNNVLDGGLGDDVLIGGEGNDTYLVDSTLDTVIEKFNQGV 2085
Query: 488 YLGSYDD---LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE---YIASHEDLINAFA 541
L L + + +H +G + A ++ L
Sbjct: 2086 DLVRSSVSFTLSDNIENLELVGEQHISGNGNSVNNKLLGNQGHNRLMGYAGNDTLQGRKG 2145
Query: 542 DAPDLVQAGKDHFS 555
+ G D F
Sbjct: 2146 NDILFGGQGNDTFV 2159
>gi|166363981|ref|YP_001656254.1| putative peptidase [Microcystis aeruginosa NIES-843]
gi|166086354|dbj|BAG01062.1| putative peptidase [Microcystis aeruginosa NIES-843]
Length = 2534
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 77/265 (29%), Gaps = 30/265 (11%)
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG---NNIYKIEVQ 212
D+ +++ + G+ G G N+ Y +
Sbjct: 2160 DTATATILDNDGNAANNNLVGTGFADALAGVGGNDTLSGLGGNDTLDGGANNDTYLFDTD 2219
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ D+ G D L+ ++L + ++ +T+A T E+V+
Sbjct: 2220 LVLGS--DRVIDASGIDTLNFAATTTKTINLNLGSTVAQTVTAGNLTLTLASATAFENVI 2277
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G S ND ++GN+ N +GND +G + DT+ + L + + I
Sbjct: 2278 GGSLNDNIVGNTLANSLSGGAGNDTLNGGANNDTYLFDTDLVLGSDRVIDASGIDTLNFA 2337
Query: 333 HKQD-------------------------FLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ E + + V + L A
Sbjct: 2338 ATTTKTINLNLGSTVAQTVTAGNLTLTLASATAFENVIGGSLNDNIVGNTLANSLSGGAG 2397
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLS 392
++L +G+D +
Sbjct: 2398 NDNLTGGLGKDTLTGSTGLDTLTYN 2422
Score = 45.2 bits (105), Expect = 0.033, Method: Composition-based stats.
Identities = 37/305 (12%), Positives = 73/305 (23%), Gaps = 56/305 (18%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG+ D + G N+ GND DG + DT+ + L + + I
Sbjct: 2178 LVGTGFADALAGVGGNDTLSGLGGNDTLDGGANNDTYLFDTDLVLGSDRVIDASGIDTLN 2237
Query: 331 NEHKQDFLSDVER-------LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
++ + + + + + + ++++ +
Sbjct: 2238 FAATTTKTINLNLGSTVAQTVTAGNLTLTLASATAFENVIGGSLNDNIVGNTLANSLSGG 2297
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
D + D + + G D A T N + A
Sbjct: 2298 AGNDTLNGGANNDTYLFDTDLVLGSDRVIDASGIDTLNFA---ATTTKTINLNLGSTVAQ 2354
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
A + L A A A + V G + + G
Sbjct: 2355 TVTAGNLTLTLASATAFENVIGGSLNDNIVGN---------------------------- 2386
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
+L A +++L G D + E
Sbjct: 2387 ------------------TLANSLSGGAGNDNLTGGLGKDTLTGSTGLDTLTYNSLGESL 2428
Query: 564 SITFN 568
F+
Sbjct: 2429 LSGFD 2433
>gi|254422971|ref|ZP_05036689.1| Matrixin family [Synechococcus sp. PCC 7335]
gi|196190460|gb|EDX85424.1| Matrixin family [Synechococcus sp. PCC 7335]
Length = 439
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 62/383 (16%), Positives = 115/383 (30%), Gaps = 68/383 (17%)
Query: 28 IRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS---------- 77
+ Y D L + ITE + + W++ L F E
Sbjct: 39 LTYSYDNLLDGGIKGGITE--SEMRSAIEESFELWAQYAPLNFVEVDDTGRKSQSNPDAA 96
Query: 78 DIKFI------SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS-HNALHEIGH 130
DI+ S Y EI+FD ++ W A+HEIGH
Sbjct: 97 DIRIGYRTIDGSGGTLGEAALTYFGDLATEIDFDSSENWAIDQTDSAFDFLAVAVHEIGH 156
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
LGL H + + + D + DI
Sbjct: 157 TLGLNHESNKDAVMHPFASDIYSGLGTAFLY-----------------------SDDIEG 193
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
++ +YG K ++ +++ D ++G + + L ++
Sbjct: 194 IRALYG-----------------KGKGLVKPVFEVPNSDA--ALVLGTNADDVLLGSKRS 234
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + I ++V+G GND + G ++ F ++ ND DG G D+
Sbjct: 235 QTFQGLNGDDQIRAGEGSDTVIGDKGNDQLFGEGGDDELFGNANNDFLDGGEGNDSLIGE 294
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ Y + D L V+ +++ + + ++ L A +
Sbjct: 295 QGKDVLV----GGTGNDYLSGRKGSDTLVGVDN---SEKGVGKKGIGEKDTLIGGAQSDL 347
Query: 371 LIQVIGQDVFESMKHFYEFGLSE 393
+ F G S+
Sbjct: 348 FVLGNQAGSFYDDGLSDTVGTSD 370
>gi|288939989|ref|YP_003442229.1| outer membrane adhesin like proteiin [Allochromatium vinosum DSM 180]
gi|288895361|gb|ADC61197.1| outer membrane adhesin like proteiin [Allochromatium vinosum DSM 180]
Length = 3764
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 81/624 (12%), Positives = 156/624 (25%), Gaps = 81/624 (12%)
Query: 61 EWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN-----FDKADVWRYGIG 115
++ T S I + + P I D + G G
Sbjct: 3157 SYTDDAGFTNTVASAGQAITNVRDSFRLTEGPDTYDGRANPIAQVIEALGGNDTVQGGAG 3216
Query: 116 KGTILSHNALHEIGHALG---LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
+ + + G L + G D D + +
Sbjct: 3217 DDRLYGQDGDDSLNGQYGDDVLDGGAGNDRLTGGPGTDTVLGGDGDDWLGGGFGNDRQEG 3276
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
D + + P D++ S ++ +++++Q +I T + G D L
Sbjct: 3277 GDGNDVFAGNPSGDDVLDGGAGEDRADYSESSDAVRVDLRQSGPQWIST---ASGTDTLI 3333
Query: 233 LTLIGGVKNYIDL-----------NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
Y D E ++ G E + + + + G G D V+
Sbjct: 3334 SIEQLTGSAYADTLTGNTAANRLAGGEGDDTLSGQEGDDWLDGGAGNDRLTGGPGTDTVL 3393
Query: 282 ------------------GNSANNVFFES-SGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
G + N+VF + SG+DV DG +G D Y S ++ +
Sbjct: 3394 GGDGDDWLGGGFGNDRQEGGAGNDVFAGNPSGDDVLDGGAGEDRADYSESSDAVRVDLRQ 3453
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + D L +E+L + + L + L G D +
Sbjct: 3454 SGPQ-WISTASGTDTLISIEQLTGSAYADTLTGNTAANRLAGGEGDDTLSGQEGDDWLDG 3512
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G D N + + A +
Sbjct: 3513 GAGNDRLTGGPGTDTVLGGDGDDWLGGGFGNDRQEGGDGNDVFAGNPSGDDVLDGGAGED 3572
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ D + + ++ + L + G +
Sbjct: 3573 RADYSESSDAVRVDLRQSGPQWISTYSGTDTLISIEQLTGSAYADTLTGNTAANRLAGGE 3632
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
G+ D + L+ A ++ L G D
Sbjct: 3633 GDDTLS---------GQEGDDW--LDGGAGNDWLGGGSGTDILTGGTGVD---------- 3671
Query: 563 RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKS 622
+ F+ S D+ F + +S F + E
Sbjct: 3672 -TFVFDTVP-TISNIDVITDFNHAED---------------VIALSSAVFTAFTG-HEGE 3713
Query: 623 RDKADLSLSFDHKKVDLYTDYFGD 646
R + +L +++ LY D G
Sbjct: 3714 RVGQNANLFYNNFSGTLYYDADGS 3737
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 67/493 (13%), Positives = 121/493 (24%), Gaps = 34/493 (6%)
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISSNN-----GYVCTPRYDSRYFMEINFDKADVWRY 112
AL + F + A W+
Sbjct: 3063 ALVGVGATTTINFIGVNDAPTGSVTLDGTPAELQTLTANTSALGDLDGLTGASYAYQWQV 3122
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
GT S ++ A G H G V Y +D+ T+ ++ +
Sbjct: 3123 SANGGTSWS-----DLSGATGASHALDDTLGGRQVRVQVSYTDDAGFTNTVASAGQAITN 3177
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
+ SF P D A + + +Y GDD
Sbjct: 3178 VRDSFRLTEGPDTYDGRA-------NPIAQVIEALGGNDTVQGGAGDDRLYGQDGDD--- 3227
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+L G + + + G T+ + + G GND G N+VF +
Sbjct: 3228 -SLNGQYGDDVLDGGAGNDRLTGGPGTDTVLGGDGDDWLGGGFGNDRQEGGDGNDVFAGN 3286
Query: 293 -SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
SG+DV DG +G D Y S ++ ++ + + D L +E+L +
Sbjct: 3287 PSGDDVLDGGAGEDRADYSESSDAVRVDLRQSGPQ-WISTASGTDTLISIEQLTGSAYAD 3345
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ L + L G D + G D
Sbjct: 3346 TLTGNTAANRLAGGEGDDTLSGQEGDDWLDGGAGNDRLTGGPGTDTVLGGDGDDWLGGGF 3405
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
N + + A + + D + + +
Sbjct: 3406 GNDRQEGGAGNDVFAGNPSGDDVLDGGAGEDRADYSESSDAVRVDLRQSGPQWISTASGT 3465
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
+ + L + G + G+ D + L+ A
Sbjct: 3466 DTLISIEQLTGSAYADTLTGNTAANRLAGGEGDDTLS---------GQEGDDW--LDGGA 3514
Query: 532 SHEDLINAFADAP 544
++ L
Sbjct: 3515 GNDRLTGGPGTDT 3527
>gi|15485194|emb|CAC67448.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 60/492 (12%), Positives = 122/492 (24%), Gaps = 63/492 (12%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S D+ + G TI + LGL +G D
Sbjct: 282 GSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 341
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + +LG + Y
Sbjct: 342 SDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSREWVRKASALGVDYYDSVRNV 401
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
++ IG + + +++ G + T+ + + G
Sbjct: 402 ENV-------------------IGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFG 442
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----- 328
GND++ G++ N+ + G+D +G +G D F + V
Sbjct: 443 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAG 502
Query: 329 ---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+A D +S +E + + Q ++
Sbjct: 503 AHAGVATGRIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANV 562
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L + L G DV + + GRD + + D N
Sbjct: 563 LRGAGGADVLAGGEGDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANA------- 615
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ + G + A + + + + + + E
Sbjct: 616 --GNLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRHIENAVG 673
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
+ + + D + G + L A ++DL
Sbjct: 674 SVRDDVLI---GDAGANVLNGLTGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQG 730
Query: 542 DAPDLVQAGKDH 553
D L AG H
Sbjct: 731 DDTYLFGAGYGH 742
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/340 (13%), Positives = 87/340 (25%), Gaps = 37/340 (10%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV------- 297
+ SI G + +A + + G +GND ++G +N +G+DV
Sbjct: 158 IGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGV 217
Query: 298 ----FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------------DFLSDV 341
DG +G+DT Y + ++ + D + ++
Sbjct: 218 WSNQLDGGAGVDTVKYNVHQPSEERLERMGETGIHADLQKGTVEKWPALNLFSVDHVKNI 277
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E L + + + L + + G D+ +G DI
Sbjct: 278 ENLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQD 337
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
DD+ G D + + + +A
Sbjct: 338 DE--TVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSREWVRKASALGVDYY 395
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
++ ++ + +G D G G
Sbjct: 396 DSVRNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGD------------GDDLLFGG 443
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D L A ++ L D AG D F E
Sbjct: 444 DGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPARE 483
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 48/374 (12%), Positives = 92/374 (24%), Gaps = 38/374 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYN 141
+ T D D+ G G + + LG L +
Sbjct: 415 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGND 474
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++D + Y A+ +++D+ A + GS
Sbjct: 475 WFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLG-ILADLGAGRVDKLGEAGS 533
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + I G + + + G E +
Sbjct: 534 SAYDTVSGIENVVGTELADRI-------------TGDAQANVLRGAGGADVLAGGEGDDV 580
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------ 313
+ + + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 581 LLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAG 640
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ L +E + + + ++L + L
Sbjct: 641 AKGVFLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLTGNDVLSG 700
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G DV + G D DL G D Y + E
Sbjct: 701 GAGDDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGAGYGHDTIYE 747
Query: 434 GRNPDAFKALEYIA 447
+ A
Sbjct: 748 SGGGHDTIRINAGA 761
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/365 (11%), Positives = 74/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSREWVRKASALGVDYYDSV 398
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+VE + Q + + + L G D+
Sbjct: 399 RNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 458
Query: 390 GLSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 459 YGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLGILA 518
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 519 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 576
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G + L A + L D A G +
Sbjct: 577 ----------GDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGND 626
Query: 564 SITFN 568
++ F+
Sbjct: 627 TVDFS 631
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 28/183 (15%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV------KNYIDLNTESWSSIGGYE 257
+ + + + G+D +D + G ++ L S + E
Sbjct: 604 GDDWFFQDAANAGNLLD---GGDGNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPE 660
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + IE+ VGS +DV+IG++ NV +GNDV G +G D
Sbjct: 661 TSNVLRH---IENAVGSVRDDVLIGDAGANVLNGLTGNDVLSGGAGDD--VLLGDEGSDL 715
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ ++ +I E ++ + G
Sbjct: 716 LSGDAGNDDLFGGQGDDTYLF--------------GAGYGHDTIYESGGGHDTIRINAGA 761
Query: 378 DVF 380
D
Sbjct: 762 DQL 764
Score = 37.8 bits (86), Expect = 6.0, Method: Composition-based stats.
Identities = 12/119 (10%), Positives = 25/119 (21%)
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D L V+ + + L A + L G D +
Sbjct: 138 ELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGE 197
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D+ + D + + + + G
Sbjct: 198 GHNTVVGGAGDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGETGIHADLQ 256
>gi|291540389|emb|CBL13500.1| Uncharacterized vancomycin resistance protein [Roseburia
intestinalis XB6B4]
Length = 289
Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F A Y +++ D+ AF + A +HF N+G EGRS + FNP Y Y DL
Sbjct: 43 FDADYYRSAYPDVAAAFGNNK---AALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQ 99
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISGM 610
FG D +A +HY+T G EGR G +G
Sbjct: 100 AFGDDMAAYCRHYVTCGKAEGRDGGGTGS 128
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ F Y A + DL AF
Sbjct: 43 FDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFG 102
Query: 542 DAPDLVQAGKDHFSNFGYEEGRS 564
D A H+ G EGR
Sbjct: 103 DDM---AAYCRHYVTCGKAEGRD 122
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDL 495
F A Y +++ D+ AF + +HF N+G EGR F+ Y Y DL
Sbjct: 41 AVFDADYYRSAYPDVAAAFGNN---KAALFNHFVNYGLREGRSCSADFNPQAYRAKYADL 97
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDA 523
+ FG D A RHY+T G EGR+
Sbjct: 98 QQAFGDDMAAYCRHYVTCGKAEGRDGGG 125
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 2/109 (1%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYD 409
S Y ++Y D+ G + HF +GL EGR F+ Y Y
Sbjct: 36 RSAYQAVFDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYA 95
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
DL+ FG D A RHY+T G EGR+ ++ +
Sbjct: 96 DLQQAFGDDMAAYCRHYVTCGKAEGRDGGGTGSVSATTQTSAATVGQGN 144
Score = 60.6 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIASHEDLINAFA 457
FD+ Y +Y D+ FG+++ A H++ +G++EGR+ F Y A + DL AF
Sbjct: 43 FDADYYRSAYPDVAAAFGNNKAALFNHFVNYGLREGRSCSADFNPQAYRAKYADLQQAFG 102
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT 482
D + H+ G EGR
Sbjct: 103 DD---MAAYCRHYVTCGKAEGRDGG 124
>gi|15485192|emb|CAC67447.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
gi|15485196|emb|CAC67449.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 82.1 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 60/492 (12%), Positives = 122/492 (24%), Gaps = 63/492 (12%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S D+ + G TI + LGL +G D
Sbjct: 282 GSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 341
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + +LG + Y
Sbjct: 342 SDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSREWVRKASALGVDYYDSVRNV 401
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
++ IG + + +++ G + T+ + + G
Sbjct: 402 ENV-------------------IGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFG 442
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----- 328
GND++ G++ N+ + G+D +G +G D F + V
Sbjct: 443 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAG 502
Query: 329 ---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+A D +S +E + + Q ++
Sbjct: 503 AHAGVATGRIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANV 562
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L + L G DV + + GRD + + D N
Sbjct: 563 LRGAGGADVLAGGEGDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANA------- 615
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ + G + A + + + + + + E
Sbjct: 616 --GNLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRHIENAVG 673
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
+ + + D + G + L A ++DL
Sbjct: 674 SVRDDVLI---GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQG 730
Query: 542 DAPDLVQAGKDH 553
D L AG H
Sbjct: 731 DDTYLFGAGYGH 742
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/340 (13%), Positives = 87/340 (25%), Gaps = 37/340 (10%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV------- 297
+ SI G + +A + + G +GND ++G +N +G+DV
Sbjct: 158 IGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGEGHNTVVGGAGDDVFLQDLGV 217
Query: 298 ----FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ------------DFLSDV 341
DG +G+DT Y + ++ + D + ++
Sbjct: 218 WSNQLDGGAGVDTVKYNVHQPSEERLERMGETGIHADLQKGTVEKWPALNLFSVDHVKNI 277
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E L + + + L + + G D+ +G DI
Sbjct: 278 ENLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQD 337
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
DD+ G D + + + +A
Sbjct: 338 DE--TVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSREWVRKASALGVDYY 395
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
++ ++ + +G D G G
Sbjct: 396 DSVRNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGD------------GDDLLFGG 443
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D L A ++ L D AG D F E
Sbjct: 444 DGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPARE 483
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 93/374 (24%), Gaps = 38/374 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYN 141
+ T D D+ G G + + LG L +
Sbjct: 415 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGND 474
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++D + Y A+ +++D+ A + GS
Sbjct: 475 WFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLG-ILADLGAGRVDKLGEAGS 533
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + I G + + + G E +
Sbjct: 534 SAYDTVSGIENVVGTELADRI-------------TGDAQANVLRGAGGADVLAGGEGDDV 580
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------ 313
+ + + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 581 LLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAG 640
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ L +E + + + ++L A + L
Sbjct: 641 AKGVFLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSG 700
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G DV + G D DL G D Y + E
Sbjct: 701 GAGDDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGAGYGHDTIYE 747
Query: 434 GRNPDAFKALEYIA 447
+ A
Sbjct: 748 SGGGHDTIRINAGA 761
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/365 (11%), Positives = 74/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSREWVRKASALGVDYYDSV 398
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+VE + Q + + + L G D+
Sbjct: 399 RNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 458
Query: 390 GLSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 459 YGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLGILA 518
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 519 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 576
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G + L A + L D A G +
Sbjct: 577 ----------GDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGND 626
Query: 564 SITFN 568
++ F+
Sbjct: 627 TVDFS 631
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 28/183 (15%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV------KNYIDLNTESWSSIGGYE 257
+ + + + G+D +D + G ++ L S + E
Sbjct: 604 GDDWFFQDAANAGNLLD---GGDGNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPE 660
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + IE+ VGS +DV+IG++ NV +GNDV G +G D
Sbjct: 661 TSNVLRH---IENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGDD--VLLGDEGSDL 715
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ ++ +I E ++ + G
Sbjct: 716 LSGDAGNDDLFGGQGDDTYLF--------------GAGYGHDTIYESGGGHDTIRINAGA 761
Query: 378 DVF 380
D
Sbjct: 762 DQL 764
Score = 37.8 bits (86), Expect = 6.1, Method: Composition-based stats.
Identities = 12/119 (10%), Positives = 25/119 (21%)
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D L V+ + + L A + L G D +
Sbjct: 138 ELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGE 197
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D+ + D + + + + G
Sbjct: 198 GHNTVVGGAGDDVFLQDLGVWSNQLDGGAGVDTVKYNVHQPSEERLERMGETGIHADLQ 256
>gi|110633150|ref|YP_673358.1| hemolysin-type calcium-binding region [Mesorhizobium sp. BNC1]
gi|110284134|gb|ABG62193.1| Hemolysin-type calcium-binding region [Chelativorans sp. BNC1]
Length = 795
Score = 82.1 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/313 (15%), Positives = 87/313 (27%), Gaps = 31/313 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ +P I GDD +D + + I + + + +
Sbjct: 321 DDLILGTPCADEIDAGCGDDNID----SRGGDDLISAGPGNDHIVAGAGDDVVHAGSGDD 376
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
V G +GND + G S N+ + G+D G +G DT A
Sbjct: 377 IVFGGAGNDHLAGESGNDRLYGQDGDDFLFGDAGDDTL-------------HGGAGRDIL 423
Query: 330 ANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ D L E L + + +L+ + L G DV
Sbjct: 424 HGDDGHDSLKGGEDEDILLAGAGDDTADGGEGADLLDGAEGDDWLQGRAGDDVLLDGPGA 483
Query: 387 YEFGLSEGRDITFDSYLYLG---------SYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
+ +G D ++ D + G
Sbjct: 484 DKVEGGDGNDRVVPTHDGTADRFDGGKGHDTLDYASTEARVAVDLESGTAKIGESPDDLV 543
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG-SYDDLR 496
F A+ A+ ++L + G D G ++ + S D+
Sbjct: 544 SCFDAVVGGAADDELKGSAGGEKLDGGAGDDILDGKGGQDTLLGGAGDDVIADGSGSDVI 603
Query: 497 NVF-GSDRGAAAR 508
+ G+DR +AA
Sbjct: 604 DAGDGNDRISAAA 616
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/333 (12%), Positives = 86/333 (25%), Gaps = 19/333 (5%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S I G + I + + G+D + +++ GND +G D +
Sbjct: 313 SFIEGSPADDLILGTPCADEIDAGCGDDNIDSRGGDDLISAGPGNDHIVAGAGDD--VVH 370
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
A S ++ + + + + + D + F D R IL ++
Sbjct: 371 AGSGDDIVFGGAGNDHLAGESGNDRLYGQDGDDFLFGDAGDDTLHGGAGRDILHGDDGHD 430
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDIT----FDSYLYLGSYDDLR-------NVFGSD 418
L +D+ + EG D+ D +L + DD+ V G D
Sbjct: 431 SLKGGEDEDILLAGAGDDTADGGEGADLLDGAEGDDWLQGRAGDDVLLDGPGADKVEGGD 490
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
L+Y ++ + + D +
Sbjct: 491 GNDRVVPTHDGTADRFDGGKGHDTLDYASTEARVAVDLESGTAKIGESPDDLVSCFDAVV 550
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
D + L G D G + + + +
Sbjct: 551 GGAADDELKGSAGGEKLDGGAGDDILDGKG-----GQDTLLGGAGDDVIADGSGSDVIDA 605
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
+ A D G E ++ ++
Sbjct: 606 GDGNDRISAAADGDDDHYDGAEGCDTLDYSQTS 638
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/387 (13%), Positives = 98/387 (25%), Gaps = 70/387 (18%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ D G G + + + + G H +G +YG
Sbjct: 340 DNIDSRGGDDLISAGPGNDHIVAGAGDDVVHAGSGDDIVFGGAGNDHLAGESGNDRLYGQ 399
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
D D ++G
Sbjct: 400 DGD---------------------------------------DFLFGDA----------G 410
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ ++ G D +L GG I L + G E + +
Sbjct: 411 DDTLHGGAGRDILHGDDGHD----SLKGGEDEDILLAGAGDDTADGGEGADLLDGAEGDD 466
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGN-----------DVFDGSSGLDTFFYYAPSYLYKI 318
+ G +G+DV++ + GN D FDG G DT Y + +
Sbjct: 467 WLQGRAGDDVLLDGPGADKVEGGDGNDRVVPTHDGTADRFDGGKGHDTLDYASTEARVAV 526
Query: 319 YRFENAIIVYDANEHKQDFLSDV------ERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ + V + L+ + IL+ + L+
Sbjct: 527 DLESGTAKIGESPDDLVSCFDAVVGGAADDELKGSAGGEKLDGGAGDDILDGKGGQDTLL 586
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G DV +G D + + D + + +T +K
Sbjct: 587 GGAGDDVIADGSGSDVIDAGDGNDRISAAADGDDDHYDGAEGCDTLDYSQTSQGVTVDLK 646
Query: 433 EGRNPDAFKALEYIASHEDLINAFADA 459
EG + I S E++I +
Sbjct: 647 EGLACGEETGRDTIVSMENVIGGTGND 673
Score = 40.9 bits (94), Expect = 0.74, Method: Composition-based stats.
Identities = 35/278 (12%), Positives = 72/278 (25%), Gaps = 24/278 (8%)
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
DG +D Y++ S + + +I+ + D + +
Sbjct: 297 DGEFSVDQVAYFSVSKSFIEGSPADDLILGTPCADEIDAGCGDDNIDSRGGDDLISAGPG 356
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNV 414
+ A + + G D+ G D + D +L+ + DD +
Sbjct: 357 NDHIVAGAGDDVVHAGSGDDIVFGGAGNDHLAGESGNDRLYGQDGDDFLFGDAGDDTLHG 416
Query: 415 FGSDRGAAAR---HYITHGVKEG--RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ G E + + L A D + G D
Sbjct: 417 GAGRDILHGDDGHDSLKGGEDEDILLAGAGDDTADGGEGADLLDGAEGDDWLQGRAGDDV 476
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH---------------G 514
+ + + + ++D + F +G Y + G
Sbjct: 477 LLDGPGADKVEGGDGNDRVVPTHDGTADRFDGGKGHDTLDYASTEARVAVDLESGTAKIG 536
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
F A+ A+ ++L + AG D
Sbjct: 537 ESPDDLVSCFDAVVGGAADDELKGSAGGEKLDGGAGDD 574
>gi|83312521|ref|YP_422785.1| hypothetical protein amb3422 [Magnetospirillum magneticum AMB-1]
gi|82947362|dbj|BAE52226.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
Length = 9529
Score = 82.1 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 63/355 (17%), Positives = 102/355 (28%), Gaps = 56/355 (15%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
I + +N S +D G G T +A I L
Sbjct: 2213 ITELEGSNFADVLSGAASGQSGLEGGAGSDTLTGGTGFVTASYKHAAAGIIANLSGSSYL 2272
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
G V + + ++++ + S T DI GA
Sbjct: 2273 GVAAGKAVDSYYVNGTLTAGTDTLVNIQGVRGSSFADHIKGGDTAAYYDI---VGGGGAD 2329
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-------------GVKNYIDL 245
GN+ V D T+ G D + + L
Sbjct: 2330 VLVAGNSAVNFRVSTTDGA---TVTGGAGIDSIAFDDFTSGTLNNATAFAHVTGVETLRL 2386
Query: 246 NTESWS----------------------------SIGGYEKNMTIAQHTVIESVVGSSGN 277
+ S S + +T+A + +++VG SGN
Sbjct: 2387 SGGSLSQAVNLDSTGNVASITRVDASGDTGDLLVNAASRTGAVTVASGSGADTLVGGSGN 2446
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD-----ANE 332
DV+ G S + F GND+ +G SG D + + Y+I + V D
Sbjct: 2447 DVLSGGSGADTFTGGLGNDIINGGSGADKAIFSGAAADYRISMTNGTVTVVDTNPTLNGN 2506
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D LS +E L+F+D+ + +S A L+ G + H
Sbjct: 2507 DGTDTLSGIETLQFSDRSFTLGSGSGQSAGGGLA----LVGAAGSGISLVDSHTA 2557
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 88/279 (31%), Gaps = 33/279 (11%)
Query: 175 ASFGYCATPMVSDIVA--VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
+ T + + A + G G+ +++ D T+ G D L
Sbjct: 3562 TGYSASTTALNGTVAADTLDVGSGFATIDAGDGNDIVKMNVVDLSQAATVIGGLGTDKLV 3621
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE----------------------S 270
L+ G ES G +++ + + +
Sbjct: 3622 LSGTGAASLSKLSGVESVELTGSGAVALSLGAGSGVSTLDASASTGSLALDASAATGALN 3681
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--- 327
V+ SG ++G N+ F SGND+F+G +G DT ++ + Y I ++V
Sbjct: 3682 VIAGSGATSLLGGVGNDTFTGGSGNDLFNGGTGTDTAKFHGNAAGYSIRAASGGVVVQDT 3741
Query: 328 -YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD-----VFE 381
D L+ VE L FAD+ + + + + + G
Sbjct: 3742 NTVDGNDGTDSLAGVETLVFADRTLTLSGSSLSPVATVGTATQVNVMDAGNQAPNAITAL 3801
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ + S +D + Y+ N G++
Sbjct: 3802 ADGGYLVSWQSLDQDAVGNWGNIAQRYNAAGNKVGAEFV 3840
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/288 (17%), Positives = 87/288 (30%), Gaps = 16/288 (5%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
++ + +G + ++ A + + + G
Sbjct: 2892 AEGAATFNGSGGSLSITGGGSAYLYGVEQVAFSDAKTVSVDNKGGYLT---LTGGTGADV 2948
Query: 137 PG-SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G ND + +SV + S ++SD + +
Sbjct: 2949 INVGSGISSVLGGAGNDTLTATGTSSVTTLDGGSGSDTLTGGAGNDIFILSDFSSTDSVN 3008
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G GN++ ++ + G ++L L G + + + SS G
Sbjct: 3009 GG----AGNDVLRLTFTTTGVVADSAFTNIHGVEVLTLAASGA---PLSVAMGTVSSGAG 3061
Query: 256 YEKNMTIAQHTVIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ + + G VIG + F SGNDVFDG G D ++
Sbjct: 3062 FSILDALNTDAGVAVDATGRGAPLTVIGGFGADTFTGGSGNDVFDGGFGADQARFHGNLD 3121
Query: 315 LYKIYRFENAIIVYD----ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
Y+I + V D D LS VE L FAD+ +
Sbjct: 3122 GYRISTGTGGVTVTDINTVGGNDGTDTLSGVETLVFADRTLTLSGTVG 3169
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 65/223 (29%), Gaps = 41/223 (18%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY---IDLNTESWSSIGGYEKNMTIAQHTVI 268
P I T+ + T G + IDL+ +S + G T+ I
Sbjct: 4131 TGDTQPQIATLANGDVVVTYVGTGTSGDDVFRQVIDLSYDSV-VLTGTSAADTLNVGDGI 4189
Query: 269 ESVVGSSGNDVVIGNSANNV-FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
SV G +GND++ S V +G+D G +G DTF S + I+
Sbjct: 4190 ASVDGGAGNDIITTTSGGGVTLNGGAGSDTLTGGTGNDTFILSDISSADSVNGGAGKDIL 4249
Query: 328 YDANEHKQ-------DFLSDVERLRF-----------------------------ADQCI 351
+ +VE L A+ +
Sbjct: 4250 SLNFTSGGVVVDSAFTNVGNVETLMLGVSGSPLSLTMGPLASGSGITTVDAHLSTANVTL 4309
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
++ L + + LI G DV F S G
Sbjct: 4310 SALADSAVQTLIGGMANDTLIAGAGGDVLTGNAGADTFVFSAG 4352
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 70/276 (25%), Gaps = 26/276 (9%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
G + +D + + + + +D +++Q GA +
Sbjct: 2841 GSGLSTIDASTNSGTVSLDASAVSSGVTLLAGTGTTSMMGGAGTDTISLQMAEGAATFNG 2900
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + S ++ + D +++ I ++
Sbjct: 2901 SGG--SLSITGGGSAYLYGVEQVAFSDAKTVSVDNKGGYLTLTGGTGADVINVGSGISSV 2958
Query: 263 AQHTVIES--VVGSSGNDVVIGNSANNVFFESSGNDVF-----------DGSSGLD---- 305
++ G+S + G S ++ +GND+F +G +G D
Sbjct: 2959 LGGAGNDTLTATGTSSVTTLDGGSGSDTLTGGAGNDIFILSDFSSTDSVNGGAGNDVLRL 3018
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEH-----KQDFLSDVERLRFADQCIDSVNVKQRS 360
TF ++ A +S D V +
Sbjct: 3019 TFTTTGVVADSAFTNIHGVEVLTLAASGAPLSVAMGTVSSGAGFSILDALNTDAGVAVDA 3078
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ +I G D F F G D
Sbjct: 3079 T--GRGAPLTVIGGFGADTFTGGSGNDVFDGGFGAD 3112
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 71/558 (12%), Positives = 129/558 (23%), Gaps = 77/558 (13%)
Query: 28 IRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNG 87
+ + T N N +A A +++ S + S +
Sbjct: 1977 LTLSFSTTGGGHIQVVDTPANVNTATIAALAAHGITEIA------LSNSGTVSLTSGSGS 2030
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
+ ++ + IL G + G
Sbjct: 2031 ASLIGGSGNDTYVAAATASGTLTIIDTAGSNILD-----------GSKVGDAGFKGARQV 2079
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC---ATPMVSDIVAVQKIYGAPKGSLGN 204
G D + + Q + A G +T S VA G GS+G+
Sbjct: 2080 GNDLVIDLSANAGGGQLVVKDQYAGTGAGIGSILTGSTHSPSSAVATSLTGGTLTGSIGD 2139
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG---------- 254
+I+ + T+ +GG+D L S +
Sbjct: 2140 DIFAYN------AAVTTMVGNGGEDTFFAGGANQTITGDSLAGGKVSFVYAAGPVTASLV 2193
Query: 255 ----GYEKNMTIAQHTV--IESVVGSSGNDVVIGN-SANNVFFESSGNDVFDGSSGLDTF 307
T+ I + GS+ DV+ G S + +G+D G +G T
Sbjct: 2194 GGVATLTGGTATYTDTLTYITELEGSNFADVLSGAASGQSGLEGGAGSDTLTGGTGFVTA 2253
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y + ++ + A + + + D ++ V+ S ++
Sbjct: 2254 SYKHAAAGIIANLSGSSYLGVAAGKAVDSYYVNGTLTAGTDTLVNIQGVRGSSFADHIKG 2313
Query: 368 YE-----DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ D++ G DV + F + + G D A
Sbjct: 2314 GDTAAYYDIVGGGGADVLVAGNSAVNF------------RVSTTDGATVTGGAGIDSIAF 2361
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
S L A G +
Sbjct: 2362 DDFTSGTLNNATAFAHVTGVETLRLSGGSLSQAVNLDST----------------GNVAS 2405
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
G DL + R A G L + + +
Sbjct: 2406 ITRVDASGDTGDLLVN-AASRTGAVTVASGSGADTLVGGSGNDVLSGGSGADTFTGGLGN 2464
Query: 543 APDLVQAGKDHFSNFGYE 560
+G D G
Sbjct: 2465 DIINGGSGADKAIFSGAA 2482
>gi|284052095|ref|ZP_06382305.1| hemolysin-type calcium-binding region [Arthrospira platensis str.
Paraca]
Length = 564
Score = 82.1 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/309 (15%), Positives = 86/309 (27%), Gaps = 21/309 (6%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA------ 190
P + + + +Y D F Y T +A
Sbjct: 187 PDGDTLSVQNFSSTANGSLIFNGAGIFTYRPNPDFFGTDGFSYNVTDGTDSDLAQVVISV 246
Query: 191 -----VQKIYGAPKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
Q I G +G+ G++ + TI+ G+DLL G +
Sbjct: 247 QPGDFAQIIEGIGQGTTGDDSIIGSSGDDVINGLAGNDTIFGLAGNDLL----QGDEGDD 302
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + ++ G N T + ++G GND++ GN N+ G D G
Sbjct: 303 LLFGNQGNDTLDGGPGNDTAYGGQDNDLMIGGDGNDLLFGNLGNDTLLGGPGADSMYGGD 362
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF-ADQCIDSVNVKQRSI 361
G D I+ + I++ + + + + + L F D
Sbjct: 363 GNDCIR--GGVGNDLIFGDKGNDILWGDDGNDTIYGGEGDDLIFGNDGADLLFGGVGNDT 420
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + +I G D G D + GS A
Sbjct: 421 IFGGPGNDTIIGGEGDDQIAGEVGDDLLFGGPGADTLTGGSGSDTFAIAEGSGGGSVEEA 480
Query: 422 AARHYITHG 430
+ T G
Sbjct: 481 NVINDFTGG 489
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/289 (15%), Positives = 78/289 (26%), Gaps = 33/289 (11%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A Y G + + V + + S + + I T
Sbjct: 210 AGIFTYRPNPDFFGTDGFSYNVTDGTDSDLAQVVIS-----VQPGDFAQIIEGIGQGTTG 264
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
SI G + I +++ G +GND++ G+ +++ F + GND DG G DT +
Sbjct: 265 DDSIIGSSGDDVINGLAGNDTIFGLAGNDLLQGDEGDDLLFGNQGNDTLDGGPGNDTAY- 323
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
D L + + +
Sbjct: 324 ------------GGQDNDLMIGGDGNDLLFG------NLGNDTLLGGPGADSMYGGDGND 365
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ +G D+ K +G D Y G DDL +FG+D +
Sbjct: 366 CIRGGVGNDLIFGDKGNDILWGDDGNDTI-----YGGEGDDL--IFGNDGADLL--FGGV 416
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
G + + + D G D + +
Sbjct: 417 GNDTIFGGPGNDTIIGGEGDDQIAGEVGDDLLFGGPGADTLTGGSGSDT 465
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 78/268 (29%), Gaps = 12/268 (4%)
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
+ D G I I G G ++G + D
Sbjct: 258 IGQGTTGDDSIIGSSGDDVINGLAGNDTIFGLAGNDLLQGDEGDDLLFGNQGNDTLDGGP 317
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY-----KIEVQQK 214
+ +Y + +M G + GA G+
Sbjct: 318 GNDTAYGGQDNDLMIGGDGNDLLFGNLGNDTLLGGPGADSMYGGDGNDCIRGGVGNDLIF 377
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
++ G+D + GG + + + + G N TI ++++G
Sbjct: 378 GDKGNDILWGDDGNDTI----YGGEGDDLIFGNDGADLLFGGVGNDTIFGGPGNDTIIGG 433
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D + G +++ F G D G SG DTF S + N I + K
Sbjct: 434 EGDDQIAGEVGDDLLFGGPGADTLTGGSGSDTFAIAEGSGGGSVEE-ANVINDFTGGTDK 492
Query: 335 QDFLSD--VERLRFADQCIDSVNVKQRS 360
L + E+L ++ N R+
Sbjct: 493 IGLLGNLTFEQLSITQSEENAGNAIIRN 520
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 35/255 (13%), Positives = 62/255 (24%), Gaps = 47/255 (18%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++G+D +IG+S ++V +GND G +G D
Sbjct: 261 GTTGDDSIIGSSGDDVINGLAGNDTIFGLAGND--------------------------- 293
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
L+ + + L+ + D+ +
Sbjct: 294 ----------LLQGDEGDDLLFGNQGNDTLDGGPGNDTAYGGQDNDLMIGGDGNDLLFGN 343
Query: 393 EGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFKAL 443
G D DS D +R G+D + + G + +
Sbjct: 344 LGNDTLLGGPGADSMYGGDGNDCIRGGVGNDLIFGDKGNDILWGDDGNDTIYGGEGDDLI 403
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF-DSYLYLGSYDDLRNVFGSD 502
+ L + G D ++ D L+ G D
Sbjct: 404 FGNDGADLLFGGVGNDTIFGGPGNDTIIGGEGDDQIAGEVGDDLLFGGPGADTLTGGSGS 463
Query: 503 RGAAARHYITHGVKE 517
A G E
Sbjct: 464 DTFAIAEGSGGGSVE 478
Score = 47.1 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 28/261 (10%), Positives = 66/261 (25%), Gaps = 24/261 (9%)
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL-RFADQCIDSVNVKQRSILEYT 365
FF ++ + + DF +E + + + ++
Sbjct: 221 FFGTDGFSYNVTDGTDSDLAQVVISVQPGDFAQIIEGIGQGTTGDDSIIGSSGDDVINGL 280
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A + + + G D+ + + ++G D +Y N
Sbjct: 281 AGNDTIFGLAGNDLLQGDEGDDLLFGNQGNDTLDGGPGNDTAYGGQDNDLMIGGDGNDLL 340
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ G ++ ++ + + F + G + +
Sbjct: 341 FGNLGNDTLLGGPGADSMYGGDGNDCIRGGVGNDLI--------FGDKGNDILWGDDGND 392
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
+Y G DDL + G + ++ +I D
Sbjct: 393 TIYGGEGDDLI-------------FGNDGADLLFGGVGNDTIFGGPGNDTIIGGEGDDQI 439
Query: 546 LVQAGKDHFSNFGYEEGRSIT 566
+ G D FG ++T
Sbjct: 440 AGEVGDD--LLFGGPGADTLT 458
>gi|119484709|ref|ZP_01619191.1| Polymorphic membrane protein [Lyngbya sp. PCC 8106]
gi|119457527|gb|EAW38651.1| Polymorphic membrane protein [Lyngbya sp. PCC 8106]
Length = 2103
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 72/267 (26%), Gaps = 37/267 (13%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A + + + + F+ G+D L G N I + + + G
Sbjct: 1789 AISTNASDRVIGTSADNQMFGFL-------GEDTL----FAGEGNDIVIANNNNDFLSGD 1837
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------Y 309
E N T+ +++ SG D G+ + + +G D G G D F
Sbjct: 1838 EGNDTLHGGQGNDTLQMGSGQDQGFGDQGEDYIYGENGEDRLYGGEGNDRLFADDGNDWV 1897
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER------------LRFADQCIDSVNVK 357
S I +Y QD L +
Sbjct: 1898 NGNSEADYISGNSGNDTLYGG--KGQDTLQGGTDHDSIEGNLAEDWIEGNAGNDHLWGNA 1955
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT----FDSYLYLGSYDD-LR 412
L ++ L G D + E + G D + L G DD L
Sbjct: 1956 GDDTLSGNRDHDILFGGDGNDWLDGNAGEDEIFGNFGDDTLDGGEGNDRLLGGDGDDWLV 2015
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDA 439
G D + V EGR D
Sbjct: 2016 GEEGEDTLSGGEGNDRFFVSEGRGLDV 2042
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/258 (17%), Positives = 75/258 (29%), Gaps = 46/258 (17%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA--PKG 200
+ D ND+ + + S D FG + ++YG
Sbjct: 1828 NNNNDFLSGDEGNDTLHGGQGNDTLQMGSGQDQGFGDQGEDYIYGENGEDRLYGGEGNDR 1887
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++ + I + G+D L GG SI G
Sbjct: 1888 LFADD---GNDWVNGNSEADYISGNSGNDTL----YGGKGQDTLQGGTDHDSIEGNLAED 1940
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + + + G++G+D + GN +++ F GND DG++G D F
Sbjct: 1941 WIEGNAGNDHLWGNAGDDTLSGNRDHDILFGGDGNDWLDGNAGEDEIF------------ 1988
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L E L + L+ G+D
Sbjct: 1989 ----------GNFGDDTLDGGE---------------GNDRLLGGDGDDWLVGEEGEDTL 2023
Query: 381 ESMKHFYEFGLSEGRDIT 398
+ F +SEGR +
Sbjct: 2024 SGGEGNDRFFVSEGRGLD 2041
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/249 (18%), Positives = 78/249 (31%), Gaps = 20/249 (8%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I ++T + + G + + +++ GND+VI N+ N+ GND G
Sbjct: 1788 IAISTNASDRVIGTSADNQMFGFLGEDTLFAGEGNDIVIANNNNDFLSGDEGNDTLHGGQ 1847
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQR 359
G DT + F + Y E+ +D L E RL D +
Sbjct: 1848 GNDTLQMGSGQDQ----GFGDQGEDYIYGENGEDRLYGGEGNDRLFADDGNDWVNGNSEA 1903
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE---------GRDITFDSYLY--LGSY 408
+ + + L GQD + + G D + + L
Sbjct: 1904 DYISGNSGNDTLYGGKGQDTLQGGTDHDSIEGNLAEDWIEGNAGNDHLWGNAGDDTLSGN 1963
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
D +FG D G E L+ ++ L+ D + + G+D
Sbjct: 1964 RDHDILFGGDGNDWLD--GNAGEDEIFGNFGDDTLDGGEGNDRLLGGDGDDWLVGEEGED 2021
Query: 469 HFSNFGCEE 477
S +
Sbjct: 2022 TLSGGEGND 2030
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 75/261 (28%), Gaps = 14/261 (5%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + F+ + + + I + D G T+ + G
Sbjct: 1803 ADNQMFGFLGEDTLFA-----GEGNDIVIANNNNDFLSGDEGNDTLHGGQGNDTLQMGSG 1857
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G +YG + + + + + ++ + S +
Sbjct: 1858 QDQGFGDQGEDYIYGENGEDRLYGGEGNDRLFADDGNDWVNGNSEADYISGNSGNDTLYG 1917
Query: 194 IYGAPKGSLGNNIYKIEVQ-----QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
G G + IE + + ++ + GDD L G + I +
Sbjct: 1918 GKGQDTLQGGTDHDSIEGNLAEDWIEGNAGNDHLWGNAGDDTL----SGNRDHDILFGGD 1973
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G I + +++ G GND ++G ++ G D G G D FF
Sbjct: 1974 GNDWLDGNAGEDEIFGNFGDDTLDGGEGNDRLLGGDGDDWLVGEEGEDTLSGGEGNDRFF 2033
Query: 309 YYAPSYLYKIYRFENAIIVYD 329
L + FE +
Sbjct: 2034 VSEGRGLDVLLDFEKGEDMIV 2054
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 48/298 (16%), Positives = 72/298 (24%), Gaps = 47/298 (15%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ ++ +D VIG SA+N F G D G D
Sbjct: 1789 AISTNASDRVIGTSADNQMFGFLGEDTLFAGEGNDIVI---------------------- 1826
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ DFLS E L + L GQD +
Sbjct: 1827 ANNNNDFLSGDE---------------GNDTLHGGQGNDTLQMGSGQDQGFGDQGEDYIY 1871
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G D + + D N + + A G L+ H+
Sbjct: 1872 GENGEDRLYGGEGNDRLFADDGNDWVNGNSEADYISGNSGNDTLYGGKGQDTLQGGTDHD 1931
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ A+ G DH ++ D D L G D
Sbjct: 1932 SIEGNLAEDWIEGNAGNDHLWGNAGDDTLSGNRDHDILFGGDGNDWLDGNAGEDEI---- 1987
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ G + L + L+ + G D F EGR +
Sbjct: 1988 -FGNFGDDTLDGGEGNDRLLGGDGDDWLVGEEGEDTLSGGEGNDRFF---VSEGRGLD 2041
>gi|260575603|ref|ZP_05843601.1| hlyA-like protein [Rhodobacter sp. SW2]
gi|259022246|gb|EEW25544.1| hlyA-like protein [Rhodobacter sp. SW2]
Length = 1033
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 49/342 (14%), Positives = 88/342 (25%), Gaps = 26/342 (7%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
L + + I GG D + + L + GG
Sbjct: 582 TAGLSGTGNALNNVITGTLGNNLINGLGGVDTASYAAATTGVS-VSLAVAGAQATGGGGS 640
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ I+ IE++ GS ND + G++ N GND G G D F + + +
Sbjct: 641 DTLIS----IENLTGSGANDSLTGDALANTLNGGLGNDTLTGGDGNDVFVVDSAADVIVE 696
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFAD-------------------QCIDSVNVKQR 359
+ + + + +E L + +
Sbjct: 697 SAAVSGGVDTVVSAVTWTLGALLENLILSGVALINGTGNTKANVLTGNAAANVLSGLAGN 756
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+ A + ++ +G D + +G D + G D
Sbjct: 757 DSITGGAGNDSVLGGLGDDRLDGGTGNDTLTGGDGNDSYLVDSSADVIVESATVAGGVDT 816
Query: 420 GAAARHYITHGVKEGRN--PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
A + E A +++ L A + G D + +
Sbjct: 817 VNATVTWALGATLENLTLGGTATINGSGNSANNALTGNAAANVLVGNAGNDTLNGGLGND 876
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
+ + G VF S GA T G R
Sbjct: 877 TLTGGAGTDVLTGGGGADAFVFNSTVGADVVTDFTSGSDRLR 918
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 85/308 (27%), Gaps = 24/308 (7%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ +G + D+ D G G + +A I + G
Sbjct: 650 TGSGANDSLTGDALANTLNGGLGNDTLTGGDGNDVFVVDSAADVI-----VESAAVSGGV 704
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
V ++S + + +++++ + G G
Sbjct: 705 DTVVSAVTWTLGALLENLILSGVALINGTGNTKANVLTGNAAANVLSGLAGNDSITGGAG 764
Query: 204 NNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG------ 254
N+ + + T+ G+D + V ++
Sbjct: 765 NDSVLGGLGDDRLDGGTGNDTLTGGDGNDSYLVDSSADVIVESATVAGGVDTVNATVTWA 824
Query: 255 ----------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
G + + ++ ++ G++ +V++GN+ N+ GND G +G
Sbjct: 825 LGATLENLTLGGTATINGSGNSANNALTGNAAANVLVGNAGNDTLNGGLGNDTLTGGAGT 884
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D + + A +V D + L D + N +
Sbjct: 885 DVLTGGGGADAFVFNSTVGADVVTDFTSGSDRLRVSMASLPVGDGDLLIENSSLTAATGG 944
Query: 365 TASYEDLI 372
++ +L+
Sbjct: 945 FSAAAELV 952
>gi|126355|sp|P16462|LKTA_ACTAC RecName: Full=Leukotoxin; Short=Lkt
gi|141834|gb|AAA21922.1| leukotoxin (LtA) [Aggregatibacter actinomycetemcomitans]
Length = 1050
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 49/140 (35%), Gaps = 12/140 (8%)
Query: 192 QKIYGAPKG-----SLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
K YG+ G+++ Y + + I+ G+D L GG N
Sbjct: 727 DKFYGSKFNDVFHGHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKL----YGGAGNDR 782
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + G E + + + + G SGND + GN +++ G+D G G
Sbjct: 783 LFGEYGNNYLDGGEGDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLDGGEGDDQLAGGEG 842
Query: 304 LDTFFYYAPSYLYKIYRFEN 323
D + Y + I
Sbjct: 843 NDIYVYRKEYGHHTITEHSG 862
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 43/129 (33%), Gaps = 9/129 (6%)
Query: 219 IQTIYDSGGDDLLDLTLIGG-----VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
++ I S D + + + + + G N I + + G
Sbjct: 717 VEEIIGSNLRDKFYGSKFNDVFHGHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKLYG 776
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+GND + G NN G+D +G +G D S K++ + ++
Sbjct: 777 GAGNDRLFGEYGNNYLDGGEGDDHLEGGNGSDILR--GGSGNDKLFGNQGDDLL--DGGE 832
Query: 334 KQDFLSDVE 342
D L+ E
Sbjct: 833 GDDQLAGGE 841
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 48/142 (33%), Gaps = 7/142 (4%)
Query: 200 GSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSS 252
+L + Y IY GDD L GG N
Sbjct: 723 SNLRDKFYGSKFNDVFHGHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKLYGGAGNDR 782
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + + + G +G+D++ G S N+ F + G+D+ DG G D
Sbjct: 783 LFGEYGNNYLDGGEGDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLDGGEGDDQLAGGEG 842
Query: 313 SYLYKIYRFENAIIVYDANEHK 334
+ +Y + + + + K
Sbjct: 843 NDIYVYRKEYGHHTITEHSGDK 864
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 52/170 (30%), Gaps = 23/170 (13%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++GS+ D G+ N+VF G+D+ G G D + + +I+ + +
Sbjct: 717 VEEIIGSNLRDKFYGSKFNDVFHGHDGDDLIYGYDGDDRLY--GDNGNDEIHGGQGNDKL 774
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
Y + RL + LE + L G D +
Sbjct: 775 YGGAGND--------RLFGEYGNNYLDGGEGDDHLEGGNGSDILRGGSGNDKLFGNQGDD 826
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
EG D L G+D + Y H + E
Sbjct: 827 LLDGGEGDD-------------QLAGGEGNDIYVYRKEYGHHTITEHSGD 863
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 52/239 (21%), Gaps = 57/239 (23%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI-------------------- 325
++ F SG+ + + G D Y NA
Sbjct: 618 DDYVFVGSGSTIVNAGDGYDVVDYSKGRTGALTIDGRNATKAGQYKVERDLSGTQVLQET 677
Query: 326 ------------------------IVYDANEHKQDFLSDVERLRFAD---------QCID 352
+ D L+ VE + ++
Sbjct: 678 VSKQETKRGKVTDLLEYRNYKLDYYYTNKGFKAHDELNSVEEIIGSNLRDKFYGSKFNDV 737
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY--LYLGSYDD 410
++ + L G D + + G D F Y YL +
Sbjct: 738 FHGHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKLYGGAGNDRLFGEYGNNYLDGGEG 797
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
++ G + R G + L+ + L + + + H
Sbjct: 798 DDHLEGGNGSDILR--GGSGNDKLFGNQGDDLLDGGEGDDQLAGGEGNDIYVYRKEYGH 854
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 53/197 (26%), Gaps = 15/197 (7%)
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
A + + G + + + S+GR + G + +R +
Sbjct: 613 NLGAKDDYVFVGSGSTIVNAGDGYDVVDYSKGRT---GALTIDGRNATKAGQYKVERDLS 669
Query: 423 ARHYITHGVK--EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ V E + LEY + L + + + R
Sbjct: 670 GTQVLQETVSKQETKRGKVTDLLEY--RNYKLDYYYTNKGFKAHDELNSVEEIIGSNLRD 727
Query: 481 ----VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
F+ + DDL +G D Y +G E L A ++ L
Sbjct: 728 KFYGSKFNDVFHGHDGDDLI--YGYDGDDRL--YGDNGNDEIHGGQGNDKLYGGAGNDRL 783
Query: 537 INAFADAPDLVQAGKDH 553
+ + G DH
Sbjct: 784 FGEYGNNYLDGGEGDDH 800
>gi|114570455|ref|YP_757135.1| putative outer membrane adhesin-like protein [Maricaulis maris
MCS10]
gi|114340917|gb|ABI66197.1| putative outer membrane adhesin like proteiin [Maricaulis maris
MCS10]
Length = 1963
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 48/148 (32%), Gaps = 6/148 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ GDD + G + ++ I G N ++
Sbjct: 96 SGNDVISGGRGRDFVLGGSGDDQI---SGGRGGDTLNGGDG-NDVIDGGAGNDRVSGDAG 151
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G +G D ++G +++ +G D G G DT Y ++ N V
Sbjct: 152 DDFLSGGAGRDTLLGGDGDDILSGGAGRDTIIGGQGHDTLVYGGSVRDAQVTGDSNQAEV 211
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVN 355
+D L VE ++F D +
Sbjct: 212 --RGADGRDTLEGVEAIQFDDGTVYLDG 237
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/241 (17%), Positives = 67/241 (27%), Gaps = 25/241 (10%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ D G DL G + ID I G + I+ +
Sbjct: 15 SAANAAAPANPGIDIDGSGRGDLLFGTGRDDIIDGR-GGNDLILGLGGDDVISGGGGHDF 73
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V+G +G+D + G++ N+ SGNDV G G D F S +I
Sbjct: 74 VLGGAGDDDISGDAGNDFLSGGSGNDVISGGRGRD--FVLGGSGDDQISGGRGGDT---- 127
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
L D + A + L G+D
Sbjct: 128 -------------LNGGDGNDVIDGGAGNDRVSGDAGDDFLSGGAGRDTLLGGDGDDILS 174
Query: 391 LSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
GRD D+ +Y GS D + S++ ++ Y
Sbjct: 175 GGAGRDTIIGGQGHDTLVYGGSVRDAQVTGDSNQAEVRGADGRDTLEGVEAIQFDDGTVY 234
Query: 446 I 446
+
Sbjct: 235 L 235
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/218 (12%), Positives = 51/218 (23%), Gaps = 27/218 (12%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ ++ + I + + G+ +D++ G N++ G+DV G G D
Sbjct: 13 RQSAANAAAPANPGIDIDGSGRGDLLFGTGRDDIIDGRGGNDLILGLGGDDVISGGGGHD 72
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
F + I + + + R +
Sbjct: 73 --FVLGGAGDDDISGDAGNDFLSGGS-----------------GNDVISGGRGRDFVLGG 113
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGA 421
+ + + G D G D D +L G+ D D
Sbjct: 114 SGDDQISGGRGGDTLNGGDGNDVIDGGAGNDRVSGDAGDDFLSGGAGRDTLLGGDGDDIL 173
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
G L Y S D
Sbjct: 174 ----SGGAGRDTIIGGQGHDTLVYGGSVRDAQVTGDSN 207
>gi|326387768|ref|ZP_08209374.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207814|gb|EGD58625.1| Hemolysin-type calcium-binding region:Peptidase M10A and M12B,
matrixin and adamalysin [Novosphingobium nitrogenifigens
DSM 19370]
Length = 229
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 61/187 (32%), Gaps = 25/187 (13%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDI-TELNPNAQEVARWALGEWSKVVDLTFEETSIH---- 76
+ + ++ + L + + + + A W+ V ++ F + +
Sbjct: 51 WLNGVGSKFISGYGSGENLRVNSPSSVTASDVTYIGQAFQAWAAVANVNFTQVTETNAGQ 110
Query: 77 -SDIKFISSN------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
DI+ + GY + + V T + LHEIG
Sbjct: 111 VGDIRIAFTGVIPSQYWGYTIVTSDGADNSNGDIWISNSVRSESFAPYTYNYNAILHEIG 170
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM-----MDASFGYCATPM 184
HALGL HP D+ ++MSY PQ++ TPM
Sbjct: 171 HALGLKHPFE--------APTIPSGYDNRRFTIMSYTDPQNAYWYDKSTGTYKYLIMTPM 222
Query: 185 VSDIVAV 191
V DI AV
Sbjct: 223 VYDIAAV 229
>gi|320104294|ref|YP_004179885.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC
43644]
gi|319751576|gb|ADV63336.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC
43644]
Length = 314
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 60/194 (30%), Gaps = 11/194 (5%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN+ +E IQ + D G G+D +DL GG+ E I G N
Sbjct: 73 GNDRVLVERNGAAGFAIQLVIDGGDGNDTIDLRRFGGIAAVAVGGGEGDDLIYGSSSNDN 132
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ +++ G +G+D + G N+ GND G G D F +
Sbjct: 133 LFGDDGEDTIYGGAGSDRIDGGDGNDRLLGGPGNDEIRGGLGND--FMSGDFGNDILMGA 190
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + Q L F D+ ++ + L G D +
Sbjct: 191 SGDDTIRGGPGNDQLLGEADNDLLFGDE--------GNDLIRGGDGNDTLNGGSGADTLD 242
Query: 382 SMKHFYEFGLSEGR 395
GR
Sbjct: 243 GGSGVNRIIPGPGR 256
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 51/183 (27%), Gaps = 14/183 (7%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I GG+D + + G I L I G + N TI G V
Sbjct: 68 ISAGGGNDRVLVERNGAAGFAIQL------VIDGGDGNDTIDLRR-----FGGIAAVAVG 116
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G +++ + SS ND G G DT + + +I + + + +
Sbjct: 117 GGEGDDLIYGSSSNDNLFGDDGEDTIY--GGAGSDRIDGGDGNDRLLGGPGNDEIRGGLG 174
Query: 342 ERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
D + + + L+ D+ + +G D
Sbjct: 175 NDFMSGDFGNDILMGASGDDTIRGGPGNDQLLGEADNDLLFGDEGNDLIRGGDGNDTLNG 234
Query: 401 SYL 403
Sbjct: 235 GSG 237
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/182 (12%), Positives = 35/182 (19%), Gaps = 6/182 (3%)
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
V DG G DT + + D L D
Sbjct: 92 VIDGGDGNDTIDLRRFGGIAAVAVGGGEGDDLIYGSSSNDNLFG------DDGEDTIYGG 145
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
++ + L+ G D G DI + N
Sbjct: 146 AGSDRIDGGDGNDRLLGGPGNDEIRGGLGNDFMSGDFGNDILMGASGDDTIRGGPGNDQL 205
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ G R D L + + L + G+
Sbjct: 206 LGEADNDLLFGDEGNDLIRGGDGNDTLNGGSGADTLDGGSGVNRIIPGPGRQKVIIPSGT 265
Query: 477 EG 478
G
Sbjct: 266 TG 267
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 42/186 (22%), Gaps = 10/186 (5%)
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNV 356
G D AI + D ++ RF +
Sbjct: 68 ISAGGGNDRVLVERNGAA------GFAIQLVIDGGDGNDT---IDLRRFGGIAAVAVGGG 118
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ ++ ++S ++L G+D +G D L N F
Sbjct: 119 EGDDLIYGSSSNDNLFGDDGEDTIYGGAGSDRIDGGDGNDRLLGGPGNDEIRGGLGNDFM 178
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
S G R L A ++ L + G D +
Sbjct: 179 SGDFGNDILMGASGDDTIRGGPGNDQLLGEADNDLLFGDEGNDLIRGGDGNDTLNGGSGA 238
Query: 477 EGRFVT 482
+
Sbjct: 239 DTLDGG 244
>gi|325203678|gb|ADY99131.1| Iron-regulated protein frpC [Neisseria meningitidis M01-240355]
Length = 1102
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/260 (16%), Positives = 84/260 (32%), Gaps = 15/260 (5%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 738 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGSSGSDTYVFGEGFGQDTVYNYDYATGR 797
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM------ 184
+ + + ++ + D S Y +
Sbjct: 798 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 857
Query: 185 VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
V D+ V+K+ + + G++ Y+ +Y + GDDLL+ G N
Sbjct: 858 VLDVATVKKL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDAGN 911
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ ++ G E N + + + + G GND + G N+ +GND +G
Sbjct: 912 DSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGG 971
Query: 302 SGLDTFFYYAPSYLYKIYRF 321
SG DT+ + +Y +
Sbjct: 972 SGSDTYVFGKGFGQDTVYNY 991
Score = 68.3 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 59/330 (17%), Positives = 103/330 (31%), Gaps = 60/330 (18%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G + N + GN N+ +GND +GSSG DT+ + +Y ++ A D
Sbjct: 743 GHNKNVSLYGNDGNDTLIGGAGNDYLEGSSGSDTYVFGEGFGQDTVYNYDYATGRKD--- 799
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+RF D + ++ + G +F G
Sbjct: 800 ----------IIRFTDGITADML-----TFTREGNHLLIKAKDGSGQVTVQSYFQNDGSG 844
Query: 393 EGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG--RNPDAFKALEYIAS 448
R +I FD+ G D+ V + + + + G N Y A
Sbjct: 845 AYRIDEIHFDN----GKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGAD 900
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+DL+N A + + + G + LY + +D+ N +
Sbjct: 901 GDDLLNGDAGNDSIYSGNGNDTLDGGEG-------NDALYGYNGNDVLNGGEGN------ 947
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
L ++ LI + +G D + FG G+ +N
Sbjct: 948 ----------------DHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV-FGKGFGQDTVYN 990
Query: 569 PDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
++ D + G AA H+I G
Sbjct: 991 --YHVDKNSDTMHFKG--FKAADVHFIRSG 1016
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 81/281 (28%), Gaps = 51/281 (18%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVF-DG-SSGLDTFF-------------YYAPSYL 315
+ G+ GND +IG + N+ SSG+D + G G DT + +
Sbjct: 750 LYGNDGNDTLIGGAGNDYLEGSSGSDTYVFGEGFGQDTVYNYDYATGRKDIIRFTDGITA 809
Query: 316 YKIYRFENAIIVYDANEHKQDFLS-------------DVERLRFADQCIDSV-------- 354
+ + + ++ ++ + F + + V
Sbjct: 810 DMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQ 869
Query: 355 -NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ L S L +G D G D +Y G+ +D +
Sbjct: 870 QSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLNGDAGND-----SIYSGNGNDTLD 924
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ Y +G + L ++ LI + G D + F
Sbjct: 925 GGEGNDAL----YGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV-F 979
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
G G+ ++ ++ D AA H+I G
Sbjct: 980 GKGFGQDTVYN--YHVDKNSDTM--HFKGFKAADVHFIRSG 1016
>gi|209525616|ref|ZP_03274154.1| Na-Ca exchanger/integrin-beta4 [Arthrospira maxima CS-328]
gi|209493949|gb|EDZ94266.1| Na-Ca exchanger/integrin-beta4 [Arthrospira maxima CS-328]
Length = 1474
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 45/165 (27%), Gaps = 10/165 (6%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + L T I G + T+ +++ GN+++ G ++ F GND
Sbjct: 7 GTPDPDLLLGTSEDDEIQGLAGDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFGGPGND 66
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G G D Y I + + + + +
Sbjct: 67 TLFGELGDD--VIYGGEGNNFILGNAGNDSIVGGSGNDT--------IYGGQGSDTLIGG 116
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ +L + L G + F + G +
Sbjct: 117 EGDDLLFGDRGNDILYTGSGFNTLTGGAGSDLFVIGVGFNGGQTD 161
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 70/208 (33%), Gaps = 19/208 (9%)
Query: 191 VQKIYGAPK--GSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVK 240
+Q + G G GN+ ++ G+D L D + GG
Sbjct: 23 IQGLAGDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFGGPGNDTLFGELGDDVIYGGEG 82
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N L SI G N TI ++++G G+D++ G+ N++ + SG + G
Sbjct: 83 NNFILGNAGNDSIVGGSGNDTIYGGQGSDTLIGGEGDDLLFGDRGNDILYTGSGFNTLTG 142
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+G D F V D ++ L F+D ++ +
Sbjct: 143 GAGSDLFVIGVGF-------NGGQTDVITDFRPGFDLIALANGLEFSD--LEIAQQGNDT 193
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYE 388
++ + E L+ + D +
Sbjct: 194 LIRDRQTRERLVLLEATDSTILNSGNFT 221
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 55/212 (25%), Gaps = 41/212 (19%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I + T + G ++ I ++++G GND + NN+ F G+D G
Sbjct: 4 IIIGTPDPDLLLGTSEDDEIQGLAGDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFGGP 63
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT F + + +
Sbjct: 64 GNDTLF-------------------------------------GELGDDVIYGGEGNNFI 86
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
A + ++ G D + EG D+ F D L G +
Sbjct: 87 LGNAGNDSIVGGSGNDTIYGGQGSDTLIGGEGDDLLFGDRG----NDILYTGSGFNTLTG 142
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
+ G N + DLI
Sbjct: 143 GAGSDLFVIGVGFNGGQTDVITDFRPGFDLIA 174
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 19/155 (12%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + G + L + ++ E N + + + G GND + G ++V +
Sbjct: 20 DDEIQGLAGDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFGGPGNDTLFGELGDDVIYG 79
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GN+ G++G D+ S IY + + + L F D+
Sbjct: 80 GEGNNFILGNAGNDSIV--GGSGNDTIYGGQGSDTLIGGEGDD---------LLFGDR-- 126
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
IL + + L G D+F F
Sbjct: 127 ------GNDILYTGSGFNTLTGGAGSDLFVIGVGF 155
Score = 44.8 bits (104), Expect = 0.042, Method: Composition-based stats.
Identities = 14/135 (10%), Positives = 26/135 (19%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
L + + + L + L G ++ + G D F
Sbjct: 13 LLLGTSEDDEIQGLAGDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFGGPGNDTLFGEL 72
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
Y N F G L + L +
Sbjct: 73 GDDVIYGGEGNNFILGNAGNDSIVGGSGNDTIYGGQGSDTLIGGEGDDLLFGDRGNDILY 132
Query: 463 VQVGKDHFSNFGCEE 477
G + + +
Sbjct: 133 TGSGFNTLTGGAGSD 147
Score = 38.6 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 15/142 (10%), Positives = 30/142 (21%)
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
V + + + ++ A + L+ G D + + +G D F
Sbjct: 2 VNIIIGTPDPDLLLGTSEDDEIQGLAGDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFG 61
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+ +L + G + + LI D
Sbjct: 62 GPGNDTLFGELGDDVIYGGEGNNFILGNAGNDSIVGGSGNDTIYGGQGSDTLIGGEGDDL 121
Query: 461 DLVQVGKDHFSNFGCEEGRFVT 482
G D
Sbjct: 122 LFGDRGNDILYTGSGFNTLTGG 143
>gi|297182166|gb|ADI18338.1| rtx toxins and related ca2+-binding proteins [uncultured
Rhodobacterales bacterium HF4000_03E16]
Length = 462
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/302 (14%), Positives = 84/302 (27%), Gaps = 8/302 (2%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + + TI GG D L D L GG + ++ G +
Sbjct: 87 TGTALGDYLRGTGAADTILGGGGSDTLRGGYGDDLLSGGAEADYLHGNRGADTLEGGAGD 146
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++ + + G G D + G S +++ + +G D +G SG DT + + Y
Sbjct: 147 DHLSGGGDDDMLSGGLGADALRGGSGSDLLYGGAGADTLNGGSGSDTL--DGGAGDDRFY 204
Query: 320 RFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A ++ H + + + + D + ++ A + + G D
Sbjct: 205 GGTGADVILGGAGHDTAYGGTGNDTIAGGDGNDRAYGGSGADLIGGDAGDDTIYAGGGND 264
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ G D Y + R G +
Sbjct: 265 TVLGGAGHDRISANGGHDSVDGGAGYDRLAGGAGHDTLVGGAGNDRLSGGSGHDFLTGDE 324
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
AL + + L A G D G + + G D +
Sbjct: 325 GRDALFGGSGDDVLFGGAAQDTLTGSSGHDRLDGGGDSDLLRGGSGADTLTGGAGDDLLI 384
Query: 499 FG 500
G
Sbjct: 385 GG 386
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 77/295 (26%), Gaps = 17/295 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
T+ G D LD GG + L + G N TI
Sbjct: 171 SGSDLLYGGAGADTLNGGSGSDTLDGGAGDDRFYGGTGADVILGGAGHDTAYGGTGNDTI 230
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A + G SG D++ G++ ++ + GND G +G D
Sbjct: 231 AGGDGNDRAYGGSGADLIGGDAGDDTIYAGGGNDTVLGGAGHDRISANGGHDSVD----G 286
Query: 323 NAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
A A D L +RL + R L + + L QD
Sbjct: 287 GAGYDRLAGGAGHDTLVGGAGNDRLSGGSGHDFLTGDEGRDALFGGSGDDVLFGGAAQDT 346
Query: 380 FESMKHFYEFGLSEGRDIT-----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
D+ D+ D L G D + V
Sbjct: 347 LTGSSGHDRLDGGGDSDLLRGGSGADTLTGGAGDDLLIGGQGDDVFVFLPGFGADTVAGH 406
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
D + + + AFA+ + + + + FDS L
Sbjct: 407 GTGDDLIDMTAVGVSDLSDLAFAETEAGLVITAPEGDSLLIDGATLANFDSDTIL 461
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/374 (13%), Positives = 96/374 (25%), Gaps = 21/374 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ AD G G + + LG
Sbjct: 106 GGGGSDTLRGGYGDDLLSGGAEADYLHGNRGADTLEGGAGDDHLSGGGDDDMLSGGLGAD 165
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+G +YG D+ S + + D +G ++ Y
Sbjct: 166 ALRGGSGSDLLYGGAGA---DTLNGGSGSDTLDGGAGDDRFYGGTGADVILGGAGHDTAY 222
Query: 196 G--APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G G + + I GDD + G N L I
Sbjct: 223 GGTGNDTIAGGD---GNDRAYGGSGADLIGGDAGDDTI----YAGGGNDTVLGGAGHDRI 275
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ ++ + + G +G+D ++G + N+ SG+D G G D F S
Sbjct: 276 SANGGHDSVDGGAGYDRLAGGAGHDTLVGGAGNDRLSGGSGHDFLTGDEGRDALF--GGS 333
Query: 314 YLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++ + ++ H + D D + LR +L + +
Sbjct: 334 GDDVLFGGAAQDTLTGSSGHDRLDGGGDSDLLRGGSGADTLTGGAGDDLLIGGQGDDVFV 393
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+ G H G D+ + + + DL +
Sbjct: 394 FLPGFGADTVAGH------GTGDDLIDMTAVGVSDLSDLAFAETEAGLVITAPEGDSLLI 447
Query: 433 EGRNPDAFKALEYI 446
+G F + +
Sbjct: 448 DGATLANFDSDTIL 461
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 37/282 (13%), Positives = 61/282 (21%), Gaps = 58/282 (20%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G++ D + G A + G+D G G D + ++ A +
Sbjct: 86 ITGTALGDYLRGTGAADTILGGGGSDTLRGGYGDD--LLSGGAEADYLHGNRGADTLEGG 143
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
L L + + L G D
Sbjct: 144 AGDDH--------LSGGGDDDMLSGGLGADALRGGSGSDLLYGGAGADTLNGGSGSDTLD 195
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G D Y G+ D+ A Y +
Sbjct: 196 GGAG-----DDRFYGGTGADVILGGAGHDTA-----------------------YGGTGN 227
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
D I G D+ G D + G DR +A
Sbjct: 228 DTIAGGDGNDRAYGGSGADLI------GGDAGDDTIYAGGGNDTVLGGAGHDRISAN--- 278
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+++ A ++ L + AG D
Sbjct: 279 -----------GGHDSVDGGAGYDRLAGGAGHDTLVGGAGND 309
>gi|254512564|ref|ZP_05124630.1| hemolysin-type calcium-binding region [Rhodobacteraceae bacterium
KLH11]
gi|221532563|gb|EEE35558.1| hemolysin-type calcium-binding region [Rhodobacteraceae bacterium
KLH11]
Length = 2828
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 77/545 (14%), Positives = 135/545 (24%), Gaps = 74/545 (13%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ G + D+ G G TI GL
Sbjct: 1411 SAGSGDDTLTGGGENDLLLGEDGNDDLSGGTGDDILSGGRGNDTIKGGTGSD--TAHYGL 1468
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS---FGYCATPMVSDIVA- 190
+ + N GV+ D ++ ++ D++ + D A
Sbjct: 1469 VEEDTENDLAGYSGVNADLSTNTATVTLTDGTTETDTLSGIENLIGTAGDDTLTGDGEAN 1528
Query: 191 -VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYID 244
+ + G + G+ + TI G D + G +D
Sbjct: 1529 VLTALNGNDTINAGS---GNDTIDGSGSGNNTIEGGTGTDTVSYQNHGELTNQRDGVALD 1585
Query: 245 LNTESWSSIG------------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
L + + G G E N + + ++ G GND++ G S ++
Sbjct: 1586 LESGTVQKGGYSDSLSGIENATGSENNDILRGDSAANTLDGYLGNDILAGGSGDDTLSGG 1645
Query: 293 SGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIV---------------YDA 330
GND G G DT + V
Sbjct: 1646 DGNDQLSGGFGNDTLDGGDDIDLVSYSLDEDTQDDGAGGLHVESVNVNLASGTATVSLSD 1705
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + D L ++E + + V + + L + L G DV +
Sbjct: 1706 DSTETDTLLNIEGVVGSTGADQIVGDENANTLIGKDGDDTLTGGDGNDVLSGGRGSDTLR 1765
Query: 391 LSEGRDI-----------------------TFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
EG D T D + +D + +
Sbjct: 1766 GGEGFDTVNYSLDIETADEGEPEPVNAESVTLDLATGSATVTLTDGSTETDTLSGIESVV 1825
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
G + + D + D I+ A + G + G + V++ +
Sbjct: 1826 GTGGADIISGDNQDNVIVGLDGADTISGGAGDDKISGAGAGSNTLDGGADTDTVSYLGQI 1885
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
G DL + EG D L A + L+
Sbjct: 1886 GGGVQVDLSAGQATKSAENVDTISNFENAEGTIFD--DTLTGDAGNNILLGNSGADTLYG 1943
Query: 548 QAGKD 552
AG D
Sbjct: 1944 GAGAD 1948
Score = 80.6 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 56/417 (13%), Positives = 103/417 (24%), Gaps = 36/417 (8%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ + DV G G TI + + L
Sbjct: 1260 TLYGDADNDIVLGGEGDDTLYGGENGDVLSGGFGDDTIDGGAGTDTLNYNLDSNTVDDGQ 1319
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
VD D S ++ D++ +
Sbjct: 1320 NEVHFDHVDVDLAAGSATVTLSDGDTDTDTLSAIENIFATA--------------GNDTV 1365
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G+ + + TI G D L GG + + T
Sbjct: 1366 AGD---GFANELRGLDGNDTISGRDGSDRL----FGGAGADTLAGDAGNDFVSAGSGDDT 1418
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY----------- 310
+ + ++G GND + G + +++ GND G +G DT Y
Sbjct: 1419 LTGGGENDLLLGEDGNDDLSGGTGDDILSGGRGNDTIKGGTGSDTAHYGLVEEDTENDLA 1478
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
S + A + + D LS +E L + ++L +
Sbjct: 1479 GYSGVNADLSTNTATVTLTDGTTETDTLSGIENLIGTAGDDTLTGDGEANVLTALNGNDT 1538
Query: 371 LIQVIGQDVFES-MKHFYEFGLSEGRDI-TFDSYLYLGSYDDLRNVFGSDRGAAARHY-- 426
+ G D + G D ++ ++ L + D + Y
Sbjct: 1539 INAGSGNDTIDGSGSGNNTIEGGTGTDTVSYQNHGELTNQRDGVALDLESGTVQKGGYSD 1598
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
G++ + L ++ L + G D S + F
Sbjct: 1599 SLSGIENATGSENNDILRGDSAANTLDGYLGNDILAGGSGDDTLSGGDGNDQLSGGF 1655
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/313 (14%), Positives = 75/313 (23%), Gaps = 23/313 (7%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL--- 315
N T+ + V+G G+D + G +V G+D DG +G DT Y S
Sbjct: 1258 NDTLYGDADNDIVLGGEGDDTLYGGENGDVLSGGFGDDTIDGGAGTDTLNYNLDSNTVDD 1317
Query: 316 ----------YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+A + + D LS +E + + L
Sbjct: 1318 GQNEVHFDHVDVDLAAGSATVTLSDGDTDTDTLSAIENIFATAGNDTVAGDGFANELRGL 1377
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRG 420
+ + G D G D D+ G D L G+D
Sbjct: 1378 DGNDTISGRDGSDRLFGGAGADTLAGDAGNDFVSAGSGDDTLTGGGENDLLLGEDGNDDL 1437
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ G + A + + + S
Sbjct: 1438 SGGTGDDILSGGRGNDTIKGGTGSDTAHYGLVEEDTENDLAGYSGVNADLSTNTATVTLT 1497
Query: 481 VTFDSYLYLGSYDDLRNVFGSDR----GAAARHYITHGVKEGRNPDAFKALEY-IASHED 535
L ++L G D G A +G ++ + +
Sbjct: 1498 DGTTETDTLSGIENLIGTAGDDTLTGDGEANVLTALNGNDTINAGSGNDTIDGSGSGNNT 1557
Query: 536 LINAFADAPDLVQ 548
+ Q
Sbjct: 1558 IEGGTGTDTVSYQ 1570
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/309 (12%), Positives = 83/309 (26%), Gaps = 28/309 (9%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T D DV G G T+ + ++L + PV
Sbjct: 1734 ANTLIGKDGDDTLTGGDGNDVLSGGRGSDTLRGGEGFDTVNYSLDIETADEGEP-EPVNA 1792
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ + +V ++ + +DI++ G G +
Sbjct: 1793 ESVTLDLATGSATVTLTDGSTETDTLSGIESVVGTGGADIISGDNQDNVIVGLDGADTIS 1852
Query: 209 I----EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--------------- 249
+ T+ D + G +DL+
Sbjct: 1853 GGAGDDKISGAGAGSNTLDGGADTDTVSYLGQIGGGVQVDLSAGQATKSAENVDTISNFE 1912
Query: 250 -------WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
++ G N + ++ +++ G +G D + G + + +GND G +
Sbjct: 1913 NAEGTIFDDTLTGDAGNNILLGNSGADTLYGGAGADTLEGGAGFDRLSGGAGNDTLHGDA 1972
Query: 303 GLDTFFYYAPSYLYKIYRFENAI-IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
GLD Y F+ + + D L+ +E + +
Sbjct: 1973 GLDRADYSETDVSQVTVDFDAGTATITRNGATEVDTLNSIEGAIGSAGADTFIAGATGLS 2032
Query: 362 LEYTASYED 370
L+ A +
Sbjct: 2033 LDGGAGADT 2041
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 69/579 (11%), Positives = 133/579 (22%), Gaps = 91/579 (15%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E G + + I D G + + H
Sbjct: 11 SEILHGGSEDETFLGLGGDDVIYGNGGNDILIGGGGDDNLNGAEGDDIFAGGDGIDVF-H 69
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G +Y+ + + + + + Y + D +
Sbjct: 70 GNGGQDIVNYSVDDGDSDGNGFHIDLASERTYYIYDQNTLWLEDYLHSIEGVFGSTRD-- 127
Query: 191 VQKIYGAPKGSL------GNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN- 241
+IYG+ ++ ++IY TI G+D ++ ++ +
Sbjct: 128 -DRIYGSEVSNILVGAAGQDSIYGRGGSDVLAGGSGADTIDGGSGNDTVNYSIDSDDADG 186
Query: 242 -------YIDLNTE----------------SWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
I+L S + G + N + +VG GND
Sbjct: 187 YGDGNGFDINLTAGVTRKFNDLSVQEDTLISIENAIGSDVNDRLTGTGDANVLVGRGGND 246
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV---------YD 329
+ G +V G+D DG SG+DT Y + Y + + D
Sbjct: 247 QIYGRDGADVLSGGIGSDTLDGGSGIDTVNYSLDAEDADGYGDGSGFDINLSEGITRRVD 306
Query: 330 ANEHKQDFLSDVE---------RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++D L +E RL D + + + L G D
Sbjct: 307 IYSVQEDTLISIENAVGSDVNDRLTGNDDANVLIGGGGDDYITGGDGADVLAGGSGADRI 366
Query: 381 ESMKHFYEF----------GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ G +G + + A ++
Sbjct: 367 DGGSGIDTVHYGLDAEDLDGYGDGTGFNINLSTGITHRLGDPGSHEDTLVAIENAIGSNA 426
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS----- 485
+ L +++ L+ G DH + D
Sbjct: 427 RDNITGTERSNLLLGGDANDTLVGGAGADILGGGNGLDHLYGGEGLDTVAYNLDPGDTDT 486
Query: 486 --------------------YLYLGSYDDLRNVFGSDRGAAARHYI--THGVKEGRNPDA 523
+ + +D + G+ I G
Sbjct: 487 GVSVDLAFAGTFGVTFWLDSNNVIQAQEDALFSIENVIGSDHSDIIKGDDGNNLLGGQAG 546
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
+ ++ LI G D + G
Sbjct: 547 NDTIYGRGGNDVLIGDQGIDTLDGGEGIDTVRYNVADGG 585
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/359 (13%), Positives = 89/359 (24%), Gaps = 39/359 (10%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ I G E + + +S+ G G+DV+ G S + SGND + S D
Sbjct: 123 GSTRDDRIYGSEVSNILVGAAGQDSIYGRGGSDVLAGGSGADTIDGGSGNDTVNYSIDSD 182
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV--------- 356
Y + I ++ ++D L +E +D
Sbjct: 183 DADGYGDGNGFDINLTAGVTRKFNDLSVQEDTLISIENAIGSDVNDRLTGTGDANVLVGR 242
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEF----------GLSEGRDITFDSYLYLG 406
+ + L IG D + G +G + +
Sbjct: 243 GGNDQIYGRDGADVLSGGIGSDTLDGGSGIDTVNYSLDAEDADGYGDGSGFDINLSEGIT 302
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
D+ +V + + D L + + G
Sbjct: 303 RRVDIYSVQEDTLISIENAVGSDVNDRLTGNDDANVLIGGGGDDYITGGDGADVLAGGSG 362
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDD--------------LRNVFGSDRGAAARHYIT 512
D + D+ L Y D GS
Sbjct: 363 ADRIDGGSGIDTVHYGLDAED-LDGYGDGTGFNINLSTGITHRLGDPGSHEDTLVAIENA 421
Query: 513 HGVKEGRNPDAFKALEYI---ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
G N + + +++ L+ G DH +G E ++ +N
Sbjct: 422 IGSNARDNITGTERSNLLLGGDANDTLVGGAGADILGGGNGLDH--LYGGEGLDTVAYN 478
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 43/360 (11%), Positives = 79/360 (21%), Gaps = 36/360 (10%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E +I S+ + + + AD+ G G + L + +
Sbjct: 419 ENAIGSNARDNITGTERSNLLLGGDANDTLVGGAGADILGGGNGLDHLYGGEGLDTVAYN 478
Query: 132 LGLMHPGSYNGGYPVYGVD--NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
L + + + DS + D
Sbjct: 479 LDPGDTDTGVSVDLAFAGTFGVTFWLDSNNVIQAQEDALFSIENVIGSDHSDIIKGDDGN 538
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL---TLIGGVKNYIDLN 246
+ G I T+ G D + +DL
Sbjct: 539 NLLGGQAGNDTIYGR---GGNDVLIGDQGIDTLDGGEGIDTVRYNVADGGFSGSIEVDLV 595
Query: 247 TE----------------------------SWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ I G + + + G GND
Sbjct: 596 EGISWYLDSDLNRVRVEDHLSNIENVTGSTASDKIYGDGTQNLLTGDWGDDDIKGRGGND 655
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G + G D+ S D Y S + I D +D L
Sbjct: 656 TLSGGGGQDTLDGGEGFDIVHYSQDADDRDGYGGSTGFDINLELGLTRRADDLSVHEDTL 715
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+E + + Q + ++L + L DV + + D+
Sbjct: 716 VGIEGVVGSAQDDVITGNDEANLLSGAGGDDTLEGGDNNDVLYGGQGNDTLHGQDDNDLL 775
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 63/196 (32%), Gaps = 8/196 (4%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG + I + G + I + + ++G G+D + G +++F G D
Sbjct: 7 GGGNSEILHGGSEDETFLGLGGDDVIYGNGGNDILIGGGGDDNLNGAEGDDIFAGGDGID 66
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRF----ENAIIVYDANEHK---QDFLSDVERLRFADQ 349
VF G+ G D Y F + Y +++ +D+L +E + + +
Sbjct: 67 VFHGNGGQDIVNYSVDDGDSDGNGFHIDLASERTYYIYDQNTLWLEDYLHSIEGVFGSTR 126
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSY 408
+ +IL A + + G DV G D +
Sbjct: 127 DDRIYGSEVSNILVGAAGQDSIYGRGGSDVLAGGSGADTIDGGSGNDTVNYSIDSDDADG 186
Query: 409 DDLRNVFGSDRGAAAR 424
N F + A
Sbjct: 187 YGDGNGFDINLTAGVT 202
Score = 42.5 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 30/72 (41%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N T+ + + G++G+D + G + ++ GND DG S LDT Y + +
Sbjct: 957 GGRDNDTLRGDDIGNILRGNAGDDHLEGRAGADILVGGEGNDTLDGGSSLDTVDYGSSAA 1016
Query: 315 LYKIYRFENAII 326
+
Sbjct: 1017 GVHVDLSAGEAT 1028
>gi|119483460|ref|ZP_01618874.1| hypothetical protein L8106_05386 [Lyngbya sp. PCC 8106]
gi|119458227|gb|EAW39349.1| hypothetical protein L8106_05386 [Lyngbya sp. PCC 8106]
Length = 1615
Score = 82.1 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 61/195 (31%), Gaps = 8/195 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+++ D L ++ GG +N + + G + N T+
Sbjct: 263 GNDFILGDAGDDSLFGDKDSDTLLGGVGADSMYGGRENDSLIGGTGDDVLFGDKGNDTVV 322
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+SV G NDV+ GNS ++ G+D G G D+ I+
Sbjct: 323 GGEGNDSVSGGDENDVLFGNSGTDLLDGGIGDDQLYGGQGDDSAI--GGDGNDIIFGDIG 380
Query: 324 AIIVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + Q + + L + IL + L IG D+
Sbjct: 381 NDTAFGGTGNDQVLGNQGDDVLSGDIGADAIFGGQGEDILNGGRGPDTLSGDIGNDLLIG 440
Query: 383 MKHFYEFGLSEGRDI 397
+ EGRDI
Sbjct: 441 GRGADVVTGGEGRDI 455
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 47/325 (14%), Positives = 86/325 (26%), Gaps = 30/325 (9%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S + I+ N G + D G ++ + +G
Sbjct: 232 SGDAGDDVINGNQG-NDGIQGGEGNDCLRGGQGNDFILGDAGDDSLFGDKDSDTLLGGVG 290
Query: 134 LMHPGSYNGGYPVYGVDNDY------ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ G D ND+ + + + D FG T ++
Sbjct: 291 ADSMYGGRENDSLIGGTGDDVLFGDKGNDTVVGGEGNDSVSGGDENDVLFGNSGTDLLDG 350
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ ++YG + I+ G+D GG N L
Sbjct: 351 GIGDDQLYGGQ----------GDDSAIGGDGNDIIFGDIGNDTA----FGGTGNDQVLGN 396
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + G I + + G G D + G+ N++ G DV G G D F
Sbjct: 397 QGDDVLSGDIGADAIFGGQGEDILNGGRGPDTLSGDIGNDLLIGGRGADVVTGGEGRDIF 456
Query: 308 ----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
I D + DF V+++ + + ++E
Sbjct: 457 SIGLVLNQSESGGSIIIGTTGGQTLDQADLITDFEQGVDQIGLTGGLV-----FEDLLIE 511
Query: 364 YTASYEDLIQVIGQDVFESMKHFYE 388
S LI + ++
Sbjct: 512 GRDSNTVLIDKNTGEFLAVLQGVSN 536
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/303 (12%), Positives = 74/303 (24%), Gaps = 46/303 (15%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E +I +++ G+D V G + +++ +G+DV +G+ G D
Sbjct: 197 GTEDGDSILGSEFNDNISALDGDDTVFGLAGDDILSGDAGDDVINGNQGND--------- 247
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
I E + + L + L+
Sbjct: 248 --GIQGGEGNDCLRGGQ-----------------GNDFILGDAGDDSLFGDKDSDTLLGG 288
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH---YITHGV 431
+G D + G D+ F D + G+D + +
Sbjct: 289 VGADSMYGGRENDSLIGGTGDDVLFGDKG----NDTVVGGEGNDSVSGGDENDVLFGNSG 344
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+ + Y +D + + + G + + L
Sbjct: 345 TDLLDGGIGDDQLYGGQGDDSAIGGDGNDIIFGDIGNDTAFGGTGNDQVLGNQGDDVL-- 402
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
S A + G L ++ LI G+
Sbjct: 403 ---------SGDIGADAIFGGQGEDILNGGRGPDTLSGDIGNDLLIGGRGADVVTGGEGR 453
Query: 552 DHF 554
D F
Sbjct: 454 DIF 456
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/237 (9%), Positives = 47/237 (19%), Gaps = 6/237 (2%)
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + + +F ++ L D + IL A + +
Sbjct: 188 FIFIQGAGVGTEDGDSILGSEFNDNISAL---DGDDTVFGLAGDDILSGDAGDDVINGNQ 244
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D + + +G D + D + A Y
Sbjct: 245 GNDGIQGGEGNDCLRGGQGNDFILGDAGDDSLFGDKDSDTLLGGVGADSMYGGRENDSLI 304
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
L ++ ++ + D + G D
Sbjct: 305 GGTGDDVLFGDKGNDTVVGGEGNDSVSGGDENDVLFGNSGTDLLDGGIGDDQLYGGQGDD 364
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G + G + + L G+D
Sbjct: 365 SAIGGDGNDII---FGDIGNDTAFGGTGNDQVLGNQGDDVLSGDIGADAIFGGQGED 418
Score = 47.1 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 45/127 (35%), Gaps = 7/127 (5%)
Query: 196 GAPKGSLGNNI--YKIEVQQKDSPFIQTIYDS-GGDDL----LDLTLIGGVKNYIDLNTE 248
G + + + Y + PF TI D GG D +++
Sbjct: 1372 GTNEVTTDGTLIEYIRLGTRGFGPFEYTISDGRGGIDTAQVGVNVDNFSSDNPQSFAGRN 1431
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G N T+ +++ G + ND ++G N+ G D G SG D F
Sbjct: 1432 LSDNLNGLGGNDTLVGLEGNDTLSGDNDNDSIVGGVGNDSITGGLGIDNLTGGSGTDLFR 1491
Query: 309 YYAPSYL 315
Y +P
Sbjct: 1492 YVSPEDG 1498
>gi|226946643|ref|YP_002801716.1| serine peptidase [Azotobacter vinelandii DJ]
gi|226721570|gb|ACO80741.1| serine peptidase [Azotobacter vinelandii DJ]
Length = 659
Score = 81.8 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/233 (20%), Positives = 78/233 (33%), Gaps = 23/233 (9%)
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
GT +A H G+ + D T F S
Sbjct: 449 YDGGTGDIASADGVFTHTFGVDGLHGESSRGTWTLQIRDALQGDSGTLHSVGFAGYGSAP 508
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL 233
+ Y T + + A+ G + D G+D +D
Sbjct: 509 GNADVYHYTEEILAVQALSGQSGRSTL---------------------VDDDAGNDWIDA 547
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+ + L S++GG +TIA T+IE+ +G GND + GN A+N+ +
Sbjct: 548 AAAIRDLS-LSLVAGQTSTLGGIP-FLTIAPGTLIENAIGGDGNDRIEGNEADNLIYGMR 605
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
G+D G +G DT + + Y + I V + + D L+ E F
Sbjct: 606 GDDTLIGGAGNDTAVFLGRAEDYSVSEAGGVITVQNLSGGGTDTLTGFEGWLF 658
>gi|15485202|emb|CAC67452.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 81.8 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 66/497 (13%), Positives = 123/497 (24%), Gaps = 73/497 (14%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S D+ + G TI + LGL +G D
Sbjct: 282 GSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGDDGNDIFLQDDETV 341
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + Y A +IVA + Y ++
Sbjct: 342 SDDI-----------DGGAGQDTVDYTALIHAGEIVAPHE-------------YGFGIEA 377
Query: 214 KDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
S G D D G + + +++ G + T+
Sbjct: 378 DLSEGWVRKAARRGMDYYDSVRSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGD 437
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G GND++ G++ N+ + G+D +G +G D F + V
Sbjct: 438 DLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVD 497
Query: 329 --------------------------------DANEHKQDFLSDVERLRFADQCIDSVNV 356
+A D +S +E + +
Sbjct: 498 YSQAGAHAGVATGRIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGD 557
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
Q ++L + L G DV + + GRD + + D N
Sbjct: 558 AQANVLRGAGGADVLAGGEGDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANA-- 615
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ + G + A + + + + + +
Sbjct: 616 -------GNLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRHI 668
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
E + + + D + G + L A ++DL
Sbjct: 669 ENAVGSVRDDVLI---GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDL 725
Query: 537 INAFADAPDLVQAGKDH 553
D L AG H
Sbjct: 726 FGGQGDDTYLFGAGYGH 742
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 93/374 (24%), Gaps = 38/374 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYN 141
+ T D D+ G G + + LG L +
Sbjct: 415 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGND 474
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++D + Y A+ +++D+ A + GS
Sbjct: 475 WFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLG-ILADLGAGRVDKLGEAGS 533
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + I G + + + G E +
Sbjct: 534 SAYDTVSGIENVVGTELADRI-------------TGDAQANVLRGAGGADVLAGGEGDDV 580
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------ 313
+ + + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 581 LLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAG 640
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ L +E + + + ++L A + L
Sbjct: 641 AKGVFLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSG 700
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G DV + G D DL G D Y + E
Sbjct: 701 GAGDDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGAGYGHDTIYE 747
Query: 434 GRNPDAFKALEYIA 447
+ A
Sbjct: 748 SGGGHDTIRINAGA 761
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/365 (11%), Positives = 72/365 (19%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGDDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYD---------------------------------ANEHKQDFL 338
+ I V D +
Sbjct: 339 ETVSDDIDGGAGQDTVDYTALIHAGEIVAPHEYGFGIEADLSEGWVRKAARRGMDYYDSV 398
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
VE + Q + + + L G D+
Sbjct: 399 RSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 458
Query: 390 GLSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 459 YGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLGILA 518
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 519 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 576
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G + L A + L D A G +
Sbjct: 577 ----------GDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGND 626
Query: 564 SITFN 568
++ F+
Sbjct: 627 TVDFS 631
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 28/183 (15%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV------KNYIDLNTESWSSIGGYE 257
+ + + + G+D +D + G ++ L S + E
Sbjct: 604 GDDWFFQDAANAGNLLD---GGDGNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPE 660
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + IE+ VGS +DV+IG++ NV +GNDV G +G D
Sbjct: 661 TSNVLRH---IENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGDD--VLLGDEGSDL 715
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ ++ +I E ++ + G
Sbjct: 716 LSGDAGNDDLFGGQGDDTYLF--------------GAGYGHDTIYESGGGHDTIRINAGA 761
Query: 378 DVF 380
D
Sbjct: 762 DQL 764
Score = 37.5 bits (85), Expect = 8.0, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 21/93 (22%)
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D L V+ + + L A + L G D +
Sbjct: 138 ELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGE 197
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
G D+ + D +
Sbjct: 198 GHNTVVGGAGDDVFLQDLGVWSNQLDGGAGVDT 230
>gi|254504135|ref|ZP_05116286.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
gi|222440206|gb|EEE46885.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
Length = 449
Score = 81.8 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ + + E W S G I + G++GND + G + N+ G+DV
Sbjct: 219 EDWDLVLIGAELWQSTFGTTNGDDI--------LQGTAGNDSLFGGNGNDQLTGGLGDDV 270
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAII---VYDANEHKQDFLSDVERLRFADQCIDSV 354
DG +G DT + Y ++ N I AN +DF ++ E ++F+ +D
Sbjct: 271 LDGGNGTDTVVFSGTREQYAVFAGSNGRIMVADTVANRDGRDFAANFETIQFSGATLDIT 330
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLR 412
++E + + Q+ ++ HF+ + E + T S++Y G+ D
Sbjct: 331 TA----LIEPSDTDNSAFQIYRFYNSDTGAHFFTSSVEERNAVIETLPSFVYEGNSYD-S 385
Query: 413 NVFGSDRGAAARHYITHG 430
NV D A R Y
Sbjct: 386 NVSADDGTAVYRFYNADT 403
>gi|218682662|ref|ZP_03530263.1| putative rhizobiocin/RTX toxin and hemolysin-type calcium binding
protein [Rhizobium etli CIAT 894]
Length = 630
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 59/551 (10%), Positives = 135/551 (24%), Gaps = 21/551 (3%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
+++L + D + + E + + AL ++ ++ E
Sbjct: 23 NALNNILSGGAGVDTLTGGAGDDTYVISIGDIVIENADEGTDTVQTALAAYTLGANV--E 80
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ F + NG + + D G G T+
Sbjct: 81 NLTYSGTAAFTGTGNGLDNILKGGVGADKLVGAGGNDTLIGGAGSDTMSGGTGDDI---- 136
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+ + + D+ T++ SY + + G + + + +A
Sbjct: 137 ------YVVDIATDLVIENASEGTDTVQTALASYTLGANVENLTYTGSASFTGIGNALAN 190
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW- 250
G +L N + + I D GD + + G +L + +
Sbjct: 191 TITGGVGNDTL-NGGAGADTLIGGAGNDTYIVDDAGDSVTEAAAAGTDTVRTNLASYTLA 249
Query: 251 ----SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + + + G + D + G N+ +G D G +G DT
Sbjct: 250 ANVENLTFAGTGAFAGTGNNLANVITGGAAIDTLSGGGGNDTLDGGAGADTLIGGAGDDT 309
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYT 365
+ + V A ++VE L ++ + + +
Sbjct: 310 YIVDNGGDSVAENTDAGSDTVRTALT-SYTLGANVENLSYSGTVAFTGTGNDLANTITGG 368
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL-YLGSYDDLRNVFGSDRGAAAR 424
A + L G D + + + D+ + + +
Sbjct: 369 AGNDLLDGGAGNDTLIGGVGNDTYIVDDVADVVTEGLNAGTDLIKTALSSYTLGNNVETL 428
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
Y G + ++ L + + G D + +
Sbjct: 429 QYTGSASFSGTGNALANKIIGGTGNDLLDGGAGNDTLVGGAGNDIYVVDSAGDVVTELVG 488
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
+ Y G + A ++ L
Sbjct: 489 DGTDEIRTALAAYSIAALANVENLTYTGSANFTGTGNALANTITGGAGNDTLNGGAGADT 548
Query: 545 DLVQAGKDHFS 555
+ G D +
Sbjct: 549 LIGGVGNDFYI 559
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 68/528 (12%), Positives = 122/528 (23%), Gaps = 41/528 (7%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ + + E + + AL ++ ++ E + F N T
Sbjct: 135 DIYVVDIATDLVIENASEGTDTVQTALASYTLGANV--ENLTYTGSASFTGIGNALANTI 192
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
AD G G T + +
Sbjct: 193 TGGVGNDTLNGGAGADTLIGGAGNDTYIV-------------------DDAGDSVTEAAA 233
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ SY + + G A + +A GA +L
Sbjct: 234 AGTDTVRTNLASYTLAANVENLTFAGTGAFAGTGNNLANVITGGAAIDTLSGG--GGNDT 291
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIG------GVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
T+ GDD + G + T S G T
Sbjct: 292 LDGGAGADTLIGGAGDDTYIVDNGGDSVAENTDAGSDTVRTALTSYTLGANVENLSYSGT 351
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V + G+ + + G + N++ +GND G G DT+
Sbjct: 352 VAFTGTGNDLANTITGGAGNDLLDGGAGNDTLIGGVGNDTYIVD-DVADVVTEGLNAGTD 410
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ ++VE L++ S A +I G D+ +
Sbjct: 411 LIKTALSSYTLGNNVETLQYTGSASFSGT--------GNALANKIIGGTGNDLLDGGAGN 462
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G DI +L + A Y + N + +
Sbjct: 463 DTLVGGAGNDIYVVDSAG-DVVTELVGDGTDEIRTALAAYSIAALANVENLTYTGSANFT 521
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ L N + ++ + ++ +
Sbjct: 522 GTGNALANTITGGAGNDTLNGGAGADTLIGGVGNDFYIVDNAGDIVTEVADEGTDTVRTT 581
Query: 507 ARHYITHGVKEGRN--PDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
Y E A A + L AG D
Sbjct: 582 LTSYTLGANIENLTNIGTAAFTGTGNALNNILSGGAGVDTQTGGAGDD 629
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/439 (13%), Positives = 112/439 (25%), Gaps = 27/439 (6%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + R L ++ ++ E + F + N
Sbjct: 217 DTYIVDDAGDSVTEAAAAGTDTVRTNLASYTLAANV--ENLTFAGTGAFAGTGNNLANVI 274
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D G G T++ + G + D
Sbjct: 275 TGGAAIDTLSGGGGNDTLDGGAGADTLIGGAGDD----------TYIVDNGGDSVAENTD 324
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+D+ T++ SY + + + G A + +A GA L
Sbjct: 325 AGSDTVRTALTSYTLGANVENLSYSGTVAFTGTGNDLANTITGGAGNDLLDGGA--GNDT 382
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
T DD+ D+ G + T S G + S
Sbjct: 383 LIGGVGNDTYI---VDDVADVVTEGLNAGTDLIKTALSSYTLGNNVETLQYTGSASFSGT 439
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-N 331
G++ + +IG + N++ +GND G +G D + + + + + A
Sbjct: 440 GNALANKIIGGTGNDLLDGGAGNDTLVGGAGNDIYVVDSAGDVVTELVGDGTDEIRTALA 499
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ L++VE L + + A + G D
Sbjct: 500 AYSIAALANVENLTYTGSANFTGT--------GNALANTITGGAGNDTLNGGAGADTLIG 551
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK-ALEYIASHE 450
G D + + R + + ++ N A +
Sbjct: 552 GVGNDFYIVDNAGDIVTEVADEGTDTVRTTLTSYTLGANIENLTNIGTAAFTGTGNALNN 611
Query: 451 DLINAFADAPDLVQVGKDH 469
L G D
Sbjct: 612 ILSGGAGVDTQTGGAGDDT 630
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 59/487 (12%), Positives = 126/487 (25%), Gaps = 15/487 (3%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
++ ++I+ +++ T ++ + D G G T + I +A
Sbjct: 2 TLGANIENLTNIGTAAFTGTGNALNNILSGGAGVDTLTGGAGDDTYVISIGDIVIENADE 61
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G + + S + D+++ G +
Sbjct: 62 GTDTVQTALAAYTLGANVENLTYSGTAAFTGTGNGLDNILKGGVGADKLVGAGGNDTLIG 121
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G+ S G V I+ + L N +L +S
Sbjct: 122 GAGSDTMSGGTGDDIYVVDIATDLVIENASEGTDTVQTALASYTLGANVENLTYTGSASF 181
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + + ++ G GND + G + + +GND + D+ A +
Sbjct: 182 TG-------IGNALANTITGGVGNDTLNGGAGADTLIGGAGNDTYIVDDAGDSVTEAAAA 234
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + + E+ + + L + L
Sbjct: 235 GTDTVRTNLASYTLAANVENLTFAGTGAFAGTGNNLANVITGGAAIDTLSGGGGNDTLDG 294
Query: 374 VIGQDVFESMKHFYEFGLSEGRD-ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D + + G D + ++ + + Y
Sbjct: 295 GAGADTLIGGAGDDTYIVDNGGDSVAENTDAGSDTVRTALTSYTLGANVENLSYSGTVAF 354
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS----NFGCEEGRFVTFDSYLY 488
G D + A ++ L + + VG D + EG D
Sbjct: 355 TGTGNDLANTITGGAGNDLLDGGAGNDTLIGGVGNDTYIVDDVADVVTEGLNAGTDLIKT 414
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGR---NPDAFKALEYIASHEDLINAFADAPD 545
S L N + + + + G L+ A ++ L+ +
Sbjct: 415 ALSSYTLGNNVETLQYTGSASFSGTGNALANKIIGGTGNDLLDGGAGNDTLVGGAGNDIY 474
Query: 546 LVQAGKD 552
+V + D
Sbjct: 475 VVDSAGD 481
>gi|291567578|dbj|BAI89850.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 1598
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 62/224 (27%), Gaps = 15/224 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T+ G D L GG + + + G N + T
Sbjct: 696 GNDSLFGDSGNDTLVGGSGADTL----SGGDGDDVVYGGSGPDLLYGGAGNDCLFGETGD 751
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++VG SG D + G N++ + SG D+ G G D+ F + ++ +
Sbjct: 752 DTLVGGSGADTLKGGGGNDLLYGGSGPDLLYGGQGDDSLF--GEAGDDTLFGDSGNDTLV 809
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ L I+ + L+ G D
Sbjct: 810 GGSGEDV--------LYGGLGNDLLYGGSGNDIIYGGQGDDFLLGDDGDDTLFGGAGNDT 861
Query: 389 FGLSEGRDI-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D+ + S + + DL F + G
Sbjct: 862 LFGGAGNDVFAYISRSQITTGTDLIVDFEAGSDRILFDREQFGF 905
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 44/161 (27%), Gaps = 19/161 (11%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D D TL GG N L ++ G + T+ + + SGN+++ G N+
Sbjct: 296 DQFDQTLDGGPGNDSILGGSGNDTLLGGPGDDTLFGQGGNDRLQAGSGNNLLYGGVGNDT 355
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
GND G G D + + + + D L +
Sbjct: 356 LLGGVGNDSLFGGLGDD------------LLQAGSGDNILDGGAGNDTLLGGI------- 396
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ L L G + +
Sbjct: 397 GNNSLFGGEGNDCLSGGGGNNWLEGGAGVNTLTAGTGNDTL 437
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 88/659 (13%), Positives = 165/659 (25%), Gaps = 106/659 (16%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRY-----FMEINFDKADVWRYGIGKG 117
S V ++T D+ ++ N TP + + + D I
Sbjct: 615 SSVSNIT------GGDVVLLNDNTIVRFTPTLPGGTQASFTYTASDGNTQDSANVFIDIL 668
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
+ N L +G P GG + D ND+ + + + D +
Sbjct: 669 PVTRINGLGGDDVLVGSSAPDLLYGGAGNDSLFGDSGNDTLVGGSGADTLSGGDGDDVVY 728
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-- 235
G ++ ++G + T+ GG+DLL
Sbjct: 729 GGSGPDLLYGGAGNDCLFGE----------TGDDTLVGGSGADTLKGGGGNDLLYGGSGP 778
Query: 236 ---IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN----- 287
GG + ++ G N T+ + + + G GND++ G S N+
Sbjct: 779 DLLYGGQGDDSLFGEAGDDTLFGDSGNDTLVGGSGEDVLYGGLGNDLLYGGSGNDIIYGG 838
Query: 288 -------------VFFESSGNDVFDGSSGLDT--------------FFYYAPSYLYKIYR 320
F +GND G +G D + +I
Sbjct: 839 QGDDFLLGDDGDDTLFGGAGNDTLFGGAGNDVFAYISRSQITTGTDLIVDFEAGSDRILF 898
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL--EYTASYEDLIQVIGQD 378
++ LS + + S + + + G
Sbjct: 899 DREQFGFIQIGTTPENSLSPQQFILVETGTYQDNLSLINSPILAYELQTGNLIYDPDGSG 958
Query: 379 VF-----ESMKHFYEFGLSE-------GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+++ +++ G D D + +D RNV
Sbjct: 959 TQPPEIIANLQGTPTLSVNDIILIGIAGDDTLPDIDDDDPTDEDPRNVTAFALINGTPGN 1018
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLI-NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
V + N F + D A + + G + G T
Sbjct: 1019 DAIAVSDTINAVDFVGVPVTIPASDNERPAVINTITDLIGGNVNILEGGTAAEFIPTLPG 1078
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN------PDAFKALEYIASHEDLINA 539
+ + G+ I + D +L ++ LI
Sbjct: 1079 GNIGSFSYEAIDSQGNLIRVPVNVNILTAIDGNLGDDTLIGSDGNDSLFGNLGNDCLIGG 1138
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSY-----DDLWNVFGSDRSAAA--- 591
D + G D F YL+ DL F
Sbjct: 1139 AGDDTLVGGEGSDTF----------------AYLSPNQINLGVDLIVDFTPGSDRLLFDR 1182
Query: 592 QHYITHGMKEGRALGISGMQF---KSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
+ + +S QF ++ + + L+++ + L D G
Sbjct: 1183 DQFRFTQIGTTPQNSLSPEQFIFLETGELNPDNLGTISSPILAYELETGTLIYDPDASG 1241
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 5/112 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + +Y G+D L + +L GG+ + + + + G N T+
Sbjct: 333 GGNDRLQAGSGNNLLYGGVGNDTLLGGVGNDSLFGGLGDDLLQAGSGDNILDGGAGNDTL 392
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
S+ G GND + G NN +G + +G DT Y +P+
Sbjct: 393 LGGIGNNSLFGGEGNDCLSGGGGNNWLEGGAGVNTLTAGTGNDTLVYLSPND 444
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 52/155 (33%), Gaps = 2/155 (1%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+G + S I T+ G+ D + + + +G
Sbjct: 1364 FGGQFTYTAQDSLGNTASALVSVSIATVDTIDGNAGDDFLAGHLGPIVLIGGPGNDTLLG 1423
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N + + +S+VG G++ +IG ++V GND G SG
Sbjct: 1424 SAFGNDLLLGNEGNDSLVGGPGDNTLIGGLGDDVLIGGPGNDTLVGGSGG--NTLTGLGG 1481
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
++ A++ DF+ + L+F D+
Sbjct: 1482 NNVFLYSSTNDVLLSASDLITDFVPGRDTLQFNDE 1516
Score = 44.8 bits (104), Expect = 0.054, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 47/194 (24%), Gaps = 19/194 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
I +I G +++ +I L + Y ++
Sbjct: 1325 NDSPVGGLTINSISGVSGG-QVNILPGNTSVEFIPLLPGPFGGQFTYTAQDSLGNTASAL 1383
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
V + D + GN+ ++ G V G G DT + + E +
Sbjct: 1384 VSVSIATVDTIDGNAGDDFLAGHLGPIVLIGGPGNDTL-LGSAFGNDLLLGNEGNDSLVG 1442
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ +L + L+ G + + F
Sbjct: 1443 GP-----------------GDNTLIGGLGDDVLIGGPGNDTLVGGSGGNTLTGLGGNNVF 1485
Query: 390 GLSEGRDITFDSYL 403
S D+ +
Sbjct: 1486 LYSSTNDVLLSASD 1499
>gi|288942625|ref|YP_003444865.1| Hemolysin-type calcium-binding region [Allochromatium vinosum DSM
180]
gi|288897997|gb|ADC63833.1| Hemolysin-type calcium-binding region [Allochromatium vinosum DSM
180]
Length = 1227
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 54/310 (17%), Positives = 90/310 (29%), Gaps = 18/310 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT--ESWSSIGGYEKNMTIAQHT 266
+ G D+ + G V + + N S+ + T+ +
Sbjct: 906 GNDILNGGKGSDRMIGGDGSDIYYVDNTGDVVSETNANASTGGIDSVYSSLTDYTLDPNV 965
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT--FFYYAPSYLYKIYRFENA 324
++ S+G + GN NN+ GN++ G +G DT + A + +
Sbjct: 966 ENGRIL-STGTANLTGNQLNNLLKAGIGNNILTGGTGTDTVSYVVGATTEKTGVTLNLAL 1024
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D L +E L + R+ L + L G D+
Sbjct: 1025 TTAQETGGSGTDTLVGIENLIGSAYADKLTGNSGRNNLSGGVGNDILNGGAGNDILNGDT 1084
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G D G+ D+ N + G + F
Sbjct: 1085 GNDTLNGGAGNDTL-----SGGAGKDILNGGAGNDILNGGT--------GIDIFRFDTAL 1131
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
AS+ D IN F+ A D +Q+ F T GS D + D
Sbjct: 1132 NAASNLDEINNFSVADDTIQLENAIFVKLKMPGTLSATNFRASIDGSAADNNDFILYDTD 1191
Query: 505 AAARHYITHG 514
+ A Y G
Sbjct: 1192 SGALFYDADG 1201
Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/371 (12%), Positives = 79/371 (21%), Gaps = 40/371 (10%)
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+Y I + D L+ + + + L A +
Sbjct: 842 STATYSITIDVTLVRDDLILKGTSGNDTLTGDMIDLGSY--DRLIGLAGNDSLFGLAGND 899
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G D+ K +G DI + + N + +
Sbjct: 900 TLEGGAGNDILNGGKGSDRMIGGDGSDIYYVDNTGDVVSETNANASTGGIDSVYSSLTDY 959
Query: 430 GVKEGRN-----PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-- 482
+ L + L + G D S
Sbjct: 960 TLDPNVENGRILSTGTANLTGNQLNNLLKAGIGNNILTGGTGTDTVSYVVGATTEKTGVT 1019
Query: 483 -----FDSYLYLGSYDDLRNVFGSDRGAAARHYIT--------------------HGVKE 517
+ GS D + G+A +T G
Sbjct: 1020 LNLALTTAQETGGSGTDTLVGIENLIGSAYADKLTGNSGRNNLSGGVGNDILNGGAGNDI 1079
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD 577
L A ++ L AG D G F+ L S
Sbjct: 1080 LNGDTGNDTLNGGAGNDTLSGGAGKDILNGGAGND--ILNGGTGIDIFRFDTALNAASNL 1137
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKV 637
D N F + +S F++ + S + + +D
Sbjct: 1138 DEINNFSVADDTIQLENAIFVKLKMP-GTLSATNFRAS---IDGSAADNNDFILYDTDSG 1193
Query: 638 DLYTDYFGDGN 648
L+ D G G
Sbjct: 1194 ALFYDADGSGT 1204
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 56/318 (17%), Positives = 96/318 (30%), Gaps = 29/318 (9%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
T D G G I + + ++ G
Sbjct: 214 DTGAGDDTIEAGGGNDEIDTGAGDDTIDAGNDGGNIEAGDGNDQVTVGRNGGTVADGGSG 273
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ----------- 192
+D + + + T +SD+ AV
Sbjct: 274 TDRLILDWSAARADGEYTWLGFSTYDTETATWQTFDYYTVHLSDLKAVLASADTLRLDLS 333
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD--------LLDLTLIGGVKNYID 244
YG N ++E+ + SG D D + + +
Sbjct: 334 YRYGYDSWLEFKNFEQLELTATAGDDLLVHRASGRYDGQAETDTLYADFSTTTEAVLWDN 393
Query: 245 LNTESWSSIGGYEKNMTI--------AQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ ++ + I + + VI++ +SGND + + ++ GND
Sbjct: 394 RDPSVAQTLLDGSTVVNIERMLLATGSGNDVIKNTHANSGNDEIDTGAGDDTIEAGGGND 453
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSV 354
G SG DT + A Y+I E + V D N D L DVERL+F DQ I+ +
Sbjct: 454 RIKGGSGTDTAVFSANFADYRIDTIEGGVSVSDLSGNGDGVDELYDVERLQFLDQTINLI 513
Query: 355 NVKQRSILEYTASYEDLI 372
N + ++ ED+
Sbjct: 514 NHAPTASNRTISTKEDVA 531
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 73/259 (28%), Gaps = 21/259 (8%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
T + + +D G G N + + +
Sbjct: 896 AGNDTLEGGAGNDILNGGKGSDRMIGGDGSDIYYVDNTGDVV------SETNANASTGGI 949
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL---- 202
V + + + +V + + + + + + I G ++
Sbjct: 950 DSVYSSLTDYTLDPNVENGRILSTGTANLTGNQLNNLLKAGIGNNILTGGTGTDTVSYVV 1009
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLL----------DLTLIGGVKNYIDLNTE-SWS 251
G K V + G D L + G +L+
Sbjct: 1010 GATTEKTGVTLNLALTTAQETGGSGTDTLVGIENLIGSAYADKLTGNSGRNNLSGGVGND 1069
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N + T +++ G +GND + G + ++ +GND+ +G +G+D F +
Sbjct: 1070 ILNGGAGNDILNGDTGNDTLNGGAGNDTLSGGAGKDILNGGAGNDILNGGTGIDIFRFDT 1129
Query: 312 PSYLYKIYRFENAIIVYDA 330
N V D
Sbjct: 1130 ALNAASNLDEINNFSVADD 1148
>gi|163737275|ref|ZP_02144693.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
gi|161389879|gb|EDQ14230.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
Length = 937
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 50/309 (16%), Positives = 94/309 (30%), Gaps = 13/309 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ Q T+ G+D L D +L+GGV N + T+ + ++ G + + T+
Sbjct: 323 GDDQLSTGIGNDTLLGGEGNDTLNNSAGDDSLVGGVGNDSIVATDGFDTLEGGDGDDTMY 382
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ ++G + ND++ G + N+ GNDV DG G DT +
Sbjct: 383 GGNDDDLLLGGADNDLMYGETGNDSLDGGDGNDVMDGGVGNDTL-MGGLGADTIAGGDGD 441
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
I + + L N L + ++ G D E
Sbjct: 442 DYIDGGDGDDSLTTGLGNDTLIGGAGNDTLRNSAGDDSLVGGTGDDSIVATDGNDTLEGG 501
Query: 384 KHFYEFGLSEGRDITF----DSYLYLGSYDD---LRNVFGSDRGAAARHYITHGVKEGRN 436
D+ D +Y + D + + FG+D + + N
Sbjct: 502 DGADTMYGGNDDDLLVGGAGDDKMYGEADADTFQMSDGFGNDTISGGEAGNDSDHIDMSN 561
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ ++ Y I AD ++ + ++ D
Sbjct: 562 VTSSVSVTYSGFEAGQITDGADTISFSEIEQLTLTDQADVVDASADNAGVNIDAGAGDDT 621
Query: 497 NVFGSDRGA 505
FG +
Sbjct: 622 ITFGEGDDS 630
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 62/416 (14%), Positives = 114/416 (27%), Gaps = 38/416 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + D G +++ I G
Sbjct: 310 SGGDGDDYIEGGEGDDQLSTGIGNDTLLGGEGNDTLNNSAGDDSLVGGVGNDSIVATDGF 369
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G +YG ++D + + Y + +D G +
Sbjct: 370 DTLEGGDGDDTMYGGNDDDLLLGGADNDLMYGETGNDSLDGGDGNDVMDGGVGNDTLMGG 429
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
GA + G + ++ G+D L GG N N+ S+
Sbjct: 430 LGADTIAGG----DGDDYIDGGDGDDSLTTGLGNDTLI----GGAGNDTLRNSAGDDSLV 481
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + +I +++ G G D + G + +++ +G+D G + DTF
Sbjct: 482 GGTGDDSIVATDGNDTLEGGDGADTMYGGNDDDLLVGGAGDDKMYGEADADTFQMSDGFG 541
Query: 315 LYKIYRFENAI---------------IVYDANEHKQDF-------LSDVERLRFADQCID 352
I E + Y E Q S++E+L DQ
Sbjct: 542 NDTISGGEAGNDSDHIDMSNVTSSVSVTYSGFEAGQITDGADTISFSEIEQLTLTDQADV 601
Query: 353 SVNVKQRSI--LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG------RDITFDSYLY 404
+ ++ A + + G D + L+EG D +
Sbjct: 602 VDASADNAGVNIDAGAGDDTITFGEGDDSITGGAGDDDLLLTEGGGVDTVSDFDLNDDDG 661
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
G Y+D +V G+ + G + AL E L+
Sbjct: 662 NGFYNDQLDVSDLAGGSGTGGAVRTGDVAVADDGFGNALLTFPGGEQLVLQGVTPA 717
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/280 (11%), Positives = 55/280 (19%), Gaps = 25/280 (8%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
I ++ GNDV G G D+ ++ I
Sbjct: 245 TTIIEQGDDTVMGGEGNDVVYGQGGNDSLLGEEGDDSLDGGDGDDVIEGGV--------- 295
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ L + + G D + EG D
Sbjct: 296 ----------GADTLMGGSGGDTLSGGDGDDYIEGGEGDDQLSTGIGNDTLLGGEGNDTL 345
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+S + N G + L A ++ + +
Sbjct: 346 NNSAGDDSLVGGVGNDSIVATDGFDTLEGGDGDDTMYGGNDDDLLLGGADNDLMYGETGN 405
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH----- 513
G D + + G D G +
Sbjct: 406 DSLDGGDGNDVMDGGVGNDTLMGGLGADTIAGGDGDDYIDGGDGDDSLTTGLGNDTLIGG 465
Query: 514 -GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G RN +L + ++ + G D
Sbjct: 466 AGNDTLRNSAGDDSLVGGTGDDSIVATDGNDTLEGGDGAD 505
>gi|15485200|emb|CAC67451.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 61/497 (12%), Positives = 117/497 (23%), Gaps = 73/497 (14%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S D+ + G TI + LGL +G D
Sbjct: 282 GSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 341
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + Y ++
Sbjct: 342 SDDIDGGAGLDTVDYSAMIHAGKIVAPHE------------------------YGFGIEA 377
Query: 214 KDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
S G D D G + + +++ G + T+
Sbjct: 378 DLSEGWVRKAARRGMDYYDSVRSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGD 437
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G GND++ G++ N+ + G+D +G +G D F + V
Sbjct: 438 DLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVD 497
Query: 329 --------------------------------DANEHKQDFLSDVERLRFADQCIDSVNV 356
+A D +S +E + +
Sbjct: 498 YSQAGAHAGVATGRIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGD 557
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
Q ++L + L G DV + GRD + + D N
Sbjct: 558 AQANVLRGAGGADVLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANA-- 615
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ + G + A + + + + + +
Sbjct: 616 -------GNLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRHI 668
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
E + + + D + G + L A ++DL
Sbjct: 669 ENAVGSVRDDVLI---GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDL 725
Query: 537 INAFADAPDLVQAGKDH 553
D L AG H
Sbjct: 726 FGGQGDDTYLFGAGYGH 742
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 93/374 (24%), Gaps = 38/374 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYN 141
+ T D D+ G G + + LG L +
Sbjct: 415 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGND 474
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++D + Y A+ +++D+ A + GS
Sbjct: 475 WFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLG-ILADLGAGRVDKLGEAGS 533
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + I G + + + G E +
Sbjct: 534 SAYDTVSGIENVVGTELADRI-------------TGDAQANVLRGAGGADVLAGGEGDDV 580
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------ 313
+ + + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 581 LLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAG 640
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ L +E + + + ++L A + L
Sbjct: 641 AKGVFLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSG 700
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G DV + G D DL G D Y + E
Sbjct: 701 GAGDDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGAGYGHDTIYE 747
Query: 434 GRNPDAFKALEYIA 447
+ A
Sbjct: 748 SGGGHDTIRINAGA 761
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/365 (11%), Positives = 73/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMDYYDSV 398
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
VE + Q + + + L G D+
Sbjct: 399 RSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 458
Query: 390 GLSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 459 YGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLGILA 518
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 519 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 576
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 577 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGND 626
Query: 564 SITFN 568
++ F+
Sbjct: 627 TVDFS 631
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 28/183 (15%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV------KNYIDLNTESWSSIGGYE 257
+ + + + G+D +D + G ++ L S + E
Sbjct: 604 GDDWFFQDAANAGNLLD---GGDGNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPE 660
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + IE+ VGS +DV+IG++ NV +GNDV G +G D
Sbjct: 661 TSNVLRH---IENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGDD--VLLGDEGSDL 715
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ ++ +I E ++ + G
Sbjct: 716 LSGDAGNDDLFGGQGDDTYLF--------------GAGYGHDTIYESGGGHDTIRINAGA 761
Query: 378 DVF 380
D
Sbjct: 762 DQL 764
Score = 37.5 bits (85), Expect = 7.8, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 21/93 (22%)
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D L V+ + + L A + L G D +
Sbjct: 138 ELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGE 197
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
G D+ + D +
Sbjct: 198 GHNTVVGGAGDDVFLQDLGVWSNQLDGGAGVDT 230
>gi|89069993|ref|ZP_01157325.1| type I secretion target repeat protein [Oceanicola granulosus
HTCC2516]
gi|89044441|gb|EAR50572.1| type I secretion target repeat protein [Oceanicola granulosus
HTCC2516]
Length = 977
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 54/214 (25%), Gaps = 13/214 (6%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G G+D + G ++ G+D G G D Y
Sbjct: 532 HGDGQDRLFGGEGDDTIYGEGNDDYIDGGVGDDEMYGGEGDDRII--GGDGDDIAYGGAG 589
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
I+ D + D + E D + A + + G D+
Sbjct: 590 NDILDDVEGSQYDNADNDEYY-GGDGDDEVYTGFGDDTAYGDAGNDTVSGERGNDLVYGG 648
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
E G D +LY G DD D Y G R+ +
Sbjct: 649 DGDDEVRGGSG-----DDFLYGGDGDDTL----IDGNDEDETYGGDGNDVFRDGRGAD-I 698
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
Y D I +V G +
Sbjct: 699 HYGGLGSDTIFGGTTDDHVVGGEDPDLDGDGESD 732
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 5/168 (2%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLD---LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + Y G+D+LD + N + + + T
Sbjct: 571 GDDRIIGGDGDDIAYGGAGNDILDDVEGSQYDNADNDEYYGGDGDDEVYTGFGDDTAYGD 630
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++V G GND+V G ++ SG+D G G DT + + Y +
Sbjct: 631 AGNDTVSGERGNDLVYGGDGDDEVRGGSGDDFLYGGDGDDTLI--DGNDEDETYGGDGND 688
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ D + F D V + L+ +++
Sbjct: 689 VFRDGRGADIHYGGLGSDTIFGGTTDDHVVGGEDPDLDGDGESDEIDT 736
Score = 40.9 bits (94), Expect = 0.64, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 8/98 (8%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQH--TVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ IDL + N + + VV +G+D+V + + +G
Sbjct: 249 TAGDDVIDLAYTGDPEGDRIDNNDALIPGHDPNDDLVVAGAGDDLVKSEKGGDTVYAGAG 308
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+D G G D + ++ V ++ E
Sbjct: 309 DDTVFGGEGDDLIY------GDTDLGTDDGGTVRESFE 340
>gi|149203391|ref|ZP_01880361.1| RTX toxin and related Ca2+-binding protein-like protein
[Roseovarius sp. TM1035]
gi|149143224|gb|EDM31263.1| RTX toxin and related Ca2+-binding protein-like protein
[Roseovarius sp. TM1035]
Length = 1327
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 69/472 (14%), Positives = 130/472 (27%), Gaps = 33/472 (6%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI--GHALGLMHPGSYNGGY 144
G D+ + D D G G T+ + + E+ G ++H + N
Sbjct: 386 GGNDVIYGDAGHDEIYGGDGEDKIFGGTGDDTVKAGDGDDEVRGGADDDILHGDAGNDHL 445
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ + +VM+ ++ + D A+ G + G
Sbjct: 446 DGGRGKDQILGGTGDDTVMAGAGDDEAWGEDGDDLIHGDAGDD--ALDGGLGDDQIFGG- 502
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + GDDL+ G + + I G + T+
Sbjct: 503 ---TGDDTVVAGADDDAAWGEDGDDLI----HGNAGDDVLDGGLGDDQILGGTGDDTVVA 555
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ G G+D++ G++ ++V G+D G +G DT A ++
Sbjct: 556 GAGDDEAWGEDGDDLIHGDAGDDVLEGGVGDDQIFGGTGDDTVVAGAGDDEAWGEDGDDL 615
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
I DA + D + + + V + + G DV ++
Sbjct: 616 IHG-DAGDDVLDGGAGDDEILGGIGDDTVVAGAGDDEAWGEDGDDLIHGDAGDDVLDAGL 674
Query: 385 HFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
E G D D + DDL + D G +
Sbjct: 675 GDDEILGGIGDDTVVAGAGDDEAWGEDGDDLIHGDAGDDALD----GGAGDDQILGGTGD 730
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
+ A +D+ D G D ++ F + D
Sbjct: 731 DTVVAGAGDDDVQGEDGDDLIHGDAGDDVLDGGAGDDQIFGGTGDDTVVAGAGDDEA--- 787
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G AL+ A + ++ D + AG+D
Sbjct: 788 ---------WGEDGDDLIHGNAGDDALDGGAGDDQILGGTGDDTVVAGAGED 830
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/463 (12%), Positives = 114/463 (24%), Gaps = 21/463 (4%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
D+ + D G G T+++ E G G + G
Sbjct: 569 DLIHGDAGDDVLEGGVGDDQIFGGTGDDTVVAGAGDDEAWGEDGDDLIHGDAGDDVLDGG 628
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
D E + D G + + G + G
Sbjct: 629 AGDDEILGGIGDDTVVAGAGDDEAWGEDGDDLIHGDAGDDVLDAGLGDDEILGG----IG 684
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + GDDL+ G + I G + T+ +
Sbjct: 685 DDTVVAGAGDDEAWGEDGDDLI----HGDAGDDALDGGAGDDQILGGTGDDTVVAGAGDD 740
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
V G G+D++ G++ ++V +G+D G +G DT A + + + + +++
Sbjct: 741 DVQGEDGDDLIHGDAGDDVLDGGAGDDQIFGGTGDDTVV--AGAGDDEAWGEDGDDLIHG 798
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
L + + A ++ G D+
Sbjct: 799 NAGDD--------ALDGGAGDDQILGGTGDDTVVAGAGEDEAWGEDGDDLIHGNAGDDAL 850
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G D F + + G +
Sbjct: 851 DGGLGDDQIFGGTGDDTVVAGAGDDQAWGEDGDDLIHGDAGDDALDGGLGDDQIFGGTGD 910
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ ++ D + G D ++ G D V G+ A
Sbjct: 911 DTVVAGAGDDQAWGEDGDDLIHGDAGDDALDGGLGDDQIFGGTGDDTVVAGAGDDEA--- 967
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G L+ A + ++ D + AG D
Sbjct: 968 WGEDGDDLIHGNAGDDVLDGGAGDDQILGGTGDDTVVAGAGDD 1010
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 52/380 (13%), Positives = 94/380 (24%), Gaps = 18/380 (4%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
++ D G G T+++ E G G + G
Sbjct: 794 DLIHGNAGDDALDGGAGDDQILGGTGDDTVVAGAGEDEAWGEDGDDLIHGNAGDDALDGG 853
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
D + D G + A+ G + G
Sbjct: 854 LGDDQIFGGTGDDTVVAGAGDDQAWGEDGDDLIHGDAGDDALDGGLGDDQIFGG----TG 909
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + GDDL+ G + I G + T+ +
Sbjct: 910 DDTVVAGAGDDQAWGEDGDDLI----HGDAGDDALDGGLGDDQIFGGTGDDTVVAGAGDD 965
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
G G+D++ GN+ ++V +G+D G +G DT A + + + +++
Sbjct: 966 EAWGEDGDDLIHGNAGDDVLDGGAGDDQILGGTGDDTVV--AGAGDDDVQGEDGDDLIHG 1023
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
L + + L + L G DV S +
Sbjct: 1024 NAGDDV--------LDGGVGDDEILGGTGDDALSGGTGDDQLAGDSGDDVIFSDEGDDIS 1075
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G D+ F + S Y G + A
Sbjct: 1076 HGGAGNDVLFGGDGDDLLDGGDDDDIVSGDAGQDSLYGGDGNDILSGGADEDTVLGGAGD 1135
Query: 450 EDLINAFADAPDLVQVGKDH 469
+ ++ A D H
Sbjct: 1136 DIVVADDDSASDTYSGDAGH 1155
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/330 (13%), Positives = 94/330 (28%), Gaps = 31/330 (9%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-- 307
++ G+ I +++ G G+D + GN +++ G+D G +G D
Sbjct: 325 DDNLAGFGGRDRIYGGAGDDNISGGDGDDSLFGNDGDDLIAGGDGDDWISGGAGDDRLFG 384
Query: 308 -----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRSI 361
Y + +IY + ++ + +R
Sbjct: 385 EGGNDVIYGDAGHDEIYGGDGEDKIFGGTGDDTVKAGDGDDEVRGGADDDILHGDAGNDH 444
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-------------FDSYLYLGSY 408
L+ + ++ G D + E +G D+ D ++ G+
Sbjct: 445 LDGGRGKDQILGGTGDDTVMAGAGDDEAWGEDGDDLIHGDAGDDALDGGLGDDQIFGGTG 504
Query: 409 DDLRNVFGSD----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
DD D + + + + +D + A A +
Sbjct: 505 DDTVVAGADDDAAWGEDGDDLIHGNAGDDVLDGGLGDDQILGGTGDDTVVAGAGDDEAWG 564
Query: 465 VGKDHFS--NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
D + G + D ++ G+ DD D A + G
Sbjct: 565 EDGDDLIHGDAGDDVLEGGVGDDQIFGGTGDDTVVAGAGDDEA----WGEDGDDLIHGDA 620
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKD 552
L+ A ++++ D + AG D
Sbjct: 621 GDDVLDGGAGDDEILGGIGDDTVVAGAGDD 650
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/429 (12%), Positives = 102/429 (23%), Gaps = 13/429 (3%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ + D G I + + LG
Sbjct: 804 ALDGGAGDDQILGGTGDDTVVAGAGEDEAWGEDGDDLIHGNAGDDALDGGLGDDQIFGGT 863
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G V D + + + D +D G + V G +
Sbjct: 864 GDDTVVAGAGDDQAWGEDGDDLIHGDAGDDALDGGLGDDQIFGGTGDDTVVAGAGDDQAW 923
Query: 202 LGNNIY-----KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWS 251
+ + I+ GDD + D G + +
Sbjct: 924 GEDGDDLIHGDAGDDALDGGLGDDQIFGGTGDDTVVAGAGDDEAWGEDGDDLIHGNAGDD 983
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + I T ++VV +G+D V G +++ ++G+DV DG G D
Sbjct: 984 VLDGGAGDDQILGGTGDDTVVAGAGDDDVQGEDGDDLIHGNAGDDVLDGGVGDDEIL--G 1041
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + + F + + + D + L +D+
Sbjct: 1042 GTGDDALSGGTGDDQLAGDSGDDVIFSDEGDDISHGGAGNDVLFGGDGDDLLDGGDDDDI 1101
Query: 372 IQV-IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ GQD D D + + G A + +
Sbjct: 1102 VSGDAGQDSLYGGDGNDILSGGADEDTVLGGAGDDIVVADDDSASDTYSGDAGHDQLNYS 1161
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+ + G DHF + S LY
Sbjct: 1162 GATDGVELDLITGMASGESIGDDSFSGFEDYVGSTGDDHFRAGSGQASLTGNGGSDLYNF 1221
Query: 491 SYDDLRNVF 499
D ++
Sbjct: 1222 VQGDTVDII 1230
>gi|149203012|ref|ZP_01879983.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
gi|149143558|gb|EDM31594.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
Length = 983
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/329 (14%), Positives = 92/329 (27%), Gaps = 27/329 (8%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
S +++ D D W+ + S L +I LG G V E
Sbjct: 618 SGTAQQLDGDIIDNWQDDDLLEILGSVFGLDDIVVTLGSAILDVDTDGDGVADTTITLEG 677
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
D + ++ + ++ +V+ + + G
Sbjct: 678 DFSNATFNVENSGGNTTISSTGAQPEFNIVNGTAGSEFLPGTLDN--------------- 722
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+I G+D + + N I +IGG N TI + +
Sbjct: 723 ----DSITGGDGNDSIPAS----DGNDIVFGGLGNDNIGGGLGNDTIDGGEGDDIIGAGF 774
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D V G + N+V +G+D +G G D+ I E A +
Sbjct: 775 GDDSVTGGAGNDVVAGGAGDDTLEGGDGNDSM--SGSFGNDLIDGGEGADDIGGGTGRDT 832
Query: 336 -DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D + + + + + + L + + G D + G
Sbjct: 833 IDAGAGNDSVGGGEGDDSILGGEGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVITGGTG 892
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
D F + D+ F +
Sbjct: 893 AD-QFVFSAFFDGEADVITDFEDGLDSFF 920
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/254 (17%), Positives = 74/254 (29%), Gaps = 34/254 (13%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--------WSSIGG 255
+ +E ++ F + +SGG+ + T N ++ S SI G
Sbjct: 670 DTTITLEGDFSNATFN--VENSGGNTTISSTGAQPEFNIVNGTAGSEFLPGTLDNDSITG 727
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N +I + V G GND + G N+ G+D+ G D+
Sbjct: 728 GDGNDSIPASDGNDIVFGGLGNDNIGGGLGNDTIDGGEGDDIIGAGFGDDSV-------- 779
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
A A D L D +++ +D+
Sbjct: 780 -----TGGAGNDVVAGGAGDDTLEG------GDGNDSMSGSFGNDLIDGGEGADDIGGGT 828
Query: 376 GQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G+D ++ G EG D D G D + G+D A
Sbjct: 829 GRDTIDAGAGNDSVGGGEGDDSILGGEGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVIT 888
Query: 431 VKEGRNPDAFKALE 444
G + F A
Sbjct: 889 GGTGADQFVFSAFF 902
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 41/359 (11%), Positives = 86/359 (23%), Gaps = 33/359 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+Q + + + G D G I L + G ++ +I
Sbjct: 574 GNMQASNFNSSGSFVNVPGSTGSDQINATGAPELIMLGGGEDTVSGTAQQLD----GDII 629
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFD----GSSGLDTFFYYAPSYLYKIYRFENA 324
++ +++ + + G+ + D G DT + + EN+
Sbjct: 630 DNWQDDDLLEILGSVFGLDDIVVTLGSAILDVDTDGDGVADTTITLEGDFSNATFNVENS 689
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ ++ + + + + G D+
Sbjct: 690 GGNTTISSTGAQPEFNI--VNGTAGSEFLPGTLDNDSITGGDGNDSIPASDGNDIVFGGL 747
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLR-NVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G G D G DD+ FG D G L
Sbjct: 748 GNDNIGGGLGNDTI-----DGGEGDDIIGAGFGDDSVT-----GGAGNDVVAGGAGDDTL 797
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
E ++ + +F + G D + + G D + G
Sbjct: 798 EGGDGNDSMSGSFGNDLIDGGEGADDIGGGTGRDTIDAGAGNDSVGGGEGDDSILGGEGN 857
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
A ++ A ++ + + G D F + +G
Sbjct: 858 DFLA------------GGGRNDTIDGGAGNDTINAGAGNDVITGGTGADQFVFSAFFDG 904
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
N + + +I G + + I ++++G GND + GN N++ G
Sbjct: 166 PATNGNDTLIGFGTDDAISGLDGDDFINGQEGQDTLLGDGGNDSLFGNDGNDLLNGGLGA 225
Query: 296 DVFDGSSGLDTF 307
D+ DG GLD
Sbjct: 226 DILDGGFGLDVI 237
>gi|239787166|emb|CAQ64443.1| adenylate cyclase-hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 81.8 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 61/497 (12%), Positives = 117/497 (23%), Gaps = 73/497 (14%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S D+ + G TI + LGL +G D
Sbjct: 282 GSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 341
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + Y ++
Sbjct: 342 SDDIDGGAGLDTVDYSAMIHAGKIVAPHE------------------------YGFGIEA 377
Query: 214 KDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
S G D D G + + +++ G + T+
Sbjct: 378 DLSEGWVRKAARRGMDYYDSVRSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGD 437
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G GND++ G++ N+ + G+D +G +G D F + V
Sbjct: 438 DLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVD 497
Query: 329 --------------------------------DANEHKQDFLSDVERLRFADQCIDSVNV 356
+A D +S +E + +
Sbjct: 498 YSQAGAHAGVATGRIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGD 557
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
Q ++L + L G DV + GRD + + D N
Sbjct: 558 AQANVLRGAGGADVLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANA-- 615
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ + G + A + + + + + +
Sbjct: 616 -------GNLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRHI 668
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
E + + + D + G + L A ++DL
Sbjct: 669 ENAVGSVRDDVLI---GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDL 725
Query: 537 INAFADAPDLVQAGKDH 553
D L AG H
Sbjct: 726 FGGQGDDTYLFGAGYGH 742
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 93/374 (24%), Gaps = 38/374 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYN 141
+ T D D+ G G + + LG L +
Sbjct: 415 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGND 474
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++D + Y A+ +++D+ A + GS
Sbjct: 475 WFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLG-ILADLGAGRVDKLGEAGS 533
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + I G + + + G E +
Sbjct: 534 SAYDTVSGIENVVGTELADRI-------------TGDAQANVLRGAGGADVLAGGEGDDV 580
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------ 313
+ + + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 581 LLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAG 640
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ L +E + + + ++L A + L
Sbjct: 641 AKGVFLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSG 700
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G DV + G D DL G D Y + E
Sbjct: 701 GAGDDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGAGYGHDTIYE 747
Query: 434 GRNPDAFKALEYIA 447
+ A
Sbjct: 748 SGGGHDTIRINAGA 761
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/365 (11%), Positives = 73/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMDYYDSV 398
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
VE + Q + + + L G D+
Sbjct: 399 RSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 458
Query: 390 GLSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 459 YGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLGILA 518
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 519 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 576
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 577 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGND 626
Query: 564 SITFN 568
++ F+
Sbjct: 627 TVDFS 631
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 28/183 (15%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV------KNYIDLNTESWSSIGGYE 257
+ + + + G+D +D + G ++ L S + E
Sbjct: 604 GDDWFFQDAANAGNLLD---GGDGNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPE 660
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + IE+ VGS +DV+IG++ NV +GNDV G +G D
Sbjct: 661 TSNVLRH---IENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGDD--VLLGDEGSDL 715
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ ++ +I E ++ + G
Sbjct: 716 LSGDAGNDDLFGGQGDDTYLF--------------GAGYGHDTIYESGGGHDTIRINAGA 761
Query: 378 DVF 380
D
Sbjct: 762 DQL 764
Score = 37.5 bits (85), Expect = 8.1, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 21/93 (22%)
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D L V+ + + L A + L G D +
Sbjct: 138 ELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGE 197
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
G D+ + D +
Sbjct: 198 GHNTVVGGAGDDVFLQDLGVWSNQLDGGAGVDT 230
>gi|237808027|ref|YP_002892467.1| Hemolysin-type calcium-binding region [Tolumonas auensis DSM 9187]
gi|237500288|gb|ACQ92881.1| Hemolysin-type calcium-binding region [Tolumonas auensis DSM 9187]
Length = 1461
Score = 81.4 bits (199), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 73/213 (34%), Gaps = 17/213 (7%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG+D++ G + L + I G N + +++VG G D + G+
Sbjct: 1209 GGNDIV----YGTTGHDTLLGGDGNDFISGRAGNDMLYGGAGNDTLVGGYGIDKLYGDDG 1264
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N++ ND+ DG SG+DT Y + + N D S++E +
Sbjct: 1265 NDILLGGPSNDILDGGSGIDTAMYSDATSGVTV----NLSTGTATGGDGTDIFSNIENVT 1320
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR---------D 396
++ ++L+ + L +G D+ F + D
Sbjct: 1321 GSNFGDTLTGNDSVNVLDGGIGADTLTGGLGNDILTGGDGADIFKWTSADITSSGAPFTD 1380
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
D + G DL +V + Y++
Sbjct: 1381 TITDFSMAQGDLLDLTDVLTGEPVNDLSSYLSF 1413
>gi|15485198|emb|CAC67450.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 81.4 bits (199), Expect = 4e-13, Method: Composition-based stats.
Identities = 60/492 (12%), Positives = 121/492 (24%), Gaps = 63/492 (12%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S D+ + G TI + LGL +G D
Sbjct: 282 GSSLNDSIAGDDRDNELWGDDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 341
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + +LG + Y
Sbjct: 342 SDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSREWVRKASALGVDYYDSVRNV 401
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
++ IG + + +++ G + T+ + + G
Sbjct: 402 ENV-------------------IGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFG 442
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----- 328
GND++ G++ N+ + G+D +G +G D F + V
Sbjct: 443 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAG 502
Query: 329 ---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+A D +S +E + + Q ++
Sbjct: 503 AHAGVATGRIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANV 562
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L + L G DV + GRD + + D N
Sbjct: 563 LRGAGGADVLAGGEGDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANA------- 615
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ + G + A + + + + + + E
Sbjct: 616 --GNLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRHIENAVG 673
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
+ + + D + G + L A ++DL
Sbjct: 674 SVRDDVLI---GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQG 730
Query: 542 DAPDLVQAGKDH 553
D L AG H
Sbjct: 731 DDTYLFGAGYGH 742
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 93/374 (24%), Gaps = 38/374 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYN 141
+ T D D+ G G + + LG L +
Sbjct: 415 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGND 474
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++D + Y A+ +++D+ A + GS
Sbjct: 475 WFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLG-ILADLGAGRVDKLGEAGS 533
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + I G + + + G E +
Sbjct: 534 SAYDTVSGIENVVGTELADRI-------------TGDAQANVLRGAGGADVLAGGEGDDV 580
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------ 313
+ + + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 581 LLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAG 640
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ L +E + + + ++L A + L
Sbjct: 641 AKGVFLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSG 700
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G DV + G D DL G D Y + E
Sbjct: 701 GAGDDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGAGYGHDTIYE 747
Query: 434 GRNPDAFKALEYIA 447
+ A
Sbjct: 748 SGGGHDTIRINAGA 761
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/341 (12%), Positives = 81/341 (23%), Gaps = 46/341 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N +I + + G +G+D + G + N+ G++ G +G D F
Sbjct: 157 IIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLAGGEGHNTVIGGAGDDVFLQDLG 216
Query: 313 SYLYKIYRFENAIIVYDA--------------------------------NEHKQDFLSD 340
+ ++ V N D + +
Sbjct: 217 VWSNQLDGGAGVDTVKYNVHQPSEERLERMGDTGIHADLQNGTVEKWPALNLLSVDHVKN 276
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+E L + + + L + + G D+ +G DI
Sbjct: 277 IENLHGSSLNDSIAGDDRDNELWGDDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQ 336
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
DD+ G D + + + +A
Sbjct: 337 DDE--TVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSREWVRKASALGVDY 394
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
++ ++ + +G D G G
Sbjct: 395 YDSVRNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGD------------GDDLLFG 442
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D L A ++ L D AG D F E
Sbjct: 443 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPARE 483
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/365 (11%), Positives = 74/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSSLNDSIAGDDRDNELWGDDGNDTIRGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSREWVRKASALGVDYYDSV 398
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+VE + Q + + + L G D+
Sbjct: 399 RNVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 458
Query: 390 GLSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 459 YGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLGILA 518
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 519 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 576
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G D L A + L D A G +
Sbjct: 577 ----------GDDVLLGGDGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGND 626
Query: 564 SITFN 568
++ F+
Sbjct: 627 TVDFS 631
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 28/183 (15%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV------KNYIDLNTESWSSIGGYE 257
+ + + + G+D +D + G ++ L S + E
Sbjct: 604 GDDWFFQDAANAGNLLD---GGDGNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPE 660
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + IE+ VGS +DV+IG++ NV +GNDV G +G D
Sbjct: 661 TSNVLRH---IENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGDD--VLLGDEGSDL 715
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ ++ +I E ++ + G
Sbjct: 716 LSGDAGNDDLFGGQGDDTYLF--------------GAGYGHDTIYESGGGHDTIRINAGA 761
Query: 378 DVF 380
D
Sbjct: 762 DQL 764
Score = 39.4 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 26/205 (12%), Positives = 51/205 (24%), Gaps = 29/205 (14%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVF-DGSSGL-DTFFYYAPSYLYKIYRFENAIIV 327
V+G G+DVV+ N++ + +G + + G D+ A + + + N V
Sbjct: 54 DVIGGDGDDVVLANASRIHYDGGAGTNTISYAALGRQDSITVSAEGERFNVRKQLNNANV 113
Query: 328 Y---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y + D L V+ + +
Sbjct: 114 YREGVATQKTAYGKRTENVQYRHVELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDN 173
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
L A + L G D + G D+ + D + +
Sbjct: 174 FLAGGAGDDRLDGGAGNDTLAGGEGHNTVIGGAGDDVFLQDLGVWSNQLDGGAGVDTVKY 233
Query: 421 AAARHYITHGVKEGRNPDAFKALEY 445
+ + G
Sbjct: 234 NVHQPSEERLERMGDTGIHADLQNG 258
>gi|294013166|ref|YP_003546626.1| putative Ca2+-binding hemolysin [Sphingobium japonicum UT26S]
gi|292676496|dbj|BAI98014.1| putative Ca2+-binding hemolysin [Sphingobium japonicum UT26S]
Length = 4159
Score = 81.4 bits (199), Expect = 4e-13, Method: Composition-based stats.
Identities = 87/639 (13%), Positives = 167/639 (26%), Gaps = 102/639 (15%)
Query: 2 HNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGE 61
+N++ +T + L+ DQ+ + + Y + T + + ++ +L
Sbjct: 1009 NNLRVTFTNDT-GSILIDDQFIATRYGDYGWGIETFVFDDGTVWDRATIMNQLQPGSLTS 1067
Query: 62 WSK-VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
S + F+E ++ + D G G T +
Sbjct: 1068 LSDRFDGIQFDEVVESG---------AGNDYITTNNGNDTLMGGTGDDNLIGGFGSDTYV 1118
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV-MSYFMPQDSMMDASFGY 179
LG H + Y ++ +S S A
Sbjct: 1119 W---------NLGDGHDRIEDSNYSETFYPAWVGTNTLRFGAGISASDVILSRDPADRNN 1169
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+D ++ G+ + IE+ D T++D + + +
Sbjct: 1170 LRVTFTNDTGSILIDDQFIGTRYGDYGWGIEIFVFDDG---TVWDRATINSQVVVVTLNN 1226
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
T S +++ G + I+ +++ G +GND + G + +++ G+D
Sbjct: 1227 IQ----GTASNNTLLGMGGDDEISGLDGNDTLDGGAGNDRLDGGNGDDILSGGLGDDWLS 1282
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE--------------------------- 332
G +G DT+ + + V A
Sbjct: 1283 GGAGNDTYLFNLGDGWDVLQDSSGTDTVRFAAGISAGDIRLSQVRQDGDVDGIMLSIAGT 1342
Query: 333 ------HKQDFLSDVERLRFADQCI-----------DSVNVKQRSILEYTASYEDLIQVI 375
Q+ + +ER FAD + V I+ TA + L +
Sbjct: 1343 TNRLHLVGQNGANRIERFEFADGTVWTDADLRQHLYSQVLTAGDDIVRGTAFNDTLSGMG 1402
Query: 376 GQDVFESMKHFYEFGLSEGRD----ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D + G D D L GS DD + + + G
Sbjct: 1403 GDDEIAGVDGNDTLDGGAGNDRLDGGNGDDQLSGGSGDDWLSGGAGNDTYLFN--LGDGW 1460
Query: 432 KEGRNPDAFKALEYIAS-------------HEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
++ + + A D+ N
Sbjct: 1461 DVLQDSSGTDTVRFAAGISAGDIRLSQVRQDGDVDGIMLSIAGTTNRLHLVGQNGANRIE 1520
Query: 479 RFVTFDSYLYLGS------YDDLRNVFGS---DRGAAARHYITHGVKEGRNPDAFKALEY 529
RF D ++ + Y + G E D L+
Sbjct: 1521 RFEFADGTVWTDADLRQHLYSQVLTAGDDIVRGTAFNDTLSGMGGDDEIAGVDGNDTLDG 1580
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
A ++ L D +G D G + FN
Sbjct: 1581 GAGNDRLDGGNGDDQLSGGSGDD--WLSGGAGNDTYLFN 1617
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 88/614 (14%), Positives = 150/614 (24%), Gaps = 77/614 (12%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
T D D G G + N + LG +
Sbjct: 1229 GTASNNTLLGMGGDDEISGLDGNDTLDGGAGNDRLDGGNGDDILSGGLG------DDWLS 1282
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
G D N V+ D++ A+ +S + + G G
Sbjct: 1283 GGAGNDTYLFNLGDGWDVLQDSSGTDTVRFAAGISAGDIRLSQVRQDGDVDGIMLSIAGT 1342
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYIDLNTESWSSIGGYE 257
V Q + I+ + G D + + + I T ++ G
Sbjct: 1343 TNRLHLVGQNGANRIERFEFADGTVWTDADLRQHLYSQVLTAGDDIVRGTAFNDTLSGMG 1402
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ IA +++ G +GND + G + ++ SG+D G +G DT+ +
Sbjct: 1403 GDDEIAGVDGNDTLDGGAGNDRLDGGNGDDQLSGGSGDDWLSGGAGNDTYLFNLGDGWDV 1462
Query: 318 IYRFENAIIVYDANE---------------------------------HKQDFLSDVERL 344
+ V A Q+ + +ER
Sbjct: 1463 LQDSSGTDTVRFAAGISAGDIRLSQVRQDGDVDGIMLSIAGTTNRLHLVGQNGANRIERF 1522
Query: 345 RFADQCI-----------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
FAD + V I+ TA + L + G D +
Sbjct: 1523 EFADGTVWTDADLRQHLYSQVLTAGDDIVRGTAFNDTLSGMGGDDEIAGVDGNDTLDGGA 1582
Query: 394 GRD----ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS- 448
G D D L GS DD + + + G ++ + + A
Sbjct: 1583 GNDRLDGGNGDDQLSGGSGDDWLSGGAGNDTYLFN--LGDGWDVLQDSSGTDTVRFAAGI 1640
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
I D G V + + ++ +D
Sbjct: 1641 SAGDIRLSQVRQDGDVDGIMLSIAGTTNRLHLVGQNGANRIERFEFADGTVWTDADLRQH 1700
Query: 509 HY---ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
Y +T G R L + +++ + G D G
Sbjct: 1701 LYSQVLTAGDDIVRGTAFNDTLSGMGGDDEIAGLDGNDTLDGGKGSD--RLEGGNGNDIY 1758
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDK 625
FN D G + G+ G Q L+ +
Sbjct: 1759 IFNRGDGR----DAIWDSGGSDTVRF----GAGIAPGDLEFTQAQQDGDSNGLTLAIKGT 1810
Query: 626 ADLSLSFDHKKVDL 639
AD L
Sbjct: 1811 ADQLYIIGQAGGSL 1824
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/335 (16%), Positives = 93/335 (27%), Gaps = 11/335 (3%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ F + + S T + S + F AD G G T++
Sbjct: 2090 AGVQFLKFADGSVHSMADVRQA-ALTGQATSGNDLIEGFATADTLTGGAGNDTLIGRGGA 2148
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
ALG + + + D ++ A ++
Sbjct: 2149 DTYHFALGYGEDTIIESDGAANKLVFGAGIATASLRLYRTIDAPDDLIIALPNGTDRVVL 2208
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
D ++ G K S N I+ + D + + ID
Sbjct: 2209 KDQLSSSGRSGVAKISFANGTVW-----DRDKIIEQLLSQPATPYADYLVGSDSADSIDG 2263
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
I G + N +A + + G GNDV+ G +++ G D DG +G D
Sbjct: 2264 LAG-NDFIEGGKGNDILAGSDGNDILFGGIGNDVLYGGEGDDILSGDQGVDTLDGGNGFD 2322
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
T Y + I + + + L +E + + +
Sbjct: 2323 TADYSFSLDSWNIDLAAGTASIIQSTGTAPTETLISIESVVGGLGSDRIKGSDVANRIRG 2382
Query: 365 TASYEDLIQVIGQDVFES---MKHFYEFGLSEGRD 396
A + L G DVF + EG D
Sbjct: 2383 GAGNDILEGRGGDDVFIVEGDEEGIDTIDGGEGYD 2417
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 62/548 (11%), Positives = 130/548 (23%), Gaps = 65/548 (11%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
N + T + + D G+G ++ LG H +
Sbjct: 912 TFYGNHFGETVAAGAGDDHIATGNGDDTLAGGLGNDNLIGGFGSDTYVWNLGDGHDRIED 971
Query: 142 GGYPVYGVDNDYENDSFLTS--------VMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ Y ++ ++S + + +F ++ D +
Sbjct: 972 SNFTEYFYPAWAGTNTLRFGAGISASDVILSRDPADRNNLRVTFTNDTGSILIDDQFIAT 1031
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
YG + ++ + + + L D ++ I
Sbjct: 1032 RYGDYGWGIETFVFDDGTVWDRATIMNQLQPGSLTSLSDRFDGIQFDEVVESGAG-NDYI 1090
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGN--SANNVFFESSGNDVFD-GSSGLDTFFYY 310
N T+ T ++++G G+D + N ++ +S+ ++ F G +T +
Sbjct: 1091 TTNNGNDTLMGGTGDDNLIGGFGSDTYVWNLGDGHDRIEDSNYSETFYPAWVGTNTLRFG 1150
Query: 311 APSYLY---------------KIYRFENAIIVYDANEHKQ---DFLSDVERLRFADQCI- 351
A + + I+ D D+ +E F D +
Sbjct: 1151 AGISASDVILSRDPADRNNLRVTFTNDTGSILIDDQFIGTRYGDYGWGIEIFVFDDGTVW 1210
Query: 352 ------------------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + + + L G D +
Sbjct: 1211 DRATINSQVVVVTLNNIQGTASNNTLLGMGGDDEISGLDGNDTLDGGAGNDRLDGGNGDD 1270
Query: 388 EFGLSEGRDITFDSY-------LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
G D +D L++ G+D A ++ +
Sbjct: 1271 ILSGGLGDDWLSGGAGNDTYLFNLGDGWDVLQDSSGTDTVRFAAGISAGDIRLSQVRQDG 1330
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
+ S N + F +LY +
Sbjct: 1331 DVDGIMLSIAGTTNRLHLVGQNGANRIERFEFADGTVWTDADLRQHLYSQVLT-AGDDIV 1389
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
G E D L+ A ++ L D +G D G
Sbjct: 1390 RGTAFNDTLSGMGGDDEIAGVDGNDTLDGGAGNDRLDGGNGDDQLSGGSGDD--WLSGGA 1447
Query: 561 EGRSITFN 568
+ FN
Sbjct: 1448 GNDTYLFN 1455
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 60/456 (13%), Positives = 110/456 (24%), Gaps = 44/456 (9%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
+ + + + + D G G ++ L LG H
Sbjct: 590 QMVLGGAFTAGADVKTGLDQSDRFASGNGDDTLIGGKGNDNLIGGFGLDTYVWNLGDGHD 649
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSV-MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+ + Y ++ +S S A +D ++
Sbjct: 650 RIEDSNFTEYFYPAWAGTNTLRFGAGISASDVILSRDPADRNNLRVTFTNDTGSILIDDQ 709
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G+ + IE D D D + + L+ + + G
Sbjct: 710 FIATRYGDYGWGIETFVFD--------DGTVWDRATIMNQLQPGSLTSLSDTFYGNHFG- 760
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E+V +G+D + + ++ GND G G DT+ +
Sbjct: 761 ------------ETVAAGAGDDHIATGNGDDTLAGGLGNDNLIGGFGSDTYVWNLGDGHD 808
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+I Y A LRF ++ + ++
Sbjct: 809 RIEDSNFTEYFYPAWA-------GTNTLRFGAG---------------ISASDVILSRDP 846
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D F S D F + Y + D R I + ++ G
Sbjct: 847 ADRNNLRVTFTNDTGSILIDDQFIATRYGDYGWGIETFVFDDGTVWDRATIMNQLQPGSL 906
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
E + D G D + + F S Y+ + D
Sbjct: 907 TSLSDTFYGNHFGETVAAGAGDDHIATGNGDDTLAGGLGNDNLIGGFGSDTYVWNLGDGH 966
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
+ + G R A + I S
Sbjct: 967 DRIEDSNFTEYFYPAWAGTNTLRFGAGISASDVILS 1002
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 57/551 (10%), Positives = 124/551 (22%), Gaps = 74/551 (13%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
N + T + + D G+G ++ LG H +
Sbjct: 753 TFYGNHFGETVAAGAGDDHIATGNGDDTLAGGLGNDNLIGGFGSDTYVWNLGDGHDRIED 812
Query: 142 GGYPVYGVDNDYENDSFLTS--------VMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ Y ++ ++S + + +F ++ D +
Sbjct: 813 SNFTEYFYPAWAGTNTLRFGAGISASDVILSRDPADRNNLRVTFTNDTGSILIDDQFIAT 872
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
YG + ++ + + + L D + I
Sbjct: 873 RYGDYGWGIETFVFDDGTVWDRATIMNQLQPGSLTSLSDTFYGNHFGETVAAGAG-DDHI 931
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGN--SANNVF-FESSGNDVFDGSSGLDTFFYY 310
+ T+A ++++G G+D + N ++ + + +G +T +
Sbjct: 932 ATGNGDDTLAGGLGNDNLIGGFGSDTYVWNLGDGHDRIEDSNFTEYFYPAWAGTNTLRFG 991
Query: 311 APSYLYKIY-----RFENAIIVYDANEHK-------------QDFLSDVERLRFADQCI- 351
A + N + V N+ D+ +E F D +
Sbjct: 992 AGISASDVILSRDPADRNNLRVTFTNDTGSILIDDQFIATRYGDYGWGIETFVFDDGTVW 1051
Query: 352 ----------------------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + + L+ G D
Sbjct: 1052 DRATIMNQLQPGSLTSLSDRFDGIQFDEVVESGAGNDYITTNNGNDTLMGGTGDDNLIGG 1111
Query: 384 KHFYEFGLSEGR------DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
+ + G D + Y FG+ A+
Sbjct: 1112 FGSDTYVWNLGDGHDRIEDSNYSETFYPAWVGTNTLRFGAGISASDVILSRDPADRNNLR 1171
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
F +D + F + + + + +
Sbjct: 1172 VTFTNDTGSILIDDQFIGTRYGDYGWGIEIFVFDDGTVWDRATINSQVVVVTLNN----- 1226
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+ G E D L+ A ++ L D G D
Sbjct: 1227 --IQGTASNNTLLGMGGDDEISGLDGNDTLDGGAGNDRLDGGNGDDILSGGLGDD--WLS 1282
Query: 558 GYEEGRSITFN 568
G + FN
Sbjct: 1283 GGAGNDTYLFN 1293
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 84/558 (15%), Positives = 160/558 (28%), Gaps = 88/558 (15%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG- 133
D + S + V + +E + D G+ + + L+ IG A G
Sbjct: 1764 DGRDAIWDSGGSDTVRFGAGIAPGDLEFTQAQQDGDSNGLTLAIKGTADQLYIIGQAGGS 1823
Query: 134 LMHPGSYNGGYPVYGVDNDY--ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
L+ + G +++ ++ M D+++ S M D A+
Sbjct: 1824 LIERFEFFDGSVWTPQMLTDLRTSNNIGGQQVAVTMGDDTIVGTSGTDTIRGMGGDD-AL 1882
Query: 192 QKIYGAPKGSLG-----NNIYKIEVQQKDSPFIQTIYDSGG-------DDLLDLTLIGGV 239
+ GA + IY + I +SG D D+ L
Sbjct: 1883 RGGMGADTYRFARGDGFDTIYDPDEAAATDVLILDGINSGDVAVMFSPTDTDDIILYIDD 1942
Query: 240 KNYIDLNTESWSSIGGYEKNMTI--AQHTVIESVV---------GSSGNDVVIGNSANNV 288
++ + L+ + +GG I A + + G+ GND++IG++ +
Sbjct: 1943 QSIVYLDQ---NRVGGKTGIDEIRFADGAIWDRATLLAKASGGQGTVGNDLLIGSNFADT 1999
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYK------------------------------- 317
+G+D G +G D + Y A
Sbjct: 2000 LTGGTGDDRLVGGAGNDIYVYNAGDGNDVIVDSADSADSAAATGNVLSFGPGITLADIRL 2059
Query: 318 ---------IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV-----------NVK 357
I F + D L+ V+ L+FAD + S+
Sbjct: 2060 TRNAVDGPLIISFAGQVGSVTLEGSDVDGLAGVQFLKFADGSVHSMADVRQAALTGQATS 2119
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
++E A+ + L G D + + G + + + VFG+
Sbjct: 2120 GNDLIEGFATADTLTGGAGNDTLIGRGGADTYHFALG---YGEDTIIESDGAANKLVFGA 2176
Query: 418 DR-GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
A+ R Y T + + + + L ++ + +
Sbjct: 2177 GIATASLRLYRTIDAPDDLIIALPNGTDRVVLKDQLSSSGRSGVAKISFANGTVWDRDKI 2236
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE--GRNPDAFKALEYIASHE 534
+ ++ + Y Y + S G A +I G D L ++
Sbjct: 2237 IEQLLSQPATPY-ADYLVGSDSADSIDGLAGNDFIEGGKGNDILAGSDGNDILFGGIGND 2295
Query: 535 DLINAFADAPDLVQAGKD 552
L D G D
Sbjct: 2296 VLYGGEGDDILSGDQGVD 2313
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 37/146 (25%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G+D ++ + + F GND+ G D F A + +++
Sbjct: 251 GGDGDDRIVADDTGDDLFGDGGNDLLVGGKLDDWLFGGAGDDVLDAGGGSGNVLIAGEGN 310
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ + V + L + G D E K
Sbjct: 311 DRLVGSNGVSADPMDSGSDWLLGGLGNDRLYGLGGDDYFEGGQGSDFIEGGKGSDTIIFR 370
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSD 418
G S + D FG
Sbjct: 371 AGDGTDRISDIGTDEGDIDVIQFGDG 396
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 61/439 (13%), Positives = 103/439 (23%), Gaps = 72/439 (16%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + T+ G D D + N IDL + S I I
Sbjct: 2302 GDDILSGDQGVDTLDGGNGFDTADYSFSLDSWN-IDLAAGTASIIQ-STGTAPTETLISI 2359
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
ESVVG G+D + G+ N +GND+ +G G D F
Sbjct: 2360 ESVVGGLGSDRIKGSDVANRIRGGAGNDILEGRGGDDVFIVEGDEEGIDTIDGGEGYDRI 2419
Query: 329 DANEH----KQDFLSDVERLRFADQCIDSVNVKQRS--------------ILEYTASYED 370
+A L++VE + + + ++ A +
Sbjct: 2420 EAAADDTIIGLSSLANVELIAANGHANVRIEGTDENDVLDLSAAELSGIVSIDLGAGNDI 2479
Query: 371 LIQVIGQDVFESMKH------------FYEFGLSEGRDITF----DSYLYLGSYDDLRNV 414
L +G D + EG D ++ + L SY ++ +
Sbjct: 2480 LTGTLGADTINAGAGDDIIRYVGQGAGADVVDGGEGVDRIEAAADNAIIRLASYQNIEAI 2539
Query: 415 FGSDRG------------AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
G G+ E + +
Sbjct: 2540 SGGQFTGVVLVRTDAAETTNLSGLSVSGLSRIDLEGGDDIFIGTNQAETVRGGQGNDTLS 2599
Query: 463 VQVGKDHFSNFGCEEGRFV-----TFDSYLYLGSYD--------DLRNVFGSDRGAAARH 509
G D F G G FD+ + + G+
Sbjct: 2600 GNGGDDIFDYVGTANGIDSISGGDGFDTVRASADNTRIVLSSLTSVERLTGNGYANVVVE 2659
Query: 510 YITHGVKEGRN-----------PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
+ + ++ L+ + V H FG
Sbjct: 2660 WGASNDILNFSAVVLDGLTLETGGGNDSVTLTGGGIVLVGGTGNDTFTVSGNGGHTFKFG 2719
Query: 559 YEEGRSITFNPDLYLTSYD 577
+G NP D
Sbjct: 2720 AGDGNDTLTNPGSGYARND 2738
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 62/407 (15%), Positives = 111/407 (27%), Gaps = 69/407 (16%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E + + N+G V + I + D + + + + EI A
Sbjct: 1907 EAAATDVLILDGINSGDVAVMFSPTDTDDIILY-IDDQSIVYLDQNRVGGKTGIDEIRFA 1965
Query: 132 LG-----LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
G +GG G D ++ T + + Y
Sbjct: 1966 DGAIWDRATLLAKASGGQGTVGNDLLIGSNFADTLTGGTGDDRLVGGAGNDIYVYNAGDG 2025
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+ V V A + N+ + T G ++ G
Sbjct: 2026 NDVIVDSADSADSAAATGNVLSFGPGITLADIRLTRNAVDGPLIISFAGQVGSVTL---- 2081
Query: 247 TESWSSIGGYEKNMTIAQHTV---------IESVVGSSGNDVVIGNSANNVFFESSGNDV 297
S + + A +V + +SGND++ G + + +GND
Sbjct: 2082 EGSDVDGLAGVQFLKFADGSVHSMADVRQAALTGQATSGNDLIEGFATADTLTGGAGNDT 2141
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENA------------------------IIVYDANEH 333
G G DT+ + I + A + A +
Sbjct: 2142 LIGRGGADTYHFALGYGEDTIIESDGAANKLVFGAGIATASLRLYRTIDAPDDLIIALPN 2201
Query: 334 KQDFL-----------SDVERLRFADQCIDSVNVKQ-----------RSILEYTASYEDL 371
D + S V ++ FA+ + + L + S + +
Sbjct: 2202 GTDRVVLKDQLSSSGRSGVAKISFANGTVWDRDKIIEQLLSQPATPYADYLVGSDSADSI 2261
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNV 414
+ G D E K S+G DI F + LY G DD+ +
Sbjct: 2262 DGLAGNDFIEGGKGNDILAGSDGNDILFGGIGNDVLYGGEGDDILSG 2308
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 38/120 (31%), Gaps = 10/120 (8%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGND-----VVIGNSANNVFFESSGNDVFDGSSGLDT 306
I N+ Q VG ++ + +++ +GND DG +G D
Sbjct: 3825 VIAADGDNVLRFQGIGAGDAVGGQIDNVQLFATQSAGTGSDILTGGAGNDWLDGGAGADM 3884
Query: 307 FFYYAPSYLYKIYRFENAIIVYDA-----NEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ Y + + + D+ D L +E + F D ++ +
Sbjct: 3885 AVFSGAMADYTVVTTNGTVTIVDSQPLLDGNDGTDTLVGIETVSFRDGSLNLAAPIVLDL 3944
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 60/399 (15%), Positives = 102/399 (25%), Gaps = 39/399 (9%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI----------DLNTES--- 249
GN+ Y + + D L L + + DL T
Sbjct: 2967 GNDTYVYASGDGNDHIVDYNGGVADSDTLKLVNLNPGDVELRRWGDQLYIKDLTTGQEIW 3026
Query: 250 -----WSSIGGYEKNMTIAQHTVIE--------SVVGSSGNDVVIGNSANNVFFESSGND 296
SS +N+ A TV + G++G + + G+ A + G+D
Sbjct: 3027 VEIQFHSSGSYAVENIQFADGTVWNLARIQQEAWIRGTAGAETIDGSGAADTIVGKQGDD 3086
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G G DT+ Y + I + + D + DVE R DQ
Sbjct: 3087 FLRGGQGNDTYVYASGDGNDHIVDYNGGVTDSDTLKLVNLNPGDVELRRSGDQLYVKDLT 3146
Query: 357 KQRSI-----LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ I + SY ++ + G + + L
Sbjct: 3147 TGQQIWVEIQFHSSGSYAVENIQFADGTVWNLARIKQEAWYRGTSAG-ERIDGNSEGNTL 3205
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDH 469
G+D T+ + G D + + D ++
Sbjct: 3206 LGKEGNDHLVGGAGSDTYVYQSGDGSDRIEDSPSTTTDVDRLVLLDLNPDDVTFSRVTST 3265
Query: 470 FSNFGCEEGRFVTFD---SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
G +T D + S F + G R D +
Sbjct: 3266 GYMKVNATGEVLTIDYQFWNELVESRGLEEIQFADGTIWNRSQILAAGWF--RGGDGNDS 3323
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
L A+ D + AG D + + I
Sbjct: 3324 LSGYATANTFEGGKGDDYLVGAAGDDTYVYRSGDGSDHI 3362
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 45/133 (33%), Gaps = 5/133 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + ++ GG+DLL + GG N+ IA
Sbjct: 254 GDDRIVADDTGDDLFGDGGNDLL--VGGKLDDWLFGGAGDDVLDAGGGSGNVLIA-GEGN 310
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +VGS+G +S ++ GND G G D ++ I + + +
Sbjct: 311 DRLVGSNGVSADPMDSGSDWLLGGLGNDRLYGLGGDD--YFEGGQGSDFIEGGKGSDTII 368
Query: 329 DANEHKQDFLSDV 341
D +SD+
Sbjct: 369 FRAGDGTDRISDI 381
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 37/282 (13%), Positives = 77/282 (27%), Gaps = 72/282 (25%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI----------DLNTES--- 249
G++IY + + D L L + + +L T
Sbjct: 2841 GDDIYLYASGDGNDHIVDYNNGVADSDTLKLIDLNPGDVELRRSGDQLYVKNLTTGQEIW 2900
Query: 250 -----WSSIGGYEKNMTIAQHTVIE--------SVVGSSGNDVVIGNSANNVFFESSGND 296
SS +N+ A T+ + G+ G + + G+ A + ND
Sbjct: 2901 VEIQFHSSTRYAIENIQFADGTIWDLARIQQEAWYRGTVGAETIDGSGAADTIVGKQEND 2960
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAI------------------------------- 325
G G DT+ Y + I + +
Sbjct: 2961 FLRGGQGNDTYVYASGDGNDHIVDYNGGVADSDTLKLVNLNPGDVELRRWGDQLYIKDLT 3020
Query: 326 ---IVYDANEHKQDFLSDVERLRFADQCIDSV----------NVKQRSILEYTASYEDLI 372
++ + VE ++FAD + ++ ++ + + + ++
Sbjct: 3021 TGQEIWVEIQFHSSGSYAVENIQFADGTVWNLARIQQEAWIRGTAGAETIDGSGAADTIV 3080
Query: 373 QVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLR 412
G D + + +G D D + D L+
Sbjct: 3081 GKQGDDFLRGGQGNDTYVYASGDGNDHIVDYNGGVTDSDTLK 3122
Score = 47.1 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 49/431 (11%), Positives = 105/431 (24%), Gaps = 77/431 (17%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + G + + G G + L
Sbjct: 2582 GTNQAETVRGGQGNDTLSGNGGDDIFDYVGTANGIDSISGGDGFDTVRASADNTRIVLSS 2641
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G V ++ + + + + + ++ T IV V
Sbjct: 2642 LTSVERLTGNGYANVVVEWGASNDILNFSAVVLDGLTLETGGGNDSVTLTGGGIVLVGGT 2701
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS--- 251
GN + + D T SG L L+G + + L
Sbjct: 2702 GNDTFTVSGNGGHTFKFGAGDGNDTLTNPGSGYARNDILQLVGLNADEVSLTRSGDQLKV 2761
Query: 252 --------------------SIGGYEKNMTIAQHTVIESVV--------GSSGNDVVIGN 283
++ A TV + G++ + + G
Sbjct: 2762 AITATGEVFNVAYQFWGEAQGAQYGLGSIAFADGTVWDRARIQREARIRGTAAGERIDGT 2821
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI------------------ 325
SA N + G+D G+ G D + Y + I + N +
Sbjct: 2822 SAPNTIQGNGGDDFLLGAGGDDIYLYASGDGNDHIVDYNNGVADSDTLKLIDLNPGDVEL 2881
Query: 326 ----------------IVYDANEHKQDFLSDVERLRFADQCIDSV----------NVKQR 359
++ + +E ++FAD I +
Sbjct: 2882 RRSGDQLYVKNLTTGQEIWVEIQFHSSTRYAIENIQFADGTIWDLARIQQEAWYRGTVGA 2941
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
++ + + + ++ D + + +G D D + D L+ V +
Sbjct: 2942 ETIDGSGAADTIVGKQENDFLRGGQGNDTYVYASGDGNDHIVDYNGGVADSDTLKLVNLN 3001
Query: 418 DRGAAARHYIT 428
R +
Sbjct: 3002 PGDVELRRWGD 3012
Score = 44.8 bits (104), Expect = 0.046, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 58/258 (22%), Gaps = 58/258 (22%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA- 330
G GND + G + N F G+D G++G DT+ Y + I+ + D
Sbjct: 3316 RGGDGNDSLSGYATANTFEGGKGDDYLVGAAGDDTYVYRSGDGSDHIWDYNAGASDTDTL 3375
Query: 331 ---------------------------------NEHKQDFLSDVERLRFADQCI------ 351
D VER++FAD +
Sbjct: 3376 KLVDLNPSDVELRRSGDHLYVKDLTTGQEIWIEYHFYSDSRDVVERIQFADGTVWDRSNI 3435
Query: 352 ----------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+IL A + ++ + G D D
Sbjct: 3436 AAFVATAGNDTITGNSGANILRGFAGDDGIVGLAGDDTVYGDDGNDLLYG--------DG 3487
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
G + F + + Y + +
Sbjct: 3488 LGSTGPNLIVNGSFEEQGTNPSYQSWGVWLDAIPGWIKSNPGRYNQTSSGFSGIPSTEGQ 3547
Query: 462 LVQVGKDHFSNFGCEEGR 479
D G + R
Sbjct: 3548 YYLDLDDAGQVGGNMDIR 3565
Score = 44.4 bits (103), Expect = 0.071, Method: Composition-based stats.
Identities = 72/615 (11%), Positives = 153/615 (24%), Gaps = 57/615 (9%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
SD + D D+ GIG + + G+
Sbjct: 2254 GSDSADSIDGLAGNDFIEGGKGNDILAGSDGNDILFGGIGNDVLYGGEGDDILSGDQGVD 2313
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI------- 188
NG + + L + + + +V +
Sbjct: 2314 TLDGGNGFDTADYSFSLDSWNIDLAAGTASIIQSTGTAPTETLISIESVVGGLGSDRIKG 2373
Query: 189 --VAVQKIYGAPKG----SLGNNIYKIEVQQKDSPFIQ-----TIYDSGGDDLLDLTLIG 237
VA + GA G++++ +E ++ I ++ DD +
Sbjct: 2374 SDVANRIRGGAGNDILEGRGGDDVFIVEGDEEGIDTIDGGEGYDRIEAAADDTIIGLSSL 2433
Query: 238 GVKNYIDLNTESWSSIGGYEKNM-------------TIAQHTVIESVVGSSGNDVVIGNS 284
I N + I G ++N +I + + G+ G D + +
Sbjct: 2434 ANVELIAANGHANVRIEGTDENDVLDLSAAELSGIVSIDLGAGNDILTGTLGADTINAGA 2493
Query: 285 ANNVFF---ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+++ + +G DV DG G+D A + + ++ ++N + +
Sbjct: 2494 GDDIIRYVGQGAGADVVDGGEGVDRIEAAADNAIIRLASYQNIEAISGGQFTGVVLVRTD 2553
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ ++V S ++ + I + + + G DI FD
Sbjct: 2554 AA---ETTNLSGLSVSGLSRIDLEGGDDIFIGTNQAETVRGGQGNDTLSGNGGDDI-FDY 2609
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
D + G D A+ + + + Y ++ + ++
Sbjct: 2610 VGTANGIDSISGGDGFDTVRASADNTRIVLSSLTSVERLTGNGY--ANVVVEWGASNDIL 2667
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR----HYITHGVKE 517
G + + L + + H G +
Sbjct: 2668 NFSAVVLDGLTLETGGG-----NDSVTLTGGGIVLVGGTGNDTFTVSGNGGHTFKFGAGD 2722
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT----FNPDLYL 573
G + Y + + + D G F +
Sbjct: 2723 GNDTLTNPGSGYARNDILQLVGLNADEVSLTRSGDQLKVAITATGEVFNVAYQFWGEAQG 2782
Query: 574 TSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFD 633
Y F +E R G + + + +
Sbjct: 2783 AQYGLGSIAFADGTVWDRARI----QREARIRGTAAGERIDGTSAPNTIQGNGGDDFLLG 2838
Query: 634 HKKVDLYTDYFGDGN 648
D+Y GDGN
Sbjct: 2839 AGGDDIYLYASGDGN 2853
Score = 41.3 bits (95), Expect = 0.48, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 47/147 (31%), Gaps = 23/147 (15%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI----------DLNTES-- 249
G++ Y + D L L + + DL T
Sbjct: 3346 AGDDTYVYRSGDGSDHIWDYNAGASDTDTLKLVDLNPSDVELRRSGDHLYVKDLTTGQEI 3405
Query: 250 ------WSSIGGYEKNMTIAQHTV-----IESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+S + + A TV I + V ++GND + GNS N+ +G+D
Sbjct: 3406 WIEYHFYSDSRDVVERIQFADGTVWDRSNIAAFVATAGNDTITGNSGANILRGFAGDDGI 3465
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAI 325
G +G DT + + L +
Sbjct: 3466 VGLAGDDTVYGDDGNDLLYGDGLGSTG 3492
Score = 39.4 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 78/578 (13%), Positives = 129/578 (22%), Gaps = 121/578 (20%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + ++ + G D + + D G G + + + A
Sbjct: 252 GDGDDRIVADDTGDDLF--GDGGNDLLVGGKLDDWLFGGAGDDVLDAGGGSGNVLIA--- 306
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G N + DS ++ Y SD + K
Sbjct: 307 ---GEGNDRLVGSNGVSADPMDSGSDWLLGGLGNDRLYGLGGDDYFEGGQGSDFIEGGKG 363
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT------------LIGGVKNY 242
G+ +I D I I G D+ L+G +
Sbjct: 364 SDTIIFRAGDGTDRISDIGTDEGDIDVIQFGDGIAPTDVGVVASSSSIDMSMLLGAGGDR 423
Query: 243 IDLNTESWSSIGGYEKNM--------------TIAQHTVIESVVGSSGNDVVIGNSANNV 288
IDL + +S G E I + GS + V G ++
Sbjct: 424 IDLRGAALTSRAGIEFFDFGSTIWSRGQITAQAIFAKNAGSIISGSGTAESVDGTRYDDA 483
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE----------------NAIIVYDANE 332
+G D G G D++ + + I I V +
Sbjct: 484 LSGGAG-DTLRGGYGSDSYRFALGDGVVTIDERSFASDLDIVTFASSIALADITVTVDPD 542
Query: 333 HKQDF---------------------LSDVERLRFADQC--------------------I 351
QD ++ +E LRFAD
Sbjct: 543 ASQDLIVHVGSAGDRLILKNQDIDSGVNSIEELRFADGTSLTLGDLYQMVLGGAFTAGAD 602
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR------DITFDSYLYL 405
+ Q + LI G D + + G D F Y Y
Sbjct: 603 VKTGLDQSDRFASGNGDDTLIGGKGNDNLIGGFGLDTYVWNLGDGHDRIEDSNFTEYFYP 662
Query: 406 GSYDDLRNVFGSDRGA---------AARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
FG+ A A R+ + + D
Sbjct: 663 AWAGTNTLRFGAGISASDVILSRDPADRNNLRVTFTNDTGSILIDDQFIATRYGDYGWGI 722
Query: 457 ADAPDLVQVGKDHFSNFGC-EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
D + + G + Y + + D A
Sbjct: 723 ETFVFDDGTVWDRATIMNQLQPGSLTSLSDTFYGNHFGETVAAGAGDDHIA--------- 773
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ L +++LI F + G H
Sbjct: 774 ----TGNGDDTLAGGLGNDNLIGGFGSDTYVWNLGDGH 807
>gi|300865489|ref|ZP_07110280.1| hypothetical protein OSCI_1900008 [Oscillatoria sp. PCC 6506]
gi|300336509|emb|CBN55430.1| hypothetical protein OSCI_1900008 [Oscillatoria sp. PCC 6506]
Length = 1497
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/328 (13%), Positives = 80/328 (24%), Gaps = 12/328 (3%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
I + DV G + + + LG
Sbjct: 87 TLQGGTGGNVLYGGKDNDTCIGGEGNDVASGDDGDDVAMGNGGDDRVTGDLGDDTAFGGK 146
Query: 142 GGYPVYGVDND--YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
G G D + V C +D ++ +
Sbjct: 147 GKDRCEGGDGTDWVHGNQDDDDVSGGDGSDSLYGGKGNDICDGDDGNDTISGDRGNDTCS 206
Query: 200 GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G GN+ T G+D+ D GG N + ++ G
Sbjct: 207 GGAGNDSISGGGGNDSIVGEQGSDTCIGGDGNDVAD----GGDDNDSIVGGGGDDTLMGG 262
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N + + +S+ G +G+D ++G N+V +G+D G SG DT +
Sbjct: 263 DGNDACSGNEGDDSISGDAGDDSLLGGDGNDVCEGGAGDDSLVGDSGKDTLV--GGTGND 320
Query: 317 KIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + + + + + + L
Sbjct: 321 ACDGGTGSDSIVGGDGNDTCLGDDGDDTILGGGGDDSLNGGAGNDAIAAGQGNNSLEGGA 380
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYL 403
G D E EG D
Sbjct: 381 GDDSLEGGDGDNSLSGGEGNDTLTGGTG 408
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/329 (14%), Positives = 86/329 (26%), Gaps = 11/329 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G + DL + G + N + GG N+ + ++ +G GNDV G+ +
Sbjct: 63 GTNDNDLIVGGTGGKTLYGNKGEDTLQGGTGGNV-LYGGKDNDTCIGGEGNDVASGDDGD 121
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+V + G+D G G DT F + + V+ + D +
Sbjct: 122 DVAMGNGGDDRVTGDLGDDTAF--GGKGKDRCEGGDGTDWVHGNQDDDDVSGGDGSDSLY 179
Query: 347 ADQCIDS-VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYL 403
+ D + + G D +G D D
Sbjct: 180 GGKGNDICDGDDGNDTISGDRGNDTCSGGAGNDSISGGGGNDSIVGEQGSDTCIGGDGND 239
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
DD ++ G G + ++ A + L+ +
Sbjct: 240 VADGGDDNDSIVGGGGDDTLM--GGDGNDACSGNEGDDSISGDAGDDSLLGGDGNDVCEG 297
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
G D ++ + G V G G
Sbjct: 298 GAGDDSLVGDSGKDTLVGGTGNDACDGGTGSDSIVGGDGNDTCL---GDDGDDTILGGGG 354
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKD 552
+L A ++ + + AG D
Sbjct: 355 DDSLNGGAGNDAIAAGQGNNSLEGGAGDD 383
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/262 (15%), Positives = 68/262 (25%), Gaps = 11/262 (4%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
I + T D D G G +I+ G
Sbjct: 179 YGGKGNDICDGDDGNDTISGDRGNDTCSGGAGNDSISGGGGNDSIVGEQGSDTCIGGDGN 238
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ + G D + D + G + + D V +
Sbjct: 239 DVADGGDDNDSIVGGGGDDTLMGGDGNDACSGNEGDDSISGDAG-DDSLLGGDGNDVCEG 297
Query: 195 YGAPKGSLGNNIY------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+G++ +I G+D +G + L
Sbjct: 298 GAGDDSLVGDSGKDTLVGGTGNDACDGGTGSDSIVGGDGNDT----CLGDDGDDTILGGG 353
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S+ G N IA S+ G +G+D + G +N GND G +G T
Sbjct: 354 GDDSLNGGAGNDAIAAGQGNNSLEGGAGDDSLEGGDGDNSLSGGEGNDTLTGGTGNHTCV 413
Query: 309 YYAPSYLYKIYRFENAIIVYDA 330
A + ++ I + A
Sbjct: 414 GGAGNDVFIIKNVTSGGKSTIA 435
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/303 (11%), Positives = 69/303 (22%), Gaps = 8/303 (2%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+GGDD + D T GG + + G + + ++
Sbjct: 111 GNDVASGDDGDDVAMGNGGDDRVTGDLGDDTAFGGKGKDRCEGGDGTDWVHGNQDDDDVS 170
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+S+ G GND+ G+ N+ GND G +G D+ I +
Sbjct: 171 GGDGSDSLYGGKGNDICDGDDGNDTISGDRGNDTCSGGAGNDSI--SGGGGNDSIVGEQG 228
Query: 324 AIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + D D + + + + + G D
Sbjct: 229 SDTCIGGDGNDVADGGDDNDSIVGGGGDDTLMGGDGNDACSGNEGDDSISGDAGDDSLLG 288
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G D N + G D
Sbjct: 289 GDGNDVCEGGAGDDSLVGDSGKDTLVGGTGNDACDGGTGSDSIVGGDGNDTCLGDDGDDT 348
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ + L + G + ++ G + G+
Sbjct: 349 ILGGGGDDSLNGGAGNDAIAAGQGNNSLEGGAGDDSLEGGDGDNSLSGGEGNDTLTGGTG 408
Query: 503 RGA 505
Sbjct: 409 NHT 411
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 31/91 (34%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
G + S +S+ G N TI +S+ G +G+D + G N+ G
Sbjct: 1317 GYGFSGPVLFTGNASNNSVLGTAFNDTIFGGEGDDSMSGGNGSDSLSGGIGNDTLIGGFG 1376
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
D DG G D F + +
Sbjct: 1377 TDALDGGVGNDVFVFNGTDAAGSDFITNYGT 1407
>gi|163740316|ref|ZP_02147710.1| type I secretion target repeat protein [Phaeobacter gallaeciensis
2.10]
gi|161386174|gb|EDQ10549.1| type I secretion target repeat protein [Phaeobacter gallaeciensis
2.10]
Length = 937
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 50/309 (16%), Positives = 94/309 (30%), Gaps = 13/309 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ Q T+ G+D L D +L+GGV N + T+ + ++ G + + T+
Sbjct: 323 GDDQLSTGIGNDTLLGGEGNDTLNNSAGDDSLVGGVGNDSIVATDGFDTLEGGDGDDTMY 382
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ ++G + ND++ G + N+ GNDV DG G DT +
Sbjct: 383 GGNDDDLLLGGADNDLMYGETGNDSLDGGDGNDVMDGGVGNDTL-MGGLGADTIAGGDGD 441
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
I + + L N L + ++ G D E
Sbjct: 442 DYIDGGDGDDSLTTGLGNDTLIGGAGNDTLRNSAGDDSLVGGTGDDSIVATDGNDTLEGG 501
Query: 384 KHFYEFGLSEGRDITF----DSYLYLGSYDD---LRNVFGSDRGAAARHYITHGVKEGRN 436
D+ D +Y + D + + FG+D + + N
Sbjct: 502 DGADTMYGGNDDDLLVGGAGDDKMYGEADADTFQMSDGFGNDTISGGEAGNDSDHIDMSN 561
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ ++ Y I AD ++ + ++ D
Sbjct: 562 VTSSVSVTYSGFETGQITDGADTISFSEIEQLTLTDQADVVDASADNAGVNIDAGAGDDT 621
Query: 497 NVFGSDRGA 505
FG +
Sbjct: 622 ITFGEGDDS 630
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 58/416 (13%), Positives = 111/416 (26%), Gaps = 38/416 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + D G +++ I G
Sbjct: 310 SGGDGDDYIEGGEGDDQLSTGIGNDTLLGGEGNDTLNNSAGDDSLVGGVGNDSIVATDGF 369
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G +YG ++D + + Y + +D G +
Sbjct: 370 DTLEGGDGDDTMYGGNDDDLLLGGADNDLMYGETGNDSLDGGDGNDVMDGGVGNDTLMGG 429
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
GA + G + ++ G+D L GG N N+ S+
Sbjct: 430 LGADTIAGG----DGDDYIDGGDGDDSLTTGLGNDTLI----GGAGNDTLRNSAGDDSLV 481
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + +I +++ G G D + G + +++ +G+D G + DTF
Sbjct: 482 GGTGDDSIVATDGNDTLEGGDGADTMYGGNDDDLLVGGAGDDKMYGEADADTFQMSDGFG 541
Query: 315 LYKIYR----------------------FENAIIVYDANEHKQDFLSDVERLRFADQCID 352
I + + S++E+L DQ
Sbjct: 542 NDTISGGEAGNDSDHIDMSNVTSSVSVTYSGFETGQITDGADTISFSEIEQLTLTDQADV 601
Query: 353 SVNVKQRSI--LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG------RDITFDSYLY 404
+ ++ A + + G D + L+EG D +
Sbjct: 602 VDASADNAGVNIDAGAGDDTITFGEGDDSITGGAGDDDLLLTEGGGVDTVSDFDLNDDDG 661
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
G Y+D +V G+ + G + AL E L+
Sbjct: 662 NGFYNDQLDVSDLAGGSGTGGAVRTGDVAVADDGFGNALLTFPGGEQLVLQGVTPA 717
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/280 (11%), Positives = 55/280 (19%), Gaps = 25/280 (8%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
I ++ GNDV G G D+ ++ I
Sbjct: 245 TTIIEQGDDTVMGGDGNDVVYGQGGNDSLLGEEGDDSLDGGDGDDVIEGGV--------- 295
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ L + + G D + EG D
Sbjct: 296 ----------GADTLMGGSGGDTLSGGDGDDYIEGGEGDDQLSTGIGNDTLLGGEGNDTL 345
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+S + N G + L A ++ + +
Sbjct: 346 NNSAGDDSLVGGVGNDSIVATDGFDTLEGGDGDDTMYGGNDDDLLLGGADNDLMYGETGN 405
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH----- 513
G D + + G D G +
Sbjct: 406 DSLDGGDGNDVMDGGVGNDTLMGGLGADTIAGGDGDDYIDGGDGDDSLTTGLGNDTLIGG 465
Query: 514 -GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G RN +L + ++ + G D
Sbjct: 466 AGNDTLRNSAGDDSLVGGTGDDSIVATDGNDTLEGGDGAD 505
>gi|304320918|ref|YP_003854561.1| putative hemolysin-adenlyate cyclase protein [Parvularcula
bermudensis HTCC2503]
gi|303299820|gb|ADM09419.1| putative hemolysin-adenlyate cyclase protein [Parvularcula
bermudensis HTCC2503]
Length = 644
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 86/275 (31%), Gaps = 19/275 (6%)
Query: 222 IYDSGGDDLLDLT---------LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ G D +D + L K+ + LN E+ I G E + + +
Sbjct: 266 LIGGQGYDTVDFSQIAKDVRAALTPSDKSRVTLNGETTLYIEGIENAI---GGSGADMFS 322
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G+++++GN ++ G D DG +G DT Y + E A
Sbjct: 323 GGDGSNILLGNGGDDELKGGHGPDKLDGGAGDDTVDYSYTDKALILTLAEGAYTAPFVGS 382
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
++D L D+E + + + + + + + + G DVF + +
Sbjct: 383 IQEDVLRDLENVIGGNGDDIVIGDDRPNRFDAGSGNDTFQGGGGVDVFGGSRGNDTASYA 442
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFKALEYIAS 448
D + L SYD R G ++ G + A+
Sbjct: 443 ---DQVLSVSVTLASYDSARVYIGGVPDDILKNVENLIGGSGDDYLAGDENGNAILGGPG 499
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ L+ + G D G +
Sbjct: 500 DDLLMGEGGNDLLEGGEGSDRLIGGGGNDELIGGL 534
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 70/210 (33%), Gaps = 25/210 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + K + GDD +D + + L ++++ + +
Sbjct: 334 GGDDELKGGHGPDKLDGGAGDDTVDYS-YTDKALILTLAEGAYTAPFVGSIQEDVLRD-- 390
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFYYAP--SYLY 316
+E+V+G +G+D+VIG+ N F SGND F GS G DT Y S
Sbjct: 391 LENVIGGNGDDIVIGDDRPNRFDAGSGNDTFQGGGGVDVFGGSRGNDTASYADQVLSVSV 450
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI---------DSVNVKQRSILEYTAS 367
+ +++A + D L +VE L + +L
Sbjct: 451 TLASYDSARVYIGGVPD--DILKNVENLIGGSGDDYLAGDENGNAILGGPGDDLLMGEGG 508
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ L G D E +D+
Sbjct: 509 NDLLEGGEGSDRLIGGGGNDELIGGLSKDV 538
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 61/249 (24%), Gaps = 30/249 (12%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN- 155
I AD++ G G +L + E+ G G V D
Sbjct: 308 GIENAIGGSGADMFSGGDGSNILLGNGGDDELKGGHGPDKLDGGAGDDTVDYSYTDKALI 367
Query: 156 -------DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ + + G ++ D + G+ +
Sbjct: 368 LTLAEGAYTAPFVGSIQEDVLRDLENVIGGNGDDIVIGDDRPNRFDAGSGNDTFQGGGGV 427
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-------------DLNTESWSSIGG 255
+ D + L + YI + + G
Sbjct: 428 DVFGGSRGNDTASYADQVLSVSVTLASYDSARVYIGGVPDDILKNVENLIGGSGDDYLAG 487
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSSGLDT 306
E I + ++G GND++ G ++ GND V G G D
Sbjct: 488 DENGNAILGGPGDDLLMGEGGNDLLEGGEGSDRLIGGGGNDELIGGLSKDVMIGGPGSDR 547
Query: 307 FFYYAPSYL 315
YY+
Sbjct: 548 MIYYSAEDS 556
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 34/295 (11%), Positives = 71/295 (24%), Gaps = 21/295 (7%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+ V++ + + G G DT + + + + N
Sbjct: 245 DAVLVAAGGKGDIWPGTAKGKLIGGQGYDTVDFSQIAKDVRAALTPSDKSRVTLNGETTL 304
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
++ +E +++ + L+ G D + + G D
Sbjct: 305 YIEGIE---------NAIGGSGADMFSGGDGSNILLGNGGDDELKGGHGPDKLDGGAGDD 355
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
Y Y L G+ +++ N + + +
Sbjct: 356 TV--DYSYTDKALILTLAEGAYTAPFVGSIQEDVLRDLENVIGGNGDDIVIGDDRPNRFD 413
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT------FDSYLYLGSYDDLRNVFGSDRGAAARHY 510
A + + G FG G + L SYD R G ++
Sbjct: 414 AGSGNDTFQGGGGVDVFGGSRGNDTASYADQVLSVSVTLASYDSARVYIGGVPDDILKNV 473
Query: 511 IT----HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
G + A+ + L+ + G D G +
Sbjct: 474 ENLIGGSGDDYLAGDENGNAILGGPGDDLLMGEGGNDLLEGGEGSDRLIGGGGND 528
Score = 44.4 bits (103), Expect = 0.058, Method: Composition-based stats.
Identities = 51/382 (13%), Positives = 96/382 (25%), Gaps = 25/382 (6%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDT 306
S S++ + + V +V + G + +A G D D D
Sbjct: 225 GSQSAMSVALGPSSQSAKNVDAVLVAAGGKGDIWPGTAKGKLIGGQGYDTVDFSQIAKDV 284
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
PS ++ +Y S + D + L+
Sbjct: 285 RAALTPSDKSRVT-LNGETTLYIEGIENAIGGSGADMFSGGDGSNILLGNGGDDELKGGH 343
Query: 367 SYEDLIQVIGQDVFES-------------MKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ L G D + + F S D+ D +G D
Sbjct: 344 GPDKLDGGAGDDTVDYSYTDKALILTLAEGAYTAPFVGSIQEDVLRDLENVIGGNGDDIV 403
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ + G D F + + + L
Sbjct: 404 IGDDRPNRFDAGSGNDTFQGGGGVDVFGGSRGNDTASYADQVLSVSVTLASYDSARVYIG 463
Query: 474 GCEE------GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
G + + YL ++ + G + + EG L
Sbjct: 464 GVPDDILKNVENLIGGSGDDYLAGDENGNAILGGPGDDLLMGEGGNDLLEGGEGS--DRL 521
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD--DLWNVFGS 585
+++LI + + G D + E+ + T+ D DL NV +
Sbjct: 522 IGGGGNDELIGGLSKDVMIGGPGSDRMIYYSAEDSLPEDMDCLCDFTAEDRVDLSNVDAN 581
Query: 586 DRSAAAQHYITHGMKEGRALGI 607
++ Q + GRA +
Sbjct: 582 YWTSGHQRFRLTRYFTGRAGEL 603
Score = 44.0 bits (102), Expect = 0.082, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 43/167 (25%), Gaps = 19/167 (11%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
N G D S S D T D A I G P
Sbjct: 410 NRFDAGSGNDTFQGGGGVDVFGGSRGNDTASYADQVLSVSVTLASYD-SARVYIGGVP-- 466
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++I K + + + L + G N
Sbjct: 467 ---DDILKNVENLIGGSGDDYLAGDENGNAI-------------LGGPGDDLLMGEGGND 510
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + ++G GND +IG + +V G+D S D+
Sbjct: 511 LLEGGEGSDRLIGGGGNDELIGGLSKDVMIGGPGSDRMIYYSAEDSL 557
>gi|114761544|ref|ZP_01441459.1| VCBS [Pelagibaca bermudensis HTCC2601]
gi|114545792|gb|EAU48794.1| VCBS [Roseovarius sp. HTCC2601]
Length = 3409
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 66/439 (15%), Positives = 117/439 (26%), Gaps = 43/439 (9%)
Query: 83 SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
+ T D + G ++L E+G LG
Sbjct: 705 FTGTSGADTFEGGEGDDTATGLGGNDTFNGNGGNDSLLGGADSDELGGGLGNDFLSGGTE 764
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP---- 198
+YG D D + SY +DS D+ V D + G
Sbjct: 765 NDTLYGDDGDDTLEGGDGDDYSYNSGRDSGDDSIDMGAGDDTVYDADGNNTVLGGDGNDR 824
Query: 199 ---------KGSLGNNI--YKIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYI 243
G G++ Y + T+ G+D + G +Y
Sbjct: 825 LWYVSGESIDGGTGDDSIRYYNYHNDAVNARNVTVEGGDGNDTIQDHGSYDYNNGNLSYD 884
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ G TI +S+ G++GND + G + N+ +G+D +G G
Sbjct: 885 LRGGAGNDTVRGSSYGDTIDGGADDDSLAGNNGNDSMTGGTGNDSMSGGTGDDTLEGGDG 944
Query: 304 LDTFF----------------------YYAPSYLYKIYRFENAIIVYDA--NEHKQDFLS 339
DT + Y I + + D +S
Sbjct: 945 DDTLVGDQGNDSLDGGSGGETSGDVAQFSGDRSNYLILDNGGGTLRVVDRTGTYGDDTVS 1004
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+VE LRF D + + +I+ T + L G D +++ G D
Sbjct: 1005 NVETLRFGDGDVAVSGLTLGTIVTGTPGADSLDGTAGDDSIDALAGDDTVNGLAGNDSIN 1064
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
+ G ++ + + L +
Sbjct: 1065 GDEDADSISGGDGADIVNGDDGDDTLEGDAGTDSLFGGAGDDSVVGGSDDDTLYGDDGND 1124
Query: 460 PDLVQVGKDHFSNFGCEEG 478
G D+ + + G
Sbjct: 1125 TLEGGDGNDYSYDGNRDSG 1143
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 70/472 (14%), Positives = 130/472 (27%), Gaps = 47/472 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S+ + D G T++ + + + G
Sbjct: 14 PGSNSDDTINGLAGNDIINALDGNDSVEAGAGNDSVEGDAGNDTLIGDSGVDILHGGDGD 73
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G +YG D + + SY +DS D+ V D +
Sbjct: 74 DSIDGGTEGDTLYGDDGNDTILGGDGNDYSYDSNRDSGDDSIDMGAGDDTVYDAEGNNTV 133
Query: 195 YGAP-------------KGSLGNNI--YKIEVQQKDSPFIQTIYDSGGDDLLDLTL---I 236
G G G++ Y + T+ G+D + +
Sbjct: 134 LGGDGNDRLWYVSGESIDGGTGDDSIRYYNYHNDAVNARNVTVEGGDGNDTIQDSGSYDY 193
Query: 237 GGVKNYIDLNTES-------------------WSSIGGYEKNMTIAQHTVIESVVGSSGN 277
DL + S+ G N ++ T +++ G + +
Sbjct: 194 NNGNLSYDLRGGAGNDIVRGSSYGDTIDGGADDDSLAGNSGNDSMTGGTGDDTLSGGNDD 253
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSG----LDTFFYYAPSYLYKIYRFENAIIVYD--AN 331
D + G + +++ G+D+ DG SG D + Y I + A
Sbjct: 254 DTLEGEAGDDILQGDRGDDLLDGGSGGETNGDVAQFTGVRANYLILDNGGGTLRVVDRAG 313
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ D +S+VE LRF+D I + + TA + L G D + +
Sbjct: 314 TYGDDTVSNVETLRFSDGDIAVSGLALGAASAGTAGGDSLDGTSGDDSIDGLAGDDTING 373
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
G D D + GSD T G + A +
Sbjct: 374 LGGNDSLNGD----ADADSISGGDGSDIVNGGDGDDTLEGDAGTDSLFGGAGDDSVVGGT 429
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ + +++ + R DS D + + G++
Sbjct: 430 EDDTLYGDDGNDTLEGGDGNDYSYDSTRDTGDDSIDMGAGDDTVYDAEGNNT 481
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/342 (16%), Positives = 101/342 (29%), Gaps = 31/342 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D I + + T D+ D G T+ + + G
Sbjct: 1073 SGGDGADIVNGDDGDDTLEGDAGTDSLFGGAGDDSVVGGSDDDTLYGDDGNDTLEGGDGN 1132
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP---MVSDIVAV 191
+ N +D +D+ L + + D + D
Sbjct: 1133 DYSYDGNRDSGDDSIDMGAGDDTILDQEGNNTVLGGDGNDRLWYVSGESIDGGTGDDSIR 1192
Query: 192 QKIYGAPKGSLGNNIYKIEV-----------QQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
Y + N + + + G+D + + G
Sbjct: 1193 YYNYHNDAVNARNVTVEGGDGNDTIQDHGSYDYNNGNLSYDLRGGAGNDTVRGSSYGDTI 1252
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF----FESSGND 296
+ S+ G + TI T +S+ G++GND ++G +++F + +G+D
Sbjct: 1253 D----GGADDDSLAGNNGDDTIFGGTGDDSLEGNNGNDSLLGGDGDDIFHQNAYSGTGDD 1308
Query: 297 VFDGSSGL-------DTFFYYAPSYLYKIYRFENAIIVY--DANEHKQDFLSDVERLRFA 347
DG + D Y Y I + V N D + +VERLRFA
Sbjct: 1309 TIDGGADNSGSGSDGDVAVYRGNRGDYSIVGTATGLQVINLTGNGDGTDVVYNVERLRFA 1368
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D + N S++ + + L+ I D E
Sbjct: 1369 DGDVVVANGLTGSLVTGSPGDDSLVGTILNDTIEGYAGNDTI 1410
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 52/434 (11%), Positives = 106/434 (24%), Gaps = 23/434 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ N + + + D G + + G
Sbjct: 221 DGGADDDSLAGNSGNDSMTGGTGDDTLSGGNDDDTLEGEAGDDILQGDRGDDLLDGGSGG 280
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G V D+ ++ D +AV +
Sbjct: 281 ETNGDVAQFTGVRANYL--ILDNGGGTLRVVDRAGTYGDDTVSNVETLRFSDGDIAVSGL 338
Query: 195 YGAPKGSLGN-----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ + + TI GG+D +L G +
Sbjct: 339 ALGAASAGTAGGDSLDGTSGDDSIDGLAGDDTINGLGGND----SLNGDADADSISGGDG 394
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD-TFF 308
+ G + + T+ +S+ G +G+D V+G + ++ + GND +G G D ++
Sbjct: 395 SDIVNGGDGDDTLEGDAGTDSLFGGAGDDSVVGGTEDDTLYGDDGNDTLEGGDGNDYSYD 454
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ I VYDA + D + + Y +
Sbjct: 455 STRDTGDDSIDMGAGDDTVYDAEGNNTILGGDGNDRLWYVSGESIDGGTGDDSIRYYNYH 514
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
D + +G D DS Y + +L G +
Sbjct: 515 NDAVNAR----------NVTIEGGDGNDTIQDSGSYDYNNGNLSYDLRGGAGNDTVRGSS 564
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+G +L + ++ + + D ++ +
Sbjct: 565 YGDTID-GGADDDSLAGNSGNDSMTGGTGNDSMSGGNDDDTLEGGDGDDTLRGDNGNDSL 623
Query: 489 LGSYDDLRNVFGSD 502
LG G+
Sbjct: 624 LGGAGLDALYGGNG 637
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 53/492 (10%), Positives = 121/492 (24%), Gaps = 59/492 (11%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
+ + ++ + LS+D+
Sbjct: 853 NARNVTVEGGDGNDTIQDHGSYDYNNGNLSYDLRG------------------------- 887
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ Y T + + D G G ++ +
Sbjct: 888 -----GAGNDTVRGSSYGDTIDGGADDDSLAGNNGNDSMTGGTGNDSMSGGTGDDTLEGG 942
Query: 132 LG---LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
G L+ + G + + F +Y + + D
Sbjct: 943 DGDDTLVGDQGNDSLDGGSGGETSGDVAQFSGDRSNYLILDNGGGTLRVVDRTGTYGDDT 1002
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
V+ + G + + + +P ++ + GDD +D
Sbjct: 1003 VSNVETLRFGDGDVAVSGLTLGTIVTGTPGADSLDGTAGDDSIDAL-------------A 1049
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G N +I +S+ G G D+V G+ ++ +G D G +G D+
Sbjct: 1050 GDDTVNGLAGNDSINGDEDADSISGGDGADIVNGDDGDDTLEGDAGTDSLFGGAGDDSVV 1109
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
S +Y + + + + + + + +
Sbjct: 1110 --GGSDDDTLYGDDGNDTLEGGDGNDYSYDGNRDS-----GDDSIDMGAGDDTILDQEGN 1162
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
++ G D + G + I + +Y V G D + + +
Sbjct: 1163 NTVLGGDGNDRLWYVSGESIDGGTGDDSIRYYNYHNDAVNARNVTVEGGDGNDTIQDHGS 1222
Query: 429 HGVKEG------RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ G R + + + + D G D ++
Sbjct: 1223 YDYNNGNLSYDLRGGAGNDTVRGSSYGDTIDGGADDDSLAGNNGDDTIFGGTGDDSLEGN 1282
Query: 483 FDSYLYLGSYDD 494
+ LG D
Sbjct: 1283 NGNDSLLGGDGD 1294
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 56/456 (12%), Positives = 112/456 (24%), Gaps = 9/456 (1%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
TT+ + ++ + + N + V
Sbjct: 2921 TTDSFTYTISDGNGGTDTATVTVTIDGANDAPVYGDFGVTTNEDTGVVVPFETATDVDGD 2980
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + ++ N + F + V G T + + + +
Sbjct: 2981 SLTYSVQTGPTNGTATFNALGELIYTPAPDFFGSDSFTLLVDDGNGGTDTAVVNVTVDPV 3040
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
A + + G+D +NDS Y + + D
Sbjct: 3041 NDAPIAVDDSEFTVAGAPMGIDV-LDNDSDPDGDTLYIDSVTQGSNGTVTTDDNLTPGDP 3099
Query: 189 VAVQKIYGAPKGSLGNN--IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+Y G G + Y I + D + + GG +
Sbjct: 3100 SDDTVVYTPDAGFTGTDSFTYTIRDGNGGTATATVTMDVNATATGGVDVSGGSGSDGLTG 3159
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ +I G+ + I + V G SG D V GN ++ +G+D G +G DT
Sbjct: 3160 SDGDDTINGFGGDDIIFGGDGDDDVKGGSGEDSVKGNDGDDRILAGAGDDTVIGGAGDDT 3219
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
N ++ + + + +L
Sbjct: 3220 LA-GGGGNDLLNGNVGNDKLLGGTGDDSLFGGAGDDTASGGTGADVVRGNAGNDLLRGNG 3278
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGA 421
+ + D+ G D F D+ + D + G D
Sbjct: 3279 GNDTIFGGDDDDIVLGGSGDDLIKGQSGEDRLFGNAGNDTIIGGDGNDTIFGGAGDDLLV 3338
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
K G + + +A + A
Sbjct: 3339 GGFGSDEFRFKSGSTGASRISDFDMAQDQINAGGVA 3374
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 35/265 (13%), Positives = 70/265 (26%), Gaps = 18/265 (6%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I T + ++ G + TI + + GND V + N+ +GND G S
Sbjct: 3 IFTGTSNDDTLPGSNSDDTINGLAGNDIINALDGNDSVEAGAGNDSVEGDAGNDTLIGDS 62
Query: 303 GLDTFFYYAPSY-------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
G+D +Y + + + + + S+ +
Sbjct: 63 GVDILHGGDGDDSIDGGTEGDTLYGDDGNDTILGGDGNDYSYDSNRDS-----GDDSIDM 117
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ ++ G D + G + I + +Y V
Sbjct: 118 GAGDDTVYDAEGNNTVLGGDGNDRLWYVSGESIDGGTGDDSIRYYNYHNDAVNARNVTVE 177
Query: 416 GSDRGAAARHYITHGVKEG------RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
G D + ++ G R + + + + D G D
Sbjct: 178 GGDGNDTIQDSGSYDYNNGNLSYDLRGGAGNDIVRGSSYGDTIDGGADDDSLAGNSGNDS 237
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDD 494
+ ++ D G D
Sbjct: 238 MTGGTGDDTLSGGNDDDTLEGEAGD 262
Score = 41.7 bits (96), Expect = 0.41, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 5/136 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + G+DLL + T+ GG + I L I G +
Sbjct: 3252 GDDTASGGTGADVVRGNAGNDLLRGNGGNDTIFGGDDDDIVLGGSGDDLIKGQSGEDRLF 3311
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ ++++G GND + G + +++ G+D F SG + + +
Sbjct: 3312 GNAGNDTIIGGDGNDTIFGGAGDDLLVGGFGSDEFRFKSGSTGASRISDFDMAQDQINAG 3371
Query: 324 AIIVYDANEHKQDFLS 339
+ + D L
Sbjct: 3372 GVALASVVAVGSDALV 3387
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 39/274 (14%), Positives = 73/274 (26%), Gaps = 26/274 (9%)
Query: 224 DSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ DD L + G N I + S+ N ++ ++++G SG D
Sbjct: 6 GTSNDDTLPGSNSDDTINGLAGNDIINALDGNDSVEAGAGNDSVEGDAGNDTLIGDSGVD 65
Query: 279 VVIGNSAN---------NVFFESSGNDVFDGSSGLD-TFFYYAPSYLYKIYRFENAIIVY 328
++ G + + + GND G G D ++ S I VY
Sbjct: 66 ILHGGDGDDSIDGGTEGDTLYGDDGNDTILGGDGNDYSYDSNRDSGDDSIDMGAGDDTVY 125
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
DA + D + + Y + D +
Sbjct: 126 DAEGNNTVLGGDGNDRLWYVSGESIDGGTGDDSIRYYNYHNDAVNAR----------NVT 175
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+G D DS Y + +L G ++G +L +
Sbjct: 176 VEGGDGNDTIQDSGSYDYNNGNLSYDLRGGAGNDIVRGSSYGDTID-GGADDDSLAGNSG 234
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
++ + D D ++
Sbjct: 235 NDSMTGGTGDDTLSGGNDDDTLEGEAGDDILQGD 268
>gi|188580021|ref|YP_001923466.1| hypothetical protein Mpop_0753 [Methylobacterium populi BJ001]
gi|179343519|gb|ACB78931.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 294
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 40/138 (28%), Gaps = 22/138 (15%)
Query: 478 GRFVT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHED 535
GR FD+ Y + HY G + RNP F Y
Sbjct: 23 GRVPKLFDAAFYRERNPGVARSGLD----PFLHYAWFGARRDRNPSADFDTAFYRRQSG- 77
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
H+ G +G S F+ LYL Y D+ H
Sbjct: 78 ---------RTRLDPLRHYLKVGAAQGLDPSPAFSTSLYLARYPDVVAA----GINPLLH 124
Query: 594 YITHGMKEGRALGISGMQ 611
+ T G EGR S ++
Sbjct: 125 FRTDGRAEGREAAPSPIE 142
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 50/133 (37%), Gaps = 24/133 (18%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGS 491
GR P F A Y + + + D H++ FG R FD+ Y
Sbjct: 23 GRVPKLFDAAFYRERNPGVARSGLDPFL-------HYAWFGARRDRNPSADFDTAFY--- 72
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAG 550
R G R RHY+ G +G +P AF Y+A + D++ A P L
Sbjct: 73 ----RRQSGRTRLDPLRHYLKVGAAQGLDPSPAFSTSLYLARYPDVVAA-GINPLL---- 123
Query: 551 KDHFSNFGYEEGR 563
HF G EGR
Sbjct: 124 --HFRTDGRAEGR 134
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 45/137 (32%), Gaps = 25/137 (18%)
Query: 385 HFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FK 441
H+ FG R+ FD+ Y G R RHY+ G +G +P F
Sbjct: 51 HYAWFGARRDRNPSADFDTAFYRRQS-------GRTRLDPLRHYLKVGAAQGLDPSPAFS 103
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
Y+A + D++ A + HF G EGR D
Sbjct: 104 TSLYLARYPDVVAAGINPLL-------HFRTDGRAEGREAAPSPIE-----PDRLRA--- 148
Query: 502 DRGAAARHYITHGVKEG 518
G A H +T EG
Sbjct: 149 LDGVAEEHLLTLPEAEG 165
>gi|325197798|gb|ADY93254.1| Iron-regulated protein frpC [Neisseria meningitidis G2136]
Length = 1210
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 83/550 (15%), Positives = 147/550 (26%), Gaps = 83/550 (15%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D+ + + D G G + +N + A G H +G + G +
Sbjct: 614 NGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGAEGNDHLNGEDGNDTLIGGAGN 673
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-----GSLGN--- 204
+ S +Y + D + Y DI ++ G GN
Sbjct: 674 DYLEGGSGSD-TYVFGKGFGQDTVYNYDYATGRKDI--IRFTDGITADMLTFTREGNHLL 730
Query: 205 ------------NIYKIEVQQKDSPFIQTIYDSG-----------------GDDLLDLTL 235
Y + +D+G G D L
Sbjct: 731 IKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQ 790
Query: 236 IGGV-----KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
G + + + G N +I +++ G GND + G + N+V
Sbjct: 791 SGNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLN 850
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ GND +G G DT + + + QD + + +
Sbjct: 851 GAEGNDHLNGEDGNDTLI--GGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDI 908
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
I + +L +T L+ D +F G +Y +
Sbjct: 909 IRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSG--------AYRIDEIH 960
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
D V T G + L + L A D G
Sbjct: 961 FDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLNGDAG-- 1018
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
+ +Y G+ +D + + Y +G + L
Sbjct: 1019 ---------------NDSIYSGNGNDTLDGGEGNDAL----YGYNGNDALNGGEGNDHLN 1059
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRS 588
++ LI + +G D + FG G+ +N ++ D + G
Sbjct: 1060 GEDGNDTLIGGAGNDYLEGGSGSDTYV-FGKGFGQDTVYN--YHVDKNSDTMHFKG--FK 1114
Query: 589 AAAQHYITHG 598
AA H+I G
Sbjct: 1115 AADVHFIRSG 1124
Score = 80.6 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 58/447 (12%), Positives = 119/447 (26%), Gaps = 48/447 (10%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 446 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 505
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 506 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 565
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 566 VLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 621
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + + + G+ GND + G N+ +GND +G SG
Sbjct: 622 IYSGNGNDTLDGGEGNDALYGYNGNDVLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 681
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 682 SDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 741
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
V ++ ++ + F + + V ++ + + T + L +
Sbjct: 742 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGD 801
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
++G D+ Y N Y +G + L
Sbjct: 802 DYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGAEGNDHLNGE 861
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNF 473
++ LI + G D +
Sbjct: 862 DGNDTLIGGAGNDYLEGGSGSDTYVFG 888
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/260 (17%), Positives = 81/260 (31%), Gaps = 20/260 (7%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS-----HNALHEIGHAL 132
+ + + + I D G G T + + ++ +A
Sbjct: 844 NGNDVLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYAT 903
Query: 133 GLMHPGSYNGGYPVYGVDND---------YENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
G + G + ++DS +V SYF S
Sbjct: 904 GRKDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDN 963
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 964 GKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGN 1019
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ ++ G E N + + +++ G GND + G N+ +GND +G
Sbjct: 1020 DSIYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGG 1079
Query: 302 SGLDTFFYYAPSYLYKIYRF 321
SG DT+ + +Y +
Sbjct: 1080 SGSDTYVFGKGFGQDTVYNY 1099
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 53/418 (12%), Positives = 102/418 (24%), Gaps = 80/418 (19%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
++ + T + +D + +G G G +N + G +
Sbjct: 651 GAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 710
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-----IVA 190
+ + ++ + D S Y + D VA
Sbjct: 711 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 770
Query: 191 VQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
K + +Y + +Y + GDDLL+ G N +
Sbjct: 771 TVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDSIYSGN 826
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL---- 304
++ G E N + + + + G+ GND + G N+ +GND +G SG
Sbjct: 827 GNDTLDGGEGNDALYGYNGNDVLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV 886
Query: 305 --------------------DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----- 339
D + + + + ++
Sbjct: 887 FGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYF 946
Query: 340 --------DVERLRFADQCIDSV---------------------------NVKQRSILEY 364
++ + F + + V L
Sbjct: 947 QNDGSGAYRIDEIHFDNGKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYG 1006
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L G D S EG D LY + +D N +
Sbjct: 1007 ADGDDLLNGDAGNDSIYSGNGNDTLDGGEGND-----ALYGYNGNDALNGGEGNDHLN 1059
>gi|126740151|ref|ZP_01755840.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
gi|126718606|gb|EBA15319.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
Length = 702
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 63/247 (25%), Gaps = 10/247 (4%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G + G + + +S+ G SG D + G+ N+ +G+
Sbjct: 401 FGLGGADTIAGEAGDDRLDGGAGADLLNGGSGNDSLFGGSGRDSLRGDIGNDSLTGGTGD 460
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G G D F + L +Y + + V+ +
Sbjct: 461 DTLYGGDGDDRLF--GNTSLDTLYGGAGNDYISAGD--------GVDFVNGDAGNDTIHG 510
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+L + + G D D+ F + Y + +
Sbjct: 511 RSGWDLLNGNDGNDSIYGSQGDDTLNGGGDDDWLSGGSAWDVLFGNDGNDTLYGNFGSDV 570
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
S + + G R D L+ + L D +D F
Sbjct: 571 QSGGAGNDQLFGGTGDDSLRGGDGNDTLQGNQGVDRLDGGAGDDLLRGGTLRDTFVFNTG 630
Query: 476 EEGRFVT 482
+ +
Sbjct: 631 YDNDEIN 637
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 72/276 (26%), Gaps = 17/276 (6%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
S D R IG ++ + G
Sbjct: 419 DGGAGADLLNGGSGNDSLFGGSGRDSLRGDIGNDSLTGGTGDDTLYGGDGDDRLFGNTSL 478
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+YG ND F+ D+ D G +++ IYG+
Sbjct: 479 DTLYGG---AGNDYISAGDGVDFVNGDAGNDTIHGRSGWDLLNGNDGNDSIYGSQGDDTL 535
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
N + ++ + G+D L G N +
Sbjct: 536 NGG-GDDDWLSGGSAWDVLFGNDGNDTLY-------------GNFGSDVQSGGAGNDQLF 581
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T +S+ G GND + GN + +G+D+ G + DTF + +I FE
Sbjct: 582 GGTGDDSLRGGDGNDTLQGNQGVDRLDGGAGDDLLRGGTLRDTFVFNTGYDNDEINDFEE 641
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+ + + + + V
Sbjct: 642 HRDFLLLSTSLTGGETSAANILSTYGSVVNGQVVFD 677
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/250 (14%), Positives = 64/250 (25%), Gaps = 19/250 (7%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ L G + + G E++ ++ + + G G D + G + ++
Sbjct: 359 AIWLNGDQGDRGFTLFTAALNQGTEGTEQSEALSGSANADYLFGLGGADTIAGEAGDDRL 418
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G D+ +G SG D+ F S + + L D
Sbjct: 419 DGGAGADLLNGGSGNDSLF--GGSGRDSLRGDIGNDSLTGGTGDDT--------LYGGDG 468
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----TFDSYLYL 405
L A + + G D G D+ + +Y
Sbjct: 469 DDRLFGNTSLDTLYGGAGNDYISAGDGVDFVNGDAGNDTIHGRSGWDLLNGNDGNDSIYG 528
Query: 406 GSYDDLRNVFGSD-----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
DD N G D A + G A ++ L D
Sbjct: 529 SQGDDTLNGGGDDDWLSGGSAWDVLFGNDGNDTLYGNFGSDVQSGGAGNDQLFGGTGDDS 588
Query: 461 DLVQVGKDHF 470
G D
Sbjct: 589 LRGGDGNDTL 598
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 55/284 (19%), Gaps = 67/284 (23%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E++ GS+ D + G + +G+D DG +G D +
Sbjct: 389 EALSGSANADYLFGLGGADTIAGEAGDDRLDGGAGADLL-------------NGGSGNDS 435
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+D L L + L D
Sbjct: 436 LFGGSGRDSLRG------DIGNDSLTGGTGDDTLYGGDGDDRLFGNTSLDTLYGGAGNDY 489
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+G D + A + N + Y +
Sbjct: 490 ISAGDGVDF-------------------VNGDAGNDTIHGRSGWDLLNGNDGNDSIYGSQ 530
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+D +N D L FG+D
Sbjct: 531 GDDTLNGGGDDDWLSGGSAWDVL---------------------------FGNDGNDTL- 562
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
Y G L + L + G D
Sbjct: 563 -YGNFGSDVQSGGAGNDQLFGGTGDDSLRGGDGNDTLQGNQGVD 605
>gi|291569921|dbj|BAI92193.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 1474
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 52/173 (30%), Gaps = 10/173 (5%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I + T + G ++ I ++++G GND + NN+ F G+D G
Sbjct: 4 IIIGTSESDLLLGTSEDDEIQGLEGDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFGGP 63
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT F IY E + + + + L
Sbjct: 64 GNDTLF--GELGDDVIYGGEGNNFILGNSGDD--------SIVGGSGNDTIYGGQGSDTL 113
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ L G D+ + F G D+ + G D+ F
Sbjct: 114 IGGEGDDLLFGDRGNDILYTGSGFNSLTGGAGSDLFVIGVGFNGGQTDVITDF 166
Score = 80.6 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 48/165 (29%), Gaps = 10/165 (6%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G ++ + L T I G E + T+ +++ GN+++ G ++ F GND
Sbjct: 7 GTSESDLLLGTSEDDEIQGLEGDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFGGPGND 66
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G G D Y I + + + + +
Sbjct: 67 TLFGELGDD--VIYGGEGNNFILGNSGDDSIVGGSGNDT--------IYGGQGSDTLIGG 116
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ +L + L G + F + G +
Sbjct: 117 EGDDLLFGDRGNDILYTGSGFNSLTGGAGSDLFVIGVGFNGGQTD 161
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 64/194 (32%), Gaps = 14/194 (7%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ T++ G++LL D L GG N I G E N I
Sbjct: 28 GDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFGGPGNDTLFGELGDDVIYGGEGNNFIL 87
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++ +S+VG SGND + G ++ G+D+ G G D + + +
Sbjct: 88 GNSGDDSIVGGSGNDTIYGGQGSDTLIGGEGDDLLFGDRGNDILYTGSGFNSLTGGAGSD 147
Query: 324 AIIVYDANEHK-----QDFLSDVERLRFADQ----CIDSVNVKQRSILEYTASYEDLIQV 374
++ DF + + A+ ++ +++ + E L+ +
Sbjct: 148 LFVIGVGFNGGQTDVITDFRPGFDLIGLANGLEFADLEIAQQGNDTLIRDRQTRERLVLL 207
Query: 375 IGQDVFESMKHFYE 388
D +
Sbjct: 208 EATDSTILNSGNFT 221
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 53/179 (29%), Gaps = 41/179 (22%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + + T+ G+D L E + + G + + +
Sbjct: 18 SEDDEIQGLEGDDTLLGFQGNDTL-------------FAGEGNNLLFGGQGDDYLFGGPG 64
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G G+DV+ G NN +SG+D G SG DT +
Sbjct: 65 NDTLFGELGDDVIYGGEGNNFILGNSGDDSIVGGSGNDTIY------------------- 105
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D L E + IL + + L G D+F F
Sbjct: 106 ---GGQGSDTLIGGE------GDDLLFGDRGNDILYTGSGFNSLTGGAGSDLFVIGVGF 155
Score = 45.2 bits (105), Expect = 0.042, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 33/149 (22%), Gaps = 9/149 (6%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF--- 399
L + + ++ L + L G ++ + G D F
Sbjct: 13 LLLGTSEDDEIQGLEGDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFGGPGNDTLFGEL 72
Query: 400 -DSYLYLGSYDDLRNVFGSD-----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
D +Y G ++ D Y G + L ++ L
Sbjct: 73 GDDVIYGGEGNNFILGNSGDDSIVGGSGNDTIYGGQGSDTLIGGEGDDLLFGDRGNDILY 132
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
G D F G
Sbjct: 133 TGSGFNSLTGGAGSDLFVIGVGFNGGQTD 161
Score = 40.5 bits (93), Expect = 0.94, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 30/142 (21%)
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
V + + + + ++ + L+ G D + + +G D F
Sbjct: 2 VNIIIGTSESDLLLGTSEDDEIQGLEGDDTLLGFQGNDTLFAGEGNNLLFGGQGDDYLFG 61
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+ +L + G + + LI D
Sbjct: 62 GPGNDTLFGELGDDVIYGGEGNNFILGNSGDDSIVGGSGNDTIYGGQGSDTLIGGEGDDL 121
Query: 461 DLVQVGKDHFSNFGCEEGRFVT 482
G D
Sbjct: 122 LFGDRGNDILYTGSGFNSLTGG 143
>gi|254415379|ref|ZP_05029140.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196177854|gb|EDX72857.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 877
Score = 81.4 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 59/458 (12%), Positives = 111/458 (24%), Gaps = 16/458 (3%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWA--LGEWSKVVD--LTFEETSIHSDI 79
+ F + + + + + A L +S V L+ +
Sbjct: 371 TQNFTVTPVNDAPVGSPTITLGDTSEETAVTINGADLLAGFSDVEGDTLSVVGLTADGGT 430
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
+ + + P + F+ + D Y + G + A +I
Sbjct: 431 VVDNGDGTFTYDPTGNFD-FLGVGATTTDTLSYTVSDGNGGTTTATVDITVT-------G 482
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
N + D+ ++ D T + + +
Sbjct: 483 INDAPVAKDDNRTAFKDTPISFRPLNNDSDADDGDTLSLTNITNITNGTLTEDNGLVTFT 542
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G T + ++ D + + ID I G +
Sbjct: 543 PDAGFTGTGSFDYTITDSQGVTDTATVTIEVGDNFQGTDLNDTIDGTPG-NDRINGGNGS 601
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ +S+ G +G++ + G ++ SG D +G SG D F +
Sbjct: 602 DTLNGGNGNDSIDGGNGDNQLFGGGGSDTLTGGSGRDTLNGGSGSD--FLDGGDGDNILD 659
Query: 320 RFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ N + + L D + L S + G D
Sbjct: 660 GGNGRDTLIGGNSRDTLIGGNGNDFLDGGDGENTLDGGDGQDTLTGGNSRDTFTGGDGND 719
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ EG D L N R Y G +
Sbjct: 720 SLDGGGGEDALDGGEGNDTLLGGQGQDTLTGGLGNDSLDGGEGDDRLYGDAGNDTLIGGN 779
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
L + L F + +G D F E
Sbjct: 780 GQDQLVGGDGDDLLSGGFGNDQLTGGLGMDTFVLTAGE 817
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 59/420 (14%), Positives = 104/420 (24%), Gaps = 17/420 (4%)
Query: 3 NIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHR-LSFDITELNPNAQEVARWALGE 61
+ Y D L ++ D + DIT N VA+
Sbjct: 436 DGTFTYDPTGNFDFLGVGATTTDTLSYTVSDGNGGTTTATVDITVTGINDAPVAKDDNRT 495
Query: 62 WSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
K ++F + SD + E N G
Sbjct: 496 AFKDTPISFRPLNNDSDAD-DGDTLSLTNITNITNGTLTEDNGLVTFTPDAGFTGTGSFD 554
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
+ G + +++ + + ++ D++ +
Sbjct: 555 YTITDSQGVTDTATVTIEVGDNFQGTDLNDTIDG-TPGNDRINGGNGSDTLNGGNGNDSI 613
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
D Q G +L + GD++LD GG
Sbjct: 614 DGGNGD---NQLFGGGGSDTLTGG--SGRDTLNGGSGSDFLDGGDGDNILD----GGNGR 664
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ S ++ G N + ++ G G D + G ++ + F GND DG
Sbjct: 665 DTLIGGNSRDTLIGGNGNDFLDGGDGENTLDGGDGQDTLTGGNSRDTFTGGDGNDSLDGG 724
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
G D + + + D +RL + +
Sbjct: 725 GGEDAL--DGGEGNDTLLGGQGQDTLTGGLGNDSLDGGEGDDRLYGDAGNDTLIGGNGQD 782
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEF--GLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
L + L G D F E +D+ D L G L N +
Sbjct: 783 QLVGGDGDDLLSGGFGNDQLTGGLGMDTFVLTAGENQDMIQDFSLGEGDKLGLTNGVTFN 842
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 57/347 (16%), Positives = 96/347 (27%), Gaps = 20/347 (5%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFIS 83
N + + PD T SFD T + E F+ +D+
Sbjct: 535 DNGLVTFTPDAGFTGTGSFDYTITDSQGVTDTATVTIEVGD----NFQ----GTDLNDTI 586
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ + D G G + + G +G
Sbjct: 587 DGTPGNDRINGGNGSDTLNGGNGNDSIDGGNGDNQLFGGGGSDTLTGGSGRDTLNGGSGS 646
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ G D D D + G + G + G
Sbjct: 647 DFLDGGDGDNILDGGNGRDTLIGGNSRDTLIGGNGNDFLDGGDGENTLDGGDGQDTLTGG 706
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEK 258
N+ ++ GG+D LD TL+GG S+ G E
Sbjct: 707 NSRDTF----TGGDGNDSLDGGGGEDALDGGEGNDTLLGGQGQDTLTGGLGNDSLDGGEG 762
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + ++++G +G D ++G +++ GND G G+DTF A I
Sbjct: 763 DDRLYGDAGNDTLIGGNGQDQLVGGDGDDLLSGGFGNDQLTGGLGMDTFVLTAGENQDMI 822
Query: 319 YRFENAIIVYDANEHKQ---DFLSDVERLRFADQCIDSVNVKQRSIL 362
F + D +R+ Q + +N S L
Sbjct: 823 QDFSLGEGDKLGLTNGVTFNDLFFQGNEIRYNGQTLAMLNGINTSTL 869
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 41/332 (12%), Positives = 80/332 (24%), Gaps = 63/332 (18%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE---SVVGSSGNDVVI 281
+ G D L+ + T S+ + +T IE + G+ ND +
Sbjct: 528 TNGTLTEDNGLVTFTPDAGFTGTGSFDYTITDSQGVTDTATVTIEVGDNFQGTDLNDTID 587
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSD 340
G N+ +G+D +G +G D+ + +++ + + + + S
Sbjct: 588 GTPGNDRINGGNGSDTLNGGNGNDSI--DGGNGDNQLFGGGGSDTLTGGSGRDTLNGGSG 645
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ L D R L S + LI G D + +G+D
Sbjct: 646 SDFLDGGDGDNILDGGNGRDTLIGGNSRDTLIGGNGNDFLDGGDGENTLDGGDGQDTL-- 703
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
++ ++ L +
Sbjct: 704 ----------------------------------TGGNSRDTFTGGDGNDSLDGGGGEDA 729
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
G D ++ + G D R +
Sbjct: 730 LDGGEGNDTLLGGQGQDTLTGGLGNDSLDGGEGDDRLYGDA------------------- 770
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L + L+ D G D
Sbjct: 771 --GNDTLIGGNGQDQLVGGDGDDLLSGGFGND 800
>gi|220920327|ref|YP_002495628.1| hypothetical protein Mnod_0281 [Methylobacterium nodulans ORS 2060]
gi|219944933|gb|ACL55325.1| protein of unknown function DUF839 [Methylobacterium nodulans ORS
2060]
Length = 686
Score = 81.0 bits (198), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 66/204 (32%), Gaps = 24/204 (11%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+TI + G+D +L+G + + +I G + ++ +S+ G +GND
Sbjct: 464 RTINGTAGND----SLVGSQIADLIWGNDGDDTIRGAAGDDYLSGLAGNDSIDGGAGNDT 519
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G++ ++ G+DV G G DT F ++ + + D++S
Sbjct: 520 LFGDAGDDRVDGGEGDDVVRGWYGNDTLF--GSGGNDAVFGEDG--HDFIGAGSGNDYVS 575
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
L A + L G D FG G
Sbjct: 576 G---------------GAGNDALYGEAGNDLLFGNAGNDELVGGTGSDTFGFGRGDGQDL 620
Query: 400 -DSYLYLGSYDDLRNVFGSDRGAA 422
+ G+ D+ G +
Sbjct: 621 IRDFTVGGAERDVIAFNGGAFASF 644
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 10/164 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
T++ GDD +D + G N + ++ G + + I
Sbjct: 507 GNDSIDGGAGNDTLFGDAGDDRVDGGEGDDVVRGWYGNDTLFGSGGNDAVFGEDGHDFIG 566
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + V G +GND + G + N++ F ++GND G +G DTF + I F
Sbjct: 567 AGSGNDYVSGGAGNDALYGEAGNDLLFGNAGNDELVGGTGSDTFGFGRGDGQDLIRDFT- 625
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
E + FA + V +++ Y A
Sbjct: 626 ----VGGAERDVIAFNGGAFASFAAVQAATQQVGADAVISYGAG 665
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 44/190 (23%), Gaps = 37/190 (19%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+ + G + N+ S D+ G+ G DT
Sbjct: 463 DRTINGTAGNDSLVGSQIADLIWGNDGDDT------------------------------ 492
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+R A + ++ A + L G D + + G D
Sbjct: 493 -------IRGAAGDDYLSGLAGNDSIDGGAGNDTLFGDAGDDRVDGGEGDDVVRGWYGND 545
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
F S + + + F G L A +++L+
Sbjct: 546 TLFGSGGNDAVFGEDGHDFIGAGSGNDYVSGGAGNDALYGEAGNDLLFGNAGNDELVGGT 605
Query: 457 ADAPDLVQVG 466
G
Sbjct: 606 GSDTFGFGRG 615
>gi|113477607|ref|YP_723668.1| hemolysin-type calcium-binding protein [Trichodesmium erythraeum
IMS101]
gi|110168655|gb|ABG53195.1| Hemolysin-type calcium-binding region [Trichodesmium erythraeum
IMS101]
Length = 982
Score = 81.0 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 49/341 (14%), Positives = 102/341 (29%), Gaps = 30/341 (8%)
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI------YKIE 210
+ L + + +++ + ++ TP+ ++ V K +I Y
Sbjct: 524 NILNTNLLVTDTDNTIEEITYNLIRTPIQGNLRLVNKRLNQNDTFSQADINNNLILYTPG 583
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ PF ++ D G + + V + I ++I G +++ + ++ ++
Sbjct: 584 NTAGNFPFFFSVSDGDGGSIASTSFSIRVVDNIIERGNGNNNINGTQESDYLIGNSGNDT 643
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +G+D++ G + ++ +GND G DT F + + +
Sbjct: 644 LSGGNGDDILDGGAGEDILLGEAGNDSLFGGEETDTLF--GGIGDDTLDGGADNDSLLGQ 701
Query: 331 NEHKQDFLSDVER---LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D L E+ L L + L+ +G D
Sbjct: 702 G--GNDLLLGAEQQDTLEGGLGDDTLDGGTDNDSLSGGDDNDSLLGNLGNDTLRGDSGND 759
Query: 388 EFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
D D L+ GS D + + + + ++
Sbjct: 760 TINGGADSDSILGGIGDDSLFGGSGSDTLDGNEGNDFLS-------------GTEGNDSI 806
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ L F G D F EG V D
Sbjct: 807 NGSLGDDILNGGFGSDRLTGNQGADSFFFEVPNEGVDVITD 847
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 63/196 (32%), Gaps = 18/196 (9%)
Query: 202 LGNNIYK---IEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSI 253
G++ + + G+D LD L GG I L +
Sbjct: 43 SGDDTVFALDENDSLLGGEGQDYMNGNAGNDFLDGGLGNDCLRGGKGLDIFLGNSGSDIL 102
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G +N TI + +S+ G ND +IG +++ F GNDV +G G DT
Sbjct: 103 FGDRENDTILGNEGDDSIFGGKDNDSIIGGGEDDLLFGDRGNDVVNGDIGNDTIV--GGV 160
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
++ + ++ E +D L K LE + L
Sbjct: 161 GDDRLLGNDGGDTLF--GETGRDILEG------NAGDDVLFGGKDADSLEGGVGADFLSG 212
Query: 374 VIGQDVFESMKHFYEF 389
IG+D F
Sbjct: 213 DIGKDTLTGGIGQDTF 228
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/270 (16%), Positives = 75/270 (27%), Gaps = 22/270 (8%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
++ G + + + I + T+ +S++G G D + GN+ N+
Sbjct: 17 IESLGEGTPLSDSIIGSSRSDLIRALSGDDTVFALDENDSLLGGEGQDYMNGNAGNDFLD 76
Query: 291 ESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
GND G GLD F + I E ++ ++ +
Sbjct: 77 GGLGNDCLRGGKGLDIFLGNSGSDILFGDRENDTILGNEGDDSIFGGKDNDSIIGGGEDD 136
Query: 344 LRFADQCIDSVNV-KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF--- 399
L F D+ D VN + + L+ G D + G D+ F
Sbjct: 137 LLFGDRGNDVVNGDIGNDTIVGGVGDDRLLGNDGGDTLFGETGRDILEGNAGDDVLFGGK 196
Query: 400 -----------DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
D D L G D + + GV F + I
Sbjct: 197 DADSLEGGVGADFLSGDIGKDTLTGGIGQDTFNLEPNSESPGVSGADFISDFSNEDLINL 256
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
L + + + G G
Sbjct: 257 SNGLTFEDLSIFPSEENPDNTIISVGGTNG 286
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/340 (14%), Positives = 101/340 (29%), Gaps = 57/340 (16%)
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ TF + I++++ + N P + S + + + + I
Sbjct: 565 NDTFSQADINNNLILYTPGNTAGNFPFFFSVSDGDGGSIASTSFSIRVVDNII------- 617
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
G ++ E+D + + + + + D G ++
Sbjct: 618 --------------ERGNGNNNINGTQESDYLIGNSGNDTLSGGNGDDILDGGAGEDILL 663
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++G + T+ +D +L+G N + L
Sbjct: 664 GEAGNDSLFGGEET----------DTLFGGIGDDTLDGGADND----SLLGQGGNDLLLG 709
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
E ++ G + T+ T +S+ G ND ++GN N+ SGND +G + D+
Sbjct: 710 AEQQDTLEGGLGDDTLDGGTDNDSLSGGDDNDSLLGNLGNDTLRGDSGNDTINGGADSDS 769
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
++ + + DFLS E + +
Sbjct: 770 IL--GGIGDDSLFGGSGSDTL--DGNEGNDFLSGTE---------------GNDSINGSL 810
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGL---SEGRDITFDSYL 403
+ L G D + F +EG D+ D
Sbjct: 811 GDDILNGGFGSDRLTGNQGADSFFFEVPNEGVDVITDFNG 850
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 49/219 (22%), Gaps = 12/219 (5%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
L IL+ A + L+ G D + G D
Sbjct: 635 LIGNSGNDTLSGGNGDDILDGGAGEDILLGEAGNDSLFGGEETDTLFGGIGDDTL----D 690
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
D L G+D A L+ ++ L + L
Sbjct: 691 GGADNDSLLGQGGNDLLLGAEQ-----QDTLEGGLGDDTLDGGTDNDSLSGGDDNDSLLG 745
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
+G D + DS LG D GS G +
Sbjct: 746 NLGNDTLRGDSGNDTINGGADSDSILGGIGDDSLFGGSGSDTLD---GNEGNDFLSGTEG 802
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
++ + L F G D F EG
Sbjct: 803 NDSINGSLGDDILNGGFGSDRLTGNQGADSFFFEVPNEG 841
>gi|90417986|ref|ZP_01225898.1| putative hemolysin-type calcium-binding peroxidase protein
[Aurantimonas manganoxydans SI85-9A1]
gi|90337658|gb|EAS51309.1| putative hemolysin-type calcium-binding peroxidase protein
[Aurantimonas manganoxydans SI85-9A1]
Length = 3297
Score = 81.0 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 66/210 (31%), Gaps = 22/210 (10%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF------- 298
N ++ TI +++ G SGND + G + ++ G+D+
Sbjct: 1852 NPSFGTAFVSQNGQDTITGGAGDDTIQGLSGNDTLNGGAGDDDLLGHGGDDILVGGAGSD 1911
Query: 299 --DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+G +G DT + + + A + D L D+E++ F+D I +
Sbjct: 1912 IINGGAGNDTAVLDFTVADATFFLTPSGSLEIAAGADE-DELIDIEQVEFSDGQILTTRQ 1970
Query: 357 KQRSILEYTAS-------YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ I + DL V+ D + +GRD+
Sbjct: 1971 AENRIANFQRGNGQDNIINGDLDGVVADDTIRGLNGNDTISGGDGRDLLLGDGGSDTLNG 2030
Query: 410 D-----LRNVFGSDRGAAARHYITHGVKEG 434
D L G+D T G
Sbjct: 2031 DEDDDILAGGRGNDTVNGGAGDDTVFWFTG 2060
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 54/301 (17%), Positives = 101/301 (33%), Gaps = 32/301 (10%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN 103
T+ N + V A S DLT I+ D+ F+ +++ + S ++
Sbjct: 1806 FTDANGVRETVVSAASAPLSPATDLT----DINGDLVFVGTHSIDMTMAGNPSFGTAFVS 1861
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALG----LMHPGSY--NGGYPVYGVDNDYENDS 157
+ D G G TI + + G L H G GG ++ ND+
Sbjct: 1862 QNGQDTITGGAGDDTIQGLSGNDTLNGGAGDDDLLGHGGDDILVGGAGSDIINGGAGNDT 1921
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATP---MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK 214
+ S A + DI V+ G +Q
Sbjct: 1922 AVLDFTVADATFFLTPSGSLEIAAGADEDELIDIEQVEFSDGQILT----------TRQA 1971
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
++ +G D++++ L G V + +I G N TI+ + ++G
Sbjct: 1972 ENRIANFQRGNGQDNIINGDLDGVV---------ADDTIRGLNGNDTISGGDGRDLLLGD 2022
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D + G+ +++ GND +G +G DT F++ + + +
Sbjct: 2023 GGSDTLNGDEDDDILAGGRGNDTVNGGAGDDTVFWFTGDGRDSVNGGGGTDTLSINGDEG 2082
Query: 335 Q 335
Sbjct: 2083 V 2083
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 85/275 (30%), Gaps = 23/275 (8%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ GDD++ +GG + + I G I + V+G
Sbjct: 3022 GGAEADVLSGGDGDDII----LGGFGDDTLMGGSGSDLIKGDAGRDMIFGGAGDDVVLGG 3077
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+ ND++ G++ ++ F G+D+ +G G DT + + + + +
Sbjct: 3078 ADNDMIFGDAGDDRMFGDDGDDMLEGGGGFDTVY--GGAGNDRFIARQGDGDDIYWGDAG 3135
Query: 335 QDFL-----SDVERLRFADQCIDSV----NVKQRSILE------YTASYEDLIQVIGQDV 379
D L + + + + + + A +++ +V
Sbjct: 3136 NDTLDYAAITANLTIDLGNGTMQHGSVHSSQSGHDAIFGFENVIGGAGNDEITASSVVNV 3195
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYD--DLRNVFGSDRGAAARHYITHGVKEGRNP 437
+ F D D S D DL + GS+ +T +
Sbjct: 3196 MDGGGGNDTFVFRTAADADGDRINGFASGDKIDLSGMNGSEGFTLETTVLTGAGQVLVTH 3255
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
E + + ++ A+A ++V H +
Sbjct: 3256 LTGDDGEALTRIQGTVSDGAEADFTLEVAGRHLTQ 3290
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 66/195 (33%), Gaps = 6/195 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ Q I D + + +G + Y S+ G E ++ + + +
Sbjct: 1186 DADGNVLRTGQAIVDGPATNETVIDPVGLAQAY---TPGSYLRFTGGE-HVVLGGTSGND 1241
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+++GS G+D + G++ ++ G D+ G SG D S + + +I
Sbjct: 1242 TLIGSFGDDGIWGDAGDDFIQGGQGVDLILGGSGDDVILDDGDSGNFIKGEDGDDVIANS 1301
Query: 330 ANEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
A + + F V + + + L+ G D E F
Sbjct: 1302 AGPFDILMGGRGKDVIFVGPDDTEVFGGEGDDFIAGGEGVDFLLGNEGDDWIEGGGGFDT 1361
Query: 389 FGLSEGRDITFDSYL 403
+ D+ FDS +
Sbjct: 1362 -TAGDNSDLFFDSKI 1375
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 37/254 (14%), Positives = 66/254 (25%), Gaps = 34/254 (13%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL----------------DLTLIGGVKNYIDLNTESWSS 252
+ + + I GDD++ D+ I +
Sbjct: 1257 GDDFIQGGQGVDLILGGSGDDVILDDGDSGNFIKGEDGDDVIANSAGPFDILMGGRGKDV 1316
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS----------- 301
I + + + + G G D ++GN ++ G D G
Sbjct: 1317 IFVGPDDTEVFGGEGDDFIAGGEGVDFLLGNEGDDWIEGGGGFDTTAGDNSDLFFDSKIL 1376
Query: 302 ------SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+G D + A S + + E+ + +AD I
Sbjct: 1377 GHDVMFAGNDEHDFDAESGDDIMVQGESVMRNEGMFGFDWATFQGNSLDAYADMRIKIFT 1436
Query: 356 VKQRSIL-EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+Q+ IL E L G D EG + + D +
Sbjct: 1437 TEQQDILRNRFDKVEALSGWNGNDQLFGDDRENPINAEEGVGGDTVAANENILFHDGLSQ 1496
Query: 415 FGSDRGAAARHYIT 428
G DR R ++
Sbjct: 1497 AGVDRIRNLREFLD 1510
>gi|150376202|ref|YP_001312798.1| hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
gi|150030749|gb|ABR62865.1| Hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
Length = 1072
Score = 81.0 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 55/345 (15%), Positives = 92/345 (26%), Gaps = 6/345 (1%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + I G D D + + T+A +
Sbjct: 27 GDDLLQGLGGADIINGGAGVDTADYREKAAPIVVTLTGATAATVFINGVAEDTLAN---V 83
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+V G SG+D + G++ NN+F GNDV DG G DT Y + + +
Sbjct: 84 ENVYGGSGDDFITGDALNNLFRGGGGNDVLDGGGGNDTADYTDKTASVVVTLAGATPVTV 143
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
N +D +S+ E + + +IL + L IG D +
Sbjct: 144 FVNGIAEDMISNFENVYGGSGDDILTGDDRDNILRGEVGNDILNGGIGADSLFGGEGNDT 203
Query: 389 FGLSEGRDI-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G D + V+ A L A
Sbjct: 204 VDGGNGVDTFDLREKTSSVLVQLNGANGATVFVGGVAEDTIRNVENIVGGSAGDTLTGDA 263
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ L A + + G D + + + + + V + G A
Sbjct: 264 AANKLSGARGNDWLMGGSGADILDGGEDSDTADYSDKQAAIVVALNGGNPVTVTVGGLAE 323
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G + D L A+ +G D
Sbjct: 324 DSIAKIENIVGGSGD--DTLSGDAAANTFRGGLGADALDGGSGSD 366
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 58/448 (12%), Positives = 111/448 (24%), Gaps = 42/448 (9%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI-- 262
+ + G D D + G TI
Sbjct: 634 TGDGNSNTIRGGAGADGLDGGAGVDTADYRDKVTSVVVTLSGANAALVKVGGLNEDTIRN 693
Query: 263 ----AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
A + +++VG +V++GN + G+DV DG +G+DT Y + +
Sbjct: 694 FENVAGGSAGDTLVGDDLANVLLGNDGADTLKGGLGSDVLDGGNGIDTADYLEKADAISV 753
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+D + VE + + L + +G D
Sbjct: 754 TLNGTTNATVLVGGVAEDVIRGVE---------NILAGSGADTLVGDGASNTFRGALGAD 804
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ Y + A ++ G
Sbjct: 805 FIDGGAGSDT-----------------ADYREKAAAVDVTLFGAGDSFVFVGGVAEDTIR 847
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ + ++ L + GKD + G + + +Y D
Sbjct: 848 NIENVFGGKGNDTLTGDDSANTLNGNDGKDLLTGGGGADILDGG--AASDTANYRDKSAS 905
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
AA + G + + ++ L G D G
Sbjct: 906 VSVTLNGAASTAVMVGGVAEDTVRNIENVWGGTGNDSLSGDGNANLLSGGGGSD--MLSG 963
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
F+ L S D+ F + + + G ++ QF +
Sbjct: 964 GAGADIFQFDFALG-ASNVDMVLDFTAGDRLFLSKSVFTSLSGG---SLASNQFYAAAGA 1019
Query: 619 SEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+E + + +D LY D G+
Sbjct: 1020 TE--AQGVNQRVVYDTTTGALYYDADGN 1045
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 82/269 (30%), Gaps = 8/269 (2%)
Query: 200 GSLGNNIYKIE--VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
GS G+ + + + T+ G D+LD +Y++ ++ G
Sbjct: 700 GSAGDTLVGDDLANVLLGNDGADTLKGGLGSDVLDGGNGIDTADYLEKADAISVTLNGTT 759
Query: 258 KNMTIAQHT------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ +E+++ SG D ++G+ A+N F + G D DG +G DT Y
Sbjct: 760 NATVLVGGVAEDVIRGVENILAGSGADTLVGDGASNTFRGALGADFIDGGAGSDTADYRE 819
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + F +D + ++E + + L + L
Sbjct: 820 KAAAVDVTLFGAGDSFVFVGGVAEDTIRNIENVFGGKGNDTLTGDDSANTLNGNDGKDLL 879
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D+ + + + S + D +
Sbjct: 880 TGGGGADILDGGAASDTANYRDKSASVSVTLNGAASTAVMVGGVAEDTVRNIENVWGGTG 939
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAP 460
+ + D L D+++ A A
Sbjct: 940 NDSLSGDGNANLLSGGGGSDMLSGGAGAD 968
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/392 (14%), Positives = 108/392 (27%), Gaps = 25/392 (6%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
FE I + + R + + AD G G T+ N +
Sbjct: 155 NFENV-YGGSGDDILTGDDRDNILRGEVGNDILNGGIGADSLFGGEGNDTVDGGNGVD-- 211
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
V + N + + ++ + G + D
Sbjct: 212 --------TFDLREKTSSVLVQLNGANGATVFVGGVAEDTIRNVENIVGGSAGDTLTGDA 263
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
A K+ GA + + D D +
Sbjct: 264 AAN-KLSGA----------RGNDWLMGGSGADILDGGEDSDTADYSDKQAAIVVALNGGN 312
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G +IA+ IE++VG SG+D + G++A N F G D DG SG DT
Sbjct: 313 PVTVTVGGLAEDSIAK---IENIVGGSGDDTLSGDAAANTFRGGLGADALDGGSGSDTAD 369
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + V +D + ++E + ++
Sbjct: 370 FSDKAQSVVLALNGAIDAVATVGGTAEDSVRNIENIIGGAGNDQLTGDAAANMFRGGLGA 429
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L G D + ++ + + D LRN+ G+ ++
Sbjct: 430 DVLDGAAGSDTADFSDKTSSLVVTLAGASPATVLVGGIAEDTLRNIENIIGGSGNDVFVG 489
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
G++ + A ++ I +
Sbjct: 490 DGLQNVFDGGAGTDTADYSASAKAIAVTLNGA 521
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 76/291 (26%), Gaps = 10/291 (3%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + ++G+ +D + G + +++ G D+ +G +G+DT Y + +
Sbjct: 4 INGTSGNNILIGTGSDDSLNGLAGDDLLQGLGGADIINGGAGVDTADYREKAAPIVVTLT 63
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
N +D L++VE + ++ + L G D +
Sbjct: 64 GATAATVFINGVAEDTLANVENVYGGSGDDFITGDALNNLFRGGGGNDVLDGGGGNDTAD 123
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
++ + + + Y G D
Sbjct: 124 YTDKTASVVVTLAGATPVTVF--------VNGIAEDMISNFENVYGGSGDDILTGDDRDN 175
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
L ++ L G D + + + L +
Sbjct: 176 ILRGEVGNDILNGGIGADSLFGGEGNDTVDGGNGVDTFDLREKTSSVLVQLNGANGATVF 235
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G A G + L A+ L A + + +G D
Sbjct: 236 VGGVAEDTIRNVENIVGGSAG--DTLTGDAAANKLSGARGNDWLMGGSGAD 284
>gi|166368790|ref|YP_001661063.1| hemolysin-type calcium-binding region protein [Microcystis
aeruginosa NIES-843]
gi|166091163|dbj|BAG05871.1| hemolysin-type calcium-binding region protein [Microcystis
aeruginosa NIES-843]
Length = 894
Score = 81.0 bits (198), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/241 (17%), Positives = 67/241 (27%), Gaps = 39/241 (16%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ G L GG N + I G N + + + G
Sbjct: 32 GTEYNDVIFGGTASEYWGALSGGGGNDTISGNAGFDYIYGENGNDVLNGGDDSDYLYGGD 91
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------------------FYYAPS 313
GNDV+ G + ++ +GND+ +G +G D F + Y S
Sbjct: 92 GNDVLNGGAGSDNILGGNGNDLLNGDAGDDYFTGDEGDNDTINGGAGSDSYAADYSYGSS 151
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI---------------DSVNVKQ 358
L Y + + E D + +E
Sbjct: 152 GLTMTYDTAGSGTITVGTE--TDTFTSIESFNGFKGTDYNDVIFGGTRVYYYETLYGGSG 209
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ A + + G DV + + G D + G YDDL G+D
Sbjct: 210 NDTISGNAGGDYIYGENGNDVLNGGDGYDDLYGGNGNDTLQGTDGGTGEYDDLVGGSGND 269
Query: 419 R 419
R
Sbjct: 270 R 270
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 51/323 (15%), Positives = 96/323 (29%), Gaps = 37/323 (11%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ T + + + D ++ I A G L G
Sbjct: 1 MTYNTATGSGTITVGTETDTFTSIESFDGFKGTEYNDVIFGGTASEYWGA---LSGGGGN 57
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ G D Y + D + +I+ G
Sbjct: 58 DTISGNAGFDYIYGENGNDVLNGGDDSDYLYGGDGNDVLNGGAGSDNIL------GGNGN 111
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDD---------------LLDLTLIG----GVKN 241
L N + D TI G D D G G +
Sbjct: 112 DLLNGDAGDDYFTGDEGDNDTINGGAGSDSYAADYSYGSSGLTMTYDTAGSGTITVGTET 171
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVI---ESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ ES++ G + N I T + E++ G SGND + GN+ + + +GNDV
Sbjct: 172 DTFTSIESFNGFKGTDYNDVIFGGTRVYYYETLYGGSGNDTISGNAGGDYIYGENGNDVL 231
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENA----IIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+G G D + + + + + + + + L+D + + D +
Sbjct: 232 NGGDGYDDLY--GGNGNDTLQGTDGGTGEYDDLVGGSGNDRFILADTTKTFYDDGLTATE 289
Query: 355 NVKQRSILEYTASYEDLIQVIGQ 377
+ + ++ +D+IQ+ G
Sbjct: 290 GTSDYATIADFSTIDDIIQLRGS 312
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 41/293 (13%), Positives = 75/293 (25%), Gaps = 29/293 (9%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ ++G+ + + + F D F G+ D + + Y
Sbjct: 2 TYNTATGSGTITVGTETDTFTSIESFDGFKGTEYND-VIFGGTASEYWGALSGGGGNDTI 60
Query: 330 ANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ D++ + + L D +L A ++++ G D+
Sbjct: 61 SGNAGFDYIYGENGNDVLNGGDDSDYLYGGDGNDVLNGGAGSDNILGGNGNDLLNGDAGD 120
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
F EG D + GSD AA Y + G+ +
Sbjct: 121 DYFTGDEG------------DNDTINGGAGSDSYAADYSYGSSGLTMTYDT--------- 159
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
A + + F + F Y Y Y N S
Sbjct: 160 AGSGTITVGTETDTFTSIESFNGFKGTDYNDVIFGGTRVYYYETLYGGSGNDTISGNAGG 219
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD----APDLVQAGKDHFS 555
Y +G D + L ++ L + +G D F
Sbjct: 220 DYIYGENGNDVLNGGDGYDDLYGGNGNDTLQGTDGGTGEYDDLVGGSGNDRFI 272
Score = 41.7 bits (96), Expect = 0.41, Method: Composition-based stats.
Identities = 31/251 (12%), Positives = 52/251 (20%), Gaps = 39/251 (15%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + + + D+ G
Sbjct: 80 GGDDSDYLYGGDGNDVLNGGAGSDNILGGNGNDLLNGDAGDDYFTGDEGD---------- 129
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
++ D S+G M D I
Sbjct: 130 -----------------------NDTINGGAGSDSYAADYSYGSSGLTMTYDTAGSGTIT 166
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ +I + + G TL GG N I G
Sbjct: 167 VGTETDTFTSIESFNGFK--GTDYNDVIFGGTRVYYYETLYGGSGNDTISGNAGGDYIYG 224
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSAN----NVFFESSGNDVFDGSSGLDTFFYYA 311
N + + + G +GND + G + SGND F + TF+
Sbjct: 225 ENGNDVLNGGDGYDDLYGGNGNDTLQGTDGGTGEYDDLVGGSGNDRFILADTTKTFYDDG 284
Query: 312 PSYLYKIYRFE 322
+ +
Sbjct: 285 LTATEGTSDYA 295
Score = 40.2 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T + G++GN+ + GNS NN +G D G G DTF + +
Sbjct: 720 GTNNINGTGNAGNNKITGNSGNNQINGRAGIDTLTGGLGADTFIFQFGQS---TISTSDR 776
Query: 325 IIVYDANEHKQDFLS 339
I + N K D L+
Sbjct: 777 ITDFAINSDKIDLLT 791
>gi|291298168|ref|YP_003509446.1| hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
gi|290567388|gb|ADD40353.1| Hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
Length = 572
Score = 80.6 bits (197), Expect = 7e-13, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 3/156 (1%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+ G K ID S ++ + T+ + + G SGNDV+ G+ +++ S
Sbjct: 195 SGGGNDKVSIDDKVGSGITVSAGSGDDTVDGGGKADVIDGGSGNDVLKGHDGDDIIHGGS 254
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCID 352
G+D DG G D + + +Y + ++ + + + + +
Sbjct: 255 GHDYIDGQDGNDRL--HGGAGNDHVYGLDGDDTIHGGDGDDSLEGGQNNDTIDGGTGKDV 312
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
L A + + G+D + E
Sbjct: 313 VSGGYGDDTLRGGAQNDKIYAGAGKDTIDGGDGTDE 348
>gi|170747639|ref|YP_001753899.1| hypothetical protein Mrad2831_1212 [Methylobacterium radiotolerans
JCM 2831]
gi|170654161|gb|ACB23216.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 305
Score = 80.6 bits (197), Expect = 7e-13, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 48/138 (34%), Gaps = 22/138 (15%)
Query: 478 GRFV-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHED 535
GR FD+ YL S D+ G D HY+ +G +G +P F L Y
Sbjct: 24 GRVPKIFDATFYLKSNPDV-AASGLDPYF---HYVYYGSSQGLDPAEDFHTLFYRKQSG- 78
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
H+ +G + G + F+ YL Y D+ H
Sbjct: 79 ---------PTKLDPVRHYIRYGVKLGIDPNPNFSSSSYLARYPDV----AERAINPLLH 125
Query: 594 YITHGMKEGRALGISGMQ 611
Y T+G EGR S +
Sbjct: 126 YRTNGKLEGRLASASASK 143
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 52/140 (37%), Gaps = 24/140 (17%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGS 491
GR P F A Y+ S+ D+ + D H+ +G +G F + Y
Sbjct: 24 GRVPKIFDATFYLKSNPDVAASGLDPYF-------HYVYYGSSQGLDPAEDFHTLFYRKQ 76
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAG 550
G + RHYI +GVK G +P+ F + Y+A + D+
Sbjct: 77 -------SGPTKLDPVRHYIRYGVKLGIDPNPNFSSSSYLARYPDVAE-------RAINP 122
Query: 551 KDHFSNFGYEEGRSITFNPD 570
H+ G EGR + +
Sbjct: 123 LLHYRTNGKLEGRLASASAS 142
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 47/135 (34%), Gaps = 22/135 (16%)
Query: 393 EGRDI-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHE 450
GR FD+ YL S D+ HY+ +G +G +P + F L Y
Sbjct: 23 LGRVPKIFDATFYLKSNPDVAAS----GLDPYFHYVYYGSSQGLDPAEDFHTLFYR---- 74
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ H+ +G + G F S YL Y D+ +
Sbjct: 75 ------KQSGPTKLDPVRHYIRYGVKLGIDPNPNFSSSSYLARYPDVAERAIN----PLL 124
Query: 509 HYITHGVKEGRNPDA 523
HY T+G EGR A
Sbjct: 125 HYRTNGKLEGRLASA 139
>gi|329848138|ref|ZP_08263166.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843201|gb|EGF92770.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 763
Score = 80.6 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 53/345 (15%), Positives = 85/345 (24%), Gaps = 13/345 (3%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
V + DV G + ++ + G G
Sbjct: 388 AAVPSIDGTDLADDLEGTAGNDVINGLGGADLLTGNDGDDALDGGAGADTMTGGMGNDTY 447
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
Y D + + S M+ D G GN
Sbjct: 448 YVDDVGDKVNEPHGQGTDTVYTSVSYSLFGRAVENLIMLGDGDLSVTANGMNNRLTGN-- 505
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----DLNTESWSS-IGGYEKNM 260
+ GDD + + D S S + G
Sbjct: 506 -AGNNSFDGGTGGDQMIGGLGDDTYYVDNFYDNVTELHHQGTDTVFASVSYALFGRAVET 564
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T + G+S N+ + G + NNV +G D G G DT++
Sbjct: 565 LTLTGTGNLNGTGNSLNNTLNGTAGNNVLDGGTGGDKMTGGLGDDTYYVDNFFDNVAELH 624
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
F+ V+ + F VE + I++ + L L IG D+
Sbjct: 625 FQGTDTVFSTVSYSL-FGRAVEVMTLTGAASINATGNSLANTLTGNGGANVLDGGIGNDL 683
Query: 380 FESMKHFYEFGLS--EGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
F + G+D D ++ G AA
Sbjct: 684 LTGGLGADVFLFNALSGKDTVNDFSGADNDMVNINAYTGGVANAA 728
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 52/339 (15%), Positives = 86/339 (25%), Gaps = 32/339 (9%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G + + + + G G D++ GN ++ +G D G G DT++
Sbjct: 392 SIDGTDLADDLEGTAGNDVINGLGGADLLTGNDGDDALDGGAGADTMTGGMGNDTYYVDD 451
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ VY + + F VE L + + L
Sbjct: 452 VGDKVNEPHGQGTDTVYTSVSYSL-FGRAVENL--------IMLGDGDLSVTANGMNNRL 502
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G + F+ + G D + Y + G+D A+ Y G
Sbjct: 503 TGNAGNNSFDGGTGGDQMIGGLGDDTYYVDNFY--DNVTELHHQGTDTVFASVSYALFGR 560
Query: 432 K------------EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC---- 475
G L A + L +G D +
Sbjct: 561 AVETLTLTGTGNLNGTGNSLNNTLNGTAGNNVLDGGTGGDKMTGGLGDDTYYVDNFFDNV 620
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA---S 532
E F D+ SY A G +
Sbjct: 621 AELHFQGTDTVFSTVSYSLFGRAVEVMTLTGAASINATGNSLANTLTGNGGANVLDGGIG 680
Query: 533 HEDLINAFADAPDLVQA--GKDHFSNFGYEEGRSITFNP 569
++ L L A GKD ++F + + N
Sbjct: 681 NDLLTGGLGADVFLFNALSGKDTVNDFSGADNDMVNINA 719
Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/298 (14%), Positives = 82/298 (27%), Gaps = 26/298 (8%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
D + NG ++ D G+G T N + L H
Sbjct: 487 GDGDLSVTANGMNNRLTGNAGNNSFDGGTGGDQMIGGLGDDTYYVDNFYDNVTE---LHH 543
Query: 137 PG-SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G Y + LT + +S+ + G ++ K+
Sbjct: 544 QGTDTVFASVSYALFGRAVETLTLTGTGNLNGTGNSLNNTLNGTAGNNVLDGGTGGDKMT 603
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G LG++ Y ++ + + + +L G + L +
Sbjct: 604 GG----LGDDTYYVDNFFDNVAELHFQGTDTVFSTVSYSLFGRAVEVMTLTGAASI---- 655
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ G+S + + GN NV GND+ G G D F + A S
Sbjct: 656 --------------NATGNSLANTLTGNGGANVLDGGIGNDLLTGGLGADVFLFNALSGK 701
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ F A +++ + + ++ A D++
Sbjct: 702 DTVNDFSGADNDMVNINAYTGGVANAAMVAQVGLNVVITLGGGNTVTVLNAVQADVLS 759
>gi|66047050|ref|YP_236891.1| putative hemolysin-type calcium-binding region [Pseudomonas syringae
pv. syringae B728a]
gi|63257757|gb|AAY38853.1| Hemolysin-type calcium-binding region:Putative Ig [Pseudomonas
syringae pv. syringae B728a]
Length = 1610
Score = 80.6 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 84/299 (28%), Gaps = 12/299 (4%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S +D ++G+S N+V G D G G D + + +
Sbjct: 1227 HIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ ++VE L I+ + ++++ AS L G D+
Sbjct: 1287 VSSVSWTLGANVENLVLTGVSAINGIGNAVKNVIIGNASNNILDGAAGADMLTGGDGSDS 1346
Query: 389 FGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRGAAARH---YITHGVKEGRNPDAFKAL 443
+ + + R + ++ +G D + + S A + G +
Sbjct: 1347 YYVDDAADRVVETNTDAQVGGVDTVYSSLASYTLGANLENLVINSSGAANATGNALDNLI 1406
Query: 444 EYIASHEDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
A + + + L ++L +D
Sbjct: 1407 YAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTSAQQATGGSGLDTLKGTENLIGSQFAD 1466
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
++ T D L A + LI + G DH+ G +
Sbjct: 1467 TLTGNKNANTLS-----GGDGNDTLSGGAGDDVLIGGSGADTLIGGTGADHYVFNGISD 1520
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/293 (13%), Positives = 84/293 (28%), Gaps = 6/293 (2%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G N+ Y + + +D +I + + + ++ G
Sbjct: 327 GNTITGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVNG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I E + G +G D + G S +++ +G D G +G DTF + +
Sbjct: 387 TEGNDVITGGAAHEQIFGLAGKDTLNGGSGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + +V D + L+++ ++N+ + L+ T
Sbjct: 447 YRTATTSSTDLVTDFDISQDRIDLTNLGFTGLGSGKGGTLNISYNATLDRTYVKSLDADA 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ I D L G+D G
Sbjct: 507 SGNRFELGLSGNLKDTLNASHFIFQHVVEGTAGGDTLTGTDGNDVLN-----GNAGTDRI 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ A + L + D + N+ + +
Sbjct: 562 DGGAGADTITGGADADTLTGGAGADLFIYNSRLDSYRNYTASGTKQSDTITDF 614
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 81/283 (28%), Gaps = 23/283 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE N + + S + E + N
Sbjct: 1262 DIYVVDNAFDTVTESNDS-PSQVDTVVSSVSWTLGANVENLVLTGVSAINGIGNAVKNVI 1320
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ + AD+ G G + +A +
Sbjct: 1321 IGNASNNILDGAAGADMLTGGDGSDSYYVDDAA---------------DRVVETNTDAQV 1365
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ +S+ SY + + A + + GA G+N+ + +
Sbjct: 1366 GGVDTVYSSLASYTLGANLENLVINSSGAANATGNALDNLIYAGA-----GDNVM--DGR 1418
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ +G L+ + + ++ G + T+ + ++
Sbjct: 1419 DGNDTVSYLFATAGVTVALNTSAQQATGGSGLDTLKGTENLIGSQFADTLTGNKNANTLS 1478
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
G GND + G + ++V SG D G +G D + + S
Sbjct: 1479 GGDGNDTLSGGAGDDVLIGGSGADTLIGGTGADHYVFNGISDT 1521
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 55/493 (11%), Positives = 124/493 (25%), Gaps = 26/493 (5%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ + + D G G ++ ++ G +
Sbjct: 382 VTVNGTEGNDVITGGAAHEQIFGLAGKDTLNGGSGDDILVGGAGADKLTGGAGAD-TFRF 440
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ Y D +S + + + +I +
Sbjct: 441 DQLTDSYRTATTSSTDLVTDFDISQDRIDLTNLGFTGLGSGKGGTLNI--------SYNA 492
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+L K + D L+ + T ++ G + N
Sbjct: 493 TLDRTYVKSLDADASGNRFELGLSGNLKDTLNASHFIFQHVVE--GTAGGDTLTGTDGND 550
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + + + G +G D + G + + +G D+F +S LD++ Y S
Sbjct: 551 VLNGNAGTDRIDGGAGADTITGGADADTLTGGAGADLFIYNSRLDSYRNYTASGT----- 605
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ I + LS + D +++ + + T D + G
Sbjct: 606 KQSDTITDFNPAEDRIDLSSIGLRGIGDGSANTIYLSVNADGSKTYIKTDAVDSTGNRFE 665
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+++ LS F + L + + +
Sbjct: 666 IALQGNLADKLSASN-FIFSTASAANQAPVLNTPLMDQNVTELKAFSYAVQPGSFSDPDS 724
Query: 441 KALEYIASHEDLINAFA----DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
L Y A+ D D+ L G + G D+ +
Sbjct: 725 DTLTYSATLADNSALPEWLKFDSKTLTFSGTPGGTASGLYSVLLTASDATGASVADSFAI 784
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
NV G + + + + + L AG+D +
Sbjct: 785 NVGNVTPGILTGTEN---AEALYGTEGNDTILGLGGDDTLRGDTGADIINGGAGRD--AL 839
Query: 557 FGYEEGRSITFNP 569
+G + + ++
Sbjct: 840 YGGADADTFVYSA 852
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 38/248 (15%), Positives = 76/248 (30%), Gaps = 8/248 (3%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
S I +G T + K D + I L + A +
Sbjct: 624 SSIGLRGIGDGSANTIYLSVNADGSKTYIKTDAVDSTGNRFEIALQGNLADKLSASNFIF 683
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD-ASFGYCATPMVSDIVAVQKIY 195
+ + + SY + S D S + ++D A+ +
Sbjct: 684 STASAANQAPVLNTPLMDQNVTELKAFSYAVQPGSFSDPDSDTLTYSATLADNSALPEWL 743
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+L + + T D+ G + D I++ + + G
Sbjct: 744 KFDSKTLTFSGTPGGTASGLYSVLLTASDATGASVADSFA-------INVGNVTPGILTG 796
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + ++++G G+D + G++ ++ +G D G + DTF Y A +
Sbjct: 797 TENAEALYGTEGNDTILGLGGDDTLRGDTGADIINGGAGRDALYGGADADTFVYSALTDS 856
Query: 316 YKIYRFEN 323
Y+ Y
Sbjct: 857 YRDYDAGG 864
>gi|241205214|ref|YP_002976310.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859104|gb|ACS56771.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 932
Score = 80.6 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 50/297 (16%), Positives = 83/297 (27%), Gaps = 13/297 (4%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T+ + + T + + + D G G I I
Sbjct: 428 TTGAGNDNINGGDG--ADTLNGGAGNDLIQGGNGNDTLNGGDGNDHISGDLGNDVIRGGA 485
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G V + D + F P +S T +S + +
Sbjct: 486 GNDTISDGELFGLASEVVDIDAGDGNDAITLETFAPMNSGTIDGGAGIDTLQISSLQGLT 545
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD----------DLLDLTLIGGVKNY 242
+ G ++ Q + I D GD LDL+ G
Sbjct: 546 IKNVEILETAGWSVAGSSAQLESFDKIVWSTDPFGDFRASVALTDSAHLDLSDELGDLGS 605
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + + G+ GND++ GN+ N+ +G+D +G
Sbjct: 606 FIDGHAFGIDVKTGSGDDEFTGTDGNDIFDGNGGNDILNGNAGNDKLTGGAGDDTINGGD 665
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G+DT + Y N + + D L+DVE RFAD D
Sbjct: 666 GIDTAIFSGNFANYSF-ALNNGDHILTSAGEGTDTLTDVELARFADGVYDFATETFT 721
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 66/409 (16%), Positives = 111/409 (27%), Gaps = 26/409 (6%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI---GHALGLMHPG 138
+ D G ++ + I G L G
Sbjct: 68 TVTTGAGNDNISGGEGADTLSGGGGDDTIYGNAGNDKLIGGDGNDRITDGGFGFVLGPDG 127
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
S + + + D + I V+ + A
Sbjct: 128 SLQSEIVDIDGGDGDDLITIERFAPLISGTIDGGAGIDTLRASALRGLTIKNVEVLELAD 187
Query: 199 KGSLG--------NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G + I + + + DS DL D G S
Sbjct: 188 FRVSGSSAQFESFDKIARSTDPVFNFDPSLVVTDSAHLDLSDELGDLGTLV----RGFSG 243
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ + N A V + GS G+D++ GN N+ GND +G +G+DT +
Sbjct: 244 IDVKTGDGNDEFAGSDVNDIFDGSGGSDLINGNDGNDKLTGGDGNDTINGGAGIDTAAFA 303
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
Y +N V + D L+DVE RFAD D + +
Sbjct: 304 GNFAEYSF-EIDNGSRVVTSALEGTDRLTDVEFARFADGVYDFATETFTLNSTEPGTPLN 362
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD----DLRNVFGSDRGAAARHY 426
++ G + ++ F + + +I + L D DL + GS
Sbjct: 363 ILDTNGATITKTGAEFEAYDVIRDSEINPLVAVNLVVSDSGAVDLADELGSGSANVTGSS 422
Query: 427 ITH------GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ G D L A ++ + + G DH
Sbjct: 423 GDNAITTGAGNDNINGGDGADTLNGGAGNDLIQGGNGNDTLNGGDGNDH 471
>gi|85714736|ref|ZP_01045723.1| possible protease [Nitrobacter sp. Nb-311A]
gi|85714762|ref|ZP_01045749.1| possible protease [Nitrobacter sp. Nb-311A]
gi|85698621|gb|EAQ36491.1| possible protease [Nitrobacter sp. Nb-311A]
gi|85698647|gb|EAQ36517.1| possible protease [Nitrobacter sp. Nb-311A]
Length = 160
Score = 80.6 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 61/154 (39%), Gaps = 33/154 (21%)
Query: 184 MVSDIVAVQKIYGAP-KGSLGNNIYKIEVQ------------QKDSPFIQTIYDSGGDDL 230
M+ DI A+Q +YGA + G +Y + + TI+D GG D
Sbjct: 1 MMFDIAALQHLYGANFNTNSGATVYSWSATGEMFVNGVAQGRPTGNRILLTIWDGGGSDT 60
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGY-------------EKNMTIA------QHTVIESV 271
D + + +DL SW++ N+ A ++IE+
Sbjct: 61 YDFSNYATNLS-VDLRPGSWTTTSSAQLARLHYDGSQLATGNIANALLFDADPRSLIENA 119
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
VG +GND ++GN A N + GND G G D
Sbjct: 120 VGGAGNDQILGNLAANSLRGAGGNDCLYGLEGND 153
>gi|212634232|ref|YP_002310757.1| hemolysin-type calcium-binding region [Shewanella piezotolerans WP3]
gi|212555716|gb|ACJ28170.1| Hemolysin-type calcium-binding region [Shewanella piezotolerans WP3]
Length = 1588
Score = 80.6 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 51/485 (10%), Positives = 104/485 (21%), Gaps = 22/485 (4%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ D G G TI I G
Sbjct: 969 TVYAGTGDDVIYGGDGNDALHGEEGDDFIDGGTGSDTISGGVGADLIFGGDGSDTIAGDE 1028
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G ++G + + + D + G + + +
Sbjct: 1029 GNDLLFGGEGHDQIAGGEGDDQLFGEAGDDSLSGGAGADLLFGGAGDDTLDGGDADDQLF 1088
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G+ + + G D + GG + + L + +I G
Sbjct: 1089 AGD----GDDNVIGGLGSDFVDGGSGHDTI----AGGEGDDVLLGGDGNDTIEGGAGKDK 1140
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS-------Y 314
+ T + ++G G+D + G +N +G+DV G SG D
Sbjct: 1141 LFAGTGNDHLIGGEGDDELHGEFGDNTLDGGAGDDVIYGGSGNDRLIGGEGKDHLESHLG 1200
Query: 315 LYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + + H D D + + + + ++ +
Sbjct: 1201 NNTVEGGSGEDTIITGSGHDTIDGGDDNDSIEAGAGDNIVSGGAGDDTITTGSGHDLIAG 1260
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D+ + + + G D + + G
Sbjct: 1261 GEGDDIIHAGEGHNQVSGGAGNDSIIAGIGSDTISGGEGHDIIDAGNGDNQISGDAGNDT 1320
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+ A + + G D + +
Sbjct: 1321 LIAGAGSDVISGGAGDDTIRAGDGHNTVTGGEGDDSIIAGEGHDNLSGGAGNDRLEAGAG 1380
Query: 494 DLRNVFGS------DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
+ G G G + L ++ L +
Sbjct: 1381 NNTVSGGDGDDVLIATGGDDNLSGGAGSDNLNAGNGNNQLFGGDGNDKLTSGSGSDLLEG 1440
Query: 548 QAGKD 552
AG D
Sbjct: 1441 GAGND 1445
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/504 (12%), Positives = 128/504 (25%), Gaps = 37/504 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + S + D DV G G +I++ I LG
Sbjct: 638 SGGEGNDELLSGSGDNFLDGGSGDDIITAQDGDDVLIGGDGHDSIIAGAGDDIIDAGLGN 697
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ +G VY D + + L + + + +D G +
Sbjct: 698 DTIDAGDGNDTVYAQDGNDTIEGGLGNDLLHGGQGIDHLDGGEGDDTLYGGGGADTLIGG 757
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G G + + T+ G D L GG+ + + + ++
Sbjct: 758 AGNDLVDGG----EGDDVITGGEGDDTLIGGSGADQL----SGGLGDDVLVGDAGDDTLL 809
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------ 308
G N TI +S++G +G+D + G ++ G D G +G DT +
Sbjct: 810 GEAGNDTIYAGAGSDSLLGGAGDDKLYGGDGDDELIGGEGYDELYGGAGNDTLYAENEAG 869
Query: 309 ----------YYAPSYLYKIYRFENAIIVY----------DANEHKQDFLSDVERLRFAD 348
+ ++Y + A + D + + +
Sbjct: 870 LLAGGEGDDKLIGGTADDQLYGDGGNDTILAAEGDDLVFAGAGDDTVDTGTGDDVVFAGT 929
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ + + G+D G D+ + +
Sbjct: 930 GSDNIATGAGDDQVFGEDGDNTINTGEGKDEIYGGVGADTVYAGTGDDVIYGGDGNDALH 989
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
+ + F + G D + ++ L G D
Sbjct: 990 GEEGDDFIDGGTGSDTISGGVGADLIFGGDGSDTIAGDEGNDLLFGGEGHDQIAGGEGDD 1049
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
++ + L G D G + + G ++
Sbjct: 1050 QLFGEAGDDSLSGGAGADLLFGGAGDDTLDGGDADD---QLFAGDGDDNVIGGLGSDFVD 1106
Query: 529 YIASHEDLINAFADAPDLVQAGKD 552
+ H+ + D L G D
Sbjct: 1107 GGSGHDTIAGGEGDDVLLGGDGND 1130
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 60/470 (12%), Positives = 110/470 (23%), Gaps = 34/470 (7%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
S +D G G + + + I +G +G
Sbjct: 441 GYAGANVLDGGSGNDTIYGGSDSDQINAGEGDDLVYAESGDDVIEGGVGNDALFGGDGNN 500
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ G +DS + S D + + + +Y +
Sbjct: 501 TIDGGTG---HDSIYAGDGDDTLIGGSGDDKIYSGAGSNTIDAGDGNDLVYAGVDADTID 557
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ T+ G+D + I G E + TI
Sbjct: 558 -AGSGDDVIFSDAGDDTVIAGAGNDQIYA-------------GAGDDVITGGEGDDTIYA 603
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ V+G GND + G + + GND G G D + +
Sbjct: 604 EDGDDLVIGGVGNDTLYGGAGADRLEGGEGNDALSGGEGNDEL----------LSGSGDN 653
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + + L D + I++ + + G D +
Sbjct: 654 FLDGGSGDDIITAQDGDDVLIGGDGHDSIIAGAGDDIIDAGLGNDTIDAGDGNDTVYAQD 713
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G D+ + G A G + +
Sbjct: 714 GNDTIEGGLGNDLLHGGQGIDHLDGGEGDDTLYGGGGADTLIGGAGNDLVDGGEGDDVIT 773
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVFGSD 502
+ LI +G D ++ D+ D L G D
Sbjct: 774 GGEGDDTLIGGSGADQLSGGLGDDVLVGDAGDDTLLGEAGNDTIYAGAGSDSLLGGAGDD 833
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ Y G E + + L A ++ L G D
Sbjct: 834 -----KLYGGDGDDELIGGEGYDELYGGAGNDTLYAENEAGLLAGGEGDD 878
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 52/413 (12%), Positives = 102/413 (24%), Gaps = 18/413 (4%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
S I + D +G T+ + I
Sbjct: 1167 TLDGGAGDDVIYGGSGNDRLIGGEGKDHLESHLGNNTVEGGSGEDTI--------ITGSG 1218
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G DND +++S D++ S D + + G + S
Sbjct: 1219 HDTIDGGDDNDSIEAGAGDNIVSGGAGDDTITTGSGHDLIAGGEGDDI-IHAGEGHNQVS 1277
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G TI G D++D G + ++ +
Sbjct: 1278 GG----AGNDSIIAGIGSDTISGGEGHDIID----AGNGDNQISGDAGNDTLIAGAGSDV 1329
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I+ +++ G++ V G ++ G+D G +G D
Sbjct: 1330 ISGGAGDDTIRAGDGHNTVTGGEGDDSIIAGEGHDNLSGGAGNDRLE-AGAGNNTVSGGD 1388
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ +++ + + + L + L + + L G D
Sbjct: 1389 GDDVLIATGGDDNLSGGAGSDNLNAGNGNNQLFGGDGNDKLTSGSGSDLLEGGAGNDALS 1448
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
S + EG D Y + N + G + + G +
Sbjct: 1449 SGSGNDQLFGGEGNDNLSGGSGDDMLYGEAGNDKLTGGGGNDQLFGGDGDDKLVGSGGND 1508
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
L ++ L + VG D + + + G D
Sbjct: 1509 QLHGDVGNDQLSGGSGNDMLFAGVGDDKLDGGSGSDELYGGDGADTLAGGSGD 1561
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/335 (11%), Positives = 78/335 (23%), Gaps = 10/335 (2%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
T+ G D +L+GG + G E + +A ++++ SG D
Sbjct: 319 NDTLIGGAGHD----SLLGGKGIDELSGGSGNDYLQGDEGDDVLAGGEGNDTLIAGSGAD 374
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G S +V SG+D G G D F + ++
Sbjct: 375 ELDGGSGADVLLAGSGDDTLTGGEGDDKLF--GEEGSDTLSGGAGNDELHAGGGDDVLTG 432
Query: 339 SDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ + F + + + + G D+ + G D
Sbjct: 433 GAGDDVLFGYAGANVLDGGSGNDTIYGGSDSDQINAGEGDDLVYAESGDDVIEGGVGNDA 492
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
F + G + + ++ ++ +
Sbjct: 493 LFGGDGNNTIDGGTGHDSIYAGDGDDTLIGGSGDDKIYSGAGSNTIDAGDGNDLVYAGVD 552
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
G D + ++ + D G Y G
Sbjct: 553 ADTIDAGSGDDVIFSDAGDDTVIAGAGNDQIYAGAGDDVITGGEGDDTI---YAEDGDDL 609
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L A + L + G D
Sbjct: 610 VIGGVGNDTLYGGAGADRLEGGEGNDALSGGEGND 644
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/375 (10%), Positives = 92/375 (24%), Gaps = 11/375 (2%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + D+ G G I + +++ G
Sbjct: 1223 DGGDDNDSIEAGAGDNIVSGGAGDDTITTGSGHDLIAGGEGDDIIHAGEGHNQVSGGAGN 1282
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G + G + D+ + + A G + ++
Sbjct: 1283 DSIIAGIGSDTISGGEGHDIIDAGNGDNQISGDAGNDTLIAGAGSDVISGGAGDDTIRAG 1342
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + G + + + G+D L+ + + +
Sbjct: 1343 DGHNTVTGG----EGDDSIIAGEGHDNLSGGAGNDRLEAGAGNNTVS----GGDGDDVLI 1394
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ ++ +++ +GN+ + G N+ SG+D+ +G +G D + S
Sbjct: 1395 ATGGDDNLSGGAGSDNLNAGNGNNQLFGGDGNDKLTSGSGSDLLEGGAGNDAL--SSGSG 1452
Query: 315 LYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+++ E + + + + ++L L + + L
Sbjct: 1453 NDQLFGGEGNDNLSGGSGDDMLYGEAGNDKLTGGGGNDQLFGGDGDDKLVGSGGNDQLHG 1512
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+G D G D Y + + G
Sbjct: 1513 DVGNDQLSGGSGNDMLFAGVGDDKLDGGSGSDELYGGDGADTLAGGSGDDILFGDSGADT 1572
Query: 434 GRNPDAFKALEYIAS 448
L A
Sbjct: 1573 LDGGTGVDTLFGGAR 1587
Score = 41.7 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 61/502 (12%), Positives = 113/502 (22%), Gaps = 51/502 (10%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS---------------- 139
+ + D G G TI I GL
Sbjct: 23 TGNDIIDGRSGDDYLVGGEGDDTISGQEGRDFILGDQGLGEQSDTPVIENAETTAWGVEQ 82
Query: 140 --YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+N + + + + ++ +P++ D +
Sbjct: 83 QVFNAEDSIEPMAGNCAASQIVNIGGYVGNVGNTFTLNVALPKDSPVLQDGAELTINILI 142
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-------IGGVKNYIDLNTESW 250
P + I + + I D LD + GV ++N +S
Sbjct: 143 PDENGNMVIAASGTATQLADGTIQINFEINSDQLDASGDIELQFVSTGVDAGTEINIDSV 202
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSG------------------NDVVIGNSANNVFFES 292
+ N + + ++G G ND + G + +++
Sbjct: 203 ELLAHNTYNDVLDGGVGDDHLMGQQGEDKLFGGDGDDQLDGGINNDELHGEAGDDLLMGG 262
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCI 351
G+D+ G G DT + + + + + L D
Sbjct: 263 QGDDLLTGGEGQDTLM--GGDDNDTLAGGAGNDTLMGELGDDTLEGGDGDDLLIGDDGND 320
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ L ++L G D + + EG D
Sbjct: 321 TLIGGAGHDSLLGGKGIDELSGGSGNDYLQGDEGDDVLAGGEGNDTLIAGSGADELDGGS 380
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
G + + L A +++L D G D
Sbjct: 381 GADVLLAGSGDDTLTGGEGDDKLFGEEGSDTLSGGAGNDELHAGGGDDVLTGGAGDDVLF 440
Query: 472 NFGCEEGRFVT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
+ + +Y GS D N D Y G AL
Sbjct: 441 GYAGANVLDGGSGNDTIYGGSDSDQINAGEGDDL----VYAESGDDVIEGGVGNDALFGG 496
Query: 531 ASHEDLINAFADAPDLVQAGKD 552
+ + G D
Sbjct: 497 DGNNTIDGGTGHDSIYAGDGDD 518
>gi|332703895|ref|ZP_08423983.1| hypothetical protein Desaf_2773 [Desulfovibrio africanus str.
Walvis Bay]
gi|332554044|gb|EGJ51088.1| hypothetical protein Desaf_2773 [Desulfovibrio africanus str.
Walvis Bay]
Length = 736
Score = 80.6 bits (197), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 63/191 (32%), Gaps = 12/191 (6%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S +++ G + I + + G +G+D +IGN+ ++ GND DG G D
Sbjct: 442 ASIANVEGSIFSDAIYGNDHNNHLKGLAGDDSIIGNAGDDTLDGGQGNDTIDGGLGSDVI 501
Query: 308 F------------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
YY+ S+ N D + D S +E + ++ +
Sbjct: 502 IGGSGNDWVSYQSYYSCSFQGMSIDLVNGACSLDTSSEDTDQFSGIENVEGSEYGDEICG 561
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ L + + G D + + G D + + G D F
Sbjct: 562 DSLGNTLHGMGGSDTISGGAGSDFINGGEGIDTLYGNAGADTFYFDNMEDGFSVDTHISF 621
Query: 416 GSDRGAAARHY 426
+G + +
Sbjct: 622 SGQQGDLIKDF 632
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 63/194 (32%), Gaps = 20/194 (10%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ LIG N TE I G + ++ +++ G GNDV+ G + ++V
Sbjct: 313 TFPIFLIGDGGNNSIEGTEYPDFIQGLAGDDSLWGLGSNDTLQGGEGNDVLYGGAGDDVL 372
Query: 290 FESSGNDVFDGSSGL---------DTF-----FYYAPSYLYKIYR------FENAIIVYD 329
G++ DG +G DTF Y Y +E+ +
Sbjct: 373 DGGRGDNSIDGGAGNNWVSYASVRDTFQNKGVVVYLDDEGDDSYGVREYPVYESNGNLLS 432
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ D L+ + + + + L+ A + +I G D + +
Sbjct: 433 EPHSEYDDLASIANVEGSIFSDAIYGNDHNNHLKGLAGDDSIIGNAGDDTLDGGQGNDTI 492
Query: 390 GLSEGRDITFDSYL 403
G D+
Sbjct: 493 DGGLGSDVIIGGSG 506
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 76/270 (28%), Gaps = 35/270 (12%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL------------HEIGHALGL 134
G T + + DV G G +I G + L
Sbjct: 349 GSNDTLQGGEGNDVLYGGAGDDVLDGGRGDNSIDGGAGNNWVSYASVRDTFQNKGVVVYL 408
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + G Y V N + + ++ S A ++ +
Sbjct: 409 DDEGDDSYGVREYPVYESNGNLLSEPHSEYDDLASIANVEGSIFSDAIYGNDHNNHLKGL 468
Query: 195 YGAPK--GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLI---GGVKNYIDLN 246
G G+ G++ + I G+D + IDL
Sbjct: 469 AGDDSIIGNAGDDTLDGGQGNDTIDGGLGSDVIIGGSGNDWVSYQSYYSCSFQGMSIDLV 528
Query: 247 TESWS---------------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ S ++ G E I ++ ++ G G+D + G + ++
Sbjct: 529 NGACSLDTSSEDTDQFSGIENVEGSEYGDEICGDSLGNTLHGMGGSDTISGGAGSDFING 588
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
G D G++G DTF++ + +
Sbjct: 589 GEGIDTLYGNAGADTFYFDNMEDGFSVDTH 618
>gi|254513334|ref|ZP_05125399.1| type I secretion target repeat protein [Rhodobacteraceae bacterium
KLH11]
gi|221532338|gb|EEE35334.1| type I secretion target repeat protein [Rhodobacteraceae bacterium
KLH11]
Length = 873
Score = 80.2 bits (196), Expect = 9e-13, Method: Composition-based stats.
Identities = 48/343 (13%), Positives = 75/343 (21%), Gaps = 26/343 (7%)
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
+D GIG T+ ++ + G G G+ + Y+ D
Sbjct: 490 DDLSGNAGSDALYGGIGTDTLTGGSSGDVLEGDDGNDLLHGGAGVGANSGIVSQYDEDGV 549
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
+ +D M G G +
Sbjct: 550 RYDQFGNVLTEDDDSLFGGQGDDHLM--------GSAGHDMLDGG----AGDDLLDGGSG 597
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ G+D L GG + + G N I + + G SG D
Sbjct: 598 FDILIGGQGNDTL----RGGSEADTLRGEGGHDVMDGGSGNDEIFGGIGDDQIDGGSGAD 653
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V+ G N+ SG+D G G DT + D +
Sbjct: 654 VLNGGDGNDSLSGRSGDDFLSGDDGNDTL----SGGSGNDDLDGGVGDDSLSGGSGSDTV 709
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
L + L D S G D+
Sbjct: 710 IG------GLGSDTLDGGSGNDTLAGGEGSDTLKGGSDDDELIGGAGNDYLNGSSGDDVL 763
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
Y + S A R + +G
Sbjct: 764 NGGSGKDRLYLGAGDDHASGGADADRFIFRNEDLDGSTDTITD 806
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/366 (12%), Positives = 90/366 (24%), Gaps = 23/366 (6%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
+ A + D+ A + + + + +Y
Sbjct: 445 PKSYSNDGAADPTATSPFAPVDLYASVLVKDLTLVATTEGALSYDDDLSGNAGSDALYGG 504
Query: 226 GGDDLLDLTLIGGVKNYIDLNT---------------ESWSSIGGYEKNMTIAQHTVIES 270
G D L G V D N + G +S
Sbjct: 505 IGTDTLTGGSSGDVLEGDDGNDLLHGGAGVGANSGIVSQYDEDGVRYDQFGNVLTEDDDS 564
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS------YLYKIYRFENA 324
+ G G+D ++G++ +++ +G+D+ DG SG D + R E
Sbjct: 565 LFGGQGDDHLMGSAGHDMLDGGAGDDLLDGGSGFDILIGGQGNDTLRGGSEADTLRGEGG 624
Query: 325 IIVYDANEHKQDFLSDV--ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
V D + + +++ L + + L G D
Sbjct: 625 HDVMDGGSGNDEIFGGIGDDQIDGGSGADVLNGGDGNDSLSGRSGDDFLSGDDGNDTLSG 684
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ G D L + G +
Sbjct: 685 GSGNDDLDGGVGDDSLSGGSGSDTVIGGLGSDTLDGGSGNDTLAGGEGSDTLKGGSDDDE 744
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
L A ++ L + D GKD ++ D+ ++ +DL +
Sbjct: 745 LIGGAGNDYLNGSSGDDVLNGGSGKDRLYLGAGDDHASGGADADRFIFRNEDLDGSTDTI 804
Query: 503 RGAAAR 508
+
Sbjct: 805 TDFSLS 810
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/293 (13%), Positives = 74/293 (25%), Gaps = 15/293 (5%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + + G++G+D + G + S DV +G G D + +
Sbjct: 487 SYDDDLSGNAGSDALYGGIGTDTLTGGSSGDVLEGDDGNDLL-----HGGAGVGANSGIV 541
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
YD + + D +V + + L +A ++ L G D+ +
Sbjct: 542 SQYDEDGVRYDQFGNV----LTEDDDSLFGGQGDDHLMGSAGHDMLDGGAGDDLLDGGSG 597
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
F +G D + + + G + L
Sbjct: 598 FDILIGGQGNDTLRGGSEADTLRGEGGHDVMDGGSGNDEIFGGIGDDQIDGGSGADVLNG 657
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
++ L D G D S + G + G
Sbjct: 658 GDGNDSLSGRSGDDFLSGDDGNDTLSGGSGNDDLDGGVGDDSLSGGSGSDTVIGGLGSDT 717
Query: 506 AARHYITH------GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G + L A ++ L + D +GKD
Sbjct: 718 LDGGSGNDTLAGGEGSDTLKGGSDDDELIGGAGNDYLNGSSGDDVLNGGSGKD 770
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 82/281 (29%), Gaps = 22/281 (7%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEI-GHALGLMHPGSYNGGYPVYGVDNDYE 154
F + + D G G ++ + G A + G + G ND
Sbjct: 551 YDQFGNVLTEDDDSLFGGQGDDHLMGSAGHDMLDGGAGDDLLDGGSGFDILIGGQGNDTL 610
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK 214
+ D M S + D + GA + G+
Sbjct: 611 RGGSEADTLRGEGGHDVMDGGSGNDEIFGGIGDDQ-IDGGSGADVLNGGD----GNDSLS 665
Query: 215 DSPFIQTIYDSGGDDLLD--------------LTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ G+D L +L GG + + ++ G N
Sbjct: 666 GRSGDDFLSGDDGNDTLSGGSGNDDLDGGVGDDSLSGGSGSDTVIGGLGSDTLDGGSGND 725
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T+A +++ G S +D +IG + N+ SSG+DV +G SG D + +
Sbjct: 726 TLAGGEGSDTLKGGSDDDELIGGAGNDYLNGSSGDDVLNGGSGKDRLYL--GAGDDHASG 783
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+A NE + +D + +
Sbjct: 784 GADADRFIFRNEDLDGSTDTITDFSLSDGDLLDLRGLNLDS 824
>gi|158338800|ref|YP_001519977.1| hemolysin-type calcium-binding repeat-containing protein
[Acaryochloris marina MBIC11017]
gi|158309041|gb|ABW30658.1| Hemolysin-type calcium-binding repeat, putative [Acaryochloris marina
MBIC11017]
Length = 1054
Score = 80.2 bits (196), Expect = 9e-13, Method: Composition-based stats.
Identities = 46/377 (12%), Positives = 96/377 (25%), Gaps = 49/377 (12%)
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL-TSVMSYFMPQDSMMDASFGYCATP 183
H I G+ S + G+ + D S + G P
Sbjct: 695 AHAIAVEKGVTKEFSDHYGFSFTDNSGPFYEDYMQLFSALHVVDNNALDNIGGGGTPRAP 754
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+ D P +GN + + G+DL+
Sbjct: 755 LAPDFDVA-----PPPAFIGNAD---SNNLEGDDQANRMDGKAGNDLI------------ 794
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L I G T+ + ++G + +D ++G N+ + D +G G
Sbjct: 795 -LGRGGHDFITGGSGRDTLDGGKGNDHLIGDTSSDHLLGGDGNDYLDGGAYGDTLEGGDG 853
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHK------------QDFLSDVERLRFAD--- 348
D + + V ++++ D L +E + +
Sbjct: 854 DDHL--TGGTGKDRFMGGAGFDTVIESDDIDFELTKNKLIGTWTDTLDSIEHVILSGGDS 911
Query: 349 ----------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + L + L+ G D F + +
Sbjct: 912 NNKLDASQFQGTVHLNGGEGHDQLIGGQQGDVLVSSSGNDSLTGGAGTDTFDVVGRVEFL 971
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+ + + ++ + + A Y+ ++ D I AD
Sbjct: 972 QSNRSTPLKTGEFALINDFNKDKDTLILLGSAQQYVVGISNIGAEIYLDTNGDGITTQAD 1031
Query: 459 APDLVQVGKDHFSNFGC 475
+ G + F+ G
Sbjct: 1032 EIVAIIKGSNSFNLDGS 1048
>gi|257486705|ref|ZP_05640746.1| Poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3)
[Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 751
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/412 (12%), Positives = 109/412 (26%), Gaps = 33/412 (8%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL +S + + ++ G+S +D ++G++ N+V G D G G
Sbjct: 342 DLGFRGDASDNNDPAAIFESGQNEGGNIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDG 401
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L I+ ++++
Sbjct: 402 NDIYVVDNALDTVTESNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVI 461
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRG 420
AS L G D+ + + + R + ++ +G D + + S
Sbjct: 462 TGNASNNVLDGAAGADLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTL 521
Query: 421 AAARH---YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
A G + A + + +
Sbjct: 522 GANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTS 581
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF---KALEYIASHE 534
+ + GS G + L + ++
Sbjct: 582 AQ----------------QATGGSGLDTLKGTENLTGSQFADTLTGNKNANVLNGGSGND 625
Query: 535 DLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHY 594
L D + +G D + G FN + D + AA
Sbjct: 626 TLSGGAGDDVLIGGSGAD--TLIGGTGADRYVFNNSN--ETGLDGLRDIINGFKAAEGDK 681
Query: 595 ITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ + R L + F + N + + + +L LY + +
Sbjct: 682 LDFTGFDARPLTDAHDAFVFIGNAAFSANNTGELRF----ADGVLYGNLDDN 729
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/363 (14%), Positives = 102/363 (28%), Gaps = 51/363 (14%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
V ++ AD + D+ +TE N + + S +
Sbjct: 386 VLDGDQGADDMTGGD---------GNDIYVVDNALDTVTESNDS-PSQVDTVVSSVSWQL 435
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
E + + N ++ + AD+ G G +
Sbjct: 436 GANVENLLLTGVSAINGTGNALKNVITGNASNNVLDGAAGADLLTGGDGSDSY------- 488
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
Y +D+ V + Q +D A+ +
Sbjct: 489 --------------------------YVDDAADRVVETNADQQVGGIDTVLSSLASYTLG 522
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+ I G + N ++ + G+D + L + LN
Sbjct: 523 ANLENIVITGTGAANATGNT--LDNLIYAGAGDNVMDGRDGNDTVSY-LFATAGVTVALN 579
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T + + GG + E++ GS D + GN NV SGND G +G D
Sbjct: 580 TSAQQATGGS----GLDTLKGTENLTGSQFADTLTGNKNANVLNGGSGNDTLSGGAGDDV 635
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + + ++NE D L D+ F D ++ T
Sbjct: 636 LIGGSGADTLIGGTGADRYVFNNSNETGLDGLRDI-INGFKAAEGDKLDFTGFDARPLTD 694
Query: 367 SYE 369
+++
Sbjct: 695 AHD 697
>gi|307592035|ref|YP_003899626.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
gi|306985680|gb|ADN17560.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
Length = 1744
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/349 (16%), Positives = 96/349 (27%), Gaps = 52/349 (14%)
Query: 252 SIGGYEKNMTIAQHTVIES---VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
I G N TI +E+ V G GND + N+ GND +G G +T
Sbjct: 898 VIKGLAGNDTIQFINGVEAPGQVRGGDGNDNITTGKGNDFIDGGQGNDTLNGGEGNNTAD 957
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
Y ++ QD LS+++ + + + + ++ L A
Sbjct: 958 YSNSPNGVRVNLNSGFASNDGYGT--QDNLSNIQNVEGSAKNDVIIGSNTKNYLNGGAGN 1015
Query: 369 ----------EDLIQVIGQDVFESMKHFY---EFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ ++ G D F F G + + +LG+
Sbjct: 1016 DDLEGLDGDDDVILGGEGADTIRGGNGFDVTTYFDSKSGILVNLSNQTFLGNVTLPD--- 1072
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
G H G +G D + + A + LI D +G D
Sbjct: 1073 GVSPLYITAHRGQGGSADGDFIDGIENVSGSAYDDILIARDGDGIIDGWLGNDIIYAGSG 1132
Query: 476 EEGRFVTF--DSYLYLGSYD-------DLRNVFGSDRGAAARHYI--------------- 511
+ D Y S D G G + +
Sbjct: 1133 HDTLIGGDGSDWLSYKLSNAGVNVNLKDNAFSGGYAEGDKLQTIVYDSSSGKGTPQEGNS 1192
Query: 512 -------THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ E R D + ++ +++ + AG DH
Sbjct: 1193 FENLEGSLYSDGELRGDDNNNLIRGLSGDDNIYGEGGNDLLNGGAGADH 1241
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/339 (13%), Positives = 92/339 (27%), Gaps = 52/339 (15%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-GYEKNMTIA 263
K T+ G++ D + ++LN+ S+ G G + N+
Sbjct: 930 TTGKGNDFIDGGQGNDTLNGGEGNNTADYSN-SPNGVRVNLNSGFASNDGYGTQDNL--- 985
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGN-------------------DVFDGSSGL 304
+ I++V GS+ NDV+IG++ N +GN D G +G
Sbjct: 986 --SNIQNVEGSAKNDVIIGSNTKNYLNGGAGNDDLEGLDGDDDVILGGEGADTIRGGNGF 1043
Query: 305 DTFFYYAPSYLYKI----YRFENAIIVYD-------------ANEHKQDFLSDVERLRFA 347
D Y+ + F + + D DF+ +E + +
Sbjct: 1044 DVTTYFDSKSGILVNLSNQTFLGNVTLPDGVSPLYITAHRGQGGSADGDFIDGIENVSGS 1103
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ I++ + + G D +
Sbjct: 1104 AYDDILIARDGDGIIDGWLGNDIIYAGSGHDTLIGGDGSDWLSYKLSNAGVNVNLKDNAF 1163
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS------HEDLINAFADAPD 461
+EG + + + Y + +LI + +
Sbjct: 1164 SGGYAEGDKLQTIVYDSSSGKGTPQEGNSFENLEGSLYSDGELRGDDNNNLIRGLSGDDN 1223
Query: 462 LVQVGKDHFSNFGCEE---GRFVTFDSYLYLGSYDDLRN 497
+ G + N G D+ YL S +
Sbjct: 1224 IYGEGGNDLLNGGAGADHLDGGTGEDTVTYLESTGAVYA 1262
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 77/270 (28%), Gaps = 33/270 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ G D L DL+ + + SS Y I+
Sbjct: 1394 GNDFVDGGGGNDLLDGDRGIDTLSDDLSNKTQNISLESFDITQESSKSYYIDGTNISNFE 1453
Query: 267 VIESVVGSSGNDVVI-GNSANNVFFESSGNDVFDGSSGLDTF------------------ 307
+ + + SGND + + NN F +G D +G G D+
Sbjct: 1454 IFKDIKTGSGNDRLTQLDRINNNFSTGAGADTVNGGLGFDSVDGGKDTVFLPDLGEIELP 1513
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFL------SDVER-----LRFAD-QCIDSVN 355
Y + + +I++ E K + +++E + F++ +
Sbjct: 1514 VIDTLVVDYSVGDTGSGMIMFVTPEDKTGYAYRSIDPNNIEASLLDSIDFSNFENYQVTG 1573
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ + + +I G D S EG D+ S D L
Sbjct: 1574 TSKEDTIVLGNGNDSIIANAGNDYLRSNGGNDYINAGEGNDVLIGSNQTSADIDTLEGGA 1633
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEY 445
G+D ++ + D +Y
Sbjct: 1634 GADLFLLGESFVAGTNLDPHFYDKAGTNDY 1663
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 64/368 (17%), Positives = 103/368 (27%), Gaps = 44/368 (11%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + I +N +E DV G G TI N +
Sbjct: 989 QNVEGSAKNDVIIGSNTKNYLNGGAGNDDLEGLDGDDDVILGGEGADTIRGGNGFDVTTY 1048
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY--CATPMVSDI 188
G + S L + D G + DI
Sbjct: 1049 FDSKSGILVNLSNQTFLGNVTLPDGVSPLYITAHRGQGGSADGDFIDGIENVSGSAYDDI 1108
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ + G G LGN+I T+ G D L L N ++L
Sbjct: 1109 LIARDGDGIIDGWLGNDI------IYAGSGHDTLIGGDGSDWLSYKLSNAGVN-VNLKDN 1161
Query: 249 SWSSIGGYEKNM-TIAQ-----------HTVIESVVGS-------------------SGN 277
++S + TI E++ GS SG+
Sbjct: 1162 AFSGGYAEGDKLQTIVYDSSSGKGTPQEGNSFENLEGSLYSDGELRGDDNNNLIRGLSGD 1221
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + G N++ +G D DG +G DT Y + N DA D
Sbjct: 1222 DNIYGEGGNDLLNGGAGADHLDGGTGEDTVTYLESTGAVYADLLFNQGFFADAQG---DT 1278
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG-QDVFESMKHFYEFGLSEGRD 396
S+VE L ++ + + ++ + S L V G + + EG +
Sbjct: 1279 FSNVEDLTGSNYGDNLNGDNGNNKIDPSLSGSQLDIVDGRGGTDTLLVDYSIDDYGEGIE 1338
Query: 397 ITFDSYLY 404
F++
Sbjct: 1339 GGFNTGDI 1346
Score = 44.8 bits (104), Expect = 0.044, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 44/153 (28%), Gaps = 6/153 (3%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + T D G + + +D S +N + +
Sbjct: 1522 YSVGDTGSGMIMFVTPEDKTGYAYRSIDPNNIEASLLD------SIDFSNFENYQVTGTS 1575
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++V +GND +I N+ N+ + GND + G D + A
Sbjct: 1576 KEDTIVLGNGNDSIIANAGNDYLRSNGGNDYINAGEGNDVLIGSNQTSADIDTLEGGAGA 1635
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
++++ + + +
Sbjct: 1636 DLFLLGESFVAGTNLDPHFYDKAGTNDYALITD 1668
>gi|221634587|ref|YP_002523275.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
KD131]
gi|221163460|gb|ACM04422.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
KD131]
Length = 965
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 71/251 (28%), Gaps = 13/251 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS---------GNDVFDGSS 302
++ G N + E + G GND + G N++ + G D G +
Sbjct: 711 TLRGSGGNDRLIGTANAERIEGFGGNDRIEGRGGNDLLSGGAGNDLLDGGGGRDRMVGGT 770
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSI 361
G D + I + ++VERL S ++
Sbjct: 771 GNDRYIVNQ--AGDSTIELAGGGIDTVQSSLSWTLAANVERLVLTGGAALSGTGNGLSNL 828
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD-ITFDSYLYLGSYDDLRNVFGSDRG 420
L L G D GRD F++ G+ D + + +D
Sbjct: 829 LIGNGGANRLSGGAGNDTLSGGGGADLLIGGAGRDSFVFNTRPGPGAIDRIADFNVADDV 888
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ + G+ G A A D + D + D G +
Sbjct: 889 IHLENAVFRGLPAGALRGAAFASNLSGQATDAADRILYERDTGALWFDADGTGGGARVQI 948
Query: 481 VTFDSYLYLGS 491
T + L L +
Sbjct: 949 ATLSAGLALTA 959
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 36/116 (31%), Gaps = 11/116 (9%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG--- 276
+ G+D + + I+L ++ T+A + + G +
Sbjct: 764 DRMVGGTGNDRYIV--NQAGDSTIELAGGGIDTVQSSLS-WTLAANVERLVLTGGAALSG 820
Query: 277 -----NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++++IGN N +GND G G D A + +
Sbjct: 821 TGNGLSNLLIGNGGANRLSGGAGNDTLSGGGGADLLIGGAGRDSFVFNTRPGPGAI 876
Score = 46.7 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 35/133 (26%), Gaps = 11/133 (8%)
Query: 518 GRNPDAFKALEYIASHED---LINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLT 574
+ + + L + G D G S FN
Sbjct: 817 ALSGTGNGLSNLLIGNGGANRLSGGAGNDTLSGGGGAD--LLIGGAGRDSFVFNTRPGPG 874
Query: 575 SYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDH 634
+ D + + +D ++ + G+ G G + + A + ++
Sbjct: 875 AIDRIADFNVADDVIHLENAVFRGLPAGALRG------AAFASNLSGQATDAADRILYER 928
Query: 635 KKVDLYTDYFGDG 647
L+ D G G
Sbjct: 929 DTGALWFDADGTG 941
>gi|15485210|emb|CAC67456.1| adenylate cyclase hemolysin [Bordetella bronchiseptica]
Length = 850
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 59/492 (11%), Positives = 119/492 (24%), Gaps = 63/492 (12%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S D+ + G TI + LGL +G D
Sbjct: 282 GSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDDETV 341
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D + + + + + + G Y
Sbjct: 342 SDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMGYYDSVRSV 401
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
++ IG + + +++ G + T+ + + G
Sbjct: 402 ENV-------------------IGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFG 442
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----- 328
GND++ G++ N+ + G+D +G +G D F + V
Sbjct: 443 GDGNDMLYGDAGNDTLYGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAG 502
Query: 329 ---------------------------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+A D +S +E + + Q ++
Sbjct: 503 AHAGVATGRIGLGILADLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANV 562
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L + L G DV + + GRD + + D N
Sbjct: 563 LRGAGGADVLAGGEGDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANA------- 615
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ + G + A + + + + + + E
Sbjct: 616 --GNLLDGGDGNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPETSNVLRHIENAVG 673
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
+ + + D + G + L A ++DL
Sbjct: 674 SVRDDVLI---GDAGANVLNGLAGNDVLSGGAGDDVLLGDEGSDLLSGDAGNDDLFGGQG 730
Query: 542 DAPDLVQAGKDH 553
D L AG H
Sbjct: 731 DDTYLFGAGYGH 742
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 93/374 (24%), Gaps = 38/374 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYN 141
+ T D D+ G G + + LG L +
Sbjct: 415 GDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTLYGGLGDDTLEGGAGND 474
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++D + Y A+ +++D+ A + GS
Sbjct: 475 WFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLG-ILADLGAGRVDKLGEAGS 533
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + I G + + + G E +
Sbjct: 534 SAYDTVSGIENVVGTELADRI-------------TGDAQANVLRGAGGADVLAGGEGDDV 580
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS------ 313
+ + + G +G D + G + ++ FF+ + N ++ DG G DT + P
Sbjct: 581 LLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGNDTVDFSGPGRGLDAG 640
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ L +E + + + ++L A + L
Sbjct: 641 AKGVFLSLGKGFASLMDEPETSNVLRHIENAVGSVRDDVLIGDAGANVLNGLAGNDVLSG 700
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G DV + G D DL G D Y + E
Sbjct: 701 GAGDDVLLGDEGSDLLSGDAGND-------------DLFGGQGDDTYLFGAGYGHDTIYE 747
Query: 434 GRNPDAFKALEYIA 447
+ A
Sbjct: 748 SGGGHDTIRINAGA 761
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 41/365 (11%), Positives = 73/365 (20%), Gaps = 60/365 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N +IA + G GND + G +++ G D G G D F
Sbjct: 279 NLHGSSLNDSIAGDDRDNELWGDDGNDTIHGRGGDDILRGGLGLDTLYGEDGNDIFLQDD 338
Query: 312 PSYLYKIYRFENAIIVYDA---------------------------------NEHKQDFL 338
+ I V + D +
Sbjct: 339 ETVSDDIDGGAGLDTVDYSAMIHAGKIVAPHEYGFGIEADLSEGWVRKAARRGMGYYDSV 398
Query: 339 SDVERLRFAD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
VE + Q + + + L G D+
Sbjct: 399 RSVENVIGTSMKDVLIGDAQANTLMGQGGDDTVRGGDGDDLLFGGDGNDMLYGDAGNDTL 458
Query: 390 GLSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ H
Sbjct: 459 YGGLGDDTLEGGAGNDWFGQTPAREHDVLRGGAGVDTVDYSQAGAHAGVATGRIGLGILA 518
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ A D + + G ++ + + + G+ G
Sbjct: 519 DLGAGRVDKLGEAGSSAYDTVSGIENVVGTELADRITGDAQANVLRGAGGADVLAGGE-- 576
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G + L A + L D A G +
Sbjct: 577 ----------GDDVLLGGEGDDQLSGDAGRDRLYGEAGDDWFFQDAANAGNLLDGGDGND 626
Query: 564 SITFN 568
++ F+
Sbjct: 627 TVDFS 631
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 28/183 (15%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV------KNYIDLNTESWSSIGGYE 257
+ + + + G+D +D + G ++ L S + E
Sbjct: 604 GDDWFFQDAANAGNLLD---GGDGNDTVDFSGPGRGLDAGAKGVFLSLGKGFASLMDEPE 660
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + IE+ VGS +DV+IG++ NV +GNDV G +G D
Sbjct: 661 TSNVLRH---IENAVGSVRDDVLIGDAGANVLNGLAGNDVLSGGAGDD--VLLGDEGSDL 715
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ ++ +I E ++ + G
Sbjct: 716 LSGDAGNDDLFGGQGDDTYLF--------------GAGYGHDTIYESGGGHDTIRINAGA 761
Query: 378 DVF 380
D
Sbjct: 762 DQL 764
Score = 37.5 bits (85), Expect = 7.4, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 21/93 (22%)
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + D L V+ + + L A + L G D +
Sbjct: 138 ELARVGQLVEVDTLEHVQHIIGGAGNDSITGNAHDNFLAGGAGDDRLDGGAGNDTLVGGE 197
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
G D+ + D +
Sbjct: 198 GHNTVVGGAGDDVFLQDLGVWSNQLDGGAGVDT 230
>gi|319638111|ref|ZP_07992875.1| hypothetical protein HMPREF0604_00498 [Neisseria mucosa C102]
gi|317400756|gb|EFV81413.1| hypothetical protein HMPREF0604_00498 [Neisseria mucosa C102]
Length = 850
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 8/160 (5%)
Query: 198 PKGSLGNNIYKIEVQ--QKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
++I E + + I+ G+D L D + G + I
Sbjct: 639 NGTHADDHIKGTESEDIIYGNRGNDEIHGGSGNDKLSSGTGDDVINGDAGSDILYGGGGN 698
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N T+ ++++G +GND++ G + N+ F G+D+ G +G DT+ +
Sbjct: 699 DHLNGGLDNDTLYGGAGNDTLLGEAGNDILHGGAGNDTLFGGLGDDILRGEAGNDTYVFN 758
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
I+ + LS +E ++ D
Sbjct: 759 RGEGHDTIFDHHGTNAIQFGAGISLSDLS-LETVKEKDGT 797
Score = 68.3 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 47/169 (27%), Gaps = 10/169 (5%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
++ T + I G E I + + + G SGND + + ++V
Sbjct: 627 VSQTFADGKTTFNGTHADDHIKGTESEDIIYGNRGNDEIHGGSGNDKLSSGTGDDVINGD 686
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+G+D+ G G D +Y + E D L
Sbjct: 687 AGSDILYGGGGNDHL--NGGLDNDTLYGGAGNDTLL--GEAGNDILHG------GAGNDT 736
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
IL A + + G+ H + G I+
Sbjct: 737 LFGGLGDDILRGEAGNDTYVFNRGEGHDTIFDHHGTNAIQFGAGISLSD 785
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 40/177 (22%), Gaps = 33/177 (18%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+ +D + G + ++ + + GND G SG D
Sbjct: 637 TFNGTHADDHIKGTESEDIIYGNRGNDEIHGGSGNDKL-------------SSGTGDDVI 683
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ D L L + L G D
Sbjct: 684 NGDAGSDIL---------------YGGGGNDHLNGGLDNDTLYGGAGNDTLLGEAGNDIL 728
Query: 390 GLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
G D F D D G H+ T+ ++ G
Sbjct: 729 HGGAGNDTLFGGLGDDILRGEAGNDTYVFNRGEGHDTIFDHHGTNAIQFGAGISLSD 785
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 35/140 (25%), Gaps = 1/140 (0%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
FAD ++ T S + + G D + G D+
Sbjct: 630 TFADGKTTFNGTHADDHIKGTESEDIIYGNRGNDEIHGGSGNDKLSSGTGDDVINGDAGS 689
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
Y N + Y G L A ++ L D +
Sbjct: 690 DILYGGGGNDHLNGGLDNDTLYGGAGNDTLLGEAGNDILHGGAGNDTLFGGLGDDILRGE 749
Query: 465 VGKDHFSNFGCEEGRFVTFD 484
G D + F EG FD
Sbjct: 750 AGNDTYV-FNRGEGHDTIFD 768
Score = 37.5 bits (85), Expect = 6.7, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 43/172 (25%), Gaps = 12/172 (6%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
+ D + L + + + + + + Y D I+
Sbjct: 609 PSLDVWDMLYVSNLGQASVSQTFADGKTTFNGTHADDHIKGTESEDIIYGNRGNDEIHGG 668
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
+ L D N LY G +D N + Y G
Sbjct: 669 SGNDKLSSGTGDDVINGDAGS-------DILYGGGGNDHLNGGLDNDTL----YGGAGND 717
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
L A ++ L D +AG D + F EG F+
Sbjct: 718 TLLGEAGNDILHGGAGNDTLFGGLGDDILRGEAGNDTYV-FNRGEGHDTIFD 768
>gi|261393044|emb|CAX50636.1| FrpA/C protein [Neisseria meningitidis 8013]
Length = 1071
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/260 (16%), Positives = 86/260 (33%), Gaps = 15/260 (5%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 707 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 766
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM------ 184
+ + + ++ + D S Y +
Sbjct: 767 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 826
Query: 185 VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
V D+ V+++ + + G++ Y+ +Y + GDDLL+ G N
Sbjct: 827 VLDVATVKEL--VQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDAGN 880
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ ++ G E N + + +++ G+ GND + G N+ +GND +G
Sbjct: 881 DSIYSGNGNDTLDGGEGNDALYGYNGNDALNGAEGNDHLNGEDGNDTLIGGAGNDYLEGG 940
Query: 302 SGLDTFFYYAPSYLYKIYRF 321
SG DT+ + +Y +
Sbjct: 941 SGSDTYVFGEGFGQDTVYNY 960
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 76/288 (26%), Gaps = 60/288 (20%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 712 GHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 771
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV- 354
+ V ++ ++ + F + + V
Sbjct: 772 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 831
Query: 355 --------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L S L +G D G D +Y G
Sbjct: 832 TVKELVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLNGDAGND-----SIYSG 886
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ +D + + Y +G + L ++ LI + G
Sbjct: 887 NGNDTLDGGEGNDAL----YGYNGNDALNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 942
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
D + EG ++ D AA H+I G
Sbjct: 943 SDTYVFG---EGFGQDTVYNYHVDKNSDTM--HFKGFKAADVHFIRSG 985
>gi|149187074|ref|ZP_01865380.1| Animal haem peroxidase [Erythrobacter sp. SD-21]
gi|148829285|gb|EDL47730.1| Animal haem peroxidase [Erythrobacter sp. SD-21]
Length = 2138
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 69/524 (13%), Positives = 117/524 (22%), Gaps = 72/524 (13%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ S +D I S++ + D + + L
Sbjct: 1425 DVSGITDANGIVSSSIQWQVSSNGVDWVDVAGATGPDFTPEDLAGTAFGAQAGLF----- 1479
Query: 132 LGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L G V D + G A + +
Sbjct: 1480 LRAAFMYEDGLGFDNVLYSAMTQPVGVNWEGDGLVNFIGTGGDDIAVGSAAGENLWGMEG 1539
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK---------- 240
+ G L N + D+ GD +L+ G
Sbjct: 1540 SDNLSGGAGNDLLNGGVGADTTSGGLGNDDHHVDNAGDVVLEAVGEGTNDRVLSSATYVL 1599
Query: 241 --------------NYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
IDL + + G ++ + V G +G+D V G
Sbjct: 1600 NAGAEIEVLVAKGSADIDLTGNEFDNVVWGNAGANSVDGADGNDRVFGLAGDDTVEGGDG 1659
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER-- 343
++ F +G DV DG G DT + + I + + + E
Sbjct: 1660 DDELFGGAGVDVSDGGLGNDT-HHIQNAGDTVIEGVGQGDLDIVRSSVSWALTAGAEVEV 1718
Query: 344 -LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
ID + + + A L + G DV EG D F
Sbjct: 1719 MFAKGSGNIDLAGNEFNNTIWGNAGMNVLSGLEGDDVLFGAGAADMLFGGEGNDQLFGGV 1778
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
D + G D N E + D + +
Sbjct: 1779 A----ADTMDGGLGDDII-------------HVNNAGDVVEEAVGEGFDQVGTTVNYVLT 1821
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
+ F G + A + +G +
Sbjct: 1822 AGAEVEVFFAKGSGDINLTGN--------------------SLANSIWGNNGANTLQGGA 1861
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ A + + + G D F G +GR
Sbjct: 1862 GDDVIGGGAGDDTIRGGLGNDTLYGVDGNDLFEQRGALDGRDFV 1905
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/303 (12%), Positives = 85/303 (28%), Gaps = 46/303 (15%)
Query: 73 TSIHSDIKFISS-------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+DI + N + D G G + +
Sbjct: 1610 AKGSADIDLTGNEFDNVVWGNAGANSVDGADGNDRVFGLAGDDTVEGGDGDDELFGGAGV 1669
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
LG N G V + D +SV + + +
Sbjct: 1670 DVSDGGLGNDTHHIQNAGDTVIEGVGQGDLDIVRSSVS---WALTAGAEVEVMFAKGSGN 1726
Query: 186 SDIVAVQK---IYGAPKGSL-----GNNIYKI------------EVQQKDSPFIQTIYDS 225
D+ + I+G ++ G+++ Q T+
Sbjct: 1727 IDLAGNEFNNTIWGNAGMNVLSGLEGDDVLFGAGAADMLFGGEGNDQLFGGVAADTMDGG 1786
Query: 226 GGDDLLDL------------TLIGGVKNYID--LNTESWSSIG--GYEKNMTIAQHTVIE 269
GDD++ + V ++ L + + ++ + +++
Sbjct: 1787 LGDDIIHVNNAGDVVEEAVGEGFDQVGTTVNYVLTAGAEVEVFFAKGSGDINLTGNSLAN 1846
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+ G++G + + G + ++V +G+D G G DT + + L++ + +
Sbjct: 1847 SIWGNNGANTLQGGAGDDVIGGGAGDDTIRGGLGNDTLYGVDGNDLFEQRGALDGRDFVN 1906
Query: 330 ANE 332
Sbjct: 1907 GGA 1909
Score = 41.7 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 47/143 (32%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G++G+D +I ++ + +GND +G G+D A + + + I D
Sbjct: 960 TINGTAGDDTIIAGGGDDGIWGGAGNDRIEGGHGVDLIIAGAGNDIVTDSGDSDDFIKGD 1019
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + ++ L D + + + + ++ D +
Sbjct: 1020 EGDDVIANSNGLDVLMGGDGKDAFIVGVDTTEVFGGEGDDFILGGEDADFLLGNEGDDWI 1079
Query: 390 GLSEGRDITFDSYLYLGSYDDLR 412
G D T L +
Sbjct: 1080 EGGGGFDTTAGDNSELFFNSTII 1102
>gi|251825712|gb|ACT20906.1| protease [Enterococcus sp. RSC]
Length = 123
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 41/120 (34%), Gaps = 10/120 (8%)
Query: 56 RWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINF--DK 106
+ +L W+ V ++ F + N + P + + +
Sbjct: 4 QLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPDALKGQSWYLINS 63
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY 165
+ G HEIGH LGL HPG YN G D Y D+ SVMSY
Sbjct: 64 SYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAEDTRAYSVMSY 123
>gi|4104351|gb|AAD02005.1| S-layer-RTX protein [Campylobacter rectus]
Length = 1123
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 59/196 (30%), Gaps = 15/196 (7%)
Query: 211 VQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + I GGDD++ D + G N I E + G + I
Sbjct: 506 DYIQGTQEADIIRAKGGDDVIYGNGGDDEIYGDEGNDIIHGNEGADKLFGGAGDDAIYGG 565
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+++ G+ G D + GN ++ G+D+ G G DT + I+ E
Sbjct: 566 EGNDTIEGNEGKDKIYGNDGDDTIKGGEGDDILKGEGGNDTIY--GEGGKDNIFGNEGDD 623
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
I+ + ++ + L + + G D K
Sbjct: 624 ILKGGGDDD--------KIYGGEGKDTIDGEAGNDTLYGNDGDDTIDGGEGNDEIYGHKG 675
Query: 386 FYEFGLSEGRDITFDS 401
EG D +
Sbjct: 676 KDTLKGGEGDDKIYGE 691
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 81/467 (17%), Positives = 139/467 (29%), Gaps = 43/467 (9%)
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
P D+ Y +AD+ R G I + EI G G ++
Sbjct: 497 AATEPTDDADYI--QGTQEADIIRAKGGDDVIYGNGGDDEIYGDEGNDIIHGNEGADKLF 554
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
G D Y + ++ + G KIYG + G++
Sbjct: 555 GGAGDDA---------IYGGEGNDTIEGNEGK------------DKIYG----NDGDDTI 589
Query: 208 K---IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
K + K TIY GG D + G + I I G E TI
Sbjct: 590 KGGEGDDILKGEGGNDTIYGEGGKDNI----FGNEGDDILKGGGDDDKIYGGEGKDTIDG 645
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G+ G+D + G N+ + G D G G D + L +
Sbjct: 646 EAGNDTLYGNDGDDTIDGGEGNDEIYGHKGKDTLKGGEGDDKIYGELSDTLLDGGEGVDT 705
Query: 325 IIV----YDANEHKQDFLSDVERLRFADQCIDSV---NVKQRSILEYTASYEDLIQVIGQ 377
+I+ D N + D + + E L ++ N+ ++I + T++ + ++++ G
Sbjct: 706 LILEDKEIDFNTLQADAIKNFEILDLGSGNSNAATLRNLSPQNISKLTSNKDTILKINGD 765
Query: 378 DV-FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + F + G D ++ Y L +L V A
Sbjct: 766 DKDIAVLSGFTASADTNGLDANYNRYEGLNDKGELVKVDIKKSIKTAFLSDQPTDNADYI 825
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
A A D + + D G D +G + Y D
Sbjct: 826 QGTQGADIIRAKGGD-DIVYGNDGDDTIYGNDGNDALYGGKGEDKLYGGADNDVIYGDEG 884
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
+ Y G E + +E A + + D
Sbjct: 885 DDTIYGNEGNDTLYGGDGDDEIYGGEGNDEIEGGAGNNTIYGNEGDD 931
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/408 (12%), Positives = 104/408 (25%), Gaps = 32/408 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D +G D+ D D+ G TI +I L
Sbjct: 317 TGGDGNDTIYGDGGDDEIMGDAGDDTLYGGDGNDIIFGNGGNDTIYGGKGNDKIYGELND 376
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD-SMMDASFGYCATPMVSDIVAVQK 193
G + + + + + + F D + +++ +
Sbjct: 377 KLLDGGEGIDALLLTGSQIDLGAVQKNKIKNFEILDLNKGSYIGMVLKNLTPQNVLNITS 436
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT---ESW 250
G N + + +K + T + + G +D+ +
Sbjct: 437 NKDTILKISGGNKDTVILDKKFTASADTSGLDANYNRYEGLNDKGELIKVDIEKSIKTVF 496
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ + I + + G+DV+ GN ++ + GND+ G+ G D F
Sbjct: 497 AATEPTDDADYIQGTQEADIIRAKGGDDVIYGNGGDDEIYGDEGNDIIHGNEGADKLF-- 554
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ IY E + + ++ +
Sbjct: 555 GGAGDDAIYGGEGNDT-----------------IEGNEGKDKIYGNDGDDTIKGGEGDDI 597
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHY 426
L G D +EG DI D +Y G D + + Y
Sbjct: 598 LKGEGGNDTIYGEGGKDNIFGNEGDDILKGGGDDDKIYGGEGKDTIDGEAGNDTL----Y 653
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
G + + Y +D + + D + G
Sbjct: 654 GNDG-DDTIDGGEGNDEIYGHKGKDTLKGGEGDDKIYGELSDTLLDGG 700
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 50/338 (14%), Positives = 98/338 (28%), Gaps = 8/338 (2%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D G +++D I G E I +++ G G+D ++G++ +
Sbjct: 282 GTDKKDFIDAKGGNDFVD-GLGGDDEIYGGEGKDRITGGDGNDTIYGDGGDDEIMGDAGD 340
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ + GND+ G+ G DT + KIY N ++ L+ +
Sbjct: 341 DTLYGGDGNDIIFGNGGNDTIY--GGKGNDKIYGELNDKLLDGGEGIDALLLTGSQIDLG 398
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF--GLSEGRDITFDSYLY 404
A Q N + + + + L + Q+V + +D +
Sbjct: 399 AVQKNKIKNFEILDLNKGSYIGMVLKNLTPQNVLNITSNKDTILKISGGNKDTVILDKKF 458
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKE-GRNPDAFKALEYIASHEDLINAFADAPDLV 463
S D +R + ++ A D I +A +
Sbjct: 459 TASADTSGLDANYNRYEGLNDKGELIKVDIEKSIKTVFAATEPTDDADYIQGTQEADIIR 518
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
G D + + + + +FG A Y G +
Sbjct: 519 AKGGDDVIYGNGGDDEIYGDEGNDIIHGNEGADKLFGGAGDDAI--YGGEGNDTIEGNEG 576
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
+ + + D + G D G ++
Sbjct: 577 KDKIYGNDGDDTIKGGEGDDILKGEGGNDTIYGEGGKD 614
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 55/463 (11%), Positives = 100/463 (21%), Gaps = 54/463 (11%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
NG D + + AD G G I I G +G
Sbjct: 527 YGNGGDDEIYGDEGNDIIHGNEGADKLFGGAGDDAIYGGEGNDTIEGNEGKDKIYGNDGD 586
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ G + D + Y + + G D KIYG
Sbjct: 587 DTIKGGEGDDILKGEGGNDTIYGEGGKDNIFGNEGDDILKGGGDD---DKIYGGEGKDTI 643
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + TI G+D + G E I G + +
Sbjct: 644 DGEAG-NDTLYGNDGDDTIDGGEGNDEI----YGHKGKDTLKGGEGDDKIYGELSDTLLD 698
Query: 264 QHTVIESVV--------------------------GSSGNDVVIGNSANNVFFESSGNDV 297
+++++ G+S + S N+ +S D
Sbjct: 699 GGEGVDTLILEDKEIDFNTLQADAIKNFEILDLGSGNSNAATLRNLSPQNISKLTSNKDT 758
Query: 298 F--DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS---------------- 339
D + + Y+ K + +
Sbjct: 759 ILKINGDDKDIAVLSGFTASADTNGLDANYNRYEGLNDKGELVKVDIKKSIKTAFLSDQP 818
Query: 340 --DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ + ++ I+ + + G D K + D+
Sbjct: 819 TDNADYIQGTQGADIIRAKGGDDIVYGNDGDDTIYGNDGNDALYGGKGEDKLYGGADNDV 878
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
+ Y + N Y G E + +++
Sbjct: 879 IYGDEGDDTIYGNEGNDTLYGGDGDDEIYGGEGNDEIEGGAGNNTIYGNEGDDNIYGGGD 938
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
D G D + + GSY D G
Sbjct: 939 DDTIDGGDGNDFLYGDNGNDTIEGGSGNDTIKGSYGDDHIEGG 981
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 58/183 (31%), Gaps = 29/183 (15%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYI 243
+ + G GN+ + + +Y G+D L + + G +
Sbjct: 831 ADIIRAKGGDDIVYGND---GDDTIYGNDGNDALYGGKGEDKLYGGADNDVIYGDEGDDT 887
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV--------------- 288
E ++ G + + I + + G +GN+ + GN ++
Sbjct: 888 IYGNEGNDTLYGGDGDDEIYGGEGNDEIEGGAGNNTIYGNEGDDNIYGGGDDDTIDGGDG 947
Query: 289 ---FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERL 344
+ +GND +G SG DT I E +Y N+ D + L
Sbjct: 948 NDFLYGDNGNDTIEGGSGNDTI--KGSYGDDHIEGGEGDDKIYGELNDTLLDGGEGYDSL 1005
Query: 345 RFA 347
F
Sbjct: 1006 YFN 1008
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 16/135 (11%), Positives = 31/135 (22%), Gaps = 19/135 (14%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + I + + GND V G ++ + G D G G DT +
Sbjct: 273 GTDGTDHIRGTDKKDFIDAKGGNDFVDGLGGDDEIYGGEGKDRITGGDGNDTIYGDGGDD 332
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ D L D + + +
Sbjct: 333 E-------------IMGDAGDDTLYG------GDGNDIIFGNGGNDTIYGGKGNDKIYGE 373
Query: 375 IGQDVFESMKHFYEF 389
+ + + +
Sbjct: 374 LNDKLLDGGEGIDAL 388
Score = 44.4 bits (103), Expect = 0.061, Method: Composition-based stats.
Identities = 42/340 (12%), Positives = 74/340 (21%), Gaps = 54/340 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL--------------DLTLIGGVKNYIDLNTESWSSIG 254
+ I+ +GG+D + D L GG L T S +G
Sbjct: 339 GDDTLYGGDGNDIIFGNGGNDTIYGGKGNDKIYGELNDKLLDGGEGIDALLLTGSQIDLG 398
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAP 312
+KN + + GS V+ + NV +S D DT
Sbjct: 399 AVQKNKIKNFEILDLN-KGSYIGMVLKNLTPQNVLNITSNKDTILKISGGNKDTVILDKK 457
Query: 313 S-YLYKIYRFENAIIVYDA------------------------NEHKQDFLSDV---ERL 344
+ Y+ D++ + +
Sbjct: 458 FTASADTSGLDANYNRYEGLNDKGELIKVDIEKSIKTVFAATEPTDDADYIQGTQEADII 517
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD---- 400
R + + + G D EG D
Sbjct: 518 RAKGGDDVIYGNGGDDEIYGDEGNDIIHGNEGADKLFGGAGDDAIYGGEGNDTIEGNEGK 577
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+Y DD D EG + F +D++ D
Sbjct: 578 DKIYGNDGDDTIKGGEGDDILKGEGGNDTIYGEGGKDNIFGNE-----GDDILKGGGDDD 632
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
+ + D + + ++G
Sbjct: 633 KIYGGEGKDTIDGEAGNDTLYGNDGDDTIDGGEGNDEIYG 672
>gi|283852042|ref|ZP_06369317.1| peptidase M10A and M12B matrixin and adamalysin [Desulfovibrio sp.
FW1012B]
gi|283572592|gb|EFC20577.1| peptidase M10A and M12B matrixin and adamalysin [Desulfovibrio sp.
FW1012B]
Length = 342
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 64/181 (35%), Gaps = 16/181 (8%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISS 84
F++ D + + + ++ + ALG+ +K+ LTF +T+ S +
Sbjct: 158 YAFMQSPSDDVLSFDP-VNFAAMDQAERNSVATALGDCAKITGLTFVQTTDASAANILFG 216
Query: 85 NN-------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
G P + + F D + +HEIGHA+GL HP
Sbjct: 217 TANLDPGVAGEAYYPSSYNGKVVSEVFIDNDQYHTYNPSTDSWYQVVIHEIGHAVGLKHP 276
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+ D+ ++MSY + + Y D++A+Q IYG
Sbjct: 277 FEG-------SITLPSSLDTMENTIMSYTYTPGTTQEYIAKYNH-YQEYDVLALQYIYGT 328
Query: 198 P 198
Sbjct: 329 D 329
>gi|329848974|ref|ZP_08264002.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844037|gb|EGF93606.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 773
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 70/532 (13%), Positives = 136/532 (25%), Gaps = 30/532 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
I +N G + G T + + +
Sbjct: 142 GTGGNNRIEANGGDDDIDGGSGNDTLLGGSGNDRFHTALGGGNTYDGGSGNDTVDGSFDY 201
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF-GYCATPMVSDIVAVQK 193
+ + E +T M + D + + + AV
Sbjct: 202 GSQFDGGADSDLLDMSWVVETFGDVTFDMVTGVWNDGFGSFTAVNFESYDGAGGAEAVVG 261
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN--YIDLNTESWS 251
G + G+ ++ G D +D + + +DL + ++S
Sbjct: 262 TDGVNIINGGD----GNDTIDGGMGYDSLDGGNGIDTVDYSGVDTGVASVVVDLQSGAYS 317
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++I E+V G++GN IG + N +G D DG G DT+
Sbjct: 318 ------DGVSIETILNFENVWGAAGNQSYIGTAGANWIDGGAGADTMDGGDGNDTYVVDN 371
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + +V + ++ E+L + + + L + L
Sbjct: 372 AADRIIEASGKGTDLVRSSVSFSL-AGANAEQLILLGSAVVATGNGLGNTLTGNSGNNVL 430
Query: 372 IQVIGQDVFESMKHFYEFG-----------LSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
G D + EG D F + Y + + N +
Sbjct: 431 DGAAGSDTMLGGLGDDSYYVSVASDVVTEVAGEGTDTIFTALTYSLAGKQVEN-LTLEGA 489
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
AA + A L+ + H+ + + G D + +
Sbjct: 490 AAVNGTGNGLANILKGNSAVNTLDGGSGHDRVDGGLGADNLIGGTGNDTYVVDNAGDTVT 549
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
+ L + +G G D L +++ L
Sbjct: 550 EGAGAGGDLV---ESSVTYGLSVNVENLTLTGAAAINGTGNDLNNVLTGNSANNILAGGL 606
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLT-SYDDLWNVFGSDRSAAA 591
+ VQ D+ G I L Y + + G+ A
Sbjct: 607 GNDTYYVQNTGDNVVEAGGAGTDLIYSTVSYSLAGRYAETITLTGAANINAT 658
Score = 44.8 bits (104), Expect = 0.050, Method: Composition-based stats.
Identities = 53/360 (14%), Positives = 100/360 (27%), Gaps = 28/360 (7%)
Query: 3 NIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDI-TELNPNAQEVARWALGE 61
N T +++L S+ + D ++ D+ TE+ + AL
Sbjct: 415 NGLGNTLTGNSGNNVLDGAAGSDTMLGGLGDDSYYVSVASDVVTEVAGEGTDTIFTALTY 474
Query: 62 WSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+ E ++ + NG + +S D G+G ++
Sbjct: 475 --SLAGKQVENLTLEGAAAVNGTGNGLANILKGNSAVNTLDGGSGHDRVDGGLGADNLIG 532
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
+ D +SV + +
Sbjct: 533 GTGND----------TYVVDNAGDTVTEGAGAGGDLVESSVTYGLSVNVENLTLTGAAAI 582
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+D+ V A G + ++GG
Sbjct: 583 NGTGNDLNNVLTGNSANNILAGG---LGNDTYYVQNTGDNVVEAGG-----------AGT 628
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ +T S+S G Y + +T+ I + G+S + + GNS NN+ GND G
Sbjct: 629 DLIYSTVSYSLAGRYAETITLTGAANI-NATGNSLGNTLNGNSGNNLINGKGGNDNLSGG 687
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G D F + A S + KI+ F A + + + + +
Sbjct: 688 LGADIFLFEAGSGVDKIHDFSAAQSDIININAYTGGVVNYAIVTQSGSNVLITLGAATPS 747
>gi|291570678|dbj|BAI92950.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 300
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 7/129 (5%)
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHED 535
FD YL ++ A H+ +G EGRNP+ F + Y+A +
Sbjct: 3 TLETLFDEGFYLAQNQEVEEAIADGLFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPH 62
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQH 593
+ + + A HF N G + RS F+P YL + A +H
Sbjct: 63 IQSEVEEGITTAAA---HFVNIGQTDNRSPNPFFDPVFYLQQNPTVSQGVAKGEFTAFEH 119
Query: 594 YITHGMKEG 602
++ G +G
Sbjct: 120 FLKIGQFQG 128
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 66/173 (38%), Gaps = 10/173 (5%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
+ FD YL ++ A H+ +G EGRNP+ F + Y+A + +
Sbjct: 5 ETLFDEGFYLAQNQEVEEAIADGLFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPHIQ 64
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
+ + + HF N G + R FD YL + A H++
Sbjct: 65 SEVEEG---ITTAAAHFVNIGQTDNRSPNPFFDPVFYLQQNPTVSQGVAKGEFTAFEHFL 121
Query: 512 THGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G +G +P +F Y + D + D ++ + +HF FG E GR
Sbjct: 122 KIGQFQGLDPSESFNTEFYRDRNFDAVEGIEDE--IIGSLFEHFYRFGLELGR 172
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 70/198 (35%), Gaps = 15/198 (7%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
+ E + + +HF +G EGR+ FDS YL +++
Sbjct: 6 TLFDEGFYLAQNQEVEEAIADGLFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPHIQS 65
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
AA H++ G + R+P+ F + Y+ + + A +HF
Sbjct: 66 EVEEGITTAAAHFVNIGQTDNRSPNPFFDPVFYLQQNPTVSQGVAKGEFT---AFEHFLK 122
Query: 473 FGCEEGRFV--TFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDAFKALEY 529
G +G +F++ Y D + G+ H+ G++ GR + +
Sbjct: 123 IGQFQGLDPSESFNTEFYRDRNFDAVEGIEDEIIGSLFEHFYRFGLELGRLGAPPQLM-- 180
Query: 530 IASHEDLINAFADAPDLV 547
+DL NA A L
Sbjct: 181 ----DDLSNAIALDTLLG 194
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
F Y+A ++++ A AD L + +HFS +G EGR+ F+ + YL +
Sbjct: 6 TLFDEGFYLAQNQEVEEAIAD--GLFETAFEHFSRYGQFEGRNPNPIFDSEYYLAQNPHI 63
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRA 604
+ + AA H++ G + R+
Sbjct: 64 QSEVEEGITTAAAHFVNIGQTDNRS 88
>gi|209526449|ref|ZP_03274976.1| hypothetical protein AmaxDRAFT_3800 [Arthrospira maxima CS-328]
gi|209493084|gb|EDZ93412.1| hypothetical protein AmaxDRAFT_3800 [Arthrospira maxima CS-328]
Length = 300
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 64/173 (36%), Gaps = 10/173 (5%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
+ FD YL D+++ + A H+ +G EGR P+ F Y+A + D+
Sbjct: 5 ETLFDEGFYLAQNQDVKDAIANGVFETAFEHFSRYGQFEGRTPNPIFDGEFYLAQNPDIQ 64
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
+ + HF N G + FD YL + + A H+
Sbjct: 65 SEVEAG---ITTAAAHFVNIGQTDNLSPNPFFDPVFYLQQNPSVAQGVANGEFTAFEHFF 121
Query: 512 THGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G +G NP +F Y + D +++ + +HF FG GR
Sbjct: 122 KIGQFQGLNPSESFDTEFYRDRNFD--AVQGIEEEIIGSLFEHFFRFGSPLGR 172
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 7/129 (5%)
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHED 535
FD YL D+++ + A H+ +G EGR P+ F Y+A + D
Sbjct: 3 TLETLFDEGFYLAQNQDVKDAIANGVFETAFEHFSRYGQFEGRTPNPIFDGEFYLAQNPD 62
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEE--GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
+ + A HF N G + + F+P YL + + A +H
Sbjct: 63 IQSEVEAGITTAAA---HFVNIGQTDNLSPNPFFDPVFYLQQNPSVAQGVANGEFTAFEH 119
Query: 594 YITHGMKEG 602
+ G +G
Sbjct: 120 FFKIGQFQG 128
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 67/198 (33%), Gaps = 15/198 (7%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
+ + + + +HF +G EGR FD YL D+++
Sbjct: 6 TLFDEGFYLAQNQDVKDAIANGVFETAFEHFSRYGQFEGRTPNPIFDGEFYLAQNPDIQS 65
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ AA H++ G + +P+ F + Y+ + + A+ +HF
Sbjct: 66 EVEAGITTAAAHFVNIGQTDNLSPNPFFDPVFYLQQNPSVAQGVANGEFT---AFEHFFK 122
Query: 473 FGCEEGRFV--TFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDAFKALEY 529
G +G +FD+ Y D + G+ H+ G GR +
Sbjct: 123 IGQFQGLNPSESFDTEFYRDRNFDAVQGIEEEIIGSLFEHFFRFGSPLGRLGAPPQ---- 178
Query: 530 IASHEDLINAFADAPDLV 547
+DL NA A L
Sbjct: 179 --FGDDLSNAIALDTLLG 194
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
F Y+A ++D+ +A A+ + + +HFS +G EGR+ F+ + YL D+
Sbjct: 6 TLFDEGFYLAQNQDVKDAIAN--GVFETAFEHFSRYGQFEGRTPNPIFDGEFYLAQNPDI 63
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKS 614
+ + + AA H++ G + +S F
Sbjct: 64 QSEVEAGITTAAAHFVNIGQTDN----LSPNPFFD 94
>gi|329851022|ref|ZP_08265779.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
gi|328839868|gb|EGF89440.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
Length = 4880
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 66/519 (12%), Positives = 127/519 (24%), Gaps = 40/519 (7%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
F++++ + ++ +
Sbjct: 1461 ADGGDGNDFMNADQAVAYGATLTGGAGDDS---LTGTQNNTTSDNSVDGGLGNDTVRGGN 1517
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
+G +YG D D + Y S + +V+
Sbjct: 1518 NRDSLFGGSGNDTLYGFGGDDTIDGGSGIDIVYISGNRSSFTITETEDGDVIVAGSTTTD 1577
Query: 193 KIYGAPKGSLGNNIYKIEV-QQKDSPFIQTIYDSGGDDLLDLTLIGG-----VKNYIDLN 246
+ G + + +T+ S D ++ G
Sbjct: 1578 YLTGIEVIRFNDQDVSYQGLTLNGGVNGETLTGSAAGDTINGAGGGDRLEGEGGRDSLSG 1637
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S+ G ++A + ++G SGND + G + ++ +G+D DG +G DT
Sbjct: 1638 DAGNDSLYGGAGGDSLAGGDENDLLLGESGNDSLSGGAGDDEIGAEAGDDQVDGGTGRDT 1697
Query: 307 FFYYAPSYLYKIYRFENAIIVY-----DANEHKQDFLSDVERLRFADQ------------ 349
+ + I + V D + D L+ VE +RF D+
Sbjct: 1698 VLVDGNASDFTISVDTLSGAVTLTDNRDGSPVGSDTLTGVELIRFNDEFVALAGNTGVVV 1757
Query: 350 -----CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
L + + +G D+ E +G D
Sbjct: 1758 PGDGVSNVLSGGLGNDSLYGYEGGDQISAGVGNDLIEGGDGADLVYGGDGNDTGLGGEGN 1817
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
D + + L ++ L+ +
Sbjct: 1818 DQLLGDRGQDSLDGGTGQDLLWGGVASDTLTGGEGHDTLYGETGNDSLVGGEGNDYLNDS 1877
Query: 465 VGKDHFSNFGCEE---------GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
G + F+ G + G +Y Y D N Y G
Sbjct: 1878 SGSNTFAGGGGNDTLYGNGTLSGGDGDDQVTVYGTGYGDAGNDSVDGVSGDQSLYGGAGD 1937
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ R L+ ++ L A D AG +
Sbjct: 1938 DKLRGMAGADLLDGGDGNDILQGDSAQDGDDTIAGGSGY 1976
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 50/316 (15%), Positives = 85/316 (26%), Gaps = 6/316 (1%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ + D G + + + + G + N + G +
Sbjct: 3733 GGLGSDVLLGGLGHDAVSGGSDDDRLEGGDGVDTLHGDDGDDNLFGGNSSDVLNGDAGND 3792
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG-NNIYKIEVQ 212
D S + D ++ G + G G N
Sbjct: 3793 TLDGGAGSDFIWGSEGDDVVSGGAGDDGLAGDDGADNLSDASGDNTLVGGAGNDTLSGTG 3852
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
D Q + G + + G + T ++V
Sbjct: 3853 TLDGGDGQDVVSGSGTLTGAEGNDSLSGSGSLSGDAGADVVTGGANADVLDGGTDNDTVS 3912
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--- 329
G+ GND + G + ++ +GND G G DT + Y I + V
Sbjct: 3913 GNGGNDDITGGTGDDALTGGAGNDTLSGGDGGDTAIFAGARDQYTIVSDQAGGYVIVDNF 3972
Query: 330 --ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ D S VE L+FADQ ID I++ +A ++ G D
Sbjct: 3973 PENGDEGTDHFSGVEYLQFADQTIDVTASNFGIIIDGSAIADNKTGTSGNDFLRGFGGQD 4032
Query: 388 EFGLSEGRDITFDSYL 403
+G D
Sbjct: 4033 TLTGLDGNDTLIGDDD 4048
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/252 (18%), Positives = 72/252 (28%), Gaps = 10/252 (3%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ + G + ++ T ++V G +GND + G N+
Sbjct: 2927 WDPYSSDGAQTLDGSTGDDVVSGNHSDDSLLGGTGNDTVSGGTGNDTIDGGDDNDAVNGG 2986
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKI--YRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
G+D G G DT Y Y + +V + + +D L+ VE F D
Sbjct: 2987 EGDDTISGGLGNDTASYGGNRIYYSVVQDGLGGYAVVANRSSEGEDALNGVETAAFNDLS 3046
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----TFDSYLYLG 406
+ N I A L D + G DI D L G
Sbjct: 3047 LALDNTTAGEIHTGDADGNSLSGGGLDDSLVGLDGNDTLSGGNGNDIVRGGDGDDSLLAG 3106
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
S +D+ D AA G + R L ++ + G
Sbjct: 3107 SGNDVVYGDAGDDQVAAG----AGEDQVRGGAGDDTLLGEGDNDTVYGDGGTDSLSGGDG 3162
Query: 467 KDHFSNFGCEEG 478
D G G
Sbjct: 3163 ADQLFGNGTLSG 3174
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 68/493 (13%), Positives = 121/493 (24%), Gaps = 18/493 (3%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ + T + AD G G ++ + + LG +
Sbjct: 1234 TLTGSAANDTITALGGNDVINGNGGADSVDAGAGDDSVTTSYQNDSV---LGGDGNDTIA 1290
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
VD NDS + D V+ + IY S
Sbjct: 1291 ASTGDNNVDGGSGNDSLTAGSGADTFDGGDGADYIHVGSGLNQVTGGLGNDTIYATGSVS 1350
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G+ I + F T+ G+D L T + + I G +
Sbjct: 1351 GGDGADHINAD-QAVTFGATLSGGAGNDTLFATQNNTGTINVLDGGDDHDYIEGGNYADS 1409
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + +S+ G G D + G+ + +G ++ G G DT + + F
Sbjct: 1410 LIGGSGNDSLWGYGGADTIAGDDGADYIHAGAGLNLISGGIGNDTIYATGTADGGDGNDF 1469
Query: 322 ENAIIVYDANE-----HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
NA D L+ + +D +D + + + L G
Sbjct: 1470 MNADQAVAYGATLTGGAGDDSLTGTQNNTTSDNSVD--GGLGNDTVRGGNNRDSLFGGSG 1527
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D G DI + G+ D T G
Sbjct: 1528 NDTLYGFGGDDTIDGGSGIDIVY----ISGNRSSFTITETEDGDVIVAGSTTTDYLTGIE 1583
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
F + L D + G + G +
Sbjct: 1584 VIRFNDQDVSYQGLTLNGGVNGETLTGSAAGDTINGAGGGDRLEGEGGRDSLSGDAGNDS 1643
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
G+ + A +L A +++ D G+D
Sbjct: 1644 LYGGAGGDSLA---GGDENDLLLGESGNDSLSGGAGDDEIGAEAGDDQVDGGTGRDTVLV 1700
Query: 557 FGYEEGRSITFNP 569
G +I+ +
Sbjct: 1701 DGNASDFTISVDT 1713
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 53/442 (11%), Positives = 109/442 (24%), Gaps = 41/442 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + + + + + D IG
Sbjct: 2103 SGDDTLLGDTGHDVLYGSDGAAGGYSDDADGNTDGHPDFDRDSLDGGQGNDTLIG----- 2157
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G + D T + + + + D GY + + +
Sbjct: 2158 --GNGEDRLSDWVGNNLLQGGDDGDTLLGNGTLEGGAGGDNITGYGSLKGEAGADTINAY 2215
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTES 249
GA Y QT+ G+D + D + GG + +
Sbjct: 2216 TGATAEGGEGGDYLSGAAPGGVDGSQTLLGGAGNDTIAANWGDDSAAGGDGDDVMTGYYG 2275
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G N +I+ ++ S+ G GND + G +++ + +D G+ G D+
Sbjct: 2276 QDTLQGDAGNDSISDNSGNNSLSGGDGNDQLTGGDSDDTLSGNGDDDTLTGALGNDSLDG 2335
Query: 310 YAPSYLYKIYRF-----------ENAIIVYDANEHKQDFLSDVERLRFADQCI------- 351
A + + +V + D +S +E +RFAD +
Sbjct: 2336 GAGQDVAMLSGNRAVYSVIQDGAGGYHVVNNRGSDGSDRISSIETVRFADADLVVSSANT 2395
Query: 352 -----------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
L + + ++ G D+ + G D+
Sbjct: 2396 GAILTGDNTPSTLTGSAFDDSLTGGTAADVIVAAAGNDIVSGGEGGDSLDGGAGFDVLDG 2455
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+ A H+ +
Sbjct: 2456 GADHDSIVGGTGEDSVLGGDGNDVLDGGDDADTVSGGAGDDTASGGAGHDVVSGGAGTDA 2515
Query: 461 DLVQVGKDHFSNFGCEEGRFVT 482
+G D + G G
Sbjct: 2516 LDGGLGNDTVTGNGTLSGADGN 2537
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 72/466 (15%), Positives = 128/466 (27%), Gaps = 48/466 (10%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
++ + + +G ++ D G+G I + +
Sbjct: 1747 VALAGNTGVVVPGDGVSNVLSGGLGNDSLYGYEGGDQISAGVGNDLIEGGDGADLVYGGD 1806
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G + G D + D +G A+ ++
Sbjct: 1807 GNDTGLGGEGNDQLLGDRGQDSLD------------GGTGQDLLWGGVASDTLTGGEGHD 1854
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+YG G+ + DS T GG+D L + D + +
Sbjct: 1855 TLYG-ETGNDSLVGGEGNDYLNDSSGSNTFAGGGGNDTLYGNGTLSGGDGDD-QVTVYGT 1912
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN------------DVFDG 300
G N ++ + +S+ G +G+D + G + ++ GN D G
Sbjct: 1913 GYGDAGNDSVDGVSGDQSLYGGAGDDKLRGMAGADLLDGGDGNDILQGDSAQDGDDTIAG 1972
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYD---ANEHKQDFLSDVERLRFADQCIDSVNVK 357
SG D Y + Y I V D D L+ VE L F D + +
Sbjct: 1973 GSGYDVAIYSGTASDYTISTVAGVTTVTDNRPGAPEGTDVLTGVELLMFDDGEYELIAPA 2032
Query: 358 QRSILEYTASYEDLIQVI--------GQDVFESMKHFYEFGLSEGRDITF-----DSYLY 404
++ T + + + G D ++ G D+ D
Sbjct: 2033 TGIVVTGTGADDVIPGPAPFHDLDLTGNDTVDAGSGGDRVEAGGGHDVVLGRLANDVLEG 2092
Query: 405 LGSYDDLRNVFGSDRGAA-ARHYITHGVKEGRNPDAFKALEYIASHED-----LINAFAD 458
D L G D H + +G + A H D L +
Sbjct: 2093 GYGADTLIGGSGDDTLLGDTGHDVLYGSDGAAGGYSDDADGNTDGHPDFDRDSLDGGQGN 2152
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ G+D S++ D LG+ G +
Sbjct: 2153 DTLIGGNGEDRLSDWVGNNLLQGGDDGDTLLGNGTLEGGAGGDNIT 2198
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 61/499 (12%), Positives = 130/499 (26%), Gaps = 40/499 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + AD G G T+ + LG
Sbjct: 958 TGGDFGDSIYGYDGDDVVTAGGGRDVVYGGAGADSLDLGAGDDTVDGGAGNDTV---LGG 1014
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
S + V ++ ND+ ++ + + + +
Sbjct: 1015 DGHDSLSDTSGVNLIEGGAGNDTIVSGGTVNAGDGLDSVTGTAATTDSLSGGAGNDTLRG 1074
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ + ++ + ++ G+D L + +
Sbjct: 1075 GSGDTMNGDDGDDLVDATAQAGGTAGSLSGGTGNDTLLASGGNSDGSV------------ 1122
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
T+ +S+ G + D +IG ++V GND +G +GLDT
Sbjct: 1123 -----NTVDGGAGADSITGGAYGDSLIGGDEDDVIRGDGGNDAVNGGAGLDTILINGNRA 1177
Query: 315 LYKIYRFENAIIVY-----DANEHKQDFLSDVERLRFADQCI-----DSVNVKQRSILEY 364
+ + R ++ + D ++ E LRF D + + L
Sbjct: 1178 DFTLVRDSETGVITLTDNRNGAPQGIDTITGAEVLRFNDLDVTYEGRSLTGTELVDTLTG 1237
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRD----ITFDSYLYLGSYDDLRNVFGS--- 417
+A+ + + + G DV G D + + G +D
Sbjct: 1238 SAANDTITALGGNDVINGNGGADSVDAGAGDDSVTTSYQNDSVLGGDGNDTIAASTGDNN 1297
Query: 418 -DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
D G+ + + ++ S + + + G +
Sbjct: 1298 VDGGSGNDSLTAGSGADTFDGGDGADYIHVGSGLNQVTGGLGNDTIYATGSVSGGDGADH 1357
Query: 477 EGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
VTF + L G+ +D ++ G + +L + ++
Sbjct: 1358 INADQAVTFGATLSGGAGNDTLFATQNNTGTINVLDGGDDHDYIEGGNYADSLIGGSGND 1417
Query: 535 DLINAFADAPDLVQAGKDH 553
L G D+
Sbjct: 1418 SLWGYGGADTIAGDDGADY 1436
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 59/491 (12%), Positives = 107/491 (21%), Gaps = 69/491 (14%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ + + + + + + D+ G G ++ +
Sbjct: 2407 TLTGSAFDDSLTGGTAADVIVAAAGNDIVSGGEGGDSLDGGAGFDVLDGGADHDSIVGGT 2466
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G V G D + D + D G+ + A+ G
Sbjct: 2467 GEDSVLGGDGNDVLDGGDDADTVSGGAGDDTASGGAGHDVVSGGAGTDALDGGLG-NDTV 2525
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK----------------NYIDL 245
GN + G+D + + +
Sbjct: 2526 TGNGTLSGADGNDSVDGSGQVSGDAGNDTVAGSGGVADGGEGDDQVRSYGGTGRGGDGND 2585
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+++ G + + +++ G G+D +IG ++ SGND+ G SG D
Sbjct: 2586 TLLGYAAHSGQSADEYLDGGIGQDALYGYGGSDTLIGGQNDDTLSGGSGNDILYGGSGAD 2645
Query: 306 TFFYYAPSYLYKIYRFENA----------------------IIVYDANEHKQDFLSDVER 343
++ Y + + D L VE
Sbjct: 2646 RAYFAGNLGSYTVTTDGDNHVSIAGQGYAISYTVDEDGFVVGAAVVTGYDGTDVLYGVEA 2705
Query: 344 LRFAD----------------------------QCIDSVNVKQRSILEYTASYEDLIQVI 375
L F D L + L
Sbjct: 2706 LVFGDTELALLPYSNVGLELNGTSGDDIIIGDIGNDTMAGNGGHDRLTGDQGDDSLSGND 2765
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G DV EG+D + + N G
Sbjct: 2766 GNDVLYGDGGNDNLAGGEGQDHLYAGEGNDAAGGGDGNDTIDGSHGGDTLGGGLGDDSLL 2825
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
+ ++ L G D +N G G +L L
Sbjct: 2826 GGTGEDIVLGEDGNDTLSGGDGANLLSGGEGADSITNSGT--GLASGNAGDDWLWGNGQL 2883
Query: 496 RNVFGSDRGAA 506
G+D A
Sbjct: 2884 LGDAGNDTLYA 2894
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 64/459 (13%), Positives = 109/459 (23%), Gaps = 39/459 (8%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + + D T+ + G
Sbjct: 3105 AGSGNDVVYGDAGDDQVAAGAGEDQVRGGAGDDTLLGEGDNDTVYGDGGTDSLSGGDGAD 3164
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G D + + DS+ +D V+ Y
Sbjct: 3165 QLFGNGTLSGGEGNDLV-----RGSGTLYGDGGDDSLELTGSATVFGGAGNDTVSELWPY 3219
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
A G + T+ G+D L GG + + + G
Sbjct: 3220 FADHAISGE---AGDDVVTSGYGNDTLSGGIGNDTL----GGGDNDDSLAGDDGDDQLDG 3272
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
I +++ G +G+D + G + N+VF GND G G+D Y
Sbjct: 3273 GNSYDRIEGGDGNDTLFGGAGDDRLFGQAGNDVFHAQGGNDKIYGGGGVDVAHYSGNRND 3332
Query: 316 YKIYRFENAIIVYD---ANEHKQDFLSDVERLRFADQC--------IDSVNVKQRSIL-- 362
Y I IIV D QD L V L F D + +
Sbjct: 3333 YTIVEDNGVIIVTDNRGGAPEGQDTLYGVYTLVFTDGDYQGTPNYGYNYTGSALNDTITD 3392
Query: 363 --------------EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ ++ + + G D+ + E +G D Y
Sbjct: 3393 HSSEDVTSDRPGSNDVSSGDDTIRAGAGNDLVSGLAGADEIHGEDGDDTIDGGTEPDLIY 3452
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
+ + + R L +++L D G D
Sbjct: 3453 GEAGSDVLNGGDEDDRLDGGADNDALSGGGGEDYLLGGEGNDNLAGGDQDDLIEAGAGSD 3512
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ + + D L S D + G
Sbjct: 3513 TLTGNSGADTLYGEGDHDLISDSDGDNLVLGGDGNDTLT 3551
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 59/396 (14%), Positives = 115/396 (29%), Gaps = 33/396 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIG-------GVKNYIDLNTESWSSIGGYEKNMT 261
E + G+D + G + L+ + + + +N++
Sbjct: 4057 GEDVLNGGSAADNLAGGSGNDTYAVDDTADLIVESDGGGTDLVLSDAADYVLADHVENLS 4116
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ I + G++ N+++ GN NN+ +GND G G DTF Y +
Sbjct: 4117 LQGPGHI-NGTGNALNNLITGNDGNNLLTGGAGNDTLTGGLGDDTFAVSGLRSAYHVTVS 4175
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS------YEDLIQVI 375
V D +S VE + FAD + Q + + + + E + I
Sbjct: 4176 GGVYTV--NGTDGTDTVSGVENIEFADGTFAIAAILQVAPVAASQAIGNGVEGEVITGAI 4233
Query: 376 GQ--DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI-THGVK 432
+++ + G + G FD+ +Y +G D +
Sbjct: 4234 AATDAENDALTYSIVSGPAHGTITAFDAATGAFTYTPDAGYYGPDSFTFRANDGYADSDI 4293
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ + ++ L + D G D + + ++ +
Sbjct: 4294 ATVSLTLYHLVQGDGGDNTLAGSGLDEVVRGLGGHDSLDGGTGLDTLSGGAGNDTFVIAD 4353
Query: 493 DDL---RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY-----------IASHEDLIN 538
D G+D A+ Y E A+ A + L
Sbjct: 4354 GDTVVELADEGTDTVEASITYGLTAHVENLTLTGAAAINGTGNAGDNVLTGNAGNNLLSG 4413
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLT 574
+ +VQ D E +I + L
Sbjct: 4414 GLGNDTYVVQNAGDAVVEALGEGTDAIIASVSYTLA 4449
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 85/592 (14%), Positives = 152/592 (25%), Gaps = 30/592 (5%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
T ET I S+ Y+ ++++ G+ T+ A I
Sbjct: 1559 TITETEDGDVIVAGSTTTDYLTGIEVIRFNDQDVSYQG-LTLNGGVNGETLTGSAAGDTI 1617
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
A G G + G + ++ ++ G + +
Sbjct: 1618 NGAGGGDRLEGEGGRDSLSGDAGNDSLYGGAGGDSLAGGDENDLLLGESGNDSLSGGAGD 1677
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ G + G + V S F ++ G L G L
Sbjct: 1678 DEIGAEAGDDQVDGGTGRDTVLVDGNASDFTISVDTLSGAVTLTDNRDGSPVGSDTLTGV 1737
Query: 249 SWSSIGG------YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + V + G GND + G + GND+ +G
Sbjct: 1738 ELIRFNDEFVALAGNTGVVVPGDGVSNVLSGGLGNDSLYGYEGGDQISAGVGNDLIEGGD 1797
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D Y + N ++ D + D + + L + L
Sbjct: 1798 GAD-LVYGGDGNDTGLGGEGNDQLLGDRGQDSLDGGTGQDLLWGGVASDTLTGGEGHDTL 1856
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L+ G D F G D + L G D+
Sbjct: 1857 YGETGNDSLVGGEGNDYLNDSSGSNTFAGGGGNDTLYG-------NGTLSGGDGDDQVTV 1909
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ + + Y + +D + A A L + +
Sbjct: 1910 YGTGYGDAGNDSVDGVSGDQSLYGGAGDDKLRGMAGADLLDGGDGNDILQGDSAQ----D 1965
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
D + GS D+ G+ P A + + + E L+ +
Sbjct: 1966 GDDTIAGGSGYDVAIYSGTASDYTISTVAGVTTVTDNRPGAPEGTDVLTGVELLMFDDGE 2025
Query: 543 APDLVQAGKDHFSNFGYEE---GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+ A + G ++ G + + L LT D + G DR A G
Sbjct: 2026 YELIAPATGIVVTGTGADDVIPGPAPFHD--LDLTGNDTVDAGSGGDRVEA------GGG 2077
Query: 600 KEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYD 651
+ ++ + D +L D LY G Y D
Sbjct: 2078 HDVVLGRLANDVLEGGYGADTLIGGSGDDTLLGDTGHDVLYGSDGAAGGYSD 2129
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 63/380 (16%), Positives = 115/380 (30%), Gaps = 23/380 (6%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
G G + T+ D D + +++ + A
Sbjct: 4485 DGGAGNDTMGGSGGNDTYVVNTTGDVVNENADEGSDTVRAAVTFTLGANLENLVLTGVAN 4544
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-------SWS 251
+GN + + + + GDD + +G I S+
Sbjct: 4545 INGIGN---GLGNSLTGNAAVNVLAGGLGDDSYYVQTLGDDVLEILGEGTDVVFASVSYD 4601
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G + + +T+ I+ G+S +++ GN+ NN+ +G D F G G DT+
Sbjct: 4602 LNGRHVETLTLTGSANID-GTGNSLANMLNGNAGNNLLDGGAGYDTFAGGDGNDTYIVNL 4660
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYED 370
S + V + +E L I + ++L
Sbjct: 4661 SSETVTEGLNQGTDTVLSSATFS--LGDHLENLTLTGTANIKATGNGLNNVLTGNDGINT 4718
Query: 371 LIQVIGQDVFESMKHFYEF--GLSEGRDITFDSYLY--LGSYDDLRNVFGSDRGAAARHY 426
L +G D + EG D+ S Y LG + + G+D A +
Sbjct: 4719 LTGGLGNDSYYVQNSTDNVVENAGEGTDLILSSVSYSLLGRLVETLQLTGADNIDATGNN 4778
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG--KDHFSNFGCEEGRFVTFD 484
+ + L + LI L + G D ++F +G V +
Sbjct: 4779 QVNTL---IGNAGSNTLNGKGGADILIGGLGADIFLFEAGSRADTVTDFNGSDGDSVNIN 4835
Query: 485 SYLYLGSYDDLRNVFGSDRG 504
+Y + + L GSD
Sbjct: 4836 AYTHGVANAGLVTQVGSDTV 4855
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 48/360 (13%), Positives = 92/360 (25%), Gaps = 28/360 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-----IGGYEKNMTI 262
+ T+ G+D + V D T++ + + + +N+T+
Sbjct: 4326 GGHDSLDGGTGLDTLSGGAGNDTFVIADGDTVVELADEGTDTVEASITYGLTAHVENLTL 4385
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
I + G++G++V+ GN+ NN+ GND + + +
Sbjct: 4386 TGAAAI-NGTGNAGDNVLTGNAGNNLLSGGLGNDT----------YVVQNAGDAVVEALG 4434
Query: 323 NAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
A+ VE L + + ++L A + + G D
Sbjct: 4435 EGTDAIIASVSYTLAGRAVEALTLTGSADLTATGNSLANMLSGNAGHNLIDGGAGNDTMG 4494
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ ++ D+ ++ F G
Sbjct: 4495 GSGGNDTYVVNTTGDVVNENADEGSDTVRAAVTFTLGANLENLVLTGVANINGIGNGLGN 4554
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
+L A+ L D VQ D E D SYD +
Sbjct: 4555 SLTGNAAVNVLAGGLGDDSYYVQTLGDDVL-----EILGEGTDVVFASVSYDLNGRHVET 4609
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
+ + G + A + L G D + E
Sbjct: 4610 LTLTGSANIDGTGNSLANMLNGN------AGNNLLDGGAGYDTFAGGDGNDTYIVNLSSE 4663
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 38/256 (14%), Positives = 72/256 (28%), Gaps = 11/256 (4%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
G + + D G G I + + +G Y
Sbjct: 172 YGYGGHDLIDAGTGNDVIYAGTGNDTVTGGTGDDQIYASTGSDRLVFRVGDGSDTIYVSD 231
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
V D + + + + Q +GY D+V G +G
Sbjct: 232 ADVTDADVIEILGNLTLTNVWFQRTQSYHPSYGYGY------YDLVIHYGDQGDSITLVG 285
Query: 204 ---NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
N ++ + + I + LDL + ++ G + N
Sbjct: 286 QYYNQLFGVATYNEIRTLIVGGVEYDIVSHLDLRGTAAGETIQ--GNGGNDTLVGLDGND 343
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + +S+ G GND + G+ + +G+D G +G D + + I
Sbjct: 344 GLYGYVGNDSIDGGGGNDALSGHQGADTLIGGAGDDQIYGGTGDDRYVFTVGDGDDTINV 403
Query: 321 FENAIIVYDANEHKQD 336
+ D E D
Sbjct: 404 QDYGAGDQDVIEITGD 419
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 40/328 (12%), Positives = 89/328 (27%), Gaps = 17/328 (5%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
R + + + D G TI ++ I LG + Y G+D
Sbjct: 841 RGTAGADPVVASNGDDRISGLEGNDTIYAYEGDDTITGGLG------NDLIYGYGGIDVA 894
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ ++ D G V + + + V
Sbjct: 895 LYDGQASDYTVTVNGDTTTVTDNRDGSPNGTDTLQGVELIE-------FAEQDAATGPVT 947
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ + T+ D ++ G + + + G ++ ++V
Sbjct: 948 RIGTAGNDTLTGGDFGD----SIYGYDGDDVVTAGGGRDVVYGGAGADSLDLGAGDDTVD 1003
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND V+G ++ ++SG ++ +G +G DT +
Sbjct: 1004 GGAGNDTVLGGDGHDSLSDTSGVNLIEGGAGNDTIVSGGTVNAGDGLDSVTGTAATTDSL 1063
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ D + + + + L G D + + ++
Sbjct: 1064 SGGAGNDTLRGGSGDTMNGDDGDDLVDATAQAGGTAGSLSGGTGNDTLLASGGNSDGSVN 1123
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ G+Y D D
Sbjct: 1124 TVDGGAGADSITGGAYGDSLIGGDEDDV 1151
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 35/245 (14%), Positives = 75/245 (30%), Gaps = 4/245 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N T+ + + G G+D++ + N+V + +GND G +G D +
Sbjct: 153 VQGTDGNDTLWGEDGADPIYGYGGHDLIDAGTGNDVIYAGTGNDTVTGGTGDDQIYASTG 212
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
S + + +Y ++ D +E L Q Y Y DL+
Sbjct: 213 SDRLVFRVGDGSDTIYVSDADVTDADV-IEILGNLTLTNVWFQRTQSYHPSYGYGYYDLV 271
Query: 373 ---QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
G + +++ + + + YD + ++ A
Sbjct: 272 IHYGDQGDSITLVGQYYNQLFGVATYNEIRTLIVGGVEYDIVSHLDLRGTAAGETIQGNG 331
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G D L ++ + + G D ++ + Y+
Sbjct: 332 GNDTLVGLDGNDGLYGYVGNDSIDGGGGNDALSGHQGADTLIGGAGDDQIYGGTGDDRYV 391
Query: 490 GSYDD 494
+ D
Sbjct: 392 FTVGD 396
Score = 45.9 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 49/318 (15%), Positives = 95/318 (29%), Gaps = 10/318 (3%)
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
D + A T D + L N D +D G
Sbjct: 3663 SGGDIVTGADDSNDLTGTAFDDSIAGGLGDDTVTGLAGNDLLFGGDGNDDIAAGDGHDHG 3722
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D +L GG+ + + L ++ G + + ++++ G G+D + G +++
Sbjct: 3723 DGGAGDDSLAGGLGSDVLLGGLGHDAVSGGSDDDRLEGGDGVDTLHGDDGDDNLFGGNSS 3782
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+V +GND DG +G D + + ++ + D ++ D D +
Sbjct: 3783 DVLNGDAGNDTLDGGAGSDFIWGSEGDDVVSGGAGDDGLAGDDGADNLSDASGDNTLVGG 3842
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
A S +D++ G S D D
Sbjct: 3843 AGNDTLSGTGTLD-----GGDGQDVVSGSGTLTGAEGNDSLSGSGSLSGDAGADVVTGGA 3897
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ D L +D + G + AL A ++ L +
Sbjct: 3898 NADVLDGGTDNDTVS-----GNGGNDDITGGTGDDALTGGAGNDTLSGGDGGDTAIFAGA 3952
Query: 467 KDHFSNFGCEEGRFVTFD 484
+D ++ + G +V D
Sbjct: 3953 RDQYTIVSDQAGGYVIVD 3970
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 53/398 (13%), Positives = 90/398 (22%), Gaps = 17/398 (4%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D AD G G + A G +
Sbjct: 514 DGNDYVYGYEGNDIADGGGGIDTVYGAAGADTITGGTGNDQLYGGAGNDSFVFAEGAGND 573
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM-VSDIVAVQKIYG 196
Y D + + Q + + + D + G
Sbjct: 574 TLLVQDYAAGDEDVIVIEGDLTIDDVWFERAQSYNPYFGYIWQDLIIHYGDAGDTIYLSG 633
Query: 197 -APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ GN Y I + L L G + L ++ G
Sbjct: 634 QFQRHYFGNTNYNEIATLVVGGIAYNIVNH-------LNLRGTEASESVLGNSGNDTLTG 686
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N + +T + +GND V G + +GND SG D +
Sbjct: 687 FGGNDYLYGYTGNDIEDAGAGNDTVYGAEDVDTLIGGTGNDQLYTGSGNDIVRFSEGDGN 746
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
I+ +A D E D + + + L
Sbjct: 747 DTIFVQNSAAADSDTIELLGDLTINDVWFERTASYNPWYGNVWQDL--------VLHYGE 798
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D + F D+ + G LR+ A A + +
Sbjct: 799 GTDSILLAEQFRNDIHGNTAYNWIDTLIVGGVTYSLRDGLSFRGTAGADPVVASNGDDRI 858
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ Y +D I + G + +
Sbjct: 859 SGLEGNDTIYAYEGDDTITGGLGNDLIYGYGGIDVALY 896
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 56/268 (20%), Gaps = 6/268 (2%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
T I G N T+A + + + G G+D + GN N+V + GND G G D
Sbjct: 2727 GTSGDDIIIGDIGNDTMAGNGGHDRLTGDQGDDSLSGNDGNDVLYGDGGNDNLAGGEGQD 2786
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
Y N I + L + L
Sbjct: 2787 HL-YAGEGNDAAGGGDGNDTIDGSHGGDTLGGGLGDDSLLGGTGEDIVLGEDGNDTLSGG 2845
Query: 366 ASYEDLIQVIGQDVFE-----SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
L G D G Y S+
Sbjct: 2846 DGANLLSGGEGADSITNSGTGLASGNAGDDWLWGNGQLLGDAGNDTLYAWSEAFGDSEAD 2905
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
G N Y + ++ + D G
Sbjct: 2906 VLYIVGGGTGDGGSGNDTLAGWDPYSSDGAQTLDGSTGDDVVSGNHSDDSLLGGTGNDTV 2965
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ DD V G +
Sbjct: 2966 SGGTGNDTIDGGDDNDAVNGGEGDDTIS 2993
Score = 42.9 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 67/214 (31%), Gaps = 14/214 (6%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----YCATPMVSDIVAVQK 193
N G D D T +++ + AT + D +
Sbjct: 4633 AGNNLLDGGAGYDTFAGGDGNDTYIVNLSSETVTEGLNQGTDTVLSSATFSLGDHLENLT 4692
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-------KNYIDLN 246
+ G N + + I T+ G+D + + L+
Sbjct: 4693 LTGTANIKATGN--GLNNVLTGNDGINTLTGGLGNDSYYVQNSTDNVVENAGEGTDLILS 4750
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ S+S +G + + + I+ G++ + +IGN+ +N G D+ G G D
Sbjct: 4751 SVSYSLLGRLVETLQLTGADNID-ATGNNQVNTLIGNAGSNTLNGKGGADILIGGLGADI 4809
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
F + A S + F + +++
Sbjct: 4810 FLFEAGSRADTVTDFNGSDGDSVNINAYTHGVAN 4843
>gi|304394329|ref|ZP_07376252.1| heme peroxidase [Ahrensia sp. R2A130]
gi|303293769|gb|EFL88146.1| heme peroxidase [Ahrensia sp. R2A130]
Length = 1955
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/384 (12%), Positives = 94/384 (24%), Gaps = 22/384 (5%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
G T I + AD G G N + A+G Y
Sbjct: 1564 GSDDTLIGGGGNDNLIGGEGADSMSGGTGDDIYSVDNVGDLVIEAVGEGIDTVYATSDFT 1623
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
G + + + + + + A+ G + G
Sbjct: 1624 LGANVETLIGVGSIAQELHGNAGSNAIYGGAFNSMLFGEGGDDALLGGSGDERLDGGTGA 1683
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG----GYEKNMTI 262
+ + ++ D+ G I+ S N
Sbjct: 1684 DYMAGGAGNDTYVIDDIGDVIDETAGSGGSGIDTVEIESTYTLLSDFENLTLTGSGNFDG 1743
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + + G+SGN+ ++G+ + +GND+ G +G+DT LY +
Sbjct: 1744 NGNALDNMITGNSGNNFLLGHDGADTLIGGAGNDILGGGAGIDTMIGGLGDDLYSVTESA 1803
Query: 323 N--------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ ++E L + + + + +A + +
Sbjct: 1804 DVIVELAGEGTQDTVYAAVDYTLADNIENLILQNAGLTGTGNAMSNSMYGSAGDDRINGA 1863
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D + + G D + F A G G
Sbjct: 1864 GGADYLVGLGGNDTYIFVAGDSGV----------DYIALGFDGAGAAIGDSIELSGYGAG 1913
Query: 435 RNPDAFKALEYIASHEDLINAFAD 458
A++E D
Sbjct: 1914 ATLTEVDRNAGGAAYEVTDGTTTD 1937
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/306 (16%), Positives = 88/306 (28%), Gaps = 46/306 (15%)
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTS 161
+ A++ R G G T+ EI L H +G ++G D
Sbjct: 751 GGTNDANIIRAGNGNDTVWGDGGDDEIHGGLADDHLYGGDGDDVIFGDDG---------- 800
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT 221
+ D + G ++ K
Sbjct: 801 -------------------VDFIRGDDGDDEIHGGTEDDAITGG--KGNDVIFGDAGFDA 839
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ GDD++ GG ++ L E + G N + + ++G G+D ++
Sbjct: 840 LLGGDGDDVI----HGGTQDDEILGGEGHDLLFGDNGNDALDGEAGDDILIGGRGDDALV 895
Query: 282 GNSANNVFFESSGNDVFDGS-SGLDTFFYYAPSYLYKIY--RFENAIIVYDANEHKQ--- 335
G + +++ G D DG G D Y + + + I D +
Sbjct: 896 GGAGDDLLIGGQGADAMDGGVGGYDIASYETWNSTFATGTPGIQGLTIDLDDSALSTGHA 955
Query: 336 --DFLSDVERLRFA---DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D D+E LR D S + + A + + G DV +
Sbjct: 956 RGDSYLDIEELRGTQHNDIIFGSADPAAPDAIFGGAGNDTIDGRDGDDVISGQEGNDNIN 1015
Query: 391 LSEGRD 396
G D
Sbjct: 1016 GGAGVD 1021
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 43/354 (12%), Positives = 94/354 (26%), Gaps = 35/354 (9%)
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G I + G H G P + + T+ +
Sbjct: 690 GGNILDQIEGQTFSDILMRGTGATHMHGDAFGTPDSYHELSSLGQTDFTASDVTAEDHEV 749
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLG---NNIYKIE--VQQKDSPFIQTIYDSG 226
+ + + V G + G +++Y + + I
Sbjct: 750 IGGTNDANIIRAGNGND-TVWGDGGDDEIHGGLADDHLYGGDGDDVIFGDDGVDFIRGDD 808
Query: 227 GDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
GDD + D + GG N + + ++ G + + I T + ++G G+D++
Sbjct: 809 GDDEIHGGTEDDAITGGKGNDVIFGDAGFDALLGGDGDDVIHGGTQDDEILGGEGHDLLF 868
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHK 334
G++ N+ +G+D+ G G D + +
Sbjct: 869 GDNGNDALDGEAGDDILIGGRGDDALVGGAGDDLLIGGQGADAMDGGVGGYDIASYETWN 928
Query: 335 QDFLSDVERLR----------FADQCIDSVNVKQRSILEYTASYEDLIQV---IGQDVFE 381
F + ++ + + L T + + D
Sbjct: 929 STFATGTPGIQGLTIDLDDSALSTGHARGDSYLDIEELRGTQHNDIIFGSADPAAPDAIF 988
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
+G D+ D++ G D+ A + + + G
Sbjct: 989 GGAGNDTIDGRDGDDVI----SGQEGNDNINGGAGVDQVIFAGNRADYTIAPGT 1038
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/329 (13%), Positives = 79/329 (24%), Gaps = 35/329 (10%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYR 320
+++++GS+ D ++ +++ GND G G D+ Y + +
Sbjct: 1548 VDNLIGSAYQDHIVALGSDDTLIGGGGNDNLIGGEGADSMSGGTGDDIYSVDNVGDLVIE 1607
Query: 321 FENAIIVYDANEHKQDFLSDVERLR----------FADQCIDSVNVKQRSILEYTASYED 370
I ++VE L S+L +
Sbjct: 1608 AVGEGIDTVYATSDFTLGANVETLIGVGSIAQELHGNAGSNAIYGGAFNSMLFGEGGDDA 1667
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDLRNVFGSDRGAAARHYIT- 428
L+ G + + G D D + G D Y
Sbjct: 1668 LLGGSGDERLDGGTGADYMAGGAGNDTYVIDDIGDVIDETAGSGGSGIDTVEIESTYTLL 1727
Query: 429 ----------HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
G +G + + + L+ + G D +
Sbjct: 1728 SDFENLTLTGSGNFDGNGNALDNMITGNSGNNFLLGHDGADTLIGGAGNDILGGGAGIDT 1787
Query: 479 RFVTFDSYLYLGSYD-----DLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIAS 532
LY + +L D AA Y E +A A
Sbjct: 1788 MIGGLGDDLYSVTESADVIVELAGEGTQDTVYAAVDYTLADNIENLILQNAGLTGTGNAM 1847
Query: 533 HEDLINAFADAPDLVQAGKDHFSNFGYEE 561
+ + D G D+ G +
Sbjct: 1848 SNSMYGSAGDDRINGAGGADYLVGLGGND 1876
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 61/364 (16%), Positives = 108/364 (29%), Gaps = 47/364 (12%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
S V E +D I + NG T D D G G I
Sbjct: 740 SDVTAEDHEVIGGTNDANIIRAGNG-NDTVWGDGGDDEIHGGLADDHLYGGDGDDVIFGD 798
Query: 123 NALHEIGHALGLM--HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
+ + I G H G+ + ++ D+ +++
Sbjct: 799 DGVDFIRGDDGDDEIHGGTEDDAITGGKGNDVIFGDAGFDALLGGDGDDVIHGGTQDDEI 858
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
D++ A G G++I + + + G D +D + G
Sbjct: 859 LGGEGHDLLFGDNGNDALDGEAGDDILIGGRGDDALVGGAGDDLLIGGQGADAMDGGVGG 918
Query: 238 GV-------------------KNYIDLNTESWSS-------------IGGYEKNMTI--- 262
IDL+ + S+ + G + N I
Sbjct: 919 YDIASYETWNSTFATGTPGIQGLTIDLDDSALSTGHARGDSYLDIEELRGTQHNDIIFGS 978
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A +++ G +GND + G ++V GND +G +G+D + Y I
Sbjct: 979 ADPAAPDAIFGGAGNDTIDGRDGDDVISGQEGNDNINGGAGVDQVIFAGNRADYTIAPGT 1038
Query: 323 NAIIVYDANEH----KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+V D L+ VE L F DQ ++ + ++ + + G D
Sbjct: 1039 FGGLVVTEIAAPVGTNTDTLNGVEFLVFDDQIVNVSSGATAPLIFLDDT--EARSQFGTD 1096
Query: 379 VFES 382
V +
Sbjct: 1097 VDGA 1100
>gi|240948247|ref|ZP_04752633.1| hypothetical protein AM305_05324 [Actinobacillus minor NM305]
gi|240297286|gb|EER47827.1| hypothetical protein AM305_05324 [Actinobacillus minor NM305]
Length = 1965
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 7/151 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTI 262
+V + G+D + ++ G + I G+ N +
Sbjct: 448 GDDVFISSGNSSIFVRGGDGNDTIVGSIANDALSGENGDDFISGNAGKDLIRGHRGNDRL 507
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G S +D++ G ++ G+D DG G DT + YKI +
Sbjct: 508 FGDDGNDVIFGGSDDDMLYGGEGDDTLVGEGGDDYLDGGEGKDTAEFSGDFADYKITKMG 567
Query: 323 NAIIVYD--ANEHKQDFLSDVERLRFADQCI 351
+ +++ D DFL ++E L F D
Sbjct: 568 DGLLISDTRQGRDGTDFLRNIEMLNFKDITN 598
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 58/425 (13%), Positives = 109/425 (25%), Gaps = 37/425 (8%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D D G G T+L +G +G
Sbjct: 1456 SATGGNDTLYGNDGDDRILGGGGNDTLLGGAGSDYLGGGVG----NDVLYLEGDDTALLP 1511
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ T++ Y + S A G + D V K +
Sbjct: 1512 TYRNQQYTTLSQYNNVEFSWARAEGGKGS-----DRFVVVKDTSPNASKGLLKNLIWDFD 1566
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVK---NYIDLNT----ESWSSIGGYEKN-----M 260
D I G ++ I L + ++ G + M
Sbjct: 1567 INDKNEKIDISQFKGVTTINFYGFSVNNEQYTRIWLGEPKAGTQYVTVKGIRPDQLKAEM 1626
Query: 261 TIAQHTVIE------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
I E ++VG++GND + GN+ N+ SG D G G DT+ +
Sbjct: 1627 FIFSKEQAELPQLVHTIVGTNGNDTLKGNAIGNLIDGRSGADSMSGEFGDDTYIVD--NV 1684
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
K+ ++ + + VE ++ NV +I + L+
Sbjct: 1685 GDKVLEIKDGGYDLVKSSVSYTLSNYVEEIQL------MGNVAINAI--GNSENNRLVGN 1736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + F G D + + + + + +
Sbjct: 1737 SGNNRLDGKAGFDTMIGGLGNDTYIVDSHLDKVIEKVNQGTDTVISSVSYTLPENVEHVE 1796
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+A + + L + + G D + G + + Y D
Sbjct: 1797 LIGNAHVSATGNDVNNSLTGNSGNNRLIGYGGNDSLNGMGGNDFLMGGAGNDTYHFKRGD 1856
Query: 495 LRNVF 499
+
Sbjct: 1857 GIDTI 1861
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 9/184 (4%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSG-----GDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+++ + +Q I D G +++ G + + S + G +
Sbjct: 407 GDDLPENIHGGNGDDIVQVIGDKSVSLDLGRAEIEIAHGGRGDDVFISSGNSSIFVRGGD 466
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N TI +++ G +G+D + GN+ ++ GND G G D + S
Sbjct: 467 GNDTIVGSIANDALSGENGDDFISGNAGKDLIRGHRGNDRLFGDDGND--VIFGGSDDDM 524
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+Y E + E D+L E A+ D + K + + + G
Sbjct: 525 LYGGEGDDTLV--GEGGDDYLDGGEGKDTAEFSGDFADYKITKMGDGLLISDTRQGRDGT 582
Query: 378 DVFE 381
D
Sbjct: 583 DFLR 586
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 58/382 (15%), Positives = 109/382 (28%), Gaps = 73/382 (19%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC--ATPMVSDIVAVQKI 194
P N V ++ N +F T+++ P F +T + D
Sbjct: 1136 PDDDNAIGDVKFGESSTLNYTFNTTLLKGENPNGQWKLQFFDVATGSTGTLHDWS--LSF 1193
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGG--------------V 239
YG G ++ Y + ++ I T+ D+ GG D ++ + G
Sbjct: 1194 YGRAYG--ADDTYVYTDEFHNNQAINTLNDTNGGIDTINAAAMDGVIEVNLSTGKANLAG 1251
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
K N++ ++ G + N + + ++G GNDV++G N+V GN+
Sbjct: 1252 KVLTITNSQQIENVTGGDYNDKLTGNKAANVLIGGRGNDVLVGLEGNDVLVGGLGNNTLT 1311
Query: 300 GSSGLDTF----------------------FYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
GS G DTF + + + + +
Sbjct: 1312 GSQGNDTFIIEKKLNSQDVITDFSVGADRLVFTGFESFNLSKQQQGNDTLISLGNGQTVR 1371
Query: 338 LSDVER-------------------------LRFADQCIDSVNVKQRSILEYTASYEDLI 372
L++V+ F++ + T + L
Sbjct: 1372 LNNVQANKLTNNNIVVTTEVFKPYWLNQTGGYGFSNNNAEVALPDFGVAFWGTEGEDRLF 1431
Query: 373 QVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRGA---AARHYI 427
G D+ + D + LY DD G + A Y+
Sbjct: 1432 GGNGDDILRGGRGNDVIVGEHSADSATGGNDTLYGNDGDDRILGGGGNDTLLGGAGSDYL 1491
Query: 428 THGVKEGRNPDAFKALEYIASH 449
GV + ++
Sbjct: 1492 GGGVGNDVLYLEGDDTALLPTY 1513
Score = 57.1 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 36/234 (15%), Positives = 69/234 (29%), Gaps = 7/234 (2%)
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTS 161
+ + D + I + + G N G V + D D +S
Sbjct: 1644 VGTNGNDTLKGNAIGNLIDGRSGADSMSGEFGDDTYIVDNVGDKVLEIK-DGGYDLVKSS 1702
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT 221
V + + + ++ G + + +
Sbjct: 1703 VSYTLSNYVEEIQLMGNVAINAIGN--SENNRLVGNSGNNRLDGKAGFDTMIGGLGNDTY 1760
Query: 222 IYDSGGDDLLDLTLIGGVKNYID----LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
I DS D +++ G L +++ + V S+ G+SGN
Sbjct: 1761 IVDSHLDKVIEKVNQGTDTVISSVSYTLPENVEHVELIGNAHVSATGNDVNNSLTGNSGN 1820
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+ +IG N+ GND G +G DT+ + + IY + + N
Sbjct: 1821 NRLIGYGGNDSLNGMGGNDFLMGGAGNDTYHFKRGDGIDTIYDEQGNDTLRFTN 1874
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 50/191 (26%), Gaps = 30/191 (15%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT--IAQHTVIESVVGSSGNDV 279
I G+D+L + G + + I + E++ G +G+D+
Sbjct: 367 IQAGNGNDILRGDAQNNWLA----GGGGADTFYGGDGDDVLLIDGDDLPENIHGGNGDDI 422
Query: 280 V-----------IGNSANNVFFESSGNDVF----------DGSSGLDTFFYYAPSYLYKI 318
V +G + + G+DVF G G DT +
Sbjct: 423 VQVIGDKSVSLDLGRAEIEIAHGGRGDDVFISSGNSSIFVRGGDGNDTIV--GSIANDAL 480
Query: 319 YRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ +RL D +L + L+ G
Sbjct: 481 SGENGDDFISGNAGKDLIRGHRGNDRLFGDDGNDVIFGGSDDDMLYGGEGDDTLVGEGGD 540
Query: 378 DVFESMKHFYE 388
D + +
Sbjct: 541 DYLDGGEGKDT 551
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 66/598 (11%), Positives = 135/598 (22%), Gaps = 110/598 (18%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E D + N + + + DV G+G T+
Sbjct: 1263 ENVTGGDYNDKLTGNKAANVLIGGRGNDVLVGLEGNDVLVGGLGNNTLTGSQGNDTFIIE 1322
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
L + V D + S Q + S G T ++++ A
Sbjct: 1323 KKLNSQ----DVITDFSVGADRLVFTGFESFNLSKQQQGNDTLISLGNGQTVRLNNVQAN 1378
Query: 192 QKIYGAPKGSLG---------NNIYKIEVQQKDSPFIQT---IYDSGGDDLL------DL 233
+ + Y + + + G+D L D+
Sbjct: 1379 KLTNNNIVVTTEVFKPYWLNQTGGYGFSNNNAEVALPDFGVAFWGTEGEDRLFGGNGDDI 1438
Query: 234 TLIGGVKNYI------DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
G + I D T ++ G + + I ++++G +G+D + G N+
Sbjct: 1439 LRGGRGNDVIVGEHSADSATGGNDTLYGNDGDDRILGGGGNDTLLGGAGSDYLGGGVGND 1498
Query: 288 VFFESSGNDVF-------------------------DGSSGLDTFFY---YAPSYLYKIY 319
V + + +G G D F +P+ +
Sbjct: 1499 VLYLEGDDTALLPTYRNQQYTTLSQYNNVEFSWARAEGGKGSDRFVVVKDTSPNASKGLL 1558
Query: 320 RFENAIIVYDANEHKQDF--LSDVERLRFADQCIDSVNVK-------------------- 357
+ + K D V + F +++
Sbjct: 1559 KNLIWDFDINDKNEKIDISQFKGVTTINFYGFSVNNEQYTRIWLGEPKAGTQYVTVKGIR 1618
Query: 358 --------------------QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ T + L ++ + G D
Sbjct: 1619 PDQLKAEMFIFSKEQAELPQLVHTIVGTNGNDTLKGNAIGNLIDGRSGADSMSGEFGDDT 1678
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN--PDAFKALEYIASHEDLINA 455
+G G D ++ Y E + + + L+
Sbjct: 1679 YIVDN--VGDKVLEIKDGGYDLVKSSVSYTLSNYVEEIQLMGNVAINAIGNSENNRLVGN 1736
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD----LRNVFGSDRGAAARHYI 511
+ + G D + V + + + + H
Sbjct: 1737 SGNNRLDGKAGFDTMIGGLGNDTYIVDSHLDKVIEKVNQGTDTVISSVSYTLPENVEHVE 1796
Query: 512 THGVK--EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
G D +L + + LI + G D G + F
Sbjct: 1797 LIGNAHVSATGNDVNNSLTGNSGNNRLIGYGGNDSLNGMGGND--FLMGGAGNDTYHF 1852
Score = 39.4 bits (90), Expect = 1.8, Method: Composition-based stats.
Identities = 44/403 (10%), Positives = 97/403 (24%), Gaps = 43/403 (10%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ ++ E + F T+ + + D+ T S ++ +
Sbjct: 1136 PDDDNAIGDVKFGESSTLNYTFNTTLLKG------ENPNGQWKLQFFDVATGSTGTLHDW 1189
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + ++ V D N A N D + G+DT A +
Sbjct: 1190 SLSFYGRAYGADDTYV---YTDEFHNNQAINTLN--------DTNGGIDTINAAAMDGVI 1238
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
++ + +E + D K ++L + L+ + G
Sbjct: 1239 EVNLSTGKANLA-GKVLTITNSQQIENVTGGDYNDKLTGNKAANVLIGGRGNDVLVGLEG 1297
Query: 377 QDVFESMKHFYEFGLSEGRDI--------TFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
DV S+G D + D D G + ++
Sbjct: 1298 NDVLVGGLGNNTLTGSQGNDTFIIEKKLNSQDVITDFSVGADRLVFTGFESFNLSKQQQG 1357
Query: 429 H----GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS-NFGCEEGRFVTF 483
+ + G+ ++ +++ + + E F
Sbjct: 1358 NDTLISLGNGQTVRLNNVQANKLTNNNIVVTTEVFKPYWLNQTGGYGFSNNNAEVALPDF 1417
Query: 484 DSYL---------YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE---YIA 531
+ G+ DD+ + H +
Sbjct: 1418 GVAFWGTEGEDRLFGGNGDDILRGGRGNDVIVGEHSADSATGGNDTLYGNDGDDRILGGG 1477
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLT 574
++ L+ G D G + T+ Y T
Sbjct: 1478 GNDTLLGGAGSDYLGGGVGNDVLYLEGDDTALLPTYRNQQYTT 1520
Score = 38.2 bits (87), Expect = 4.6, Method: Composition-based stats.
Identities = 31/233 (13%), Positives = 71/233 (30%), Gaps = 12/233 (5%)
Query: 12 RIADHLLRDQYWSNYFI-RYKPDVLTTHRLSFDITELNPNAQEVARWALG-EWSKVVDLT 69
+L+ + ++ + D + + E+ ++ + ++ S
Sbjct: 1655 NAIGNLIDGRSGADSMSGEFGDDTYIVDNVGDKVLEIKDGGYDLVKSSVSYTLSNY---- 1710
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
EE + ++ + N +S D G+G T + + L ++
Sbjct: 1711 VEEIQLMGNVAINAIGNSENNRLVGNSGNNRLDGKAGFDTMIGGLGNDTYIVDSHLDKVI 1770
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
+ + + ++ V + ++ + + G
Sbjct: 1771 EKVNQGTDTVISSVSYTLPENVEHVELIGNAHVSATGNDVNNSLTGNSGNNRLIGYGGND 1830
Query: 190 AVQKIYGAP--KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
++ + G G GN+ Y K I TIYD G+D L T I +
Sbjct: 1831 SLNGMGGNDFLMGGAGNDTYHF----KRGDGIDTIYDEQGNDTLRFTNINHNQ 1879
Score = 37.8 bits (86), Expect = 5.6, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 61/253 (24%), Gaps = 27/253 (10%)
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
E + ++ + + + I+ IL A L G D
Sbjct: 333 TVTEGSGLIDGTSSFTATDNQNRDLNARQLGVINIQAGNGNDILRGDAQNNWLAGGGGAD 392
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
F ++ G+ DD+ V G + + E +
Sbjct: 393 TFYGGDGDDVL---LIDGDDLPENIHGGNGDDIVQVIGDKSVSLD---LGRAEIEIAHGG 446
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ + + + D D + + + G D
Sbjct: 447 RGDDVFISSGNSSIFVRGGDGNDTIVGSIANDALSG----------------ENGDDFIS 490
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
+ + H G D + + + L D + + G D+ G
Sbjct: 491 GNAGKDLIRGH---RGNDRLFGDDGNDVIFGGSDDDMLYGGEGDDTLVGEGGDDY--LDG 545
Query: 559 YEEGRSITFNPDL 571
E + F+ D
Sbjct: 546 GEGKDTAEFSGDF 558
>gi|224072152|ref|XP_002196904.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily b, member 1
[Taeniopygia guttata]
Length = 799
Score = 80.2 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 57/204 (27%), Gaps = 52/204 (25%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + YK + + + AL WS V LTF E
Sbjct: 202 LSGGRWDKTNLTYKIIRFPWQLVKAKV-------RRTIEEALKVWSDVTPLTFTEVQEGR 254
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G GT L
Sbjct: 255 ADIVIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGNSLGTDLL 312
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H + + F Y
Sbjct: 313 QVAAHEFGHVLGLQHTAVSKSLMSPFYI---------------------------FRYPL 345
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNN 205
+ D +Q +YG P +
Sbjct: 346 SLSEDDKQGIQYLYGKPSPAPDPT 369
>gi|269218354|ref|ZP_06162208.1| putative beta-lactamase [Actinomyces sp. oral taxon 848 str. F0332]
gi|269212213|gb|EEZ78553.1| putative beta-lactamase [Actinomyces sp. oral taxon 848 str. F0332]
Length = 588
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 52/185 (28%), Gaps = 20/185 (10%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+ TI GG+D + + V + G + I + ++G GN
Sbjct: 228 YNLTIRGGGGNDTITVPEGSSVGFT----------LSGGAGDDRINGGGSGDRILGGVGN 277
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + N+ SGND DG G D F S +Y + ++
Sbjct: 278 DEIKAGGGNDYVSGGSGNDYMDGQDGDDRMF--GGSGRDTLYGLNGDDRLSGGDDQDY-- 333
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
L +L + + G DV G D
Sbjct: 334 ------LEGGKGEDMLYGGSGNDVLSGGRGDDKIFGGAGDDVSYGGLGSDVAIGGGGADT 387
Query: 398 TFDSY 402
++D
Sbjct: 388 SYDDS 392
>gi|291569831|dbj|BAI92103.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 515
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/320 (12%), Positives = 81/320 (25%), Gaps = 14/320 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ +Y GG++ L G N + + G + N +
Sbjct: 201 GNSLILGTEGNDLLYGGGGNNTL----YGFTGNDTLIGGGGNDLLYGGQNNDFLDGGNGN 256
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++ G +D ++G ++ F +GND DG G DT + + +++
Sbjct: 257 NTLYGGLNDDTLLGGIGRDLLFGEAGNDFLDGGDGNDTLY--GGEDNDTLLGGNGNDLLF 314
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
L K L + + L+ + D+
Sbjct: 315 GNQGDD--------SLDGGPGDDTLYGGKGDDTLLGSQGNDILLGNMENDILYGGDGDDC 366
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+G D + D N F +A + + F
Sbjct: 367 LYGGQGNDTLYGGRGRDYLSGDRGNDFLVGVDTSADFPGLTTIDTLVGGEGFDTFVLGNE 426
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ + D + V + + ++ D YL+ +
Sbjct: 427 NGPFYDNGNDDINGVADYALILNFNSTTDVILLSNDDYLFSTDIPQPLPQGTAIFRRTPG 486
Query: 509 HYITHGVKEGRNPDAFKALE 528
+ EG F
Sbjct: 487 ENELIAILEGVVGLQFDGTN 506
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 65/207 (31%), Gaps = 8/207 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ G++ L D TL+GG+ + + G + N T+
Sbjct: 236 GGNDLLYGGQNNDFLDGGNGNNTLYGGLNDDTLLGGIGRDLLFGEAGNDFLDGGDGNDTL 295
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++++G +GND++ GN ++ G+D G G DT +
Sbjct: 296 YGGEDNDTLLGGNGNDLLFGNQGDDSLDGGPGDDTLYGGKGDDTLL--GSQGNDILLGNM 353
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDVFE 381
I+Y + + + + D ++ L + D + D
Sbjct: 354 ENDILYGGDGDDCLYGGQGNDTLYGGRGRDYLSGDRGNDFLVGVDTSADFPGLTTIDTLV 413
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ F F L +D+ +
Sbjct: 414 GGEGFDTFVLGNENGPFYDNGNDDING 440
Score = 41.7 bits (96), Expect = 0.39, Method: Composition-based stats.
Identities = 21/204 (10%), Positives = 40/204 (19%), Gaps = 3/204 (1%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
D + + +L L G D + D
Sbjct: 196 FEGGDGNSLILGTEGNDLLYGGGGNNTLYGFTGNDTLIGGGGNDLLYGGQNNDFLDGGNG 255
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
Y L + + G D L ++ L+ +
Sbjct: 256 NNTLYGGLNDDTLLGGIGRDLLFGEAGNDFLDGGDGNDTLYGGEDNDTLLGGNGNDLLFG 315
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
G D ++ + LGS + + + Y G
Sbjct: 316 NQGDDSLDGGPGDDTLYGGKGDDTLLGSQGNDILLGNMENDIL---YGGDGDDCLYGGQG 372
Query: 524 FKALEYIASHEDLINAFADAPDLV 547
L + L + +
Sbjct: 373 NDTLYGGRGRDYLSGDRGNDFLVG 396
>gi|218768419|ref|YP_002342931.1| putative RTX-family exoprotein [Neisseria meningitidis Z2491]
gi|121052427|emb|CAM08763.1| putative RTX-family exoprotein [Neisseria meningitidis Z2491]
Length = 697
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/260 (17%), Positives = 88/260 (33%), Gaps = 15/260 (5%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 333 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 392
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYEN-----DSFLTSVMSYFMPQDSMMDASFGYCATPM- 184
+ + + ++ DS +V SYF S
Sbjct: 393 KDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 452
Query: 185 VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
V D+ V+++ + + G++ Y+ +Y + GDDLL+ G N
Sbjct: 453 VLDVATVKEL--VQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGN 506
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ ++ G E N + + +++ G GND + G N+ +GND +G
Sbjct: 507 DSIYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGG 566
Query: 302 SGLDTFFYYAPSYLYKIYRF 321
SG DT+ + +Y +
Sbjct: 567 SGSDTYVFGKGFGQDTVYNY 586
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 86/281 (30%), Gaps = 51/281 (18%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVF-DG-SSGLDTFFYYA---------------PS 313
+ G+ GND +IG + N+ SG+D + G G DT + Y +
Sbjct: 345 LYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITA 404
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSD-----------VERLRFADQCIDSV-------- 354
+ R N +++ ++ Q + ++ + F + + V
Sbjct: 405 DMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKELVQ 464
Query: 355 -NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ L S L +G D G D +Y G+ +D N
Sbjct: 465 QSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLNGDAGND-----SIYSGNGNDTLN 519
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ Y +G + L ++ LI + G D + F
Sbjct: 520 GGEGNDAL----YGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV-F 574
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
G G+ ++ ++ D AA H+I G
Sbjct: 575 GKGFGQDTVYN--YHVDKNSDTM--HFKGFKAADVHFIRSG 611
Score = 54.4 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 55/336 (16%), Positives = 99/336 (29%), Gaps = 59/336 (17%)
Query: 273 GSSGNDVV----IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
G+ +D++ G++ N + + GND G +G D + +
Sbjct: 325 GTQADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGND-----------YLEGGSGSDTYV 373
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHF 386
QD + + + I + +L +T L+ D +F
Sbjct: 374 FGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYF 433
Query: 387 YEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG--RNPDAFKA 442
G R +I FD+ G D+ V + + + + G N
Sbjct: 434 QNDGSGAYRIDEIHFDN----GKVLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDD 489
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
Y A +DL+N A + + N G D+
Sbjct: 490 YLYGADGDDLLNGDAGNDSIYSGNGNDTLNGGE------GNDAL---------------- 527
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
Y +G + L ++ LI + +G D + FG G
Sbjct: 528 -------YGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV-FGKGFG 579
Query: 563 RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ +N ++ D + G AA H+I G
Sbjct: 580 QDTVYN--YHVDKNSDTMHFKG--FKAADVHFIRSG 611
>gi|149202356|ref|ZP_01879329.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
gi|149144454|gb|EDM32485.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
Length = 1844
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 55/334 (16%), Positives = 107/334 (32%), Gaps = 23/334 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIY-DSGGDDLLDLTLIGGV-----KNYIDLNTES 249
G + G ++Y + + D F + + G+DL+D +G + +L +
Sbjct: 151 GTAAPTNGTDVYGMTADRYDLTFSDYVVEGTAGNDLIDAAYLGDPEGDRIDDTDNLAGTN 210
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF- 308
+ N T+ ++V GS GND++ G + N+ +GND G +G DTF
Sbjct: 211 ADLVTAGLGNDTVRAGAGNDTVFGSDGNDLLDGGTGNDSLDGGNGNDTLIGGAGADTFIG 270
Query: 309 ------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ + + + +S V+ + + V I
Sbjct: 271 GTGLDLLSYATSGAAVNVNLQTNTLTGGDATGDVIISGVDGIIGSAFDDTLVGY--DDIF 328
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGS 417
+ + + G D + G D D+ Y D + G+
Sbjct: 329 DGGTTTNVIDGGAGNDSIDGRDGADSLLGGSGDDTILGGGGNDTIYYGSGNDSVEGGAGN 388
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D A + + + + +S D+++ A + + + G
Sbjct: 389 DFIDDALGFDSTADASTVSGGDGNDTIFGSSAGDILSGDAGNDSIGGESGNDLIDGGAGS 448
Query: 478 ---GRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
D+ L G D L+ G+D A
Sbjct: 449 DTIQGGAGNDTILTSGGNDSLQGGDGADVIRATA 482
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 59/485 (12%), Positives = 129/485 (26%), Gaps = 33/485 (6%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP---- 137
I S + + +S + +D + G G TIL+ + G
Sbjct: 423 ILSGDAGNDSIGGESGNDLIDGGAGSDTIQGGAGNDTILTSGGNDSLQGGDGADVIRATA 482
Query: 138 ----------GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
G + + ++ S ++ F
Sbjct: 483 TDPSGVYSFNVDGGFGGVDNDTLDLSALIADGWTISSMTQNSENNGSPGFSGQIFLSRGA 542
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
A L + I + T +G G + I +
Sbjct: 543 QSATINYTDIENILLSDFIVEGTAGGDLIDLNYTGDPNGDRVDNTDAADGSNDDEI-VAG 601
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+I N T+ + ++G++G+D ++G + N+ +G D DG +G +T
Sbjct: 602 AGDDTILAGSGNDTVLGEDGADLILGAAGDDSLLGGANNDTIAGGTGADTLDGGTGSNTL 661
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y + + N ++ D +S+ + + ++ + +
Sbjct: 662 DYSGSAGSVTVNLETNTA---FGSDADGDVISNFQNVIGSNFGDTITLSNTSGTILAGSG 718
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ L G D G D+ + G D
Sbjct: 719 NDGLAGGSGDDTIFGQDGADTILAGAGNDV-------------IVAGAGDDEIVLDDTLQ 765
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ G + L ++S D + + + + D R +
Sbjct: 766 NDTIFGGDTNEVLGDLINLSSISDGLLVYYFGEGVGSIADDVSMTEFSGIERLLMGTGDD 825
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
+ D + + G+ + G + ++ A + ++ A +
Sbjct: 826 TVVGSDGVEQIIGNSGNDLI--FAGGGNDTIFSGFDNDFVDGGAGDDSILAASGADTIVG 883
Query: 548 QAGKD 552
AG D
Sbjct: 884 GAGND 888
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 75/297 (25%), Gaps = 41/297 (13%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G + D + D GGD + G ++ + +I N T+
Sbjct: 1306 GRDFIVEGTDAGDLITVDYTGDPGGDRVDANDAADGSQDDEIIAGAGNDTIDAGAGNDTV 1365
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF------FYYAPSYLY 316
+S+ G SGND ++G N+ G DV G +G D
Sbjct: 1366 YGGIGDDSIAGGSGNDTLLGEDGNDTITGGFGQDVVYGGAGDDVLSVAISGVGDPQHLND 1425
Query: 317 KIYRFENAIIVYDA-------NEHKQDFLSDV-------ERLRFADQCIDSVNVKQRSIL 362
+Y + ++ + D +S E + + + ++
Sbjct: 1426 TLYGEDGNDQLFGSNNSQYLDGGDGNDTISGDSGINGGWESASGSSETDTLIGGAGNDLI 1485
Query: 363 E----------------YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DS 401
+ LI D E G D F DS
Sbjct: 1486 YSGFTGSATLETGDSLVGGDGNDTLIGGTANDTIEGGNDSDSILAGAGNDRIFGDAGNDS 1545
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
D L G+D ++ G E LI D
Sbjct: 1546 LDGGADADTLFGGTGNDTINVSQGDSAEGGDGDDFFRLTDLGEAATDTITLIGGEGD 1602
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 56/451 (12%), Positives = 114/451 (25%), Gaps = 41/451 (9%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
Y G VD + D + D++ + D V
Sbjct: 1015 DYTGDPGGDRVDANDAADGSQDDEIIAGAGNDTIDAGAGNDVIVAGAGDDEIVLDDTLQN 1074
Query: 199 KGSLGNNIYK------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G + + D + + G D+++ L +
Sbjct: 1075 DTIFGGDTDEVLGDLINLSSISDGLLVYYFGEGVGSIADDVSMTEFSGIERLLMGTGDDT 1134
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + I ++ + + GND + N+ +G+D +SG DT A
Sbjct: 1135 VVGSDGVEQIIGNSGNDLIFAGGGNDTIFSGFDNDFVDGGAGDDSILAASGADTIVGGAG 1194
Query: 313 SYLYKIYRFEN-AIIVYDANEHKQDFLS-------DVERLRFADQCIDSVNVKQRSILEY 364
+ + + + ++ A+ D +S + + + +D +
Sbjct: 1195 NDQIDLGQDDGDRDLLVLADGSGNDVVSSFAAPTDNGDGTYTSGDLLDVTGLTSDGTTPV 1254
Query: 365 TASYEDLIQVIGQDVFESMKHF----------------------YEFGLSEGRDITF-DS 401
T + + G +++ F G+ +GRD +
Sbjct: 1255 TTADVTVTDTNGDGTGDAILTFPGGESLTLVGVPMSSVDNTPALVAMGIPDGRDFIVEGT 1314
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
D G DR A E ++ A ++ + D
Sbjct: 1315 DAGDLITVDYTGDPGGDRVDANDAADGSQDDEIIAGAGNDTIDAGAGNDTVYGGIGDDSI 1374
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
G D + F + G D +H E
Sbjct: 1375 AGGSGNDTLLGEDGNDTITGGFGQDVVYGGAGDDVLSVAISGVGDPQHLNDTLYGE---- 1430
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D L + + L + +G +
Sbjct: 1431 DGNDQLFGSNNSQYLDGGDGNDTISGDSGIN 1461
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 77/275 (28%), Gaps = 7/275 (2%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+I + + G S + + +G + N + IG G
Sbjct: 642 TIAGGTGADTLDGGTGSNTLDYSGSAGSVTVNLETNTAFGSDADGDVISNFQNVIGSNFG 701
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
S G + G ND + D+++ + D V
Sbjct: 702 DTITLSNTSGTILAGSGNDGLAGGSGDDTIFGQDGADTILAGAGNDVIVAGAGDDEIVLD 761
Query: 194 IYGAPKGSLGNNI------YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
G + D + + G D+++ L
Sbjct: 762 DTLQNDTIFGGDTNEVLGDLINLSSISDGLLVYYFGEGVGSIADDVSMTEFSGIERLLMG 821
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++ G + I ++ + + GND + N+ +G+D +SG DT
Sbjct: 822 TGDDTVVGSDGVEQIIGNSGNDLIFAGGGNDTIFSGFDNDFVDGGAGDDSILAASGADTI 881
Query: 308 FYYAPSYLYKIYRFEN-AIIVYDANEHKQDFLSDV 341
A + + + + ++ A+ D +S
Sbjct: 882 VGGAGNDQIDLGQDDGDRDLLVLADGSGNDVVSSF 916
>gi|329849046|ref|ZP_08264074.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844109|gb|EGF93678.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1034
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 61/488 (12%), Positives = 113/488 (23%), Gaps = 37/488 (7%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S + ++ G AD G + + + G
Sbjct: 508 SGGEGNDWGNAGTGTSAQMGGGGGNDTLTGGAGADTVAGGNDNDLLSGADGADTLQGGDG 567
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSF---LTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G V+G + T V S S DA+ G + D
Sbjct: 568 TDTVTGGAGNDVVWGDSGNDLLVGGVGNDTIVGSVGNDTASYADAASGVSVDLSLFDTQ- 626
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G + S + G + L+ G N + +
Sbjct: 627 -------NTLGAGEDRLSSVENLIGSFTTDALTGDDGANQLN----GEGGNDYLVGRDGR 675
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G + + V G G D++ G +V + D G +G D
Sbjct: 676 DTLYGGAGGDDLRAGAGDDMVFGDDGEDLIFGQDGEDVLSGGADADRLLGGAGND--LLN 733
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV---NVKQRSILEYTAS 367
+ + D L + I L +
Sbjct: 734 GNEGGDILTGGSGNDTLVT--SDGDDTLEGGDDNDLLTDTIGRGYMSGETGNDTLVAGDA 791
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ L G D ++ + + + G+ +D + G D
Sbjct: 792 NDVLSGGFGNDSLDAGGGNDTLYGGDQINDDGVDTVLGGAGNDEIHTHGGDAI------- 844
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+G + S + ++ + F G + +
Sbjct: 845 -----DGGEGSDILYVHGFESTAAISINAGAGGNVAGIEAISFQGGGFADTLIGSEGGDT 899
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
++G D + GA H G L ++L D
Sbjct: 900 FVG--GDRADTALGGAGADILH-GEAGDDGMDGGGDNDILSGGDGKDNLSGGAGDDTLAG 956
Query: 548 QAGKDHFS 555
AG D +
Sbjct: 957 GAGDDIYW 964
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/354 (15%), Positives = 104/354 (29%), Gaps = 24/354 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN--------- 259
+ + + + TI G DL L + G + +++ ++ G N
Sbjct: 409 GDDRLESTLGADTIDGGDGVDLFYLDMTTGASGMLFDMSQAGTAAGTTLSNGVSVRNVEK 468
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + ++ VGSSG D G + N+ + +G + F G G D +
Sbjct: 469 VLVWGASQNDTFVGSSGGDTFFGGAGNDSYTGGAGTNSFSGGEGNDWGNAGTGTSAQMGG 528
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
N + A +D + L AD + A + + G D+
Sbjct: 529 GGGNDTLTGGAGADTVAGGNDNDLLSGADGADTLQGGDGTDTVTGGAGNDVVWGDSGNDL 588
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
S G D + G DL ++F + A V+
Sbjct: 589 LVGGVGNDTIVGSVGNDTASYADAASGVSVDL-SLFDTQNTLGAGEDRLSSVENLIGSFT 647
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
AL L + + + G+D + G ++ R D ++ +DL
Sbjct: 648 TDALTGDDGANQLNGEGGNDYLVGRDGRDTLYGGAGGDDLRAGAGDDMVFGDDGEDLI-- 705
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G L A ++ L +G D
Sbjct: 706 -----------FGQDGEDVLSGGADADRLLGGAGNDLLNGNEGGDILTGGSGND 748
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 56/367 (15%), Positives = 95/367 (25%), Gaps = 46/367 (12%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L + G + T +I G N T+ +S+ G GND + G +
Sbjct: 329 LTTSQSGTAGDDAQFGTAGQDTIQGLGGNDTLNGLGNSDSLDGGDGNDSLSGGEIGDTLN 388
Query: 291 ESSGNDVFDGS-----------------SGLDTFFYYAPSYLYKIYRFENAIIVYD---- 329
+G+D G G DT L+ + A +
Sbjct: 389 GGAGDDTISGGWNSLLNGGAGDDRLESTLGADTIDGGDGVDLFYLDMTTGASGMLFDMSQ 448
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
A LS+ +R + + Q ++ + G D + F
Sbjct: 449 AGTAAGTTLSNGVSVR-NVEKVLVWGASQNDTFVGSSGGDTFFGGAGNDSYTGGAGTNSF 507
Query: 390 GLSEGRDITFDSY------LYLGSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDA 439
EG D G D L G+D A G + D
Sbjct: 508 SGGEGNDWGNAGTGTSAQMGGGGGNDTLTGGAGADTVAGGNDNDLLSGADGADTLQGGDG 567
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR------------FVTFDSYL 487
+ A ++ + + + VG D + FD+
Sbjct: 568 TDTVTGGAGNDVVWGDSGNDLLVGGVGNDTIVGSVGNDTASYADAASGVSVDLSLFDTQN 627
Query: 488 YLGSYDDLRNVFGSDRGAAARHYI--THGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
LG+ +D + + G+ + G + L + L
Sbjct: 628 TLGAGEDRLSSVENLIGSFTTDALTGDDGANQLNGEGGNDYLVGRDGRDTLYGGAGGDDL 687
Query: 546 LVQAGKD 552
AG D
Sbjct: 688 RAGAGDD 694
Score = 45.5 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 41/331 (12%), Positives = 70/331 (21%), Gaps = 17/331 (5%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ D + G D R G G + + I
Sbjct: 648 TDALTGDDGANQLNGEGGNDYLVGRDGRDTLYGGAGGDDLRAGAGDDMVFGDDGEDLIFG 707
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G + G + + + + + S G D
Sbjct: 708 QDGEDVLSGGADADRLLGGAGNDLLNGNEGGDILTGGSGNDTLVTSDGDDTLEGGDDNDL 767
Query: 191 VQKIYGAP--KGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ G G GN+ ++ GG+D L +
Sbjct: 768 LTDTIGRGYMSGETGNDTLVAGDANDVLSGGFGNDSLDAGGGNDTLYGGDQINDDGVDTV 827
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV----VIGNSANNV-------FFESSG 294
+ + I + + + + NV F
Sbjct: 828 LGGAGNDEIHTHGGDAIDGGEGSDILYVHGFESTAAISINAGAGGNVAGIEAISFQGGGF 887
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
D GS G DTF + I+ +A + D D + L D +
Sbjct: 888 ADTLIGSEGGDTFV-GGDRADTALGGAGADILHGEAGDDGMDGGGDNDILSGGDGKDNLS 946
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
L A + DV
Sbjct: 947 GGAGDDTLAGGAGDDIYWVDAIGDVVIEAAG 977
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 36/304 (11%), Positives = 75/304 (24%), Gaps = 27/304 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG- 133
D + + S + + + D+ G G T+++ + +
Sbjct: 706 FGQDGEDVLSGGADADRLLGGAGNDLLNGNEGGDILTGGSGNDTLVTSDGDDTLEGGDDN 765
Query: 134 --LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
L G D D+ + + ++D
Sbjct: 766 DLLTDTIGRGYMSGETGNDTLVAGDANDVLSGGFGNDSLDAGGGNDTLYGGDQINDDGVD 825
Query: 192 QKIYGAPK----GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ GA G+ I E + + + G++
Sbjct: 826 TVLGGAGNDEIHTHGGDAIDGGEGSDILYVHGFESTAAISINAGAGGNVAGIEAISFQGG 885
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG------------------NSANNVF 289
++ G E T ++ +G +G D++ G +
Sbjct: 886 GFADTLIGSEGGDTFVGGDRADTALGGAGADILHGEAGDDGMDGGGDNDILSGGDGKDNL 945
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G+D G +G D ++ A + VERLR
Sbjct: 946 SGGAGDDTLAGGAGDDIYWVDAI--GDVVIEAAGQGDDIVNTTVSLILADGVERLRLGGT 1003
Query: 350 CIDS 353
I +
Sbjct: 1004 IIST 1007
>gi|251825704|gb|ACT20902.1| protease [Bacillus sp. SRC-006]
Length = 124
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 41/120 (34%), Gaps = 10/120 (8%)
Query: 56 RWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINF--DK 106
+ +L W+ V ++ F + N + P + + +
Sbjct: 5 QLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPDALKGQSWYLINS 64
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY 165
+ G HEIGH LGL HPG YN G D Y D+ SVMSY
Sbjct: 65 SYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAEDTRAYSVMSY 124
>gi|254486240|ref|ZP_05099445.1| hypothetical protein RGAI101_896 [Roseobacter sp. GAI101]
gi|214043109|gb|EEB83747.1| hypothetical protein RGAI101_896 [Roseobacter sp. GAI101]
Length = 816
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 69/203 (33%), Gaps = 12/203 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I+ G D L G + + + + +IGG + N ++ +
Sbjct: 556 GSDVIEGGRGDDAIWGGIGWDTL----RGNDGHDKLVGGDGFDAIGGGDGNDVLSGNNGA 611
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRF 321
+ + G +GND ++G ++ + + D +GS+G D + + + +
Sbjct: 612 DRLYGDNGNDKLVGGLNSDSLWGGADQDTLEGSAGSDNLYGGAGNDQLFGNAGADILEGE 671
Query: 322 ENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + D S + L+ + +L+ A ++DL G DV
Sbjct: 672 AGHDRLSGGINNDTIDGGSGDDTLQGDNGSDVLKGGDGDDLLKGNAGHDDLDGGRGNDVL 731
Query: 381 ESMKHFYEFGLSEGRDITFDSYL 403
F G+D D
Sbjct: 732 SGGFGVDRFTYGSGQDRIIDFQN 754
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 76/279 (27%), Gaps = 27/279 (9%)
Query: 211 VQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
P + + G D L D + G N + +I G + N +
Sbjct: 495 DTAPGVPMPLNLIGTPGSDTLTGDNADDIIEGRAANDVLSGMGGDDTIFGEDGNDAAYGN 554
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G G+D + G + + G+D G G D + A
Sbjct: 555 AGSDVIEGGRGDDAIWGGIGWDTLRGNDGHDKLVGGDGFDAI--GGGDGNDVLSGNNGAD 612
Query: 326 IVY-DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+Y D K + + L L A + L G D+ E
Sbjct: 613 RLYGDNGNDKLVGGLNSDSLWGGADQDTLEGSAGSDNLYGGAGNDQLFGNAGADILEGEA 672
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
D GS DD +G + D L+
Sbjct: 673 GHDRLSGGINNDTI-----DGGSGDDTLQG-------------DNGSDVLKGGDGDDLLK 714
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
A H+DL + G D F +G + R + F
Sbjct: 715 GNAGHDDLDGGRGNDVLSGGFGVDRF-TYGSGQDRIIDF 752
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/298 (14%), Positives = 77/298 (25%), Gaps = 50/298 (16%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+++G+ G+D + G++A+++ + NDV G G DT F Y + ++
Sbjct: 505 NLIGTPGSDTLTGDNADDIIEGRAANDVLSGMGGDDTIF--GEDGNDAAYGNAGSDVI-- 560
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + ++ L G D F
Sbjct: 561 ------------------------EGGRGDDAIWGGIGWDTLRGNDGHDKLVGGDGFDAI 596
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G +G D+ + Y D N + + L A +
Sbjct: 597 GGGDGNDVLSGNNGADRLYGDNGNDKLVGGLNSDSLWGGADQDTLEGSAGSDNLYGGAGN 656
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ L + G D S + G G
Sbjct: 657 DQLFGNAGADILEGEAGHDRLSGGINNDTIDGGSGDDTLQGDNGSDVLKGGDGD------ 710
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
L+ A H+DL + G D F +G + R I F
Sbjct: 711 ---------------DLLKGNAGHDDLDGGRGNDVLSGGFGVDRF-TYGSGQDRIIDF 752
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/255 (14%), Positives = 72/255 (28%), Gaps = 19/255 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ I D D G I I +G
Sbjct: 516 TGDNADDIIEGRAANDVLSGMGGDDTIFGEDGNDAAYGNAGSDVIEGGRGDDAIWGGIGW 575
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G + G D D+ + + ++ D +G + + +
Sbjct: 576 DTLRGNDGHDKLVGGDG---FDAIGGGDGNDVLSGNNGADRLYGDNGNDKLVGGLNSDSL 632
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+G + + S +Y G+D L G I +
Sbjct: 633 WGGAD----------QDTLEGSAGSDNLYGGAGNDQL----FGNAGADILEGEAGHDRLS 678
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N TI + +++ G +G+DV+ G +++ ++G+D DG G D
Sbjct: 679 GGINNDTIDGGSGDDTLQGDNGSDVLKGGDGDDLLKGNAGHDDLDGGRGND--VLSGGFG 736
Query: 315 LYKIYRFENAIIVYD 329
+ + + D
Sbjct: 737 VDRFTYGSGQDRIID 751
Score = 42.5 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 44/426 (10%), Positives = 102/426 (23%), Gaps = 58/426 (13%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
TI D G L ++ + L+ SS+ T+ + + G+ DV+
Sbjct: 299 TIADGVGTTLDGVSALSLTVQNGFLHLAVASSVESGLSVFTVDISARVAATTGTDSADVL 358
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G+++++ +GND G+ G D + + + D + D
Sbjct: 359 AGDASDDHLLGGAGNDTLSGNGGDDIL--SDGAGSDLLIGGAGRDRFIFGGDGAVDTIGD 416
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ + + ++ S + Y + + G + I
Sbjct: 417 FDITQDSIDLSGWAFLRSNSQITYQGTSDGAQLSFGSETL----------------IIKT 460
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+ S D + ++ + ++ + + D
Sbjct: 461 ANGQSLSADQIASLELVGQSRFMPDWVLPDQPDTDTAPGVPMPLNLIGTPGSDTLTGDNA 520
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
D + G+ G F +Y + + + G R
Sbjct: 521 DDIIEGRAANDVLSGMGGDDTIFGEDGNDAAYGNAGSDVIEGGRGDDAIWGGIGWDTLRG 580
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLW 580
D L + + + G D
Sbjct: 581 NDGHDKLVGGDGFDAIGGGDGNDVLSGNNGAD---------------------------- 612
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLY 640
++G + + G++ + +L L+
Sbjct: 613 RLYGDNGNDKL------------VGGLNSDSLWGGADQDTLEGSAGSDNLYGGAGNDQLF 660
Query: 641 TDYFGD 646
+ D
Sbjct: 661 GNAGAD 666
>gi|207742088|ref|YP_002258480.1| rtx family calcium-binding cytotoxins and bacteriocins protein
[Ralstonia solanacearum IPO1609]
gi|206593475|emb|CAQ60402.1| probable rtx family calcium-binding cytotoxins and bacteriocins
protein [Ralstonia solanacearum IPO1609]
Length = 1256
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 66/523 (12%), Positives = 129/523 (24%), Gaps = 66/523 (12%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+I ++ + + T + + D G I + +
Sbjct: 662 ATIGTENNDAFAGDASANTFNAGAGNDLLDGQAGNDNLSGDAGDDVIYGGDGNDFLQGND 721
Query: 133 GLMHPGSYNGGYPVYGVDNDYEND--SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G G +YG + D + ++ + G D A
Sbjct: 722 GADTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSA 781
Query: 191 -----VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+Q G + ++ + I S D +
Sbjct: 782 GKLNVIQFKDGVAPSEVVVTRSGSDLVLSIAGTTDKITASMAFYWDDTANPYNPIQQVKF 841
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + + + I + +++VG + D + N+ + G+DV DG +G D
Sbjct: 842 SDGTTWDLATIKAKALIGDDSS-QTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGND 900
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T + D L L
Sbjct: 901 TLY----------------------GGEGNDTLRG---------------GADNDNLYGG 923
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ L G D + +G F Y S + L + D + +
Sbjct: 924 NGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEV 983
Query: 426 YITHGVKEGRNPDAFKALEYIAS------------HEDLINAFADAPDLVQVGKDHFSNF 473
+T + A + AS + F+D +
Sbjct: 984 VVTRSGSDLVLSIAGTTDKITASMAFYWDDTANPYNPIQQVKFSDGTTWDLATIKAKALI 1043
Query: 474 GCEEGRF----VTFDSYLYLGSYDDLRNVFGSDR----GAAARHYITHGVKEGRNPDAFK 525
G + + D+ LG D++ G D Y G R
Sbjct: 1044 GDDSAQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADND 1103
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
L ++ L + + G D + FG +G+ ++
Sbjct: 1104 NLYGGNGNDVLDGGTGNDTLSGEGGNDTYL-FGKGDGQDFIYS 1145
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 87/306 (28%), Gaps = 9/306 (2%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ T R + + D G G T+
Sbjct: 891 DVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEGGNDTYLFG 950
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-IVA 190
G Y+ + + S + +D I A
Sbjct: 951 KGDGQDFIYSDYDTSAN-----KLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGTTDKITA 1005
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTE 248
Y + N I +++ + + TI GDD + + I+
Sbjct: 1006 SMAFYWDDTANPYNPIQQVKFSDGTTWDLATIKAKALIGDDSAQTLVGYTEADTIN-ALG 1064
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G + + +++ G GND++ G + N+ + +GNDV DG +G DT
Sbjct: 1065 GNDNVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLYGGNGNDVLDGGTGNDTLS 1124
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ Y + + +Y + + L+ ++ V ++ A
Sbjct: 1125 GEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGT 1184
Query: 369 EDLIQV 374
D I
Sbjct: 1185 TDKITA 1190
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 53/450 (11%), Positives = 103/450 (22%), Gaps = 86/450 (19%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ D N T + D G G T+
Sbjct: 706 DVIYGGDGNDFLQGNDGADTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFG 765
Query: 132 LGLMHPGSYNGGYPVYGVDN-----DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
G Y+ G N D S + S S+ + A+
Sbjct: 766 KGDGQDFIYSDYDTSAGKLNVIQFKDGVAPSEVVVTRSGSDLVLSIAGTTDKITASMAFY 825
Query: 187 -DIVAVQKIYGAPKGSLGNNIYKIEV----QQKDSPFIQTIYDSGGDDLLDLTL-----I 236
D A + + QT+ D ++
Sbjct: 826 WDDTANPYNPIQQVKFSDGTTWDLATIKAKALIGDDSSQTLVGYTEADTINALGGNDNVY 885
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + ++ G E N T+ +++ G +GND + G + N+ GND
Sbjct: 886 GQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEGGND 945
Query: 297 V-FDG-SSGLDTFF--------------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G G D + + ++ + + + D ++
Sbjct: 946 TYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGTTDKITA 1005
Query: 341 ---------------VERLRFADQC----------------------------------- 350
+++++F+D
Sbjct: 1006 SMAFYWDDTANPYNPIQQVKFSDGTTWDLATIKAKALIGDDSAQTLVGYTEADTINALGG 1065
Query: 351 -IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ +L+ A + L G D+ G D+ D
Sbjct: 1066 NDNVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLYGGNGNDVL----DGGTGND 1121
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L G+D + + + A
Sbjct: 1122 TLSGEGGNDTYLFGKGDGQDFIYSDYDTSA 1151
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 55/365 (15%), Positives = 105/365 (28%), Gaps = 16/365 (4%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
++ +V + D+ D T G N + ++ G + I
Sbjct: 651 SVTGFDVFAAAATIGTENNDAFAGDASANTFNAGAGNDLLDGQAGNDNLSGDAGDDVIYG 710
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G+ G D + G + ++ + +GND DG +G DT + Y + +
Sbjct: 711 GDGNDFLQGNDGADTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQ 770
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV----IGQDVF 380
+Y + L+ ++ V ++ A D I D
Sbjct: 771 DFIYSDYDTSAGKLNVIQFKDGVAPSEVVVTRSGSDLVLSIAGTTDKITASMAFYWDDTA 830
Query: 381 ESMKHFYEFGLSEGRDITFDS-----YLYLGSYDDLRNVFGSDRGAAARH----YITHGV 431
+ S+G + + S L +D A Y G
Sbjct: 831 NPYNPIQQVKFSDGTTWDLATIKAKALIGDDSSQTLVGYTEADTINALGGNDNVYGQGGD 890
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
L ++ L + G D + + YL
Sbjct: 891 DVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEGGNDTYLFG 950
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
D ++ SD +A K+G +P + S DL+ + A D + A
Sbjct: 951 KGDGQDFIYSDYDTSANKLNVIQFKDGVSPS---EVVVTRSGSDLVLSIAGTTDKITASM 1007
Query: 552 DHFSN 556
+ +
Sbjct: 1008 AFYWD 1012
>gi|330971035|gb|EGH71101.1| putative hemolysin-type calcium-binding region [Pseudomonas syringae
pv. aceris str. M302273PT]
Length = 1610
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 83/299 (27%), Gaps = 12/299 (4%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S +D ++G+S N+V G D G G D + + +
Sbjct: 1227 HIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ ++VE L I+ ++++ A+ L G D+
Sbjct: 1287 VSSVSWTLGANVENLVLTGVSAINGTGNAVKNVIIGNANNNILDGAAGADMLTGGDGSDS 1346
Query: 389 FGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRGAAARH---YITHGVKEGRNPDAFKAL 443
+ + + R + ++ +G D + + S A + G +
Sbjct: 1347 YYVDDAADRVVETNTDAQVGGVDTVYSSLASYTLGANLENLVINSSGAANATGNALDNLI 1406
Query: 444 EYIASHEDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
A + + + L ++L +D
Sbjct: 1407 YAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTSAQQATGGSGLDTLKGTENLIGSQFAD 1466
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
++ T D L A + LI + G DH+ G +
Sbjct: 1467 TLTGNKNANTLS-----GGDGNDTLSGGAGDDVLIGGSGADTLIGGTGADHYVFNGISD 1520
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/293 (13%), Positives = 84/293 (28%), Gaps = 6/293 (2%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G N+ Y + + +D +I + + + ++ G
Sbjct: 327 GNTITGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVNG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I E + G +G D + G S +++ +G D G +G DTF + +
Sbjct: 387 TEGNDVITGGAAHEQIFGLAGKDTLSGGSGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + +V D + L+++ ++N+ + L+ T
Sbjct: 447 YRTATTSSTDLVTDFDISQDRIDLTNLGFTGLGSGKGGTLNISYNATLDRTYVKSLDADA 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ I D L G+D G
Sbjct: 507 SGNRFELGLSGNLKDTLNASHFIFQHVVEGTAGGDTLTGTDGNDVLN-----GNAGTDRI 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ A + L + D + N+ + +
Sbjct: 562 DGGAGADTITGGADADTLTGGAGADLFIYNSRLDSYRNYTASGTKQSDTITDF 614
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 54/497 (10%), Positives = 118/497 (23%), Gaps = 34/497 (6%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ + + D G G ++ ++ G +
Sbjct: 382 VTVNGTEGNDVITGGAAHEQIFGLAGKDTLSGGSGDDILVGGAGADKLTGGAGAD-TFRF 440
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ Y D +S + + + +I +
Sbjct: 441 DQLTDSYRTATTSSTDLVTDFDISQDRIDLTNLGFTGLGSGKGGTLNI--------SYNA 492
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+L K + D L+ + + G
Sbjct: 493 TLDRTYVKSLDADASGNRFELGLSGNLKDTLNASHFIFQH-----------VVEGTAGGD 541
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T+ + + G++G D + G + + + D G +G D F Y + Y+ Y
Sbjct: 542 TLTGTDGNDVLNGNAGTDRIDGGAGADTITGGADADTLTGGAGADLFIYNSRLDSYRNYT 601
Query: 321 FENA----IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
I + LS + D +++ + + T D + G
Sbjct: 602 ASGTKQSDTITDFNPAEDRIDLSSIGLRGLGDGSANTIYLSVNADGSKTYIKTDAVDSTG 661
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+++ LS F + L + + +
Sbjct: 662 NRFEIALQGNLADKLSASN-FIFSTASAANQAPVLNTPLMDQNVTELKAFSYAVQPGSFS 720
Query: 437 PDAFKALEYIASHEDLINAFA----DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
L Y A+ D D+ L G + G D+ +
Sbjct: 721 DPDSDTLTYSATLADNSALPEWLKFDSKTLTFSGTPGGTASGLYSVLLTASDATGASVAD 780
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
NV G + + + + + L AG+D
Sbjct: 781 SFAINVGNVTPGILTGTEN---AEALYGTEGNDTILGLGGDDTLRGDTGADIINGGAGRD 837
Query: 553 HFSNFGYEEGRSITFNP 569
+ +G + + ++
Sbjct: 838 --ALYGGADADTFVYSA 852
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 82/283 (28%), Gaps = 23/283 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE N + + S + E + + N
Sbjct: 1262 DIYVVDNAFDTVTESNDS-PSQVDTVVSSVSWTLGANVENLVLTGVSAINGTGNAVKNVI 1320
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ + AD+ G G + +A +
Sbjct: 1321 IGNANNNILDGAAGADMLTGGDGSDSYYVDDAA---------------DRVVETNTDAQV 1365
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ +S+ SY + + A + + GA G+N+ + +
Sbjct: 1366 GGVDTVYSSLASYTLGANLENLVINSSGAANATGNALDNLIYAGA-----GDNVM--DGR 1418
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ +G L+ + + ++ G + T+ + ++
Sbjct: 1419 DGNDTVSYLFATAGVTVALNTSAQQATGGSGLDTLKGTENLIGSQFADTLTGNKNANTLS 1478
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
G GND + G + ++V SG D G +G D + + S
Sbjct: 1479 GGDGNDTLSGGAGDDVLIGGSGADTLIGGTGADHYVFNGISDT 1521
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 38/248 (15%), Positives = 76/248 (30%), Gaps = 8/248 (3%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
S I +G T + K D + I L + A +
Sbjct: 624 SSIGLRGLGDGSANTIYLSVNADGSKTYIKTDAVDSTGNRFEIALQGNLADKLSASNFIF 683
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD-ASFGYCATPMVSDIVAVQKIY 195
+ + + SY + S D S + ++D A+ +
Sbjct: 684 STASAANQAPVLNTPLMDQNVTELKAFSYAVQPGSFSDPDSDTLTYSATLADNSALPEWL 743
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+L + + T D+ G + D I++ + + G
Sbjct: 744 KFDSKTLTFSGTPGGTASGLYSVLLTASDATGASVADSFA-------INVGNVTPGILTG 796
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + ++++G G+D + G++ ++ +G D G + DTF Y A +
Sbjct: 797 TENAEALYGTEGNDTILGLGGDDTLRGDTGADIINGGAGRDALYGGADADTFVYSALTDS 856
Query: 316 YKIYRFEN 323
Y+ Y
Sbjct: 857 YRDYDAGG 864
>gi|107021849|ref|YP_620176.1| glycosyl transferase, group 1 [Burkholderia cenocepacia AU 1054]
gi|116688798|ref|YP_834421.1| glycosyl transferase, group 1 [Burkholderia cenocepacia HI2424]
gi|105892038|gb|ABF75203.1| glycosyl transferase, group 1 [Burkholderia cenocepacia AU 1054]
gi|116646887|gb|ABK07528.1| glycosyl transferase, group 1 [Burkholderia cenocepacia HI2424]
Length = 740
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 28/165 (16%)
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD--------- 522
N E D Y Y DL ++ H+ G +EGR+P+
Sbjct: 11 NASGRETAPAELDLLFYRSWYSDLASL---SDTRLVMHWRKEGPEEGRHPNLNALLQKEL 67
Query: 523 --------AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLT 574
F Y+A + D+ + + H+ G +GR F+ Y+
Sbjct: 68 LDPTDLPEDFSPETYVALNPDIKASLPSSYH----ATHHYLKTGAAQGRPFRFDWQFYVD 123
Query: 575 SYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLS 619
+ DL ++ + A QH++ G +GR ++ F + + ++
Sbjct: 124 VHPDLAHLK--SKQEAIQHWLQQGRHDGRFPSLND--FLASLGIT 164
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 65/200 (32%), Gaps = 35/200 (17%)
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+L Y + Y DL + + H+ + G EGR ++ L D
Sbjct: 23 DLLFYRSWYSDLASLSDTRLVM---HWRKEGPEEGRHPNLNA---------LLQKELLDP 70
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
P+ F Y+A + D+ + + H+ G +GR
Sbjct: 71 TDL--------------PEDFSPETYVALNPDIKASLPSSYHATH----HYLKTGAAQGR 112
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR--NPDAFKALEYIASHEDLI 537
FD Y+ + DL + A +H++ G +GR + + F A I L
Sbjct: 113 PFRFDWQFYVDVHPDL--AHLKSKQEAIQHWLQQGRHDGRFPSLNDFLASLGITR-SVLP 169
Query: 538 NAFADAPDLVQAGKDHFSNF 557
+H+ NF
Sbjct: 170 AQLTLDEIHRLNPDEHYPNF 189
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 4/114 (3%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
Y A D+ + + + H+ + G ++GR FD Y+ + DL ++ A
Sbjct: 82 YVALNPDIKASLPS-SYHATHHYLKTGAAQGRPFRFDWQFYVDVHPDLAHLKSKQE--AI 138
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD-APDLVQVGKDHFSNFGCE 476
+H++ G +GR P L + ++ A +H+ NF
Sbjct: 139 QHWLQQGRHDGRFPSLNDFLASLGITRSVLPAQLTLDEIHRLNPDEHYPNFSTA 192
>gi|163853954|ref|YP_001641997.1| hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
gi|163665559|gb|ABY32926.1| Hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
Length = 781
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 78/267 (29%), Gaps = 41/267 (15%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALG-LMHPGS--------YNGGYPVYGVDNDY 153
F G HEIGH LG L P + +NG +
Sbjct: 105 WFYDPTGVAAAPGNRFDAFTIFQHEIGHGLGFLEFPATVGANGLLLFNGENTRTVLGGPV 164
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
D V + +G + D+ +Q + ++
Sbjct: 165 VLDGARAHV--WGSEDLMDPYLGWGQRSYISDLDLAMLQDKGMPISTERADKMWLGNR-- 220
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
T + GGDD +D G + + ++++G
Sbjct: 221 -----ADTFFAYGGDDWID----------------------GGWGDDKLFGGVGNDTLIG 253
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-KIYRFENAIIVYDANE 332
GND + G + ++ +G D +G G+D S Y +Y ++ +
Sbjct: 254 GDGNDALDGGAGDDTLIGGNGGDTLEGGEGIDRAVLTGRSQDYVALYGAAGSLAIKHLGS 313
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQR 359
D L+ +E L F D + +
Sbjct: 314 GNIDTLTSIETLNFDDTVLGMSGLLAH 340
Score = 42.5 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 40/154 (25%), Gaps = 50/154 (32%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+ + D + + + FF G+D DG G D F
Sbjct: 207 ISTERADKMWLGNRADTFFAYGGDDWIDGGWGDDKLF----------------------G 244
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L + L+ A + LI G D E +
Sbjct: 245 GVGNDTL---------------IGGDGNDALDGGAGDDTLIGGNGGDTLEGGEG------ 283
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
D + G D ++G+ A +H
Sbjct: 284 -------IDRAVLTGRSQDYVALYGAAGSLAIKH 310
>gi|158333401|ref|YP_001514573.1| type I secretion target repeat-containing protein [Acaryochloris
marina MBIC11017]
gi|158303642|gb|ABW25259.1| type I secretion target repeat protein, putative [Acaryochloris
marina MBIC11017]
Length = 682
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/341 (15%), Positives = 94/341 (27%), Gaps = 12/341 (3%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
G + + D +D G G T++ G +N G
Sbjct: 258 GGNDIAQGGDGNDVISGGDGSDFLDGGAGDDTVIGDKGDDTKLGGDG-NDRIIWNDGDGS 316
Query: 147 YGVDNDYENDSFLTSVMSYFMPQD---SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+D + D+ + + + F D+ G
Sbjct: 317 DRIDGGADMDTVEVNGSPDLGDEFEVAAGASDVFFQRVNLGQFDLDISTVETLEVNSDGG 376
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
++ + + G D+L+ L + N T+
Sbjct: 377 DDQFTVGDLSGTGLEKVVFNAGYGSDVLEGADATTDVQA--LGGTGDDTFTSGSGNDTLE 434
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+S+ G +G+D ++G ++ +GND+ DG SG DT + + +
Sbjct: 435 GEGGNDSLAGGNGDDQLLGGEGDDTLRGGNGNDLTDGGSGNDTADFSDIPFEIRADLNTG 494
Query: 324 AIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
A D L +E L + + +IL+ + L G D
Sbjct: 495 KAQYDVAPGVTVEDTLVSIENLTGSTFNDRLAGDRNANILDGGDGNDRLTGRRGADTLLG 554
Query: 383 MKHFYEFGLSEGRD-----ITFDSYLYLGSYDDLRNVFGSD 418
G D D L DDL G+D
Sbjct: 555 GNGDDNLIGGRGADRLVGGADKDVLLGGRGADDLNGGTGND 595
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 69/248 (27%), Gaps = 47/248 (18%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+YG P+ + + + +P + I GG+D + + N I + I
Sbjct: 217 LYGEPQAAETLDGDDGDNVLTGTPGGEFIRGFGGNDAI----LAFGGNDIAQGGDGNDVI 272
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF--FESSGNDVFDGSSGLDTFFYYA 311
G + + + ++V+G G+D +G N+ + G+D DG + +DT
Sbjct: 273 SGGDGSDFLDGGAGDDTVIGDKGDDTKLGGDGNDRIIWNDGDGSDRIDGGADMDTVEVNG 332
Query: 312 PSYLYKIYRFENAIIVY----------------------------DANEHKQDFLSDVER 343
L + D + +E+
Sbjct: 333 SPDLGDEFEVAAGASDVFFQRVNLGQFDLDISTVETLEVNSDGGDDQFTVGDLSGTGLEK 392
Query: 344 LRFADQ-------------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ F + ++ + + L G D +
Sbjct: 393 VVFNAGYGSDVLEGADATTDVQALGGTGDDTFTSGSGNDTLEGEGGNDSLAGGNGDDQLL 452
Query: 391 LSEGRDIT 398
EG D
Sbjct: 453 GGEGDDTL 460
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 50/361 (13%), Positives = 93/361 (25%), Gaps = 11/361 (3%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ GN + + I D G+ TL G + + T I G+ N
Sbjct: 192 TSGNTPIGANDDPANGVDVVVIDDLLYGEPQAAETLDGDDGDNVLTGTPGGEFIRGFGGN 251
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I + G GNDV+ G ++ +G+D G G DT +
Sbjct: 252 DAILAFGGNDIAQGGDGNDVISGGDGSDFLDGGAGDDTVIGDKGDDTKLGGDGNDRIIWN 311
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + + ++ L + + + ++ I +
Sbjct: 312 DGDGSDRIDGGADMDTVEVNGSPDLGDEFEVAAGASDVFFQRVNLGQ-FDLDISTVETLE 370
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
S +F + + + ++ Y + G+D + G +
Sbjct: 371 VNSDGGDDQFTVGDLSGTGLEKVVFNAGYGSDV-LEGADATTDVQALGGTGDDTFTSGSG 429
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNF-------GCEEGRFVTFDSYLYLGSY 492
LE ++ L D L G D G F +
Sbjct: 430 NDTLEGEGGNDSLAGGNGDDQLLGGEGDDTLRGGNGNDLTDGGSGNDTADFSDIPFEIRA 489
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED-LINAFADAPDLVQAGK 551
D D T E F + + L + + G
Sbjct: 490 DLNTGKAQYDVAPGVTVEDTLVSIENLTGSTFNDRLAGDRNANILDGGDGNDRLTGRRGA 549
Query: 552 D 552
D
Sbjct: 550 D 550
>gi|149202557|ref|ZP_01879529.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
gi|149143839|gb|EDM31873.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
Length = 576
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/372 (13%), Positives = 91/372 (24%), Gaps = 24/372 (6%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
I ++ + +++ + + + + G G D ++G N+V
Sbjct: 147 TQGPFAPNQPIAISAFANTTVSELSDDELVIGTNGQDLLTGDEGQDTLLGLDGNDVLNGG 206
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
G+D+ DG G DT Y S + + D L ++E++ FA Q +
Sbjct: 207 EGDDLLDGGEGFDTATYNIGSPSEFQITLTETGLRLASPSEGVDDLINIEQVEFAGQSVL 266
Query: 353 SVN---------------VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ + L T + LI G D + G D
Sbjct: 267 VSDLIEEIVGRPGVFLVAAEGGDTLIGTDDNDTLIGEQGHDGLAGGPGNDTLEGNGGNDS 326
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
S N G ++ A ++ +
Sbjct: 327 ISGSDGNDLISGGADNDSIGGGQGDDTIDGGSGDDIIGGGFGADSITGGAGNDVVAGGAD 386
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD-DLRNVFGSDRGAAARHYITHGVK 516
G D S + + G D N D G
Sbjct: 387 SDTLQGGEGNDSMSGSFGNDSIDGGEGADDIGGGTGRDTINAGAGDDRVG----GGEGND 442
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSY 576
D L ++ + + AG D G + F+ +
Sbjct: 443 SIFGGDGNDFLAGGGRNDVIDGGAGNDTINAGAGND--VITGGADADLFVFSA--FFDGE 498
Query: 577 DDLWNVFGSDRS 588
D F
Sbjct: 499 SDAITDFEDGSD 510
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 58/391 (14%), Positives = 106/391 (27%), Gaps = 11/391 (2%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
S SD + + NG D + D DV G G + +
Sbjct: 165 TTVSELSDDELVIGTNGQ-DLLTGDEGQDTLLGLDGNDVLNGGEGDDLLDGGEGFDTATY 223
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYEN--DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
+G + + E D + + + D P V +
Sbjct: 224 NIGSPSEFQITLTETGLRLASPSEGVDDLINIEQVEFAGQSVLVSDLIEEIVGRPGVFLV 283
Query: 189 VAVQKIYGAPKGSLGNNI-YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
A I + P T+ +GG+D ++ G N +
Sbjct: 284 AAEGGDTLIGTDDNDTLIGEQGHDGLAGGPGNDTLEGNGGND----SISGSDGNDLISGG 339
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
SIGG + + TI + + + G G D + G + N+V + +D G G D+
Sbjct: 340 ADNDSIGGGQGDDTIDGGSGDDIIGGGFGADSITGGAGNDVVAGGADSDTLQGGEGNDSM 399
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTA 366
I E A + + +R+ + L
Sbjct: 400 --SGSFGNDSIDGGEGADDIGGGTGRDTINAGAGDDRVGGGEGNDSIFGGDGNDFLAGGG 457
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + G D + D+ S + G D + + R +
Sbjct: 458 RNDVIDGGAGNDTINAGAGNDVITGGADADLFVFSAFFDGESDAITDFEDGSDIFLIRRF 517
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
E N ++A+ + + A
Sbjct: 518 DPDTGVENINNGGNGLAGFLAAMKIVDWAGG 548
>gi|186687000|ref|YP_001870389.1| hemolysin-type calcium-binding region [Nostoc punctiforme PCC 73102]
gi|186469624|gb|ACC85421.1| Hemolysin-type calcium-binding region [Nostoc punctiforme PCC 73102]
Length = 2495
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/433 (12%), Positives = 121/433 (27%), Gaps = 35/433 (8%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ N +S + D G+ T +
Sbjct: 1969 GTDNINGTGNALDNQITGNSGDNVLYGGKGNDTLSGNGGQDTFVFRLGDGNDTIT---DF 2025
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
G G P V + F+ ++ Q + + +V+ V +Q
Sbjct: 2026 AGIGRGSNPSAKVITQLDTLQFIGRGLTARNLQLTQNGNNLEVSFENVVNTKVTLQNFKL 2085
Query: 197 APKGSLGNNIYK-------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+L + + Q + I + + N ++ N
Sbjct: 2086 ENLDNLSATSSRPALGNILFDGQTSITDSFDVIDANSTQTSIFTKNTVTFLNDLNNNITG 2145
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ N I + + G SGND++ G + N+ +GND+ G +G DTF +
Sbjct: 2146 FD-----NSNDVINGQGGNDIINGLSGNDILRGGAGNDTLIGGAGNDILTGGTGNDTFVF 2200
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ I F V + +S ++ L+F S + L +
Sbjct: 2201 HPDDGNDTITDFGG---VGKGSNPSAAVISQLDTLQFTG----SGLTARNLQLTQNGNNL 2253
Query: 370 DLIQVIGQDVFESMKHF-----YEFGLSEGR----DITFDSYLYLGSYDDLRNVFGSDRG 420
++ + ++++F + R +I FD + D+ + +
Sbjct: 2254 EVSFENVANTKVTLQNFKLENLDNLSATSSRPALGNILFDGQTSITDSFDVIDANSTQTS 2313
Query: 421 AAARHYITHGVKEGRNPDAFKA----LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
++ +T N F + ++ + + G D
Sbjct: 2314 IFTKNTVTFLNDLNNNITGFDNSNDVINGQGGNDIINGLSGNDILRGGAGNDTLIGGAGN 2373
Query: 477 EGRFVTFDSYLYL 489
+ + +L
Sbjct: 2374 DMLRGGAGADRFL 2386
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/326 (13%), Positives = 94/326 (28%), Gaps = 31/326 (9%)
Query: 32 PDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCT 91
D T+ SFD+ + N + + ++ + + + + G
Sbjct: 2105 FDGQTSITDSFDVIDANSTQTSIFTKNTVTFLNDLN---NNITGFDNSNDVINGQGGNDI 2161
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
S + D G G + + HP N +G
Sbjct: 2162 INGLSGNDILRGGAGNDTLIGGAGNDILTGGTGNDTF-----VFHPDDGNDTITDFGGVG 2216
Query: 152 D---------YENDSFLTSVM--SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ D+ + + Q + + + + V +Q
Sbjct: 2217 KGSNPSAAVISQLDTLQFTGSGLTARNLQLTQNGNNLEVSFENVANTKVTLQNFKLENLD 2276
Query: 201 SLGNNIYK-------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+L + + Q + I + + N ++ N +
Sbjct: 2277 NLSATSSRPALGNILFDGQTSITDSFDVIDANSTQTSIFTKNTVTFLNDLNNNITGFD-- 2334
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N I + + G SGND++ G + N+ +GND+ G +G D F Y +
Sbjct: 2335 ---NSNDVINGQGGNDIINGLSGNDILRGGAGNDTLIGGAGNDMLRGGAGADRFLYNTGT 2391
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLS 339
+ I ++++E + L+
Sbjct: 2392 AFKGSAIGVDTITDFNSSEGDKIVLN 2417
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 57/166 (34%), Gaps = 22/166 (13%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ S + I +GG +++ + L GG + I G + I
Sbjct: 1607 DDNILGSDIAEIIRGNGGLNIIYGGSGNDQLFGGDDSDFISGDAGSDVIDGGAGDDLIDG 1666
Query: 265 H------------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + G G+D+++G ++ G+D+ DG G DT
Sbjct: 1667 DGILNSESTPNSSAANDVINGGQGDDILLGGIGDDRLIPGKGDDLIDGGEGTDTGVASGK 1726
Query: 313 SYLYKIYRFENAIIVY-----DANEHKQDFLSDVERLRFADQCIDS 353
YKI + + +V N + D ER F+D+ +
Sbjct: 1727 QENYKIRKRLDGSVVVIDRRTSDNNEGLELYRDTERFEFSDRTLTI 1772
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 74/493 (15%), Positives = 130/493 (26%), Gaps = 59/493 (11%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYD--SGGDDLL-DLTLIGGVKN-----YIDLNT 247
G+ G+N+ K + T G+D + D IG N L+T
Sbjct: 1985 TGNSGDNVLYGGKGNDTLSGNGGQDTFVFRLGDGNDTITDFAGIGRGSNPSAKVITQLDT 2044
Query: 248 ESWSSIGGYEKNMTIAQH-----TVIESVVGSSGNDVVIGNSANNVFFESS-----GNDV 297
+ G +N+ + Q+ E+VV + + +S GN +
Sbjct: 2045 LQFIGRGLTARNLQLTQNGNNLEVSFENVVNTKVTLQNFKLENLDNLSATSSRPALGNIL 2104
Query: 298 FDGSSG-LDTF-FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
FDG + D+F A S I+ + D N + F + + +
Sbjct: 2105 FDGQTSITDSFDVIDANSTQTSIFTKNTVTFLNDLNNNITGFDNSNDVINGQGGNDIING 2164
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL--SEGRDITFDSYLYLGSYD---- 409
+ IL A + LI G D+ F +G D D +
Sbjct: 2165 LSGNDILRGGAGNDTLIGGAGNDILTGGTGNDTFVFHPDDGNDTITDFGGVGKGSNPSAA 2224
Query: 410 -----DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH-----------EDLI 453
D GS A +G + + + +
Sbjct: 2225 VISQLDTLQFTGSGLTARNLQLTQNGNNLEVSFENVANTKVTLQNFKLENLDNLSATSSR 2284
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
A + Q + + + + +DL N +
Sbjct: 2285 PALGNILFDGQTSITDSFDVIDANSTQTSIFTKNTVTFLNDLNNNITGFDNSNDVINGQG 2344
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE--EGRSITFNPDL 571
G L A ++ LI + AG D F +G +I +
Sbjct: 2345 GNDIINGLSGNDILRGGAGNDTLIGGAGNDMLRGGAGADRFLYNTGTAFKGSAIGVDTIT 2404
Query: 572 YLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLS 631
S + V +A +G S QF + +
Sbjct: 2405 DFNSSEGDKIVLNKTTFSAIISAPGNGFS-----QKSDFQF-------TNKAGTSTAKIV 2452
Query: 632 FDHKKVDLYTDYF 644
+D L+ +
Sbjct: 2453 YDPLSGHLFYNQN 2465
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 58/209 (27%), Gaps = 26/209 (12%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+I G + I + + + G SGND + G ++ +G+DV DG +G D
Sbjct: 1603 GNSKDDNILGSDIAEIIRGNGGLNIIYGGSGNDQLFGGDDSDFISGDAGSDVIDGGAGDD 1662
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
A V + + IL
Sbjct: 1663 LIDGDGILNSESTPNSSAANDVINGGQ-------------------------GDDILLGG 1697
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ LI G D+ + + G++ G+ + L + + SD
Sbjct: 1698 IGDDRLIPGKGDDLIDGGEGTDT-GVASGKQENYKIRKRLDGSVVVIDRRTSDNNEGLEL 1756
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLIN 454
Y E + + IN
Sbjct: 1757 YRDTERFEFSDRTLTIDKVPSSEGSASIN 1785
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 43/286 (15%), Positives = 80/286 (27%), Gaps = 21/286 (7%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
D IYD G ++ + L + I N+ + + + G+
Sbjct: 1931 DGAVNGVIYDPGVLAQVNTVRSSVSQT---LKDGIPNLILLGTDNINGTGNALDNQITGN 1987
Query: 275 SGNDVVIGNSANNVFFESSGNDV--FDGSSGLDTFFYYAPSY-----------LYKIYRF 321
SG++V+ G N+ + G D F G DT +A +F
Sbjct: 1988 SGDNVLYGGKGNDTLSGNGGQDTFVFRLGDGNDTITDFAGIGRGSNPSAKVITQLDTLQF 2047
Query: 322 ENAIIV---YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ ++ + E + + + ++ L T+S L ++
Sbjct: 2048 IGRGLTARNLQLTQNGNNLEVSFENVVNTKVTLQNFKLENLDNLSATSSRPALGNILFDG 2107
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
F + + F D N+ G D + G
Sbjct: 2108 QTSITDSFDVIDANSTQTSIFTKNTVTFLNDLNNNITGFDNSNDVIN-GQGGNDIINGLS 2166
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
L A ++ LI + G D F ++G D
Sbjct: 2167 GNDILRGGAGNDTLIGGAGNDILTGGTGNDTFVFH-PDDGNDTITD 2211
>gi|149204658|ref|ZP_01881623.1| hypothetical protein RTM1035_09738 [Roseovarius sp. TM1035]
gi|149141917|gb|EDM29967.1| hypothetical protein RTM1035_09738 [Roseovarius sp. TM1035]
Length = 1080
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 69/510 (13%), Positives = 128/510 (25%), Gaps = 75/510 (14%)
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
+ +L F N T +S D G T++
Sbjct: 578 DIENLHFV-----GSDDLTGIGNAADNTLLGNSGNNHLSGVWGDDTVSGEDGNDTLVGEV 632
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVD-NDYENDSFLTSVMSYFMPQDSMMDASFGYCA- 181
+ G H +G + G D DY + V+ D+++
Sbjct: 633 GDDLLIGGRGFDHLFGGDGHDTLRGGDQADYLSGGSADDVLHGGEGADTLIGGDGADIFV 692
Query: 182 ---TPMVSDIVA---------------------VQKIYGAPKGSLGNNI--YKIEVQQKD 215
M SDI+A + + + + + + +
Sbjct: 693 IDPASMSSDIIADFTIGVDRIDVSRWQLEAFSEIIISWIDGQTFVQDAVGSFFFIDNLSR 752
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYI--DLNTESWSSIG--------------GYEKN 259
D+ + D + N + ++ + S G ++
Sbjct: 753 GEGESLSVDNFILNADDEHIGSVENNTLAPSVSPPAASLHPPTPIMPGVAPVLQVGGTED 812
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS---------GLDTF--- 307
+ T +++ G++G D ++G+S N+ G+D+ +G G D
Sbjct: 813 DLLEGGTGADALAGNTGADTLLGHSGNDRLAGGDGDDLIEGGEGDDNLGGGLGADHLEGQ 872
Query: 308 --FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
F + D L+ E L
Sbjct: 873 AGNDTIGGGGGNDILFGGNGADVLSGGEGNDLLAGGE------GNDRLAGSFGHDTLRGG 926
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRG 420
+ + G+D+ E + E G EG DI D G D L G D
Sbjct: 927 NGNDRIGGGPGRDILEGGQGNDELGGGEGDDIVTGGAGDDFLAGGGREDLLDGGTGDDTL 986
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+EG + F + + L G + G
Sbjct: 987 NGGLGNDRLIGREGADVFIFNEFTAGERDVIVDFQVGED-HLRLAGIEGQGLNGRFLALT 1045
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
+ L + + A+ HY
Sbjct: 1046 IQDTDEGALLRHAGHEILLDDVTAASLSHY 1075
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 56/390 (14%), Positives = 104/390 (26%), Gaps = 40/390 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ S + S G D ++ G + + + +++ G N ++
Sbjct: 558 GNDTVQSSVDFVLRHASAGRD-IENLHFVGSDDLTGIGNAADNTLLGNSGNNHLSGVWGD 616
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRF 321
++V G GND ++G +++ G D G G DT + S ++
Sbjct: 617 DTVSGEDGNDTLVGEVGDDLLIGGRGFDHLFGGDGHDTLRGGDQADYLSGGSADDVLHGG 676
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI----LEYTASYEDLIQVIGQ 377
E A + D ++ + I + I + A E +I I
Sbjct: 677 EGADTLIGG--DGADIFV-IDPASMSSDIIADFTIGVDRIDVSRWQLEAFSEIIISWIDG 733
Query: 378 DVF---ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA------------ 422
F F+ LS G + ++ + DD + A
Sbjct: 734 QTFVQDAVGSFFFIDNLSRGEGESLSVDNFILNADDEHIGSVENNTLAPSVSPPAASLHP 793
Query: 423 -------ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ G E + + +A + + + G D
Sbjct: 794 PTPIMPGVAPVLQVGGTEDDLLEGGTGADALAGNTGADTLLGHSGNDRLAGGDGDDLIEG 853
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
EG N G + +G + L ++
Sbjct: 854 GEGDDNLGGGLGADHLEGQAGNDTIGGGGGNDILFGGNGADVLSGGEGNDLLAGGEGNDR 913
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
L +F G D G GR I
Sbjct: 914 LAGSFGHDTLRGGNGND---RIGGGPGRDI 940
>gi|294677596|ref|YP_003578211.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|3128319|gb|AAC16171.1| hypothetical protein [Rhodobacter capsulatus SB 1003]
gi|294476416|gb|ADE85804.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 643
Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/400 (13%), Positives = 108/400 (27%), Gaps = 45/400 (11%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN------ALHEIGHALGLM 135
I + T S + ++ ++ A + +
Sbjct: 6 IGGYSAASITSNGTSGFSLDPGYESASQAVTITVTDNDAYFSGSATSQLDGNQTAVVTSA 65
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G G + S T+ + ++++ TP V +
Sbjct: 66 SGAVLASGAVRLGTATSFTTASGTTARIYDVYVGNTLVGYVSTSALTPGVV----MTVTG 121
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
A S G + S + G+D + ++ G
Sbjct: 122 SASATSTGQTYSGLASTSYASTVSSALVGGAGNDSIRA-------------GAGNDTVTG 168
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N TI + + G+ GND+++G + N+ +G+D G +G D+ +
Sbjct: 169 NAGNDTIDGGAGNDRLSGNDGNDLILGGAGNDTLDGGAGDDTLAGGAGADSITGGSGMDY 228
Query: 316 YKIYRFENAIIV------YDANEHKQDFLSDVERLRFA---------DQCIDSVNVKQRS 360
A+ + + D L+ V+ + + D + S + +
Sbjct: 229 ADYSASSGAVTIDLSRWSAAGGDAAGDTLTSVDGVIGSAYGDSLIGFDDAVYSGSDVYTN 288
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD-- 418
I + + G D+ G D F D L G+D
Sbjct: 289 IFYGGGGDDTIDGRGGNDILYGGDDNDLILGGSGDDSLFGDAG----NDTLAGGAGADTL 344
Query: 419 -RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
GA A ++ + F+ D I+
Sbjct: 345 SGGAGADTFVLDAQSGADSITDFEFTMVGGKTRDQIDVSG 384
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 66/295 (22%), Gaps = 64/295 (21%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
S ++ ++ +GND +G DT + +
Sbjct: 133 SGLASTSYASTVSSALVGGAGNDSIRAGAGNDT-----------VTGNAGNDTIDGGA-- 179
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
++ A + L G D
Sbjct: 180 ---------------GNDRLSGNDGNDLILGGAGNDTLDGGAGDDTLAGGAGADSITGGS 224
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
G D Y D G+ +R G G + + A + D +
Sbjct: 225 GMD-----------YADYSASSGAVTIDLSRWSAAGGDAAGDTLTSVDGVIGSA-YGDSL 272
Query: 454 NAFADAPDLVQVGKDH--FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
F DA + + G + + LY G +DL D
Sbjct: 273 IGFDDAVYSGSDVYTNIFYGGGGDDTIDGRGGNDILYGGDDNDLILGGSGD--------- 323
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+L A ++ L AG D F SIT
Sbjct: 324 -------------DSLFGDAGNDTLAGGAGADTLSGGAGADTFVLDAQSGADSIT 365
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 61/248 (24%), Gaps = 46/248 (18%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + + D G G T+ I G+
Sbjct: 167 TGNAGNDTIDGGAGNDRLSGNDGNDLILGGAGNDTLDGGAGDDTLAGGAGADSITGGSGM 226
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ S ++ + + D +
Sbjct: 227 D------------------------YADYSASSGAVTIDLSRWSAAGGDAAGDTLTSVD- 261
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + G+++ + G D+ GG + +
Sbjct: 262 -GVIGSAYGDSLIGFDDAVYS-----------GSDVYTNIFYGGGGDDTIDGRGGNDILY 309
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N I + +S+ G +GN + +G D G +G DTF A S
Sbjct: 310 GGDDNDLILGGSGDDSLFGDAGN---------DTLAGGAGADTLSGGAGADTFVLDAQSG 360
Query: 315 LYKIYRFE 322
I FE
Sbjct: 361 ADSITDFE 368
>gi|38645|emb|CAA34731.1| leukotoxin [Aggregatibacter actinomycetemcomitans]
Length = 1055
Score = 79.8 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 60/174 (34%), Gaps = 13/174 (7%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
DLL+ Y + ++ + E+ I T+ + GS NDV G+
Sbjct: 686 GKVTDLLEYRNYKLDYYYTNKGFKAHDELNSVEE---IIGSTLRDKFYGSKFNDVFHGHD 742
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+++ + G+D G +G D + K+Y ++ E+ ++L E
Sbjct: 743 GDDLIYGYDGDDRLYGDNGNDEI--HGGQGNDKLYGGAGNDRLF--GEYGNNYLDGGE-- 796
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
IL + + L G D+ + + + EG DI
Sbjct: 797 ----GDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLDGGEGDDQLAGGEGNDIY 846
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 7/127 (5%)
Query: 200 GSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G G+++ Y + + I+ G+D L GG N + + G
Sbjct: 740 GHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKL----YGGAGNDRLFGEYGNNYLDGG 795
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
E + + + + G SGND + GN +++ G+D G G D + Y +
Sbjct: 796 EGDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLDGGEGDDQLAGGEGNDIYVYRKEYGHH 855
Query: 317 KIYRFEN 323
I
Sbjct: 856 TITEHSG 862
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 4/131 (3%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ T+ D + G + + + + G N I + +
Sbjct: 715 NSVEEIIGSTLRDKFYGSKFNDVFHGHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKL 774
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G +GND + G NN G+D +G +G D S K++ + ++
Sbjct: 775 YGGAGNDRLFGEYGNNYLDGGEGDDHLEGGNGSDILR--GGSGNDKLFGNQGDDLL--DG 830
Query: 332 EHKQDFLSDVE 342
D L+ E
Sbjct: 831 GEGDDQLAGGE 841
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/188 (12%), Positives = 54/188 (28%), Gaps = 28/188 (14%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G++ + I + + + G +GND + G N+ + +GND G G + +
Sbjct: 735 NDVFHGHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKLYGGAGNDRLFGEYGNN--YL 792
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + I+ + + +L+ +
Sbjct: 793 DGGEGDDHLEGGNGSDILRGGS-----------------GNDKLFGNQGDDLLDGGEGDD 835
Query: 370 DLIQVIGQDV----FESMKHFYEFGLSEGR-----DITFDSYLYLGSYDDLRNVFGSDRG 420
L G D+ E H + +I + + +DL +
Sbjct: 836 QLAGGEGNDIYVYRKEYGHHTITEHSGDKDKLSLANINLKDVSFERNGNDLLLKTNNRTA 895
Query: 421 AAARHYIT 428
+ + +
Sbjct: 896 VTFKGWFS 903
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 5/131 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIA 263
IY GDD L GG N + G N +
Sbjct: 734 FNDVFHGHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKLYGGAGNDRLFGEYGNNYLD 793
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G +G+D++ G S N+ F + G+D+ DG G D + +Y +
Sbjct: 794 GGEGDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLDGGEGDDQLAGGEGNDIYVYRKEYG 853
Query: 324 AIIVYDANEHK 334
+ + + K
Sbjct: 854 HHTITEHSGDK 864
Score = 47.1 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 51/239 (21%), Gaps = 57/239 (23%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI-------------------- 325
++ F SG+ + + G D Y NA
Sbjct: 618 DDYVFVGSGSTIVNAGDGYDVVDYSKGRTGALTIDGRNATKAGQYKVERDLSGTQVLQET 677
Query: 326 ------------------------IVYDANEHKQDFLSDVERLRFAD---------QCID 352
+ D L+ VE + +
Sbjct: 678 VSKQETKRGKVTDLLEYRNYKLDYYYTNKGFKAHDELNSVEEIIGSTLRDKFYGSKFNDV 737
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY--LYLGSYDD 410
++ + L G D + + G D F Y YL +
Sbjct: 738 FHGHDGDDLIYGYDGDDRLYGDNGNDEIHGGQGNDKLYGGAGNDRLFGEYGNNYLDGGEG 797
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
++ G + R G + L+ + L + + + H
Sbjct: 798 DDHLEGGNGSDILR--GGSGNDKLFGNQGDDLLDGGEGDDQLAGGEGNDIYVYRKEYGH 854
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 42/159 (26%), Gaps = 16/159 (10%)
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D L+ VE + + K + + + G D E +G
Sbjct: 711 HDELNSVEEIIGSTLRDKFYGSKFNDVFHGHDGDDLIYGYDGDDRLYGDNGNDEIHGGQG 770
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
D LY G+ +D FG EG N L + ++ L
Sbjct: 771 ND-----KLYGGAGNDRL--FGEYGNNYLDGGEGDDHLEGGNGS--DILRGGSGNDKLFG 821
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
D G D + D Y+Y Y
Sbjct: 822 NQGDDLLDGGEGDDQLAGGE-------GNDIYVYRKEYG 853
Score = 42.1 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 49/195 (25%), Gaps = 11/195 (5%)
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
A + + G + + + S+GR + G + +R +
Sbjct: 613 NLGAKDDYVFVGSGSTIVNAGDGYDVVDYSKGRT---GALTIDGRNATKAGQYKVERDLS 669
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF-- 480
+ V + + L + + + R
Sbjct: 670 GTQVLQETVSKQETKRGKVTDLLEYRNYKLDYYYTNKGFKAHDELNSVEEIIGSTLRDKF 729
Query: 481 --VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
F+ + DDL +G D Y +G E L A ++ L
Sbjct: 730 YGSKFNDVFHGHDGDDLI--YGYDGDDRL--YGDNGNDEIHGGQGNDKLYGGAGNDRLFG 785
Query: 539 AFADAPDLVQAGKDH 553
+ + G DH
Sbjct: 786 EYGNNYLDGGEGDDH 800
>gi|297537207|ref|YP_003672976.1| Hemolysin-type calcium-binding region [Methylotenera sp. 301]
gi|297256554|gb|ADI28399.1| Hemolysin-type calcium-binding region [Methylotenera sp. 301]
Length = 1902
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 73/575 (12%), Positives = 144/575 (25%), Gaps = 85/575 (14%)
Query: 62 WSKVVDLTFEETSIHSDIKFISSNNGYVCTP------------------------RYDSR 97
+S V+ TF++ I N+ T ++
Sbjct: 1017 FSDGVNYTFDQLMAAYPIALTDGNDSANFTSGNVEIVHAGAGDDTVSTFGGDDVIDGEAG 1076
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP------------ 145
D D G G + + G G
Sbjct: 1077 NDYLNGGDGNDTLYGGSGNDNLSGDTGNDVLDGGTGDDTMSGGEGNDTYTIDVLTDVITE 1136
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
D N + T+ +Y + + A ++ + + I A +L +
Sbjct: 1137 NLNEGTDLVNVAIATASGTYTVAANVENATLINTVAYSLIGNALDNILIGNAAVNTLNGD 1196
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK------- 258
T+ G+D + + + + +L+ + +
Sbjct: 1197 A--GNDILDGGTGADTMKGGKGNDTYIVDNVADIVSE-NLDEGTDTVQSSATYLLTANIE 1253
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+T+ + I + VG++ ++++IGNSANN ++G D G G DT+ + +
Sbjct: 1254 NLTLTGNVAI-NGVGNALDNIMIGNSANNTLNGAAGADTMIGGLGNDTYTIDMLTDVVTE 1312
Query: 319 YRFENAIIVYDA---NEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQV 374
E +V A ++VE + +IL A+ L
Sbjct: 1313 NLNEGTDLVNVAIATTGGAYTVAANVENATLTNTVTYSLTGNALDNILIGNAAVNTLNGG 1372
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDS---------------------YLYLGSYDDLRN 413
G D + G DI G+Y N
Sbjct: 1373 AGNDTLNGLAGSDTMIGGLGNDIYTIDVLTDVITENLNEGTDLVNVAIATASGTYTVAAN 1432
Query: 414 VFGSDRGAAARHYIT----------HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
V + + +T + + A + D +
Sbjct: 1433 VENATLTNTVAYSLTGNVLDNVLTGNAAANTLDGGAGNDTLNGLAGNDTMIGGLGNDTYT 1492
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
EG + + + + + Y G +
Sbjct: 1493 IDALTDVVTENLNEGTDLVNVAIATASGTYTVAANVENANLVNSVAYTLSGNELNNVLTG 1552
Query: 524 F---KALEYIASHEDLINAFADAPDLVQAGKDHFS 555
L +A ++ L + G D +
Sbjct: 1553 NAYANTLNGLAGNDTLNGGAGVDTLVGGDGDDTYI 1587
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/405 (13%), Positives = 105/405 (25%), Gaps = 54/405 (13%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
N V T + +D G+G I L +
Sbjct: 1362 GNAAVNTLNGGAGNDTLNGLAGSDTMIGGLGNDIYTIDVLTDVITENL------NEGTDL 1415
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ + +V + + + + + A GA
Sbjct: 1416 VNVAIATASGTYTVAANVENATLTNTVAYSLTGNVLDNVLTGNAAANTLDGGA------- 1468
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLD--------LTLIGGVKNYIDLNTESWSSIGGY 256
T+ G+D + + +++ + S
Sbjct: 1469 ----GNDTLNGLAGNDTMIGGLGNDTYTIDALTDVVTENLNEGTDLVNVAIATASGTYTV 1524
Query: 257 EKNMTIAQ--HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N+ A ++V ++ G+ N+V+ GN+ N +GND +G +G+DT
Sbjct: 1525 AANVENANLVNSVAYTLSGNELNNVLTGNAYANTLNGLAGNDTLNGGAGVDTLVGGDGDD 1584
Query: 315 LYKIYRFENAIIVYDANEHKQDFL-----------SDVERLRFADQCIDSVNVKQ----- 358
Y + + I D D + S++E L +
Sbjct: 1585 TYIVDTTTDVITEADTVGAGVDTVQSSVTYVLGATSNLENLTLTGTTAINATGNALANFM 1644
Query: 359 ------RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGS 407
+I + + L G D F F G D+ D +
Sbjct: 1645 KGNSANNTITDTAGGNDILQAFAGNDTFNDTVGNNLFDGGLGNDLITAGSGRDIIIGGQG 1704
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
D + G D + + D +L ++ DL
Sbjct: 1705 NDTITTGTGYDVIVFNKGDGQDIINASTGADNTISLGGNFAYSDL 1749
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 69/505 (13%), Positives = 129/505 (25%), Gaps = 33/505 (6%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
F S+ DS D+ G + + G
Sbjct: 696 FNSNGTTSDDVIVDDSASDNLSGGSGNDILFGLAGNDNLSGDTGNDVLDGGTGDDTMSGG 755
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G ++ + S + T + ++ YG
Sbjct: 756 EGSDTYVVRTGSGQDVINNINNSSEAVTDTLQFADIASTGLTSLSRQGSSLIIGYGNGDS 815
Query: 201 ------SLGNNIYKIEVQQKDSPFIQT---------IYDSGGDDLLDLTLIG------GV 239
G++ Y++ + T I + G+D + T G
Sbjct: 816 VKLQYQFYGDSSYQVTQFKFSDGVNYTFDQLMAAYPIALTDGNDSANFTSGNVEIVHAGA 875
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ I G N + +++ G SGND + G++ N+V +G+D
Sbjct: 876 GDDTVSTFGGDDVIDGEAGNDYLNGGDGNDTLYGGSGNDNLSGDTGNDVLDGGTGDDTMS 935
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQ 358
G G DT+ S I N+ D + + L +
Sbjct: 936 GGEGSDTYVVRTGSGQDVINNINNSSEAVTDTLQFADIASTGLTSLSRQGSSLIIGYGNG 995
Query: 359 RSI-----LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
S+ +SY+ V + D + G+ + +
Sbjct: 996 DSVKLQYQFYGDSSYQVTQFKFSDGVNYTFDQLMAAYPIALTDGNDSANFTSGNVEIVHA 1055
Query: 414 VFGSDRGAAARH----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
G D + G D L + +++L + G D
Sbjct: 1056 GAGDDTVSTFGGDDVIDGEAGNDYLNGGDGNDTLYGGSGNDNLSGDTGNDVLDGGTGDDT 1115
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
S + + + + + ++ ++ A+ Y E A
Sbjct: 1116 MSGGEGNDTYTIDVLTDVITENLNEGTDLVNVAIATASGTYTVAANVENATLINTVAYSL 1175
Query: 530 IASHED--LINAFADAPDLVQAGKD 552
I + D LI A AG D
Sbjct: 1176 IGNALDNILIGNAAVNTLNGDAGND 1200
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 65/288 (22%), Gaps = 38/288 (13%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ N T + D G+G T + L
Sbjct: 1456 TGNAAANTLDGGAGNDTLNGLAGNDTMIGGLGNDTYTIDALTDVVTENLNEGTDLVNVAI 1515
Query: 144 YPVYGVDNDYENDSFLTSVMS--YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G N V S Y + + + + G ++ + + G
Sbjct: 1516 ATASGTYTVAANVENANLVNSVAYTLSGNELNNVLTGNAYANTLNGLAGNDTLNGGAGVD 1575
Query: 202 L-----GNNIYKIEVQQKDSPFIQTI-------------------------------YDS 225
G++ Y ++ T+ ++
Sbjct: 1576 TLVGGDGDDTYIVDTTTDVITEADTVGAGVDTVQSSVTYVLGATSNLENLTLTGTTAINA 1635
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+ L + N I + + N T G GND++ S
Sbjct: 1636 TGNALANFMKGNSANNTITDTAGGNDILQAFAGNDTFNDTVGNNLFDGGLGNDLITAGSG 1695
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
++ GND +G D + I A +
Sbjct: 1696 RDIIIGGQGNDTITTGTGYDVIVFNKGDGQDIINASTGADNTISLGGN 1743
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/396 (12%), Positives = 95/396 (23%), Gaps = 70/396 (17%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ + G + + ++ + ++ G N + +++ G +GNDV+ G + ++
Sbjct: 692 NTMGFNSNGTTSDDVIVDDSASDNLSGGSGNDILFGLAGNDNLSGDTGNDVLDGGTGDDT 751
Query: 289 FFESSGNDVF--DGSSGLDTFFYYAPSYLYKI------------------------YRFE 322
G+D + SG D S +
Sbjct: 752 MSGGEGSDTYVVRTGSGQDVINNINNSSEAVTDTLQFADIASTGLTSLSRQGSSLIIGYG 811
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCI-----------------------------DS 353
N V + D V + +F+D
Sbjct: 812 NGDSVKLQYQFYGDSSYQVTQFKFSDGVNYTFDQLMAAYPIALTDGNDSANFTSGNVEIV 871
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ + + G D G D D L
Sbjct: 872 HAGAGDDTVSTFGGDDVIDGEAGNDYLNGGDGNDTLYGGSGNDNLSGDTG----NDVLDG 927
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA---SHEDLINAFADAPDLVQVGKDHF 470
G D + T+ V+ G D + + + A +
Sbjct: 928 GTGDDTMSGGEGSDTYVVRTGSGQDVINNINNSSEAVTDTLQFADIASTGLTSLSRQGSS 987
Query: 471 SNFGCEEGRFVTFDSYLYLGS--------YDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
G G V Y S + D N AA +T G
Sbjct: 988 LIIGYGNGDSVKLQYQFYGDSSYQVTQFKFSDGVNYTFDQLMAAYPIALTDGNDSANFTS 1047
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
+ + + +D ++ F + + + N G
Sbjct: 1048 GNVEIVHAGAGDDTVSTFGGDDVIDGEAGNDYLNGG 1083
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 80/247 (32%), Gaps = 19/247 (7%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYA 311
N + ++T+ + G++ +DV++ +SA++ SGND+ G +G D
Sbjct: 686 NGAMVKNTMGFNSNGTTSDDVIVDDSASDNLSGGSGNDILFGLAGNDNLSGDTGNDVLDG 745
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER--------LRFADQCIDSVNVKQRSILE 363
+ + E + QD ++++ L+FAD + R
Sbjct: 746 GTGDDTMSGGEGSDTYVVRTGSGQDVINNINNSSEAVTDTLQFADIASTGLTSLSRQGSS 805
Query: 364 YTASYEDLIQVIGQDVFESMKHFY--EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
Y + V Q F + +F S+G + TFD + ++ +
Sbjct: 806 LIIGYGNGDSVKLQYQFYGDSSYQVTQFKFSDGVNYTFDQLMAAYPIALTDGNDSANFTS 865
Query: 422 AARHYITHGVKEGR--NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ G + ++ A ++ L + G D+ S +
Sbjct: 866 GNVEIVHAGAGDDTVSTFGGDDVIDGEAGNDYLNGGDGNDTLYGGSGNDNLSGDTGNDVL 925
Query: 480 FVTFDSY 486
Sbjct: 926 DGGTGDD 932
>gi|300868951|ref|ZP_07113555.1| hypothetical protein OSCI_3880008 [Oscillatoria sp. PCC 6506]
gi|300333018|emb|CBN58747.1| hypothetical protein OSCI_3880008 [Oscillatoria sp. PCC 6506]
Length = 1075
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 65/202 (32%), Gaps = 10/202 (4%)
Query: 204 NNIYK--IEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGY 256
+ IY + S ++ + G+D +D T+ GG + + G
Sbjct: 802 DTIYGMENDDNLSGSSGSDELFGNTGNDYIDGGTEQDTIYGGKDGDAIIGGNGNDLLRGD 861
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N TI + +S+ G ND+++G + N+ + + G D G G D F
Sbjct: 862 SDNDTIFGGSDSDSIFGGKDNDLLLGENGNDTIYGNLGTDSILGGDGNDLIF--GNEDAD 919
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV-KQRSILEYTASYEDLIQVI 375
I + +Y E+ D L + D V+ + + L
Sbjct: 920 LILGDIDNDTIYGGKENDTLCGGDGNDLLLGNNNDDLVDGCIGDDTIYGGKENDSLTGGS 979
Query: 376 GQDVFESMKHFYEFGLSEGRDI 397
G D G D+
Sbjct: 980 GNDFLSGDLGNDTLIGGSGNDV 1001
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 76/258 (29%), Gaps = 11/258 (4%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ D + N + + + + +I G N TI +++ GSSG+D + GN+ N+
Sbjct: 771 NTPDNAVSATNSNDLLMGSTANDAIDGLGGNDTIYGMENDDNLSGSSGSDELFGNTGNDY 830
Query: 289 FFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ D G D S I+ ++ ++ ++ +
Sbjct: 831 IDGGTEQDTIYGGKDGDAIIGGNGNDLLRGDSDNDTIFGGSDSDSIFGGKDNDLLLGENG 890
Query: 342 ERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--- 397
+ + + ++ + ++ I D K +G D+
Sbjct: 891 NDTIYGNLGTDSILGGDGNDLIFGNEDADLILGDIDNDTIYGGKENDTLCGGDGNDLLLG 950
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
+ L G D G + + + D ++ +
Sbjct: 951 NNNDDLVDGCIGDDTIYGGKENDSLTGGSGNDFLSGDLGNDTLIGGSGNDVFLLVVGQGS 1010
Query: 458 DAPDLVQVGKDHFSNFGC 475
D Q G+D G
Sbjct: 1011 DTILDFQQGQDSIGLSGG 1028
Score = 44.0 bits (102), Expect = 0.092, Method: Composition-based stats.
Identities = 42/225 (18%), Positives = 66/225 (29%), Gaps = 37/225 (16%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
N + D G G + + I G S GG
Sbjct: 824 GNTGNDYIDGGTEQDTIYGGKDGDAIIGGNGNDLLRGDSDNDTI---FGGSDSDSIFGGK 880
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ + ND+ ++ + + D FG ++ + IYG +
Sbjct: 881 DNDLLLGENGNDTIYGNLGTDSILGGDGNDLIFGNEDADLILGDIDNDTIYGGKEN---- 936
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T+ G+DLL L + + G + TI
Sbjct: 937 ---------------DTLCGGDGNDLL-------------LGNNNDDLVDGCIGDDTIYG 968
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDV--FDGSSGLDTF 307
+S+ G SGND + G+ N+ SGNDV G DT
Sbjct: 969 GKENDSLTGGSGNDFLSGDLGNDTLIGGSGNDVFLLVVGQGSDTI 1013
>gi|207727685|ref|YP_002256079.1| hemolysin-type calcium-binding protein (partial sequence n terminus)
[Ralstonia solanacearum MolK2]
gi|206590926|emb|CAQ56538.1| hemolysin-type calcium-binding protein (partial sequence n terminus)
[Ralstonia solanacearum MolK2]
Length = 1117
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 64/531 (12%), Positives = 128/531 (24%), Gaps = 65/531 (12%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+I ++ + + T + + D G G I + +
Sbjct: 517 ATIGTENNDAFAGDASANTFNAGAGNDLLDGQAGNDNLSGGAGDDVIYGGDGNDFLQGND 576
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFL-TSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G G + G D + D++ D
Sbjct: 577 GADTLDGGTGDDTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQ-- 634
Query: 192 QKIYGAPKGSLGN-NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
IY S G N+ + + + + G DL+ K ++
Sbjct: 635 DFIYSDYDTSAGKLNVIQFKD---GVAPSEVVVTRSGSDLVLSITGTTDKITANMAFYWD 691
Query: 251 SSIGGYE--KNMTIAQHTVIE-------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ Y + + + T + +++G ++G + + GND G
Sbjct: 692 DTANPYNPIQQVKFSDGTTWDLATIKAKALIGDDSAQTLVGYTEADTINALGGNDNVYGQ 751
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G D + +Y E + +
Sbjct: 752 GGDD--VLDGGAGNDTLYGGEGNDTLRGGAD--------------------------NDN 783
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L + L G D + +G F Y S + L + D
Sbjct: 784 LYGGNGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVL 843
Query: 422 AARHYITHGVKEGR------------NPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ +T + N + + F+D
Sbjct: 844 PSEVVVTRSGSDLVLSIAGTADKITANMAFYWDDTANPYNPIQQVKFSDGTAWDLATIKA 903
Query: 470 FSNFGCEEGRF----VTFDSYLYLGSYDDLRNVFGSDR----GAAARHYITHGVKEGRNP 521
+ G + + D+ LG D++ G D Y G R
Sbjct: 904 KALIGDDSAQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGG 963
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFS-NFGYEEGRSITFNPDL 571
D +L ++ L + + G D + N G+ + ++
Sbjct: 964 DDNDSLYGGNGNDVLEGGTGNDYLSGEGGSDTYVFNSGWGQDTINNYDTTS 1014
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/364 (12%), Positives = 94/364 (25%), Gaps = 45/364 (12%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
++ +V + D+ D T G N + ++ G + I
Sbjct: 506 SVTGFDVFAAAATIGTENNDAFAGDASANTFNAGAGNDLLDGQAGNDNLSGGAGDDVIYG 565
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G+ G D + G + ++ +G+D G +G DT + +
Sbjct: 566 GDGNDFLQGNDGADTLDGGTGDDTLDGGTGDDTLYGGAGNDTL--DGGTGNDTLSGEGGN 623
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
QD ++D + + + A E ++ G D+ S+
Sbjct: 624 DTYLFGKGDGQD-------FIYSDYDTSAGKLNVIQFKDGVAPSEVVVTRSGSDLVLSIT 676
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ D +G
Sbjct: 677 GT------------------TDKITANMAFYWDDTANPYNPIQQVKFSDGTTW------- 711
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
DL A A + + + + +Y DD+ + +
Sbjct: 712 ------DLATIKAKALIGDDSAQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDT 765
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
Y G R L ++ L + + G D + FG +G+
Sbjct: 766 L----YGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEGGNDTYL-FGKGDGQD 820
Query: 565 ITFN 568
++
Sbjct: 821 FIYS 824
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/308 (13%), Positives = 81/308 (26%), Gaps = 16/308 (5%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ T R + + D G G T+
Sbjct: 755 DVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEGGNDTYLFG 814
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-IVA 190
G Y+ + + S + +D I A
Sbjct: 815 KGDGQDFIYSDYDTSAN-----KLNVIQFKDGVLPSEVVVTRSGSDLVLSIAGTADKITA 869
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYID---- 244
Y + N I +++ + + TI GDD + + I+
Sbjct: 870 NMAFYWDDTANPYNPIQQVKFSDGTAWDLATIKAKALIGDDSAQTLVGYTEADTINALGG 929
Query: 245 ----LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ G N T+ +++ G ND + G + N+V +GND G
Sbjct: 930 NDNVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGDDNDSLYGGNGNDVLEGGTGNDYLSG 989
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
G DT+ + + I ++ D + +D R + ++ +
Sbjct: 990 EGGSDTYVFNSGWGQDTINNYDTTSGRSDVITFGEGIATDQLWFRRVNADLEVSLIGSTD 1049
Query: 361 ILEYTASY 368
+ Y
Sbjct: 1050 KTTLSNWY 1057
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 53/456 (11%), Positives = 103/456 (22%), Gaps = 101/456 (22%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ D N T + D G G T+ +
Sbjct: 561 DVIYGGDGNDFLQGNDGADTLDGGTGDDTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGE 620
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQ------DSMMDASFGYCATPMV 185
G + G + +DY+ + +V+ + + + T
Sbjct: 621 -GGNDTYLFGKGDGQDFIYSDYDTSAGKLNVIQFKDGVAPSEVVVTRSGSDLVLSITGTT 679
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQK--------------DSPFIQTIYDSGGDDLL 231
I A Y + N I +++ QT+ D +
Sbjct: 680 DKITANMAFYWDDTANPYNPIQQVKFSDGTTWDLATIKAKALIGDDSAQTLVGYTEADTI 739
Query: 232 DLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
+ G + + ++ G E N T+ +++ G +GND + G + N
Sbjct: 740 NALGGNDNVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGN 799
Query: 287 NVFFE-----------SSGNDVFDGSSGLDT------------------FFYYAPSYLYK 317
+ G D S DT
Sbjct: 800 DTLSGEGGNDTYLFGKGDGQDFIY--SDYDTSANKLNVIQFKDGVLPSEVVVTRSGSDLV 857
Query: 318 IYRFENAIIVYDANEHKQDFLSD----VERLRFADQC----------------------- 350
+ A + D ++ +++++F+D
Sbjct: 858 LSIAGTADKITANMAFYWDDTANPYNPIQQVKFSDGTAWDLATIKAKALIGDDSAQTLVG 917
Query: 351 -------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ +L+ A + L G D G D+
Sbjct: 918 YTEADTINALGGNDNVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGDDNDSLYGGNGNDV 977
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
D L GSD + +
Sbjct: 978 LEGGTG----NDYLSGEGGSDTYVFNSGWGQDTINN 1009
>gi|229825053|ref|ZP_04451122.1| hypothetical protein GCWU000182_00403 [Abiotrophia defectiva ATCC
49176]
gi|229790425|gb|EEP26539.1| hypothetical protein GCWU000182_00403 [Abiotrophia defectiva ATCC
49176]
Length = 1110
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 62/186 (33%), Gaps = 17/186 (9%)
Query: 204 NNIYKIEVQQKDSPFIQTIY-DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I++ ++ I S +D ++ G N I E +I G N ++
Sbjct: 938 GTIFRSSSSNENGTITDDIISGSSANDSIN----GDAGNDIIYGKEGNDTIYGGNGNDSL 993
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+S+ GNDV+IG + ++ G D+ DG +G D + + Y
Sbjct: 994 NGGEGDDSLYADVGNDVLIGGAGDDTLVGGEGEDILDGGAGNDKLYGGNSNG----YSVG 1049
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ D + D N+ E + LI+ G ++
Sbjct: 1050 GNDTYIFGRGYGVDTIR--------DADTTEGNLDVIKTKEDIKPGDILIKRTGNNLELI 1101
Query: 383 MKHFYE 388
+K +
Sbjct: 1102 VKGTSD 1107
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 57/161 (35%), Gaps = 13/161 (8%)
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
D+ + I+ + + I + S +I G+D++ G N
Sbjct: 929 AAAIDLSGIGTIFRSSSSNENGTI--TDDIISGSSANDSINGDAGNDII----YGKEGND 982
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS- 301
S+ G E + ++ + ++G +G+D ++G ++ +GND G
Sbjct: 983 TIYGGNGNDSLNGGEGDDSLYADVGNDVLIGGAGDDTLVGGEGEDILDGGAGNDKLYGGN 1042
Query: 302 ------SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
G DT+ + + I + D + K+D
Sbjct: 1043 SNGYSVGGNDTYIFGRGYGVDTIRDADTTEGNLDVIKTKED 1083
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 52/161 (32%), Gaps = 28/161 (17%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S S+ G + I+ + +S+ G +GND++ G N+ + +GND +G G D+ +
Sbjct: 944 SSSNENGTITDDIISGSSANDSINGDAGNDIIYGKEGNDTIYGGNGNDSLNGGEGDDSLY 1003
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
++ D L E L S
Sbjct: 1004 ADV-----------GNDVLIGG--AGDDTLVGGE------GEDILDGGAGNDKLYGGNSN 1044
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ G D + + + G D D+ G+ D
Sbjct: 1045 GYSVG--GNDTYIFGRGY-------GVDTIRDADTTEGNLD 1076
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 56/205 (27%), Gaps = 46/205 (22%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
++ I+ Y + ++ I S+ N + +++ SS ND
Sbjct: 911 NQDLINFRNYFADKSEEYAAAIDLSGIGTIFRSSSSNENGTIT----DDIISGSSANDSI 966
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+G +G D + + D
Sbjct: 967 NGDAGNDIIY----------------------GKEGNDT---------------IYGGNG 989
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT----FDSYLYLGSYDDLRNV 414
L + L +G DV EG DI + LY G+ + +V
Sbjct: 990 NDSLNGGEGDDSLYADVGNDVLIGGAGDDTLVGGEGEDILDGGAGNDKLYGGNSNGY-SV 1048
Query: 415 FGSDRGAAARHYITHGVKEGRNPDA 439
G+D R Y +++ +
Sbjct: 1049 GGNDTYIFGRGYGVDTIRDADTTEG 1073
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 37/136 (27%), Gaps = 7/136 (5%)
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
Y I I ++ ++ ++D + + + I+ + +
Sbjct: 928 YAAAIDLSGIGTIFRSSSSNENGTITD-DIISGSSANDSINGDAGNDIIYGKEGNDTIYG 986
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
G D + G D+ D L G +D+ + + + +
Sbjct: 987 GNGNDSLNGGEGDDSLYADVGNDVLIGGAGDDTLVGGEGEDILDGGAGNDKLYGGNS--N 1044
Query: 430 GVKEGRNPDAFKALEY 445
G G N Y
Sbjct: 1045 GYSVGGNDTYIFGRGY 1060
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 16/135 (11%), Positives = 29/135 (21%)
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
F + I+ +++ + + G D+ + G D
Sbjct: 941 FRSSSSNENGTITDDIISGSSANDSINGDAGNDIIYGKEGNDTIYGGNGNDSLNGGEGDD 1000
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
Y D+ N G L S+ +
Sbjct: 1001 SLYADVGNDVLIGGAGDDTLVGGEGEDILDGGAGNDKLYGGNSNGYSVGGNDTYIFGRGY 1060
Query: 466 GKDHFSNFGCEEGRF 480
G D + EG
Sbjct: 1061 GVDTIRDADTTEGNL 1075
>gi|325136541|gb|EGC59145.1| iron-regulated protein FrpA [Neisseria meningitidis M0579]
Length = 669
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/258 (15%), Positives = 78/258 (30%), Gaps = 11/258 (4%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 305 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 364
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 365 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 424
Query: 188 --IVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y +Y + G+DLL+ G N
Sbjct: 425 VLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLN----GDAGNDS 480
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 481 IYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 540
Query: 304 LDTFFYYAPSYLYKIYRF 321
DT+ + +Y +
Sbjct: 541 SDTYVFGEGFGQDTVYNY 558
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 76/288 (26%), Gaps = 60/288 (20%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 310 GHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 369
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV- 354
+ V ++ ++ + F + + V
Sbjct: 370 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 429
Query: 355 --------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L S L +G D G D +Y G
Sbjct: 430 TVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLNGDAGND-----SIYSG 484
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ +D N + Y +G + L ++ LI + G
Sbjct: 485 NGNDTLNGGEGNDAL----YGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 540
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
D + EG ++ D AA H+I G
Sbjct: 541 SDTYVFG---EGFGQDTVYNYHVDKNSDTM--HFKGFKAADVHFIRSG 583
>gi|261868477|ref|YP_003256399.1| hemolysin A [Aggregatibacter actinomycetemcomitans D11S-1]
gi|293390491|ref|ZP_06634825.1| hemolysin A [Aggregatibacter actinomycetemcomitans D7S-1]
gi|261413809|gb|ACX83180.1| hemolysin A [Aggregatibacter actinomycetemcomitans D11S-1]
gi|290951025|gb|EFE01144.1| hemolysin A [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 1055
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 12/140 (8%)
Query: 192 QKIYGAPKG-----SLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
YG+ G+++ Y + + I+ G+D L GG N
Sbjct: 727 DHFYGSRFNDVFHGHDGDDVIYGYDGDDRLYGDNGNDEIHGGKGNDKL----YGGAGNDR 782
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + G E + + + + G SGND + GN +++ G+D G G
Sbjct: 783 LFGEYGNNYLDGGEGDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLDGGKGDDQLAGGEG 842
Query: 304 LDTFFYYAPSYLYKIYRFEN 323
D + Y + I
Sbjct: 843 NDIYVYRKEYGHHTITEHSG 862
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 42/146 (28%), Gaps = 19/146 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + G G+DV+ G ++ + +GND G G D +
Sbjct: 720 IIGSKLRDHFYGSRFNDVFHGHDGDDVIYGYDGDDRLYGDNGNDEIHGGKGNDKLY--GG 777
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +++ + IL + + L
Sbjct: 778 AGNDRLFGEYGNNYLDGGEGDDH-----------------LEGGNGSDILRGGSGNDKLF 820
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDIT 398
G D+ + K + EG DI
Sbjct: 821 GNQGDDLLDGGKGDDQLAGGEGNDIY 846
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 54/187 (28%), Gaps = 19/187 (10%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G N H + + G G+D + G++ N+ GND G +G D F
Sbjct: 727 DHFYGSRFNDVFHGHDGDDVIYGYDGDDRLYGDNGNDEIHGGKGNDKLYGGAGNDRLF-- 784
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ N + + + + + LR + +L+ +
Sbjct: 785 --------GEYGNNYLDGGEGDDHLEGGNGSDILRGGSGNDKLFGNQGDDLLDGGKGDDQ 836
Query: 371 LIQVIGQDV----FESMKHFYEFGLSEGR-----DITFDSYLYLGSYDDLRNVFGSDRGA 421
L G D+ E H + +I + + +DL +
Sbjct: 837 LAGGEGNDIYVYRKEYGHHTITEHSGDKDKLSLANINLKEVSFERNGNDLLLKTNNRTAV 896
Query: 422 AARHYIT 428
+ +
Sbjct: 897 TFKGWFN 903
Score = 47.1 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 25/230 (10%), Positives = 46/230 (20%), Gaps = 44/230 (19%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI-------------------- 325
++ F SG+ + + G D Y NA
Sbjct: 618 DDYVFVGSGSTIVNAGDGYDVVDYSKGRTGALTIDGRNATKAGQYKVERDLSGTQVLQET 677
Query: 326 ------------------------IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ D L+ VE + + + +
Sbjct: 678 VSKQETKRGKVTDLLEYRNYKLDYYYTNKGFKAHDELNSVEEIIGSKLRDHFYGSRFNDV 737
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + G D E +G D + + + N +
Sbjct: 738 FHGHDGDDVIYGYDGDDRLYGDNGNDEIHGGKGNDKLYGGAGNDRLFGEYGNNYLDGGEG 797
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+G R L + L D G D +
Sbjct: 798 DDHLEGGNGSDILRGGSGNDKLFGNQGDDLLDGGKGDDQLAGGEGNDIYV 847
Score = 42.1 bits (97), Expect = 0.35, Method: Composition-based stats.
Identities = 24/195 (12%), Positives = 50/195 (25%), Gaps = 11/195 (5%)
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
A + + G + + + S+GR + G + +R +
Sbjct: 613 NLGAKDDYVFVGSGSTIVNAGDGYDVVDYSKGRT---GALTIDGRNATKAGQYKVERDLS 669
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF-- 480
+ V + + L + + + + R
Sbjct: 670 GTQVLQETVSKQETKRGKVTDLLEYRNYKLDYYYTNKGFKAHDELNSVEEIIGSKLRDHF 729
Query: 481 --VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
F+ + DD+ +G D Y +G E L A ++ L
Sbjct: 730 YGSRFNDVFHGHDGDDVI--YGYDGDDRL--YGDNGNDEIHGGKGNDKLYGGAGNDRLFG 785
Query: 539 AFADAPDLVQAGKDH 553
+ + G DH
Sbjct: 786 EYGNNYLDGGEGDDH 800
>gi|300864907|ref|ZP_07109751.1| hypothetical protein OSCI_1150001 [Oscillatoria sp. PCC 6506]
gi|300337078|emb|CBN54901.1| hypothetical protein OSCI_1150001 [Oscillatoria sp. PCC 6506]
Length = 1078
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 53/362 (14%), Positives = 97/362 (26%), Gaps = 26/362 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ GDD + + DLN + G N + + +
Sbjct: 679 NDLIWGDLNSDILIGDSGDDTI--FGGVNDLSVSDLNP---DLLFGGSGNDYLNGNEGDD 733
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+V+G G D+ G N+ F +D G G DT S + +I D
Sbjct: 734 TVIGGEGKDIAYGGKGNDWIFGQLDSDTLYGGEGNDTILGDRGSNGEVAPVGQEDLIFGD 793
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + + + K ++ + + ++ G D + +
Sbjct: 794 RGDDIIGGGDGNDTIHAGKENDLVYGGKGDDLIWGELNSDTIVGDSGNDTIYGGLNDFFK 853
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
EGRD+ F G +DL N D + L +
Sbjct: 854 TDPEGRDVLFG-----GIGNDLINGQEGDDTI-------------IGEEGNDTLRGGKEN 895
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ L + L G D + + R+ G
Sbjct: 896 DGLRGGSGNDLMLGDNGNDLLCGDEGNDTIYGDNKGVSVAVGGSGQRDCINGGEGDDLI- 954
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
Y G D +L ++ L D + +G+D + G +P
Sbjct: 955 YGNEGEDNLNGDDGNDSLAGGKDNDILSGGTGDDWLVGDSGED--TLIGGIGNDVFVLSP 1012
Query: 570 DL 571
+
Sbjct: 1013 NS 1014
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 56/416 (13%), Positives = 98/416 (23%), Gaps = 44/416 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN----------- 123
D + +D+ G TI
Sbjct: 656 GGGDGNDTIYAGKENDLVHGGKNNDLIWGDLNSDILIGDSGDDTIFGGVNDLSVSDLNPD 715
Query: 124 ------ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
+ G G YG + L S Y + +
Sbjct: 716 LLFGGSGNDYLNGNEGDDTVIGGEGKDIAYGGKGNDWIFGQLDSDTLYGGEGNDTILGDR 775
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLG-------------NNIYK--IEVQQKDSPFIQTI 222
G + G + +Y + TI
Sbjct: 776 GSNGEVAPVGQEDLIFGDRGDDIIGGGDGNDTIHAGKENDLVYGGKGDDLIWGELNSDTI 835
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
G+D + GG+ ++ + E + G N I ++++G GND + G
Sbjct: 836 VGDSGNDTI----YGGLNDFFKTDPEGRDVLFGGIGNDLINGQEGDDTIIGEEGNDTLRG 891
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N+ SGND+ G +G D IY + V ++D ++ E
Sbjct: 892 GKENDGLRGGSGNDLMLGDNGND--LLCGDEGNDTIYGDNKGVSVAVGGSGQRDCINGGE 949
Query: 343 ---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + L + L G D G D+
Sbjct: 950 GDDLIYGNEGEDNLNGDDGNDSLAGGKDNDILSGGTGDDWLVGDSGEDTLIGGIGNDV-- 1007
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
L S D F + P + +AS+ ++
Sbjct: 1008 -FVLSPNSGVDTVLNFEVGLDKFGLAGGLSFDQLQITPTLGGTVFQVASNGQVLAN 1062
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 47/329 (14%), Positives = 86/329 (26%), Gaps = 31/329 (9%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG------------ 294
I G N + ++ + G G D + G+ ++ SG
Sbjct: 585 AGGIEIISGDRGNDLLTGNSGDNWLFGDRGADTIHGDRGADILIGDSGSANPGDGAGEED 644
Query: 295 -------NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
ND+ G G DT + A ++ +N +++ + F
Sbjct: 645 LIFGEEENDIIGGGDGNDTIY--AGKENDLVHGGKNNDLIWGDLNSDILIGDSGDDTIFG 702
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
SV+ +L + + L G D + +G D F
Sbjct: 703 GVNDLSVSDLNPDLLFGGSGNDYLNGNEGDDTVIGGEGKDIAYGGKGNDWIFG----QLD 758
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF----KALEYIASHEDLINAFADAPDLV 463
D L G+D R G+ F + D I+A + +
Sbjct: 759 SDTLYGGEGNDTILGDRGSNGEVAPVGQEDLIFGDRGDDIIGGGDGNDTIHAGKENDLVY 818
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
D V + Y L + F +D + G +
Sbjct: 819 GGKGDDLIWGELNSDTIVGDSGNDTI--YGGLNDFFKTDPEGRDVLFGGIGNDLINGQEG 876
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKD 552
+ ++ L + +G D
Sbjct: 877 DDTIIGEEGNDTLRGGKENDGLRGGSGND 905
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/357 (15%), Positives = 87/357 (24%), Gaps = 28/357 (7%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G GN++ TI+ G D+L I G
Sbjct: 592 SGDRGNDLLTGNSGDNWLFGDRGADTIHGDRGADILIGDSGSANPGD---GAGEEDLIFG 648
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E+N I G GND + N++ ND+ G D S
Sbjct: 649 EEENDIIG---------GGDGNDTIYAGKENDLVHGGKNNDLIWGDLNSDILI--GDSGD 697
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
I+ N + V D N S + L + + + + I + + +
Sbjct: 698 DTIFGGVNDLSVSDLNPDLLFGGSGNDYLNGNEGDDTVIGGEGKDIAYGGKGNDWIFGQL 757
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
D + G + R G +
Sbjct: 758 DSDTLYGGEGNDTILGDRGSNGEVAPVGQEDLIFGDRGDDIIGGGDGNDTIHAGKENDLV 817
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
L + + D I + + D F EGR V F +DL
Sbjct: 818 YGGKGDDLIWGELNSDTIVGDSGNDTIYGGLNDFFKT--DPEGRDVLFGGI-----GNDL 870
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
N D G R L + ++ ++ + G D
Sbjct: 871 INGQEGDDTI----IGEEGNDTLRGGKENDGLRGGSGNDLMLGDNGNDLLCGDEGND 923
>gi|91976041|ref|YP_568700.1| RTX toxins and related Ca2+-binding proteins-like [Rhodopseudomonas
palustris BisB5]
gi|91682497|gb|ABE38799.1| RTX toxins and related Ca2+-binding proteins-like [Rhodopseudomonas
palustris BisB5]
Length = 769
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/375 (14%), Positives = 94/375 (25%), Gaps = 31/375 (8%)
Query: 200 GSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ I + TI G D + + G N I +
Sbjct: 313 TRCADTIIGNAGDDNIDGREGSDTISGGEGHDHI----VAGSGNDIVYAGAGNDIVFAGP 368
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + + + G G+D++ G N+ F +G D+ G G D + A +
Sbjct: 369 GNDVVFGGAGNDRLFGEDGDDILFGEDGNDTLFGGAGADILIGDVGDDRLYGDAGNDTLD 428
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
++ + D N+ L A + LI +G
Sbjct: 429 GGDGDDELDGGDGND-------------------RMAGGDGDDTLAGAAGNDTLIDGLGA 469
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D+ + S D R
Sbjct: 470 DIVRGGTGNDYVVAAADGAPDDYSGDAGRDTLDYSAANTRIAVDLERGTADGDEIGHDTI 529
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
F+ + + +DL G D S+ E+ L + D +
Sbjct: 530 AGFEEIIGGSGDDDLSAGADAVTIRGGSGDDLVSDGAGEDVVDAGAGDDRVLAAMDGADD 589
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF-----ADAPDLVQAGKD 552
+ Y ++ + + E I +DL+ F D AG
Sbjct: 590 RYDGGADCDTMDYSRATLRVNIDLGE-ETAEGIEIGKDLLANFERIIGGSGDDDFIAGSS 648
Query: 553 HFSNFGYEEGRSITF 567
S G E + F
Sbjct: 649 SVSFTGGEGNDTFQF 663
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 60/393 (15%), Positives = 112/393 (28%), Gaps = 50/393 (12%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ + AD G I I G H + +G VY
Sbjct: 303 GGAGDDNLLGTRCADTIIGNAGDDNIDGREGSDTISGGEGHDHIVAGSGNDIVYAGA--- 359
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK---IE 210
D F +V +++G G++I
Sbjct: 360 ------------------GNDIVFAGPGNDVVFGGAGNDRLFGED----GDDILFGEDGN 397
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ GDD L G N + + G + N +A ++
Sbjct: 398 DTLFGGAGADILIGDVGDDRL----YGDAGNDTLDGGDGDDELDGGDGNDRMAGGDGDDT 453
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDV-----------FDGSSGLDTFFYYAPSYLYKIY 319
+ G++GND +I ++ +GND + G +G DT Y A + +
Sbjct: 454 LAGAAGNDTLIDGLGADIVRGGTGNDYVVAAADGAPDDYSGDAGRDTLDYSAANTRIAVD 513
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D +E D ++ E + D + + + + G+DV
Sbjct: 514 LERGTA---DGDEIGHDTIAGFEEIIGGSGDDDLSAGADAVTIRGGSGDDLVSDGAGEDV 570
Query: 380 FESMKHFYE-FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-P 437
++ +G D +D + D R + G++ G++
Sbjct: 571 VDAGAGDDRVLAAMDGADDRYDGGADCDTMDYSRATLRVNIDLGEE--TAEGIEIGKDLL 628
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
F+ + + +D I + G D F
Sbjct: 629 ANFERIIGGSGDDDFIAGSSSVSFTGGEGNDTF 661
>gi|325201887|gb|ADY97341.1| Iron-regulated protein frpC [Neisseria meningitidis M01-240149]
Length = 1102
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 84/246 (34%), Gaps = 24/246 (9%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILS-----HNALHEIGHALGLMHPGSYNGGYPVYG 148
+ I D G G T + + ++ +A G + G
Sbjct: 752 GNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFSQDTVYNYDYATGRKDIIRFTDGITADM 811
Query: 149 VDNDYEND---------SFLTSVMSYFMPQDSMMDASFGYCATPM-VSDIVAVQKIYGAP 198
+ E + S +V SYF S V D+ V+++
Sbjct: 812 LTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKEL--VQ 869
Query: 199 KGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ + G++ Y+ +Y + GDDLL+ G N + ++ G
Sbjct: 870 QSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDAGNDSIYSGNGNDTLDG 925
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N + + +++ G GND + G N+ +GND +G SG DT+ +
Sbjct: 926 GEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYIFGKGFGQ 985
Query: 316 YKIYRF 321
+Y +
Sbjct: 986 DTVYNY 991
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 80/288 (27%), Gaps = 60/288 (20%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 743 GHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFSQDTVYNYDYATGRKDIIR 802
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV- 354
+ V ++ ++ + F + + V
Sbjct: 803 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 862
Query: 355 --------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L S L +G D G D +Y G
Sbjct: 863 TVKELVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLNGDAGND-----SIYSG 917
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ +D + + Y +G + L ++ LI + G
Sbjct: 918 NGNDTLDGGEGNDAL----YGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 973
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
D + FG G+ ++ ++ D AA H+I G
Sbjct: 974 SDTYI-FGKGFGQDTVYN--YHVDKNSDTM--HFKGFKAADVHFIRSG 1016
>gi|46203002|ref|ZP_00208751.1| COG1216: Predicted glycosyltransferases [Magnetospirillum
magnetotacticum MS-1]
Length = 800
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/257 (19%), Positives = 78/257 (30%), Gaps = 66/257 (25%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIAS------- 448
FD+ YL +Y D+ G HY+ HG EGR+P A F L YI
Sbjct: 22 PFFDAAFYLSAYPDVAAGGGD----PLLHYLDHGWLEGRDPSAVFSTLYYIDRHLADRAP 77
Query: 449 -HEDLINAFADAPDLVQVGKDHFSNF--GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ L A + ++V ++F E FD+ Y R
Sbjct: 78 ANPLLHYAGLTPAERLRVATQPGADFPALQAEVAAPFFDAPYYA------RRAGLGSGED 131
Query: 506 AARHYITHGVKEGRNPDA-FKALEYIASHEDLIN-------------------------- 538
HY+T G + G +P+ F Y+ H +
Sbjct: 132 PLAHYLTKGWRRGLDPNDAFAGDTYLQRHAHMRRLGVSPLYHFAATRRLQGAEAATAPAR 191
Query: 539 -------AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA 591
A P + E + F+ + YL + D+
Sbjct: 192 RAKPPVVALPADPAEATDAQ-------IYEAVAAEFDREHYLETNADIRR----SGIDPV 240
Query: 592 QHYITHGMKEGRALGIS 608
+H++ G +E R S
Sbjct: 241 RHFLDFGAREDRDPSPS 257
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 52/304 (17%), Positives = 85/304 (27%), Gaps = 74/304 (24%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
Y ++Y D+ G + H+ + G EGRD + F + Y+ ++
Sbjct: 23 FFDAAFYLSAYPDVAAGGGDPLL----HYLDHGWLEGRDPSAVFSTLYYIDR-----HLA 73
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD--------LVQVGK 467
HY E ++ A ++ F DAP +
Sbjct: 74 DRAPANPLLHYAGLTPAERLRVATQPGADFPALQAEVAAPFFDAPYYARRAGLGSGEDPL 133
Query: 468 DHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN----- 520
H+ G G F YL + +R + + H+ +G
Sbjct: 134 AHYLTKGWRRGLDPNDAFAGDTYLQRHAHMRRLG----VSPLYHFAATRRLQGAEAATAP 189
Query: 521 ---------------------------PDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
F Y+ ++ D+ + P H
Sbjct: 190 ARRAKPPVVALPADPAEATDAQIYEAVAAEFDREHYLETNADIRRS-GIDP------VRH 242
Query: 554 FSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
F +FG E R S +F+ Y Y G+ HY+ GRALG
Sbjct: 243 FLDFGAREDRDPSPSFSVRYYRKQY---RREIGAG-INPFVHYL----AVGRALGFRPTP 294
Query: 612 FKSV 615
F
Sbjct: 295 FGLG 298
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 48/161 (29%), Gaps = 29/161 (18%)
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHE 534
FD+ YL +Y D+ G HY+ HG EGR+P A F L YI H
Sbjct: 17 AATAAPFFDAAFYLSAYPDVAAGGGD----PLLHYLDHGWLEGRDPSAVFSTLYYIDRH- 71
Query: 535 DLINAFADAPDLVQAGKDHFSN------------FGYEEGRSITFNPDLYLTSYDDLWNV 582
L + P L AG E + F+ Y
Sbjct: 72 -LADRAPANPLLHYAGLTPAERLRVATQPGADFPALQAEVAAPFFDAPYYA------RRA 124
Query: 583 FGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
HY+T G + G + + ++
Sbjct: 125 GLGSGEDPLAHYLTKGWRRG----LDPNDAFAGDTYLQRHA 161
>gi|186659959|gb|ACC85900.1| hypothetical protein 1 [Beta vulgaris subsp. vulgaris]
Length = 123
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 11/123 (8%)
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISSNNG--------YVCTPRYDSRYFMEINF--DKA 107
++ W V ++TF E + D N + P + Y + + +
Sbjct: 1 SMQSWXDVANVTFTEKASGGDGHMTFGNYSIXXDGAAXFAYLPGTGAGYDGTSWYLTNNS 60
Query: 108 DVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY-PVYGVDNDYENDSFLTSVMSYF 166
HEIGH LGL HPG YN G D Y D+ S+MSY+
Sbjct: 61 YTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGNGNPTYNDATYGQDTRGYSLMSYW 120
Query: 167 MPQ 169
Sbjct: 121 SES 123
>gi|325129777|gb|EGC52586.1| Iron-regulated protein frpA [Neisseria meningitidis OX99.30304]
Length = 669
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/258 (15%), Positives = 78/258 (30%), Gaps = 11/258 (4%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 305 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 364
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 365 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 424
Query: 188 --IVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y +Y + G+DLL+ G N
Sbjct: 425 VLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLN----GDAGNDS 480
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 481 IYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 540
Query: 304 LDTFFYYAPSYLYKIYRF 321
DT+ + +Y +
Sbjct: 541 SDTYVFGEGFGQDTVYNY 558
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 76/288 (26%), Gaps = 60/288 (20%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 310 GHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 369
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV- 354
+ V ++ ++ + F + + V
Sbjct: 370 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 429
Query: 355 --------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L S L +G D G D +Y G
Sbjct: 430 TVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLNGDAGND-----SIYSG 484
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ +D N + Y +G + L ++ LI + G
Sbjct: 485 NGNDTLNGGEGNDAL----YGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 540
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
D + EG ++ D AA H+I G
Sbjct: 541 SDTYVFG---EGFGQDTVYNYHVDKNSDTM--HFKGFKAADVHFIRSG 583
>gi|158520629|ref|YP_001528499.1| hemolysin-type calcium-binding region [Desulfococcus oleovorans Hxd3]
gi|158509455|gb|ABW66422.1| Hemolysin-type calcium-binding region [Desulfococcus oleovorans Hxd3]
Length = 12741
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 64/471 (13%), Positives = 122/471 (25%), Gaps = 53/471 (11%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ S F +N + + I + +V G G T
Sbjct: 1164 VAPVSTAHFTGISNAA-----GGAGADLLIGNSQDNVLDGGGGGDTYRFAAG-------- 1210
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G +D S ++ + D + D +
Sbjct: 1211 ---------WGSDKIVDYGTDGSDVLDFSAVASNLAVTVHADGTVSVTDGASTLDNADII 1261
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ G G+N + E Q + FI +G + LD +
Sbjct: 1262 E---GIVGGSGSNTFAFEDQADFAGFID--GGTGTGNTLDYSAYTTGVTV-----GLADV 1311
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ I+++ G SG+D + G+ N GND G G DT A
Sbjct: 1312 TATGTTGVD-----NIQNITGGSGDDTLTGDDQANTITGGDGNDTITGGGGADTLSGGAG 1366
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
Y + + + +A D L +++ T+ ++
Sbjct: 1367 DDTYVMTNDGATVTITEAAAAGTDTL------DYSEWGAPVTVNLSTGTAPGTSGVNNIE 1420
Query: 373 QVIGQ---DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
Q IG D F +G + D L F + A +
Sbjct: 1421 QAIGTRFADTLAGTTGDDTFVFHDGWGTDTVTDPTATDSDTL--DFSAVTAALTFTFTGT 1478
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS---- 485
G + + + G ++ G + + F +
Sbjct: 1479 GAVSVSDGTSALNNVANIENLTGGKGDDHFVFADNWGNYTITSAGDVDNDTLDFSAVTAN 1538
Query: 486 -YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
+ S + G++ A+ G N F+ ++ ++ D
Sbjct: 1539 LTFTIHSDGTVSVTDGTNTLGASGGIDNIVGGSGTNTFVFEDQGFLNAYID 1589
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 58/438 (13%), Positives = 93/438 (21%), Gaps = 81/438 (18%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + T AD G G T + N
Sbjct: 1328 GSGDDTLTGDDQ--ANTITGGDGNDTITGGGGADTLSGGAGDDTYVMTN----------- 1374
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G D+ S + ++ ++ T V++I
Sbjct: 1375 ------DGATVTITEAAAAGTDTLDY---SEWGAPVTVNLSTGTAPGTSGVNNIEQAIGT 1425
Query: 195 YGAPK--GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
A G+ G++ + D LD + + + T + S
Sbjct: 1426 RFADTLAGTTGDDTFVFHDGWGTDTVTDPTATDS--DTLDFSAVTAALTFTFTGTGAVSV 1483
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGND---------------------------------- 278
G + IE++ G G+D
Sbjct: 1484 SDGTS---ALNNVANIENLTGGKGDDHFVFADNWGNYTITSAGDVDNDTLDFSAVTANLT 1540
Query: 279 -------VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
V N S G D G SG +TF + +L + D +
Sbjct: 1541 FTIHSDGTVSVTDGTNTLGASGGIDNIVGGSGTNTFVFEDQGFLNAYIDGGTGTAILDYS 1600
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
DV + D + S L + D G
Sbjct: 1601 ACTTAIAVDVSNM---DVTVTRTVDGAAVTTTLIGSASGLKGINRIDAV--------IGG 1649
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+ D N G R+ G + I +
Sbjct: 1650 TSAGDTLTGFEEDTAWTLSGENAGSVAGGTTLRNITFSGFENLAGHADHDDTFTIQAAGS 1709
Query: 452 LINAFADAPDLVQVGKDH 469
L A P G D
Sbjct: 1710 LDGALIGHPYGPATGTDT 1727
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 55/480 (11%), Positives = 113/480 (23%), Gaps = 51/480 (10%)
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T +S I G H G + D+ V+ Y + +
Sbjct: 12005 TEISTGGDDVITTGDGDKHIFGGFGIDTITAGAGDHVVM-GDNGVVEYDTDGAPRVLETT 12063
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGN-NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
P + LG I + + I G
Sbjct: 12064 DTADHPEYGGDDTITITGDGNNHILGGMGSDTIGTEATTAGTTDVILGDNGRVTYAGDTG 12123
Query: 237 GGVKNYI---DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA-------- 285
+ I +++T I + + I I+++ +G+ VV+G++
Sbjct: 12124 ALELSEIVSTEISTGGDDVITTGDGDKHIFGGFGIDTITAGAGDHVVMGDNGVVAYDTDG 12183
Query: 286 ------------------NNVFF-ESSGNDVFDGSSGLDTFFYYAPSYLYK-IYRFENAI 325
++ GN+ G G DT A + + +N
Sbjct: 12184 TPRVLETTDTTDHPEYGGDDTITITGDGNNHILGGMGSDTIGTEATTAGTTDVILGDNGR 12243
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ YD + V + + + + G V
Sbjct: 12244 VTYDGPVGGLELSEIVSTEISTGGDDEITTGDGDKHIFGGYGVDTITAGAGDHVVMGDNG 12303
Query: 386 ---FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ G + + T + DD+ ++ G + + G+
Sbjct: 12304 VVEYDTDGAPKVLETTDTADHPEYGGDDVIDITGDG-----DNIVFGGMGSDHITTRNGT 12358
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ A + + G + + + + D G+
Sbjct: 12359 DVIFGDNGRTTYAGPVGGLHLDRLESLLPTSGGPDTIATGNGTKYIIAGFGDDTAETGTG 12418
Query: 503 RGAAARH-----YITHGVKE-----GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
Y T+G+ + L + I AG+D
Sbjct: 12419 DDILIGDNGVVLYDTNGLPALVYGTNPDVGGDDLLRTVDGTNIFIGGDGSDTMHGGAGRD 12478
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 38/299 (12%), Positives = 72/299 (24%), Gaps = 40/299 (13%)
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T +S I G H G + D+ V+ Y + +
Sbjct: 11621 TEISTGGDDVITTGDGDKHIFGGFGIDTITAGAGDHVVM-GDNGVVEYDTDGAPRVLETT 11679
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGN-NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
P + LG I + + I G D +
Sbjct: 11680 DTADHPEYGGDDTITITGDGNNHILGGMGSDTIGTEATTAGTTDVILGDNGRVTYDGPVG 11739
Query: 237 GGVKNYIDLNT---ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA-------- 285
G + I+ I + + I I+++ +G+ VV+G++
Sbjct: 11740 GLELSGIESTEISTGGDDQITTGDGDKHIFGGFGIDTITAGAGDHVVMGDNGVVAYDTDG 11799
Query: 286 ------------------NNVFF-ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++ GN+ G G DT A + +
Sbjct: 11800 TPRVLETTDTTDHPEYGGDDTITITGDGNNHILGGMGSDTIGTEATTAGTTDVILGDNGR 11859
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
V LS +E + ++ + + G D +
Sbjct: 11860 VTYDGPVGGLELSGIESTEISTG--------GDDVITTGDGDKHIFGGFGIDTITAGAG 11910
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 54/473 (11%), Positives = 104/473 (21%), Gaps = 41/473 (8%)
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
S +I G H G + D+ V+ Y ++ +
Sbjct: 11239 TSTGGDDQITTGDGDKHIFGGYGVDTITAGAGDHVVM-GDNGVVEYDTDGAPLVLETTDT 11297
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGN-NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
P + LG I + + I G
Sbjct: 11298 ADHPEYGGDDTITITGDGNNHILGGMGSDTIGTEATTAGTTDVILGDNGRVTYTGATGAL 11357
Query: 239 VKNYIDLNT---ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA---------- 285
+ I+ I + + I ++++ +G+ VV+G++
Sbjct: 11358 EPSEIESTEISTGGDDQITTGDGDKHIFGGYGVDTITAGAGDHVVMGDNGVVEYDIDGAP 11417
Query: 286 ----------------NNVFF-ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++ G++ G G DT A + + V
Sbjct: 11418 LILETTDTADHPEYGGDDTITITGDGSNHILGGMGSDTIGTEATTAGTTDVVLGDNGRVT 11477
Query: 329 DANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH-- 385
LS +E + + + + G V
Sbjct: 11478 YDGPVGGLELSGIESTEISTGGDDVITTGDGDKHIFGGYGVDTITAGAGDHVVMGDNGVV 11537
Query: 386 -FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ G + T + DD + G + + +
Sbjct: 11538 SYDTDGAPMVLETTDTADHPEYGGDDTITITGDGSNHILGGMGSDTIGTEATTAGTTDVI 11597
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD-- 502
+ + +L + S G + D +++ G D D
Sbjct: 11598 LGDNGRVTYDGPVGGLELSGIESTEISTGGDDVITTGDGDKHIFGGFGIDTITAGAGDHV 11657
Query: 503 --RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKD 552
Y T G EY I + L G D
Sbjct: 11658 VMGDNGVVEYDTDGAPRVLETTDTADHPEYGGDDTITITGDGNNHILGGMGSD 11710
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 80/257 (31%), Gaps = 15/257 (5%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT-IAQHTVIESVVGSSGNDVVIG 282
GG LD + +DL + + + G N + I + + G + + G
Sbjct: 513 GEGGSTTLDYSAYTSAVA-VDLTAGTATGVTGGISNFSNIVGGAGNDILTGDEYANEITG 571
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
S +++ G+D G G D F + I + D + D E
Sbjct: 572 GSGSDIIDGGIGDDTLTGGIGNDVFRFSDDWGFDAITDGDVGANTLDFSNATADL----E 627
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRDITFD 400
+ AD + + S+LE S + G D VFE+ F T D
Sbjct: 628 VIFAADGTLSVDDY--TSLLETGGSVAAITTGTGDDNFVFENAAAFDGTITGGTGTNTLD 685
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
Y +R G+ GV EG D L Y+ S + + A
Sbjct: 686 FSAYQTP---VRIDLGAGTVDMGGFVNDAGVMEGMTADM--PLAYLNSGDGVGVAGITDE 740
Query: 461 DLVQVGKDHFSNFGCEE 477
L+ D E
Sbjct: 741 TLLADLNDSAGVGLTVE 757
Score = 45.5 bits (106), Expect = 0.026, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 68/245 (27%), Gaps = 27/245 (11%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
P Y ++I D ++ G+G I + N I + G
Sbjct: 12317 ETTDTADHPEYGGDDVIDITGDGDNIVFGGMGSDHITTRNGTDVIF----------GDNG 12366
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
Y + L S++ D++ + D A G
Sbjct: 12367 RTTYAGPVGGLHLDRLESLLPTSGGPDTIATGNGTKYIIAGFGDDTAETGT-GDDILIGD 12425
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
N + + + T D GGDDLL I + + ++ G +
Sbjct: 12426 NGVVLYDTNGLPALVYGTNPDVGGDDLL----RTVDGTNIFIGGDGSDTMHGGAGRDAMF 12481
Query: 264 QHTVIESVVGSS------------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ + GND + G +V +GN+ F G+ D
Sbjct: 12482 GDGGKATLEEGAWRVLETIDPFIGGNDFIDGGPGRDVMMGGAGNNTFVGNLADDVMIDRY 12541
Query: 312 PSYLY 316
+
Sbjct: 12542 GRATF 12546
Score = 44.4 bits (103), Expect = 0.071, Method: Composition-based stats.
Identities = 51/471 (10%), Positives = 98/471 (20%), Gaps = 81/471 (17%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ E S D + D G G TI +
Sbjct: 11488 SGIESTEISTGGDDVITTG--------------------DGDKHIFGGYGVDTITAGAGD 11527
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
H + G + Y +
Sbjct: 11528 HVV--------MGDNGVVSYDTDGAPMVLETTDTADHPEYGGDDTITITGD--------- 11570
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
G+ G I + + I G D + G + I+
Sbjct: 11571 ----------GSNHILGGMGSDTIGTEATTAGTTDVILGDNGRVTYDGPVGGLELSGIES 11620
Query: 246 NT---ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS------------------ 284
I + + I I+++ +G+ VV+G++
Sbjct: 11621 TEISTGGDDVITTGDGDKHIFGGFGIDTITAGAGDHVVMGDNGVVEYDTDGAPRVLETTD 11680
Query: 285 --------ANNVFF-ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
++ GN+ G G DT A + + V
Sbjct: 11681 TADHPEYGGDDTITITGDGNNHILGGMGSDTIGTEATTAGTTDVILGDNGRVTYDGPVGG 11740
Query: 336 DFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH---FYEFGL 391
LS +E + + + + G V + G
Sbjct: 11741 LELSGIESTEISTGGDDQITTGDGDKHIFGGFGIDTITAGAGDHVVMGDNGVVAYDTDGT 11800
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+ T + DD + G + + + +
Sbjct: 11801 PRVLETTDTTDHPEYGGDDTITITGDGNNHILGGMGSDTIGTEATTAGTTDVILGDNGRV 11860
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ +L + S G + D +++ G D D
Sbjct: 11861 TYDGPVGGLELSGIESTEISTGGDDVITTGDGDKHIFGGFGIDTITAGAGD 11911
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 35/357 (9%), Positives = 76/357 (21%), Gaps = 28/357 (7%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E S D + + + V G + +
Sbjct: 12133 TEISTGGDDVITTGDGDKHIFGGFGIDTITA--GAGDHVVMGDNGVVAYDTDGTPRVLET 12190
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
HP D + + S + + D
Sbjct: 12191 TDTTDHPEYGGDDTITITGDGNNHILGGMGSDTIGTEATTAGTTDVILGDNGRVTYDGP- 12249
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDL 245
+ + + + I+ G D + D ++G
Sbjct: 12250 -VGGLELSEIVSTEISTGGDDEITTGDGDKHIFGGYGVDTITAGAGDHVVMGDNGVVEYD 12308
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + + + G+++V G ++ +G DV G +G
Sbjct: 12309 TDGAPKVLETTDTADHPEYGGDDVIDITGDGDNIVFGGMGSDHITTRNGTDVIFGDNGRT 12368
Query: 306 TF--------------FYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQC 350
T+ I + + + + L +
Sbjct: 12369 TYAGPVGGLHLDRLESLLPTSGGPDTIATGNGTKYIIAGFGDDTAETGTGDDILIGDNGV 12428
Query: 351 IDSVNVKQRSILEYT----ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ +++ T + L V G ++F GRD F
Sbjct: 12429 VLYDTNGLPALVYGTNPDVGGDDLLRTVDGTNIFIGGDGSDTMHGGAGRDAMFGDGG 12485
Score = 42.9 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 45/437 (10%), Positives = 93/437 (21%), Gaps = 23/437 (5%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E S D + + + Y V G A +
Sbjct: 11365 TEISTGGDDQITTGDGDKHIFGGYGVDTITA--GAGDHVVMGDNGVVEYDIDGAPLILET 11422
Query: 131 ALGLMHP-GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
HP + + G +++ + + D G V
Sbjct: 11423 TDTADHPEYGGDDTITITGDGSNHILGGMGSDTIGTEATTAGTTDVVLGDNGRVTYDGPV 11482
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
++ G + + + I+ G D + G + + +
Sbjct: 11483 GGLELSGIESTEIST---GGDDVITTGDGDKHIFGGYGVDTITA---GAGDHVVMGDNGV 11536
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S + T G + G++ G G DT
Sbjct: 11537 VSYDTDGAPMVLETTDTADHPEYGGDDTITIT----------GDGSNHILGGMGSDTIGT 11586
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASY 368
A + + V LS +E + +
Sbjct: 11587 EATTAGTTDVILGDNGRVTYDGPVGGLELSGIESTEISTGGDDVITTGDGDKHIFGGFGI 11646
Query: 369 EDLIQVIGQDVFESMKH---FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ + G V + G + T + DD + G
Sbjct: 11647 DTITAGAGDHVVMGDNGVVEYDTDGAPRVLETTDTADHPEYGGDDTITITGDGNNHILGG 11706
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ + + + + +L + S G ++ D
Sbjct: 11707 MGSDTIGTEATTAGTTDVILGDNGRVTYDGPVGGLELSGIESTEISTGGDDQITTGDGDK 11766
Query: 486 YLYLGSYDDLRNVFGSD 502
+++ G D D
Sbjct: 11767 HIFGGFGIDTITAGAGD 11783
Score = 42.5 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 37/319 (11%), Positives = 69/319 (21%), Gaps = 33/319 (10%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E S D + + + Y V G + A +
Sbjct: 12261 TEISTGGDDEITTGDGDKHIFGGYGVDTITA--GAGDHVVMGDNGVVEYDTDGAPKVLET 12318
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
HP D D + S ++ G +
Sbjct: 12319 TDTADHPEYGGDDVIDITGDGDNIVFGGMGSDHITTRNGTDVIFGDNGRTTYAGPVGGLH 12378
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ ++ S + I GDD + G + I +
Sbjct: 12379 LDRLESLLPTS------GGPDTIATGNGTKYIIAGFGDDTAE----TGTGDDILIGDNGV 12428
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ + T + G+D++ N+F G+D G +G D F
Sbjct: 12429 -VLYDTNGLPALVYGTNPDV----GGDDLLRTVDGTNIFIGGDGSDTMHGGAGRDAMFGD 12483
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + F R ++ A
Sbjct: 12484 GGKATLEEGAWRVLETIDP----------------FIGGNDFIDGGPGRDVMMGGAGNNT 12527
Query: 371 LIQVIGQDVFESMKHFYEF 389
+ + DV F
Sbjct: 12528 FVGNLADDVMIDRYGRATF 12546
Score = 41.3 bits (95), Expect = 0.59, Method: Composition-based stats.
Identities = 37/250 (14%), Positives = 69/250 (27%), Gaps = 16/250 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
S ++T +G ++ + T + ++ D N S + + G N +
Sbjct: 318 NATTGYSHLLETFVSTGDNETFEGTGANDIFSFDD-NWGSDTIVNGGGSNTVNFSAVSAD 376
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY----------YAPSYLYKIY 319
+ + V NV + G SG + F + A +
Sbjct: 377 LIFTFHADGTVSATDGENVLNPAEGISTIIAGSGDNRFVFERGAVFSGTINAAAGATNTL 436
Query: 320 RFENAIIVYDANEHKQDFLSDVER-LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
F V D + + ++ SV+ +IL TAS + +I G +
Sbjct: 437 DFSGVAPVIDPVDEDAPDRTGLDLVFTVHAGGAVSVSADGSAILGSTASMDAIIGGGGDN 496
Query: 379 ---VFESMKHFYEFGLSEGRDITFDSYLYL-GSYDDLRNVFGSDRGAAARHYITHGVKEG 434
+ EG T D Y DL + ++ G
Sbjct: 497 RFAFADGAAFAGSIDGGEGGSTTLDYSAYTSAVAVDLTAGTATGVTGGISNFSNIVGGAG 556
Query: 435 RNPDAFKALE 444
+
Sbjct: 557 NDILTGDEYA 566
Score = 40.9 bits (94), Expect = 0.62, Method: Composition-based stats.
Identities = 36/306 (11%), Positives = 73/306 (23%), Gaps = 26/306 (8%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ G V + + G G + E L L G
Sbjct: 10734 TTGLTGTVDIGLDTRVNGINYYGVETLNIDLGAGNDRFNIKGTVPESRLNLTLG-AGDDT 10792
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
D M+ + + + G+ G
Sbjct: 10793 VNVYDDARSLDAIQAEVNIDFMAGTNTLNVDGSGDTAPDDS--------IIITNGSITGL 10844
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK-----NYIDLNTESWSSI--- 253
+I + + TI+ G D + + ++ N + S
Sbjct: 10845 APGDI-NYQSTGGNMAGGITIWSGTGGDTIAVDSTHRTDGVRTITTLNTNEGNDSVTVLL 10903
Query: 254 -GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + ++V GS+ + + V F G D G SG D F
Sbjct: 10904 DADTDGFFVVNAQAGDDTVDGSASSRSL-------VIFGGDGADEIYGGSGDDIVFGDQG 10956
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
Y+ E + + + + F+ + + + + E
Sbjct: 10957 RVYYRNETGEVVTSLGNGTPIAGNTVEVTSTWDFSANTDPLTSSRVIRLDGGAENGETWS 11016
Query: 373 QVIGQD 378
I ++
Sbjct: 11017 VGIKEN 11022
Score = 40.9 bits (94), Expect = 0.71, Method: Composition-based stats.
Identities = 27/303 (8%), Positives = 62/303 (20%), Gaps = 17/303 (5%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +TI+ G D + G +++ + M +
Sbjct: 11110 DPGIGGMDTIDAGDGNETIFGGFGADTIT----AGAGDHVVMGDNGVVEYDTDGAPMVLE 11165
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + I NN G+D + + +N
Sbjct: 11166 TTDTAGHPEYGGDDTITITGDGNNHILGGMGSDTIG--------TEATTAGTTDVILGDN 11217
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ Y + + V + + + G V
Sbjct: 11218 GRVTYAGDTGALELSEIVSAETSTGGDDQITTGDGDKHIFGGYGVDTITAGAGDHVVMGD 11277
Query: 384 KH---FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ G + T + DD + G + +
Sbjct: 11278 NGVVEYDTDGAPLVLETTDTADHPEYGGDDTITITGDGNNHILGGMGSDTIGTEATTAGT 11337
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD-DLRNVF 499
+ + + + A + + G ++ G Y D
Sbjct: 11338 TDVI-LGDNGRVTYTGATGALEPSEIESTEISTGGDDQITTGDGDKHIFGGYGVDTITAG 11396
Query: 500 GSD 502
D
Sbjct: 11397 AGD 11399
>gi|300864203|ref|ZP_07109087.1| hypothetical protein OSCI_740004 [Oscillatoria sp. PCC 6506]
gi|300337777|emb|CBN54233.1| hypothetical protein OSCI_740004 [Oscillatoria sp. PCC 6506]
Length = 541
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 76/208 (36%), Gaps = 22/208 (10%)
Query: 203 GNNIYKIEV---QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G++ TI GG+D+L +G N + ++ ++ G + N
Sbjct: 51 GDDWVTNNEESRTYYGMAGNDTIIGLGGNDIL----LGNAGNDLLCGNQASDTLSGGQNN 106
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ + + G GND+++G+ +++ +GND G G D F + I
Sbjct: 107 DTLIGGKASDILNGDIGNDILLGDLGDDILTGGAGNDTLTGGDGSDIFVIAKSEGIDLIT 166
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE--DLIQVIGQ 377
FEN + N L F D I + N Q + + A+ + +
Sbjct: 167 DFENGVDFIQLNPS----------LTFNDLAITTTNSGQVLVTDKIANQSLFVISGIAAS 216
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYL 405
D+ + + G SEG F +
Sbjct: 217 DLTAAD---FITGTSEGTPDPFGERSFT 241
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 78/272 (28%), Gaps = 35/272 (12%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D+ + + + N+ I + + + + G +GND +IG N
Sbjct: 20 GNDIFFFNQLPANQISLLSNSPGRDIIMLLGGDDWVTNNEESRTYYGMAGNDTIIGLGGN 79
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
++ ++GND+ G+ DT + D L
Sbjct: 80 DILLGNAGNDLLCGNQASDTL----SGGQNNDTLIGGKASDILNGDIGNDIL-------- 127
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ IL A + L G D+ + SEG D+ D +
Sbjct: 128 -------LGDLGDDILTGGAGNDTLTGGDGSDI-------FVIAKSEGIDLITDFENGVD 173
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV- 465
++ +D + V + + + IA+ + F
Sbjct: 174 FIQLNPSLTFNDLAITTTNSGQVLVTDKIANQSLFVISGIAASDLTAADFITGTSEGTPD 233
Query: 466 --------GKDHFSNFGCEEGRFVTFDSYLYL 489
+ F + E G + D+ Y
Sbjct: 234 PFGERSFTKYEAFLSPQQEPGEAIVSDAKGYG 265
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 58/239 (24%), Gaps = 12/239 (5%)
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER---LR 345
+D+ + G D FF+ + D++++ E
Sbjct: 6 IDLGMPSDIAQATEGNDIFFFNQLPANQISLLSNSPGRDIIMLLGGDDWVTNNEESRTYY 65
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ + IL A + L D ++ + DI
Sbjct: 66 GMAGNDTIIGLGGNDILLGNAGNDLLCGNQASDTLSGGQNNDTLIGGKASDILNGDIG-- 123
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
D L G D T +G + E I D N +
Sbjct: 124 --NDILLGDLGDDILTGGAGNDTLTGGDGSDIFVIAKSEGIDLITDFENGVDFIQLNPSL 181
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
+ + G+ + D + L + G G EG PD F
Sbjct: 182 TFNDLAITTTNSGQVLVTDKI----ANQSLFVISGIAASDLTAADFITGTSEG-TPDPF 235
>gi|46241610|gb|AAS82995.1| putative calcium-binding protein-like protein [Azospirillum
brasilense]
Length = 953
Score = 79.4 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 74/493 (15%), Positives = 135/493 (27%), Gaps = 57/493 (11%)
Query: 91 TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD 150
+P + G + G + G +
Sbjct: 144 SPFAGVEGAGARGWAHELAVTGTPTDGNDTLTSDDAADNINGGAGNDILIGNGGNDTLIG 203
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN---NIY 207
+ + F D ++ + MV DI G P S G+ + +
Sbjct: 204 GVGHDTMDGGAGADVFDGGDGFDVVTYENATSGMVIDI-------GNPANSTGDAAGDSF 256
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ S + T+ G+D + G I ++ + N T+
Sbjct: 257 TGIERWIGSNYADTMV--AGNDPVWFWGHAGDDVEI--GGAGNDTMESGDGNDTVYGGDG 312
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + + NDV+ G + N++ + GND+ DG +G DT F +
Sbjct: 313 DDQIYSRADNDVLYGEAGNDLIYGGWGNDMLDGGAGNDTLFGEGDADT------------ 360
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ D + ++ A + LI +G D E
Sbjct: 361 ----------------INGGDGDDSLDGGQGNDLMNGGAGNDTLIGGLGHDTMEGGAGAD 404
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRN------VFGSDRGAAARHYITHGVKEGRNPDAFK 441
F +G D + G DLRN D +I + +
Sbjct: 405 VFDGGDGFDEVTYANATAGVVLDLRNPANSTGDAAGDTFTNIERWIGSEFDDRLVGNDDG 464
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVF 499
+ D+ A + + G + R D LY + +DL
Sbjct: 465 VWFWGHGGNDVEIGGAGNDTMESGIGNDTIYGGGGDDRAFGRADDDMLYGEAGNDLLAGG 524
Query: 500 GS----DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G D G I + + Y +H+ L A AG D F
Sbjct: 525 GGNDMLDGGTGNDTLIGDWGVDTMIGGDGDDVFYSGAHDPLPEA---DIIQGGAGNDTFI 581
Query: 556 NFGYEEGRSITFN 568
+ +++++
Sbjct: 582 IAAQSDAGTVSYD 594
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/273 (14%), Positives = 71/273 (26%), Gaps = 3/273 (1%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ + T G + T+ ++ + I + ++G+
Sbjct: 137 TAPVFTPSPFAGVEGAGARGWAHELAVTGTPTDGNDTLTSDDAADNINGGAGNDILIGNG 196
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND +IG ++ +G DVFDG G D Y + I A +
Sbjct: 197 GNDTLIGGVGHDTMDGGAGADVFDGGDGFDVVTYENATSGMVIDIGNPANS---TGDAAG 253
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D + +ER ++ V A + I G D ES +G
Sbjct: 254 DSFTGIERWIGSNYADTMVAGNDPVWFWGHAGDDVEIGGAGNDTMESGDGNDTVYGGDGD 313
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
D + Y + N G + + L
Sbjct: 314 DQIYSRADNDVLYGEAGNDLIYGGWGNDMLDGGAGNDTLFGEGDADTINGGDGDDSLDGG 373
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+ G D + + ++
Sbjct: 374 QGNDLMNGGAGNDTLIGGLGHDTMEGGAGADVF 406
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/403 (14%), Positives = 100/403 (24%), Gaps = 43/403 (10%)
Query: 68 LTFEETSIHSDIKFIS-SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+T+E + I + +N+ + I + AD G H
Sbjct: 228 VTYENATSGMVIDIGNPANSTGDAAGDSFTGIERWIGSNYADTMVAGNDPVWFWGHAGDD 287
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
G S +G VYG D D + S + + Y + ++ +G M+
Sbjct: 288 VEIGGAGNDTMESGDGNDTVYGGDGDDQIYSRADNDVLYGEAGNDLIYGGWG---NDMLD 344
Query: 187 DIVAVQKIYGAPKGSLGNNIYK-----------------IEVQQKDSPFIQTIYDSGGDD 229
++G N T+ G D
Sbjct: 345 GGAGNDTLFGEGDADTINGGDGDDSLDGGQGNDLMNGGAGNDTLIGGLGHDTMEGGAGAD 404
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH---TVIESVVGSSGNDVVIGNSAN 286
+ D Y + + + A T IE +GS +D ++GN
Sbjct: 405 VFDGGDGFDEVTYANATAGVVLDLRNPANSTGDAAGDTFTNIERWIGSEFDDRLVGNDDG 464
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
F+ GNDV G +G DT + IY + +
Sbjct: 465 VWFWGHGGNDVEIGGAGNDTM--ESGIGNDTIYGGGGDDRAFGRADD------------- 509
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+L + L G D +G D+ +
Sbjct: 510 ----DMLYGEAGNDLLAGGGGNDMLDGGTGNDTLIGDWGVDTMIGGDGDDVFYSGAHDPL 565
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
D+ + G + L + +
Sbjct: 566 PEADIIQGGAGNDTFIIAAQSDAGTVSYDGGEGTDTLRISSDN 608
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 70/505 (13%), Positives = 127/505 (25%), Gaps = 56/505 (11%)
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
+ D G+G T+ G GV D N +
Sbjct: 376 NDLMNGGAGNDTLIGGLGHDTMEGGAGADVFDGGDGFD---EVTYANATAGVVLDLRNPA 432
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
T + + + + +D +G +G +
Sbjct: 433 NSTGDAAGDTFTNIERWIGSEFDDRLVGNDDGVWFWGHGGNDVEIGG---AGNDTMESGI 489
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
TIY GGDD G + + + G N + T ++++G G
Sbjct: 490 GNDTIYGGGGDDRA----FGRADDDMLYGEAGNDLLAGGGGNDMLDGGTGNDTLIGDWGV 545
Query: 278 DVVIGNSANNVFFESSGN-----DVFDGSSGLDTFFYYAPSYLYKIY--RFENAIIVYDA 330
D +IG ++VF+ + + D+ G +G DTF A S + E + +
Sbjct: 546 DTMIGGDGDDVFYSGAHDPLPEADIIQGGAGNDTFIIAAQSDAGTVSYDGGEGTDTLRIS 605
Query: 331 NEHKQD-----------------FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+++ D L+ VERL + + AS +I
Sbjct: 606 SDNVADPENKITTATPQIDISGMALTSVERLELV-GSVRHTVTMTAAQANGFAS---IIG 661
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G DVF ++ G + + + A A +T
Sbjct: 662 ATGGDVFTVTGTAMTGAVTAGNGSQLTAGQVQAETVNGVTLLHIGTDATAGADVTLRFAG 721
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
G D F+ + + D+
Sbjct: 722 GFTADQFQVNGSGITLSGTPSTPPTTEPPTTEPPTTTPPTTEPPTTTPPVDNRPSTAMQR 781
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI---------------- 537
+ V + A ++ + L ++ L
Sbjct: 782 IVDGVTEDVKAYAYEGPVSTLQWTFLGDARSEVLGGSDGNDFLNLLGGDDAAAGGAGDDV 841
Query: 538 --NAFADAPDLVQAGKDHFSNFGYE 560
+ +GKD F G
Sbjct: 842 LDGGSGSNWLIGGSGKDTFFVDGRG 866
>gi|119486636|ref|ZP_01620686.1| hypothetical protein L8106_12835 [Lyngbya sp. PCC 8106]
gi|119456253|gb|EAW37385.1| hypothetical protein L8106_12835 [Lyngbya sp. PCC 8106]
Length = 2074
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/314 (13%), Positives = 80/314 (25%), Gaps = 11/314 (3%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
T M F D G T+ + G G
Sbjct: 1698 DGTPQSDTISGSLGSDMVFAFGGDDHIEASEGPDTVFGGDGNDLSFGEEGNDSLLGDRGS 1757
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ G + + + T + F+ + D G M+ YG
Sbjct: 1758 DTLIGSNGSQDIAATATIDENDFIYGHASNDLMQGGPGADMMYSGKQDDFAYGGQN---- 1813
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-TESWSSIGGYEKNMTI 262
+ T+Y G+D + + + + + G + +
Sbjct: 1814 ------DDMVWGDLGSDTLYGDQGNDTMIGDTADENEVEAERGLSGMIDFMWGGAGDDLM 1867
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++ G GND V G +++ + +G+D+ G G D + +
Sbjct: 1868 NGGRSNDTLSGGVGNDTVRGGKEDDLVYGEAGDDLMYGDLGNDLLCGNEGNDTIYGDIND 1927
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N I S + L + + L S + L G D
Sbjct: 1928 NETISTLPGRDTLCGGSGNDILFGNEDQDRLCGGEDSDTLYGGDSEDTLAGEQGDDWLFG 1987
Query: 383 MKHFYEFGLSEGRD 396
+ G D
Sbjct: 1988 DQGNDLISGGSGID 2001
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/351 (12%), Positives = 81/351 (23%), Gaps = 21/351 (5%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
PQ + S G ++ G G+ ++
Sbjct: 1699 GTPQSDTISGSLGSDMVFAFGGDDHIEASEGPDTVFGGD----GNDLSFGEEGNDSLLGD 1754
Query: 226 GGDDLLDLTLIGGV---KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
G D L + ID N I G+ N + + + +D G
Sbjct: 1755 RGSDTLIGSNGSQDIAATATIDEN----DFIYGHASNDLMQGGPGADMMYSGKQDDFAYG 1810
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+++ + G+D G G DT + ++ D L +
Sbjct: 1811 GQNDDMVWGDLGSDTLYGDQGNDTMIGDTADENEVEAERGLSGMIDFMWGGAGDDLMN-- 1868
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+ + + G D+ +EG D +
Sbjct: 1869 ---GGRSNDTLSGGVGNDTVRGGKEDDLVYGEAGDDLMYGDLGNDLLCGNEGNDTIYGDI 1925
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
+ L G+ + ++ Y ED + L
Sbjct: 1926 NDNETISTLPGRDTLCGGSGNDILFGNEDQDRLCGGEDSDTLYGGDSEDTLAGEQGDDWL 1985
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLY-----LGSYDDLRNVFGSDRGAAAR 508
+ + G RF+ F DL + G A
Sbjct: 1986 FGDQGNDLISGGSGIDRFILFSGSGTDTIQDFQLGTDLIALGGGLTFDALT 2036
>gi|170747645|ref|YP_001753905.1| hypothetical protein Mrad2831_1218 [Methylobacterium radiotolerans
JCM 2831]
gi|170654167|gb|ACB23222.1| hypothetical protein Mrad2831_1218 [Methylobacterium radiotolerans
JCM 2831]
Length = 518
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 18/131 (13%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLINAFA 541
FD Y Y D+R+ + A H+I HGV+EGR P+ F + YI+ + + +
Sbjct: 364 FDESFYKNEYSDVRDSGVN----ALEHFIQHGVREGRWPNEFFDTIWYISEYMN-YDNVG 418
Query: 542 DAPDLVQAGKDHFSNF--GYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
P + H+ N G + F+ YL D+ + QH++ G
Sbjct: 419 MNPLI------HYCNEWKGMNVNPNPYFSVRSYLEWNPDV----AASGEEPCQHFLRMGG 468
Query: 600 KEGRALGISGM 610
+EGR S
Sbjct: 469 REGRMTDFSTP 479
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 46/141 (32%), Gaps = 19/141 (13%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSY 408
I S + + +++HF + G+ EGR FD+ Y+ Y
Sbjct: 357 IVSQTGLFDESFYKNEYSDVRDSGV-----NALEHFIQHGVREGRWPNEFFDTIWYISEY 411
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGK 467
+ NV HY NP+ F Y+ + D+ + +
Sbjct: 412 MNYDNV----GMNPLIHYCNEWKGMNVNPNPYFSVRSYLEWNPDVAASGEEPC------- 460
Query: 468 DHFSNFGCEEGRFVTFDSYLY 488
HF G EGR F + Y
Sbjct: 461 QHFLRMGGREGRMTDFSTPFY 481
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 49/135 (36%), Gaps = 19/135 (14%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAF 456
FD Y Y D+R A H+I HGV+EGR P + F + YI+ + + N
Sbjct: 363 LFDESFYKNEYSDVR----DSGVNALEHFIQHGVREGRWPNEFFDTIWYISEYMNYDNVG 418
Query: 457 ADAPDLVQVGKDHFSNF--GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ H+ N G F YL D+ +H++ G
Sbjct: 419 MNP-------LIHYCNEWKGMNVNPNPYFSVRSYLEWNPDVAASG----EEPCQHFLRMG 467
Query: 515 VKEGRNPDAFKALEY 529
+EGR F Y
Sbjct: 468 GREGR-MTDFSTPFY 481
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 48/139 (34%), Gaps = 21/139 (15%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
F Y + D+ ++ + +HF G EGR+ FD+ Y+ Y +
Sbjct: 361 TGLFDESFYKNEYSDVRDSGVN-------ALEHFIQHGVREGRWPNEFFDTIWYISEYMN 413
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDH 553
NV + HY NP+ F Y+ + D+ + + H
Sbjct: 414 YDNVGMN----PLIHYCNEWKGMNVNPNPYFSVRSYLEWNPDVAAS-------GEEPCQH 462
Query: 554 FSNFGYEEGRSITFNPDLY 572
F G EGR F+ Y
Sbjct: 463 FLRMGGREGRMTDFSTPFY 481
>gi|240137335|ref|YP_002961804.1| hypothetical protein MexAM1_META1p0597 [Methylobacterium extorquens
AM1]
gi|240007301|gb|ACS38527.1| hypothetical protein MexAM1_META1p0597 [Methylobacterium extorquens
AM1]
Length = 294
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 40/132 (30%), Gaps = 21/132 (15%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
FD+ Y + HY G + RNP+ F Y
Sbjct: 29 FDAAYYRERNPGVARSGLD----PFLHYAWFGARRDRNPNADFDTAFYRRQSG------- 77
Query: 542 DAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
H+ G +G S F+ LYL Y D+ QH+ T G
Sbjct: 78 ---RTRLDPLRHYGQIGAAQGLDPSPGFSTSLYLARYPDVVAA----GVNPLQHFRTDGR 130
Query: 600 KEGRALGISGMQ 611
EGR S ++
Sbjct: 131 AEGREAAPSPIE 142
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 38/134 (28%), Gaps = 22/134 (16%)
Query: 394 GRDI-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHED 451
GR FD+ Y HY G + RNP+ F Y
Sbjct: 23 GRVPKLFDAAYYRERNP----GVARSGLDPFLHYAWFGARRDRNPNADFDTAFYRRQS-- 76
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
H+ G +G F + LYL Y D+ + +H
Sbjct: 77 --------GRTRLDPLRHYGQIGAAQGLDPSPGFSTSLYLARYPDVVAAGVN----PLQH 124
Query: 510 YITHGVKEGRNPDA 523
+ T G EGR
Sbjct: 125 FRTDGRAEGREAAP 138
Score = 44.8 bits (104), Expect = 0.054, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 14/98 (14%)
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYL 403
F + + N + S G+ + ++H+ + G ++G D + F + L
Sbjct: 55 FGARRDRNPNADFDTAFYRRQS--------GRTRLDPLRHYGQIGAAQGLDPSPGFSTSL 106
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
YL Y D+ +H+ T G EGR
Sbjct: 107 YLARYPDVVAA----GVNPLQHFRTDGRAEGREAAPSP 140
>gi|209528197|ref|ZP_03276666.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209491363|gb|EDZ91749.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 1313
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 83/529 (15%), Positives = 149/529 (28%), Gaps = 51/529 (9%)
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI 219
+++ + +ASF Y A+ ++ A I P + N +
Sbjct: 634 NTIVRFTPTLPGGTEASFTYTASDGNTEDSANVFIDILPVTRI--NGLGGDDVLYGGSGP 691
Query: 220 QTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+Y G+D L D TL+G + I + G N + + + G
Sbjct: 692 DLLYGGAGNDCLFGEAGDDTLLGDSGDDIVFGGSGDDILFGGPGNDQLYGGADNDILYGG 751
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D + G+ ++ F ++GND G +G D F Y + + ++ D
Sbjct: 752 QGDDFLSGDDGDDTLFGNAGNDTLFGGAGNDVFAYIS-----RSQITTGTDLILDFTPGS 806
Query: 335 QDFLSDVERLRF--ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
L D E F +++ Q+ +L T +Y+D + +I +
Sbjct: 807 DRLLFDREEFGFIQIGTTPENILSPQQLVLVETGTYQDNLSLINSPILAYELQTGNLLYD 866
Query: 393 EGRDITFDSYLY--------LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
T + L D + D ++ RN AF +
Sbjct: 867 PDGSGTQPPEIIANLQGNPPLSVNDIILIGTAGDDTLDDGDDDDPTDEDTRNITAFALIN 926
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSN-------------FGCEEGRFVTFDSYLYLGS 491
++ + V V N G +
Sbjct: 927 GTPGNDAIAANDTIDFVGVPVTIPASDNERIAVINTITDLIGGNVNILEGGTAAEFIPTL 986
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
F + + + I V N + A++ A + LI + D G
Sbjct: 987 PGGNLGSFSYEAIDSEGNLIRVPV----NVNILTAIDGNAGDDTLIGSDGDDSLFGNLGN 1042
Query: 552 DHFS-------NFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG-- 602
D G E + + + DL F G G
Sbjct: 1043 DCLIGGAGDDTLVGGEGSDTFAYLSPNQINLGVDLIVDFTPGSDRLLFDSDQFGFTRGTT 1102
Query: 603 RALGISGMQF-KSVMNLSEKSRDKADLS--LSFDHKKVDLYTDYFGDGN 648
+S QF S L+++ + +L D G G
Sbjct: 1103 PENSLSPEQFIFLETGEFNPDNLDTISSPILAYELQTGNLIYDPDGSGT 1151
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 12/161 (7%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
I+ ++I G N T+ +++ G +GND ++G S N+ G+
Sbjct: 272 FATATATINFQP--VTAIQGRGGNDTLVGDQFDQTLDGGTGNDSILGGSGNDTLLGGPGD 329
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G G D A S +Y ++ + +++ L
Sbjct: 330 DTLFGEDGND--LLQAGSDNNLLYGGKDDDTLLGGSDNDT--------LFGGLGDDLLQA 379
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+IL+ + L+ IG D + G +
Sbjct: 380 GSGDNILDGGPGNDTLLGGIGNDSLFGGEGNDCLSGGGGNN 420
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 51/186 (27%), Gaps = 23/186 (12%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ + I GG+D L + SI G N T+ +++
Sbjct: 278 TINFQPVTAIQGRGGNDTLVGDQFDQTLD----GGTGNDSILGGSGNDTLLGGPGDDTLF 333
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND++ S NN+ + +D G S DT F + + + + D
Sbjct: 334 GEDGNDLLQAGSDNNLLYGGKDDDTLLGGSDNDTLF---GGLGDDLLQAGSGDNILDGGP 390
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
L + L + L G + E
Sbjct: 391 GNDTLLGGI----------------GNDSLFGGEGNDCLSGGGGNNWLEGGAGVNTLTAG 434
Query: 393 EGRDIT 398
G D
Sbjct: 435 TGNDTL 440
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 55/179 (30%), Gaps = 27/179 (15%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G +G+ + + +I G+D L D TL G N +
Sbjct: 291 GGNDTLVGD---QFDQTLDGGTGNDSILGGSGNDTLLGGPGDDTLFGEDGNDLLQAGSDN 347
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ + G + + T+ + +++ G G+D++ S +N+ GND G G D+ F
Sbjct: 348 NLLYGGKDDDTLLGGSDNDTLFGGLGDDLLQAGSGDNILDGGPGNDTLLGGIGNDSLF-- 405
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
E + + L L Y + +
Sbjct: 406 ---------GGEGNDCLSGGGGNNW--------LEGGAGVNTLTAGTGNDTLVYLSPND 447
>gi|312883386|ref|ZP_07743112.1| Hemolysin-type calcium-binding region [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369002|gb|EFP96528.1| Hemolysin-type calcium-binding region [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 647
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/305 (16%), Positives = 87/305 (28%), Gaps = 19/305 (6%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D ++ G N I E ++ G E N + + + + G G D + G ++ +
Sbjct: 19 DDSIFGLRGNDILRGKEGTDNLSGGEGNDRLFGDSGSDFLQGDQGADYLFGGQGSDRLYG 78
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G+D G SG D + + + E +D L D
Sbjct: 79 GEGDDKLYGQSGDD--VLEGGEGIDDLKGGSGDDKLL--GEQGEDKLWG------GDGND 128
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGS 407
+ + L + LI G D + D + LY GS
Sbjct: 129 ELDGGQSDDELWGEDGDDTLIGGQGSDKLFGDDGNDVLYGGQSNDTLKGGEGNDTLYGGS 188
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
+D + G + Y G R L + L + + G+
Sbjct: 189 GNDTIDGDGVNAYGDDTLYGGEGTDTLRGNSGNDELYGGVDDDILEGNDGNDKVFGEAGR 248
Query: 468 DHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGVKEGRNPD 522
D+ ++ D D L + G+D G H+ E +
Sbjct: 249 DNIWGGQGDDELNGGQGDDQIWGGVGNDRLISGEGNDKLYGGEGDDHFFIDKNDEVYGGE 308
Query: 523 AFKAL 527
F +
Sbjct: 309 GFDTI 313
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 52/305 (17%), Positives = 85/305 (27%), Gaps = 11/305 (3%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S+I G T+ +S+ G GND++ G + GND G SG D F
Sbjct: 2 SNIYGTNDQDTLIGTNEDDSIFGLRGNDILRGKEGTDNLSGGEGNDRLFGDSGSD--FLQ 59
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ + + +Y + + S + L + D L +
Sbjct: 60 GDQGADYLFGGQGSDRLYGGEGDDKLYGQSGDDVLEGGEGIDDLKGGSGDDKLLGEQGED 119
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G D + + E +G D + D N +
Sbjct: 120 KLWGGDGNDELDGGQSDDELWGEDGDDTLIGGQGSDKLFGDDGNDVLYGGQSNDTLKGGE 179
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G + D +NA+ D G D + + D L
Sbjct: 180 GNDTLYGGSGNDTI-----DGDGVNAYGDDTLYGGEGTDTLRGNSGNDELYGGVDDD-IL 233
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D VFG + G E + ++ LI+ +
Sbjct: 234 EGNDGNDKVFGEAGRDNI--WGGQGDDELNGGQGDDQIWGGVGNDRLISGEGNDKLYGGE 291
Query: 550 GKDHF 554
G DHF
Sbjct: 292 GDDHF 296
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 80/292 (27%), Gaps = 25/292 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S F+ + G + D G + + ++ G
Sbjct: 51 GDSGSDFLQGDQGADYL-FGGQGSDRLYGGEGDDKLYGQSGDDVLEGGEGIDDLKGGSGD 109
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G ++G D + E D + + D G + + +
Sbjct: 110 DKLLGEQGEDKLWGGDGNDELDGGQSDDELWGED---GDDTLIGGQGSDKLFGDDGNDVL 166
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG K T+Y G+D +D + + E ++
Sbjct: 167 YGGQS----------NDTLKGGEGNDTLYGGSGNDTIDGDGVNAYGDDTLYGGEGTDTLR 216
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + + G+ GND V G + + + G+D +G G D +
Sbjct: 217 GNSGNDELYGGVDDDILEGNDGNDKVFGEAGRDNIWGGQGDDELNGGQGDDQI--WGGVG 274
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
++ E +Y F D+ + + + ++
Sbjct: 275 NDRLISGEGNDKLYGGEGDDH---------FFIDKNDEVYGGEGFDTIHFSQ 317
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 62/227 (27%), Gaps = 8/227 (3%)
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
H N Y + ND N P+ S D T
Sbjct: 358 HINDLNKNYTILNDGNDTLNIILSPKQKIDLRPRVSGGDGKDTLQITSSFIKSDVNINFK 417
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G L ++ + +D D +I I S
Sbjct: 418 GMRDVELIEFSGNYNSITISDSYVNSPIKFTDND--DNIIIKPRVYTILSGNGDDSIDAS 475
Query: 256 YEKNM-----TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT-FFY 309
I + +S+ GSS +D +IG N+ SGND+ G + DT +
Sbjct: 476 GSYGYNSARRYINGESGNDSIKGSSYDDTLIGGIGNDTISGGSGNDIIYGLAYDDTQYII 535
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + + + ++ D S + + + +N
Sbjct: 536 SQTNSSDVLKGENGSDDFFCDSQDTVDGGSGYDSVTLFTSNYEDINF 582
>gi|170743484|ref|YP_001772139.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
gi|168197758|gb|ACA19705.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
Length = 1265
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 62/305 (20%), Positives = 86/305 (28%), Gaps = 83/305 (27%)
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-------- 438
GRD FD Y Y DL G +R A HY+ HG EGR P
Sbjct: 37 RSVSWRFGRD-AFDPDFYAQLYPDLS---GLNRHALREHYVRHGRAEGRFPTRDAYLADL 92
Query: 439 ---------AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
F Y + DL F HF G EE R D
Sbjct: 93 TARHGALPEDFNPGLYGDLNPDLARRFTRDWQFTA----HFLKHGREEKRLYALDIAAEA 148
Query: 490 GSYDDLRNVFGSDRGAAARHYIT-HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
++ L + A ++ HG+ GR F ++I + D P
Sbjct: 149 ETFARLAGAEPREGLALFTGFLAAHGLAPGRWLRRFDLAQFIHLNAD---WLPAPPRTRA 205
Query: 549 AGKDHFSNFGYEEGRSI----TFNPDLYLTSY------DDLW------------------ 580
G F G + I F+P Y +Y DD
Sbjct: 206 EGIRLFVEQGIDRLAPIRTDAIFDPAFYRATYRAEGAADDAALYRHWLRQGIEQDFAPNE 265
Query: 581 --------------NVFGSDRSAA------------AQHYITHGMKEGRALGISGMQFKS 614
F + A +H++ HG EGR ++G + +
Sbjct: 266 AARIALLIGESAFPAAFAVETYRASLPRGAMSRTDLLEHWLDHGFPEGRLDVVTGPEAAA 325
Query: 615 VMNLS 619
+ L
Sbjct: 326 FLTLV 330
>gi|118098674|ref|XP_001232777.1| PREDICTED: similar to stromelysin-3 [Gallus gallus]
Length = 502
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 60/204 (29%), Gaps = 52/204 (25%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + YK + + + AL WS V LTF E
Sbjct: 112 LSGGRWDKTDLTYKIIRFPWQLVKSKV-------RRTIEEALKVWSDVTPLTFTEVQEGR 164
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G GT L
Sbjct: 165 ADIVIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGNNLGTDLL 222
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H + S+MS F Y
Sbjct: 223 QVAAHEFGHVLGLQHT-------------------TVSKSLMS--------PFYIFRYPL 255
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNN 205
+ D +Q +YG PK
Sbjct: 256 SLSEDDKQGIQYLYGKPKLDPDPT 279
>gi|163814823|ref|ZP_02206212.1| hypothetical protein COPEUT_00974 [Coprococcus eutactus ATCC 27759]
gi|158450458|gb|EDP27453.1| hypothetical protein COPEUT_00974 [Coprococcus eutactus ATCC 27759]
Length = 1709
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/451 (11%), Positives = 113/451 (25%), Gaps = 47/451 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ N S + D+ G T + G
Sbjct: 858 YGGEGNDKLYGNSGKDHLYGGSGDDLLDGGAGDDILEDEDGNDTYVFTRGY-------GK 910
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + +D ++ + + S D+
Sbjct: 911 DTIIDAGGSNTIQFLDLTPKDILVNGTGENDATIYIKNNSDSLTIKDFCKSEDLSDYTLQ 970
Query: 195 YGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLNTESW 250
+ + ++S ++T+ D + D + + I E
Sbjct: 971 FKNVSMHCTDEKSPFRHIYGTENSDDLRTVVDGSMVNAFAGDDKITASKLSDIIYANEGN 1030
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ + + TI +++ G +G+D++ G++ ++ +GND G +G DT+ +
Sbjct: 1031 DIVKAGDGSDTIYGGAGDDTLYGEAGDDIIWGDAGSDKLDGGAGNDKLYGGAGDDTYVFN 1090
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVER--------------LRFADQ------- 349
+ I + + + + ++ E L +D
Sbjct: 1091 KGYGIDIIDDQDGRMTIQLGADLDIQDITVFELGEEVVIKSVETDDMLIISDGKSIIDNV 1150
Query: 350 --CIDSVNVKQRSILEYTASYEDLIQVIGQDVFES------------MKHFYEFGLSEGR 395
+ R +L E D ++ + SE
Sbjct: 1151 LMESGDNTYEIRDMLSDIDGDEQYTVATATDASDAVFTERACGIIASGAGYDYIVASEDS 1210
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
DI F + + + Y G + + LI+
Sbjct: 1211 DIIFGDSDTDRILSGGSDDITYGGEGSDQLYGEDGNDFISGGTGNDYMNGGTGDDLLISG 1270
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ G D + F +G D+
Sbjct: 1271 SGNDFMDGGEGDDIYY-FNMGDGNDTITDAA 1300
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 85/275 (30%), Gaps = 31/275 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S +++ + T + D +D G G I + I
Sbjct: 1375 DTSKTEYMPTIYDDGVTIISSGGDDQLVGSDCSDTLIGGDGNNRITGNAGDDCI------ 1428
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+GG + +D+++ + ++ + + DI + +
Sbjct: 1429 ------DGGKGNDYLSGGSGSDTYIYKKGYGIDTINDDSGHNYIEISDYNIEDIHSYRTN 1482
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG----------GDDLLDLTLIGGVKNYID 244
+ +G+ I + S GD ++D+T ++
Sbjct: 1483 WNNLTMVMGDGDDTSLNNSDSDKLIIEGFFSSEKNREFSLIFGDTIIDITSYNSPARVLN 1542
Query: 245 LNT-----ESWSS----IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+ I GY+ T+ + + + G +G+D ++G + N+V SG+
Sbjct: 1543 GTPDNDQLGGFDDSGFVIYGYDGADTLNGSSGNDCLYGGTGDDRLLGAAGNDVLDGGSGD 1602
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
D +G G DT+ Y I + +
Sbjct: 1603 DHLEGGDGDDTYIIQRDFGNYTIKDDDGVNTLKFG 1637
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 75/283 (26%), Gaps = 25/283 (8%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D + + + + G N I + + G+SG D + G S +
Sbjct: 823 GTDENDQYSGTSLNDMV-FGEAGNDVLCGDIGNDIIYGGEGNDKLYGNSGKDHLYGGSGD 881
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
++ +G+D+ + G DT+ + I + + + +D L +
Sbjct: 882 DLLDGGAGDDILEDEDGNDTYVFTRGYGKDTIIDAGGSNTIQFLDLTPKDILVN------ 935
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT----FDSY 402
+ + + + + L + + +F F
Sbjct: 936 -------GTGENDATIYIKNNSDSLTIKDFCKSEDLSDYTLQFKNVSMHCTDEKSPFRHI 988
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
+ DDLR V A G + + ++ +
Sbjct: 989 YGTENSDDLRTVVDGSMVNAF-----AGDDKITASKLSDIIYANEGNDIVKAGDGSDTIY 1043
Query: 463 VQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDR 503
G D ++ D D L G D
Sbjct: 1044 GGAGDDTLYGEAGDDIIWGDAGSDKLDGGAGNDKLYGGAGDDT 1086
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 63/444 (14%), Positives = 105/444 (23%), Gaps = 88/444 (19%)
Query: 73 TSIHSDIKFISSNN------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
S SDI F S+ G D D G G +
Sbjct: 1206 ASEDSDIIFGDSDTDRILSGGSDDITYGGEGSDQLYGEDGNDFISGGTGNDYMNGGTGDD 1265
Query: 127 EIGHALGLMHPGSY--------NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
+ G N G + + ++ + +
Sbjct: 1266 LLISGSGNDFMDGGEGDDIYYFNMGDGNDTITDAAGENTIIFCDGIESDKIKAYRSDWND 1325
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLG----------------NNIYKIEVQQKDSPFIQTI 222
T +D V K Y K + G +++ + + ++ TI
Sbjct: 1326 LLITFAGTDDTLVLKKYCVDKDARGYRLVFADGYTGCATDKDSVLRNIYDTSKTEYMPTI 1385
Query: 223 YDSG-------------GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
YD G G D D + G N I N I G + N ++ + +
Sbjct: 1386 YDDGVTIISSGGDDQLVGSDCSDTLIGGDGNNRITGNAG-DDCIDGGKGNDYLSGGSGSD 1444
Query: 270 SVV--GSSGNDVVIGNSANNVF-------------FESSGNDVFDGSSGLDTFFYYAPSY 314
+ + G D + +S +N + N G DT + S
Sbjct: 1445 TYIYKKGYGIDTINDDSGHNYIEISDYNIEDIHSYRTNWNNLTMVMGDGDDTSLNNSDSD 1504
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLR--------------------------FAD 348
I F ++ + + D + D+ D
Sbjct: 1505 KLIIEGFFSSEKNREFSLIFGDTIIDITSYNSPARVLNGTPDNDQLGGFDDSGFVIYGYD 1564
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF---DSYLYL 405
L + L+ G DV + +G D D Y
Sbjct: 1565 GADTLNGSSGNDCLYGGTGDDRLLGAAGNDVLDGGSGDDHLEGGDGDDTYIIQRDFGNYT 1624
Query: 406 GSYDDLRNVFGSDRGAAARHYITH 429
DD N A +
Sbjct: 1625 IKDDDGVNTLKFGETIVASDIKVY 1648
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 69/576 (11%), Positives = 138/576 (23%), Gaps = 111/576 (19%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS--HNALHEIGHAL 132
D+ D G G T + + I
Sbjct: 1043 YGGAGDDTLYGEAGDDIIWGDAGSDKLDGGAGNDKLYGGAGDDTYVFNKGYGIDIIDDQD 1102
Query: 133 GLMHPGSYNGGY----PVYGVDNDYENDSFLTSVMSYFMPQDSMMD------ASFGYCAT 182
G M V+ + + S T M S++D Y
Sbjct: 1103 GRMTIQLGADLDIQDITVFELGEEVVIKSVETDDMLIISDGKSIIDNVLMESGDNTYEIR 1162
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYK-----------IEVQQKDSPFIQTIYDSGGDDLL 231
M+SDI ++ A + ++ S I+ D +
Sbjct: 1163 DMLSDIDGDEQYTVATATDASDAVFTERACGIIASGAGYDYIVASEDSDIIFGDSDTDRI 1222
Query: 232 -----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN--- 283
D GG + + I G N + T + ++ SGND + G
Sbjct: 1223 LSGGSDDITYGGEGSDQLYGEDGNDFISGGTGNDYMNGGTGDDLLISGSGNDFMDGGEGD 1282
Query: 284 --------SANNVFFESSG----------------------NDVFDGSSG-LDTFF---- 308
N+ +++G ND+ +G DT
Sbjct: 1283 DIYYFNMGDGNDTITDAAGENTIIFCDGIESDKIKAYRSDWNDLLITFAGTDDTLVLKKY 1342
Query: 309 -------------------------------YYAPSYLYKIYRFENAIIVYDANEHKQDF 337
Y Y +++ + + + Q
Sbjct: 1343 CVDKDARGYRLVFADGYTGCATDKDSVLRNIYDTSKTEYMPTIYDDGVTIISSGGDDQ-- 1400
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
L +D + + + A + + G D + +G I
Sbjct: 1401 ------LVGSDCSDTLIGGDGNNRITGNAGDDCIDGGKGNDYLSGGSGSDTYIYKKGYGI 1454
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
+ +Y ++ + D + ++ + G D ++ D
Sbjct: 1455 DTINDDSGHNYIEISDYNIEDIHSYRTNWNNLTMVMGDGDDT------SLNNSDSDKLII 1508
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ + ++ FG +++S + + + G + Y G
Sbjct: 1509 EGFFSSEKNREFSLIFGDTIIDITSYNSPARVLNGTPDNDQLGGFDDSGFVIYGYDGADT 1568
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
L + L+ A + +G DH
Sbjct: 1569 LNGSSGNDCLYGGTGDDRLLGAAGNDVLDGGSGDDH 1604
>gi|300866714|ref|ZP_07111398.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300335314|emb|CBN56558.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 949
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 57/198 (28%), Gaps = 16/198 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G+D + G N + I N I +
Sbjct: 678 NDAIAAGEGSDTLLGDLGNDTII----SGGGNDAISANQGDDLIDAGSGNDLIFAGKDND 733
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+++G G+D +IG+ + GND +G G D F + + I+
Sbjct: 734 AILGGDGDDKLIGDLGADTLIGGQGNDSLNGGDGAD--FLDGGAGDNIMLGGSGNDIIKG 791
Query: 330 A-------NEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
E D L S E L D L+ + L+ IG D
Sbjct: 792 GNGNNFLSGESGNDTLCGGSGSELLYGGDGADTLDGCVGNDTLKGDGGNDLLMAGIGDDF 851
Query: 380 FESMKHFYEFGLSEGRDI 397
S GRDI
Sbjct: 852 LIGGAGDDSLIGSAGRDI 869
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/218 (12%), Positives = 57/218 (26%), Gaps = 3/218 (1%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI ++V ++ G+ +D + +SANN GND G G D + + I
Sbjct: 599 TINPNSVDTNLEGTESDDFLKADSANNSINGFGGNDTLIGMIGNDNLY--GGNGNNWISA 656
Query: 321 FENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
E + F D + + + + + + + G D+
Sbjct: 657 NEGNDYINAGGGDNLVFAGKDNDAIAAGEGSDTLLGDLGNDTIISGGGNDAISANQGDDL 716
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
++ + D DL G
Sbjct: 717 IDAGSGNDLIFAGKDNDAILGGDGDDKLIGDLGADTLIGGQGNDSLNGGDGADFLDGGAG 776
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ + ++ + + + G D E
Sbjct: 777 DNIMLGGSGNDIIKGGNGNNFLSGESGNDTLCGGSGSE 814
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 82/271 (30%), Gaps = 20/271 (7%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI--GHALGLMHPGSYNGGY 144
+ I D G G I ++ I G L+ G N
Sbjct: 622 SANNSINGFGGNDTLIGMIGNDNLYGGNGNNWISANEGNDYINAGGGDNLVFAGKDNDAI 681
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ D +++S + +D++ K A G G+
Sbjct: 682 AAGEGSDTLLGDLGNDTIISGGGNDAISANQGDDLIDAGSGNDLIFAGKDNDAILGGDGD 741
Query: 205 NIYKIE---VQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGY 256
+ + ++ G D LD ++GG N I + + G
Sbjct: 742 DKLIGDLGADTLIGGQGNDSLNGGDGADFLDGGAGDNIMLGGSGNDIIKGGNGNNFLSGE 801
Query: 257 EKNMTIAQHTVIESVVGSSG---------NDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
N T+ + E + G G ND + G+ N++ G+D G +G D+
Sbjct: 802 SGNDTLCGGSGSELLYGGDGADTLDGCVGNDTLKGDGGNDLLMAGIGDDFLIGGAGDDSL 861
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
A ++ + E V D E QD L
Sbjct: 862 IGSAGRDIFVLTIGEGNDRVID-FEKGQDLL 891
>gi|254563923|ref|YP_003071018.1| hypothetical protein METDI5608 [Methylobacterium extorquens DM4]
gi|254271201|emb|CAX27213.1| hypothetical protein METDI5608 [Methylobacterium extorquens DM4]
Length = 781
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 79/267 (29%), Gaps = 41/267 (15%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALG-LMHPGS--------YNGGYPVYGVDNDY 153
F G HEIGH LG L P + +NG +
Sbjct: 105 WFYDPTGVAAAPGNRFDAFTIFQHEIGHGLGFLEFPATVGANGLLLFNGENTRTVLGGPV 164
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
D V + +G + D+ +Q + ++
Sbjct: 165 VLDGARAHV--WGSEDLMDPYLGWGQRSYISDLDLAMLQDKGMPISTERADKMWLGNR-- 220
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
T + GGDD +D G + + ++++G
Sbjct: 221 -----ADTFFAYGGDDWID----------------------GGWGDDKLFGGAGNDTLIG 253
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY-KIYRFENAIIVYDANE 332
+ GND + G + ++ +G D DG G+D S Y +Y ++ V
Sbjct: 254 ADGNDALDGGAGDDTLIGGNGGDTLDGGEGIDRAVLTGRSQDYVALYGAAGSLAVKHLGS 313
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQR 359
D L+ +E L F D + +
Sbjct: 314 GSIDTLTSIETLNFDDTVLGMSGLLAH 340
Score = 44.4 bits (103), Expect = 0.071, Method: Composition-based stats.
Identities = 34/227 (14%), Positives = 55/227 (24%), Gaps = 49/227 (21%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+ + D + + + FF G+D DG G D F
Sbjct: 207 ISTERADKMWLGNRADTFFAYGGDDWIDGGWGDDKLF----------------------G 244
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L + L+ A + LI G D + + L
Sbjct: 245 GAGNDTL---------------IGADGNDALDGGAGDDTLIGGNGGDTLDGGEGIDRAVL 289
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY----------ITHGVKEGRNPDAFK 441
+ GR + LY + GS G+
Sbjct: 290 T-GRSQDY-VALYGAAGSLAVKHLGSGSIDTLTSIETLNFDDTVLGMSGLLAHLQQRFGP 347
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
A +E +NA AD + + + RF +
Sbjct: 348 VQAGKAPYEMALNAAADDAFRPDIPEIDGAFSVTARVRFDDLAGGHF 394
>gi|307944841|ref|ZP_07660179.1| hemolysin-type calcium-binding region [Roseibium sp. TrichSKD4]
gi|307772055|gb|EFO31278.1| hemolysin-type calcium-binding region [Roseibium sp. TrichSKD4]
Length = 6021
Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 64/478 (13%), Positives = 115/478 (24%), Gaps = 30/478 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ G T + AD G G TI HALG
Sbjct: 4936 DGGTGNDTINGGGGADTLTGGAGNDTLSGGGGADTVNGGSGDDTI----------HALGD 4985
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ +T + ++ + + A + D+ A
Sbjct: 4986 GDTIDGGADTDTVSYAA-ATSGVAVTLGAAGDDTISNVENLTGSSHADTLTGDVSANVID 5044
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + T+ G+D L G +DL+ S +
Sbjct: 5045 GG-----------TGDDTIIGGAGNDTLSGGAGNDTLSYAGNSGAV-TVDLSANSNNQGD 5092
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ +++ G+S + +IG + N+ +GND G +G+DT Y +
Sbjct: 5093 TISGFENVTGSDHADTLTGNSAANTIIGGAGNDTISGGAGNDTLSGGAGVDTLSYAGAAS 5152
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
N ++ D +S E L +D + L A + L
Sbjct: 5153 SVTADLSSNT-------NNQGDTISGFENLIGSDHADTLTGTNSANTLTGGAGNDTLTGG 5205
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D + D + + + V+
Sbjct: 5206 GGADTVSAGSGDDTINALGDGDTIDGGADTDTVSYASATGGVTATLSGSADDTISNVENL 5265
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
L AS + + + G D + + +
Sbjct: 5266 TGSSHADTLTGDASANVIDGGAGNDTIIGGAGNDTLTGGTGTDTLSYAGAASGVTVDLST 5325
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
N G + + L + + L A AG D
Sbjct: 5326 NSNNQGDTISGFENVTGSDNADTLTGDGSANTLSGGSGDDTLTGAGGADTINAGAGTD 5383
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 70/492 (14%), Positives = 119/492 (24%), Gaps = 18/492 (3%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM------ 135
+ T + D AD G G + I G+
Sbjct: 1554 TLTGTDDANTLSGGLGNDVLNGLDGADTLLGGGGNDVLNGGAGADTIIGGSGIDVVDYSD 1613
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
N L+ V S + T + V
Sbjct: 1614 SSAGVRVNLETNSNQNGDAEGDNLSEVESITGSGFDDILTGDAVANTILGGAGADVLVGG 1673
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + I+ ++G D T + + ++ G
Sbjct: 1674 NGGDTLDGGDGIDRVDYTSSVAAIEVDLEAGTADGSHATGDTLLNIENLTGSNFNDTLSG 1733
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
++N I +++ G +G D + GN ++V G D DG G DT Y S
Sbjct: 1734 DDQNNVIEGGLGDDTIAGEAGADTLEGNGGSDVLIGGLGADQLDGGDGNDTASYSGSSAG 1793
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
I V E D L+++E + +D +++ A + L +
Sbjct: 1794 VVIDLNLAGAQVSAGTEAHGDVLTNIENITGSDFDDTLTGDDVANMIRAGAGDDVLDGGL 1853
Query: 376 GQDVFESMKHFYEFGLSEGR-------DITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
G D + S+ D D L ++ A H +
Sbjct: 1854 GADTLDGGDGVDLVDYSDSSTAVTAYLDGVTTGIGGSAQGDTLTDIENLTGSAFHDHLVG 1913
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+ A + D + + E G D+
Sbjct: 1914 NTSANTLTGGAGNDVLEGRGGADTLIGGTGTDTADYSASNSAVTVNLETGMGTGGDAEGD 1973
Query: 489 LGSY-----DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
S N + + Y G D L + + L +
Sbjct: 1974 TLSEIEEVIGSDYNDTLTASTTGSTLYGEDGDDTLVGGDGNDELHGGSDDDTLTGGAGND 2033
Query: 544 PDLVQAGKDHFS 555
AG D F
Sbjct: 2034 DLYGDAGADRFI 2045
Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 67/488 (13%), Positives = 121/488 (24%), Gaps = 16/488 (3%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + + + S+ G + +S + D + G + L
Sbjct: 3793 AGNDTLDYSGSSAGVSVNLQNNSASGGDAQGDIFSGFENVTGSDHRDWLTGRDGEDNILS 3852
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G + + S + + D +
Sbjct: 3853 GAGGNDILYGSTGADQLIGGDGIDYAYYRYSASGVTIDLSAGTVVGSGGDAEGDTYDSIE 3912
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
Y I + D I G TLIGG + SI
Sbjct: 3913 RYYGANSHADTMIAGNDSAYFDGAGGNDILTGG---SAADTLIGGNGSDTLTGNGGNDSI 3969
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + + TI ++V G +GND + G + ++ +G+D+ G +G DT +
Sbjct: 3970 QGNDGDDTIDAGDGNDNVTGGAGNDTITGGAGDDTIDTGAGDDLVYGGAGADTL--SGGT 4027
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ ++ V D E + + L + L
Sbjct: 4028 GADTLDYSASSDAVVIDLGANTASGGDAEGDSISGFE-TLIGSAHDDTLTGDGNANTLSG 4086
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D G D + D GA G
Sbjct: 4087 GDGNDTLSGGGGADTINGGSGDDEIVGG----------ADGDSVDGGAGTDTISYAGSSS 4136
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
G + + + + + A L D+ G + L
Sbjct: 4137 GVDALLTGTADDTILNVENLIGSAHDDTLRGDTGDNEITGGDGDDTISGLGGNDVLDGGA 4196
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ + + GA + T +G F+ LE +DL G D
Sbjct: 4197 GVDTLSYATMGAVVANLSTGANNQGDTISGFENLEGSQQGDDLTGDAGVNTITGGDGNDT 4256
Query: 554 FSNFGYEE 561
+ G +
Sbjct: 4257 IAGLGGAD 4264
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 62/493 (12%), Positives = 114/493 (23%), Gaps = 25/493 (5%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
ET I SD + N T + +D G G T+ + +
Sbjct: 4656 VETLIGSDHADTLTGNSSANTISGGDGNDIIDGGAGSDTLSGGAGNDTLSYASTAGAVTA 4715
Query: 131 AL--GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
L G G+ + + + + + G T
Sbjct: 4716 NLATNANDQGDTISGFENLTGSDHDDALTGDATSNIISGGAGDDTISGGGGADTLAGGAG 4775
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
A + Q + + S +D L
Sbjct: 4776 TDTLSYAAAVGSVTVDLSSNTNNQSDTISGFENLVGSDHNDTLT-------------GDA 4822
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ I G N TI +++ G +GND + G + + SG+D + DT
Sbjct: 4823 GSNDIDGGAGNDTINGGGGADTLTGGAGNDTLSGGAGTDTVTAGSGDDTIEALGDGDTI- 4881
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD---------QCIDSVNVKQR 359
Y ++ + D +S+VE L + +
Sbjct: 4882 DGGADTDTVTYASASSGVTAALGGSGDDTISNVENLTGSSHADTLTGDVTANEIDGGTGN 4941
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+ + L G D G D S
Sbjct: 4942 DTINGGGGADTLTGGAGNDTLSGGGGADTVNGGSGDDTIHALGDGDTIDGGADTDTVSYA 5001
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
A + +T G + L + + L + G D +
Sbjct: 5002 AATSGVAVTLGAAGDDTISNVENLTGSSHADTLTGDVSANVIDGGTGDDTIIGGAGNDTL 5061
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
+ + + + + G + D L ++ +I
Sbjct: 5062 SGGAGNDTLSYAGNSGAVTVDLSANSNNQGDTISGFENVTGSDHADTLTGNSAANTIIGG 5121
Query: 540 FADAPDLVQAGKD 552
+ AG D
Sbjct: 5122 AGNDTISGGAGND 5134
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/488 (12%), Positives = 113/488 (23%), Gaps = 29/488 (5%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ + T D D G TI + I HALG G
Sbjct: 5341 TGSDNADTLTGDGSANTLSGGSGDDTLTGAGGADTINAGAGTDTI-HALGDGDTIDGGSG 5399
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ S + + + T V G
Sbjct: 5400 TDTVSYASASAGVSITLGGSADDTISNVENLTGSVHNDTLTGDATANVIDGGAGNDTISG 5459
Query: 204 N------NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNTESWSS 252
TI GDD + G G + S
Sbjct: 5460 GNGNDTLTGGLGNDTLSGGAGTDTINAGSGDDTIHALGDGDTINGGADTDTVTYASASSG 5519
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + +E++ GSS DV+ G+ ++N +G+D G +G DT A
Sbjct: 5520 VTATLGGAEDDTISNVENLTGSSHGDVLTGDGSDNTIDGGAGDDTISGGAGNDTLIGGAG 5579
Query: 313 SYLYKIYRFENAIIV--YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +A+ V ++ D +S E + Q ++++ A +
Sbjct: 5580 TDTLSYAAAGSAVTVNLATNANNQGDTISGFENATGSAQGDTLTGDASANVIDGGAGDDT 5639
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ G D + S + + G
Sbjct: 5640 IAGGSGNDTLSGGTGTDTLNYAAATTAVVASLADNSNN---------------QGDTISG 5684
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+ L AS + + G D + S
Sbjct: 5685 FENLTGSAQGDTLTGDASANVIDGGAGNDTIEGGAGNDTLLGGTGTDTLSYASASGAVTV 5744
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+ D N G + + + A ++ + +G
Sbjct: 5745 NLADNSNDQGDTISGFENLTGSAHDDTLTGNSSANTITGGAGNDTISGGSGADTVNAGSG 5804
Query: 551 KDHFSNFG 558
D + G
Sbjct: 5805 NDTVNALG 5812
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/357 (14%), Positives = 90/357 (25%), Gaps = 1/357 (0%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ + AD G G TI + G G + D +
Sbjct: 2546 AGADTLQGGEGADTLEGGEGNDTIDGGEGDDTVLAGGGADTIAGSAGDDDIDAGDGNDTI 2605
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
+ +D S A + D + A L N D
Sbjct: 2606 AGGAGADAIDGGAGFDHLDYSASTAAVNVAVDGAQIGVGGLAEGDVLSNIEQITGSAYDD 2665
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
D D L G + ++ G + T+ +++ G +
Sbjct: 2666 DITGSASNDLLLGGDGDDELYGSAGDDTLRGEAGEDTLSGGDGADTLEGGDANDTLQGGA 2725
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D + G S ++ +G D G +G DT Y + + N +
Sbjct: 2726 GDDTLDGGSGDDSLEGGAGADTITGGAGTDTVSYAGSANGVTV-DLANTGAQVSGGDANG 2784
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D +S VE + + + + A + + G D + G
Sbjct: 2785 DTISGVENILGSSSSDTLTGDDNSNEIVAGAGNDIVSGGAGDDTLSGGDGDDTLSGNTGN 2844
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
D D + S G +Y +S + +
Sbjct: 2845 DALLGGAGVDTLSGDEGDDTLSGGAGDDTLIGGVGEDTIDGGAGVDTADYSSSVDAV 2901
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 62/476 (13%), Positives = 125/476 (26%), Gaps = 17/476 (3%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL--GLMHPGS 139
+ + + I D G G T+ A + L + G
Sbjct: 5273 TLTGDASANVIDGGAGNDTIIGGAGNDTLTGGTGTDTLSYAGAASGVTVDLSTNSNNQGD 5332
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
G+ ++ + + S + G T G
Sbjct: 5333 TISGFENVTGSDNADTLTGDGSANTLSGGSGDDTLTGAGGADTINAGAGTDTIHALGDGD 5392
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT--LIGGVKNYIDLNTESWSSIGGYE 257
G + S + DD + L G V N + + I G
Sbjct: 5393 TIDGGSGTDTVSYASASAGVSITLGGSADDTISNVENLTGSVHNDTLTGDATANVIDGGA 5452
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N TI+ +++ G GND + G + + SG+D DT
Sbjct: 5453 GNDTISGGNGNDTLTGGLGNDTLSGGAGTDTINAGSGDDTIHALGDGDTI-NGGADTDTV 5511
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
Y ++ + + D +S+VE L + + ++ A + + G
Sbjct: 5512 TYASASSGVTATLGGAEDDTISNVENLTGSSHGDVLTGDGSDNTIDGGAGDDTISGGAGN 5571
Query: 378 DVFESMKHFYEF-GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + G +T + + D + F + G+A +
Sbjct: 5572 DTLIGGAGTDTLSYAAAGSAVTVNLATNANNQGDTISGFENATGSAQGDTL-------TG 5624
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ ++ A + + + G D + + + D
Sbjct: 5625 DASANVIDGGAGDDTIAGGSGNDTLSGGTGTDTLNYAAATTAVVASLADN--SNNQGDTI 5682
Query: 497 NVFGSDRGAAARHYITHGVKEG--RNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+ F + G+A +T +E A ++ L+ +
Sbjct: 5683 SGFENLTGSAQGDTLTGDASANVIDGGAGNDTIEGGAGNDTLLGGTGTDTLSYASA 5738
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 60/476 (12%), Positives = 116/476 (24%), Gaps = 25/476 (5%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
T S I AD G G T + L +
Sbjct: 1311 DTLSGGSGSDTLIGGAGADTLSGGAGSDTADYSGGSVAVVIDLASGTASGGDADGDTLSS 1370
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ ++ + +D + G + +
Sbjct: 1371 IENATGTDHADTLTGNADKNTLIGGGGNDVLDGGANADTL--------IGGDGIDTVTYE 1422
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + + GD D+ + ++ I G ++ + +
Sbjct: 1423 NSAGNVIVNLASGTGANGDAQGDILSQIENV----IGSDQSDVIEGDFRDNVLTGGAGYD 1478
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+ G+D +IG N+ +G D DG +G DT Y + I
Sbjct: 1479 TLTGNEGDDQLIGGDGNDTLRGGAGADTLDGGAGSDTADYSTETTAVTIDLDAGT----- 1533
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ D +E L + + L + L + G D
Sbjct: 1534 --SNTGDTFISIENLTGTSEDDTLTGTDDANTLSGGLGNDVLNGLDGADTLLGGGGNDVL 1591
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G D D + R + +G EG N +++
Sbjct: 1592 NGGAGADTIIGGSGI--DVVDYSDSSAGVRVNLETNSNQNGDAEGDNLSEVESITGSGFD 1649
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD----SYLYLGSYDDLRNVFGSDRGA 505
+ L L G D + Y + ++ G+ G+
Sbjct: 1650 DILTGDAVANTILGGAGADVLVGGNGGDTLDGGDGIDRVDYTSSVAAIEVDLEAGTADGS 1709
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
A ++ + L + + D +AG D G +
Sbjct: 1710 HATGDTLLNIENLTGSNFNDTLSGDDQNNVIEGGLGDDTIAGEAGADTLEGNGGSD 1765
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 61/482 (12%), Positives = 113/482 (23%), Gaps = 20/482 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL-HEIGHALGL 134
+ + + + + AD G+G T+ + + H G
Sbjct: 942 GGAGDDVFTGDANDNSFVGGAGNDWARGGGGADTLSGGVGTDTVSYSLSDEGVVLHLDGT 1001
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G G V G + + T +
Sbjct: 1002 ASTGGTAEGDQVSGFEVVDGSAHDDTVYGTSADEVFRGAGGDDTLIGG------------ 1049
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G G + + ++G D L + ++
Sbjct: 1050 -GGADTFEGGAGTDTVSYETAGSGVSVNLETGATGSGDEAGDTFDSIERLLGSVHDDTLT 1108
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ + ++++G + +D + G S ++ ++G DV DG G+DT Y S
Sbjct: 1109 AANAGSVLDGNEGDDTLIGGTSDDTLRGGSRDDTLTGNAGADVLDGGDGIDTVSYSGSSA 1168
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
I +A + D L ++E + + + L + L+
Sbjct: 1169 AVTIDLAADAANDASGGDAAGDDLFNIENVVGSAHDDHLSGDDGDNTLTGGDGDDVLVGR 1228
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D S+ + D V G
Sbjct: 1229 GGADALFGGAGNDTADYSDSESAIELDLATGVGAGGDADGDTFDSIETIIATEHDDVIAG 1288
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
L + + L D G D + S S
Sbjct: 1289 --DAQDNDLRGLGGDDTLSGRDGDDTLSGGSGSDTLIGGAGADTLSGGAGSDTADYSGGS 1346
Query: 495 LRN----VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+ G+ G A ++ D L A LI + A
Sbjct: 1347 VAVVIDLASGTASGGDADGDTLSSIENATGTDHADTLTGNADKNTLIGGGGNDVLDGGAN 1406
Query: 551 KD 552
D
Sbjct: 1407 AD 1408
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 70/504 (13%), Positives = 136/504 (26%), Gaps = 39/504 (7%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + F +N G+ T + + AD G G T +N+ G +
Sbjct: 3573 IATDYNDTFSHANAGWAWTYQLGAGNDTIEAGGGADTIDGGTGTDTASYYNSNA--GVTV 3630
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
L G+ G + S + D+ ++ G +S
Sbjct: 3631 NLTVSGAQTSSGHASGDVLSNIENLVGAHEYSNTLTGDASANSLTGGREDDTLSGGAGDD 3690
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY---IDLNTES 249
++G + + G+D + + T
Sbjct: 3691 SLFGED----------GDDLLTGGAGADALDGGDGEDTASYRTSAAGVSVNLATNTATGG 3740
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ Y + +++ G + ++ + G+ ++V +G+D G +G DT Y
Sbjct: 3741 DAQGDTYTSIEVLQGSDHDDTLFGDAEDNDLYGHDGDDVINGGAGHDTLVGGAGNDTLDY 3800
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S + N+ + + D S E + +D
Sbjct: 3801 SGSSAGVSVNLQNNSAS---GGDAQGDIFSGFENVTGSDHRDWLTGRDGED--------N 3849
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G D+ + +G D + Y G DL G
Sbjct: 3850 ILSGAGGNDILYGSTGADQLIGGDGIDYAYYRYSASGVTIDLSAGTVVGSG--------- 3900
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G EG D+ + SH D + A D+ G + G + + L
Sbjct: 3901 GDAEGDTYDSIERYYGANSHADTMIAGNDSAYFDGAGGNDILTGGSAADTLIGGNGSDTL 3960
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
++ G+D G + A + + D A
Sbjct: 3961 TGNGGNDSIQGNDGDDTID--AGDGNDNVTGGAGNDTITGGAGDDTIDTGAGDDLVYGGA 4018
Query: 550 GKDHFSNFGYEEGRSITFNPDLYL 573
G D + G ++ ++
Sbjct: 4019 GAD--TLSGGTGADTLDYSASSDA 4040
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 62/462 (13%), Positives = 111/462 (24%), Gaps = 15/462 (3%)
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYNGGYPVYGVDNDYEN 155
+ G G + E+ +G + GS + +
Sbjct: 613 DQLTGDGADNRLEGGDGNDLLHGGAGADELVGGIGSDIADYQGSDAVNVDLQAGTATGGD 672
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
T + S D G A +S I G + +
Sbjct: 673 AQGDTLTSIEGLIGSSNDDTLLGSSANNTISGGAGNDIIAGVGGTNTLRGDAGDDTFTGG 732
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKN---YIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
SG D + I ++ Y + ++++
Sbjct: 733 LGEDAIDGGSGAADSITYVASNTGVTVNLTIGTGQGGHAAGDTYANLENVTGSAFDDTLI 792
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS+ ++V+ G ++ G D G +G DT Y + ++ ++
Sbjct: 793 GSTADNVLSGGDGDDYLEGGQGADTLSGGAGSDTVSYETANAAVQVDLSTGTAT---GSD 849
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D LS +E L + + + E A + L G D F S
Sbjct: 850 ATGDTLSSIENLVGSAYGDELTGDASDNRFEGGAGDDVLQGGAGADDLIGGAGFDVADYS 909
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
+T D + G G + A ++
Sbjct: 910 NSSAVTVDLNISAAQSG--GEAEGDTLSDIEGVIGGAGDDVFTGDANDNSFVGGAGNDWA 967
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH--- 509
VG D S +EG + D G + V G + + H
Sbjct: 968 RGGGGADTLSGGVGTDTVSYSLSDEGVVLHLDGTASTGGTAEGDQVSGFEVVDGSAHDDT 1027
Query: 510 -YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
Y T + R L + +
Sbjct: 1028 VYGTSADEVFRGAGGDDTLIGGGGADTFEGGAGTDTVSYETA 1069
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/407 (14%), Positives = 104/407 (25%), Gaps = 42/407 (10%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+ + D + S + + + + A
Sbjct: 2933 GNDTLTGNAEANRLEGGDGDDLFIASAENDTVVGGLGTDTVDYSGATNIVDANLGTGVIS 2992
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSI 253
LGN+ S TI + L + T+ G E ++
Sbjct: 2993 SNGLGNDSVTGIENVIGSAQADTITGDANSNALTGAAGNDTISGAGGADTITGDEGDDTL 3052
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + T++ + V G G D + G ++ +G D+ DG G DT Y S
Sbjct: 3053 SGDGGDDTVSGGEGNDHVSGGDGADTLSGGVGDDRLVGGAGADIIDGGDGTDTVDYSGSS 3112
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS------ 367
+ A A D +++VE L + +++
Sbjct: 3113 AAVTV-DLGLATQAAGAGVEAGDQITNVENLDGSAFNDTLSGDAGANLIRGLDGGDAING 3171
Query: 368 ---------------------YEDLIQVIGQDVFESMKHFYEFGLSEGRDIT----FDSY 402
+ L +G D+ + EG D D
Sbjct: 3172 AAGNDEIEGGDGDDTIDGGADNDSLDGGLGNDIMDGGDGVDTVYGGEGNDTLDGGAGDDT 3231
Query: 403 LYLGSYDDLRNVFGSD-----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
+ G DD + G D A Y+ G + + L +
Sbjct: 3232 VIGGLGDDTLSGGGGDDAVSGGSGADTFYVDAGSDQLDGGEGIDTLSLENETAGVTLNLG 3291
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ V + + E D +L +++ N D
Sbjct: 3292 TPANNVGTNVEGDTYSSIENITGSDHDDHLTGDLENNVINAGAGDDT 3338
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 58/425 (13%), Positives = 116/425 (27%), Gaps = 29/425 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ D+ I +D G G T+ + + L
Sbjct: 2019 GGSDDDTLTGGAGNDDLYGDAGADRFIGGAGSDEHYGGTGIDTVDYLASTAAVTANLDSG 2078
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV------ 189
+ + +YG + ++ + A D +
Sbjct: 2079 SGSAGDAAGDIYGDVENLVGTAYDDRLTGDGGSNVLTAGAGDDVLIGNGGDDTLLGEAGD 2138
Query: 190 -AVQKIYGAPKGSLGNNIYKIEVQQKDSPFI----------QTIYDSGGDDLLDLTLIGG 238
+ GA + G+ + + + + +SG L G
Sbjct: 2139 DTLIGGAGADILTGGDGVDTADYSGSTNAVTVDLNLATQATSSGDESGDVLTGIENLKGS 2198
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ + + + I G +N TI+ ++++G +G+D + G N+V +GND
Sbjct: 2199 EQADTLIGDGAANRISGGLENDTISGGAGDDTLLGEAGDDTLDGGVGNDVHDGGAGNDTL 2258
Query: 299 ---------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G +G DT Y A S I +A + + D L +E + +
Sbjct: 2259 LGSAGADTLIGGAGSDTVSYAASSAAVTIDLSADAAGDASGGDAEGDDLDQIENVIGSAH 2318
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ +E A + + D T + LG+
Sbjct: 2319 NDTLTGDSGVNRIEGGAGDDTVFATASNDTLIGGAGTDTISY---VAATGSVTVDLGAET 2375
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
G+D + + + + D+I+ A L+ D
Sbjct: 2376 ASGGGVGTDSVREFENIVGSANDDTLTGSSLDNTISGGVGNDVIDGAAGDDTLLGEDGDD 2435
Query: 470 FSNFG 474
G
Sbjct: 2436 TLRGG 2440
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/290 (15%), Positives = 82/290 (28%), Gaps = 14/290 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + T+ G+D + N + S +
Sbjct: 479 GDDTVIVAAGADTVTGGAGEDTVSYRDSASAVTADLSNNANNSGGYAEGDEYF-----GV 533
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E++ GSS +D + GN+ +NV +G D G G+DT Y S ++ +
Sbjct: 534 ENLTGSSFSDTLTGNTGDNVLEGGAGADTLTGGGGVDTAAYTQSSAGVRVDLSTG---DH 590
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ + D L+ + LR + + LE + L G D
Sbjct: 591 SGGDAEGDVLTGITNLRGSVYDDQLTGDGADNRLEGGDGNDLLHGGAGADELVGGIGSDI 650
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+ D + D G + + A + A
Sbjct: 651 ADYQGSDAVNVDLQAGTATGGD---AQGDTLTSIEGLIGSSNDDTLLGSSANNTISGGAG 707
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCE---EGRFVTFDSYLYLGSYDDL 495
++ + G D F+ E +G DS Y+ S +
Sbjct: 708 NDIIAGVGGTNTLRGDAGDDTFTGGLGEDAIDGGSGAADSITYVASNTGV 757
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 59/447 (13%), Positives = 110/447 (24%), Gaps = 9/447 (2%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ G S + + D G TI + I G G
Sbjct: 4214 STGANNQGDTISGFENLEGSQQGDDLTGDAGVNTITGGDGNDTIAGLGGADILDGGAGSD 4273
Query: 145 PVYGVDND-YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
V T + + A + VA + GA ++
Sbjct: 4274 TVNYSAATGSVVVDLATQTNNQGDTLSNFEGVIGSDNADTLTGSSVANEISAGAGDDTI- 4332
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ TI G +D +Y + ++ +IGG +
Sbjct: 4333 -TLAGGADTVDAGTGDDTISALGTGATIDGGAGSDTLSYENSSSGVSITIGGAGDDDV-- 4389
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ IE++ GS +D + G++ +N GND G DT
Sbjct: 4390 --SNIENLTGSDHDDTLTGDTNSNNISGGDGNDTIASGGGGDTLSGGDGIDTISYAAATG 4447
Query: 324 AIIV--YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
++ V ++ D +S E + + Q + +++ A + L G D
Sbjct: 4448 SVTVDLSTQTTNQGDTISGFENVTGSAQDDTLLGSDDANVITGGAGNDTLDGAGGVDTIT 4507
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ D + + V+
Sbjct: 4508 AGDGDDTITGRGDGDTIDGGAGTDTLTYATASAGVDVTLGGSGDDAVSNVEVLIGSGHAD 4567
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
L A+ + + G D + + + + D G
Sbjct: 4568 TLTGDAAANTISGGAGNDTVSGGAGNDTLTGGTGTDTINGGGGDDVIAATGDGDTIDGGF 4627
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALE 528
D + GV G + L
Sbjct: 4628 DTDTVTYAAASAGVTVGLDGTGDDTLS 4654
Score = 58.3 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 50/378 (13%), Positives = 95/378 (25%), Gaps = 28/378 (7%)
Query: 60 GEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
S + ++ ++ ++ A+V G G TI
Sbjct: 5581 DTLSYAAAGSAVTVNLATNANNQGDTISGFENATGSAQGDTLTGDASANVIDGGAGDDTI 5640
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
+ + G Y S + + + +
Sbjct: 5641 AGGSGNDTL--------SGGTGTDTLNYAAATTAVVASLADNSNNQGDTISGFENLTGSA 5692
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ D A GA + T+ G D L G
Sbjct: 5693 QGDTLTGDASANVIDGGA-----------GNDTIEGGAGNDTLLGGTGTDTLSYASASGA 5741
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
++L S + +++ G+S + + G + N+ SG D +
Sbjct: 5742 V-TVNLADNSNDQGDTISGFENLTGSAHDDTLTGNSSANTITGGAGNDTISGGSGADTVN 5800
Query: 300 GSSGLDTF--------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
SG DT Y + + + D +S+VE L +
Sbjct: 5801 AGSGNDTVNALGDGDTIDGGADTDTVSYASASTGVTATLGGSEDDTISNVENLTGSAHND 5860
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+++ A + + G D F L EG + G D +
Sbjct: 5861 TLSGDASANVISGGAGDDTIDGGGGADTLNGGAGNDTFTLDEGSIDLGATLNGGGDTDTV 5920
Query: 412 RNVFGSDRGAAARHYITH 429
G+ A +T+
Sbjct: 5921 NFASGAYEAADVDGVLTN 5938
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 59/433 (13%), Positives = 102/433 (23%), Gaps = 38/433 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S T S D G T+ +A + LG
Sbjct: 5467 TGGLGNDTLSGGAGTDTINAGSGDDTIHALGDGDTINGGADTDTVTYASASSGVTATLGG 5526
Query: 135 MHPG---------SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+ G + G +D D + + G
Sbjct: 5527 AEDDTISNVENLTGSSHGDVLTGDGSDNTIDGGAGDDTISGGAGNDTLIGGAGTDTLSYA 5586
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQK-----------------DSPFIQTIYDSGGD 228
+ AV + G+ I E TI G+
Sbjct: 5587 AAGSAVTVNLATNANNQGDTISGFENATGSAQGDTLTGDASANVIDGGAGDDTIAGGSGN 5646
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L NY T +S+ N + E++ GS+ D + G+++ NV
Sbjct: 5647 DTLSGGTGTDTLNYAAATTAVVASLADNSNNQG-DTISGFENLTGSAQGDTLTGDASANV 5705
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--YDANEHKQDFLSDVERLRF 346
+GND +G +G DT + A+ V D + + D +S E L
Sbjct: 5706 IDGGAGNDTIEGGAGNDTLLGGTGTDTLSYASASGAVTVNLADNSNDQGDTISGFENLTG 5765
Query: 347 A---------DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ + + + + G D ++ D
Sbjct: 5766 SAHDDTLTGNSSANTITGGAGNDTISGGSGADTVNAGSGNDTVNALGDGDTIDGGADTDT 5825
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
+ G L + + + A + +
Sbjct: 5826 VSYASASTGVTATLGGSEDDTISNVENLTGSAHNDTLSGDASANVISGGAGDDTIDGGGG 5885
Query: 458 DAPDLVQVGKDHF 470
G D F
Sbjct: 5886 ADTLNGGAGNDTF 5898
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 62/485 (12%), Positives = 115/485 (23%), Gaps = 41/485 (8%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
S D D I + I G +G +
Sbjct: 4390 SNIENLTGSDHDDTLTGDTNSNNISGGDGNDTIASGGGGDTLSGGDGIDTISYAAATGSV 4449
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
L++ + S + G + I G +
Sbjct: 4450 TVDLSTQTTNQGDTISGFENVTGSAQDDTLLGSDDANVITGGAGNDTLDGA-GGVDTITA 4508
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
TI G D +D Y + ++GG + + +E ++GS
Sbjct: 4509 GDGDDTITGRGDGDTIDGGAGTDTLTYATASAGVDVTLGGSGDDAV----SNVEVLIGSG 4564
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSS--------------------------GLDTFFY 309
D + G++A N +GND G + G
Sbjct: 4565 HADTLTGDAAANTISGGAGNDTVSGGAGNDTLTGGTGTDTINGGGGDDVIAATGDGDTID 4624
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
Y +A + + D LS+VE L +D + + +
Sbjct: 4625 GGFDTDTVTYAAASAGVTVGLDGTGDDTLSNVETLIGSDHADTLTGNSSANTISGGDGND 4684
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D + + + + D + +
Sbjct: 4685 IIDGGAGSDTLSGGAGNDTLSYA-------STAGAVTANLATNANDQGDTISGFENLTGS 4737
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+ DA + + +D I+ A L ++ G VT D
Sbjct: 4738 DHDDALTGDATSNIISGGAGDDTISGGGGADTLAGGAGTDTLSYAAAVG-SVTVDLSSNT 4796
Query: 490 GSYDDLRNVFGSDRGA--AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
+ D + F + G+ G + + + L +
Sbjct: 4797 NNQSDTISGFENLVGSDHNDTLTGDAGSNDIDGGAGNDTINGGGGADTLTGGAGNDTLSG 4856
Query: 548 QAGKD 552
AG D
Sbjct: 4857 GAGTD 4861
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 60/482 (12%), Positives = 113/482 (23%), Gaps = 24/482 (4%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
S G S +D G G T+ N + LG
Sbjct: 3240 TLSGGGGDDAVSGGSGADTFYVDAGSDQLDGGEGIDTLSLENETAGVTLNLGTPANNVGT 3299
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ S ++ + + + + + YG
Sbjct: 3300 NVEGDTYSSIENITGSDHDDHLTGDLENNVINAGAGDDTLVGAQGGD-TLIGGYGVDVAD 3358
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGG--------DDLLDLTLIGGVKNYIDLNTESWSSI 253
++ + V + + + +L+G + SI
Sbjct: 3359 YSSSSAGVTVNLANGTGANGHAEGDTLSEIENLTGSAYNDSLVGDDNANVINGGNGHDSI 3418
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + T+ +S+ +G+D V S N+ S+G D +DG +GLD Y A S
Sbjct: 3419 NGGAGDDTLYGGGGNDSITVGTGDDTVYAGSGNDWMTGSTGTDTYDGGTGLDIVNYSASS 3478
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ A + D +E + + + + L
Sbjct: 3479 AAVTV-DLRLGTQAASAGDESGDVYVSIEGIYGSAFDDTFYGNSANNTFYGNGGTDTL-- 3535
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
D+ E + G + S + +D H
Sbjct: 3536 ----DLSEETAAVSSSWATNGWGNVSGTSTGTDSVTGIETYIATDYNDTFSHANAGWAWT 3591
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+ +E + + + G +
Sbjct: 3592 YQLGAGNDTIEAGGGADTIDGGTGTDTASYYNSNAGVTVNLTVSGAQTSSGHAS-----G 3646
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDA---FKALEYIASHEDLINAFADAPDLVQAG 550
D+ + + GA G + L A + L D AG
Sbjct: 3647 DVLSNIENLVGAHEYSNTLTGDASANSLTGGREDDTLSGGAGDDSLFGEDGDDLLTGGAG 3706
Query: 551 KD 552
D
Sbjct: 3707 AD 3708
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 55/338 (16%), Positives = 90/338 (26%), Gaps = 33/338 (9%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+T E S S + R D G G TI
Sbjct: 3136 ITNVENLDGSAFNDTLSGDAGANLIRGLDGGDAINGAAGNDEIEGGDGDDTIDGGADNDS 3195
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ LG +G VYG + + D D + G A
Sbjct: 3196 LDGGLGNDIMDGGDGVDTVYGGEGNDTLDGGAGDDTVIGGLGDDTLSGGGGDDAVSGG-- 3253
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ G D L L ++L T
Sbjct: 3254 --------------------SGADTFYVDAGSDQLDGGEGIDTLSLENETAGV-TLNLGT 3292
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + E + + IE++ GS +D + G+ NNV +G+D G+ G DT
Sbjct: 3293 PANNVGTNVEGDTY----SSIENITGSDHDDHLTGDLENNVINAGAGDDTLVGAQGGDTL 3348
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHK------QDFLSDVERLRFADQCIDSVNVKQRSI 361
+ + V AN D LS++E L + V ++
Sbjct: 3349 IGGYGVDVADYSSSSAGVTVNLANGTGANGHAEGDTLSEIENLTGSAYNDSLVGDDNANV 3408
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ ++ + G D + G D +
Sbjct: 3409 INGGNGHDSINGGAGDDTLYGGGGNDSITVGTGDDTVY 3446
Score = 50.6 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 66/490 (13%), Positives = 128/490 (26%), Gaps = 44/490 (8%)
Query: 34 VLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPR 93
V + ++ ++T A V F++T I S + S
Sbjct: 751 VASNTGVTVNLTIGTGQGGHAAGDTYANLENVTGSAFDDTLIGSTADNVLSGGDGDDYLE 810
Query: 94 YDSRYFMEINFDKADV-------------WRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+D G G+ + + L I + +G +
Sbjct: 811 GGQGADTLSGGAGSDTVSYETANAAVQVDLSTGTATGSDATGDTLSSIENLVGSAYGDEL 870
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK- 199
G + +D + + + D + ++ + D+ G
Sbjct: 871 TGDASDNRFEGGAGDDVLQGGAGADDLIGGAGFDVADYSNSSAVTVDLNISAAQSGGEAE 930
Query: 200 -----------GSLGNNIYKIEVQQK------------DSPFIQTIYDSGGDDLLDLTLI 236
G G++++ + T+ G D + +L
Sbjct: 931 GDTLSDIEGVIGGAGDDVFTGDANDNSFVGGAGNDWARGGGGADTLSGGVGTDTVSYSLS 990
Query: 237 GGVKNYIDLN---TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
T + + ++V G+S ++V G ++
Sbjct: 991 DEGVVLHLDGTASTGGTAEGDQVSGFEVVDGSAHDDTVYGTSADEVFRGAGGDDTLIGGG 1050
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G D F+G +G DT Y + A + + D +ERL +
Sbjct: 1051 GADTFEGGAGTDTVSYETAGSGVSVNLETGAT---GSGDEAGDTFDSIERLLGSVHDDTL 1107
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSYDDLR 412
S+L+ + LI D + G D+ + SY
Sbjct: 1108 TAANAGSVLDGNEGDDTLIGGTSDDTLRGGSRDDTLTGNAGADVLDGGDGIDTVSYSGSS 1167
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
D A A + + G G + + + A + L D G D
Sbjct: 1168 AAVTIDLAADAANDASGGDAAGDDLFNIENVVGSAHDDHLSGDDGDNTLTGGDGDDVLVG 1227
Query: 473 FGCEEGRFVT 482
G + F
Sbjct: 1228 RGGADALFGG 1237
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 89/584 (15%), Positives = 146/584 (25%), Gaps = 37/584 (6%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ Y + D G G T+ + G V
Sbjct: 1469 NVLTGGAGYDTLTGNEGDDQLIGGDGNDTLRGGAGADTLDGGAGSDTADYSTETTAVTID 1528
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ +++ T + + S D G +S + + G
Sbjct: 1529 LDAGTSNTGDTFISIENLTGTSEDDTLTGTDDANTLSGGLGNDVLNGLDGADTLLGG-GG 1587
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
TI G D++D + ++L T S + N+ + +E
Sbjct: 1588 NDVLNGGAGADTIIGGSGIDVVDYSDSSAGV-RVNLETNSNQNGDAEGDNL-----SEVE 1641
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-- 327
S+ GS +D++ G++ N +G DV G +G DT AI V
Sbjct: 1642 SITGSGFDDILTGDAVANTILGGAGADVLVGGNGGDTLDGGDGIDRVDYTSSVAAIEVDL 1701
Query: 328 ----YDANEHKQDFLSDVERLRFA---------DQCIDSVNVKQRSILEYTASYEDLIQV 374
D + D L ++E L + DQ + A + L
Sbjct: 1702 EAGTADGSHATGDTLLNIENLTGSNFNDTLSGDDQNNVIEGGLGDDTIAGEAGADTLEGN 1761
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G DV + +G D S G DL H E
Sbjct: 1762 GGSDVLIGGLGADQLDGGDGNDTASYSGSSAGVVIDLNLAGAQVSAGTEAHGDVLTNIEN 1821
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
F ++I A A L + G DS + +Y D
Sbjct: 1822 ITGSDFDDTLTGDDVANMIRAGAGDDVLDGGLGADTLDGGDGVDLVDYSDSSTAVTAYLD 1881
Query: 495 LRNVF------GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
G + + L A ++ L +
Sbjct: 1882 GVTTGIGGSAQGDTLTDIENLTGSAFHDHLVGNTSANTLTGGAGNDVLEGRGGADTLIGG 1941
Query: 549 AGKDHFSNFGYEEGRSITFNPDLYL------TSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
G D ++ + + ++ V GSD + T G
Sbjct: 1942 TGTDTADYSASNSAVTVNLETGMGTGGDAEGDTLSEIEEVIGSDYNDTLTASTTGSTLYG 2001
Query: 603 RALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
E D +L+ DLY D D
Sbjct: 2002 EDG---DDTLVGGDGNDELHGGSDDDTLTGGAGNDDLYGDAGAD 2042
Score = 41.7 bits (96), Expect = 0.37, Method: Composition-based stats.
Identities = 58/555 (10%), Positives = 116/555 (20%), Gaps = 87/555 (15%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ + V + D G G TI A + LG
Sbjct: 2321 TLTGDSGVNRIEGGAGDDTVFATASNDTLIGGAGTDTISYVAATGSVTVDLGAETASGGG 2380
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G + + ++ + D + + +G
Sbjct: 2381 VGTDSVREFENIVGSANDDTLTGSSLDNTISGGVGNDVIDGAAGDDTLLGEDGDDTLRGG 2440
Query: 202 LGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--Y 256
G + + + G D+ D V ++ T + G
Sbjct: 2441 AGTDTLDGGVGDDTLHGGDGADVLTGGAGTDVADYAGSASVNVNLETGTGTGGQAEGDTL 2500
Query: 257 EKNMTIAQHTVIESVVG---------------------------SSGNDVVIGNSANNVF 289
++ + +++ G +G D + G +
Sbjct: 2501 TGIENVSGGSQDDTLTGDASANVLSGQDGDDTLTGGGGDDHLLGGAGADTLQGGEGADTL 2560
Query: 290 FESSGNDVFDGSSGLDTFF----------------------------------------- 308
GND DG G DT
Sbjct: 2561 EGGEGNDTIDGGEGDDTVLAGGGADTIAGSAGDDDIDAGDGNDTIAGGAGADAIDGGAGF 2620
Query: 309 --YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI----- 361
+ + + + + D LS++E++ + D +
Sbjct: 2621 DHLDYSASTAAVNVAVDGAQIGVGGLAEGDVLSNIEQITGSAYDDDITGSASNDLLLGGD 2680
Query: 362 ----LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L +A + L G+D + D +
Sbjct: 2681 GDDELYGSAGDDTLRGEAGEDTLSGGDGADTLEGGDANDTLQGGAGDDTLDGGSGDDSLE 2740
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
A G + + ++ + DA G ++ +
Sbjct: 2741 GGAGADTITGGAGTDTVSYAGSANGVTVDLANTGAQVSGGDANGDTISGVENILGSSSSD 2800
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
+S + + G+ + G AL A + L
Sbjct: 2801 TLTGDDNSNEIVAGAGNDIVSGGAGDDTLS---GGDGDDTLSGNTGNDALLGGAGVDTLS 2857
Query: 538 NAFADAPDLVQAGKD 552
D AG D
Sbjct: 2858 GDEGDDTLSGGAGDD 2872
Score = 37.8 bits (86), Expect = 6.5, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 72/285 (25%), Gaps = 5/285 (1%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ A+V G G TI + G + V D
Sbjct: 5689 TGSAQGDTLTGDASANVIDGGAGNDTIEGGAGNDTLLGGTGTDTLSYASASGAVTVNLAD 5748
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
ND T + + D G + ++ I G N
Sbjct: 5749 NSNDQGDTISGFENLTGSAHDDTLTGNSSANTITGGAGNDTISGGSGADTVN-AGSGNDT 5807
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
TI D + T S + +++
Sbjct: 5808 VNALGDGDTIDGGADTDTVSYASASTGVT----ATLGGSEDDTISNVENLTGSAHNDTLS 5863
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G + +V+ G + ++ G D +G +G DTF S
Sbjct: 5864 GDASANVISGGAGDDTIDGGGGADTLNGGAGNDTFTLDEGSIDLGATLNGGGDTDTVNFA 5923
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+DV+ + + +D + L+ +A+ + G
Sbjct: 5924 SGAYEAADVDGVLTNVEVLDFTAAGANASLDLSATQIQSMTDAGN 5968
>gi|254501032|ref|ZP_05113183.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
gi|222437103|gb|EEE43782.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Labrenzia alexandrii DFL-11]
Length = 732
Score = 79.1 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/272 (13%), Positives = 75/272 (27%), Gaps = 11/272 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + G+D L G N + + G + ++ +
Sbjct: 353 SGNDILNGGNHNDKLNGNNGNDAL----YGEAGNDEMIGGTGDDMLDGGNGDDSLIGGSG 408
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++++ G GND + G + ++ + +DV G SG DT +N +
Sbjct: 409 VDNLSGGYGNDELKGGAGDDTLDGGNDDDVLVGGSGADTMI-GGYGNDDLKGGADNDTMD 467
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ S + + L + ++L G D F
Sbjct: 468 GGHGDDSLIGGSGDDIMTGGAGADVLKGGSGNDELSGGSHNDELYGGHGDDTFYGDAGND 527
Query: 388 EFGLSEGRDI------TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
G D D + L + G+D + ++ G +
Sbjct: 528 MMHGGRGNDTVDYSAFDVDLSISLHNKKAHGLEIGTDTIKFIDNIVSGGGDDILKGSRDA 587
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ + +D I + A L +
Sbjct: 588 NVIEAGAGDDTIRSLQGADTLTGGEGSDTFVY 619
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 48/344 (13%), Positives = 91/344 (26%), Gaps = 28/344 (8%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV-----VIGNSANNVFFESSG 294
+DLN + G K E + D + N ++
Sbjct: 213 GETVDLNPDGILHTTGVLKADAGTITLGFEDLYNGGDRDFDDSVFTVDIGVQNALVLNAH 272
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
D + D S + +I R +N I+V + S + L + D
Sbjct: 273 YQQDDSGTDPDPSHEGVGSQVVEIERSDNDILVGGDGSDELHGRSGNDDLSGNNGHDDLH 332
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDD 410
L + +DL G D+ H + + G D + + + G+ DD
Sbjct: 333 GGSGDDNLRGNSGEDDLYGNSGNDILNGGNHNDKLNGNNGNDALYGEAGNDEMIGGTGDD 392
Query: 411 LRNVFGSDRGAAARH-----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ + D +G E + L+ + L+ +
Sbjct: 393 MLDGGNGDDSLIGGSGVDNLSGGYGNDELKGGAGDDTLDGGNDDDVLVGGSGADTMIGGY 452
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
G D + +G D G+ G +
Sbjct: 453 GNDDLKGGADNDTMDGGHGDDSLIGGSGDDIMTGGA------------GADVLKGGSGND 500
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
L + +++L D AG D G ++ ++
Sbjct: 501 ELSGGSHNDELYGGHGDDTFYGDAGND--MMHGGRGNDTVDYSA 542
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 34/66 (51%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G +++ T+ + + G G+DV+ GN+ N+ + +G+D+ G++G D +
Sbjct: 3 GTDEDDTLVGTRHSDVMSGRFGDDVMSGNNGNDEVWGGTGDDILYGNNGNDILYGSGGPD 62
Query: 315 LYKIYR 320
L ++
Sbjct: 63 LVEVTG 68
>gi|330977918|gb|EGH77821.1| putative hemolysin-type calcium-binding region [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 781
Score = 79.1 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 82/299 (27%), Gaps = 12/299 (4%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S +D ++G+S N+V G D G G D + + +
Sbjct: 398 HIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTV 457
Query: 330 ANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ +++E L I+ ++++ AS L G D+
Sbjct: 458 VSSVSWTLGANLENLLLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTGGDGSDS 517
Query: 389 FGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRGAAARH---YITHGVKEGRNPDAFKAL 443
+ + + R + ++ +G D + + S A + G +
Sbjct: 518 YYVDDAADRVVETNADAKVGGVDTVYSSLASYTLGANLENIVINSSGAANATGNALDNLI 577
Query: 444 EYIASHEDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
A + + + L ++L +D
Sbjct: 578 YAGAGDNVMDGRGGNDTVSYLFATAGVTVALNTSAQQATGGSGLDTLKGTENLIGSQFAD 637
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
++ T L A + LI + G DH+ G +
Sbjct: 638 TLTGNKNANTLS-----GGAGNDTLSGGAGDDVLIGGSGADTLIGGTGADHYVFNGSSD 691
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 83/283 (29%), Gaps = 23/283 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE N + + S + E + + N
Sbjct: 433 DIYVVDNAFDTVTESNDS-PSQVDTVVSSVSWTLGANLENLLLTGVSAINGTGNAVKNVI 491
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ + AD+ G G + +A +
Sbjct: 492 IGNASNNILDGAAGADMLTGGDGSDSYYVDDAA---------------DRVVETNADAKV 536
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ +S+ SY + + A + + GA G+N+ + +
Sbjct: 537 GGVDTVYSSLASYTLGANLENIVINSSGAANATGNALDNLIYAGA-----GDNVM--DGR 589
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ +G L+ + + ++ G + T+ + ++
Sbjct: 590 GGNDTVSYLFATAGVTVALNTSAQQATGGSGLDTLKGTENLIGSQFADTLTGNKNANTLS 649
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
G +GND + G + ++V SG D G +G D + + S
Sbjct: 650 GGAGNDTLSGGAGDDVLIGGSGADTLIGGTGADHYVFNGSSDT 692
>gi|84499459|ref|ZP_00997747.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
gi|84392603|gb|EAQ04814.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
Length = 780
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 68/425 (16%), Positives = 115/425 (27%), Gaps = 34/425 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + S + + D G G T++ + ++G
Sbjct: 293 GGRDGNDTLTGGSGDDSLSGGSDHDLLYGGGGDDRLFGGSGNDTLIGGPGADRLDGSIG- 351
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ + G S S ++++ A V D A +
Sbjct: 352 --ENWVSYEFATSGARRISLRGSPGEGGESQGDVLLNILNVRGSVHADLFVGDSEANRFT 409
Query: 195 YGAPKG----SLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
GN+ + +I G D + + +N
Sbjct: 410 GLGGDDMIIGEAGNDTLDGGSGDDVINGGAGADSIIGGSGVDTVRYASSSS----VSINL 465
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ +++GG + IE+VVGS D ++GN N +G+D G G DT
Sbjct: 466 AANTAVGGQAEGDVFFG---IENVVGSQEADTIVGNGQPNRIEGLAGDDHIRGGMGADTI 522
Query: 308 FYYAPSYLYKIYRFE-----NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
S +V + D L VERL + V IL
Sbjct: 523 LGREGSDTASYQDSSVGIRIGHFLVGSGGTAEGDRLVQVERLLGSGHDDILVGGGVAPIL 582
Query: 363 EYTASYEDLI---------QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
E + L+ G D + G D + D
Sbjct: 583 EGGGGNDLLMDYGAVAIIRGGNGNDTINAGSGSDTIDGGAGIDTIRYANTSAVQIDLEA- 641
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
G+ G AA I V+ +A L + L + + +G D
Sbjct: 642 --GTGSGFAAEGDIIVNVENVVGSNAADTLTGDGENNRLEGLYGEDTIKGGLGDDVLLGG 699
Query: 474 GCEEG 478
G +
Sbjct: 700 GNADT 704
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 67/243 (27%), Gaps = 20/243 (8%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S +G +++ +++ G SG+D + G S +++ + G+D G SG DT
Sbjct: 278 GRDSFVGTGGTGVSLGGRDGNDTLTGGSGDDSLSGGSDHDLLYGGGGDDRLFGGSGNDTL 337
Query: 308 FYYAPSYLYKIYRFENAIIVYD----------------ANEHKQDFLSDVERLRFADQCI 351
+ EN + E + D L ++ +R +
Sbjct: 338 IGGPGADRLDGSIGENWVSYEFATSGARRISLRGSPGEGGESQGDVLLNILNVRGSVHAD 397
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
V + + + +I G D + G D D +
Sbjct: 398 LFVGDSEANRFTGLGGDDMIIGEAGNDTLDGGSGDDVINGGAGADSIIGGSGV----DTV 453
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
R S G + + + D I + + D
Sbjct: 454 RYASSSSVSINLAANTAVGGQAEGDVFFGIENVVGSQEADTIVGNGQPNRIEGLAGDDHI 513
Query: 472 NFG 474
G
Sbjct: 514 RGG 516
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 50/393 (12%), Positives = 99/393 (25%), Gaps = 33/393 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN----TESWSSIGGYEKNMTIA 263
P + S G++ + I L S + +
Sbjct: 332 SGNDTLIGGPGADRLDGSIGENWVSYEFATSGARRISLRGSPGEGGESQGDVLLNILNVR 391
Query: 264 QHTVIE---------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ G G+D++IG + N+ SG+DV +G +G D+ +
Sbjct: 392 GSVHADLFVGDSEANRFTGLGGDDMIIGEAGNDTLDGGSGDDVINGGAGADSIIGGSGVD 451
Query: 315 LYKIYRFENAIIVY-----DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + I + + D +E + + + V Q + +E A +
Sbjct: 452 TVRYASSSSVSINLAANTAVGGQAEGDVFFGIENVVGSQEADTIVGNGQPNRIEGLAGDD 511
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ +G D + + + +GS G R +
Sbjct: 512 HIRGGMGADTILGREGSDTASYQDSSVGIRIGHFLVGSGGT---AEGDRLVQVERLLGSG 568
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYL 487
LE ++ L++ A A G D + + D+
Sbjct: 569 HDDILVGGGVAPILEGGGGNDLLMDYGAVAIIRGGNGNDTINAGSGSDTIDGGAGIDTIR 628
Query: 488 YL----------GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
Y G ++ LE + + +
Sbjct: 629 YANTSAVQIDLEAGTGSGFAAEGDIIVNVENVVGSNAADTLTGDGENNRLEGLYGEDTIK 688
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
D L D F GR + +
Sbjct: 689 GGLGDDVLLGGGNADTFVFDAVGWGRDLILDWQ 721
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 38/128 (29%), Gaps = 7/128 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
TI G D + V+ IDL + S + +
Sbjct: 605 GNDTINAGSGSDTIDGGAGIDTIRYANTSAVQ--IDLEAGTGSGFAAEGDII-----VNV 657
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+VVGS+ D + G+ NN G D G G D + + +
Sbjct: 658 ENVVGSNAADTLTGDGENNRLEGLYGEDTIKGGLGDDVLLGGGNADTFVFDAVGWGRDLI 717
Query: 329 DANEHKQD 336
+ K D
Sbjct: 718 LDWQDKFD 725
>gi|254560784|ref|YP_003067879.1| hypothetical protein METDI2332 [Methylobacterium extorquens DM4]
gi|254268062|emb|CAX23934.1| conserved hypothetical protein; hemolysin-type calcium-binding
repeat domain [Methylobacterium extorquens DM4]
Length = 751
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 59/189 (31%), Gaps = 12/189 (6%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ G + + L T I + + + V SG+D VI + G
Sbjct: 380 IGGTDGDDLILGTPCADDIAAGAGDDNVDARGGDDLVDAGSGSDHVIAGDGADTVLGGPG 439
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCI 351
+DV +G D + +++ +++ E D L E L D
Sbjct: 440 DDVVFAGAGADRV--SGGAGHDRLFGEAGDDLLF--GEAGDDLLDGGEGRDILDGGDGDD 495
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ + L A +DL G DV EG DI D G+ DL
Sbjct: 496 LLLGGEGNDSLYGAAGADDLSGGTGADVLVGDAGDDRLQGGEGADILSD-----GAGRDL 550
Query: 412 RNVFGSDRG 420
+ D
Sbjct: 551 VSGEAGDDV 559
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/336 (14%), Positives = 90/336 (26%), Gaps = 41/336 (12%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT------ILSHNALHEIGH 130
S + +G+V + + T I + I
Sbjct: 332 SSGTVTADGSGWVFDADAPGPVTITYAVTDGEFSVARTAHLTVLERALIGGTDGDDLI-- 389
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
LG G VD +D S + D G +V
Sbjct: 390 -LGTPCADDIAAGAGDDNVDARGGDDLVDAGSGSDHVIAGDGADTVLGGPGDDVVFAGAG 448
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDL 245
++ G + ++ GDDLLD L GG + + L
Sbjct: 449 ADRVSGGA----------GHDRLFGEAGDDLLFGEAGDDLLDGGEGRDILDGGDGDDLLL 498
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
E S+ G ++ T + +VG +G+D + G ++ + +G D+ G +G D
Sbjct: 499 GGEGNDSLYGAAGADDLSGGTGADVLVGDAGDDRLQGGEGADILSDGAGRDLVSGEAGDD 558
Query: 306 TFFYYAPSYLYKIYRFENAIIV-----------------YDANEHKQDFLSDVERLRFAD 348
S + + A E D ++ VE +
Sbjct: 559 VIILALDSAEDTVDGGAGRDTLDLSAATVDLVVDLRNETVSAQELGLDRITSVEAIIAGS 618
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
V + +L + + + +
Sbjct: 619 GDDRFVVGGRDLVLTGGGGGDVYAFAAPTEPRDGTR 654
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 66/247 (26%), Gaps = 23/247 (9%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV--GSSGNDVVIG 282
S G D + + T +++ G A TV+E + G+ G+D+++G
Sbjct: 332 SSGTVTADGSGWVFDADAPGPVTITYAVTDGEFSVARTAHLTVLERALIGGTDGDDLILG 391
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ +G+D D G D A S + + A V
Sbjct: 392 TPCADDIAAGAGDDNVDARGGDDLV--DAGSGSDHVIAGDGADTVLGGPGDD-------- 441
Query: 343 RLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ FA L A + L G D+ + EGRDI
Sbjct: 442 -VVFAGAGADRVSGGAGHDRLFGEAGDDLLFGEAGDDLLDG---------GEGRDILDGG 491
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
N A G L+ + L +
Sbjct: 492 DGDDLLLGGEGNDSLYGAAGADDLSGGTGADVLVGDAGDDRLQGGEGADILSDGAGRDLV 551
Query: 462 LVQVGKD 468
+ G D
Sbjct: 552 SGEAGDD 558
>gi|254411878|ref|ZP_05025654.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196181600|gb|EDX76588.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 424
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 50/296 (16%), Positives = 86/296 (29%), Gaps = 16/296 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ K T+ G D L GG +N + + I G + N T+
Sbjct: 42 GDDFIKGDQGNDTLVGGNGSDKL----YGGSENDLLFGEDGDDFIRGDQGNDTLLGGFGN 97
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G S ND++ + +++ SG+D+ +G +G D + N +
Sbjct: 98 DKLFGGSENDLLFAHDGDDLLDGGSGDDILNGGAGNDRLLGGIGQGNGTLTYDYNGTTLT 157
Query: 329 D-----ANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
E D L S + L+ D ++ +L + +DL GQD
Sbjct: 158 GINDILNGESGDDTLLGGSGNDVLKGGDDDDTALASFGDDLLLGESGDDDLQGGAGQDTL 217
Query: 381 ESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
E E D+ F + D L G DR G +
Sbjct: 218 EGGAGADNLLGGEQDDLLFAGLSSNPFSTTDNDTLSGGNGDDRLIGDAGNDILVGGIGDD 277
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ + A FG + D+ Y +
Sbjct: 278 ILTGLIGNDVLNGTGGTGAGEVDSLRGDAIGLPSQFFGQDTFVLGDADNVFYAAAG 333
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/289 (11%), Positives = 66/289 (22%), Gaps = 14/289 (4%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A + + G G+D+V+ ++ GND G +G D + S ++ +
Sbjct: 20 AATNSNDVIYGRRGDDLVLAADGDDFIKGDQGNDTLVGGNGSDKLY--GGSENDLLFGED 77
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + D L + +L + L G D+
Sbjct: 78 GDDFI--RGDQGNDTLLGGF------GNDKLFGGSENDLLFAHDGDDLLDGGSGDDILNG 129
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G+ +Y Y G+ N + G + D
Sbjct: 130 GAGNDRLLGGIGQGNGTLTYDYNGTTLTGINDILNGESGDDTLLGGSGNDVLKGGDDDDT 189
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ L+ D G+D + L +
Sbjct: 190 ALASFGDDLLLGESGDDDLQGGAGQDTLEGGAGADNLLGGEQDDLLFAGLSSNPFSTTDN 249
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
+ +G L + L + G
Sbjct: 250 DTLS----GGNGDDRLIGDAGNDILVGGIGDDILTGLIGNDVLNGTGGT 294
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 41/362 (11%), Positives = 93/362 (25%), Gaps = 32/362 (8%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ + D+ G I + G + ++ D D
Sbjct: 57 GGNGSDKLYGGSENDLLFGEDGDDFIRGDQGNDTLLGGFGNDKLFGGSENDLLFAHDGDD 116
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
D + + + G + D G + I
Sbjct: 117 LLDGGSGDDILNGGAGNDRLLGGIGQGNGTLTYDY-------------NGTTLTGINDIL 163
Query: 214 KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T+ G+D+L D T + + + L + G T+
Sbjct: 164 NGESGDDTLLGGSGNDVLKGGDDDDTALASFGDDLLLGESGDDDLQGGAGQDTLEGGAGA 223
Query: 269 ESVVGSSGNDVVI--------GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++++G +D++ + N+ +G+D G +G D +
Sbjct: 224 DNLLGGEQDDLLFAGLSSNPFSTTDNDTLSGGNGDDRLIGDAGNDILV--GGIGDDILTG 281
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ N +V+ LR D + + G +
Sbjct: 282 LIGNDVL---NGTGGTGAGEVDSLR-GDAIGLPSQFFGQDTFVLGDADNVFYAAAGIGDY 337
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
++ F + + +FD G++ + + F + G+ +G
Sbjct: 338 ALIRDFQDGLDKLQVNGSFDYTFAGGAFGGVNSAFVIAINPSDGASEVIGILQGVTSITV 397
Query: 441 KA 442
Sbjct: 398 DP 399
>gi|113476758|ref|YP_722819.1| G-D-S-L family lipolytic protein [Trichodesmium erythraeum IMS101]
gi|110167806|gb|ABG52346.1| lipolytic enzyme, G-D-S-L [Trichodesmium erythraeum IMS101]
Length = 418
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 7/125 (5%)
Query: 483 FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAF 540
FD YL ++ + ++ H+ G E R+P F Y+ ++ + A
Sbjct: 9 FDEQFYLETHPGVAEAVANNIISDGFFHFTRFGQFEDRDPSRIFNTNFYLTTNPGVATAV 68
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+HF NFG E R + N YL Y DL V + A +H++ G
Sbjct: 69 EQNILT---PTEHFINFGQFEQRDPSALLNTSFYLERYPDLAEVVVNTPLTATEHFLNFG 125
Query: 599 MKEGR 603
EGR
Sbjct: 126 QFEGR 130
Score = 68.3 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 7/130 (5%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPD-AFKALEYIASHEDLI 453
D FD YL ++ + ++ + H+ G E R+P F Y+ ++ +
Sbjct: 6 DKLFDEQFYLETHPGVAEAVANNIISDGFFHFTRFGQFEDRDPSRIFNTNFYLTTNPGVA 65
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
A +HF NFG E R + ++ YL Y DL V + A H++
Sbjct: 66 TAVEQNILTPT---EHFINFGQFEQRDPSALLNTSFYLERYPDLAEVVVNTPLTATEHFL 122
Query: 512 THGVKEGRNP 521
G EGR P
Sbjct: 123 NFGQFEGRLP 132
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 55/159 (34%), Gaps = 9/159 (5%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDD 410
+++ V + + HF FG E RD F++ YL +
Sbjct: 4 TIDKLFDEQFYLETHPGVAEAVANNIISDGFFHFTRFGQFEDRDPSRIFNTNFYLTTNPG 63
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ + H+I G E R+P A Y+ + DL + P +H
Sbjct: 64 VATAVEQNILTPTEHFINFGQFEQRDPSALLNTSFYLERYPDLAEVVVNTPLT---ATEH 120
Query: 470 FSNFGCEEGRFVTF---DSYLYLGSYDDLRNVFGSDRGA 505
F NFG EGR D Y++ S D N+ +
Sbjct: 121 FLNFGQFEGRLPRLLFSDIYVFGDSLSDTGNLLAAAENF 159
>gi|300869029|ref|ZP_07113632.1| hypothetical protein OSCI_3890042 [Oscillatoria sp. PCC 6506]
gi|300333009|emb|CBN58826.1| hypothetical protein OSCI_3890042 [Oscillatoria sp. PCC 6506]
Length = 1168
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/253 (16%), Positives = 85/253 (33%), Gaps = 18/253 (7%)
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK--IEVQQKDSPF 218
S+ S + ++ + G + ++ +A I G + IY S
Sbjct: 855 SLSSSNITPNTTDNTLAGSNSDDLLMGNIANDAIDGLAGN---DTIYGMGNNDNLSGSNG 911
Query: 219 IQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
++ + G+D +D T+ GG + + + + G N TI +S+ G
Sbjct: 912 SDVLFGNLGNDYIDGGTDSDTVYGGKDDDAIIGGDGNDLLRGDSANDTIFGGIDSDSIFG 971
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-----YKIYRFENAIIVY 328
ND+++G ++ + + G D G +G D F + L +
Sbjct: 972 GKENDLLLGEDGDDNLYGNLGADTILGGNGNDLVFGNEDADLIFGDIDNDTIYGGKDNDT 1031
Query: 329 DANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D L ++ + + + K IL + + L +G D
Sbjct: 1032 LCGGDGSDLLFGNNNDDLIDGCNGDDTLYGGKGNDILTGGSGNDFLSGDLGDDTLTGGSG 1091
Query: 386 FYEFGLSEGRDIT 398
F L+ G+ I
Sbjct: 1092 NDVFLLTSGQGID 1104
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ D TL G + + + + +I G N TI +++ GS+G+DV+ GN N+
Sbjct: 864 NTTDNTLAGSNSDDLLMGNIANDAIDGLAGNDTIYGMGNNDNLSGSNGSDVLFGNLGNDY 923
Query: 289 FFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLS-D 340
+ +D G D S I+ ++ ++ E+
Sbjct: 924 IDGGTDSDTVYGGKDDDAIIGGDGNDLLRGDSANDTIFGGIDSDSIFGGKENDLLLGEDG 983
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ L + ++ + + I D K +G D+ F
Sbjct: 984 DDNLYGNLGADTILGGNGNDLVFGNEDADLIFGDIDNDTIYGGKDNDTLCGGDGSDLLFG 1043
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+ + DDL + D Y G L + L +
Sbjct: 1044 N-----NNDDLIDGCNGDDTL----YGGKGNDILTGGSGNDFLSGDLGDDTLTGGSGNDV 1094
Query: 461 DLVQVG 466
L+ G
Sbjct: 1095 FLLTSG 1100
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 64/229 (27%), Gaps = 8/229 (3%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSY 314
I +T ++ GS+ +D+++GN AN+ +GND G D +
Sbjct: 861 ITPNTTDNTLAGSNSDDLLMGNIANDAIDGLAGNDTIYGMGNNDNLSGSNGSDVLFGNLG 920
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQ 373
I ++ VY + D L D D++ + + L+
Sbjct: 921 NDYIDGGTDSDTVYGGKDDDAIIGGDGNDLLRGDSANDTIFGGIDSDSIFGGKENDLLLG 980
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D G D+ F + + D+ N G
Sbjct: 981 EDGDDNLYGNLGADTILGGNGNDLVFGNEDADLIFGDIDNDTIYGGKDNDTLCGGDGSDL 1040
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ ++ + L + G D S ++
Sbjct: 1041 LFGNNNDDLIDGCNGDDTLYGGKGNDILTGGSGNDFLSGDLGDDTLTGG 1089
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 68/255 (26%), Gaps = 17/255 (6%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
T + +DV +G I + G
Sbjct: 884 ANDAIDGLAGNDTIYGMGNNDNLSGSNGSDVLFGNLGNDYIDGGTDSDTVY---GGKDDD 940
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+ GG + D ND+ F DS + D
Sbjct: 941 AIIGGDGNDLLRGDSANDTI-------FGGIDSDSIFGGKENDLLLGEDGDDNLYGNLGA 993
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
LG N + I+ +D + GG N + + G
Sbjct: 994 DTILGGN---GNDLVFGNEDADLIFGDIDNDTI----YGGKDNDTLCGGDGSDLLFGNNN 1046
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ I +++ G GND++ G S N+ G+D G SG D F + + I
Sbjct: 1047 DDLIDGCNGDDTLYGGKGNDILTGGSGNDFLSGDLGDDTLTGGSGNDVFLLTSGQGIDII 1106
Query: 319 YRFENAIIVYDANEH 333
F+ + +
Sbjct: 1107 MDFQKGQDLIGLSGE 1121
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/240 (15%), Positives = 74/240 (30%), Gaps = 13/240 (5%)
Query: 106 KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
+ T+ N+ + + G +YG+ N+ S + +
Sbjct: 857 SSSNITPNTTDNTLAGSNSDDLLMGNIANDAIDGLAGNDTIYGMGNNDNLSGSNGSDVLF 916
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
+ +D D A+ G G++ +I+
Sbjct: 917 GNLGNDYIDGGTDSDTVYGGKDDDAIIGGDG-NDLLRGDSA---NDTIFGGIDSDSIFGG 972
Query: 226 GGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+DLL D L G + L + G E I +++ G ND +
Sbjct: 973 KENDLLLGEDGDDNLYGNLGADTILGGNGNDLVFGNEDADLIFGDIDNDTIYGGKDNDTL 1032
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G +++ F ++ +D+ DG +G DT + + + + + D L+
Sbjct: 1033 CGGDGSDLLFGNNNDDLIDGCNGDDTLY--GGKGNDILTGGSGND--FLSGDLGDDTLTG 1088
>gi|302875676|ref|YP_003844309.1| calcium binding hemolysin protein, putative [Clostridium
cellulovorans 743B]
gi|307688114|ref|ZP_07630560.1| calcium binding hemolysin protein, putative [Clostridium
cellulovorans 743B]
gi|302578533|gb|ADL52545.1| calcium binding hemolysin protein, putative [Clostridium
cellulovorans 743B]
Length = 3083
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 67/457 (14%), Positives = 127/457 (27%), Gaps = 75/457 (16%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E I + NG + + + D + G G +L N +
Sbjct: 748 EILGGDGIDSLFGGNG-NDSLDGGNGNDSLYGEEGNDTIQGGTGVDNLLGGNGNDNLDGG 806
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
LG G ++ S + + D + +
Sbjct: 807 LGNDTLDGNAGNDVYVFGIGSGKDTINNYDETSAYTDIIKLKDGITLKDVKATRVNNNDL 866
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-DLTLIGGVKNYIDLNTESW 250
+ + A ++ Y I K S ++ L +L L G + + +
Sbjct: 867 EILIVASGDTVTIKDYFISDFYKVDRIEFADGTSLDNETLRNLPLYGTEDGETLIGSPNK 926
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
SI G+ N TI +++ G GND + G + N++ G+D DG G DT+ +
Sbjct: 927 ESIFGFGGNDTIYGQAGEDTIYGGKGNDNIYGGNNNDIIDGEEGDDYLDGGEGNDTYIFR 986
Query: 311 APSYLYKIYRFEN--------------------------AIIVYDANEHKQDFLSD---- 340
S I + +I+ + F+ +
Sbjct: 987 IGSGKDIINECDATSGNIDTLKFEEGISQSSLDFRRENRNLIITIDGIEDRVFIRNYFLP 1046
Query: 341 ---VERLRFADQCIDS------------------------------------VNVKQRSI 361
+E++ FAD + +
Sbjct: 1047 ESKIEKIEFADGSVLDNEILSKLIIYGTIDGDEINSDNVDEVIKALEGADIINSFGGTDK 1106
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + + + G DV + EG D+ + + DDL G+D
Sbjct: 1107 INGGSGNDVIDAGAGDDVVYGDEGNDNIKGQEGNDLIYGNSGV----DDLYGGIGNDTLD 1162
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
T EG + F++ + + D N +
Sbjct: 1163 GGEDNDTLSGGEGEDIYIFRSGSGVDTINDKGNTVGN 1199
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 77/559 (13%), Positives = 141/559 (25%), Gaps = 79/559 (14%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
I ++ G S + DV G I I G+
Sbjct: 1097 IINSFGGTDKINGGSGNDVIDAGAGDDVVYGDEGNDNIKGQEGNDLIYGNSGVDDLYGG- 1155
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI--------VAVQK 193
G D + S Y S +D T DI
Sbjct: 1156 IGNDTLDGGEDNDTLSGGEGEDIYIFRSGSGVDTINDKGNTVGNIDILKFETGITAENIS 1215
Query: 194 IYGAPKG------SLGNNIYKIEVQQKDSPFIQTIYDSG--------------GDDLLDL 233
+ + + + + + + + + G G + +D+
Sbjct: 1216 LRRVNRDLVITIKNTTDQVKIVNQFLPNVKIERIEFADGSVLDNAELDKLPIFGTEGIDV 1275
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
V ID + +I + I + + +G D V G+ N+ + +
Sbjct: 1276 INTDDVGEVIDALEGA-DTINSMGGDDYINGREGDDVIKSGNGKDQVFGDEGNDFIYGGA 1334
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQC 350
GND DG SG D F A + D E + D
Sbjct: 1335 GNDELDGGSGNDNIF-------------GEAGVDTLKGGLGDDTFEGGEDADIIYGEDGV 1381
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF---------------YEFGLSEGR 395
+ ++ A + L+ +G D + L EG
Sbjct: 1382 DTIYGQQGNDTIDGGAGNDILLGGVGDDTYIFNIGSGIDTITDIDDTVNNIDTVKLGEGI 1441
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL----EYIASHED 451
Y+ + + ++ G+D ++Y + + + +
Sbjct: 1442 TDKNIKYIRDLNNNLQISIEGTDDKFIIKNYYVNDANKVEKIEFANGQTIDNSILRELPI 1501
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
AD + +D F G ++ + +Y G+ D N
Sbjct: 1502 YGTENADIINATDNKEDIFGYGGDDQINSFDGEDTIYGGNGIDTINAGK----------- 1550
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
G E D L + ++ L G D + FG G+ + D
Sbjct: 1551 --GNDELYGEDGNDTLNGLEGNDRLDGGLGVDSLNGGLGNDTYI-FGIGYGKDTILDIDA 1607
Query: 572 YLTSYDDLWNVFGSDRSAA 590
+ D + G
Sbjct: 1608 SEDNIDTIILSEGISVENL 1626
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 74/530 (13%), Positives = 146/530 (27%), Gaps = 66/530 (12%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D + + T D D G + + + LG
Sbjct: 1532 DGEDTIYGGNGIDTINAGKGNDELYGEDGNDTLNGLEGNDRLDGGLGVDSLNGGLGNDTY 1591
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA--VQKIY 195
G +D D D+ T ++S + +++ + + Y
Sbjct: 1592 IFGIGYGKDTILDIDASEDNIDTIILSEGISVENLELKRVLNNLELSIKGTEDKLIITNY 1651
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
NI + D+ I+T+ D G +++D I
Sbjct: 1652 YFSDSYKIENIKFANGELYDNEKIKTL-DIYGTEIVDEINTTDESEVI----------KA 1700
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ +I + +++ GND +I N+V + GND +G +G DT+ + S +
Sbjct: 1701 LAGSDSINSYGGNDTIFAGLGNDTIIAGDGNDVLYGEEGNDTLNGGAGSDTYVFSLGSGV 1760
Query: 316 YKIYRFE--------------------------NAIIVYDANEHKQDFLSD-------VE 342
I ++ N +++ + + + +E
Sbjct: 1761 DTINNYDTSSNNIDTIKLLEGITEDKLIIKRILNDLVITIDGTTDKITVKNNFLANNGIE 1820
Query: 343 RLRFADQCI---------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
++ A+ I D + I++ +S E ++ + G+D + E
Sbjct: 1821 KIELANGVIFDSEAINKLDINGTENDDIIKGESSPETILGLAGKDQLYGNGGIDKLYGGE 1880
Query: 394 GRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G D + D D L G+D T+ G D + A+
Sbjct: 1881 GNDTLYGGVDNDELYGQSDDDTLDGGEGNDTLDGDIGSDTYIFTIGSGQDIITDYDLNAN 1940
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSD---- 502
+ D I + V + +L Y F D
Sbjct: 1941 NSDTIKLGQGITEENIVVSRVNKDLVITITGTTDKLTIKNYFLEGYKIESIKFFDDKILT 2000
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
Y T G + + + ++ + AG D
Sbjct: 2001 INDNLSIYGTEGDDTFQGDSINETYIGLGGNDSIYGNQGKDNLHGNAGND 2050
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 51/306 (16%), Positives = 84/306 (27%), Gaps = 72/306 (23%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
+++ D+ P + V IYG + +
Sbjct: 685 GYTENNFGDSWISPNHLPALVGTDKVDYIYGGN----------GDEPIYAGAGDDHVDGE 734
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D L G N L + S+ G N ++ +S+ G GND + G +
Sbjct: 735 EGTDTL----YGQDGNDEILGGDGIDSLFGGNGNDSLDGGNGNDSLYGEEGNDTIQGGTG 790
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE------------- 332
+ +GND DG G DT A + +Y + + +E
Sbjct: 791 VDNLLGGNGNDNLDGGLGNDTLDGNAGNDVYVFGIGSGKDTINNYDETSAYTDIIKLKDG 850
Query: 333 ---------------------HKQDFLS----------DVERLRFADQCIDSVNVKQRSI 361
D ++ V+R+ FAD +
Sbjct: 851 ITLKDVKATRVNNNDLEILIVASGDTVTIKDYFISDFYKVDRIEFADGTSLDNETLRNLP 910
Query: 362 LEYTASYEDLIQV---------IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
L T E LI G D +G D +Y G+ +D+
Sbjct: 911 LYGTEDGETLIGSPNKESIFGFGGNDTIYGQAGEDTIYGGKGND-----NIYGGNNNDII 965
Query: 413 NVFGSD 418
+ D
Sbjct: 966 DGEEGD 971
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 59/553 (10%), Positives = 124/553 (22%), Gaps = 88/553 (15%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ + D G+ + + + G G
Sbjct: 1869 GNGGIDKLYGGEGNDTLYGGVDNDELYGQSDDDTLDGGEGNDTLDGDIGSDTYIFTIGSG 1928
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN-------- 205
++ + + + + V I G N
Sbjct: 1929 QDIITDYDLNANNSDTIKLGQGITEENIVVSRVNKDLVITITGTTDKLTIKNYFLEGYKI 1988
Query: 206 --IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I + + +IY + GDD + YI L SI G + +
Sbjct: 1989 ESIKFFDDKILTINDNLSIYGTEGDDT--FQGDSINETYIGL--GGNDSIYGNQGKDNLH 2044
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ +S+ G G D + G+ + +G+D G G DT+ + I F+
Sbjct: 2045 GNAGNDSIYGGDGIDNLYGDEGIDTLDGGAGDDNLYGGVGNDTYVFGLGYGEDIINDFDT 2104
Query: 324 AIIVYDANEHK------------------------QDFLS----------DVERLRFADQ 349
D D L+ +E+ D
Sbjct: 2105 EEGNIDTLRFGEGIKEEDIIFNRSDYDLEITIEGQNDKLTIVGYYKNDGYRIEKFELFDG 2164
Query: 350 CI---------------------------DSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + + + + + G D
Sbjct: 2165 TVIGSEKPDSIILYGTDGPDIVKGGDVSDIIMALAEDDTVYGEGGNDIIDGGAGNDTLYG 2224
Query: 383 MKHFYEFGL--SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK---EGRNP 437
+ G+D + +G+ D ++ G + + ++ G +
Sbjct: 2225 GVGNDTYIFQIGSGKDTIIEDDKTIGNIDVVKFGAGITSQNLEFSRVDNNLEVTILGTSD 2284
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDH----FSNFGCEEGRFVTFDSYLYLGSYD 493
+ + + D ++ K + G + +
Sbjct: 2285 KLVIKDYFKNENNKIEKFVLDNDTVISSDKYDTLALYGTSGDDVLEAGDCKDTVMALEGG 2344
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
D+ G D A G L + L + G D
Sbjct: 2345 DVIYGLGGDDTINAAG----GKDTLYGGTGSDVLNGEEGDDILNGQVGNDTLTGGNGNDI 2400
Query: 554 FSNFGYEEGRSIT 566
+ +I
Sbjct: 2401 YQFEIGSGTDTIN 2413
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/316 (13%), Positives = 84/316 (26%), Gaps = 43/316 (13%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
T+ I G + I + V G G D + G N+ G D G +G D
Sbjct: 706 GTDKVDYIYGGNGDEPIYAGAGDDHVDGEEGTDTLYGQDGNDEILGGDGIDSLFGGNGND 765
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + +Y E + + V+ L + + L+
Sbjct: 766 SL--DGGNGNDSLYGEEGNDTIQGG--------TGVDNLLGGNGNDNLDGGLGNDTLDGN 815
Query: 366 ASYEDLIQVIG------QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
A + + IG + E+ + L +G + + + D + S
Sbjct: 816 AGNDVYVFGIGSGKDTINNYDETSAYTDIIKLKDGITLKDVKATRVNNNDLEILIVASGD 875
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ Y + + FAD L + +G E+G
Sbjct: 876 TVTIKDYFISDFYKVDRIE-----------------FADGTSLDNETLRNLPLYGTEDGE 918
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
L + ++FG Y G + +++ +
Sbjct: 919 --------TLIGSPNKESIFGFGGNDTI--YGQAGEDTIYGGKGNDNIYGGNNNDIIDGE 968
Query: 540 FADAPDLVQAGKDHFS 555
D G D +
Sbjct: 969 EGDDYLDGGEGNDTYI 984
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/387 (14%), Positives = 103/387 (26%), Gaps = 52/387 (13%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ ++ D G+G TI++ + + G G +
Sbjct: 1702 AGSDSINSYGGNDTIFAGLGNDTIIAGDGNDVLYGEEGNDTLNGGAGSDTYVFSLGSGVD 1761
Query: 156 DSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK 214
S + +++ + + + + + K ++ NN +K
Sbjct: 1762 TINNYDTSSNNIDTIKLLEGITEDKLIIKRILNDLVITIDGTTDKITVKNNFLANNGIEK 1821
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
I+DS + LD + G + I S +I G + + I+ + G
Sbjct: 1822 IELANGVIFDSEAINKLD--INGTENDDIIKGESSPETILGLAGKDQLYGNGGIDKLYGG 1879
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA--NE 332
GND + G N+ + S +D DG G DT S Y I+ D N
Sbjct: 1880 EGNDTLYGGVDNDELYGQSDDDTLDGGEGNDTLDGDIGSDTYIFTIGSGQDIITDYDLNA 1939
Query: 333 HKQDFLS----------------------------------------DVERLRFADQCI- 351
+ D + +E ++F D I
Sbjct: 1940 NNSDTIKLGQGITEENIVVSRVNKDLVITITGTTDKLTIKNYFLEGYKIESIKFFDDKIL 1999
Query: 352 ------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ + + E I + G D + + G D +
Sbjct: 2000 TINDNLSIYGTEGDDTFQGDSINETYIGLGGNDSIYGNQGKDNLHGNAGNDSIYGGDGID 2059
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVK 432
Y D Y G
Sbjct: 2060 NLYGDEGIDTLDGGAGDDNLYGGVGND 2086
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 56/399 (14%), Positives = 105/399 (26%), Gaps = 14/399 (3%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ D G G +L +G +
Sbjct: 1365 TFEGGEDADIIYGEDGVDTIYGQQGNDTIDGGAGNDILLGGVGDDTYIFNIGSGIDTITD 1424
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
V +D + + Y ++ + S D + K Y +
Sbjct: 1425 IDDTVNNIDTVKLGEGITDKNIKYIRDLNNNLQISIEGT------DDKFIIKNYYVNDAN 1478
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
I Q D+ ++ + G + D+ K I I ++ T
Sbjct: 1479 KVEKIEFANGQTIDNSILREL-PIYGTENADIINATDNKEDI-FGYGGDDQINSFDGEDT 1536
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I I+++ GND + G N+ GND DG G+D+ + Y
Sbjct: 1537 IYGGNGIDTINAGKGNDELYGEDGNDTLNGLEGNDRLDGGLGVDSLNGGLGNDTYIFGIG 1596
Query: 322 ENAIIV--YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ DA+E D + E + + + V ++ T + D
Sbjct: 1597 YGKDTILDIDASEDNIDTIILSEGISVENLELKRVLNNLELSIKGTEDKLIITNYYFSDS 1656
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
++ + G + +Y D N A G N
Sbjct: 1657 YKIENIKFANGELYDNEKIKTLDIYGTEIVDEINTTDESEVIKALAGSDSINSYGGNDTI 1716
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
F L ++ +I + + G D + +
Sbjct: 1717 FAGL----GNDTIIAGDGNDVLYGEEGNDTLNGGAGSDT 1751
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 67/474 (14%), Positives = 125/474 (26%), Gaps = 39/474 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
D D+ G G I + E+ G G
Sbjct: 2500 GTSNGDIILGDIGADNLFGNGGDDILYGGAGDDKINGGDGKDELNGEEGNDSLYGGTGND 2559
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
++ + S +D + ++ +I G+ +
Sbjct: 2560 TYVFRKGFGQDTITDYDATRGNIDTISFVDGITKDDIELVRTNTTLEIRIKGSEDRITVS 2619
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
Y + I+ I G ++ D I+ ++ G I
Sbjct: 2620 QHYSTNGNNR----IERIIFEDGSEITDFISNVTFYGTIN-----DDTLDGDSNKNIIKA 2670
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++V G + +D + G S + +GND G SG+D + + Y +
Sbjct: 2671 LEGADTVNGGANDDEIYGGSDGDFLNGQTGNDYIYGESGVDQLYGEEGND----YLYGGE 2726
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ DFL E L ++L G D + K
Sbjct: 2727 DEDFLYGGDDNDFLYGGEG------NDGLDGGNGNDTLSGDGGDDNLSDSSGSDTYVFDK 2780
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA--FK 441
+ G+D D G+ D ++ ++ + + +++ N
Sbjct: 2781 GY-------GKDTITDYDEIEGNTDTIKFGESINKADISYKRILSNLEITFGNDADKLTI 2833
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
A Y+ +++ + FAD L G +E + D +N
Sbjct: 2834 ADYYVNTNKVEVIQFADNSILDNQILSSLDINGTKEKDTIE----------GDSQNNVIY 2883
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G D AL ++ L D AG D +
Sbjct: 2884 GFEGIDELKGNAGNDTLYGGDGNDALYGGDGNDKLYGEAGDDVLEGGAGDDTYV 2937
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 65/491 (13%), Positives = 121/491 (24%), Gaps = 98/491 (19%)
Query: 199 KGSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+++ K + Q IY G+D LD GG N ++ G
Sbjct: 1304 NGREGDDVIKSGNGKDQVFGDEGNDFIYGGAGNDELD----GGSGNDNIFGEAGVDTLKG 1359
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ T + + G G D + G N+ +GND+ G G DT+ + S +
Sbjct: 1360 GLGDDTFEGGEDADIIYGEDGVDTIYGQQGNDTIDGGAGNDILLGGVGDDTYIFNIGSGI 1419
Query: 316 YK---------------------------IYRFENAIIVYDANEHKQDFLSD-------- 340
I N + + + + +
Sbjct: 1420 DTITDIDDTVNNIDTVKLGEGITDKNIKYIRDLNNNLQISIEGTDDKFIIKNYYVNDANK 1479
Query: 341 VERLRFADQCI---------------------------DSVNVKQRSILEYTASYEDLIQ 373
VE++ FA+ D + + +
Sbjct: 1480 VEKIEFANGQTIDNSILRELPIYGTENADIINATDNKEDIFGYGGDDQINSFDGEDTIYG 1539
Query: 374 VIGQDVFESMKHFYEFGLSEGRDIT-----FDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
G D + K E +G D D D L G+D Y
Sbjct: 1540 GNGIDTINAGKGNDELYGEDGNDTLNGLEGNDRLDGGLGVDSLNGGLGNDTYIFGIGYGK 1599
Query: 429 HG-----VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC-------- 475
E + + +L + ++ +D
Sbjct: 1600 DTILDIDASEDNIDTIILSEGISVENLELKRVLNNLELSIKGTEDKLIITNYYFSDSYKI 1659
Query: 476 -----EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
G + L Y + + G + +
Sbjct: 1660 ENIKFANGELYDNEKIKTLDIYGTEIVDEINTTDESEVIKALAGSDSINSYGGNDTIFAG 1719
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
++ +I + + G D + G + F+ L S D N + + +
Sbjct: 1720 LGNDTIIAGDGNDVLYGEEGND--TLNGGAGSDTYVFS----LGSGVDTINNYDTSSNNI 1773
Query: 591 AQHYITHGMKE 601
+ G+ E
Sbjct: 1774 DTIKLLEGITE 1784
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 66/529 (12%), Positives = 123/529 (23%), Gaps = 86/529 (16%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
T + + D G+G T + +G +
Sbjct: 2199 AEDDTVYGEGGNDIIDGGAGNDTLYGGVGNDTYIFQIG----------------SGKDTI 2242
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
D N + T + + V K Y + +
Sbjct: 2243 IEDDKTIGNIDVVKFGAGITSQNLEFSRVDNNLEVTILGTSDKLVIKDYFKNENNKIEKF 2302
Query: 207 YKIEVQQKDSPFIQTI--YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
S T+ Y + GDD+L+ G + E I G + TI
Sbjct: 2303 VLDNDTVISSDKYDTLALYGTSGDDVLE----AGDCKDTVMALEGGDVIYGLGGDDTINA 2358
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G +G+DV+ G +++ GND G +G D + + S I + +A
Sbjct: 2359 AGGKDTLYGGTGSDVLNGEEGDDILNGQVGNDTLTGGNGNDIYQFEIGSGTDTINNYSDA 2418
Query: 325 IIVYDANEHKQDFLSD----------------------------------VERLRFADQC 350
D E D + ++F D
Sbjct: 2419 ASDIDTIEFGDRISKDKLSFTRIGNDLQIIILGTNDRLNIKNYYLSDSYKINAMKFKDGT 2478
Query: 351 I--------------------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + L + L G D
Sbjct: 2479 VWGEKEIAAQIESRPTIIGKPGTSNGDIILGDIGADNLFGNGGDDILYGGAGDDKINGGD 2538
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
E EG D + R FG D + K
Sbjct: 2539 GKDELNGEEGNDSLYGGTG--NDTYVFRKGFGQDTITDYDATRGNIDTISFVDGITKDDI 2596
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ + + H+S G + F+ + + +G+
Sbjct: 2597 ELVRTNTTLEIRIKGSEDRITVSQHYSTNGNNRIERIIFEDGSEITDFISNVTFYGTIND 2656
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ + + A+ +++ Q G D+
Sbjct: 2657 DTLD--GDSNKNIIKALEGADTVNGGANDDEIYGGSDGDFLNGQTGNDY 2703
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 52/355 (14%), Positives = 92/355 (25%), Gaps = 56/355 (15%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
I++ IYG G N+ ++ K I GG D + G + ID
Sbjct: 1065 ILSKLIIYGTIDGDEINSD-NVDEVIKALEGADIINSFGGTDKI---NGGSGNDVIDAGA 1120
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G E N I + + G+SG D + G N+ ND G G D +
Sbjct: 1121 G-DDVVYGDEGNDNIKGQEGNDLIYGNSGVDDLYGGIGNDTLDGGEDNDTLSGGEGEDIY 1179
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--------------------------- 340
+ + S + I N + D + + ++
Sbjct: 1180 IFRSGSGVDTINDKGNTVGNIDILKFETGITAENISLRRVNRDLVITIKNTTDQVKIVNQ 1239
Query: 341 ------VERLRFADQCIDSVNVK------------------QRSILEYTASYEDLIQVIG 376
+ER+ FAD + +++ + + + G
Sbjct: 1240 FLPNVKIERIEFADGSVLDNAELDKLPIFGTEGIDVINTDDVGEVIDALEGADTINSMGG 1299
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + G+D F Y N + GV +
Sbjct: 1300 DDYINGREGDDVIKSGNGKDQVFGDEGNDFIYGGAGNDELDGGSGNDNIFGEAGVDTLKG 1359
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
E + + Q G D + Y+ +
Sbjct: 1360 GLGDDTFEGGEDADIIYGEDGVDTIYGQQGNDTIDGGAGNDILLGGVGDDTYIFN 1414
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/241 (15%), Positives = 68/241 (28%), Gaps = 1/241 (0%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
D D G G + N + G S + G Y
Sbjct: 2719 NDYLYGGEDEDFLYGGDDNDFLYGGEGNDGLDGGNGNDTLS-GDGGDDNLSDSSGSDTYV 2777
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
D Y D+ S + ++ +G L Y
Sbjct: 2778 FDKGYGKDTITDYDEIEGNTDTIKFGESINKADISYKRILSNLEITFGNDADKLTIADYY 2837
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + + L L + G + + I G+E + +
Sbjct: 2838 VNTNKVEVIQFADNSILDNQILSSLDINGTKEKDTIEGDSQNNVIYGFEGIDELKGNAGN 2897
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G GND + G N+ + +G+DV +G +G DT+ + + I A
Sbjct: 2898 DTLYGGDGNDALYGGDGNDKLYGEAGDDVLEGGAGDDTYVFGINCGVDVISSSTGADTGT 2957
Query: 329 D 329
D
Sbjct: 2958 D 2958
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 53/420 (12%), Positives = 106/420 (25%), Gaps = 81/420 (19%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
I + D G G T + + G+ +
Sbjct: 2524 ILYGGAGDDKINGGDGKDELNGEEGNDSLYGGTGNDTYVFRKGFGQDTITDYDATRGNID 2583
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
V G+ D + + + + +T + I + G+
Sbjct: 2584 TISFVDGITKDDIELVRTNTTLEIRIKGSEDRITVSQHYSTNGNNRIERIIFEDGSEITD 2643
Query: 202 LGNNIYKI----EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+N+ + I G D + G + I ++ + G
Sbjct: 2644 FISNVTFYGTINDDTLDGDSNKNIIKALEGADTV---NGGANDDEIYGGSDG-DFLNGQT 2699
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN------------------DVFD 299
N I + ++ + G GND + G + + N D
Sbjct: 2700 GNDYIYGESGVDQLYGEEGNDYLYGGEDEDFLYGGDDNDFLYGGEGNDGLDGGNGNDTLS 2759
Query: 300 GSSGL---------DTFFYYAPSYLYKIYRFE--------------------------NA 324
G G DT+ + I ++ +
Sbjct: 2760 GDGGDDNLSDSSGSDTYVFDKGYGKDTITDYDEIEGNTDTIKFGESINKADISYKRILSN 2819
Query: 325 IIVYDANEHKQDFLSD-------VERLRFADQCI---------DSVNVKQRSILEYTASY 368
+ + N+ + ++D VE ++FAD I D K++ +E +
Sbjct: 2820 LEITFGNDADKLTIADYYVNTNKVEVIQFADNSILDNQILSSLDINGTKEKDTIEGDSQN 2879
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAAR 424
+ G D + +G D + + LY + DD+ D
Sbjct: 2880 NVIYGFEGIDELKGNAGNDTLYGGDGNDALYGGDGNDKLYGEAGDDVLEGGAGDDTYVFG 2939
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/377 (12%), Positives = 91/377 (24%), Gaps = 76/377 (20%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
N + + D G G + LG +
Sbjct: 2045 GNAGNDSIYGGDGIDNLYGDEGIDTLDGGAGDDNLYGGVGNDTYVFGLGYGEDIINDFDT 2104
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+D + + +
Sbjct: 2105 EEGNIDTLRFGEGIKEEDIIFNRSD----------------------------------- 2129
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI-GGYEKNMTIA 263
Y +E+ + TI +D + + + + S I G + +
Sbjct: 2130 --YDLEITIEGQNDKLTIVGYYKNDGYRIEKFELFDGTVIGSEKPDSIILYGTDGPDIVK 2187
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
V + ++ + +D V G N++ +GND G G DT+ + S I +
Sbjct: 2188 GGDVSDIIMALAEDDTVYGEGGNDIIDGGAGNDTLYGGVGNDTYIFQIGSGKDTIIEDDK 2247
Query: 324 AIIVYDANEHKQ------------------------------DFLSD----VERLRFADQ 349
I D + D+ + +E+ +
Sbjct: 2248 TIGNIDVVKFGAGITSQNLEFSRVDNNLEVTILGTSDKLVIKDYFKNENNKIEKFVLDND 2307
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYL 405
+ S + L T+ + L +D +++ G D LY
Sbjct: 2308 TVISSDKYDTLALYGTSGDDVLEAGDCKDTVMALEGGDVIYGLGGDDTINAAGGKDTLYG 2367
Query: 406 GSYDDLRNVFGSDRGAA 422
G+ D+ N D
Sbjct: 2368 GTGSDVLNGEEGDDILN 2384
Score = 42.1 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 25/63 (39%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
VG+ ND + G+ +++ GND G G DT+ Y +I + D
Sbjct: 4 VGNDSNDNLTGSINDDILDGKKGNDSLYGGRGNDTYIYNLGDGKDRITDNDPTADNVDTI 63
Query: 332 EHK 334
+
Sbjct: 64 KFG 66
Score = 37.5 bits (85), Expect = 7.0, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 271 VVGSSGNDVVIGNS--ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+G+ G+D ++ N+ N +GND +G G DT+ + I +++
Sbjct: 145 AIGTPGDDNIVPNNQNGENFIDPLAGNDKMNGGKGNDTYIFGVGYGTDVIEDYDDT 200
>gi|325134366|gb|EGC57011.1| Iron-regulated protein frpA [Neisseria meningitidis M13399]
Length = 793
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/260 (17%), Positives = 87/260 (33%), Gaps = 15/260 (5%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 429 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 488
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYEN-----DSFLTSVMSYFMPQDSMMDASFGYCATPM- 184
+ + + ++ DS +V SYF S
Sbjct: 489 KDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 548
Query: 185 VSDIVAVQKIYGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
V D+ V+++ + + G++ Y+ +Y + GDDLL+ G N
Sbjct: 549 VLDVATVKEL--VQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGN 602
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ ++ G E N + + + + G GND + G N+ +GND +G
Sbjct: 603 DSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGG 662
Query: 302 SGLDTFFYYAPSYLYKIYRF 321
SG DT+ + +Y +
Sbjct: 663 SGSDTYVFGKGFGQDTVYNY 682
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/288 (15%), Positives = 80/288 (27%), Gaps = 60/288 (20%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 434 GHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 493
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV- 354
+ V ++ ++ + F + + V
Sbjct: 494 FTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 553
Query: 355 --------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L S L +G D G D +Y G
Sbjct: 554 TVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLNGDAGND-----SIYSG 608
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ +D N + Y +G + L ++ LI + G
Sbjct: 609 NGNDTLNGGEGNDAL----YGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 664
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
D + FG G+ ++ ++ D AA H+I G
Sbjct: 665 SDTYV-FGKGFGQDTVYN--YHVDKNSDTM--HFKGFKAADVHFIRSG 707
>gi|307152381|ref|YP_003887765.1| LVIVD repeat-containing protein [Cyanothece sp. PCC 7822]
gi|306982609|gb|ADN14490.1| LVIVD repeat protein [Cyanothece sp. PCC 7822]
Length = 1290
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 68/184 (36%), Gaps = 15/184 (8%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN+ YK V + + +GG D LD + V ++L T + ++ +T+
Sbjct: 1054 GNDSYKYSVISQLGSDTISETATGGTDTLDFSG-TLVDVKVNLGTTTSQTVVTNNLKLTL 1112
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + VIE+++G SG+D +IGNS NN GND G G D+ + +
Sbjct: 1113 SANNVIENIIGGSGSDRLIGNSLNNTLTGGDGNDNLSGGGGNDSL--DGAAGNDNLTGGA 1170
Query: 323 NAI---IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D D I+ I+ A++ L +G +
Sbjct: 1171 GNDRYLYQTGRAFVSSDLGVD---------TINDFTSVADKIVLSKATFSVLNSAVGNGL 1221
Query: 380 FESM 383
Sbjct: 1222 VTGD 1225
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 58/454 (12%), Positives = 122/454 (26%), Gaps = 65/454 (14%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ F +S + + ++ N + LG
Sbjct: 829 TQTGATSFSASTGSVTFAAGSSKATLI-----IDPTADINKEEDETVTLNLNTNPNYTLG 883
Query: 134 LMHPGSYNGGYPVYG-----VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS-- 186
P + + + ++ ++++ + Q S D S Y TP+ +
Sbjct: 884 TSTPVTGTISNDDFYPILSVNNVTVLENNEAYAILTVTLNQASSQDISVNYTTTPVTATP 943
Query: 187 --------DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
D + ++ A + I + ++ + S ++ + +G
Sbjct: 944 ELDYTPISDTLVIE----ANSTTASLFIPIVNDNISEADETFKVTFSNPVNVNIASGVGT 999
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
V L++ + + +N+ + I + G+SGN+++IGNS NNV +GND +
Sbjct: 1000 VTITDTLSSSVSTILPSGVENLKLTGTGNI-NGTGNSGNNLLIGNSGNNVLAGGNGNDSY 1058
Query: 299 ---------------DGSSGLDTFFYYAPSYLYKI-YRFENAIIVYDA------------ 330
+ G DT + K+ + V
Sbjct: 1059 KYSVISQLGSDTISETATGGTDTLDFSGTLVDVKVNLGTTTSQTVVTNNLKLTLSANNVI 1118
Query: 331 ----NEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
D L L D + L+ A ++L G D +
Sbjct: 1119 ENIIGGSGSDRLIGNSLNNTLTGGDGNDNLSGGGGNDSLDGAAGNDNLTGGAGNDRYLYQ 1178
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D + F + + +G+ G
Sbjct: 1179 TGRAFVSSDLGVDTINDFTSVADKIVLSKATF-----SVLNSAVGNGLVTGDFAIVDDDQ 1233
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
S+ ++ + + E
Sbjct: 1234 AAATSNAVIVYSSSSGSLFYNQNGATAGLGSGAE 1267
Score = 38.6 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 56/456 (12%), Positives = 116/456 (25%), Gaps = 51/456 (11%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV-------GSSGNDVVIG 282
+D T+ G D +S ++T A + +++ ++ V
Sbjct: 813 TVDFTVGGTANYNDDYTQTGATSFSASTGSVTFAAGSSKATLIIDPTADINKEEDETVTL 872
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI---IVYDANEHKQDFLS 339
N N + + G+ D F+ + A V QD
Sbjct: 873 NLNTNPNYTLGTSTPVTGTISNDDFYPILSVNNVTVLENNEAYAILTVTLNQASSQDISV 932
Query: 340 DVERLRFADQCIDSVNVKQRSI-LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ ++ +E ++ L I D ++ S ++
Sbjct: 933 NYTTTPVTATPELDYTPISDTLVIEANSTTASLFIPIVNDNISEADETFKVTFSNPVNVN 992
Query: 399 FDSYLYLGSY-DDLRNVFGSDRGAAARHY--ITHGVKEGRNPDAFKALEYIASHEDLINA 455
S + + D L + + + + G G L + + L
Sbjct: 993 IASGVGTVTITDTLSSSVSTILPSGVENLKLTGTGNINGTGNSGNNLLIGNSGNNVLAGG 1052
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA-------- 507
+ + E D+ + G+ D++ G+
Sbjct: 1053 NGNDSYKY-SVISQLGSDTISETATGGTDTLDFSGTLVDVKVNLGTTTSQTVVTNNLKLT 1111
Query: 508 -----------------RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
R D L ++ L A + AG
Sbjct: 1112 LSANNVIENIIGGSGSDRLIGNSLNNTLTGGDGNDNLSGGGGNDSLDGAAGNDNLTGGAG 1171
Query: 551 KDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL-GISG 609
D + Y+ GR+ L D N F S T + G+
Sbjct: 1172 NDRYL---YQTGRAFV---SSDLG--VDTINDFTSVADKIVLSKATFSVLNSAVGNGLVT 1223
Query: 610 MQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFG 645
F V + +++ ++ + + L+ + G
Sbjct: 1224 GDFAIVDD--DQAAATSNAVIVYSSSSGSLFYNQNG 1257
>gi|325198549|gb|ADY94005.1| Iron-regulated protein frpC [Neisseria meningitidis G2136]
Length = 1619
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 58/447 (12%), Positives = 119/447 (26%), Gaps = 48/447 (10%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 446 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 505
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 506 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 565
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 566 VLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 621
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + + + G+ GND + G N+ +GND +G SG
Sbjct: 622 IYSGNGNDTLDGGEGNDALYGYNGNDVLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 681
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 682 SDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 741
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
V ++ ++ + F + + V ++ + + T + L +
Sbjct: 742 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGD 801
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
++G D+ Y N Y +G + L
Sbjct: 802 DYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGE 861
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNF 473
++ LI + G D +
Sbjct: 862 DGNDTLIGGAGNDYLEGGSGSDTYVFG 888
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 59/446 (13%), Positives = 125/446 (28%), Gaps = 56/446 (12%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
++ + T + +D + +G G G +N + G +
Sbjct: 651 GAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 710
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-----IVA 190
+ + ++ + D S Y + D VA
Sbjct: 711 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 770
Query: 191 VQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
K + +Y + +Y + GDDLL+ G N +
Sbjct: 771 TVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDSIYSGN 826
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G E N + + + + G GND + G N+ +GND +G SG DT+
Sbjct: 827 GNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV 886
Query: 309 YYAPSYLYKIYRFE-------------------------------------NAIIVYDAN 331
+ +Y ++ + V
Sbjct: 887 FGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYF 946
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
++ ++ + F + + V ++ + + T + L +
Sbjct: 947 QNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYG 1006
Query: 392 SEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
++G D+ + +Y G+ +D N + Y +G + L
Sbjct: 1007 ADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDAL----YGYNGNDVLNGGEGNDHLNGED 1062
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNF 473
++ LI + G D +
Sbjct: 1063 GNDTLIGGAGNDYLEGGSGSDTYVFG 1088
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 57/442 (12%), Positives = 117/442 (26%), Gaps = 48/442 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + T + +D + +G G G +N + G +
Sbjct: 851 GGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 910
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-----IVA 190
+ + ++ + D S Y + D VA
Sbjct: 911 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 970
Query: 191 VQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
K + +Y + +Y + GDDLL+ G N +
Sbjct: 971 TVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDSIYSGN 1026
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G E N + + + + G GND + G N+ +GND +G SG DT+
Sbjct: 1027 GNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV 1086
Query: 309 YYAPSYLYKIYRFE-------------------------------------NAIIVYDAN 331
+ +Y ++ + V
Sbjct: 1087 FGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYF 1146
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
++ ++ + F + + V ++ + + T + L +
Sbjct: 1147 QNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYG 1206
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
++G D+ Y N Y +G + L ++
Sbjct: 1207 ADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGAEGNDHLNGEDGNDT 1266
Query: 452 LINAFADAPDLVQVGKDHFSNF 473
LI + G D +
Sbjct: 1267 LIGGAGNDYLEGGSGSDTYVFG 1288
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 82/550 (14%), Positives = 146/550 (26%), Gaps = 83/550 (15%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D+ + + D G G + +N + G H +G + G +
Sbjct: 1014 NGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGN 1073
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-----GSLGN--- 204
+ S +Y + D + Y DI ++ G GN
Sbjct: 1074 DYLEGGSGSD-TYVFGKGFGQDTVYNYDYATGRKDI--IRFTDGITADMLTFTREGNHLL 1130
Query: 205 ------------NIYKIEVQQKDSPFIQTIYDSG-----------------GDDLLDLTL 235
Y + +D+G G D L
Sbjct: 1131 IKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQ 1190
Query: 236 IGGV-----KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
G + + + G N +I +++ G GND + G + N+V
Sbjct: 1191 SGNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLN 1250
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ GND +G G DT + + + QD + + +
Sbjct: 1251 GAEGNDHLNGEDGNDTLI--GGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDI 1308
Query: 351 IDSVNVKQRSILEYTASYEDLI--QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
I + +L +T L+ G +F G +Y +
Sbjct: 1309 IRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSG--------AYRIDEIH 1360
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
D V T G + L + L A D G
Sbjct: 1361 FDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLNGDAG-- 1418
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
+ +Y G+ +D + + Y +G + L
Sbjct: 1419 ---------------NDSIYSGNGNDTLDGGEGNDAL----YGYNGNDVLNGGEGNDHLN 1459
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRS 588
++ LI + +G D + FG G+ +N ++ D + G
Sbjct: 1460 GEDGNDTLIGGAGNDYLEGGSGSDTYV-FGKGFGQDTVYN--YHVDKNSDTMHFKG--FK 1514
Query: 589 AAAQHYITHG 598
AA H+I G
Sbjct: 1515 AADVHFIRSG 1524
Score = 68.3 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 70/449 (15%), Positives = 127/449 (28%), Gaps = 48/449 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + T + +D + +G G G +N + G +
Sbjct: 1051 GGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 1110
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-----IVA 190
+ + ++ + D S Y + D VA
Sbjct: 1111 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 1170
Query: 191 VQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
K + +Y + +Y + GDDLL+ G N +
Sbjct: 1171 TVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDSIYSGN 1226
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G E N + + + + G+ GND + G N+ +GND +G SG DT+
Sbjct: 1227 GNDTLDGGEGNDALYGYNGNDVLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV 1286
Query: 309 YYAPSYLYKIYRFENA----IIVYDANEHKQDFLS-----DVERLRFADQC--------- 350
+ +Y ++ A I+ + D L+ + ++ D
Sbjct: 1287 FGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYF 1346
Query: 351 --IDSVNVKQRSILEYTASYEDLIQV--------IGQDVFESMKHFYEFGLSEGRDITFD 400
S + I D+ V G D + + G D
Sbjct: 1347 QNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLG-----D 1401
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
YLY DDL N + Y +G + AL ++ L +
Sbjct: 1402 DYLYGADGDDLLNGDAGNDSI----YSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDH 1457
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+ G D + S Y+
Sbjct: 1458 LNGEDGNDTLIGGAGNDYLEGGSGSDTYV 1486
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 77/253 (30%), Gaps = 11/253 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
++ + T + +D + +G G G +N + G +
Sbjct: 1251 GAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 1310
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-----IVA 190
+ + ++ + D S Y + D VA
Sbjct: 1311 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 1370
Query: 191 VQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
K + +Y +Y + GDDLL+ G N +
Sbjct: 1371 TVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDAGNDSIYSGN 1426
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G E N + + + + G GND + G N+ +GND +G SG DT+
Sbjct: 1427 GNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV 1486
Query: 309 YYAPSYLYKIYRF 321
+ +Y +
Sbjct: 1487 FGKGFGQDTVYNY 1499
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 51/395 (12%), Positives = 104/395 (26%), Gaps = 45/395 (11%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D+ + + D G G + +N + A G H +G + G +
Sbjct: 1214 NGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGAEGNDHLNGEDGNDTLIGGAGN 1273
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI--- 209
+ S +Y + D + Y DI ++ G L
Sbjct: 1274 DYLEGGSGSD-TYVFGKGFGQDTVYNYDYATGRKDI--IRFTDGITADMLTFTREGNHLL 1330
Query: 210 ----EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + + D G +D +D+ T + + + +
Sbjct: 1331 IKAKDGSGQVTVQSYFQNDGSGAYRIDEIHF-DNGKVLDVATVKKLVQQSTDGSDRLYAY 1389
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++ G G+D + G +++ +GND +G DT +Y +
Sbjct: 1390 QSGSTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTL--DGGEGNDALYGYNGND 1447
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
++ + L + LI G D E
Sbjct: 1448 VL--------------------------NGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 1481
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK---- 441
+ +G ++ D + G AA H+I G +
Sbjct: 1482 SDTYVFGKGFGQDTVYNYHVDKNSDTMHFKG--FKAADVHFIRSGSDLVLSASEQDNVRI 1539
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ + + + D + + N G
Sbjct: 1540 SGFFYGENHRVDTFVFDDAAISNPDFAKYINAGNN 1574
>gi|149188797|ref|ZP_01867088.1| RTX toxins and related Ca2+-binding protein [Vibrio shilonii AK1]
gi|148837458|gb|EDL54404.1| RTX toxins and related Ca2+-binding protein [Vibrio shilonii AK1]
Length = 1480
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 67/494 (13%), Positives = 125/494 (25%), Gaps = 19/494 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
SD T D AD G G T+ + + G
Sbjct: 835 GSDAADTLYGGADNDTITGGGGNDTLFAGDGADTVTAGTGDDTVYGEAGNNTVDLGEGND 894
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+G G + + + + +D G +
Sbjct: 895 TLFGGSGSDHAVGGLGNDTLSGGGGADVLSGDAGEDTLDGGDGNDELSGGEATDVLLGGA 954
Query: 196 GAPK--GSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDL 245
G G GN+ + ++ G++L+D GG N L
Sbjct: 955 GNDTLSGDAGNDFIYAGSGDDTLLGGDGTDQLFGESGNNLIDGGSGDDILMGGTGNDTIL 1014
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ I N T++ +++ SG++V+ GN+ ++ + GND DG G D
Sbjct: 1015 GGDGDDFIKTGAGNDTVSGGVGNDNISAESGSNVLSGNAGDDTITSADGNDTLDGGEGND 1074
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEY 364
+ + + + + + + + L
Sbjct: 1075 AL--TSGGGHDTVRGGLGNDTIVASAGNNTLYGDEGNDTISSGAGDDTLYGGSDNDSLIS 1132
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
A ++ L G D + +EG D + N +
Sbjct: 1133 GAGHDKLYGGDGNDTLNAGSGHDVLEGNEGDDKLYGYGDNDQLDGGSGNDQLFGGDGDDQ 1192
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--T 482
G + + L ++ L + Q G D ++ F
Sbjct: 1193 LIGGIGNDKLKGDSGVDLLYGGEGNDRLEGGSGNDTLFGQDGNDTLYGQSGDDQMFGELG 1252
Query: 483 FDSYLYLGSYDDLRNVFGSDR----GAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
D D+L G+D G + G R + ++ L
Sbjct: 1253 DDKLFGGSGNDNLSGKEGNDTLDGGGGSDYVDGGVGNDTLRGGSGDDLVFGQEGNDSLDG 1312
Query: 539 AFADAPDLVQAGKD 552
+G D
Sbjct: 1313 GSGLDQLFAGSGDD 1326
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 56/411 (13%), Positives = 113/411 (27%), Gaps = 24/411 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D S + D G G T+L + ++
Sbjct: 933 DGGDGNDELSGGEATDVLLGGAGNDTLSGDAGNDFIYAGSGDDTLLGGDGTDQL------ 986
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
S N D+ + +++ A + + +D ++ +
Sbjct: 987 -FGESGNNLIDGGSGDDILMGGTGNDTILGGDGDDFIKTGAGNDTVSGGVGNDNISAESG 1045
Query: 195 YGAPKGSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
G+ G++ + GG D + GG+ N + + +
Sbjct: 1046 SNVLSGNAGDDTITSADGNDTLDGGEGNDALTSGGGHDTV----RGGLGNDTIVASAGNN 1101
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G E N TI+ +++ G S ND +I + ++ + GND + SG D
Sbjct: 1102 TLYGDEGNDTISSGAGDDTLYGGSDNDSLISGAGHDKLYGGDGNDTLNAGSGHD--VLEG 1159
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
K+Y + + + + + Q L D + L+ + + L
Sbjct: 1160 NEGDDKLYGYGDNDQLDGGSGNDQ--------LFGGDGDDQLIGGIGNDKLKGDSGVDLL 1211
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D E +G D + + +L + G
Sbjct: 1212 YGGEGNDRLEGGSGNDTLFGQDGNDTLYGQSGDDQMFGELGDDKLFGGSGNDNLSGKEGN 1271
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
++ ++ L D Q G D + F
Sbjct: 1272 DTLDGGGGSDYVDGGVGNDTLRGGSGDDLVFGQEGNDSLDGGSGLDQLFAG 1322
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 60/463 (12%), Positives = 112/463 (24%), Gaps = 12/463 (2%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
T + I D D G I + G G + G
Sbjct: 291 DTIHGGDGADIIIGDDGTDTLYGDAGDDKIFGGKGDDLLEGGEGADELQGEEGNDNILGG 350
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ + ++ G + + +G S G+
Sbjct: 351 SGADFVIGGAGNDTISGGDDNDLLLGGDGDDVMQGDAGNDVLVGEFGNDTLSGGD----G 406
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ G+D L GG + + + E IA +
Sbjct: 407 NDVLIGDSGNDVLVGGLGNDEL----YGGEGSDTIDAGDGDDIVHSNEGADVIATGAGND 462
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
V GNDV+ S +++ F SG++V D +G DT Y +N I
Sbjct: 463 QVYAGEGNDVINTGSGDDIVFGQSGSNVIDTGTGADTI-YTESGDDVISSGADNDTIFAG 521
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ ++ D + + + D + ++ ++ + IG D + +
Sbjct: 522 SGLNQIDSGNGDDTIYADDGADNVISGLGDDVIYAGDGNNTVKAGIGDDKVYAGSGDDDI 581
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+G D F L N G G + L +
Sbjct: 582 DAGDGHDEVFAGGGNDTINAGLGNDSIFAGGGDDVVLGQQGANKLFGEAGNDTLTAGNNA 641
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
+L + D + ++ F V G
Sbjct: 642 SELFGGSGNDVLTGSDENDLLAGGSDDDQLFSGKGDDTIFAGSGADNVVTGEGND---TV 698
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G A+ + + + G D
Sbjct: 699 FGEAGSNTISTGTGDDAVYGGTGADTVDAGEGNDAIYADRGND 741
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 62/452 (13%), Positives = 111/452 (24%), Gaps = 50/452 (11%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
V+D F E+ + +D + F V I + A
Sbjct: 156 VIDFEFTESQVSAD---------------------TPVFFSLESVDGTPIDDDLESVNIA 194
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+H I +YG D + Y D +D
Sbjct: 195 VHNI-------------FNDQIYGGAGDDILKGQQGNDTIYGGTGDDFLDGDINDDRLFG 241
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGV 239
+ G S G S T++ GDD L D T+ GG
Sbjct: 242 EEGNDVLVGGNGDDYLSGG----TGNDTLLGSDGNDTLHGDEGDDTLLGELGDDTIHGGD 297
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
I + + ++ G + I + + G G D + G N+ SG D
Sbjct: 298 GADIIIGDDGTDTLYGDAGDDKIFGGKGDDLLEGGEGADELQGEEGNDNILGGSGADFVI 357
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNV 356
G +G DT + D L + L D +
Sbjct: 358 GGAGNDTI----SGGDDNDLLLGGDGDDVMQGDAGNDVLVGEFGNDTLSGGDGNDVLIGD 413
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+L ++L G D ++ +EG D+ Y N
Sbjct: 414 SGNDVLVGGLGNDELYGGEGSDTIDAGDGDDIVHSNEGADVIATGAGNDQVYAGEGNDVI 473
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ + G + + + + + + G + + +
Sbjct: 474 NTGSGDDIVFGQSGSNVIDTGTGADTIYTESGDDVISSGADNDTIFAGSGLNQIDSGNGD 533
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ + + + D G
Sbjct: 534 DTIYADDGADNVISGLGDDVIYAGDGNNTVKA 565
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 58/519 (11%), Positives = 116/519 (22%), Gaps = 49/519 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + + A+ G T+ + N E+ G
Sbjct: 591 FAGGGNDTINAGLGNDSIFAGGGDDVVLGQQGANKLFGEAGNDTLTAGNNASELFGGSGN 650
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ + G +D + S + + G + +
Sbjct: 651 DVLTGSDENDLLAGGSDDDQLFSGKGDDTIFAGSGADNVVTGEGNDTVFGEAGSNTISTG 710
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID-----LNTES 249
G G IY G+D++ L + D +
Sbjct: 711 TGDDAVYGG----TGADTVDAGEGNDAIYADRGNDVVHAGLGDDHIDGGDGDDKLYGQDG 766
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV----------FD 299
+I G + N + + + G +G+DV+ + +GND
Sbjct: 767 NDAIFGGDGNDELVGGDGYDFLAGGAGDDVMTD-DGQDTLLGEAGNDTLTAAATGSHNIY 825
Query: 300 GSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQ----------------- 335
G +G DT Y + I ++ +
Sbjct: 826 GGTGDDTLIGSDAADTLYGGADNDTITGGGGNDTLFAGDGADTVTAGTGDDTVYGEAGNN 885
Query: 336 --DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D + L +V L + L G+D + E E
Sbjct: 886 TVDLGEGNDTLFGGSGSDHAVGGLGNDTLSGGGGADVLSGDAGEDTLDGGDGNDELSGGE 945
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
D+ D N F G + ++ + + L+
Sbjct: 946 ATDVLLGGAGNDTLSGDAGNDFIYAGSGDDTLLGGDGTDQLFGESGNNLIDGGSGDDILM 1005
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
+ L G D + + +
Sbjct: 1006 GGTGNDTILGGDGDDFIKTGAGNDTVSGGVGNDNISAESGSNVLSGNAGDDTITS---AD 1062
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G + AL H+ + + + AG +
Sbjct: 1063 GNDTLDGGEGNDALTSGGGHDTVRGGLGNDTIVASAGNN 1101
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 55/454 (12%), Positives = 108/454 (23%), Gaps = 46/454 (10%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
Y+ D+ +DS+ T+ Y + + + + Q
Sbjct: 60 EYDSSSNSETSDSSSGDDSWGTTTTVYSYSGSESNSSEETIVHGVRLGNYIIEQTGNLTA 119
Query: 199 KGSLGNNIYKIEVQQKDSPFI-----QTIYDSGGDDLLD---------------LTLIGG 238
++ + V KD + + I D GD ++D +L
Sbjct: 120 NFNVSGTYETVIVTIKDDQGVVIHSQEAIVDENGDVVIDFEFTESQVSADTPVFFSLESV 179
Query: 239 VKNYID------------------LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
ID + G + N TI T + + G +D +
Sbjct: 180 DGTPIDDDLESVNIAVHNIFNDQIYGGAGDDILKGQQGNDTIYGGTGDDFLDGDINDDRL 239
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLS 339
G N+V +G+D G +G DT ++ E +
Sbjct: 240 FGEEGNDVLVGGNGDDYLSGGTGNDTLL--GSDGNDTLHGDEGDDTLLGELGDDTIHGGD 297
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + D + + L G D + + G D
Sbjct: 298 GADIIIGDDGTDTLYGDAGDDKIFGGKGDDLLEGGEGADELQGEEGNDNILGGSGADFVI 357
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
N G L ++ LI +
Sbjct: 358 GGAGNDTISGGDDNDLLLGGDGDDVMQGDAGNDVLVGEFGNDTLSGGDGNDVLIGDSGND 417
Query: 460 PDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
+ +G D + G + D ++ D+ + + Y G
Sbjct: 418 VLVGGLGNDELYGGEGSDTIDAGDGDDIVHSNEGADVIATGAGND----QVYAGEGNDVI 473
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ + + ++G D
Sbjct: 474 NTGSGDDIVFGQSGSNVIDTGTGADTIYTESGDD 507
>gi|163850263|ref|YP_001638306.1| hypothetical protein Mext_0830 [Methylobacterium extorquens PA1]
gi|163661868|gb|ABY29235.1| hypothetical protein Mext_0830 [Methylobacterium extorquens PA1]
Length = 294
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 39/132 (29%), Gaps = 21/132 (15%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
FD+ Y + HY G + RNP+ F Y
Sbjct: 29 FDAAYYRERNPGVARSGLD----PFLHYAWFGARRDRNPNADFDTAFYRRQSG------- 77
Query: 542 DAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
H+ G +G S F+ LYL Y D+ H+ T G
Sbjct: 78 ---RTRLDPLRHYGQIGAAQGLDPSPGFSTSLYLARYPDVVAA----GVNPLLHFRTDGR 130
Query: 600 KEGRALGISGMQ 611
EGR S ++
Sbjct: 131 AEGREAAPSPIE 142
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 37/134 (27%), Gaps = 22/134 (16%)
Query: 394 GRDI-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHED 451
GR FD+ Y HY G + RNP+ F Y
Sbjct: 23 GRVPKLFDAAYYRERNP----GVARSGLDPFLHYAWFGARRDRNPNADFDTAFYRRQS-- 76
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
H+ G +G F + LYL Y D+ + H
Sbjct: 77 --------GRTRLDPLRHYGQIGAAQGLDPSPGFSTSLYLARYPDVVAAGVN----PLLH 124
Query: 510 YITHGVKEGRNPDA 523
+ T G EGR
Sbjct: 125 FRTDGRAEGREAAP 138
Score = 44.0 bits (102), Expect = 0.085, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 14/98 (14%)
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYL 403
F + + N + S G+ + ++H+ + G ++G D + F + L
Sbjct: 55 FGARRDRNPNADFDTAFYRRQS--------GRTRLDPLRHYGQIGAAQGLDPSPGFSTSL 106
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
YL Y D+ H+ T G EGR
Sbjct: 107 YLARYPDVVAA----GVNPLLHFRTDGRAEGREAAPSP 140
>gi|126727753|ref|ZP_01743584.1| hypothetical protein RB2150_00360 [Rhodobacterales bacterium
HTCC2150]
gi|126703009|gb|EBA02111.1| hypothetical protein RB2150_00360 [Rhodobacterales bacterium
HTCC2150]
Length = 867
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/269 (13%), Positives = 68/269 (25%), Gaps = 8/269 (2%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + +++ G D + L G N + + G +
Sbjct: 529 MRGDDTLNGGAGKDSLFGGVGHDDIYGGFHSDKLYGDDNNDLIYGGVGNDFLYGGADTDS 588
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G GND G + F + ND G D + L K+Y
Sbjct: 589 LYGDEGNDKLYGGQGNDFFYGGDGFDKLFGGTENDRLYGDLKNDKLY--GQDGLDKLYGG 646
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDS-VNVKQRSILEYTASYEDLIQVIGQDVF 380
+ +++ ++ + D E F + +D V L A + L D
Sbjct: 647 DGNDVMFGGSDADSIYGGDAEDKLFGNGDVDLLVGGSGNDKLYGHAGNDMLYGGGNDDTL 706
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
H D F Y D N + + E
Sbjct: 707 FGGNHNDLMYGGNSADSFFGGAGNDEIYGDDGNDNLKGQAGSDTLDGGAHNDELFGGGDN 766
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDH 469
L + + + G
Sbjct: 767 DTLTGGTGDDTMSGGSGSDTFIFADGFGT 795
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 67/439 (15%), Positives = 122/439 (27%), Gaps = 34/439 (7%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
N ++ MS + + + T V D YG+
Sbjct: 376 HDVNFNVDAADSGLEWTFGVTGALDMSSLGSWTLEVTDTDAWGDTGTVYDWT--LDFYGS 433
Query: 198 PKGSLGN---NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ + D+ +GG D L+ ++ I+L+ ++ ++
Sbjct: 434 ASSTDDVHHFTGDFFALVALDASRGLIEDTNGGIDWLNFSVASVGLQ-INLDAKTINAT- 491
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + M I + IE+V+ GND++ G++ N G+D +G +G D+ F
Sbjct: 492 GVAETMIIGATSEIENVMAGDGNDLLTGDALANEMHGMRGDDTLNGGAGKDSLF------ 545
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
D L D L A + L
Sbjct: 546 -------GGVGHDDIYGGFHSDKLYG------DDNNDLIYGGVGNDFLYGGADTDSLYGD 592
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D + F +G D F Y DL+N + + Y G
Sbjct: 593 EGNDKLYGGQGNDFFYGGDGFDKLFGGTENDRLYGDLKNDKLYGQDGLDKLYGGDGNDVM 652
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR-FVTFDSYLYLGSYD 493
++ + + L + G D + D L+ G+++
Sbjct: 653 FGGSDADSIYGGDAEDKLFGNGDVDLLVGGSGNDKLYGHAGNDMLYGGGNDDTLFGGNHN 712
Query: 494 DLR-----NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
DL Y G + L+ A +++L +
Sbjct: 713 DLMYGGNSADSFFGGAGNDEIYGDDGNDNLKGQAGSDTLDGGAHNDELFGGGDNDTLTGG 772
Query: 549 AGKDHFSNFGYEEGRSITF 567
G D + G + F
Sbjct: 773 TGDD--TMSGGSGSDTFIF 789
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/338 (12%), Positives = 86/338 (25%), Gaps = 18/338 (5%)
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
++ S + D D+ + + G
Sbjct: 487 TINATGVAETMIIGATSEIENVMAGDGNDLLTGDALANEMHGMRGDDTLNGGAGKDSLFG 546
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
G +YG + + + + Y D +G T + K+YG
Sbjct: 547 GVGHDDIYGGFHSDKLYGDDNNDLIYGGV---GNDFLYGGADTDSLYGDEGNDKLYGGQ- 602
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
++ +D L G +KN + + G + N
Sbjct: 603 ---------GNDFFYGGDGFDKLFGGTENDRL----YGDLKNDKLYGQDGLDKLYGGDGN 649
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + +S+ G D + GN ++ SGND G +G D Y +
Sbjct: 650 DVMFGGSDADSIYGGDAEDKLFGNGDVDLLVGGSGNDKLYGHAGNDML-YGGGNDDTLFG 708
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
N ++ + + + + D + L+ A ++L D
Sbjct: 709 GNHNDLMYGGNSADSFFGGAGNDEIYGDDGNDNLKGQAGSDTLDGGAHNDELFGGGDNDT 768
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
G D + + N +
Sbjct: 769 LTGGTGDDTMSGGSGSDTFIFADGFGTDIITDFNATNN 806
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 48/292 (16%), Positives = 77/292 (26%), Gaps = 19/292 (6%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
D G + G +YG
Sbjct: 568 NDLIYGGVGNDFLYGGADTDSLYGDEGNDKLYGGQGNDFFYGGDGFDKLFGGTENDRLYG 627
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ + Y D FG + A K++G L
Sbjct: 628 DLKNDKLYGQDGLDKLYGGD---GNDVMFGGSDADSIYGGDAEDKLFGNGDVDLLVGG-S 683
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ +Y G DD L GG N + S S G N I
Sbjct: 684 GNDKLYGHAGNDMLYGGGNDDTL----FGGNHNDLMYGGNSADSFFGGAGNDEIYGDDGN 739
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G +G+D + G + N+ F ND G +G DT + +
Sbjct: 740 DNLKGQAGSDTLDGGAHNDELFGGGDNDTLTGGTGDDT-----------MSGGSGSDTFI 788
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
A+ D ++D A++ S + T + I +G DV
Sbjct: 789 FADGFGTDIITDFNATNNAEKIDLSGVSAITDYTDLTTLANNHIAQVGLDVV 840
>gi|119489485|ref|ZP_01622246.1| hypothetical protein L8106_27926 [Lyngbya sp. PCC 8106]
gi|119454564|gb|EAW35711.1| hypothetical protein L8106_27926 [Lyngbya sp. PCC 8106]
Length = 1532
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 77/266 (28%), Gaps = 25/266 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + I+ + G+D ++ I G E N I
Sbjct: 1259 GDDNIYGTSASLEIFGNKGNDYIEGQANSEA-------------IYGGENNDQIKGENGN 1305
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G ND + G + ++V + ++GND +G+ G D+ + S
Sbjct: 1306 DTLFGDKDNDAITGGNGDDVIYGNTGNDTLEGAQGNDSLY----SGQDNDLAKGGVGNDL 1361
Query: 329 DANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ D + E L ++ + L G D
Sbjct: 1362 VFGDIGDDIVEGNEGNDTLHGNQGVDTISGNDGDDLIYGGQGNDLLDGNNGSDTLFGDNG 1421
Query: 386 FYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
G D D + D L G DR + + + + + +
Sbjct: 1422 DDTLDGGFGDDSLIGGNGDDWLVGAEGNDTLTGGEGRDRFYISSSFDDNFITDFADGFDK 1481
Query: 441 KALEYIASHEDLINAFADAPDLVQVG 466
AL + E L + L+++
Sbjct: 1482 IALTGGLTFEQLEITSDNGSTLIKLA 1507
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/240 (15%), Positives = 74/240 (30%), Gaps = 19/240 (7%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G E + I + + G+ GND + G + + + ND G +G DT F
Sbjct: 1254 VFGLEGDDNIYGTSASLEIFGNKGNDYIEGQANSEAIYGGENNDQIKGENGNDTLF--GD 1311
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
I ++Y + L A + + + + + +
Sbjct: 1312 KDNDAITGGNGDDVIYGNTGNDT--------LEGAQGNDSLYSGQDNDLAKGGVGNDLVF 1363
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
IG D+ E + ++G D D +Y G +DL + +
Sbjct: 1364 GDIGDDIVEGNEGNDTLHGNQGVDTISGNDGDDLIYGGQGNDLLDGNNGSDTL----FGD 1419
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYL 487
+G +L + L+ A + G+D + + ++ F
Sbjct: 1420 NGDDTLDGGFGDDSLIGGNGDDWLVGAEGNDTLTGGEGRDRFYISSSFDDNFITDFADGF 1479
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/255 (15%), Positives = 78/255 (30%), Gaps = 13/255 (5%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E + D +S N V D + + G I I
Sbjct: 1236 REATSQGDNLEATSENQKVFGLEGDDNIYGTS---ASLEIFGNKGNDYIEGQANSEAIYG 1292
Query: 131 ALGLMHPGSYNGGYPVYGV-DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
NG ++G DND V+ D++ A + +
Sbjct: 1293 GENNDQIKGENGNDTLFGDKDNDAITGGNGDDVIYGNTGNDTLEGAQGNDSLYSGQDNDL 1352
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A + G+ + + + T++ + G D + G + + +
Sbjct: 1353 AKGGV--GNDLVFGD---IGDDIVEGNEGNDTLHGNQGVDTI----SGNDGDDLIYGGQG 1403
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G + T+ +++ G G+D +IG + ++ + GND G G D F+
Sbjct: 1404 NDLLDGNNGSDTLFGDNGDDTLDGGFGDDSLIGGNGDDWLVGAEGNDTLTGGEGRDRFYI 1463
Query: 310 YAPSYLYKIYRFENA 324
+ I F +
Sbjct: 1464 SSSFDDNFITDFADG 1478
Score = 37.8 bits (86), Expect = 5.9, Method: Composition-based stats.
Identities = 27/235 (11%), Positives = 52/235 (22%), Gaps = 46/235 (19%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ +S N V G ++ + +S + G+ G D + + IY EN
Sbjct: 1243 DNLEATSENQKVFGLEGDDNIYGTSASLEIFGNKGND--YIEGQANSEAIYGGEN----- 1295
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
++ + L D
Sbjct: 1296 ------------------------------NDQIKGENGNDTLFGDKDNDAITGGNGDDV 1325
Query: 389 FGLSEGRDIT-----FDSYLYLGSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDA 439
+ G D DS D + G+D G
Sbjct: 1326 IYGNTGNDTLEGAQGNDSLYSGQDNDLAKGGVGNDLVFGDIGDDIVEGNEGNDTLHGNQG 1385
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ + + + G D ++ F +G D
Sbjct: 1386 VDTISGNDGDDLIYGGQGNDLLDGNNGSDTLFGDNGDDTLDGGFGDDSLIGGNGD 1440
>gi|302187584|ref|ZP_07264257.1| putative hemolysin-type calcium-binding region [Pseudomonas syringae
pv. syringae 642]
Length = 1588
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 85/299 (28%), Gaps = 12/299 (4%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S +D ++G+S N+V G D G G D + + +
Sbjct: 1205 HIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTV 1264
Query: 330 ANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ +++E L I+ ++++ AS L G D+
Sbjct: 1265 VSSVSWTLGANLENLLLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTGGDGSDS 1324
Query: 389 FGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRGAAARH---YITHGVKEGRNPDAFKAL 443
+ + + R + ++ +G D + + S A + G +
Sbjct: 1325 YYVDDAADRVVETNADAQVGGVDTVYSSLASYTLGANLENIVINSSGAANAIGNALDNVI 1384
Query: 444 EYIASHEDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
AS + + Q+ + L ++L +D
Sbjct: 1385 YAGASDNVMDGRDGNDTVSYQLATAGVTVALNTSAQQATGGSGLDTLKGTENLIGSQFAD 1444
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
++ T L A + LI + G DH+ G +
Sbjct: 1445 TLTGNKNANTLS-----GGAGNDTLSGGAGDDVLIGGSGADTLIGGTGADHYVFNGISD 1498
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 54/497 (10%), Positives = 119/497 (23%), Gaps = 34/497 (6%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ + + + D G G ++ ++ G +
Sbjct: 360 VTVNGTEGNDVITGGAAHELIFGLTGKDTLNGGSGDDILVGGAGADKLTGGAGAD-TFRF 418
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ Y D +S S + + +I +
Sbjct: 419 DQLTDSYRTATTSATDLVTDFDISQDRIDLSNLGFTGLGSGKAGTLNI--------SYNA 470
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+L K + D L+ + + + G
Sbjct: 471 TLDRTYIKSLDADASGNRFELGLSGNLKDTLNASHFTFQR-----------VVEGTAGGD 519
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T+ + + G++G D + G + + + D G +G D F Y + Y+ Y
Sbjct: 520 TLTGTDGNDVLNGNAGTDRIDGGAGADTITGGADADTLTGGAGADLFIYNSRLDSYRNYT 579
Query: 321 FENA----IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
I + LS + D +++ + + T D + G
Sbjct: 580 ASGTKQSDTITDFNPAEDRIDLSSIGLRGLGDGSANTIYLSVNADGSKTYIKTDAVDSTG 639
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+++ LS F + L + + +
Sbjct: 640 NRFEIALQGNLADKLSASN-FIFSTAASANQAPVLNTPLMDQNVTELKAFSYAVQPGSFS 698
Query: 437 PDAFKALEYIASHEDLINAFA----DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
L Y A+ D D+ L G + G D+ +
Sbjct: 699 DPDSNTLTYSATLADNSALPDWLKFDSKTLTFSGTPGGTASGLYSVLLTASDATGASVAD 758
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
V G + + + + + L AG+D
Sbjct: 759 SFAITVGNVAPGILTGTEN---AEALYGTEGNDTILGLGGDDTLRGDTGADIINGGAGRD 815
Query: 553 HFSNFGYEEGRSITFNP 569
+ +G + + ++
Sbjct: 816 --ALYGGADADTFVYSA 830
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/297 (15%), Positives = 87/297 (29%), Gaps = 14/297 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS---- 251
G N+ Y + + +D +I + + T G Y D + +
Sbjct: 305 GNTITGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDAFPLV 360
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G E N I E + G +G D + G S +++ +G D G +G DTF +
Sbjct: 361 TVNGTEGNDVITGGAAHELIFGLTGKDTLNGGSGDDILVGGAGADKLTGGAGADTFRFDQ 420
Query: 312 PSYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ Y+ +V D + LS++ ++N+ + L+ T
Sbjct: 421 LTDSYRTATTSATDLVTDFDISQDRIDLSNLGFTGLGSGKAGTLNISYNATLDRTYIKSL 480
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G + + L+ D L G+D G
Sbjct: 481 DADASGNRFELGLSGNLKDTLNASHFTFQRVVEGTAGGDTLTGTDGNDVLN-----GNAG 535
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ A + L + D + N+ + +
Sbjct: 536 TDRIDGGAGADTITGGADADTLTGGAGADLFIYNSRLDSYRNYTASGTKQSDTITDF 592
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/283 (12%), Positives = 82/283 (28%), Gaps = 23/283 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE N + + S + E + + N
Sbjct: 1240 DIYVVDNAFDTVTESNDS-PSQVDTVVSSVSWTLGANLENLLLTGVSAINGTGNAVKNVI 1298
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ + AD+ G G + +A +
Sbjct: 1299 IGNASNNILDGAAGADMLTGGDGSDSYYVDDAA---------------DRVVETNADAQV 1343
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ +S+ SY + + A + + + GA + + +
Sbjct: 1344 GGVDTVYSSLASYTLGANLENIVINSSGAANAIGNALDNVIYAGASDNVM-------DGR 1396
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ + +G L+ + + ++ G + T+ + ++
Sbjct: 1397 DGNDTVSYQLATAGVTVALNTSAQQATGGSGLDTLKGTENLIGSQFADTLTGNKNANTLS 1456
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
G +GND + G + ++V SG D G +G D + + S
Sbjct: 1457 GGAGNDTLSGGAGDDVLIGGSGADTLIGGTGADHYVFNGISDT 1499
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 31/243 (12%), Positives = 70/243 (28%), Gaps = 9/243 (3%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG----HALGLMHPGSYNGGYP 145
R + + + + G T + +A+ G AL +
Sbjct: 600 DLSSIGLRGLGDGSANTIYLSVNADGSKTYIKTDAVDSTGNRFEIALQGNLADKLSASNF 659
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
++ L + + + + + D + S +
Sbjct: 660 IFSTAASANQAPVLNTPLMDQNVTELKAFSYAVQPGSFSDPDSNTLTYSATLADNSALPD 719
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWSSIGGYEKNM 260
K + + SG +L + I + + + G E
Sbjct: 720 WLKFDSKTLTFSGTPGGTASGLYSVLLTASDATGASVADSFAITVGNVAPGILTGTENAE 779
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ ++++G G+D + G++ ++ +G D G + DTF Y A + Y+ Y
Sbjct: 780 ALYGTEGNDTILGLGGDDTLRGDTGADIINGGAGRDALYGGADADTFVYSALTDSYRDYD 839
Query: 321 FEN 323
Sbjct: 840 AGG 842
>gi|17230147|ref|NP_486695.1| hypothetical protein all2655 [Nostoc sp. PCC 7120]
gi|17131748|dbj|BAB74354.1| all2655 [Nostoc sp. PCC 7120]
Length = 3262
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 46/179 (25%), Gaps = 30/179 (16%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G N ++ + + + G GND + G + +++ GND G +G +
Sbjct: 3059 GDAGDNILVGDGNNNSLFGNAGNDRIFGGLGNDYLFGGADDDLLNGGDGNDALFGGAGNN 3118
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T D+L+ IL
Sbjct: 3119 TLL----------------------GGAGNDYLTG------GAGNNLLDGGDGNDILYGG 3150
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
L+ G D+ S G D F + G D +
Sbjct: 3151 NGNNTLLGGAGNDIIYSGSGDDLINGGLGNDTIF--LNGGQDTVVVAQGAGIDTINNFQ 3207
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/232 (16%), Positives = 71/232 (30%), Gaps = 20/232 (8%)
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI---EVQ 212
D V + + +I+ + G+ GN+
Sbjct: 3033 DGEQYQVSPDAGSIALTISDTPTNPVGDAGDNILVGDGNNNSLFGNAGNDRIFGGLGNDY 3092
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ G+D L GG N L + G N + + +
Sbjct: 3093 LFGGADDDLLNGGDGNDAL----FGGAGNNTLLGGAGNDYLTGGAGNNLLDGGDGNDILY 3148
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GN+ ++G + N++ + SG+D+ +G G DT F V A
Sbjct: 3149 GGNGNNTLLGGAGNDIIYSGSGDDLINGGLGNDTIFLNG-----------GQDTVVVAQG 3197
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D +++ + Q + L T S D + +G + +K
Sbjct: 3198 AGIDTINNFQVSL--GQKVGLSGGLTFEQLTLTQSGLDTLVKVGDETLAVLK 3247
>gi|329849533|ref|ZP_08264379.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328841444|gb|EGF91014.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 454
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 87/279 (31%), Gaps = 6/279 (2%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GGV + + ++ G + N I + + G +G+D ++G ++V +GND
Sbjct: 15 GGVADDVLYGNNGNDTLNGGDGNDYIDGGNNNDVLAGGNGHDTLLGGGGSDVLNAGAGND 74
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD-----ANEHKQDFLSDVERLRFADQCI 351
+ DG +G+DT Y I + A + + D L ++E + +D
Sbjct: 75 LVDGGAGVDTVSYAGAVNGMWIELNQGATAGFSRDGNLSGAMGTDSLRNLENVVGSDFSD 134
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
++++ Y+ L G D + S+ + L G+Y L
Sbjct: 135 IIKGNSGNNLIQGGNGYDTLYASRGIDTLDGGVGGGSANFSDISGLAATVNLTTGAYS-L 193
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ T L+ A ++ + G D
Sbjct: 194 NAGNYGTLISIDDATGTALNDSFTGNSGRNVLDGAAGNDTIAGGGGHDDVWGGAGADRLI 253
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
G + + Y + D + + +
Sbjct: 254 ADGGNDRLTGNYSFAGYGDNATDTFVIRTNAGAVTISDF 292
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/294 (16%), Positives = 81/294 (27%), Gaps = 25/294 (8%)
Query: 83 SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
+ NG + + D G G I N + G G
Sbjct: 4 FNGNGQSNLYNGGVADDVLYGNNGNDTLNGGDGNDYIDGGNNNDVLAGGNGHDTLLGGGG 63
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+ + D + + M AT S + G
Sbjct: 64 SDVLNAGAGNDLVDGGAGVDTVSYAGAVNGMWIELNQGATAGFSRDGNLSGAMGTDSLRN 123
Query: 203 GNNIYK-----------IEVQQKDSPFIQTIYDSGGDDLLD---------LTLIGGVKNY 242
N+ + T+Y S G D LD + I G+
Sbjct: 124 LENVVGSDFSDIIKGNSGNNLIQGGNGYDTLYASRGIDTLDGGVGGGSANFSDISGLAAT 183
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
++L T ++S G + I+ G++ ND GNS NV ++GND G
Sbjct: 184 VNLTTGAYSLNAGNYGTL-----ISIDDATGTALNDSFTGNSGRNVLDGAAGNDTIAGGG 238
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G D + A + + + + D +D +R + +
Sbjct: 239 GHDDVWGGAGADRLIADGGNDRLTGNYSFAGYGDNATDTFVIRTNAGAVTISDF 292
Score = 44.0 bits (102), Expect = 0.080, Method: Composition-based stats.
Identities = 43/310 (13%), Positives = 85/310 (27%), Gaps = 39/310 (12%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G+ +++ G A++V + ++GND +G G D Y A
Sbjct: 5 NGNGQSNLYNGGVADDVLYGNNGNDTLNGGDGND-------------YIDGGNNNDVLAG 51
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ D L + +L A + + G D
Sbjct: 52 GNGHDTL---------------LGGGGSDVLNAGAGNDLVDGGAGVDTVSY-AGAVNGMW 95
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
E + + +L G+D + + + ++ L + D
Sbjct: 96 IE---LNQGATAGFSRDGNLSGAMGTDSLRNLENVVGSDFSDIIKGNSGNNLIQGGNGYD 152
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD--SYLYLGSYDDLRNVFGSDRGAAARH 509
+ A L +NF G T + + Y + + + D
Sbjct: 153 TLYASRGIDTLDGGVGGGSANFSDISGLAATVNLTTGAYSLNAGNYGTLISIDDATGTAL 212
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
+ GRN L+ A ++ + AG D G + + ++
Sbjct: 213 NDSFTGNSGRNV-----LDGAAGNDTIAGGGGHDDVWGGAGADRLIADGGNDRLTGNYSF 267
Query: 570 DLYLTSYDDL 579
Y + D
Sbjct: 268 AGYGDNATDT 277
>gi|251825696|gb|ACT20898.1| protease [Microbacterium sp. SRC-008]
gi|251825706|gb|ACT20903.1| protease [Bacillus sp. SRC-007]
Length = 125
Score = 78.7 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 40/120 (33%), Gaps = 10/120 (8%)
Query: 56 RWALGEWSKVVDLTFEETSIHSDIKFISSN-------NGYVCTPRYDSRYFMEINF--DK 106
+ +L W+ V ++ F + N + P + + +
Sbjct: 6 QLSLQSWADVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPDALKGQSWYLINS 65
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG-YPVYGVDNDYENDSFLTSVMSY 165
+ G HEIGH LGL HPG YN G D Y D+ S MSY
Sbjct: 66 SYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAEDTRAYSGMSY 125
>gi|307579000|gb|ADN62969.1| peptidase M23 [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 936
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/273 (15%), Positives = 81/273 (29%), Gaps = 18/273 (6%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
++ SD+ +S N + + I D G+G + +
Sbjct: 588 TLGSDLLVGTSGNDLIRGGGNGEGNDILIGKGGNDELSGGLGDDILDGGTGNDVL----- 642
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
S G Y + D S + T + +
Sbjct: 643 -----SGGTGNDTYRLAIGAGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVI 697
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTI------YDSGGDDLLDLTLIGGVKNYIDLNT 247
YG ++ D+ Q + +D ++ N I
Sbjct: 698 KYGTGDQLTISS--YFHPGFSDAKIEQFMFSDGVTWDEAAIKARVISNGDASNNTIIGYK 755
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + I G + N I + + + G +GND++ G + SGNDV G +G DT+
Sbjct: 756 DGSNRIYGLDGNDEIYGGALDDMLYGGAGNDMLSGGKGADTLDGGSGNDVLYGGTGNDTY 815
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + +I ++ D Q +
Sbjct: 816 RFAIGAGVDRIEDYDTTTGNADVLSIGQGVSIN 848
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/266 (13%), Positives = 69/266 (25%), Gaps = 71/266 (26%)
Query: 249 SWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G N I + ++G GND + G +++ +GNDV G +G D
Sbjct: 590 GSDLLVGTSGNDLIRGGGNGEGNDILIGKGGNDELSGGLGDDILDGGTGNDVLSGGTGND 649
Query: 306 TFFYYAPSYLYKIYRFEN-------------------------AIIVYDANEHKQDFLSD 340
T+ + + +I ++ +V Q +S
Sbjct: 650 TYRLAIGAGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKYGTGDQLTISS 709
Query: 341 ----------VERLRFAD-----------------------------QCIDSVNVKQRSI 361
+E+ F+D +
Sbjct: 710 YFHPGFSDAKIEQFMFSDGVTWDEAAIKARVISNGDASNNTIIGYKDGSNRIYGLDGNDE 769
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ A + L G D+ K G D+ + D R G+
Sbjct: 770 IYGGALDDMLYGGAGNDMLSGGKGADTLDGGSGNDVLYGGTG----NDTYRFAIGAGVDR 825
Query: 422 AARHYITHGVKEGRNPDAFKALEYIA 447
+ T G + + ++ +
Sbjct: 826 IEDYDTTTGNADVLSIGQGVSINQLW 851
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 42/321 (13%), Positives = 73/321 (22%), Gaps = 51/321 (15%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
W++IG ++ A + SS V++ + + + G+D+ G+SG D
Sbjct: 546 GWNAIGFLADQLSAAPDMEGFN-RESSSWTVILYAANEHYLPGTLGSDLLVGTSGND--- 601
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+I N D L + IL+
Sbjct: 602 ----------------LIRGGGNGEGNDILIG------KGGNDELSGGLGDDILDGGTGN 639
Query: 369 EDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L G D S+ D + Y
Sbjct: 640 DVLSGGTGNDTYRLAIGAGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKY 699
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ F A E + + D + SN + +
Sbjct: 700 G--TGDQLTISSYFHPGFSDAKIEQFMFSDGVTWDEAAIKARVISNGDASNNTIIGYKD- 756
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
+ R Y G E L A ++ L
Sbjct: 757 ------------------GSNRIYGLDGNDEIYGGALDDMLYGGAGNDMLSGGKGADTLD 798
Query: 547 VQAGKDHFSNFGYEEGRSITF 567
+G D +G + F
Sbjct: 799 GGSGND--VLYGGTGNDTYRF 817
>gi|148242012|ref|YP_001227169.1| hypothetical protein SynRCC307_0913 [Synechococcus sp. RCC307]
gi|147850322|emb|CAK27816.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 666
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 47/144 (32%), Gaps = 5/144 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G +N + + V G +G+D + G N+V + + ND G SG DT + +
Sbjct: 441 LKGSHRNDRLVGRGGNDRVYGRNGHDKLYGGRRNDVMYGGNHNDYLHGGSGRDTAVFSSR 500
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + +D L +E + K + L + L
Sbjct: 501 KNRINL-----NTTKWQNTGDGRDRLVSIENVNAGGGNDIVTGNKFSNRLNGQNGRDVLN 555
Query: 373 QVIGQDVFESMKHFYEFGLSEGRD 396
G DV + G D
Sbjct: 556 GGGGNDVLLGGGGNDQLRGGSGND 579
Score = 72.1 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/342 (15%), Positives = 91/342 (26%), Gaps = 54/342 (15%)
Query: 46 ELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYV---------------C 90
+ + A + + F + +S +
Sbjct: 295 GFSSGLDRAVKAAANQ-----GIKFSIAAGNSGNDADWYSPASAGEHKNVYTISAVDNRY 349
Query: 91 TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG-------HALGLMHPGSYNGG 143
S + D D G+G + +L + HA GL+ G+ G
Sbjct: 350 QMASWSNWDNPSGGDDVDFAAPGVGVLSYYQGGSLAYLSGTSMAAPHAAGLLLMGNVKAG 409
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQD-----------------SMMDASFGYCATPMVS 186
V Y + L + + P D +G +
Sbjct: 410 DMVKANRAGYADPFALGTTSTTPKPPQQGLILKGSHRNDRLVGRGGNDRVYGRNGHDKLY 469
Query: 187 DIVAVQKIYGAPKGS-----LGNNIYKIEVQQKDSPFIQTIYD--SGGDDLLDLT--LIG 237
+YG G + ++ T + G D L +
Sbjct: 470 GGRRNDVMYGGNHNDYLHGGSGRDTAVFSSRKNRINLNTTKWQNTGDGRDRLVSIENVNA 529
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G N I + + + G + + ++G GND + G S N+ + GND
Sbjct: 530 GGGNDIVTGNKFSNRLNGQNGRDVLNGGGGNDVLLGGGGNDQLRGGSGNDRLVGNQGNDH 589
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
G +G DTF S +I F + + D L
Sbjct: 590 LWGGAGRDTFVLSEGSGYDRIRDFRDG-VDRIQVGAGVDNLR 630
>gi|28199957|ref|NP_780271.1| hemolysin-type calcium binding protein [Xylella fastidiosa
Temecula1]
gi|182682713|ref|YP_001830873.1| peptidase M23 [Xylella fastidiosa M23]
gi|28058088|gb|AAO29920.1| hemolysin-type calcium binding protein [Xylella fastidiosa
Temecula1]
gi|182632823|gb|ACB93599.1| Peptidase M23 [Xylella fastidiosa M23]
Length = 999
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/273 (15%), Positives = 81/273 (29%), Gaps = 18/273 (6%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
++ SD+ +S N + + I D G+G + +
Sbjct: 651 TLGSDLLVGTSGNDLIRGGGNGEGNDILIGKGGNDELSGGLGDDILDGGTGNDVL----- 705
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
S G Y + D S + T + +
Sbjct: 706 -----SGGTGNDTYRLAIGAGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVI 760
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTI------YDSGGDDLLDLTLIGGVKNYIDLNT 247
YG ++ D+ Q + +D ++ N I
Sbjct: 761 KYGTGDQLTISS--YFHPGFSDAKIEQFMFSDGVTWDEAAIKARVISNGDASNNTIIGYK 818
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ + I G + N I + + + G +GND++ G + SGNDV G +G DT+
Sbjct: 819 DGSNRIYGLDGNDEIYGGALDDMLYGGAGNDMLSGGKGADTLDGGSGNDVLYGGTGNDTY 878
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + +I ++ D Q +
Sbjct: 879 RFAIGAGVDRIEDYDTTTGNADVLSIGQGVSIN 911
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/266 (13%), Positives = 69/266 (25%), Gaps = 71/266 (26%)
Query: 249 SWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G N I + ++G GND + G +++ +GNDV G +G D
Sbjct: 653 GSDLLVGTSGNDLIRGGGNGEGNDILIGKGGNDELSGGLGDDILDGGTGNDVLSGGTGND 712
Query: 306 TFFYYAPSYLYKIYRFEN-------------------------AIIVYDANEHKQDFLSD 340
T+ + + +I ++ +V Q +S
Sbjct: 713 TYRLAIGAGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKYGTGDQLTISS 772
Query: 341 ----------VERLRFAD-----------------------------QCIDSVNVKQRSI 361
+E+ F+D +
Sbjct: 773 YFHPGFSDAKIEQFMFSDGVTWDEAAIKARVISNGDASNNTIIGYKDGSNRIYGLDGNDE 832
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ A + L G D+ K G D+ + D R G+
Sbjct: 833 IYGGALDDMLYGGAGNDMLSGGKGADTLDGGSGNDVLYGGTG----NDTYRFAIGAGVDR 888
Query: 422 AARHYITHGVKEGRNPDAFKALEYIA 447
+ T G + + ++ +
Sbjct: 889 IEDYDTTTGNADVLSIGQGVSINQLW 914
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 42/321 (13%), Positives = 73/321 (22%), Gaps = 51/321 (15%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
W++IG ++ A + SS V++ + + + G+D+ G+SG D
Sbjct: 609 GWNAIGFLADQLSAAPDMEGFN-RESSSWTVILYAANEHYLPGTLGSDLLVGTSGND--- 664
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+I N D L + IL+
Sbjct: 665 ----------------LIRGGGNGEGNDILIG------KGGNDELSGGLGDDILDGGTGN 702
Query: 369 EDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L G D S+ D + Y
Sbjct: 703 DVLSGGTGNDTYRLAIGAGVDRIEDSDSTPGNTDVVRFADVASTALTALERKDNDLVIKY 762
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ F A E + + D + SN + +
Sbjct: 763 G--TGDQLTISSYFHPGFSDAKIEQFMFSDGVTWDEAAIKARVISNGDASNNTIIGYKD- 819
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
+ R Y G E L A ++ L
Sbjct: 820 ------------------GSNRIYGLDGNDEIYGGALDDMLYGGAGNDMLSGGKGADTLD 861
Query: 547 VQAGKDHFSNFGYEEGRSITF 567
+G D +G + F
Sbjct: 862 GGSGND--VLYGGTGNDTYRF 880
>gi|73995874|ref|XP_543534.2| PREDICTED: similar to matrix metalloproteinase 11 preproprotein
[Canis familiaris]
Length = 489
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 64/199 (32%), Gaps = 52/199 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 101 LSGGRWDKTDLTYRILRFPWQLVREQV-------RQTVAEALQVWSEVTPLTFTEVHEGR 153
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G +GT L
Sbjct: 154 ADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGNNQGTDLL 211
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H + ++MS +F Y
Sbjct: 212 QVAAHEFGHTLGLQHT-------------------TAAKALMS--------PFYTFRYPL 244
Query: 182 TPMVSDIVAVQKIYGAPKG 200
+ D +Q +YG P+
Sbjct: 245 SLSPDDRRGIQHLYGQPRT 263
>gi|298368478|ref|ZP_06979796.1| bifunctional hemolysin/adenylate cyclase [Neisseria sp. oral taxon
014 str. F0314]
gi|298282481|gb|EFI23968.1| bifunctional hemolysin/adenylate cyclase [Neisseria sp. oral taxon
014 str. F0314]
Length = 400
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 54/171 (31%), Gaps = 1/171 (0%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
T+ G + I I G + N T+ +++ G G D + G S N+
Sbjct: 132 TIYGTSGDDIIYGQGGADVIYGGDGNDTLNGGNNGDTLYGEGGKDYLQGGSGNDYLNGGE 191
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCID 352
G D+ G G D ++ P + K + N+ I + +VE L ++
Sbjct: 192 GADIMLGGDGNDVYYVDNPGDIVKEFANVNSGIDTVRSTIDYTLPDNVENLYLQGSGNLN 251
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + + L + G D G D+
Sbjct: 252 GTGNALDNTINGNSGNNHLYGLAGDDCLVGKDGRDFLDGGIGNDVLIGGAG 302
Score = 39.0 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 25/187 (13%), Positives = 40/187 (21%), Gaps = 37/187 (19%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+I V SG IG + + +SG+D+ G G D +
Sbjct: 109 GNIINVVASESGPSKTIGTEQKDTIYGTSGDDIIYGQGGADVIY---------------- 152
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L + L G D +
Sbjct: 153 ---------------------GGDGNDTLNGGNNGDTLYGEGGKDYLQGGSGNDYLNGGE 191
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+G D+ + + G D + Y E L
Sbjct: 192 GADIMLGGDGNDVYYVDNPGDIVKEFANVNSGIDTVRSTIDYTLPDNVENLYLQGSGNLN 251
Query: 445 YIASHED 451
+ D
Sbjct: 252 GTGNALD 258
Score = 38.2 bits (87), Expect = 5.1, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 78/283 (27%), Gaps = 38/283 (13%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+S I ++ D G I I G N G +YG
Sbjct: 113 NVVASESGPSKTIGTEQKDTIYGTSGDDIIYGQGGADVIYGGDGNDTLNGGNNGDTLYGE 172
Query: 150 DN-DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
DY ++ D M+ + G+ + +
Sbjct: 173 GGKDYLQGGSGNDYLNGGEGADIMLGGDGNDVY----------------YVDNPGDIVKE 216
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+++ D D ++ + G N ++I G N +
Sbjct: 217 FANVNSGIDTVRSTIDYTLPDNVENLYLQGSGNLNGTGNALDNTINGNSGNNHLYGLAGD 276
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFD-----------GSSGLDTFFYYAPSYLYK 317
+ +VG G D + G N+V +G+D + SSG DT +
Sbjct: 277 DCLVGKDGRDFLDGGIGNDVLIGGAGDDTYFFAKGYGHDIIQDSSGNDTLCFGQGITASD 336
Query: 318 IYRFENAIIVYDANEHKQDFL----------SDVERLRFADQC 350
+ ++ + + D + + VE FAD
Sbjct: 337 LILSKSGDDLSIKFKGSNDSVLVDDWFANDSNKVENFSFADGS 379
>gi|325135819|gb|EGC58431.1| iron-regulated protein FrpA [Neisseria meningitidis M0579]
Length = 828
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/258 (15%), Positives = 78/258 (30%), Gaps = 11/258 (4%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 464 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 523
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 524 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 583
Query: 188 --IVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y +Y + G+DLL+ G N
Sbjct: 584 VLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLN----GDAGNDS 639
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 640 IYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 699
Query: 304 LDTFFYYAPSYLYKIYRF 321
DT+ + +Y +
Sbjct: 700 SDTYVFGEGFGQDTVYNY 717
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 76/288 (26%), Gaps = 60/288 (20%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 469 GHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 528
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV- 354
+ V ++ ++ + F + + V
Sbjct: 529 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 588
Query: 355 --------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L S L +G D G D +Y G
Sbjct: 589 TVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLNGDAGND-----SIYSG 643
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ +D N + Y +G + L ++ LI + G
Sbjct: 644 NGNDTLNGGEGNDAL----YGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 699
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
D + EG ++ D AA H+I G
Sbjct: 700 SDTYVFG---EGFGQDTVYNYHVDKNSDTM--HFKGFKAADVHFIRSG 742
>gi|325127694|gb|EGC50606.1| iron-regulated protein frpA [Neisseria meningitidis N1568]
Length = 810
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/258 (15%), Positives = 78/258 (30%), Gaps = 11/258 (4%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 446 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGR 505
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 506 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 565
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + G+DLL+ G N
Sbjct: 566 VLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGNDLLN----GDAGNDS 621
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + + + G GND + G N+ +GND +G SG
Sbjct: 622 IYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 681
Query: 304 LDTFFYYAPSYLYKIYRF 321
DT+ + +Y +
Sbjct: 682 SDTYVFGEGFGQDTVYNY 699
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 76/288 (26%), Gaps = 60/288 (20%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 451 GHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGRKDIIR 510
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV- 354
+ V ++ ++ + F + + V
Sbjct: 511 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 570
Query: 355 --------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L S L +G D G D +Y G
Sbjct: 571 TVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGNDLLNGDAGND-----SIYSG 625
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ +D N + Y +G + L ++ LI + G
Sbjct: 626 NGNDTLNGGEGNDAL----YGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 681
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
D + EG ++ D AA H+I G
Sbjct: 682 SDTYVFG---EGFGQDTVYNYHVDKNSDTM--HFKGFKAADVHFIRSG 724
>gi|323139303|ref|ZP_08074356.1| hypothetical protein Met49242DRAFT_3744 [Methylocystis sp. ATCC
49242]
gi|322395451|gb|EFX97999.1| hypothetical protein Met49242DRAFT_3744 [Methylocystis sp. ATCC
49242]
Length = 746
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 72/224 (32%), Gaps = 44/224 (19%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
+ F+ Y +Y ++R + HY+ G G NP+ F + Y+ + D+
Sbjct: 129 NPLFNEPWYFSTYPEIREL----GLDPYFHYLRIGGFSGYNPNPLFDSAWYLREYADVRA 184
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ + +H+ G EGR + FG D G Y ++
Sbjct: 185 SLINP-------LEHYYLSGVTEGRDPS--------------PSFGDDPGIPDFFYNSYH 223
Query: 515 VKEGRNPDA-----------FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
R F YIA + + + H+ G G
Sbjct: 224 RLLSRPDIDPACPLGIIRKEFDKQFYIARYLN----APENRKWRAWPFLHYFYIGARHGY 279
Query: 564 SIT--FNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGRA 604
S F+ + Y+ Y D+ HY+ G KEGR+
Sbjct: 280 SPNDSFSEEFYVNLYKDVREAIARKEIRSGFWHYLATGKKEGRS 323
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/191 (23%), Positives = 67/191 (35%), Gaps = 30/191 (15%)
Query: 385 HFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-- 440
H+ G G + FDS YL Y D+R HY GV EGR+P
Sbjct: 154 HYLRIGGFSGYNPNPLFDSAWYLREYADVRASL----INPLEHYYLSGVTEGRDPSPSFG 209
Query: 441 -----KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
Y + H L D + + + FD Y+ Y +
Sbjct: 210 DDPGIPDFFYNSYHRLLSRPDIDPACPLGIIRKE-------------FDKQFYIARYLNA 256
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHF 554
R HY G + G +P+ F Y+ ++D+ A A +++G H+
Sbjct: 257 PENRKW-RAWPFLHYFYIGARHGYSPNDSFSEEFYVNLYKDVREAIA--RKEIRSGFWHY 313
Query: 555 SNFGYEEGRSI 565
G +EGRS
Sbjct: 314 LATGKKEGRSC 324
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 29/87 (33%), Gaps = 13/87 (14%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWN 581
F Y +++ + I P H+ G G + F+ YL Y D+
Sbjct: 132 FNEPWYFSTYPE-IRELGLDPYF------HYLRIGGFSGYNPNPLFDSAWYLREYADVRA 184
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGIS 608
+HY G+ EGR S
Sbjct: 185 ----SLINPLEHYYLSGVTEGRDPSPS 207
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 57/191 (29%), Gaps = 29/191 (15%)
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
LR + N S + +I ++H+Y G++EGRD +
Sbjct: 153 FHYLRIGGFSGYNPNPLFDSAWYLREYADVRASLI-----NPLEHYYLSGVTEGRDPSPS 207
Query: 401 -------SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
+ SY L + D G F YIA +
Sbjct: 208 FGDDPGIPDFFYNSYHRLLSRPDIDPACPL----------GIIRKEFDKQFYIARYL--- 254
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFG-SDRGAAARHY 510
+ H+ G G +F Y+ Y D+R + + HY
Sbjct: 255 -NAPENRKWRAWPFLHYFYIGARHGYSPNDSFSEEFYVNLYKDVREAIARKEIRSGFWHY 313
Query: 511 ITHGVKEGRNP 521
+ G KEGR+
Sbjct: 314 LATGKKEGRSC 324
>gi|218528821|ref|YP_002419637.1| hypothetical protein Mchl_0790 [Methylobacterium chloromethanicum
CM4]
gi|218521124|gb|ACK81709.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 294
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 40/132 (30%), Gaps = 21/132 (15%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
FD+ Y + HY G + RNP+ F Y
Sbjct: 29 FDAAYYRERNPGVARSGLD----PFLHYAWFGARRDRNPNADFDTAFYRRQSG------- 77
Query: 542 DAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
H+ G +G S F+ LYL Y D+ QH+ T G
Sbjct: 78 ---RTRLDPLRHYGQVGAAQGLDPSPGFSTSLYLARYPDVVAA----GVNPLQHFRTDGR 130
Query: 600 KEGRALGISGMQ 611
EGR S ++
Sbjct: 131 AEGREAAPSPIE 142
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 48/154 (31%), Gaps = 29/154 (18%)
Query: 394 GRDI-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHED 451
GR FD+ Y HY G + RNP+ F Y
Sbjct: 23 GRVPKLFDAAYYRERNP----GVARSGLDPFLHYAWFGARRDRNPNADFDTAFYRRQS-- 76
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
H+ G +G F + LYL Y D+ + +H
Sbjct: 77 --------GRTRLDPLRHYGQVGAAQGLDPSPGFSTSLYLARYPDVVAAGVN----PLQH 124
Query: 510 YITHGVKEGR-------NPDAFKALEYIASHEDL 536
+ T G EGR PD +AL+ +A + L
Sbjct: 125 FRTDGRAEGREAAPSPIEPDRLRALDGVAENHRL 158
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 14/98 (14%)
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYL 403
F + + N + S G+ + ++H+ + G ++G D + F + L
Sbjct: 55 FGARRDRNPNADFDTAFYRRQS--------GRTRLDPLRHYGQVGAAQGLDPSPGFSTSL 106
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
YL Y D+ +H+ T G EGR
Sbjct: 107 YLARYPDVVAA----GVNPLQHFRTDGRAEGREAAPSP 140
>gi|325129718|gb|EGC52529.1| Iron-regulated protein frpA [Neisseria meningitidis OX99.30304]
Length = 601
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/258 (15%), Positives = 78/258 (30%), Gaps = 11/258 (4%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 237 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 296
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 297 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 356
Query: 188 --IVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y +Y + G+DLL+ G N
Sbjct: 357 VLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLN----GDAGNDS 412
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 413 IYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 472
Query: 304 LDTFFYYAPSYLYKIYRF 321
DT+ + +Y +
Sbjct: 473 SDTYVFGEGFGQDTVYNY 490
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 76/288 (26%), Gaps = 60/288 (20%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 242 GHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 301
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV- 354
+ V ++ ++ + F + + V
Sbjct: 302 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 361
Query: 355 --------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L S L +G D G D +Y G
Sbjct: 362 TVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGNDLLNGDAGND-----SIYSG 416
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ +D N + Y +G + L ++ LI + G
Sbjct: 417 NGNDTLNGGEGNDAL----YGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 472
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
D + EG ++ D AA H+I G
Sbjct: 473 SDTYVFG---EGFGQDTVYNYHVDKNSDTM--HFKGFKAADVHFIRSG 515
>gi|241758688|ref|ZP_04756801.1| bifunctional hemolysin/adenylate cyclase [Neisseria flavescens
SK114]
gi|241320896|gb|EER57109.1| bifunctional hemolysin/adenylate cyclase [Neisseria flavescens
SK114]
Length = 353
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 66/241 (27%), Gaps = 15/241 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+N Y E + + + G D+ D + G I I
Sbjct: 48 DDHNQDNSYGHEDKNPGNVIRPNVIR--GTDVKDT-IYGTAGEDIIYGGNGADVIYAGAG 104
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N TI +S+ G G D + G N+ SG D+ G G D +F
Sbjct: 105 NDTIYGDADGDSLYGEEGKDYLQGGDGNDYLNGGSGADIMRGGDGNDVYFVDDADDQVIE 164
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ----------RSILEYTASY 368
Y N I +VE L + + L A
Sbjct: 165 YGNLNGGIDTVRTVIDYTLTDNVENLFLQGMQNLNGTGNSLNNNIEGNGGNNHLYGLAGD 224
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L+ G D + G D F Y +D +R G+D +
Sbjct: 225 DCLVGKDGNDYLDGGVGNDILIGGTGNDTYFFDKGYG--HDTIREESGNDTLLFGKGIAA 282
Query: 429 H 429
Sbjct: 283 S 283
Score = 41.3 bits (95), Expect = 0.59, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 74/268 (27%), Gaps = 18/268 (6%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN-DYENDSFLTS 161
D D G+ I N I G G +YG + DY
Sbjct: 74 GTDVKDTIYGTAGEDIIYGGNGADVIYAGAGNDTIYGDADGDSLYGEEGKDYLQGGDGND 133
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQK--IYGAPKGSLGNNIYKIEVQQKDSPFI 219
++ D M +D ++ + G Y + ++
Sbjct: 134 YLNGGSGADIMRGGDGNDVYFVDDADDQVIEYGNLNGGIDTVRTVIDYTLTDNVENLFLQ 193
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+G + L+ + G N + G + N + + ++G +GND
Sbjct: 194 GMQNLNGTGNSLNNNIEGNGGNNHLYGLAGDDCLVGKDGNDYLDGGVGNDILIGGTGNDT 253
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F + G+D SG DT + + ++ + + +
Sbjct: 254 YF-------FDKGYGHDTIREESGNDTLLFGKGIAASDVLLSKSGANLTVSVGSDSITID 306
Query: 340 D--------VERLRFADQCIDSVNVKQR 359
D VE +FAD V
Sbjct: 307 DWFTGNNHKVENFKFADGSTYQVTGHGD 334
Score = 39.4 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 29/213 (13%), Positives = 58/213 (27%), Gaps = 30/213 (14%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+V+ G + + ++G D+ G +G D YA + IY + +Y
Sbjct: 70 NVIRGTDVKDTIYGTAGEDIIYGGNGAD--VIYAGAGNDTIYGDADGDSLY--------- 118
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ + L+ + L G D+ + + + D
Sbjct: 119 -----------------GEEGKDYLQGGDGNDYLNGGSGADIMRGGDGNDVYFVDDADDQ 161
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG--VKEGRNPDAFKALEYIASHEDLINA 455
+ G D +R V + G G +E + L
Sbjct: 162 VIEYGNLNGGIDTVRTVIDYTLTDNVENLFLQGMQNLNGTGNSLNNNIEGNGGNNHLYGL 221
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
D + + G D+ + + Y
Sbjct: 222 AGDDCLVGKDGNDYLDGGVGNDILIGGTGNDTY 254
>gi|323137764|ref|ZP_08072840.1| proprotein convertase P [Methylocystis sp. ATCC 49242]
gi|322397061|gb|EFX99586.1| proprotein convertase P [Methylocystis sp. ATCC 49242]
Length = 606
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 52/331 (15%), Positives = 98/331 (29%), Gaps = 14/331 (4%)
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA--PK 199
G P N + + ++ S ++ ++ + G+
Sbjct: 280 EGGPGNDSINGAAGSDTASYENASSRVVVNLALTSAQNTIGAGTDTLLQIENLRGSRFND 339
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+GNN + P +I G D + ++IG
Sbjct: 340 TLIGNN---GPNVIEGGPGNDSINGGAGFDTASYEHANARVVVNLSIAGAQNTIGAGVDT 396
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ T IE+++GSS ND +IGN NV GND +G +G+DT Y + +
Sbjct: 397 L-----TSIENLIGSSFNDTLIGNGGPNVIEGGPGNDSINGGAGIDTVSYLHATARVVVN 451
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D L+ +E + +++E A + + +G+D
Sbjct: 452 LSIVGAQNTQG--AGVDTLTAIENIVGTPFNDVLTGNNLANVIEGGAGKDIVRGGLGRDT 509
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
F + + RD+ D + DL V + + + G
Sbjct: 510 FVFARLTD-MSVGPNRDVIVDFTSGVDRI-DLWRVDANTSQPGDQSFTYIGASGFSGTPG 567
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHF 470
D+ ++ G
Sbjct: 568 QLRFSGGILSGDVDGNRTADFEIALTGVSTL 598
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 58/175 (33%), Gaps = 7/175 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + I G D T +++G + I
Sbjct: 204 GDDNIEGRTGKNRIDGGPGSDTASYTRARSRVAVNLALAGPQNTLGAGIDTLL-----QI 258
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+++GS+ ND ++GN+ N+ GND +G++G DT Y S + +
Sbjct: 259 ENLIGSAFNDTLVGNAGANIIEGGPGNDSINGAAGSDTASYENASSRVVVNLALTSAQNT 318
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
D L +E LR + + +++E + + G D
Sbjct: 319 IG--AGTDTLLQIENLRGSRFNDTLIGNNGPNVIEGGPGNDSINGGAGFDTASYE 371
>gi|188584260|ref|YP_001927705.1| Hemolysin-type calcium-binding region [Methylobacterium populi
BJ001]
gi|179347758|gb|ACB83170.1| Hemolysin-type calcium-binding region [Methylobacterium populi
BJ001]
Length = 782
Score = 78.3 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/250 (18%), Positives = 80/250 (32%), Gaps = 41/250 (16%)
Query: 126 HEIGHALG-LMHPGS--------YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
HEIGHALG + P + +NG + D + V+ D +
Sbjct: 129 HEIGHALGFIDFPATKAANGALVFNGENTRTVLGGPALLDGSRSHVVGREDLMDPYSNWG 188
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
+ + D+ +Q + I+ T + GGDD +D
Sbjct: 189 GRSGISDL--DLAMLQDKGMPIATERTDKIWLGNR-------ADTFFGYGGDDWID---- 235
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + +++ G GND + G N+ +G+D
Sbjct: 236 ------------------GGRGDDKLFGGLGNDTLSGGDGNDALDGGEGNDTLSGGNGSD 277
Query: 297 VFDGSSGLDTFFYYAPSYLY-KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
DG +G D + S Y +Y A+ + D L+ +E L F D +
Sbjct: 278 TLDGGAGTDRAVFAGRSQDYVALYGATGALALKHLASGSIDTLTSIETLTFDDTVLGVPG 337
Query: 356 VKQRSILEYT 365
+ Y
Sbjct: 338 LLAHLQQRYG 347
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 18/173 (10%), Positives = 43/173 (24%), Gaps = 20/173 (11%)
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-- 398
+++ ++ ++ + L +G D EG D
Sbjct: 213 TDKIWLGNRADTFFGYGGDDWIDGGRGDDKLFGGLGNDTLSGGDGNDALDGGEGNDTLSG 272
Query: 399 ------------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
D ++ G D ++G+ A +H + + + + + +
Sbjct: 273 GNGSDTLDGGAGTDRAVFAGRSQDYVALYGATGALALKHLASGSIDTLTSIETLTFDDTV 332
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
L+ Q GK + Y ++ F
Sbjct: 333 LGVPGLLAHLQQRYGTTQAGKAPYEMALNAAS------DEAYRAEIPEIDGAF 379
>gi|323137036|ref|ZP_08072116.1| hypothetical protein Met49242DRAFT_1503 [Methylocystis sp. ATCC
49242]
gi|322397797|gb|EFY00319.1| hypothetical protein Met49242DRAFT_1503 [Methylocystis sp. ATCC
49242]
Length = 1174
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 48/293 (16%), Positives = 75/293 (25%), Gaps = 69/293 (23%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
+ + G D +H+ E G EGRD F + YL + +
Sbjct: 405 LVDPAFYLAKNLDV--AGAGVDPV---EHYRENGWREGRDPNGWFSTQWYLSHSNIPEDA 459
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
H++ G G P + D + + F +
Sbjct: 460 ------RPLEHFVRVGAAAGLAPHPDADIA-----RDAAQRVGAYKARAEALRRRFGDAD 508
Query: 475 CEEGRFV-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEY--- 529
+ D YLG Y D+ HY G +E R+P+ F Y
Sbjct: 509 SGQSLVDRLIDPEFYLGKYPDVAAAG----ADPVEHYRGSGWREERDPNRLFCTGWYRAL 564
Query: 530 ---------------------IASHEDLI-----NAFADAPDLVQAGKDHFSNFGYEEGR 563
+A H D+ A + + G
Sbjct: 565 PGVPQDVCPLEHFVQVGAAMGLAPHPDVNLVHFSLAHLNERWPRAEALLYLLEQSRASGA 624
Query: 564 SITFNP------------DLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
+P YL ++ D+ HY+ G EGRA
Sbjct: 625 VADIDPASPAVLARLVDRSWYLETHADVAAA----GCDPVAHYLEAGQFEGRA 673
Score = 77.9 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 52/290 (17%), Positives = 85/290 (29%), Gaps = 72/290 (24%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGA 421
Y +Y D+ ++ H+ G EGRD F + Y + +
Sbjct: 774 YRTAYPDIAAAD----VDAFDHYMVTGWREGRDPNPWFAAAWYRKANGIEPLCEAPE--- 826
Query: 422 AARHYITHGVKEGRNPDA----------------------------FKALEYIASHED-- 451
H++ G G +P +I D
Sbjct: 827 -LSHFVRVGAARGLSPHPDLDLARYAQIHFGEPASARALAHLVKNWSDPAFWIFPELDHP 885
Query: 452 LINAFADAPDL-------------VQVGKDHFSNFGCEEGRFVTF-DSYLYLGSYDDLRN 497
+ AF E FV F D+ Y Y D+
Sbjct: 886 FVAAFLADLGPVARRAQIIRLMRLTHPLAAPAEVAVGEASPFVAFVDTDWYHAHYPDVEA 945
Query: 498 VFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
A Y+ G + GR+P AF + Y+ ++ ++ A + +
Sbjct: 946 SG----ATPAADYLESGWRIGRDPSPAFSTIWYLDNYPEVAAA-------GVCPLEDYVI 994
Query: 557 FGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
G +GR F+ + Y Y N+ + AA Y+T G + GRA
Sbjct: 995 GGARDGRRPDEIFDREWYARRY----NLKSAAPDAALLDYVTTGWRRGRA 1040
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 62/365 (16%), Positives = 95/365 (26%), Gaps = 98/365 (26%)
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE---YT 365
+ + +A I DA + + + E LR DS +++ Y
Sbjct: 465 FVRVGAAAGLAPHPDADIARDAAQRVGAYKARAEALRRRFGDADSGQSLVDRLIDPEFYL 524
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLY------------------- 404
Y D + G D +H+ G E RD F + Y
Sbjct: 525 GKYPD-VAAAGADPV---EHYRGSGWREERDPNRLFCTGWYRALPGVPQDVCPLEHFVQV 580
Query: 405 -----LGSYDDLRNVF------------GSDRGAAARHYITHGVKEGRNPDAFKALE--- 444
L + D+ V G +P + L
Sbjct: 581 GAAMGLAPHPDVNLVHFSLAHLNERWPRAEALLYLLEQSRASGAVADIDPASPAVLARLV 640
Query: 445 ----YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNV 498
Y+ +H D+ A D H+ G EGR F Y
Sbjct: 641 DRSWYLETHADVAAAGCDP-------VAHYLEAGQFEGRAPNPWFLPDFYCEK------A 687
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
S A H++ G G P Y A + + A H +
Sbjct: 688 GLSGDTPALAHFVRSGAAAGVPPHPAVDLCFYAARY------LGQDSPSI-AAYQHLLDS 740
Query: 558 GYEEGRSITFN-------------------PDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
E ++ + D Y T+Y D+ A HY+ G
Sbjct: 741 WRTEDAQLSPDCNPRPLTLTEERSLRRLVAADWYRTAYPDIAAA----DVDAFDHYMVTG 796
Query: 599 MKEGR 603
+EGR
Sbjct: 797 WREGR 801
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 46/127 (36%), Gaps = 18/127 (14%)
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD 458
D+ Y Y D+ A Y+ G + GR+P F + Y+ ++ ++ A
Sbjct: 932 DTDWYHAHYPDVEAS----GATPAADYLESGWRIGRDPSPAFSTIWYLDNYPEVAAAGVC 987
Query: 459 APDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
+ + G +GR FD Y Y+ AA Y+T G +
Sbjct: 988 P-------LEDYVIGGARDGRRPDEIFDREWYARRYNLKSAA----PDAALLDYVTTGWR 1036
Query: 517 EGRNPDA 523
GR P A
Sbjct: 1037 RGRAPSA 1043
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 44/129 (34%), Gaps = 21/129 (16%)
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNV 498
Y A + D+ + A + G GR + F + YL +Y ++
Sbjct: 932 DTDWYHAHYPDVEASGATPA-------ADYLESGWRIGRDPSPAFSTIWYLDNYPEVAAA 984
Query: 499 FGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
Y+ G ++GR PD F Y + L +A D A +
Sbjct: 985 G----VCPLEDYVIGGARDGRRPDEIFDREWYARRYN-LKSAAPD------AALLDYVTT 1033
Query: 558 GYEEGRSIT 566
G+ GR+ +
Sbjct: 1034 GWRRGRAPS 1042
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/250 (16%), Positives = 64/250 (25%), Gaps = 33/250 (13%)
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADA 459
+ Y +Y D+ A HY+ G +EGR+P+ F A Y ++
Sbjct: 771 ADWYRTAYPDIAAA----DVDAFDHYMVTGWREGRDPNPWFAAAWYRKAN-------GIE 819
Query: 460 PDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
P HF G G D Y + A H + +
Sbjct: 820 PLCEAPELSHFVRVGAARGLSPHPDLDLARYAQIHF-----GEPASARALAHLVKNWSDP 874
Query: 518 GRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNF----GYEEGRSIT--FNPD 570
A DL A + H E + D
Sbjct: 875 AFWIFPELDHPFVAAFLADLGPVARRAQIIRLMRLTHPLAAPAEVAVGEASPFVAFVDTD 934
Query: 571 LYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKA---D 627
Y Y D+ + A Y+ G + GR + + N E + +
Sbjct: 935 WYHAHYPDVEASGAT----PAADYLESGWRIGRDPSPAFSTIWYLDNYPEVAAAGVCPLE 990
Query: 628 LSLSFDHKKV 637
+ +
Sbjct: 991 DYVIGGARDG 1000
>gi|255264091|ref|ZP_05343433.1| hemolysin-type calcium-binding region [Thalassiobium sp. R2A62]
gi|255106426|gb|EET49100.1| hemolysin-type calcium-binding region [Thalassiobium sp. R2A62]
Length = 664
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 56/205 (27%), Gaps = 26/205 (12%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+D ++ GG + +I G N TI + +++ G +G D + G S
Sbjct: 275 PGNDTIN----GGGGQDTIFGQQGNDTIDGGSGNDTIDGGSGNDTIQGGTGQDTIEGGSG 330
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N++ GND G SG DT D L+
Sbjct: 331 NDIVDGGEGNDQISGGSGEDTI-------------DGGQGQDTLGGGEGNDTLTG----- 372
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES-MKHFYEFGLSEGRDITFDSYLY 404
D L + G D+F + E D
Sbjct: 373 -GDGDDTLRGGLGEDTLNVGGDNDTAEGGFGSDLFVVTEAGNHTIIGGE--DPDGSDIDV 429
Query: 405 LGSYDDLRNVFGSDRGAAARHYITH 429
L N+ + A ++
Sbjct: 430 LNLSGLNVNIIRTGPEAGRVEFLDD 454
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 59/193 (30%), Gaps = 34/193 (17%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ + +I+ S+ G+ N + V+E +V GND + G + F
Sbjct: 235 FSAEFENREFIEFTLSPRSTQSGFSMNGDLIDDAVVEPLV--PGNDTINGGGGQDTIFGQ 292
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
GND DG SG DT S I +
Sbjct: 293 QGNDTIDGGSGNDTI--DGGSGNDTIQGGTGQDTI------------------------- 325
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----TFDSYLYLGSY 408
I++ + + G+D + + G EG D D L G
Sbjct: 326 -EGGSGNDIVDGGEGNDQISGGSGEDTIDGGQGQDTLGGGEGNDTLTGGDGDDTLRGGLG 384
Query: 409 DDLRNVFGSDRGA 421
+D NV G + A
Sbjct: 385 EDTLNVGGDNDTA 397
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 45/395 (11%), Positives = 93/395 (23%), Gaps = 33/395 (8%)
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY-GAP 198
NG G D + + + Y ++++ S T V ++VA G
Sbjct: 25 GNGADIASGEGGDDLINGGEGNDILYGDAGENVVPGSDATPLTMAVGNVVAGSDTSTGNN 84
Query: 199 KGSLGN-----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G+ ++ +E S + + S + +D++ G + ++ +
Sbjct: 85 AADPGDSVVYRDVATLEDGTSVSGRLVLVSVSNDNMPVDISGGPGFEILLNSGASGNAGF 144
Query: 254 GGYEKNMTIAQHT-VIESVVGS---SGNDVVIGNSANNVFFESSGNDVFDG------SSG 303
G + + + N N + + DG
Sbjct: 145 AGETATFRMEFFVPSSPNATTGTPIALNSTATFNDLDRNTNGTVETVQVDGNSFSQFGVA 204
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA---------------- 347
DT + D + + E + F
Sbjct: 205 DDTSLAVTTTGGTVTASGGEFNSPDDQDAWFSAEFENREFIEFTLSPRSTQSGFSMNGDL 264
Query: 348 -DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
D + V + + + G D + G D
Sbjct: 265 IDDAVVEPLVPGNDTINGGGGQDTIFGQQGNDTIDGGSGNDTIDGGSGNDTIQGGTGQDT 324
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
N + G L ++ L D +G
Sbjct: 325 IEGGSGNDIVDGGEGNDQISGGSGEDTIDGGQGQDTLGGGEGNDTLTGGDGDDTLRGGLG 384
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
+D + G + F S L++ + + G
Sbjct: 385 EDTLNVGGDNDTAEGGFGSDLFVVTEAGNHTIIGG 419
Score = 42.1 bits (97), Expect = 0.35, Method: Composition-based stats.
Identities = 30/321 (9%), Positives = 80/321 (24%), Gaps = 29/321 (9%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G + I + + +G D+ G +++ GND+ G +G +
Sbjct: 3 DIDGTPNDDQIQGTAEDDIINAGNGADIASGEGGDDLINGGEGNDILYGDAGENVV---P 59
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE- 369
S + ++ + + + + D ++ ++ + S +
Sbjct: 60 GSDATPLTMAVGNVVAGSDTSTGNNAADPGDSVVYRDVATLEDGTSVSGRLVLVSVSNDN 119
Query: 370 ---DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
D+ G ++ G S ++ + + + + A +
Sbjct: 120 MPVDISGGPGFEIL------LNSGASGNAGFAGETATFRMEFFVPSSPNATTGTPIALNS 173
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
RN + + + AD L E
Sbjct: 174 TATFNDLDRNTNGTVETVQVDGNSFSQFGVADDTSLAVTTTGGTVTASGGEFNSPDDQDA 233
Query: 487 LYLGSYDDLR---------------NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
+ +++ ++ G A + G +
Sbjct: 234 WFSAEFENREFIEFTLSPRSTQSGFSMNGDLIDDAVVEPLVPGNDTINGGGGQDTIFGQQ 293
Query: 532 SHEDLINAFADAPDLVQAGKD 552
++ + + +G D
Sbjct: 294 GNDTIDGGSGNDTIDGGSGND 314
>gi|189345973|ref|YP_001942502.1| metallophosphoesterase [Chlorobium limicola DSM 245]
gi|189340120|gb|ACD89523.1| metallophosphoesterase [Chlorobium limicola DSM 245]
Length = 2701
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 46/164 (28%), Gaps = 12/164 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G N ++ + + G +GND + GN ++ GND G G DT++ +
Sbjct: 2425 DFGETTGNDNLSGSRTDDVIYGDAGNDSIAGNDGDDTLIGGVGNDTMQGGRGDDTYYVDS 2484
Query: 312 -----------PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-R 359
+ + + I ++ + +E L
Sbjct: 2485 EGDVVRESSSSFGGFFSFFGNRSGGIDTVKSKVDWQLGTGIENLELLGSDDLDGTGNVLD 2544
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ L L + G D G D+ F
Sbjct: 2545 NELVGNEGDNMLEGLFGNDSLIGNGGDDILDGGWGNDLLFGGEG 2588
Score = 50.6 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 72/302 (23%), Gaps = 49/302 (16%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ + ++ A + + G D G D Y+
Sbjct: 2429 TTGNDNLSGSRTDDVIYGDAGNDSIAGNDGDDTLIGGVGNDTMQGGRG-----DDTYYVD 2483
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
S D+ +E + + + + + G
Sbjct: 2484 SEGDVV-------------------RESSSSFGGFFSFFGNRSGGIDTVKSKVDWQLGTG 2524
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
++ G + D + + + N + G
Sbjct: 2525 IENLELLGSD-----DLDGTGNVLDNELVGNEGDNMLE------GLFGNDSLIGNGGDDI 2573
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
L+ ++ L +G+D F E + D+ + F S
Sbjct: 2574 LDGGWGNDLLFGGEGADLLTGGSGRDIFRYTNASE--------SGFTAETMDIISDFTSR 2625
Query: 587 RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ + +SG Q S + L + L FD + LY + GD
Sbjct: 2626 QDRLDLSGMD------ANSSLSGDQSFSRVILGSSGTFTSAGQLRFDSAEGILYGNTDGD 2679
Query: 647 GN 648
+
Sbjct: 2680 AD 2681
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSSIG--- 254
++ + F SGG D + D L G++N L ++ G
Sbjct: 2484 SEGDVVRESSSSFGGFFSFFGNRSGGIDTVKSKVDWQLGTGIENLELLGSDDLDGTGNVL 2543
Query: 255 -----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G E + + +S++G+ G+D++ G N++ F G D+ G SG D F Y
Sbjct: 2544 DNELVGNEGDNMLEGLFGNDSLIGNGGDDILDGGWGNDLLFGGEGADLLTGGSGRDIFRY 2603
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDF 337
S + I + + + + D
Sbjct: 2604 TNASESGFTAETMDIISDFTSRQDRLDL 2631
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 34/241 (14%), Positives = 67/241 (27%), Gaps = 35/241 (14%)
Query: 194 IYG--APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL------ 245
IYG GN+ + T+ GDD + G V
Sbjct: 2444 IYGDAGNDSIAGND---GDDTLIGGVGNDTMQGGRGDDTYYVDSEGDVVRESSSSFGGFF 2500
Query: 246 -----NTESWSSIGG----------------YEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ ++ ++ + + +VG+ G++++ G
Sbjct: 2501 SFFGNRSGGIDTVKSKVDWQLGTGIENLELLGSDDLDGTGNVLDNELVGNEGDNMLEGLF 2560
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+ + G+D+ DG G D F + L + +A+E +
Sbjct: 2561 GNDSLIGNGGDDILDGGWGNDLLFGGEGADLLTGGSGRDIFRYTNASESGFTAETMDIIS 2620
Query: 345 RFADQCI--DSVNVKQRSILEYTASYE-DLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
F + D + S L S+ ++ G F + D+
Sbjct: 2621 DFTSRQDRLDLSGMDANSSLSGDQSFSRVILGSSGTFTSAGQLRFDSAEGILYGNTDGDA 2680
Query: 402 Y 402
Sbjct: 2681 D 2681
>gi|294675735|ref|YP_003576350.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294474555|gb|ADE83943.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 879
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 54/328 (16%), Positives = 86/328 (26%), Gaps = 40/328 (12%)
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
DS D TI + I G G + G D D
Sbjct: 519 DSLGGGLSGTIGRDTLIGSNRADTIRGLESSDMIQGGGGNDVIFGDRGNDTIAGNDGDDS 578
Query: 155 NDSFL-TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ M+ D++ D + GA +GN
Sbjct: 579 LIGGEGANRMNGGTGNDTLTGGE----------DFDVLNGAAGADSL-VGN---GGNDTL 624
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
T+ G+D+L+ G + + E +GG N T+ +++ G
Sbjct: 625 LGDIGRDTLLGGAGNDVLN----SGGDDDLLSGGEGEDVLGGGAGNDTLLGDAGNDTLRG 680
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+GND + G + NV +G D G +G DT + E
Sbjct: 681 DAGNDRIEGGAGLNVLSGGAGADTLLGGAGNDTLY---------------GGSETGTPED 725
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D LS L + + L G D+ +
Sbjct: 726 LADSLSG------GGGNDALSGGAGADTLRGGSHNDTLRGGSGADLLDGGDGDDWLFGEG 779
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGA 421
G D+ D G+D +
Sbjct: 780 GNDLMTGGAGKDAFLHDGSLGAGTDWIS 807
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 51/302 (16%), Positives = 77/302 (25%), Gaps = 32/302 (10%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++ ++++GS+ D + G ++++ GNDV G G DT
Sbjct: 524 GLSGTIGRDTLIGSNRADTIRGLESSDMIQGGGGNDVIFGDRGNDTIAGNDGDDSLI--- 580
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L+ E +L A + L+ G D
Sbjct: 581 -GGEGANRMNGGTGNDTLTGGEDF---------------DVLNGAAGADSLVGNGGNDTL 624
Query: 381 ESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
G D+ D L G +D+ + G R
Sbjct: 625 LGDIGRDTLLGGAGNDVLNSGGDDDLLSGGEGEDVLGGGAGNDTLL----GDAGNDTLRG 680
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+E A L L G D DS G D L
Sbjct: 681 DAGNDRIEGGAGLNVLSGGAGADTLLGGAGNDTLYGGSETGTPEDLADSLSGGGGNDALS 740
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
G+D H R L+ + L + AGKD F +
Sbjct: 741 GGAGADTLRGGSH-----NDTLRGGSGADLLDGGDGDDWLFGEGGNDLMTGGAGKDAFLH 795
Query: 557 FG 558
G
Sbjct: 796 DG 797
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 44/403 (10%), Positives = 84/403 (20%), Gaps = 47/403 (11%)
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTL 235
G + + D A+ + A + + E P ++ G+D +
Sbjct: 372 GAASGSLRRDGSALDDLLVANTTGR-DTLMGLAGEDVLVSGPGSTVMFGGAGNDTFVIRS 430
Query: 236 IGGVKNYIDLNTESWSSIGGYE---------------KNMTIAQHTVIESVVGSSGNDVV 280
+D + +GG + T IE V + +
Sbjct: 431 SETRHYVMDYSPGDRIDLGGLPMLRSTAQLIATPTDRGLLLSFGGTEIEIVSATGRPLAL 490
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + + + +D L
Sbjct: 491 SDLWSG-----------LSFGLPDRLLVLGEVRGERIVADSLGGGL---SGTIGRDTLIG 536
Query: 341 VER---LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
R +R + ++ + + G D + G D
Sbjct: 537 SNRADTIRGLESSDMIQGGGGNDVIFGDRGNDTIAGNDGDDSLIGGEGANRMNGGTGNDT 596
Query: 398 -----TFDSYLYLGSYDDLRNVFGSDRGAAA---RHYITHGVKEGRNPDAFKALEYIASH 449
FD D L G+D + + N L
Sbjct: 597 LTGGEDFDVLNGAAGADSLVGNGGNDTLLGDIGRDTLLGGAGNDVLNSGGDDDLLSGGEG 656
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
ED++ A L+ + R L + G
Sbjct: 657 EDVLGGGAGNDTLLGDAGNDTLRGDAGNDRIEGGAGLNVLSGGAGADTLLGGAGNDTLYG 716
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G E D +L ++ L + D
Sbjct: 717 GSETGTPE----DLADSLSGGGGNDALSGGAGADTLRGGSHND 755
>gi|163743358|ref|ZP_02150738.1| bifunctional hemolysin-adenylate cyclase precursor [Phaeobacter
gallaeciensis 2.10]
gi|161383352|gb|EDQ07741.1| bifunctional hemolysin-adenylate cyclase precursor [Phaeobacter
gallaeciensis 2.10]
Length = 1603
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 72/242 (29%), Gaps = 15/242 (6%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
R D+ G G + + + G +Y
Sbjct: 1315 ANLIRGSGGADTISGGAGNDLIDGGAGADNLDGGAGFDVLSYE-------GATNGIVLYF 1367
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN---- 204
+ S + +++ + S +F +DI GA G+
Sbjct: 1368 DNPAKGWSSLVADIVNDNVTPSSESIENFEGAVGTSFTDIF--VGNDGANFFKSGDGNDV 1425
Query: 205 -NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ Y + T++ G D+L I L ++ I +
Sbjct: 1426 ISAYGGDDTIHGGEGTDTLHGGDGFDVLSYEGHSTAV-RIKLTEQTSEFIPSPTNYVAGD 1484
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ E V+GS +D + G + N+ +GND G G DTF + A + +I F
Sbjct: 1485 HISGFEGVIGSDFDDDLNGTAGRNLLEGGAGNDRLSGGDGFDTFVFRAGHGMDRITDFTV 1544
Query: 324 AI 325
Sbjct: 1545 GE 1546
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/301 (15%), Positives = 81/301 (26%), Gaps = 21/301 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
N+ + D+ +GG L + +++ + S++ + G
Sbjct: 1247 ATHRDNDDSQYSSTFADALGQARDAQTGGAV-LTAEGLATLEDMLANRDGSYNVLLGDAG 1305
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + GS G D + G + N++ +G D DG +G D Y + +
Sbjct: 1306 QNKLVGDMDANLIRGSGGADTISGGAGNDLIDGGAGADNLDGGAGFDVLSYEGATNGIVL 1365
Query: 319 YRFEN--------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
Y A IV D + + + E V + + +
Sbjct: 1366 YFDNPAKGWSSLVADIVNDNVTPSSESIENFEGAVGTSFTDIFVGNDGANFFKSGDGNDV 1425
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH- 429
+ G D + +G FD Y G +R +
Sbjct: 1426 ISAYGGDDTIHGGEGTDTLHGGDG----FDVLSYEGHSTAVRIKLTEQTSEFIPSPTNYV 1481
Query: 430 ------GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN-FGCEEGRFVT 482
G + D L A L + G D F G R
Sbjct: 1482 AGDHISGFEGVIGSDFDDDLNGTAGRNLLEGGAGNDRLSGGDGFDTFVFRAGHGMDRITD 1541
Query: 483 F 483
F
Sbjct: 1542 F 1542
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 56/517 (10%), Positives = 134/517 (25%), Gaps = 35/517 (6%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S D + + + + + + + + DV+ + + H +
Sbjct: 1048 SGEDDYLYGGAGDDHFTYSQIGGGNDILVGGEGRDVYNITYFPASYGGGSQGHHL----- 1102
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ P + + V + + D + SY + A + ++ +
Sbjct: 1103 ITGPEAEDIKGDVLNIHMREDGDIW---FNSYGDDLVISLGAHSSFTVQDYFINLQGLST 1159
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES---W 250
S + + + + + + ++ ++ + +
Sbjct: 1160 S--TQVSSSSWQGWTTQDGLSQADLDTILQNGNSASTFRVNVVTSDGTEVNFRHGALGAF 1217
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF----DGSSGLDT 306
S N + +S + ++ + S+ D D +G
Sbjct: 1218 DSTSAAAPNNAFSTLRANYHAFRNSEDVWATHRDNDDSQYSSTFADALGQARDAQTGGAV 1277
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILE 363
+ L + + + Q+ L +R + +++
Sbjct: 1278 LTAEGLATLEDMLANRDGSYNVLLGDAGQNKLVGDMDANLIRGSGGADTISGGAGNDLID 1337
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
A ++L G DV G + G + FD+ + L +D +
Sbjct: 1338 GGAGADNLDGGAGFDVLSYE------GATNGIVLYFDNPA--KGWSSLVADIVNDNVTPS 1389
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
I + EG +F + + + + G D + G
Sbjct: 1390 SESIENF--EGAVGTSFTDIFVGNDGANFFKSGDGNDVISAYGGDDTIHGGEGTDTLHGG 1447
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHG--VKEGRNPDAFKALEYIASHEDLINAFA 541
D + L SY+ +I G + F+ + +DL
Sbjct: 1448 DGFDVL-SYEGHSTAVRIKLTEQTSEFIPSPTNYVAGDHISGFEGVIGSDFDDDLNGTAG 1506
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDD 578
AG D G + + F + D
Sbjct: 1507 RNLLEGGAGND--RLSGGDGFDTFVFRAGHGMDRITD 1541
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 45/399 (11%), Positives = 93/399 (23%), Gaps = 45/399 (11%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDG---SSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ G+ ND + G+ ++ + +G+D F G D +Y I F +
Sbjct: 1036 IFGTEHNDTIRGSGEDDYLYGGAGDDHFTYSQIGGGNDILVGGEGRDVYNITYFPAS--- 1092
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
Y ++ E ++ + I + + +I + F +F
Sbjct: 1093 YGGGSQGHHLITGPEAEDIKGDVLNIHMREDGDIWFNSYGDDLVISLGAHSSFTVQDYFI 1152
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE--- 444
S + D + D + + D +
Sbjct: 1153 NLQGLSTSTQVSSSSWQGWTTQDGLSQADLDTILQNGNSASTFRVNVVTSDGTEVNFRHG 1212
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV-TFDSYLYLGSYDDLR-----NV 498
+ + + A + H + D Y ++ D
Sbjct: 1213 ALGAFDSTSAAAPNNAFSTLRANYHAFRNSEDVWATHRDNDDSQYSSTFADALGQARDAQ 1272
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAF--------------------------KALEYIAS 532
G A + R+ + A
Sbjct: 1273 TGGAVLTAEGLATLEDMLANRDGSYNVLLGDAGQNKLVGDMDANLIRGSGGADTISGGAG 1332
Query: 533 HEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQ 592
++ + AG D S G G + F+ + L +D +
Sbjct: 1333 NDLIDGGAGADNLDGGAGFDVLSYEGATNGIVLYFDNPA--KGWSSLVADIVNDNVTPSS 1390
Query: 593 HYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLS 631
I + EG F + + +S
Sbjct: 1391 ESIEN--FEGAVGTSFTDIFVGNDGANFFKSGDGNDVIS 1427
>gi|119493876|ref|ZP_01624441.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
gi|119452388|gb|EAW33579.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
Length = 358
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 83/220 (37%), Gaps = 14/220 (6%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV---TFDSYLYLGSY 492
N D F Y+ + L A G DHF FG + G +D YL +
Sbjct: 2 NFDIFDEQYYLQQYPYLQPAIEQGIIQ--SGLDHFQRFGLQLGLTGVSRYYDEAYYLENN 59
Query: 493 DDLRNVFGSD-RGAAARHYITHGVKEGRN--PDAFKALEYIASHEDLINAFADAPDLVQA 549
D+ F + H+I G +EGRN + Y+ ++ LI+ ++
Sbjct: 60 PDVAEAFNDRRFPSGLSHFIVFGYEEGRNNTTSDYDETFYLNNNSYLISQI--ETGTYKS 117
Query: 550 GKDHFSNFGYEEG-RSITFNPDLYLTSYDDLWNVFGSDRS-AAAQHYITHGMKEGRALGI 607
G HF G ++G ++ +F YL D+ + + HY +G EGR+
Sbjct: 118 GFSHFIKVGRQQGLQATSFTNPEYLQRNPDIVDAINNGVLPTGQTHYREYGQFEGRSTMF 177
Query: 608 SG-MQFKSVMNLSEKSRDKADLSLSF-DHKKVDLYTDYFG 645
+G + E + +S+ + ++ ++ G
Sbjct: 178 TGTPSSDVIATYGEGEKTIYGVSVDYPSIGSGNIDSNNDG 217
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 11/164 (6%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGRD---ITFD 400
RF Q + + Y + D+ + F + HF FG EGR+ +D
Sbjct: 36 RFGLQLGLTGVSRYYDEAYYLENNPDVAEAFNDRRFPSGLSHFIVFGYEEGRNNTTSDYD 95
Query: 401 SYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
YL + L + + + H+I G ++G +F EY+ + D+++A +
Sbjct: 96 ETFYLNNNSYLISQIETGTYKSGFSHFIKVGRQQGLQATSFTNPEYLQRNPDIVDAINNG 155
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
G+ H+ +G EGR F D+ +G
Sbjct: 156 VLPT--GQTHYREYGQFEGRSTMF----TGTPSSDVIATYGEGE 193
>gi|189347360|ref|YP_001943889.1| Hemolysin-type calcium-binding region [Chlorobium limicola DSM 245]
gi|189341507|gb|ACD90910.1| Hemolysin-type calcium-binding region [Chlorobium limicola DSM 245]
Length = 4334
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 79/585 (13%), Positives = 157/585 (26%), Gaps = 15/585 (2%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E ++ F + N T ++ D D G G +
Sbjct: 262 ENLTLQGTGDFTGTGNSLANTITGNTGNNTLTGGDGNDTLNGGTGNDLLEGDAGNDNESG 321
Query: 131 ALGLMHPGSYNGGYPVYGVDN-DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
+ G +G + G D+ + ++ DSM +
Sbjct: 322 SEGDDTLTGGDGNDTLSGGAGYDFIDGGAGNDTLNGGTEDDSMTGGAGNDLYYVDSVGDA 381
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
V++ G + Y + ++ T +G + L L G
Sbjct: 382 VVEEDGGGIDKVNATSDYALGDYVENLTLQGTGDFTGTGNTLANALTGNT---------G 432
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+++ G + T++ + + G + ND + G + N+ G D G +G D +F
Sbjct: 433 SNTLSGDAGSDTLSGGDGDDLLEGGADNDTLTGGNGNDTLDGGEGIDSMTGGTGDDVYFV 492
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ S + K +V+ A + L D ID + + +
Sbjct: 493 DSSSDIVKENSGGGNDLVFAAAAFVLANNVENLTLEGTD-DIDGTGNALGNTITGNSGNN 551
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G D + + ++ + N + +
Sbjct: 552 VLDGKGGADTLIGGDGDDTYVADASDLLVEEADGGTDTVTTSLNSYTLEEHFENLTLTGT 611
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G + L + L D G D + +
Sbjct: 612 LNSSGIGNEGENVLTGNTRNNVLQGMGGDDTLYGGAGNDTLYGGDGNDALYGDAGQDELE 671
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
G D G+D + + L ++ +++ A
Sbjct: 672 GDDGDDSLYGGADDDVLSGGDGDDSLDGN---AGNDTLSGGEGNDIVVDTAGSNVLEGGA 728
Query: 550 GKDHFSNFGYEEGRSIT-FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
G D+ + EG S+ + + YL + + G D +I + +G A
Sbjct: 729 GDDYLAAGADGEGSSLDGGDGNDYLETGSGDNSATGGDGDDTLAGFIGNVTFDGGAGNDV 788
Query: 609 GMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSD 653
+ F ++ + L F + D Y SD
Sbjct: 789 LVNFNGGSSVMQGGAGNDSLFNYFGSGVNEFSGGEDDDAYYISSD 833
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 70/492 (14%), Positives = 129/492 (26%), Gaps = 16/492 (3%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
V DL E S+ N +S D G G T+
Sbjct: 1509 DNVEDLVLVEDSVPGSGAVYGYGNELDNEITGNSLGNELGGAAGNDTLNGGNGSDTLYGG 1568
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
+ + G +YG + D D Y + G
Sbjct: 1569 DGADLLDGGAGNDELYGEGDSDTLYGGEGDDLLDGGAGDDELYGDSGSDTLYGGDGADLL 1628
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+ +++ G S GN+ + T+ G+D + GG N
Sbjct: 1629 QGDAGQDSLEGGAGEDSVSGGND----DDMLYGDEGADTLAGDAGND----EVFGGEGND 1680
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + ++ G +N T+ + +++ G GND ++G ++ GND G +
Sbjct: 1681 VLYGDDGADTLSGGTENDTLYGGSENDTLSGDEGNDSLLGGDGDDTLEGGIGNDELYGDA 1740
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D+ + +E + D L + D + +
Sbjct: 1741 GDDSL--TGGEGDDYLEDYEGNNTL--DGGDGNDTLDALLDADMQGGEGDDLLSALDNNT 1796
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ D + + + + G + + + G +
Sbjct: 1797 MDGGAGNDSLYGDYDNSMQGGEGDDSMSGEGGNTMDGGVGSDTLTGGTGNMLAGGSGNDS 1856
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
++ + G D A + D H +
Sbjct: 1857 LFGNSSNTLSGGEGDDLLDATASSELYGD--GGNDMLQVTEGENLLHGGDGDDVLAGGSG 1914
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITH--GVKEGRNPDAFKALEYIASHEDLINAF 540
D D L G D + T G F A + +DL++AF
Sbjct: 1915 NDELYGDAGDDSLAGGEGDDYLEDNDGFNTLDGGDGNDTLYGLFDADMQGGAGDDLLSAF 1974
Query: 541 ADAPDLVQAGKD 552
+ AG D
Sbjct: 1975 DNNTMDGGAGND 1986
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 48/378 (12%), Positives = 87/378 (23%), Gaps = 9/378 (2%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+G + + D DV G G + + G + +G
Sbjct: 1883 YGDGGNDMLQVTEGENLLHGGDGDDVLAGGSGNDELYGDAGDDSLAGGEGDDYLEDNDGF 1942
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ G D + + M D + +D + G
Sbjct: 1943 NTLDGGDGNDTLYGLFDADMQGGAGDDLLSAFDNNTMDGGAGNDSLYADSDNSMQGGEGD 2002
Query: 204 NNIYKIEVQQ-KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+++ + T++ G + L G S + G N T+
Sbjct: 2003 DSLSGWDGNSMDGGAGDDTLFGGGYGNTL-----SGGDGDDLAEAAGDSELYGDGGNDTL 2057
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G G D + G S N+ + + ND G +G D + +
Sbjct: 2058 RATDGANLLHGGDGEDTLEGGSGNDGLYGDADNDSLSGGAGDD--YLEDYEGSNTLEGGS 2115
Query: 323 NAIIVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
++ S L V L + L G D
Sbjct: 2116 GNDTLFGDGGDDTLTASEGSNVLDGGSGDDSLVGGSGDDTLYGGEGDDLLDGGAGDDQLY 2175
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+G D+ Y D + G D
Sbjct: 2176 GDSGSDTLYGGDGADLLEGGEGDDALYGDEGDDNLDGGYGNDTLEDWSGSNSLAGGDGDD 2235
Query: 442 ALEYIASHEDLINAFADA 459
L ++ + D
Sbjct: 2236 ILRGGSAFGSTTMSGGDG 2253
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 55/445 (12%), Positives = 99/445 (22%), Gaps = 61/445 (13%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
I S+ + Y + D D + + + G +
Sbjct: 147 IESDGAVFASSGYSHTLDLFTGTDGNDTLVGTASDDGMYGYGGNDSLRGNAGSDTMDGGS 206
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G + G D + + Y + G + + I Y
Sbjct: 207 GNDTLNGGAGDDSMTGGAGNDLYYVDSAGDEVVEGDGGGIDKVNAAIDYALGDYVENLTL 266
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G + + TI + G++ L + ++ G N
Sbjct: 267 QG----TGDFTGTGNSLANTITGNTGNNTLT-------------GGDGNDTLNGGTGNDL 309
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------------- 307
+ ++ GS G+D + G N+ +G D DG +G DT
Sbjct: 310 LEGDAGNDNESGSEGDDTLTGGDGNDTLSGGAGYDFIDGGAGNDTLNGGTEDDSMTGGAG 369
Query: 308 --FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD----------------- 348
YY S + + I VE L
Sbjct: 370 NDLYYVDSVGDAVVEEDGGGIDKVNATSDYALGDYVENLTLQGTGDFTGTGNTLANALTG 429
Query: 349 -----------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+LE A + L G D + + G D+
Sbjct: 430 NTGSNTLSGDAGSDTLSGGDGDDLLEGGADNDTLTGGNGNDTLDGGEGIDSMTGGTGDDV 489
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
F ++ AAA + A +
Sbjct: 490 YFVDSSSDIVKENSGGGNDLVFAAAAFVLANNVENLTLEGTDDIDGTGNALGNTITGNSG 549
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT 482
+ + G D ++
Sbjct: 550 NNVLDGKGGADTLIGGDGDDTYVAD 574
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/314 (12%), Positives = 83/314 (26%), Gaps = 10/314 (3%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ N +S D + G G + + + +G
Sbjct: 3940 LTGTGNDLDNVITGNSFDNELNGAGGNDTLQGGAGNDELDGGDGEDVVYGGIGNDLLDGG 3999
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ +YG ++D + + + + + + G
Sbjct: 4000 DWSDVLYGDEDDDTLRGGAYHDTLSGGAGNDSLHGGYDFDSLLGGDGDDTLYGGDGYFGM 4059
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ T+ G+D LD GG + + G N
Sbjct: 4060 AYDPATDSWAPGWIAGD--DTLDGGAGNDQLD----GGEGDDRLYGQTGNDMLEGSSGND 4113
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ +++ G G+D ++ +++ S+G+D+ DG SG DT + +
Sbjct: 4114 LLYGGAGNDNLQGGEGSDKLMSGIGDDLLDGSAGDDMLDGDSGNDTLY--GGEGTDSMKG 4171
Query: 321 FENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + D + + L + L + + G D
Sbjct: 4172 RAGNDSLDGGFGDDMLDGGAGSDYLDGSYGTDMLYGGDGDDTLVFDRYDAMIDGEDGFDT 4231
Query: 380 FESMKHFYEFGLSE 393
FG E
Sbjct: 4232 L-VFAGDDNFGFGE 4244
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 72/567 (12%), Positives = 128/567 (22%), Gaps = 75/567 (13%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
T D + D D GIG + + G
Sbjct: 1692 SGGTENDTLYGGSENDTLSGDEGNDSLLGGDGDDTLEGGIGNDELYGDAGDDSLTGGEGD 1751
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ Y G + G D + D+ L + M D + +D +
Sbjct: 1752 DYLEDYEGNNTLDGGDGNDTLDALLDADMQGGEGDDLLSALDNNTMDGGAGNDSLYGDYD 1811
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPF--------------------------IQTIYDSGGD 228
G +++ D T+ GD
Sbjct: 1812 NSMQGGEGDDSMSGEGGNTMDGGVGSDTLTGGTGNMLAGGSGNDSLFGNSSNTLSGGEGD 1871
Query: 229 DLLDLT----LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
DLLD T L G N + TE + + G + + +A + + + G +G+D + G
Sbjct: 1872 DLLDATASSELYGDGGNDMLQVTEGENLLHGGDGDDVLAGGSGNDELYGDAGDDSLAGGE 1931
Query: 285 ANNVFFESSGNDVFDGSSGLDTFF--------------YYAPSYLYKIYRFENAIIVYDA 330
++ ++ G + DG G DT + + + +Y
Sbjct: 1932 GDDYLEDNDGFNTLDGGDGNDTLYGLFDADMQGGAGDDLLSAFDNNTMDGGAGNDSLYAD 1991
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVK-------------------------QRSILEYT 365
+++ + L D S L
Sbjct: 1992 SDNSMQGGEGDDSLSGWDGNSMDGGAGDDTLFGGGYGNTLSGGDGDDLAEAAGDSELYGD 2051
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ L G ++ G D + + + D +
Sbjct: 2052 GGNDTLRATDGANLLHGGDGEDTLEGGSGNDGLYGDADNDSLSGGAGDDYLEDYEGSNTL 2111
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF-D 484
G L L D + G D ++ D
Sbjct: 2112 EGGSGNDTLFGDGGDDTLTASEGSNVLDGGSGDDSLVGGSGDDTLYGGEGDDLLDGGAGD 2171
Query: 485 SYLYLGSYDDLRNVFGSD-----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
LY S D Y G LE + L
Sbjct: 2172 DQLYGDSGSDTLYGGDGADLLEGGEGDDALYGDEGDDNLDGGYGNDTLEDWSGSNSLAGG 2231
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSIT 566
D + + G + ++
Sbjct: 2232 DGDDILRGGSAFGSTTMSGGDGNDQLS 2258
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 69/488 (14%), Positives = 133/488 (27%), Gaps = 47/488 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S+ + + S D G G ++ + ++ + G
Sbjct: 3746 TASEGSNVLDGGSGDDSLVGGSGDDSLYGDSGYDSLSGGAGNDYLMDWDGINTMDGGEGD 3805
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFL-TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
H S+ G + G + D + + + M D++ D S D +
Sbjct: 3806 DHVVSFGGNSSLTGGEGDDTLEGWEGNNTMEGGAGNDTLEDMSGFNTMDGGEGDDLLNGG 3865
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNT 247
I+ G GN+ T+ GDDL ++ + Y ++
Sbjct: 3866 IFNVMDGGAGNDTLS-------GYMYNTMRGGEGDDLYVLESTDNVVEESAGEGYDTVHA 3918
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ +++ + + G+ ++V+ GNS +N + GND G +G D
Sbjct: 3919 AVNCVLTDNVEDLVLLDVPEALTGTGNDLDNVITGNSFDNELNGAGGNDTLQGGAGND-- 3976
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+Y ++ D + L A
Sbjct: 3977 ELDGGDGEDVVYGGIGNDLLDGG-----------------DWSDVLYGDEDDDTLRGGAY 4019
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
++ L G D F +G D + Y G D + A +
Sbjct: 4020 HDTLSGGAGNDSLHGGYDFDSLLGGDGDDTLYGGDGYFGMAYDPATDSWAPGWIAGDDTL 4079
Query: 428 THGVKEGR--NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
G + + L ++ L + + G D+ +
Sbjct: 4080 DGGAGNDQLDGGEGDDRLYGQTGNDMLEGSSGNDLLYGGAGNDNLQGGEGSDKLMSGIGD 4139
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
L GS D G + +++ A ++ L F D
Sbjct: 4140 DLLDGSAGDDMLDG------------DSGNDTLYGGEGTDSMKGRAGNDSLDGGFGDDML 4187
Query: 546 LVQAGKDH 553
AG D+
Sbjct: 4188 DGGAGSDY 4195
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 62/495 (12%), Positives = 126/495 (25%), Gaps = 44/495 (8%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + + +++D + G G ++S + G
Sbjct: 3765 GGSGDDSLYGDSGYDSLSGGAGNDYLMDWDGINTMDGGEGDDHVVSFGGNSSLTGGEGDD 3824
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G + G + + D +++ + +Y
Sbjct: 3825 TLEGWEGNNTMEGGAGNDTLEDMSGFNTMDGGEGDDLLNGGIFNVMDGGAGNDTLSGYMY 3884
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+G G+++Y +E ++ L V++ + L+ + G
Sbjct: 3885 NTMRGGEGDDLYVLESTDNVVEESAGEGYDTVHAAVNCVLTDNVEDLVLLDVPEALTGTG 3944
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + I ++ + G+ GND + G + N+ G DV G G D
Sbjct: 3945 NDLDNVITGNSFDNELNGAGGNDTLQGGAGNDELDGGDGEDVVYGGIGND---------- 3994
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
L D + L A ++ L
Sbjct: 3995 ---------------------------LLDGGDWSDVLYGDEDDDTLRGGAYHDTLSGGA 4027
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D F +G D + Y G D + A + G +
Sbjct: 4028 GNDSLHGGYDFDSLLGGDGDDTLYGGDGYFGMAYDPATDSWAPGWIAGDDTLDGGAGNDQ 4087
Query: 436 --NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+ L ++ L + + G D+ + L GS
Sbjct: 4088 LDGGEGDDRLYGQTGNDMLEGSSGNDLLYGGAGNDNLQGGEGSDKLMSGIGDDLLDGSAG 4147
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
D S Y G + +L+ + L G D
Sbjct: 4148 DDMLDGDSGNDTL---YGGEGTDSMKGRAGNDSLDGGFGDDMLDGGAGSDYLDGSYGTD- 4203
Query: 554 FSNFGYEEGRSITFN 568
+G + ++ F+
Sbjct: 4204 -MLYGGDGDDTLVFD 4217
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 65/512 (12%), Positives = 133/512 (25%), Gaps = 36/512 (7%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E ++ F + N ++ +D G G +
Sbjct: 406 ENLTLQGTGDFTGTGNTLANALTGNTGSNTLSGDAGSDTLSGGDGDDLLEGGADND---- 461
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L + G D S + +++ + A
Sbjct: 462 TLTGGNGNDTLDGGEGIDSMTGGTGDDVYFVDSSSDIVKENSGGGNDLVFAAAAFVLANN 521
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYID 244
V+ + + + + + GG D L D + ++
Sbjct: 522 VENLTLEGTDDIDGTGNALGNTITGNSGNNVLDGKGGADTLIGGDGDDTYVADASDLLVE 581
Query: 245 LNTESWSSIGGYEKNMTIA--------QHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
++ + T+ T+ S +G+ G +V+ GN+ NNV G+D
Sbjct: 582 EADGGTDTVTTSLNSYTLEEHFENLTLTGTLNSSGIGNEGENVLTGNTRNNVLQGMGGDD 641
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G +G DT + +Y + + + + + DS++
Sbjct: 642 TLYGGAGNDTLY--GGDGNDALYGDAGQDELEGDDGDDSLYGGADDDVLSGGDGDDSLDG 699
Query: 357 K-QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL---SEGRDIT-FDSYLYLGSYDDL 411
L + ++ G +V E EG + D YL +
Sbjct: 700 NAGNDTLSGGEGNDIVVDTAGSNVLEGGAGDDYLAAGADGEGSSLDGGDGNDYLETGSGD 759
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDA--------FKALEYIASHEDLINAFADAPDLV 463
+ G D +I + +G + ++ A ++ L N F +
Sbjct: 760 NSATGGDGDDTLAGFIGNVTFDGGAGNDVLVNFNGGSSVMQGGAGNDSLFNYFGSGVNEF 819
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
G+D + + + V + + + T G
Sbjct: 820 SGGEDDDAYYISSDTDMVIEQIDEGVDTVYQGIGSYVLTDNVENLVLSTFGSVVAVTGTG 879
Query: 524 FKALEYIASH---EDLINAFADAPDLVQAGKD 552
I + L + L AG D
Sbjct: 880 NDLDNVITGNEADNTLDGGLGNDTILGGAGND 911
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 53/438 (12%), Positives = 112/438 (25%), Gaps = 11/438 (2%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+D +S G Y+ D G T+ + + + G
Sbjct: 2086 GDADNDSLSGGAGDDYLEDYEGSN-TLEGGSGNDTLFGDGGDDTLTASEGSNVLDGGSGD 2144
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G +YG + D D Y S D +G ++ +
Sbjct: 2145 DSLVGGSGDDTLYGGEGDDLLDGGAGDDQLYGD---SGSDTLYGGDGADLLEGGEGDDAL 2201
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG + Y +D ++ GDD+L + + +
Sbjct: 2202 YGDEGDDNLDGGYG-NDTLEDWSGSNSLAGGDGDDIL--RGGSAFGSTTMSGGDGNDQLS 2258
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ ++ + + G + + G + N+ G+ G G D+F S
Sbjct: 2259 VWGGCNSLDGGEGDDLLYGQESDTTMFGGAGNDSMGGEGGSRTMFGGDGDDSFTVTGGSD 2318
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + E V+ + + + L + + + + L
Sbjct: 2319 VVTEFAGEGDDTVFASVNYTLTDNVEDLVLEETPGALSGTGNAMDNRITGNSFDNLLDGA 2378
Query: 375 IGQDVFESMKHFYEFGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G D G D+ + D + LG+ ++ + D
Sbjct: 2379 DGDDSLYGGAGNDTIAGGAGNDVVDAGSGDDVIVLGAGEETVDAGEGDDTVTVTGRELDE 2438
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+ + S + A + + EG ++ + G
Sbjct: 2439 ADRIQGGAGSDTVLLDNSAGGVQAAVDLSNVSGVERYVISDSGDLGEGADRDVNTLSFTG 2498
Query: 491 SYDDLRNVFGSDRGAAAR 508
+ D A
Sbjct: 2499 GSAEAAETITIDGTALTD 2516
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/302 (15%), Positives = 89/302 (29%), Gaps = 10/302 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ ++ + + D + GG + L ++ G N I +
Sbjct: 2865 DTSEELPEGSVRVDGASVSDPFSFLVTGGTGDDTLLTGAGSDTVDGGAGNDVIDGGAGND 2924
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+ G G+D + G S +++ SGND DGS+G D+ Y +N
Sbjct: 2925 SLSGEEGDDSLGGGSGDDMLEGGSGNDSLDGSAGDDSL----AGGEGDDYLEDNDGFNTL 2980
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D L + D + + + D + + + +
Sbjct: 2981 DGGDGNDTLYGLFDADMQGGAGDDLLSAFDNNTMDGGAGNDSLYADSDNSMQGGEGDDSL 3040
Query: 390 GLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITH--GVKEGRNPDAFKAL 443
EG + D+ G + L G D AA + G + L
Sbjct: 3041 SGWEGNTMDGGAGDDTLSGGGYGNTLSGGDGDDLAEAAGDSELYGDGGNDTLRATEGANL 3100
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
Y + ED + + L + + G + ++ L ++G
Sbjct: 3101 LYGGAGEDTLEGGSGNDGLYGDADNDSLSGGAGDDYLEDYEGSNTLEGGSGNDTLYGDSE 3160
Query: 504 GA 505
+
Sbjct: 3161 DS 3162
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/314 (14%), Positives = 82/314 (26%), Gaps = 17/314 (5%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL------ 304
+++ G E N T+ + + G G+D + G++ +N +GND G +G
Sbjct: 1417 NTLRGGEGNDTL-FGSASNLLDGGDGDDTLEGSN-DNTMEGGAGNDSLYGDAGNVMAGGQ 1474
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF------ADQCIDSVNVKQ 358
D Y + + +VE L + +
Sbjct: 1475 DDDTYMLAGAGNTVTELDGEGSDTVYASVDYTLTDNVEDLVLVEDSVPGSGAVYGYGNEL 1534
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ + + +L G D +G D+ Y + +
Sbjct: 1535 DNEITGNSLGNELGGAAGNDTLNGGNGSDTLYGGDGADLLDGGAGNDELYGEGDSDTLYG 1594
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
G E L Y DL+ A L + + G ++
Sbjct: 1595 GEGDDLLDGGAGDDELYGDSGSDTL-YGGDGADLLQGDAGQDSLEGGAGEDSVSGGNDDD 1653
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
+ L VFG + Y G L + ++ L
Sbjct: 1654 MLYGDEGADTLAGDAGNDEVFGGEGNDVL--YGDDGADTLSGGTENDTLYGGSENDTLSG 1711
Query: 539 AFADAPDLVQAGKD 552
+ L G D
Sbjct: 1712 DEGNDSLLGGDGDD 1725
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 70/540 (12%), Positives = 138/540 (25%), Gaps = 57/540 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + +++D + G G ++S + A G
Sbjct: 3277 GGSGDDSLYGESGYDSLSGGAGNDYLMDWDGINTMDGGEGNDQVVSFGGNSSVTGAEGDD 3336
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G + G + + D ++ + +Y
Sbjct: 3337 TLVGWEGNNTMEGGAGNDTLEDMSGFNTMEGGEGDDSLNGMSFNVMDGGAGNDTLSGYMY 3396
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+G G+++Y +E ++ L V++ + L+ + G
Sbjct: 3397 NTMRGGEGDDLYVLESTDNVVEESAGEGYDTVHAAVNCVLTDNVEDLVLLDVPEALTGTG 3456
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + I ++ + G+ GND + G + N+ G D G G D+ Y S
Sbjct: 3457 NDLDNVITGNSFDNELNGAGGNDTLQGGAGNDELDGGDGEDFLAGGEGDDS--YEVDSAG 3514
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRF-----------ADQCIDSVNVKQRSILEY 364
+ +VE L D ++L+
Sbjct: 3515 DLVVEQAGEGHDTVFASLNYTLTDNVEDLVLVDVPEAVSGTGNDLDNVITGNGYDNVLDG 3574
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD------------------------ 400
+ + G D S E EG D D
Sbjct: 3575 AEGSDTIDGGAGNDTVMSGAGDDELYGGEGDDYLEDRDGSNSIDGGNGNDTLTGSSGNTM 3634
Query: 401 ------SYLYLGSYDDLRNVFGSDRGAA-ARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
LY S + + G D A + + + G F +D++
Sbjct: 3635 EGGEGNDCLYGVSSNSMAGGDGDDSIAGESGNSMDGGAGNDTLTGDFNNTLQGGEADDVL 3694
Query: 454 NAFADAPDLVQVGKDHFSN--------FGCEEGRFVTFDSYLYLGSYDDLRNVFG----- 500
+A D G D + ++ D+ +Y +D
Sbjct: 3695 SALDDNSMDGGSGNDTLTGDMFNTMHGGEGDDVIDGFGDNSMYGDGGNDTLTASEGSNVL 3754
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
G + +L A ++ L++ G DH +FG
Sbjct: 3755 DGGSGDDSLVGGSGDDSLYGDSGYDSLSGGAGNDYLMDWDGINTMDGGEGDDHVVSFGGN 3814
Score = 54.4 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 43/322 (13%), Positives = 90/322 (27%), Gaps = 14/322 (4%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
++ G + + + + G E + TI ++V+ +G+D + G ++ +
Sbjct: 3552 VSGTGNDLDNVITGNGYDNVLDGAEGSDTIDGGAGNDTVMSGAGDDELYGGEGDDYLEDR 3611
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
G++ DG +G DT S + E +Y + + + +
Sbjct: 3612 DGSNSIDGGNGNDTL---TGSSGNTMEGGEGNDCLYGVSSNSMAGGDGDDSIAGESGNSM 3668
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD--SYLYLGSYDD 410
++ L DV ++ G S +T D + ++ G DD
Sbjct: 3669 DGGAGNDTLT--GDFNNTLQGGEADDVLSALDDNSMDGGSGNDTLTGDMFNTMHGGEGDD 3726
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRN----PDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ + FG + T EG N +L + + L G
Sbjct: 3727 VIDGFGDNSMYGDGGNDTLTASEGSNVLDGGSGDDSLVGGSGDDSLYGDSGYDSLSGGAG 3786
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
D+ ++ + + G G
Sbjct: 3787 NDYLMDWDGINTMDGGEGDDHVVSFGGNSSLTGGEGDDTLE---GWEGNNTMEGGAGNDT 3843
Query: 527 LEYIASHEDLINAFADAPDLVQ 548
LE ++ + D
Sbjct: 3844 LEDMSGFNTMDGGEGDDLLNGG 3865
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 54/448 (12%), Positives = 110/448 (24%), Gaps = 37/448 (8%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E ++ + N T +S + AD G G T +
Sbjct: 523 ENLTLEGTDDIDGTGNALGNTITGNSGNNVLDGKGGADTLIGGDGDDTYV---------- 572
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+ + D D+ TS+ SY + + G + + +
Sbjct: 573 ----------ADASDLLVEEADGGTDTVTTSLNSYTLEEHFENLTLTGTLNSSGIGNEGE 622
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID-----L 245
+ + T+Y G+D L D
Sbjct: 623 NVLT--GNTRNNVLQGMGGDDTLYGGAGNDTLYGGDGNDALYGDAGQDELEGDDGDDSLY 680
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G + + ++ + +++ G GND+V+ + +NV +G+D + +
Sbjct: 681 GGADDDVLSGGDGDDSLDGNAGNDTLSGGEGNDIVVDTAGSNVLEGGAGDDYLAAGADGE 740
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR---SIL 362
+ + + + + F + V V S++
Sbjct: 741 GSSLDGGDGNDYL-ETGSGDNSATGGDGDDTLAGFIGNVTFDGGAGNDVLVNFNGGSSVM 799
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG------ 416
+ A + L G V E + D D + G
Sbjct: 800 QGGAGNDSLFNYFGSGVNEFSGGEDDDAYYISSDTDMVIEQIDEGVDTVYQGIGSYVLTD 859
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ + + G D + + L + L G D +
Sbjct: 860 NVENLVLSTFGSVVAVTGTGNDLDNVITGNEADNTLDGGLGNDTILGGAGNDFIEDMLGS 919
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ NV G G
Sbjct: 920 NSLDGGEGDDTIRTGSLNDSNVVGGGVG 947
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 53/361 (14%), Positives = 85/361 (23%), Gaps = 38/361 (10%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D+ + G L S S + ++ G+ GND ++G +++
Sbjct: 122 GADVAASSNKTGRGGDWLLEVASGSIESDGAVFASSGYSHTLDLFTGTDGNDTLVGTASD 181
Query: 287 NVFFESSGNDVFDGSSGLDTF-------------------------FYYAPSYLYKIYRF 321
+ + GND G++G DT YY S ++
Sbjct: 182 DGMYGYGGNDSLRGNAGSDTMDGGSGNDTLNGGAGDDSMTGGAGNDLYYVDSAGDEVVEG 241
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQ----------CIDSVNVKQRSILEYTASYEDL 371
+ I VE L + L + L
Sbjct: 242 DGGGIDKVNAAIDYALGDYVENLTLQGTGDFTGTGNSLANTITGNTGNNTLTGGDGNDTL 301
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D+ E SEG D F D GA
Sbjct: 302 NGGTGNDLLEGDAGNDNESGSEGDDTLTGGDGNDTLSGGAGYDF-IDGGAGNDTLNGGTE 360
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+ A L Y+ S D + ++ E +
Sbjct: 361 DDSMTGGAGNDLYYVDSVGDAVVEEDGGGIDKVNATSDYALGDYVENLTLQGTGDFTGTG 420
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
+ G+ G D LE A ++ L + G
Sbjct: 421 NTLANALTGNTGSNTLS--GDAGSDTLSGGDGDDLLEGGADNDTLTGGNGNDTLDGGEGI 478
Query: 552 D 552
D
Sbjct: 479 D 479
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 60/495 (12%), Positives = 124/495 (25%), Gaps = 34/495 (6%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
T S D G G + + + + G +
Sbjct: 3102 YGGAGEDTLEGGSGNDGLYGDADNDSLSGGAGDDYLEDYEGSNTLEGGSG-NDTLYGDSE 3160
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ G + D D +++ +M D++ F D ++ G+
Sbjct: 3161 DSMSGGEGDDLLDGWMSELMDGGAGNDTLTGDMFNTMQGGEGDDALSALDGNSMDGGAGN 3220
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + D GD+ ++ G + +E + + G + ++
Sbjct: 3221 DTLSGDMLNTMHGGDGDDAIDGFGDN----SMYGDGGDDTLTASEGSNVLDGGSGDDSLV 3276
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ +S+ G SG D + G + N+ + G + DG G D + + ++
Sbjct: 3277 GGSGDDSLYGESGYDSLSGGAGNDYLMDWDGINTMDGGEGNDQVVSFGGNSSVTGAEGDD 3336
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
++ ++ N + + + S+ S+ + G D
Sbjct: 3337 TLVGWEGNNTMEGGAGNDTLEDMSGFNTMEGGEGDDSL--NGMSFNVMDGGAGNDTLSGY 3394
Query: 384 KHFYEFGLSEGRDITFDSYLY-------LGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+ EG D+ YD + + V E
Sbjct: 3395 M-YNTMRGGEGDDLYVLESTDNVVEESAGEGYDTVHAAVNCVLTDNVEDLVLLDVPEALT 3453
Query: 437 PDAFKALEYIASHE---DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY----- 488
I + +L A + G D E+ Y
Sbjct: 3454 GTGNDLDNVITGNSFDNELNGAGGNDTLQGGAGNDELDGGDGEDFLAGGEGDDSYEVDSA 3513
Query: 489 --------LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH---EDLI 537
+D + + V E + I + L
Sbjct: 3514 GDLVVEQAGEGHDTVFASLNYTLTDNVEDLVLVDVPEAVSGTGNDLDNVITGNGYDNVLD 3573
Query: 538 NAFADAPDLVQAGKD 552
A AG D
Sbjct: 3574 GAEGSDTIDGGAGND 3588
Score = 45.2 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 43/293 (14%), Positives = 77/293 (26%), Gaps = 15/293 (5%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+G + D + G + + ++ G N + T +S+ G G+DV+ N
Sbjct: 1070 AGTGNEQDNVITGNDADNLLDGAGGNDTLYGLTGNDYLYGGTGDDSIDGGDGDDVLEDND 1129
Query: 285 ANNVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFE---NAIIVYDANE 332
N GND DG SG D + + + + ++
Sbjct: 1130 GANTMLGGEGNDNLFGFSGSNTMDGGSGDDYLYGETNNDMQGGEGDDTLEGSLGNTMDGG 1189
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D L E D + + +D+++ + + + S
Sbjct: 1190 DGGDSLYGSESNTLIGGEGDDTLYGETNNDMQGGDGQDILEGYQYNTMDGGEGNDNLYGS 1249
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
E + S D + G + A + G E LE L
Sbjct: 1250 EANTLAGGEGDDTLSGDSFNMLQGGEGDDALYGF---GDNEMYGDSGNDTLESGDGGNLL 1306
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
D + G D + S + GS
Sbjct: 1307 DGGEGDDSLVGGSGSDTLYGQAGSDLLDGGDGDDYLDDSNGSDTFMGGSGNDT 1359
>gi|316935444|ref|YP_004110426.1| outer membrane adhesin like proteiin [Rhodopseudomonas palustris
DX-1]
gi|315603158|gb|ADU45693.1| outer membrane adhesin like proteiin [Rhodopseudomonas palustris
DX-1]
Length = 1551
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 69/240 (28%), Gaps = 25/240 (10%)
Query: 212 QQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
D+ F T+ D GG ++T+I + + T + G ++ IA +
Sbjct: 1265 FSGDATFSYTVSDGRGGTATANVTVIVAPQPEPPVGTPGDDVLNGTSRDDVIAAGEGDDE 1324
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY---------------- 314
V G +GND + G + ++ G+D+ G G D A S
Sbjct: 1325 VFGVAGNDTIDGGAGDDRIDGGHGDDILVGGDGDDELIGGAGSDILVGGAGDDELDGGDG 1384
Query: 315 ---LYKIYRFENAIIVYDAN-----EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + E D L ++E + + + L A
Sbjct: 1385 HDVADYTADSAGFVADLSSGRASGDEIGYDSLRNIEIVLGGSGNDTLIGDSNANTLVGNA 1444
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ LI G DV G D S + G H+
Sbjct: 1445 GDDALIGGGGDDVLRGGTGDDTIDGGAGFDTLDLSDATGAVTISFTAGTATGAGIGTDHF 1504
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 3/95 (3%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N T+ + ++VG++G+D +IG ++V +G+D DG +G DT +
Sbjct: 1424 GGSGNDTLIGDSNANTLVGNAGDDALIGGGGDDVLRGGTGDDTIDGGAGFDTLDLSDATG 1483
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
I D + +E
Sbjct: 1484 AVTISFTAGTAT---GAGIGTDHFTGIESFVLGRG 1515
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 33/92 (35%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ N I + + G+ G+D +IG S ++ G DV G G D
Sbjct: 265 GDDVVRAGAGNDVIYGDAGNDLLFGAGGSDQLIGGSGDDFLDGGEGTDVLTGGVGNDVIV 324
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
++ + + + A+ + D ++
Sbjct: 325 ATGDEVIFHTGDGIDLVSLDSASTIRLDGVTS 356
>gi|194214001|ref|XP_001490302.2| PREDICTED: matrix metallopeptidase 11 (stromelysin 3) [Equus
caballus]
Length = 472
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 63/195 (32%), Gaps = 52/195 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIH 76
L W + Y+ + + ++ AL WS+V LTF E H
Sbjct: 84 LSGGRWEKTELTYRILRFPWQLVREQV-------RQTVAEALQVWSEVTPLTFTEVHEGH 136
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G +GT L
Sbjct: 137 ADITIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGDNQGTDLL 194
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H + ++MS +F Y
Sbjct: 195 QVAAHEFGHVLGLQHT-------------------TAAKALMS--------PFYTFRYPL 227
Query: 182 TPMVSDIVAVQKIYG 196
+ D +Q +YG
Sbjct: 228 SLSPDDRRGIQHLYG 242
>gi|166363088|ref|YP_001655361.1| putative calcium binding hemolysin protein [Microcystis aeruginosa
NIES-843]
gi|166085461|dbj|BAG00169.1| putative calcium binding hemolysin protein [Microcystis aeruginosa
NIES-843]
Length = 836
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/255 (16%), Positives = 79/255 (30%), Gaps = 11/255 (4%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
+ D G I + G +G +YG + +
Sbjct: 168 GTNGNDNITGTSGDDNIYGLGGNDTLSGLAGNDRLEGGSGNNTLYGGTGNDVFNFAYPLN 227
Query: 163 MSYFMPQDSMMDASFGYCATPM-VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT 221
+ + + + +SD +Q + + + +Q+
Sbjct: 228 TNTSDVAMDFVQGQDKIDVSSLNLSDWATLQLLISNDGKNNALITTFFD-------GVQS 280
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
G + L + N I+LN S Y N + +++ G GND +
Sbjct: 281 QLKLNGINPTLLQASDFIFNTINLNQ-SIDGDDFYTYNDQLFGGLGNDTLRGFKGNDTLF 339
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLS 339
G ++ SG+D G G DT Y Y + + D AN D L
Sbjct: 340 GEQGDDRLDGGSGSDTLYGGLGDDTAVYTGNRSQYSWTSNQGVFTITDSVANRDGIDTLY 399
Query: 340 DVERLRFADQCIDSV 354
+++L+F+DQ +
Sbjct: 400 GIQKLQFSDQIVTIA 414
Score = 45.5 bits (106), Expect = 0.027, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 52/172 (30%), Gaps = 5/172 (2%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR---- 320
+ + G++GN+ + GNS N +G D G G DTF +
Sbjct: 662 GSNNINGTGNAGNNKITGNSGINQINGRAGIDTLTGGLGADTFIFQFGQSTISTRDRITD 721
Query: 321 -FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
N+ + + + R A+ + ++ + Q +G +
Sbjct: 722 FAINSDKIDLLTQGGTATSAPSNFSRAANSTVTTLQNLINQVFTDANGATTGNQGLGVNS 781
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
++ I + + S D L N+ G A I G
Sbjct: 782 AALVQVTTGAIAGTYLVINDSAAGFQSSNDLLINITGFTGALPALGNIPVGN 833
Score = 43.6 bits (101), Expect = 0.098, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 49/218 (22%), Gaps = 15/218 (6%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+ + + + L + G D E G D+ +Y
Sbjct: 165 DFTGTNGNDNITGTSGDDNIYGLGGNDTLSGLAGNDRLEGGSGNNTLYGGTGNDVFNFAY 224
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
+ D+ F + + N + L+ + S++ NA
Sbjct: 225 PLNTNTSDVAMDFVQGQDKIDVSSL--------NLSDWATLQLLISNDGKNNALITTFFD 276
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA--RHYITHGVKEGRN 520
+ + + ++ + +L D + + G R
Sbjct: 277 GVQSQLKLNGI-----NPTLLQASDFIFNTINLNQSIDGDDFYTYNDQLFGGLGNDTLRG 331
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
L + L G D G
Sbjct: 332 FKGNDTLFGEQGDDRLDGGSGSDTLYGGLGDDTAVYTG 369
>gi|163735885|ref|ZP_02143313.1| iron-regulated protein FrpC, putative [Roseobacter litoralis Och
149]
gi|161390821|gb|EDQ15162.1| iron-regulated protein FrpC, putative [Roseobacter litoralis Och
149]
Length = 978
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 64/241 (26%), Gaps = 13/241 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ ++ G+D + GG N + + ++ G N I +
Sbjct: 681 GNDTLEGGNGNDRLFGGKGNDEI----SGGEGNDVIVGKAGNDNLVGDGGNDIILGNFGN 736
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +G+D + + N+ S GND G G D F + + + E A +
Sbjct: 737 DFLTGGAGDDALYAGAGNDNLDGSEGNDQLYGGDGDD--FVFGGTGDDLLVGSEGADTLV 794
Query: 329 DANEHKQDFLSDVERLRFADQCIDSV---NVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D L F D ++ + L G DV
Sbjct: 795 --GSDGNDTLRGGNGDDFVTGLNDDDVLFGGDGDDLILGGDGNDRLWGGTGDDVLTGGAR 852
Query: 386 FYEFGLSEGRDITF--DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D D+ D+ F A G+
Sbjct: 853 RDILHGGAGNDTFVFDDTSDSQQLSVDVIKDFEGAGSAVGDVIDLSGIDADITVAGNGDQ 912
Query: 444 E 444
Sbjct: 913 S 913
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/420 (13%), Positives = 105/420 (25%), Gaps = 52/420 (12%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+I G + + I + + +GND ++ N+ F +G D +G SG DT
Sbjct: 506 GSDTITGTDGDNLIVSGAGSDVIYAGAGNDTILAEWGNDTVFAGAGADHVNGGSGNDTII 565
Query: 309 -----YYAPSYLYKIYRFENAIIVYDANEHKQDFL------------------------- 338
+ A + + Y D +
Sbjct: 566 TSGNDFAAGESGDDTVIISSGLPSYIRGGEGVDTIDASASDFDFTIDLYDGYLESNLFIF 625
Query: 339 ---------SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
S + L D + + L G D+
Sbjct: 626 DGFENLFTGSGDDVLSGTDVDNRIGGGAGDDQIFGRGGDDSLFGEDGDDILFGEDGNDTL 685
Query: 390 GLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFK 441
G D F + + G +D+ + + + + A
Sbjct: 686 EGGNGNDRLFGGKGNDEISGGEGNDVIVGKAGNDNLVGDGGNDIILGNFGNDFLTGGAGD 745
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
Y + D ++ L D F G + V + L D + G
Sbjct: 746 DALYAGAGNDNLDGSEGNDQLYGGDGDDFVFGGTGDDLLVGSEGADTLVGSDGNDTLRGG 805
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
+ V G + D + ++ L D A +D G
Sbjct: 806 NGDDFVTGLNDDDVLFGGDGD--DLILGGDGNDRLWGGTGDDVLTGGARRD--ILHGGAG 861
Query: 562 GRSITFNPDLYLTS-YDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSE 620
+ F+ D+ F SA G+ + +G Q + + ++
Sbjct: 862 NDTFVFDDTSDSQQLSVDVIKDFEGAGSAVGDVIDLSGIDADITVAGNGDQSFTFLGVAT 921
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 53/426 (12%), Positives = 103/426 (24%), Gaps = 69/426 (16%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGD--DLLDLTLIGGVKNYIDLNT---------ESWS 251
G + + + + +GG + I L S S
Sbjct: 305 GGFVVAWNDDTTGNVIARNFWANGGTEGSAFTIEDTNTSHLDISLTADGRLLFAWLGSDS 364
Query: 252 SIGG----------------------YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + ++ ++ T ++ D V+G SA +V
Sbjct: 365 EVFASIWDPRPNVIETSAPDVIRANFLQTDLFTSRPTDDTNIRAGEKGDTVLGQSARDVI 424
Query: 290 --------FESSGNDV--------------FDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
F GND DG SG D + + Y +
Sbjct: 425 ISSGSGSFFGGGGNDTLYASANTFVGDFELLDGGSGRDRLYTTSFRGDYTVNLITGETDY 484
Query: 328 YDANEHKQDFLSDVER---------LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A + + E + D V+ ++ A + ++ G D
Sbjct: 485 AGAPAVPVESFINFEDIFTGVGSDTITGTDGDNLIVSGAGSDVIYAGAGNDTILAEWGND 544
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLG---SYDDLRNVFGSDRGAAARHYITHGVKEGR 435
+ G D S S DD + +
Sbjct: 545 TVFAGAGADHVNGGSGNDTIITSGNDFAAGESGDDTVIISSGLPSYIRGGEGVDTIDASA 604
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
+ F Y E + F +L D + + R +
Sbjct: 605 SDFDFTIDLYDGYLESNLFIFDGFENLFTGSGDDVLSGTDVDNRIGGGAGDDQIFGRGGD 664
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
++FG D + G + L ++++ + + +AG D+
Sbjct: 665 DSLFGEDGDDIL--FGEDGNDTLEGGNGNDRLFGGKGNDEISGGEGNDVIVGKAGNDNLV 722
Query: 556 NFGYEE 561
G +
Sbjct: 723 GDGGND 728
>gi|209525312|ref|ZP_03273854.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209494327|gb|EDZ94640.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 539
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 69/195 (35%), Gaps = 12/195 (6%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D GG N + L TE + G N T+ T ++++G GND++ G N+
Sbjct: 217 DHVFEGGDGNSLILGTEGNDLLYGGGGNNTLYGFTGNDTLIGGGGNDLLYGGQNNDFLDG 276
Query: 292 SSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+GN+ G DT + + + + +Y ++ + L
Sbjct: 277 GNGNNTLYGGLNDDTLLGGIGRDLLFGEAGNDFLDGGDGNDTLYGGEDNDTLLGGNGNDL 336
Query: 345 RFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF---- 399
F +Q DS++ L + L+ G D+ + +G D +
Sbjct: 337 LFGNQGNDSLDGGPGDDTLYGGKGDDTLLGSQGDDILLGNQGNDILYGGDGDDCLYGGQG 396
Query: 400 DSYLYLGSYDDLRNV 414
D LY G D +
Sbjct: 397 DDTLYGGRGRDYLSG 411
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 68/234 (29%), Gaps = 7/234 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + I + G+DLL GG N ++ G N + +
Sbjct: 217 DHVFEGGDGNSLILGTEGNDLL----YGGGGNNTLYGFTGNDTLIGGGGNDLLYGGQNND 272
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +GN+ + G ++ G D+ G +G D F +Y E+ +
Sbjct: 273 FLDGGNGNNTLYGGLNDDTLLGGIGRDLLFGEAGND--FLDGGDGNDTLYGGEDNDTLLG 330
Query: 330 ANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
N + F + + L K L + + L+ G D+
Sbjct: 331 GNGNDLLFGNQGNDSLDGGPGDDTLYGGKGDDTLLGSQGDDILLGNQGNDILYGGDGDDC 390
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+G D + D N F +A + + F
Sbjct: 391 LYGGQGDDTLYGGRGRDYLSGDRGNDFLVGVDTSADFPGLTTIDTLVGGEGFDT 444
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 59/161 (36%), Gaps = 5/161 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T+Y +D L +GG N + + S+ G + T+
Sbjct: 306 GNDFLDGGDGNDTLYGGEDNDTL----LGGNGNDLLFGNQGNDSLDGGPGDDTLYGGKGD 361
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++GS G+D+++GN N++ + G+D G G DT Y Y N +V
Sbjct: 362 DTLLGSQGDDILLGNQGNDILYGGDGDDCLYGGQGDDTL-YGGRGRDYLSGDRGNDFLVG 420
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
L+ ++ L + V ++ + +
Sbjct: 421 VDTSADFPGLTTIDTLVGGEGFDTFVLGNEKGPFYDNGNDD 461
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/201 (13%), Positives = 45/201 (22%), Gaps = 19/201 (9%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GN +++G N++ + GN+ G +G DT +Y +N
Sbjct: 222 GGDGNSLILGTEGNDLLYGGGGNNTLYGFTGNDTLI--GGGGNDLLYGGQNND------- 272
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
L + L + L G D +
Sbjct: 273 ----------FLDGGNGNNTLYGGLNDDTLLGGIGRDLLFGEAGNDFLDGGDGNDTLYGG 322
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
E D + + N Y G L ++ L
Sbjct: 323 EDNDTLLGGNGNDLLFGNQGNDSLDGGPGDDTLYGGKGDDTLLGSQGDDILLGNQGNDIL 382
Query: 453 INAFADAPDLVQVGKDHFSNF 473
D G D
Sbjct: 383 YGGDGDDCLYGGQGDDTLYGG 403
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 18/153 (11%), Positives = 31/153 (20%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
D + + +L L G D + D
Sbjct: 218 HVFEGGDGNSLILGTEGNDLLYGGGGNNTLYGFTGNDTLIGGGGNDLLYGGQNNDFLDGG 277
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
Y L + + G D L ++ L+ +
Sbjct: 278 NGNNTLYGGLNDDTLLGGIGRDLLFGEAGNDFLDGGDGNDTLYGGEDNDTLLGGNGNDLL 337
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
G D ++ + LGS D
Sbjct: 338 FGNQGNDSLDGGPGDDTLYGGKGDDTLLGSQGD 370
>gi|329848645|ref|ZP_08263673.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843708|gb|EGF93277.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1199
Score = 77.9 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 53/489 (10%), Positives = 107/489 (21%), Gaps = 28/489 (5%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E+ I T DV G ++ + +
Sbjct: 404 ESVIGGSGDDTVYGAAGNDTVEGLGGSDQLFGESGDDVLNGGDETDGLIGGSGADRLAGG 463
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G + ++ E S + ++ +
Sbjct: 464 NGGDYLTDEVSSISANLDNDTLEGGSGDDILATFGGADVIDGGEGQDNFVFYRALATTGL 523
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ G + V + + G+D +GG+ + +
Sbjct: 524 LIDMTVAATATGITLADGTVARNVERGL--GDTGSGNDTF----VGGLSFDVVSLGDGND 577
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G + + +++VG + +D + G N+V +G D G +G D +
Sbjct: 578 QADGGDGADYLEGKNGHDTLVGGADHDWLFGAEGNDVLNGGTGYDSLAGGAGDDLLVIDS 637
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
E V A ++ E L L
Sbjct: 638 QYDALTELADEGNDTV--AAWFSYQLTTNFENLVLMGGNNLYGAGNGL--------ANRL 687
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+G + G D+ + G + G+D ++
Sbjct: 688 TGNLGNNTLAGGGGNDTLAGGWGDDVY---AVDAGDVVTEKASEGTDTVWTLVNFNLSAN 744
Query: 432 KEGR--NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
E N + + G D + + D +
Sbjct: 745 VENLQFNGTGNFTGNGNGLANVITGNIGNDWLEGAGGNDTLIGGLGNDVFVIDADDVIVE 804
Query: 490 GSYDD---LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED---LINAFADA 543
+ + + GA H G + + A I + L
Sbjct: 805 AAGEGAEWVLAARSYTLGANLEHLGLTGSGD-FSATGNSANNIINGNSGKNLLTGGEGHD 863
Query: 544 PDLVQAGKD 552
G D
Sbjct: 864 RLDGGVGVD 872
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/310 (14%), Positives = 85/310 (27%), Gaps = 38/310 (12%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E ++ + N T S + + AD G+G T
Sbjct: 917 ETLTLTGTGNLNGTGNSLNNTIAGTSGHNVLDGGAGADKLVGGLGDDTYYV--------- 967
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+ + D+ + SV + + + + G + +
Sbjct: 968 ----------DNAGDNVVEQHWQGTDTVIASVSYSLLGRAAEVLTLTGSSNLNGTGNSL- 1016
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-- 248
GN + GDD + G
Sbjct: 1017 -------NNTLAGN---AGNNVLDGGAGADKLVGGLGDDTYYVDNAGDNVVEQHWQGTDT 1066
Query: 249 -----SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
S+S G + +T+ I + G+S +++ GNS NN +GND G G
Sbjct: 1067 VVSSVSYSLFGRAAEILTLTGSAHI-NATGNSLANMITGNSGNNQLDGGAGNDGLTGGLG 1125
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D F + A S + F A +++ + A + ++
Sbjct: 1126 ADIFLFSAASGKDTVADFSAAQNDSIDIHAYTGGVANNGMVSQAGGNVLINLGGGNTVTM 1185
Query: 364 YTASYEDLIQ 373
AS D++
Sbjct: 1186 LNASQADVLS 1195
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 56/494 (11%), Positives = 117/494 (23%), Gaps = 35/494 (7%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
FE + + NG + D G G
Sbjct: 664 NFENLVLMGGNNLYGAGNGLANRLTGNLGNNTLAGGGGNDTLAGGWGDDVYAVDA----- 718
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP-MVSD 187
G G D + +F S + + + + +++
Sbjct: 719 ---------GDVVTEKASEGTDTVWTLVNFNLSANVENLQFNGTGNFTGNGNGLANVITG 769
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI---GGVKNYID 244
+ + GA +V D+ + G + + G ++
Sbjct: 770 NIGNDWLEGAGGNDTLIGGLGNDVFVIDADDVIVEAAGEGAEWVLAARSYTLGANLEHLG 829
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L S G N I ++ + G G+D + G + G+D + +
Sbjct: 830 LTGSGDFSATGNSANNIINGNSGKNLLTGGEGHDRLDGGVGVDRMLGGLGDDTYYVDNAG 889
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D+ + F + + L+ ++ + +
Sbjct: 890 DSVGENHLEGSDIV--FASVSYSLAGRAVETLTLTGT-------GNLNGTGNSLNNTIAG 940
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGL-SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
T+ + L G D + + + G ++ + + + R A
Sbjct: 941 TSGHNVLDGGAGADKLVGGLGDDTYYVDNAGDNVVEQHWQGTDTVIASVSYSLLGRAAEV 1000
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF----SNFGCEEGR 479
G L A + L + +G D + + E
Sbjct: 1001 LTLTGSSNLNGTGNSLNNTLAGNAGNNVLDGGAGADKLVGGLGDDTYYVDNAGDNVVEQH 1060
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD---AFKALEYIASHEDL 536
+ D+ + SY + H G L+ A ++ L
Sbjct: 1061 WQGTDTVVSSVSYSLFGRAAEILTLTGSAHINATGNSLANMITGNSGNNQLDGGAGNDGL 1120
Query: 537 INAFADAPDLVQAG 550
L A
Sbjct: 1121 TGGLGADIFLFSAA 1134
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 48/327 (14%), Positives = 90/327 (27%), Gaps = 47/327 (14%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+S+ G + M + ESV+G SG+D V G + N+ G+D G SG D
Sbjct: 385 FSATGVAGQGMYVLGDEAAESVIGGSGDDTVYGAAGNDTVEGLGGSDQLFGESGDD--VL 442
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + D+L+ D+ LE + +
Sbjct: 443 NGGDETDGLIG--GSGADRLAGGNGGDYLT--------DEVSSISANLDNDTLEGGSGDD 492
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G DV + + F + + + G D+ + A +
Sbjct: 493 ILATFGGADVIDGGEGQDNF-------VFYRALATTGLLIDMTVAATATGITLADGTVAR 545
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
V+ G + + + D S + +
Sbjct: 546 NVERGLGDT----------------GSGNDTFVGGLSFDVVSLGDGNDQADGGDGADYLE 589
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
G V G+D + L ++ L D ++ +
Sbjct: 590 GKNGHDTLVGGADHDWLF------------GAEGNDVLNGGTGYDSLAGGAGDDLLVIDS 637
Query: 550 GKDHFSNFGYEEGRSITFNPDLYLTSY 576
D + E ++ LT+
Sbjct: 638 QYDALTELADEGNDTVAAWFSYQLTTN 664
>gi|329851021|ref|ZP_08265778.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
gi|328839867|gb|EGF89439.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
Length = 4917
Score = 77.9 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 68/325 (20%), Positives = 94/325 (28%), Gaps = 13/325 (4%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
T AD G I + I LG H G
Sbjct: 3770 GYDGNDTLSAGFGNDTLEGAQGADSIDGADGNDIIEGGDDADAITAGLGNDHVWGDAGSD 3829
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ D +D+ + + D G +SD + G N
Sbjct: 3830 VI---DAGGGSDTIEAGSGDDTVSGGAGDDTLTGDDGNDTLSDTSGTNWLDGGSGNDALN 3886
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
++ + T SGGDD L+ G + I N T++
Sbjct: 3887 GTGTVDGGTGNDNITVTGVGSGGDDNDTLSGSGTLS-----GDAGDDLISAGSGNDTLSG 3941
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++V SGND V G +V S GND G G DT Y P Y I E
Sbjct: 3942 GLGNDTVSAGSGNDDVTGGDGGDVLTGSFGNDTLSGGDGTDTAVYAGPRDQYTIVSDEAG 4001
Query: 325 IIVYD-----ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + D S VE L+FADQ ID I++ +A +D G D
Sbjct: 4002 GYIIVDNFPENGDEGTDHFSGVEYLQFADQLIDVTASNFGIIIDGSAIADDKTGTSGNDF 4061
Query: 380 FESMKHFYEFGLSEGRDITFDSYLY 404
+G D
Sbjct: 4062 LRGFGGQDSLTGLDGNDTLIGDDDG 4086
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 57/459 (12%), Positives = 106/459 (23%), Gaps = 44/459 (9%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI-GHALGL 134
+ + Y + + D+ G G T++ + + G A
Sbjct: 2427 TGSGDVTLTGSAYDDSIMGGATAEDIAAGAGQDIVSAGSGADTVIGGDGFDVLDGGADND 2486
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + G ND + ++ D++ + + +
Sbjct: 2487 SVSGDAGEDTILGGDGNDVVDGGGDADTLNGGDGDDTVSGGAGNDTISGGAG--TDLLDG 2544
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK----------NYID 244
GN ++ G+D + +
Sbjct: 2545 GLGNDTINGNGNLSGGDGNDSLSGTGQLFGDAGNDTVVASSGTADGGEGHDAVYVNGGTG 2604
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
E ++ G + + + + GSSG D +IG N+ GNDV G SG
Sbjct: 2605 RGGEGHDTLYGQSSDDYLDGGLGEDQLYGSSGADTLIGGQNNDTLSGGGGNDVIYGGSGS 2664
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDA---------------------NEHKQDFLSDVER 343
D ++ Y I I + D L VE
Sbjct: 2665 DRAYFSGYIAGYVIDNVAGHITITGGAYVITYDVDGDGFVTGEIVVNGPDGSDTLFGVEA 2724
Query: 344 LRFADQCIDSV----------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
L F+D + I+ + + G D + ++
Sbjct: 2725 LVFSDVELAVQPYSNVGLVLNGTSGDDIIFGDIGNDTVTGNGGHDRLIGDQGDDSLSGND 2784
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
G D+ + A G + + LI
Sbjct: 2785 GNDVLYGDGGNDSLNGGAGQDHIYAGEGADSVTAGDGNDTVDGDHGGDTIAGGLGDDSLI 2844
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ + G D S + S
Sbjct: 2845 GGTGNDTVAGEGGNDTISGDAGTNQLAGGEGADYITNSG 2883
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 71/499 (14%), Positives = 118/499 (23%), Gaps = 28/499 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+D + +G + + + AD G G T+ + I LG
Sbjct: 2781 SGNDGNDVLYGDGGNDSLNGGAGQDHIYAGEGADSVTAGDGNDTVDGDHGGDTIAGGLGD 2840
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G V G + + + S AT +
Sbjct: 2841 DSLIGGTGNDTVAGEGGNDTISGDAGTNQLAGGEGADYITNSGDGTAT----GDAGNDYL 2896
Query: 195 YGAPKGSLGNN---IYKIEVQQKDS--------PFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+G S G + IY + Q D G D L
Sbjct: 2897 WGNGALSGGTDNDIIYAWNLGQGDGGHDALYVVHGGTGEGGEGNDTLAGWDPYYADGVQT 2956
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
I G + +++ T ++V G +G+D V G N++ + GND G G
Sbjct: 2957 LDGGAGDDVIAGNHGDDSLSGGTGNDTVNGGTGDDSVDGGEDNDLLVGAGGNDSLAGGLG 3016
Query: 304 LDTFFYYAPSYLYKIY--RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
DT Y Y + V + + +D L VE FAD + + I
Sbjct: 3017 SDTAAYDGDRVYYSVIQDGVGGYFTVANRSGEGEDALDGVETAAFADVNLALNSGTAGEI 3076
Query: 362 LEYTASYEDLIQV---------IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
A L G D +G D Y Y D
Sbjct: 3077 HTGDADGNSLAGGGLDDSLVGLGGDDTVSGGNGNDIVRGGDGNDSVLAGSGYDVVYGDAG 3136
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--F 470
+ + G D + + L
Sbjct: 3137 DDHVDAGTGEDQVRGGDGNDTVLGGDDNDTVYGDGGTDSLSGGDGADALYGNGTISGGTG 3196
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
++ G D + + G + + + L
Sbjct: 3197 NDLIHGSGTLSGDDGADTIELTGAAQVFGGDGNDTISEIWPYFADQSVSGEAGDDVLNSG 3256
Query: 531 ASHEDLINAFADAPDLVQA 549
++ L +
Sbjct: 3257 YGNDTLSGGIGNDTQGGGE 3275
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 63/527 (11%), Positives = 118/527 (22%), Gaps = 53/527 (10%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ TP I + +D G T+ ++ ++ G
Sbjct: 607 APGGIDTLTGIETLQFYTPDPADGPVAIIGTNGSDTLTGGAFNDTVYGYDGNDDVSGLAG 666
Query: 134 LMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G ND N V++ D + D +
Sbjct: 667 NDSLSAGSGDDSLDGGAGNDVLNGGSGLDVLNGGDGDDVITDEEGASAVDAGGGNDY--V 724
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G+ G G++ TI G+D +D + +
Sbjct: 725 TASGSISGGAGDDSL---YSANYGTAGDTIDGGEGNDTVDASENNSDSANLLTGGLGDDY 781
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF---- 308
+ G + + I+ +++ +G D + G N+ S G+DV + G DT +
Sbjct: 782 LTGADYDDDISGGDGNDALYAGNGADTLTGGEGNDYISTSDGDDVINTGLGDDTVYSSGR 841
Query: 309 -----------------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
A + IY + + D+ D
Sbjct: 842 SNLTTGDGNDYINGNGAVDAGAGDDTIYGYNGSDAAGDSVSGGDGNDYIQATSYNTDSAN 901
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
++ + + G D G D + Y
Sbjct: 902 TIDGGAGDDSIQGGNKADIITAGSGDDTIYGGDGNDAIDGGLGLDSISMNGNYDDFAVIY 961
Query: 412 RNVFGSDRGAAARHYITHGVK--------EGRNPDAFKALEYIASHEDLINAFADAPDLV 463
+V S R + G + + D N +
Sbjct: 962 DDVTDSYTITDTREWSDAGTDTITGVEIISFYDRAITGEGKVFVGTSDADNLNGTGANDT 1021
Query: 464 QVGKDH----FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH---------- 509
+ + N G + D Y S DD A H
Sbjct: 1022 ITALEGNDYLYGNGGADSVDAGAGDDTFYGSSGDDTVLGGDGADNIDAGHGNNSISGGAD 1081
Query: 510 ----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
Y+ +G + + + + D
Sbjct: 1082 NDYIYLQNGNDTAEGGSGDDYVYGGRGNNSMSGGDGNDSLYGAGALD 1128
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 72/513 (14%), Positives = 128/513 (24%), Gaps = 31/513 (6%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
S + + I+ S N T + +KAD+ G G TI
Sbjct: 874 SDAAGDSVSGGDGNDYIQATSYNTDSANTIDGGAGDDSIQGGNKADIITAGSGDDTIYGG 933
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
+ I LGL + +D + +T + +
Sbjct: 934 DGNDAIDGGLGLDSISMNGNYDDFAVIYDDVTDSYTITDTREWSDAGTDTITGVEIISFY 993
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIG 237
+ + +L +Y +GG D +D T G
Sbjct: 994 DRAITGEGKVFVGTSDADNLNGT--GANDTITALEGNDYLYGNGGADSVDAGAGDDTFYG 1051
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ L + +I N +I+ + + +GND G S ++ + GN+
Sbjct: 1052 SSGDDTVLGGDGADNIDAGHGNNSISGGADNDYIYLQNGNDTAEGGSGDDYVYGGRGNNS 1111
Query: 298 FDGSSGLDTFFYYA-----------------PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G G D+ + S A ++
Sbjct: 1112 MSGGDGNDSLYGAGALDGGEGNDYLDNYGWSSSSTLGATLTGGAGNDSLYGNENNTDSAN 1171
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF---GLSEGRDI 397
V D I N +++E + + + G D ++ F E +
Sbjct: 1172 VMSGGDGDDYISGANADGDNVIEAGSGDDTIYSGDGNDTIDAGLGFDSVIIQSYMEYFTL 1231
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
D + + D R+ + +G + ++ A E L+ A
Sbjct: 1232 DRDDVTGVVTITDNRSGMNGATDVITNAEVIQFY-DGEAVFDGEVIDGTADSEQLVGTIA 1290
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
D G D G E+ G G G + Y G
Sbjct: 1291 DDTITAFDGNDTVYAGGGEDSVDAGEGEDYVSGGGSHDTVTGG---GGNDQVYGELGDDS 1347
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
L + L G
Sbjct: 1348 ISGGTGADTLYGEDGDDTLSGGDDADFIDAGYG 1380
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/377 (14%), Positives = 99/377 (26%), Gaps = 38/377 (10%)
Query: 214 KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
QT+ G D + D + GG + ++ G N T++ ++
Sbjct: 2262 GGFDGAQTLLGGAGSDTIAANWGDDSAAGGEGDDQITGYYGNDTLSGDAGNDTLSDNSGS 2321
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
S+ G +GND+V G N+ +D G G D + + + V
Sbjct: 2322 NSLSGGAGNDLVSGGDDNDTLSGGVDDDTLTGGLGNDVIDGGDGTDVTGLSGNRALYSVI 2381
Query: 329 -----------DANEHKQDFLSDVERLRFAD-----------------QCIDSVNVKQRS 360
+ D L+ VE +RFAD +
Sbjct: 2382 RDGAGGYYAVNNRGTDGSDHLTAVEIVRFADSDLVVSAGNTGTIITGSGDVTLTGSAYDD 2441
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ A+ ED+ GQD+ + +G D+ D
Sbjct: 2442 SIMGGATAEDIAAGAGQDIVSAGSGADTVIGGDGFDVLDGGADNDSVSGDAGEDTILGGD 2501
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR- 479
D + A ++ + +G D + G G
Sbjct: 2502 GNDVVDGGGDADTLNGGDGDDTVSGGAGNDTISGGAGTDLLDGGLGNDTINGNGNLSGGD 2561
Query: 480 ----FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
D + G+ G + GR + L +S +
Sbjct: 2562 GNDSLSGTGQLFGDAGNDTVVASSGTADGGEGHDAVYVNGGTGRGGEGHDTLYGQSSDDY 2621
Query: 536 LINAFADAPDLVQAGKD 552
L + +G D
Sbjct: 2622 LDGGLGEDQLYGSSGAD 2638
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/432 (13%), Positives = 107/432 (24%), Gaps = 37/432 (8%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
NDS + D + + +YG +
Sbjct: 1580 GNDSVTADQGDDSVEGGGGNDTVYAGNGADTIDGGADNDLLYGESGNDSLSGGMG-NDTV 1638
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+D + T+ G D L + D + + + +T+ + +
Sbjct: 1639 EDYSGVNTMSGGAGSDSLTGAGTLDGGDDNDTLSAYY-----AGQAVTLLGGAGADLIYS 1693
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----- 328
S +D V G + ++ GND G G DT A + + E ++
Sbjct: 1694 SGASDSVDGGTGDDTVHVYGGNDTVVGGDGRDTLVIAAYRSEFSVSYDEGTGVITLTDLR 1753
Query: 329 DANEHKQDFLSDVERLRFADQCIDS-----------------VNVKQRSILEYTASYEDL 371
+ L+ +E L F D + + L + +
Sbjct: 1754 VGSPWGTKTLTGIEILSFYDDIVSTPLNTGSPVTGTAVSETLAGTSGDDTLSGLEGADTI 1813
Query: 372 IQVIGQDVFESMKHFY---------EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
IG D + +EG D + N + +
Sbjct: 1814 TAGIGNDSADGGDGADIIYGSYGEDSLSGAEGNDTLYGETGQDELSGGTGNDYLAGGNGN 1873
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
G + + ++ + + D G D G G
Sbjct: 1874 DTADGGDGQDQLYGEAGDDSTSGGDGNDYVNDTTGDNTLAGGSGSDTLVGSGSLSGGEGD 1933
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
+ Y D N A Y G + R L+ ++ L+ A
Sbjct: 1934 DQVTVAGEGYGDAGNDSVDGGAGAESLYGGAGDDKLRGMAGADLLDGGDGNDILLGDSAQ 1993
Query: 543 APDLVQAGKDHF 554
+ AG +
Sbjct: 1994 DGNDTIAGGSGY 2005
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 68/435 (15%), Positives = 113/435 (25%), Gaps = 40/435 (9%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
++ G T+ I +G +G +YG + +
Sbjct: 1788 GTAVSETLAGTSGDDTLSGLEGADTITAGIGNDSADGGDGADIIYGSYGEDSLSGAEGND 1847
Query: 163 MSYFMPQDSMMDASFGYCATPM-----VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
Y + G +D Q G + D+
Sbjct: 1848 TLYGETGQDELSGGTGNDYLAGGNGNDTADGGDGQDQLYGEAGDDSTSGGDGNDYVNDTT 1907
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
T+ G D L + D G N ++ ES+ G +G+
Sbjct: 1908 GDNTLAGGSGSDTL-VGSGSLSGGEGDDQVTVAGEGYGDAGNDSVDGGAGAESLYGGAGD 1966
Query: 278 DVVIGNSANNVFFES------------SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
D + G + ++ GND G SG D Y + Y I
Sbjct: 1967 DKLRGMAGADLLDGGDGNDILLGDSAQDGNDTIAGGSGYDVAIYSGNASDYTISTVGGVT 2026
Query: 326 IVYD---ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ--------V 374
V D D L+ VE L F D + + ++ T + + + +
Sbjct: 2027 TVTDNRPGAPEGSDELTGVELLMFDDGEYELIAPAAGVVVIGTGADDVIPGPVPFNALDL 2086
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGA-AARHYIT 428
G D ++ + G D+ D D L G D A + +
Sbjct: 2087 TGSDTIDAGSGGDQVEAGSGHDVVLGRLANDVLNGEYGNDTLIGGSGDDTLLGATGNDVL 2146
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+G + A H D D + G E R +
Sbjct: 2147 YGSDGAAGGYSDDADGNTDGHPDFDRDSLDGG-----AGNDTLIGGNGEDRLTDWAGNNL 2201
Query: 489 LGSYDDLRNVFGSDR 503
L DD + G+
Sbjct: 2202 LQGGDDGDVLIGNGT 2216
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 69/457 (15%), Positives = 125/457 (27%), Gaps = 20/457 (4%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D S ITE ++ ++ V+ + E ++ + N
Sbjct: 4114 DTYVIDDNSDLITEAGSAGTDLVLSDAADY--VLAVNVENLNLQGPGHINGTGNALANII 4171
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH---PGSYNGGYPVYGV 149
+S + D G+G T+ A + G
Sbjct: 4172 TGNSGNNVLTGGAGDDTITGGLGNDTVAFSGARSAYDVTVSGGVYTVHGPDGTETVSGVE 4231
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ + +F S + P + G M + A G +
Sbjct: 4232 YIRFADGTFEISAVLQVAPVAADQAIGGGIEDEAMAGTVTATD---GDGDTLTYAIVAGP 4288
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T + D D + + N IA + +
Sbjct: 4289 AHGTVTAFDPATGAFTYTPDAGYYGTDSFTFRANDGFEDGNIATVSLTLNHLIAGTSGND 4348
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+ GS ++V+ G ++ +G D G G DT+ + + +A
Sbjct: 4349 SLAGSGLDEVLRGLGGHDSLDGGAGIDTLIGGDGNDTYVI---ADSDTVVEAADAGSDTV 4405
Query: 330 ANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ ++VE L I+ +++ L +G D F
Sbjct: 4406 EASITYNLGTNVENLTLTGSANINGTGNAGDNVVTGNTGVNVLTGGLGNDTFWVQNATDT 4465
Query: 389 F--GLSEGRDITFDSYLY--LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
EG D+ S Y +G Y + ++ GSD A +G N +A L
Sbjct: 4466 VVEANGEGNDLIVASVSYSLVGRYAERLSLTGSDDLTATG----NGQFNALNGNAGHNLV 4521
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ D + A V N +EG
Sbjct: 4522 DGGAGNDTMAGGAGNDTFVVNTTGDVVNENADEGTDT 4558
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 73/469 (15%), Positives = 125/469 (26%), Gaps = 64/469 (13%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
ET+ +D+ ++ D+ D G T+ N +
Sbjct: 3056 VETAAFADVNLALNSGTAGEIHTGDADGNSLAGGGLDDSLVGLGGDDTVSGGNGNDIVRG 3115
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM--------SYFMPQDSMMDASFGYCAT 182
G + +G VYG D D+ + D+ G +
Sbjct: 3116 GDGNDSVLAGSGYDVVYGDAGDDHVDAGTGEDQVRGGDGNDTVLGGDDNDTVYGDGGTDS 3175
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI--------YDSGGDDLL--- 231
D G G GN++ TI + G+D +
Sbjct: 3176 LSGGDGADALYGNGTISGGTGNDLIHGSGTLSGDDGADTIELTGAAQVFGGDGNDTISEI 3235
Query: 232 -----DLTLIGGVKNYIDLNTESWSSIGGYEKNMT------------------------- 261
D ++ G + + + ++ G N T
Sbjct: 3236 WPYFADQSVSGEAGDDVLNSGYGNDTLSGGIGNDTQGGGENDDSLAGDDGDDLLDGGNGY 3295
Query: 262 --IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +++ G G+D + GN+ N+ F+ GND G G+D + Y I
Sbjct: 3296 DRVEGGDGNDTIHGGGGDDRMFGNAGNDAFYAEGGNDKIYGGGGVDVAHFSGNRNDYTIV 3355
Query: 320 RFENAIIVYD---ANEHKQDFLSDVERLRFADQCIDSV--------NVKQRSILEYTASY 368
IIV D QD L V L FAD V + +S
Sbjct: 3356 EDGGVIIVTDNRGGTPEGQDTLYGVYTLVFADGDYQGVPNYGYTYTGSTGNDTISDHSSD 3415
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ G + ++ G D + + N Y
Sbjct: 3416 DVTSDRPGSN--DASSGDDTIWAGAGNDSISGLAGGDEIHGEDGNDTVEGGTEPDLVYGE 3473
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
G D L+ ++ L + L G D+ S ++
Sbjct: 3474 AGDDLLNGGDEDDRLDGGDDNDVLNGGGGEDYLLGGDGHDNLSGGDQDD 3522
Score = 58.3 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 49/330 (14%), Positives = 83/330 (25%), Gaps = 22/330 (6%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ +G + + + + + GND + G ++ GND G G D
Sbjct: 518 GGLNFLGTSYHDDLLGTQSG-DILSAGEGNDTLTGGLGDDTLTGGLGNDSLAGGDGTDVA 576
Query: 308 FYYAPSYLYKIYRFENAIIVY-------DANEHKQDFLSDVERLRF-----ADQCIDSVN 355
+ Y + +VY D D L+ +E L+F AD + +
Sbjct: 577 RFDGLESDYAVSEETIEGVVYTYVADNRDNAPGGIDTLTGIETLQFYTPDPADGPVAIIG 636
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
L A + + G D + G DS D L
Sbjct: 637 TNGSDTLTGGAFNDTVYGYDGNDDVSGLAGNDSLSAGSGD----DSLDGGAGNDVLNGGS 692
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
G D +EG + + I+ A L +
Sbjct: 693 GLDVLNGGDGDDVITDEEGASAVDAGGGNDYVTASGSISGGAGDDSLYSANYGTAGDTID 752
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT-----HGVKEGRNPDAFKALEYI 530
T D+ +L D Y G + L
Sbjct: 753 GGEGNDTVDASENNSDSANLLTGGLGDDYLTGADYDDDISGGDGNDALYAGNGADTLTGG 812
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
++ + + D G D + G
Sbjct: 813 EGNDYISTSDGDDVINTGLGDDTVYSSGRS 842
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 72/492 (14%), Positives = 126/492 (25%), Gaps = 30/492 (6%)
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
++T D S +G T D+ + D G+G T+ + +
Sbjct: 3899 NITVTGVGSGGDDNDTLSGSG---TLSGDAGDDLISAGSGNDTLSGGLGNDTVSAGSGN- 3954
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
GG + + ND+ + D
Sbjct: 3955 -----------DDVTGGDGGDVLTGSFGNDTLSGGDGTDTAVYAGPRDQYTIVSDEAGGY 4003
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
IV G+ + F + D + + + G
Sbjct: 4004 IIVD-------NFPENGDEGTDHFSGVEYLQFADQLIDVTASN-FGIIIDGSAIADDKTG 4055
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T + G+ ++ ++++G D + G + ++V SG D G SG DT
Sbjct: 4056 TSGNDFLRGFGGQDSLTGLDGNDTLIGDDDGDSLTGGAGSDVLNGGSGIDTLIGGSGDDT 4115
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYT 365
+ S L +V +VE L I+ +I+
Sbjct: 4116 YVIDDNSDLITEAGSAGTDLVLSDAAD-YVLAVNVENLNLQGPGHINGTGNALANIITGN 4174
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGR---DITFDSYLYLGSYDD-LRNVFGSDRGA 421
+ L G D S R D+T +Y D V G +
Sbjct: 4175 SGNNVLTGGAGDDTITGGLGNDTVAFSGARSAYDVTVSGGVYTVHGPDGTETVSGVEYIR 4234
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
A P A ++ + A D + G G
Sbjct: 4235 FADGTFEISAVLQVAPVAADQAIGGGIEDEAMAGTVTATDGDGDTLTYAIVAGPAHGTVT 4294
Query: 482 TFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
FD +Y +G+D A G + + + ++ L +
Sbjct: 4295 AFDPATGAFTYTPDAGYYGTDSFTFRANDGFEDGNIATVSLTLNHLIAGTSGNDSLAGSG 4354
Query: 541 ADAPDLVQAGKD 552
D G D
Sbjct: 4355 LDEVLRGLGGHD 4366
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 56/445 (12%), Positives = 102/445 (22%), Gaps = 51/445 (11%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---------- 133
+ Y + AD G G I + + I LG
Sbjct: 783 TGADYDDDISGGDGNDALYAGNGADTLTGGEGNDYISTSDGDDVINTGLGDDTVYSSGRS 842
Query: 134 -LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
L + VD +D+ S Y + A
Sbjct: 843 NLTTGDGNDYINGNGAVDAGAGDDTIYGYNGSDAAGDSVSGGDGNDYIQATSYNTDSANT 902
Query: 193 KIYGAPKGSLGN-------NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-- 243
GA S+ + I G D + + I
Sbjct: 903 IDGGAGDDSIQGGNKADIITAGSGDDTIYGGDGNDAIDGGLGLDSISMNGNYDDFAVIYD 962
Query: 244 ---DLNTESWSSIGGYEKNMTIAQHTVI--------------------ESVVGSSGNDVV 280
D T + + TI +I +++ G+ ND +
Sbjct: 963 DVTDSYTITDTREWSDAGTDTITGVEIISFYDRAITGEGKVFVGTSDADNLNGTGANDTI 1022
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEH 333
N+ + + G D D +G DTF+ I + ++
Sbjct: 1023 TALEGNDYLYGNGGADSVDAGAGDDTFYGSSGDDTVLGGDGADNIDAGHGNNSISGGADN 1082
Query: 334 KQDFLSDVER-LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+L + + + + + L D E + +G S
Sbjct: 1083 DYIYLQNGNDTAEGGSGDDYVYGGRGNNSMSGGDGNDSLYGAGALDGGEGNDYLDNYGWS 1142
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
+ G+ N +D G N D +E + + +
Sbjct: 1143 SSSTLGATLTGGAGNDSLYGNENNTDSANVMSGGDGDDYISGANADGDNVIEAGSGDDTI 1202
Query: 453 INAFADAPDLVQVGKDHFSNFGCEE 477
+ + +G D E
Sbjct: 1203 YSGDGNDTIDAGLGFDSVIIQSYME 1227
Score = 53.6 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 65/492 (13%), Positives = 114/492 (23%), Gaps = 33/492 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE------- 127
+ N T + ++ ++ G G + L
Sbjct: 3525 DGGAGNDTVNGNAGADTVLGGEGADLVVDSQGDNLLSGGGGNDIVSGTGDLRGDDGDDVL 3584
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
G G + G N G D + + D + +
Sbjct: 3585 TGSGTGSLDGGDGNDTVSGSGTLGGGAGDDVINGSSAADSINGGDGDDTVNIAGSRAGYA 3644
Query: 188 IVAVQKIYGAPKGSLG--NNIYKIEVQQ-KDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+VA + Y + S G + I +E D T D L G + +
Sbjct: 3645 LVADEGDYLLIRLSDGVTDTITGVEHLIFGDGEAALTGGDVVDGTTASEALTGSANDDLI 3704
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGS-SGNDVVIGNSANNVFFESSGNDVFDGSSG 303
E +I G N I +S+ G SGND + N+ SG+D+ +G
Sbjct: 3705 TGGEGGDTILGLGGNDVIISGDGDDSLSGGISGNDRIEAGDGNDTVDGLSGDDIVLAGAG 3764
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D F N + D + + D +
Sbjct: 3765 DD-LVLGYDGNDTLSAGFGNDTLEGAQGADSIDGADGNDIIEGGDDADAITAGLGNDHVW 3823
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
A + + G D E+ G D G D
Sbjct: 3824 GDAGSDVIDAGGGSDTIEAGSGDDTVSGGAGDDTL----------------TGDDGNDTL 3867
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+G + + + + +
Sbjct: 3868 SDTSGTNWLDGGSGNDALNGTGTVDGGTGNDNITVTGVGSGGDDNDTLSGSGTLSGDAGD 3927
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
D D L G+D +A G + D L ++ L
Sbjct: 3928 DLISAGSGNDTLSGGLGNDTVSA-----GSGNDDVTGGDGGDVLTGSFGNDTLSGGDGTD 3982
Query: 544 PDLVQAGKDHFS 555
+ +D ++
Sbjct: 3983 TAVYAGPRDQYT 3994
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/402 (12%), Positives = 87/402 (21%), Gaps = 21/402 (5%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHP 137
+ + T + D G G I + + G L
Sbjct: 2259 YGAGGFDGAQTLLGGAGSDTIAANWGDDSAAGGEGDDQITGYYGNDTLSGDAGNDTLSDN 2318
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS--DIVAVQKIY 195
N G D D T + + + + +Y
Sbjct: 2319 SGSNSLSGGAGNDLVSGGDDNDTLSGGVDDDTLTGGLGNDVIDGGDGTDVTGLSGNRALY 2378
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ G S + + D + G I ++ G
Sbjct: 2379 SVIRDGAGGYYAVNNRGTDGSDHLTAVEIVRFADSDLVVSAGNTGTII--TGSGDVTLTG 2436
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ +I E + +G D+V S + G DV DG + D+ +
Sbjct: 2437 SAYDDSIMGGATAEDIAAGAGQDIVSAGSGADTVIGGDGFDVLDGGADNDSV--SGDAGE 2494
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
I + +V + L D + A + L +
Sbjct: 2495 DTILGGDGNDVVDGGGDADT--------LNGGDGDDTVSGGAGNDTISGGAGTDLLDGGL 2546
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGS-YDDLRNVFGSDRGAAARHYITHGVKEG 434
G D +G D + G +D H +
Sbjct: 2547 GNDTIN---GNGNLSGGDGNDSLSGTGQLFGDAGNDTVVASSGTADGGEGHDAVYVNGGT 2603
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
Y S +D ++ L G
Sbjct: 2604 GRGGEGHDTLYGQSSDDYLDGGLGEDQLYGSSGADTLIGGQN 2645
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/406 (12%), Positives = 95/406 (23%), Gaps = 23/406 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + G + D+ D+ G G T+ + + LG
Sbjct: 3489 DGGDDNDVLNGGGGEDYLLGGDGHDNLSGGDQDDLLDGGAGNDTVNGNAGADTV---LGG 3545
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ ND + D ++ S +
Sbjct: 3546 EGADLVVDSQGDNLLSGGGGNDIVSGTGDLRGDDGDDVLTGSGTGSLDGGDGNDTV---- 3601
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI----------- 243
GS + S +I GDD +++ +
Sbjct: 3602 ----SGSGTLGGGAGDDVINGSSAADSINGGDGDDTVNIAGSRAGYALVADEGDYLLIRL 3657
Query: 244 -DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
D T++ + + A T + V G++ ++ + G++ +++ G D G
Sbjct: 3658 SDGVTDTITGVEHLIFGDGEAALTGGDVVDGTTASEALTGSANDDLITGGEGGDTILGLG 3717
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D N I D LS + + + L
Sbjct: 3718 GNDVIISGDGDDSLSGGISGNDRIEAGDGNDTVDGLSGDDIVLAGAGDDLVLGYDGNDTL 3777
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L G D + + D + D + G +
Sbjct: 3778 SAGFGNDTLEGAQGADSIDGADGNDIIEGGDDADAITAGLGNDHVWGDAGSDVIDAGGGS 3837
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
G L ++ L + G D
Sbjct: 3838 DTIEAGSGDDTVSGGAGDDTLTGDDGNDTLSDTSGTNWLDGGSGND 3883
Score = 45.2 bits (105), Expect = 0.038, Method: Composition-based stats.
Identities = 54/322 (16%), Positives = 78/322 (24%), Gaps = 8/322 (2%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
DS Y E N D A+V G G I NA + G Y+G
Sbjct: 1156 GNDSLYGNENNTDSANVMSGGDGDDYISGANADGDNVIEAGSGDDTIYSGDGNDTIDAGL 1215
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ + S M YF + +
Sbjct: 1216 GFDSVIIQSYMEYFTLDRDDVTGVVTITDNRSGMNGATDVITNAEVIQFYDGEAVFDGEV 1275
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ + + + DD + S+ E ++ ++V
Sbjct: 1276 IDGTADSEQLVGTIADDTITAFDGNDTV----YAGGGEDSVDAGEGEDYVSGGGSHDTVT 1331
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND V G ++ +G D G G DT + +
Sbjct: 1332 GGGGNDQVYGELGDDSISGGTGADTLYGEDGDDTL---SGGDDADFIDAGYGDGNSVTGD 1388
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D L L D V YTA LI G D G
Sbjct: 1389 AGNDTLYGAGTLD-GGDGDDHVQTNYYYWGGYTAVGSHLIGGDGNDTLVGHSGNSGEGGV 1447
Query: 393 EGRDITFDSYLYLGSYDDLRNV 414
T + L G +D
Sbjct: 1448 SSAITTLPNTLEGGEGNDSITG 1469
Score = 40.9 bits (94), Expect = 0.64, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 65/257 (25%), Gaps = 15/257 (5%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV-G 273
T+ G+D + G V N + ++T +E++V
Sbjct: 4523 GGAGNDTMAGGAGNDTFVVNTTGDVV-----NENADEGTDTVRSSVTFTLGANLENLVLT 4577
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GN NN + ++ G +G DT++ E +V + +
Sbjct: 4578 GLAAVSGTGNGLNNSLTGNIAVNILTGGAGDDTYYIQTVGDTVVEVSGEGNDLVVSSVSY 4637
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
VE L + L G ++ + + F +
Sbjct: 4638 DL-NGRHVETLTLTGSANIDGT--------GNSLANMLNGNAGNNLLDGGAGYDTFAGGD 4688
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
G D + + L + +A H A + L
Sbjct: 4689 GNDTYIVNLSSEIVTEGLNQGTDTVLSSATFTLGDHLENLTLTGTANIRATGNGLNNVLT 4748
Query: 454 NAFADAPDLVQVGKDHF 470
+G D +
Sbjct: 4749 GNDGINILTGGLGNDSY 4765
Score = 39.4 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 38/115 (33%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D T G + ++ G E + +S+VG D + G + N+
Sbjct: 14 DDTFSGAGGEDSAHGNDGNDTLSGGENRDYLHGDGGNDSLVGGEWGDYLYGGTGNDTLVG 73
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
G DV G G D F + Y + V D + + ++ + F
Sbjct: 74 GVGVDVLHGGEGDDRFVFTFGDSTDWDYIRVSEGSVGDNDVIEILGDVSIDDVTF 128
>gi|300868523|ref|ZP_07113142.1| hypothetical protein OSCI_3720049 [Oscillatoria sp. PCC 6506]
gi|300333512|emb|CBN58330.1| hypothetical protein OSCI_3720049 [Oscillatoria sp. PCC 6506]
Length = 1633
Score = 77.9 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 58/200 (29%), Gaps = 16/200 (8%)
Query: 200 GSLGN--NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ GN + + + G+D + GG + I E I G
Sbjct: 1376 SNSGNIFDAKSGDDNLYGGDSKDIFNGNQGND----FITGGNSDDILYGDEDNDIILGEL 1431
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N I +S+ G ND++ GN ++ NDV G G DT
Sbjct: 1432 GNDLIFGGKGSDSLNGREANDIIFGNKDDDFIDGGKENDVLYGGQGNDTIL--GSEGNDN 1489
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
++ ++ + D +S E Q + + + + G
Sbjct: 1490 LFGQLDSDTICGG--VGDDLISGNE------QDDILGGCEGNDTIYGGEDNDTITGGKGN 1541
Query: 378 DVFESMKHFYEFGLSEGRDI 397
D+ G DI
Sbjct: 1542 DILHGDLGNDSLTGGSGNDI 1561
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 29/211 (13%), Positives = 59/211 (27%), Gaps = 12/211 (5%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E+ + +++ IG +N+ F S+ ++FD SG D + + +
Sbjct: 1352 VENTIIGIPDEIQIGTPSNDKFLGSNSGNIFDAKSGDDNLY--GGDSKDIFNGNQGNDFI 1409
Query: 328 YDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
N + D + + K L + + + D + K
Sbjct: 1410 TGGNSDDILYGDEDNDIILGELGNDLIFGGKGSDSLNGREANDIIFGNKDDDFIDGGKEN 1469
Query: 387 YEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG----RNP 437
+G D D+ D + G D + G EG
Sbjct: 1470 DVLYGGQGNDTILGSEGNDNLFGQLDSDTICGGVGDDLISGNEQDDILGGCEGNDTIYGG 1529
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKD 468
+ + ++ L + G D
Sbjct: 1530 EDNDTITGGKGNDILHGDLGNDSLTGGSGND 1560
Score = 37.1 bits (84), Expect = 9.0, Method: Composition-based stats.
Identities = 24/213 (11%), Positives = 44/213 (20%), Gaps = 3/213 (1%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ + S G D F ++G D Y D N
Sbjct: 1365 IGTPSNDKFLGSNSGNIFDAKSGDDNLYGGDSKDIFNGNQGNDFITGGNSDDILYGDEDN 1424
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ G +A + + + + G D
Sbjct: 1425 DIILGELGNDLIFGGKGSDSLNGREANDIIFGNKDDDFIDGGKENDVLYGGQGNDTILGS 1484
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
+ F DS G D G + + +
Sbjct: 1485 EGNDNLFGQLDSDTICGGVGDDLISGNEQDDILG---GCEGNDTIYGGEDNDTITGGKGN 1541
Query: 534 EDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ L + +G D F+ +I+
Sbjct: 1542 DILHGDLGNDSLTGGSGNDIFALKAGHGFDTIS 1574
>gi|119483461|ref|ZP_01618875.1| hypothetical protein L8106_05391 [Lyngbya sp. PCC 8106]
gi|119458228|gb|EAW39350.1| hypothetical protein L8106_05391 [Lyngbya sp. PCC 8106]
Length = 1299
Score = 77.9 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 60/356 (16%), Positives = 101/356 (28%), Gaps = 25/356 (7%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++ N + + + G L L LNT + G +
Sbjct: 801 NIDNGSIRFDGDGPAGEDGFLFAVTDGIGTLPQALFSIALVDRTLNTIPGKATTGGDLGE 860
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I V ++++G G DV+ G N+ +GNDV DG SG D +
Sbjct: 861 AIIGTDVDDTILGGGGRDVIRGLDGNDSLDGGTGNDVIDGGSGDD--VQLGQEGNDSLVG 918
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ D + + L+ D + + +IL+ ++L +G D
Sbjct: 919 GSGNDLL--------DGGAGINTLQGNDGNDVLIGGNESNILDGGKGNDNLSSGLGSDSL 970
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN---P 437
+ G D G +D G+D EG +
Sbjct: 971 VGGIGDDTVNGNAGDDTL------RGDQEDPTLPGGNDLVLGGAGRDFMRGGEGDDTILG 1024
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE-GRFVTFDSYLYLGSYDDLR 496
+ Y D I+ LV + G + V DS D L
Sbjct: 1025 QDNSDVIYGDRGSDSISGDQGDDILVGDTGISSLSGGNDTITGGVGNDSIFGEKGNDSLI 1084
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G D + +E + A ++ + D AG D
Sbjct: 1085 GEQGQDSIFGGDNDDVIFGRE-----DNDLMFGDAGNDTIRAGIGDDTLAGGAGGD 1135
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 44/265 (16%), Positives = 78/265 (29%), Gaps = 20/265 (7%)
Query: 220 QTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+I S G+D++D ++ G N +E + G N T+ T + + G
Sbjct: 274 DSITGSSGEDVIDGLEGNDSIFGLAGNDQIQGSEGIDFLFGNTDNDTLEGGTGNDQIYGG 333
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+D ++G+ ++ F + G D G G D + +
Sbjct: 334 KQSDRLVGDDGDDGLFGNLGEDTLLGGQGRDVMY----GGQANDSLRGGLDDDLVLGDKD 389
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D + E ++ + L+ G D + EG
Sbjct: 390 NDVVWGDE------GNDSVYGGSGEDLIFGNDGADSLLGDNGNDTIFAGTGSDTALGGEG 443
Query: 395 RD-----ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
D + D D L GSD A A ++E F+ ++I
Sbjct: 444 NDQISGELGSDFLFGGEGADTLAGGTGSDTFAIAEGTGGQSIEEANIVQDFQPDDFIGLA 503
Query: 450 EDLINAFADAPDLVQVGKDHFSNFG 474
L + D + D G
Sbjct: 504 GGLNFSDLDISQSSENAGDTIIRRG 528
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/285 (16%), Positives = 80/285 (28%), Gaps = 36/285 (12%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + L I G + N ++ T + + G SG+DV +G N+ SGND
Sbjct: 864 GTDVDDTILGGGGRDVIRGLDGNDSLDGGTGNDVIDGGSGDDVQLGQEGNDSLVGGSGND 923
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK-QDFLSDVERLRFADQCIDSVN 355
+ DG +G++T + + ++ NE D + L V
Sbjct: 924 LLDGGAGINT-----------LQGNDGNDVLIGGNESNILDGGKGNDNLSSGLGSDSLVG 972
Query: 356 VKQRSILEYTASYEDLIQVI-------GQDVFESMKHFYEFGLSEGRDITF----DSYLY 404
+ A + L G D+ EG D +Y
Sbjct: 973 GIGDDTVNGNAGDDTLRGDQEDPTLPGGNDLVLGGAGRDFMRGGEGDDTILGQDNSDVIY 1032
Query: 405 LGSYDDLRNVFGSDRGAAAR---HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
D + D ++ G ++ ++ LI
Sbjct: 1033 GDRGSDSISGDQGDDILVGDTGISSLSGGNDTITGGVGNDSIFGEKGNDSLIGEQGQDSI 1092
Query: 462 LVQVGKDH----------FSNFGCEEGRFVTFDSYLYLGSYDDLR 496
D F + G + R D L G+ DL
Sbjct: 1093 FGGDNDDVIFGREDNDLMFGDAGNDTIRAGIGDDTLAGGAGGDLL 1137
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 65/220 (29%), Gaps = 8/220 (3%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
DV G +I +I + G+ + G ND
Sbjct: 278 GSSGEDVIDGLEGNDSIFGLAGNDQIQGSEGIDFLFGNTDNDTLEGGTG---NDQIYGGK 334
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI 222
S + D D FG + +YG + +
Sbjct: 335 QSDRLVGDDGDDGLFGNLGEDTLLGGQGRDVMYGGQANDSLRGGLD-DDLVLGDKDNDVV 393
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ G+D ++ GG + + S+ G N TI T ++ +G GND + G
Sbjct: 394 WGDEGND----SVYGGSGEDLIFGNDGADSLLGDNGNDTIFAGTGSDTALGGEGNDQISG 449
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++ F G D G +G DTF + I
Sbjct: 450 ELGSDFLFGGEGADTLAGGTGSDTFAIAEGTGGQSIEEAN 489
>gi|20141616|sp|Q9WTR0|MMP16_MOUSE RecName: Full=Matrix metalloproteinase-16; Short=MMP-16; AltName:
Full=Membrane-type matrix metalloproteinase 3;
Short=MT-MMP 3; Short=MTMMP3; AltName:
Full=Membrane-type-3 matrix metalloproteinase;
Short=MT3-MMP; Short=MT3MMP; Flags: Precursor
gi|10444090|gb|AAG17704.1|AF282844_1 matrix metalloproteinase 16 [Mus musculus]
Length = 607
Score = 77.9 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 58/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P + R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRRAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDRSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|21242932|ref|NP_642514.1| hemolysin-type calcium-binding protein [Xanthomonas axonopodis pv.
citri str. 306]
gi|21108432|gb|AAM37050.1| hemolysin-type calcium binding protein [Xanthomonas axonopodis pv.
citri str. 306]
Length = 2183
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 3/154 (1%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G+S ND + G + N+ +G D G +G DT+ NA
Sbjct: 1935 TITGTSRNDTLTGTTGNDTIDGLAGADTMTGLAGDDTYIVDNTGDKAV--EAANAGTDTV 1992
Query: 330 ANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ ++VE L A I+ + + L A L G D +
Sbjct: 1993 MSSVSFTLGANVENLVLAGSGAINGTGNELNNRLTGNAGANVLTGGAGADYLDGGAGTDT 2052
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
G D + + Y + + A
Sbjct: 2053 LAGGLGNDTYWLARGYGTDTVQENDTTSGNLDIA 2086
Score = 58.3 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 57/407 (14%), Positives = 105/407 (25%), Gaps = 105/407 (25%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
I G + I + V +G+D + G+ N+ +GND D G DTFFY
Sbjct: 376 DLITGRDGADRIYAGAGDDVVTAGAGDDQIWGDLGNDTIDAGAGNDTVDSGQGRDTFFYS 435
Query: 311 APSYLY-------------------------------------KIYRFENAIIV---YDA 330
+ ++ ++ + V + +
Sbjct: 436 RGDGVDRYSAGMAAPADGDVIRFKEGLAQSDLMFSRVEDDLLVRVIGTQDRLTVKAAFTS 495
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQR-------------SILEYTASYEDLIQVIGQ 377
+ D + FAD + + ++ A + + +G
Sbjct: 496 QPLSRIEFGDGRAVAFADLALTPGQAQATAGNDSEIHLLPTGDTVDALAGSDTVYGGVGN 555
Query: 378 DVFESMKHFYEFGLSEGRDITFD--------------------SYLYLGSYDDLRNVFGS 417
D + + G D D + + G+ DD+ V G+
Sbjct: 556 DTIDGGEGADMLYGGAGDDALTDARGDNTFDAGDGNDRITGMGTSVDAGAGDDVVEVPGA 615
Query: 418 DRGAAARH-----------YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ +G+ + A+ +
Sbjct: 616 RVKLGTGSDTLVVRRSAGPVGATLLVDGQTQNGSGRTVRFAAGLTPAQVGISSVPGEGGR 675
Query: 467 KD------HFSNFGCEEGRFVTF---------------DSYLYLGSYDDLRNVFGSDRGA 505
KD N G +E R + F D+ L S+ D+ N S
Sbjct: 676 KDLLVTWAGEGNAGTQELRILGFMDFAEGQRGLRFVFDDAPQTLWSWGDVFNRANSGTPG 735
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
T G E R ++ +A ++ L G D
Sbjct: 736 DDALRGTPGDDELRGLAGNDTIDGLAGNDMLDGGAGADTLRGGDGND 782
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 4/119 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ GDD L V L ++ G N T+ ++++G G D +
Sbjct: 33 LAGGEGDDWLAGEDEHAVDAVSTLT--GNDTLDGGVGNDTLVGGNGNDALMGGEGRDTLY 90
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G + ++ +G D+ DG G DT+ A ++ DA LS
Sbjct: 91 GGAGHDTLIGGAGADLLDGGLGNDTYVIDAADLPEGSSDAA--ELLRDAGGDDTVMLSG 147
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 49/147 (33%), Gaps = 12/147 (8%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS------ 251
G T+ GDD + G K N + +
Sbjct: 1942 NDTLTGTT---GNDTIDGLAGADTMTGLAGDDTYIVDN-TGDKAVEAANAGTDTVMSSVS 1997
Query: 252 -SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++G +N+ +A I + G+ N+ + GN+ NV +G D DG +G DT
Sbjct: 1998 FTLGANVENLVLAGSGAI-NGTGNELNNRLTGNAGANVLTGGAGADYLDGGAGTDTLAGG 2056
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDF 337
+ Y + R V + + +
Sbjct: 2057 LGNDTYWLARGYGTDTVQENDTTSGNL 2083
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/258 (13%), Positives = 68/258 (26%), Gaps = 14/258 (5%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYG----IGKGTILSHNALHEIGHALGL 134
+ D DV G G T+ + +L
Sbjct: 753 GNDTIDGLAGNDMLDGGAGADTLRGGDGNDVLIAGEGGAAGSDTLYGDAGDDILVASLTG 812
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
S G + + + + + + G + + D AV +
Sbjct: 813 PSQLSGGAGGDTFRIGPSGGLHTIVRDDAEARDVLEFDAAITPGQVSVAHM-DGAAVLSV 871
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
P G+L + + P G D + + ++ + +
Sbjct: 872 RDVPTGALKTTVVLSGLFSSGQPGGVAQVRFAG-DPATVWTLQDLQRQALVGGAGHDRLT 930
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + +VG +G+DV+ G N+V +G D G +G D +
Sbjct: 931 G--------FDFSDDRLVGGAGDDVLSGRGGNDVLSGGAGFDTLAGGAGDDAYLVGRGDG 982
Query: 315 LYKIYRFENAIIVYDANE 332
I + + +
Sbjct: 983 RDVITEAGGSDTLRFGAD 1000
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 62/493 (12%), Positives = 113/493 (22%), Gaps = 72/493 (14%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ D G G + + A G + G +
Sbjct: 544 AGSDTVYGGVGNDTIDGGEGADMLYGGAGDDALTDARG-DNTFDAGDGNDRITGMGTSVD 602
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
V+ + + S + A + G + G +
Sbjct: 603 AGAGDDVVEVPGARVKLGTGSDTLVVRRSAGPVGATLLVDGQTQNGSGRTVRFAAGLTPA 662
Query: 216 SPFIQTIYDSGG-DDLLDLTLIGGVKNYIDLNTESWSSI--------------------G 254
I ++ GG DLL G +L +
Sbjct: 663 QVGISSVPGEGGRKDLLVTWAGEGNAGTQELRILGFMDFAEGQRGLRFVFDDAPQTLWSW 722
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + +++ G+ G+D + G + N+ +GND+ DG +G DT
Sbjct: 723 GDVFNRANSGTPGDDALRGTPGDDELRGLAGNDTIDGLAGNDMLDGGAGADTL------- 775
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
D L E L A + L+
Sbjct: 776 ---------------RGGDGNDVLIAGE-----------GGAAGSDTLYGDAGDDILVAS 809
Query: 375 I-GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+ G F +G L + D A +
Sbjct: 810 LTGPSQLSGGAGGDTF--------------RIGPSGGLHTIVRDDAEARDVLEFDAAITP 855
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
G+ A + S D+ ++ G + RF + ++
Sbjct: 856 GQVSVAHMDGAAVLSVRDVPTGALKTTVVLSGLFSSGQPGGVAQVRFAGDPATVWTLQDL 915
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ + G + L ++ L AG D
Sbjct: 916 QRQALVGGAGHDRLTGF-DFSDDRLVGGAGDDVLSGRGGNDVLSGGAGFDTLAGGAGDDA 974
Query: 554 FSNFGYEEGRSIT 566
+ G +GR +
Sbjct: 975 YL-VGRGDGRDVI 986
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 48/144 (33%), Gaps = 16/144 (11%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ T+ + G+D +D +T + G YI NT + T+
Sbjct: 1933 SSTITGTSRNDTLTGTTGNDTIDGLAGADTMTGLAGDDTYIVDNTGDKAVEAANAGTDTV 1992
Query: 263 AQ------HTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+E++V SG GN NN ++G +V G +G D + +
Sbjct: 1993 MSSVSFTLGANVENLVLAGSGAINGTGNELNNRLTGNAGANVLTGGAGAD--YLDGGAGT 2050
Query: 316 YKIYRFENAIIVYDANEHKQDFLS 339
+ + A + D +
Sbjct: 2051 DTLAGGLGNDTYWLARGYGTDTVQ 2074
Score = 40.9 bits (94), Expect = 0.64, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 12/66 (18%)
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
L+ + L V L + L G D
Sbjct: 51 DAVSTLTGNDTLDGGVGNDTLVGGNGNDALMGGEGRDTLYGGAGHDTLIGGAGADLLDGG 110
Query: 393 EGRDIT 398
G D
Sbjct: 111 LGNDTY 116
>gi|294788141|ref|ZP_06753384.1| type I secretion target repeat protein [Simonsiella muelleri ATCC
29453]
gi|294483572|gb|EFG31256.1| type I secretion target repeat protein [Simonsiella muelleri ATCC
29453]
Length = 925
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/350 (12%), Positives = 91/350 (26%), Gaps = 33/350 (9%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ D G+G + + G +G +YG
Sbjct: 421 GNDFLYGEEGNDTLIGGLGDDFLSGGTGADILIGNEGSDILSGDDGDDKLYGQLGSDSLF 480
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
+ A+ + T D G G++ +
Sbjct: 481 GGKGHDLLVGDDDS----ATAHFDDTLNGGDDNDELIGNGGNDTLYGDDGDDTLFGDGAN 536
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ G D L + G + + + ++++G G
Sbjct: 537 DGTRNNPLISGKDTLY-------------GGNGNDYLDGGRDDDALYGGSGKDTLIGGMG 583
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY---------LYKIYRFENAIIV 327
ND + GN ++ + + G+D+ G +G D A ++ ++
Sbjct: 584 NDSLYGNEEDDELYGNEGDDIIFGGTGNDVIHGDADEALITDWNQSFNDTLHGNAGDDVM 643
Query: 328 YDAN-------EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + D L D + ++ + L + L +G+D+
Sbjct: 644 VGGSGNNIMYGDDGNDRLWGGMSELNGDNTFVTPHIIGNNTLYGGNGDDYLFGNVGKDML 703
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+G D F + N + + + +Y HG
Sbjct: 704 YGDDGSDNLYGMDGDDQLFGGAGVDYLHGGKGNDYLNGGLDSDYYYYHHG 753
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/314 (11%), Positives = 73/314 (23%), Gaps = 19/314 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGD-----DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ I+ G+ + +D+ + I N GG +
Sbjct: 297 GGNDRIHGGLDDDVIWGDAGNAAPQDNGIDVLFGDDGNDRIYGNGNDDILDGGDGDDKLY 356
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP---------- 312
V GND + G + + G+D+ G G D + +
Sbjct: 357 GDELVKGLDAKYHGNDTLYGRAGKDQLVGQGGDDILYGGMGDDILWGDSNQFSNENITTE 416
Query: 313 ---SYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+Y E + + + + L + L
Sbjct: 417 PELIGNDFLYGEEGNDTLIGGLGDDFLSGGTGADILIGNEGSDILSGDDGDDKLYGQLGS 476
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L G D+ + + D+ +G+ +
Sbjct: 477 DSLFGGKGHDLLVGDDDSATAHFDDTLNGGDDNDELIGNGGNDTLYGDDGDDTLFGDGAN 536
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G + L ++ L D GKD + + +
Sbjct: 537 DGTRNNPLISGKDTLYGGNGNDYLDGGRDDDALYGGSGKDTLIGGMGNDSLYGNEEDDEL 596
Query: 489 LGSYDDLRNVFGSD 502
G+ D G+
Sbjct: 597 YGNEGDDIIFGGTG 610
Score = 40.9 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 49/331 (14%), Positives = 97/331 (29%), Gaps = 31/331 (9%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVI-ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
N ++ I + N +I + +++ G GNDV+ G +++ F G D G G
Sbjct: 127 NEADFNDIIQSDNNDSIIKGLGGHDALSGGQGNDVIEGGDGSDMLFGGGGQDKIRGGDGN 186
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHK-----QDFLSDVERLRFADQCIDSVNVKQR 359
D + + I + + L V + +++ I S K
Sbjct: 187 DFISSSYHLVVNNRISSNDRWISNLGQHDEVLSVMTNTLWGVYKTE-SNEIIFSGGKKVN 245
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL--YLGSYDDLRNVFGS 417
+ + ++++ G D H ++ +G ++ D Y D L G+
Sbjct: 246 DV-----AGDEIMGGNGDDTIFGSNH-DDYIHGDGYHLSEDGLNIVYETGKDLLIGKGGN 299
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
DR G ++ + + + + D + G D +E
Sbjct: 300 DRIHGGLDDDVIWGDAGNAAPQDNGIDVLFGDDGNDRIYGNGNDDILDGGDGDDKLYGDE 359
Query: 478 ------GRFVTFDSYLYLGSYDDLRNVFGSDRGAA----------ARHYITHGVKEGRNP 521
++ D+ D L G D + + +
Sbjct: 360 LVKGLDAKYHGNDTLYGRAGKDQLVGQGGDDILYGGMGDDILWGDSNQFSNENITTEPEL 419
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L ++ LI D G D
Sbjct: 420 IGNDFLYGEEGNDTLIGGLGDDFLSGGTGAD 450
>gi|317152618|ref|YP_004120666.1| outer membrane adhesin like proteiin [Desulfovibrio aespoeensis
Aspo-2]
gi|316942869|gb|ADU61920.1| outer membrane adhesin like proteiin [Desulfovibrio aespoeensis
Aspo-2]
Length = 3450
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 63/215 (29%), Gaps = 42/215 (19%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+Y G+D LD GG N L + G N ++
Sbjct: 3195 GNDTLYGGDANDILYGGSGNDSLDGGNADDMISGGSGNDTLLGGNGNDVLVGGAGNDSMD 3254
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T ++++G GND ++G+ +++ +G+D DG +G DT F
Sbjct: 3255 GGTGNDTLLGGDGNDTLLGDHGDDLLSGGAGDDSLDGGTGHDTLF--------------- 3299
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
D L +L A + + G D+ +
Sbjct: 3300 -------GGDGNDTLVGDH---------------GNDLLVGGAGDDLIYGGTGNDMVIAG 3337
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ + L G D F L V +
Sbjct: 3338 TGYDQVELGSGNDTIFIDQSVLADGGGEMIVSDFN 3372
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 66/283 (23%), Gaps = 42/283 (14%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + +++ F + G L D +++ N D + S + +
Sbjct: 3110 DDAQFNPNGEEATFKYSWGGQPGMTLSDYQSVTVSIDDQTSNVDDDDFNDLSVKLAFTND 3169
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + G G+D + G + N+ + ND+ G SG D+
Sbjct: 3170 GVFQGGSGDDLAYGGLGSDTLHGGAGNDTLYGGDANDILYGGSGNDS------------- 3216
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
L + L + L+ G D
Sbjct: 3217 ------------------------LDGGNADDMISGGSGNDTLLGGNGNDVLVGGAGNDS 3252
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ +G D + + + G
Sbjct: 3253 MDGGTGNDTLLGGDGNDTLLGDHGDDLLSGGAGDDSLDGGTGHDTLFGGDGNDTLVGDHG 3312
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
L A + + + + G D + F+
Sbjct: 3313 NDLLVGGAGDDLIYGGTGNDMVIAGTGYDQVELGSGNDTIFID 3355
>gi|254465770|ref|ZP_05079181.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
Y4I]
gi|206686678|gb|EDZ47160.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
Y4I]
Length = 833
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/223 (13%), Positives = 64/223 (28%), Gaps = 14/223 (6%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+Q G +L ++ + V T+ G+D++ G N +
Sbjct: 246 LQTRDGLAGFTLSGDVIEDAVVTPIEQGNDTVLAGDGNDVV----YGQGGNDVLYGEAGN 301
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S+ G + + + ++++G G D + G ++ +GND G DT
Sbjct: 302 DSMEGGDGDDVLDGGAGADTLIGGDGGDTLSGGDGDDYIEGGAGNDSLTTGLGNDTLI-- 359
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + + D + +
Sbjct: 360 GGEGDDTLRNSAGDDSLVGG--------VGNDSIIATDGNDTLEGGDGNDTMYGGNDNDL 411
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
L+ G D+ F +S+G G+ D N
Sbjct: 412 LVGGAGDDLMYGEADADTFKMSDGFGNDTLEGGEAGNDYDTLN 454
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/242 (17%), Positives = 80/242 (33%), Gaps = 35/242 (14%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I G+D L TLIGG + N+ S+ G N +I
Sbjct: 327 GGDTLSGGDGDDYIEGGAGNDSLTTGLGNDTLIGGEGDDTLRNSAGDDSLVGGVGNDSII 386
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++ G GND + G + N++ +G+D+ G + DTF + E
Sbjct: 387 ATDGNDTLEGGDGNDTMYGGNDNDLLVGGAGDDLMYGEADADTFKMSDGFGNDTLEGGEA 446
Query: 324 A------------------------IIVYDANEHKQDFLSDVERLRFADQC--IDSVNVK 357
+ D ++ S++E L DQ +D+
Sbjct: 447 GNDYDTLNLSDVTTGVTVTYTGDEAGTITDGSD--TITFSEIELLNLTDQGDIVDASADS 504
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
++ + + G D+ + + + L+ G D+ DD + F +
Sbjct: 505 AGVTIDAGKGDDTITMGAGDDLITGGEGYDQLILTGGGGT--DTVSDFSVGDDDSDGFYN 562
Query: 418 DR 419
D+
Sbjct: 563 DQ 564
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 61/253 (24%), Gaps = 24/253 (9%)
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND------ 152
I D D G G I + LG G + D
Sbjct: 320 DTLIGGDGGDTLSGGDGDDYIEGGAGNDSLTTGLGNDTLIGGEGDDTLRNSAGDDSLVGG 379
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
NDS + + + + D +G ++ +YG +
Sbjct: 380 VGNDSIIATDGNDTLEGGDGNDTMYGGNDNDLLVGGAGDDLMYGEADADT--------FK 431
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV----- 267
D T+ + D + V + + + + + TI +
Sbjct: 432 MSDGFGNDTLEGGEAGNDYDTLNLSDVTTGVTVTYTGDEAGTITDGSDTITFSEIELLNL 491
Query: 268 -----IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
I S + ++ +G+D+ G G D + F
Sbjct: 492 TDQGDIVDASADSAGVTIDAGKGDDTITMGAGDDLITGGEGYDQLILTGGGGTDTVSDFS 551
Query: 323 NAIIVYDANEHKQ 335
D + Q
Sbjct: 552 VGDDDSDGFYNDQ 564
Score = 39.4 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 39/309 (12%), Positives = 81/309 (26%), Gaps = 14/309 (4%)
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+D + +S G + + T +++ +G D V G +++ G+DV G
Sbjct: 2 AILDWVKDLIASKTGTADDDLMDGTTGDDTIDAGAGQDTVAGEEGSDIIDAGEGDDVVYG 61
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
G F + N V + + + ++
Sbjct: 62 DMGD--GFEQGADASPLVLDINNIQTV---SHDGYTGSAGDYAIFSDIAVLEDGTSVWGR 116
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
++ S + + G D + G S G TF + + + + +
Sbjct: 117 LVLVEKSNDYMSVQFGYD---AGAEILLNGDSPGDRATFRLEFFDPATGEPVYLNSTATF 173
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
T+G E D + + + D + G + +
Sbjct: 174 NDVDDNSTYGDAEAVIIDGNSFTSFGVAENTSLGTAIDGSMVTATGSEMNDYTDQDAWFS 233
Query: 481 VTFDS---YLYLGSYDDLRNVF---GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
F+ + D F G A I G D + ++
Sbjct: 234 AAFEDRSSIEFTLQTRDGLAGFTLSGDVIEDAVVTPIEQGNDTVLAGDGNDVVYGQGGND 293
Query: 535 DLINAFADA 543
L +
Sbjct: 294 VLYGEAGND 302
>gi|268679619|ref|YP_003304050.1| Hemolysin-type calcium binding domain protein [Sulfurospirillum
deleyianum DSM 6946]
gi|268617650|gb|ACZ12015.1| Hemolysin-type calcium binding domain protein [Sulfurospirillum
deleyianum DSM 6946]
Length = 4798
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 62/395 (15%), Positives = 111/395 (28%), Gaps = 16/395 (4%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV--YGVD 150
Y F++ N++ A V+ G+ T + + I + G G+
Sbjct: 364 NYSRTVFVDTNYEYAPVYGKTYGQLTFYGSDKDNIITAKSRADNYVEGGLGSDTITTGMG 423
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
ND + +S + + + + IY S + Y E
Sbjct: 424 NDTIYTNINLDGNKVDNETESTTNTVYAGDGSDTIYGSAGKDVIYADSDSSSDPSEYSEE 483
Query: 211 VQQKDSPFIQTIYDSGGDDLLD---LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ TIY G DD L T + I G + N TI
Sbjct: 484 DYVEGRGGSDTIYGGGNDDTLYANSATSHADTSGDYIVGGLGKDKIYGSDGNDTIYGDEK 543
Query: 268 IESVVGSSG---NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
SS +D + ++V + + +D+ +G +G D Y +
Sbjct: 544 ANQGNNSSLFSDSDTIKAYGGDDVVYGGNDSDIIEGGAGND-IVYGGDDDDVLFAGNKMF 602
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D H D ++ L D L+ + L G D +
Sbjct: 603 AMDADDGTHIDDGTTN--YLSGEDGNDKLHGGSGNDTLDGGNDDDTLWGGSGDDTLIGGE 660
Query: 385 HFYEFGLSEGRDITFDSYLYL----GSYDDLRNVFGSDRGAAARHYITHG-VKEGRNPDA 439
G+D Y G+ D + + GS R + + ++ G +
Sbjct: 661 GDDSLYGGIGQDTLMGGDDYDTYLAGNGDTISDSDGSGRVSFEGNMLSGGTFNKDTGTYE 720
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
Y S L ++ + G
Sbjct: 721 GDGGSYSLSGGTLTFTNGVGTIIIDNYSKSADSLG 755
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 62/441 (14%), Positives = 122/441 (27%), Gaps = 36/441 (8%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T D+ AD + G G T + + G P Y
Sbjct: 1689 ADTIYADAGNDTITGGLGADNLQGGAGNDTYVFNRGD-------GSDTITDDYRYAPYYW 1741
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT--------------PMVSDIVAVQKI 194
N + +S+ + + +SD + ++
Sbjct: 1742 NTNYTIQGNGGNDTLSFGEGITTDDIIVKASATSNDLIVALKEEGKSFDELSDKIVLKDW 1801
Query: 195 YGAPK-----GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ + D D+TL + + +
Sbjct: 1802 FNTNNRIENLTFSDGTTLSTNDIVNLQGTVDADTVHLLDSTSDITLSMQEGDDVVQTSGG 1861
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+I G + TI ++++G+ GNDV+ G + N+V G D G +G DT+ +
Sbjct: 1862 SDTIDGGLGDDTINSGAGNDTLLGNEGNDVLYGEAGNDVLNGGKGADNLQGGAGNDTYIF 1921
Query: 310 YAPSYLYKIYRFENAI------IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
IY + D LS E + AD + + I+
Sbjct: 1922 KRGDGSDTIYDDSRYTPYYWYPSYVIQQDGGNDTLSFGEGITSADIIVKASANSNDLIVA 1981
Query: 364 YTASYEDLIQVIG----QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+ ++ +D F + F S+G ++ + + L +D V D
Sbjct: 1982 LKEEGKSFSELTDKIVLKDWFSTNNRVESFTFSDGTTLSTNDIVNLQGTEDADTVHLMDT 2041
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ + G + ++ ++ L + L G D ++
Sbjct: 2042 TSDVTISMQGGDDVVQTSGGNDIIDGGLGNDTLKGGAGNDTLLGAEGNDVLYGEKGDDVL 2101
Query: 480 FVTFDSYLYLGSYDDLRNVFG 500
LG+ + G
Sbjct: 2102 LGGVGDDTLLGAEGNDILEGG 2122
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 52/309 (16%), Positives = 92/309 (29%), Gaps = 17/309 (5%)
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLD 232
GY A +V+ Y G G++I I G D L
Sbjct: 4390 YGGYIAFDSKDHLVSGDDNYNWLIGHAGDDILLGSGGNDYISGGKENDLIVGGNGADNL- 4448
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
G + I I + N T+ T + + G +G+D + G S N+ +
Sbjct: 4449 ---QGNNGDDIIYGDNGNDQIYAGDGNDTLIGGTGADILFGENGDDTISGGSGNDTLYAG 4505
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+GND G +G D S Y + + D + + SD + + F +
Sbjct: 4506 NGNDTLSGGTGDDQINGSYGSDTYLFNIGDGNDTIVDTSVYGS---SDTDTIIFGEGITK 4562
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
R + D+ V + F S ++ E +TF+ LG+ D
Sbjct: 4563 ENLQILRDSYDLVFKVNDIDSVRIKYWFSSTQNTLE-------QVTFNDGTTLGTSDINA 4615
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ + + + Y +D ++ + L
Sbjct: 4616 LAMTQGTSNSDWLFGIDALGDNIYGMGGNDRIYSYGGDDFLSGGSGNDFLEGGSGSDTYF 4675
Query: 473 FGCEEGRFV 481
F +G
Sbjct: 4676 FNQGDGNDT 4684
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 57/221 (25%), Gaps = 50/221 (22%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D D+TL G+ N + ++ G + N T+ + + G G D + G + N+
Sbjct: 1499 DSTSDVTLSLGLGNDVAQTLGGNDTVDGGDGNDTLKGGAGNDLLKGGVGADALYGEAGND 1558
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE----------HKQDF 337
S ND+ G G DT+ + I ++ + D
Sbjct: 1559 TLEGGSDNDMLQGGEGNDTYIFGKGDGKDTIIDTSGENVLSFGTGIIASDLVFKKNGNDL 1618
Query: 338 LS--------------------------DVERLRFADQC--------------IDSVNVK 357
+ ++ FAD
Sbjct: 1619 IVALQEEGKSFDELSDVVTLQNWYSQSGSIKTFLFADGTSYNEEDIYTQMLQEGLVYGTV 1678
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++ T + + + G D G D
Sbjct: 1679 NNDTIKGTDNADTIYADAGNDTITGGLGADNLQGGAGNDTY 1719
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 49/172 (28%), Gaps = 10/172 (5%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-- 308
I + IA + V G + +IG++ +++ S GND G D
Sbjct: 4383 DVINEIKYGGYIAFDSKDHLVSGDDNYNWLIGHAGDDILLGSGGNDYISGGKENDLIVGG 4442
Query: 309 -----YYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSIL 362
+ IY +Y + + + + L + L
Sbjct: 4443 NGADNLQGNNGDDIIYGDNGNDQIYAGDGNDTLIGGTGADILFGENGDDTISGGSGNDTL 4502
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLR 412
+ L G D F + +G D D+ +Y S D
Sbjct: 4503 YAGNGNDTLSGGTGDDQINGSYGSDTYLFNIGDGNDTIVDTSVYGSSDTDTI 4554
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/252 (15%), Positives = 75/252 (29%), Gaps = 13/252 (5%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S + D G ++ + LG + YG D
Sbjct: 3725 GGSGTDEIYGREDDDTLLGNAGDDILVGEAGNDVLNGGLG------NDTYGFGYGDGADV 3778
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+D S S+ + + + T D +Y A S + + +
Sbjct: 3779 IHDVATESQSSFAFVIGNDGISRWQAVTTEYSVD-AGNDTLYFAAGISSSDLVVSNSGKD 3837
Query: 214 -----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + TI D + + I T + + + I + +
Sbjct: 3838 LIIQLRGATDQVTIKDFYESNT-RIENFTFSDGTILNATAIEALLFTQGNDTVIFKDNLN 3896
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
SV G SG+DV+ ++ N++ SGND +G G D + + I
Sbjct: 3897 HSVSGLSGDDVITTSNGNDILEGGSGNDTLNGGLGDDVYVFGRGDGKDIIAEVGGNEWWQ 3956
Query: 329 DANEHKQDFLSD 340
+ Q L++
Sbjct: 3957 TNGGNDQILLTN 3968
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 57/411 (13%), Positives = 112/411 (27%), Gaps = 49/411 (11%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+ D +L ++ ++ T ++ G + + I + + G+ GND++
Sbjct: 3230 SFSDGTTMELDEIFSAIDASGHVFYGTPDVDTMEGSDTSEVIMALESDDVINGNGGNDLL 3289
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-- 338
G N+ +G+D+ G G DT+ S I+ + A D +
Sbjct: 3290 FGQEGNDTLDGGAGDDILYGGEGDDTYIVTPNSGNDTIFDSTGVDRLLFAEGISADDVNV 3349
Query: 339 -------------------------SDVERLRFADQCIDSVN-------VKQRSILEYTA 366
+ +E F+D VN
Sbjct: 3350 YFEGNDLYVEIEGTTLKLQDWYKADNRIESFSFSDGTTLGVNDILAFMVSDGDDYARTLE 3409
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
L + G D +G D + D + G+D
Sbjct: 3410 EGGTLETLEGNDALVGGSGNDTLMGGKGDDYY---DISFKGNDIALDSSGNDTLYFDASI 3466
Query: 427 ----ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG---- 478
+ ++G + + ++ + L + + + + + +
Sbjct: 3467 SPTNLKLTWQQGTHDLILSSDQFPDASVTLQGWYDEGNRIESFEFYDGTVWSVADIIDHL 3526
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
D Y L D++ N G D + AL+ + L
Sbjct: 3527 GTQNDDVYNGLEGVDNIINARGGDDIISTYESNDTLN----GGTGSDALDAGGGDDVLNG 3582
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSA 589
D L AG D + G +I + + VFG+ A
Sbjct: 3583 EEGDDLLLGGAGNDTYLFNGNFGHDTIIDEANDHSDGGSADKIVFGTGIDA 3633
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/412 (11%), Positives = 111/412 (26%), Gaps = 79/412 (19%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + + D+ G G T L GH +
Sbjct: 3554 STYESNDTLNGGTGSDALDAGGGDDVLNGEEGDDLLLGGAGNDTYLF---NGNFGHDTII 3610
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
++ G + D+ +Y + + G +S+ + +
Sbjct: 3611 DEANDHSDGGSADKIVFGTGIDASNLVFKTYLNDTNLYIGIKEGDTPFEALSNTITLTNW 3670
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
Y + + I + + + T+ + +++ GG I + T +
Sbjct: 3671 Y--DEANRIETISFGDGTEASIQELLTMALTNNGEIIKAYEEGG----ILVGTPQSDYLV 3724
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF-----DGSS------- 302
G I ++++G++G+D+++G + N+V GND + DG+
Sbjct: 3725 GGSGTDEIYGREDDDTLLGNAGDDILVGEAGNDVLNGGLGNDTYGFGYGDGADVIHDVAT 3784
Query: 303 -----------------------------GLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G DT ++ A + + +
Sbjct: 3785 ESQSSFAFVIGNDGISRWQAVTTEYSVDAGNDTLYFAAGISSSDLVVSNSGKDLIIQLRG 3844
Query: 334 KQDFLS---------DVERLRFADQCIDSVNVKQRSIL-----------------EYTAS 367
D ++ +E F+D I + + + +
Sbjct: 3845 ATDQVTIKDFYESNTRIENFTFSDGTILNATAIEALLFTQGNDTVIFKDNLNHSVSGLSG 3904
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+ + G D+ E G D+ G D+ G +
Sbjct: 3905 DDVITTSNGNDILEGGSGNDTLNGGLGDDVY---VFGRGDGKDIIAEVGGNE 3953
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 59/442 (13%), Positives = 102/442 (23%), Gaps = 92/442 (20%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
GN I E + I D G D+ + I I YE N
Sbjct: 3500 YDEGNRIESFEFYDGTVWSVADIIDHLGTQNDDVYNGLEGVDNIINARGGDDIISTYESN 3559
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF-------------------DG 300
T+ T +++ G+DV+ G +++ +GND + DG
Sbjct: 3560 DTLNGGTGSDALDAGGGDDVLNGEEGDDLLLGGAGNDTYLFNGNFGHDTIIDEANDHSDG 3619
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF-----------------LSDVER 343
S F +++ + D + +E
Sbjct: 3620 GSADKIVFGTGIDASNLVFKTYLNDTNLYIGIKEGDTPFEALSNTITLTNWYDEANRIET 3679
Query: 344 LRFADQCIDSV----------------------------------NVKQRSILEYTASYE 369
+ F D S+ + +
Sbjct: 3680 ISFGDGTEASIQELLTMALTNNGEIIKAYEEGGILVGTPQSDYLVGGSGTDEIYGREDDD 3739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDLRN--------VFGSDRG 420
L+ G D+ G D F D+ V G+D
Sbjct: 3740 TLLGNAGDDILVGEAGNDVLNGGLGNDTYGFGYGDGADVIHDVATESQSSFAFVIGNDGI 3799
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD------------APDLVQVGKD 468
+ + T + N + A +S + N+ D
Sbjct: 3800 SRWQAVTTEYSVDAGNDTLYFAAGISSSDLVVSNSGKDLIIQLRGATDQVTIKDFYESNT 3859
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
NF +G + + L V D G + LE
Sbjct: 3860 RIENFTFSDGTILNATAIEALLFTQGNDTVIFKD-NLNHSVSGLSGDDVITTSNGNDILE 3918
Query: 529 YIASHEDLINAFADAPDLVQAG 550
+ ++ L D + G
Sbjct: 3919 GGSGNDTLNGGLGDDVYVFGRG 3940
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 43/325 (13%), Positives = 83/325 (25%), Gaps = 32/325 (9%)
Query: 270 SVVGSSGNDVVIGNS-ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ GS ++++ S A+N G+D G DT + K+ +
Sbjct: 389 TFYGSDKDNIITAKSRADNYVEGGLGSDTITTGMGNDTIYTNINLDGNKVDNETESTTNT 448
Query: 329 DANEHKQDFLSDVE----RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF---E 381
D + +D D + +E + + D
Sbjct: 449 VYAGDGSDTIYGSAGKDVIYADSDSSSDPSEYSEEDYVEGRGGSDTIYGGGNDDTLYANS 508
Query: 382 SMKHFYEFG----LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
+ H G G+D + S Y D + G++ +
Sbjct: 509 ATSHADTSGDYIVGGLGKDKIYGSDGNDTIYGDEKANQGNNSSLFSDSDTIKAYGGDDVV 568
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ I + D V + ++G + + YL
Sbjct: 569 YGGNDSDIIEGGAGNDIVYGGDDDDVLFAGNKMFAMDADDGTHIDDGTTNYL-------- 620
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
S + + G + L + + LI D G+D +
Sbjct: 621 ---SGEDGNDKLHGGSGNDTLDGGNDDDTLWGGSGDDTLIGGEGDDSLYGGIGQD--TLM 675
Query: 558 GYEEGRSITFNPDLYLTSYDDLWNV 582
G + + D YL D +
Sbjct: 676 GGD-------DYDTYLAGNGDTISD 693
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/380 (11%), Positives = 102/380 (26%), Gaps = 32/380 (8%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + ++T + G + L V Y D+ S S + I
Sbjct: 1162 DTLEGFNDTLLLDTTLKTALSTNGINYSINALGEVVGTYGDVQEGS-SGNDTISGSGYIY 1220
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF--------------Y 309
+++ GSSG DV+ G + ++V + NDV G G D
Sbjct: 1221 GGEGNDTLYGSSGKDVIDGGAGDDVIYGRDNNDVLRGGDGNDYIVAGSSTSDSNYGHDIL 1280
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ D + D + + + + T+ +
Sbjct: 1281 EGGKGNDTLIGTARNSTYVYNYGDGYDTIIDSGNIGATTDVLSLRGIVLSDLNFRTSGND 1340
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEG----------------RDITFDSYLYLGSYDDLRN 413
+I ++ + + G + + + +
Sbjct: 1341 VIIDILDVNDATVVNGSITIKNGVGSGAIETLQLEEGTYNLNGLLNTQVIDGQRVYKVED 1400
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
FGS ++ + + + D ++ + K +N+
Sbjct: 1401 NFGSLTLSSLNNIGLVFGEGISSDDIIVQASSSNNNLVIALKEEGKSFSELSNKLTLTNW 1460
Query: 474 GCEEGRFVTFD-SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
+ R TF + + S +D+ N+ G++ + + +
Sbjct: 1461 FSDASRIDTFTFNDGTVLSANDVVNLQGTENADTVHLLDSTSDVTLSLGLGNDVAQTLGG 1520
Query: 533 HEDLINAFADAPDLVQAGKD 552
++ + + AG D
Sbjct: 1521 NDTVDGGDGNDTLKGGAGND 1540
Score = 42.9 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 29/228 (12%), Positives = 53/228 (23%), Gaps = 71/228 (31%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV--- 327
++GSS +++V+G N SG+D+ G D + + +
Sbjct: 3120 LLGSSESEMVVGTEGENTLEGRSGDDIVSAGEGDDIYVFGRGDGHDTFMETGGFDTIGFK 3179
Query: 328 ---------------------------------YDANEHKQDFLSDVERLRFADQCID-- 352
A + D +ERL F+D
Sbjct: 3180 EGITKADLILKSSGNNLVISIKEEGKTYDELQDSIAISNWFDESGRIERLSFSDGTTMEL 3239
Query: 353 -------------------------------SVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ ++ ++ + L G D +
Sbjct: 3240 DEIFSAIDASGHVFYGTPDVDTMEGSDTSEVIMALESDDVINGNGGNDLLFGQEGNDTLD 3299
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
EG D + D + + G DR A
Sbjct: 3300 GGAGDDILYGGEGDDTYIVTPNSG--NDTIFDSTGVDRLLFAEGISAD 3345
Score = 42.9 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 32/268 (11%), Positives = 64/268 (23%), Gaps = 18/268 (6%)
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD---FLSDVERLRFADQCIDSVNVKQ 358
S D ++ ++ V + D L + + D
Sbjct: 1479 SANDVVNLQGTENADTVHLLDSTSDVTLSLGLGNDVAQTLGGNDTVDGGDGNDTLKGGAG 1538
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+L+ + L G D E EG D + D + + G +
Sbjct: 1539 NDLLKGGVGADALYGEAGNDTLEGGSDNDMLQGGEGNDTYI--FGKGDGKDTIIDTSGEN 1596
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ I L + + DLI A +
Sbjct: 1597 VLSFGTGIIAS------------DLVFKKNGNDLIVALQEEGKSF-DELSDVVTLQNWYS 1643
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
+ + ++L+ + Y T + D + A ++ +
Sbjct: 1644 QSGSIKTFLFADGTSYNEEDIYTQMLQEGLVYGTVNNDTIKGTDNADTIYADAGNDTITG 1703
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSIT 566
AG D + + +IT
Sbjct: 1704 GLGADNLQGGAGNDTYVFNRGDGSDTIT 1731
Score = 40.9 bits (94), Expect = 0.67, Method: Composition-based stats.
Identities = 32/250 (12%), Positives = 73/250 (29%), Gaps = 9/250 (3%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI--GHALGLMHPGSYNG 142
N ++ + D + +G G G + H+ E A + + G
Sbjct: 3743 GNAGDDILVGEAGNDVLNGGLGNDTYGFGYGDGADVIHDVATESQSSFAFVIGNDGISRW 3802
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
D ND+ + +D V ++ Y + +
Sbjct: 3803 QAVTTEYSVDAGNDTLYFAAGISSSDLVVSNSGKDLIIQLRGATDQVTIKDFYESN-TRI 3861
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
N + + ++ I+ + + G+D + N+ I N +
Sbjct: 3862 ENFTFS-DGTILNATAIEALLFTQGNDTVIFK---DNLNHSVSGLSGDDVITTSNGNDIL 3917
Query: 263 AQHTVIESVVGSSGNDVVIGNSAN--NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ +++ G G+DV + + ++ E GN+ + + G D I
Sbjct: 3918 EGGSGNDTLNGGLGDDVYVFGRGDGKDIIAEVGGNEWWQTNGGNDQILLTNGLTQNDIIV 3977
Query: 321 FENAIIVYDA 330
+ +
Sbjct: 3978 KKVGNDIVLG 3987
Score = 39.4 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 52/429 (12%), Positives = 106/429 (24%), Gaps = 74/429 (17%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ S G + + D + G G T+L + G
Sbjct: 2040 DTTSDVTISMQGGDDVVQTSGGNDIIDGGLGNDTLKGGAGNDTLLGAEGNDVLYGEKG-- 2097
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G E + L M + Q ++ Y +
Sbjct: 2098 --DDVLLGGVGDDTLLGAEGNDILEGGMGSDVLQGGAGTDTYLYSKNSGTD---TIIDTS 2152
Query: 196 GAPKGSLGNNIYKIE-----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G S G I + + + + D L ++ ++ E++
Sbjct: 2153 GNDTLSFGEGIMSDDLIVKASTNSNDLIVALKEEGKSFDELSDKIVLKDWFNVNNRIETF 2212
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGN-DVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S G I I ++ ++ + D + AN+V GND G G D + +
Sbjct: 2213 SFSDG-----AILGAQDITNLQTATADGDYLRYTEANDVIEGKEGNDTLVGGDGDDVYLF 2267
Query: 310 YAPSYLYKIYRFE-NAIIVYDANEHKQDFLS----------------------------- 339
+ I + + D +
Sbjct: 2268 GRGDGIDTIIDIAKDNDSIAFKAGISLDDIVVQVVGTRMIVALKEDGKIFEELSDKLILE 2327
Query: 340 -------DVERLRFADQC-----------IDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+E L F D + N + A ++ G + +
Sbjct: 2328 SVGSNDYGIEWLSFEDGTKIDPRSLILQYNGTENDDTIDLAYLQAINPEVTADTGI-IID 2386
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ + + L +G + ++ G++ A+ + V G + F
Sbjct: 2387 AKEGYDRLILGDGNNTITNAEYITVGN-------GNNEIDASTNLGNIWVSAGEGDNQFA 2439
Query: 442 ALEYIASHE 450
+ S
Sbjct: 2440 VNDLGGSSS 2448
>gi|284799740|ref|ZP_05984739.2| outer membrane secretion protein [Neisseria subflava NJ9703]
gi|284797008|gb|EFC52355.1| outer membrane secretion protein [Neisseria subflava NJ9703]
Length = 421
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 67/238 (28%), Gaps = 21/238 (8%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG + GN I + + + I + D + G I I
Sbjct: 117 YGHEDKNPGNVIRAEDCKDGN-----VIRGTDAKDTI----YGTACEDIIYGGNGTDVIY 167
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N TI +S+ G G D + G + N+ S D+ G G D +F +
Sbjct: 168 AGAGNDTIYGDADGDSLYGEEGKDYLQGGAGNDYLNGGSSADIMRGGDGNDVYFVDNVND 227
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ----------RSILEY 364
Y +A I VE L + + L
Sbjct: 228 QVIEYGNAHAGIDTVRTVIDYTLTDHVENLILQGMQNLNGTGNSLNNNIEGNGGNNHLYG 287
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
A + L+ G D + G D F Y +D +R G+D
Sbjct: 288 LAGDDCLVGKDGNDYLDGGVGNDILIGGTGNDTYFFDKGYG--HDTIREESGNDTLLF 343
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 62/194 (31%), Gaps = 10/194 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
++ + + + ++T+ D D ++ ++ G++ +LN S E N
Sbjct: 223 DNVNDQVIEYGNAHAGIDTVRTVIDYTLTDHVENLILQGMQ---NLNGTGNSLNNNIEGN 279
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ G +G+D ++G N+ GND+ G +G DT+F+ I
Sbjct: 280 GGNNH------LYGLAGDDCLVGKDGNDYLDGGVGNDILIGGTGNDTYFFDKGYGHDTIR 333
Query: 320 RFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ D L + ++ + +
Sbjct: 334 EESGNDTLLFGKGVAASDVLLSKSGANLTVSVGTNDSITIDDWFTGNDHKVENFKFADGS 393
Query: 379 VFESMKHFYEFGLS 392
++ H + LS
Sbjct: 394 TYQVTGHGDYYSLS 407
>gi|62858237|ref|NP_001015992.1| matrix metallopeptidase 16 [Xenopus (Silurana) tropicalis]
gi|89271306|emb|CAJ82988.1| matrix metalloproteinase 16 (membrane-inserted) [Xenopus (Silurana)
tropicalis]
Length = 607
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 60/211 (28%), Gaps = 55/211 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-- 75
L Q W + I Y +T + ++ R A W V LTFEE
Sbjct: 120 LTGQKWHHKHITYSIKNVTPKVG-------DSETRKAIRRAFDVWQNVTPLTFEEVPYCE 172
Query: 76 ------HSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 173 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 232
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 233 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 273
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
F D+ +QKIYG P+ +
Sbjct: 274 --FKLP----TDDLQGIQKIYGPPEKAPAPT 298
>gi|209524104|ref|ZP_03272655.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209495479|gb|EDZ95783.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 474
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/274 (11%), Positives = 81/274 (29%), Gaps = 15/274 (5%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
IYG G+ + + IY G + + G N L
Sbjct: 53 NDVIYGGDGGNNTLSGGAGDDLIYGGQGNDIIYGGEGKNTI----SAGEGNNTLLGGAGD 108
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + + I +++ GN+++ N +++ + GND+ G G DT +
Sbjct: 109 DLVYGGKDDDIIYGGKGSDTIYAGEGNNLLFSNLGDDLVYGGQGNDIIYGGQGDDTIY-- 166
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + ++Y + + + + + ++ +
Sbjct: 167 GGEGNNTLLGDKGNDLIYGGQGNDIIYGGEGKNTISAGEGNNTLLGGAGDDLVYGGKDDD 226
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARH 425
+ G D + + + G D+ + + +Y G DD+ + +
Sbjct: 227 IIYGGKGSDTIYAGEGNNLLFSNLGDDLVYGGQGNDIIYGGQGDDIIHGGEGNNTLL--- 283
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
G + + + ++ +
Sbjct: 284 -GDKGNDLIYGGTGNDTIYGVEGNNTILGGPGNN 316
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/415 (12%), Positives = 98/415 (23%), Gaps = 15/415 (3%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ G + I + GG N T++ + + G GND++ G N G
Sbjct: 39 IGTGGSDLITGGDLNDVIYGGDGGNNTLSGGAGDDLIYGGQGNDIIYGGEGKNTISAGEG 98
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDS 353
N+ G +G D + IY + + +Y + F + + L +
Sbjct: 99 NNTLLGGAGDDLVY--GGKDDDIIYGGKGSDTIYAGEGNNLLFSNLGDDLVYGGQGNDII 156
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ + L+ G D+ + EG++ G+ L
Sbjct: 157 YGGQGDDTIYGGEGNNTLLGDKGNDLIYGGQGNDIIYGGEGKNTI---SAGEGNNTLLGG 213
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
I +G K A + + S+ + + + G
Sbjct: 214 AGDDLVYGGKDDDIIYGGKGSDTIYAGEGNNLLFSNLGDDLVYGGQGNDIIYGGQGDDII 273
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
EG Y N G +
Sbjct: 274 HGGEGNNTLLGDKGNDLIYGGTGNDTIYGVEGNNTILGGPGNNLIFGGKNDDVIHSGKGD 333
Query: 534 EDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF-------NPDLYLTSYDDLWNVFGSD 586
+ + + AGK + G + + + + + D F
Sbjct: 334 NTVYGGQGND--RISAGKGNSLLTGGKGSDTFSLVSGNPDKSFSIQELFGLDTITDFTVG 391
Query: 587 RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYT 641
G + +L ++ LY
Sbjct: 392 EDRIQLDADIFDALGGAGNLADSQFTTIANFDPTNPTNTGGANLVYNSTSGVLYY 446
>gi|326671556|ref|XP_003199461.1| PREDICTED: matrix metalloproteinase-19-like [Danio rerio]
Length = 417
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 66/210 (31%), Gaps = 43/210 (20%)
Query: 26 YFIRYKPDVLTTHRLSFDITELNP-----NAQEVARWALGEWSKVVDLTFEETS-IHSDI 79
F + L++ I P Q R A WS V L+F E +DI
Sbjct: 41 SFKYRRFGYWRKKNLTYRIYNYTPDMGKSATQTAIRTAFKYWSDVTPLSFTEIHFGTADI 100
Query: 80 KFISSNNGYVCTPRYDSRY---------FMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ +P + ++FD+ + W G G+ L A HEIGH
Sbjct: 101 RISFHKRDGCPSPFDGPGHVLAHAEAPPSGIVHFDEDEFWTEGKYYGSNLRIVAAHEIGH 160
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
ALGL H Y + + + DI
Sbjct: 161 ALGLGH--------------------------SQYSSALMAAHYTGYQVNFRLHIDDIRG 194
Query: 191 VQKIYG--APKGSLGNNIYKIEVQQKDSPF 218
+Q IYG + ++IY + +PF
Sbjct: 195 IQAIYGKRVSSTTTADDIYDVTYPTMMAPF 224
>gi|257094275|ref|YP_003167916.1| outer membrane adhesin like protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046799|gb|ACV35987.1| outer membrane adhesin like proteiin [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 5854
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 75/292 (25%), Gaps = 10/292 (3%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G+++Y + GG D L + ++L E S + +
Sbjct: 4008 GDDVYLADELDTVLELAD-----GGTDTLRMV----ALTDVELPAEIESFEALGNAAIDL 4058
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ ++G+ + + G N+ G D G G DT+ + R E
Sbjct: 4059 TGNAADNRLLGTRAANRIEGGDGNDTLDGGGGADTLLGGRGDDTYVVDNAADTIVERRGE 4118
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + VE + + L A L G D +
Sbjct: 4119 GNDTLRSSLSQALTAEVSVENIELTGAANLYAFGDDGNNRLLGNAGNNALRGYAGDDTLD 4178
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
G D+ + + S R +A+ + A
Sbjct: 4179 GGAGADVLQGGTGDDVYVADSVLDRIEEAPGAGSDSVRASASHTLADNVENLTLTGSAAI 4238
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+ L AD G D G + + ++ +Y
Sbjct: 4239 DGTGNSGANRLTGNDADNRLGGGGGDDVLDGGGGNDILDGGAGNDRFVFAYG 4290
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 59/360 (16%), Positives = 104/360 (28%), Gaps = 26/360 (7%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+G D D L G + + + + G E N + + + + G +GND + G
Sbjct: 3050 NGNGDFRDNVLTGDATSRLLVGRAGNDVLAGSEGNDNLDGGSGADQLDGGAGNDALSGGD 3109
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA----IIVYDANEHKQDFLSD 340
++V F +GND+ DG G D A + A D L+
Sbjct: 3110 GDDVLFGGAGNDLLDGGRGADRLDGGAGDDYVNSREAAGGSAAADTIVFAYGSGADTLTA 3169
Query: 341 ------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ +V +L D +++ G + H ++G
Sbjct: 3170 SDSLDVIALAEGVAAASVAVRATGDDLLLSLDGASDTLRLRG--WLRAGDHLTTLRFADG 3227
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
+ + G + D G R +T GV+ G A A + + D +
Sbjct: 3228 SEQDLRERISFGYGSGTPALAAGDVGTTLR--LTEGVRSGDVEVAASANDLVVQLRDSSD 3285
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ + F D + + + V G+D
Sbjct: 3286 SLRLKDWSLASAHVTTLRFS---------DGSTTVLRWPSPKPVIGTDGAETIAAAEASP 3336
Query: 515 VKEG-RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYL 573
+ L A ++ L A + G D G S F+ D L
Sbjct: 3337 YDDRIHGLGGKDTLYGGAGNDSLYGGDAADFLVGDGGAD--LIDGGAGDDSYRFDADDTL 3394
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 55/383 (14%), Positives = 102/383 (26%), Gaps = 43/383 (11%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS--SIGGYEKNMTIAQHTVI 268
DS I GGDD ++ G + +DL + ++ G +
Sbjct: 838 DVVYDSSAADRIATGGGDD--NVYRKRGGDDVVDLGEGNDDFWTLDGTSGRVHAFGGAGR 895
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + SG D V G + + SS +D G + +T A + ++
Sbjct: 896 DYLGAGSGRDTVEGGEGGDFVYGSSDDDQLYGDAQGETADLIAAGADQAASGAQGDLVDA 955
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT---------ASYEDLIQVIGQDV 379
+ + + + + + D V + + +
Sbjct: 956 EDGDDEVFTGAGNDLIAGGDGDDLIVAGGGDDWVWGDWNVWAPIEEPWRDWTVTEKAAPT 1015
Query: 380 FESMKHFY---EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV----- 431
++ E D + D +Y G+ DD+ G D
Sbjct: 1016 STGDTYYSYDLAHIFDESTDGSGDDTIYTGAGDDVAMGEGGDDILILEDGDDRAWGAAGD 1075
Query: 432 -----KEGRNPDAFKALEYIAS-----------------HEDLINAFADAPDLVQVGKDH 469
G++ +A ED++ A +L G+
Sbjct: 1076 DLLLGGAGKDFLVGDTRADLAGADYLDGGDGDDVLFAGAGEDVLLGGAGDDNLWGDGRAG 1135
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
F+ G R V L + +G GA G L+
Sbjct: 1136 FAMHGWTVSRQVARFDNLTRVQTVFEQAAYGVGPGANDLLLGGAGDDWLFGNGGNDLLDG 1195
Query: 530 IASHEDLINAFADAPDLVQAGKD 552
A ++ D + AG D
Sbjct: 1196 GADNDVAFGDDGDDELVGAAGDD 1218
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 64/454 (14%), Positives = 117/454 (25%), Gaps = 30/454 (6%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
G + D+ G + E+ A G + P
Sbjct: 1170 GANDLLLGGAGDDWLFGNGGNDLLDGGADNDVAFGDDGDDELVGAAGDDALSGDDLDDPD 1229
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
+ S+ + + + G + A+ G
Sbjct: 1230 DPDSGLSGSLHGKDSL--DGGDGNDSLWGNGGADTLLGGAGDDALSGDDGKTPA-----P 1282
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
Y T++ +GG+D L L GG + + G + N T
Sbjct: 1283 YHGADFLDGGSGKDTLWGNGGNDTLLGGLDADKLQGGDGADLLDGGTGEDELFGEDGNDT 1342
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G G D++ G++ ++ F +GND G G D A +Y +
Sbjct: 1343 LLGGLDADKLQGGEGGDLLDGSTGDDALFGDAGNDTLIGGPGCDYLVGDAGDDVYLLASG 1402
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
++ +E D + + + F D + L T + + L+ G D
Sbjct: 1403 DSPRDASGLSETLTDSAGN-DTIVFRDASV--------DALRLTQNGDALLIDYGAD--- 1450
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
H + G + G F D +D A G
Sbjct: 1451 --DHLWIVGGAGGAIEQFRFADGTTLTTDELIGRLAD---APVTSDAGGRSVRFGGAGDD 1505
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHF-SNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
L + L + G D + + G R V + +
Sbjct: 1506 LLSALLPGALLAGGRGSDTLIGSSGSDTYRYSVGDGSDRLVDPGPATDAAGVPLVDTLRF 1565
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
A + G R +I +
Sbjct: 1566 GAGITADDLTLGIGSLLIRVGSNPDDAIHIEGFD 1599
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 77/479 (16%), Positives = 135/479 (28%), Gaps = 40/479 (8%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILS--HNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
D+ D G G T H L + + + G + D
Sbjct: 3560 GDAGNDWLEGGAGNDWLSGGDGVDTYHFDGHFGLDTVAGGMVRTSDDAIEFGDGIAPDDV 3619
Query: 152 DYENDSFLTSVMSYFMPQDSM--MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ +S + +P + P +A+ +I A
Sbjct: 3620 SVRLAAGGSSTLLLDVPAVAGRVQVDEGWQPGAPGEGARLALAEIRFADGTR-------- 3671
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + S D L +G V + +I G N +A +
Sbjct: 3672 --WTTAEVAARLLAGSDDGDRL----LGSVVDDRIAGGSGDDTIFGARGNDALAGGEGND 3725
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G GND + G+ ++ GND G +G D S +Y R + ++
Sbjct: 3726 RLDGGEGNDHLQGDGGDDALSGGEGNDHLRGGAGNDVLIGGPGSDVYHFSRGDGHDLI-- 3783
Query: 330 ANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+DV+ L F + V + +L+ A ED + ++ D + +
Sbjct: 3784 --ADSTIQPADVDTLEFGPGIAPFDVLHRVVDGQLLLD-IAGSEDRVTLVAHD--QPLSG 3838
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
S+G I ++ L G+ AA T V G A L
Sbjct: 3839 VKRIRFSDGTVIDPRTWTPSERNVVLAVGSGAQTIPAAARLDTLVVGAGI---AADTLTL 3895
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG--------SYDDLRN 497
+ EDL+ A A ++ + + R + D +
Sbjct: 3896 GRAGEDLLVAAAADSLRLRGWFANPPTQSVLQLRLADGTLWSAAEMSRQAAAMDGGDGDD 3955
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
V + R G D L A ++ L F + G D +
Sbjct: 3956 VLSIAAAWSGRLDGGAGNDRLSGGDGDDELRGGAGNDVLDGGFGADALIGGPGDDVYLA 4014
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 70/279 (25%), Gaps = 27/279 (9%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS--- 302
+ + G + + + + + G + NDV G+ ++ ++G+D G
Sbjct: 1168 GPGANDLLLGGAGDDWLFGNGGNDLLDGGADNDVAFGDDGDDELVGAAGDDALSGDDLDD 1227
Query: 303 -------------GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G D+ ++ A + D +
Sbjct: 1228 PDDPDSGLSGSLHGKDSL--DGGDGNDSLWGNGGADTLLGGAGDDALSGDDGKTPAPYHG 1285
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ L + L+ + D + G D F D
Sbjct: 1286 ADFLDGGSGKDTLWGNGGNDTLLGGLDADKLQGGDGADLLDGGTGEDELFGEDG----ND 1341
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
L +D+ G AL A ++ LI + G D
Sbjct: 1342 TLLGGLDADKLQGGEGGDLLDGSTG-----DDALFGDAGNDTLIGGPGCDYLVGDAGDDV 1396
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ + R + S S + VF A R
Sbjct: 1397 YLLASGDSPRDASGLSETLTDSAGNDTIVFRDASVDALR 1435
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/404 (13%), Positives = 97/404 (24%), Gaps = 46/404 (11%)
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H D S S +D++ D+ +D +A +
Sbjct: 1957 GHDWDDTLAGQAGDDVLDGGEGSDSYFFAS-GDGRDTVSDSGVSGDDVIRFADGIAPGDL 2015
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI--DLNTESWSS 252
A + + V+ I T + ++ ++ DL S
Sbjct: 2016 TLARN----DTDLLLIVRATGERVIVTGWYGDRGPSIEAVEFADGTRWLAADLEALVASP 2071
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + T + + G G+D + G + ++ GND DG G DT+ Y
Sbjct: 2072 TAVGDGADIVVGTTADDLLAGLGGDDELFGQAGDDTLVGGRGNDALDGGEGNDTYIYAPG 2131
Query: 313 SYLYKIYRFENAIIVYDANEHK---------------------------QDFLSDVER-- 343
+I D+ ER
Sbjct: 2132 DGADRIIDTAGGDSDVLEIGAGIAAADLRVTRNAGDLLLVTPDGATLSVADWFLSPERPL 2191
Query: 344 --LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+RF S + L+ G DV + G D
Sbjct: 2192 TAVRFGRGTEWSAAELDVRAATPGDDADYLVGGDGPDVLAGGRGDDTLDGGTGDDTY--- 2248
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA--LEYIASHEDLINAFADA 459
G D D IT + + Y ++ ++
Sbjct: 2249 RFEAGDGGDHIVDRDGDDTLRFGAGITADDVQIVAGETGDVVLQRYGSADSVVLQRGPGV 2308
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
P + +G + D + +Y GSD
Sbjct: 2309 PSEPPRSLPLIEHVEFADGTVWSADD---VENYATRPATTGSDT 2349
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 53/411 (12%), Positives = 103/411 (25%), Gaps = 71/411 (17%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D +G + FD D +G G + A G
Sbjct: 3360 YGGDAADFLVGDGGADLIDGGAG-DDSYRFDADDTLVFGFDSGNDRFFELPSHLEAAPGT 3418
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ +D + ++ ++ A + I+ + +
Sbjct: 3419 -VRFESDVSPSDVVLDLQSLTLTGGRLLVRLKAVPSTLGSFLVTIDAASGLP-IIGTRFV 3476
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ G + + Q+ S T+ + D +D GG + + S+
Sbjct: 3477 FADGTVVEGRDAFARLHHQRTSSASDTLIGTTASDAID----GGAGDDVLFAGGGDDSVS 3532
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G ++ +S+ G +D + G++ N+ +GND G G+DT+ +
Sbjct: 3533 GGPGRDLLSGGPGSDSLFGGGEDDALHGDAGNDWLEGGAGNDWLSGGDGVDTYHFDGHFG 3592
Query: 315 LYKIYRF----------------ENAIIVYDANEHKQDFLSDV----------------- 341
L + + + V A L DV
Sbjct: 3593 LDTVAGGMVRTSDDAIEFGDGIAPDDVSVRLAAGGSSTLLLDVPAVAGRVQVDEGWQPGA 3652
Query: 342 ---------ERLRFADQC------------------IDSVNVKQRSILEYTASYEDLIQV 374
+RFAD + + + + +
Sbjct: 3653 PGEGARLALAEIRFADGTRWTTAEVAARLLAGSDDGDRLLGSVVDDRIAGGSGDDTIFGA 3712
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGA 421
G D + EG D D L G +D +
Sbjct: 3713 RGNDALAGGEGNDRLDGGEGNDHLQGDGGDDALSGGEGNDHLRGGAGNDVL 3763
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 48/308 (15%), Positives = 86/308 (27%), Gaps = 24/308 (7%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+I + + + G +G+D + G+S ++V G D G +G DT A + + Y
Sbjct: 2479 SIYGSSRNDVIDGLAGSDWIEGSSGDDVLDGGVGADRLFGDAGDDTLTGGASAVDDRHYE 2538
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + D L D + + I + + +
Sbjct: 2539 YAYDQYGDGFHVTSHDRLQGG---AGNDTYVIQADSGFDEITDAEGANRIVFGAGLSAEN 2595
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ G E R YL + + + D + + A
Sbjct: 2596 VIVSERNNLGWPETRVDYGPGAFYLAAGTRIDRIESDDGTVVTVTDFAAYYRTVISGSAA 2655
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD-LRNVF 499
+ + D+I + G +E D L+ S DD L +
Sbjct: 2656 ADVITGSRGPDVIAGGDGHDLVHAGA-------GRDEIEGGEGDDLLFGESGDDTLHDDR 2708
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
G + + G D Y+A AG D + G
Sbjct: 2709 GWNHLSG-----------GLGNDNLSGTGYLAGGPGSDTLSGSGMLDGGAGDDWYDIRGA 2757
Query: 560 EEGRSITF 567
G +I F
Sbjct: 2758 --GATIVF 2763
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 78/300 (26%), Gaps = 15/300 (5%)
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
+ SR + +D G + + G
Sbjct: 2476 AAESIYGSSRNDVIDGLAGSDWIEGSSGDDVLDGGVGADRLFGDAGDDTLTGGASAVDDR 2535
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI----VAVQKIYGA-----P 198
+ Y+ V S+ Q + ++ A +I A + ++GA
Sbjct: 2536 HYEYAYDQYGDGFHVTSHDRLQGGAGNDTYVIQADSGFDEITDAEGANRIVFGAGLSAEN 2595
Query: 199 KGSLGNNIYKIEVQQKD-SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
N + D P + D ++ + G V D + I G
Sbjct: 2596 VIVSERNNLGWPETRVDYGPGAFYLAAGTRIDRIE-SDDGTVVTVTDFAAYYRTVISGSA 2654
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--L 315
I + + G G+D+V + + G+D+ G SG DT
Sbjct: 2655 AADVITGSRGPDVIAGGDGHDLVHAGAGRDEIEGGEGDDLLFGESGDDTLHDDRGWNHLS 2714
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI--DSVNVKQRSILEYTASYEDLIQ 373
+ + Y A D LS L D + ++ +I
Sbjct: 2715 GGLGNDNLSGTGYLAGGPGSDTLSGSGMLDGGAGDDWYDIRGAGATIVFATGDGHDRVIA 2774
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 73/300 (24%), Gaps = 33/300 (11%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A TV+E + +SA++ ++ +D DG +G D F
Sbjct: 3478 ADGTVVEGRDAFARLHHQRTSSASDTLIGTTASDAIDGGAGDDVLF-------------A 3524
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ +D LS + L A + L G D
Sbjct: 3525 GGGDDSVSGGPGRDLLSG------GPGSDSLFGGGEDDALHGDAGNDWLEGGAGNDWLSG 3578
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ + + + + DD + D A + A +
Sbjct: 3579 GDGVDTYHFDGHFGLDTVAGGMVRTSDD--AIEFGDGIAPDDVSV--------RLAAGGS 3628
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ + + E RF + L GSD
Sbjct: 3629 STLLLDVPAVAGRVQVDEGWQPGAPGEGARLALAEIRFADGTRWTTAEVAARLLA--GSD 3686
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
G + G + D + ++ L + G DH G ++
Sbjct: 3687 DGDRLLGSVVDDRIAGGSGD--DTIFGARGNDALAGGEGNDRLDGGEGNDHLQGDGGDDA 3744
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 47/294 (15%), Positives = 78/294 (26%), Gaps = 38/294 (12%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------YYAPSYLYKIYRFE 322
+ + G G+D++ G++ N++ G D G SG D+ +
Sbjct: 2891 DRLFGGDGSDLLTGDAGNDLIDGGDGADQLLGGSGDDSLRAGADDTLDGGAGRDSYTLAG 2950
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCI--------------DSVNVKQRSILEYTASY 368
+ D LS E R + I + +E +A
Sbjct: 2951 GTQTLRFGPGSGADTLSWSESSRRGARLIVELASDLLPEHVRVERQANALSIAIEGSADA 3010
Query: 369 EDLIQVI-GQDVFESMKHFYEFGLSEGRDITFD--SYLYLGSYDDLRNVFGSDRGA---- 421
L+ D + + + G G D G+ D NV D +
Sbjct: 3011 LSLVSWFTDDDEPPATELRFASGAVWGIDELLSLLPAASNGNGDFRDNVLTGDATSRLLV 3070
Query: 422 ----AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ G L+ A ++ L D G D + G
Sbjct: 3071 GRAGNDVLAGSEGNDNLDGGSGADQLDGGAGNDALSGGDGDDVLFGGAGND-LLDGGRGA 3129
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
R Y+ S + GS G A +L+ IA
Sbjct: 3130 DRLDGGAGDDYVNSRE---AAGGSAAADTIVFAYGSGAD---TLTASDSLDVIA 3177
Score = 46.7 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 68/523 (13%), Positives = 109/523 (20%), Gaps = 74/523 (14%)
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
+ D G G TI + G
Sbjct: 3678 AARLLAGSDDGDRLLGSVVDDRIAGGSGDDTIFGARGNDALA--------GGEGNDRLDG 3729
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
G ND+ +S D + + +D++ S G+
Sbjct: 3730 GEGNDHLQGDGGDDALSGGEGNDHLRGGAG--------NDVLIGGPGSDVYHFSRGDGHD 3781
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
I + T+ G D+ + S + + ++
Sbjct: 3782 LIADSTIQPADVDTLEFGPGIAPFDVLHRVVDGQLLLDIAGSEDRVTLVAHDQPLSGVKR 3841
Query: 268 IESVVGSSGNDVVIGNSANNV-FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
I G+ + S NV SG ++ LDT A +
Sbjct: 3842 IRFSDGTVIDPRTWTPSERNVVLAVGSGAQTIPAAARLDTLVVGAGIAADTLTLGRAGED 3901
Query: 327 VYDANEHKQDFLSD---------VERLRFADQCI-----------DSVNVKQRSIL---- 362
+ A L V +LR AD + +L
Sbjct: 3902 LLVAAAADSLRLRGWFANPPTQSVLQLRLADGTLWSAAEMSRQAAAMDGGDGDDVLSIAA 3961
Query: 363 ------EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD---SYLYLGSYDDLRN 413
+ A + L G D G D +YL D
Sbjct: 3962 AWSGRLDGGAGNDRLSGGDGDDELRGGAGNDVLDGGFGADALIGGPGDDVYLADELDTVL 4021
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKAL-------EYIASHEDLINAFADAPDLVQVG 466
R V+ ++F+AL A+ L+ A G
Sbjct: 4022 ELADGGTDTLRMVALTDVELPAEIESFEALGNAAIDLTGNAADNRLLGTRAANRIEGGDG 4081
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSY-----------------DDLRNVFGSDRGAAARH 509
D G + Y+ L ++
Sbjct: 4082 NDTLDGGGGADTLLGGRGDDTYVVDNAADTIVERRGEGNDTLRSSLSQALTAEVSVENIE 4141
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D L A + L D AG D
Sbjct: 4142 LTGAANLYAFGDDGNNRLLGNAGNNALRGYAGDDTLDGGAGAD 4184
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 46/338 (13%), Positives = 90/338 (26%), Gaps = 50/338 (14%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW-ALGEWSKVVDLTFE 71
+ +L + ++ I D + + EL + R AL + ++
Sbjct: 3989 AGNDVLDGGFGADALIGGPGDDVYLADELDTVLELADGGTDTLRMVALTDVELPAEIESF 4048
Query: 72 ETSIHSDIKFISS-------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
E ++ I + AD G G T + NA
Sbjct: 4049 EALGNAAIDLTGNAADNRLLGTRAANRIEGGDGNDTLDGGGGADTLLGGRGDDTYVVDNA 4108
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
I G ND+ +S+ + S+ + A
Sbjct: 4109 ADTIVERRG-------------------EGNDTLRSSLSQALTAEVSVENIELTGAANLY 4149
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
++ G G+ Y + + GDD+ + + I+
Sbjct: 4150 AFGDDGNNRLLG-NAGNNALRGYAGDDTLDGGAGADVLQGGTGDDVYVADSV---LDRIE 4205
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND-------- 296
+ S + T+A + ++ GS+ D GNS N + ++
Sbjct: 4206 EAPGAGSDSVRASASHTLADNVENLTLTGSAAIDG-TGNSGANRLTGNDADNRLGGGGGD 4264
Query: 297 ----------VFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ DG +G D F + +
Sbjct: 4265 DVLDGGGGNDILDGGAGNDRFVFAYGYGQDLVIDNGTG 4302
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 69/545 (12%), Positives = 126/545 (23%), Gaps = 120/545 (22%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G G++ Y+ + I D GDD L + + E+ +
Sbjct: 2240 DGGTGDDTYRF----EAGDGGDHIVDRDGDDTLRFGAGITADDVQIVAGETGDVVLQRYG 2295
Query: 259 N-------------------------MTIAQHTV-----IESVVG---SSGNDVVIGNSA 285
+ + A TV +E+ ++G+D + G+S
Sbjct: 2296 SADSVVLQRGPGVPSEPPRSLPLIEHVEFADGTVWSADDVENYATRPATTGSDTLDGSSR 2355
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----AIIVYDANEHKQDFL--- 338
+ + G+D+ G G D + + I + V + D L
Sbjct: 2356 SEIIDGLGGDDLVSGGGGGDRYVFRQGYGRLTISDSGADAGQSDSVLFGAGLQPDALIVR 2415
Query: 339 ------------------------------SDVERLRFADQC------------------ 350
+ER FAD
Sbjct: 2416 REGSALVLDFVDSADQLRVLRSFERLASDRQRIERFVFADGSEWDMDEIERRLVLAPASE 2475
Query: 351 --IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS- 407
+ +++ A + + G DV + G D +
Sbjct: 2476 AAESIYGSSRNDVIDGLAGSDWIEGSSGDDVLDGGVGADRLFGDAGDDTLTGGASAVDDR 2535
Query: 408 -YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN--AFADAPDLVQ 464
Y+ + +G + + G + + + N F
Sbjct: 2536 HYEYAYDQYGDGFHVTSHDRLQGGAGNDTYVIQADSGFDEITDAEGANRIVFGAGLSAEN 2595
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA 523
V +N G E R YL + + + D + + A
Sbjct: 2596 VIVSERNNLGWPETRVDYGPGAFYLAAGTRIDRIESDDGTVVTVTDFAAYYRTVISGSAA 2655
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVF 583
+ + + AG+D EG + F T +DD
Sbjct: 2656 ADVITGSRGPDVIAGGDGHDLVHAGAGRD---EIEGGEGDDLLFGESGDDTLHDD----- 2707
Query: 584 GSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDY 643
G + + D S D D + D
Sbjct: 2708 -------------RGWNHLSGGLGNDNLSGTGYLAGGPGSDTLSGSGMLDGGAGDDWYDI 2754
Query: 644 FGDGN 648
G G
Sbjct: 2755 RGAGA 2759
Score = 44.4 bits (103), Expect = 0.067, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
E+ ++ + I +++ G +GND + G A + G D+ DG +G D
Sbjct: 3325 GAETIAAAEASPYDDRIHGLGGKDTLYGGAGNDSLYGGDAADFLVGDGGADLIDGGAGDD 3384
Query: 306 TFFYYAPSYLYKIYRFEN 323
++ + A L + N
Sbjct: 3385 SYRFDADDTLVFGFDSGN 3402
Score = 42.9 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 29/102 (28%), Gaps = 2/102 (1%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VGS GND + + + GND G +G D + +
Sbjct: 1767 LVGSDGNDSLSADDGADRVLGLLGNDTITGGAGDDLLYGAGDTSPGDDAGAFVVDDDVID 1826
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
D L F + + + Y+ ++
Sbjct: 1827 GGAGNDTLDGGFLGDFD--VLSGGTGDDTYVFRRGSGYDQIV 1866
Score = 42.1 bits (97), Expect = 0.32, Method: Composition-based stats.
Identities = 45/306 (14%), Positives = 82/306 (26%), Gaps = 28/306 (9%)
Query: 277 NDVVIGNSANNVFFESSGND-VFDGSSGLDTFFYYAPSYLY--------KIYRFENAIIV 327
DVV +SA + G+D V+ G D + + +++ F A
Sbjct: 837 RDVVYDSSAADRIATGGGDDNVYRKRGGDDVVDLGEGNDDFWTLDGTSGRVHAFGGAGRD 896
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY----TASYEDLIQVIGQDVFESM 383
Y +D + E F D + + E A + D+ ++
Sbjct: 897 YLGAGSGRDTVEGGEGGDFVYGSSDDDQLYGDAQGETADLIAAGADQAASGAQGDLVDAE 956
Query: 384 KHFYEFGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
E G D+ D + G DD + + V E P +
Sbjct: 957 DGDDEVFTGAGNDLIAGGDGDDLIVAGGGDDWVWGDWNVWAPIEEPWRDWTVTEKAAPTS 1016
Query: 440 FKALEYIAS----HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
Y ++ + D G D G ++ + G+ D
Sbjct: 1017 TGDTYYSYDLAHIFDESTDGSGDDTIYTGAGDDVAMGEGGDDILILEDGDDRAWGAAGDD 1076
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ G+ + + L+ + L + L AG D+
Sbjct: 1077 LLLGGAGKDFLVG-------DTRADLAGADYLDGGDGDDVLFAGAGEDVLLGGAGDDNLW 1129
Query: 556 NFGYEE 561
G
Sbjct: 1130 GDGRAG 1135
Score = 40.5 bits (93), Expect = 0.86, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
D + G +++ +GND+ DG G D S + + + A
Sbjct: 2890 ADRLFGGDGSDLLTGDAGNDLIDGGDGADQLL--GGSGDDSLRAGADDTLDGGAGRDSYT 2947
Query: 337 FLSDVERLRFADQCIDSV 354
+ LRF
Sbjct: 2948 LAGGTQTLRFGPGSGADT 2965
Score = 38.2 bits (87), Expect = 4.4, Method: Composition-based stats.
Identities = 41/359 (11%), Positives = 85/359 (23%), Gaps = 29/359 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + G L + L + + + G +++ +
Sbjct: 2814 GESLAGVVAASELVFADGTVWGRLEIAARTHLPEPLPSLADDVLSGGALADSLSGLAGDD 2873
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G G+D + G + F G+D+ G +G D ++ +
Sbjct: 2874 LLAGGGGDDTLDGGEGADRLFGGDGSDLLTGDAGNDLI--DGGDGADQLLGGSGDDSLRA 2931
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ D + + A Q + + L
Sbjct: 2932 GADDTLDGGAGRDSYTLAGGT-------QTLRFGPGSGADTLSWSESSRRGA------RL 2978
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS- 448
+ D+ + + L +A + + P A + +
Sbjct: 2979 IVELASDLLPEHVRVERQANALSIAIEG---SADALSLVSWFTDDDEPPATELRFASGAV 3035
Query: 449 -HEDLINAFADAPDLVQVGKDHFSNFGCEEGRF----VTFDSYLYLGSYDDLRNVFGSDR 503
D + + A G R D D+L G+D+
Sbjct: 3036 WGIDELLSLLPAASNGNGDFRDNVLTGDATSRLLVGRAGNDVLAGSEGNDNLDGGSGADQ 3095
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
G D L A ++ L AG D+ ++ G
Sbjct: 3096 LD-----GGAGNDALSGGDGDDVLFGGAGNDLLDGGRGADRLDGGAGDDYVNSREAAGG 3149
>gi|218516680|ref|ZP_03513520.1| putative rhizobiocin/RTX toxin and hemolysin-type calcium binding
protein [Rhizobium etli 8C-3]
Length = 656
Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats.
Identities = 66/541 (12%), Positives = 133/541 (24%), Gaps = 45/541 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + R L ++ + + E + F+ N T
Sbjct: 91 DTYIVDNAGGIVTEAADEGIDTVRTNLSAYT--LGVNVENLTYIGTAAFVGIGNSLDNTI 148
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D D G G ++ + + D
Sbjct: 149 TSGAAADTLSGGDGNDTLNGGAGADRLIGGAGDD----------TYVVDNAGDIVTEAAD 198
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ T++ Y + + G + +A GA
Sbjct: 199 AGTDTVRTTLAGYTLGNNVENLTYTGSANFSGAGNGLANTITGGA-----------GNDM 247
Query: 213 QKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ T+ G D DL + + T S T
Sbjct: 248 LNGAAGADTLIGGAGHDTYIVDDAGDLVTEAADEGTDTVRTNLASYTLTGNVENLSFAGT 307
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ G++ ++ + G +A + +GND +G +G D+ I
Sbjct: 308 GAFAGTGNNLDNTLTGGAAADTLSGDAGNDTLNGGAGTDSLI--GGEGDDTYIVDNAGDI 365
Query: 327 VYDANEHKQDFL----------SDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVI 375
V ++ + D + SDVE L F + + A + L
Sbjct: 366 VTESADEGADTVRTTLTSYTLGSDVENLSFVGTAAFAGTGNSLANTITGGAGNDTLDGAA 425
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLY-LGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D + + DI ++ + + + + Y G
Sbjct: 426 GADSLIGGAGNDTYIIDNAGDIVTEAAVVGIDTVRTTLAAYTLGANVENLQYTGSASFTG 485
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ A ++ L + G D + + + + +
Sbjct: 486 TGNALVNTITGGAGNDTLDGGAGNDTLDGGAGDDIYVVDSASDVIKDSAGTDEVRTALAA 545
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
++ Y G + A ++ L + AG D +
Sbjct: 546 YSIAALANVENLT--YTGSANFTGTGNALANMITGGAGNDMLNGGAGADSLIGGAGNDTY 603
Query: 555 S 555
Sbjct: 604 I 604
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 59/489 (12%), Positives = 117/489 (23%), Gaps = 71/489 (14%)
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L + G+ +DN + ++ A D V
Sbjct: 38 LTYIGTTAFVGTGNDLDNTITGGAAADTLSGGAGNDTLNGGAGADRLIGGAGDDTYIVDN 97
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G + I + + + IG + + + ++
Sbjct: 98 AGGIVTEAADEGIDTVRTNLSAYTLGVNVENLTYIGTAAFVGIGNSLDNTITSGAAADTL 157
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVI-------------------------------- 281
G + N T+ + ++G +G+D +
Sbjct: 158 SGGDGNDTLNGGAGADRLIGGAGDDTYVVDNAGDIVTEAADAGTDTVRTTLAGYTLGNNV 217
Query: 282 --------------GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
GN N +GND+ +G++G DT + + +V
Sbjct: 218 ENLTYTGSANFSGAGNGLANTITGGAGNDMLNGAAGADTLI--GGAGHDTYIVDDAGDLV 275
Query: 328 YDANEHKQDFLS----------DVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIG 376
+A + D + +VE L FA + L A+ + L G
Sbjct: 276 TEAADEGTDTVRTNLASYTLTGNVENLSFAGTGAFAGTGNNLDNTLTGGAAADTLSGDAG 335
Query: 377 QDVFESMKHFYEFGLSEGRDITF----------DSYLYLGSYDDLRNVFGSDRGAAARHY 426
D EG D + + + +
Sbjct: 336 NDTLNGGAGTDSLIGGEGDDTYIVDNAGDIVTESADEGADTVRTTLTSYTLGSDVENLSF 395
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ G + A ++ L A + G D + G VT +
Sbjct: 396 VGTAAFAGTGNSLANTITGGAGNDTLDGAAGADSLIGGAGNDTYII--DNAGDIVTEAAV 453
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
+ + + + Y G + A ++ L +
Sbjct: 454 VGIDTVRTTLAAYTLGANVENLQYTGSASFTGTGNALVNTITGGAGNDTLDGGAGNDTLD 513
Query: 547 VQAGKDHFS 555
AG D +
Sbjct: 514 GGAGDDIYV 522
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/340 (13%), Positives = 82/340 (24%), Gaps = 21/340 (6%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
DL + + T S + T G+ ++ + G +A +
Sbjct: 9 DLVIEAADAGIDTVRTTLASYTLDSDVEHLTYIGTTAFVGTGNDLDNTITGGAAADTLSG 68
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN--------AIIVYDANEHKQDFLSDVER 343
+GND +G +G D A Y + I N +VE
Sbjct: 69 GAGNDTLNGGAGADRLIGGAGDDTYIVDNAGGIVTEAADEGIDTVRTNLSAYTLGVNVEN 128
Query: 344 LRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF--- 399
L + + + + A+ + L G D G D
Sbjct: 129 LTYIGTAAFVGIGNSLDNTITSGAAADTLSGGDGNDTLNGGAGADRLIGGAGDDTYVVDN 188
Query: 400 -------DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
+ + + Y G + A ++ L
Sbjct: 189 AGDIVTEAADAGTDTVRTTLAGYTLGNNVENLTYTGSANFSGAGNGLANTITGGAGNDML 248
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
A + G D + + G VT + + + +
Sbjct: 249 NGAAGADTLIGGAGHDTYI--VDDAGDLVTEAADEGTDTVRTNLASYTLTGNVENLSFAG 306
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G G + L A+ + L + AG D
Sbjct: 307 TGAFAGTGNNLDNTLTGGAAADTLSGDAGNDTLNGGAGTD 346
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/334 (13%), Positives = 85/334 (25%), Gaps = 45/334 (13%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEW---SKVVDLTFEETSIHSDIKFISSNNGYV 89
D +TE + R L + S V +L+F F + N
Sbjct: 355 DTYIVDNAGDIVTESADEGADTVRTTLTSYTLGSDVENLSFV-----GTAAFAGTGNSLA 409
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
T + AD G G T + + +
Sbjct: 410 NTITGGAGNDTLDGAAGADSLIGGAGNDTYI-------------------IDNAGDIVTE 450
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
D+ T++ +Y + + G + + + GA
Sbjct: 451 AAVVGIDTVRTTLAAYTLGANVENLQYTGSASFTGTGNALVNTITGGA-----------G 499
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
T+ GDD+ D+ + + ++S
Sbjct: 500 NDTLDGGAGNDTLDGGAGDDIYVVDSASDVIKDSAGTDEVRTALAAYSIAALANVENLTY 559
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G++ +++ G + N++ +G D G +G DT+ L
Sbjct: 560 TGSANFTGTGNALANMITGGAGNDMLNGGAGADSLIGGAGNDTYIVDHAGDLVIEAADAG 619
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
V SDVE L +
Sbjct: 620 IDTVRT-TLASYTLDSDVEHLTYIGTTAFVGTGN 652
>gi|329848567|ref|ZP_08263595.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843630|gb|EGF93199.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 998
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 50/356 (14%), Positives = 108/356 (30%), Gaps = 4/356 (1%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G Y+ ++ G ++ ++V G+ ND ++GN+ N+ GND
Sbjct: 468 GTEVTYLSSAAMPHLTLNGNAGPNSLFGGGGNDTVNGNGANDRLVGNAGNDRLDGGVGND 527
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+G +G DT++ A + + + + F I+
Sbjct: 528 TMEGGAGDDTYYVDATTDSIVELTNQGFDSAFSSATFSLAFTFIDNLYLTGSANINGTGN 587
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
Q +++ T L D + +S D+ ++ + F
Sbjct: 588 GQANLITGTVGNNKLDGGANNDTLNGGMGDDTYVISNVGDVINENANEGTDTVESAITFT 647
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
I G L L + +Q D+
Sbjct: 648 LSNVLENLTLIGTTDINGTGNAGNNILTGNTGLNVLTGGAGNDTYNIQNTGDNVVEAAN- 706
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHED 535
EG + + Y S + N+ + G+A + +G+ + L+ ++++
Sbjct: 707 EGTDLINSTVTYSLSGRQVENL--TLTGSAIVNATGNGLANILTGNGANNVLDGGSNNDT 764
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA 591
+ + L+ A D + E +I + L + + + G+ A
Sbjct: 765 MAGGAGNDTYLISAVGDVVTENPNEGIDTIQSSFTTTLGANVENVTLNGAADINAT 820
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 58/397 (14%), Positives = 119/397 (29%), Gaps = 43/397 (10%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G++ Y ++ D +++LT G + ++ ++S + N+
Sbjct: 533 AGDDTYYVDATT--------------DSIVELTNQGFDSAF---SSATFSLAFTFIDNLY 575
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ I + G+ +++ G NN + ND +G G DT+ + I
Sbjct: 576 LTGSANI-NGTGNGQANLITGTVGNNKLDGGANNDTLNGGMGDDTYVI--SNVGDVINEN 632
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
N + + +E L I+ +IL L G D +
Sbjct: 633 ANEGTDTVESAITFTLSNVLENLTLIGTTDINGTGNAGNNILTGNTGLNVLTGGAGNDTY 692
Query: 381 ESMKHFYEF--GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+EG D+ + Y S + N+ + G+A + +G+ +
Sbjct: 693 NIQNTGDNVVEAANEGTDLINSTVTYSLSGRQVENL--TLTGSAIVNATGNGLANILTGN 750
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ S+ D + A + EG +++
Sbjct: 751 GANNVLDGGSNNDTMAGGAGNDTYLISAVGDVVTENPNEGIDT-------------IQSS 797
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH---EDLINAFADAPDLVQAGKDHFS 555
F + GA + +G + N ++ + L + +Q D+
Sbjct: 798 FTTTLGANVENVTLNGAADI-NATGNALNNVLSGNYGINVLTGGAGNDTYYIQNAGDNVV 856
Query: 556 NFGYEEGRSITFNPDLYLT-SYDDLWNVFGSDRSAAA 591
I + L Y + + GSD A
Sbjct: 857 EVSGGGSDVIFSSVTYSLNLRYAETLILNGSDNVNAT 893
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/438 (10%), Positives = 99/438 (22%), Gaps = 40/438 (9%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + I EL + A + + + + NG
Sbjct: 536 DTYYVDATTDSIVELTNQGFDSAFSSATFSLAFTFID--NLYLTGSANINGTGNGQANLI 593
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D G+G T + N I + +
Sbjct: 594 TGTVGNNKLDGGANNDTLNGGMGDDTYVISNVGDVINENANEGTDTVESAITFTLSNVLE 653
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCA-TPMVSDIVAVQKIYGAPKGSLGN-NIYKIE 210
T + ++++ + G T + + G N I
Sbjct: 654 NLTLIGTTDINGTGNAGNNILTGNTGLNVLTGGAGNDTYNIQNTGDNVVEAANEGTDLIN 713
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
S + + + + G I + + + G N T+A ++
Sbjct: 714 STVTYSLSGRQVENLTLTGSAIVNATGNGLANILTGNGANNVLDGGSNNDTMAGGAGNDT 773
Query: 271 VV------------------------------------GSSGNDVVIGNSANNVFFESSG 294
+ + + GN+ NNV + G
Sbjct: 774 YLISAVGDVVTENPNEGIDTIQSSFTTTLGANVENVTLNGAADINATGNALNNVLSGNYG 833
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+V G +G DT++ + +++ + + + + +++
Sbjct: 834 INVLTGGAGNDTYYIQNAGDNVVEVSGGGSDVIFSSVTYSLNLRYAETLILNGSDNVNAT 893
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ L + G D F + D +
Sbjct: 894 GNSLGNTLGGNFGSNIINGKGGADNLSGGFGADIFLFDANSGTDTITDFSAAQNDSINIA 953
Query: 415 FGSDRGAAARHYITHGVK 432
+ A +G+
Sbjct: 954 AYTGGVANVGLVAQNGIS 971
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 43/303 (14%), Positives = 88/303 (29%), Gaps = 34/303 (11%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E ++ ++ NG + + D G G T L
Sbjct: 726 ENLTLTGSAIVNATGNGLANILTGNGANNVLDGGSNNDTMAGGAGNDTYLISAV------ 779
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
V + + D+ +S + + + +DI A
Sbjct: 780 -------------GDVVTENPNEGIDTIQSSFTTTLGANVENVTLNGA-------ADINA 819
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G ++ + Y I V + + GD++++++ G + +
Sbjct: 820 T----GNALNNVLSGNYGINVLTGGAGNDTYYIQNAGDNVVEVSGGGSDVIFSSVTY--- 872
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S+ I + + G+S + + GN +N+ G D G G D F +
Sbjct: 873 -SLNLRYAETLILNGSDNVNATGNSLGNTLGGNFGSNIINGKGGADNLSGGFGADIFLFD 931
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A S I F A +++V + + +I A+ D
Sbjct: 932 ANSGTDTITDFSAAQNDSINIAAYTGGVANVGLVAQNGISVLITLGGGNTITVNNATQAD 991
Query: 371 LIQ 373
++
Sbjct: 992 VLA 994
>gi|221122763|ref|XP_002164594.1| PREDICTED: similar to LOC100127631 protein [Hydra magnipapillata]
Length = 359
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 64/201 (31%), Gaps = 55/201 (27%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+LL W + YK + + + ++ R A WS V LTF E +
Sbjct: 92 YLLWHTKWPTKTLTYKFENTGADLPAKTV-------KDTVRKAFNMWSSVTPLTFTEVTE 144
Query: 76 -HSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
I + + P+ + +F D+ + W +GT
Sbjct: 145 RRGHINIGFYSGTHGDGGDFFGPGGTLAHAFYPQNGNLHF-----DENENWVVN-QRGTD 198
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
L A+HEIGHA+G+ H S ++M +
Sbjct: 199 LLEIAVHEIGHAIGIQHS-------------------SIRGTIMF-------PTYFGYRS 232
Query: 180 CATPMVSDIVAVQKIYGAPKG 200
DI AVQ +YG G
Sbjct: 233 NLQLHDDDIKAVQALYGVGTG 253
>gi|330957671|gb|EGH57931.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 1610
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/319 (11%), Positives = 82/319 (25%), Gaps = 12/319 (3%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL S ++ ++ G+S +D ++G + N++ G D G G
Sbjct: 1201 DLGFSGNSGDNNNPADIVSGGQNEGGNIFGTSDDDTLVGGTGNDILDGDQGADDMTGGDG 1260
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + I + + ++VE L I++ ++++
Sbjct: 1261 NDIYVVDNALDTVTESNDSPSQIDTVVSSVSWELGANVENLMLTGFSAINATGNALKNVI 1320
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS-----YLYLGSYDDLRNVFGS 417
A+ L G D+ + + + D ++ + + +
Sbjct: 1321 TGNAANNILDGGAGADLLTGGDGSDSYVVDDVADRVVETATDAQTGGIDTVYSSLASYTL 1380
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH-FSNFGCE 476
+ L A L +
Sbjct: 1381 GANLENLVITSSAAANATGNALDNVLYAGAGDNVLDGRDGNDTVSYLFATAGVTVALNTS 1440
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ L ++L +D ++ EG L A + L
Sbjct: 1441 AQQATGGSGLDTLKGTENLTGSQFADALTGNKNANVLIGGEG-----NDTLSGGAGDDVL 1495
Query: 537 INAFADAPDLVQAGKDHFS 555
I + G DH+
Sbjct: 1496 IGGSGADTLIGGTGADHYV 1514
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/324 (12%), Positives = 94/324 (29%), Gaps = 20/324 (6%)
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY----KIEVQQKDSPFIQTIYDSG 226
+ + S +DIV+ + G ++ +
Sbjct: 1200 NDLGFSGNSGDNNNPADIVSGGQNEGGNIFGTSDDDTLVGGTGNDILDGDQGADDMTGGD 1259
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSI--------GGYEKNMTIAQHTVIESVVGSSGND 278
G+D+ + + + ++ G +N+ + + I + G++ +
Sbjct: 1260 GNDIYVVDNALDTVTESNDSPSQIDTVVSSVSWELGANVENLMLTGFSAI-NATGNALKN 1318
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTF---FYYAPSYLYKIYRFENAIIVYDANEHKQ 335
V+ GN+ANN+ +G D+ G G D++ I ++
Sbjct: 1319 VITGNAANNILDGGAGADLLTGGDGSDSYVVDDVADRVVETATDAQTGGIDTVYSSLASY 1378
Query: 336 DFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+++E L + ++ ++L A L G D + F G++
Sbjct: 1379 TLGANLENLVITSSAAANATGNALDNVLYAGAGDNVLDGRDGNDTVSYL--FATAGVTVA 1436
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE-GRNPDAFKALEYIASHEDLI 453
+ + D L+ A + + L A + LI
Sbjct: 1437 LNTSAQQATGGSGLDTLKGTENLTGSQFADALTGNKNANVLIGGEGNDTLSGGAGDDVLI 1496
Query: 454 NAFADAPDLVQVGKDHFSNFGCEE 477
+ G DH+ +
Sbjct: 1497 GGSGADTLIGGTGADHYVFNSAND 1520
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/293 (15%), Positives = 88/293 (30%), Gaps = 14/293 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + + ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDAFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I E + G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 SEANDIITGSAANELIFGLAGKDTLNGGAGDDILVGGAGADKLSGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ +V D + LS++ ++N+ + L+ T
Sbjct: 447 YRTATVSATDLVSDFDISQDRIDLSNLGFTGLGSGKAGTLNISYNATLDRTYIKSLDADS 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ + D L G+D GV
Sbjct: 507 DGNRFELGLSGNLKDTLNASHFMFQRVIEGTAGGDTLTGTEGNDLIN-----GNAGVDRL 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
L A + L + D + N+ + +
Sbjct: 562 NGGAGADTLTGGADADILTGGAGADLFIYTSRLDSYRNYNASGTKQSDTITDF 614
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 62/487 (12%), Positives = 121/487 (24%), Gaps = 27/487 (5%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ + + D G G ++ ++ G +
Sbjct: 382 VTVQGSEANDIITGSAANELIFGLAGKDTLNGGAGDDILVGGAGADKLSGGAGAD-TFRF 440
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ Y D +S S + + +I +
Sbjct: 441 DQLTDSYRTATVSATDLVSDFDISQDRIDLSNLGFTGLGSGKAGTLNI--------SYNA 492
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+L K D + D L+ + + I+ ++ G E N
Sbjct: 493 TLDRTYIKSLDADSDGNRFELGLSGNLKDTLNASHF-MFQRVIEGTAGG-DTLTGTEGND 550
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + ++ + G +G D + G + ++ +G D+F +S LD++ Y S +
Sbjct: 551 LINGNAGVDRLNGGAGADTLTGGADADILTGGAGADLFIYTSRLDSYRNYNASGTKQSDT 610
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ D + L D +++ + + T + + G
Sbjct: 611 ITDFNTAEDRIDLSSIGLRG-----LGDGSANTIYLSVNADGSKTYVKTNAVDTTGNRFE 665
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+++ LS F + L + + +
Sbjct: 666 IALEGNLLDKLSASN-FIFSTASATNQAPVLNTPLIDQNVTELKAFSYAVQPGSFSDPDS 724
Query: 441 KALEYIASHED----LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
AL Y A+ D D+ L G + G D+ +
Sbjct: 725 TALTYSATLTDNSALPDWLTFDSKTLTFSGTPGGTASGLYSILLTASDATGASVADSFAI 784
Query: 497 NVFGSDRGA------AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
NV G A Y T G L + L A
Sbjct: 785 NVGNVAPGTLTGSQNAETLYGTEGDDTLLGLGGDDTLRGDTGADILNGGAGRDTLYGGAN 844
Query: 551 KDHFSNF 557
D F
Sbjct: 845 ADTFVYS 851
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 63/189 (33%), Gaps = 9/189 (4%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ D A+ S + + + SG +L
Sbjct: 716 PGSFSDPDSTALTYSATLTDNSALPDWLTFDSKTLTFSGTPGGTASGLYSILLTASDATG 775
Query: 240 KNY-----IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ I++ + ++ G + T+ ++++G G+D + G++ ++ +G
Sbjct: 776 ASVADSFAINVGNVAPGTLTGSQNAETLYGTEGDDTLLGLGGDDTLRGDTGADILNGGAG 835
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
D G + DTF Y + Y+ Y A + DF S +++ + + +
Sbjct: 836 RDTLYGGANADTFVYSTLTDSYRNYEAGG----LTATDTIADFTSGQDKIDVSALGVLGL 891
Query: 355 NVKQRSILE 363
+ L
Sbjct: 892 GNGENHTLY 900
>gi|163851091|ref|YP_001639134.1| hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
gi|163662696|gb|ABY30063.1| Hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
Length = 741
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 62/195 (31%), Gaps = 16/195 (8%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG D DL L + I ++ + + + + V+ G D V+
Sbjct: 371 GGTDGDDLILGTPCADDIAAGAG-DDNVDARGGDDLVDAGSGSDHVIAGDGADTVLAGPG 429
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
++V F +G D G +G D F + ++ ++ +D L
Sbjct: 430 DDVVFAGAGADRVSGGAGHDRLF--GEAGDDLLFGEAGDDLL--DGGEGRDILDG----- 480
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
D + + L A +DL G DV EG DI D
Sbjct: 481 -GDGDDLLLGGEGNDSLYGAAGADDLSGGTGADVLVGDAGDDRLQGGEGADILSD----- 534
Query: 406 GSYDDLRNVFGSDRG 420
G+ DL + D
Sbjct: 535 GAGRDLVSGEAGDDV 549
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/323 (14%), Positives = 89/323 (27%), Gaps = 41/323 (12%)
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHE-------IGHALG----LMHPGSYNGG 143
S + + + Y + G H IG G L P + +
Sbjct: 330 GSGWVFDADAPGPVTITYAVTDGEFSVARTAHLTVLERALIGGTDGDDLILGTPCADDIA 389
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ D L D ++ D V GA +
Sbjct: 390 AGAGDDNVDARGGDDLVDA---GSGSDHVIAGDGADTVLAGPGDDVV---FAGAGADRVS 443
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEK 258
+ ++ GDDLLD L GG + + L E S+ G
Sbjct: 444 GGA--GHDRLFGEAGDDLLFGEAGDDLLDGGEGRDILDGGDGDDLLLGGEGNDSLYGAAG 501
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
++ T + +VG +G+D + G ++ + +G D+ G +G D S ++
Sbjct: 502 ADDLSGGTGADVLVGDAGDDRLQGGEGADILSDGAGRDLVSGEAGDDVIILALDSAEDRV 561
Query: 319 YRFENAIIV-----------------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ A E D ++ VE + V + +
Sbjct: 562 DGGAGRDTLDLSAATVDLVVDLRNETVSAQELGLDRITSVEAIIAGSGDDRFVVGGRDLV 621
Query: 362 LEYTASYEDLIQVIGQDVFESMK 384
L + + + +
Sbjct: 622 LTGGGGGDVYAFAAPTEPRDGTR 644
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 66/247 (26%), Gaps = 23/247 (9%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV--GSSGNDVVIG 282
S G D + + T +++ G A TV+E + G+ G+D+++G
Sbjct: 322 SSGTVTADGSGWVFDADAPGPVTITYAVTDGEFSVARTAHLTVLERALIGGTDGDDLILG 381
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ +G+D D G D A S + + A V
Sbjct: 382 TPCADDIAAGAGDDNVDARGGDDLV--DAGSGSDHVIAGDGADTVLAGPGDD-------- 431
Query: 343 RLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ FA L A + L G D+ + EGRDI
Sbjct: 432 -VVFAGAGADRVSGGAGHDRLFGEAGDDLLFGEAGDDLLDG---------GEGRDILDGG 481
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
N A G L+ + L +
Sbjct: 482 DGDDLLLGGEGNDSLYGAAGADDLSGGTGADVLVGDAGDDRLQGGEGADILSDGAGRDLV 541
Query: 462 LVQVGKD 468
+ G D
Sbjct: 542 SGEAGDD 548
>gi|170744535|ref|YP_001773190.1| hypothetical protein M446_6498 [Methylobacterium sp. 4-46]
gi|168198809|gb|ACA20756.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 120
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYD 577
+ F + Y+A++ D+ P +H+ FG++EGR + F+ YL++
Sbjct: 22 SMGGFDPVFYLATYPDVAEH-GCDPL------EHYLTFGWKEGRDPSAQFSTSGYLSANP 74
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRAL 605
D+ HY HG+ EGR+
Sbjct: 75 DVAEA----GINPLVHYRMHGLAEGRSG 98
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 16/98 (16%)
Query: 472 NFGCEEGRFV----TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKA 526
R FD YL +Y D+ HY+T G KEGR+P A F
Sbjct: 11 AASRAPSRATWSMGGFDPVFYLATYPDVAEHG----CDPLEHYLTFGWKEGRDPSAQFST 66
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
Y++++ D+ A P + H+ G EGRS
Sbjct: 67 SGYLSANPDVAEA-GINPLV------HYRMHGLAEGRS 97
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 13/86 (15%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
F + Y+A++ D+ D +H+ FG +EGR + F + YL + D+
Sbjct: 24 GGFDPVFYLATYPDVAEHGCDP-------LEHYLTFGWKEGRDPSAQFSTSGYLSANPDV 76
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNP 521
+ HY HG+ EGR+
Sbjct: 77 AEAGIN----PLVHYRMHGLAEGRSG 98
Score = 57.1 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 457
FD YL +Y D+ HY+T G KEGR+P F Y++++ D+ A
Sbjct: 26 FDPVFYLATYPDVA----EHGCDPLEHYLTFGWKEGRDPSAQFSTSGYLSANPDVAEAGI 81
Query: 458 DAPDLVQVGKDHFSNFGCEEGRF 480
+ H+ G EGR
Sbjct: 82 NP-------LVHYRMHGLAEGRS 97
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
+ Y A+Y D + G D +H+ FG EGRD + F + YL + D+
Sbjct: 24 GGFDPVFYLATYPD-VAEHGCDPL---EHYLTFGWKEGRDPSAQFSTSGYLSANPDVAEA 79
Query: 415 FGSDRGAAARHYITHGVKEGRNP 437
HY HG+ EGR+
Sbjct: 80 ----GINPLVHYRMHGLAEGRSG 98
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKA 626
F+P YL +Y D+ +HY+T G KEGR S S + +A
Sbjct: 26 FDPVFYLATYPDV----AEHGCDPLEHYLTFGWKEGRD--PSAQFSTSGYLSANPDVAEA 79
>gi|329847956|ref|ZP_08262984.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843019|gb|EGF92588.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 542
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 54/285 (18%), Positives = 99/285 (34%), Gaps = 19/285 (6%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ T + + D D G G + + +G + N
Sbjct: 29 TLNGGSADDTIDGGTGNDVLSGGDGHDAMEGGTGHDRLDGGGGTDVL---IGSTGNDTLN 85
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
GG + ++ D +T+ + + +D + + S ++
Sbjct: 86 GGDGEDYLCAGFDGDRVMTNWGVDQLDGGAGLDTAVLFRGAATASIRFDLRDTSLTQYLD 145
Query: 202 LGNNIYKIEVQQ----------KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
G + ++E T + G+D LD G + +
Sbjct: 146 NGTGVVRVESVSLFSGRGADILTGGVRSDTFFGGAGNDTLDGWHEG----DLLIGEAGND 201
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G + +A +S+ G + ND + G++ +V +G+DV DG SGLDT Y
Sbjct: 202 LILGGNGDDRLAGGLGHDSLTGGTQNDTLSGDTGEDVLTGGAGDDVIDGGSGLDTAVYSG 261
Query: 312 PSYLYKIYRFENAIIVYDA--NEHKQDFLSDVERLRFADQCIDSV 354
Y I+R ++ +++ D N D L V+RL FAD +
Sbjct: 262 NKADYDIFRIDDGVVLRDLRPNGDGTDTLVLVDRLAFADGTVTMA 306
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 70/268 (26%), Gaps = 22/268 (8%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
++ +GG D LD + L ++ G + TI T + + G G+D +
Sbjct: 3 LWGTGGHDRLDGSGDSDQ----ILGVAGHDTLNGGSADDTIDGGTGNDVLSGGDGHDAME 58
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHK 334
G + ++ G DV GS+G DT + A ++ +
Sbjct: 59 GGTGHDRLDGGGGTDVLIGSTGNDTLNGGDGEDYLCAGFDGDRVMTNWGVDQLDGGAGLD 118
Query: 335 QDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
L + +RF + L G D+ F
Sbjct: 119 TAVLFRGAATASIRFDLRDTSLTQYLDNGTGVVRVESVSLFSGRGADILTGGVRSDTFFG 178
Query: 392 SEGRDIT----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G D L + +DL D A G L
Sbjct: 179 GAGNDTLDGWHEGDLLIGEAGNDLILGGNGDDRLA----GGLGHDSLTGGTQNDTLSGDT 234
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ L D G D G
Sbjct: 235 GEDVLTGGAGDDVIDGGSGLDTAVYSGN 262
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 67/227 (29%), Gaps = 21/227 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
Q T+ DD +D GG N + + ++ G + +
Sbjct: 16 GDSDQILGVAGHDTLNGGSADDTID----GGTGNDVLSGGDGHDAMEGGTGHDRLDGGGG 71
Query: 268 IESVVGSSGNDVVIGNSANNVFFESS---------GNDVFDGSSGLDTFFYYAPSYLYKI 318
+ ++GS+GND + G + G D DG +GLDT + + I
Sbjct: 72 TDVLIGSTGNDTLNGGDGEDYLCAGFDGDRVMTNWGVDQLDGGAGLDTAVLFRGAATASI 131
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLR-FADQCIDSVNVKQ-RSILEYTASYEDLIQVIG 376
RF+ + VE + F+ + D + A + L
Sbjct: 132 -RFDLRDTSLTQYLDNGTGVVRVESVSLFSGRGADILTGGVRSDTFFGGAGNDTLDGWHE 190
Query: 377 QDVFESMKHFYEFGLSEGRD-----ITFDSYLYLGSYDDLRNVFGSD 418
D+ G D + DS D L G D
Sbjct: 191 GDLLIGEAGNDLILGGNGDDRLAGGLGHDSLTGGTQNDTLSGDTGED 237
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/266 (12%), Positives = 64/266 (24%), Gaps = 10/266 (3%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
I T + G + I +++ G S +D + G + N+V G+D +G
Sbjct: 1 MILWGTGGHDRLDGSGDSDQILGVAGHDTLNGGSADDTIDGGTGNDVLSGGDGHDAMEGG 60
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRS 360
+G D + + + D +R+
Sbjct: 61 TGHDRL--DGGGGTDVLIGSTGNDTLNGGDGEDYLCAGFDGDRVMTNWGVDQLDGGAGLD 118
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
++ G L+ G D+ +
Sbjct: 119 TAVLFRGAATASIRFDLRDTSLTQYLDN---GTGVVRVESVSLFSGRGADIL----TGGV 171
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ + G L A ++ ++ D +G D + +
Sbjct: 172 RSDTFFGGAGNDTLDGWHEGDLLIGEAGNDLILGGNGDDRLAGGLGHDSLTGGTQNDTLS 231
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ G D GS A
Sbjct: 232 GDTGEDVLTGGAGDDVIDGGSGLDTA 257
>gi|86136272|ref|ZP_01054851.1| possible protease [Roseobacter sp. MED193]
gi|85827146|gb|EAQ47342.1| possible protease [Roseobacter sp. MED193]
Length = 715
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 61/459 (13%), Positives = 118/459 (25%), Gaps = 30/459 (6%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI---G 129
F + N + +W G G I ++ E+ G
Sbjct: 186 VRNTGTSSFSDGDLINTGLISTADGVAYLGNSYRDTIWNSGEMVGAISLNDGTDEVTNTG 245
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY---CATPMVS 186
+G + GS N + S + + T
Sbjct: 246 EIIGNISFGSENCTQDSLQNLGGTIIGNISFGTRSVSVDVVNSGTIKGNIYFGSETSAFD 305
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+ +I+G + S G + Y T+Y GG D + G +N
Sbjct: 306 SVENSGQIFGNVRFSTGRDTYT---ASGTGYVSGTVYGGGGSD----EMYGADQNDTFSG 358
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
E + G N T++ ++++ G +G+D + G + N++ +G+D G G+D
Sbjct: 359 DEGNDQLFGRGGNDTLSGGDGVDTLDGGAGDDSLSGGNHNDLLNGGAGDDSLSGEDGIDR 418
Query: 307 F----------------FYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQ 349
+ + + I + D + E L
Sbjct: 419 LIAGSGDDSLSGGVGDDVLNGGAGDDILLGGDGDDIHVGGAGDDNLDGGAGSEWLGGGTG 478
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
L + + G D+ G D+ +
Sbjct: 479 NDSLSGGDDNDTLSAGSGDDLANGDAGNDIVSGGSGNDTLSGGLGNDLLYGGQDDDTMNG 538
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
D N + G + + +++L D L G+D
Sbjct: 539 DDGNDVMRGQAGDDDMDGGAGADSMFGGTGQDNMFGSSGNDELHGYSGDDQLLGGAGRDM 598
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
++ + G + VF S +
Sbjct: 599 LFGGSGDDILVGGYGRDTMSGGSGEDVFVFLSAGESTFS 637
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 72/291 (24%), Gaps = 11/291 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + + D G +++ + + +G
Sbjct: 375 SGGDGVDTLDGGAGDDSLSGGNHNDLLNGGAGDDSLSGEDGIDRLIAGSGDDSLSGGVGD 434
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + G D D + + G + D +
Sbjct: 435 DVLNGGAGDDILLGGDGDDIHVGGAGDDNLDGGAGSEWLGGGTGNDSLSGGDDNDTLSAG 494
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTES 249
G + T+ G+DLL D T+ G N +
Sbjct: 495 SGDDLANGD----AGNDIVSGGSGNDTLSGGLGNDLLYGGQDDDTMNGDDGNDVMRGQAG 550
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G ++ T +++ GSSGND + G S ++ +G D+ G SG D
Sbjct: 551 DDDMDGGAGADSMFGGTGQDNMFGSSGNDELHGYSGDDQLLGGAGRDMLFGGSGDDILV- 609
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + + + F F
Sbjct: 610 -GGYGRDTMSGGSGEDVFVFLSAGESTFSQTDLIEDFETGVDRIDLSNMAD 659
>gi|296273027|ref|YP_003655658.1| hemolysin-type calcium-binding region [Arcobacter nitrofigilis DSM
7299]
gi|296097201|gb|ADG93151.1| Hemolysin-type calcium-binding region [Arcobacter nitrofigilis DSM
7299]
Length = 3735
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 94/270 (34%), Gaps = 30/270 (11%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S + D AD+ G G + +I H +D
Sbjct: 3028 GGSGNDNVLGSDNADLVYGGAGADAYHTEAG-DDIVHIDK-----EDIQANSSSFIDTGS 3081
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK--IEV 211
D+ ++ T +DI+ + I+ +
Sbjct: 3082 GFDTIYIDEARDVEFDVGTSNSEKIISGT--GNDIL-------KNSKNSDITIFGMEGDD 3132
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
S I + G D ++ + N I+L + SS GY + TI E++
Sbjct: 3133 TIFASSGIDILDGGEGIDTINFSNSNVGIN-INLENNTLSS--GYAQGDTI---VNFENI 3186
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-----IYRFENAII 326
VG++ +D + G++ +N+ GN++ +G+ G+DT + Y + F+
Sbjct: 3187 VGTNSDDNITGDTNDNIISALGGNNIINGNDGIDTVVFSGKLLDYYKNGNIVTNFDGTAT 3246
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNV 356
V+ + + L++VE+++F D +
Sbjct: 3247 VFTDS--GINELTNVEKIQFDDYTMYVDGT 3274
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 57/417 (13%), Positives = 115/417 (27%), Gaps = 47/417 (11%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
I + + ++ DK D+ G G + + I G
Sbjct: 2913 INIEPRDISGLDYIDGGDLDDTIVSGDKDDIVIVGSGNDLVFAGKGNDFINLGAGQDRVD 2972
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+ G + D++N+ F+ ++S D+++ M D+ +V+K G
Sbjct: 2973 AGEGNDTIVMDSEDFDNNLFINEIVSGGAGYDTVVIKDDKGVNFDM--DLTSVEKFVGG- 3029
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL------------TLIGGVKNYIDLN 246
S +Y G D + ++ID
Sbjct: 3030 ---------SGNDNVLGSDNADLVYGGAGADAYHTEAGDDIVHIDKEDIQANSSSFIDTG 3080
Query: 247 TESWSSIGGYEKNMTIAQHTVI-ESVVGSSGND----------VVIGNSANNVFFESSGN 295
+ + +++ T E ++ +GND + G ++ F SSG
Sbjct: 3081 SGFDTIYIDEARDVEFDVGTSNSEKIISGTGNDILKNSKNSDITIFGMEGDDTIFASSGI 3140
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D+ DG G+DT + + I N + + D + + E + + +
Sbjct: 3141 DILDGGEGIDTINFSNSNVGININLENNT---LSSGYAQGDTIVNFENIVGTNSDDNITG 3197
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+I+ + G D ++ + FD +
Sbjct: 3198 DTNDNIISALGGNNIINGNDGIDTVVFSGKLLDYYKNGNIVTNFDGT------ATVFTDS 3251
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASH---EDLINAFADAPDLVQVGKDH 469
G + + Y ++ ED F L H
Sbjct: 3252 GINELTNVEKIQFDDYTMYVDGTVNAPFVYEETNYTKEDTAVTFTVDSLLENDFSIH 3308
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 82/275 (29%), Gaps = 11/275 (4%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ + D G+G T+ + + L G GV+N
Sbjct: 1228 TGAGDDLVFAGSGKDNISLGLGTDTVTYEKSESGVHANLSDEGTLGDALGDTYDGVENLT 1287
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP--KGSLGNNIYKIEV 211
+ + S +D + + + I A + G +
Sbjct: 1288 GTNFDDYLIGDEGDNTLSGLDGNDILRGGEGADKLQGGEGIDLADYSDSTSGAEVNLENN 1347
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW--------SSIGGYEKNMTIA 263
D +I G + D + N I + G N I
Sbjct: 1348 YSNDGDTFDSIEGVQGSNFSDAIVGNDDGNIILSGAGDDRVSTGILDDIVHGGSGNDYIK 1407
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + + SG+D++IG S N++ + G + G G D Y S Y+I +N
Sbjct: 1408 GNEGNDELHAGSGDDILIGGSGNDILYSDEGKNTLIGDEGTDLVVYKGLSSDYEIMFGDN 1467
Query: 324 AIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVK 357
+ + + K D L D+E + F D
Sbjct: 1468 NTLFVKSKDGKTLDTLKDIEEIAFDDAVFTIDYAN 1502
Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 79/245 (32%), Gaps = 27/245 (11%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D D L++ + N + I G + + TI + V+ SGND+V
Sbjct: 2896 IVDENDIDT-SLSIANTIINIEPRDISGLDYIDGGDLDDTIVSGDKDDIVIVGSGNDLVF 2954
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY------KIYRFENAIIVYDANEHKQ 335
N+ +G D D G DT + + + V ++
Sbjct: 2955 AGKGNDFINLGAGQDRVDAGEGNDTIVMDSEDFDNNLFINEIVSGGAGYDTVVIKDDKGV 3014
Query: 336 DF---LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV------------- 379
+F L+ VE+ + + ++ A + G D+
Sbjct: 3015 NFDMDLTSVEKFVGGSGNDNVLGSDNADLVYGGAGADAYHTEAGDDIVHIDKEDIQANSS 3074
Query: 380 --FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
++ F + E RD+ FD + + + + + G+D +++ +
Sbjct: 3075 SFIDTGSGFDTIYIDEARDVEFD--VGTSNSEKIISGTGNDILKNSKNSDITIFGMEGDD 3132
Query: 438 DAFKA 442
F +
Sbjct: 3133 TIFAS 3137
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/267 (14%), Positives = 76/267 (28%), Gaps = 49/267 (18%)
Query: 203 GNNIYKIEV---QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW---SSIGGY 256
G+N+ + + ++ G D + L L Y + S G
Sbjct: 1213 GDNLIVLNEGKNSVETGAGDDLVFAGSGKDNISLGLGTDTVTYEKSESGVHANLSDEGTL 1272
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ +E++ G++ +D +IG+ +N GND+ G G D L
Sbjct: 1273 GDALGDTYD-GVENLTGTNFDDYLIGDEGDNTLSGLDGNDILRGGEGADKLQGGEGIDLA 1331
Query: 317 KIYRFENAIIVY--DANEHKQDFLSDVERLRFAD------------------QCIDSVNV 356
+ V + + D +E ++ ++
Sbjct: 1332 DYSDSTSGAEVNLENNYSNDGDTFDSIEGVQGSNFSDAIVGNDDGNIILSGAGDDRVSTG 1391
Query: 357 KQRSILEYTASYED------------------LIQVIGQDVFESMKHFYEFGLSEGRDIT 398
I+ + + LI G D+ S + EG D+
Sbjct: 1392 ILDDIVHGGSGNDYIKGNEGNDELHAGSGDDILIGGSGNDILYSDEGKNTLIGDEGTDLV 1451
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARH 425
+Y G D +FG + +
Sbjct: 1452 ----VYKGLSSDYEIMFGDNNTLFVKS 1474
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 46/375 (12%), Positives = 97/375 (25%), Gaps = 63/375 (16%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT-VIE 269
I G +D IG I E+ SS + + T + +
Sbjct: 1147 PNGTRVNLAALITTIGLEDGAGAIDIGDAFIDILGEDETISSYLDKFGSDNVYVDTALDD 1206
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+++++ N N +G+D+ SG D + + E+ +
Sbjct: 1207 KIHSYFGDNLIVLNEGKNSVETGAGDDLVFAGSGKDNISLGLGTDTVTYEKSESGVHANL 1266
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
++E D + L L + G D+ + +
Sbjct: 1267 SDEGTLGDALGDTY----DGVENLTGTNFDDYLIGDEGDNTLSGLDGNDILRGGEGADKL 1322
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
EG D L Y D + + + + + ++
Sbjct: 1323 QGGEGID--------LADYSDSTSGAEVN--------LENNYSNDGDTFDSIEGVQGSNF 1366
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
D I D ++ D + G + Y+ +
Sbjct: 1367 SDAIVGNDDGNIILSGAGDDRVSTGILDDIVHGGSGNDYIKGNE---------------- 1410
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD-HFSNFGYEEGRSITFN 568
+++L D + +G D +S+ G ++ +
Sbjct: 1411 ----------------------GNDELHAGSGDDILIGGSGNDILYSDEGKN---TLIGD 1445
Query: 569 PDLYLTSYDDLWNVF 583
L Y L + +
Sbjct: 1446 EGTDLVVYKGLSSDY 1460
Score = 40.5 bits (93), Expect = 0.84, Method: Composition-based stats.
Identities = 51/335 (15%), Positives = 95/335 (28%), Gaps = 44/335 (13%)
Query: 268 IESV---VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
IE++ + D + AN+V + ND +SG DT + + I N+
Sbjct: 2773 IENLSIETTTENIDDATFSDANDVIYTGGSNDRIYANSGNDTIYSDESNGNINISFNLNS 2832
Query: 325 IIVYDANEHK---------QDFLSD----------VERLRFADQCIDSVNVKQRSILEYT 365
+ K +S+ +E+ F D ++ Q +
Sbjct: 2833 SFDSARSNEKIIYKIEPLPTGTISNTGYISNGILIIEKDNF-DGILNLTLPYQTEAIALN 2891
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ + + D+ S+ E RDI+ Y+ G DD D
Sbjct: 2892 VTTNIVDE---NDIDTSLSIANTIINIEPRDISGLDYIDGGDLDDTIVSGDKDDIV---- 2944
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ G + A + + + ++ + F N
Sbjct: 2945 IVGSGNDLVFAGKGNDFINLGAGQDRVDAGEGNDTIVMDS--EDFDNNLFINEIVSGGAG 3002
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP- 544
Y + DD F D + + G D + A + D
Sbjct: 3003 YDTVVIKDDKGVNFDMDLTSVEKFVGGSGNDNVLGSDNADLVYGGAGADAYHTEAGDDIV 3062
Query: 545 ----DLVQAGKDHFSNFG-------YEEGRSITFN 568
+ +QA F + G +E R + F+
Sbjct: 3063 HIDKEDIQANSSSFIDTGSGFDTIYIDEARDVEFD 3097
Score = 37.8 bits (86), Expect = 5.2, Method: Composition-based stats.
Identities = 43/379 (11%), Positives = 96/379 (25%), Gaps = 43/379 (11%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV-- 288
+D + I S I N TI ++ S + ++ +N
Sbjct: 2785 IDDATFSDANDVI-YTGGSNDRIYANSGNDTIYSDESNGNINISFNLNSSFDSARSNEKI 2843
Query: 289 ----------FFESSGN----------DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++G D FDG L T Y + +
Sbjct: 2844 IYKIEPLPTGTISNTGYISNGILIIEKDNFDGILNL-TLPYQTEAIALNVTTNIVDENDI 2902
Query: 329 DANEHKQDFLSDVE--------RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D + + + ++E + D V+ + I+ + + + G D
Sbjct: 2903 DTSLSIANTIINIEPRDISGLDYIDGGDLDDTIVSGDKDDIVIVGSGNDLVFAGKGNDFI 2962
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGS----YDDLRNVFGSDRGAAARHYITHGVKEGRN 436
EG D + + + G D + + +
Sbjct: 2963 NLGAGQDRVDAGEGNDTIVMDSEDFDNNLFINEIVSGGAGYDTVVIKDDKGVNFDMDLTS 3022
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGK--DHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ F + NA + + + + +S ++ +
Sbjct: 3023 VEKFVGGSGNDNVLGSDNADLVYGGAGADAYHTEAGDDIVHIDKEDIQANSSSFIDTGSG 3082
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI--NAFADAPDLVQAGKD 552
++ + T ++ + L+ + + D+ D +G D
Sbjct: 3083 FDTIYIDEARDVEFDVGTSNSEKIISGTGNDILK-NSKNSDITIFGMEGDDTIFASSGID 3141
Query: 553 HFSNFGYEEGRSITFNPDL 571
G E +I F+
Sbjct: 3142 --ILDGGEGIDTINFSNSN 3158
>gi|329849060|ref|ZP_08264088.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844123|gb|EGF93692.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1854
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 70/570 (12%), Positives = 143/570 (25%), Gaps = 63/570 (11%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ D Y + + D G TI I
Sbjct: 1267 NDVLSGGDGNDGLVGRAYFFGVGPLTDNNVLNGDAGNDSLEGSGGNDTINGGTGDDSITS 1326
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD-----ASFGYCATPMV 185
+ +D D+ + + F +
Sbjct: 1327 TYNSGSVDVDPELGGIDVIDGGAGWDALYYNRIYGAQGLVYDFGRGATAEGFVATNGTVF 1386
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+I V+ G+ + + T+ + G D L G + + L
Sbjct: 1387 RNIEVVELWAGSGNDHFLGGL--GSDKVYGGAGADTLSGAAGHDTLI----GMEGDDLVL 1440
Query: 246 NTESWSSIGGYEKNMTIAQH---------------------------TVIESVVGSSGND 278
+ G N T++ E+++GS+ ND
Sbjct: 1441 GGAGDDDLHGVAGNDTVSYSDAAAGVTVSLAVNNARQMTGGAGSDFLIGFENLIGSAFND 1500
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ G+S +NV + +G D G G DT++ + E + + +
Sbjct: 1501 RLTGDSGDNVIYGGAGGDRMVGGLGNDTYYVDSAGDSVGENHLEGTDTIISSVSYSL-LG 1559
Query: 339 SDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
VE L + + +++ + L G D+ + G D
Sbjct: 1560 RAVEILTLTGAGNLAGIGNSLNNLMTGNSGNNTLEGAAGNDMLDGGAGSDRLLGGLGDDT 1619
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK------------EGRNPDAFKALEY 445
+ G ++ G+D ++ Y G L
Sbjct: 1620 YYVDNA--GDSVGENHLEGTDTIISSVSYSLFGRAVENFIMLGSANLSVTGNGLNNTLTG 1677
Query: 446 IASHEDLINAFADAPDLVQVGKDHF----SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
A + L + +G D + + E D+ +Y
Sbjct: 1678 NAGNNALDGGAGSDKMMGGLGDDTYYVDHAQDNVGEAHLQGTDTIYSSVTYSLFGRAVEI 1737
Query: 502 DRGAAARHYITHGVKEGRNPDAF---KALEYIASHEDLINAFADA--PDLVQAGKDHFSN 556
+ + G + L+ ++ L + +GKD ++
Sbjct: 1738 LTLTGSANLNGTGNSLANSLTGNAGGNRLDGAGGNDVLTGGLGADVFAFMTGSGKDTVTD 1797
Query: 557 FGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
F + +I + + + + FG D
Sbjct: 1798 FSAAQNDAINLTAYTHGVANAAIVSQFGGD 1827
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 71/509 (13%), Positives = 132/509 (25%), Gaps = 40/509 (7%)
Query: 91 TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD 150
+ + M D G + + + G +
Sbjct: 584 SIGWGDSSKMIFGLGGNDSLVGGSHTRGVYGGAGNDTLFNNASGPTVAEGGDGDDLIYGT 643
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
+ +V D+ G +D + G
Sbjct: 644 KRIYAGAGNDTVQMMETYDDNAAYGGDGNDDMKAAADWASTLYGDAGDDTLTGG---ARN 700
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLI-----------------------GGVKNYIDLNT 247
++ GG+D + + G + L+
Sbjct: 701 DHLYGGAGKDSMAGGGGNDRYGVDSVDDVVIEEANKGADEVYSSISYVLGANLEILSLDG 760
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G N + + + +GND V + + +GND +G +G DT
Sbjct: 761 SNDIDGTGNGLNNILVGNGANNRLDAGAGNDSVTAGAGADWVSGDAGNDTLEGGAGRDTV 820
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y S + A + D LS E L + + + +++ AS
Sbjct: 821 SYAGASGGVTVSLSLTASQATGGS--GSDKLSGFENLTGSAFADNLTGNEVGNVIIGGAS 878
Query: 368 YEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLY-LGSYDDLRNVFGSDRGAAAR 424
+ + + G D +++ + G D F S Y L + + GSD A
Sbjct: 879 NDTMSGLTGNDSYYVDAVSDAIVELANAGSDAVFSSVSYVLADNLEALTLTGSDHLEATG 938
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ G +A L A+ D + V G +EG
Sbjct: 939 ----NAAANGLTGNAGHNLLNGAAGNDTLAGQGGDDTYVVDGSGDVVTENVDEGTDT--- 991
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADA 543
+ L + G+ +G+ + AL+ A + L D
Sbjct: 992 VRASVNHNLGLHIESLTLTGSGNLSANGNGLANILTGNGGNNALDGGAGDDTLAGGLGDD 1051
Query: 544 PDLVQAGKDHFSNFGYEEGRSITFNPDLY 572
+V + D EG + Y
Sbjct: 1052 TYVVDSSSD-VIVENASEGTDVVLASQSY 1079
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 52/382 (13%), Positives = 104/382 (27%), Gaps = 31/382 (8%)
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L +NG PV +N S + + + V
Sbjct: 173 LGEGSGWNGSAPVVFGMGGDDNLSAGYYTAALYGGDGNDSVDGRNSQYLQRVEGGAGNDT 232
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL--------DLTLIGGVKNYIDL 245
+Y + +++ +T+ G+D + G + I
Sbjct: 233 LY---TNTNTSSVADGGDGDDLIYAHRTVLGGAGNDTILMVWSHYYADAAGGDGDDDIRA 289
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS--- 302
+ + G + T+ ++ + + G +GND V G + + GND G
Sbjct: 290 VDDLGVQLFGDAGHDTLTGSSITDVLDGGAGNDSVTGGAGQDWLTGGGGNDTLTGGDHPA 349
Query: 303 --GLDTFFYYAPSYLYKIYRFENAIIVY-----DANEHKQDFL-SDVERLRFADQC---- 350
D Y Y++ I+ + D L +E L+F++
Sbjct: 350 DLTGDVAVYSGGITDYQVTEDALTHIITVADLRTGSPDGADKLDRSIEALQFSEGTYLLD 409
Query: 351 -IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
I + + + + F + G D + D
Sbjct: 410 AILAGVGLGGVNFTGDDGADIYVGSEDGNTAIGNGGNDTFNGNGGPDTLIGNDG----AD 465
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
L D AA + + + + + + D + A A L D+
Sbjct: 466 QLNGGSSDDVLYAAAPFGVYKMPYYYDFIYIAPILDRDAAADTLTGGAGADLLSAGYGDN 525
Query: 470 FSNFGCEEGRFVTFDSYLYLGS 491
+ F++F + S
Sbjct: 526 VDGGADVDTLFISFQAATAGVS 547
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 39/306 (12%), Positives = 75/306 (24%), Gaps = 27/306 (8%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
++ N +S D+ G G +L
Sbjct: 1566 TLTGAGNLAGIGNSLNNLMTGNSGNNTLEGAAGNDMLDGGAGSDRLLGGLGDD------- 1618
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ G ++ D+ ++SV + G + +
Sbjct: 1619 ---TYYVDNAGDSVGENHLEGTDTIISSVSYSLFGRAVENFIMLGSANLSVTGN------ 1669
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS- 252
G GN + GDD + L
Sbjct: 1670 --GLNNTLTGN---AGNNALDGGAGSDKMMGGLGDDTYYVDHAQDNVGEAHLQGTDTIYS 1724
Query: 253 -----IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G + + + G+S + + GN+ N + GNDV G G D F
Sbjct: 1725 SVTYSLFGRAVEILTLTGSANLNGTGNSLANSLTGNAGGNRLDGAGGNDVLTGGLGADVF 1784
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ S + F A +++ + + +I +AS
Sbjct: 1785 AFMTGSGKDTVTDFSAAQNDAINLTAYTHGVANAAIVSQFGGDVVINLGGGNTITVLSAS 1844
Query: 368 YEDLIQ 373
D++
Sbjct: 1845 QTDVLS 1850
Score = 47.1 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 46/359 (12%), Positives = 95/359 (26%), Gaps = 38/359 (10%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
T + + ++ D +S I EL + S V+
Sbjct: 865 TGNEVGNVIIGGASNDTMSGLTGNDSYYVDAVSDAIVELANAGSDAV---FSSVSYVLAD 921
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
E ++ ++ N ++ + + D G T +
Sbjct: 922 NLEALTLTGSDHLEATGNAAANGLTGNAGHNLLNGAAGNDTLAGQGGDDTYVV------- 974
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
+G V + D D+ SV + + + + +
Sbjct: 975 ------------DGSGDVVTENVDEGTDTVRASVNHNLGLHIESLTLTGSGNLSANGNGL 1022
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ G T+ GDD + + I N
Sbjct: 1023 ANILTGNGGNNA------------LDGGAGDDTLAGGLGDDTYVVDSSS---DVIVENAS 1067
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ + ++ T+A H ++ G++ + GN+ N +SGN+V G +G DT +
Sbjct: 1068 EGTDVVLASQSYTLADHVENLTLTGTA-DLYGTGNAQGNTITGTSGNNVLIGGAGADTLY 1126
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A + + D + F+ L+Y+
Sbjct: 1127 GGAGNDSLVTNDGPGPTDSDVDYLYGGDGNDTLAYASFSQGQDVFDGGDGIDTLDYSDG 1185
Score = 43.6 bits (101), Expect = 0.094, Method: Composition-based stats.
Identities = 41/328 (12%), Positives = 81/328 (24%), Gaps = 27/328 (8%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N T + + + G GND + GN N+ + G DV G G D + A
Sbjct: 13 TYNGTPGNDTYSGTVNADDIHGLLGNDSLSGNGGNDTLEGNGGADVMSGGDGDDLLYASA 72
Query: 312 PSYLYKIYRFEN-----AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
P Y+ ++ ++ DA + + + +
Sbjct: 73 PPGAYQTPYYDAVPYVVPVLDRDAIADSLTGGAGDDVISAGYGDNVDGGDGTDFLFISFQ 132
Query: 367 SYED--------LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ Q IG ++++ SE D+ + G D
Sbjct: 133 GATSSVIFNLSLVSQTIGGGTIQNIEGARWIEGSEFGDVILGEGSGWNGSAPVVFGMGGD 192
Query: 419 RGAAARHYITHGVKEGRNPD--------------AFKALEYIASHEDLINAFADAPDLVQ 464
+A +Y N + A D +
Sbjct: 193 DNLSAGYYTAALYGGDGNDSVDGRNSQYLQRVEGGAGNDTLYTNTNTSSVADGGDGDDLI 252
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
+ + + Y + D + + + + G
Sbjct: 253 YAHRTVLGGAGNDTILMVWSHYYADAAGGDGDDDIRAVDDLGVQLFGDAGHDTLTGSSIT 312
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKD 552
L+ A ++ + G D
Sbjct: 313 DVLDGGAGNDSVTGGAGQDWLTGGGGND 340
>gi|329114937|ref|ZP_08243693.1| Hypothetical protein APO_1741 [Acetobacter pomorum DM001]
gi|326695834|gb|EGE47519.1| Hypothetical protein APO_1741 [Acetobacter pomorum DM001]
Length = 985
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 70/206 (33%), Gaps = 12/206 (5%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARH-YITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ Y Y D+ + Y G +P+ F Y+ + + A
Sbjct: 22 FDATWYAAKYGDVLKFLDLEGAEVLEEFYREKGPALRHSPNPYFDEDWYLRRYPAVAEAV 81
Query: 457 ADAPDLVQVGKDHFSNFGCEE-GRFVTFDSYLYLGSYDDLRNVFGSDRGAA--ARHYITH 513
+ G DH+ G FD Y + L+ + G HY+
Sbjct: 82 GKG--EWRSGFDHYCQTGFSSHNPHWLFDREFYFKQHPTLQPATLEEAGFRNLYDHYLNV 139
Query: 514 GVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLY 572
G ++ F A Y+ S I Q ++ GY + S F+P+ Y
Sbjct: 140 GDEQFLTGSWFFNATAYLKSGHARIEGLGA---FAQCVRNLRPEQGYGQRLSWYFDPEWY 196
Query: 573 LTSYDDLWNVFGSDR-SAAAQHYITH 597
L +Y + S R +A HY+++
Sbjct: 197 LETYPHVGKELASGRWLSALHHYLSN 222
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 57/300 (19%), Positives = 89/300 (29%), Gaps = 53/300 (17%)
Query: 349 QCIDSVNVKQRSILEYTASY-EDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYL 405
I +++ Y A Y + L + + + + E G + FD YL
Sbjct: 12 GNIKTIDWSVFDATWYAAKYGDVLKFLDLEGAEVLEEFYREKGPALRHSPNPYFDEDWYL 71
Query: 406 GSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
Y + G + HY G F Y H L A + +
Sbjct: 72 RRYPAVAEAVGKGEWRSGFDHYCQTGFSSHNPHWLFDREFYFKQHPTLQPATLEEA-GFR 130
Query: 465 VGKDHFSNFGCEEGRFVT------------------------------------------ 482
DH+ N G E+ +
Sbjct: 131 NLYDHYLNVGDEQFLTGSWFFNATAYLKSGHARIEGLGAFAQCVRNLRPEQGYGQRLSWY 190
Query: 483 FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD YL +Y + S R +A HY+++ NP+A F Y + + D+ A
Sbjct: 191 FDPEWYLETYPHVGKELASGRWLSALHHYLSNSTPTDYNPNAYFSEEFYGSVNHDVSGAV 250
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ +HF +G E R + + Y + V D A HYI HG
Sbjct: 251 ES--GNFRNFYEHFLRYGVHELRKPSANIDLESYYRNAVVQKEVTRGDFPDAFAHYIAHG 308
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 7/116 (6%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG--YEEGRSITFNPDLYLTSYDDLWN 581
F A Y A + D++ + + ++ + G + F+ D YL Y +
Sbjct: 22 FDATWYAAKYGDVLKFL--DLEGAEVLEEFYREKGPALRHSPNPYFDEDWYLRRYPAVAE 79
Query: 582 VFGSDR-SAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLS--FDH 634
G + HY G + +F + + + + +DH
Sbjct: 80 AVGKGEWRSGFDHYCQTGFSSHNPHWLFDREFYFKQHPTLQPATLEEAGFRNLYDH 135
>gi|258541335|ref|YP_003186768.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-01]
gi|256632413|dbj|BAH98388.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-01]
gi|256635470|dbj|BAI01439.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-03]
gi|256638525|dbj|BAI04487.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-07]
gi|256641579|dbj|BAI07534.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-22]
gi|256644634|dbj|BAI10582.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-26]
gi|256647689|dbj|BAI13630.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-32]
gi|256650742|dbj|BAI16676.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653733|dbj|BAI19660.1| glycosyl transferase [Acetobacter pasteurianus IFO 3283-12]
Length = 985
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 70/204 (34%), Gaps = 12/204 (5%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARH-YITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ Y Y D+ N G A Y G +P+ F Y+ + + NA
Sbjct: 22 FDATWYAEKYGDVLNFLGIAGTEALEEFYREKGPALRHSPNPYFDEDWYLQRYPAVANAV 81
Query: 457 ADAPDLVQVGKDHFSNFGCEE-GRFVTFDSYLYLGSYDDLRNVFGSDRGAA--ARHYITH 513
+ G DH+ G FD Y + +L+ + G HY+
Sbjct: 82 EKG--EWKSGFDHYCQTGFSSHNPHWLFDREFYFKQHPNLQPNVLEEAGFRNFYDHYLNV 139
Query: 514 GVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLY 572
G ++ F Y+ S + V + GY + S F+P+ Y
Sbjct: 140 GDEQFLTGSWFFNPTAYLKSGHARMEGLGAFAQCVSNVQP---EQGYGQRLSWYFDPEWY 196
Query: 573 LTSYDDLWNVFGSDR-SAAAQHYI 595
L +Y + S R +A HY+
Sbjct: 197 LQTYPHVRKEVDSGRWLSALHHYL 220
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 56/300 (18%), Positives = 88/300 (29%), Gaps = 53/300 (17%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIG-QDVFESMKHFYEFGLSEGRDIT--FDSYLYL 405
I ++ Y Y D++ +G + + E G + FD YL
Sbjct: 12 GHIKKIDWSVFDATWYAEKYGDVLNFLGIAGTEALEEFYREKGPALRHSPNPYFDEDWYL 71
Query: 406 GSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
Y + N + HY G F Y H +L + +
Sbjct: 72 QRYPAVANAVEKGEWKSGFDHYCQTGFSSHNPHWLFDREFYFKQHPNLQPNVLEEA-GFR 130
Query: 465 VGKDHFSNFGCEEGRFVT------------------------------------------ 482
DH+ N G E+ +
Sbjct: 131 NFYDHYLNVGDEQFLTGSWFFNPTAYLKSGHARMEGLGAFAQCVSNVQPEQGYGQRLSWY 190
Query: 483 FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD YL +Y +R S R +A HY+ + NP+A F Y + + D+ A
Sbjct: 191 FDPEWYLQTYPHVRKEVDSGRWLSALHHYLCNATPTDYNPNAYFSEEFYGSVNHDVSGAV 250
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ +HF +G E R + + Y + V D A HY+ HG
Sbjct: 251 ES--GNFRNFYEHFLRYGVHELRKPSANVDLESYYRNAVVQKEVSRGDFPDAFAHYLAHG 308
>gi|163739102|ref|ZP_02146514.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
gi|161387502|gb|EDQ11859.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
Length = 1725
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 58/187 (31%), Gaps = 7/187 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + TI GG+D + G + + ++ G + + + + +
Sbjct: 1479 NDTFSGTNYNDTINGGGGNDRIT----GDRGEDLLHGGKGVDTLRGGDGDDRLFLGSGND 1534
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
V +GND + G N++ G+D G G D + I + V+
Sbjct: 1535 RGVAGAGNDQMNGGGGNDMLHGGQGDDTLRGGQGADRVY--GGQGSDSIRAGQGNDTVFG 1592
Query: 330 ANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ + +++ + L + L +G D+
Sbjct: 1593 GSGADRVRGDLGNDQISLGIDDDRAFGGSGDDSLAGGDGEDTLNGGMGDDLLRGGAGRDT 1652
Query: 389 FGLSEGR 395
F + GR
Sbjct: 1653 FIFASGR 1659
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 50/215 (23%), Gaps = 28/215 (13%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + N T + +++ G GND + G+ ++ G D G G D F +
Sbjct: 1472 DVSAGDDNDTFSGTNYNDTINGGGGNDRITGDRGEDLLHGGKGVDTLRGGDGDDRLFLGS 1531
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ R +L + L
Sbjct: 1532 GND----------------------------RGVAGAGNDQMNGGGGNDMLHGGQGDDTL 1563
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D + +G D F DL N S R + G
Sbjct: 1564 RGGQGADRVYGGQGSDSIRAGQGNDTVFGGSGADRVRGDLGNDQISLGIDDDRAFGGSGD 1623
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
D L + L + G
Sbjct: 1624 DSLAGGDGEDTLNGGMGDDLLRGGAGRDTFIFASG 1658
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 4/114 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + +Y G D ++ G N + G N I+
Sbjct: 1559 GDDTLRGGQGADRVYGGQGSD----SIRAGQGNDTVFGGSGADRVRGDLGNDQISLGIDD 1614
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G SG+D + G + G+D+ G +G DTF + + +I F
Sbjct: 1615 DRAFGGSGDDSLAGGDGEDTLNGGMGDDLLRGGAGRDTFIFASGRGNDRISDFN 1668
>gi|238797765|ref|ZP_04641259.1| RTX toxin and Ca2+-binding protein [Yersinia mollaretii ATCC 43969]
gi|238718406|gb|EEQ10228.1| RTX toxin and Ca2+-binding protein [Yersinia mollaretii ATCC 43969]
Length = 475
Score = 77.5 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 57/196 (29%), Gaps = 12/196 (6%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D ++G ++ I I G I T + + G +G D + G N+
Sbjct: 131 DNIILGSNQDDIIYGHGGNDDINGGNGWDIIKAGTGDDFISGGNGGDHLFGGEGNDAING 190
Query: 292 SSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
G D G G D + + I + ++ N F D + L
Sbjct: 191 DDGADAIAGGMGADMIQGGNQKDYIEGNAGNDYISGDADNDFLFGGNNDDLIFGGDGDDL 250
Query: 345 RFADQCI-----DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
D + N L + +I G+D + + + S G
Sbjct: 251 IEGDGESYYPEPEHKNNIGSDHLWGNKGNDVIIPGKGKDFLDGGEGDDHYHFSFGDGANI 310
Query: 400 DSYLYLGSYDDLRNVF 415
+ + S + N
Sbjct: 311 INEISENSNAVIFNDH 326
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 61/200 (30%), Gaps = 24/200 (12%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V+GS+ +++++G++ +++ + GND +G +G D A + I ++
Sbjct: 125 VIGSNHDNIILGSNQDDIIYGHGGNDDINGGNGWDII--KAGTGDDFISGGNGGDHLFGG 182
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + D +++ + + G D
Sbjct: 183 EGND--------AINGDDGADAIAGGMGADMIQGGNQKDYIEGNAGNDYISGDADNDFLF 234
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
D+ F G DDL G + E +N L ++
Sbjct: 235 GGNNDDLIFG-----GDGDDLIEGDGESY---------YPEPEHKNNIGSDHLWGNKGND 280
Query: 451 DLINAFADAPDLVQVGKDHF 470
+I G DH+
Sbjct: 281 VIIPGKGKDFLDGGEGDDHY 300
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 36/224 (16%), Positives = 64/224 (28%), Gaps = 36/224 (16%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
++ ++ + Q I+ +D+ G D+ ++ G D F
Sbjct: 124 KVIGSNHDNIILGSNQDDIIYGHGGNDDINGGNGWDIIKAGTGDDFISGGNGGDHLFG-- 181
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
G +D + G D A + + +G N D I A +
Sbjct: 182 ---GEGND--AINGDDGADAIAGGMGADMIQGGNQK------------DYIEGNAGNDYI 224
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
+ F G D ++ G DDL G H G
Sbjct: 225 SGDADNDFLFGGNN-------DDLIFGGDGDDLIEGDGESYYPEPEHKNNIGS------- 270
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
L ++ +I G DH+ +F + +G +I
Sbjct: 271 --DHLWGNKGNDVIIPGKGKDFLDGGEGDDHY-HFSFGDGANII 311
>gi|218531909|ref|YP_002422725.1| glycosyl transferase family 2 [Methylobacterium chloromethanicum
CM4]
gi|218524212|gb|ACK84797.1| glycosyl transferase family 2 [Methylobacterium chloromethanicum
CM4]
Length = 1317
Score = 77.5 bits (189), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 24/143 (16%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL SY D+ H++ HG E RNP+A F + Y ++E + +A
Sbjct: 189 FDESYYLISYPDVAQS----EMPPLEHFLKHGGPELRNPNAHFDSRWYAETNEAACSGYA 244
Query: 542 DAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+H+ G EGR + F+ Y+ ++ + +HY+T G
Sbjct: 245 IP-------LEHYIERGTLEGRDPNPNFDTAFYVDNHPEARKA-------PLRHYLTVGQ 290
Query: 600 KEGRALGISGMQFKSVMNLSEKS 622
A F + + + +
Sbjct: 291 H---AATKPAPNFDAYLPSGKTA 310
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 47/141 (33%), Gaps = 28/141 (19%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
D F Y+ S+ D+ +HF G E R FDS Y + +
Sbjct: 187 DLFDESYYLISYPDVAQ-------SEMPPLEHFLKHGGPELRNPNAHFDSRWYAETNE-- 237
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
G HYI G EGR+P+ F Y+ +H + +A H+
Sbjct: 238 AACSGYAI--PLEHYIERGTLEGRDPNPNFDTAFYVDNHPE----------ARKAPLRHY 285
Query: 555 SNFGYEEG--RSITFNPDLYL 573
G + F+ YL
Sbjct: 286 LTVGQHAATKPAPNFDA--YL 304
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 13/89 (14%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
D F Y+ S+ D+ + +HF G E R+ F+ Y + +
Sbjct: 187 DLFDESYYLISYPDVAQSE-------MPPLEHFLKHGGPELRNPNAHFDSRWYAETNE-- 237
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRALGIS 608
S + +HYI G EGR +
Sbjct: 238 --AACSGYAIPLEHYIERGTLEGRDPNPN 264
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 49/151 (32%), Gaps = 21/151 (13%)
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDD 410
Y SY D+ Q ++HF + G E R+ FDS Y + +
Sbjct: 183 DQIADLFDESYYLISYPDVAQS----EMPPLEHFLKHGGPELRNPNAHFDSRWYAETNEA 238
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ + HYI G EGR+P+ + D + P+ + H+
Sbjct: 239 ACSGYAI----PLEHYIERGTLEGRDPN---------PNFDTAFYVDNHPEARKAPLRHY 285
Query: 471 SNFGC--EEGRFVTFDSYLYLGSYDDLRNVF 499
G FD+YL G +
Sbjct: 286 LTVGQHAATKPAPNFDAYLPSGKTAPVIPTG 316
>gi|300797815|ref|NP_001179551.1| matrix metalloproteinase-16 [Bos taurus]
gi|297482541|ref|XP_002692871.1| PREDICTED: matrix metallopeptidase 16 (membrane-inserted) [Bos
taurus]
gi|296480445|gb|DAA22560.1| matrix metallopeptidase 16 (membrane-inserted) [Bos taurus]
Length = 607
Score = 77.5 bits (189), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 60/205 (29%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F + D+ +QKIYG P
Sbjct: 276 --FKLPS----DDLQGIQKIYGPPD 294
>gi|170747634|ref|YP_001753894.1| glycosyl transferase family protein [Methylobacterium radiotolerans
JCM 2831]
gi|170654156|gb|ACB23211.1| glycosyl transferase family 2 [Methylobacterium radiotolerans JCM
2831]
Length = 1322
Score = 77.5 bits (189), Expect = 8e-12, Method: Composition-based stats.
Identities = 44/224 (19%), Positives = 64/224 (28%), Gaps = 30/224 (13%)
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD 458
D YL DL HY+ G +EGR P F L Y + A +
Sbjct: 144 DGAFYLAGNPDLAAA----GVDPVDHYMASGWREGREPAPQFDTLAY-CLTRGITFATQN 198
Query: 459 APDLV------QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD--LRNVFGSDRGAAARHY 510
+ + E FD+ Y + + G+ A RHY
Sbjct: 199 PLVHYVLHGGSARPDPNAALALRIETLAPYFDAAHYRQRLPEPQAEALAGASDAALLRHY 258
Query: 511 ITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE------EGR 563
+ G + P F Y+ + A AD P + G E
Sbjct: 259 VAEGWRARIGPRPDFDPAGYVQARSG-SRAVADDPFFRYVAET--RLSGGEPFAAPHRLN 315
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
+ D Y +Y D+ H+ G +E R G
Sbjct: 316 LPAVDADWYRATYPDV------GGREPFLHFAEAGWRELRDPGP 353
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 52/182 (28%), Gaps = 43/182 (23%)
Query: 420 GAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
R Y+ HG + GR+P F + Y+A H + A + + + E
Sbjct: 66 ADPVRDYLVHGWRAGRDPRPDFDSAAYLARHSHIARAGINPLLHALARRRGGAGGEGEAA 125
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
D A H + R Y+A + DL
Sbjct: 126 ALPRPD--------------------TAEAH------RLARRLV--DGAFYLAGNPDLAA 157
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
A P DH+ G+ EGR F+ Y L HY+
Sbjct: 158 A-GVDP------VDHYMASGWREGREPAPQFDTLAYC-----LTRGITFATQNPLVHYVL 205
Query: 597 HG 598
HG
Sbjct: 206 HG 207
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 56/188 (29%), Gaps = 41/188 (21%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHE------- 450
FD Y Y S+ A R Y G K GRNP F Y A H
Sbjct: 405 FDHGFYRARYGL------SEAEDAVRDYCDTGWKTGRNPRPDFNGWAYRAHHPSAEATGL 458
Query: 451 ---------------DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
DL D ++ F FD+ Y+ Y D
Sbjct: 459 APFVHHLARALLRGDDLAGDAFDPRYGAPPAEEDAELFEQARLIEPLFDAPWYVKRYPDT 518
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
G H+++HG +E R+P F Y ++ L+ ++ H+
Sbjct: 519 ----GGFENGPVIHFLSHGQEEDRDPSKTFSTRFYRRAYGHLLG-------PGESPFLHY 567
Query: 555 SNFGYEEG 562
G G
Sbjct: 568 VRTGRAAG 575
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 75/242 (30%), Gaps = 51/242 (21%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLI 453
D+ Y +Y D+ H+ G +E R+P L + L
Sbjct: 315 NLPAVDADWYRATYPDV------GGREPFLHFAEAGWRELRDPGPGRSTLAALLRVCGLR 368
Query: 454 NAFADAPDLVQVGKDHFSNFGCE-----EGRFVT--FDSYLYLGSYDDLRNVFGSDRGAA 506
A A D +G + + R V FD Y Y S+ A
Sbjct: 369 PARAPVEDTGWLGAIGRETLDRDALLDLQARLVAGHFDHGFYRARYG------LSEAEDA 422
Query: 507 ARHYITHGVKEGRNPD-AFKALEYIASHED------------LINAFADAPDLVQAGKDH 553
R Y G K GRNP F Y A H L A DL D
Sbjct: 423 VRDYCDTGWKTGRNPRPDFNGWAYRAHHPSAEATGLAPFVHHLARALLRGDDLAGDAFD- 481
Query: 554 FSNFG----------YEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
+G +E+ R I F+ Y+ Y D G + H+++HG +E
Sbjct: 482 -PRYGAPPAEEDAELFEQARLIEPLFDAPWYVKRYPDT----GGFENGPVIHFLSHGQEE 536
Query: 602 GR 603
R
Sbjct: 537 DR 538
>gi|300250958|gb|ADJ95797.1| MMP11 protein precursor [Canis lupus familiaris]
Length = 445
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 64/199 (32%), Gaps = 52/199 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 57 LSGGRWDKTDLTYRILRFPWQLVREQV-------RQTVAEALQVWSEVTPLTFTEVHEGR 109
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G +GT L
Sbjct: 110 ADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGNNQGTDLL 167
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H + ++MS +F Y
Sbjct: 168 QVAAHEFGHTLGLQHT-------------------TAAKALMS--------PFYTFRYPL 200
Query: 182 TPMVSDIVAVQKIYGAPKG 200
+ D +Q +YG P+
Sbjct: 201 SLSPDDRRGIQHLYGQPRT 219
>gi|188581427|ref|YP_001924872.1| glycosyl transferase family 2 [Methylobacterium populi BJ001]
gi|179344925|gb|ACB80337.1| glycosyl transferase family 2 [Methylobacterium populi BJ001]
Length = 995
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 73/246 (29%), Gaps = 52/246 (21%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIAS------ 448
FD Y +Y D+ G HY+ HG EGR+P A F L YI
Sbjct: 13 SPFFDPAFYRDAYPDVAAGGGD----PLVHYLDHGWLEGRDPSAVFSTLFYIDRHLADRA 68
Query: 449 --HEDLINAFADAPDLVQVGKDHFSNF--GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ L A + ++V +F FD+ Y R
Sbjct: 69 PVNPLLHYAGLSPAERLRVATQPGPDFPVLQAAIAEPFFDAPFYA------RLAGLEGGE 122
Query: 505 AAARHYITHGVKEGRNPDA-FKALEYIASHED--------LINAFADAPDLVQAGKDHFS 555
HY+T G + G +P+ F Y+ H L + A +
Sbjct: 123 DPLSHYLTKGWRRGLDPNDAFSGDAYLQRHAHMRRLGVSPLYHFAATRRLQATEAAGTPA 182
Query: 556 NFGYEEGRSI------------------TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
+ + F+ + YL + D+ +H++
Sbjct: 183 RRAKSQAAPLPADPAEASDAQIYETVAAAFDREHYLETNPDIRR----SGVDPVRHFLDF 238
Query: 598 GMKEGR 603
G +E R
Sbjct: 239 GAREDR 244
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 45/164 (27%), Gaps = 35/164 (21%)
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHE 534
FD Y +Y D+ G HY+ HG EGR+P A F L YI H
Sbjct: 9 AATASPFFDPAFYRDAYPDVAAGGGD----PLVHYLDHGWLEGRDPSAVFSTLFYIDRH- 63
Query: 535 DLINAFADAPDLVQAGKD---------------HFSNFGYEEGRSITFNPDLYLTSYDDL 579
L + P L AG E F+ Y
Sbjct: 64 -LADRAPVNPLLHYAGLSPAERLRVATQPGPDFPVLQAAIAE---PFFDAPFYA------ 113
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
HY+T G + G + S ++
Sbjct: 114 RLAGLEGGEDPLSHYLTKGWRRG----LDPNDAFSGDAYLQRHA 153
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 43/174 (24%), Gaps = 43/174 (24%)
Query: 383 MKHFYEFGLSEGRDIT--FDSYLYLGSYD---------------------DLRNVFGSDR 419
+ H+ G G D F YL + + R
Sbjct: 125 LSHYLTKGWRRGLDPNDAFSGDAYLQRHAHMRRLGVSPLYHFAATRRLQATEAAGTPARR 184
Query: 420 GAAARHYITHGVKEGRNPDA-------FKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ + E + F Y+ ++ D+ + D HF +
Sbjct: 185 AKSQAAPLPADPAEASDAQIYETVAAAFDREHYLETNPDIRRSGVDPVR-------HFLD 237
Query: 473 FGCEEGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
FG E R F Y Y + HY+ G G P F
Sbjct: 238 FGAREDRDPSPDFSVRFYRKHYRREVGPGVN----PFFHYLVVGRARGFRPTPF 287
>gi|163853098|ref|YP_001641141.1| lipopolysaccharide biosynthesis protein-like protein
[Methylobacterium extorquens PA1]
gi|163664703|gb|ABY32070.1| Lipopolysaccharide biosynthesis protein-like protein
[Methylobacterium extorquens PA1]
Length = 916
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/223 (18%), Positives = 59/223 (26%), Gaps = 54/223 (24%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRN 497
F Y+ + D+ + + H+ G EGR FD+ Y Y
Sbjct: 37 FDVKFYLQENPDVGASNQNPIL-------HYLEHGSREGRRPNLDFDTQFYKQKY---VA 86
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA----------------------FKALEYIASHED 535
G YI G +G F Y+ + D
Sbjct: 87 EIGDTEPFLY--YIMSGKGKGHATSDGSPYVSYRARKDFPDYQLVAEEFDTEYYLNENRD 144
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRS--ITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
+ D H+ G EGR FNP Y Y H
Sbjct: 145 IH-------DSKVDPISHYLQHGEREGRRPIPDFNPTFYAQEYSSEI-----GEMGPFIH 192
Query: 594 YITHGMKEG----RALGISGMQFKSVMNLSEKSRDKADLSLSF 632
YI +G K+G R Q + R + + +F
Sbjct: 193 YIRYGRKKGYKGAREEYYYSNQLVYPNGVVPSRRPRNENDYAF 235
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 55/183 (30%), Gaps = 42/183 (22%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 539
FD YL D+ G+ HY+ HG +EGR P+ F Y + +
Sbjct: 35 PYFDVKFYLQENPDV----GASNQNPILHYLEHGSREGRRPNLDFDTQFYKQKY---VAE 87
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSIT-----------------------FNPDLYLTSY 576
D ++ G +G + + F+ + YL
Sbjct: 88 IGD-----TEPFLYYIMSGKGKGHATSDGSPYVSYRARKDFPDYQLVAEEFDTEYYLNEN 142
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGI--SGMQFKSVMNLSEKSRDKADLSLSFDH 634
D+ + HY+ HG +EGR + + + + +
Sbjct: 143 RDIHDSKVD----PISHYLQHGEREGRRPIPDFNPTFYAQEYSSEIGEMGPFIHYIRYGR 198
Query: 635 KKV 637
KK
Sbjct: 199 KKG 201
Score = 68.3 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 62/185 (33%), Gaps = 37/185 (20%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 455
FD YL D+ G+ HY+ HG +EGR P+ F Y + +
Sbjct: 35 PYFDVKFYLQENPDV----GASNQNPILHYLEHGSREGRRPNLDFDTQFYKQKY--VAEI 88
Query: 456 FADAPDLV----QVGKDHFSNFGC------EEGRFVT-------FDSYLYLGSYDDLRNV 498
P L GK H ++ G F FD+ YL D+ +
Sbjct: 89 GDTEPFLYYIMSGKGKGHATSDGSPYVSYRARKDFPDYQLVAEEFDTEYYLNENRDIHDS 148
Query: 499 FGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+ HY+ HG +EGR P F Y + I H+ +
Sbjct: 149 ----KVDPISHYLQHGEREGRRPIPDFNPTFYAQEYSSEIGEMG--------PFIHYIRY 196
Query: 558 GYEEG 562
G ++G
Sbjct: 197 GRKKG 201
>gi|4191265|emb|CAA09055.1| MT5-MMP protein [Mus musculus]
Length = 614
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 63/213 (29%), Gaps = 59/213 (27%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 127 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 179
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 180 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 237
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + + + N
Sbjct: 238 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN----------------- 280
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
F D+ +QKIYG P G
Sbjct: 281 ----FKLPQ----DDLQGIQKIYGPPAEPSGAT 305
>gi|40254544|ref|NP_062698.2| matrix metalloproteinase-16 precursor [Mus musculus]
gi|34785576|gb|AAH57926.1| Matrix metallopeptidase 16 [Mus musculus]
gi|122889875|emb|CAM13981.1| matrix metalloproteinase 16 [Mus musculus]
gi|123229799|emb|CAM18851.1| matrix metalloproteinase 16 [Mus musculus]
gi|148673638|gb|EDL05585.1| matrix metallopeptidase 16, isoform CRA_a [Mus musculus]
gi|148673640|gb|EDL05587.1| matrix metallopeptidase 16, isoform CRA_a [Mus musculus]
Length = 607
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 58/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P + R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRRAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|149925493|ref|ZP_01913757.1| hypothetical protein LMED105_04697 [Limnobacter sp. MED105]
gi|149825610|gb|EDM84818.1| hypothetical protein LMED105_04697 [Limnobacter sp. MED105]
Length = 940
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 63/173 (36%), Gaps = 13/173 (7%)
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSD 502
S + AF DA + + + + RF FD Y + D+
Sbjct: 633 ASTSTNSVNKAFNDAGNAFKKLGKKKKHKPAPDPRFAASVFDWDFYYDNNQDVVKA---- 688
Query: 503 RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
+ A H+ G ++GR F A Y + D+ H+ ++G E+
Sbjct: 689 KVDLATHWADDGFEKGRQGSPEFGASFYWHRYTDVQKLCK--LGDRLCVTRHWLDYGIEQ 746
Query: 562 GR--SITFNPDLYLTSYDDLWNVFG-SDRSAAAQHYITHGMK-EGRALGISGM 610
GR S F+ Y+ Y DL FG + A H+ +G + EGR +
Sbjct: 747 GRQGSPNFSLYSYMARYSDLRRAFGEENYETAITHWFDNGEELEGRNASPTSS 799
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 42/130 (32%), Gaps = 4/130 (3%)
Query: 378 DVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVK-E 433
D +H+ ++G+ +GR F Y Y+ Y DLR FG + A H+ +G + E
Sbjct: 731 DRLCVTRHWLDYGIEQGRQGSPNFSLYSYMARYSDLRRAFGEENYETAITHWFDNGEELE 790
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
GRN + + S + G G D +
Sbjct: 791 GRNASPTSSDKVEVSGPARAGGGGGGFWSDMATCKNEYVTGFRIGAGRVVDRVQFRYPGG 850
Query: 494 DLRNVFGSDR 503
G D
Sbjct: 851 WAPRQGGGDT 860
>gi|329850369|ref|ZP_08265214.1| hemolysin/adenylate cyclase [Asticcacaulis biprosthecum C19]
gi|328840684|gb|EGF90255.1| hemolysin/adenylate cyclase [Asticcacaulis biprosthecum C19]
Length = 752
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 59/397 (14%), Positives = 104/397 (26%), Gaps = 23/397 (5%)
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSN---NGYVCTPRYDSRYFMEINFDK 106
Q+ G S + + + F + N S +
Sbjct: 338 AGQDSFTLWYGGLSDDFLIDVSQAHTSAGSIFSTGTVIRNAEFFKIYTGSGDDTLVGTAH 397
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
DV G G +I + I LG G ++ D L
Sbjct: 398 DDVIETGSGDDSITGGDGNDSITGGLGYDFIDGGAGNDTIWVAQPDISEGDTLY------ 451
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
D ++ IYG + D
Sbjct: 452 -GGDGNDALYGTRTGDDVLMGGAGNDSIYGHFGNDTVSYADATAGVTVDLNLATQATGGS 510
Query: 227 GDDLLDLT-----------LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
G D LD L+G + + ++ G + TI+ +++ G +
Sbjct: 511 GTDWLDDIENLIGSELNDNLLGDGADGVMQGLGGNDTVAGSSGHDTISGDDGNDNLSGGT 570
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GNDV++ +++ +G+D DG GLDT Y + +
Sbjct: 571 GNDVLMAGDGDDLIQAGAGDDSIDGGLGLDTMSYSTATAAVTVDLALAVSQATGG--AGS 628
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D L +E L + + L+ A + L G+D+ F G
Sbjct: 629 DMLQAIEGLIGSGHNDTLSGDGGDNNLDGRAGNDILNGGAGKDILSGKAGLDIFLFGIGS 688
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+ + D + + A+ G
Sbjct: 689 GLDVINDFSATDGDLINVNAYTGGVASPGAVTQTGSS 725
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 28/187 (14%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG + L G ++ +++ G G D + GN N+ + ND
Sbjct: 169 GGSGSDTFLGGGGNDLATGGSGETYLSGGAGNDTLSGGGGVDRLSGNEGNDSITGGTHND 228
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G G DT F + +RL +D +
Sbjct: 229 FLHGDWGNDTLFGN----------------------------TGNDRLEGSDGDDLLNDT 260
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+IL+ + + + G D + G D +D +D + G
Sbjct: 261 SGANILQGHSGNDTITAGNGNDSIWGNAGADLIEAAGGNDTIYDDDSVSTRGNDTISAGG 320
Query: 417 SDRGAAA 423
D +
Sbjct: 321 GDDIVSL 327
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 63/496 (12%), Positives = 116/496 (23%), Gaps = 26/496 (5%)
Query: 66 VDLTFEE-TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
+ F E ++ + ++ T I + + G+G T + +
Sbjct: 113 AGIDFVEYVQTYATVSYLFDVTAMATTTGVTLADGTIIRNVERAHFDAGLGNDTFIGGSG 172
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
LG GG + ND+ + + D+ G
Sbjct: 173 SDTF---LGGGGNDLATGGSGETYLSGGAGNDTLSGGGGVDRLSGNEGNDSITGGTHNDF 229
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+ ++G G+ + D+ + G+D + G N
Sbjct: 230 LHGDWGNDTLFG-NTGNDRLEGSDGDDLLNDTSGANILQGHSGNDTIT----AGNGNDSI 284
Query: 245 LNTESWSSIGGYEKNMTIAQH-----TVIESVVGSSGNDVVIGNSANNVFFESSGNDVF- 298
I N TI +++ G+D+V + +G D F
Sbjct: 285 WGNAGADLIEAAGGNDTIYDDDSVSTRGNDTISAGGGDDIVSLWGGADAIDAGAGQDSFT 344
Query: 299 --DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G D + ++ F ++ +A K S + L
Sbjct: 345 LWYGGLSDDFLIDVSQAHTSAGSIFSTGTVIRNAEFFKIYTGSGDDTLVGTAHDDVIETG 404
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ + + +G D + +++ D+ D L
Sbjct: 405 SGDDSITGGDGNDSITGGLGYDFIDGGAGNDTIWVAQPDISEGDTLYGGDGNDALYGTRT 464
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
D N A DL A D N
Sbjct: 465 GDDVLMGGAGNDSIYGHFGNDTVSYADATAGVTVDLNLATQATGGSGTDWLDDIENLIGS 524
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
E D + G + G D L ++ L
Sbjct: 525 ELNDNLL---------GDGADGVMQGLGGNDTVAGSSGHDTISGDDGNDNLSGGTGNDVL 575
Query: 537 INAFADAPDLVQAGKD 552
+ D AG D
Sbjct: 576 MAGDGDDLIQAGAGDD 591
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 77/292 (26%), Gaps = 29/292 (9%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS-----ANNVFFE 291
GG+ I T + + G N ++ + + G+ GND ++G N+
Sbjct: 34 GGINQAIYYGTIANDTYVGTSDNDQADGNSGDDYLDGAGGNDFLVGERYWELVGNDTLIG 93
Query: 292 SSGN---------DVFDGSSGLDTFFYYAPSYLYK-IYRFENAIIVYDANEHKQDFLSDV 341
GN DV DG +G+D Y ++ + +V
Sbjct: 94 GDGNDNLSSLGGIDVLDGGAGIDFVEYVQTYATVSYLFDVTAMATTTGVTLADGTIIRNV 153
Query: 342 ERLRFADQCIDSV-----------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
ER F + + + L G D
Sbjct: 154 ERAHFDAGLGNDTFIGGSGSDTFLGGGGNDLATGGSGETYLSGGAGNDTLSGGGGVDRLS 213
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
+EG D + D N R + G + L+ + ++
Sbjct: 214 GNEGNDSITGGTHNDFLHGDWGNDTLFGNTGNDRLEGSDGDDLLNDTSGANILQGHSGND 273
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ + G D G G +D +D + G D
Sbjct: 274 TITAGNGNDSIWGNAGADLIEAAG---GNDTIYDDDSVSTRGNDTISAGGGD 322
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 86/298 (28%), Gaps = 9/298 (3%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+G + + + D G T+ +A + L L + G
Sbjct: 452 GGDGNDALYGTRTGDDVLMGGAGNDSIYGHFGNDTVSYADATAGVTVDLNLATQATGGSG 511
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ +++ A D ++ G G
Sbjct: 512 TDWLDDIENLIGSELNDNLLGDGADGVMQGLGGNDTVAGSSGHDTISGDDGNDNLSGGTG 571
Query: 204 NNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
N++ + + +I G D + + +DL + GG +M
Sbjct: 572 NDVLMAGDGDDLIQAGAGDDSIDGGLGLDTMSYSTATAAV-TVDLALAVSQATGGAGSDM 630
Query: 261 -----TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ +++ G G++ + G + N++ +G D+ G +GLD F + S L
Sbjct: 631 LQAIEGLIGSGHNDTLSGDGGDNNLDGRAGNDILNGGAGKDILSGKAGLDIFLFGIGSGL 690
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
I F ++ + + +I + AS D++
Sbjct: 691 DVINDFSATDGDLINVNAYTGGVASPGAVTQTGSSVTIDLGGGNAITVFNASQADVLS 748
>gi|158335376|ref|YP_001516548.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158305617|gb|ABW27234.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
Length = 1296
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 64/497 (12%), Positives = 106/497 (21%), Gaps = 28/497 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ D + G G T+L + I G
Sbjct: 140 SGDQGNDSLYGGENEDYANGGQGNDLVDGGSGHDHIKGGSGNDTLLGQDGHDIIDGEGGH 199
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G ++ +
Sbjct: 200 DELIGGAGNDYWVSGGAGNDSLYGEAGEDYLTGGTGNDYIEGGAGNDNLSGDQGHDTLFA 259
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL---------------DLTLIGGV 239
+ G I G+D L D + G
Sbjct: 260 GEGEDYAEGGT---GNDLVDGGAGHDHIKGGSGNDTLLGQDGHDIIEGEAGHDELIGGAG 316
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+Y S+ G N + + + G + ND + GN ++ G D +
Sbjct: 317 DDYFVSGGTGNDSLYGEAGNDFLTGGKGRDYIEGGADNDNLQGNQGHDTLLGGDGEDYAE 376
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD----VERLRFADQCIDSVN 355
G SG D + I + + D L E + +
Sbjct: 377 GGSGRDLV--DGGAGHDHIKGGSGNDTLL--GQDGHDILEGEAGHDELIGGSGDDYWVSG 432
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
L A + L G+D E EG+D + + +
Sbjct: 433 GTGNDSLYGEAGDDVLSGGKGRDYLEGGIGNDALFGDEGKDTLYAGEGEDYAEGGKGSDL 492
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
G + LE A H+ LI D + +
Sbjct: 493 IDGGAGHDVLKGGTGNDTLLGQEGADVLEGEAGHDKLIGGAGDDYWVSGGTGNDSLYGEA 552
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
Y+ D +FG + Y G ++ A H+
Sbjct: 553 GHDVLSGGKGRDYIEGGLDNDALFGDEGRDTL--YAGEGDDYAEGGAGRDLVDGGAGHDV 610
Query: 536 LINAFADAPDLVQAGKD 552
L + L Q G D
Sbjct: 611 LKGGTGNDTLLGQDGND 627
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/364 (11%), Positives = 88/364 (24%), Gaps = 11/364 (3%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
G + DV G G+ I + G + +G
Sbjct: 640 GGAGSDGWISGGTGNDSLYGEAGDDVLSGGKGRDYIEGGIGNDALFGNEGKDTLLAGDGE 699
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
G D + + + G + + G G
Sbjct: 700 DYAEGGKGSDLIDGGAGHDVLKGGTGNDTLLGQDGADVLEGEAGHDKLIGGAGDDYWVSG 759
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ G D + + L G E G
Sbjct: 760 GT---GNDSLYGEVGHDVLSGGRGRDYIEGGLDNDALFGDEGRDTLYAGEGDDYAEGGAG 816
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + G +GND ++G +++ +G+D G +G D ++ + +
Sbjct: 817 RDLVDGGAGHDVLKGGTGNDTLLGQDGHDILEGEAGHDKLIGGAGDD-YWVSGGTGNDSL 875
Query: 319 YRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
Y ++ + + + + + I+ + L G
Sbjct: 876 YGEAGHDVLSGDEGRDLIYGGTGNDVVLGGAGRDRLYGGEGEDIIVGNEGADRLYGDAGH 935
Query: 378 DVFESMKHFYEFGLSEGRD-ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D+ G D I + + + + N D R++ G EG
Sbjct: 936 DILNGGAGNDTIYGGTGNDIIDGGAEDVIAPRNLVANGSFEDNQLGNRNWGVFGSVEGWT 995
Query: 437 PDAF 440
Sbjct: 996 TTQG 999
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/500 (13%), Positives = 118/500 (23%), Gaps = 35/500 (7%)
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
+ G+ + D G + + +G
Sbjct: 409 DILEGEAGHDELIGGSGDDYWVSGGTGNDSLYGEAGDDVLSGGKGRDYLEGGIGNDALFG 468
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
G +Y + + + S + ++ G ++ G K
Sbjct: 469 DEGKDTLYAGEGEDYAEGGKGSDLIDGGAGHDVLKGGTGNDTLLGQEGADVLEGEAGHDK 528
Query: 200 --GSLGNNIY----KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTE 248
G G++ + + G D + + L G E
Sbjct: 529 LIGGAGDDYWVSGGTGNDSLYGEAGHDVLSGGKGRDYIEGGLDNDALFGDEGRDTLYAGE 588
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
G + + + G +GND ++G N+V +G+D G +G D +
Sbjct: 589 GDDYAEGGAGRDLVDGGAGHDVLKGGTGNDTLLGQDGNDVLEGGAGHDELIGGAGSDGWI 648
Query: 309 YYAPSYLYKIYRFENAIIVYDA-------NEHKQDFLSDVE---RLRFADQCIDSVNVKQ 358
+ +Y ++ D L E L D + K
Sbjct: 649 -SGGTGNDSLYGEAGDDVLSGGKGRDYIEGGIGNDALFGNEGKDTLLAGDGEDYAEGGKG 707
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+++ A ++ L G D G D L G+ DD G+
Sbjct: 708 SDLIDGGAGHDVLKGGTGNDTLLGQDGADVLEGEAGHD-----KLIGGAGDDYWVSGGTG 762
Query: 419 RGAAARHYITHGVKEGR------NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ + GR AL + L D G+D
Sbjct: 763 NDSLYGEVGHDVLSGGRGRDYIEGGLDNDALFGDEGRDTLYAGEGDDYAEGGAGRDLVDG 822
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
+ + LG + G +L A
Sbjct: 823 GAGHDVLKGGTGNDTLLGQDGHDILEGEAGHDKLIGGAGDDYWVSG--GTGNDSLYGEAG 880
Query: 533 HEDLINAFADAPDLVQAGKD 552
H+ L G D
Sbjct: 881 HDVLSGDEGRDLIYGGTGND 900
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/349 (15%), Positives = 94/349 (26%), Gaps = 33/349 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ S TI G+D L +G + L E G + N + +
Sbjct: 9 DDFLVGSLEDDTILGDLGNDNL----VGDKGDDTLLAGEGEDYAEGGQGNDFVDGGANHD 64
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G SG+D ++G ++V +GND G +G D Y+ +
Sbjct: 65 HLKGGSGHDTLLGQDGHDVLEGGNGNDKLVGGAGDD---YWMSGGAGNDSLYGEGQNDVM 121
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ D+LS + + L + + G D+ +
Sbjct: 122 SGGAGHDYLSG------GTGNDNLSGDQGNDSLYGGENEDYANGGQGNDLVDGGSGHDHI 175
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G D D+ + G + V G +L A
Sbjct: 176 KGGSGNDTLLGQ-----DGHDIIDGEGGHDELIGGAGNDYWVSGG---AGNDSLYGEAGE 227
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ L + G D+ S + F G + G+
Sbjct: 228 DYLTGGTGNDYIEGGAGNDNLSGDQGHDTLFAGEGEDYAEGGTGNDLVDGGA-------- 279
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
G + L H+ + + AG D+F + G
Sbjct: 280 ----GHDHIKGGSGNDTLLGQDGHDIIEGEAGHDELIGGAGDDYFVSGG 324
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/361 (13%), Positives = 94/361 (26%), Gaps = 21/361 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + GDD L + G + + G + + + +
Sbjct: 18 DDTILGDLGNDNLVGDKGDDTL----LAGEGEDYAEGGQGNDFVDGGANHDHLKGGSGHD 73
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGND-VFDGSSGLDTFFYYA-----PSYLYKIYRFEN 323
+++G G+DV+ G + N+ +G+D G +G D+ + Y
Sbjct: 74 TLLGQDGHDVLEGGNGNDKLVGGAGDDYWMSGGAGNDSLYGEGQNDVMSGGAGHDYLSGG 133
Query: 324 AIIVYDANEHKQDFLSDVERLRFAD---QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + D L E +A+ ++ + + L+ G D+
Sbjct: 134 TGNDNLSGDQGNDSLYGGENEDYANGGQGNDLVDGGSGHDHIKGGSGNDTLLGQDGHDII 193
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGS-YDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ E G D S Y + + + G
Sbjct: 194 DGEGGHDELIGGAGNDYWVSGGAGNDSLYGEAGEDYLTGGTGNDYIEGGAGNDNLSGDQG 253
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRN 497
L + + G DH + D +D+L
Sbjct: 254 HDTLFAGEGEDYAEGGTGNDLVDGGAGHDHIKGGSGNDTLLGQDGHDIIEGEAGHDELIG 313
Query: 498 VFGSD-----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G D Y G +E A +++L L G+D
Sbjct: 314 GAGDDYFVSGGTGNDSLYGEAGNDFLTGGKGRDYIEGGADNDNLQGNQGHDTLLGGDGED 373
Query: 553 H 553
+
Sbjct: 374 Y 374
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 70/487 (14%), Positives = 124/487 (25%), Gaps = 40/487 (8%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ DV + G G T+L + + G H G Y V
Sbjct: 700 DYAEGGKGSDLIDGGAGHDVLKGGTGNDTLLGQDGADVLEGEAG--HDKLIGGAGDDYWV 757
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
NDS V + D G + +Y
Sbjct: 758 SGGTGNDSLYGEVGHDVLSGGRGRDYIEGGLDNDALFGDEGRDTLYAGEGDDYAEGGAG- 816
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ G+D L L + ++ IGG + ++ T +
Sbjct: 817 RDLVDGGAGHDVLKGGTGNDTL---LGQDGHDILEGEAGHDKLIGGAGDDYWVSGGTGND 873
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+ G +G+DV+ G+ ++ + +GNDV G +G D + I E A +Y
Sbjct: 874 SLYGEAGHDVLSGDEGRDLIYGGTGNDVVLGGAGRDRLY--GGEGEDIIVGNEGADRLYG 931
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
H + D ++ ++ A + +D +++ F
Sbjct: 932 DAGHDILNGGAGNDTIYGGTGNDIIDGGAEDVI---APRNLVANGSFEDNQLGNRNWGVF 988
Query: 390 GLSEGRDITFD---SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G EG T G DD + D + + G+ + A
Sbjct: 989 GSVEGWTTTQGKGIEVQQFGKADDGKARIELDSHNNSGMMQNLDTEAGKTYEISFAYTPR 1048
Query: 447 ASHEDLINA--------------------------FADAPDLVQVGKDHFSNFGCEEGRF 480
+ N + + F G ++
Sbjct: 1049 PGVAETSNPIEVYWNGELLDTITGASKTEAWKTYTYTVEAGEGETTALEFRAAGKDDSLG 1108
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
D S RN +G LE ++ LI
Sbjct: 1109 GYLDDVTVFESVSATRNDLLFGGEGDDIVLGNNGNDRLSGNQGNDILEGGFGNDTLIGGA 1168
Query: 541 ADAPDLV 547
+ +
Sbjct: 1169 GNDILVG 1175
Score = 44.0 bits (102), Expect = 0.080, Method: Composition-based stats.
Identities = 42/306 (13%), Positives = 77/306 (25%), Gaps = 10/306 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + A+ G G
Sbjct: 940 GGAGNDTIYGGTGNDIIDGGAEDVIAPRNLVANGSFEDNQLGNRNWGVFGSVEGWTTTQG 999
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
E DS S M + ++ + TP I
Sbjct: 1000 KGIEVQQFGKADDGKARIELDSHNNSGMMQNLDTEAGKTYEISFAYTPRPGVAETSNPIE 1059
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG- 254
G L + I + + T+ G+ L
Sbjct: 1060 VYWNGELLDTITGASKTEAWKTYTYTVEAGEGETT--ALEFRAAGKDDSLGGYLDDVTVF 1117
Query: 255 ---GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+N + + V+G++GND + GN N++ GND G +G D
Sbjct: 1118 ESVSATRNDLLFGGEGDDIVLGNNGNDRLSGNQGNDILEGGFGNDTLIGGAGNDILVGVD 1177
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
P+ + + ++ V + F+ + D S +++ + ED
Sbjct: 1178 PNAGFG----QGSVDVLTGGAGEDHFILGNAVAFYNDGDDQSAGTYDFAMITDFNTQEDK 1233
Query: 372 IQVIGQ 377
IQ+ G
Sbjct: 1234 IQLAGS 1239
>gi|148673639|gb|EDL05586.1| matrix metallopeptidase 16, isoform CRA_b [Mus musculus]
Length = 448
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 58/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P + R A W V LTFEE
Sbjct: 155 LTGQKWQHKHITYSIKNVTPKVG-------DPETRRAIRRAFDVWQNVTPLTFEEVPYSE 207
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 208 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 267
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 268 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 308
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 309 --FKLPN----DDLQGIQKIYGPPD 327
>gi|114620827|ref|XP_001136415.1| PREDICTED: matrix metalloproteinase 16 isoform 1 [Pan troglodytes]
Length = 624
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 59/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 139 LTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSE 191
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 192 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 251
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 252 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 292
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 293 --FKLPN----DDLQGIQKIYGPPD 311
>gi|329848566|ref|ZP_08263594.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843629|gb|EGF93198.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1009
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 76/484 (15%), Positives = 129/484 (26%), Gaps = 47/484 (9%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ NG + + FD D G I + G
Sbjct: 493 LTLNGNGGPNSLFGANLNDFLNGFDGNDRLVGNAGNDRIDGGTGNDTMEGGFG------- 545
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
D+ Y DS S++ A+ + D++ +
Sbjct: 546 ---------DDTYYIDSTADSIIDGNGQGYDYAFATATFSLAFTFVDVLYLTGSANINGT 596
Query: 201 SLGN----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G + + T+ GDD L+ +G V +N +
Sbjct: 597 GNGQSNLITGNTGNNRLDGAANNDTLTGGLGDDTYVLSNVGDV-----INENANEGTDTV 651
Query: 257 EKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E +T V+E++ S N GN+ NN+ ++G +V G G DT+
Sbjct: 652 ESAITFTLTDVLENLTLTGSANINGTGNAGNNILTGNTGVNVLTGGLGNDTYNVQNTGDN 711
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
E ++ + VE L +++ +IL + L
Sbjct: 712 VVEAANEGTDLINSTVTYSL-SGRQVENLTLTGSANVNATGNGFANILTGNSGNNILDGG 770
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
D + +S D+ ++ D L F + GA + G +
Sbjct: 771 ANNDTLAGGAGNDTYMISAAGDVVTENLN--EGIDTLETPFTTTLGANLENVTLTGSADL 828
Query: 435 RNPDAFKA--LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS- 491
L A L +Q D+ G V F + Y +
Sbjct: 829 NANGNALNNVLTGNAGVNVLTGGAGHDTYYIQNAGDNVVETSGN-GSDVIFSTVTYSLNL 887
Query: 492 -YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
Y + N+ GSD A G G + + G
Sbjct: 888 RYAETLNLIGSDNVNA------TGNSLGNTLGGND------GNNTINGKGGTDNLSGGLG 935
Query: 551 KDHF 554
D F
Sbjct: 936 ADLF 939
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 56/363 (15%), Positives = 104/363 (28%), Gaps = 20/363 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-----VKNYIDLNTESWSSIGGYEKNM-- 260
I Q + T Y G L G N +DL + N+
Sbjct: 432 SINQNQALFSLLGTTYGGNGITTFALPDFRGRTAIGAGNGVDLGERGGTESYSLSTNLFP 491
Query: 261 --TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
T+ + S+ G++ ND + G N+ ++GND DG +G DT Y I
Sbjct: 492 ALTLNGNGGPNSLFGANLNDFLNGFDGNDRLVGNAGNDRIDGGTGNDTMEGGFGDDTYYI 551
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++II + + F + L F + + + G +
Sbjct: 552 DSTADSIIDGNGQGYDYAFATATFSLAFTFVDVLYLTGSANINGTGNGQSNLITGNTGNN 611
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ + G D S + ++ + A
Sbjct: 612 RLDGAANNDTLTGGLGDDTYVLSNVGDVINENANEGTDTVESAITFTLTDVLENLTLTGS 671
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHF--------SNFGCEEGRFVTFDSYLYLG 490
A A + L +G D + EG + + Y
Sbjct: 672 ANINGTGNAGNNILTGNTGVNVLTGGLGNDTYNVQNTGDNVVEAANEGTDLINSTVTYSL 731
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQA 549
S + N+ + G+A + +G + L+ A+++ L + ++ A
Sbjct: 732 SGRQVENL--TLTGSANVNATGNGFANILTGNSGNNILDGGANNDTLAGGAGNDTYMISA 789
Query: 550 GKD 552
D
Sbjct: 790 AGD 792
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 76/289 (26%), Gaps = 34/289 (11%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E ++ ++ NG+ +S + D G G T + A +
Sbjct: 737 ENLTLTGSANVNATGNGFANILTGNSGNNILDGGANNDTLAGGAGNDTYMISAAGDVVTE 796
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L + + ++ + + + ++ A V A
Sbjct: 797 NLN----EGIDTLETPFTTTLGANLENVTLTGSADLNANGNALNNVLTGNAGVNVLTGGA 852
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
Y + G+N+ + D F + +L ++L
Sbjct: 853 GHDTYYIQ--NAGDNVVETSGNGSDVIFS----------TVTYSLNLRYAETLNLI---- 896
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ + G+S + + GN NN G D G G D FF+
Sbjct: 897 --------------GSDNVNATGNSLGNTLGGNDGNNTINGKGGTDNLSGGLGADLFFFD 942
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
A S I F A +++ + + +
Sbjct: 943 ANSGTDTITDFSAAQNDSINIAAYTGGVANAGLVTQSGSNVVITLGGAN 991
>gi|288939973|ref|YP_003442213.1| family 2 glycosyl transferase [Allochromatium vinosum DSM 180]
gi|288895345|gb|ADC61181.1| glycosyl transferase family 2 [Allochromatium vinosum DSM 180]
Length = 981
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F A Y+A D+ V+ H+ +G +EGR + FN YL Y D+
Sbjct: 51 FDADFYLAQAPDVAAR----TYWVENPALHYLLYGGQEGRRPSACFNSGWYLEQYPDVKA 106
Query: 582 VFGSDRSAAAQHYITHGMKEGR 603
HY+ HG EGR
Sbjct: 107 A----GMNPLLHYLHHGRTEGR 124
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 538
FD+ YL D+ A HY+ +G +EGR P A F + Y+ + D+
Sbjct: 48 SPYFDADFYLAQAPDVAARTYWVENPAL-HYLLYGGQEGRRPSACFNSGWYLEQYPDVKA 106
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSI 565
A P L H+ + G EGR
Sbjct: 107 A-GMNPLL------HYLHHGRTEGRLP 126
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F A Y+A D+ V+ H+ +G +EGR + F+S YL Y D++
Sbjct: 51 FDADFYLAQAPDVAAR----TYWVENPALHYLLYGGQEGRRPSACFNSGWYLEQYPDVKA 106
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
+ HY+ HG EGR P +AL
Sbjct: 107 AGMN----PLLHYLHHGRTEGRLPRPLRALT 133
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
FD+ YL D+ A HY+ +G +EGR P A F + Y+ + D+
Sbjct: 48 SPYFDADFYLAQAPDVAAR-TYWVENPALHYLLYGGQEGRRPSACFNSGWYLEQYPDVKA 106
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFV 481
A + H+ + G EGR
Sbjct: 107 AGMNPLL-------HYLHHGRTEGRLP 126
Score = 45.2 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 385 HFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
H+ +G EGR + F+S YL Y D++ HY+ HG EGR P +A
Sbjct: 76 HYLLYGGQEGRRPSACFNSGWYLEQYPDVKAA----GMNPLLHYLHHGRTEGRLPRPLRA 131
Query: 443 LEY 445
L +
Sbjct: 132 LTW 134
Score = 42.1 bits (97), Expect = 0.33, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
S F+ D YL D+ A HY+ +G +EGR
Sbjct: 48 SPYFDADFYLAQAPDV-AARTYWVENPALHYLLYGGQEGR 86
>gi|126724418|ref|ZP_01740261.1| hypothetical protein RB2150_11321 [Rhodobacterales bacterium
HTCC2150]
gi|126705582|gb|EBA04672.1| hypothetical protein RB2150_11321 [Rhodobacterales bacterium
HTCC2150]
Length = 11732
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 67/257 (26%), Gaps = 22/257 (8%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG-SSGNDVV 280
I S G+D + + K I + I + + + +V
Sbjct: 5890 IDGSDGNDEIIIADTFTRKATIRGGAGRDNLISYADAEIYFDGGAGNDKLVQYGDSAVTF 5949
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G ++ SSG D G +G D + LY L D
Sbjct: 5950 FGGDGDDELIGSSGADTLHGGAGKDIIYGDEAGSLYGTADSG--------------QLGD 5995
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ + ++ + + G D + E EGRD
Sbjct: 5996 GDMIYGGAGDDLIYGQYGDDVIFGDDGADIIYGQDGNDQLNAGSGRDELYGGEGRDRLKG 6055
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
V G D+ A + ++ D ++ + D+++ +A
Sbjct: 6056 VSGV------NLLVGGDDQDAVLGGSGSDTIRWVVGDDI-DTVDGGGGNSDVLDLYAAEF 6108
Query: 461 DLVQVGKDHFSNFGCEE 477
KD +
Sbjct: 6109 IGGAASKDSIEILSGAD 6125
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 50/172 (29%), Gaps = 9/172 (5%)
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
+ D G + IYG GSL Y +
Sbjct: 5940 VQYGDSAVTFFGGDGDDELIGSSGADTLHGGAGKDIIYGDEAGSL----YGTADSGQLGD 5995
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
IY GDDL+ G + + + I G + N + + + + G G
Sbjct: 5996 G-DMIYGGAGDDLI----YGQYGDDVIFGDDGADIIYGQDGNDQLNAGSGRDELYGGEGR 6050
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
D + G S N+ D G SG DT + + + V D
Sbjct: 6051 DRLKGVSGVNLLVGGDDQDAVLGGSGSDTIRWVVGDDIDTVDGGGGNSDVLD 6102
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 58/171 (33%), Gaps = 10/171 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ T +G +D + + G + +DL+ + G +I
Sbjct: 6228 GNRTFLQSITLRDTARGTGEEDTVRIE-TGAGDDTVDLSGQQILQGGAGGLVRSIDLGDG 6286
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-----APSYLYKIYRFE 322
+ +GS ++++ ++ G DV S G DT+ Y + K
Sbjct: 6287 DDYFIGSKQDEIISLGDGDDTVDAGLGIDVIIDSGGRDTYVYDAKEQGGDNNAVKFTVDG 6346
Query: 323 NAIIVYDANEHKQDFLSDVERLRFA----DQCIDSVNVKQRSILEYTASYE 369
+ + + ++L D+E L+ + D D QR ++ +
Sbjct: 6347 QQVRIEQGGTTQVEYLWDMEVLKLSGTAQDDTFDMTGTTQRLEIDGRDGSD 6397
Score = 43.6 bits (101), Expect = 0.096, Method: Composition-based stats.
Identities = 55/458 (12%), Positives = 116/458 (25%), Gaps = 52/458 (11%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
H+++ F ++ G T + + D + G G + +
Sbjct: 11195 AGDHAELVFAAATAGQYLTQMRTFQSSDWADLAGDDSFTTGDGDVRTILGIGSDILVQGD 11254
Query: 133 GLM-HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA- 190
GL G N +S ++ +DS + A D
Sbjct: 11255 GLGYVIGDLGSLDQDNAAFNLSRIESMPDAITLTSASKDSWTAGDGEHVAIMGADDDTVV 11314
Query: 191 ---------VQKIYGAPKGSLG--------NNIYKIEVQQKDSPFIQTIYDSGGDDLLDL 233
+ Y + G + GG+D +
Sbjct: 11315 LGNGPVQVLLDHSYILRDATNGKLIHAKDETTAGWGNDSLVAGSGWGFVIGGGGNDTIAT 11374
Query: 234 TLIGGV-KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
ID G + N +A + V + ++
Sbjct: 11375 GRTTNGEVAEIDGRHAILGDAGYIDANSALAGAMELTRV-----ESYMPAIFGDDTISGG 11429
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+G D+ G +G D E +DF++ L D
Sbjct: 11430 AGRDIVIGGAGSD----------------------DVHGEAGRDFVAGDYLLMDFDDAGL 11467
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL--YLGSYDD 410
+ L + + + D F G++ D+ F+++ D
Sbjct: 11468 IREAITQRDLYFMGEGDLVTTGYDGDFVFGGTQFNTMGVAASVDVIFETFGRILFEQGRD 11527
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ + A ++ VK+G+ P + + ++ + + + +
Sbjct: 11528 IEKIERLVNLGVASSFLDERVKDGQVPSS-GSQTKDGTNPIIGSVSTGGLTGQEDIMNQN 11586
Query: 471 SNFGCEEGRFVTFDSYLYLGSY--DDLRNVFGSDRGAA 506
+ +G F + D + G+D A
Sbjct: 11587 IDSSFSDGGFTLTGTSGGASETFLSDAGSTGGADPTRA 11624
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 60/468 (12%), Positives = 111/468 (23%), Gaps = 85/468 (18%)
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
+ M F D + A+ T D+ A+ YG + G+ + I
Sbjct: 10997 TVAGFQMMSFSSDDDGVSAAGHDSFTTGDGDVRAILG-YGNDSLTKGDGLAVILGDTGTI 11055
Query: 217 PFIQTIYDSG---------------GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ D D +D G +Y+ + + G + +
Sbjct: 11056 TATSSPLDPSIYVPRQMLYRADALSVHDGVDTVTSGDGSHYVIMGGMGDTVKTGDGEVIA 11115
Query: 262 IAQHTVIE-----------SVVGSSGNDVVIGNSANNVFFESSG-NDVFDGSSGLDTF-- 307
+ +I+ + S V NS ++ F G V G +G DT
Sbjct: 11116 LGDWGIIDFDADHTLRTVSNTPNSGMETTVTDNSGDDSFELGEGVRHVVMGGAGNDTVLA 11175
Query: 308 -----------------FYYAPSYLYKIYRFENAIIVY---DANEHKQDFLSDVERLRFA 347
++ + L+ +
Sbjct: 11176 QVDENGDSVANLARNDSYFAGDHAELVFAAATAGQYLTQMRTFQSSDWADLAGDDSFTTG 11235
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL---- 403
D + ++ IL +I +G ++ S IT S
Sbjct: 11236 DGDVRTILGIGSDILVQGDGLGYVIGDLGSLDQDNAAFNLSRIESMPDAITLTSASKDSW 11295
Query: 404 ----------YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
D + G + YI G+ A ++ L+
Sbjct: 11296 TAGDGEHVAIMGADDDTVVLGNGPVQVLLDHSYILRDATNGKLIHAKDETTAGWGNDSLV 11355
Query: 454 NAFADAPDLVQVGKDHFSNFGCE-------EGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ G D + +GR Y+ + L
Sbjct: 11356 AGSGWGFVIGGGGNDTIATGRTTNGEVAEIDGRHAILGDAGYIDANSALAGAMELT---- 11411
Query: 507 ARHYITHGVKEGRNPDAF--KALEYIASHEDLINAFADAPDLVQAGKD 552
E P F + A + +I +AG+D
Sbjct: 11412 --------RVESYMPAIFGDDTISGGAGRDIVIGGAGSDDVHGEAGRD 11451
>gi|3182966|sp|O35548|MMP16_RAT RecName: Full=Matrix metalloproteinase-16; Short=MMP-16; AltName:
Full=Membrane-type matrix metalloproteinase 3;
Short=MT-MMP 3; Short=MTMMP3; AltName:
Full=Membrane-type-3 matrix metalloproteinase;
Short=MT3-MMP; Short=MT3MMP; Flags: Precursor
gi|2424975|dbj|BAA22224.1| MT3-MMP [Rattus rattus]
Length = 607
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 58/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P + R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRRAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDRSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|254559514|ref|YP_003066609.1| hypothetical protein METDI0968 [Methylobacterium extorquens DM4]
gi|254266792|emb|CAX22591.1| hypothetical protein METDI0968 [Methylobacterium extorquens DM4]
Length = 294
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 39/132 (29%), Gaps = 21/132 (15%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
FD+ Y HY G + RNP+ F Y
Sbjct: 29 FDAAYYRERNPGAARSGLD----PFLHYAWFGARRDRNPNADFDTAFYRRQSG------- 77
Query: 542 DAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
H+ G +G S F+ LYL Y D+ QH+ T G
Sbjct: 78 ---RTRLDPLRHYGQIGAAQGLDPSPGFSTSLYLARYPDVVAA----GVNPLQHFRTDGR 130
Query: 600 KEGRALGISGMQ 611
EGR S ++
Sbjct: 131 AEGREAAPSPIE 142
Score = 57.1 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 38/134 (28%), Gaps = 22/134 (16%)
Query: 394 GRDI-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHED 451
GR FD+ Y HY G + RNP+ F Y
Sbjct: 23 GRVPKLFDAAYYRERNP----GAARSGLDPFLHYAWFGARRDRNPNADFDTAFYRRQS-- 76
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
H+ G +G F + LYL Y D+ + +H
Sbjct: 77 --------GRTRLDPLRHYGQIGAAQGLDPSPGFSTSLYLARYPDVVAAGVN----PLQH 124
Query: 510 YITHGVKEGRNPDA 523
+ T G EGR
Sbjct: 125 FRTDGRAEGREAAP 138
Score = 44.4 bits (103), Expect = 0.064, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 14/98 (14%)
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYL 403
F + + N + S G+ + ++H+ + G ++G D + F + L
Sbjct: 55 FGARRDRNPNADFDTAFYRRQS--------GRTRLDPLRHYGQIGAAQGLDPSPGFSTSL 106
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
YL Y D+ +H+ T G EGR
Sbjct: 107 YLARYPDVVAA----GVNPLQHFRTDGRAEGREAAPSP 140
>gi|189218532|ref|YP_001939173.1| SAM-dependent methyltransferase [Methylacidiphilum infernorum V4]
gi|189185390|gb|ACD82575.1| SAM-dependent methyltransferase [Methylacidiphilum infernorum V4]
Length = 320
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 14/93 (15%)
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTS 575
GR F Y S+ + + DH+ G++EG++ + FN YL S
Sbjct: 14 GR-LGFFDEKFYCQSYPEACKG-------GISPLDHYLEIGWKEGKNPSLSFNSSWYLNS 65
Query: 576 YDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
Y D+ HYI G+ EGR S
Sbjct: 66 YPDV----AKSGINPLVHYIEFGIFEGRLPAPS 94
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDL 536
GR FD Y SY + + HY+ G KEG+NP +F + Y+ S+ D+
Sbjct: 14 GRLGFFDEKFYCQSYPEACK----GGISPLDHYLEIGWKEGKNPSLSFNSSWYLNSYPDV 69
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSI 565
+ P + H+ FG EGR
Sbjct: 70 AKS-GINPLV------HYIEFGIFEGRLP 91
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 12/89 (13%)
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDL 452
GR FD Y SY + + HY+ G KEG+NP +F + Y+ S+ D+
Sbjct: 14 GRLGFFDEKFYCQSYPEACKG----GISPLDHYLEIGWKEGKNPSLSFNSSWYLNSYPDV 69
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ + H+ FG EGR
Sbjct: 70 AKSGINP-------LVHYIEFGIFEGRLP 91
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 13/88 (14%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
F Y S+ + DH+ G +EG+ + F+S YL SY D+
Sbjct: 17 GFFDEKFYCQSYPEACKGGISP-------LDHYLEIGWKEGKNPSLSFNSSWYLNSYPDV 69
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDA 523
+ HYI G+ EGR P
Sbjct: 70 AKSGIN----PLVHYIEFGIFEGRLPAP 93
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 6/98 (6%)
Query: 383 MKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ H+ E G EG++ +F+S YL SY D+ HYI G+ EGR P
Sbjct: 39 LDHYLEIGWKEGKNPSLSFNSSWYLNSYPDVAKS----GINPLVHYIEFGIFEGRLPAPS 94
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ + A + + + + G +
Sbjct: 95 FCWNKRLDYPGSVKALFSSHSREKAAELAVGSAGQFQS 132
Score = 41.7 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Query: 562 GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFK 613
GR F+ Y SY + + HY+ G KEG+ +S
Sbjct: 14 GRLGFFDEKFYCQSYPEACK----GGISPLDHYLEIGWKEGKNPSLSFNSSW 61
>gi|71736991|ref|YP_273097.1| calcium binding hemolysin protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557544|gb|AAZ36755.1| calcium binding hemolysin protein, putative [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 5107
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 68/501 (13%), Positives = 129/501 (25%), Gaps = 76/501 (15%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ SD S G + + D G T+ +
Sbjct: 4530 NQVLQGSDADETLSGTGGNDVIDAGAGDDVINGAAGNDTLTGNAGADTLNGGEGNDVLLG 4589
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G G + G + + D F + Y D +
Sbjct: 4590 GAGNDSLSGGVGNDSLDGGAGNDQLDGGEGDDTYLFGKGAGQDTIYYAYENREGKLDTIK 4649
Query: 191 VQKIYGAPKG--SLGNN--------------IYKIEVQQKDSPFIQTIYDSGGDDL---- 230
+ + + GN+ +Y + I + + G
Sbjct: 4650 LTDLNASDVSVRRDGNDLIIRVLGSTDSLRVVYHFQSDAAGGYQIDRLVFADGSVWDQTQ 4709
Query: 231 ----------LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
D TL G N + ++ G N T++ + + G +GND++
Sbjct: 4710 IKSQVLQGSDSDETLSGTSGNDVISAGAGDDTVNGGSGNDTLSGGAGADMLNGDAGNDLL 4769
Query: 281 IGNSANNVFFESSGNDVFDGSSGL---------DTFFYYAPSYLYKIY------------ 319
G ++N+ + GNDV DG +G DT+ + + IY
Sbjct: 4770 QGGASNDTLYGGDGNDVLDGGAGNDQLNGGDGDDTYLFGKGAGQDTIYYANEARVGKLDT 4829
Query: 320 -------------------------RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+ + V + +++L+FAD + S
Sbjct: 4830 VKLADLNVSDVSITRDSSDLLIRVNGTTDNLRVMNHFAEDATSGYQIDQLQFADGTLWSQ 4889
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ + +L +S + L DV + G+D + Y + N
Sbjct: 4890 STIKSQVLLGNSSDQTLRGYASDDVINAGDGDDTVSGGAGKDSLYGGKGIDMLYGEEGND 4949
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
Y G +L + D++
Sbjct: 4950 RLYGEAGNDTLYGGAGNDVLNGGTGNDSLAGGDGSDTYEFNIGSGRDVINNYDVSGGTDA 5009
Query: 475 CEEGRFVTFDSYLYLGSYDDL 495
+ G V+ + + S DL
Sbjct: 5010 LQFGTDVSLEDLWFRRSGSDL 5030
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 57/359 (15%), Positives = 105/359 (29%), Gaps = 39/359 (10%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TL G + + + ++ G N +++ T +++ G GND++ G S N+V
Sbjct: 3247 DETLTGFASDDVIDGSGGDDTLNGAAGNDSLSGGTGSDTLNGEDGNDLLQGGSGNDVLNG 3306
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+GNDV DG +G D A +Y + ++Y ANE + + ++ + I
Sbjct: 3307 GAGNDVLDGGAGNDRLDGGAGDDIYLFGKGSGQDVIYYANEARTGKVDTIQLVGLNAGDI 3366
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+L + D + HF S + +
Sbjct: 3367 SISRAGYDLVLRVNGT---------TDSLRVVYHFLSDATSGYQIDRIQFADGNIWGQET 3417
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
A ++ +G + A Y A+ D + + + D
Sbjct: 3418 IKSLALQGTDADQYLEGYGTDDLIEAGAGDDTVYGAAGNDKLFGNSGDDVVNGDDGDDLV 3477
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
G D+ D L L A
Sbjct: 3478 QGGS------GNDTLNGGAGNDVLDG-----------------------GTGNDILNGGA 3508
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
++ L + AG D + FG G+ + + D + G +
Sbjct: 3509 GNDLLDGGAGNDRLDGGAGDDTYL-FGKGSGQDTIYYANETRAGKVDTIQLVGLGAADI 3566
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 88/310 (28%), Gaps = 37/310 (11%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + + + D+ D L G + + ++ G
Sbjct: 667 NIHFADGTTWTLNQLKTMALITTEGNDNVWGYATDDILSGSLGDDRLSGEAGDDTLLGEA 726
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N +A ++++G++ ND + G+S N+ +GND G G D + +
Sbjct: 727 GNDYLAGGEGNDTLLGNADNDTLYGDSGNDELDGGAGNDYLTGGDGSDVYRFSRGWGQDS 786
Query: 318 IYRFENAIIVYDANEHKQDFLS-------------------------------------D 340
I ++++ DA E D L
Sbjct: 787 ISNYDSSAEKTDAIEFAPDILPADITVTRSNSELILSLKNSTDKITVAGYFQNDGITPYA 846
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+E++RFAD +++ + + T +++ D+ + G D F
Sbjct: 847 LEQIRFADGTTWNLDQIKALSILTTDGNDNVWGYASDDILKGGAGADSLSGEAGNDALFG 906
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
Y + S G L + ++ L +
Sbjct: 907 EDGNDSLYGGVGADQLSGGEGGDYLTGGDGNDTLLGDAGNDTLYGDSGNDLLEGGTGNDY 966
Query: 461 DLVQVGKDHF 470
+ G D +
Sbjct: 967 LIGGEGSDVY 976
Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 60/429 (13%), Positives = 114/429 (26%), Gaps = 17/429 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI-GHALGL 134
+ T D + D G G + + G A
Sbjct: 3652 GGAGNDKLAGGAGADTLSGDEGNDLLQGGSGNDTLTGGAGDDVLDGAAGNDRLDGGAGDD 3711
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G N+ T + D + + ++ +
Sbjct: 3712 TYLFGKGSGQDTLYYVNEARAGKVDTIQLVGLGVSDVSVSRDGYDLVVRVNGTTDTLRVM 3771
Query: 195 Y---GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Y G + + I G+D + ID
Sbjct: 3772 YHFMGDATSGYQIDRIQFADGNIWGQDTIKIQALLGNDADQYLAGYATDDLID-AGGGDD 3830
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G N T+ + +++ G GND++ G + N++ +GNDV DG +G D A
Sbjct: 3831 TINGAAGNDTLIGGSGADTLSGEEGNDLLQGGAGNDILNGGAGNDVLDGGAGNDRLDGGA 3890
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y + +Y ANE + + V+ + + V ++ + + L
Sbjct: 3891 GDDTYLFGKGSGQDTIYYANETRAGKVDQVKLVGLNAADVSVVREGYDLVIRINGTTDTL 3950
Query: 372 IQVIGQDVFESMKHF--YEFGLSEGRDITFDS----YLYLGSYDDLRNVFGSD-----RG 420
V+ + ++ + ++G + + L + F SD
Sbjct: 3951 R-VMYHFMSDATAGYQIDRIEFADGSNWDQSAIKAQVLTRSDAAQVLTGFASDDLIDGGA 4009
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
Y G D +L + L + G D +
Sbjct: 4010 DDDTLYGGAGQDRLLGGDGADSLNGDEGDDYLNGGAGNDSLAGGSGNDVLDGGAGNDRLD 4069
Query: 481 VTFDSYLYL 489
YL
Sbjct: 4070 GGAGDDTYL 4078
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/459 (13%), Positives = 114/459 (24%), Gaps = 78/459 (16%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA----------- 124
+ N T DS D G G
Sbjct: 733 GGEGNDTLLGNADNDTLYGDSGNDELDGGAGNDYLTGGDGSDVYRFSRGWGQDSISNYDS 792
Query: 125 ----LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
I A ++ P + +N + +V YF A
Sbjct: 793 SAEKTDAIEFAPDIL-PADITVTRSNSELILSLKNSTDKITVAGYFQNDGITPYALEQIR 851
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGG 238
+ + K +N++ K ++ G+D L G
Sbjct: 852 FADGTTWNLDQIKALSILTTDGNDNVWGYASDDILKGGAGADSLSGEAGNDAL----FGE 907
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
N + G E + ++++G +GND + G+S N++ +GND
Sbjct: 908 DGNDSLYGGVGADQLSGGEGGDYLTGGDGNDTLLGDAGNDTLYGDSGNDLLEGGTGNDYL 967
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENA---------------------------------- 324
G G D + + I ++++
Sbjct: 968 IGGEGSDVYRFNRGWGQDSINNYDSSAGKTDAIEFAADILPVDIVVTRSYNDLVLSLKHS 1027
Query: 325 ---IIVYDANEHKQDFLSDVERLRFADQC----------IDSVNVKQRSILEYTASYEDL 371
+ + ++ D VE++RFAD L AS + +
Sbjct: 1028 TDKVTISGYFQNDGDTPYTVEQIRFADGTHWNVEQIKSMAAFTFTDGNDALTGYASDDRI 1087
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+ +G DV + EG D Y G+ D + Y G
Sbjct: 1088 VGGMGDDVLSGLAGNDVVNGDEGSDTL-----YGGTGQDTLSGGSGSDYL----YGEEGN 1138
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L ++ L + G D +
Sbjct: 1139 DLLAGNAGSDILYGADGNDILDGGTGNDTLDGGRGSDIY 1177
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/431 (13%), Positives = 103/431 (23%), Gaps = 80/431 (18%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + + D+ G G + G
Sbjct: 3479 GGSGNDTLNGGAGNDVLDGGTGNDILNGGAGNDLLDGGAGNDRLDGGAGDDTYLFGKGSG 3538
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
Y G + + + +S ++ G + V A
Sbjct: 3539 QDTIYYANETRAGKVDTIQLVGLGAADISVSRDGSDLVIRVNGTTDSLRVVYHFAGDATS 3598
Query: 196 G-------APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
G GS + + S Q + DDL+D GG + +
Sbjct: 3599 GYQIDRIQFADGSAWDQEAIKSQVLQGSDADQYLAGYATDDLID----GGAGDDTIVGGA 3654
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G T++ + + G SGND + G + ++V ++GND DG +G DT+
Sbjct: 3655 GNDKLAGGAGADTLSGDEGNDLLQGGSGNDTLTGGAGDDVLDGAAGNDRLDGGAGDDTYL 3714
Query: 309 YYAPSYLYKIYRFEN--------------AIIVYDANEHKQDFLS--------------- 339
+ S +Y + + D +
Sbjct: 3715 FGKGSGQDTLYYVNEARAGKVDTIQLVGLGVSDVSVSRDGYDLVVRVNGTTDTLRVMYHF 3774
Query: 340 --------DVERLRFADQCI---------------------------DSVNVKQRSILEY 364
++R++FAD I +
Sbjct: 3775 MGDATSGYQIDRIQFADGNIWGQDTIKIQALLGNDADQYLAGYATDDLIDAGGGDDTING 3834
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----FDSYLYLGSYDDLRNVFGSDR 419
A + LI G D + G DI D D L G D
Sbjct: 3835 AAGNDTLIGGSGADTLSGEEGNDLLQGGAGNDILNGGAGNDVLDGGAGNDRLDGGAGDDT 3894
Query: 420 GAAARHYITHG 430
+
Sbjct: 3895 YLFGKGSGQDT 3905
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 58/447 (12%), Positives = 111/447 (24%), Gaps = 84/447 (18%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + T + + DV G G T+ A G
Sbjct: 1494 GGAGRDTLYGDDGADTLLGGADNDSLAGGNGDDVLDGGTGNDTLEGGKGSDTYIFAKGAG 1553
Query: 136 HPGSYNGG--------------YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
N + D +S V + + + F +
Sbjct: 1554 SDAIDNSSYNDITANKLDVVRLDGLNSEDVSLRRESDDLIVQVRQTGESLRIRSHFASDS 1613
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
I ++ G ++ + G D D +
Sbjct: 1614 GSWSYAIDQLKFADGTIWDRAHITAALLDGTDGNDTIT-------GYDTADTLSGLAGND 1666
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
++ + G + ++ + ++G +GND + G N+ +GND +G
Sbjct: 1667 TLNGRNG-NDLLDGGDGKDSLNGEAGDDFLLGGAGNDTLSGGEGNDTLDGGTGNDSLEGG 1725
Query: 302 SGLDTFFYYAPSYLYKIYRFENAII----------------------------------- 326
G DT+ + S +Y +
Sbjct: 1726 IGSDTYIFRKGSGQDIVYNYAYNESTPNKLDVVRLEGLTAEDVSIRRESDDLVIQIRQTG 1785
Query: 327 ----VYDANEHKQDFLSDVERLRFADQCI---------DSVNVKQRSILEYTASYEDLIQ 373
V Q + + +L+FAD + + + + A+ ++L
Sbjct: 1786 ETLRVSSHFAVDQTYGYAINQLQFADGTVWDQAKITSALLIGTEGSDSIIGYATADELAG 1845
Query: 374 VIGQDVFESMKHFYEFGLSEGRDIT--------------FDSYLYLGSYDDLRNVFGSDR 419
+ G DV EGRD D+ D L G+D
Sbjct: 1846 LEGDDVLNGRAGDDLLSGGEGRDTLNGEDGADTLLGGLGNDTLNGGAGNDTLDGGAGNDS 1905
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYI 446
+ T+ ++G D Y
Sbjct: 1906 LEGGKGSDTYIYRKGSGQDTISNYSYN 1932
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 64/425 (15%), Positives = 112/425 (26%), Gaps = 60/425 (14%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D T + + D G G T + G +
Sbjct: 2423 YGEDGNDTLQGGAGNDTLSGGYGNDLLDGGNGNDSLDGGYGSDTYVFRK-----GSGQDI 2477
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ +YN E + VM + G
Sbjct: 2478 ISNYAYNDTTVDKLDVIRLEGLNASDVVMRRESDDLVIQIKDSGETLRVGSHFYPYANYG 2537
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSS 252
YG + + Q K + T D G D D L+G N I +
Sbjct: 2538 YGIDQVQFADGTVLTSAQIKTALLTGTEVDESVVGYDSAD-RLLGLSGNDILYGRQGDDV 2596
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + T+ ++++G SG D + G N++ SGND DG G DT+ +
Sbjct: 2597 LDGGDGKDTLYGEEGNDTLLGGSGYDTLSGGYGNDLLDGGSGNDSLDGGFGSDTYVFRKG 2656
Query: 313 SYLYKIYRFENAIIVYDANE---------------------------------------H 333
S I + D +
Sbjct: 2657 SGQDSISNYAYNDTTVDKLDVIRLEGLNASDVVMRRESDDLVIQIKDSGETLRVGSHFYA 2716
Query: 334 KQDFLSDVERLRFADQ---------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ +++++FAD + + S ++L+ + G D+ ++
Sbjct: 2717 NATYGYGIDQVQFADGSVLTNAQIRTALLTGTEGDESISGYDSADNLLGLSGNDLLYGLQ 2776
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+GRD D L G+D T+ ++G D
Sbjct: 2777 GDDTLKGGDGRDTL----SGGDGNDTLDGGAGNDSLDGGYGSDTYVFRKGSGQDTINNYS 2832
Query: 445 YIASH 449
Y +
Sbjct: 2833 YNDTT 2837
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 58/422 (13%), Positives = 110/422 (26%), Gaps = 24/422 (5%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG--LMHPGSYN 141
T + + D AD G + + G ++ G+ N
Sbjct: 4006 DGGADDDTLYGGAGQDRLLGGDGADSLNGDEGDDYLNGGAGNDSLAGGSGNDVLDGGAGN 4065
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
D+ Y Y+ + +D+ + Y
Sbjct: 4066 DRLDGGAGDDTYLFGKGSGQDTIYYANESRAGKVDQVKLVDLNAADVSVARDGYDLVIRI 4125
Query: 202 LGNN-----IYKIEVQQKDSPFIQTIYDSGGD--------------DLLDLTLIGGVKNY 242
LG +Y I I + G D TL G +
Sbjct: 4126 LGTTDTLRVVYHFMGDATAGYQIDRIAFADGGFWDQTAIKAQVLQGTEADETLSGTGSDD 4185
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ S+ G N T++ + +++ G GNDV+ G + + +GND DG +
Sbjct: 4186 VIYAAAGDDSVNGGSGNDTLSGGSGADTLNGEDGNDVLNGGDGKDSLYGGNGNDQLDGGA 4245
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D Y + +Y A E + D L V+ + + ++
Sbjct: 4246 GNDMLDGGNGDDTYLFGKGSGQDSIYYAYEGRADKLDTVKLIDLNAADVSVRRDGNDLLI 4305
Query: 363 EYTASYEDLIQVIGQDVFESMKHF--YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ + L V+ ++ + ++G S + +
Sbjct: 4306 RVLGTTDSLR-VVAHFTNDATYGYQVDRIQFADGNSWNQASIKSAVLQGTDADETLAGTA 4364
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ G L + L D L +G D + +
Sbjct: 4365 ISDSIDAGAGDDTVNGGSGDDTLSGSKGADTLNGEAGDDLLLGGMGNDTLNGGLGNDILD 4424
Query: 481 VT 482
Sbjct: 4425 GG 4426
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 68/468 (14%), Positives = 127/468 (27%), Gaps = 69/468 (14%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ T S D DV G GK ++ N ++ G G
Sbjct: 4197 NGGSGNDTLSGGSGADTLNGEDGNDVLNGGDGKDSLYGGNGNDQLDGGAG-NDMLDGGNG 4255
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-- 201
Y DS + D++ + D + S
Sbjct: 4256 DDTYLFGKGSGQDSIYYAYEGRADKLDTVKLIDLNAADVSVRRDGNDLLIRVLGTTDSLR 4315
Query: 202 -----LGNNIYKIEVQQKDSPFIQTIYDSG-------GDDLLDLTLIGGVKNYIDLNTE- 248
+ Y +V + + + G D + + + ID
Sbjct: 4316 VVAHFTNDATYGYQVDRIQFADGNSWNQASIKSAVLQGTDADETLAGTAISDSIDAGAGD 4375
Query: 249 -------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG- 300
++ G + T+ + ++G GND + G N++ +GND DG
Sbjct: 4376 DTVNGGSGDDTLSGSKGADTLNGEAGDDLLLGGMGNDTLNGGLGNDILDGGAGNDRLDGG 4435
Query: 301 ----------SSGLDTFFY--------------------------YAPSYLYKIYRFENA 324
+G DT +Y L + ++
Sbjct: 4436 DGDDTYLFARGAGQDTVYYAYESRIGKLDTVKLTELNAVDVSVRRDGSDLLILVLGSTDS 4495
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ V + + ++R++FAD + + +L+ + + E L G DV ++
Sbjct: 4496 LRVMSHFTNDATYGYQIDRIQFADGSFWDQSAIKNQVLQGSDADETLSGTGGNDVIDAGA 4555
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ G D + D L G+D G +L+
Sbjct: 4556 GDDVINGAAGNDTLTGNAG----ADTLNGGEGNDVLL-----GGAGNDSLSGGVGNDSLD 4606
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
A ++ L D L G + + E R D+
Sbjct: 4607 GGAGNDQLDGGEGDDTYLFGKGAGQDTIYYAYENREGKLDTIKLTDLN 4654
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 65/525 (12%), Positives = 125/525 (23%), Gaps = 61/525 (11%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ SD + + + D G G T+ +
Sbjct: 3620 SQVLQGSDADQYLAGYATDDLIDGGAGDDTIVGGAGNDKLAGGAGADTLSGDEGNDLLQG 3679
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G G + G + D F + A D +
Sbjct: 3680 GSGNDTLTGGAGDDVLDGAAGNDRLDGGAGDDTYLFGKGSGQDTLYYVNEARAGKVDTIQ 3739
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ + G S+ + Y + V+ G D L + +
Sbjct: 3740 LVGL-GVSDVSVSRDGYDLVVRVN-----------GTTDTLRVMYHFMGDAT---SGYQI 3784
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
I + N+ I++++G+ + + G + +++ G+D +G++G DT
Sbjct: 3785 DRIQFADGNIWGQDTIKIQALLGNDADQYLAGYATDDLIDAGGGDDTINGAAGNDTLI-- 3842
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + E D L IL A +
Sbjct: 3843 -----------GGSGADTLSGEEGNDLLQG---------------GAGNDILNGGAGNDV 3876
Query: 371 LIQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
L G D + FG G+D + + D + G + +
Sbjct: 3877 LDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYYANETRAGKVDQVKLVGLNAADVSVVREG 3936
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG--------KDHFSNFGCEEGRF 480
+ + N D + G K
Sbjct: 3937 YDLVIRINGTTDTLRVMYHFMSDATAGYQIDRIEFADGSNWDQSAIKAQVLTRSDAAQVL 3996
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-------FKALEYIASH 533
F S + D ++G G D +L + +
Sbjct: 3997 TGFASDDLIDGGADDDTLYGGAGQDRLLGGDGADSLNGDEGDDYLNGGAGNDSLAGGSGN 4056
Query: 534 EDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDD 578
+ L + AG D + FG G+ + + D
Sbjct: 4057 DVLDGGAGNDRLDGGAGDDTYL-FGKGSGQDTIYYANESRAGKVD 4100
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 70/541 (12%), Positives = 129/541 (23%), Gaps = 63/541 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D G + D G + + + G
Sbjct: 3425 GTDADQYLEGYGTDDLIEAGAGDDTVYGAAGNDKLFGNSGDDVVNGDDGDDLVQGGSGND 3484
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + G + + + + + +D G T + IY
Sbjct: 3485 TLNGGAGNDVLDGGTGNDILNGGAGNDLLDGGAGNDRLDGGAG-DDTYLFGKGSGQDTIY 3543
Query: 196 GAPKGSLG--NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
A + G + I Q G DL+ + + ++
Sbjct: 3544 YANETRAGKVDTI-----QLVGLGAADISVSRDGSDLVIRVNGTTDSLRVVYHFAGDATS 3598
Query: 254 GGYEKNMTIAQHTVIE-------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
G + A + + + GS + + G + +++ +G+D G +G D
Sbjct: 3599 GYQIDRIQFADGSAWDQEAIKSQVLQGSDADQYLAGYATDDLIDGGAGDDTIVGGAGNDK 3658
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
A D LS E L A
Sbjct: 3659 L----------------------AGGAGADTLSGDE------GNDLLQGGSGNDTLTGGA 3690
Query: 367 SYEDLIQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ L G D + FG G+D + D + G +
Sbjct: 3691 GDDVLDGAAGNDRLDGGAGDDTYLFGKGSGQDTLYYVNEARAGKVDTIQLVGLGVSDVSV 3750
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ + N D + + G + + + D
Sbjct: 3751 SRDGYDLVVRVNGTTDTLRVMYHFMGDATSGYQIDRIQFADGNI-WGQDTIKIQALLGND 3809
Query: 485 SYLYLGSY--DDLRNVFGSDRG--------------AAARHYITHGVKEGRNPDAFKALE 528
+ YL Y DDL + G D A G + L
Sbjct: 3810 ADQYLAGYATDDLIDAGGGDDTINGAAGNDTLIGGSGADTLSGEEGNDLLQGGAGNDILN 3869
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRS 588
A ++ L + AG D + FG G+ + + D + G + +
Sbjct: 3870 GGAGNDVLDGGAGNDRLDGGAGDDTYL-FGKGSGQDTIYYANETRAGKVDQVKLVGLNAA 3928
Query: 589 A 589
Sbjct: 3929 D 3929
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 77/579 (13%), Positives = 136/579 (23%), Gaps = 112/579 (19%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + T DS + D G G + G
Sbjct: 932 TGGDGNDTLLGDAGNDTLYGDSGNDLLEGGTGNDYLIGGEGSDVYRFNRGW-------GQ 984
Query: 135 MHPGSYNGGYPVYGVDNDYEND---------SFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+Y+ + S+ V+S D + + +
Sbjct: 985 DSINNYDSSAGKTDAIEFAADILPVDIVVTRSYNDLVLSLKHSTDKVTISGYFQNDGDTP 1044
Query: 186 SDIVAVQKIYGA------PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ ++ G K I GDD+L G
Sbjct: 1045 YTVEQIRFADGTHWNVEQIKSMAAFTFTDGNDALTGYASDDRIVGGMGDDVL----SGLA 1100
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
N + E ++ G T++ + + + G GND++ GN+ +++ + + GND+ D
Sbjct: 1101 GNDVVNGDEGSDTLYGGTGQDTLSGGSGSDYLYGEEGNDLLAGNAGSDILYGADGNDILD 1160
Query: 300 GSSGLDT----------------------------------------------FFYYAPS 313
G +G DT +Y S
Sbjct: 1161 GGTGNDTLDGGRGSDIYRFAKGYGQDSINNNSYGETATDKVDAIQLDGLNSADLRFYRSS 1220
Query: 314 YLYKIYRFENAIIVYDANEHKQD--FLSDVERLRFADQCI------------------DS 353
I + + QD V++LRFAD +
Sbjct: 1221 DDLVIQIKATGDTLTVRSHFSQDGVTAYAVDQLRFADGSVWGGAQIKAAVVQPSEEADTL 1280
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-------------- 399
L + L G DV + +G D
Sbjct: 1281 TGYASADSLSGLDGNDSLSGRAGDDVLDGGNGADTLYGEDGNDTLLGRAGNDSLNGGYGD 1340
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
D D L +GSD + + G + + + E L +
Sbjct: 1341 DVLDGGSGNDSLDGGYGSDTYVFRKGSGQDTISNGVYNEGTVGKQDVIRLEGLNLSDISL 1400
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY---ITHGVK 516
G F +Y + F + G +
Sbjct: 1401 RREYSDLIIQIKETGDTLRVSSHFSPSSTYYNYAIDQLQFADGTVWGVDQIKASLLTGGE 1460
Query: 517 EGRNPDAFKA---LEYIASHEDLINAFADAPDLVQAGKD 552
+ LE + ++ L + AG+D
Sbjct: 1461 FNDTLTGYDTDDILEGLVGNDTLSGGLGNDTLRGGAGRD 1499
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 55/421 (13%), Positives = 108/421 (25%), Gaps = 15/421 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + + D G G T + +
Sbjct: 2056 GEDGNDTLLGGAGNDSLSGGIGNDVLDGGAGNDTLDGGKGSDTYVFGKGYGRDTISNYAY 2115
Query: 136 HPGSYNGGYPVYGVDNDYENDSFL----TSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+ + + + E+ S V+ +++ S Y I +
Sbjct: 2116 NDTTVDKLDVIRLEGLTSEDVSIQRESDDLVIQINQTGETLRVNSHFYADQSYGYAINQL 2175
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Q G + + + +I DD + GG N I
Sbjct: 2176 QFANGI----VWDQAQITAALLIGAESDDSITGYASDDRV----SGGDGNDILSGRTGND 2227
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G T+ ++++G +GND + G N++ SGND DG G DT+ +
Sbjct: 2228 LLEGGRGKDTLNGEEGNDTLLGGAGNDTLNGGYGNDILDGGSGNDALDGGFGSDTYVFRR 2287
Query: 312 PSYLYKIYRFENAIIVYDANEH---KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ I + D + + SD+ R +D + + ++ +
Sbjct: 2288 GAGQDTISNYAYNDTTVDKLDVIHLEGLNASDILMRRESDDLVIQIKGTDETLRVTSHFS 2347
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+I G D + + + + Y
Sbjct: 2348 ASVIYGYGIDQVQFADGSILTNAQIKTALLTGTEVDESVVGYDSADRLLGLSGNDILYGR 2407
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G D L ++ L + G D + + S Y
Sbjct: 2408 QGDDFLDGGDGKDTLYGEDGNDTLQGGAGNDTLSGGYGNDLLDGGNGNDSLDGGYGSDTY 2467
Query: 489 L 489
+
Sbjct: 2468 V 2468
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 55/499 (11%), Positives = 125/499 (25%), Gaps = 27/499 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D + + + D G T+ + +G
Sbjct: 4353 GTDADETLAGTAISDSIDAGAGDDTVNGGSGDDTLSGSKGADTLNGEAGDDLLLGGMGND 4412
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + G + D F + Y + D V + ++
Sbjct: 4413 TLNGGLGNDILDGGAGNDRLDGGDGDDTYLFARGAGQDTVYYAYESRIGKLDTVKLTELN 4472
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG---GVKNYIDLNTESWSS 252
+ + + + ++ + D + ++ D +
Sbjct: 4473 AVDVSVRRDGSDLLILVLGSTDSLRVMSHFTNDATYGYQIDRIQFADGSFWDQSAIKNQV 4532
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + T++ + + +G+DV+ G + N+ ++G D +G G D
Sbjct: 4533 LQGSDADETLSGTGGNDVIDAGAGDDVINGAAGNDTLTGNAGADTLNGGEGND--VLLGG 4590
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + D L E D + + Y +YE+
Sbjct: 4591 AGNDSLSGGVGNDSL--DGGAGNDQLDGGE----GDDTYLFGKGAGQDTIYY--AYENRE 4642
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF--GSDRGAAARHYITHG 430
+ + +G D+ S + + + R G
Sbjct: 4643 GKLDTIKLTDLNASDVSVRRDGNDLIIRVLGSTDSLRVVYHFQSDAAGGYQIDRLVFADG 4702
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+ + L+ S E L + G D + + + + G
Sbjct: 4703 SVWDQTQIKSQVLQGSDSDETLSGTSGNDVISAGAGDDTVNGGSGNDTLSGGAGADMLNG 4762
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+ G+ D L+ A ++ L D L G
Sbjct: 4763 DAGNDLLQGGASNDTLY------------GGDGNDVLDGGAGNDQLNGGDGDDTYLFGKG 4810
Query: 551 KDHFSNFGYEEGRSITFNP 569
+ + E R +
Sbjct: 4811 AGQDTIYYANEARVGKLDT 4829
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 63/421 (14%), Positives = 110/421 (26%), Gaps = 15/421 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ T + D G G T + G
Sbjct: 2240 GEEGNDTLLGGAGNDTLNGGYGNDILDGGSGNDALDGGFGSDTYVFRRGA-------GQD 2292
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--IVAVQK 193
+Y + + S + D ++ G T V+ +V
Sbjct: 2293 TISNYAYNDTTVDKLDVIHLEGLNASDILMRRESDDLVIQIKGTDETLRVTSHFSASVIY 2352
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWS 251
YG + + Q K + T D G D D L+G N I +
Sbjct: 2353 GYGIDQVQFADGSILTNAQIKTALLTGTEVDESVVGYDSAD-RLLGLSGNDILYGRQGDD 2411
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + T+ +++ G +GND + G N++ +GND DG G DT+ +
Sbjct: 2412 FLDGGDGKDTLYGEDGNDTLQGGAGNDTLSGGYGNDLLDGGNGNDSLDGGYGSDTYVFRK 2471
Query: 312 PSYLYKIYRFENAIIVYDANEH---KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
S I + D + + SDV R +D + + ++ + Y
Sbjct: 2472 GSGQDIISNYAYNDTTVDKLDVIRLEGLNASDVVMRRESDDLVIQIKDSGETLRVGSHFY 2531
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
G D + + + + Y
Sbjct: 2532 PYANYGYGIDQVQFADGTVLTSAQIKTALLTGTEVDESVVGYDSADRLLGLSGNDILYGR 2591
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G D L ++ L+ G D + F S Y
Sbjct: 2592 QGDDVLDGGDGKDTLYGEEGNDTLLGGSGYDTLSGGYGNDLLDGGSGNDSLDGGFGSDTY 2651
Query: 489 L 489
+
Sbjct: 2652 V 2652
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 62/521 (11%), Positives = 125/521 (23%), Gaps = 47/521 (9%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D + + D G ++ ++ G
Sbjct: 870 TTDGNDNVWGYASDDILKGGAGADSLSGEAGNDALFGEDGNDSLYGGVGADQLSGGEGGD 929
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ +G + G + + + + + G D+ + +
Sbjct: 930 YLTGGDGNDTLLGDAGNDTLYGDSGNDLLEGGTGNDYLIGGEGS-------DVYRFNRGW 982
Query: 196 GAPKGSLGNNIYKIEV---QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G + ++ D + + +DL+ K I ++
Sbjct: 983 GQDSINNYDSSAGKTDAIEFAADILPVDIVVTRSYNDLVLSLKHSTDKVTISGYFQNDGD 1042
Query: 253 IGGYEKNMTIAQHT--VIESVVG------SSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + A T +E + + GND + G ++++ G+DV G +G
Sbjct: 1043 TPYTVEQIRFADGTHWNVEQIKSMAAFTFTDGNDALTGYASDDRIVGGMGDDVLSGLAGN 1102
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D +Y + + D+L E IL
Sbjct: 1103 D--VVNGDEGSDTLYGGTGQDTLSGGS--GSDYLYGEE------GNDLLAGNAGSDILYG 1152
Query: 365 TASYEDLIQVIGQDVFESMKHFY--EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L G D + + F G+D ++ + D + + +A
Sbjct: 1153 ADGNDILDGGTGNDTLDGGRGSDIYRFAKGYGQDSINNNSYGETATDKVDAIQLDGLNSA 1212
Query: 423 ARHY----------ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ I F A D + + K
Sbjct: 1213 DLRFYRSSDDLVIQIKATGDTLTVRSHFSQDGVTAYAVDQLRFADGSVWGGAQIKAAVVQ 1272
Query: 473 FGCEEGRFVTF---DSYLYLGSYDDLRNVFGSDR----GAAARHYITHGVKEGRNPDAFK 525
E + DS L D L G D A Y G
Sbjct: 1273 PSEEADTLTGYASADSLSGLDGNDSLSGRAGDDVLDGGNGADTLYGEDGNDTLLGRAGND 1332
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+L + L + G D + +I+
Sbjct: 1333 SLNGGYGDDVLDGGSGNDSLDGGYGSDTYVFRKGSGQDTIS 1373
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 67/413 (16%), Positives = 120/413 (29%), Gaps = 77/413 (18%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S+ S + S + D+ G GK T+ + + LG
Sbjct: 2912 SGSEGDDTVSGYDSADSLFGQSGNDVLSGRQGDDILDGGDGKDTLYGEDGDDTL---LGG 2968
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMS--YFMPQDSMMDASFGYCATPMVSDIVAVQ 192
+ +GGY +D NDS S Y + S D Y + V
Sbjct: 2969 TSSDTLSGGYGNDLLDGGSGNDSLDGGFGSDTYVFRKGSGQDTISNYAYNDTTVGKLDVI 3028
Query: 193 KIYGAPKGS------LGNNIYKIEVQQKD----SPFIQTIYDSGGDDLLDLTLIGGVKNY 242
++ G + + +I+ + S F + G D + G V N
Sbjct: 3029 RLEGLNVSDVVIRRESDDLVIQIKDSDETLRVSSHFYASAIYGYGIDQIQFA-DGVVWNK 3087
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
DLN + + +TI E++ G +G+D + GN +++ +GND DG
Sbjct: 3088 DDLNANLSTVVPVSS--LTITGTEANETLTGGAGHDTLYGNGGDDILEGGAGNDRLDGGY 3145
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYD-----------------------ANEHKQDFLS 339
G DT+ + S + ++ D + D L
Sbjct: 3146 GNDTYVFGKGSGQDTVLAYDPVSTRVDVVKLTGLNSSDVVITRESSDLLIRVKGATDTLR 3205
Query: 340 -------------DVERLRFADQCI------------------DSVNVKQRSILEYTASY 368
+ ++FAD + +++ +
Sbjct: 3206 VSNHFINDSTYGYQINHIQFADGDVLSLAAINALVLQSSNADETLTGFASDDVIDGSGGD 3265
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ L G D +G D+ GS +D+ N +
Sbjct: 3266 DTLNGAAGNDSLSGGTGSDTLNGEDGNDLLQG-----GSGNDVLNGGAGNDVL 3313
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/440 (15%), Positives = 117/440 (26%), Gaps = 79/440 (17%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY--GIGKGTILSHNALHEIGHALG 133
+ T + +D + Y G G+ TI +++ H L
Sbjct: 1881 GGLGNDTLNGGAGNDTLDGGAGNDSLEGGKGSDTYIYRKGSGQDTISNYSYNDLTAHKLD 1940
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
++ N ++D + + + +D S+GY I +Q
Sbjct: 1941 VVRLEGLNTSDVSIRRESDDLLIQIRQTGETLRISSHFTVDQSYGYA-------INQLQF 1993
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G+L + + +I D L G V N I +
Sbjct: 1994 ----ADGTLWDEAQITAALLIGTESDDSITGYASGDKL----SGLVGNDILSGRGGDDVL 2045
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + T+ ++++G +GND + G N+V +GND DG G DT+ +
Sbjct: 2046 DGGDGKDTLNGEDGNDTLLGGAGNDSLSGGIGNDVLDGGAGNDTLDGGKGSDTYVFGKGY 2105
Query: 314 YLYKIYRFENAIIVYDANE---------------------------------------HK 334
I + D +
Sbjct: 2106 GRDTISNYAYNDTTVDKLDVIRLEGLTSEDVSIQRESDDLVIQINQTGETLRVNSHFYAD 2165
Query: 335 QDFLSDVERLRFADQ------------------CIDSVNVKQRSILEYTASYEDLIQVIG 376
Q + + +L+FA+ + + L G
Sbjct: 2166 QSYGYAINQLQFANGIVWDQAQITAALLIGAESDDSITGYASDDRVSGGDGNDILSGRTG 2225
Query: 377 QDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
D+ E + EG D D+ D L G+D T+
Sbjct: 2226 NDLLEGGRGKDTLNGEEGNDTLLGGAGNDTLNGGYGNDILDGGSGNDALDGGFGSDTYVF 2285
Query: 432 KEGRNPDAFKALEYIASHED 451
+ G D Y + D
Sbjct: 2286 RRGAGQDTISNYAYNDTTVD 2305
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 59/472 (12%), Positives = 115/472 (24%), Gaps = 100/472 (21%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ + DV G G T+ + + G
Sbjct: 1279 TLTGYASADSLSGLDGNDSLSGRAGDDVLDGGNGADTLYGEDGNDTLLGRAGNDSLNGGY 1338
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC--ATPMVSDIVAVQKIYGAPK 199
G + G + D S F S G T D++ ++ + +
Sbjct: 1339 GDDVLDGGSGNDSLDGGYGSDTYVFRKGSGQDTISNGVYNEGTVGKQDVIRLEGLNLSDI 1398
Query: 200 G-------------SLGNNIYKIEVQQKDSPFIQTIYDSG--------GDDLLDLTLIGG 238
G+ + S + D G D + +L+ G
Sbjct: 1399 SLRREYSDLIIQIKETGDTLRVSSHFSPSSTYYNYAIDQLQFADGTVWGVDQIKASLLTG 1458
Query: 239 VKNYIDLNTE----------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ L ++ G N T+ +++ G G D ++G + N+
Sbjct: 1459 GEFNDTLTGYDTDDILEGLVGNDTLSGGLGNDTLRGGAGRDTLYGDDGADTLLGGADNDS 1518
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS--------- 339
+G+DV DG +G DT S Y + + + +++ +
Sbjct: 1519 LAGGNGDDVLDGGTGNDTLEGGKGSDTYIFAKGAGSDAIDNSSYNDITANKLDVVRLDGL 1578
Query: 340 ----------------------------------------DVERLRFADQCIDSVNVKQR 359
+++L+FAD I
Sbjct: 1579 NSEDVSLRRESDDLIVQVRQTGESLRIRSHFASDSGSWSYAIDQLKFADGTIWDRAHITA 1638
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
++L+ T + + D + G D+ G D N D
Sbjct: 1639 ALLDGTDGNDTITGYDTADTLSGLAGNDTLNGRNGNDLL-----DGGDGKDSLNGEAGDD 1693
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
L ++ L + +G D +
Sbjct: 1694 FLL-------------GGAGNDTLSGGEGNDTLDGGTGNDSLEGGIGSDTYI 1732
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 59/474 (12%), Positives = 110/474 (23%), Gaps = 62/474 (13%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
S+ + D G G T+ + + G
Sbjct: 3243 SSNADETLTGFASDDVIDGSGGDDTLNGAAGNDSLSGGTGSDTLNGEDGNDLLQGGSGND 3302
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + G + D + F + A D + + +
Sbjct: 3303 VLNGGAGNDVLDGGAGNDRLDGGAGDDIYLFGKGSGQDVIYYANEARTGKVDTIQLVGLN 3362
Query: 196 GAP----------------KGSLGNNIYKIEVQQKDSPFIQTIYDSGGD----------- 228
+Y I I + G+
Sbjct: 3363 AGDISISRAGYDLVLRVNGTTDSLRVVYHFLSDATSGYQIDRIQFADGNIWGQETIKSLA 3422
Query: 229 ---DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ------------------HTV 267
D L G + + ++ G N + +
Sbjct: 3423 LQGTDADQYLEGYGTDDLIEAGAGDDTVYGAAGNDKLFGNSGDDVVNGDDGDDLVQGGSG 3482
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G +GNDV+ G + N++ +GND+ DG +G D A Y + +
Sbjct: 3483 NDTLNGGAGNDVLDGGTGNDILNGGAGNDLLDGGAGNDRLDGGAGDDTYLFGKGSGQDTI 3542
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI---GQDVFESMK 384
Y ANE + + ++ + I ++ + + L V G
Sbjct: 3543 YYANETRAGKVDTIQLVGLGAADISVSRDGSDLVIRVNGTTDSLRVVYHFAGDATSGYQI 3602
Query: 385 HFYEFGLSEGRD---------ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
+F D D+ YL Y + G G +
Sbjct: 3603 DRIQFADGSAWDQEAIKSQVLQGSDADQYLAGYATDDLIDGGAGDDTIV--GGAGNDKLA 3660
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
L ++ L + G D + YL
Sbjct: 3661 GGAGADTLSGDEGNDLLQGGSGNDTLTGGAGDDVLDGAAGNDRLDGGAGDDTYL 3714
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 60/500 (12%), Positives = 117/500 (23%), Gaps = 44/500 (8%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
SD + + + D G G ++ + G
Sbjct: 3990 SDAAQVLTGFASDDLIDGGADDDTLYGGAGQDRLLGGDGADSLNGDEGDDYLNGGAGNDS 4049
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+G + G + D F + + D V + +
Sbjct: 4050 LAGGSGNDVLDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYYANESRAGKVDQVKLVDLNA 4109
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A + + + ++ +Y GD + + I +
Sbjct: 4110 ADVSVARDGYDLVIRILGTTDTLRVVYHFMGDATAGYQI-----DRIAFADGGFWDQTAI 4164
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + + E++ G+ +DV+ + ++ SGND G SG DT
Sbjct: 4165 KAQV-LQGTEADETLSGTGSDDVIYAAAGDDSVNGGSGNDTLSGGSGADTL--------- 4214
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
E D L+ D L+ A + L G
Sbjct: 4215 -------------NGEDGNDVLNG------GDGKDSLYGGNGNDQLDGGAGNDMLDGGNG 4255
Query: 377 QDVFESMKHFYE---FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
D + K + + EGR D+ + +V D +
Sbjct: 4256 DDTYLFGKGSGQDSIYYAYEGRADKLDTVKLIDLNAADVSVR-RDGNDLLIRVLGTTDSL 4314
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
Y + + A ++ + + +E T S
Sbjct: 4315 RVVAHFTNDATYGYQVDRIQFADGNSWNQASIKSAVLQGTDADETLAGTAISDSIDAGAG 4374
Query: 494 DLRNVFGSDRGA------AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
D GS A G L ++ L +
Sbjct: 4375 DDTVNGGSGDDTLSGSKGADTLNGEAGDDLLLGGMGNDTLNGGLGNDILDGGAGNDRLDG 4434
Query: 548 QAGKDHFSNFGYEEGRSITF 567
G D + ++ +
Sbjct: 4435 GDGDDTYLFARGAGQDTVYY 4454
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/260 (16%), Positives = 77/260 (29%), Gaps = 11/260 (4%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT----ILSHNALHEIGH 130
D K + + + D G G + I S + G
Sbjct: 1678 DGGDGKDSLNGEAGDDFLLGGAGNDTLSGGEGNDTLDGGTGNDSLEGGIGSDTYIFRKGS 1737
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+++ +YN P E + +S D ++ T VS A
Sbjct: 1738 GQDIVYNYAYNESTPNKLDVVRLEGLTAED--VSIRRESDDLVIQIRQTGETLRVSSHFA 1795
Query: 191 VQKIYGAPKG---SLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLN 246
V + YG ++ DS G D + ++
Sbjct: 1796 VDQTYGYAINQLQFADGTVWDQAKITSALLIGTEGSDSIIGYATADELAGLEGDDVLNGR 1855
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G E T+ ++++G GND + G + N+ +GND +G G DT
Sbjct: 1856 AG-DDLLSGGEGRDTLNGEDGADTLLGGLGNDTLNGGAGNDTLDGGAGNDSLEGGKGSDT 1914
Query: 307 FFYYAPSYLYKIYRFENAII 326
+ Y S I + +
Sbjct: 1915 YIYRKGSGQDTISNYSYNDL 1934
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 70/511 (13%), Positives = 131/511 (25%), Gaps = 55/511 (10%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+D + +D AD G T+ N + G
Sbjct: 1626 ADGTIWDRAHITAALLDGTDGNDTITGYDTADTLSGLAGNDTLNGRNGNDLLDGGDGKDS 1685
Query: 137 PGSYNGGYPVYGVDNDYENDSFL-TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + G + + DS+ + Y
Sbjct: 1686 LNGEAGDDFLLGGAGNDTLSGGEGNDTLDGGTGNDSLEGGIGSDTYIFRKGSGQDIVYNY 1745
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ + V+ + DDL+ G + + + G
Sbjct: 1746 AYNESTPNKLDV---VRLEGLTAEDVSIRRESDDLVIQIRQTGETLRVSSHFAVDQTYGY 1802
Query: 256 YEKNMTIAQHTVIESV-------VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ A TV + +G+ G+D +IG + + G+DV +G +G D
Sbjct: 1803 AINQLQFADGTVWDQAKITSALLIGTEGSDSIIGYATADELAGLEGDDVLNGRAGDD--- 1859
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ +D L+ D + L A
Sbjct: 1860 -------------------LLSGGEGRDTLNG------EDGADTLLGGLGNDTLNGGAGN 1894
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L G D E K + +G D+ D + R
Sbjct: 1895 DTLDGGAGNDSLEGGKGSDTYIYRKGS--GQDTISNYSYNDLTAHKLDVVRLEGLNTSDV 1952
Query: 429 HGVKEGRN----PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--- 481
+E + I+SH + ++ A + +Q + +
Sbjct: 1953 SIRRESDDLLIQIRQTGETLRISSHFTVDQSYGYAINQLQFADGTLWDEAQITAALLIGT 2012
Query: 482 -TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP----DAFKALEYIASHEDL 536
+ DS S D L + G+D + +G++ D L A ++ L
Sbjct: 2013 ESDDSITGYASGDKLSGLVGNDILSGRGGDDVLDGGDGKDTLNGEDGNDTLLGGAGNDSL 2072
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
+ AG D + G + + F
Sbjct: 2073 SGGIGNDVLDGGAGND--TLDGGKGSDTYVF 2101
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 66/543 (12%), Positives = 129/543 (23%), Gaps = 90/543 (16%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
T D G G T + G +Y+ G
Sbjct: 2788 DTLSGGDGNDTLDGGAGNDSLDGGYGSDTYVFRKGS-------GQDTINNYSYNDTTVGK 2840
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--IVAVQKIYGAPKGSLGNNIY 207
+ + S ++ D ++ T VS YG + +
Sbjct: 2841 LDVIRLEGLNASDVAMRRESDDLIIQIKDSGETLRVSSHFYPYANYGYGIDQVQFADGSV 2900
Query: 208 KIEVQQKDSPFIQTIYDS--GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
Q + + + D G D D +L G N + + + G + T+
Sbjct: 2901 LTNAQIRSAMLSGSEGDDTVSGYDSAD-SLFGQSGNDVLSGRQGDDILDGGDGKDTLYGE 2959
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++++G + +D + G N++ SGND DG G DT+ + S I +
Sbjct: 2960 DGDDTLLGGTSSDTLSGGYGNDLLDGGSGNDSLDGGFGSDTYVFRKGSGQDTISNYAYND 3019
Query: 326 IVYDANE---------------------------------------HKQDFLSDVERLRF 346
+ + +++++F
Sbjct: 3020 TTVGKLDVIRLEGLNVSDVVIRRESDDLVIQIKDSDETLRVSSHFYASAIYGYGIDQIQF 3079
Query: 347 ADQCI-------------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
AD + + L A ++ L G D+ E
Sbjct: 3080 ADGVVWNKDDLNANLSTVVPVSSLTITGTEANETLTGGAGHDTLYGNGGDDILEGGAGND 3139
Query: 388 EFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN------- 436
G D + +YD + + +E +
Sbjct: 3140 RLDGGYGNDTYVFGKGSGQDTVLAYDPVSTRVDVVKLTGLNSSDVVITRESSDLLIRVKG 3199
Query: 437 -------PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+ F + I + + F S +
Sbjct: 3200 ATDTLRVSNHFINDSTYGYQINHIQFADGDVLSLAAINALVLQSSNADETLTGFASDDVI 3259
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
+ G+ + G D L+ + ++ L + A
Sbjct: 3260 DGSGGDDTLNGAAGNDSLS--GGTGSDTLNGEDGNDLLQGGSGNDVLNGGAGNDVLDGGA 3317
Query: 550 GKD 552
G D
Sbjct: 3318 GND 3320
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/345 (14%), Positives = 88/345 (25%), Gaps = 36/345 (10%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV-------VGSSGNDVV 280
DDL+ G ++ + + S G + A V + +G+ +D +
Sbjct: 2143 DDLVIQINQTGETLRVNSHFYADQSYGYAINQLQFANGIVWDQAQITAALLIGAESDDSI 2202
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G ++++ GND+ G +G D + E + D L+
Sbjct: 2203 TGYASDDRVSGGDGNDILSGRTGND--LLEGGRGKDTLNGEEGNDTLLGG--AGNDTLNG 2258
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDIT 398
IL+ + + L G D F D T
Sbjct: 2259 ---------------GYGNDILDGGSGNDALDGGFGSDTYVFRRGAGQDTISNYAYNDTT 2303
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
D + + R + G E + + I + FAD
Sbjct: 2304 VDKLDVIHLEGLNASDILMRRESDDLVIQIKGTDETLRVTSHFSASVIYGYGIDQVQFAD 2363
Query: 459 APDLVQVGKDHFSNFGCE-EGRFVTFDSYLYLGS-------YDDLRNVFGSDRGAAARHY 510
L G E + V +DS L Y + F Y
Sbjct: 2364 GSILTNAQIKTALLTGTEVDESVVGYDSADRLLGLSGNDILYGRQGDDFLDGGDGKDTLY 2423
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G + L ++ L + G D +
Sbjct: 2424 GEDGNDTLQGGAGNDTLSGGYGNDLLDGGNGNDSLDGGYGSDTYV 2468
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 66/524 (12%), Positives = 113/524 (21%), Gaps = 71/524 (13%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+D + +D D+ +G T+ + G
Sbjct: 1441 ADGTVWGVDQIKASLLTGGEFNDTLTGYDTDDILEGLVGNDTLSGGLGNDTLRGGAGRDT 1500
Query: 137 PGSYNGGYPVYGV-DNDYENDSFLTSVMSYFMPQDS--MMDASFGYCATPMVSDIVAVQK 193
+G + G DND V+ D+ S Y
Sbjct: 1501 LYGDDGADTLLGGADNDSLAGGNGDDVLDGGTGNDTLEGGKGSDTYIFAKGAGSDAIDNS 1560
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-S 252
Y + + + + +D + DDL+ G I + S S S
Sbjct: 1561 SYNDITANKLDVVRLDGLNSEDVSLRRES-----DDLIVQVRQTGESLRIRSHFASDSGS 1615
Query: 253 IGGYEKNMTIAQHTVIESV-------VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ A T+ + G+ GND + G + +GND +G +G D
Sbjct: 1616 WSYAIDQLKFADGTIWDRAHITAALLDGTDGNDTITGYDTADTLSGLAGNDTLNGRNGND 1675
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+D L+ + L
Sbjct: 1676 ----------------------LLDGGDGKDSLNG------EAGDDFLLGGAGNDTLSGG 1707
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN------------ 413
+ L G D E + +G Y Y +
Sbjct: 1708 EGNDTLDGGTGNDSLEGGIGSDTYIFRKGSGQDI-VYNYAYNESTPNKLDVVRLEGLTAE 1766
Query: 414 --VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL--------- 462
+ G + Y + L A D
Sbjct: 1767 DVSIRRESDDLVIQIRQTGETLRVSSHFAVDQTYGYAINQLQFADGTVWDQAKITSALLI 1826
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
G D + + + G D G R G
Sbjct: 1827 GTEGSDSIIGYATADELAGLEGDDVLNGRAGDDLLSGGEGRDTLN---GEDGADTLLGGL 1883
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
L A ++ L + G D + +I+
Sbjct: 1884 GNDTLNGGAGNDTLDGGAGNDSLEGGKGSDTYIYRKGSGQDTIS 1927
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 65/492 (13%), Positives = 116/492 (23%), Gaps = 42/492 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ D+ G G+ T+ + + LG G
Sbjct: 1836 GYATADELAGLEGDDVLNGRAGDDLLSGGEGRDTLNGEDGADTLLGGLGNDTLNGGAGND 1895
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ G + + S +Y + S D Y + + + V ++ G +
Sbjct: 1896 TLDGGAGNDSLEGGKGSD-TYIYRKGSGQDTISNYSYNDLTAHKLDVVRLEGLNTSDVS- 1953
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
DDLL G I + S G + A
Sbjct: 1954 ------------------IRRESDDLLIQIRQTGETLRISSHFTVDQSYGYAINQLQFAD 1995
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T+ + ++ ++IG +++ + D G G D
Sbjct: 1996 GTLWDEAQITA--ALLIGTESDDSITGYASGDKLSGLVGNDIL----SGRGGDDVLDGGD 2049
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E D L +L+ A + L G D + K
Sbjct: 2050 GKDTLNGEDGNDTLLG------GAGNDSLSGGIGNDVLDGGAGNDTLDGGKGSDTYVFGK 2103
Query: 385 HF--YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA--AARHYITHGVKEGRNPDAF 440
+ D T D + R + G N +
Sbjct: 2104 GYGRDTISNYAYNDTTVDKLDVIRLEGLTSEDVSIQRESDDLVIQINQTGETLRVNSHFY 2163
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNV 498
Y + L A D Q+ ++ + D D L
Sbjct: 2164 ADQSYGYAINQLQFANGIVWDQAQITAALLIGAESDDSITGYASDDRVSGGDGNDILSGR 2223
Query: 499 FGSDRGAAARHYITHGVKEGRN----PDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
G+D R T +EG + L ++ L + G D +
Sbjct: 2224 TGNDLLEGGRGKDTLNGEEGNDTLLGGAGNDTLNGGYGNDILDGGSGNDALDGGFGSDTY 2283
Query: 555 SNFGYEEGRSIT 566
+I+
Sbjct: 2284 VFRRGAGQDTIS 2295
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 57/482 (11%), Positives = 105/482 (21%), Gaps = 41/482 (8%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
++ + + D+ G GK T+ + G
Sbjct: 2195 GAESDDSITGYASDDRVSGGDGNDILSGRTGNDLLEGGRGKDTLNGEEGNDTLLGGAGND 2254
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + G + D +Y + + D Y D + V +
Sbjct: 2255 TLNGGYGNDILDGGSGNDALD-GGFGSDTYVFRRGAGQDTISNYAYNDTTVDKLDVIHLE 2313
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + G D + I +
Sbjct: 2314 GLNAS----------DILMRRESDDLVIQIKGTDETLRVTSHFSASVI----YGYGIDQV 2359
Query: 256 YEKNMTIAQHTVIESV--VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ +I + I++ G+ ++ V+G + + SGND+ G
Sbjct: 2360 QFADGSILTNAQIKTALLTGTEVDESVVGYDSADRLLGLSGNDILYG------------- 2406
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ E D L +L+ + L
Sbjct: 2407 RQGDDFLDGGDGKDTLYGEDGNDTLQG------GAGNDTLSGGYGNDLLDGGNGNDSLDG 2460
Query: 374 VIGQDV--FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D F D T D + + R +
Sbjct: 2461 GYGSDTYVFRKGSGQDIISNYAYNDTTVDKLDVIRLEGLNASDVVMRRESDDLVIQIKDS 2520
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE-EGRFVTFDSYLYLG 490
E + + FAD L G E + V +DS L
Sbjct: 2521 GETLRVGSHFYPYANYGYGIDQVQFADGTVLTSAQIKTALLTGTEVDESVVGYDSADRLL 2580
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
++G G L + ++ L + + +G
Sbjct: 2581 GLSGNDILYGRQGDDVLDGGDGKDTLYGEE--GNDTLLGGSGYDTLSGGYGNDLLDGGSG 2638
Query: 551 KD 552
D
Sbjct: 2639 ND 2640
>gi|4996355|dbj|BAA78420.1| membrane-type-3 matrix metalloproteinase [Mus musculus]
Length = 607
Score = 77.1 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 58/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P + R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRRAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|304394846|ref|ZP_07376732.1| hemolysin-type calcium-binding region [Ahrensia sp. R2A130]
gi|303293037|gb|EFL87451.1| hemolysin-type calcium-binding region [Ahrensia sp. R2A130]
Length = 1094
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/294 (15%), Positives = 82/294 (27%), Gaps = 21/294 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI------DLNTESWSSIGGYEKNMT 261
I V I T+ D +++ + G Y + E++S+ G
Sbjct: 571 FIPVDLDGGGGINTLVHKSAPDSIEVNFLAGNITYEFIAASNNYRFENFSNFTGGSGREV 630
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + GND + GN N++ +G DV G G D Y + +
Sbjct: 631 VIGDNSANVISTGGGNDEIDGNGGNDMINGGTGEDVMRGGQGDD--GYTVDNISDSVIEE 688
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ +VE L A I+++ L + L G D
Sbjct: 689 AGEGYDTVTSFISLTIPVNVESLVLAGTANINAMGSAGSEQLTGNSGNNTLEGGEGNDTM 748
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
G FD+ Y + + + +
Sbjct: 749 TGGNGMDLINGGGG----FDTVDYSQETGTQGVNIDLRTNSGTDTFGS------TDTLDS 798
Query: 441 KALEYIASHEDLI--NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+S+ D+I +A + G+D G + D+ Y+
Sbjct: 799 IERVIGSSNNDIIFGSAAGGQVLMGMAGEDQLIGMGGGDELHGGADNDYYVIEN 852
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 50/388 (12%), Positives = 110/388 (28%), Gaps = 20/388 (5%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
S + + E + + + +S + D G G I
Sbjct: 701 SLTIPVNVESLVLAGTANINAMGSAGSEQLTGNSGNNTLEGGEGNDTMTGGNGMDLINGG 760
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
+ ++ G G D D+ + + ++ S
Sbjct: 761 GGFDTVDYSQETGTQGVNIDLRTNSGTDTFGSTDTLDSIERVIGSSNNDIIFGSAAGGQV 820
Query: 183 PM-VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
M ++ + + G + G + ++ I+ + GDD+LD + V
Sbjct: 821 LMGMAGEDQLIGMGGGDELHGGADNDYYVIENAADTVIELV--GEGDDILDTFISYNVPV 878
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
++ + Q T GS+ D++ GNS NN + G D+ G
Sbjct: 879 NVE---------------VLRMQGTADLESNGSASRDIIQGNSGNNYINGAGGIDLMIGG 923
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G D + ++Y + ++ ++E + + +
Sbjct: 924 DGNDVYSIDNSQDTVIEAVGGGDDVIYTSVDYVLLGDQEIETAILTENAVILRGDDSNNQ 983
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L L G D + F +S+ + G ++ + G
Sbjct: 984 LIGNDFVNVLEGKGGTDYLLGLGGDDIFQVSK--EANATDLDVFGDFEGAGVIGGDRIAL 1041
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASH 449
+A + G+ + +F ++
Sbjct: 1042 SAAEWGMDGIVYQVSQTSFIVATAQNTN 1069
>gi|329114944|ref|ZP_08243700.1| Hypothetical protein APO_1748 [Acetobacter pomorum DM001]
gi|326695841|gb|EGE47526.1| Hypothetical protein APO_1748 [Acetobacter pomorum DM001]
Length = 174
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLY 572
KE R F + Y+ ++ D+ A P +HF ++G +EGR+ F+ Y
Sbjct: 92 EKERRAAIFFDSQWYLNAYPDIREA-GVDPL------EHFLDYGAKEGRNPNALFDSLSY 144
Query: 573 LTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
L D+ FG HYI +G +EGR
Sbjct: 145 LRVNPDVAG-FGPG---PFIHYICYGFQEGR 171
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FDS YL +Y D+R H++ +G KEGRNP+A F +L Y+ + D+ F
Sbjct: 101 FDSQWYLNAYPDIREAG----VDPLEHFLDYGAKEGRNPNALFDSLSYLRVNPDV-AGFG 155
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
P + H+ +G++EGR
Sbjct: 156 PGPFI------HYICYGFQEGR 171
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
I FDS YL +Y D+R H++ +G KEGRNP+A F +L Y+ + D+
Sbjct: 99 IFFDSQWYLNAYPDIREA----GVDPLEHFLDYGAKEGRNPNALFDSLSYLRVNPDVAGF 154
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
H+ +G +EGR
Sbjct: 155 GPGP-------FIHYICYGFQEGR 171
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDS 485
KE R F + Y+ ++ D+ A D +HF ++G +EGR FDS
Sbjct: 89 QEAEKERRAAIFFDSQWYLNAYPDIREAGVDP-------LEHFLDYGAKEGRNPNALFDS 141
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
YL D+ FG HYI +G +EGR
Sbjct: 142 LSYLRVNPDVAG-FGPGP---FIHYICYGFQEGRPL 173
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
I F+ YL +Y D+ +H++ +G KEGR
Sbjct: 99 IFFDSQWYLNAYPDIREA----GVDPLEHFLDYGAKEGRN 134
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
Y +Y D I+ G D +HF ++G EGR+ FDS YL D+
Sbjct: 98 AIFFDSQWYLNAYPD-IREAGVDPL---EHFLDYGAKEGRNPNALFDSLSYLRVNPDV-A 152
Query: 414 VFGSDRGAAARHYITHGVKEGRN 436
FG HYI +G +EGR
Sbjct: 153 GFGPG---PFIHYICYGFQEGRP 172
>gi|258541342|ref|YP_003186775.1| hypothetical protein APA01_02430 [Acetobacter pasteurianus IFO
3283-01]
gi|256632420|dbj|BAH98395.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256635477|dbj|BAI01446.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256638532|dbj|BAI04494.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256641586|dbj|BAI07541.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256644641|dbj|BAI10589.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256647696|dbj|BAI13637.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256650749|dbj|BAI16683.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653740|dbj|BAI19667.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 159
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLY 572
KE R F + Y+ ++ D+ A P +HF ++G +EGR+ F+ Y
Sbjct: 77 EKERRAAIFFDSQWYLNAYPDIREA-GVDPL------EHFLDYGAKEGRNPNALFDSLSY 129
Query: 573 LTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
L D+ FG HYI +G +EGR
Sbjct: 130 LRVNPDVAG-FGPG---PFIHYICYGFQEGR 156
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FDS YL +Y D+R H++ +G KEGRNP+A F +L Y+ + D+ F
Sbjct: 86 FDSQWYLNAYPDIREAG----VDPLEHFLDYGAKEGRNPNALFDSLSYLRVNPDV-AGFG 140
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
P + H+ +G++EGR
Sbjct: 141 PGPFI------HYICYGFQEGR 156
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
I FDS YL +Y D+R H++ +G KEGRNP+A F +L Y+ + D+
Sbjct: 84 IFFDSQWYLNAYPDIREA----GVDPLEHFLDYGAKEGRNPNALFDSLSYLRVNPDVAGF 139
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
H+ +G +EGR
Sbjct: 140 GPGP-------FIHYICYGFQEGR 156
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDS 485
KE R F + Y+ ++ D+ A D +HF ++G +EGR FDS
Sbjct: 74 QEAEKERRAAIFFDSQWYLNAYPDIREAGVDP-------LEHFLDYGAKEGRNPNALFDS 126
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
YL D+ FG HYI +G +EGR
Sbjct: 127 LSYLRVNPDVAG-FGPGP---FIHYICYGFQEGRPL 158
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
I F+ YL +Y D+ +H++ +G KEGR
Sbjct: 84 IFFDSQWYLNAYPDIREA----GVDPLEHFLDYGAKEGRN 119
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
Y +Y D I+ G D +HF ++G EGR+ FDS YL D+
Sbjct: 83 AIFFDSQWYLNAYPD-IREAGVDPL---EHFLDYGAKEGRNPNALFDSLSYLRVNPDV-A 137
Query: 414 VFGSDRGAAARHYITHGVKEGRN 436
FG HYI +G +EGR
Sbjct: 138 GFGPG---PFIHYICYGFQEGRP 157
>gi|330942422|gb|EGH45029.1| putative hemolysin-type calcium-binding region [Pseudomonas syringae
pv. pisi str. 1704B]
Length = 1095
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/299 (12%), Positives = 81/299 (27%), Gaps = 12/299 (4%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S +D ++G+S N+ G D G G D + + +
Sbjct: 712 HIFGTSDDDTLVGSSGNDTLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTV 771
Query: 330 ANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ +++E L I+ ++++ AS L G D+
Sbjct: 772 VSSVSWTLGANLENLLLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTGGDGSDS 831
Query: 389 FGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRGAAARH---YITHGVKEGRNPDAFKAL 443
+ + + R + ++ +G D + + S A + G +
Sbjct: 832 YYVDDAADRVVETNADAKVGGVDTVYSSLASYTLGANLENIVINSSGAANATGNALDNLI 891
Query: 444 EYIASHEDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
A + + + L ++L +D
Sbjct: 892 YAGAGDNVMDGRGGNDTVSYLFATAGVTVALNTSAQQATGGSGLDTLKGTENLIGSQFAD 951
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
++ T L A + LI + G DH+ G +
Sbjct: 952 TLTGNKNANTLS-----GGAGNDTLSGGAGDDVLIGGSGADTLIGGTGADHYVFNGISD 1005
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 43/326 (13%), Positives = 88/326 (26%), Gaps = 14/326 (4%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G T+ + + G++G D + G + + + D G +G D F Y +
Sbjct: 18 VVEGTAGGDTLTGTDGNDVLNGNAGTDRIDGGAGADTITGGADADTLTGGAGADLFIYNS 77
Query: 312 PSYLYKIYRFENA----IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y+ Y I + LS + D +++ + + T
Sbjct: 78 RLDSYRNYTASGTKQSDTITDFNPAEDRIDLSSIGLRGLGDGSANTIYLSVNADGSKTYI 137
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
D + G +++ LS F + L + +
Sbjct: 138 KTDAVDSTGNRFEIALQGNLADKLSASN-FLFSTAAAANQAPVLNTPLMDQNITELKAFS 196
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFA----DAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ L Y A+ D D+ L G + G
Sbjct: 197 YAVQPGSFSDPDSNTLTYSATLADNSALPDWLKFDSKTLTFSGTPGGTASGLYSVLLTAS 256
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
D+ + NV G + + + + + L
Sbjct: 257 DATGASVADSFAINVGNVTPGILTGTEN---AEALYGTEGNDTILGLGGDDTLRGDTGAD 313
Query: 544 PDLVQAGKDHFSNFGYEEGRSITFNP 569
AG+D + +G +G + ++
Sbjct: 314 IINGGAGRD--ALYGGADGDTFVYSA 337
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 83/283 (29%), Gaps = 23/283 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE N + + S + E + + N
Sbjct: 747 DIYVVDNAFDTVTESNDS-PSQVDTVVSSVSWTLGANLENLLLTGVSAINGTGNAVKNVI 805
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ + AD+ G G + +A +
Sbjct: 806 IGNASNNILDGAAGADMLTGGDGSDSYYVDDAA---------------DRVVETNADAKV 850
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ +S+ SY + + A + + GA G+N+ + +
Sbjct: 851 GGVDTVYSSLASYTLGANLENIVINSSGAANATGNALDNLIYAGA-----GDNVM--DGR 903
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ +G L+ + + ++ G + T+ + ++
Sbjct: 904 GGNDTVSYLFATAGVTVALNTSAQQATGGSGLDTLKGTENLIGSQFADTLTGNKNANTLS 963
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
G +GND + G + ++V SG D G +G D + + S
Sbjct: 964 GGAGNDTLSGGAGDDVLIGGSGADTLIGGTGADHYVFNGISDT 1006
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 5/149 (3%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ D + S + K + + SG +L
Sbjct: 201 PGSFSDPDSNTLTYSATLADNSALPDWLKFDSKTLTFSGTPGGTASGLYSVLLTASDATG 260
Query: 240 KNY-----IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ I++ + + G E + ++++G G+D + G++ ++ +G
Sbjct: 261 ASVADSFAINVGNVTPGILTGTENAEALYGTEGNDTILGLGGDDTLRGDTGADIINGGAG 320
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
D G + DTF Y A + Y+ Y
Sbjct: 321 RDALYGGADGDTFVYSALTDSYRDYDAGG 349
>gi|255261462|ref|ZP_05340804.1| S-layer-RTX protein [Thalassiobium sp. R2A62]
gi|255103797|gb|EET46471.1| S-layer-RTX protein [Thalassiobium sp. R2A62]
Length = 643
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 51/351 (14%), Positives = 92/351 (26%), Gaps = 31/351 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + TIY GDD + G + I G +A + +
Sbjct: 137 DEFLSGTGRSDTIYGRDGDDRI----YGRQSDDTLFGGAGDDFISGGGGADLVAGGSGDD 192
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G++GND ++GN+ ++ F GND+ G DT +IY +V+
Sbjct: 193 VLKGNNGNDTLMGNAGDDSLFGGDGNDLLCAGEGDDTV--SGGKGADRIYADNGNDLVHG 250
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D + L + +++L G D + +
Sbjct: 251 G-----------------DGEDEIHGGNGDDELYGDSGHDELHGNSGDDSLIGGQGNDKL 293
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+G D F + A R Y G D L +
Sbjct: 294 RGDDGDDRLFGGRGKDLLIGRAGDDALMGGNDADRLYGGEGDDALYGCDGSDFLCGGTGN 353
Query: 450 EDLINAFADAPDLVQVGKD--------HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
++L + +G D + G + + +
Sbjct: 354 DELRGGGGADRIIGGLGNDLVDGGRGNDIISTGHVIETDADGTVGIPNLGFPGILPDDTD 413
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
Y G D + ++ + F D G D
Sbjct: 414 PNDDKDTVYAGAGHDRITTGDDDDIIYAGHGNDIVDAGFDDDFVSGGRGAD 464
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 42/138 (30%), Gaps = 8/138 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIG--------GVKNYIDLNTESWSSIGGYEKNM 260
K TIY G D D + I +I G + N
Sbjct: 471 GSDFVKGGTGNDTIYGGLGPDRPDSLNVPDDEGDPIPNNGLDILYGNAGNDTIYGADDND 530
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + +++ G +D+V G +++ G+D G G DTF + A I
Sbjct: 531 EIYGDSGNDTLDGGIDDDLVNGGRGDDLIIGGQGDDTLFGGKGADTFGFAAGDGSDVITD 590
Query: 321 FENAIIVYDANEHKQDFL 338
F D L
Sbjct: 591 FAVGTDAIALTGLTTDDL 608
>gi|115523034|ref|YP_779945.1| RTX toxins and related Ca2+-binding proteins-like protein
[Rhodopseudomonas palustris BisA53]
gi|115516981|gb|ABJ04965.1| RTX toxins and related Ca2+-binding proteins-like protein
[Rhodopseudomonas palustris BisA53]
Length = 734
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/339 (17%), Positives = 102/339 (30%), Gaps = 36/339 (10%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + +++ GS+G+D + ++V F GND SG D + A
Sbjct: 302 IIGTVGDDNLLGTHCADTIDGSAGDDNIDAREGDDVIFGGIGNDTIIAGSGSDIVY--AG 359
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++ IV+ + + RL D L A + L+
Sbjct: 360 PGNDIVFAGAGNDIVFGGSGND--------RLFGEDGNDSLFGEDGDDQLFGGAGNDVLM 411
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLY-------LGSYDDLRNVFGSDR--GAAA 423
IG D+ EG D G+ DDL G D +AA
Sbjct: 412 GGIGNDLLSGGLGDDVLSDGEGSDTVRGDEGDDYVVAAADGAPDDLSGGDGLDTLDYSAA 471
Query: 424 RHYITHGVKEGR---------NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
R I EG + + F+A+ + ++ L G D S+
Sbjct: 472 RLSIHVNFAEGTAEGEEIGNDSVEGFEAIIGGSGNDKLTAGLESVSMHGGAGDDLISDGS 531
Query: 475 CEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE------ 528
+ D + + D + + G Y + + + A
Sbjct: 532 GADTVDAGDDDDCVVAAMDGTDDRYSGGSGRDTLDYSSATLSITVDLGEGSAEGIEIGRD 591
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
+A E++I + + + F G + F
Sbjct: 592 LLAEFEEIIGGDGNDHFIGGSNSVAF--TGGGGDDTFEF 628
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 55/327 (16%), Positives = 89/327 (27%), Gaps = 31/327 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + TI S GDD +D + GG+ N + + N +
Sbjct: 307 GDDNLLGTHCADTIDGSAGDDNIDAREGDDVIFGGIGNDTIIAGSGSDIVYAGPGNDIVF 366
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ V G SGND + G N+ F G+D G +G D +
Sbjct: 367 AGAGNDIVFGGSGNDRLFGEDGNDSLFGEDGDDQLFGGAGND--VLMGGIGNDLLSGGLG 424
Query: 324 AIIVYDANEHKQDFLSDVE----RLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQD 378
++ D D + E + AD D L+Y+A+ + +
Sbjct: 425 DDVLSDG--EGSDTVRGDEGDDYVVAAADGAPDDLSGGDGLDTLDYSAARLSIHVNFAEG 482
Query: 379 VFESM-------KHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYI 427
E + F G D ++ G+ DDL + A
Sbjct: 483 TAEGEEIGNDSVEGFEAIIGGSGNDKLTAGLESVSMHGGAGDDLISDGSGADTVDAGDDD 542
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG------CEEGRFV 481
V D + D +A + G G EE
Sbjct: 543 DCVVAAMDGTDDRYSGGSGRDTLDYSSATLSITVDLGEGSAEGIEIGRDLLAEFEEIIGG 602
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ + GS G D +
Sbjct: 603 DGNDHFIGGSNSVAFTGGGGDDTFEFQ 629
>gi|149045489|gb|EDL98489.1| matrix metalloproteinase 16, isoform CRA_a [Rattus norvegicus]
gi|149045490|gb|EDL98490.1| matrix metalloproteinase 16, isoform CRA_a [Rattus norvegicus]
Length = 607
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 58/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P + R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRRAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|32456007|ref|NP_862009.1| rb134 [Ruegeria sp. PR1b]
gi|22726359|gb|AAN05155.1| RB134 [Ruegeria sp. PR1b]
Length = 825
Score = 77.1 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/264 (15%), Positives = 70/264 (26%), Gaps = 28/264 (10%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G I + I G N I +S++G SGND ++G ++ +G D
Sbjct: 507 GTASADIFDGQDGDDRIDGGAGNDQIFGGFGADSLIGGSGNDALLGGLGDDQLSGGAGAD 566
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G G D + + D RL
Sbjct: 567 TLSGELGED-------------WLSGGEGGDLLNGDAGND------RLFGEAGSDRLFGG 607
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+L + + L G D+ + G D L D L+++ G
Sbjct: 608 DGNDLLSGGSDNDQLFGGYGNDLLRGNAGNDQLFGGAGNDRLLG----LVGNDLLKDIHG 663
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ G ++ L+ A + L+ G+D +
Sbjct: 664 DNILM-----GGGGQDRLQSGRGEDVLKGGAGDDLLVARGGADRLFGGSGRDTLKAGLGD 718
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFG 500
+ + LG + G
Sbjct: 719 DVLNGGNGADRLLGGAGRDELLGG 742
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/293 (14%), Positives = 79/293 (26%), Gaps = 11/293 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D I D G+G + + LG
Sbjct: 515 DGQDGDDRIDGGAGNDQIFGGFGADSLIGGSGNDALLGGLGDDQLSGGAGADTLSGELGE 574
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
GG + G + S + + ++ ++
Sbjct: 575 DWLSGGEGGDLLNGDAGNDRLFGEAGSDRLFGGDGNDLLSGGSDNDQLFGGYGNDLLRGN 634
Query: 195 YGAPKGS--LGNN---IYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYID 244
G + GN+ KD + GG D L + L GG + +
Sbjct: 635 AGNDQLFGGAGNDRLLGLVGNDLLKDIHGDNILMGGGGQDRLQSGRGEDVLKGGAGDDLL 694
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + G T+ + + G +G D ++G + + GND+ G G
Sbjct: 695 VARGGADRLFGGSGRDTLKAGLGDDVLNGGNGADRLLGGAGRDELLGGRGNDILRGGGGA 754
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
D F + +I F D ++ Q + D+E R + +
Sbjct: 755 DVFVFTRGHGQDRIQDFRPGTDQLDLSDLNQRYG-DLEISRAGNATLIDTGAG 806
>gi|126343573|ref|XP_001374247.1| PREDICTED: similar to phospholipase C gamma 1 [Monodelphis
domestica]
Length = 584
Score = 77.1 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 61/195 (31%), Gaps = 52/195 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIH 76
L W + Y+ + + QE+ AL WSKV LTF E +
Sbjct: 197 LSGGRWEKLNLTYRILRFPWQLVKEQV-------QEMMAEALRVWSKVTPLTFTEVRAGR 249
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ + +++FD + W G GT L
Sbjct: 250 ADIMIDFTRYWHGDNLPFDGPGGVLAHAFFPKTHRQ--GDVHFDYDETWTAGSDLGTDLL 307
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GHALGL H + +F Y
Sbjct: 308 QVAAHEFGHALGLQHSTEAKALMSPF---------------------------YTFRYPL 340
Query: 182 TPMVSDIVAVQKIYG 196
+ D +Q +YG
Sbjct: 341 SLSADDRRGIQHLYG 355
>gi|291566531|dbj|BAI88803.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 335
Score = 77.1 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 70/272 (25%), Gaps = 15/272 (5%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
IY G+D + G N E + G + I +++
Sbjct: 45 GGLGDDLIYGGKGNDTI----FGEEGNNTLFGDEGDDLVYGGSGDDRIYGGKGNDTIYAG 100
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIV 327
GN+ + GN ++ F G+D+ G G DT + IY +
Sbjct: 101 EGNNTLFGNEGEDLIFGGKGDDIIHGGQGDDTIYGGEGNNILSGDKGDDLIYGGIGNDTI 160
Query: 328 YDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
Y + F L F + + + + + + G D+ K
Sbjct: 161 YGVEGNNTVFGGPGNNLIFGGKGDDVIHSGRGDNTVYGGQGNDRIFAEKGNDLLTGGKGS 220
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG---AAARHYITHGVKEGRNPDAFKAL 443
F L G + D F A + G F +
Sbjct: 221 DTFSLVSGDPDKESFSIQELFGLDTITDFTVGEDRIELDADIFDMLGGAGNLADSEFTTI 280
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ A+ G ++ +
Sbjct: 281 ANFDPNNPTNTGGANLVYNSTSGVLYYIDGNG 312
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/237 (13%), Positives = 69/237 (29%), Gaps = 14/237 (5%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ I +D + GG N I + + G + I +++ G
Sbjct: 9 GTEGSDLIIGGNLNDAI----AGGKGNDIIYGGKGEDCLFGGLGDDLIYGGKGNDTIFGE 64
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GN+ + G+ +++ + SG+D G G DT + A ++ E +++
Sbjct: 65 EGNNTLFGDEGDDLVYGGSGDDRIYGGKGNDTIY--AGEGNNTLFGNEGEDLIFGG---- 118
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ + + +IL + + IG D ++ G
Sbjct: 119 ----KGDDIIHGGQGDDTIYGGEGNNILSGDKGDDLIYGGIGNDTIYGVEGNNTVFGGPG 174
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
++ F + + R + G ++ D
Sbjct: 175 NNLIFGGKGDDVIHSGRGDNTVYGGQGNDRIFAEKGNDLLTGGKGSDTFSLVSGDPD 231
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 56/214 (26%), Gaps = 19/214 (8%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E + I + +++ G GND++ G + F G+D+ G G DT F
Sbjct: 9 GTEGSDLIIGGNLNDAIAGGKGNDIIYGGKGEDCLFGGLGDDLIYGGKGNDTIF--GEEG 66
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
++ E +VY + K + L
Sbjct: 67 NNTLFGDEGDDLVYGGS-----------------GDDRIYGGKGNDTIYAGEGNNTLFGN 109
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G+D+ K +G D + D + Y G
Sbjct: 110 EGEDLIFGGKGDDIIHGGQGDDTIYGGEGNNILSGDKGDDLIYGGIGNDTIYGVEGNNTV 169
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
+ + + + D G D
Sbjct: 170 FGGPGNNLIFGGKGDDVIHSGRGDNTVYGGQGND 203
>gi|66968578|ref|YP_245455.1| HlyJ haemolysin-like protein [Pseudomonas aeruginosa]
gi|66862660|emb|CAI46960.1| HlyJ haemolysin-like protein [Pseudomonas aeruginosa]
Length = 3064
Score = 77.1 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/308 (14%), Positives = 78/308 (25%), Gaps = 56/308 (18%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
Y + + ++ G+D ++ GG + I G + I
Sbjct: 1531 AYSSDDLIEALGGDDVVHAGAGND----SIYGGDGSDRLYAGSGNDLIDGGTGDDLIDAG 1586
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G SGND ++G + +V +G+D +G SG D + + I +
Sbjct: 1587 EGDDVLHGGSGNDTLLGGAGADVLDGGTGDDRLEGGSGDDLYRFAVGWGNDFIIDSTGSD 1646
Query: 326 IVYDANEHKQDFL----------------------------------SDVERLRFADQCI 351
V D L + +E+ F
Sbjct: 1647 SVQFTGVAPTDLLLRRDGVDLVVLNQTTGDQLRIQGQFSYLAGVAGATAIEQFVFDGGTT 1706
Query: 352 DSV---------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
Q + A + + G D+ E EG D
Sbjct: 1707 WDYEAIKLKALEGTTQHDTIYGHADDDTVNAGAGNDLVYGQDGNDEIHGGEGADTL---- 1762
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
Y G+ +DL D L+ + L +
Sbjct: 1763 -YGGNGNDLLVGGTEDDLLDGGLGDDS----LHGGAGNDTLQAGGGDDVLDGGTGNDRLE 1817
Query: 463 VQVGKDHF 470
G D +
Sbjct: 1818 GGAGNDQY 1825
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/339 (12%), Positives = 82/339 (24%), Gaps = 56/339 (16%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D+L + I + + +I N +I + + G +G+DV++G+ N+
Sbjct: 1118 DILTASSITEGNDLVFGTIAG-DTIDALAGNDSIHGLAGDDQLSGGAGDDVLMGDDGNDT 1176
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-------------------------- 322
GND G G DT+ + I
Sbjct: 1177 LIGGIGNDSLIGGRGSDTYLFEIGHGNDVIDNAAQSAGTKLDRVVFGQGIDPATVSVERS 1236
Query: 323 NAIIVYDANEHKQDFLSD-----------VERLRFADQCI------------------DS 353
+ +V + L++ V+ + F D +
Sbjct: 1237 GSHLVIHTSASDSIRLTNYFSGEAVNGTAVDEIVFHDGTVWAIADIKGMVLQAGEGNDVI 1296
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+L + L G D G D+ +
Sbjct: 1297 QGYASDDLLSGLEGNDQLYGNAGNDTLLGGDGHDTLDGGTGNDVLLGDTGNDVLRGGEGD 1356
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ G L A + L + L G D +
Sbjct: 1357 DYLDGGDGNDTLDGGSGDDTLIGGAGNDYLSGGAGRDTLQGGDGNDTLLGGAGDDFLAGG 1416
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
+ + YL + D ++V Y++
Sbjct: 1417 KGNDRLDGGTGTNSYLFARGDGQDVIVDAYEGVVTIYLS 1455
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/349 (14%), Positives = 98/349 (28%), Gaps = 62/349 (17%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYG--APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
D GY + ++S + ++YG LG + + G+D
Sbjct: 1292 GNDVIQGYASDDLLSGLEGNDQLYGNAGNDTLLGGD---GHDTLDGGTGNDVLLGDTGND 1348
Query: 230 LLDLTLIGGVKNYIDL-----NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+L + D ++ G N ++ +++ G GND ++G +
Sbjct: 1349 VLRGGEGDDYLDGGDGNDTLDGGSGDDTLIGGAGNDYLSGGAGRDTLQGGDGNDTLLGGA 1408
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----- 339
++ GND DG +G +++ + I ++ ++ D L
Sbjct: 1409 GDDFLAGGKGNDRLDGGTGTNSYLFARGDGQDVIVDAYEGVVTIYLSDLPLDTLVFRRNG 1468
Query: 340 ------------------------------------DVERLR--FADQCIDSVNVKQRSI 361
+E L + + + +
Sbjct: 1469 TSLEVAFPDSPDDKLSLSAFFRDEIPLSGIRLRYGEGLETLIEPAQLRLLTLEGTEAADL 1528
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ +S + + + G DV + +G LY GS +DL + D
Sbjct: 1529 IHAYSSDDLIEALGGDDVVHAGAGNDSIYGGDG-----SDRLYAGSGNDLIDGGTGDDLI 1583
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
A G L A + L D G D +
Sbjct: 1584 DAGE----GDDVLHGGSGNDTLLGGAGADVLDGGTGDDRLEGGSGDDLY 1628
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 54/411 (13%), Positives = 113/411 (27%), Gaps = 29/411 (7%)
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
+ +++ G G T+ LG H + + D+
Sbjct: 2062 TYSNAWDQGSNILEGGTGNDTLYGSFGDDTYIFNLGDGHDLLIERRPGEAYSNIEPSTDT 2121
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS--LGNNIYKIEVQQKD 215
+ + SD + VQ + P L + ++ +
Sbjct: 2122 LSFGAGIAAGDLGFVRRGNDLIIEHANGSDSITVQNWFQEPTDHFKLEHFLFADGSELSQ 2181
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ + G + + ++I L G N I + + G +
Sbjct: 2182 ADVENRVIWQGTSGVDSFIGYRDLGDHIRLGDG-DDKAWGRAGNDLIHGEGGNDYLEGEA 2240
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + G S N+ +G+D+ G +G D + Y I
Sbjct: 2241 GNDTLFGGSGNDQLDGGAGDDLLVGGTGDDKYIYAPGGGADVIDNSGGGYDGVF------ 2294
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF-GLSEG 394
N + L + +DL+ ++ D +S++ F G +
Sbjct: 2295 -----------------FTNGIGQDRLTFGRDGDDLLILVDGDTAQSVRVLDHFLGGDKA 2337
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS--HEDL 452
S YL + + + ++ + A + G G + + + D
Sbjct: 2338 ISFVQPSGGYLLTAERIGHIVAAQGVAGDFEALIEGTAAGEQLAGYDGRDLLRGLAGNDT 2397
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ + + + + G + D + D L G D
Sbjct: 2398 LFGMGGDDRIEGGDGNDYLSGGNGQHNGSGNDLLIGGAGNDILAGEDGDDT 2448
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 65/526 (12%), Positives = 120/526 (22%), Gaps = 85/526 (16%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG-----SYNGGYPVYG 148
S + ADV G G + + A+G + +
Sbjct: 1594 GGSGNDTLLGGAGADVLDGGTGDDRLEGGSGDDLYRFAVGWGNDFIIDSTGSDSVQFTGV 1653
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
D ++ + + V+ A+++ G +
Sbjct: 1654 APTDLLLRRDGVDLVVLNQTTGDQLRIQGQFSYLAGVAGATAIEQF-----VFDGGTTWD 1708
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
E + + T +D+ D T+ G N + + I G E T+
Sbjct: 1709 YEAIKLKALEGTTQHDTIYGHADDDTVNAGAGNDLVYGQDGNDEIHGGEGADTLYGGNGN 1768
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDV------------------FDGSSGLDTFFYY 310
+ +VG + +D++ G ++ +GND +G +G D + +
Sbjct: 1769 DLLVGGTEDDLLDGGLGDDSLHGGAGNDTLQAGGGDDVLDGGTGNDRLEGGAGNDQYHFT 1828
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFL-------------------------------- 338
A I + V D L
Sbjct: 1829 AGWGSDLIIDSAGSDSVQFTGVAPADLLLRRDGVDLVVLNQTTGDQLRIQGQFSSLAGVA 1888
Query: 339 --SDVERLRFADQCIDSV---------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+E+ F Q I+ A + + G D+
Sbjct: 1889 GAKAIEQFVFDGGTTWDYEAIKLKALEGTGQDDIIYGHADDDLVTAQAGNDLVYGQDGND 1948
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
E +G D + + G F L A
Sbjct: 1949 EIHGGDGADTLYGGDGDDLLDGGTGDDQLDGGWGNDTLQGGEGHDLLIGGGGFDELYGGA 2008
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
++ L + G + G
Sbjct: 2009 GNDTLQGHGLLDGGDGDDLLEGSGELLGGVGNDTLLGQGF--------DTLRGGAGDDVL 2060
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
Y +G N LE ++ L +F D + G H
Sbjct: 2061 ETYSNA-WDQGSNI-----LEGGTGNDTLYGSFGDDTYIFNLGDGH 2100
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 57/424 (13%), Positives = 113/424 (26%), Gaps = 47/424 (11%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS---HNALHEIGHALGLMHPGSYN 141
+ D G G T + + + EIG A L+ G
Sbjct: 2589 GTAGNDILLGGAGNDTLNGAAGNDTLIGGSGDDTYVYTAGQDVIEEIGGADTLVFAGGIT 2648
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G+ S ++ + + + + + +A + G
Sbjct: 2649 FNQVASGLMK-----SGNDLILRVNGSTANQVTLKDFFLGGDNLVETIAF-ETGGQLTAE 2702
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + V + F TI S GDD + G N
Sbjct: 2703 QIFGAFGLAVPTPAAAFDDTIQGSTGDDAA---------------------LDGTAGNDL 2741
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G +GND + G + ++ +GND G G DT+ + A
Sbjct: 2742 LQGGNGGDVLFGDAGNDRLEGGNGDDTLDGGTGNDTLVGGRGDDTYIFAAGGGQD----- 2796
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
V D + D L E + F + +L + + + +
Sbjct: 2797 -----VIDNSGGGADTL-HFEGISFNQVASGLMKSGNDLVLNVSGGSDKVTIRNWFLGGD 2850
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV-----FGSDRGAAARHYITHGVKEGRN 436
+ F + S D +R G +
Sbjct: 2851 YVVDTITFASGGQITAAQLFGAFGLSNPDPVGSPVYQNLPDERAFGTVLTGRAGDQIILG 2910
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
++ A ++ L + + G D + +G+ V + + D+
Sbjct: 2911 SSDDDLIDGGAGNDTLRGNAGNDYLIGGAGSDTYVFAVG-DGQDVINNLSNTPDTDTDVL 2969
Query: 497 NVFG 500
++ G
Sbjct: 2970 SIEG 2973
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 65/483 (13%), Positives = 115/483 (23%), Gaps = 40/483 (8%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+G Y D D G I + G +G
Sbjct: 2192 GTSGVDSFIGYRDLGDHIRLGDGDDKAWGRAGNDLIHGEGGNDYLEGEAGNDTLFGGSGN 2251
Query: 144 YPVYGVDNDYEN---DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ G D + + D + ++ GY + I + +G
Sbjct: 2252 DQLDGGAGDDLLVGGTGDDKYIYAPGGGADVIDNSGGGYDGVFFTNGIGQDRLTFG---- 2307
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G+++ + + GGD + G + G +
Sbjct: 2308 RDGDDLLILVDGDTAQSVRVLDHFLGGDKAISFVQPSGGYLLTAERIGHIVAAQGVAGDF 2367
Query: 261 T--IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
I E + G G D++ G + N+ F G+D +G G D + +
Sbjct: 2368 EALIEGTAAGEQLAGYDGRDLLRGLAGNDTLFGMGGDDRIEGGDGND--YLSGGNGQ--- 2422
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ D L+ D + Y A+ I
Sbjct: 2423 --HNGSGNDLLIGGAGNDILAG------EDGDDTLIGGAGDDAYYYRANGGVDIVDNSGG 2474
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
F+ + D + L D + V ++ + + I + +G N
Sbjct: 2475 GFDGVFFLDVPRSRLSFHRDGDDLVILVDSDLGQQVRVTNHFLGSDYAIDYVQPDGGNYL 2534
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
A + G E T + V
Sbjct: 2535 TT-------------AQIAAQLTALPDGSGGEEPGEPGEPGEPTDPDNPGGPGEPPVAGV 2581
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
G D G L A ++ LI D + AG+D G
Sbjct: 2582 GGDDLLVGTA-----GNDILLGGAGNDTLNGAAGNDTLIGGSGDDTYVYTAGQDVIEEIG 2636
Query: 559 YEE 561
+
Sbjct: 2637 GAD 2639
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 72/538 (13%), Positives = 138/538 (25%), Gaps = 61/538 (11%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
N + + D D G G + A +
Sbjct: 2424 NGSGNDLLIGGAGNDILAGEDGDDTLIGGAGDDAY-YYRANGGVDIVDNSGGGFDGVFFL 2482
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
V + D V+ + + + + D V G +
Sbjct: 2483 DVPRSRLSFHRD-GDDLVILVDSDLGQQVRVTNHFLGSDYAIDYVQPD---GGNYLTTAQ 2538
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
++ S + + D GG + G N +
Sbjct: 2539 IAAQLTALPDGSGGEEPGEPGEPGEPTDPDNPGGPGEPPVAGVGGDDLLVGTAGNDILLG 2598
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--- 321
+++ G++GND +IG S ++ + ++G DV + G DT + ++
Sbjct: 2599 GAGNDTLNGAAGNDTLIGGSGDDTYVYTAGQDVIEEIGGADTLVFAGGITFNQVASGLMK 2658
Query: 322 --ENAIIVYDANEHKQDFLSD--------VERLRFADQ---------------------- 349
+ I+ + + Q L D VE + F
Sbjct: 2659 SGNDLILRVNGSTANQVTLKDFFLGGDNLVETIAFETGGQLTAEQIFGAFGLAVPTPAAA 2718
Query: 350 --CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----TFDSYL 403
+ + L+ TA + L G DV G D T + L
Sbjct: 2719 FDDTIQGSTGDDAALDGTAGNDLLQGGNGGDVLFGDAGNDRLEGGNGDDTLDGGTGNDTL 2778
Query: 404 YLGSYDDL---RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
G DD G D + EG + + + + ++ ++N +
Sbjct: 2779 VGGRGDDTYIFAAGGGQDVIDNSGGGADTLHFEGISFNQVASGLMKSGNDLVLNVSGGSD 2838
Query: 461 DLVQV----GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
+ G D+ + + L+ + GS G
Sbjct: 2839 KVTIRNWFLGGDYVVDTITFASGGQITAAQLFGAFGLSNPDPVGSPVYQNLPDERAFGTV 2898
Query: 517 -EGRNPD-------AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
GR D ++ A ++ L + + AG D + + I
Sbjct: 2899 LTGRAGDQIILGSSDDDLIDGGAGNDTLRGNAGNDYLIGGAGSDTYVFAVGDGQDVIN 2956
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/344 (14%), Positives = 92/344 (26%), Gaps = 17/344 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + G + + + G + N I +++ G G+D++ G + ++
Sbjct: 1920 DDIIYGHADDDLVTAQAGNDLVYGQDGNDEIHGGDGADTLYGGDGDDLLDGGTGDDQLDG 1979
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR---FAD 348
GND G G D +Y + D+
Sbjct: 1980 GWGNDTLQGGEGHDLLIGGGGFDE--LYGGAGNDTLQGHGLLDGGDGDDLLEGSGELLGG 2037
Query: 349 QCIDSVNVKQRSILEYTASYEDL-----IQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
D++ + L A + L G ++ E S G D
Sbjct: 2038 VGNDTLLGQGFDTLRGGAGDDVLETYSNAWDQGSNILEGGTGNDTLYGSFGDDTYI---F 2094
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN-AFADAPDL 462
LG DL + T + G A ++ +I A
Sbjct: 2095 NLGDGHDLLIERRPGEAYSNIEPSTDTLSFGAGIAAGDLGFVRRGNDLIIEHANGSDSIT 2154
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
VQ ++ E S L ++ G+ + Y G R D
Sbjct: 2155 VQNWFQEPTDHFKLEHFLFADGSELSQADVENRVIWQGTSGVDSFIGYRDLGDH-IRLGD 2213
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
A ++ + + +AG D + FG +
Sbjct: 2214 GDDKAWGRAGNDLIHGEGGNDYLEGEAGND--TLFGGSGNDQLD 2255
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 47/338 (13%), Positives = 95/338 (28%), Gaps = 26/338 (7%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
I + G + + + DV G + N + G
Sbjct: 2723 IQGSTGDDAALDGTAGNDLLQGGNGGDVLFGDAGNDRLEGGNGDDTLDGGTG-NDTLVGG 2781
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G Y D S + + + + + G+
Sbjct: 2782 RGDDTYIFAAGGGQDVIDNSGGGADTLHFEGISFNQVASGLMKSGNDLVLNVSGGS---- 2837
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + + TI + G + L G S ++
Sbjct: 2838 --DKVTIRNWFLGGDYVVDTITFASGGQITAAQLFGAFGLSNPDPVGSPVYQNLPDER-- 2893
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
A TV + G +G+ +++G+S +++ +GND G++G D +
Sbjct: 2894 -AFGTV---LTGRAGDQIILGSSDDDLIDGGAGNDTLRGNAGND-----------YLIGG 2938
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI--GQDV 379
+ A QD ++++ D + S+ R L + + +DL+ + +D
Sbjct: 2939 AGSDTYVFAVGDGQDVINNLSNTPDTDTDVLSIEGIVREDLWLSRNGDDLVIDVTGSEDS 2998
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ S LY D L N +
Sbjct: 2999 ITVQDWYANSAQQLDVIQAGGSSLYANQVDSLVNAMAA 3036
Score = 44.4 bits (103), Expect = 0.069, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 36/103 (34%), Gaps = 10/103 (9%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
D G+ LD + G N +I G + TI ++ G SGND + G
Sbjct: 395 IDGSGNS-LDNEITGNSGNNFIRGGGGEDTIYGGGGDDTILGGVEKVNLYGESGNDDLYG 453
Query: 283 NS---------ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N+ G+D+ DG G DT A Y
Sbjct: 454 GDGDDYLSGGIGNDYISGGDGHDIMDGGEGRDTLLGGAGYDTY 496
>gi|213625068|gb|AAI69744.1| MT3-MMP protein [Xenopus laevis]
Length = 608
Score = 77.1 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 59/211 (27%), Gaps = 55/211 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-- 75
L Q W + I Y +T ++ R A W V LTFEE
Sbjct: 121 LTGQKWHHKHITYSIKNVTPKVGDL-------ETRKAIRRAFDVWQNVTPLTFEEVPYCE 173
Query: 76 ------HSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 174 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 233
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 234 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 274
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
F D+ +QKIYG P+ +
Sbjct: 275 --FKLP----TDDLQGIQKIYGPPEKAPAPT 299
>gi|148233994|ref|NP_001085262.1| matrix metallopeptidase 16 (membrane-inserted) [Xenopus laevis]
gi|75863761|gb|AAQ76702.2| membrane-type matrix metalloproteinase 3 precursor [Xenopus laevis]
Length = 613
Score = 77.1 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 59/211 (27%), Gaps = 55/211 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-- 75
L Q W + I Y +T ++ R A W V LTFEE
Sbjct: 126 LTGQKWHHKHITYSIKNVTPKVGDL-------ETRKAIRRAFDVWQNVTPLTFEEVPYCE 178
Query: 76 ------HSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 179 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 238
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 239 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 279
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
F D+ +QKIYG P+ +
Sbjct: 280 --FKLP----TDDLQGIQKIYGPPEKAPAPT 304
>gi|260429652|ref|ZP_05783628.1| hemolysin-type calcium-binding region [Citreicella sp. SE45]
gi|260419135|gb|EEX12389.1| hemolysin-type calcium-binding region [Citreicella sp. SE45]
Length = 1181
Score = 77.1 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 70/565 (12%), Positives = 141/565 (24%), Gaps = 46/565 (8%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDI 79
+ + T L + + + D+ E S+
Sbjct: 552 NFFGGAGRDTADFSGTTYGTLGMLVDLATETYDYLYTSTRTAYGASFDIQSVENVFGSNE 611
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
+G + AD G+G TI+ I A G
Sbjct: 612 HDNLFGDGADNIFLGNGGDDSINGRGGADTINGGLGNDTIIGGLGDDVIAGAQGADSMFG 671
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
NG + ++ + L + + F +D + A
Sbjct: 672 NNGRDTLSYSASNAGINITLETGANTGGHAQGDFITGFERIVGSAFADTID------ANS 725
Query: 200 GSLGN-NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+L + QT+ GG+D + +
Sbjct: 726 RNLTTVEAGGGNDRIIGGANTQTMRGQGGNDTITAYAGANFNST--------------SV 771
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + + G++G+D +IG ++V ++G D +G +G DT Y + +
Sbjct: 772 ADFLDGGSGRDVLAGAAGDDTIIGGLGDDVVAGNAGADSMEGGNGRDTLSYANSNAAVNV 831
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQ 377
A + DF++ ER+ + + + +E + +I
Sbjct: 832 LLESGANT---GGHAQGDFITGFERVVGSSFNDVINANNRNLTTIEAGGGNDRIIGGGNT 888
Query: 378 DVFESMKHFYEFGLSEG---RDITFDSYLYLGSYDDLRNVFGSDRGAA-----ARHYITH 429
G + + G+ DD+ D
Sbjct: 889 QTMRGGGGNDTITAYAGANFNSTSTADVIEGGNGDDVLAGAAGDDTIIGGLGDDVIAGNA 948
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF-----GCEEGRFVTFD 484
G + + Y S+ + A + G G + +
Sbjct: 949 GADSLVGNNGKDTVSYANSNAGVQVLMNSATNTGGHADGDILEGFDRLVGSAFGDVLDAN 1008
Query: 485 SYLYLGSYDDLRNVFGSDR--------GAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
S + N G + + ++E A ++ L
Sbjct: 1009 SINTVTIEGGGGNDIIIGGGNFQTLRGGGGNDTITGYSGGNPASTSTLDSIEGGAGNDVL 1068
Query: 537 INAFADAPDLVQAGKDHFSNFGYEE 561
A D L +G D G +
Sbjct: 1069 AGANGDDTILGGSGNDIIRANGGND 1093
Score = 38.2 bits (87), Expect = 4.4, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 65/286 (22%), Gaps = 31/286 (10%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+T + S + + DV G TI+ I
Sbjct: 888 TQTMRGGGGNDTITAYAGANF-NSTSTADVIEGGNGDDVLAGAAGDDTIIGGLGDDVIAG 946
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G NG V +++ + S + D + F D++
Sbjct: 947 NAGADSLVGNNGKDTVSYANSNAGVQVLMNSATNTGGHADGDILEGFDRLVGSAFGDVLD 1006
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG------------ 238
I ++ QT+ GG+D + G
Sbjct: 1007 ANSI-----NTVTIEGGGGNDIIIGGGNFQTLRGGGGNDTITGYSGGNPASTSTLDSIEG 1061
Query: 239 ----------VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ L I N T+A + ++ + ++V +
Sbjct: 1062 GAGNDVLAGANGDDTILGGSGNDIIRANGGNDTVAGGSGADTFIFGLSSEVDTILDFQDD 1121
Query: 289 FFESSGNDVFDGSSGLDTFF---YYAPSYLYKIYRFENAIIVYDAN 331
+ G + S I+ F IV
Sbjct: 1122 IDTLRLDATLWGGGMTAQQVVNTFADDSSGDTIFDFGGGRIVVLDG 1167
Score = 37.1 bits (84), Expect = 9.5, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 68/205 (33%), Gaps = 5/205 (2%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L+ + G N T + V G +GND + A +F +GND SS +
Sbjct: 384 LSGSQFDYWAGTVGNDTFTVDSGAGDVRGGAGNDDITELGAIRNYFGDAGNDTLRVSSAI 443
Query: 305 DTFFYYAPSYLYKIY---RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
++ + S I EN + + E D ++ E++ ++
Sbjct: 444 NSDLHDGGSGNDWIDFSNSGENGLEIDLTAELVTDTNANTEQMI--SFENAIGTAGDDTV 501
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ +LI G D+ + E G + D+ G G+ R
Sbjct: 502 TDAVTENNELILGAGNDLVNHLGGLNEDGDTITGGGGNDTVAQTGIGWSFNFFGGAGRDT 561
Query: 422 AARHYITHGVKEGRNPDAFKALEYI 446
A T+G A + +Y+
Sbjct: 562 ADFSGTTYGTLGMLVDLATETYDYL 586
>gi|149201404|ref|ZP_01878379.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
gi|149145737|gb|EDM33763.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
Length = 688
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/267 (14%), Positives = 75/267 (28%), Gaps = 8/267 (2%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + I G+D +D ++ N + +IGG + +
Sbjct: 404 TGTDGDDTLAGTDGGDQIAAGAGNDSIDGGAGNDSISSSDGNDQAIGGAGNDNIGGGQGD 463
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI + + G G D ++G + N+V + ND G G D+ I
Sbjct: 464 DTIDGGAGDDIIGGGFGADSIMGGAGNDVVAGGADNDTLSGGDGNDSM--SGSFGNDSID 521
Query: 320 RFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
E A + D + +R+ + + L + + G D
Sbjct: 522 GGEGADDIGGGTGRDTIDAGAGDDRVGGGEGDDSILGGDGDDFLAGGGRNDLIDGGAGSD 581
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ D+ S + G D + + R + E N
Sbjct: 582 TINAGAGNDTITGGADADLFVFSSFFDGEADIITDFEDGSDSFLIRRFDPDTGVENINNG 641
Query: 439 AFKALEYIASHEDLINAFADAPDLVQV 465
++A+ + A +
Sbjct: 642 GNGLAGFVAAMNIVDVAGGAQMTVGGN 668
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 49/255 (19%), Positives = 70/255 (27%), Gaps = 40/255 (15%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
I + GDD L G + IA +S+ G +GND
Sbjct: 400 TDVITGTDGDDTL----------------------AGTDGGDQIAAGAGNDSIDGGAGND 437
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDT-----FFYYAPSYLYKIYRFENAIIVYDANEH 333
+ + N+ +GND G G DT A A
Sbjct: 438 SISSSDGNDQAIGGAGNDNIGGGQGDDTIDGGAGDDIIGGGFGADSIMGGAGNDVVAGGA 497
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D LS D ++ +D+ G+D ++ G E
Sbjct: 498 DNDTLSG------GDGNDSMSGSFGNDSIDGGEGADDIGGGTGRDTIDAGAGDDRVGGGE 551
Query: 394 GRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G D D G D + GSD A + G + D F +
Sbjct: 552 GDDSILGGDGDDFLAGGGRNDLIDGGAGSDTINA--GAGNDTITGGADADLFVFSSFFDG 609
Query: 449 HEDLINAFADAPDLV 463
D+I F D D
Sbjct: 610 EADIITDFEDGSDSF 624
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/301 (16%), Positives = 80/301 (26%), Gaps = 31/301 (10%)
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+P + V+G + T V + D T I A
Sbjct: 369 NPNGDILFFGVFGDAALLGQLAVGTVVEPEPTDVITGTDGDDTLAGTDGGDQIAA----- 423
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
GA S+ S G+D + D T+ GG + I
Sbjct: 424 GAGNDSIDGGA--GNDSISSSDGNDQAIGGAGNDNIGGGQGDDTIDGGAGDDIIGGGFGA 481
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
SI G N +A +++ G GND + G+ N+ G D G +G DT
Sbjct: 482 DSIMGGAGNDVVAGGADNDTLSGGDGNDSMSGSFGNDSIDGGEGADDIGGGTGRDTI--D 539
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A + ++ E + D + +++ A +
Sbjct: 540 AGAGDDRVGGGEGDDSILGG-----------------DGDDFLAGGGRNDLIDGGAGSDT 582
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ G D F S D D D + D + G
Sbjct: 583 INAGAGNDTITGGADADLFVFSSFFDGEADIITDFEDGSDSFLIRRFDPDTGVENINNGG 642
Query: 431 V 431
Sbjct: 643 N 643
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/247 (12%), Positives = 59/247 (23%), Gaps = 12/247 (4%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N G + + + +VV DV+ G ++ + G D +G D
Sbjct: 369 NPNGDILFFGVFGDAALLGQLAVGTVVEPEPTDVITGTDGDDTLAGTDGGDQIAAGAGND 428
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ + I + + + +
Sbjct: 429 SI--DGGAGNDSISSSDGNDQAIGGAGNDNIGGGQGDDTIDGGAGDDIIGGGFGADSIMG 486
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
A + + D S G DS DD+ G D A
Sbjct: 487 GAGNDVVAGGADNDTLSGGDGNDSMSGSFGN----DSIDGGEGADDIGGGTGRDTIDAGA 542
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
G EG ++ + L + G D + + D
Sbjct: 543 GDDRVGGGEG-----DDSILGGDGDDFLAGGGRNDLIDGGAGSDTINAGAGNDTITGGAD 597
Query: 485 SYLYLGS 491
+ L++ S
Sbjct: 598 ADLFVFS 604
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 34/300 (11%), Positives = 65/300 (21%), Gaps = 54/300 (18%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ I D G G TI
Sbjct: 423 AGAGNDSIDGGAGNDSISSSDGNDQAIGGAGNDNIGGGQGDDTID--------------- 467
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G G D V++ D++ +
Sbjct: 468 --GGAGDDIIGGGFGADSIMGGAGNDVVAGGADNDTLSGGDGNDSMSGS----------- 514
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
I G D +D +GG
Sbjct: 515 ------------FGNDSIDGGEGADDIGGGTGRDTIDA-------------GAGDDRVGG 549
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + +I + + G ND++ G + ++ +GND G + D F + +
Sbjct: 550 GEGDDSILGGDGDDFLAGGGRNDLIDGGAGSDTINAGAGNDTITGGADADLFVFSSFFDG 609
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + D + VE + + V +I++ + +
Sbjct: 610 EADIITDFEDGSDSFLIRRFDPDTGVENIN-NGGNGLAGFVAAMNIVDVAGGAQMTVGGN 668
Score = 39.8 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 23/223 (10%), Positives = 46/223 (20%), Gaps = 3/223 (1%)
Query: 326 IVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D L+ + ++ + + + I G D
Sbjct: 400 TDVITGTDGDDTLAGTDGGDQIAAGAGNDSIDGGAGNDSISSSDGNDQAIGGAGNDNIGG 459
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ G DI + N + G +
Sbjct: 460 GQGDDTIDGGAGDDIIGGGFGADSIMGGAGNDVVAGGADNDTLSGGDGNDSMSGSFGNDS 519
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
++ +D+ G D ++ G + G+
Sbjct: 520 IDGGEGADDIGGGTGRDTIDAGAGDDRVGGGEGDDSILGGDGDDFLAGGGRNDLIDGGAG 579
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
+ G + D F + D+I F D D
Sbjct: 580 SDTINAGAGNDTITGGADADLFVFSSFFDGEADIITDFEDGSD 622
>gi|85704124|ref|ZP_01035227.1| hypothetical protein ROS217_14036 [Roseovarius sp. 217]
gi|85671444|gb|EAQ26302.1| hypothetical protein ROS217_14036 [Roseovarius sp. 217]
Length = 783
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 76/278 (27%), Gaps = 17/278 (6%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNY 242
A+ G+ +L ++ + ++ GDD + D L N
Sbjct: 493 WSALFSNGGSDFTTLSDD----GALALEGAGNDSVVGGAGDDTIEGGAGDDVLAASDGND 548
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
L + IGG N TI T + + G+D+ G N+V +G+D G +
Sbjct: 549 SVLGGDGNDRIGGGLGNDTIDGGTGDDVIGAGQGDDIAAGGDGNDVVSGGAGSDTLGGGA 608
Query: 303 GLDTFFYYAPSYLYKIYRFENAII-----VYDANEHKQDFLSDVERLRFADQCIDS---V 354
D+ + ++ I D + E
Sbjct: 609 DNDSISGSFGNDSIDGGDGDDLIGGGTGQDTILGGAGNDQVGAGEGDDDLFGGDGDDFLA 668
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ +++ A + + G DV F +E D D +
Sbjct: 669 GGGRDDLIDGGAGNDTINGGAGNDVMTGGDGVELFVFNEFVAGDVDVITDFEVGVDSVLI 728
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
+D G A + ++ L
Sbjct: 729 RVNDLDNGGNGLQGFFDALGIVDTFAGAQFNVNGNDVL 766
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 37/295 (12%), Positives = 77/295 (26%), Gaps = 41/295 (13%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+NG + + D G G TI + + G
Sbjct: 498 SNGGSDFTTLSDDGALALEGAGNDSVVGGAGDDTIEGGAGDDVLAASDG----------- 546
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
ND + + D++ + D +A G
Sbjct: 547 ------NDSVLGGDGNDRIGGGLGNDTIDGGTGDDVIGAGQGDDIA-----------AGG 589
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKN 259
+ T+ +D + + + GG + + +I G N
Sbjct: 590 D---GNDVVSGGAGSDTLGGGADNDSISGSFGNDSIDGGDGDDLIGGGTGQDTILGGAGN 646
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + G G+D + G +++ +GND +G +G D L+
Sbjct: 647 DQVGAGEGDDDLFGGDGDDFLAGGGRDDLIDGGAGNDTINGGAGNDVMTGGDGVELFVFN 706
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
F + DF V+ + +D+ + + +
Sbjct: 707 EFVAGDVDVI-----TDFEVGVDSVLIRVNDLDNGGNGLQGFFDALGIVDTFAGA 756
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 29/232 (12%), Positives = 53/232 (22%), Gaps = 21/232 (9%)
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + + D V +E A + L G D
Sbjct: 494 SALFSNGGSDFTTLSDDGALALEGAGNDSVVGGAGDDTIEGGAGDDVLAASDGNDSVLGG 553
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G G D G+ DD+ D AA G L
Sbjct: 554 DGNDRIGGGLGNDTI-----DGGTGDDVIGAGQGDDIAA----GGDGNDVVSGGAGSDTL 604
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
A ++ + +F + G D ++ + +D D
Sbjct: 605 GGGADNDSISGSFGNDSIDGGDGDDLIGGGTGQDTILGG--------AGNDQVGAGEGDD 656
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
GR+ ++ A ++ + + G + F
Sbjct: 657 DLFGGDGDDFLAGGGRD----DLIDGGAGNDTINGGAGNDVMTGGDGVELFV 704
>gi|303285997|ref|XP_003062288.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455805|gb|EEH53107.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 902
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN------PDLYL 573
+ +A Y+ + DL AF + K H+ + G E R++ + YL
Sbjct: 225 DISDDQAKCYLHRYRDLRGAFGHN---IARAKKHWVDHGRHEHRTLDCDYITNEEAQCYL 281
Query: 574 TSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
Y DL FG + AA +H+ HG KEGR
Sbjct: 282 NRYSDLRRAFGHNIGAAKRHWNKHGKKEGR 311
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-----DAFKALEYIASHEDL 536
+ YL Y DLR FG + A +H++ HG E R +A Y+ + DL
Sbjct: 228 DDQAKCYLHRYRDLRGAFGHNIARAKKHWVDHGRHEHRTLDCDYITNEEAQCYLNRYSDL 287
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRS 564
AF + A K H++ G +EGR
Sbjct: 288 RRAFGHN---IGAAKRHWNKHGKKEGRD 312
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD------SYL 487
++ +A Y+ + DL AF + K H+ + G E R + D +
Sbjct: 223 DKDISDDQAKCYLHRYRDLRGAFG---HNIARAKKHWVDHGRHEHRTLDCDYITNEEAQC 279
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
YL Y DLR FG + GAA RH+ HG KEGR+
Sbjct: 280 YLNRYSDLRRAFGHNIGAAKRHWNKHGKKEGRD 312
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 9/128 (7%)
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERL--RFADQCIDSVNVKQRSILE-YTASYEDLIQV 374
+ ++D + Q L VE+L + + Y Y DL
Sbjct: 185 TGNTDLGGRIHDRTDFVQKALQKVEKLHHALEGSLANIDKDISDDQAKCYLHRYRDLRGA 244
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFD------SYLYLGSYDDLRNVFGSDRGAAARHYIT 428
G ++ + KH+ + G E R + D + YL Y DLR FG + GAA RH+
Sbjct: 245 FGHNIARAKKHWVDHGRHEHRTLDCDYITNEEAQCYLNRYSDLRRAFGHNIGAAKRHWNK 304
Query: 429 HGVKEGRN 436
HG KEGR+
Sbjct: 305 HGKKEGRD 312
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 45/182 (24%), Gaps = 29/182 (15%)
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ D + + +Y +
Sbjct: 90 NATAPAPSGDDANATAPAPSADDANATAPAPSADDSADDANTTYVAADSSAADAEADKKA 149
Query: 509 HYITHGVK-------------EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD--- 552
+I + E K E + + DL D D VQ
Sbjct: 150 KFIKAAEEAATAANKHLEDILEKLTAAENKLSEKLTGNTDLGGRIHDRTDFVQKALQKVE 209
Query: 553 --HFSNFGYEEGRSITFN-------PDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
H + EG + YL Y DL FG + + A +H++ HG E R
Sbjct: 210 KLHHAL----EGSLANIDKDISDDQAKCYLHRYRDLRGAFGHNIARAKKHWVDHGRHEHR 265
Query: 604 AL 605
L
Sbjct: 266 TL 267
>gi|220926496|ref|YP_002501798.1| hypothetical protein Mnod_6737 [Methylobacterium nodulans ORS 2060]
gi|219951103|gb|ACL61495.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 115
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYL 573
+ G F + Y+A++ D+ P +H+ FG++EGR + F+ YL
Sbjct: 13 RAGWAMGGFDPVYYLATYPDVAEH-GCDPL------EHYLKFGWKEGRDPSAQFSTSGYL 65
Query: 574 TSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
++ D+ HY HG+ EGR+
Sbjct: 66 SANPDVAEA----GINPLVHYRLHGLAEGRSG 93
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD YL +Y D+ HY+ G KEGR+P A F Y++++ D+ A
Sbjct: 20 GFDPVYYLATYPDVAEHG----CDPLEHYLKFGWKEGRDPSAQFSTSGYLSANPDVAEA- 74
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRS 564
P + H+ G EGRS
Sbjct: 75 GINPLV------HYRLHGLAEGRS 92
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYL 489
+ G F + Y+A++ D+ D +H+ FG +EGR + F + YL
Sbjct: 13 RAGWAMGGFDPVYYLATYPDVAEHGCDP-------LEHYLKFGWKEGRDPSAQFSTSGYL 65
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
+ D+ + HY HG+ EGR+
Sbjct: 66 SANPDVAEAGIN----PLVHYRLHGLAEGRSG 93
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 15/92 (16%)
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIAS 448
G + G FD YL +Y D+ HY+ G KEGR+P F Y+++
Sbjct: 15 GWAMG---GFDPVYYLATYPDVA----EHGCDPLEHYLKFGWKEGRDPSAQFSTSGYLSA 67
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ D+ A + H+ G EGR
Sbjct: 68 NPDVAEAGINP-------LVHYRLHGLAEGRS 92
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNV 414
+ Y A+Y D + G D +H+ +FG EGRD + F + YL + D+
Sbjct: 19 GGFDPVYYLATYPD-VAEHGCDPL---EHYLKFGWKEGRDPSAQFSTSGYLSANPDVAEA 74
Query: 415 FGSDRGAAARHYITHGVKEGRNP 437
HY HG+ EGR+
Sbjct: 75 ----GINPLVHYRLHGLAEGRSG 93
>gi|2662306|dbj|BAA23742.1| membrane-type matrix metalloproteinase 3 [Homo sapiens]
Length = 607
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 59/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|116694643|ref|YP_728854.1| RTX toxin exported protein [Ralstonia eutropha H16]
gi|113529142|emb|CAJ95489.1| RTX toxin exported protein [Ralstonia eutropha H16]
Length = 1552
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 61/525 (11%), Positives = 135/525 (25%), Gaps = 57/525 (10%)
Query: 7 VYTTERI-ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKV 65
YT + A L Q+ ++ D+ T ++ +IT N A A ++
Sbjct: 930 TYTLDNSKAQSLAAGQHVTDSLSVQSADLSATQAITVNITGANDAAVNAVPLA-QVVNED 988
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY-GIGKGTILSHNA 124
L F + ++ N + T G T+ +
Sbjct: 989 TPLVFRTANGNALSISDVDNASHTVTLSASHGAITLNGVAGLQFLSGDGTADSTMTFTGS 1048
Query: 125 LHEIGHAL-GLMHPGSYNGGYPV-----YGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
I AL G+ G + + D+ +V + D +
Sbjct: 1049 DAAINAALNGMSFLGEKDYAGAASVQIQTSDGALVDTDTVAITVNPVNDAPVAAEDVVYV 1108
Query: 179 YCAT-------------------------PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
T P+ + + + + + +
Sbjct: 1109 STNTDNILIPVSALLGNDVDIDGRALSINPLSLTSSTLSGLRLVTESNYSFVAFDSPNSK 1168
Query: 214 KDSPFIQTIYDSGG---DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ F T+ D G + + ++ +D + S + G ++ +
Sbjct: 1169 GVATFSYTVEDGAGGSSTATVTVNVVDKNGFSLDQASYQASYLEGGSNPDSMTGAVAGDI 1228
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+G G D++ G + ++V + ND +G G D + I ++ +
Sbjct: 1229 FIGGRGTDILNGGNGDDVLRGGADNDTLNGGIGDD--VLRGGADNDTIDGGVGIDMLDFS 1286
Query: 331 NEHKQDFLSDVERLRF------------ADQCIDS---VNVKQRSILEYTASYEDLIQVI 375
+ + ++ D + + L +++ + +
Sbjct: 1287 DATGAVSFTLIQSSTLVKVLVGATPGLGTDSYANMEGVIGSAFVDTLTGSSANDVIRGGA 1346
Query: 376 GQDVFESMKHFYEFGLSE---GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D S+ G T + G+D + I
Sbjct: 1347 GDDTINGGDGIDLLDFSDATGGVVFTLTQSGSPTTAGPGVTGLGADSYSNMEGVIGSAFN 1406
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ A + + D++ A L G
Sbjct: 1407 DNLTGSAGNDVLRGGAGNDVLVGGAGNDVLTGGAGADTLTGGNGS 1451
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/234 (15%), Positives = 71/234 (30%), Gaps = 13/234 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-GYEKNMTIAQHTV 267
+ + TI G D+LD + G ++ + + + + G + +
Sbjct: 1261 GDDVLRGGADNDTIDGGVGIDMLDFSDATGAVSFTLIQSSTLVKVLVGATPGLGTDSYAN 1320
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E V+GS+ D + G+SAN+V +G+D +G G+D + + ++
Sbjct: 1321 MEGVIGSAFVDTLTGSSANDVIRGGAGDDTINGGDGIDLLDFSDATGGVVFTLTQSGSPT 1380
Query: 328 YDANEH---KQDFLSDVE---------RLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
D S++E L + +L A + L
Sbjct: 1381 TAGPGVTGLGADSYSNMEGVIGSAFNDNLTGSAGNDVLRGGAGNDVLVGGAGNDVLTGGA 1440
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
G D F + D+ G+ D +
Sbjct: 1441 GADTLTGGNGSDTFRFLRADPASVDTITDFGAAPVASGGDVLDLSDLLSGVGVN 1494
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/252 (17%), Positives = 76/252 (30%), Gaps = 5/252 (1%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ I D+ G G + + +G + G
Sbjct: 1221 TGAVAGDIFIGGRGTDILNGGNGDDVLRGGADNDTLNGGIGDDVLRGGADNDTIDGGVGI 1280
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS-DIVAVQKIYGAPKGSLGNNIYKIEV 211
D + F S ATP + D A +
Sbjct: 1281 DMLDFSDATGAVSFTLIQSSTLVKVLVGATPGLGTDSYANMEGVIGSAFVDTLTGSSAND 1340
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ TI G DLLD + G + + S ++ G + ++ +E V
Sbjct: 1341 VIRGGAGDDTINGGDGIDLLDFSDATGGVVFTLTQSGSPTTAGPGVTGLGADSYSNMEGV 1400
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD-- 329
+GS+ ND + G++ N+V +GNDV G +G D + + +
Sbjct: 1401 IGSAFNDNLTGSAGNDVLRGGAGNDVLVGGAGND--VLTGGAGADTLTGGNGSDTFRFLR 1458
Query: 330 ANEHKQDFLSDV 341
A+ D ++D
Sbjct: 1459 ADPASVDTITDF 1470
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/230 (10%), Positives = 54/230 (23%), Gaps = 22/230 (9%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
++ G L+ + + N + + V G SG+D ++G + + F
Sbjct: 12 SISGTTSADTILSGNGNDYVSAGDGNDYVDAGNGDDIVEGGSGDDTLLGANGKDRVFGGL 71
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD----- 348
GND G +G D + + + ++ D L +AD
Sbjct: 72 GNDNLSGGNGTDAVY---GGGGDDVIGSIDGSSALYTGDNGGDTLYGDGYDSYADYLLGA 128
Query: 349 -------QCIDSVNVKQRSILEY-------TASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
++ + + G+D + G
Sbjct: 129 GHESARPGNDRIYGGNGDDLIYGDNGNNAALGGDDIIAGGNGKDTIYGEGGNDKIAGGAG 188
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
D + + + + P
Sbjct: 189 GDTLSGGSGADVFVYNAVSDSTAAGMDVITDFQRGVDHLDLRPVLGDTGF 238
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 61/207 (29%)
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
+ +D TILS N + G + + NG V G D
Sbjct: 3 TLTGSNGSDSISGTTSADTILSGNGNDYVSAGDGNDYVDAGNGDDIVEGGSGDDTLLGAN 62
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI 219
+ + + G A + I G+ G+N +
Sbjct: 63 GKDRVFGGLGNDNLSGGNGTDAVYGGGGDDVIGSIDGSSALYTGDNGGDTLYGDGYDSYA 122
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+ +G + N DL + + IA +++ G GND
Sbjct: 123 DYLLGAGHESARPGNDRIYGGNGDDLIYGDNGNNAALGGDDIIAGGNGKDTIYGEGGNDK 182
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + + SG DVF ++ D+
Sbjct: 183 IAGGAGGDTLSGGSGADVFVYNAVSDS 209
>gi|149637115|ref|XP_001506645.1| PREDICTED: similar to metalloproteinase [Ornithorhynchus anatinus]
Length = 616
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 58/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T + ++ R A W V LTFEE
Sbjct: 131 LTGQKWQHKHITYSIKNVTPKVG-------DAETRKAIRRAFDVWQNVTPLTFEEVPYSE 183
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 184 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 243
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 244 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 284
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 285 --FKLPN----DDLQGIQKIYGPPD 303
>gi|148699924|gb|EDL31871.1| matrix metallopeptidase 11, isoform CRA_b [Mus musculus]
Length = 516
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 62/195 (31%), Gaps = 52/195 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 104 LSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALQVWSEVTPLTFTEVHEGR 156
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G +GT L
Sbjct: 157 ADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGDNQGTDLL 214
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H + ++MS +F Y
Sbjct: 215 QVAAHEFGHVLGLQHT-------------------TAAKALMS--------PFYTFRYPL 247
Query: 182 TPMVSDIVAVQKIYG 196
+ D +Q +YG
Sbjct: 248 SLSPDDRRGIQHLYG 262
>gi|6678894|ref|NP_032632.1| stromelysin-3 precursor [Mus musculus]
gi|1352125|sp|Q02853|MMP11_MOUSE RecName: Full=Stromelysin-3; Short=SL-3; Short=ST3; AltName:
Full=Matrix metalloproteinase-11; Short=MMP-11; Flags:
Precursor
gi|467683|emb|CAA78248.1| stromelysin-3 [Mus musculus]
gi|74209127|dbj|BAE24956.1| unnamed protein product [Mus musculus]
gi|148699922|gb|EDL31869.1| matrix metallopeptidase 11, isoform CRA_a [Mus musculus]
gi|148699923|gb|EDL31870.1| matrix metallopeptidase 11, isoform CRA_a [Mus musculus]
Length = 492
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 62/195 (31%), Gaps = 52/195 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 104 LSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALQVWSEVTPLTFTEVHEGR 156
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G +GT L
Sbjct: 157 ADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGDNQGTDLL 214
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H + ++MS +F Y
Sbjct: 215 QVAAHEFGHVLGLQHT-------------------TAAKALMS--------PFYTFRYPL 247
Query: 182 TPMVSDIVAVQKIYG 196
+ D +Q +YG
Sbjct: 248 SLSPDDRRGIQHLYG 262
>gi|296226868|ref|XP_002759098.1| PREDICTED: matrix metalloproteinase-16 [Callithrix jacchus]
Length = 607
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 59/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|88800552|ref|ZP_01116114.1| Glycosyl transferase, family 2 [Reinekea sp. MED297]
gi|88776697|gb|EAR07910.1| Glycosyl transferase, family 2 [Reinekea sp. MED297]
Length = 493
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDL 579
D F Y+ ++ D+ A H+ G +EGR+ F+ YL Y D+
Sbjct: 410 DLFDETWYLKTYPDVQKA-------GLDAAIHYLRHGAKEGRNPGPNFDTQWYLQQYPDV 462
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRALGI 607
+ A HYI +G+ E R +
Sbjct: 463 QK----SKLNALVHYILYGIDENRKVSP 486
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
FD YL +Y D++ AA HY+ HG KEGRNP F Y+ + D+ +
Sbjct: 412 FDETWYLKTYPDVQKAGLD----AAIHYLRHGAKEGRNPGPNFDTQWYLQQYPDVQKS-- 465
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT 566
H+ +G +E R ++
Sbjct: 466 -----KLNALVHYILYGIDENRKVS 485
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
D F Y+ ++ D+ A D H+ G +EGR FD+ YL Y D
Sbjct: 409 SDLFDETWYLKTYPDVQKAGLD-------AAIHYLRHGAKEGRNPGPNFDTQWYLQQYPD 461
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDA 523
++ + A HYI +G+ E R
Sbjct: 462 VQKSKLN----ALVHYILYGIDENRKVSP 486
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 12/86 (13%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD YL +Y D++ AA HY+ HG KEGRNP F Y+ + D+ +
Sbjct: 411 LFDETWYLKTYPDVQKA----GLDAAIHYLRHGAKEGRNPGPNFDTQWYLQQYPDVQKSK 466
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ H+ +G +E R V+
Sbjct: 467 LN-------ALVHYILYGIDENRKVS 485
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
F+ YL +Y D+ AA HY+ HG KEGR G +
Sbjct: 412 FDETWYLKTYPDVQKA----GLDAAIHYLRHGAKEGRNPGPN 449
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 10/99 (10%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFD 400
R+R ++Q Y +Y D+ + ++ H+ G EGR+ FD
Sbjct: 396 RVRLSEQVELLKASDLFDETWYLKTYPDVQKA----GLDAAIHYLRHGAKEGRNPGPNFD 451
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ YL Y D++ + A HYI +G+ E R
Sbjct: 452 TQWYLQQYPDVQKS----KLNALVHYILYGIDENRKVSP 486
>gi|13027802|ref|NP_005932.2| matrix metalloproteinase-16 [Homo sapiens]
gi|109086884|ref|XP_001084206.1| PREDICTED: matrix metalloproteinase-16-like isoform 2 [Macaca
mulatta]
gi|114620829|ref|XP_001136497.1| PREDICTED: matrix metalloproteinase-16 isoform 2 [Pan troglodytes]
gi|3041669|sp|P51512|MMP16_HUMAN RecName: Full=Matrix metalloproteinase-16; Short=MMP-16; AltName:
Full=MMP-X2; AltName: Full=Membrane-type matrix
metalloproteinase 3; Short=MT-MMP 3; Short=MTMMP3;
AltName: Full=Membrane-type-3 matrix metalloproteinase;
Short=MT3-MMP; Short=MT3MMP; Flags: Precursor
gi|1209008|dbj|BAA12022.1| metalloproteinase [Homo sapiens]
gi|2424979|dbj|BAA22226.1| MT3-MMP [Homo sapiens]
gi|46854871|gb|AAH69500.1| Matrix metallopeptidase 16 (membrane-inserted) [Homo sapiens]
gi|50959771|gb|AAH75004.1| Matrix metallopeptidase 16 (membrane-inserted) [Homo sapiens]
gi|50960189|gb|AAH75005.1| Matrix metallopeptidase 16 (membrane-inserted) [Homo sapiens]
gi|62511905|gb|AAX84515.1| matrix metalloproteinase 16 (membrane-inserted) [Homo sapiens]
gi|119612057|gb|EAW91651.1| matrix metallopeptidase 16 (membrane-inserted), isoform CRA_a [Homo
sapiens]
gi|189067224|dbj|BAG36934.1| unnamed protein product [Homo sapiens]
Length = 607
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 59/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|301779359|ref|XP_002925110.1| PREDICTED: stromelysin-3-like [Ailuropoda melanoleuca]
Length = 467
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 62/196 (31%), Gaps = 54/196 (27%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIH 76
L W + Y+ + + ++ AL WS+V LTF E H
Sbjct: 73 LSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALQVWSEVTPLTFTEVHEGH 125
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G +GT L
Sbjct: 126 ADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGNNQGTDLL 183
Query: 122 HNALHEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
A HE GH LGL H P + P Y +F Y
Sbjct: 184 QVAAHEFGHVLGLQHTPAAKALMSPFY----------------------------TFRYP 215
Query: 181 ATPMVSDIVAVQKIYG 196
+ D +Q +YG
Sbjct: 216 LSLSPDDRRGIQHLYG 231
>gi|294677437|ref|YP_003578052.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294476257|gb|ADE85645.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 2065
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 55/371 (14%), Positives = 99/371 (26%), Gaps = 31/371 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ T+ GDD + D +++GG N L ++ G N +I
Sbjct: 1342 GNDTIRSGVGNDTVNAGTGDDSIEAGSGDDSVLGGEGNDTILGERGDDTLDGGAGNDSIT 1401
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+S++G +GND++ G S + GND DG G D+ + +Y
Sbjct: 1402 GGLDDDSILGGAGNDILDGRSGLDTIDGGEGNDSIDGGDGNDSV--SGGTGNDTLYGELG 1459
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQC---------------------IDSVNVKQRSIL 362
+ D + L + +
Sbjct: 1460 NDTLTGGEGRDLVDGGDGDDLIDTSGTGRPDIAYPGLYGADSDPNDDRDKVIAGTGNDTI 1519
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG-SYDDLRNVFGSDRGA 421
+ + G DV ++ G D+ S D + +D G
Sbjct: 1520 RTGDDADSIDAGQGNDVIDAGDDADTVAAGIGDDLVIGGEGSDSISGGDGNDTIYADNGP 1579
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
P + D+I D L + + + G +E
Sbjct: 1580 GTTSPTEVTDDTDPVPQNGRDTVRGGEGNDVIYGGDDDDLLSGDNGNDWIDGGIDEDTIT 1639
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
+ L ++ G + + G + L A ++ L A
Sbjct: 1640 GGEGNDTLLGGAGDDSLDGGNSSDSLD--GGAGNDTLLGGEGNDTLLGGAGNDSLDGGSA 1697
Query: 542 DAPDLVQAGKD 552
AG D
Sbjct: 1698 SDTLDGGAGDD 1708
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/482 (10%), Positives = 104/482 (21%), Gaps = 44/482 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + D D G + + LG
Sbjct: 939 TAGTGHDSVDGGAGDDSLSGEGGADTLRGGDGNDTLDGGDDNDLAVGGKGDDLLIGGLGN 998
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G G D + L S + + ++ + + +
Sbjct: 999 DTLEGGAGNDTAQGGAGDDSLTTGLGSDRAEGGDGNDYINTRNDLASPDLGYPGLV---- 1054
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ T+ G D + L + SI
Sbjct: 1055 ---------------PADTDPNDDRDTVLGGAGHDTI-------------LTGDDADSIE 1086
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N I ++V+G G+D + ++V +GND+ G G
Sbjct: 1087 GGSGNDWIDAGVDADTVLGGEGDDTITSGEGSDVVDGGAGNDIIYGGLGPTVPDIINIPD 1146
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + ++ + + D + L + D ++ + +
Sbjct: 1147 ATDLVQNNGMDTIHGGEGNDVIYGEDDDDLLYGDA--------GNDTIDGGIDEDTIFGG 1198
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D + + RD + G+ D + G D
Sbjct: 1199 TGNDSLTGGAGADQMSGGDDRDTFVVASAAAGAGDVIDGNEGGDDYDTLDLTGAGRTNIL 1258
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+P + +D ++ D D
Sbjct: 1259 YDPTNAENGTVQFLDDDGNVVGTLTFTNIENIIVDRDGIVTGTDGADLIDYDYTGDPDGD 1318
Query: 495 LR----NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+ D R G R+ + + + D L G
Sbjct: 1319 RIDHNDALIPGDGPQDDRVVAGAGNDTIRSGVGNDTVNAGTGDDSIEAGSGDDSVLGGEG 1378
Query: 551 KD 552
D
Sbjct: 1379 ND 1380
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/460 (11%), Positives = 114/460 (24%), Gaps = 42/460 (9%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ + T ++ ++ + D +
Sbjct: 771 TDTATVNVTVTPLNDAPDAVNDSAATNFQTAVTVPVLANDTDIDGDTLTVTGASSPNGTV 830
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS------ 176
+ + + D D+ + +V P+D +D +
Sbjct: 831 TVNADGTITFTPETGFTGDATITYTVSDGHGGTDTAIVTVTVGADPRDGYVDGTAGGDLI 890
Query: 177 ----FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
G MV A+ G + + T+ G D +D
Sbjct: 891 DTGYTGDPQGDMVDGNDAILPGDGPNDDRI--RAGAGDDTVLAGLGDDTVTAGTGHDSVD 948
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
GG + ++ G + N T+ + VG G+D++IG N+
Sbjct: 949 ----GGAGDDSLSGEGGADTLRGGDGNDTLDGGDDNDLAVGGKGDDLLIGGLGNDTLEGG 1004
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-------------HKQDFLS 339
+GND G +G D+ + + + N+ D
Sbjct: 1005 AGNDTAQGGAGDDSL--TTGLGSDRAEGGDGNDYINTRNDLASPDLGYPGLVPADTDPND 1062
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT- 398
D + + + +E + + + + D + EG D+
Sbjct: 1063 DRDTVLGGAGHDTILTGDDADSIEGGSGNDWIDAGVDADTVLGGEGDDTITSGEGSDVVD 1122
Query: 399 ---FDSYLYLGSYDDLRNVFGSDRGAAARH-------YITHGVKEGRNPDAFKALEYIAS 448
+ +Y G + ++ + G D L A
Sbjct: 1123 GGAGNDIIYGGLGPTVPDIINIPDATDLVQNNGMDTIHGGEGNDVIYGEDDDDLLYGDAG 1182
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
++ + + G D + + D +
Sbjct: 1183 NDTIDGGIDEDTIFGGTGNDSLTGGAGADQMSGGDDRDTF 1222
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/427 (11%), Positives = 91/427 (21%), Gaps = 24/427 (5%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ + D+ G TI I G
Sbjct: 1390 TLDGGAGNDSITGGLDDDSILGGAGNDILDGRSGLDTIDGGEGNDSIDGGDGNDSVSGGT 1449
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G +YG + + D ++D S +A +YGA
Sbjct: 1450 GNDTLYGELGNDTLTGGEGRDLVDGGDGDDLIDTSGTGRP------DIAYPGLYGADSDP 1503
Query: 202 LGNN----IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + +I G+D++D + G E
Sbjct: 1504 NDDRDKVIAGTGNDTIRTGDDADSIDAGQGNDVIDAGDDADTVA----AGIGDDLVIGGE 1559
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE--SSGNDVFDGSSGLDTFFYYAPSYL 315
+ +I+ +++ +G + +G D G G D + L
Sbjct: 1560 GSDSISGGDGNDTIYADNGPGTTSPTEVTDDTDPVPQNGRDTVRGGEGNDVIYGGDDDDL 1619
Query: 316 YKIYRFENA-----IIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ D L + + L + L
Sbjct: 1620 LSGDNGNDWIDGGIDEDTITGGEGNDTLLGGAGDDSLDGGNSSDSLDGGAGNDTLLGGEG 1679
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ L+ G D + G D N S
Sbjct: 1680 NDTLLGGAGNDSLDGGSASDTLDGGAGDDTLIGGEGDDSILGGDGNDLASGGTGQDTIRG 1739
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
G D L A ++ L VG D + D +
Sbjct: 1740 GAGDDTITGDDGDDRLYGDAGNDSLSGGQGQDLLDGGVGNDTLIGGDGVDTLLGGDDRDV 1799
Query: 488 YLGSYDD 494
++ D
Sbjct: 1800 FIVVNRD 1806
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 61/496 (12%), Positives = 106/496 (21%), Gaps = 33/496 (6%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
D ++ P + + D R G+G T+ + I G
Sbjct: 1310 DYTGDPDGDRIDHNDALIPGDGPQDDRVVAGAGNDTIRSGVGNDTVNAGTGDDSIEAGSG 1369
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G + G D D + D + G S + +
Sbjct: 1370 DDSVLGGEGNDTILGERGDDTLDGGAGNDSITGGLDDDSILGGAGNDILDGRSGLDTIDG 1429
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYIDLN 246
G G+ T+Y G+D L + G
Sbjct: 1430 GEGNDSIDGGD----GNDSVSGGTGNDTLYGELGNDTLTGGEGRDLVDGGDGDDLIDTSG 1485
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T + + V+ +GND + + GNDV D DT
Sbjct: 1486 TGRPDIAYPGLYGADSDPNDDRDKVIAGTGNDTIRTGDDADSIDAGQGNDVIDAGDDADT 1545
Query: 307 F-------FYYAPSYLYKIYRFENAIIVYDANEHKQDF---LSDVERLRFADQCIDSVNV 356
I + +Y N ++D +
Sbjct: 1546 VAAGIGDDLVIGGEGSDSISGGDGNDTIYADNGPGTTSPTEVTDDTDPVPQNGRDTVRGG 1605
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ ++ + L G D + EG D
Sbjct: 1606 EGNDVIYGGDDDDLLSGDNGNDWIDGGIDEDTITGGEGNDTLLGGAGDDSL--------- 1656
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
++ G + L A ++ L A G D +
Sbjct: 1657 DGGNSSDSLDGGAGNDTLLGGEGNDTLLGGAGNDSLDGGSASDTLDGGAGDDTLIGGEGD 1716
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ + L G G+ G +L + L
Sbjct: 1717 DSILGGDGNDLASGGTGQDTIRGGAGDDTIT---GDDGDDRLYGDAGNDSLSGGQGQDLL 1773
Query: 537 INAFADAPDLVQAGKD 552
+ + G D
Sbjct: 1774 DGGVGNDTLIGGDGVD 1789
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 54/194 (27%), Gaps = 7/194 (3%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
D + S+ N TI ++V G GND++ G + N++ + +G+D F G +G
Sbjct: 188 DYRGGNADSVVAGAGNDTIRSGAAADTVHGEDGNDLIDGGADNDLLYGGAGDDTFVGGAG 247
Query: 304 LDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
DTF + + + + S ++ + ++ V
Sbjct: 248 NDTFNGGTGLDVIDYSKSGAAVNVDLSTGALSGGDAAGDSIASGIDGVIGSEFNDSLVGF 307
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ + G D D D G
Sbjct: 308 DHQGTSASDTYTNVFHGMDGDDTIRGQGSDDSLYGGADDDSIEGGAGNDYIEGDGDLDSG 367
Query: 417 SDRGAAARHYITHG 430
+ + G
Sbjct: 368 AAPVDLTMDWQKFG 381
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 37/269 (13%), Positives = 71/269 (26%), Gaps = 13/269 (4%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ G+ T+ I
Sbjct: 1558 GEGSDSISGGDGNDTIYADNGPGTTSPTEVTDDTDPVPQNGRDTVRGGEGNDVIYGG--- 1614
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G +D + D+ + + + D+ G ++ + +
Sbjct: 1615 DDDDLLSGDNGNDWIDGGIDEDTITGGEGNDTLLGGAGDDSLDGGNSSDSLDGGAGNDTL 1674
Query: 195 YGA--PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNT 247
G LG T+ GDD L D +++GG N +
Sbjct: 1675 LGGEGNDTLLGG---AGNDSLDGGSASDTLDGGAGDDTLIGGEGDDSILGGDGNDLASGG 1731
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+I G + TI + + G +GND + G ++ GND G G+DT
Sbjct: 1732 TGQDTIRGGAGDDTITGDDGDDRLYGDAGNDSLSGGQGQDLLDGGVGNDTLIGGDGVDTL 1791
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQD 336
++ + + + D
Sbjct: 1792 LGGDDRDVFIVVNRDGGNHDFIDGNEGGD 1820
>gi|119488995|ref|ZP_01621930.1| type I secretion target repeat protein [Lyngbya sp. PCC 8106]
gi|119454951|gb|EAW36094.1| type I secretion target repeat protein [Lyngbya sp. PCC 8106]
Length = 1525
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 56/470 (11%), Positives = 104/470 (22%), Gaps = 57/470 (12%)
Query: 83 SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
S G D G G +++ + ++ G G
Sbjct: 1022 FSGLGGNDYIDGRDGDDTLDGGTGDDNLIGGKGNDSLIGQDGNDDLDGQEGNDFLDGGKG 1081
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+ G D +D G D ++ ++ + G
Sbjct: 1082 EDVLLGEAGDDTLYGQADGDDLDGGEGHDYLDGGEG-------DDFLSGREGHDELFGRE 1134
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++ T+ G D+L G I S+ G ++N +
Sbjct: 1135 GDD------YLSGGSGNDTLQGEAGMDVL----FGEAGKDILYGGTGEDSLFGGDQNDFL 1184
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G +GND + G + + GND G+ DT + +
Sbjct: 1185 DGGEDRDFLDGGNGNDDLYGRQGEDTLYGGKGNDFIWGNEDKDTLYGDEGND----ILDG 1240
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+D L +L+ + L G D
Sbjct: 1241 GEDNDILDGGDGRDELWG------QTGEDTLYGGNGHDLLDGGEDSDQLNGGTGHDKLYG 1294
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ + EG+D + D + + A G D
Sbjct: 1295 RQGADDLTGGEGKDSLWGHEDSDHLRGDGGDDYLDGGQADDILDGGDGQDILLGDDGNDE 1354
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
L ++ L D G ++
Sbjct: 1355 LFGGKHNDLLDGGEGQDTLSGGENNDQLYGQGGDDELT---------------------- 1392
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G L ++ LI + G +
Sbjct: 1393 --------GEAGKDTLDGGLGNDTLNGGEHNDRLIGGDGNDILAGGEGVN 1434
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 69/488 (14%), Positives = 110/488 (22%), Gaps = 15/488 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D I N + DS D D+ G +I E+ G
Sbjct: 826 SGGDGDDILKGNQDNDIIKGDSGNDQIEGNDGNDIIEGNDGDDSISGGVGQDELYGNDGN 885
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G +YG + Y + + D +
Sbjct: 886 DQINGDAGKDSLYGGNGADLLAGDDGEDEVYGNDGEDTLSGGEADDLLYGDKDNDTIYGD 945
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G G I + D G L GG + E ++
Sbjct: 946 NGDDFIVGGEGADSINGGEGDDTASFFTSSLGVIADLTTGGGGGSGDSRGDRYEGIENLE 1005
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E + G GND + G ++ +G+D G G D+ +
Sbjct: 1006 GSEFRDRLIGDANDNKFSGLGGNDYIDGRDGDDTLDGGTGDDNLIGGKGNDSLIGQDGND 1065
Query: 315 LYKIYRF-----ENAIIVYDANEHKQDFLSDVERLRFADQCIDSV---NVKQRSILEYTA 366
E D L D + L
Sbjct: 1066 DLDGQEGNDFLDGGKGEDVLLGEAGDDTLYGQADGDDLDGGEGHDYLDGGEGDDFLSGRE 1125
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS--YLYLGSYDDLRNVFGSDRGAAAR 424
+++L G D G D+ F L ++FG D+
Sbjct: 1126 GHDELFGREGDDYLSGGSGNDTLQGEAGMDVLFGEAGKDILYGGTGEDSLFGGDQNDFLD 1185
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+G N + L + L + KD + D
Sbjct: 1186 GGEDRDFLDGGNGN--DDLYGRQGEDTLYGGKGNDFIWGNEDKDTLYGDEGNDILDGGED 1243
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
+ + D R+ + Y +G + L H+ L
Sbjct: 1244 ND--ILDGGDGRDEL-WGQTGEDTLYGGNGHDLLDGGEDSDQLNGGTGHDKLYGRQGADD 1300
Query: 545 DLVQAGKD 552
GKD
Sbjct: 1301 LTGGEGKD 1308
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 74/545 (13%), Positives = 131/545 (24%), Gaps = 43/545 (7%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+D + + D D G + I G G + G D
Sbjct: 482 GFDHKRDIFYGGDGIDEINGNGGDDFLHGEGGGDIIHGYQGQDEIHGGGGLDFISGGDES 541
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
S + + + G+ D + G GN+I
Sbjct: 542 DTLYGEDESDKIHGDGGNDYIYGGNGWDELQGHGDDDYI-------SGGEGNDIIHGHQG 594
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
Q + + G D D+ L G ++ I SI G E I + + +
Sbjct: 595 QDEIHGGGGLDFISGGDESDI-LYGEDESDIIHGDGGNDSIYGGEGWDEIQGNDGDDYLR 653
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-N 331
G G D++ G + ++ G+D G G D F + KIY +Y
Sbjct: 654 GEGGKDLIFGGNGDDNITGGDGDDEIWGFYGNDLIFGDSGFGHDKIYGEYGDDSLYGRVG 713
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D +++ + + + + + D+ E
Sbjct: 714 NDSISGGDDQDQIFGEEGADQLEGNRGEDYISGGEGNDAIAGNEDNDIIEGGLGEDNISG 773
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
EG D+ D + G D+ G++ ED
Sbjct: 774 GEGN----DAIAGNEDNDIISGGLGDDKITGNDGNDQIEGNGGQDLIEGGL------GED 823
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
I+ L + + D + D ++ G Y
Sbjct: 824 NISGGDGDDILKGNQDNDIIKGDSGNDQIEGNDGNDIIEGNDGDDSISGGVGQDEL--YG 881
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
G + +L + L + G+D E + +
Sbjct: 882 NDGNDQINGDAGKDSLYGGNGADLLAGDDGEDEVYGNDGED---TLSGGEADDLLYGDKD 938
Query: 572 YLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLS 631
T Y D + F A S + L +
Sbjct: 939 NDTIYGDNGDDFIVGGEGA-------------------DSINGGEGDDTASFFTSSLGVI 979
Query: 632 FDHKK 636
D
Sbjct: 980 ADLTT 984
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 48/384 (12%), Positives = 92/384 (23%), Gaps = 42/384 (10%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D G + + + G+ G +YG
Sbjct: 1113 DGGEGDDFLSGREGHDELFGREGDDYLSGGSGNDTLQGEAGMDVLFGEAGKDILYGGTG- 1171
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
DS + F+ D G + +YG K
Sbjct: 1172 --EDSLFGGDQNDFLDGGEDRDFLDGGNGNDDLYGRQGEDTLYGG----------KGNDF 1219
Query: 213 QKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ T+Y G+D+LD L GG ++ G + +
Sbjct: 1220 IWGNEDKDTLYGDEGNDILDGGEDNDILDGGDGRDELWGQTGEDTLYGGNGHDLLDGGED 1279
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------------FYYA 311
+ + G +G+D + G + G D G D
Sbjct: 1280 SDQLNGGTGHDKLYGRQGADDLTGGEGKDSLWGHEDSDHLRGDGGDDYLDGGQADDILDG 1339
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + ++ + D + L + L A +
Sbjct: 1340 GDGQDILLGDDGNDELFGGKHNDLLDGGEGQDTLSGGENNDQLYGQGGDDELTGEAGKDT 1399
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L +G D +H +G DI L + + + G + G
Sbjct: 1400 LDGGLGNDTLNGGEHNDRLIGGDGNDI-------LAGGEGVNTLTGGSGQDEFELFFGDG 1452
Query: 431 VKEGRNPDAFKALEYIASHEDLIN 454
+ + + +A L +
Sbjct: 1453 YQLILDFLPSQDSFKLAEGLTLDS 1476
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/320 (14%), Positives = 90/320 (28%), Gaps = 21/320 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S +G + + + + ++G NDV+ GN +++ SG D+ DG G+D Y
Sbjct: 370 SRLGTEDDDWIVGSSESNDQLLGLGRNDVLRGNDGDDILVGGSGYDLLDGGEGIDIADYS 429
Query: 311 APSYLYK--------IYRFENAIIVYDANEHKQDFLSDVERLR----------FADQCID 352
+ I + D + DVE ++ F +
Sbjct: 430 SYPSSLTPEGIVVNPSQVAGVEIYEINDGWGTTDTVLDVEIIQGSLHRDVMNGFDHKRDI 489
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
+ + L G D+ + E G D Y +
Sbjct: 490 FYGGDGIDEINGNGGDDFLHGEGGGDIIHGYQGQDEIHGGGGLDFISGGDESDTLYGEDE 549
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ G Y +G E + + + D+I+ ++ G F +
Sbjct: 550 SDKIHGDGGNDYIYGGNGWDELQGHGDDDYISGGEGN-DIIHGHQGQDEIHGGGGLDFIS 608
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
G E D + +++G + + G R +
Sbjct: 609 GGDESDILYGEDESDIIHGDGGNDSIYGGEGWDEIQ--GNDGDDYLRGEGGKDLIFGGNG 666
Query: 533 HEDLINAFADAPDLVQAGKD 552
+++ D G D
Sbjct: 667 DDNITGGDGDDEIWGFYGND 686
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/378 (11%), Positives = 85/378 (22%), Gaps = 21/378 (5%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
P G IY+I + + + G D+ K I + I G
Sbjct: 444 PSQVAGVEIYEINDGWGTTDTVLDVEIIQGSLHRDVMNGFDHKRDIFYGGDGIDEINGNG 503
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + + + G G D + G + +D G D +
Sbjct: 504 GDDFLHGEGGGDIIHGYQGQDEIHGGGGLDFISGGDESDTLYGEDESDKI--HGDGGNDY 561
Query: 318 IYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
IY + + + + + + + L
Sbjct: 562 IYGGNGWDELQGHGDDDYISGGEGNDIIHGHQGQDEIHGGGGLDFISGGDESDILYGEDE 621
Query: 377 QDVFESMKHFYEFGLSEGRDITFD-------------SYLYLGSYDDLRNVFGSDRGAAA 423
D+ EG D ++ G+ DD N+ G D
Sbjct: 622 SDIIHGDGGNDSIYGGEGWDEIQGNDGDDYLRGEGGKDLIFGGNGDD--NITGGDGDDEI 679
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ + + G + + + L + +D +
Sbjct: 680 WGFYGNDLIFGDSGFGHDKIYGEYGDDSLYGRVGNDSISGGDDQDQIFGEEGADQLEGNR 739
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
G + D G + A+ ++ + D
Sbjct: 740 GEDYISGGEGNDAIAGNEDNDIIE---GGLGEDNISGGEGNDAIAGNEDNDIISGGLGDD 796
Query: 544 PDLVQAGKDHFSNFGYEE 561
G D G ++
Sbjct: 797 KITGNDGNDQIEGNGGQD 814
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/242 (15%), Positives = 62/242 (25%), Gaps = 12/242 (4%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ + D D G+ T+ N +
Sbjct: 1228 TLYGDEGNDILDGGEDNDILDGGDGRDELWGQTGEDTLYGGNGHDLLDGGEDSDQLNGGT 1287
Query: 142 GGYPVYGV--DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
G +YG +D S+ + D Y DI+
Sbjct: 1288 GHDKLYGRQGADDLTGGEGKDSLWGHEDSDHLRGDGGDDYLDGGQADDILDGGD---GQD 1344
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
LG++ + + G D L GG N + G
Sbjct: 1345 ILLGDD---GNDELFGGKHNDLLDGGEGQDTL----SGGENNDQLYGQGGDDELTGEAGK 1397
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ +++ G ND +IG N++ G + G SG D F + I
Sbjct: 1398 DTLDGGLGNDTLNGGEHNDRLIGGDGNDILAGGEGVNTLTGGSGQDEFELFFGDGYQLIL 1457
Query: 320 RF 321
F
Sbjct: 1458 DF 1459
>gi|119909610|ref|XP_584877.3| PREDICTED: matrix metallopeptidase 11-like [Bos taurus]
gi|297485001|ref|XP_002694738.1| PREDICTED: matrix metallopeptidase 11-like [Bos taurus]
gi|296478350|gb|DAA20465.1| matrix metallopeptidase 11-like [Bos taurus]
Length = 466
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 61/195 (31%), Gaps = 52/195 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + Y+ L ++ AL WS V LTF E
Sbjct: 78 LSGGRWEKTDLTYRILRFPWQL-------LREQVRQTVAEALQVWSDVTPLTFTEVHEGR 130
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G +GT L
Sbjct: 131 ADIVIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGDNQGTDLL 188
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H + ++MS +F Y
Sbjct: 189 QVAAHEFGHVLGLQHT-------------------TAAKALMS--------PFYTFRYPL 221
Query: 182 TPMVSDIVAVQKIYG 196
+ D +Q++YG
Sbjct: 222 SLSPDDRRGIQQLYG 236
>gi|83643505|ref|YP_431940.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
gi|83631548|gb|ABC27515.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
Length = 2408
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/440 (14%), Positives = 111/440 (25%), Gaps = 43/440 (9%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T + DV G K + + G G H + +G +
Sbjct: 871 NDTISGGAGSDQIYGHGGDDVIDGGADKD-YIWGDHDKLAGEFHGNDHIDAGDGEGQIII 929
Query: 149 VDNDYEND------SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+ + + +Y + +F TP D +G +
Sbjct: 930 GGGGSDVILSGSGRDMIWADSTYDATSITSNGNTFVAPTTPQGLDEA----FHGDDEVHA 985
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G + Q IY G+D++ + + G + I
Sbjct: 986 G----GGDDQILAGAGNDRIYGDAGEDVIY-------------GIAGNNYLDGGDDKDFI 1028
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
I+ +VG +G D + GN ++ G D G G DT + E
Sbjct: 1029 YGGVDIDHIVGGAGADTLYGNKGDDWLQGGLGGDFLYGDEGNDTL--DGGGEGDVLAGGE 1086
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + D E + I + S + + + G +
Sbjct: 1087 GDDTYIVKRGYGVTHIKDEEGIS----TIKFADTYASSTINVIQGEDKVTIRYGAEGDAV 1142
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ F + + D+ D G G+ I KE
Sbjct: 1143 VMSTQTF--KNAKLVLADTRGPATPGYDAAGSEGPVSGSLNNDVIDFSDKE------SDT 1194
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF-VTFDSYLYLGSYDDLRNVFGS 501
Y D++ L G D + G R + Y N
Sbjct: 1195 SIYAGEGNDILYGGTGDDKLFGEGGDDTLDGGLGNDRLNGGLGADTYNVEIVGGFNDIID 1254
Query: 502 DRGAAARHYITHGVKEGRNP 521
+ G+ H GV +
Sbjct: 1255 ETGSDKNHLNITGVDSLDDL 1274
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 31/83 (37%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
E+ + G + +++ G GND + G ++ +GND +G G D
Sbjct: 409 GGETNDELVGGAGGDWLFGLAGDDTLKGEGGNDELYGGDGHDTLEGGAGNDRLEGGIGDD 468
Query: 306 TFFYYAPSYLYKIYRFENAIIVY 328
T+ Y + + A +
Sbjct: 469 TYVYTKGDGADYLLDYNGANRIL 491
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 51/390 (13%), Positives = 100/390 (25%), Gaps = 44/390 (11%)
Query: 192 QKIYGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ YG G++ Y + + + G D + L G + + +
Sbjct: 663 DQFYGG--HQSGDSFYGRAGDDFMDGAAGSDLLVGGSGSDRI-LGGSGNDWIWGNDSQRL 719
Query: 250 WSSIGGYEKNMT------------------IAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ G N I+ ++++G GND++ G + ++
Sbjct: 720 FDDTGAPTPNYAKESASSEDYLDGGDGDDWISGDEGNDTLLGGKGNDLLSGGAGADMISG 779
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFAD 348
G+D G S + + S ++ + + D LS E R+
Sbjct: 780 GEGDDHIHGDSRNE--YRSNASSGSAQISNDDLLTEVEEGVSYDDVLSGGEGADRIWGEA 837
Query: 349 QCIDSVNVKQRSILEYTASY----EDLIQVI-GQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ IL S DL ++ G D + G D+
Sbjct: 838 GSDVIDGGEGDDILWGDRSQVTDLPDLDPLLHGNDTISGGAGSDQIYGHGGDDVIDGGAD 897
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
+ D + G G + + + + + +
Sbjct: 898 KDYIWGDHDKLAGEFHGNDHIDAGDGEGQIIIGGGGSDVILSGSGRDMIWADSTYDATSI 957
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
+ F +G F D++ G D+ A G
Sbjct: 958 TSNGNTFVAPTTPQGLDEAFHGD------DEVHAGGGDDQILA-----GAGNDRIYGDAG 1006
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ IA + L DH
Sbjct: 1007 EDVIYGIAGNNYLDGGDDKDFIYGGVDIDH 1036
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/258 (14%), Positives = 76/258 (29%), Gaps = 23/258 (8%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH---- 136
S+ + + D G T+ + LG
Sbjct: 1185 IDFSDKESDTSIYAGEGNDILYGGTGDDKLFGEGGDDTLDGGLGNDRLNGGLGADTYNVE 1244
Query: 137 -PGSYNGGYPVYGVDNDYEN----DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G +N G D ++ N DS V++ ++ + + ++
Sbjct: 1245 IVGGFNDIIDETGSDKNHLNITGVDSLDDLVVTNDREWGLVITTRQINARSLWLGNLPEH 1304
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ G + + + +LD + G + I ES +
Sbjct: 1305 YHLEGITTYDIALPALGLNLDSDA--------------ILDKLMEGNSFSQIIRGNESAN 1350
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I + + + + + G SG D + G N+V + ND G +G D + Y +
Sbjct: 1351 VITAEGGDDNVHSYGGNDYLYGGSGQDYLNGGDDNDVIYGGRDNDELQGGNGDDVYVYQS 1410
Query: 312 PSYLYKIYRFENAIIVYD 329
+ I ++ + D
Sbjct: 1411 GDGVDTIVLNKSGLGDKD 1428
Score = 43.6 bits (101), Expect = 0.094, Method: Composition-based stats.
Identities = 45/381 (11%), Positives = 89/381 (23%), Gaps = 72/381 (18%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ AD G + + G G + G
Sbjct: 1026 DFIYGGVDIDHIVGGAGADTLYGNKGDDWLQGGLGGDFLYGDEGNDTLDGGGEGDVLAGG 1085
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA----VQKIYGAPKGSLGNN 205
+ D +++ ++ + F +++ V YGA ++ +
Sbjct: 1086 EGDDTYIVKRGYGVTHIKDEEGISTIKFADTYASSTINVIQGEDKVTIRYGAEGDAVVMS 1145
Query: 206 IYKI--------EVQQKDSPFIQT------IYDSGGDDLLDLT-------LIGGVKNYID 244
+ + +P + S +D++D + + G N I
Sbjct: 1146 TQTFKNAKLVLADTRGPATPGYDAAGSEGPVSGSLNNDVIDFSDKESDTSIYAGEGNDIL 1205
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV--VIGNSANNVFFESSGND----VF 298
+ G + T+ + + G G D V N + +G+D
Sbjct: 1206 YGGTGDDKLFGEGGDDTLDGGLGNDRLNGGLGADTYNVEIVGGFNDIIDETGSDKNHLNI 1265
Query: 299 DGSSGLDTFFYYAPS--YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA--------- 347
G LD L R NA ++ N + L + A
Sbjct: 1266 TGVDSLDDLVVTNDREWGLVITTRQINARSLWLGNLPEHYHLEGITTYDIALPALGLNLD 1325
Query: 348 ------------------------------DQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + L + + L
Sbjct: 1326 SDAILDKLMEGNSFSQIIRGNESANVITAEGGDDNVHSYGGNDYLYGGSGQDYLNGGDDN 1385
Query: 378 DVFESMKHFYEFGLSEGRDIT 398
DV + E G D+
Sbjct: 1386 DVIYGGRDNDELQGGNGDDVY 1406
Score = 39.0 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 7/79 (8%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRF 321
ES+ G ND ++G + + F +G+D G G D + + ++
Sbjct: 405 ESIEGGETNDELVGGAGGDWLFGLAGDDTLKGEGGNDELYGGDGHDTLEGGAGNDRLEGG 464
Query: 322 ENAIIVYDANEHKQDFLSD 340
D+L D
Sbjct: 465 IGDDTYVYTKGDGADYLLD 483
>gi|291297795|ref|YP_003509073.1| hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
gi|290567015|gb|ADD39980.1| Hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
Length = 729
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 58/201 (28%), Gaps = 16/201 (7%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDL------LDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ +GG + ++ S+ G
Sbjct: 324 TAMGDNNNVSTGDGKDNVETTGGYNSTGRGGDFVRAGNHNDNPFLKGMDVHESTTFGGTG 383
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ I T + + SG+D V G+ +++ +G+D DG G D + +
Sbjct: 384 DDEIQGSTKDDKISAGSGDDQVYGHEGDDLVDGGAGHDYLDGQDGDDNI--SGGADKDTV 441
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
Y + + + +D+L E + ++ ++L G D
Sbjct: 442 YGLDGDDTLTGGS--GRDYLEGAE------GNDTIGGGTEEDVVSGGRGDDNLHGDDGDD 493
Query: 379 VFESMKHFYEFGLSEGRDITF 399
V + EG D F
Sbjct: 494 VMYAGAGKDTLDGGEGNDKQF 514
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/217 (11%), Positives = 53/217 (24%), Gaps = 9/217 (4%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT----- 306
+I G + + I + +++ +GND V NN G D + + G ++
Sbjct: 295 TIIGGDGDDRIVVNGENKNISSGAGNDKVTAMGDNNNVSTGDGKDNVETTGGYNSTGRGG 354
Query: 307 -FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSIL 362
F + + D + +++ + ++
Sbjct: 355 DFVRAGNHNDNPFLKGMDVHESTTFGGTGDDEIQGSTKDDKISAGSGDDQVYGHEGDDLV 414
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ A ++ L G D +G D N
Sbjct: 415 DGGAGHDYLDGQDGDDNISGGADKDTVYGLDGDDTLTGGSGRDYLEGAEGNDTIGGGTEE 474
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
G D + A + L +
Sbjct: 475 DVVSGGRGDDNLHGDDGDDVMYAGAGKDTLDGGEGND 511
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 55/257 (21%), Gaps = 5/257 (1%)
Query: 298 FDGSSGLDTFFYYAP-SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G G D + E + D QD + + D V
Sbjct: 249 IRGGEGDDEVTINPSVKSDVTVLGGEGKDQIVDNGLPGQDPSTGPRTIIGGDGDDRIVVN 308
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG-RDITFDSYLYLGSYDDLRNVF 415
+ + A + + + + + + G +
Sbjct: 309 GENKNISSGAGNDKVTAMGDNNNVSTGDGKDNVETTGGYNSTGRGGDFVRAGNHNDNPFL 368
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ + G E + + + + + D G D+
Sbjct: 369 KGMDVHESTTFGGTGDDEIQGSTKDDKISAGSGDDQVYGHEGDDLVDGGAGHDYLDGQDG 428
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
++ D G D GS R G + ++
Sbjct: 429 DDNISGGADKDTVYGLDGDDTLTGGSGRDYLE---GAEGNDTIGGGTEEDVVSGGRGDDN 485
Query: 536 LINAFADAPDLVQAGKD 552
L D AGKD
Sbjct: 486 LHGDDGDDVMYAGAGKD 502
>gi|254475165|ref|ZP_05088551.1| glycerophosphoryl diester phosphodiesterase [Ruegeria sp. R11]
gi|214029408|gb|EEB70243.1| glycerophosphoryl diester phosphodiesterase [Ruegeria sp. R11]
Length = 455
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/311 (15%), Positives = 85/311 (27%), Gaps = 23/311 (7%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
G + + I FD D R G G TI + L S+
Sbjct: 104 AGDDSYTSHWNGGERIITFDGNDTIRAGSGDDTIFGGAGIDSFVITPSLP-GYSFAFNDI 162
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
V E L V + ++ + S I A + + G G++
Sbjct: 163 VGATVTTSEGRDMLFGVEILKIGGQTLHLREGSDGDDLLTSSINAPRGMRDMIHGRDGDD 222
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ G D + + I G + T+ +
Sbjct: 223 T------ITGGAGQDFLIGGAGHDRIA-------------GGSNHDLIEGGFGDDTLIGN 263
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + V G G D+++ + + +G+D DG G D + + +
Sbjct: 264 SGRDVVRGDHGADLLLAGNGRDHLLGGAGSDTLDGGRGRDHL--DGGADADLLRAGQGND 321
Query: 326 IVYDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
V ++ + LR + + L + + LI G D
Sbjct: 322 TVLGDAGDDTLMGNNGRDVLRGDGGDDLILGGRGADTLFGSDGADRLIGQTGNDRLTGGS 381
Query: 385 HFYEFGLSEGR 395
H F S G
Sbjct: 382 HADTFVFSRGH 392
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 78/300 (26%), Gaps = 30/300 (10%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+G + +I N+ SG+D G +G+D+F Y + F + +
Sbjct: 114 NGGERIITFDGNDTIRAGSGDDTIFGGAGIDSFVITPSLPGYS-FAFNDIVGATVTTSEG 172
Query: 335 QDFLSDVERLRFADQCI-DSVNVKQRSILEYTAS-----YEDLIQVIGQDVFESMKHFYE 388
+D L VE L+ Q + +L + + + + G D
Sbjct: 173 RDMLFGVEILKIGGQTLHLREGSDGDDLLTSSINAPRGMRDMIHGRDGDDTITGGAGQDF 232
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G D + GS DL D G R L
Sbjct: 233 LIGGAGHD-----RIAGGSNHDLIEGGFGDDTL----IGNSGRDVVRGDHGADLLLAGNG 283
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ L+ G+DH D D + G D
Sbjct: 284 RDHLLGGAGSDTLDGGRGRDHLDGG-------ADADLLRAGQGNDTVLGDAGDDTLM--- 333
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
+G R + + L + + Q G D G + F+
Sbjct: 334 --GNNGRDVLRGDGGDDLILGGRGADTLFGSDGADRLIGQTGND--RLTGGSHADTFVFS 389
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 38/120 (31%), Gaps = 5/120 (4%)
Query: 215 DSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+ G D LD L G N L ++ G + +
Sbjct: 289 GGAGSDTLDGGRGRDHLDGGADADLLRAGQGNDTVLGDAGDDTLMGNNGRDVLRGDGGDD 348
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++G G D + G+ + +GND G S DTF + I F V +
Sbjct: 349 LILGGRGADTLFGSDGADRLIGQTGNDRLTGGSHADTFVFSRGHGHDTITDFRIGEDVIE 408
>gi|291543330|emb|CBL16439.1| Hemolysin-type calcium-binding repeat (2 copies) [Ruminococcus sp.
18P13]
Length = 888
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 60/483 (12%), Positives = 110/483 (22%), Gaps = 16/483 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + + + ++ R G TI + G
Sbjct: 216 GGDGNDTITGGDNLNFIYGGDGDDTITGGNGINIIRGEGGDDTITDGTGDGYLDGGDGND 275
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G + G + + D + G + +
Sbjct: 276 TIHAGAGNDILIGGAGNDRLFGEDGDDVIAGNDGDDYLSGGDGNDTLYADAGNDELHGGN 335
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G+ + + G D L GG N I + E + I G
Sbjct: 336 GNDSLFGGD----GDDTLYGDAGDDYLEAGNGTDTL----YGGTGNDIFVGGEGINYIYG 387
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N T + + G G+D G + +GND +G +G + +
Sbjct: 388 EDGNDTFYGGNGLNYMYGGDGDDNFTGGELADYIEGGAGNDTMNGGNGNNEMY--GGDGD 445
Query: 316 YKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
IY + +Y N+ + + + L + I+ L
Sbjct: 446 DYIYGGDGDDYIYGGNDDDYIEGGNGDDHLYGGNGVNTIYGGAGNDIIYSGDHGSFLYGG 505
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDS---YLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D + G D Y+ + + + V
Sbjct: 506 DGNDRIYAGGGADVLDGGAGNDYLQGDHGGDTYIFGIGYDIDTINASADLNTIRIHGYTV 565
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+ N I E + F+ +E +D
Sbjct: 566 ADMHNTRMANNDLVIDFGEGTGDRLVIQGFFNFNSNRDFNFVFDDETVLGQYDIQAASAP 625
Query: 492 --YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D + G L A ++ L + A
Sbjct: 626 IIGTDADEWLAIQGNDGGVIHAGAGNDGLSGGSGNDELYGEAGNDTLYGNDGNDMLDGGA 685
Query: 550 GKD 552
G D
Sbjct: 686 GND 688
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 63/486 (12%), Positives = 108/486 (22%), Gaps = 32/486 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + D G G T +
Sbjct: 68 YGGDGNDMLDGGEGNDILDGGEGDDSLSGGTGDDTLSGGDGDDTYYINADHGNDTI---Y 124
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV--AVQ 192
G + DY + S +S + + + P D
Sbjct: 125 DSEGRSTLVFGDELSAEDYALRIDIHSGISLVHHETGETISIPDFINMPEYYDFTFDGEA 184
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNT 247
+I G + I G+D + + GG +
Sbjct: 185 QIIGGGDSRQVIEGTDEDDVITGGSGFNIIKGGDGNDTITGGDNLNFIYGGDGDDTITGG 244
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ I G + TI T + G GND + + N++ +GND G G D
Sbjct: 245 NGINIIRGEGGDDTITDGTGDGYLDGGDGNDTIHAGAGNDILIGGAGNDRLFGEDGDD-- 302
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + +Y + L
Sbjct: 303 VIAGNDGDDYLSGGDGNDTLYADA-----------------GNDELHGGNGNDSLFGGDG 345
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ L G D E+ G DI Y + N Y
Sbjct: 346 DDTLYGDAGDDYLEAGNGTDTLYGGTGNDIFVGGEGINYIYGEDGNDTFYGGNGLNYMYG 405
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
G + +E A ++ + + G D+ ++ + D
Sbjct: 406 GDGDDNFTGGELADYIEGGAGNDTMNGGNGNNEMYGGDGDDYIYGGDGDDYIYGGNDDDY 465
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
G D G+ Y G + D L ++ +
Sbjct: 466 IEGGNGDDHLYGGNGVNTI---YGGAGNDIIYSGDHGSFLYGGDGNDRIYAGGGADVLDG 522
Query: 548 QAGKDH 553
AG D+
Sbjct: 523 GAGNDY 528
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 66/491 (13%), Positives = 120/491 (24%), Gaps = 33/491 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + R + + G G TI + + G
Sbjct: 233 YGGDGDDTITGGNGINIIRGEGGDDTITDGTGDGYLDGGDGNDTIHAGAGNDILIGGAGN 292
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G + G D D + Y + + G + +
Sbjct: 293 DRLFGEDGDDVIAGNDGDDYLSGGDGNDTLYADAGNDELHGGNGNDSLFGGDGDDTLYGD 352
Query: 195 YGAPKGSLGNNIYK-----IEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYID 244
G GN I IY G+D GG +
Sbjct: 353 AGDDYLEAGNGTDTLYGGTGNDIFVGGEGINYIYGEDGNDTFYGGNGLNYMYGGDGDDNF 412
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
E I G N T+ + G G+D + G ++ + + +D +G +G
Sbjct: 413 TGGELADYIEGGAGNDTMNGGNGNNEMYGGDGDDYIYGGDGDDYIYGGNDDDYIEGGNGD 472
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D + + + IY I+Y + L D +L+
Sbjct: 473 DHLY--GGNGVNTIYGGAGNDIIYSGDHGS--------FLYGGDGNDRIYAGGGADVLDG 522
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
A + L G D + + I + L + A
Sbjct: 523 GAGNDYLQGDHGGDTYIFGIGYDI------DTINASADLNTIRIHGYTVADMHNTRMANN 576
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ + + + S+ D F D L Q + + D
Sbjct: 577 DLVIDFGEGTGDRLVIQGFFNFNSNRDFNFVFDDETVLGQ------YDIQAASAPIIGTD 630
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
+ +L + V + G G E L ++ L +
Sbjct: 631 ADEWLAIQGNDGGVIHAGAG-NDGLSGGSGNDELYGEAGNDTLYGNDGNDMLDGGAGNDS 689
Query: 545 DLVQAGKDHFS 555
G+D +
Sbjct: 690 LNGGNGEDTYI 700
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 64/499 (12%), Positives = 123/499 (24%), Gaps = 61/499 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ IY G+D ++ G N +I G E + +
Sbjct: 18 GDDAIIGGEGNDLIYGGDGNDTIE----GNTGNDTIYGGSGNDTITGNEGDDMLYGGDGN 73
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G GND++ G ++ +G+D G G DT++ A IY E +
Sbjct: 74 DMLDGGEGNDILDGGEGDDSLSGGTGDDTLSGGDGDDTYYINADHGNDTIYDSEGRSTLV 133
Query: 329 DANE-HKQDFLSDVER----------------------------LRFADQCIDSVNVKQR 359
+E +D+ ++ F + R
Sbjct: 134 FGDELSAEDYALRIDIHSGISLVHHETGETISIPDFINMPEYYDFTFDGEAQIIGGGDSR 193
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVF 415
++E T + + G ++ + + + + D + G+ ++
Sbjct: 194 QVIEGTDEDDVITGGSGFNIIKGGDGNDTITGGDNLNFIYGGDGDDTITGGNGINIIRGE 253
Query: 416 GSD--RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
G D G A + + F + D V G D
Sbjct: 254 GGDDTITDGTGDGYLDGGDGNDTIHAGAGNDILIGGAGNDRLFGEDGDDVIAGNDGDDYL 313
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
+G + + N Y G + L +
Sbjct: 314 SGGDGNDTLYADAGNDELHGGNGNDSLFGGDGDDTLYGDAGDDYLEAGNGTDTLYGGTGN 373
Query: 534 EDLINAFADAPDLVQAGKDHF-----SNFGYEEGRSITFNP---DLYLTSYDDLWNVFGS 585
+ + + G D F N+ Y F Y+ + G
Sbjct: 374 DIFVGGEGINYIYGEDGNDTFYGGNGLNYMYGGDGDDNFTGGELADYIEGGAGNDTMNGG 433
Query: 586 DRSAAA--------------QHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLS 631
+ + YI G + G +G N A +
Sbjct: 434 NGNNEMYGGDGDDYIYGGDGDDYIYGGNDDDYIEGGNGDDHLYGGNGVNTIYGGAGNDII 493
Query: 632 FDHKKVDLYTDYFGDGNYY 650
+ G+ Y
Sbjct: 494 YSGDHGSFLYGGDGNDRIY 512
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 62/385 (16%), Positives = 102/385 (26%), Gaps = 54/385 (14%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I G+DL+ GG N +I G N TI +
Sbjct: 9 GDDVVYGDAGDDAIIGGEGNDLI----YGGDGNDTIEGNTGNDTIYGGSGNDTITGNEGD 64
Query: 269 ESVVGSSGNDVVIGNSANNVFFE---------SSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + G GND++ G N++ +G+D G G DT++ A IY
Sbjct: 65 DMLYGGDGNDMLDGGEGNDILDGGEGDDSLSGGTGDDTLSGGDGDDTYYINADHGNDTIY 124
Query: 320 RFENAIIVYDANE-HKQDFLSDVER----------------------------LRFADQC 350
E + +E +D+ ++ F +
Sbjct: 125 DSEGRSTLVFGDELSAEDYALRIDIHSGISLVHHETGETISIPDFINMPEYYDFTFDGEA 184
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
R ++E T + + G ++ + + + Y G DD
Sbjct: 185 QIIGGGDSRQVIEGTDEDDVITGGSGFNIIKGGDGNDTITGGDNLNFI-----YGGDGDD 239
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
G G + D I+A A L+ +
Sbjct: 240 TIT-----GGNGINIIRGEGGDDTITDGTGDGYLDGGDGNDTIHAGAGNDILIGGAGNDR 294
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
+ D YL S D + +D G H +G D L
Sbjct: 295 LFGEDGDDVIAGNDGDDYL-SGGDGNDTLYADAGNDELH-GGNGNDSLFGGDGDDTLYGD 352
Query: 531 ASHEDLINAFADAPDLVQAGKDHFS 555
A + L G D F
Sbjct: 353 AGDDYLEAGNGTDTLYGGTGNDIFV 377
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/265 (13%), Positives = 66/265 (24%), Gaps = 9/265 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ D D G G + + G
Sbjct: 476 YGGNGVNTIYGGAGNDIIYSGDHGSFLYGGDGNDRIYAGGGADVLDGGAGNDYLQGDHGG 535
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + N + M M + D + +Q
Sbjct: 536 DTYIFGIGYDIDTINASADLNTIRIHGYTVADMHNTRMANNDLVIDFGEGTGDRLVIQGF 595
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ N ++ E G D I N I
Sbjct: 596 FNFNSNRDFNFVFDDETVLGQYDIQAASAPIIGTD-------ADEWLAIQGNDGG--VIH 646
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N ++ + + + G +GND + GN N++ +GND +G +G DT+ +
Sbjct: 647 AGAGNDGLSGGSGNDELYGEAGNDTLYGNDGNDMLDGGAGNDSLNGGNGEDTYIFAKGYA 706
Query: 315 LYKIYRFENAIIVYDANEHKQDFLS 339
I + + + + D ++
Sbjct: 707 QDTINEWGSDHSIVMLTDINSDEIT 731
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 40/144 (27%), Gaps = 21/144 (14%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + ++++G GND++ G N+ ++GND G SG DT
Sbjct: 8 PGDDVVYGDAGDDAIIGGEGNDLIYGGDGNDTIEGNTGNDTIYGGSGNDTI--------- 58
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
N D L E + L + L G
Sbjct: 59 ----TGNEGDDMLYGGDGNDMLDGGE------GNDILDGGEGDDSLSGGTGDDTLSGGDG 108
Query: 377 QDV--FESMKHFYEFGLSEGRDIT 398
D + SEGR
Sbjct: 109 DDTYYINADHGNDTIYDSEGRSTL 132
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 53/349 (15%), Positives = 87/349 (24%), Gaps = 22/349 (6%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+T I + + + + G G I
Sbjct: 364 TDTLYGGTGNDIFVGGEGINYIYGEDGNDTFYGGNGLNYMYGGDGDDNFTGGELADYIEG 423
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G NG +YG D D Y D ++ G + +
Sbjct: 424 GAGNDTMNGGNGNNEMYGGDGDDYIYGGDGDDYIYGGNDDDYIEGGNGDDHLYGGNGVNT 483
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ G G+ IY GG D+LD G +Y+ +
Sbjct: 484 IYGGAGNDIIYSGD----HGSFLYGGDGNDRIYAGGGADVLD---GGAGNDYLQGDHGGD 536
Query: 251 SSIGGYEKNMTIAQHTVIESVV-------GSSGNDVVIGNSANNVFFESSGN-----DVF 298
+ I G ++ + + + N + N F E +G+ F
Sbjct: 537 TYIFGIGYDIDTINASADLNTIRIHGYTVADMHNTRMANNDLVIDFGEGTGDRLVIQGFF 596
Query: 299 DGSSGLD---TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +S D F Y I II DA+E +D +
Sbjct: 597 NFNSNRDFNFVFDDETVLGQYDIQAASAPIIGTDADEWLAIQGNDGGVIHAGAGNDGLSG 656
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
L A + L G D+ + G D + Y
Sbjct: 657 GSGNDELYGEAGNDTLYGNDGNDMLDGGAGNDSLNGGNGEDTYIFAKGY 705
>gi|126737952|ref|ZP_01753682.1| hypothetical protein RSK20926_19962 [Roseobacter sp. SK209-2-6]
gi|126721345|gb|EBA18049.1| hypothetical protein RSK20926_19962 [Roseobacter sp. SK209-2-6]
Length = 877
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 67/237 (28%), Gaps = 18/237 (7%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L GG N + ++ G N ++ + ++ + G G+D + G S ++ +
Sbjct: 563 DDFLFGGAGNDTLSGSAGHDTLEGGTGNDELSGGSGLDVLSGGVGDDTLSGGSEGDILYG 622
Query: 292 SSGNDVFDGSSGLD-------TFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVER 343
+ GND+ G SG D T S + + + H D D +
Sbjct: 623 NDGNDLLRGGSGQDQLLGGSGTDELNGGSGDDALSGDSGTDFLEGGSGHDTLDGGVDDDT 682
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + + + G D + G D
Sbjct: 683 VIGGSGDDSLTGGYGNDSISAGSGNDTASGGAGADKVLGGAGNDQLSGGLGNDRLNG--- 739
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
GS DL + H + A Y+ + D DA
Sbjct: 740 --GSGADLLAGGDGN-----DHLNGGLGHDLLLGGAGNDRIYLGAGNDSATGGGDAD 789
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/303 (12%), Positives = 68/303 (22%), Gaps = 29/303 (9%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+S G + T+ +++ G G D+ IG S + +G+D G +
Sbjct: 481 TSEGDLTFDDTLVGEAGADTLDGGLGADLAIGGSLGDHLRGGTGDDDLHGGA----APSD 536
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
S + Y N +D L +A ++
Sbjct: 537 RSSEVISFYDESGLRYDQFGNLLAED-------------DDFLFGGAGNDTLSGSAGHDT 583
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L G D G D Y + N + G
Sbjct: 584 LEGGTGNDELSGGSGLDVLSGGVGDDTLSGGSEGDILYGNDGNDLLRGGSGQDQLLGGSG 643
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
E AL + + L V D ++ + +
Sbjct: 644 TDELNGGSGDDALSGDSGTDFLEGGSGHDTLDGGVDDDTVIGGSGDDSLTGGYGNDSISA 703
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+ G+ G + L ++ L G
Sbjct: 704 GSGNDTASGGA------------GADKVLGGAGNDQLSGGLGNDRLNGGSGADLLAGGDG 751
Query: 551 KDH 553
DH
Sbjct: 752 NDH 754
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 67/212 (31%), Gaps = 35/212 (16%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D G G + + L + +G + G +YG D +
Sbjct: 568 GGAGNDTLSGSAGHDTLEGGTGNDELSGGSGLDVLSGGVGDDTLSGGSEGDILYGNDGN- 626
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
++ QD ++ S G + + G +
Sbjct: 627 -------DLLRGGSGQDQLLGGS-------------------GTDELNGG----SGDDAL 656
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ G D LD GGV + + S+ G N +I+ + ++ G
Sbjct: 657 SGDSGTDFLEGGSGHDTLD----GGVDDDTVIGGSGDDSLTGGYGNDSISAGSGNDTASG 712
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+G D V+G + N+ GND +G SG D
Sbjct: 713 GAGADKVLGGAGNDQLSGGLGNDRLNGGSGAD 744
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/305 (15%), Positives = 77/305 (25%), Gaps = 21/305 (6%)
Query: 99 FMEINFDKADVWRYGIGKG-TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
+ AD G+G I H G G V + Y+
Sbjct: 490 DTLVGEAGADTLDGGLGADLAIGGSLGDHLRGGTGDDDLHGGAAPSDRSSEVISFYDESG 549
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY------KIEV 211
+ +D T S + G + +
Sbjct: 550 LRYDQFGNLLAEDDDFLFGGAGNDTLSGSAGHDTLEGGTGNDELSGGSGLDVLSGGVGDD 609
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+Y + G+DLL GG L + G + ++ + + +
Sbjct: 610 TLSGGSEGDILYGNDGNDLL----RGGSGQDQLLGGSGTDELNGGSGDDALSGDSGTDFL 665
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G SG+D + G ++ SG+D G G D+ A S A V
Sbjct: 666 EGGSGHDTLDGGVDDDTVIGGSGDDSLTGGYGNDSI--SAGSGNDTASGGAGADKVLGGA 723
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ Q L +L + L +G D+ L
Sbjct: 724 GNDQ--------LSGGLGNDRLNGGSGADLLAGGDGNDHLNGGLGHDLLLGGAGNDRIYL 775
Query: 392 SEGRD 396
G D
Sbjct: 776 GAGND 780
>gi|330949925|gb|EGH50185.1| putative hemolysin-type calcium-binding region [Pseudomonas syringae
Cit 7]
Length = 1610
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/293 (13%), Positives = 81/293 (27%), Gaps = 12/293 (4%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S +D ++G+S N+V G D G G D + + +
Sbjct: 1227 HIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTV 1286
Query: 330 ANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ +++E L I+ ++++ AS L G D+
Sbjct: 1287 VSSVSWTLGANLENLVLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTGGDGSDS 1346
Query: 389 FGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRGAAARH---YITHGVKEGRNPDAFKAL 443
+ + + R + ++ +G D + + S A + G +
Sbjct: 1347 YYVDDAADRVVETNADAQVGGVDTVYSSLASYTLGANVENIVINSTGAANATGNALDNLI 1406
Query: 444 EYIASHEDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
A + + + L ++L +D
Sbjct: 1407 YAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTSAQQATGGSGLDTLKFTENLIGSQFAD 1466
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
++ T D L A + LI + G DH+
Sbjct: 1467 TLTGNKNANTLS-----GGDGNDTLSGGAGDDVLIGGSGADTLIGGTGADHYV 1514
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 62/474 (13%), Positives = 133/474 (28%), Gaps = 24/474 (5%)
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G +++ A HE L + G + + + S ++ Q +
Sbjct: 386 GTEANDVITGGAAHEQIFGLAGKDTLNGGAGDDILIGGAGADKLTGGASADTFRFDQLTD 445
Query: 173 MDASFGYCATPMVSD--------IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
+ +T +V+D ++ G G G + D
Sbjct: 446 SYRTATTSSTDLVTDFDISQDRIDLSNLGFTGLGSGKGGTLNISYNATLDRTYVKSLDAD 505
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+ G+ +L L G +K+ ++ + + + G T+ + + G++G D + G
Sbjct: 506 ASGN-RFELGLSGNLKDTLNASHFIFQHVVEGTAGGDTLTGTDGNDVINGNAGTDRIDGG 564
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA----IIVYDANEHKQDFLS 339
+ + + D G +G D F Y + Y+ Y I + LS
Sbjct: 565 AGADTITGGADADTLTGGAGADLFIYNSRLDSYRNYTASGTKQSDTITDFNPAEDRIDLS 624
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ D +++ + + T D + G +++ LS F
Sbjct: 625 SIGLRGLGDGSANTIYLSVNADGSKTYIKTDAVDSTGNRFEIALQGNLADKLSASN-FIF 683
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA-- 457
+ L + + + L Y A+ D
Sbjct: 684 STPAAANQAPVLNTPLMDQNITELKAFSYAVQPGSFSDPDSDTLTYSATLADNSALPDWL 743
Query: 458 --DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
D+ L G + G D+ + NV G
Sbjct: 744 KFDSKTLTFSGTPGGTASGLYSVLLTASDATGASVADSFAINVGNVTPGTLTGTEN---A 800
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
+ + + + + L AG+D + +G + + ++
Sbjct: 801 EALYGTEGNDTILGLGGDDTLRGDTGADIINGGAGRD--ALYGGADADTFVYSA 852
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 83/293 (28%), Gaps = 6/293 (2%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G N+ Y + + +D +I + + + ++ G
Sbjct: 327 GNTITGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVNG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I E + G +G D + G + +++ +G D G + DTF + +
Sbjct: 387 TEANDVITGGAAHEQIFGLAGKDTLNGGAGDDILIGGAGADKLTGGASADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + +V D + LS++ ++N+ + L+ T
Sbjct: 447 YRTATTSSTDLVTDFDISQDRIDLSNLGFTGLGSGKGGTLNISYNATLDRTYVKSLDADA 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ I D L G+D G
Sbjct: 507 SGNRFELGLSGNLKDTLNASHFIFQHVVEGTAGGDTLTGTDGNDVIN-----GNAGTDRI 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ A + L + D + N+ + +
Sbjct: 562 DGGAGADTITGGADADTLTGGAGADLFIYNSRLDSYRNYTASGTKQSDTITDF 614
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 82/279 (29%), Gaps = 23/279 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE N + + S + E + + N
Sbjct: 1262 DIYVVDNAFDTVTESNDS-PSQVDTVVSSVSWTLGANLENLVLTGVSAINGTGNAVKNVI 1320
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ + AD+ G G + +A +
Sbjct: 1321 IGNASNNILDGAAGADMLTGGDGSDSYYVDDAA---------------DRVVETNADAQV 1365
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ +S+ SY + + A + + GA G+N+ + +
Sbjct: 1366 GGVDTVYSSLASYTLGANVENIVINSTGAANATGNALDNLIYAGA-----GDNVM--DGR 1418
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ +G L+ + + ++ G + T+ + ++
Sbjct: 1419 DGNDTVSYLFATAGVTVALNTSAQQATGGSGLDTLKFTENLIGSQFADTLTGNKNANTLS 1478
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G GND + G + ++V SG D G +G D + + +
Sbjct: 1479 GGDGNDTLSGGAGDDVLIGGSGADTLIGGTGADHYVFNS 1517
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 38/248 (15%), Positives = 75/248 (30%), Gaps = 8/248 (3%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
S I +G T + K D + I L + A +
Sbjct: 624 SSIGLRGLGDGSANTIYLSVNADGSKTYIKTDAVDSTGNRFEIALQGNLADKLSASNFIF 683
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD-ASFGYCATPMVSDIVAVQKIY 195
+ + SY + S D S + ++D A+
Sbjct: 684 STPAAANQAPVLNTPLMDQNITELKAFSYAVQPGSFSDPDSDTLTYSATLADNSALPDWL 743
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+L + + T D+ G + D I++ + ++ G
Sbjct: 744 KFDSKTLTFSGTPGGTASGLYSVLLTASDATGASVADSFA-------INVGNVTPGTLTG 796
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + ++++G G+D + G++ ++ +G D G + DTF Y A +
Sbjct: 797 TENAEALYGTEGNDTILGLGGDDTLRGDTGADIINGGAGRDALYGGADADTFVYSALTDS 856
Query: 316 YKIYRFEN 323
Y+ Y
Sbjct: 857 YRDYDAGG 864
>gi|329850002|ref|ZP_08264848.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328841913|gb|EGF91483.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 2058
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/398 (15%), Positives = 113/398 (28%), Gaps = 32/398 (8%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLI-------GGVKNYIDLNTESWSSIGGYEKN 259
+ T+ G+D + G + L+ ++S G Y ++
Sbjct: 1577 FGGADYLLGGTGNDTMIGGLGNDTFTVDSSGDVVIEASGQGSDAILSAITYSLYGQYIES 1636
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+++ I + G+ + + GN+ NN+ SG D G +G DT+ A S +
Sbjct: 1637 LSLTGTADI-NATGNGFGNAITGNAGNNLIDGGSGADTMTGGAGNDTYVVGATS--DVVI 1693
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + +E L I + L L G D
Sbjct: 1694 EAASEGTDTVRSSVTWTLGAHLEALILTGTAAIKGYGNALANALTGNDGVNTLYGGAGDD 1753
Query: 379 VFESMK--HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
F EG D+ S + + + N+ + +G+
Sbjct: 1754 TFYVQTVGDAVSEATGEGNDLVVASVNFSLAGSQIENLTLTGSALNGTG---NGLANTLT 1810
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD-DL 495
+A L + D + A V EG S + S + +
Sbjct: 1811 GNAGNNLLDGGTGVDSLIGGAGDDTYVVNTTGDVVTEIAAEGSDTVLSSATFTLSNEVEH 1870
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ G+ A G G + + L + VQ D+
Sbjct: 1871 LTLTGTGNTKA------TGNALGNILTGN------SGNNTLTGLGGNDTYYVQNTADNVV 1918
Query: 556 NFGYEEGRSITFNPDLY--LTSYDDLWNVFGSDRSAAA 591
EG I F+ Y Y + + G D A
Sbjct: 1919 EA-SGEGTDIIFSTVSYSLTGRYVETLTLTGMDNINAT 1955
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 59/367 (16%), Positives = 112/367 (30%), Gaps = 56/367 (15%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E S+ ++ NG+ ++ + AD G G T +
Sbjct: 1635 ESLSLTGTADINATGNGFGNAITGNAGNNLIDGGSGADTMTGGAGNDTYVVG-------- 1686
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+D + + S + + G ++ A
Sbjct: 1687 ----------------------ATSDVVIEAASEGTDTVRSSVTWTLGAHLEALILTGTA 1724
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYI 243
K YG + + + T+Y GDD ++ G N +
Sbjct: 1725 AIKGYGNALANA----------LTGNDGVNTLYGGAGDDTFYVQTVGDAVSEATGEGNDL 1774
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + ++S G +N+T+ + + G+ + + GN+ NN+ +G D G +G
Sbjct: 1775 VVASVNFSLAGSQIENLTLTGSAL--NGTGNGLANTLTGNAGNNLLDGGTGVDSLIGGAG 1832
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
DT+ + E + V + ++VE L + +IL
Sbjct: 1833 DDTYVVNTTGDVVTEIAAEGSDTVLSSATF--TLSNEVEHLTLTGTGNTKATGNALGNIL 1890
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEF--GLSEGRDITFDSYLY--LGSYDDLRNVFGSD 418
+ L + G D + EG DI F + Y G Y + + G D
Sbjct: 1891 TGNSGNNTLTGLGGNDTYYVQNTADNVVEASGEGTDIIFSTVSYSLTGRYVETLTLTGMD 1950
Query: 419 RGAAARH 425
A +
Sbjct: 1951 NINATGN 1957
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 69/494 (13%), Positives = 134/494 (27%), Gaps = 30/494 (6%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
V T AD + RD + ++ R ++ + + + E + V
Sbjct: 1467 VATGSVDADGVTRDPSETRLVNLTVSELAPGERYTYAFDGRSQAIDHI--LSDEELAAVA 1524
Query: 67 DLTFEETSIHSDIKFISSNNGYVCT------PRYDSRYFMEINFDKADVWRYGIGKGTIL 120
D + + ++N + + + AD+ G +L
Sbjct: 1525 DYDVVHLNTGYSGRTGATNPAISDHDPTLARFDFRNFSEVLTGTTGADLLEGFGGADYLL 1584
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
+ LG N + V + S S S+
Sbjct: 1585 GGTGNDTMIGGLG-------NDTFTVDSSGDVVIEASGQGSDAILSAITYSLYGQYIESL 1637
Query: 181 ATPMVSDIVAVQKIYG-APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ +DI A +G A G+ GNN+ T+ G+D +
Sbjct: 1638 SLTGTADINATGNGFGNAITGNAGNNL------IDGGSGADTMTGGAGNDTYVV--GATS 1689
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVF 298
I+ +E ++ +T +E+++ + GN+ N + G +
Sbjct: 1690 DVVIEAASEGTDTVRSS---VTWTLGAHLEALILTGTAAIKGYGNALANALTGNDGVNTL 1746
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G +G DTF+ E +V + S +E L ++
Sbjct: 1747 YGGAGDDTFYVQTVGDAVSEATGEGNDLVVASVNFSL-AGSQIENLTLTGSALNGTGNGL 1805
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ L A L G D + ++ D+ + F
Sbjct: 1806 ANTLTGNAGNNLLDGGTGVDSLIGGAGDDTYVVNTTGDVVTEIAAEGSDTVLSSATFTLS 1865
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
G + L + + L + VQ D+ EG
Sbjct: 1866 NEVEHLTLTGTGNTKATGNALGNILTGNSGNNTLTGLGGNDTYYVQNTADNVVEASG-EG 1924
Query: 479 RFVTFDSYLYLGSY 492
+ F + Y +
Sbjct: 1925 TDIIFSTVSYSLTG 1938
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 47/394 (11%), Positives = 95/394 (24%), Gaps = 52/394 (13%)
Query: 3 NIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDIT-ELNPNAQEVARWALGE 61
N T ++L+ ++ + + D+ E + R ++
Sbjct: 1650 NGFGNAITGNAGNNLIDGGSGADTMTGGAGNDTYVVGATSDVVIEAASEGTDTVRSSVTW 1709
Query: 62 WSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+ E + N + D + +
Sbjct: 1710 ---TLGAHLEALILTGTAAIKGYGNALANALTGNDGVNTLYGGAGDDTFYVQTVGDAVSE 1766
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
+ + + LT ++ G
Sbjct: 1767 AT-----------GEGNDLVVASVNFSLAGSQIENLTLTG--------SALNGTGNGLAN 1807
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
T G+ GNN+ + ++ GDD + G
Sbjct: 1808 TL---------------TGNAGNNL------LDGGTGVDSLIGGAGDDTY-VVNTTGDVV 1845
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDG 300
S + + ++ +E + +GN GN+ N+ +SGN+ G
Sbjct: 1846 TEIAAEGSDTVLSSATFTLS----NEVEHLTLTGTGNTKATGNALGNILTGNSGNNTLTG 1901
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQR 359
G DT++ + E I++ + VE L I++ Q
Sbjct: 1902 LGGNDTYYVQNTADNVVEASGEGTDIIFSTVSYSL-TGRYVETLTLTGMDNINATGNGQV 1960
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ L L G D+ F
Sbjct: 1961 NTLVGNDGNNTLNGGGGADILTGGLGSDLFLFGL 1994
>gi|149721274|ref|XP_001487888.1| PREDICTED: matrix metallopeptidase 16 (membrane-inserted) [Equus
caballus]
Length = 607
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 59/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSD 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|78189655|ref|YP_379993.1| hypothetical protein Cag_1699 [Chlorobium chlorochromatii CaD3]
gi|78171854|gb|ABB28950.1| hypothetical protein Cag_1699 [Chlorobium chlorochromatii CaD3]
Length = 593
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
I E N + T + + G GND + G +++ SG+DV DG SG+D
Sbjct: 478 GNGDGMVILADEGNQEMWGGTGDDLLWGGVGNDNLYGGIDDDLLCGGSGDDVLDGGSGID 537
Query: 306 TFFYYAPSYLYKIYR--FENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSVN 355
++ S Y+I + V D A D L ++E+LRFAD+ + +
Sbjct: 538 AAYFSGKSEEYRITHHPTTSMTTVVDLVAERDGTDNLFNIEQLRFADRTMFLGD 591
>gi|85703248|ref|ZP_01034352.1| type I secretion target repeat protein [Roseovarius sp. 217]
gi|85672176|gb|EAQ27033.1| type I secretion target repeat protein [Roseovarius sp. 217]
Length = 805
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 59/220 (26%), Gaps = 34/220 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-----------SSIGGYE 257
+ +I G+D +D DL + + G +
Sbjct: 307 GDDSLIGGDGADSILGGAGNDTIDSGSPVSTGPLPDLGFGTIVPADPDPENDRDFVSGGD 366
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ I +++ G +G DV+ G ++ GND G G DT +
Sbjct: 367 GDDVILTGDDADTITGGTGADVIDGGIDADLIDGDEGNDTLIGGEGSDTI--NGGAGDDV 424
Query: 318 IYRF--------------------ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
IY ++ + + F D + F D ++
Sbjct: 425 IYGGLDPSFPDEFNIPDATDPEPDNGRDLIDGGDGNDTIFGQDDDDTIFGGAGDDVIDGG 484
Query: 358 QR-SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
++ A + L G D +G D
Sbjct: 485 IDNDSIDGGAGADVLTGGQGDDTVTGGTGNDTLSGGDGAD 524
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/340 (12%), Positives = 83/340 (24%), Gaps = 36/340 (10%)
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ + I + T + D G G +IL
Sbjct: 268 GINVTDVYFGLPGSVIDTGLPGDDTLIGGDGDDTLLGEIGDDSLIGGDGADSILGGAGND 327
Query: 127 EIGHA------------LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
I G + P + V +D LT + + + D
Sbjct: 328 TIDSGSPVSTGPLPDLGFGTIVPADPDPENDRDFVSGGDGDDVILTGDDADTITGGTGAD 387
Query: 175 ASFGYCATPMVSDIVAVQKIYGAP-----KGSLGNNIYKIE--------------VQQKD 215
G ++ + G G G+++ +
Sbjct: 388 VIDGGIDADLIDGDEGNDTLIGGEGSDTINGGAGDDVIYGGLDPSFPDEFNIPDATDPEP 447
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
I G+D + G + I G N +I + + G
Sbjct: 448 DNGRDLIDGGDGNDTI----FGQDDDDTIFGGAGDDVIDGGIDNDSIDGGAGADVLTGGQ 503
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D V G + N+ G D G D F A + ++ ++
Sbjct: 504 GDDTVTGGTGNDTLSGGDGADSLSGGDDRD-VFLAAGAGDVIDGGTGDSTDDGVNDDFDT 562
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
L + R Q +D+ + + + + +
Sbjct: 563 LDLRGLGRFDIVGQTVDADGDSTSGTVNFLGTDGAVTGSL 602
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/316 (12%), Positives = 78/316 (24%), Gaps = 61/316 (19%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G ++ ++++G G+D ++G ++ G D G +G DT
Sbjct: 273 DVYFGLPGSVIDTGLPGDDTLIGGDGDDTLLGEIGDDSLIGGDGADSILGGAGNDTIDSG 332
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+P + IV + + D + + D + + +
Sbjct: 333 SPVSTGPLPDLGFGTIVPADPDPENDR----DFVSGGDGDDVILTGDDADTITGGTGADV 388
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ I D+ + + EG D Y
Sbjct: 389 IDGGIDADLIDGDEGNDTLIGGEGSDTINGGAGDDVIY---------------------- 426
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
G +F I D G D D ++ G
Sbjct: 427 ---GGLDPSFPDEFNIPDATDPEPDNGRDLIDGGDGNDTIFGQ--------DDDDTIFGG 475
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+ DD+ + +++ A + L D G
Sbjct: 476 AGDDVIDGGI----------------------DNDSIDGGAGADVLTGGQGDDTVTGGTG 513
Query: 551 KDHFSNFGYEEGRSIT 566
D + G + S++
Sbjct: 514 ND--TLSGGDGADSLS 527
Score = 37.8 bits (86), Expect = 5.2, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 1/88 (1%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
++ +N ID+ + + N + + V G G+D ++ + ++
Sbjct: 2 AINRIDGDNTENRIDIAYTADPEGDRIDANDA-PDGSNDDVVDGLGGDDTILAGAGDDTV 60
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYK 317
F SG+D +G +G D P
Sbjct: 61 FAGSGSDSVEGGAGNDLLVGDTPDPAAG 88
>gi|83949834|ref|ZP_00958567.1| type I secretion target repeat protein [Roseovarius nubinhibens
ISM]
gi|83837733|gb|EAP77029.1| type I secretion target repeat protein [Roseovarius nubinhibens
ISM]
Length = 404
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 16/188 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + ++ G+D + S+ G N I+ T +
Sbjct: 162 NDRVEAGNGNDIVWGGSGNDTIY-------------GQGGADSLMGGTGNDYISGGTSND 208
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G +G D + GNS N+ F + NDV +G G D + S + +
Sbjct: 209 TIRGETGADRLYGNSGNDRIFGGANNDVLNGGGGDDRLY--GGSGADHMKGGTGRDHLDG 266
Query: 330 ANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
++ + + + + L + +L + L G DV
Sbjct: 267 SSGNDSLYGNAGNDTLIGGSGRDVLNGGGENDVLRGGNDRDLLHGSTGNDVLTGGAAEDR 326
Query: 389 FGLSEGRD 396
F +G D
Sbjct: 327 FVFRDGWD 334
Score = 42.9 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 53/183 (28%), Gaps = 11/183 (6%)
Query: 328 YDANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+D ++ + +R+ + + + L+ G D
Sbjct: 146 TIDGGDGRDLIAAGLNNDRVEAGNGNDIVWGGSGNDTIYGQGGADSLMGGTGNDYISGGT 205
Query: 385 HFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
G D + + ++ G+ +D+ N G D Y G +
Sbjct: 206 SNDTIRGETGADRLYGNSGNDRIFGGANNDVLNGGGGDDRL----YGGSGADHMKGGTGR 261
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
L+ + ++ L + + G+D + G + D L GS + G
Sbjct: 262 DHLDGSSGNDSLYGNAGNDTLIGGSGRDVLNGGGENDVLRGGNDRDLLHGSTGNDVLTGG 321
Query: 501 SDR 503
+
Sbjct: 322 AAE 324
>gi|254425468|ref|ZP_05039185.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196187891|gb|EDX82856.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 880
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/303 (14%), Positives = 79/303 (26%), Gaps = 8/303 (2%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ G+D+LD +L GG N I + ++ G N T+
Sbjct: 513 GNDFLFGGINNDVLAGGRGNDILDGGRDKDSLDGGDGNDILFGGDGKDTLTGGRGNDTLN 572
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++ G G D + G + N++ + ND DG G DT +
Sbjct: 573 GGRGDDTLDGGRGQDALFGGNGNDILIGGADNDTLDGGDGNDTL--KGGRGNDTLDGRIG 630
Query: 324 AIIVYDANEHKQDFLSDVER-LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
++ +N + F L + +L + L G D +
Sbjct: 631 QDALFGSNGNDILFGRGGNDTLDGGNGNDTLDGGDSNDLLNGGKGSDTLDGGNGNDTLDG 690
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ G D+ N G D
Sbjct: 691 GRGQDALFGGSGDDVLVGGADSDTLDGGNGNDTLDGGDGNDTLDGGRGRNALFGGDGNDT 750
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
L ++ L + G D + + +G ++ G+
Sbjct: 751 LFGGVDNDTLNGGDGNDTLDGGRGSDILTGGNGRDVLLGGDGDDTLIGEGNNDTLTGGNG 810
Query: 503 RGA 505
R
Sbjct: 811 RDT 813
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 55/446 (12%), Positives = 96/446 (21%), Gaps = 16/446 (3%)
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
+ G+ ++G LG + + + + +S
Sbjct: 354 TLNSSMLDGSNGFVINDIDVGDRLGDSVSSAGDINSDGFDDLIIGARRADPNGDVSGESY 413
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
D FG + D + G + I +
Sbjct: 414 LVFGSDVGFGATLELSMLDESSGLIFEGIDAFDNSGSSVSGAGDVNGDGIDDLIIGASNK 473
Query: 229 DLLDL-TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+ T ++ G K + + G NDV+ G N+
Sbjct: 474 SYVVFGAADIKPPTRTLFGTNGNDTLVGGRKGDIFFGLAGNDFLFGGINNDVLAGGRGND 533
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRF 346
+ D DG G D F + + + D + L
Sbjct: 534 ILDGGRDKDSLDGGDGNDILF--GGDGKDTLTGGRGNDTLNGGRGDDTLDGGRGQDALFG 591
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ + L+ + L G D + S G DI F G
Sbjct: 592 GNGNDILIGGADNDTLDGGDGNDTLKGGRGNDTLDGRIGQDALFGSNGNDILFG----RG 647
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
D L G+D L+ ++ L G
Sbjct: 648 GNDTLDGGNGNDTLD-----GGDSNDLLNGGKGSDTLDGGNGNDTLDGGRGQDALFGGSG 702
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
D + + G + G R A + G
Sbjct: 703 DDVLVGGADSDTLDGGNGNDTLDGGDGNDTLDGGRGRNAL---FGGDGNDTLFGGVDNDT 759
Query: 527 LEYIASHEDLINAFADAPDLVQAGKD 552
L ++ L G+D
Sbjct: 760 LNGGDGNDTLDGGRGSDILTGGNGRD 785
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 73/239 (30%), Gaps = 10/239 (4%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ + I D G G T+ + +G NG ++G +
Sbjct: 591 GGNGNDILIGGADNDTLDGGDGNDTLKGGRGNDTLDGRIGQDALFGSNGNDILFGRGGND 650
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS--LGNNIYKI-- 209
D + + +++ G + + G G+++
Sbjct: 651 TLDGGNGNDTLDGGDSNDLLNGGKGSDTLDGGNGNDTLDGGRGQDALFGGSGDDVLVGGA 710
Query: 210 -EVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
T+ G+D LD L GG N ++ G + N T+
Sbjct: 711 DSDTLDGGNGNDTLDGGDGNDTLDGGRGRNALFGGDGNDTLFGGVDNDTLNGGDGNDTLD 770
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G +G DV++G ++ ND G +G DTF + I F+
Sbjct: 771 GGRGSDILTGGNGRDVLLGGDGDDTLIGEGNNDTLTGGNGRDTFVLSVGDGVDTITDFD 829
>gi|157278088|ref|NP_001098144.1| stromelysin-3 [Oryzias latipes]
gi|19071862|dbj|BAB85675.1| stromelysin-3 [Oryzias latipes]
Length = 492
Score = 76.7 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 60/190 (31%), Gaps = 45/190 (23%)
Query: 52 QEVARWALGEWSKVVDLTFEETSIH-SDIKFISSNN---------------GYVCTPRYD 95
+++ R A G WS+V L F E + +DI + + PR
Sbjct: 145 RDIFREAFGVWSEVTPLRFREVTDGKADITIDFNRYWHGDNLPFDGPGGILAHAFFPRTH 204
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
E++FD + W G GT L A HE GH LGL H + +
Sbjct: 205 RE--GEVHFDFDEHWTVGNSVGTDLLQVAAHEFGHVLGLQHSQDPDAVMCPF-------- 254
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
S Y D +Q +YG P ++ +
Sbjct: 255 -------------------YSDSYPLQLSDDDKRGIQHLYGPPVHRPPEVTETNDISSEL 295
Query: 216 SPFIQTIYDS 225
+T +D+
Sbjct: 296 PDACRTNFDA 305
>gi|255068479|ref|ZP_05320334.1| putative type 1 secretion protein [Neisseria sicca ATCC 29256]
gi|255047280|gb|EET42744.1| putative type 1 secretion protein [Neisseria sicca ATCC 29256]
Length = 860
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 56/203 (27%), Gaps = 9/203 (4%)
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
HP + +N + + + + + G + I +
Sbjct: 557 DHPEKVTSITRQELSNIPDQNYYYANETAGFKSVNVTYITGTAGSDSIKGTDGIDHIDGK 616
Query: 195 YGAPKGSLGNN-----IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
G GN + + G D ++ G N +
Sbjct: 617 SGDDSIYAGNGNDTVFVSGGTNFISGGDGNDIVRGGDGRDTVN----GDSGNDVIFGNGG 672
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G N T+ + G SG DV+ G S +++ F +D+ G +G DT+ +
Sbjct: 673 DDHLNGGAGNDTLFGGENNDVFYGESGKDVLYGGSGDDLLFGGLDDDILYGGAGNDTYVF 732
Query: 310 YAPSYLYKIYRFENAIIVYDANE 332
I +
Sbjct: 733 CFGEGHDTISDNHGNNALQFGQG 755
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 16/161 (9%), Positives = 30/161 (18%)
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
YY + I A ++ + + +
Sbjct: 578 YYYANETAGFKSVNVTYITGTAGSDSIKGTDGIDHIDGKSGDDSIYAGNGNDTVFVSGGT 637
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ G D+ G D+ F + N Y
Sbjct: 638 NFISGGDGNDIVRGGDGRDTVNGDSGNDVIFGNGGDDHLNGGAGNDTLFGGENNDVFYGE 697
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
G L + L + + G+ H
Sbjct: 698 SGKDVLYGGSGDDLLFGGLDDDILYGGAGNDTYVFCFGEGH 738
>gi|261363640|ref|ZP_05976523.1| putative type I secretion target GGXGXDXXX repeat-containing domain
protein [Neisseria mucosa ATCC 25996]
gi|288568173|gb|EFC89733.1| putative type I secretion target GGXGXDXXX repeat-containing domain
protein [Neisseria mucosa ATCC 25996]
Length = 656
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 57/332 (17%), Positives = 95/332 (28%), Gaps = 17/332 (5%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D +LIG N ++ G E N + + + G G+D++ G++ N++
Sbjct: 228 DNSLIGNSGNNRLSGGRGSDTLYGMEGNDLLMGGDDRDELYGGQGDDILRGDAGNDLLDG 287
Query: 292 SSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
GND DG SG DT Y+ + + N I + + VE L
Sbjct: 288 GYGNDTLDGGSGADTMAGGLGNDVYHVDNVNDTVIEETNGGIDTIYSSVTYTAPTHVENL 347
Query: 345 RFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+IL + L G D + +G D +
Sbjct: 348 TLTGNDNTFAFGNNADNILTGNSGNNRLSGGRGSDTLYGNEGNDLLMGGDGNDHLYGGNG 407
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
D + + + EG + I ++ + +
Sbjct: 408 ADTMRGD--DGHDNYYVDNINDKVIERWGEGVDTIYSSVSYTIPTYVEHLTLTGSNNTFG 465
Query: 464 QVGKDH---FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
D N G + + LY S DDL + + Y G
Sbjct: 466 IGNYDDNTITGNSGHNQLNGDGGNDTLYGMSGDDLLSGGSGNDYL----YGGDGDDRLNG 521
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D L ++ L + AGKD
Sbjct: 522 GDGIDYLHGGDGNDYLTGGSGSDTIVTGAGKD 553
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 43/320 (13%), Positives = 83/320 (25%), Gaps = 6/320 (1%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G N + L+ + G + + + + + G SGND + G+ ++ + +G
Sbjct: 106 YGKGGNDLMLSGNGNDYLWGDDGDDRLDGLGGNDVLNGGSGNDFLSGHDGEDILYGGTGM 165
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV- 354
D G G DTF+ + +A + + VE+L +
Sbjct: 166 DTMLGGKGNDTFYVDNVK--DTVVEDADAGYDTIYSSVTYTLPNHVEKLILEGKDNIFGF 223
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ L + L G D M+ + RD + D N
Sbjct: 224 GNNADNSLIGNSGNNRLSGGRGSDTLYGMEGNDLLMGGDDRDELYGGQGDDILRGDAGND 283
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
G ++ +I D + + +
Sbjct: 284 LLDGGYGNDTLDGGSGADTMAGGLGNDVYHVDNVNDTVIEETNGGIDTIYSSVTYTAPTH 343
Query: 475 CEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
E D+ G+ D S + G + L ++
Sbjct: 344 VENLTLTGNDNTFAFGNNADNILTGNSGNNRLS---GGRGSDTLYGNEGNDLLMGGDGND 400
Query: 535 DLINAFADAPDLVQAGKDHF 554
L G D++
Sbjct: 401 HLYGGNGADTMRGDDGHDNY 420
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/244 (14%), Positives = 67/244 (27%), Gaps = 42/244 (17%)
Query: 225 SGGDDLLDLTLIGGVKNYID---LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+GG D + ++ +++ L + G + + ++ + G G+D +
Sbjct: 326 NGGIDTIYSSVTYTAPTHVENLTLTGNDNTFAFGNNADNILTGNSGNNRLSGGRGSDTLY 385
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHK 334
GN N++ GND G +G DT YY + K+ + +
Sbjct: 386 GNEGNDLLMGGDGNDHLYGGNGADTMRGDDGHDNYYVDNINDKVIERWGEGVDTIYSSVS 445
Query: 335 QDFLSDVERLRFAD----------------------------QCIDSVNVKQRSILEYTA 366
+ VE L + +L +
Sbjct: 446 YTIPTYVEHLTLTGSNNTFGIGNYDDNTITGNSGHNQLNGDGGNDTLYGMSGDDLLSGGS 505
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L G D +G D D + G D A +
Sbjct: 506 GNDYLYGGDGDDRLNGGDGIDYLHGGDGNDYLTGGSG----SDTIVTGAGKDTVAFSTSD 561
Query: 427 ITHG 430
I +G
Sbjct: 562 IRYG 565
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 47/159 (29%), Gaps = 6/159 (3%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D T+ G + ++ G + ++ + + + G G+D + G +
Sbjct: 471 DNTITGNSGHNQLNGDGGNDTLYGMSGDDLLSGGSGNDYLYGGDGDDRLNGGDGIDYLHG 530
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE------NAIIVYDANEHKQDFLSDVERLR 345
GND G SG DT A + + I ++ K D L
Sbjct: 531 GDGNDYLTGGSGSDTIVTGAGKDTVAFSTSDIRYGSIDRITDFNPYMDKLDLSGMRSLLS 590
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++ + + ++ Y L+
Sbjct: 591 GSEANVSWSELFVKNPYYYDTGRSYLVFDSVSQTLAYRA 629
Score = 39.4 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 39/332 (11%), Positives = 72/332 (21%), Gaps = 37/332 (11%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF--FESSGND 296
+ L I G ++N T+ T G GND +A + E+ G D
Sbjct: 2 ADTLLSLKNNQSVVITGTDRNDTLYGSTGHTIFYGGLGNDTYYSKNAGDTIIERENEGRD 61
Query: 297 VFDGSS--------------GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ S+ G + + + +
Sbjct: 62 LIYSSTDFTLPEHVEDLELQGNSMLGIGNDADNVIWGNSNGNRLYGKGGNDLMLSGNGND 121
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
L D + +L + + L G+D+ +G D +
Sbjct: 122 YLWGDDGDDRLDGLGGNDVLNGGSGNDFLSGHDGEDILYGGTGMDTMLGGKGNDTFYVDN 181
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
+ +D + + + H K + LI +
Sbjct: 182 VKDTVVEDADAGYDTIYSSVTYTLPNHVEKLILEGKDNIFGFGNNADNSLIGNSGNNRLS 241
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
G D + D Y G R
Sbjct: 242 GGRGSDTLYGMEGNDLLMGGDD---------------------RDELYGGQGDDILRGDA 280
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
L+ ++ L G D +
Sbjct: 281 GNDLLDGGYGNDTLDGGSGADTMAGGLGNDVY 312
>gi|330889632|gb|EGH22293.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
mori str. 301020]
Length = 1610
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/325 (12%), Positives = 85/325 (26%), Gaps = 12/325 (3%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL +S + + ++ G+S +D ++G++ N+V G D G G
Sbjct: 1201 DLGFRGDASDNNDPAAIFESGQNEGGNIFGTSDDDTLVGSAGNDVLDGDQGADNMTGGDG 1260
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L I+ ++++
Sbjct: 1261 NDIYVVDNALDTVTESNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVI 1320
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRG 420
AS L G D+ + + + R + ++ +G D + + S
Sbjct: 1321 TGNASNNVLDGAAGADLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTL 1380
Query: 421 AAARH---YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH-FSNFGCE 476
A G + A + +
Sbjct: 1381 GANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTS 1440
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ L ++L +D ++ L A + L
Sbjct: 1441 AQQATGGSGLDTLKGTENLTGSQFADTLTGNKNANV-----LNGGSGNDTLSGGAGDDVL 1495
Query: 537 INAFADAPDLVQAGKDHFSNFGYEE 561
I + G D + E
Sbjct: 1496 IGGSGADTLIGGTGADRYVFNNSNE 1520
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 81/287 (28%), Gaps = 14/287 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTL-------IGGVKNYIDLNTESWSSIGGYEKNMT 261
+ G+D+ + + +D S S G
Sbjct: 1242 GNDVLDGDQGADNMTGGDGNDIYVVDNALDTVTESNDSPSQVDTVVSSVSWQLGANVENL 1301
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + G++ +V+ GN++NNV ++G D+ G G D+++ +
Sbjct: 1302 LLTGVSAINGTGNALKNVITGNASNNVLDGAAGADLLTGGDGSDSYYVDDAADRVVETNA 1361
Query: 322 E---NAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ I ++ +++E + ++ +++ A + G
Sbjct: 1362 DQQVGGIDTVLSSLASYTLGANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDGN 1421
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D + F G++ + + D L+ A + N
Sbjct: 1422 DTVSYL--FATAGVTVALNTSAQQATGGSGLDTLKGTENLTGSQFADTLTGNKNANVLNG 1479
Query: 438 DAF-KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ L A + LI + G D + E
Sbjct: 1480 GSGNDTLSGGAGDDVLIGGSGADTLIGGTGADRYVFNNSNETGLGGL 1526
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/293 (15%), Positives = 89/293 (30%), Gaps = 14/293 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E ++G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMILGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ +V D + LS++ ++N+ + L+ T
Sbjct: 447 YRTATTSATDLVTDFDVSQDRIDLSNLGFSGLGSGKGGTLNISYNATLDRTYVKSLDADA 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ I D L G+D + G
Sbjct: 507 SGNRFELGLSGNLKDTLNASHFIFQRVIEGTAGGDTLTGTDGNDVMN-----GSAGTDRI 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ A + L + D + N+ + +
Sbjct: 562 NGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNYNASGTKQSDTITDF 614
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 5/149 (3%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ D + S + K + + SG +L
Sbjct: 716 PGSFSDPDSNTLTYSATLADNSALPDWLKFDSKTLTFSGTPGGTASGLYSVLLTASDATG 775
Query: 240 KNY-----IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ I + + + G E + ++++G G+D + G++ ++ +G
Sbjct: 776 ASVADSFAITVGNVTPGVLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIINGGAG 835
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
D G G DTF Y A + Y+ Y
Sbjct: 836 RDALYGGDGADTFVYSALTDSYRDYDAGG 864
>gi|320327023|gb|EFW83037.1| Poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3)
[Pseudomonas syringae pv. glycinea str. race 4]
Length = 1610
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 53/408 (12%), Positives = 112/408 (27%), Gaps = 25/408 (6%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL +S + + ++ G+S +D ++G++ N+V G D G G
Sbjct: 1201 DLGFRGDASDNNDPAAIFESGQNEGGNIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDG 1260
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L I+S ++++
Sbjct: 1261 NDIYVVDNALDTVTESNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINSTGNALKNVI 1320
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
AS L G D+ + + + + + D + ++
Sbjct: 1321 TGNASNNVLDGAAGADLLTGGDGSDSYY------VDDAADRVVETNADQQVGGIDTVLSS 1374
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHED-LINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
Y E A + D LI A A + + ++
Sbjct: 1375 LASYTLGANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVT 1434
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF---KALEYIASHEDLIN 538
+ + GS G + L + ++ L
Sbjct: 1435 ------VALNTSAQQATGGSGLDTLKGTENLTGSQFADTLTGNKNANVLNGGSGNDTLSG 1488
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
D + +G D + G FN + + AA +
Sbjct: 1489 GVGDDVLIGGSGAD--TLIGGTGADRYVFNNSN--ETGLGGLRDIINGFKAAEGDKLDFT 1544
Query: 599 MKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ R+L + F + N + + + +L LY + +
Sbjct: 1545 GFDARSLTDAHDAFVFIGNAAFSANNTGELRF----ADGVLYGNLDDN 1588
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 16/288 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI--------GGYEKNM 260
+ G+D+ + + + ++ G +N+
Sbjct: 1242 GNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTVVSSVSWQLGANVENL 1301
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + I + G++ +V+ GN++NNV ++G D+ G G D+++ +
Sbjct: 1302 LLTGVSAI-NSTGNALKNVITGNASNNVLDGAAGADLLTGGDGSDSYYVDDAADRVVETN 1360
Query: 321 FE---NAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ I ++ +++E + ++ +++ A + G
Sbjct: 1361 ADQQVGGIDTVLSSLASYTLGANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDG 1420
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + F G++ + + D L+ A + N
Sbjct: 1421 NDTVSYL--FATAGVTVALNTSAQQATGGSGLDTLKGTENLTGSQFADTLTGNKNANVLN 1478
Query: 437 PDAF-KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ L + LI + G D + E
Sbjct: 1479 GGSGNDTLSGGVGDDVLIGGSGADTLIGGTGADRYVFNNSNETGLGGL 1526
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/293 (15%), Positives = 87/293 (29%), Gaps = 14/293 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E + G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMIFGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ +V D + LS++ ++N+ + L+ T
Sbjct: 447 YRTATTSATDLVTDFDVSQDRIDLSNLGFSGLGSGKGGTLNISYNATLDRTYVKSLDADA 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ I D L G+D G
Sbjct: 507 SGNRFELGLSGNLKDTLNASHFIFQRVIEGTAGGDTLTGTDGNDVMN-----GNAGTDRI 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ A + L + D + N+ + +
Sbjct: 562 NGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNYTASGTKQSDTITDF 614
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 32/72 (44%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G E + ++++G G+D + G++ ++ +G D G G DTF Y A
Sbjct: 793 VLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIINGGAGRDALYGGDGADTFVYSA 852
Query: 312 PSYLYKIYRFEN 323
+ Y+ Y
Sbjct: 853 LTDSYRDYDAGG 864
>gi|284051005|ref|ZP_06381215.1| FG-GAP [Arthrospira platensis str. Paraca]
Length = 693
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 49/182 (26%), Gaps = 24/182 (13%)
Query: 213 QKDSPFIQTIYDSGGDDL-----LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + + G+D D TL GG N L ++ G + T+
Sbjct: 275 TINFRPVTAMQGRDGNDTLIGDQFDQTLDGGPGNDSILGGSGNDTLLGGPGDDTLFGQGG 334
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + SGN+++ G N+ GND G G D + + + +
Sbjct: 335 NDRLQAGSGNNLLYGGVGNDTLLGGVGNDSLFGGLGDD------------LLQAGSGDNI 382
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D L + + L L G + +
Sbjct: 383 LDGGAGNDTLLGGI-------GNNSLFGGEGNDCLSGGGGNNWLEGGAGVNTLTAGTGND 435
Query: 388 EF 389
Sbjct: 436 TL 437
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 58/167 (34%), Gaps = 15/167 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
P T++ GG+D L + L GGV N L S+ G + +
Sbjct: 315 SGNDTLLGGPGDDTLFGQGGNDRLQAGSGNNLLYGGVGNDTLLGGVGNDSLFGGLGDDLL 374
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G +GND ++G NN F GND G G + + + + +
Sbjct: 375 QAGSGDNILDGGAGNDTLLGGIGNNSLFGGEGNDCLSGGGGNN--WLEGGAGVNTLTAGT 432
Query: 323 NAIIVYDANEHKQDF--------LSDVERLRFADQCIDSVNVKQRSI 361
+ + + + + +RL F Q +D ++
Sbjct: 433 GNDTLVYLSPNDRGTQPDRILNFTPNSDRLVFQSQSLDQGGFGLSAL 479
Score = 44.8 bits (104), Expect = 0.043, Method: Composition-based stats.
Identities = 20/181 (11%), Positives = 42/181 (23%), Gaps = 1/181 (0%)
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAI-IVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ G G++ + + + A V ++ D +
Sbjct: 236 ILPGGVGVEFIPDTTSLGGFGSFDYTLRDRHNQFATATATINFRPVTAMQGRDGNDTLIG 295
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ L+ + ++ G D G D Y + N
Sbjct: 296 DQFDQTLDGGPGNDSILGGSGNDTLLGGPGDDTLFGQGGNDRLQAGSGNNLLYGGVGNDT 355
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ G + L+ A ++ L+ + G D S G
Sbjct: 356 LLGGVGNDSLFGGLGDDLLQAGSGDNILDGGAGNDTLLGGIGNNSLFGGEGNDCLSGGGG 415
Query: 476 E 476
Sbjct: 416 N 416
Score = 39.0 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 54/263 (20%), Gaps = 28/263 (10%)
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
+G D L G+D G L ++
Sbjct: 286 GRDGNDTLIGDQFD----QTLDGGPGNDSIL-----GGSGNDTLLGGPGDDTLFGQGGND 336
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
L + VG D + F L D G+
Sbjct: 337 RLQAGSGNNLLYGGVGNDTLLGGVGNDSLFGGLGDDLLQAGSGDNILDGGAGNDTLL--- 393
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS-----NFGYEEGRSI 565
G + L + L G D + G + R +
Sbjct: 394 GGIGNNSLFGGEGNDCLSGGGGNNWLEGGAGVNTLTAGTGNDTLVYLSPNDRGTQPDRIL 453
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDK 625
F P+ + G +A ++ QF + D
Sbjct: 454 NFTPNSDRLVFQSQSLDQGGFGLSALNSDTQ---------TLNPQQFTTNRESL--PEDT 502
Query: 626 ADLSLSFDHKKVDLYTDYFGDGN 648
L +D L D G G
Sbjct: 503 EIPILLYDTTTGLLEYDIDGLGT 525
>gi|194037087|ref|XP_001926652.1| PREDICTED: matrix metalloproteinase-16 [Sus scrofa]
Length = 607
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 59/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|254476763|ref|ZP_05090149.1| hypothetical protein RR11_2601 [Ruegeria sp. R11]
gi|214031006|gb|EEB71841.1| hypothetical protein RR11_2601 [Ruegeria sp. R11]
Length = 1330
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 61/191 (31%), Gaps = 7/191 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + ++ G+D + GG N + L + G++ N T+ +
Sbjct: 1083 GNDTIRGNAGEDELFLGSGND----SGFGGDGNDLVLAGPGQDLVRGHQGNDTLHGGSNA 1138
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G GND V N+ + + +D G G DT + + I + V+
Sbjct: 1139 DTIFGGRGNDSVFAGKGNDNVYGRADDDHLRGGWGDDTI--HGGTGSDTILAGQGHDTVF 1196
Query: 329 DA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ +++ K L + L G D
Sbjct: 1197 GGEGSDRVRAGWGDDKVFLGLADDHVFGGKGNDTLIGGMGRDTLNGGAGNDRLRGGADSD 1256
Query: 388 EFGLSEGRDIT 398
F ++GR +
Sbjct: 1257 TFIFAKGRGMD 1267
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 53/177 (29%), Gaps = 3/177 (1%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+ G + + GG T +I G + I +S++G GND +
Sbjct: 1028 SPGGGGSTPQAPVDVTGGSDGETFDGTNLNDTINGDGGDDLIRGGLGQDSLMGGIGNDTI 1087
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GN+ + F SGND G G D A + + ++ + F
Sbjct: 1088 RGNAGEDELFLGSGNDSGFGGDGNDLVL--AGPGQDLVRGHQGNDTLHGGSNADTIFGGR 1145
Query: 341 VERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
FA + L + + G D + + EG D
Sbjct: 1146 GNDSVFAGKGNDNVYGRADDDHLRGGWGDDTIHGGTGSDTILAGQGHDTVFGGEGSD 1202
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 65/260 (25%), Gaps = 29/260 (11%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + SD + T D + D GIG TI + E+
Sbjct: 1040 VDVTGGSDGE-TFDGTNLNDTINGDGGDDLIRGGLGQDSLMGGIGNDTIRGNAGEDELFL 1098
Query: 131 ALGLMHPGSYNGGYPVY-GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
G +G V G D + D++
Sbjct: 1099 GSGNDSGFGGDGNDLVLAGPGQDLVRGHQGNDTLHGGSNADTIFGGRGNDSVFAG----- 1153
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
K + GDD + GG + L +
Sbjct: 1154 ------------------KGNDNVYGRADDDHLRGGWGDDTI----HGGTGSDTILAGQG 1191
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G E + + + V +D V G N+ G D +G +G D
Sbjct: 1192 HDTVFGGEGSDRVRAGWGDDKVFLGLADDHVFGGKGNDTLIGGMGRDTLNGGAGNDRLRG 1251
Query: 310 YAPSYLYKIYRFENAIIVYD 329
A S + + + D
Sbjct: 1252 GADSDTFIFAKGRGMDTIAD 1271
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 31/255 (12%), Positives = 50/255 (19%), Gaps = 16/255 (6%)
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
SD E + ++ + L+ IG D
Sbjct: 1030 GGGGSTPQAPVDVTGGSDGETFDGTNLNDTINGDGGDDLIRGGLGQDSLMGGIGNDTIRG 1089
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
E L G D F D + G D G
Sbjct: 1090 NAGEDELFLGSGNDSGFGGDG----NDLVLAGPGQDLVR-----GHQGNDTLHGGSNADT 1140
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ ++ + + + DH ++ S L G
Sbjct: 1141 IFGGRGNDSVFAGKGNDNVYGRADDDHLRGGWGDDTIHGGTGSDTILAGQGHDTVFGGEG 1200
Query: 503 RGAAARHYITHGVKEGRNPD------AFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
+ V G D L + L + A D F
Sbjct: 1201 SDRVRAGWGDDKVFLGLADDHVFGGKGNDTLIGGMGRDTLNGGAGNDRLRGGADSDTFIF 1260
Query: 557 FGYEEGRSI-TFNPD 570
+I F+
Sbjct: 1261 AKGRGMDTIADFDAT 1275
>gi|301767356|ref|XP_002919098.1| PREDICTED: matrix metalloproteinase-16-like [Ailuropoda
melanoleuca]
Length = 607
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 59/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|329848648|ref|ZP_08263676.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843711|gb|EGF93280.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1081
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 70/516 (13%), Positives = 129/516 (25%), Gaps = 21/516 (4%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
S D + N + + +D D G I N +
Sbjct: 529 NISFGQDGDDLIYGNFQIDQLDGGAGNDTMYGYDGGDSINGIDGNDAIYGGNGNDTLNGG 588
Query: 132 LGLM--HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
LG G N Y V + + + + S+ + ++I
Sbjct: 589 LGTDTLVGGLDNDTYSVDNTGDVVTEANGQGTDTIFSTVTYSLSGRYIEFLTLTGAANIN 648
Query: 190 A-----VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
A Q + G + + + + T+ GDD ++ +
Sbjct: 649 ATGNSLAQTLTGNTGNNTLTGLGGNDRLDGGAGGADTLIGGAGDDTYVIS--TTGDTVTE 706
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
E W + +T + +E + S N GN NNV ++GN+ G G
Sbjct: 707 TIGEGWDLVESA---ITYTLGSEVERLTLTGSANINGTGNGLNNVLTGNAGNNTLAGGLG 763
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT++ + V+ + +E L D +D+ + L
Sbjct: 764 DDTYYVQNAADHVSESSNSGTDSVFSTVTYSL-AGKQIENLTLTDAAVDATGNGLANTLV 822
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
A+ L G D G D + + + +
Sbjct: 823 GNANANTLDGGAGHDSLNGSAGADTMIGGTGNDSYAVDDVGDVVTEAASSGGDVVNASVT 882
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE----EGR 479
A A + L + +G D + E
Sbjct: 883 CTLSAEVESLVLTGTAAINGTGNAGNNTLTGNSGNNVLSGGLGNDTYYVQNTGDNVVEAG 942
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP---DAFKALEYIASHEDL 536
D +Y + + G D L + L
Sbjct: 943 GAGTDLIYSTVTYTLAGRFAETLTLTGTANINATGNSNSNTLIGNDGNNTLNGKGGPDKL 1002
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLY 572
L +AG + + + ++ T N + Y
Sbjct: 1003 TGGLGADIFLFEAGSAKDTIYDFSAAQNDTINVNAY 1038
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/386 (14%), Positives = 91/386 (23%), Gaps = 45/386 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA-QHT 266
+ ++ +T+ G DLLD T I+L T + N A
Sbjct: 395 GNDTVLANNGANETLDGGAGTDLLDTTSW-DDGYSINLATGVTNYSPESFINFENAIMGD 453
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++V G+SG + + G + + GND G +G DT +++
Sbjct: 454 GNDTVTGTSGANDIDGGAGEDTLLGEDGNDTLHGGAGQDTL--SGGGGNDELFGDSGNSS 511
Query: 327 VYDANEHKQDFLS--------------------DVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + S +++L +
Sbjct: 512 ILGGSGNDTIHASTDWFNISFGQDGDDLIYGNFQIDQLDGGAGNDTMYGYDGGDSINGID 571
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + G D D S G N G+D + Y
Sbjct: 572 GNDAIYGGNGNDTLNGGLGTDTLVGGLDNDTY--SVDNTGDVVTEANGQGTDTIFSTVTY 629
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--- 483
G A + + + G G T
Sbjct: 630 SLSGRYIEFLTLTGAANINATGNSLAQTLTGNTGNNTLTGLGGNDRLDGGAGGADTLIGG 689
Query: 484 --DSYLYLGSYDDLRNVF---GSDRGAAARHYITHGVKEGRNPDA-----------FKAL 527
D + + D G D +A Y E L
Sbjct: 690 AGDDTYVISTTGDTVTETIGEGWDLVESAITYTLGSEVERLTLTGSANINGTGNGLNNVL 749
Query: 528 EYIASHEDLINAFADAPDLVQAGKDH 553
A + L D VQ DH
Sbjct: 750 TGNAGNNTLAGGLGDDTYYVQNAADH 775
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 69/513 (13%), Positives = 132/513 (25%), Gaps = 42/513 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+D + T + + + G G I +N H G
Sbjct: 100 TGNDGNDTLAGGNGNDTLTGGAGDDSFDDIGGVNSISGGDGDDYITYNNLTHNGSTFDGG 159
Query: 135 MHPGSYNGG------YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
++N ++ T + + D G A M++ +
Sbjct: 160 DGVDTFNAYLLVSTKTINLADGTYADDYGTETLISIENVIGAPQTDVITGSDAANMLNGL 219
Query: 189 VAVQKIY--GAPKGSLGNNIYKI-----------------EVQQKDSPFIQTIYDSGGDD 229
+Y G G + Y + +Q + S + T G D
Sbjct: 220 GGEDSLYGGGGNDTIYGGDNYDVIYGGDGVNELYGEGGDDYIQTQTSFYGSTYDGGDGSD 279
Query: 230 LLDLT-LIGGVKNYIDLNTESWSSIGGYE---KNMTIAQHTVIESVVGSSGNDVVIGNSA 285
+LD + + G IDL +++ G E + E+++G++G + + GN+
Sbjct: 280 MLDYSWIFGDYGIVIDLTVGTYTDGFGSETLLNFERVLGTQGSETLIGTTGANQIYGNAG 339
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N+ G D +G G DT V ++ + L
Sbjct: 340 NDSIVGFGGADTLNGGEGNDTVTALTDFDGEDSVDGGEGDDVITSSGYGT-------FLG 392
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
N L+ A + L D + S I F++ +
Sbjct: 393 GDGNDTVLANNGANETLDGGAGTDLLDTTSWDDGYSINLATGVTNYSPESFINFENAIMG 452
Query: 406 GSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
D + G++ G L +++L ++
Sbjct: 453 DGNDTVTGTSGANDIDGGAGEDTLLGEDGNDTLHGGAGQDTLSGGGGNDELFGDSGNSSI 512
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
L G D D + + + G Y G
Sbjct: 513 LGGSGNDTIHASTDWFNISFGQDGDDLIYGNFQIDQLDGGAGNDTM--YGYDGGDSINGI 570
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
D A+ ++ L + D +
Sbjct: 571 DGNDAIYGGNGNDTLNGGLGTDTLVGGLDNDTY 603
Score = 47.1 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 56/194 (28%), Gaps = 35/194 (18%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L + N+ + + + G+ G++ + GN N+ +GND G +G
Sbjct: 64 LGANVENLTLSGSGNIDGTGNELGNVITGNDGDNSLTGNDGNDTLAGGNGNDTLTGGAGD 123
Query: 305 DTF-----------------------------------FYYAPSYLYKIYRFENAIIVYD 329
D+F +YL + N
Sbjct: 124 DSFDDIGGVNSISGGDGDDYITYNNLTHNGSTFDGGDGVDTFNAYLLVSTKTINLADGTY 183
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
A+++ + L +E + A Q ++L + L G D ++
Sbjct: 184 ADDYGTETLISIENVIGAPQTDVITGSDAANMLNGLGGEDSLYGGGGNDTIYGGDNYDVI 243
Query: 390 GLSEGRDITFDSYL 403
+G + +
Sbjct: 244 YGGDGVNELYGEGG 257
Score = 42.9 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 52/175 (29%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ GNN + D + G + + ++ G
Sbjct: 903 TGNAGNNTLTGNSGNNVLSGGLGNDTYYVQNTGDNVVEAGGAGTDLIYSTVTYTLAGRFA 962
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
T + G+S ++ +IGN NN G D G G D F + A S I
Sbjct: 963 ETLTLTGTANINATGNSNSNTLIGNDGNNTLNGKGGPDKLTGGLGADIFLFEAGSAKDTI 1022
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
Y F A +++ + + +I AS D++
Sbjct: 1023 YDFSAAQNDTINVNAYTGGVANNSLVAQVGGNVVITFDASNTITVIGASQADVLA 1077
>gi|1209010|dbj|BAA12023.1| metalloproteinase [Homo sapiens]
gi|119612058|gb|EAW91652.1| matrix metallopeptidase 16 (membrane-inserted), isoform CRA_b [Homo
sapiens]
Length = 457
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 59/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|326929890|ref|XP_003211086.1| PREDICTED: stromelysin-3-like [Meleagris gallopavo]
Length = 453
Score = 76.4 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 60/204 (29%), Gaps = 52/204 (25%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + YK + + + AL WS V LTF E
Sbjct: 67 LSGGRWDKTDLTYKIIRFPWQLVKTKV-------RRTIEEALKVWSDVTPLTFTEVQEGR 119
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G GT L
Sbjct: 120 ADIVIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGNNLGTDLL 177
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H + S+MS F Y
Sbjct: 178 QVAAHEFGHVLGLQHT-------------------TVSKSLMS--------PFYIFRYPL 210
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNN 205
+ D +Q +YG PK
Sbjct: 211 SLSEDDKQGIQYLYGKPKLDPDPT 234
>gi|332238258|ref|XP_003268322.1| PREDICTED: matrix metalloproteinase-16 [Nomascus leucogenys]
Length = 607
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 59/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|144900306|emb|CAM77170.1| Hemolysin-type calcium-binding region [Magnetospirillum
gryphiswaldense MSR-1]
Length = 3109
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 78/587 (13%), Positives = 145/587 (24%), Gaps = 73/587 (12%)
Query: 34 VLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPR 93
+ ++ T + ++ L + FE SD NG T
Sbjct: 1485 DVNNVAGTYTGTVVTSAGTDLTEGILHFVGSAFNDWFE----GSDGNETFQGNGGRDTIH 1540
Query: 94 YDSRYFMEINFDKAD-----VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV-- 146
+ + FD + G + + I H +G + NGG
Sbjct: 1541 GNDGWDTITFFDTENHGVTVNLNGSSGNDGFGDSDDISGIEHVIGSKYGDELNGGDGNER 1600
Query: 147 -------------------------------YGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
G D ++ ++V + D
Sbjct: 1601 LDGRDGDDTITGGGGVDTIVGGAGQDSLTGGSGSDIFIVENASQSTVAATDTVTDFGTGQ 1660
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL 235
+ GA + + V F D +
Sbjct: 1661 DQVWFTGAAGYAYSTAINASGADDLAAAIALVTAGVANNTIAFFTWGGDGYLYVKGTGSG 1720
Query: 236 IGGVKNYI-----------DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
I + I D N S+ + +S+ GND + G
Sbjct: 1721 ISFDQTLIRLQGVSAAPSRDGNDAFVSTATATMGADEMYGTAGADSISSLGGNDTIYGLG 1780
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++ +G+D+ G G D +Y S + +E D L+ +E +
Sbjct: 1781 GDDTLHGGAGDDLLHGGDGSDVIYYTDSSLSVAVNLGMGTAS---GDESGFDTLTSIEAV 1837
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
+ + L+ ++L G D+F I+
Sbjct: 1838 VGSQGADTIIGSSANETLDGYHGADELTGGGGADLF---------------VISHPVQSN 1882
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
L S D FG+ E + +AS E L+ + A +
Sbjct: 1883 LASGYDHIMDFGTGNDTILLKGGAGYTLETVAATGVTLEQAVASVEALMTPDSIAYFEWE 1942
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
G + + + G+ AA + + G D
Sbjct: 1943 GGAYLYVSGTGSGSVDFGGTLVQIPVQAGAVTLSGGNTILAATGASVVADILVG--SDGV 2000
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
++ +A +D+ AG D F +G + +
Sbjct: 2001 DVIDALAGDDDITGGAGADILTGGAGDDTFLYASASDGGDVITDFTA 2047
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 66/474 (13%), Positives = 121/474 (25%), Gaps = 24/474 (5%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
++ D + G G + + ALG G+
Sbjct: 1341 FGTNKNATVETLTGGGGHDQFFGGGGLDSFVGDGFDTVHYGALG-------GFNAGTGGL 1393
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ D+ + ++ + +D + AP G +
Sbjct: 1394 VMNAALDAAGNGAATLNDGLGGSWTQTYQGIGEIVGTDGADQLYGWTAPVGDRKFTLNGG 1453
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
TI D + GG ID+N + + G + I
Sbjct: 1454 RGSDHLIGGAGTIADYSDE---YRVSEGGAGIRIDVNNVAGTYTGTVVTSAGTDLTEGIL 1510
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
VGS+ ND G+ N F + G D G+ G DT ++ + +
Sbjct: 1511 HFVGSAFNDWFEGSDGNETFQGNGGRDTIHGNDGWDTITFFDTENHGVTVNLNGSSG--N 1568
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D +S +E + + + L+ + + G D
Sbjct: 1569 DGFGDSDDISGIEHVIGSKYGDELNGGDGNERLDGRDGDDTITGGGGVDTIVGGAGQDSL 1628
Query: 390 GLSEGRDITF--DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G DI ++ + D FG+ + G +A A + A
Sbjct: 1629 TGGSGSDIFIVENASQSTVAATDTVTDFGTGQDQVW-FTGAAGYAYSTAINASGADDLAA 1687
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG---------SYDDLRNV 498
+ + A+ + G ++FD L +D
Sbjct: 1688 AIALVTAGVANNTIAFFTWGGDGYLYVKGTGSGISFDQTLIRLQGVSAAPSRDGNDAFVS 1747
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ A Y T G + + + + L D G D
Sbjct: 1748 TATATMGADEMYGTAGADSISSLGGNDTIYGLGGDDTLHGGAGDDLLHGGDGSD 1801
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 48/344 (13%), Positives = 92/344 (26%), Gaps = 33/344 (9%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
+ + I +D TI + I + G
Sbjct: 2466 ATGAFDLSAIEFVDWGNDDTLTVIGSVGSDTITGTSHDETISGGVGVDSIDISGGGADTI 2525
Query: 139 SYNGGYPVYG------VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM---VSDIV 189
+ G V +DSF+ + + +D + +T + + D +
Sbjct: 2526 LFTSSSLSVGELGRDTVTGFAADDSFILDHRIFALGSSGTLDPTRFAISTALTGNLGDDI 2585
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A + GA GS G +I+ S T L T +
Sbjct: 2586 AGIVVVGAASGSDGVDIWFTTKLSDVSEGNSTRIG------------TLAGVNTSLITAA 2633
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ N + + GS+G D++ + ++V + G D G G D+
Sbjct: 2634 HFALADLTSN---TPSVGADVINGSAGTDIIDALAGDDVINGNGGQDTLRGGGGNDSITL 2690
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDF----LSDVERLRFADQCIDSVNVKQRSILEYT 365
+ ++ + +S +E FA +
Sbjct: 2691 TGLVTGTTVAGGLGTDMLTIVASGAVNLQDVGISGIETFDFAHAGVGEEITSVSIGANIL 2750
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
A+ + G G D+T D+ +Y D
Sbjct: 2751 ANNFSAVWSEGNSYVG-----LSNTSGTGLDLTIDAGVYSDLAD 2789
Score = 38.2 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 72/281 (25%), Gaps = 30/281 (10%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
S+ G T D+ G G I ++ + LG+ G
Sbjct: 1768 SSLGGNDTIYGLGGDDTLHGGAGDDLLHGGDGSDVIYYTDSSLSVAVNLGMGTASGDESG 1827
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ +++ + +D+ + + S
Sbjct: 1828 FDTLTSIEAVVGSQGADTIIGSSANETLDGYHGADELTGGGGADLFVISHPVQSNLASGY 1887
Query: 204 NNIYKIEVQQ-------KDSPFIQTIYDSGGD--------------DLLDLTLIGGVKNY 242
++I ++T+ +G D + G
Sbjct: 1888 DHIMDFGTGNDTILLKGGAGYTLETVAATGVTLEQAVASVEALMTPDSIAYFEWEGGAYL 1947
Query: 243 IDLNTESWSSIGGYE--------KNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESS 293
T S S G +T++ I + G+S D+++G+ +V +
Sbjct: 1948 YVSGTGSGSVDFGGTLVQIPVQAGAVTLSGGNTILAATGASVVADILVGSDGVDVIDALA 2007
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D G +G D A + + V
Sbjct: 2008 GDDDITGGAGADILTGGAGDDTFLYASASDGGDVITDFTAG 2048
>gi|254295497|ref|YP_003061519.1| glycosyl transferase family 2 [Hirschia baltica ATCC 49814]
gi|254044028|gb|ACT60822.1| glycosyl transferase family 2 [Hirschia baltica ATCC 49814]
Length = 1327
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 18/128 (14%)
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLI 537
R FDS Y D + HYI+ G + G P+ F + Y ++ DL
Sbjct: 493 RSGLFDSTYYREQLPDHQKS----EMDLIGHYISSGDQSGLKPNKFFDPVFYRQTYHDLR 548
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYI 595
DL +H+ + G EGR+ + F+ Y ++D+ + +H++
Sbjct: 549 -------DLPITTLEHYISNGSHEGRATSSEFDSGFYRKLHEDIAAI----GIDPLKHFL 597
Query: 596 THGMKEGR 603
+G EGR
Sbjct: 598 QNGQFEGR 605
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 18/128 (14%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLI 453
R FDS Y D HYI+ G + G P+ F + Y ++ DL
Sbjct: 493 RSGLFDSTYYREQLPD----HQKSEMDLIGHYISSGDQSGLKPNKFFDPVFYRQTYHDL- 547
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
DL +H+ + G EGR + FDS Y ++D G D +H++
Sbjct: 548 ------RDLPITTLEHYISNGSHEGRATSSEFDSGFYRKLHED-IAAIGIDP---LKHFL 597
Query: 512 THGVKEGR 519
+G EGR
Sbjct: 598 QNGQFEGR 605
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 16/99 (16%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
R F + Y D DL+ H+ + G + G F+P Y +Y
Sbjct: 492 RRSGLFDSTYYREQLPD---HQKSEMDLIG----HYISSGDQSGLKPNKFFDPVFYRQTY 544
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSV 615
DL ++ + +HYI++G EGRA + +F S
Sbjct: 545 HDLRDLPITT----LEHYISNGSHEGRA---TSSEFDSG 576
Score = 42.5 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 10/80 (12%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
+ Y +Y DL + +++H+ G EGR + FDS Y ++D+ +
Sbjct: 534 FFDPVFYRQTYHDLRDL----PITTLEHYISNGSHEGRATSSEFDSGFYRKLHEDIAAI- 588
Query: 416 GSDRGAAARHYITHGVKEGR 435
+H++ +G EGR
Sbjct: 589 ---GIDPLKHFLQNGQFEGR 605
>gi|66046318|ref|YP_236159.1| hemolysin-type calcium-binding region:haemolysin-type calcium binding
related [Pseudomonas syringae pv. syringae B728a]
gi|63257025|gb|AAY38121.1| Hemolysin-type calcium-binding region:Haemolysin-type calcium binding
related [Pseudomonas syringae pv. syringae B728a]
Length = 2689
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 71/555 (12%), Positives = 134/555 (24%), Gaps = 85/555 (15%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH------PGSY 140
G T S D + + G G + I +H PG+
Sbjct: 550 GGADTLTGGSGNDQLEGGAGIDTYSFFKGDGLDHIIDGDGLIKINEAAVHGGKQVGPGAN 609
Query: 141 NGGYPVYGV--DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
V E + M Y ++D +SD + + G
Sbjct: 610 TWLSETGDVRFSLSDEGGDRKSLSMFYGDGDRIVIDNFVMGTFGITLSDYIEPDRSLGNL 669
Query: 199 KGSLGN-----------NIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKN 241
G+ +I + + + D ++ L D L G +
Sbjct: 670 NTIEGDLKPEDQDVTEADIQVGLDDWGNEIVMPGVADPDRENRLFDTPGNDNLLGLGGDD 729
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF----------- 290
+ + G + T+ +++VG G D++I + ++ +
Sbjct: 730 ELTSRQGGDDRLDGGSGDDTLTGGVGDDTLVGGVGADILISSDGDDELYAEVETTLDDFI 789
Query: 291 ----------------ESSGNDVFD---------GSSGLDTFFYYAPSYLYKIYRFENAI 325
G+D+ G G DT + + E
Sbjct: 790 MSTSPKNGANFQDWLDAGKGDDLLIGSSSRDMLLGGEGADTL--AGGNGDDFLGGDEIGG 847
Query: 326 IVYDANEHKQDFLSDVERL--RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
I D ++ L F D + ++ A + L G D
Sbjct: 848 IPNADWSFTTDLQTNGLMLLKTFKAGLNDDIEDGGDDVMYGGAGNDMLWGSFGNDYLSGD 907
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS--------DRGAAARHYITHGVKEGR 435
++G D F D R+ G+ D G I + +
Sbjct: 908 SGNDILDGNDGNDTLFGGTGDDFLAGDSRDASGNLGKGADYLDGGDGNDQLIGSALNDVL 967
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
+ + N G D+ + + G +
Sbjct: 968 IGGDGNDTLWGDNFFGADNLPGQDFLDGGDGSDYLMGGQDNDTLYGGTGEDFLFGDDPSV 1027
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL--------INAFADAPDLV 547
+ Y G E + +L + ++ L + D
Sbjct: 1028 PKAQQGNDLL----YGGEGNDEIQGMGGNDSLYGGSENDTLLGDGRDVAAESHGDDLIFG 1083
Query: 548 QAGKDHFSNFGYEEG 562
+AG D G +
Sbjct: 1084 EAGNDSLWGGGGSDS 1098
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 74/555 (13%), Positives = 131/555 (23%), Gaps = 81/555 (14%)
Query: 76 HSDIKFISSNNG-YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE------- 127
D + S N G I DV G G T+ N
Sbjct: 932 AGDSRDASGNLGKGADYLDGGDGNDQLIGSALNDVLIGGDGNDTLWGDNFFGADNLPGQD 991
Query: 128 -IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
+ G + +YG + SV D + M
Sbjct: 992 FLDGGDGSDYLMGGQDNDTLYGGTGEDFLFGDDPSVPKAQQGNDLLYGGEGNDEIQGMGG 1051
Query: 187 DIVAVQKIYGA--PKGSLGNNIYK-----IEVQQKDSPFIQTIYDSGGDDLLDLTLIGG- 238
+ +YG LG+ + +++ GG D L
Sbjct: 1052 NDS----LYGGSENDTLLGDGRDVAAESHGDDLIFGEAGNDSLWGGGGSDSLYGGEGADF 1107
Query: 239 -VKNYIDLNT--ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
++ L T E + G T+ +++ G + NDV+ G +NV GN
Sbjct: 1108 LEGDFPGLTTLYEGNDYLDGGNGEDTLQGAGGDDTLFGGNDNDVLFGGMGDNVLEGGQGN 1167
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL----------------- 338
D S+G D + + + I ++ + D L
Sbjct: 1168 DFISASTGNDVYLFNSGDGADTIEDSGGNNKIFFGGKFSVDSLEVRISTPSLGQQYLHVG 1227
Query: 339 --------------SDVERLRFADQCIDS-----------------------VNVKQRSI 361
F D S +
Sbjct: 1228 DSLGSYILLANMPAWSTSSFSFVDGATLSYAELIKLSENSLKYTGFEKSELVYGTMLADV 1287
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEF--GLSEGRDITFDSYLYLGSYDDLRNVF-GSD 418
+ + L G D+ + + + ++G DI DS S + ++
Sbjct: 1288 INGEGGDDSLNGQGGDDLLDGGEGADTYIVNANDGDDIISDSVWVPASTVTPPTIEQTTN 1347
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
AA + V+ G+ L A L + +
Sbjct: 1348 AVAADSDISGNVVRFGQGITRDNVLFKEALTFSLQKVLLVEYPGGSLTILGGFESVIAKY 1407
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
F + + + A T + D + ++ ++
Sbjct: 1408 SFADGSVLTHADVMKIVSSTPAVSSNGADTITGTDADDQLDGKDGADLIYGGLGNDSIVG 1467
Query: 539 AFADAPDLVQAGKDH 553
D G DH
Sbjct: 1468 GQGDDTLYGGQGDDH 1482
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 83/266 (31%), Gaps = 11/266 (4%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ I+ ++ S I G + I ++++G G+D + G + N++ GND
Sbjct: 2337 DSRINDLPDTDSVINGSDVRDDIFGFNGSDTLLGRGGDDRLSGGNGNDLLSGGLGNDRLI 2396
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G G D + + I + L + + + N
Sbjct: 2397 GGRGDDVYVFAKGDGQDVIDNAGGGKDIL--------RLVGINGADISGGLVKDANNLII 2448
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFG--LSEGRDITFDSYLYLGSYDDLRNVFGS 417
++ ++ L G D ++ G S + ++ G D+
Sbjct: 2449 NVH-GSSDSITLENWFGGDGNVIENIIFDDGAVSSAAIASAYGIDIFSGEVPDVYAELPE 2507
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+R + R + +E + ++ L + D + G D + N +
Sbjct: 2508 ERDYSNIVLAKQSNTYMRGTQSSDFIEGASGNDVLDGSGGDDYLIGGRGNDMYLNIFAGD 2567
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDR 503
++Y S D + +D
Sbjct: 2568 TGKDIINNYSGTPSDSDSLMLGVADV 2593
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 52/385 (13%), Positives = 110/385 (28%), Gaps = 35/385 (9%)
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
YN D+ Y+ + ++ Y + S + ++ GA
Sbjct: 395 YNFNGFALKNDSFYQGMQGIDTLNDYNQATGTGNITSAWVSDRALYLSLLLKAGAEGADT 454
Query: 200 G---------------SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
GN Y + ++ S DD L +G +
Sbjct: 455 ALGSPLITLSKHTFLFEEGNTTYNTLYVNEGIDRQSILFGSQADDNL----LGSLARDHL 510
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ G + + + + + G +D +IG + SGND +G +G+
Sbjct: 511 YGESGNDYLYGGDGDDLLEGGEGNDHLNGGRDDDRLIGMGGADTLTGGSGNDQLEGGAGI 570
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHK--------QDFLSDVERLRFADQCIDSVNV 356
DT+ ++ L I + I + +A H +LS+ +RF+ + +
Sbjct: 571 DTYSFFKGDGLDHIIDGDGLIKINEAAVHGGKQVGPGANTWLSETGDVRFSL-SDEGGDR 629
Query: 357 KQRSILEYTASY----EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
K S+ ++ G + + ++ G + + D++
Sbjct: 630 KSLSMFYGDGDRIVIDNFVMGTFGITLSDYIEPDRSLGNLNTIEGDLKPEDQDVTEADIQ 689
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED---LINAFADAPDLVQVGKDH 469
+ +E R D + D D G D
Sbjct: 690 VGLDDWGNEIVMPGVADPDRENRLFDTPGNDNLLGLGGDDELTSRQGGDDRLDGGSGDDT 749
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDD 494
+ ++ + + + S D
Sbjct: 750 LTGGVGDDTLVGGVGADILISSDGD 774
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/259 (13%), Positives = 79/259 (30%), Gaps = 18/259 (6%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ D+ G G T + + + + + P S +
Sbjct: 1285 ADVINGEGGDDSLNGQGGDDLLDGGEGADTYIVNANDGDDIISDSVWVPASTVTPPTIEQ 1344
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
N DS ++ + F + + F T + ++ V+ G+ G
Sbjct: 1345 TTNAVAADSDISGNVVRFGQGITRDNVLFKEALTFSLQKVLLVEYPGGSLTILGG----- 1399
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLI---GGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
E F + D + ++ T++ + G + I
Sbjct: 1400 FESVIAKYSFADGSVLTHADVMKIVSSTPAVSSNGADTITGTDADDQLDGKDGADLIYGG 1459
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSG---------NDVFDGSSGLDTFFYYAPSYLY 316
+S+VG G+D + G ++ + G NDV +G +G +TF++
Sbjct: 1460 LGNDSIVGGQGDDTLYGGQGDDHLYGGDGDDRLDGGSGNDVLEGGAGDNTFYFSRGMEND 1519
Query: 317 KI-YRFENAIIVYDANEHK 334
+ + +++K
Sbjct: 1520 TFIADGASNNTLIFGSDYK 1538
>gi|170752013|ref|YP_001758273.1| hypothetical protein Mrad2831_5645 [Methylobacterium radiotolerans
JCM 2831]
gi|170658535|gb|ACB27590.1| hypothetical protein Mrad2831_5645 [Methylobacterium radiotolerans
JCM 2831]
Length = 227
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 13/85 (15%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F Y+ + D+ A P HF N G+ EGR + F+ YL + D+
Sbjct: 22 GFDPAYYLDRNPDVRRA-GLDPL------QHFLNHGWTEGRDPSAGFSTAGYLAANPDVA 74
Query: 581 NVFGSDRSAAAQHYITHGMKEGRAL 605
H++ +G+ EGR+
Sbjct: 75 AA----GQNPLIHFLQNGLAEGRSG 95
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 12/87 (13%)
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLI 537
FD YL D+R +H++ HG EGR+P F Y+A++ D+
Sbjct: 19 PLPGFDPAYYLDRNPDVRRAGLD----PLQHFLNHGWTEGRDPSAGFSTAGYLAANPDVA 74
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRS 564
A P + HF G EGRS
Sbjct: 75 AA-GQNPLI------HFLQNGLAEGRS 94
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 38/114 (33%), Gaps = 12/114 (10%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 455
FD YL D+R +H++ HG EGR+P F Y+A++ D+ A
Sbjct: 21 PGFDPAYYLDRNPDVRRA----GLDPLQHFLNHGWTEGRDPSAGFSTAGYLAANPDVAAA 76
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ HF G EGR + G+ H
Sbjct: 77 GQNP-------LIHFLQNGLAEGRSGYTPGAPPTQVGQKGTSQAQGAPGSPESH 123
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 39/120 (32%), Gaps = 13/120 (10%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
Y D+ + G D +HF G +EGRD + F + YL + D+
Sbjct: 22 GFDPAYYLDRNPDVRRA-GLDPL---QHFLNHGWTEGRDPSAGFSTAGYLAANPDVAAA- 76
Query: 416 GSDRGAAARHYITHGVKEGRN---PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
H++ +G+ EGR+ P A A V F +
Sbjct: 77 ---GQNPLIHFLQNGLAEGRSGYTPGAPPTQVGQKGTSQAQGAPGSPESHDHVPLQGFID 133
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 20/62 (32%), Gaps = 6/62 (9%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
F+P YL D+ QH++ HG EGR S + +
Sbjct: 21 PGFDPAYYLDRNPDVRRA----GLDPLQHFLNHGWTEGRD--PSAGFSTAGYLAANPDVA 74
Query: 625 KA 626
A
Sbjct: 75 AA 76
>gi|149910991|ref|ZP_01899621.1| calcium binding hemolysin protein, putative [Moritella sp. PE36]
gi|149805974|gb|EDM65959.1| calcium binding hemolysin protein, putative [Moritella sp. PE36]
Length = 1615
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 67/481 (13%), Positives = 119/481 (24%), Gaps = 49/481 (10%)
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
T + A+ +R+ G G ++ H + G G +
Sbjct: 693 ATNTLQGGKGNDRLEGSAGAETYRFNRGDGQDAINDFDHNARSSSGWGKVDRIVLGDGIT 752
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
+ D ++ DS + T I AV G+ +Y
Sbjct: 753 KDELSLRRD--GNHMVILIGGPDSGDSITIENAYTDGRYRIEAVVLADGSTFAPQDIPLY 810
Query: 208 K--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + F + I G+D I + G N I
Sbjct: 811 VSIGDNIIQGGEFAEVIATGEGND-------------IIHAEGGDDILDGGTGNDEINAG 857
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + + G GND V S ++V G+D+ G G D+ L + N
Sbjct: 858 SGNDVIDGGEGNDEVNAGSGDDVIDGGLGDDLLHGDDGNDSLQGGEGDDLLTVSGRGNNT 917
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ D L + Q + N L G D E
Sbjct: 918 LD---GGVGDDTLKVNRSADYYYQRDVARNAT-----------NTLQGGKGNDRLEGSAG 963
Query: 386 FYEFGLSEG------RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK------- 432
+ + G D ++ G R V G G
Sbjct: 964 AETYRFNRGDGQDAINDFDHNARSSSGWGKVDRIVLGDGITKDELSLRRDGNHMVILIGG 1023
Query: 433 -EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+ + + + AD + + G + F + G
Sbjct: 1024 PDSGDSITIENAYADGRYRIEAVVLADGSTFAPQDIPLYVSIGDNIIQGGEFAEVIATGE 1083
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
+D+ + G D G E ++ ++++ D G
Sbjct: 1084 GNDIIHAEGGDDILD----GGTGNDEINAGSGNDVIDGGEGNDEVNAGSGDDVIDGGLGD 1139
Query: 552 D 552
D
Sbjct: 1140 D 1140
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 69/481 (14%), Positives = 122/481 (25%), Gaps = 49/481 (10%)
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
T + A+ +R+ G G ++ H + G G +
Sbjct: 945 ATNTLQGGKGNDRLEGSAGAETYRFNRGDGQDAINDFDHNARSSSGWGKVDRIVLGDGIT 1004
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
+ D ++ DS + I AV G+ +Y
Sbjct: 1005 KDELSLRRD--GNHMVILIGGPDSGDSITIENAYADGRYRIEAVVLADGSTFAPQDIPLY 1062
Query: 208 K--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + F + I G+D I + G N I
Sbjct: 1063 VSIGDNIIQGGEFAEVIATGEGND-------------IIHAEGGDDILDGGTGNDEINAG 1109
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + + G GND V S ++V G+D+ G G D+ L + N
Sbjct: 1110 SGNDVIDGGEGNDEVNAGSGDDVIDGGLGDDLLHGDDGNDSLQGGEGDDLLTVSGRGNNT 1169
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ D L + Q + N L G D E
Sbjct: 1170 LD---GGVGDDTLKVNRSADYYYQRDVARNAT-----------NTLQGGKGNDRLEGSAG 1215
Query: 386 FYEFGLSEG------RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK---EGRN 436
+ + G D ++ G R V G G
Sbjct: 1216 AETYRFNRGDGQDAINDFDHNARSSSGWGKVDRIVLGDGITKDELSLRRDGNHMVILIGG 1275
Query: 437 PDAFKALEYIASHED-----LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
PD+ ++ ++ D AD + + G + F + G
Sbjct: 1276 PDSGDSITIENAYTDGRYRIEAVVLADGSTFAPQDIPLYVSIGDNIIQGGEFAEVIATGE 1335
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
+D+ + G D G E ++ ++++ D G
Sbjct: 1336 GNDIIHAEGGDDILD----GGTGNDEINAGSGNDVIDGGEGNDEVNAGSGDDVIDGGLGD 1391
Query: 552 D 552
D
Sbjct: 1392 D 1392
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/315 (16%), Positives = 84/315 (26%), Gaps = 23/315 (7%)
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
T + A+ +R+ G G ++ H + G G +
Sbjct: 1197 ATNTLQGGKGNDRLEGSAGAETYRFNRGDGQDAINDFDHNARSSSGWGKVDRIVLGDGIT 1256
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
+ D ++ DS + T I AV G+ +Y
Sbjct: 1257 KDELSLRRD--GNHMVILIGGPDSGDSITIENAYTDGRYRIEAVVLADGSTFAPQDIPLY 1314
Query: 208 K--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + F + I G+D I + G N I
Sbjct: 1315 VSIGDNIIQGGEFAEVIATGEGND-------------IIHAEGGDDILDGGTGNDEINAG 1361
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + + G GND V S ++V G+D+ G G D+ L + N I
Sbjct: 1362 SGNDVIDGGEGNDEVNAGSGDDVIDGGLGDDLLHGDDGNDSLQGGEGDDLLTVSGRGNNI 1421
Query: 326 IVYDANEHKQDFLSDVERLRFAD----QCIDSVNVKQRSILEYTASYED--LIQVIGQDV 379
+ + + D K LE +A E + GQD
Sbjct: 1422 LDGGVGDDTLKVNRSADYYYQRDVARNATNTLQGGKGNDRLEGSAGAETYRFNRGDGQDA 1481
Query: 380 FESMKHFYEFGLSEG 394
H G
Sbjct: 1482 INDFDHNARSSSGWG 1496
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 43/293 (14%), Positives = 80/293 (27%), Gaps = 17/293 (5%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + +++ GS+ D+++G +++ GND G G D +
Sbjct: 611 ILASSGNDNLSGSNAADLILGLGGDDLLHGDDGNDSLQGGEGDDLLTVSG-RGNNTLDGG 669
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED--LIQVIGQDV 379
+ + DV R + K LE +A E + GQD
Sbjct: 670 VGDDTLKVNRSADYYYQRDVAR----NATNTLQGGKGNDRLEGSAGAETYRFNRGDGQDA 725
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
H G+ + LG + S R I G + +
Sbjct: 726 INDFDHNARSSSGWGKV----DRIVLGDG--ITKDELSLRRDGNHMVILIGGPDSGDSIT 779
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
+ + AD + + G + F + G +D+ +
Sbjct: 780 IENAYTDGRYRIEAVVLADGSTFAPQDIPLYVSIGDNIIQGGEFAEVIATGEGNDIIHAE 839
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G D G E ++ ++++ D G D
Sbjct: 840 GGDDILD----GGTGNDEINAGSGNDVIDGGEGNDEVNAGSGDDVIDGGLGDD 888
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 42/330 (12%), Positives = 80/330 (24%), Gaps = 28/330 (8%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND----------VFDG 300
S I N ++ + ++G G+D++ G+ N+ G+D DG
Sbjct: 609 SFILASSGNDNLSGSNAADLILGLGGDDLLHGDDGNDSLQGGEGDDLLTVSGRGNNTLDG 668
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVK 357
G DT + Y D L E RF
Sbjct: 669 GVGDDTLKVNRSADYYYQRDVARNATNTLQGGKGNDRLEGSAGAETYRFNRGDGQDAIND 728
Query: 358 QR-SILEYTASYEDLIQVIGQDVF--------ESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ + + V+G + + G + D Y
Sbjct: 729 FDHNARSSSGWGKVDRIVLGDGITKDELSLRRDGNHMVILIGGPDSGDSITIENAYTDGR 788
Query: 409 DDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
+ V +D A Y++ G + + + + ++ + D
Sbjct: 789 YRIEAVVLADGSTFAPQDIPLYVSIGDNIIQGGEFAEVIATGEGNDIIHAEGGDDILDGG 848
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
G D + + + D G ++ G D
Sbjct: 849 TGNDEINAGSGNDVIDGGEGNDEVNAGSGDDVIDGGLGDDLLHGDDGNDSLQGGEGDDLL 908
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ L D V D++
Sbjct: 909 TVSG--RGNNTLDGGVGDDTLKVNRSADYY 936
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 41/329 (12%), Positives = 86/329 (26%), Gaps = 35/329 (10%)
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
S D G A ++ + ++G ++ T+ GDD
Sbjct: 614 SSGNDNLSGSNAADLILGLGGDDLLHGDDGNDSLQGGEGDDLLTVSGRGNNTLDGGVGDD 673
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
L + D+ + +++ G + N + E+ + G+ N ++
Sbjct: 674 TLKVNRSADYYYQRDVARNATNTLQGGKGNDRLEGSAGAETYRFNRGDGQDAINDFDHNA 733
Query: 290 FESSGN---DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS------- 339
SSG D G+ + R N +++ D ++
Sbjct: 734 RSSSGWGKVDRIVLGDGI-------TKDELSLRRDGNHMVILIGGPDSGDSITIENAYTD 786
Query: 340 ---DVERLRFADQ------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+E + AD I +I++ E + G D+ +
Sbjct: 787 GRYRIEAVVLADGSTFAPQDIPLYVSIGDNIIQGGEFAEVIATGEGNDIIHAEGGDDILD 846
Query: 391 LSEGRDIT-----FDSYLYLGSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFK 441
G D D D++ G D + G + +
Sbjct: 847 GGTGNDEINAGSGNDVIDGGEGNDEVNAGSGDDVIDGGLGDDLLHGDDGNDSLQGGEGDD 906
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHF 470
L + ++ L +
Sbjct: 907 LLTVSGRGNNTLDGGVGDDTLKVNRSADY 935
>gi|73999559|ref|XP_544165.2| PREDICTED: similar to matrix metalloproteinase 16 isoform 1 [Canis
familiaris]
Length = 595
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 59/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 110 LTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSE 162
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 163 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 222
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 223 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 263
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 264 --FKLPN----DDLQGIQKIYGPPD 282
>gi|119485232|ref|ZP_01619617.1| Hemolysin-type calcium-binding toxin [Lyngbya sp. PCC 8106]
gi|119457460|gb|EAW38585.1| Hemolysin-type calcium-binding toxin [Lyngbya sp. PCC 8106]
Length = 681
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/280 (13%), Positives = 65/280 (23%), Gaps = 28/280 (10%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T+ G D D L + I I G+ + + + G+ D
Sbjct: 413 FTVLTISGTDSSDNLLGSDNDSEIFRGFSGDDIIFGFAQPDNFFGGEGNDLMFGNQNEDF 472
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ GN N+ F ND G++G D+ F + + D +
Sbjct: 473 LEGNDGNDTVFGGKENDTLLGNAGEDSLF----GDQDDDLLYGGENADWLNGNLGNDTIK 528
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + L G D+ G D
Sbjct: 529 G---------------GDGDDLAYGGQGNDVLEGEAGNDLVSGDNGDDVLI---GADPNI 570
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
D L G+D + N + I
Sbjct: 571 TDAG-QNEIDTLVGGVGADTFVLGDEIQVYYDDGDLNSSGLEDYALI-----QDFDNTQD 624
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
+ + + EG Y +G D+L +
Sbjct: 625 IIQLAGNAEDYRLDVQPEGLPQGTALYHTVGGQDELIAII 664
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 64/176 (36%), Gaps = 11/176 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + + G+D + GG +N L S+ G + + +
Sbjct: 460 GNDLMFGNQNEDFLEGNDGNDTV----FGGKENDTLLGNAGEDSLFGDQDDDLLYGGENA 515
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRF 321
+ + G+ GND + G +++ + GNDV +G +G D
Sbjct: 516 DWLNGNLGNDTIKGGDGDDLAYGGQGNDVLEGEAGNDLVSGDNGDDVLIGADPNITDAGQ 575
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ L D ++ + D ++S ++ ++++ + +D+IQ+ G
Sbjct: 576 NEIDTLVGGVGADTFVLGDEIQVYYDDGDLNSSGLEDYALIQDFDNTQDIIQLAGN 631
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 64/207 (30%), Gaps = 36/207 (17%)
Query: 203 GNNIYKIE---VQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIG 254
GN++ + + T++ +D L + +L G + + E+ +
Sbjct: 460 GNDLMFGNQNEDFLEGNDGNDTVFGGKENDTLLGNAGEDSLFGDQDDDLLYGGENADWLN 519
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVV---------IGNSANNVFFESSGN---------D 296
G N TI + G GNDV+ G++ ++V + N D
Sbjct: 520 GNLGNDTIKGGDGDDLAYGGQGNDVLEGEAGNDLVSGDNGDDVLIGADPNITDAGQNEID 579
Query: 297 VFDGSSGLDTF--------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
G G DTF +Y I +D + + E R
Sbjct: 580 TLVGGVGADTFVLGDEIQVYYDDGDLNSSGLEDYALIQDFDNTQDIIQLAGNAEDYRLD- 638
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVI 375
+ ++ ++LI +I
Sbjct: 639 -VQPEGLPQGTALYHTVGGQDELIAII 664
>gi|300864894|ref|ZP_07109739.1| hemolysin-type calcium-binding region (modular protein)
[Oscillatoria sp. PCC 6506]
gi|300337098|emb|CBN54889.1| hemolysin-type calcium-binding region (modular protein)
[Oscillatoria sp. PCC 6506]
Length = 529
Score = 76.4 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/298 (14%), Positives = 77/298 (25%), Gaps = 14/298 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ +P I GDD + G + ++ + G + +I +
Sbjct: 10 NDEIVGNPASDRIRGLDGDDTI----YGVGGDDTLEGSQGLDQLFGGDGADSILGEEGND 65
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++VG+SG D++ G ++ GND G DT F A + N
Sbjct: 66 TLVGNSGRDLIFGGVGDDCIHGGLGNDTILGQDNNDTLFGDAGDD----FVNGNLGFDIV 121
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D + E L + L G D
Sbjct: 122 TGGTGNDTIRGGED------DDSVFGNADDDYLYGDTGNDSLSGDRGSDQLLGGDGQDFL 175
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+G D F D N + +L +
Sbjct: 176 TGGDGEDTLFGEADNDVLNGDFGNDQIYAGKGNDTASGGAASDTILGGEGDDSLFGNDDN 235
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ + A+ G D + ++ F + LG+ ++ + G
Sbjct: 236 DFIFGGKANDALDGGFGDDSIAGGLGDDTIIGGFGNDNLLGAENNDILIGGEGTDTLT 293
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/313 (12%), Positives = 83/313 (26%), Gaps = 20/313 (6%)
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
+ +D R G TI + + GL +G + G +
Sbjct: 4 IFGTDENDEIVGNPASDRIRGLDGDDTIYGVGGDDTLEGSQGLDQLFGGDGADSILGEEG 63
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
+ + + D + G + G+ +
Sbjct: 64 NDTLVGNSGRDLIFGGVGDDCIHGGLGNDTILGQDN----------NDTLFGD---AGDD 110
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ + G+D + GG + + G N +++ + +
Sbjct: 111 FVNGNLGFDIVTGGTGNDTI----RGGEDDDSVFGNADDDYLYGDTGNDSLSGDRGSDQL 166
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G G D + G + F + NDV +G G D + A + +
Sbjct: 167 LGGDGQDFLTGGDGEDTLFGEADNDVLNGDFGNDQIY--AGKGNDTASGGAASDTILGGE 224
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
F +D F + D+++ + + +I G D ++
Sbjct: 225 GDDSLFGNDDNDFIFGGKANDALDGGFGDDSIAGGLGDDTIIGGFGNDNLLGAENNDILI 284
Query: 391 LSEGRDITFDSYL 403
EG D
Sbjct: 285 GGEGTDTLTGGSG 297
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/255 (11%), Positives = 63/255 (24%), Gaps = 12/255 (4%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
I+ G+D + +G N + G + T +++ G
Sbjct: 78 GGVGDDCIHGGLGNDTI----LGQDNNDTLFGDAGDDFVNGNLGFDIVTGGTGNDTIRGG 133
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIV 327
+D V GN+ ++ + +GND G G D F ++ + ++
Sbjct: 134 EDDDSVFGNADDDYLYGDTGNDSLSGDRGSDQLLGGDGQDFLTGGDGEDTLFGEADNDVL 193
Query: 328 YDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ Q + + + + L + + D +
Sbjct: 194 NGDFGNDQIYAGKGNDTASGGAASDTILGGEGDDSLFGNDDNDFIFGGKANDALDGGFGD 253
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G D + N G +L I
Sbjct: 254 DSIAGGLGDDTIIGGFGNDNLLGAENNDILIGGEGTDTLTGGSGSDLFVLGSGAGSLSII 313
Query: 447 ASHEDLINAFADAPD 461
++D + +
Sbjct: 314 TDYDDAADFVGLPSN 328
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 65/242 (26%), Gaps = 8/242 (3%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T D +G + I +YG
Sbjct: 91 NDTILGQDNNDTLFGDAGDDFVNGNLGFDIVTGGTGNDTIRGGEDDDSVFGNADDDYLYG 150
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ S + G +D + +G + G K
Sbjct: 151 DTGNDSLSGDRGSDQLLGGDGQDFLTGGDGEDTLFGEADNDVLNGDFGNDQIYAG----K 206
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
TI GDD +L G N ++ ++ G + +IA
Sbjct: 207 GNDTASGGAASDTILGGEGDD----SLFGNDDNDFIFGGKANDALDGGFGDDSIAGGLGD 262
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G GND ++G N++ G D G SG D F + + I + +
Sbjct: 263 DTIIGGFGNDNLLGAENNDILIGGEGTDTLTGGSGSDLFVLGSGAGSLSIITDYDDAADF 322
Query: 329 DA 330
Sbjct: 323 VG 324
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 76/275 (27%), Gaps = 16/275 (5%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
T+ + G DL+ GGV + +I G + N T+ +
Sbjct: 56 DSILGEEGNDTLVGNSGRDLI----FGGVGDDCIHGGLGNDTILGQDNNDTLFGDAGDDF 111
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G+ G D+V G + N+ +D G++ D + Y + + + +
Sbjct: 112 VNGNLGFDIVTGGTGNDTIRGGEDDDSVFGNADDD--YLYGDTGNDSLSGDRGSDQLLGG 169
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ D E F + D +N + + D +
Sbjct: 170 DGQDFLTGGDGEDTLFGEADNDVLNGDFGNDQIYAGKGNDTASGGAASDTILGGEGDDSL 229
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
++ D F D L FG D A G L ++
Sbjct: 230 FGNDDNDFIFGGKA----NDALDGGFGDDSIA-----GGLGDDTIIGGFGNDNLLGAENN 280
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ LI G D F + D
Sbjct: 281 DILIGGEGTDTLTGGSGSDLFVLGSGAGSLSIITD 315
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 46/311 (14%), Positives = 85/311 (27%), Gaps = 18/311 (5%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D G T D AD G T++ ++ I +G
Sbjct: 26 DGDDTIYGVGGDDTLEGSQGLDQLFGGDGADSILGEEGNDTLVGNSGRDLIFGGVGDDCI 85
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G + G DN+ DA + + DIV
Sbjct: 86 HGGLGNDTILGQDNNDTL----------------FGDAGDDFVNGNLGFDIVTGGTGNDT 129
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+G ++ D + T DS D L+GG + ++ G
Sbjct: 130 IRGGEDDDSVFGNADD-DYLYGDTGNDSLSGDRGSDQLLGGDGQDFLTGGDGEDTLFGEA 188
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + + + GND G +A++ G+D G+ D F + +
Sbjct: 189 DNDVLNGDFGNDQIYAGKGNDTASGGAASDTILGGEGDDSLFGNDDND-FIFGGKANDAL 247
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
F + I + + L A+ + + L + + + G
Sbjct: 248 DGGFGDDSIAGGLGDDTIIGGFGNDNLLGAENNDILIGGEGTDTLTGGSGSDLFVLGSGA 307
Query: 378 DVFESMKHFYE 388
+ + +
Sbjct: 308 GSLSIITDYDD 318
>gi|325981731|ref|YP_004294133.1| Hemolysin-type calcium-binding region [Nitrosomonas sp. AL212]
gi|325531250|gb|ADZ25971.1| Hemolysin-type calcium-binding region [Nitrosomonas sp. AL212]
Length = 335
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 68/204 (33%), Gaps = 7/204 (3%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + ++ + + G T+ +++ G +GNDV+ GN+ N+
Sbjct: 31 DTGNLTISDSFDINVSSLDITANGTSGADTLNGGNGNDTLNGLAGNDVLNGNAGNDWLDG 90
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC- 350
SG D DGS+G DT++ + + V + +++E L +
Sbjct: 91 GSGIDRMDGSTGDDTYWVNSFGDVVAEISNNGNDTVV--SSISYTLGANLENLTLSGVTA 148
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
I + + + S + G D+ D +S D
Sbjct: 149 IFGIGNAADNQIAGGESANIIWGRAGNDMLSGKGGADTLLG----DTGDNSLDGGVGNDL 204
Query: 411 LRNVFGSDRGAAARHYITHGVKEG 434
L G+D + R Y + E
Sbjct: 205 LIGGTGTDTYSFGRGYGKDIIVEN 228
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 66/194 (34%), Gaps = 10/194 (5%)
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
V +D S ++ A +D + GS G+
Sbjct: 44 NVSSLDITANGTSGADTLNGGNGNDTLNGLAGNDVLNGNAGNDWLDGGSGIDRMDGSTGD 103
Query: 205 NIYKIEV---------QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ Y + + + +I + G +L +LTL G + N GG
Sbjct: 104 DTYWVNSFGDVVAEISNNGNDTVVSSISYTLGANLENLTLSGVTAIFGIGNAADNQIAGG 163
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N+ I + + G G D ++G++ +N GND+ G +G DT+ +
Sbjct: 164 ESANI-IWGRAGNDMLSGKGGADTLLGDTGDNSLDGGVGNDLLIGGTGTDTYSFGRGYGK 222
Query: 316 YKIYRFENAIIVYD 329
I + A+ V D
Sbjct: 223 DIIVENDPALGVLD 236
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 31/217 (14%), Positives = 55/217 (25%), Gaps = 8/217 (3%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T + + + + D+ + L L
Sbjct: 16 TANTSGKFSVIVTAKDTGNLTISDSFDINVSSLDIT--ANGTSGADTLNGGNGNDTLNGL 73
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A + L G D + S G D + G + G+D ++
Sbjct: 74 AGNDVLNGNAGNDWLDGGSGIDRMDGSTGDDTYW--VNSFGDVVAEISNNGNDTVVSSIS 131
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ--VGKDHFSNFGCEEGRFVTF 483
Y E A+ I + D A ++ +++ G D S G +
Sbjct: 132 YTLGANLENLTLSGVTAIFGIGNAADNQIAGGESANIIWGRAGNDMLSGKGGADTLLGDT 191
Query: 484 DSYLY--LGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
D L G+D + R Y + E
Sbjct: 192 GDNSLDGGVGNDLLIGGTGTDTYSFGRGYGKDIIVEN 228
>gi|114685393|ref|XP_515022.2| PREDICTED: stromelysin-3 [Pan troglodytes]
Length = 469
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 62/199 (31%), Gaps = 60/199 (30%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEET 73
L W + Y+ + QE R AL WS V LTF E
Sbjct: 81 LSGGRWEKTDLTYRILRFPWQLV-----------QEQVRQTMAEALKVWSDVTPLTFTEV 129
Query: 74 SIH-SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
+DI + + P+ +++FD + W G +G
Sbjct: 130 HEGRADIVIDFARYWHGDDLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGDDQG 187
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T L A HE GH LGL H + ++MS F +F
Sbjct: 188 TDLLQVAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTF 220
Query: 178 GYCATPMVSDIVAVQKIYG 196
Y + D VQ +YG
Sbjct: 221 RYPLSLSPDDRRGVQHLYG 239
>gi|260431816|ref|ZP_05785787.1| bifunctional hemolysin/adenylate cyclase [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415644|gb|EEX08903.1| bifunctional hemolysin/adenylate cyclase [Silicibacter
lacuscaerulensis ITI-1157]
Length = 743
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/329 (12%), Positives = 78/329 (23%), Gaps = 14/329 (4%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + +G T D G+ I+
Sbjct: 371 VADLGTGIISNDGHGGSDTITGVEHVSSFRASMMDDSVIGSDGRDQIILMAGNDTADGGD 430
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G V+ + + + ++ + + + + AV
Sbjct: 431 GFDLLRYDRTGVEAVNVNLETGIATGIWRGEAFTHEISNFEEVRGSREGSDTIIGNDAVD 490
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ G+ + ++ D L GG + +
Sbjct: 491 EHLEGSGGNDSISGGGGSDVLYGGSGADSLEGGSAKDHL----HGGNGQDVLHGGIGFDR 546
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N + + G G+D++ G N+ GND G SG D
Sbjct: 547 LTGGGGNDRLFGEGGRDFAQGGLGHDMIRGGIGNDRLLGQGGNDRIYGGSGDD--VLNGN 604
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+++ V+ ++L L A + L
Sbjct: 605 VGTDRLFGGAGNDKVFGG--------VGDDKLFGGGGNDSVSGGSGNDSLYGGAGEDTLN 656
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDS 401
G D F SEG D D
Sbjct: 657 GGTGNDTLRGDSQTDVFVFSEGEDQVLDF 685
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 65/518 (12%), Positives = 123/518 (23%), Gaps = 68/518 (13%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E D + T + + D G G ++ +
Sbjct: 177 NELITGDDTDNDLDGSAGNDTILGLDGDDWLVGYAGDDSLEGGEGSDSLYGGAGDDYL-- 234
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+PG V + D + ++ F + ++
Sbjct: 235 -----NPGDNTYYDYVVPGTGNDTVDFTDITSLNGFAEIGMQDLDAGVTATLNAATNTGI 289
Query: 191 VQKIYGAPKGSLG--------------------NNIYKIEVQQKDSPFIQTIYDSGGDDL 230
+ K LG ++ IY G+D
Sbjct: 290 IDKGANGTTTILGLNNPLIAGEDGGTGLYATLHDDTINF---TTGPDGYFQIYALAGNDT 346
Query: 231 LDLTLIGGVKNYI-------------DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
++LT GG I DL T S+ G+ + TI + S S +
Sbjct: 347 INLTGDGGTHVRISSDWWNMSSGMVADLGTGIISN-DGHGGSDTITGVEHVSSFRASMMD 405
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-IYRFENAIIVYDANEHKQD 336
D VIG+ + +GND DG G D Y + E
Sbjct: 406 DSVIGSDGRDQIILMAGNDTADGGDGFDLLRYDRTGVEAVNVNLETGIATGIWRGEAFTH 465
Query: 337 FLSDVERLRFA--DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+S+ E +R + N LE + + + G DV
Sbjct: 466 EISNFEEVRGSREGSDTIIGNDAVDEHLEGSGGNDSISGGGGSDVLYGGSGADSLEGGSA 525
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
+D + + + G R + G + + ++ L+
Sbjct: 526 KDHLHGGNGQDVLHGGIGFDRLTGGGGNDRLFGEGGRDFAQGGLGHDMIRGGIGNDRLLG 585
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ G D ++ + + G
Sbjct: 586 QGGNDRIYGGSGDD---------------------VLNGNVGTDRLFGGAGNDKVFGGVG 624
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ ++ + ++ L + G D
Sbjct: 625 DDKLFGGGGNDSVSGGSGNDSLYGGAGEDTLNGGTGND 662
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 4/124 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + GG+D + GG + + + G N +
Sbjct: 570 GHDMIRGGIGNDRLLGQGGNDRI----YGGSGDDVLNGNVGTDRLFGGAGNDKVFGGVGD 625
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G GND V G S N+ + +G D +G +G DT + + ++ E+ ++ +
Sbjct: 626 DKLFGGGGNDSVSGGSGNDSLYGGAGEDTLNGGTGNDTLRGDSQTDVFVFSEGEDQVLDF 685
Query: 329 DANE 332
A +
Sbjct: 686 GAED 689
>gi|85703095|ref|ZP_01034199.1| hypothetical protein ROS217_20177 [Roseovarius sp. 217]
gi|85672023|gb|EAQ26880.1| hypothetical protein ROS217_20177 [Roseovarius sp. 217]
Length = 970
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/340 (16%), Positives = 96/340 (28%), Gaps = 31/340 (9%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G G+D ++G + +++ +G+DV G G D + + + + ++
Sbjct: 580 LNGGQGDDTLLGGAGDDLLDGGAGDDVIRGDLGDDAAVFDTITRASAAFSLTSEG-LWVV 638
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQR---------------SILEYTASYEDLIQVI 375
+ D L VE + F+DQ + +V SIL T + L+
Sbjct: 639 SALGTDELIGVEWIEFSDQRLRVADVMVEILDDPDVFAVALVQGSILIGTDHNDTLLGQA 698
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D+ G D S D G I G +
Sbjct: 699 GADMLSGGLGHDHLEGGGGNDSI--SASDGDDLVDAGPGRDFIGGGPGNDTIDGGEGDDV 756
Query: 436 NPDAFKALEYIASHE-DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
F + + D++ A L + + G + F + D
Sbjct: 757 IGAGFGDDSALGGNGNDVVAGGAGNDMLAGGAGNDSISGSF--GNDLIFGNG---DDDDI 811
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH--EDLI-NAFADAPDLVQAGK 551
A A H G + + +++A +DLI D AG
Sbjct: 812 GGGAGRDTINAGAGHDNVGGGEGDDDILGGDGNDFLAGGGRDDLIDGGTGDDTINGGAGN 871
Query: 552 DHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA 591
D G F+ D+ F
Sbjct: 872 D--LMMGGAGADQFVFSAFFNGER--DVIPDFKDGVDRLF 907
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 55/246 (22%), Gaps = 37/246 (15%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D+ + V+ I + T+ ++ G ++ + + G GND + + +++
Sbjct: 673 DVFAVALVQGSILIGTDHNDTLLGQAGADMLSGGLGHDHLEGGGGNDSISASDGDDLVDA 732
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G D G G DT + +
Sbjct: 733 GPGRDFIGGGPGNDT-------------------------------------IDGGEGDD 755
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ + G D+ S G D+ F +
Sbjct: 756 VIGAGFGDDSALGGNGNDVVAGGAGNDMLAGGAGNDSISGSFGNDLIFGNGDDDDIGGGA 815
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ G + D L + + D G D
Sbjct: 816 GRDTINAGAGHDNVGGGEGDDDILGGDGNDFLAGGGRDDLIDGGTGDDTINGGAGNDLMM 875
Query: 472 NFGCEE 477
+
Sbjct: 876 GGAGAD 881
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 66/216 (30%), Gaps = 13/216 (6%)
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT-SVMSY 165
+ T+L + LG H G + D D D+ +
Sbjct: 682 GSILIGTDHNDTLLGQAGADMLSGGLGHDHLEGGGGNDSISASDGDDLVDAGPGRDFIGG 741
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
D++ D A+ G +I S
Sbjct: 742 GPGNDTIDGGEGDDVIGAGFGDDSALGGN--GNDVVAGG---AGNDMLAGGAGNDSISGS 796
Query: 226 GGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
G+DL+ D G ++ I+ ++GG E + I + + G +D+
Sbjct: 797 FGNDLIFGNGDDDDIGGGAGRDTINAGAG-HDNVGGGEGDDDILGGDGNDFLAGGGRDDL 855
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ G + ++ +GND+ G +G D F + A
Sbjct: 856 IDGGTGDDTINGGAGNDLMMGGAGADQFVFSAFFNG 891
>gi|329849048|ref|ZP_08264076.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844111|gb|EGF93680.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 2662
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 71/544 (13%), Positives = 143/544 (26%), Gaps = 32/544 (5%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
++LL ++ I D + D+ + ++ ++ E
Sbjct: 1359 NAGNNLLDGGLGNDTMIGGLGDDTYVVNATTDLVTEAVGEGSDTVQSSATFTLSSNI--E 1416
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
++ N +S + D G+G + + A +
Sbjct: 1417 TLTLTGAGNINGVGNAGNNLITGNSGNNLLDGGAGNDSLTGGLGDDSYIVDAAGDAVTEN 1476
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
Y + G + ++ + + ++ + + + G + + A+
Sbjct: 1477 NSEGTDTVYASVTYLLGANLEHLSLTGSANINGTGNALGNNLIGNTGNNRLDGAAGVNAL 1536
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
G LGN+ Y + T Y S G D + + +
Sbjct: 1537 -------FGGLGNDTYVVATVNDSV----TEYASEGTDTV---------------ESTIT 1570
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G + I + + G++ N+ + GN+ NNV +GND G +G DT++ A
Sbjct: 1571 YTLGADVENLILTGSANINGTGNTLNNTLTGNAGNNVLDGGAGNDTMTGGAGNDTYYVQA 1630
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ E +V + I++ ++L L
Sbjct: 1631 GADNVVELSGEGTDLVISTVTYSLSGRQAENLTLTGAAAINATGNGVGNVLTGNTGNNLL 1690
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D F +S D+ ++ G+ V + +
Sbjct: 1691 DGGTGNDTMVGGLGDDTFVVSATGDVVTEATS-AGTDTVQTAVTLTLAVNVENLVLLSTA 1749
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
G L S+ L D +G D + G VT + +
Sbjct: 1750 LNGTGNGLGNVLTGNVSNNLLDGGAGDDSLSGGLGDDSYV--VDAAGDVVTEAASEGTDT 1807
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
G +L A + L G
Sbjct: 1808 VSSSVAYVLGASVENLI-LTGSANINGTGNALNNSLTGNAGNNRLDGGAGVNSLAGGLGD 1866
Query: 552 DHFS 555
D +
Sbjct: 1867 DTYV 1870
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 79/564 (14%), Positives = 155/564 (27%), Gaps = 40/564 (7%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + AL S V+ FE ++ F ++ N
Sbjct: 2029 DSYMVDVEGDVVTEAVGEGTDQVVAAL---SYVLGANFENLTLGGTGNFNATGNSGNNVI 2085
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + G G T + +G ALG G + +
Sbjct: 2086 VGNIGNNRLDGGAGTNSLTGGAGDDTYVVATVADSVGEALGDGTDTVEAAITYTLGANVE 2145
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ ++++ + G G LGN+ Y I
Sbjct: 2146 NLILTGAANINGTGTAGNNVLTGNSGNNVL----------------SGGLGNDTYFI--- 2186
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
Q + G D + YI+ S + + +++ S+
Sbjct: 2187 QNAGDNVVEANGDGTDTIYSTVTYALSGRYIE------SLVLTGAAAINATGNSLANSLT 2240
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G + + G + ++ G D G +G D+ Y + + N +
Sbjct: 2241 GNDGANSLTGLAGHDDLDGGLGVDTLIGGAGDDS--YGVDNAGDVVTELVNEGTDTVRSS 2298
Query: 333 HKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEF 389
++VE L ++ ++L A L +G D ++
Sbjct: 2299 ISYTLATNVENLILLGASNVNGTGNDLNNVLTGNAGTNLLTGGLGDDSYYIQNAADNVSE 2358
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G D F S Y + + N A+ D L+ + H
Sbjct: 2359 AAGAGIDTIFSSVTYSLAGKQVEN-LTLTGVASLNATGNGLANGLTGNDGANTLDGGSGH 2417
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ L + G D + + + ++ + +
Sbjct: 2418 DRLNGGLGADSLIGGTGNDTYVIESAGD---IITEAAGAGTDTVESSITYILATNTENLT 2474
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
G + L + + L + VQ D+ + G +G + F+
Sbjct: 2475 LTGTAALNGTGNEFSNILTGNSGNNILTGGLGNDTYYVQNTGDNVAELGG-QGTDVIFST 2533
Query: 570 DLY--LTSYDDLWNVFGSDRSAAA 591
Y Y + N+ GS A
Sbjct: 2534 VTYSLSGRYAETINLTGSADINAT 2557
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 60/401 (14%), Positives = 118/401 (29%), Gaps = 36/401 (8%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
N ++ + D G+G T + + + A
Sbjct: 1907 TGAANINGIGNTLGNVLTGNTGNNLLDGGAGDDTAIGGLGDDTFVVGSVGDVVTEA---A 1963
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G+ V + LT + + + M+ + +
Sbjct: 1964 AEGTDLVQSAVTWTLGANVENLTLTGSANASGTGNGSNNVIIANSGNNMLDGLAGNDSLS 2023
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G LG++ Y + D GD + + G + + S + G
Sbjct: 2024 GG----LGDDSY--------------MVDVEGDVVTEAVGEGTDQVV-----AALSYVLG 2060
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
T + G+SGN+V++GN NN +G + G +G DT+ +
Sbjct: 2061 ANFENLTLGGTGNFNATGNSGNNVIVGNIGNNRLDGGAGTNSLTGGAGDDTYVVATVADS 2120
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQV 374
+ V ++VE L I+ ++L + L
Sbjct: 2121 VGEALGDGTDTV--EAAITYTLGANVENLILTGAANINGTGTAGNNVLTGNSGNNVLSGG 2178
Query: 375 IGQDV--FESMKHFYEFGLSEGRDITFDSYLY--LGSYDDLRNVFGSDRGAAARHYITHG 430
+G D ++ +G D + + Y G Y + + G+ A + + +
Sbjct: 2179 LGNDTYFIQNAGDNVVEANGDGTDTIYSTVTYALSGRYIESLVLTGAAAINATGNSLANS 2238
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ D +L +A H+DL + G D +
Sbjct: 2239 L---TGNDGANSLTGLAGHDDLDGGLGVDTLIGGAGDDSYG 2276
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 68/494 (13%), Positives = 135/494 (27%), Gaps = 51/494 (10%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
++ + NG+ +S D G+G T +
Sbjct: 1184 TLTGSASVNGTGNGFNNILNGNSGNNRLDGGANNDTMSGGVGDDTYV------------- 1230
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+GG D D+ +++ + +
Sbjct: 1231 ------ISGGGDSVVEGADAGIDTVESAIAYLLGANVENLLLTGSAAVN----------- 1273
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-LTLIGGVKNYIDLNTESWSS 252
G+ NN+ +L D + + G + ++T ++S
Sbjct: 1274 ----GTGNSLNNVLTGNSGGNTLTGGTGNDTYYVQNLTDNVVELVGEGTDLIVSTVAYSL 1329
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+G +N+T+ + + G+ ++++ GN+ NN+ GND G G DT+ A
Sbjct: 1330 VGRQVENLTLTGSDNV-NATGNDSDNILTGNAGNNLLDGGLGNDTMIGGLGDDTYVVNAT 1388
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDL 371
+ L E + V + S++E L I+ V +++ + L
Sbjct: 1389 TDLVTEAVGEGSDTV--QSSATFTLSSNIETLTLTGAGNINGVGNAGNNLITGNSGNNLL 1446
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D + + D + D + GA H G
Sbjct: 1447 DGGAGNDSLTGGLGDDSYIVDAAGDAV--TENNSEGTDTVYASVTYLLGANLEHLSLTGS 1504
Query: 432 KE--GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG----RFVTFDS 485
G L + L A +G D + + D+
Sbjct: 1505 ANINGTGNALGNNLIGNTGNNRLDGAAGVNALFGGLGNDTYVVATVNDSVTEYASEGTDT 1564
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI---ASHEDLINAFAD 542
+Y L + + + G + A ++ + +
Sbjct: 1565 VESTITYT-LGADVENLILTGSANINGTGNTLNNTLTGNAGNNVLDGGAGNDTMTGGAGN 1623
Query: 543 APDLVQAGKDHFSN 556
VQAG D+
Sbjct: 1624 DTYYVQAGADNVVE 1637
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/391 (11%), Positives = 94/391 (24%), Gaps = 24/391 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM-----TI 262
+ Q I G + + + GG + +
Sbjct: 1052 TGDEQLDGGLGDDFIDGGAGTNTVAYLSATSGVTVSLATPGTAQDTGGAGVDTLYNLQNL 1111
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ +S+ GS GN+++ G S + G+D + + D + +
Sbjct: 1112 TGSSYNDSLTGSDGNNLLDGRSGADSLAGGLGDDTYYVENAGDVVNEATSAGTDTVLSTV 1171
Query: 323 NAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ VE L ++ +IL + L D
Sbjct: 1172 TFTLA----------GKQVEHLTLTGSASVNGTGNGFNNILNGNSGNNRLDGGANNDTMS 1221
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ +S G D + + + G
Sbjct: 1222 GGVGDDTYVISGGGDSVVEGADAGIDTVESAIAYLLGANVENLLLTGSAAVNGTGNSLNN 1281
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
L + L + VQ D+ E D + +Y + +
Sbjct: 1282 VLTGNSGGNTLTGGTGNDTYYVQNLTDNVVELVGE-----GTDLIVSTVAYSLVGRQVEN 1336
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIA---SHEDLINAFADAPDLVQAGKDHFSNFG 558
+ + G + ++ +I D +V A D +
Sbjct: 1337 LTLTGSDNVNATGNDSDNILTGNAGNNLLDGGLGNDTMIGGLGDDTYVVNATTDLVTEAV 1396
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDRSA 589
E ++ + L+S + + G+
Sbjct: 1397 GEGSDTVQSSATFTLSSNIETLTLTGAGNIN 1427
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 70/477 (14%), Positives = 123/477 (25%), Gaps = 30/477 (6%)
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
D G + + + LG V D+ L
Sbjct: 1110 NLTGSSYNDSLTGSDGNNLLDGRSGADSLAGGLG-DDTYYVENAGDVVNEATSAGTDTVL 1168
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI 219
++V + G + + G GN +
Sbjct: 1169 STVTFTLAGKQVEHLTLTGSASVNGTGN--------GFNNILNGN---SGNNRLDGGANN 1217
Query: 220 QTIYDSGGDDLLDLTLIG-----GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
T+ GDD ++ G G ID + + + G + + + G+
Sbjct: 1218 DTMSGGVGDDTYVISGGGDSVVEGADAGIDTVESAIAYLLGANVENLLLTGSAAVNGTGN 1277
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
S N+V+ GNS N +GND + + D I +V E+
Sbjct: 1278 SLNNVLTGNSGGNTLTGGTGNDTYYVQNLTDNVVELVGEGTDLIVSTVAYSLVGRQVENL 1337
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLS 392
SD D ++L+ + +I +G D + +
Sbjct: 1338 TLTGSDNVNATGNDSDNILTGNAGNNLLDGGLGNDTMIGGLGDDTYVVNATTDLVTEAVG 1397
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
EG D S + S + G L+ A ++ L
Sbjct: 1398 EGSDTVQSSATFTLSSN--IETLTLTGAGNINGVGNAGNNLITGNSGNNLLDGGAGNDSL 1455
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
D +V D + E V LG+ + ++ GS
Sbjct: 1456 TGGLGDDSYIVDAAGDAVTENNSEGTDTVYASVTYLLGANLEHLSLTGSAN------ING 1509
Query: 513 HGVKEGRNP---DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
G G N L+ A L + +V D + + E ++
Sbjct: 1510 TGNALGNNLIGNTGNNRLDGAAGVNALFGGLGNDTYVVATVNDSVTEYASEGTDTVE 1566
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 76/268 (28%), Gaps = 34/268 (12%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + + + N T S + AD G G T + +A I A G
Sbjct: 2393 ATGNGLANGLTGNDGANTLDGGSGHDRLNGGLGADSLIGGTGNDTYVIESAGDIITEAAG 2452
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ + + + + ++ +++ + G
Sbjct: 2453 AGTDTVESSITYILATNTENLTLTGTAALNGTGNEFSNILTGNSGNNIL----------- 2501
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G LGN+ Y ++ + + + +L G I+L +
Sbjct: 2502 -----TGGLGNDTYYVQNTGDNVAELGGQGTDVIFSTVTYSLSGRYAETINLTGSADI-- 2554
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ G+S + +IGN N G DV G G D F + + S
Sbjct: 2555 ----------------NATGNSLANTLIGNDGINTLNGKGGVDVLTGGLGADIFLFESAS 2598
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDV 341
I F A +++V
Sbjct: 2599 GKDSITDFSAAQNDSIDINAYTGGVANV 2626
Score = 37.5 bits (85), Expect = 7.8, Method: Composition-based stats.
Identities = 38/389 (9%), Positives = 97/389 (24%), Gaps = 44/389 (11%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + + + N + + + D G G + NA +
Sbjct: 2230 ATGNSLANSLTGNDGANSLTGLAGHDDLDGGLGVDTLIGGAGDDSYGVDNAGDVVTE--- 2286
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L++ G+ + + L + + + + G T +++ +
Sbjct: 2287 LVNEGTDTVRSSISYTLATNVENLILLGASNVNGTGNDLNNVLTGNAGTNLLTGGLGDDS 2346
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE----- 248
Y + + S ++ ++L + L
Sbjct: 2347 YYIQNAADNVSEAAGAGIDTIFSSVTYSLAGKQVENLTLTGVASLNATGNGLANGLTGND 2406
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG-------------- 294
+++ G + + +S++G +GND + SA ++ E++G
Sbjct: 2407 GANTLDGGSGHDRLNGGLGADSLIGGTGNDTYVIESAGDIITEAAGAGTDTVESSITYIL 2466
Query: 295 ----------------------NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+++ G+SG + + Y + + +
Sbjct: 2467 ATNTENLTLTGTAALNGTGNEFSNILTGNSGNNILTGGLGNDTYYVQNTGDNVAELGGQG 2526
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
F + L ++ + LI G +
Sbjct: 2527 TDVIFSTVTYSLSGRYAETINLTGSADINATGNSLANTLIGNDGINTLNGKGGVDVLTGG 2586
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
G DI + +D
Sbjct: 2587 LGADIFLFESASGKDSITDFSAAQNDSID 2615
>gi|298488801|ref|ZP_07006829.1| mannuronan C-5-epimerase, putative [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298156719|gb|EFH97811.1| mannuronan C-5-epimerase, putative [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 1605
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/325 (12%), Positives = 85/325 (26%), Gaps = 12/325 (3%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL +S + + ++ G+S +D ++G++ N+V G D G G
Sbjct: 1201 DLGFRGDASDNNDPTAIFESGQNEGGNIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDG 1260
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L I+ ++++
Sbjct: 1261 NDIYVVDNALDTVTESNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVI 1320
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRG 420
AS L G D+ + + + R + ++ +G D + + S
Sbjct: 1321 TGNASNNVLDGAAGADLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTL 1380
Query: 421 AAARH---YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH-FSNFGCE 476
A G + A + +
Sbjct: 1381 GANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTS 1440
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ L ++L +D ++ L A + L
Sbjct: 1441 AQQATGGSGLDTLKGTENLTGSQFADTLTGNKNANV-----LNGGSGNDTLSGGAGEDVL 1495
Query: 537 INAFADAPDLVQAGKDHFSNFGYEE 561
I + G D + E
Sbjct: 1496 IGGSGADTLIGGTGADRYVFNNSNE 1520
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/293 (15%), Positives = 89/293 (30%), Gaps = 14/293 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E ++G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMILGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + +V D + LS++ ++N+ + L+ T
Sbjct: 447 YRTATTSSTDLVTDFDISQDRIDLSNLGFTGLGSGKGGTLNISYNATLDRTYVKSLDADA 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ I D L G+D G
Sbjct: 507 SGNRFELGLSGNLKDTLNASHFIFQRVIEGTAGGDTLTGTDGNDVMN-----GNAGTDRI 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ A + L + D + N+ + +
Sbjct: 562 NGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNYNASGTKQSDTITDF 614
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 46/305 (15%), Positives = 82/305 (26%), Gaps = 43/305 (14%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE N + + S + E + + N
Sbjct: 1262 DIYVVDNALDTVTESNDS-PSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVI 1320
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ + AD+ G G +
Sbjct: 1321 TGNASNNVLDGAAGADLLTGGDGSDSY--------------------------------- 1347
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
Y +D+ V + Q +D A+ + + I G + N ++
Sbjct: 1348 YVDDAADRVVETNADQQVGGIDTVLSSLASYTLGANLENIVITGTGAANATGNT--LDNL 1405
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ G+D + L + LNT + + GG + E++
Sbjct: 1406 IYAGAGDNVMDGRDGNDTVSY-LFATAGVTVALNTSAQQATGGS----GLDTLKGTENLT 1460
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS D + GN NV SGND G +G D S + A N
Sbjct: 1461 GSQFADTLTGNKNANVLNGGSGNDTLSGGAGED--VLIGGSGADTLIGGTGADRYVFNNS 1518
Query: 333 HKQDF 337
++
Sbjct: 1519 NETGL 1523
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 5/149 (3%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ D + S + K + + SG +L
Sbjct: 716 PGSFSDPDSNTLTYSATLTDNSALPDWLKFDSKTLTFSGTPGGTASGLYSVLLTASDATG 775
Query: 240 KNY-----IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ I++ + ++ G E + ++++G G+D + G++ ++ +G
Sbjct: 776 ASVADSFAINVGNVTPGTLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIINGGAG 835
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
D G G DTF Y + Y+ Y
Sbjct: 836 RDALYGGDGADTFVYSTLTDSYRDYDAGG 864
>gi|5545323|dbj|BAA82538.1| ORF12 [Actinobacillus actinomycetemcomitans]
Length = 1416
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--F 567
+ R F + Y+ +++D+ A D +Q HF ++G++EGR+ + F
Sbjct: 598 FNKTDYDILRKSGLFNSEYYLNNNQDVREA---NVDPIQ----HFLDYGWKEGRNPSPKF 650
Query: 568 NPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQF 612
+ + YL SY+D+ + HY+ +G KEGR I ++F
Sbjct: 651 DLNSYLDSYNDVKSA----NINPLLHYVKYGKKEGRK--IKPVEF 689
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 12/84 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
F+S YL + D+R +H++ +G KEGRNP F Y+ S+ D+ +A
Sbjct: 612 FNSEYYLNNNQDVREA----NVDPIQHFLDYGWKEGRNPSPKFDLNSYLDSYNDVKSAN- 666
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSI 565
P L H+ +G +EGR I
Sbjct: 667 INPLL------HYVKYGKKEGRKI 684
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
F+S YL + D+R +H++ +G KEGRNP F Y+ S+ D+ +A
Sbjct: 611 LFNSEYYLNNNQDVREAN----VDPIQHFLDYGWKEGRNPSPKFDLNSYLDSYNDVKSAN 666
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFV 481
+ H+ +G +EGR +
Sbjct: 667 INPLL-------HYVKYGKKEGRKI 684
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 22/117 (18%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
R F + Y+ +++D+ A D HF ++G +EGR + FD YL SY
Sbjct: 607 RKSGLFNSEYYLNNNQDVREANVDP-------IQHFLDYGWKEGRNPSPKFDLNSYLDSY 659
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGR--NPDAFKALEYIAS-------HEDLINAF 540
+D+++ HY+ +G KEGR P F L I + + LI+ F
Sbjct: 660 NDVKSA----NINPLLHYVKYGKKEGRKIKPVEFGMLYLIKNMIFLIKKNPSLISKF 712
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FD 400
D I + S + + + + ++HF ++G EGR+ + FD
Sbjct: 597 IFNKTDYDILRKSGLFNSEYYLNNNQDVREANV-----DPIQHFLDYGWKEGRNPSPKFD 651
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
YL SY+D+++ HY+ +G KEGR
Sbjct: 652 LNSYLDSYNDVKSAN----INPLLHYVKYGKKEGR 682
>gi|218530448|ref|YP_002421264.1| glycosyl transferase family 2 [Methylobacterium chloromethanicum
CM4]
gi|218522751|gb|ACK83336.1| glycosyl transferase family 2 [Methylobacterium chloromethanicum
CM4]
Length = 1059
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/242 (19%), Positives = 69/242 (28%), Gaps = 46/242 (19%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD Y +Y D+ G RHY+ HG EGR+P A F L Y H +
Sbjct: 57 PFFDPAFYRSAYPDVAAGGGD----PLRHYLDHGWLEGRDPSAVFSTLFYADRH--FADR 110
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDS------YLYLGSYDDLRNVFGSDRGAAARH 509
P L G F + Y + R H
Sbjct: 111 APINPLLHYAGLSPTERLRVATQPGPDFPALQAGVVEPYFDAPYYARLAGLEGGEDPLAH 170
Query: 510 YITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE-------- 560
Y+T G + G +P+ F Y+ H + +P A
Sbjct: 171 YLTKGWRRGLDPNDAFSGDAYLQRHAHMRR-LGVSPLYHFAATRRLQASEAAAPPARRAK 229
Query: 561 -------------------EGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
E + F+ + YL + D+ +H++ G +E
Sbjct: 230 PQAALLPADPAEASDAQIYETVAAAFDREHYLDTNPDIRR----SGIDPVRHFLDFGARE 285
Query: 602 GR 603
R
Sbjct: 286 DR 287
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 45/161 (27%), Gaps = 35/161 (21%)
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 537
FD Y +Y D+ G RHY+ HG EGR+P A F L Y H
Sbjct: 55 AAPFFDPAFYRSAYPDVAAGGGD----PLRHYLDHGWLEGRDPSAVFSTLFYADRH--FA 108
Query: 538 NAFADAPDLVQAGKDHF---------------SNFGYEEGRSITFNPDLYLTSYDDLWNV 582
+ P L AG G E F+ Y
Sbjct: 109 DRAPINPLLHYAGLSPTERLRVATQPGPDFPALQAGVVE---PYFDAPYYA------RLA 159
Query: 583 FGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
HY+T G + G + S ++
Sbjct: 160 GLEGGEDPLAHYLTKGWRRG----LDPNDAFSGDAYLQRHA 196
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/311 (16%), Positives = 82/311 (26%), Gaps = 74/311 (23%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSY 408
++ Y ++Y D+ G D +H+ + G EGRD + F + Y
Sbjct: 51 DAAMAAPFFDPAFYRSAYPDVAAG-GGDPL---RHYLDHGWLEGRDPSAVFSTLFYADR- 105
Query: 409 DDLRNVFGSDRGAAARHYITHGVKE-----GRNPDAFKALEYIASHEDLIN---AFADAP 460
+ HY E + F AL+ A
Sbjct: 106 ----HFADRAPINPLLHYAGLSPTERLRVATQPGPDFPALQAGVVEPYFDAPYYARLAGL 161
Query: 461 DLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
+ + H+ G G F YL + +R + + H+ +
Sbjct: 162 EGGEDPLAHYLTKGWRRGLDPNDAFSGDAYLQRHAHMRRLG----VSPLYHFAATRRLQA 217
Query: 519 RNP--------------------------------DAFKALEYIASHEDLINAFADAPDL 546
AF Y+ ++ D+ + P
Sbjct: 218 SEAAAPPARRAKPQAALLPADPAEASDAQIYETVAAAFDREHYLDTNPDIRRS-GIDP-- 274
Query: 547 VQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
HF +FG E R S F+ Y Y G+ HY+ GRA
Sbjct: 275 ----VRHFLDFGAREDRDPSPDFSVRFYRKHY---RREIGAG-VNPFFHYL----AVGRA 322
Query: 605 LGISGMQFKSV 615
G F
Sbjct: 323 RGFRPTPFGLG 333
>gi|294139717|ref|YP_003555695.1| RTX toxin [Shewanella violacea DSS12]
gi|293326186|dbj|BAJ00917.1| RTX toxin, putative [Shewanella violacea DSS12]
Length = 2267
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 65/531 (12%), Positives = 128/531 (24%), Gaps = 78/531 (14%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKG--TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
D+ G G T N G+ G Y+
Sbjct: 1384 GGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSTTNKDTLV 1443
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK--- 208
N S + + A + M + + ++ +Y
Sbjct: 1444 FGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQL--ESFEFADGTVYSRED 1501
Query: 209 ----IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ V+ K + ++ G D + + +D + G + +
Sbjct: 1502 MLSLLPVESKGTDANDSLTGYTGTDTMYGGAGNDTLSSVD----GDDKLYGEAGDDKLTA 1557
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++ + G GND + G +++ +GNDV G G D F + + ++ +
Sbjct: 1558 GNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTS 1617
Query: 325 II------------------------VYDANEHKQDFLS----------DVERLRFADQC 350
+ D +S +E FAD
Sbjct: 1618 TTNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFEFADGT 1677
Query: 351 I---------------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + A + L V G D +
Sbjct: 1678 VYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKL 1737
Query: 390 GLSEGRDITFDSYL---YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY- 445
G D F G Y D G+ Y G +Y
Sbjct: 1738 TAGNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYD 1797
Query: 446 -IASHEDLINAFAD---APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
A+++D + A+ A + + ++ ++ Y F
Sbjct: 1798 TSATNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFEFAD 1857
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ ++ E + DA +L + + + G D
Sbjct: 1858 GTVYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDD 1908
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 55/400 (13%), Positives = 92/400 (23%), Gaps = 71/400 (17%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTE--------SWSSIGGYEKNMTIAQHTVIESVVGSS 275
S GDD + +I N I G + + + +VG
Sbjct: 781 GSDGDDTIRARSGSNSGVFILANNGNDRVFGANGDDYIDGGSGDDYLYGSNGHDQLVGGE 840
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND++ G + ++V +GNDV G G D F + + ++ + D
Sbjct: 841 GNDILDGGNGDDVLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSTTNKDTLAFGA 900
Query: 336 DFLSD----------------------------------VERLRFADQCI---------- 351
+ +E FAD +
Sbjct: 901 NISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFEFADGTVYSREDMLSLL 960
Query: 352 -----------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ A + L V G D + G D F
Sbjct: 961 PVESKGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKLTAGNGVDQLFG 1020
Query: 401 SYL---YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
G Y D G+ Y G +Y S +
Sbjct: 1021 GEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSTTNKDTLVF 1080
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDS-----YLYLGSYDDLRNVFGSDRGAAARHYIT 512
A + S + D + Y F + ++
Sbjct: 1081 GANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFEFADGTVYSREDMLS 1140
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
E + DA +L + + + G D
Sbjct: 1141 LLPVESKGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDD 1180
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 65/531 (12%), Positives = 121/531 (22%), Gaps = 78/531 (14%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKG--TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
D+ G G T N G+ G Y+
Sbjct: 1020 GGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSTTNKDTLV 1079
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK--- 208
N S + + A + M + + ++ +Y
Sbjct: 1080 FGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQL--ESFEFADGTVYSRED 1137
Query: 209 ----IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ V+ K + ++ G D + + +D + G + +
Sbjct: 1138 MLSLLPVESKGTDANDSLTGYTGTDTMYGGAGNDTLSSVD----GDDKLYGEAGDDKLTA 1193
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++ + G GND + G +++ +GNDV G G D F + + ++ +
Sbjct: 1194 GNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTS 1253
Query: 325 II------------------------VYDANEHKQDFLS----------DVERLRFADQC 350
+ D +S +E FAD
Sbjct: 1254 TTNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFEFADGT 1313
Query: 351 I---------------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + A + L V G D +
Sbjct: 1314 VYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKL 1373
Query: 390 GLSEGRDITFDSYL---YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G D F G Y D G+ Y G +Y
Sbjct: 1374 TAGNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYD 1433
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS-----YLYLGSYDDLRNVFGS 501
S + A + S + D + Y F
Sbjct: 1434 TSTTNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFEFAD 1493
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ ++ E + DA +L + + + G D
Sbjct: 1494 GTVYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDD 1544
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 55/419 (13%), Positives = 106/419 (25%), Gaps = 61/419 (14%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKG--TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
D+ G G T N G+ G Y+
Sbjct: 1748 GGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSATNKDTLV 1807
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK--- 208
N S + + A + M + + ++ +Y
Sbjct: 1808 FGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQL--ESFEFADGTVYSRED 1865
Query: 209 ----IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ V+ K + ++ G D + + +D + G + +
Sbjct: 1866 MLSLLPVESKGTDANDSLTGYTGTDTMYGGAGNDTLSSVD----GDDKLYGEAGDDKLTA 1921
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-- 322
++ + G GND + G +++ +GNDV G G D F + + ++
Sbjct: 1922 GNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTS 1981
Query: 323 ------------------------NAIIVYDANEHKQDFLSD--------VERLRFADQC 350
N+++V A Q + + +E FAD
Sbjct: 1982 ATNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFEFADGT 2041
Query: 351 I---DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ + + + T + + L G D +G D LY +
Sbjct: 2042 VYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYGGAGNDTLSSVDG-----DDKLYGEA 2096
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
DD + G L A ++ L G
Sbjct: 2097 GDDKLTAGNGVDQL----FGGEGNDTLDGGYGDDLLSGGAGNDTLNAGGGSDIYQFGSG 2151
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 66/552 (11%), Positives = 120/552 (21%), Gaps = 82/552 (14%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG--TILSHNALHEIGHAL 132
+ + + DV G G T N G+
Sbjct: 819 DGGSGDDYLYGSNGHDQLVGGEGNDILDGGNGDDVLSGGAGNDVLTGGYGNDRFLFGYGD 878
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G Y+ N S + + A + M + +
Sbjct: 879 GQDTLSDYDTSTTNKDTLAFGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRY 938
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
++ +Y E P +S G D D +L G +
Sbjct: 939 QL--ESFEFADGTVYSREDMLSLLP-----VESKGTDAND-SLTGYTGTDTMYGGAGNDT 990
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL-------- 304
+ + + + + + +G D + G N+ G+D+ G +G
Sbjct: 991 LSSVDGDDKLYGEAGDDKLTAGNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYG 1050
Query: 305 -------------------------DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
DT + A + + ++ + D +S
Sbjct: 1051 NDRFLFGYGDGQDTLSDYDTSTTNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQIS 1110
Query: 340 ----------DVERLRFADQCI---------------------DSVNVKQRSILEYTASY 368
+E FAD + + A
Sbjct: 1111 IMNWFVSSRYQLESFEFADGTVYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYGGAGN 1170
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL---YLGSYDDLRNVFGSDRGAAARH 425
+ L V G D + G D F G Y D G+
Sbjct: 1171 DTLSSVDGDDKLYGEAGDDKLTAGNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGG 1230
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
Y G +Y S + A + S + D
Sbjct: 1231 YGNDRFLFGYGDGQDTLSDYDTSTTNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQ 1290
Query: 486 -----YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
+ Y F + ++ E + DA +L + +
Sbjct: 1291 ISIMNWFVSSRYQLESFEFADGTVYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYGGA 1350
Query: 541 ADAPDLVQAGKD 552
+ G D
Sbjct: 1351 GNDTLSSVDGDD 1362
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 66/507 (13%), Positives = 136/507 (26%), Gaps = 40/507 (7%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D G G T+ S + ++ G + NG ++G + +
Sbjct: 1330 GTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKLTAGNGVDQLFGGEGND 1389
Query: 154 ENDSFL-TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D ++S D + D Y + ++ +
Sbjct: 1390 TLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSTTNKDTLVFGANIS 1449
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
D +++ + L + L G +N S E ++
Sbjct: 1450 IADVTLVKS------GNSLVVQLAGSTDQISIMNWFVSSRYQLESFEFADGTVYSREDML 1503
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ G AN+ +G D G +G DT + K+Y +A +
Sbjct: 1504 SLLPVES-KGTDANDSLTGYTGTDTMYGGAGNDTL--SSVDGDDKLYG--------EAGD 1552
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFG 390
K + V++L + +L A + L G D +F
Sbjct: 1553 DKLTAGNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLS 1612
Query: 391 LSEGRDITFDSYLYLGS------------YDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ D+ ++ + + + GS + ++ + + +
Sbjct: 1613 DYDTSTTNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFE 1672
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
Y + ++ G D+ + D L
Sbjct: 1673 FADGTVYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYG-GAGNDTLSSVDGDDKLYGE 1731
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
G D+ A +GV + + L+ + L + G D F FG
Sbjct: 1732 AGDDKLTA-----GNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFL-FG 1785
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGS 585
Y +G+ + D + D +
Sbjct: 1786 YGDGQDTLSDYDT-SATNKDTLVFGAN 1811
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 64/484 (13%), Positives = 130/484 (26%), Gaps = 39/484 (8%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D G G T+ S + ++ G + NG ++G + +
Sbjct: 966 GTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKLTAGNGVDQLFGGEGND 1025
Query: 154 ENDSFL-TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D ++S D + D Y + ++ +
Sbjct: 1026 TLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSTTNKDTLVFGANIS 1085
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
D +++ + L + L G +N S E ++
Sbjct: 1086 IADVTLVKS------GNSLVVQLAGSTDQISIMNWFVSSRYQLESFEFADGTVYSREDML 1139
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ G AN+ +G D G +G DT + K+Y +A +
Sbjct: 1140 SLLPVES-KGTDANDSLTGYTGTDTMYGGAGNDTL--SSVDGDDKLYG--------EAGD 1188
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFG 390
K + V++L + +L A + L G D +F
Sbjct: 1189 DKLTAGNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLS 1248
Query: 391 LSEGRDITFDSYLYLGS------------YDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ D+ ++ + + + GS + ++ + + +
Sbjct: 1249 DYDTSTTNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFE 1308
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
Y + ++ G D+ + D L
Sbjct: 1309 FADGTVYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYG-GAGNDTLSSVDGDDKLYGE 1367
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
G D+ A +GV + + L+ + L + G D F FG
Sbjct: 1368 AGDDKLTA-----GNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFL-FG 1421
Query: 559 YEEG 562
Y +G
Sbjct: 1422 YGDG 1425
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 64/484 (13%), Positives = 130/484 (26%), Gaps = 39/484 (8%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D G G T+ S + ++ G + NG ++G + +
Sbjct: 1148 GTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKLTAGNGVDQLFGGEGND 1207
Query: 154 ENDSFL-TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D ++S D + D Y + ++ +
Sbjct: 1208 TLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSTTNKDTLVFGANIS 1267
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
D +++ + L + L G +N S E ++
Sbjct: 1268 IADVTLVKS------GNSLVVQLAGSTDQISIMNWFVSSRYQLESFEFADGTVYSREDML 1321
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ G AN+ +G D G +G DT + K+Y +A +
Sbjct: 1322 SLLPVES-KGTDANDSLTGYTGTDTMYGGAGNDTL--SSVDGDDKLYG--------EAGD 1370
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFG 390
K + V++L + +L A + L G D +F
Sbjct: 1371 DKLTAGNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLS 1430
Query: 391 LSEGRDITFDSYLYLGS------------YDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ D+ ++ + + + GS + ++ + + +
Sbjct: 1431 DYDTSTTNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFE 1490
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
Y + ++ G D+ + D L
Sbjct: 1491 FADGTVYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYG-GAGNDTLSSVDGDDKLYGE 1549
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
G D+ A +GV + + L+ + L + G D F FG
Sbjct: 1550 AGDDKLTA-----GNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFL-FG 1603
Query: 559 YEEG 562
Y +G
Sbjct: 1604 YGDG 1607
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 66/507 (13%), Positives = 136/507 (26%), Gaps = 40/507 (7%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D G G T+ S + ++ G + NG ++G + +
Sbjct: 1512 GTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKLTAGNGVDQLFGGEGND 1571
Query: 154 ENDSFL-TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D ++S D + D Y + ++ +
Sbjct: 1572 TLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSTTNKDTLVFGANIS 1631
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
D +++ + L + L G +N S E ++
Sbjct: 1632 IADVTLVKS------GNSLVVQLAGSTDQISIMNWFVSSRYQLESFEFADGTVYSREDML 1685
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ G AN+ +G D G +G DT + K+Y +A +
Sbjct: 1686 SLLPVES-KGTDANDSLTGYTGTDTMYGGAGNDTL--SSVDGDDKLYG--------EAGD 1734
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFG 390
K + V++L + +L A + L G D +F
Sbjct: 1735 DKLTAGNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLS 1794
Query: 391 LSEGRDITFDSYLYLGS------------YDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ D+ ++ + + + GS + ++ + + +
Sbjct: 1795 DYDTSATNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFE 1854
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
Y + ++ G D+ + D L
Sbjct: 1855 FADGTVYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYG-GAGNDTLSSVDGDDKLYGE 1913
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
G D+ A +GV + + L+ + L + G D F FG
Sbjct: 1914 AGDDKLTA-----GNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFL-FG 1967
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGS 585
Y +G+ + D + D +
Sbjct: 1968 YGDGQDTLSDYDT-SATNKDTLVFGAN 1993
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 65/533 (12%), Positives = 124/533 (23%), Gaps = 82/533 (15%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKG--TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
D+ G G T N G+ G Y+
Sbjct: 1566 GGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSTTNKDTLV 1625
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
N S + + A + M + + ++ +Y E
Sbjct: 1626 FGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQL--ESFEFADGTVYSRED 1683
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
P +S G D D +L G ++ + + + + +
Sbjct: 1684 MLSLLP-----VESKGTDAND-SLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKL 1737
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL--------------------------- 304
+G D + G N+ G+D+ G +G
Sbjct: 1738 TAGNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYD 1797
Query: 305 ------DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----------DVERLRFAD 348
DT + A + + ++ + D +S +E FAD
Sbjct: 1798 TSATNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFEFAD 1857
Query: 349 QCI---------------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + A + L V G D
Sbjct: 1858 GTVYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDD 1917
Query: 388 EFGLSEGRDITFDSYL---YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ G D F G Y D G+ Y G +
Sbjct: 1918 KLTAGNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSD 1977
Query: 445 Y--IASHEDLINAFAD---APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
Y A+++D + A+ A + + ++ ++ Y F
Sbjct: 1978 YDTSATNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFEF 2037
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ ++ E + DA +L + + + G D
Sbjct: 2038 ADGTVYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDD 2090
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 65/533 (12%), Positives = 117/533 (21%), Gaps = 82/533 (15%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKG--TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
D+ G G T N G+ G Y+
Sbjct: 1202 GGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSTTNKDTLV 1261
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
N S + + A + M + + ++ +Y E
Sbjct: 1262 FGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQL--ESFEFADGTVYSRED 1319
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
P +S G D D +L G ++ + + + + +
Sbjct: 1320 MLSLLP-----VESKGTDAND-SLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKL 1373
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL--------------------------- 304
+G D + G N+ G+D+ G +G
Sbjct: 1374 TAGNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYD 1433
Query: 305 ------DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----------DVERLRFAD 348
DT + A + + ++ + D +S +E FAD
Sbjct: 1434 TSTTNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFEFAD 1493
Query: 349 QCI---------------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + A + L V G D
Sbjct: 1494 GTVYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDD 1553
Query: 388 EFGLSEGRDITFDSYL---YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ G D F G Y D G+ Y G +
Sbjct: 1554 KLTAGNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSD 1613
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS-----YLYLGSYDDLRNVF 499
Y S + A + S + D + Y F
Sbjct: 1614 YDTSTTNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFEF 1673
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ ++ E + DA +L + + + G D
Sbjct: 1674 ADGTVYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDD 1726
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 67/507 (13%), Positives = 129/507 (25%), Gaps = 39/507 (7%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
EE + + N D + G + N I
Sbjct: 761 EEITEAQLATELEGNKIAATGSDGDDTIRARSGSNSGVFILANNGNDRVFGANGDDYIDG 820
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFL-TSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
G + NG + G + + D V+S D + D
Sbjct: 821 GSGDDYLYGSNGHDQLVGGEGNDILDGGNGDDVLSGGAGNDVLTGGYGNDRFLFGYGDGQ 880
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
Y + + + D +++ + L + L G +N
Sbjct: 881 DTLSDYDTSTTNKDTLAFGANISIADVTLVKS------GNSLVVQLAGSTDQISIMNWFV 934
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S E ++ + G AN+ +G D G +G DT
Sbjct: 935 SSRYQLESFEFADGTVYSREDMLSLLPVES-KGTDANDSLTGYTGTDTMYGGAGNDTL-- 991
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ K+Y +A + K + V++L + +L A +
Sbjct: 992 SSVDGDDKLYG--------EAGDDKLTAGNGVDQLFGGEGNDTLDGGYGDDLLSGGAGND 1043
Query: 370 DLIQVIGQD--VFESMKHFYEFGLSEGRDITFDSYLYLGS------------YDDLRNVF 415
L G D +F + D+ ++ + + +
Sbjct: 1044 VLTGGYGNDRFLFGYGDGQDTLSDYDTSTTNKDTLVFGANISIADVTLVKSGNSLVVQLA 1103
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
GS + ++ + + + Y + ++
Sbjct: 1104 GSTDQISIMNWFVSSRYQLESFEFADGTVYSREDMLSLLPVESKGTDANDSLTGYTGTDT 1163
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
G D+ + D L G D+ A +GV + + L+ +
Sbjct: 1164 MYG-GAGNDTLSSVDGDDKLYGEAGDDKLTA-----GNGVDQLFGGEGNDTLDGGYGDDL 1217
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEG 562
L + G D F FGY +G
Sbjct: 1218 LSGGAGNDVLTGGYGNDRFL-FGYGDG 1243
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/288 (13%), Positives = 83/288 (28%), Gaps = 20/288 (6%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKG--TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
D+ G G T N G+ G Y+
Sbjct: 1930 GGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSATNKDTLV 1989
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK--- 208
N S + + A + M + + ++ +Y
Sbjct: 1990 FGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQL--ESFEFADGTVYSRED 2047
Query: 209 ----IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ V+ K + ++ G D + + +D + G + +
Sbjct: 2048 MLSLLPVESKGTDANDSLTGYTGTDTMYGGAGNDTLSSVD----GDDKLYGEAGDDKLTA 2103
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++ + G GND + G +++ +GND + G D + + + S I ++++
Sbjct: 2104 GNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDTLNAGGGSDIYQFGSGSGQDIINNYDSS 2163
Query: 325 IIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQ-RSILEYTASYED 370
D +E L F+ D +N+ +E Y D
Sbjct: 2164 SSSIDVARFDD---VSIEDLWFSRDGNNLQINIIGTDDQVEVNNWYND 2208
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 59/476 (12%), Positives = 125/476 (26%), Gaps = 38/476 (7%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D G G T+ S + ++ G + NG ++G + +
Sbjct: 1694 GTDANDSLTGYTGTDTMYGGAGNDTLSSVDGDDKLYGEAGDDKLTAGNGVDQLFGGEGND 1753
Query: 154 ENDSFL-TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D ++S D + D Y + ++ +
Sbjct: 1754 TLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLSDYDTSATNKDTLVFGANIS 1813
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
D +++ + L + L G +N S E ++
Sbjct: 1814 IADVTLVKS------GNSLVVQLAGSTDQISIMNWFVSSRYQLESFEFADGTVYSREDML 1867
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ G AN+ +G D G +G DT + K+Y +A +
Sbjct: 1868 SLLPVES-KGTDANDSLTGYTGTDTMYGGAGNDTL--SSVDGDDKLYG--------EAGD 1916
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--VFESMKHFYEFG 390
K + V++L + +L A + L G D +F
Sbjct: 1917 DKLTAGNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDVLTGGYGNDRFLFGYGDGQDTLS 1976
Query: 391 LSEGRDITFDSYLYLGS------------YDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ D+ ++ + + + GS + ++ + + +
Sbjct: 1977 DYDTSATNKDTLVFGANISIADVTLVKSGNSLVVQLAGSTDQISIMNWFVSSRYQLESFE 2036
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
Y + ++ G D+ + D L
Sbjct: 2037 FADGTVYSREDMLSLLPVESKGTDANDSLTGYTGTDTMYG-GAGNDTLSSVDGDDKLYGE 2095
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
G D+ A +GV + + L+ + L + G D +
Sbjct: 2096 AGDDKLTA-----GNGVDQLFGGEGNDTLDGGYGDDLLSGGAGNDTLNAGGGSDIY 2146
>gi|163735293|ref|ZP_02142728.1| iron-regulated protein FrpC, putative [Roseobacter litoralis Och
149]
gi|161391507|gb|EDQ15841.1| iron-regulated protein FrpC, putative [Roseobacter litoralis Och
149]
Length = 998
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/349 (14%), Positives = 80/349 (22%), Gaps = 34/349 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ I+ + S + + G TI I LGL
Sbjct: 517 GAGNDTIITGSGNDTVLASSGSDTIFLGDGNDTAT---SSGTDTIFGEAGDDLIFAGLGL 573
Query: 135 MHPGSYNGGYPVYGV---DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G + Y + + + G ++ A
Sbjct: 574 PETLDGGTGVDTLNTTLFNGSYVVNLATGLTNFAGEVFTNFENIISGSGNDELLGTSGAN 633
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD------------------- 232
+ GA + + + G+D +D
Sbjct: 634 EMDGGAGNDRILG--LGGNDELIGGLGSDILNGGDGNDEIDGGDGNDIMYGGTGNDDMDG 691
Query: 233 ----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
LIG N + L G I + G GND + G+ N++
Sbjct: 692 GAGDDLLIGNDGNDVMLGGLGNDMFRGGTGVDNIDGGAGDDEAFGGDGNDTLRGDVGNDL 751
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
S+GND DG G D + + F
Sbjct: 752 LDGSAGNDFIDGEEGNDILV--GQIGNDTLLGGAGLDELRGGGGDDFLNGEAGNDTMFGG 809
Query: 349 QCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
D++ IL+ +DL G D F G D
Sbjct: 810 ANEDTLFGGSGDDILQGNQQNDDLFGQSGNDRLFGGDGFDFLDGGSGND 858
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 58/372 (15%), Positives = 92/372 (24%), Gaps = 34/372 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDD----------LLDLTLIGGVKNYIDLNTESWSSIGGYE 257
S TI+ GDD LD N N ++
Sbjct: 544 GDGNDTATSSGTDTIFGEAGDDLIFAGLGLPETLDGGTGVDTLNTTLFNGSYVVNLATGL 603
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N T E+++ SGND ++G S N +GND G G D
Sbjct: 604 TNFAGEVFTNFENIISGSGNDELLGTSGANEMDGGAGNDRILGLGGNDELI--GGLGSDI 661
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + + + + + D +L + ++ +G
Sbjct: 662 LNGGDGNDEIDGGDGND--------IMYGGTGNDDMDGGAGDDLLIGNDGNDVMLGGLGN 713
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D+F G D F D+ N G
Sbjct: 714 DMFRGGTGVDNIDGGAGDDEAFGGDGNDTLRGDVGNDLLDGSAGNDFIDGEEGNDILVGQ 773
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
L A ++L D + G D E+ F L +
Sbjct: 774 IGNDTLLGGAGLDELRGGGGDDFLNGEAGNDTMFGGANEDTLFGG-SGDDILQGNQQNDD 832
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+FG G D F L+ + ++ L + G D
Sbjct: 833 LFG-----------QSGNDRLFGGDGFDFLDGGSGNDRLEGGNGLDVLVGGLGAD--ILL 879
Query: 558 GYEEGRSITFNP 569
G + FN
Sbjct: 880 GGAQNDIFQFNS 891
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/322 (15%), Positives = 81/322 (25%), Gaps = 36/322 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
F S + A+ G G IL E+ LG
Sbjct: 601 TGLTNFAGEVFTNFENIISGSGNDELLGTSGANEMDGGAGNDRILGLGGNDELIGGLGSD 660
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+G + G D + +M D M + + V + +
Sbjct: 661 ILNGGDGNDEIDGGDGN--------DIMYGGTGNDDMDGGAGDDLLIGNDGNDVMLGGL- 711
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ + I GDD GG N + G
Sbjct: 712 -------------GNDMFRGGTGVDNIDGGAGDD----EAFGGDGNDTLRGDVGNDLLDG 754
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N I + +VG GND ++G + + G+D +G +G DT F +
Sbjct: 755 SAGNDFIDGEEGNDILVGQIGNDTLLGGAGLDELRGGGGDDFLNGEAGNDTMF--GGANE 812
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
++ I+ ++ L L+ + + L
Sbjct: 813 DTLFGGSGDDILQGNQQND--------DLFGQSGNDRLFGGDGFDFLDGGSGNDRLEGGN 864
Query: 376 GQDVFESMKHFYEFGLSEGRDI 397
G DV DI
Sbjct: 865 GLDVLVGGLGADILLGGAQNDI 886
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 70/237 (29%), Gaps = 17/237 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D I + + I D DV G+G + I G
Sbjct: 672 DGGDGNDIMYGGTGNDDMDGGAGDDLLIGNDGNDVMLGGLGNDMFRGGTGVDNIDGGAGD 731
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G + G D ND S + F+ + D G + + ++
Sbjct: 732 DEAFGGDGNDTLRG---DVGNDLLDGSAGNDFIDGEEGNDILVGQIGNDTLLGGAGLDEL 788
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + T++ +D L GG + I + +
Sbjct: 789 RGG----------GGDDFLNGEAGNDTMFGGANEDTL----FGGSGDDILQGNQQNDDLF 834
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G N + + + G SGND + G + +V G D+ G + D F + +
Sbjct: 835 GQSGNDRLFGGDGFDFLDGGSGNDRLEGGNGLDVLVGGLGADILLGGAQNDIFQFNS 891
Score = 44.8 bits (104), Expect = 0.053, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 68/308 (22%), Gaps = 41/308 (13%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L + ++ G N I+ E G + + GN N + +G D
Sbjct: 403 LAGAGFKTVLGQGGNDIISSSGAGEYFGGGGNDRITAGNGTNELLNGGAGIDTLI----- 457
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
T + + + N + N + + + ++
Sbjct: 458 -TTTFNFDYEINMVSGVTNFVGESFINFENIIMGNGNDTVVGTSGSNGIETGAGNDSVDG 516
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
A + +I G D + L +G D S D D A
Sbjct: 517 GAGNDTIITGSGNDTVLASSGSDTIFLGDGNDTATS------SGTDTIFGEAGDDLIFAG 570
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ + G D + S+ + G +
Sbjct: 571 LGLPETLDGGTGVDTLNTTLFNGSYVVNLATGLTNFAGEVFTNFENIISGSGNDELLG-- 628
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
T G E + + +++LI
Sbjct: 629 ---------------------------TSGANEMDGGAGNDRILGLGGNDELIGGLGSDI 661
Query: 545 DLVQAGKD 552
G D
Sbjct: 662 LNGGDGND 669
>gi|323138326|ref|ZP_08073397.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
gi|322396409|gb|EFX98939.1| glycosyl transferase family 2 [Methylocystis sp. ATCC 49242]
Length = 1339
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/320 (18%), Positives = 88/320 (27%), Gaps = 83/320 (25%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
S Y + L I + HF G ++G + FD YL L
Sbjct: 69 LFSTAYYLRIHAALQGTIRDPLV----HFVTRGWTDGFNPYPLFDDEFYLPQLPAL---- 120
Query: 416 GSDRGAAARHYITHGVKEG-RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
D HY+ +G ++ + +F +Y+ E+ NA + + G
Sbjct: 121 --DGLDPLTHYVANGWRQDLKAIPSFDPGDYVEHCEEQRNADVEPLAHFLTNRVQRRLRG 178
Query: 475 CEEGRFVT----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG----VKEGRNP----- 521
G F FD L S D D A + G E
Sbjct: 179 SWNGEFGLTQLEFDRIQLLESEFDNIGSPDGDDAAVPITHTESGSNPCKSEALQSHVPRP 238
Query: 522 -----------------------------DAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+F Y+ + D+ A VQ+G
Sbjct: 239 DVLAPQENQVAAPNTQTETPDHQSPVECDGSFDEELYLLCNPDVAQAI--ERGAVQSGWA 296
Query: 553 HFSNFGYEEGRSIT--------------------------FNPDLYLTSYDDLWNVFGSD 586
H+ + G EGR F+ Y YDD+ G D
Sbjct: 297 HWLSSGKSEGRDENPTICKDNLYGITPVRSNPDYDVVTRNFDAVEYSLIYDDIARALGFD 356
Query: 587 RSAAAQHYITHGMKEGRALG 606
+ QH+I G EGR
Sbjct: 357 QERCRQHWIAAGRHEGRYGP 376
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 41/121 (33%), Gaps = 21/121 (17%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ Y + D+ A HYI G ++ R+ F Y+ H L
Sbjct: 33 FDAVWYRMANSDVAP-----DDATILHYIREGRRQLRSQHPLFSTAYYLRIHAALQGTIR 87
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
D HF G+ +G + F+ + YL D HY+ +G
Sbjct: 88 DP-------LVHFVTRGWTDGFNPYPLFDDEFYLPQLP------ALDGLDPLTHYVANGW 134
Query: 600 K 600
+
Sbjct: 135 R 135
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 46/137 (33%), Gaps = 22/137 (16%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
+ FD+ Y + D+ A HYI G ++ R+ F Y+ H L
Sbjct: 31 LLFDAVWYRMANSDVAPD-----DATILHYIREGRRQLRSQHPLFSTAYYLRIHAALQGT 85
Query: 456 FADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
D HF G +G + FD YL L D HY+ +
Sbjct: 86 IRDP-------LVHFVTRGWTDGFNPYPLFDDEFYLPQLPAL------DGLDPLTHYVAN 132
Query: 514 GVKEGR-NPDAFKALEY 529
G ++ +F +Y
Sbjct: 133 GWRQDLKAIPSFDPGDY 149
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 15/94 (15%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS--ITFNPDLYLTSYDDLWN 581
F A+ Y ++ D+ A H+ G + RS F+ YL +
Sbjct: 33 FDAVWYRMANSDVAPDD--------ATILHYIREGRRQLRSQHPLFSTAYYLRIHA---- 80
Query: 582 VFGSDRSAAAQHYITHGMKEGRA-LGISGMQFKS 614
H++T G +G + +F
Sbjct: 81 ALQGTIRDPLVHFVTRGWTDGFNPYPLFDDEFYL 114
Score = 45.5 bits (106), Expect = 0.026, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 33/107 (30%), Gaps = 26/107 (24%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----------------- 397
+ L + + + V H+ G SEGRD
Sbjct: 267 DGSFDEELYLLCNPDVAQAIERGAVQSGWAHWLSSGKSEGRDENPTICKDNLYGITPVRS 326
Query: 398 ---------TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
FD+ Y YDD+ G D+ +H+I G EGR
Sbjct: 327 NPDYDVVTRNFDAVEYSLIYDDIARALGFDQERCRQHWIAAGRHEGR 373
>gi|256830193|ref|YP_003158921.1| hemolysin-type calcium-binding protein [Desulfomicrobium baculatum
DSM 4028]
gi|256579369|gb|ACU90505.1| Hemolysin-type calcium-binding region [Desulfomicrobium baculatum
DSM 4028]
Length = 1884
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/505 (14%), Positives = 135/505 (26%), Gaps = 33/505 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D S + + D G G T + + L L
Sbjct: 329 DGGDGNDTMSGGVGKILLLGGDGNDLLYGWVGVDTLDGGAGIDTADYFCSDAAVRVDLNL 388
Query: 135 MHPGSYNGGYPVYGVD---------NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
S ND + +V+S DS++ S +
Sbjct: 389 TTAQSGGDAEGDLLTGIENLTGSDFNDTLIGNGQNNVLSGLSGNDSLVGGSGNNSLSGGD 448
Query: 186 SDIV--------AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
D + + G S ++ ++V QT GG LL+
Sbjct: 449 GDDILRGGVHGDTLDGGAGVDTVSYESSGLGVDVDLNRQGGGQTQPGVGGPGLLNDAKDD 508
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQH-TVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ +L ++ + N + +++ G G+D + G + + +G D
Sbjct: 509 VLTGIENLTGSNYGDKLTGDGNDNVLSGLNAADTLYGGGGDDSLYGGAGFDFLMGGAGAD 568
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ DG + DT Y A I + + D L +ER+ ++ +
Sbjct: 569 LLDGGTYTDTASYSASDAAVNIDLRRAGAQ--SGGDAQGDTLVGIERVIGSNHNDTIIGS 626
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDL 411
L +D+ G D + + G ++ D G+ D L
Sbjct: 627 NGTDYLYGMDGNDDVRAAYGNDTLDGGAGADTLWGATGTNLLLGGDGDDKLYGQGNNDTL 686
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
G+D T + + + A LV + + S
Sbjct: 687 AGGAGADLLDG----GTETDTADYSASSAAVNIDLRRAGTQSGGDAQGDTLVSIERVIGS 742
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR----GAAARHYITHGVKEGRNPDAFKAL 527
N D + DD+R +G D Y D +L
Sbjct: 743 NHNDTIIGSNGTDYLYGMDGNDDVRAAYGDDTLDGGAGTDTLYGGRDKNLLLGGDGDDSL 802
Query: 528 EYIASHEDLINAFADAPDLVQAGKD 552
++++ L+ D
Sbjct: 803 YGASNNDTLVGGAGADLLDGGTETD 827
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 57/395 (14%), Positives = 106/395 (26%), Gaps = 58/395 (14%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM--------- 260
+ G+D L GG N L+ S+ G N
Sbjct: 269 NDILYGGDGDDLMSGYAGNDTL----YGGAGNDFLLSGGGNDSLSGGAGNDILGGSTASG 324
Query: 261 --TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
T+ +++ G G +++G N++ + G D DG +G+DT Y+ ++
Sbjct: 325 DCTLDGGDGNDTMSGGVGKILLLGGDGNDLLYGWVGVDTLDGGAGIDTADYFCSDAAVRV 384
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
N + + D L+ +E L +D + Q ++L + + L+ G +
Sbjct: 385 DL--NLTTAQSGGDAEGDLLTGIENLTGSDFNDTLIGNGQNNVLSGLSGNDSLVGGSGNN 442
Query: 379 VFESMK---------HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
H G D LG DL G
Sbjct: 443 SLSGGDGDDILRGGVHGDTLDGGAGVDTVSYESSGLGVDVDLNRQGGGQTQPGVGGPGLL 502
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT------- 482
+ + L + L D D G ++ +
Sbjct: 503 NDAKDDVLTGIENLTGSNYGDKLTGDGNDNVLSGLNAADTLYGGGGDDSLYGGAGFDFLM 562
Query: 483 -------------FDSYLYLGSYDDLR------------NVFGSDRGAAARHYITHGVKE 517
D+ Y S + + G R ++
Sbjct: 563 GGAGADLLDGGTYTDTASYSASDAAVNIDLRRAGAQSGGDAQGDTLVGIERVIGSNHNDT 622
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ L + ++D+ A+ + AG D
Sbjct: 623 IIGSNGTDYLYGMDGNDDVRAAYGNDTLDGGAGAD 657
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 69/454 (15%), Positives = 116/454 (25%), Gaps = 54/454 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL-- 132
S+ + + +G I AD+ G G T + + L
Sbjct: 1288 TGSNHNDVLTGDGRANVLYGGDGNDQLIGGAGADLLNGGAGNDTADYSTSSAAVNIDLRR 1347
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM---VSDIV 189
G G + G++ ++ T + S MD + A +
Sbjct: 1348 TGAQSGGDAQGDTLVGIERVIGSNHNDTIIGSNGTDYLYGMDGNDDVRAAYGDDTLDGGA 1407
Query: 190 AVQKIYGAPKGSL------GNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
++GA +L + +Y + D D + N
Sbjct: 1408 GNDSLWGAKDVNLLLGGDGDDKLYGQGNNDTLVGGAGADLLDGGTETDTADYSASSTWVN 1467
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
ID+N + + GG + IE+V GS +D + GN NNV G D G
Sbjct: 1468 -IDMNLATAQTGGGDGNHALGDTLVSIENVTGSQYDDSITGNGWNNVLDGGDGADTLYGG 1526
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF--------------- 346
G DT + +Y A + D L F
Sbjct: 1527 GGHDTL--NGGAGNDSLYGGVEAQYDHLDGGSGNDTLDGGAGNDFLLGGAGNDSLYGGDW 1584
Query: 347 -----------------ADQCIDSVNVKQRSILEYT--ASYEDLIQVIGQDVFESMKHFY 387
+ + L A + L G D + +
Sbjct: 1585 NFVDTLDGGDGDDTLDGGEGRDSLLGGAGNDSLYGGFEAYSDHLYGGSGADTLDGGAGYD 1644
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE----GRNPDAFKAL 443
+G D + D + + G R + G G N L
Sbjct: 1645 FLLGGDGNDSLYGGERNFSDTLDGGDGDDTLDGGYGRDSLLGGAGNDFLYGGNESWNDTL 1704
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ A ++ L + G D +
Sbjct: 1705 DGGAGNDTLDGGAGNDVLYGGGGIDSLFGDAGND 1738
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 76/480 (15%), Positives = 120/480 (25%), Gaps = 38/480 (7%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ NG+ D G G +L + + +GG
Sbjct: 878 TGNGWNNVLDGGDGADNLDGGGGRDTLDGGAGNDFLLGGADNDSLYGG-DWNFSDTLDGG 936
Query: 144 YPVYGVDNDYENDSFLTSV---MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+D DS L Y +D G + + GA
Sbjct: 937 DGDDTLDGGAGRDSLLGGAGDDSLYGGDEDFFDTLDGGDGDDTLNGGEAYDSLLGGAGND 996
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY--------IDLNTESWSS 252
SL T+ G DLLD +Y ID+N + +
Sbjct: 997 SLYGGNESWNDTLDGGAGNDTLVGGAGSDLLDGGTETDTADYSASSTWVNIDMNLATEQT 1056
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
GG + IE+V GS +D + GN NNV G D+ DG +G D
Sbjct: 1057 GGGDGNHALGDTLVSIENVTGSQYDDSITGNGWNNVLDGGDGADILDGGAGRDNL--NGG 1114
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + D L ER L+ Y+ L
Sbjct: 1115 AGNDSLDGGAGDDFLLGG--AGNDSLYGGER-------------NFSDTLDGGDGYDTLD 1159
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D ++ L D + G + + +
Sbjct: 1160 GGTGDDSLLGGAGNDSLYGG-----DWNFADTLDGGDGDDTLNGGEAYDSLLGGAGNDFL 1214
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
G N L+ A ++ L+ D + V +
Sbjct: 1215 YGGNESWNDTLDGGAGNDILVGGAGADVLDGGTETDTADYSASDAAVQVNLNLTTAQTGG 1274
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+V ++ +GR L ++ LI AG D
Sbjct: 1275 HAKGDVLTGIENLTGSNHNDVLTGDGRA----NVLYGGDGNDQLIGGAGADLLNGGAGND 1330
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 65/505 (12%), Positives = 119/505 (23%), Gaps = 63/505 (12%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL--GLMHPGSYNGGYPVYGVDN 151
AD+ G T + + L G G + ++
Sbjct: 679 GQGNNDTLAGGAGADLLDGGTETDTADYSASSAAVNIDLRRAGTQSGGDAQGDTLVSIER 738
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPM---VSDIVAVQKIYGAPKGSL------ 202
++ T + S MD + A + +YG +L
Sbjct: 739 VIGSNHNDTIIGSNGTDYLYGMDGNDDVRAAYGDDTLDGGAGTDTLYGGRDKNLLLGGDG 798
Query: 203 GNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+++Y + D D + N ++L+ + + GG +
Sbjct: 799 DDSLYGASNNDTLVGGAGADLLDGGTETDTADYSASSTWVN-VNLSLSTAQTGGGDGNHA 857
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
IE+V GS +D + GN NNV G D DG G DT + +
Sbjct: 858 LGDTLVSIENVTGSQYDDSITGNGWNNVLDGGDGADNLDGGGGRDTL--DGGAGNDFLLG 915
Query: 321 FENAIIVYDA---------------------------NEHKQDFLSDVERLRFADQC--- 350
+ +Y D L + F
Sbjct: 916 GADNDSLYGGDWNFSDTLDGGDGDDTLDGGAGRDSLLGGAGDDSLYGGDEDFFDTLDGGD 975
Query: 351 -----------IDSVNVKQRSILEYT--ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ L + + L G D D
Sbjct: 976 GDDTLNGGEAYDSLLGGAGNDSLYGGNESWNDTLDGGAGNDTLVGGAGSDLLDGGTETDT 1035
Query: 398 TFDSYLYLGSYDDLRNV---FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
S D+ G G A ++ ++ + L
Sbjct: 1036 ADYSASSTWVNIDMNLATEQTGGGDGNHALGDTLVSIENVTGSQYDDSITGNGWNNVLDG 1095
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
G+D+ + + LG + +++G +R + G
Sbjct: 1096 GDGADILDGGAGRDNLNGGAGNDSLDGGAGDDFLLGGAGN-DSLYGGERNFSDTLDGGDG 1154
Query: 515 VKEGRNPDAFKALEYIASHEDLINA 539
+L A ++ L
Sbjct: 1155 YDTLDGGTGDDSLLGGAGNDSLYGG 1179
Score = 42.9 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 33/249 (13%), Positives = 64/249 (25%), Gaps = 19/249 (7%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GGD + GG + + + G N + + + G +GND + G +
Sbjct: 236 GGDGAFSDYMEGGDGDDTLEGGDGGDYMDGGYGNDILYGGDGDDLMSGYAGNDTLYGGAG 295
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N+ GND G +G D S + + +
Sbjct: 296 NDFLLSGGGNDSLSGGAGNDILGGSTASGDCTLDGGDGNDTMSGGV-------------- 341
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
I + +L + L G D + + + ++T
Sbjct: 342 ---GKILLLGGDGNDLLYGWVGVDTLDGGAGIDTADYFC--SDAAVRVDLNLTTAQSGGD 396
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
D L + I +G + + S + ++ L
Sbjct: 397 AEGDLLTGIENLTGSDFNDTLIGNGQNNVLSGLSGNDSLVGGSGNNSLSGGDGDDILRGG 456
Query: 466 GKDHFSNFG 474
+ G
Sbjct: 457 VHGDTLDGG 465
>gi|148241799|ref|YP_001226956.1| hypothetical protein SynRCC307_0700 [Synechococcus sp. RCC307]
gi|147850109|emb|CAK27603.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 404
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 64/334 (19%), Positives = 104/334 (31%), Gaps = 81/334 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKAD 108
+ + ++DL FE + + + + + + + D
Sbjct: 44 AEYKNYMVQTVARLDNIIDLDFE---YTGNYSQSVIDVRLNDSGPFCGQAAAMDGYIELD 100
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
+W G + +HE+GHALGL PG + ++ D + MSY
Sbjct: 101 IWTNGSNS-NDRKNTFIHELGHALGLGEPG----------WNRRWDQDD---TAMSYNKG 146
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPK----------GSLGNNIYKIEVQQ----- 213
GY SDI A+ I+G +L NN+Y +
Sbjct: 147 NV------GGYATWYRSSDINALISIWGRENDHKNQTQRGKANLANNLYGGKGNDKLFGG 200
Query: 214 ------KDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIG------- 254
+++ S G+D + D N I+LNT SW + G
Sbjct: 201 NKSDILSGGNGADSLFASLGNDTINGGSGRDTAQFSSRSNRINLNTTSWQNTGDGRDRLI 260
Query: 255 ------------------------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
G + + + ++G GND + G S N+
Sbjct: 261 SIENVNAGSGNDVVTGNRGANTLKGQNGHDVLNGAAGRDYLIGGRGNDRLKGGSGNDKLL 320
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
GND G G DTF + +I F N
Sbjct: 321 GGQGNDKLWGQGGRDTFVLSEGAGYDRIMDFRNG 354
>gi|17230838|ref|NP_487386.1| hypothetical protein all3346 [Nostoc sp. PCC 7120]
gi|17132441|dbj|BAB75045.1| all3346 [Nostoc sp. PCC 7120]
Length = 1428
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/262 (18%), Positives = 81/262 (30%), Gaps = 13/262 (4%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
+ D G+G T+ + G G YG + +
Sbjct: 552 GTNSPDQLFGGLGNDTLRGFFGNDVLFGEQGDDRFEGGRGNDTFYGGAGNDVFNLEQLQD 611
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI 222
+ D +SD +Q + + Q
Sbjct: 612 NDVVIDFVQGQDKIDIRS--LNISDWATLQLLISNDGQNNALITTFFNGDQSQIKLNNI- 668
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+LL + N ++LN +I G + +++ G GNDV+ G
Sbjct: 669 ----NPNLLQASDFIFNTNTVNLN----QTIDGTNSPDQLFGGLGNDTLRGFFGNDVLFG 720
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN--AIIVYDANEHKQDFLSD 340
++ F +GND F G +G D Y Y++ + AN D L +
Sbjct: 721 EQGDDRFEGGAGNDTFYGGTGNDIAVYLGTRSQYQVTSNGGVFTVTDTVANRDGVDTLRE 780
Query: 341 VERLRFADQCIDSVNVKQRSIL 362
VE+++F+DQ I N L
Sbjct: 781 VEQIQFSDQTITIGNTSPTITL 802
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/359 (13%), Positives = 87/359 (24%), Gaps = 53/359 (14%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
++I +I G + +++ G +GNDV+ G ++ F GND
Sbjct: 118 QASDFIFNTVNLNQTIDGTNFADQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGRGNDT 177
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENA---------------IIVYDANEHKQDFLSDVE 342
F G +G D F + F + + QD
Sbjct: 178 FYGGAGNDVFNLEQQQDNDVVTDFVRGQDKIDLRNLNINDWATLQLLISNDGQDNALITT 237
Query: 343 RLRFADQCID------------------------SVNVKQRSILEYTASYEDLIQVIGQD 378
+ I L + L G D
Sbjct: 238 FFNGSQSQIKLLNINPNLLQASDFIFNTVNLNQTIDGTNFADQLFGGLGNDTLRGFFGND 297
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK---EGR 435
V + F G D Y G+ +D+ N+ ++ K
Sbjct: 298 VLFGEQGDDRFEGGRGNDT-----FYGGAGNDVFNLEQLQDNDVVTDFVRGQDKIDLRNL 352
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
N + + L+ + S++ NA + N + F
Sbjct: 353 NINDWATLQLLISNDGQNNALITTFFNGDQSQIKLLNINPNLLQASDFI------FNTVN 406
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
N + + + G R L + + AG D F
Sbjct: 407 LNQTIDGTNSPDQLFGGLGNDTLRGFFGNDVLFGEQGDDRFEGGRGNDTFYGGAGNDVF 465
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 49/337 (14%), Positives = 83/337 (24%), Gaps = 53/337 (15%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
M I ++++G++GND++ G N+ F GND G +G D F +
Sbjct: 1 MVIRGTNNDDNLIGTTGNDIIEGLGGNDRFEGGRGNDTLTGGTGNDVFNLEQQQDNDVVT 60
Query: 320 RFENA---------------IIVYDANEHKQDFLSDVERLRFADQCID------------ 352
F + + QD + I
Sbjct: 61 DFVRGQDKIDLRNLNINDWATLQLLISNDGQDNALITTFFNGSQSQIKLLNINPNLLQAS 120
Query: 353 ------------SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
L + L G DV + F G D
Sbjct: 121 DFIFNTVNLNQTIDGTNFADQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGRGNDT--- 177
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVK---EGRNPDAFKALEYIASHEDLINAFA 457
Y G+ +D+ N+ ++ K N + + L+ + S++ NA
Sbjct: 178 --FYGGAGNDVFNLEQQQDNDVVTDFVRGQDKIDLRNLNINDWATLQLLISNDGQDNALI 235
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ N + F N A + + G
Sbjct: 236 TTFFNGSQSQIKLLNINPNLLQASDFI------FNTVNLNQTIDGTNFADQLFGGLGNDT 289
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
R L + + AG D F
Sbjct: 290 LRGFFGNDVLFGEQGDDRFEGGRGNDTFYGGAGNDVF 326
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 62/492 (12%), Positives = 115/492 (23%), Gaps = 64/492 (13%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
+ AD G+G T+ + G G YG + +
Sbjct: 274 GTNFADQLFGGLGNDTLRGFFGNDVLFGEQGDDRFEGGRGNDTFYGGAGNDVFNLEQLQD 333
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI 222
D ++D +Q + + Q +
Sbjct: 334 NDVVTDFVRGQDKIDLRN--LNINDWATLQLLISNDGQNNALITTFFNGDQSQIKLLN-- 389
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ ++I +I G + +++ G GNDV+ G
Sbjct: 390 ---------INPNLLQASDFIFNTVNLNQTIDGTNSPDQLFGGLGNDTLRGFFGNDVLFG 440
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA------------------ 324
++ F GND F G +G D F + F
Sbjct: 441 EQGDDRFEGGRGNDTFYGGAGNDVFNLEQLQDNDVVTDFVQGQDKIDIRNLNINDWATLQ 500
Query: 325 ------------IIVYDANEHKQDFLSDVE-------RLRFADQCID--SVNVKQRSILE 363
I + + Q L ++ F ++ L
Sbjct: 501 LLISNDGQDNALITTFFNGDQSQIKLLNINPNLLQASDFIFNTVNLNQTIDGTNSPDQLF 560
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ L G DV + F G D Y G+ +D+ N+
Sbjct: 561 GGLGNDTLRGFFGNDVLFGEQGDDRFEGGRGNDT-----FYGGAGNDVFNLEQLQDNDVV 615
Query: 424 RHYITHGVKEG---RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
++ K N + L+ + S++ NA + +N +
Sbjct: 616 IDFVQGQDKIDIRSLNISDWATLQLLISNDGQNNALITTFFNGDQSQIKLNNINPNLLQA 675
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
F + N + + + G R L +
Sbjct: 676 SDF----IFNTNTVNLNQTIDGTNSPDQLFGGLGNDTLRGFFGNDVLFGEQGDDRFEGGA 731
Query: 541 ADAPDLVQAGKD 552
+ G D
Sbjct: 732 GNDTFYGGTGND 743
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 24/184 (13%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG---- 254
G GN+ Y T +GG D +D ++L + ++
Sbjct: 1195 SGGAGNDTYAFVANAALGTDTITETATGGIDTIDF-NGSTATVRVNLGVTTSQTVNNNLK 1253
Query: 255 -------------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
G N + + + + G +GND + G + N+ + G+D+ G
Sbjct: 1254 LILSANNVIENATGGTGNDRLTGNALNNILAGGNGNDQLQGLAGNDTLWGGLGDDILTGG 1313
Query: 302 SGLDTF------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
G D + + + + I +F+ ++ + +++ D + S +
Sbjct: 1314 IGQDKYLFQSSGVFSSSLGVDYISQFDVGQDQIVLSKATFNAVTNSAGQALTDFAVVSDD 1373
Query: 356 VKQR 359
Sbjct: 1374 EFVN 1377
>gi|281352125|gb|EFB27709.1| hypothetical protein PANDA_007683 [Ailuropoda melanoleuca]
Length = 565
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 59/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 80 LTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSE 132
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 133 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 192
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 193 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 233
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 234 --FKLPN----DDLQGIQKIYGPPD 252
>gi|254474387|ref|ZP_05087773.1| hypothetical protein RR11_222 [Ruegeria sp. R11]
gi|214028630|gb|EEB69465.1| hypothetical protein RR11_222 [Ruegeria sp. R11]
Length = 670
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 54/208 (25%), Gaps = 16/208 (7%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ D+ + G L + G+E + +S
Sbjct: 430 SPIGGGQGGDVWWGDDSDETVIARAEGSTL----LGRGGHDVLTGHEGEDHLIGGVGRDS 485
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G G D + G + ++ ++G D G +G D + + +
Sbjct: 486 LSGGRGRDYLSGGNGHDQLSGNAGADTLLGQAGSD--VLAGGFGRDLMRGGQGFDTLRAG 543
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D L + R L A ++ L G D +
Sbjct: 544 --AGHDTLKG------GSHGDTLLGGAGRDRLFGEAGHDVLAGGFGADRLAGGRGNDVLS 595
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSD 418
G D+ + + DDL F
Sbjct: 596 GGVGSDVF--VFSRGRNGDDLVKDFADG 621
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 62/219 (28%), Gaps = 15/219 (6%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
N + + + +SG ++ + + S S IGG +
Sbjct: 384 NGTLYASARSDGGLSLYALSESGDWVVIYTSDYSETDGHT-ARINSLSPIGGGQGGDVWW 442
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
E+V+ + ++G ++V G D G G D+ + Y
Sbjct: 443 GDDSDETVIARAEGSTLLGRGGHDVLTGHEGEDHLIGGVGRDSL----SGGRGRDYLSGG 498
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ D L R ++ ++ L G D +
Sbjct: 499 NGHDQLSGNAGADTLLG------QAGSDVLAGGFGRDLMRGGQGFDTLRAGAGHDTLKGG 552
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
H GRD F +D L FG+DR A
Sbjct: 553 SHGDTLLGGAGRDRLFGEAG----HDVLAGGFGADRLAG 587
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 58/176 (32%), Gaps = 8/176 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
Q + T+ G D+L GG + + + ++ + T+ +
Sbjct: 500 GHDQLSGNAGADTLLGQAGSDVL----AGGFGRDLMRGGQGFDTLRAGAGHDTLKGGSHG 555
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G +G D + G + ++V G D G G D S ++ R N +
Sbjct: 556 DTLLGGAGRDRLFGEAGHDVLAGGFGADRLAGGRGNDVLSGGVGSDVFVFSRGRNGDDLV 615
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D L S+ + A +++ + D+ +S
Sbjct: 616 KDFADGLDRLQ----FTGQSMADLSIEQQGDGARISWAGGSVVLEGVDADLLDSGD 667
>gi|224077434|ref|XP_002187137.1| PREDICTED: similar to matrix metalloproteinase 24 preproprotein
(predicted) [Taeniopygia guttata]
Length = 596
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 47/161 (29%), Gaps = 30/161 (18%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D + R A W +V LTFEE H
Sbjct: 109 LTGQKWRQRHITYSVHNYTPKVGEID-------TRRAIRQAFDVWQRVTPLTFEEVPYHE 161
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + D+
Sbjct: 162 IKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNSN 221
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 222 HDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 262
>gi|71733215|ref|YP_273694.1| poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71553768|gb|AAZ32979.1| Poly(beta-D-mannuronate) C5 epimerase 3 (Mannuronanepimerase 3)
[Pseudomonas syringae pv. phaseolicola 1448A]
Length = 1610
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/325 (12%), Positives = 85/325 (26%), Gaps = 12/325 (3%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL +S + + ++ G+S +D ++G++ N+V G D G G
Sbjct: 1201 DLGFRGDASDNNDPAAIFESGQNEGGNIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDG 1260
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L I+ ++++
Sbjct: 1261 NDIYVVDNALDTVTESNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVI 1320
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRG 420
AS L G D+ + + + R + ++ +G D + + S
Sbjct: 1321 TGNASNNVLDGAAGADLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTL 1380
Query: 421 AAARH---YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH-FSNFGCE 476
A G + A + +
Sbjct: 1381 GANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTS 1440
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ L ++L +D ++ L A + L
Sbjct: 1441 AQQATGGSGLDTLKGTENLTGSQFADTLTGNKNANV-----LNGGSGNDTLSGGAGDDVL 1495
Query: 537 INAFADAPDLVQAGKDHFSNFGYEE 561
I + G D + E
Sbjct: 1496 IGGSGADTLIGGTGADRYVFNNSNE 1520
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 81/287 (28%), Gaps = 14/287 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTL-------IGGVKNYIDLNTESWSSIGGYEKNMT 261
+ G+D+ + + +D S S G
Sbjct: 1242 GNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTVVSSVSWQLGANVENL 1301
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + G++ +V+ GN++NNV ++G D+ G G D+++ +
Sbjct: 1302 LLTGVSAINGTGNALKNVITGNASNNVLDGAAGADLLTGGDGSDSYYVDDAADRVVETNA 1361
Query: 322 E---NAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ I ++ +++E + ++ +++ A + G
Sbjct: 1362 DQQVGGIDTVLSSLASYTLGANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDGN 1421
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D + F G++ + + D L+ A + N
Sbjct: 1422 DTVSYL--FATAGVTVALNTSAQQATGGSGLDTLKGTENLTGSQFADTLTGNKNANVLNG 1479
Query: 438 DAF-KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ L A + LI + G D + E
Sbjct: 1480 GSGNDTLSGGAGDDVLIGGSGADTLIGGTGADRYVFNNSNETGLGGL 1526
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/293 (15%), Positives = 87/293 (29%), Gaps = 14/293 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E + G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMIFGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ +V D + LS++ ++N+ + L+ T
Sbjct: 447 YRTATTSATDLVTDFDVSQDRIDLSNLGFSGLGSGKGGTLNISYNATLDRTYVKSLDADA 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ I D L G+D G
Sbjct: 507 SGNRFELGLSGNLKDTLNASHFIFQRVIEGTAGGDTLTGTDGNDVMN-----GNAGTDRV 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ A + L + D + N+ + +
Sbjct: 562 NGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNYTASGTKQSDTITDF 614
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 32/72 (44%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G E + ++++G G+D + G++ ++ +G D G G DTF Y A
Sbjct: 793 VLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIINGGAGRDALYGGDGADTFVYSA 852
Query: 312 PSYLYKIYRFEN 323
+ Y+ Y
Sbjct: 853 LTDSYRDYDAGG 864
>gi|320104907|ref|YP_004180498.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC 43644]
gi|319752189|gb|ADV63949.1| Hemolysin-type calcium-binding region [Isosphaera pallida ATCC 43644]
Length = 2233
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 64/225 (28%), Gaps = 17/225 (7%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
P G + IY GDD + N W
Sbjct: 1896 VPDFDAGFVTEPGNDFIRGGEGSDAIYAGAGDDRAFGDGGDDFVDGGAGNDTLW-----G 1950
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+++ + +++ G GND++ G S ++V F +G+D G +G D + +
Sbjct: 1951 GDGVSLFFDS--DTLCGGEGNDLLFGESGDDVLFGRAGDDTLYGGAGQD--YLFGGEGDD 2006
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
++ + + + + D + + A + L G
Sbjct: 2007 FLFGEAGNDTLVGGDGNDV--------ISGGDGNDIAFGGAGDDTIFGNAGNDTLQGGDG 2058
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
D F R I FD L D N+ G
Sbjct: 2059 NDWLIGGDTFNLVHRPRDRSIPFDGDDVLLGEDGFDNLDGGTGNN 2103
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/308 (15%), Positives = 92/308 (29%), Gaps = 10/308 (3%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
T R + ADV G IL + GS +
Sbjct: 1808 AGNNTIRGGGGDDTLLGGQGADVITGEEGDDLILGDADFDIATLTIVPATIGSGDFLDGG 1867
Query: 147 YGVD---NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
G D + +D+ L + + + + D G+ P I + G+
Sbjct: 1868 AGNDRIVGELGDDTILGGLGDDLLGEQFVPDFDAGFVTEPGNDFIRGGEGSDAIYAGAGD 1927
Query: 204 NNIYKIEVQQKDSPF--IQTIYDSGGDDLLDLTLI--GGVKNYIDLNTESWSSIGGYEKN 259
+ + T++ G L + GG N + + G +
Sbjct: 1928 DRAFGDGGDDFVDGGAGNDTLWGGDGVSLFFDSDTLCGGEGNDLLFGESGDDVLFGRAGD 1987
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ + + G G+D + G + N+ GNDV G G D F + I+
Sbjct: 1988 DTLYGGAGQDYLFGGEGDDFLFGEAGNDTLVGGDGNDVISGGDGNDIAF--GGAGDDTIF 2045
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + D L + S+ +L +++L G ++
Sbjct: 2046 GNAGNDTLQGGDGNDWLIGGDTFNLVHRPRD-RSIPFDGDDVLLGEDGFDNLDGGTGNNI 2104
Query: 380 FESMKHFY 387
++ + +
Sbjct: 2105 MDAGRDNF 2112
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 61/429 (14%), Positives = 102/429 (23%), Gaps = 46/429 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
SD+ P D +E N D G G TI I G
Sbjct: 1692 GSDLNDTIFGGAGNNNPVEDGNNTIEGNG-GDDSLVGGAGDDTITGGAGNDLIQGGAGTD 1750
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G ++G +D +++ + +D+ V+ +
Sbjct: 1751 LLDGEAGNDTLWGGLIGVTSDLTDDTLIGGPGNDQLHGTSGNNLIQGDAGNDL--VRGVA 1808
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLNTESWSSI 253
G G + I GDDL+ D + S +
Sbjct: 1809 GNNTIRGG----GGDDTLLGGQGADVITGEEGDDLILGDADFDIATLTIVPATIGSGDFL 1864
Query: 254 GGYEKNMTIAQHTVIESVVG------------SSGNDVVIGNSANNVFFESSGNDVFDGS 301
G N I ++++G + + N+ G+D
Sbjct: 1865 DGGAGNDRIVGELGDDTILGGLGDDLLGEQFVPDFDAGFVTEPGNDFIRGGEGSDAIYAG 1924
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G D F D L + + + +
Sbjct: 1925 AGDDRAFGDGGDDFVDGGAGN-------------DTLWGGDGVSLFFDSDTLCGGEGNDL 1971
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L + + L G D EG D F D L G+D +
Sbjct: 1972 LFGESGDDVLFGRAGDDTLYGGAGQDYLFGGEGDDFLFGEAG----NDTLVGGDGNDVIS 2027
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
G + A ++ L + + G D F+ R +
Sbjct: 2028 -----GGDGNDIAFGGAGDDTIFGNAGNDTLQGGDGNDWLI---GGDTFNLVHRPRDRSI 2079
Query: 482 TFDSYLYLG 490
FD L
Sbjct: 2080 PFDGDDVLL 2088
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 58/392 (14%), Positives = 108/392 (27%), Gaps = 43/392 (10%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYE 257
N + + + ++ GDD + DL G + +D + + GG
Sbjct: 1707 NPVEDGNNTIEGNGGDDSLVGGAGDDTITGGAGNDLIQGGAGTDLLDGEAGNDTLWGGLI 1766
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ ++++G GND + G S NN+ +GND+ G +G +T
Sbjct: 1767 G---VTSDLTDDTLIGGPGNDQLHGTSGNNLIQGDAGNDLVRGVAGNNTIRGGGGDDTLL 1823
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + I E D + A I + L+ A + ++ +G
Sbjct: 1824 GGQGADVIT----GEEGDDLILGDADFDIATLTIVPATIGSGDFLDGGAGNDRIVGELGD 1879
Query: 378 DVFESMK---------------------HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
D EG D + ++ D + F
Sbjct: 1880 DTILGGLGDDLLGEQFVPDFDAGFVTEPGNDFIRGGEGSDAIYAGAGDDRAFGDGGDDFV 1939
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ GV + L ++ L D + G D +
Sbjct: 1940 DGGAGNDTLWGGDGVSLFFDS---DTLCGGEGNDLLFGESGDDVLFGRAGDDTLYGGAGQ 1996
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ F G + V G + G + A ++ L
Sbjct: 1997 DYLFGGEGDDFLFGEAGNDTLVGGDGNDVIS---GGDGNDIAFGGAGDDTIFGNAGNDTL 2053
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
+ + D F+ RSI F+
Sbjct: 2054 QGGDGNDWLIGG---DTFNLVHRPRDRSIPFD 2082
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 55/360 (15%), Positives = 98/360 (27%), Gaps = 38/360 (10%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ G+DLL + + + ++ + N TI + +S+VG
Sbjct: 1673 PAGTPGLVLIGGPGNDLLRGSDLNDTIF-----GGAGNNNPVEDGNNTIEGNGGDDSLVG 1727
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+G+D + G + N++ +G D+ DG +G DT + L + + +
Sbjct: 1728 GAGDDTITGGAGNDLIQGGAGTDLLDGEAGNDTLW----GGLIGVTSDLTDDTLIGGPGN 1783
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
Q L ++ A + G D + E
Sbjct: 1784 DQ--------LHGTSGNNLIQGDAGNDLVRGVAGNNTIRGGGGDDTLLGGQGADVITGEE 1835
Query: 394 GRDITFDSYLY-----------LGSYDDLRNVFGSDRGAA------ARHYITHGVKEGRN 436
G D+ + +GS D L G+DR + + +
Sbjct: 1836 GDDLILGDADFDIATLTIVPATIGSGDFLDGGAGNDRIVGELGDDTILGGLGDDLLGEQF 1895
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
F A D I + + D + + L D +
Sbjct: 1896 VPDFDAGFVTEPGNDFIRGGEGSDAIYAGAGDDRAFGDGGDDFVDGGAGNDTLWGGDGVS 1955
Query: 497 NVFGSDR----GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
F SD + G L A + L D +AG D
Sbjct: 1956 LFFDSDTLCGGEGNDLLFGESGDDVLFGRAGDDTLYGGAGQDYLFGGEGDDFLFGEAGND 2015
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 62/494 (12%), Positives = 114/494 (23%), Gaps = 26/494 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA--LG 133
DI FI + S I G + L + +G L
Sbjct: 1275 DGDILFIDGDGVPALVDDVFSLTATSITSGFITQNNGGRTNFSNLGDVRFNPLGGVNRLN 1334
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L G + S L ++ +S+ + ++ A
Sbjct: 1335 LTGFGGNDTHRVTSLGTGRAAISSSLGGLLVSGGAFNSLGLTPGAGRDSVVIEGTNAADT 1394
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
I GA N+ + + T G+D +D + + + S
Sbjct: 1395 ITGAGTSVSLNDA---TIDLNGTFESLTADGGAGNDTIDFSDFTLQGATLLGGAGNDSLT 1451
Query: 254 GGY--------EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
G + + I + ++G GND + N+ + SG D G G+D
Sbjct: 1452 GTTFGDVIDGGDGDDLIIGGAGNDLLLGGVGNDTFVINAGD------SGADTIVGGDGVD 1505
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ NA I + + + + V
Sbjct: 1506 AAVINGTNANDTFVLGANAAIGSPGLGAQFRLAVAGASVEGDLEHVSLVGGLGNDSYIVN 1565
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
++++ D + G DI G
Sbjct: 1566 DLSTTNLRLVDLDGGAGTDSYQVSGTVGADDIGVARPNAAGPVLIQGLSATVRVFGPTID 1625
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ + E + ++N L G +
Sbjct: 1626 ETLTVLGGAGDDRIVSDAEVSRNLRVVLNGGEGNDTLGAGNSAINPLPAGTPGLVLIGGP 1685
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-------KALEYIASHEDLIN 538
L DL + G + EG D + A ++ +
Sbjct: 1686 GNDLLRGSDLNDTIFGGAGNNNPVEDGNNTIEGNGGDDSLVGGAGDDTITGGAGNDLIQG 1745
Query: 539 AFADAPDLVQAGKD 552
+AG D
Sbjct: 1746 GAGTDLLDGEAGND 1759
>gi|209549795|ref|YP_002281712.1| cadherin [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209535551|gb|ACI55486.1| Cadherin [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 928
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/291 (14%), Positives = 79/291 (27%), Gaps = 10/291 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+D I +G T ++ D D G+G I +I +
Sbjct: 439 TGTDGNDIFDGSGGNDTINGNAGNDKLTGGDGNDQIFGGVGNDVIKGGAGDDKITDGDNM 498
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G D + + + D P ++ + +
Sbjct: 499 STAPEAFDIDAGDGNDA----INLQSHSSALSGTIDGGAGTDTLRVIEPTLAPGMEFIGL 554
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G ++ + ++ D + L + + +
Sbjct: 555 AGFTIKNVEVLETAGAEVLASAAQFESFDK---IVKYDKPGYENDVLALTLTDSAHADLS 611
Query: 255 GYEKN--MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
N + I V G+D G N+ F +GND G +G+DT +
Sbjct: 612 DELANRHVDIFGTAFGIDVKTGGGDDYFFGTDGNDRFEGGAGNDALLGGAGIDTAVFAGN 671
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
Y + N + + + D L D+E RFAD D +
Sbjct: 672 FANY-TFGMNNGDHILTSAKEGTDTLRDIEIARFADGVYDFAKGTFTADHN 721
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 60/447 (13%), Positives = 108/447 (24%), Gaps = 40/447 (8%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
S + T D+ G T+ + EI +G
Sbjct: 62 GSSGPNTITTGAGNDTIVSGGGADTLSGGAGNDLLNGEAGNDTLNGGDGNDEIYGGVGND 121
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + D DY +D T + D ++ + + D A
Sbjct: 122 VLKGGAGNDTI--SDGDYFSDVAETFNIDAGDGNDKVILFTGSFAKISGTIDGGAGTDTL 179
Query: 196 GAPKGS---------LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-DL 245
A + L + I +G D + L L G + D
Sbjct: 180 QANDLTGLTIKNVEILQPATSSVTASTAQFESFDKIIGTGSDSSVQLVLTDGAHVDLSDE 239
Query: 246 NTESWSSIGGYEK--NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ I G + + + + + G++GND N+ + GND G G
Sbjct: 240 LAGKLNYIFGGPNVSGIDVTTGSARDLLTGTAGNDTFDAGDGNDYINGNGGNDRLIGGKG 299
Query: 304 LDTFFYYAPSYL----YKIYRFENAIIV-----------YDANEHKQDFL---------- 338
D S L + I + IV D L
Sbjct: 300 DDVIVDGDVSSLSSEVFNIDAGDGNDIVSLQTQSQGLSGTIDGGTGIDTLRVSRIAGLTI 359
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY-EFGLSEGRDI 397
+ E L + + + S + + + + I H L R
Sbjct: 360 KNFEILETNEYGFTGSSAQLESFDKISGTKDAFGSSIAILRLTDKAHVDLSDELGNSRAS 419
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
F + + + + + G L ++ +
Sbjct: 420 IFGTVSGIDVKTGAGDDIFTGTDGNDIFDGSGGNDTINGNAGNDKLTGGDGNDQIFGGVG 479
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ G D ++ FD
Sbjct: 480 NDVIKGGAGDDKITDGDNMSTAPEAFD 506
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/285 (17%), Positives = 82/285 (28%), Gaps = 19/285 (6%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLD------LTLIGGVKNYIDLNTESWSSIGGYEK 258
++ + S T+ DS DL D ++ G +I
Sbjct: 24 DVIRFSAANPLSAVALTVSDSSVADLADELGSVSASVRGSSGPNTITTGAGNDTIVSGGG 83
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
T++ + + G +GND + G N+ + GNDV G +G DT Y
Sbjct: 84 ADTLSGGAGNDLLNGEAGNDTLNGGDGNDEIYGGVGNDVLKGGAGNDTI----SDGDYFS 139
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFA--DQCIDSVNVKQRSILEYTASYEDLIQVIG 376
E I K + D + ++ + T +++Q
Sbjct: 140 DVAETFNIDAGDGNDKVILFTGSFAKISGTIDGGAGTDTLQANDLTGLTIKNVEILQPAT 199
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG----VK 432
V S F F G L L +V SD A +YI G
Sbjct: 200 SSVTASTAQFESFDKIIGTGSDSSVQLVLTDG---AHVDLSDELAGKLNYIFGGPNVSGI 256
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ A L A ++ + G D ++
Sbjct: 257 DVTTGSARDLLTGTAGNDTFDAGDGNDYINGNGGNDRLIGGKGDD 301
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 75/617 (12%), Positives = 143/617 (23%), Gaps = 127/617 (20%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ G T + + D G G I + G
Sbjct: 70 TTGAGNDTIVSGGGADTLSGGAGNDLLNGEAGNDTLNGGDGNDEIYGGVGNDVLKGGAGN 129
Query: 135 MHPGSYNGGYPVYGVDN-DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ- 192
+ V N D + + + + + S T +D+ +
Sbjct: 130 DTISDGDYFSDVAETFNIDAGDGNDKVILFTGSFAKISGTIDGGAGTDTLQANDLTGLTI 189
Query: 193 ---KIYGAPKGSLGNNIYKIEV------QQKDSPFIQTIYDSGGDDLLD----------- 232
+I S+ + + E DS + D DL D
Sbjct: 190 KNVEILQPATSSVTASTAQFESFDKIIGTGSDSSVQLVLTDGAHVDLSDELAGKLNYIFG 249
Query: 233 ------LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
+ + G + T + + N I + + ++G G+DV++ +
Sbjct: 250 GPNVSGIDVTTGSARDLLTGTAGNDTFDAGDGNDYINGNGGNDRLIGGKGDDVIVDGDVS 309
Query: 287 N------VFFESSGND-------------VFDGSSGLDTFF------------------- 308
+ GND DG +G+DT
Sbjct: 310 SLSSEVFNIDAGDGNDIVSLQTQSQGLSGTIDGGTGIDTLRVSRIAGLTIKNFEILETNE 369
Query: 309 --YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-------------CIDS 353
+ S + + + + L+D + +D+ ID
Sbjct: 370 YGFTGSSAQLESFDKISGTKDAFGSSIAILRLTDKAHVDLSDELGNSRASIFGTVSGIDV 429
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYD 409
I T + G D + +G D F + + G+ D
Sbjct: 430 KTGAGDDIFTGTDGNDIFDGSGGNDTINGNAGNDKLTGGDGNDQIFGGVGNDVIKGGAGD 489
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA----FADAPDLVQV 465
D + A I G + + + + +
Sbjct: 490 DKITDGDNMSTAPEAFDIDAGDGNDAINLQSHSSALSGTIDGGAGTDTLRVIEPTLAPGM 549
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSY------------------DDLRNVFGSDRG--- 504
+ F + + L S +D+ + +D
Sbjct: 550 EFIGLAGFTIKNVEVLETAGAEVLASAAQFESFDKIVKYDKPGYENDVLALTLTDSAHAD 609
Query: 505 ----AAARHYITHGVKEG------------RNPDAFKALEYIASHEDLINAFADAPDLVQ 548
A RH G G D E A ++ L+ +
Sbjct: 610 LSDELANRHVDIFGTAFGIDVKTGGGDDYFFGTDGNDRFEGGAGNDALLGGAGIDTAVFA 669
Query: 549 AGKDHFSNFGYEEGRSI 565
++ FG G I
Sbjct: 670 GNFANY-TFGMNNGDHI 685
Score = 53.6 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 65/463 (14%), Positives = 111/463 (23%), Gaps = 82/463 (17%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
TI GG D L GG N + ++ G + N I
Sbjct: 64 SGPNTITTGAGNDTIVSGGGADTL----SGGAGNDLLNGEAGNDTLNGGDGNDEIYGGVG 119
Query: 268 IESVVGSSGNDVVIGNSANN------VFFESSGND--------------VFDGSSGLDTF 307
+ + G +GND + + GND DG +G DT
Sbjct: 120 NDVLKGGAGNDTISDGDYFSDVAETFNIDAGDGNDKVILFTGSFAKISGTIDGGAGTDTL 179
Query: 308 FYY----------------APSYLYKIYRFENAIIVYDANEHK--QDFLSDVERLRFADQ 349
S +FE+ + Q L+D + +D+
Sbjct: 180 QANDLTGLTIKNVEILQPATSSVTASTAQFESFDKIIGTGSDSSVQLVLTDGAHVDLSDE 239
Query: 350 ---------------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
ID R +L TA + G D +G
Sbjct: 240 LAGKLNYIFGGPNVSGIDVTTGSARDLLTGTAGNDTFDAGDGNDYINGNGGNDRLIGGKG 299
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI- 453
D+ D + S + G + + G+ + ++ L
Sbjct: 300 DDVIVDGDVSSLSSEVFNIDAGDGNDIVSLQTQSQGLSGTIDGGTGIDTLRVSRIAGLTI 359
Query: 454 ---NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG-----SYDDLRNVFGSDRGA 505
+F G F S + + ++ DL + G+ R +
Sbjct: 360 KNFEILETNEYGFTGSSAQLESFDKISGTKDAFGSSIAILRLTDKAHVDLSDELGNSRAS 419
Query: 506 AARHY---------------ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
T G + A ++ L + G
Sbjct: 420 IFGTVSGIDVKTGAGDDIFTGTDGNDIFDGSGGNDTINGNAGNDKLTGGDGNDQIFGGVG 479
Query: 551 KDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
D G + + + D+ G+D H
Sbjct: 480 ND-VIKGGAGDDKITDGDNMSTAPEAFDIDAGDGNDAINLQSH 521
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/283 (17%), Positives = 86/283 (30%), Gaps = 24/283 (8%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + I T+ G N TI + + + G GND + G N+V +G+D
Sbjct: 431 TGAGDDIFTGTDGNDIFDGSGGNDTINGNAGNDKLTGGDGNDQIFGGVGNDVIKGGAGDD 490
Query: 297 VFDGSSGLDT----FFYYAPSYLYKI--YRFENAIIVYDANEHKQDFLS--------DVE 342
+ T F A I +A+ D L +E
Sbjct: 491 KITDGDNMSTAPEAFDIDAGDGNDAINLQSHSSALSGTIDGGAGTDTLRVIEPTLAPGME 550
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR-DITFDS 401
+ A I +V V + A E L + F+ + + + G +T
Sbjct: 551 FIGLAGFTIKNVEVLET------AGAEVLASAAQFESFDKIVKYDKPGYENDVLALTLTD 604
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR--NPDAFKALEYIASHEDLINAFADA 459
+ D+L N G A + G + D E A ++ L+
Sbjct: 605 SAHADLSDELANRHVDIFGTAFGIDVKTGGGDDYFFGTDGNDRFEGGAGNDALLGGAGID 664
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ ++ FG G + + + D+ +D
Sbjct: 665 TAVFAGNFANY-TFGMNNGDHILTSAKEGTDTLRDIEIARFAD 706
>gi|326917841|ref|XP_003205203.1| PREDICTED: matrix metalloproteinase-16-like [Meleagris gallopavo]
Length = 609
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 58/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-- 75
L Q W + I Y +T + ++ R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DAETRKAIRRAFDVWQNVTPLTFEEVPYIE 174
Query: 76 ------HSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FRLPN----DDLQGIQKIYGPPD 294
>gi|307945921|ref|ZP_07661256.1| iron-regulated protein FrpC [Roseibium sp. TrichSKD4]
gi|307769585|gb|EFO28811.1| iron-regulated protein FrpC [Roseibium sp. TrichSKD4]
Length = 482
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/330 (12%), Positives = 84/330 (25%), Gaps = 15/330 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
L G + I + + N T+ + +++ G +GND + N+
Sbjct: 16 TLIGDGRGSDEIFNAMDGNDLVYAASGNDTLYGGSGFDTLFGMNGNDSIYAGLGNDYLIG 75
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+G D+ DG G DT Y A + + + A + + D L +E + ++
Sbjct: 76 GAGIDILDGGDGADTVDYSAAASGVTVNLLDGAAS--NDGDGGSDTLISIENVIGSEGND 133
Query: 352 DSV---------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+ + +S + L G D + +G D+ +
Sbjct: 134 TIIGDVNVNILRGEGGDDAIYGNSSDDTLYGGAGNDELRGQGGLDTYYAGDGDDLIYSDQ 193
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
+ + F G + A ++
Sbjct: 194 GDTAFGEAGNDSFRGYGGTGLFDGGADEDGIWWRDYYHAGDVGLNVDLAAGTATDGDNNV 253
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
+ D+ + D F A Y G
Sbjct: 254 ATLVSIENFTGSSYADILAGDDNANIIRGGSD----FNGAIDQADTIYGRGGADFLYGDS 309
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ ++ + D AG D
Sbjct: 310 GNDTVYGGDDNDLIYGNNGDDILYGDAGVD 339
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 39/286 (13%), Positives = 82/286 (28%), Gaps = 13/286 (4%)
Query: 217 PFIQTIYDSGGDDLLDLTLI--GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ GG D L G N + + + + G + I ++ +++ G
Sbjct: 106 DGAASNDGDGGSDTLISIENVIGSEGNDTIIGDVNVNILRGEGGDDAIYGNSSDDTLYGG 165
Query: 275 SGNDVVIGNSANNVFFESSGNDVFD--------GSSGLDTFFYYAPSYLYKIYRFENAII 326
+GND + G + ++ G+D+ G +G D+F Y + L+ E+ I
Sbjct: 166 AGNDELRGQGGLDTYYAGDGDDLIYSDQGDTAFGEAGNDSFRGYGGTGLFDGGADEDGIW 225
Query: 327 VYDANEHK-QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D D+ D + + ++ + L ++
Sbjct: 226 WRDYYHAGDVGLNVDLAAGTATDGDNNVATLVSIENFTGSSYADILAGDDNANIIRGGSD 285
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
F G + D + Y D N Y +G +
Sbjct: 286 FN--GAIDQADTIYGRGGADFLYGDSGNDTVYGGDDNDLIYGNNGDDILYGDAGVDTING 343
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
++ L G D F ++ + + ++
Sbjct: 344 GNGNDTLYGGEGIDRLYGGTGDDTFYFDEEKDSMWGQTGADTFIAE 389
Score = 41.3 bits (95), Expect = 0.54, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 60/244 (24%), Gaps = 11/244 (4%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + D A G+
Sbjct: 165 GAGNDELRGQGGLDTYYAGDGDDLIYSDQGDTAFGEAGNDSFRGYGGTGLFDGGADEDGI 224
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
Y+ G VD + + S+ + + A + D A
Sbjct: 225 WWRDYYHAGDVGLNVDLAAGTATDGD---NNVATLVSIENFTGSSYADILAGDDNANIIR 281
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G+ + +Y G+D + GG N + +
Sbjct: 282 GGSDFNGAIDQA----DTIYGRGGADFLYGDSGNDTV----YGGDDNDLIYGNNGDDILY 333
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G TI +++ G G D + G + ++ F+ D G +G DTF +
Sbjct: 334 GDAGVDTINGGNGNDTLYGGEGIDRLYGGTGDDTFYFDEEKDSMWGQTGADTFIAEEEAD 393
Query: 315 LYKI 318
+
Sbjct: 394 NNYL 397
>gi|325202620|gb|ADY98074.1| Iron-regulated protein frpA [Neisseria meningitidis M01-240149]
Length = 945
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/258 (15%), Positives = 77/258 (29%), Gaps = 11/258 (4%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G +N + G
Sbjct: 581 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFSQDTVYNYDYATGR 640
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 641 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 700
Query: 188 --IVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y +Y + GDDLL+ G N
Sbjct: 701 VLDVATVKELVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDAGNDS 756
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 757 IYSGNGNDTLDGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 816
Query: 304 LDTFFYYAPSYLYKIYRF 321
DT+ + +Y +
Sbjct: 817 SDTYIFGKGFGQDTVYNY 834
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 80/288 (27%), Gaps = 60/288 (20%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 586 GHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFSQDTVYNYDYATGRKDIIR 645
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSV- 354
+ V ++ ++ + F + + V
Sbjct: 646 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 705
Query: 355 --------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L S L +G D G D +Y G
Sbjct: 706 TVKELVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLNGDAGND-----SIYSG 760
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ +D + + Y +G + L ++ LI + G
Sbjct: 761 NGNDTLDGGEGNDAL----YGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 816
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
D + FG G+ ++ ++ D AA H+I G
Sbjct: 817 SDTYI-FGKGFGQDTVYN--YHVDKNSDTM--HFKGFKAADVHFIRSG 859
>gi|317154878|ref|YP_004122926.1| peptidase S8 and S53 subtilisin kexin sedolisin [Desulfovibrio
aespoeensis Aspo-2]
gi|316945129|gb|ADU64180.1| peptidase S8 and S53 subtilisin kexin sedolisin [Desulfovibrio
aespoeensis Aspo-2]
Length = 911
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 7/139 (5%)
Query: 194 IYGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+YG + IY T+ D GG D ++ + + G + ++L S S
Sbjct: 687 LYGDNPSADDYYIYTDEYADMVAADVSRATLEDGGGTDTINASAVTGN-SIVNLTPGSVS 745
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G +TIA T IE GND++ GN ANN F GND G +G D +
Sbjct: 746 TLAGTS--LTIAAGTTIEHAHTGDGNDILTGNDANNNLFGWRGNDAISGGAGNDLLY--G 801
Query: 312 PSYLYKIYRFENAIIVYDA 330
+ + Y
Sbjct: 802 GTGSDTLTGGTGNDTFYYG 820
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 12/126 (9%), Positives = 30/126 (23%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
S+ + + + ++ + G DT A + + ++
Sbjct: 693 SADDYYIYTDEYADMVAADVSRATLEDGGGTDTINASAVTGNSIVNLTPGSVSTLAGTSL 752
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ +E D + L + + G D+
Sbjct: 753 TIAAGTTIEHAHTGDGNDILTGNDANNNLFGWRGNDAISGGAGNDLLYGGTGSDTLTGGT 812
Query: 394 GRDITF 399
G D +
Sbjct: 813 GNDTFY 818
>gi|163738468|ref|ZP_02145883.1| type I secretion target repeat protein [Phaeobacter gallaeciensis
BS107]
gi|161388389|gb|EDQ12743.1| type I secretion target repeat protein [Phaeobacter gallaeciensis
BS107]
Length = 785
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 58/199 (29%), Gaps = 25/199 (12%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
T+Y G+D L+ G N + E + G +++ I +++
Sbjct: 321 TITAGYGDDTLYGGDGNDRLE----GLYGNDLIYAGEGDDHVFGRDQDDLIYGEGGNDTL 376
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF------------------FYYAPS 313
+GS G D V G + N++ S GND G G D F S
Sbjct: 377 IGSMGTDTVWGGAGNDILAGSQGNDEIHGGDGDDLAFIGVYEDSDRIFLDDGNDFLDGSS 436
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYED 370
Y + D L E RL + ++E +
Sbjct: 437 AGSSFYGEGGRGNDVMNSGVGNDTLLGGEGYDRLSGGTGGDSLDGGSEDDVIEGGGGADT 496
Query: 371 LIQVIGQDVFESMKHFYEF 389
LI G D F
Sbjct: 497 LIGGTGADSLYGDDDRDLF 515
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 77/302 (25%), Gaps = 20/302 (6%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ I ++V+ G+D V + ++ +GND G G D
Sbjct: 213 DAADGSQDDVIVAGGGNDTVLAGEGDDFVDAGTGDDSVEGGAGNDTLFGGGGRD--LLQG 270
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + + +D L + +L + +
Sbjct: 271 GAGNDLLQGGIDGDTL--EGGAGRDTLEG------GAGNDSLSSGDDNDLLLGGDGDDTI 322
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D G D+ Y G DD +VFG D+ Y G
Sbjct: 323 TAGYGDDTLYGGDGNDRLEGLYGNDLI-----YAGEGDD--HVFGRDQDDLI--YGEGGN 373
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+ A ++ L + + G D E+ + D
Sbjct: 374 DTLIGSMGTDTVWGGAGNDILAGSQGNDEIHGGDGDDLAFIGVYEDSDRIFLDDGNDFLD 433
Query: 492 YDDLRNVFGSDRGAAARHYIT-HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+ F + G + G + + L + L D G
Sbjct: 434 GSSAGSSFYGEGGRGNDVMNSGVGNDTLLGGEGYDRLSGGTGGDSLDGGSEDDVIEGGGG 493
Query: 551 KD 552
D
Sbjct: 494 AD 495
>gi|125654624|ref|YP_001033818.1| hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
gi|77386284|gb|ABA81713.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
Length = 1029
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 60/238 (25%), Gaps = 17/238 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSS 302
++ G N + E + G GND + G N++ +GND G +
Sbjct: 686 TLRGSGGNDRLIGTANAERIEGFGGNDRIEGRGGNDLLSGGAGNDLLDGGGGRDRMVGGT 745
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSI 361
G D + I + ++VERL S ++
Sbjct: 746 GNDRYIVNH--AGDSTIELAGGGIDTVQSSLSWTLAANVERLVLTGGAALSGTGNGLANL 803
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L L + G D G D G R G D
Sbjct: 804 LTGNGGANRLQGLAGNDTLNGGGGRDVMIGGTGNDTYITD---GGDTIVERAGQGVDVVR 860
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEE 477
A+ Y E L + LI G D S G +
Sbjct: 861 ASVSYTLGAQLETLVLTGTANLSGTGNGLSNLLIGNGGANRLSGGAGNDTLSGGGGAD 918
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/324 (12%), Positives = 75/324 (23%), Gaps = 26/324 (8%)
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+RL +E + L G D+ + G D
Sbjct: 692 GNDRLIGTANAERIEGFGGNDRIEGRGGNDLLSGGAGNDLLDGGGGRDRMVGGTGNDRYI 751
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED--LINAFA 457
+ G G D ++ + E AL + L
Sbjct: 752 --VNHAGDSTIELAGGGIDTVQSSLSWTLAANVERLVLTGGAALSGTGNGLANLLTGNGG 809
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR---NVFGSDRGAAARHYITHG 514
G D + G + + Y+ D G D A+ Y
Sbjct: 810 ANRLQGLAGNDTLNGGGGRDVMIGGTGNDTYITDGGDTIVERAGQGVDVVRASVSYTLGA 869
Query: 515 VKE--------GRNPDAFKALEYIASHED---LINAFADAPDLVQAGKDHFSNFGYEEGR 563
E + + + L + G D G
Sbjct: 870 QLETLVLTGTANLSGTGNGLSNLLIGNGGANRLSGGAGNDTLSGGGGAD--LLIGGAGRD 927
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
S FN + D + + +D ++ + G+ G G + +
Sbjct: 928 SFVFNTRPGPGAIDRIADFNVADDVIHLENAVFRGLPAGALRG------AAFASNLSGQA 981
Query: 624 DKADLSLSFDHKKVDLYTDYFGDG 647
A + ++ L+ D G G
Sbjct: 982 TDAADRILYERDTGALWFDADGTG 1005
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 34/123 (27%), Gaps = 4/123 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGG----VKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ G+D +D+ S S G + +
Sbjct: 818 GNDTLNGGGGRDVMIGGTGNDTYITDGGDTIVERAGQGVDVVRASVSYTLGAQLETLVLT 877
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T S G+ ++++IGN N +GND G G D A +
Sbjct: 878 GTANLSGTGNGLSNLLIGNGGANRLSGGAGNDTLSGGGGADLLIGGAGRDSFVFNTRPGP 937
Query: 325 IIV 327
+
Sbjct: 938 GAI 940
>gi|119512974|ref|ZP_01632035.1| probable fibrinogen-binding protein-like protein [Nodularia
spumigena CCY9414]
gi|119462387|gb|EAW43363.1| probable fibrinogen-binding protein-like protein [Nodularia
spumigena CCY9414]
Length = 859
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 57/396 (14%), Positives = 93/396 (23%), Gaps = 42/396 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
T D D+ G ++ + + G
Sbjct: 42 DGGSGTDYLYGGSGDDTINGGDGNDYLFGQDGNDILNGGGDDDSLHGGSGDDILNGGDGN 101
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + G+D Y D+ ++ + S M D
Sbjct: 102 DRLYGDAGNDIIDGIDFLYG-DAGNDTINGGSGTDTYAANYSDRLVGLTMTYDSAT---- 156
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS--GGDDLLDLTLIGGVKNYIDLNTESWSS 252
G +G + F T +D G D ++ GG N
Sbjct: 157 -GNGSIVVGTETDTFTSIENFDSFRGTNFDDIIVGGSTGDYSIYGGAGNDTISGNAGNDR 215
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N TI + + G SG+D + G ++ FF GND +G G D +
Sbjct: 216 LYGEDGNDTINGGGDNDILYGGSGDDTINGGDGSDYFFGGDGNDTINGGDGDDYLY---- 271
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ D L+ IL A + L+
Sbjct: 272 ------------------GDAGNDMLNG------DAGYDRLYGGSGNDILNGDAGGDYLV 307
Query: 373 QVIGQDVFESMKHF----YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
G D G D YDD ++
Sbjct: 308 GGSGNDTLIGGSGNSGERDRLSGGSGSDRFIIGDATWIGYDDGNAA--TNGNNDYAEIAD 365
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
EG ++Y+ S +
Sbjct: 366 FNEAEGDIIQLKAGVDYLLSVSGTDTQILIDKPGTE 401
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 74/300 (24%), Gaps = 26/300 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ TI G+D LD GG + + + G + N +
Sbjct: 19 GNDYITGTDQDDTIDGGSGNDTLDGGSGTDYLYGGSGDDTINGGDGNDYLFGQDGNDILN 78
Query: 264 QHTVIESVVGSSGNDVVIGNSANNV---------------FFESSGNDVFDGSSGLDTFF 308
+S+ G SG+D++ G N+ + +GND +G SG DT+
Sbjct: 79 GGGDDDSLHGGSGDDILNGGDGNDRLYGDAGNDIIDGIDFLYGDAGNDTINGGSGTDTYA 138
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHK--QDFLSDVERLRFADQC----IDSVNVKQRSIL 362
L + ++ + D + +E I +
Sbjct: 139 ANYSDRLVGLTMTYDSATGNGSIVVGTETDTFTSIENFDSFRGTNFDDIIVGGSTGDYSI 198
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
A + + G D DI + + +
Sbjct: 199 YGGAGNDTISGNAGNDRLYGEDGNDTINGGGDNDILYGGSGDDTINGGDGSDYFFGGDGN 258
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
G L A ++ L + G D+ +
Sbjct: 259 DTINGGDGDDYLYGDAGNDMLNGDAGYDRLYGGSGNDILNGDAGGDYLVGGSGNDTLIGG 318
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/328 (16%), Positives = 88/328 (26%), Gaps = 31/328 (9%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G N T+ +I G N T+ + + + G SG+D + G N+ F GN
Sbjct: 15 QGTQGNDYITGTDQDDTIDGGSGNDTLDGGSGTDYLYGGSGDDTINGGDGNDYLFGQDGN 74
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D+ +G D+ + S + + +Y + D + ++ L
Sbjct: 75 DILNGGGDDDSL--HGGSGDDILNGGDGNDRLY--GDAGNDIIDGIDFLYGDAGNDTING 130
Query: 356 VKQRSILEYTASYE------DLIQVIGQDVFESMKHFYEFGLSEG----RDITFDSYLYL 405
S G F E R FD +
Sbjct: 131 GSGTDTYAANYSDRLVGLTMTYDSATGNGSIVVGTETDTFTSIENFDSFRGTNFDDIIVG 190
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
GS D G+ G D + ++ L D
Sbjct: 191 GSTGDYSIYGGAG---NDTISGNAGNDRLYGEDGNDTINGGGDNDILYGGSGDDTINGGD 247
Query: 466 GKDHFSNF-GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
G D+F G + D YLY + +D+ N G
Sbjct: 248 GSDYFFGGDGNDTINGGDGDDYLYGDAGNDMLN-------------GDAGYDRLYGGSGN 294
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKD 552
L A + L+ + + +G
Sbjct: 295 DILNGDAGGDYLVGGSGNDTLIGGSGNS 322
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 81/303 (26%), Gaps = 17/303 (5%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+ GND + G ++ SGND DG SG D + Y S I + ++
Sbjct: 13 NFQGTQGNDYITGTDQDDTIDGGSGNDTLDGGSGTD--YLYGGSGDDTINGGDGNDYLFG 70
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + L IL + L G D+ + + Y
Sbjct: 71 QDGND--------ILNGGGDDDSLHGGSGDDILNGGDGNDRLYGDAGNDIIDGIDFLYGD 122
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE---GRNPDAFKALEYI 446
++ + + Y +Y D +A + E + + F +
Sbjct: 123 AGNDTINGGSGTDTYAANYSDRLVGLTMTYDSATGNGSIVVGTETDTFTSIENFDSFRGT 182
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ ++ + + + R D + D ++G
Sbjct: 183 NFDDIIVGGSTGDYSIYGGAGNDTISGNAGNDRLYGEDGNDTINGGGDNDILYGGSGDDT 242
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
G D + + L + AG D +G +
Sbjct: 243 IN--GGDGSDYFFGGDGNDTINGGDGDDYLYGDAGNDMLNGDAGYD--RLYGGSGNDILN 298
Query: 567 FNP 569
+
Sbjct: 299 GDA 301
>gi|194043362|ref|XP_001929480.1| PREDICTED: stromelysin-3-like [Sus scrofa]
Length = 491
Score = 76.0 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 62/195 (31%), Gaps = 52/195 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIH 76
L W + Y+ + + ++ AL WS V LTF E H
Sbjct: 103 LSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALQVWSDVTPLTFTEVHEGH 155
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G +GT L
Sbjct: 156 ADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTVGDNQGTDLL 213
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H + ++MS +F Y
Sbjct: 214 QVAAHEFGHVLGLQHT-------------------TAAKALMS--------PFYTFRYPL 246
Query: 182 TPMVSDIVAVQKIYG 196
+ D +Q +YG
Sbjct: 247 SLSPDDRRGIQHLYG 261
>gi|224162231|ref|XP_002338425.1| predicted protein [Populus trichocarpa]
gi|222872207|gb|EEF09338.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 54/159 (33%), Gaps = 19/159 (11%)
Query: 1 MHNIKPVYTTERIAD-HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW-- 57
MH+I P T H++ + N +++P +F + + R
Sbjct: 117 MHDITPNNTKSNYTKFHMVMHYTFFNGMPKWRPSKYH-LTYTFGSDGVQVVDMDTLRSVC 175
Query: 58 --ALGEWSKVVDLTFEETSIHSDIKFIS----SNNGYVCTPRYDSRYFMEIN-------- 103
A +WS V LTF+E S + + ++G +
Sbjct: 176 SDAFKKWSDVSPLTFQEASDGASANIVIAFYRGDHGDGYPFDGPGKILAHAFSPENGRFH 235
Query: 104 FDKADVWRYGIGKGTILS-HNALHEIGHALGLMHPGSYN 141
+D + W I A+HEIGH LGL H N
Sbjct: 236 YDADEKWSTNPAMDQIDLESVAVHEIGHLLGLAHSSDSN 274
>gi|126464912|ref|YP_001041888.1| Na-Ca exchanger/integrin-beta4 [Rhodobacter sphaeroides ATCC 17029]
gi|126106727|gb|ABN79252.1| Na-Ca exchanger/integrin-beta4 [Rhodobacter sphaeroides ATCC 17029]
Length = 1029
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 60/238 (25%), Gaps = 17/238 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSS 302
++ G N + E + G GND + G N++ +GND G +
Sbjct: 686 TLRGSGGNDRLIGTANAERIEGFGGNDRIEGRGGNDLLSGGAGNDLLDGGGGRDRMVGGT 745
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSI 361
G D + I + ++VERL S ++
Sbjct: 746 GNDRYIVNH--AGDSTIELAGGGIDTVQSSLSWTLAANVERLVLTGGAALSGTGNGLANL 803
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L L + G D G D G R G D
Sbjct: 804 LTGNGGANRLQGLAGNDTLNGGGGRDVMIGGTGNDTYITD---GGDTIVERAGQGVDVVR 860
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEE 477
A+ Y E L + LI G D S G +
Sbjct: 861 ASVSYTLGAQLETLVLTGTANLSGTGNGLSNLLIGNGGANRLSGGAGNDTLSGGGGAD 918
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/341 (12%), Positives = 81/341 (23%), Gaps = 35/341 (10%)
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + ++ ER+ +L A + L G+D
Sbjct: 684 DGTLRGSGGNDRLIGTANAERIEGFGGNDRIEGRGGNDLLSGGAGNDLLDGGGGRDRMVG 743
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ ++ + G G D ++ + E A
Sbjct: 744 GTGNDRYIVN-----------HAGDSTIELAGGGIDTVQSSLSWTLAANVERLVLTGGAA 792
Query: 443 LEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR---N 497
L + L G D + G + + Y+ D
Sbjct: 793 LSGTGNGLANLLTGNGGANRLQGLAGNDTLNGGGGRDVMIGGTGNDTYITDGGDTIVERA 852
Query: 498 VFGSDRGAAARHYITHGVKE--------GRNPDAFKALEYIASHED---LINAFADAPDL 546
G D A+ Y E + + + L +
Sbjct: 853 GQGVDVVRASVSYTLGAQLETLVLTGTANLSGTGNGLSNLLIGNGGANRLSGGAGNDTLS 912
Query: 547 VQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
G D G S FN + D + + +D ++ + G+ G G
Sbjct: 913 GGGGAD--LLIGGAGRDSFVFNTRPGPGAIDRIADFNVADDVIHLENAVFRGLPAGALRG 970
Query: 607 ISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
+ + A + ++ L+ D G G
Sbjct: 971 ------AAFASNLSGQATDAADRILYERDTGALWFDADGTG 1005
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 34/123 (27%), Gaps = 4/123 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGG----VKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ G+D +D+ S S G + +
Sbjct: 818 GNDTLNGGGGRDVMIGGTGNDTYITDGGDTIVERAGQGVDVVRASVSYTLGAQLETLVLT 877
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T S G+ ++++IGN N +GND G G D A +
Sbjct: 878 GTANLSGTGNGLSNLLIGNGGANRLSGGAGNDTLSGGGGADLLIGGAGRDSFVFNTRPGP 937
Query: 325 IIV 327
+
Sbjct: 938 GAI 940
>gi|297537209|ref|YP_003672978.1| Ig family protein [Methylotenera sp. 301]
gi|297256556|gb|ADI28401.1| Ig family protein [Methylotenera sp. 301]
Length = 3249
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 67/520 (12%), Positives = 130/520 (25%), Gaps = 45/520 (8%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E ++ + N ++ I D D G G T+
Sbjct: 2521 ENLTLTGTTAINGTGNALDNLLTGNTANNTLIGGDGNDTLNGGTGADTMSGGLGNDI--- 2577
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+ V + D+ +S+ + + T + A
Sbjct: 2578 -------YVVDNVGDVVTENAGEGTDTVQSSITYTLGNALENLTLTG---TTAINGTGNA 2627
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ + + T+ GDDL + + I+ E +
Sbjct: 2628 LDNVLTGNTANNTLIGGDGNDTLNGGTGADTMSGGLGDDLYIVDNV--NDILIENADEGY 2685
Query: 251 SSIGGYEKNMTIA--------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
++ +A TV + VG+ N+ ++GN+A N G+DV G +
Sbjct: 2686 DTVQTSVTLTGLADNIEGITLTGTVAINAVGNGLNNTMVGNAAANKLEGGDGDDVISGGA 2745
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHK---------QDFLSDVERLRFADQCIDS 353
G DT + LY + + +I ++VE L I++
Sbjct: 2746 GADTMVGGNGNDLYTVDNVNDIVIEDVNGGDSDWIKTSVTLTSLAANVEILAILGTVINA 2805
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ +I+ +S + +G D + + DI +S
Sbjct: 2806 TGNELDNIIFGNSSNNVIDGGLGGDGMAGGAGNDTYLVDNINDIVSESAGGGTDNVQSSI 2865
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS-- 471
+ G + A L + G D +
Sbjct: 2866 TYTLTDNVENLTLTGTNPINGTGNTLNNTITGNAGSNTLDGGAGTDILVGGAGNDTYIVD 2925
Query: 472 ----NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG---RNPDAF 524
N + V L + G N
Sbjct: 2926 LTATNTLQDSITEVAAGGIDTLVLRGGTVLATAATITLGTEVDNLDASATGMTLLNLTGN 2985
Query: 525 KALEYI----ASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
++ A++ A + AG D F++
Sbjct: 2986 ALANFMKGNSANNTLTDTAGGNDILQGFAGIDTFNDTVGN 3025
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/342 (14%), Positives = 97/342 (28%), Gaps = 32/342 (9%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGY-EKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ T + +DL + G + + + + + + G++ ND +IG N++
Sbjct: 2329 TISGTALDANIGVLDLKVTATDMAGTNVQDSFQLTINPLNRVLTGTTANDTLIGGQGNDL 2388
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+G+D G G DT+ + + N + ++E L
Sbjct: 2389 LDGGAGSDTMKGGKGNDTYIVDNVA--DIVSENLNEGTDTVQSSVTYLLTGNIENLVLTG 2446
Query: 349 Q-CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
I++V +IL + L G D + +G
Sbjct: 2447 NIAINAVGNTLDNILTGNTANNTLNGAAGADTMSGGLGNDIY-----------VVDNVGD 2495
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQV 465
G+D ++ Y E A+ + D L A+ +
Sbjct: 2496 VVTENAGEGTDTVQSSITYTLGNALENLTLTGTTAINGTGNALDNLLTGNTANNTLIGGD 2555
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSY-DDLRNVF---GSDRGAAARHYITHGVKEGRNP 521
G D + + + +Y+ D+ G+D ++ Y E
Sbjct: 2556 GNDTLNGGTGADTMSGGLGNDIYVVDNVGDVVTENAGEGTDTVQSSITYTLGNALENLTL 2615
Query: 522 DAFKALE-----------YIASHEDLINAFADAPDLVQAGKD 552
A+ ++ LI + G D
Sbjct: 2616 TGTTAINGTGNALDNVLTGNTANNTLIGGDGNDTLNGGTGAD 2657
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/529 (11%), Positives = 146/529 (27%), Gaps = 49/529 (9%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ ++S G + I ADV G I + L
Sbjct: 1106 VASDGLDTYLSGGRGDDAL-YGSTGADELIGGQGADVLNGDAGNDNITGGTGNDMLNGGL 1164
Query: 133 GLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G G ND + + ++ + D + + I
Sbjct: 1165 GADTYQFQLGDGNDTLAEQNDAISHIQFGAGITTNDISITYTDPT--KPDPSLGFTINYG 1222
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-SW 250
+ + ++I+ ++ + D ++ L+ ++L + S
Sbjct: 1223 THLDVTTNITTTDSIHFMQGLNNGITADFSFADGTTIASIEDLLVLSNHTALNLTADDSN 1282
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND------------VF 298
+ + G +N T+ + ++ GND + G +++ +G+D +
Sbjct: 1283 NILIGSNQNDTLIGLNGDDGLIAGQGNDTLNGGQGHDILMGGTGDDRYLFNLGDGQDLII 1342
Query: 299 DGSSGLDTFFYYAPSYLYKI-----YRFENAIIVYDANEHKQDFLS-------DVERLRF 346
D ++ +T + A L I Y + + ++ D ++ +++ +F
Sbjct: 1343 DSNAENNTIVFGAGISLDSITTQQSYGQDGKDYLTLYYGNQGDSITIQNGSNNSIKQFQF 1402
Query: 347 ADQCID------------SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF--GLS 392
D L + + L G D + L
Sbjct: 1403 TDTNNSYSLNSIIANPLTLNGTAGNDTLIGNRNNDTLDGKAGNDTLIGGLGNDTYLINLG 1462
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
+G D +S + ++ S + +T + + + L+Y ++ D
Sbjct: 1463 DGTDTIIESSNGQSNANNTVQFGPSYGAGINLNDVTGTKRIDADGKEYLVLQYGSNPSDQ 1522
Query: 453 IN------AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
++ + + +SN G ++ L + + + S A
Sbjct: 1523 VSILDGFKGAIQNYQIQKTTTVVYSNGGGYTNTDPVTLTWQALIASTVITPLTVSGTEGA 1582
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
L A ++ L + G D +
Sbjct: 1583 DSLIGGKASDTLLGGAGDDVLTANAGNDLLDGGAGNDMLDGGVGLDTYV 1631
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/333 (12%), Positives = 85/333 (25%), Gaps = 47/333 (14%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM----- 260
Y + ++ I + + LD L G N ++ G N
Sbjct: 2432 TYLLTGNIENLVLTGNIAINAVGNTLDNILTGNTANNTLNGAAGADTMSGGLGNDIYVVD 2491
Query: 261 --------------------------------TIAQHTVIESVVGSSGNDVVIGNSANNV 288
T+ T I + G++ ++++ GN+ANN
Sbjct: 2492 NVGDVVTENAGEGTDTVQSSITYTLGNALENLTLTGTTAI-NGTGNALDNLLTGNTANNT 2550
Query: 289 FFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
GND +G +G DT Y + + + + +
Sbjct: 2551 LIGGDGNDTLNGGTGADTMSGGLGNDIYVVDNVGDVVTENAGEGTDTVQSSITYTLGNAL 2610
Query: 342 ERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
E L I+ ++L + LI G D G D+
Sbjct: 2611 ENLTLTGTTAINGTGNALDNVLTGNTANNTLIGGDGNDTLNGGTGADTMSGGLGDDLYIV 2670
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLINAFADA 459
+ ++ + + + + + ++ + ++ A
Sbjct: 2671 DNVNDILIENADEGYDTVQTSVTLTGLADNIEGITLTGTVAINAVGNGLNNTMVGNAAAN 2730
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
G D S + + LY
Sbjct: 2731 KLEGGDGDDVISGGAGADTMVGGNGNDLYTVDN 2763
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/385 (13%), Positives = 106/385 (27%), Gaps = 29/385 (7%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNA-----LHEIGHALGLMHPGSYNGGYPVYGVDN 151
I D G G+ T + + + + + L V
Sbjct: 966 GNDTLIGNGDGDYLAGGAGQDTYYAQAGDLIDDVDQDANTIKLGSANQDANAANVTMELV 1025
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
+ + T + S Y S+ +V + G ++
Sbjct: 1026 ELDIVDPDTQASHVEQAMAISNNGSTSYILHGTTSNAKSVFDLGGTQISYATLVGDTLQT 1085
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
Q T +D L + + + G + + T + +
Sbjct: 1086 QINIKAVNATAIGGMQNDTLVAS------------DGLDTYLSGGRGDDALYGSTGADEL 1133
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G G DV+ G++ N+ +GND+ +G G DT+ + + +A
Sbjct: 1134 IGGQGADVLNGDAGNDNITGGTGNDMLNGGLGADTYQFQLGDGNDTLAEQNDA---ISHI 1190
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH-----F 386
+ ++ + + D ++ + Y + + D M+
Sbjct: 1191 QFGAGITTNDISITYTDPTKPDPSLGF--TINYGTHLDVTTNITTTDSIHFMQGLNNGIT 1248
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
+F ++G I L + S N+ D + G N D L
Sbjct: 1249 ADFSFADGTTIASIEDLLVLSNHTALNLTADDSNNILIGSNQNDTLIGLNGD--DGLIAG 1306
Query: 447 ASHEDLINAFADAPDLVQVGKDHFS 471
++ L + G D +
Sbjct: 1307 QGNDTLNGGQGHDILMGGTGDDRYL 1331
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/233 (13%), Positives = 73/233 (31%), Gaps = 12/233 (5%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ I D G T++ LG
Sbjct: 1422 NGTAGNDTLIGNRNNDTLDGKAGNDTLIGGLGNDTYLINLG-----DGTDTIIESSNGQS 1476
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
N++ + + + A + YG+ + + +
Sbjct: 1477 NANNTVQFGPSYGAGINLNDVTGTKRIDADGKEY----LVLQYGSNPSDQVSILDGFKGA 1532
Query: 213 QKDSPFIQT---IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ +T +Y +GG + + I + ++ G E ++ +
Sbjct: 1533 IQNYQIQKTTTVVYSNGGGYTNTDPVTLTWQALIASTVITPLTVSGTEGADSLIGGKASD 1592
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++G +G+DV+ N+ N++ +GND+ DG GLDT+ + + +
Sbjct: 1593 TLLGGAGDDVLTANAGNDLLDGGAGNDMLDGGVGLDTYVFNKGTGNDVVLETN 1645
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 47/132 (35%), Gaps = 9/132 (6%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG- 276
F T + + G+D L+ + G+ N + + G + + + G G
Sbjct: 317 FKDTKFGTSGNDELNGGFLIGLGNDVLFGLGGNDHLDGGLGKDRLYGGAGDDVLDGGWGD 376
Query: 277 --------NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
ND + G N+ +GND +G G D + + Y + ++
Sbjct: 377 DQLYGGKDNDTLNGGDDNDHLEGGAGNDTLNGGEGADYLYGGTGTDTYIHNTGDGNDVIM 436
Query: 329 DANEHKQDFLSD 340
D++ + ++
Sbjct: 437 DSDGDGKILING 448
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 52/464 (11%), Positives = 108/464 (23%), Gaps = 59/464 (12%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
ND S + ++ D +GY + I G + + +
Sbjct: 661 GNDLISGSSAADYIDGGDDNDILYGYAGDDNMFGGKGKDYIVGGDGNDNIDGG-TEDDEL 719
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK-----NMTIAQHTVI 268
+ G+D+L L + +S +GG N +
Sbjct: 720 VGGYGADYLMGGAGNDILIADLPKVAGTDAPPTSTDYSQMGGDILDGGIGNDELYGGAGD 779
Query: 269 ESVVGSSGNDVVIGNS--------ANNVFFESSGNDVFDGSSGLDTF------------- 307
++ G G+D + G+ N+ G D G+ G DT
Sbjct: 780 NTLFGGKGDDNLSGDGLGTPAQYHGNDYLDGGEGTDQLWGNGGNDTLLGGDGNDHIEGDY 839
Query: 308 -------------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---------VERLR 345
+ +I ++ + +
Sbjct: 840 NVAKLAGQYHGNDLIDGGAGDDEILGEGGNDTIFGGAGDDLILGDGGGVSAEFEGDDVID 899
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD----S 401
D + L A + L +G D + E D
Sbjct: 900 GGDGDDEISGDGGNDTLLGGAGKDKLYGGLGNDQLDGGAGDDRLHGGEDSDTLQGGSGHD 959
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
LY +D G A + + + N A+A +
Sbjct: 960 ALYGEMGNDTLIGNGDGDYLAGGAGQDTYYAQAGDLIDDVDQDANTIKLGSANQDANAAN 1019
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
+ + + + + + + + + + A + G +
Sbjct: 1020 VTMELVE--LDIVDPDTQASHVEQAMAISNNGSTSYILHGTTSNAKSVFDLGGTQISYAT 1077
Query: 522 DAFKAL----EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
L A + I + + G D + + G +
Sbjct: 1078 LVGDTLQTQINIKAVNATAIGGMQNDTLVASDGLDTYLSGGRGD 1121
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 46/410 (11%), Positives = 90/410 (21%), Gaps = 26/410 (6%)
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
D G G T+ + GL P Y+G + G + + +
Sbjct: 770 NDELYGGAGDNTLFGGKGDDNLS-GDGLGTPAQYHGNDYLDGGEGTDQLWGNGGNDTLLG 828
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
+ ++ + + LG I G
Sbjct: 829 GDGNDHIEGDYNVAKLAGQYHGNDLIDGGAGDDEILGE---GGNDTIFGGAGDDLILGDG 885
Query: 227 GDDLLDLTLIGGVKNYIDLNTES----WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
G + + + S ++ G + + + G +G+D + G
Sbjct: 886 GGVSAEFEGDDVIDGGDGDDEISGDGGNDTLLGGAGKDKLYGGLGNDQLDGGAGDDRLHG 945
Query: 283 NSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQ 335
++ SG+D G G DT + + Y +I +
Sbjct: 946 GEDSDTLQGGSGHDALYGEMGNDTLIGNGDGDYLAGGAGQDTYYAQAGDLIDDVDQDANT 1005
Query: 336 DFLSDVE----------RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
L L D ++ ++ +
Sbjct: 1006 IKLGSANQDANAANVTMELVELDIVDPDTQASHVEQAMAISNNGSTSYILHGTTSNAKSV 1065
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
F G L N + G+ + Y
Sbjct: 1066 FDLGGTQISYATLVGDTLQTQINIKAVNATAIGGMQNDTLVASDGLDTYLSGGRGDDALY 1125
Query: 446 IASHED-LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
++ D LI G D+ + + + Y D
Sbjct: 1126 GSTGADELIGGQGADVLNGDAGNDNITGGTGNDMLNGGLGADTYQFQLGD 1175
Score = 44.0 bits (102), Expect = 0.078, Method: Composition-based stats.
Identities = 34/386 (8%), Positives = 88/386 (22%), Gaps = 67/386 (17%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
++ + + N + AD G G N + +
Sbjct: 2714 AVGNGLNNTMVGNAAANKLEGGDGDDVISGGAGADTMVGGNGNDLYTVDNVNDIVIEDVN 2773
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ + + E + L +V++ + +
Sbjct: 2774 GGDSDWIKTSVTLTSLAANVEILAILGTVINATGNELDNIIFGNSSNNVIDGGLGGDGMA 2833
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
L +NI + + G D++ N +L + I
Sbjct: 2834 GGAGNDTYLVDNI---------NDIVSESAGGGTDNVQSSITYTLTDNVENLTLTGTNPI 2884
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-------------- 299
G +T+ ++ G++G++ + G + ++ +GND +
Sbjct: 2885 NGT-------GNTLNNTITGNAGSNTLDGGAGTDILVGGAGNDTYIVDLTATNTLQDSIT 2937
Query: 300 --GSSGLDTFFYYAPSYLYKIY-----------------------------------RFE 322
+ G+DT + L
Sbjct: 2938 EVAAGGIDTLVLRGGTVLATAATITLGTEVDNLDASATGMTLLNLTGNALANFMKGNSAN 2997
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N + + ++ ++ + + +I G D +
Sbjct: 2998 NTLTDTAGGNDILQGFAGIDTFNDTVGNNLFDGGLGNDLITAGSGRDIIIGGQGNDTITT 3057
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSY 408
+ ++G +
Sbjct: 3058 GTGYDVIVFNKGDGQDIINASTGADN 3083
Score = 43.6 bits (101), Expect = 0.095, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 14/175 (8%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G + + + S L + N++ N+ + + N +
Sbjct: 2951 GGTVLATAATITLGTEVDNLDASATGMTLLNLTGNALANFMKGNSANNTLTDTAGGNDIL 3010
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
I++ + GN++ G N++ SG D+ G G DT I
Sbjct: 3011 QGFAGIDTFNDTVGNNLFDGGLGNDLITAGSGRDIIIGGQGNDT-----------ITTGT 3059
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
++ QD + AD I S L T S DLI +G
Sbjct: 3060 GYDVIVFNKGDGQDI---INASTGADNTISLGGNFAYSDLSLTKSTNDLILKMGA 3111
Score = 41.3 bits (95), Expect = 0.54, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 6/121 (4%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
Q + GDD+L N S G + + + G SGND
Sbjct: 1954 QVLNGGAGDDVLSGGGWALDAN------GYDSFYAGGDHFFQNMGNRSGSFLYGDSGNDT 2007
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+IG + + G+D+ +G++G DT+ A + ++ N D +
Sbjct: 2008 LIGTALADELIGGEGDDILNGAAGADTYRVLAGANQGWDTINDSGYAKTQENGELNDLDA 2067
Query: 340 D 340
Sbjct: 2068 G 2068
>gi|289627794|ref|ZP_06460748.1| Poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3)
[Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|330867311|gb|EGH02020.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 1605
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/325 (12%), Positives = 85/325 (26%), Gaps = 12/325 (3%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL +S + + ++ G+S +D ++G++ N+V G D G G
Sbjct: 1201 DLGFRGDASDNNDPTAIFESGQNEGGNIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDG 1260
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L I+ ++++
Sbjct: 1261 NDIYVVDNALDTVTESNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVI 1320
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRG 420
AS L G D+ + + + R + ++ +G D + + S
Sbjct: 1321 TGNASNNVLDGAAGADLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTL 1380
Query: 421 AAARH---YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH-FSNFGCE 476
A G + A + +
Sbjct: 1381 GANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTS 1440
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ L ++L +D ++ L A + L
Sbjct: 1441 AQQATGGSGLDTLKGTENLTGSQFADTLTGNKNANV-----LNGGSGNDTLSGGAGDDVL 1495
Query: 537 INAFADAPDLVQAGKDHFSNFGYEE 561
I + G D + E
Sbjct: 1496 IGGSGADTLIGGTGADRYVFNNSNE 1520
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/293 (15%), Positives = 89/293 (30%), Gaps = 14/293 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E ++G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMILGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + +V D + LS++ ++N+ + L+ T
Sbjct: 447 YRTATTSSTDLVTDFDISQDRIDLSNLGFTGLGSGKGGTLNISYNATLDRTYVKSLDADA 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ I D L G+D G
Sbjct: 507 SGNRFELGLSGNLKDTLNASHFIFQRVIEGTAGGDTLTGTDGNDVMN-----GNAGTDRI 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ A + L + D + N+ + +
Sbjct: 562 NGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNYNASGTKQSDTITDF 614
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/305 (15%), Positives = 82/305 (26%), Gaps = 43/305 (14%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE N + + S + E + + N
Sbjct: 1262 DIYVVDNALDTVTESNDS-PSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVI 1320
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ + AD+ G G +
Sbjct: 1321 TGNASNNVLDGAAGADLLTGGDGSDSY--------------------------------- 1347
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
Y +D+ V + Q +D A+ + + I G + N ++
Sbjct: 1348 YVDDAADRVVETNADQQVGGIDTVLSSLASYTLGANLENIVITGTGAANATGNT--LDNL 1405
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ G+D + L + LNT + + GG + E++
Sbjct: 1406 IYAGAGDNVMDGRDGNDTVSY-LFATAGVTVALNTSAQQATGGS----GLDTLKGTENLT 1460
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS D + GN NV SGND G +G D S + A N
Sbjct: 1461 GSQFADTLTGNKNANVLNGGSGNDTLSGGAGDD--VLIGGSGADTLIGGTGADRYVFNNS 1518
Query: 333 HKQDF 337
++
Sbjct: 1519 NETGL 1523
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 5/149 (3%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ D + S + K + + SG +L
Sbjct: 716 PGSFSDPDSNTLTYSATLADNSALPDWLKFDSKTLTFSGTPGGTASGLYSVLLTASDATG 775
Query: 240 KNY-----IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ I++ + ++ G E + ++++G G+D + G++ ++ +G
Sbjct: 776 ASVADSFAINVGNVTPGTLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIINGGAG 835
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
D G G DTF Y + Y+ Y
Sbjct: 836 RDALYGGDGADTFVYSTLTDSYRDYDAGG 864
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/406 (12%), Positives = 98/406 (24%), Gaps = 30/406 (7%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D E ++ T++ + G +G +
Sbjct: 1211 NNDPTAIFESGQNEGGNIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNAL 1270
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
S S+ +++ + A+ A K + N +
Sbjct: 1271 DTVTESNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLD 1330
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ T D +D V+ D ++ + T+ + V+
Sbjct: 1331 GAAGADLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTLGANLEN-IVI 1389
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+G GN+ +N+ + +G++V DG G DT Y + + +A +
Sbjct: 1390 TGTGAANATGNTLDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTSAQQATGGS- 1448
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D L E L + L + L
Sbjct: 1449 -GLDTLKGTENLTGSQ---------FADTLTGNKNANVLNGGS----------------- 1481
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
G D A R+ + + G + A+ D
Sbjct: 1482 -GNDTLSGGAGDDVLIGGSGADTLIGGTGADRYVFNNSNETGLGGLRDIINGFKAAEGDK 1540
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
++ + F + F + G+ DD
Sbjct: 1541 LDFTGFDARPDAFVFIGNAAFSANNTGELRFADGVLYGNLDDNIGA 1586
>gi|163742122|ref|ZP_02149510.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
2.10]
gi|161384452|gb|EDQ08833.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
2.10]
Length = 785
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 58/199 (29%), Gaps = 25/199 (12%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
T+Y G+D L+ G N + E + G +++ I +++
Sbjct: 321 TITAGYGDDTLYGGDGNDRLE----GLYGNDLIYAGEGDDHVFGRDQDDLIYGEGGNDTL 376
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF------------------FYYAPS 313
+GS G D V G + N++ S GND G G D F S
Sbjct: 377 IGSMGTDTVWGGAGNDILAGSQGNDEIHGGDGDDLAFIGVYEDSDRIFLDDGNDFLDGGS 436
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYED 370
Y + D L E RL + ++E +
Sbjct: 437 AGSSFYGEGGRGNDVMNSGVGNDTLLGGEGYDRLSGGTGGDSLDGGSEDDVIEGGGGADT 496
Query: 371 LIQVIGQDVFESMKHFYEF 389
LI G D F
Sbjct: 497 LIGGTGADSLYGDDDRDLF 515
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/301 (15%), Positives = 82/301 (27%), Gaps = 13/301 (4%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N A + + +V GND V+ ++ +GND +G +G DT F
Sbjct: 206 GDRVDNGDAADGSQDDVIVAGGGNDTVLAGEGDDFVDAGTGNDSVEGGAGNDTLF--GGG 263
Query: 314 YLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ ++ + + + + L + +L + +
Sbjct: 264 GRDLLQGGAGNDLLQGGIDGDTLEGGAGRDTLEGGAGNDSLSSGDDNDLLLGGDGDDTIT 323
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D G D+ Y G DD +VFG D+ Y G
Sbjct: 324 AGYGDDTLYGGDGNDRLEGLYGNDLI-----YAGEGDD--HVFGRDQDDLI--YGEGGND 374
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ A ++ L + + G D E+ + D
Sbjct: 375 TLIGSMGTDTVWGGAGNDILAGSQGNDEIHGGDGDDLAFIGVYEDSDRIFLDDGNDFLDG 434
Query: 493 DDLRNVFGSDRGAAARHYIT-HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
+ F + G + G + + L + L D G
Sbjct: 435 GSAGSSFYGEGGRGNDVMNSGVGNDTLLGGEGYDRLSGGTGGDSLDGGSEDDVIEGGGGA 494
Query: 552 D 552
D
Sbjct: 495 D 495
>gi|301762074|ref|XP_002916480.1| PREDICTED: matrix metalloproteinase-24-like [Ailuropoda
melanoleuca]
Length = 630
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 143 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 195
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 196 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 253
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 254 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 296
>gi|297458750|ref|XP_616761.4| PREDICTED: matrix metallopeptidase 24 (membrane-inserted) [Bos
taurus]
Length = 568
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 81 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 133
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 134 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 191
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 192 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 234
>gi|296199747|ref|XP_002747296.1| PREDICTED: matrix metalloproteinase-24 [Callithrix jacchus]
Length = 595
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 108 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 160
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 161 VKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 218
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 219 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 261
>gi|291388662|ref|XP_002710873.1| PREDICTED: matrix metalloproteinase 24 [Oryctolagus cuniculus]
Length = 574
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 87 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 139
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 140 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 197
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 198 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 240
>gi|281346053|gb|EFB21637.1| hypothetical protein PANDA_004527 [Ailuropoda melanoleuca]
Length = 564
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 77 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 129
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 130 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 187
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 188 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 230
>gi|217038328|gb|ACJ76621.1| matrix metalloproteinase 24 preproprotein (predicted) [Oryctolagus
cuniculus]
Length = 532
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 45 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 97
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 98 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 155
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 156 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 198
>gi|184185552|gb|ACC68950.1| matrix metalloproteinase 24 preproprotein (predicted) [Rhinolophus
ferrumequinum]
Length = 547
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 60 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 112
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 113 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 170
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 171 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 213
>gi|169731509|gb|ACA64881.1| matrix metalloproteinase 24 preproprotein (predicted) [Callicebus
moloch]
Length = 595
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 108 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 160
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 161 VKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 218
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 219 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 261
>gi|166831586|gb|ABY90111.1| matrix metalloproteinase 24 preproprotein (predicted) [Callithrix
jacchus]
Length = 564
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 77 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 129
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 130 VKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 187
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 188 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 230
>gi|281182734|ref|NP_001162479.1| matrix metalloproteinase-24 [Papio anubis]
gi|297259948|ref|XP_001100890.2| PREDICTED: matrix metalloproteinase-24 [Macaca mulatta]
gi|164623742|gb|ABY64668.1| matrix metallopeptidase 24 (predicted) [Papio anubis]
Length = 598
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 111 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 163
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 164 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 221
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 222 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 264
>gi|149733599|ref|XP_001499275.1| PREDICTED: similar to matrix metalloproteinase 24 preproprotein
(predicted) [Equus caballus]
Length = 666
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 179 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 231
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 232 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 289
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 290 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 332
>gi|297481953|ref|XP_002692352.1| PREDICTED: matrix metallopeptidase 24 (membrane-inserted) [Bos
taurus]
gi|296481308|gb|DAA23423.1| matrix metallopeptidase 24 (membrane-inserted) [Bos taurus]
Length = 596
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 109 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 161
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 162 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 219
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 220 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 262
>gi|115495469|ref|NP_034938.3| matrix metalloproteinase-24 [Mus musculus]
gi|123236166|emb|CAM22837.1| matrix metallopeptidase 24 [Mus musculus]
gi|162317834|gb|AAI56392.1| Matrix metallopeptidase 24 [synthetic construct]
Length = 618
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 131 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 183
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 184 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 241
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 242 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 284
>gi|45738071|gb|AAS75833.1| PsmE [Pseudomonas syringae]
gi|320325481|gb|EFW81544.1| Poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3)
[Pseudomonas syringae pv. glycinea str. B076]
Length = 1610
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/408 (12%), Positives = 111/408 (27%), Gaps = 25/408 (6%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL +S + + ++ G+S +D ++G++ N+V G D G G
Sbjct: 1201 DLGFRGDASDNNDPAAIFESGQNEGGNIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDG 1260
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L I+S ++++
Sbjct: 1261 NDIYVVDNALDTVTESNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINSTGNALKNVI 1320
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
AS L G D+ + + + + + D + ++
Sbjct: 1321 TGNASNNVLDGAAGADLLTGGDGSDSYY------VDDAADRVVETNADQQVGGIDTVLSS 1374
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHED-LINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
Y E A + D LI A A + + ++
Sbjct: 1375 LASYTLGANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVT 1434
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF---KALEYIASHEDLIN 538
+ + GS G + L + ++ L
Sbjct: 1435 ------VALNTSAQQATGGSGLDTLKGTENLTGSQFADTLTGNKNANVLNGGSGNDTLSG 1488
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
D + +G D + G FN + + AA +
Sbjct: 1489 GVGDDVLIGGSGAD--TLIGGTGADRYVFNNSN--ETGLGGLRDIINGFKAAEGDKLDFT 1544
Query: 599 MKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ R L + F + N + + + +L LY + +
Sbjct: 1545 GFDARPLTDAHDAFVFIGNAAFSANNTGELRF----ADGVLYGNLDDN 1588
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 16/288 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI--------GGYEKNM 260
+ G+D+ + + + ++ G +N+
Sbjct: 1242 GNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTVVSSVSWQLGANVENL 1301
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + I + G++ +V+ GN++NNV ++G D+ G G D+++ +
Sbjct: 1302 LLTGVSAI-NSTGNALKNVITGNASNNVLDGAAGADLLTGGDGSDSYYVDDAADRVVETN 1360
Query: 321 FE---NAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ I ++ +++E + ++ +++ A + G
Sbjct: 1361 ADQQVGGIDTVLSSLASYTLGANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDG 1420
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + F G++ + + D L+ A + N
Sbjct: 1421 NDTVSYL--FATAGVTVALNTSAQQATGGSGLDTLKGTENLTGSQFADTLTGNKNANVLN 1478
Query: 437 PDAF-KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ L + LI + G D + E
Sbjct: 1479 GGSGNDTLSGGVGDDVLIGGSGADTLIGGTGADRYVFNNSNETGLGGL 1526
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/293 (15%), Positives = 87/293 (29%), Gaps = 14/293 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E + G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMIFGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ +V D + LS++ ++N+ + L+ T
Sbjct: 447 YRTATTSATDLVTDFDVSQDRIDLSNLGFSGLGSGKGGTLNISYNATLDRTYVKSLDADA 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ I D L G+D G
Sbjct: 507 SGNRFELGLSGNLKDTLNASHFIFQRVIEGTAGGDTLTGTDGNDVMN-----GNAGTDRI 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ A + L + D + N+ + +
Sbjct: 562 NGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNYTASGTKQSDTITDF 614
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 32/72 (44%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G E + ++++G G+D + G++ ++ +G D G G DTF Y A
Sbjct: 793 VLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIINGGAGRDALYGGDGADTFVYSA 852
Query: 312 PSYLYKIYRFEN 323
+ Y+ Y
Sbjct: 853 LTDSYRDYDAGG 864
>gi|73992282|ref|XP_542973.2| PREDICTED: similar to Matrix metalloproteinase-24 precursor
(MMP-24) (Membrane-type matrix metalloproteinase 5)
(MT-MMP 5) (Membrane-type-5 matrix metalloproteinase)
(MT5-MMP) [Canis familiaris]
Length = 626
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 139 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 191
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 192 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 249
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 250 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 292
>gi|13929064|ref|NP_113945.1| matrix metalloproteinase-24 [Rattus norvegicus]
gi|20138812|sp|Q99PW6|MMP24_RAT RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
Full=Membrane-type matrix metalloproteinase 5;
Short=MT-MMP 5; Short=MTMMP5; AltName:
Full=Membrane-type-5 matrix metalloproteinase;
Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
Full=Processed matrix metalloproteinase-24; Flags:
Precursor
gi|12862768|dbj|BAB32589.1| membrane-type matrix metalloproteinase 5 [Rattus norvegicus]
Length = 618
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 131 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 183
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 184 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 241
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 242 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 284
>gi|332561309|ref|ZP_08415624.1| Na-Ca exchanger/integrin-beta4 [Rhodobacter sphaeroides WS8N]
gi|332274108|gb|EGJ19425.1| Na-Ca exchanger/integrin-beta4 [Rhodobacter sphaeroides WS8N]
Length = 1029
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 61/238 (25%), Gaps = 17/238 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSS 302
++ G N + E + G GND + G N++ +GND G +
Sbjct: 686 TLRGSGGNDRLIGTANAERIEGFGGNDRIEGRGGNDLLSGGAGNDLLDGGGGRDRMVGGT 745
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSI 361
G D + I + ++VERL S ++
Sbjct: 746 GNDRYIVNH--AGDSTIELAGGGIDTVQSSLSWTLAANVERLVLTGGAALSGTGNGLANL 803
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L L + G D G D G R G D
Sbjct: 804 LTGNGGANRLQGLAGNDTLNGGGGRDVMIGGTGNDTYITD---GGDTIVERAGQGVDVVR 860
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEE 477
A+ Y E L + LI G D S+ G +
Sbjct: 861 ASVSYTLGAQLETLVLTGTANLSGTGNGLSNLLIGNGGANRLSGGAGNDTLSSGGGAD 918
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/341 (12%), Positives = 81/341 (23%), Gaps = 35/341 (10%)
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + ++ ER+ +L A + L G+D
Sbjct: 684 DGTLRGSGGNDRLIGTANAERIEGFGGNDRIEGRGGNDLLSGGAGNDLLDGGGGRDRMVG 743
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ ++ + G G D ++ + E A
Sbjct: 744 GTGNDRYIVN-----------HAGDSTIELAGGGIDTVQSSLSWTLAANVERLVLTGGAA 792
Query: 443 LEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR---N 497
L + L G D + G + + Y+ D
Sbjct: 793 LSGTGNGLANLLTGNGGANRLQGLAGNDTLNGGGGRDVMIGGTGNDTYITDGGDTIVERA 852
Query: 498 VFGSDRGAAARHYITHGVKE--------GRNPDAFKALEYIASHED---LINAFADAPDL 546
G D A+ Y E + + + L +
Sbjct: 853 GQGVDVVRASVSYTLGAQLETLVLTGTANLSGTGNGLSNLLIGNGGANRLSGGAGNDTLS 912
Query: 547 VQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
G D G S FN + D + + +D ++ + G+ G G
Sbjct: 913 SGGGAD--LLIGGAGRDSFVFNTRPGPGAIDRIADFNVADDVIHLENAVFRGLPAGALRG 970
Query: 607 ISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
+ + A + ++ L+ D G G
Sbjct: 971 ------AAFASNLSGQATDAADRILYERDTGALWFDADGTG 1005
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 49/191 (25%), Gaps = 15/191 (7%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGG----VKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ G+D +D+ S S G + +
Sbjct: 818 GNDTLNGGGGRDVMIGGTGNDTYITDGGDTIVERAGQGVDVVRASVSYTLGAQLETLVLT 877
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAPSYL 315
T S G+ ++++IGN N +GND G +G D+F +
Sbjct: 878 GTANLSGTGNGLSNLLIGNGGANRLSGGAGNDTLSSGGGADLLIGGAGRDSFVFNTRPGP 937
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
I R + + D + + LR A + + +
Sbjct: 938 GAIDRIADFNVADDVIHLENAVFRGLPAGALRGAAFASNLSGQATDAADRILYERDTGAL 997
Query: 374 VIGQDVFESMK 384
D
Sbjct: 998 WFDADGTGGGA 1008
>gi|119486122|ref|ZP_01620182.1| hypothetical protein L8106_17302 [Lyngbya sp. PCC 8106]
gi|119456613|gb|EAW37742.1| hypothetical protein L8106_17302 [Lyngbya sp. PCC 8106]
Length = 2572
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/318 (15%), Positives = 86/318 (27%), Gaps = 32/318 (10%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ ++ D ++ G+G + S + LG G G
Sbjct: 2206 DVITASAGNDTLVSGDGNNLIYTGLGDDLVFSSTENDTLYGELGKDTLIGGPSGLEPIGN 2265
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
D + + + + + SFG D K +G
Sbjct: 2266 SGDQD--------ILFGDENEDWLVGSFGQDTLYSGKDD---DKAFGGKD---------- 2304
Query: 210 EVQQKDSPFIQTIYDSGGDDLL--------DLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ T+ G+D + D E + G E N T
Sbjct: 2305 DDWVMGEQGNDTVVGDMGNDTVLGGTNNLPDDPTRDTNGEDWLFGGEGNDFMDGNEANDT 2364
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ ++V G ND + G + N++ F GND G G DT
Sbjct: 2365 LVAGVGDDTVHGGKQNDWLWGEAGNDMMFGDIGNDSLCGGEGNDTLRGDQIDNGNSPSVG 2424
Query: 322 ENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
N + D L E L + K +L+ + + L+ +G D
Sbjct: 2425 ANGQQDQLSGGVGNDLLFGDEGQDTLCGGEDNDTLHGGKDDDLLKGCSGDDLLLGEMGND 2484
Query: 379 VFESMKHFYEFGLSEGRD 396
+ EG +
Sbjct: 2485 SLVGGEGNDTLTGGEGNN 2502
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 43/321 (13%), Positives = 85/321 (26%), Gaps = 36/321 (11%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + I +++V GN+++ +++ F S+ ND G G DT PS
Sbjct: 2201 GTVNDDVITASAGNDTLVSGDGNNLIYTGLGDDLVFSSTENDTLYGELGKDTLI-GGPSG 2259
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQ 373
L I + I++ S + ++ + D K + + ++
Sbjct: 2260 LEPIGNSGDQDILFGDENEDWLVGSFGQDTLYSGKDDDKAFGGKDDDWVMGEQGNDTVVG 2319
Query: 374 VIGQDVFESMK------------HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+G D EG D + D L G D
Sbjct: 2320 DMGNDTVLGGTNNLPDDPTRDTNGEDWLFGGEGNDF----MDGNEANDTLVAGVGDDTVH 2375
Query: 422 AARH----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ---VGKDHFSNFG 474
+ + G +L ++ L D + G+ + G
Sbjct: 2376 GGKQNDWLWGEAGNDMMFGDIGNDSLCGGEGNDTLRGDQIDNGNSPSVGANGQQDQLSGG 2435
Query: 475 CEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
+ L +D + G + L ++
Sbjct: 2436 VGNDLLFGDEGQDTLCGGEDNDTLHGGKDDDLLK-----------GCSGDDLLLGEMGND 2484
Query: 535 DLINAFADAPDLVQAGKDHFS 555
L+ + G ++F
Sbjct: 2485 SLVGGEGNDTLTGGEGNNYFV 2505
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 61/184 (33%), Gaps = 14/184 (7%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA--PKG 200
G +D + ND+ + V + D +G M+ + + G
Sbjct: 2350 GEGNDFMDGNEANDTLVAGVGDDTVHGGKQNDWLWGEAGNDMMFGDIGNDSLCGGEGNDT 2409
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G+ I + Q L GGV N + E ++ G E N
Sbjct: 2410 LRGDQIDNGNSPSVGANGQQD------------QLSGGVGNDLLFGDEGQDTLCGGEDND 2457
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T+ + + G SG+D+++G N+ GND G G + F S I
Sbjct: 2458 TLHGGKDDDLLKGCSGDDLLLGEMGNDSLVGGEGNDTLTGGEGNNYFVLELDSGSDWITD 2517
Query: 321 FENA 324
F+
Sbjct: 2518 FQVG 2521
>gi|126322083|ref|XP_001368525.1| PREDICTED: similar to metalloproteinase [Monodelphis domestica]
Length = 607
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 59/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|329851467|ref|ZP_08266224.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328840313|gb|EGF89885.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1399
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/357 (12%), Positives = 103/357 (28%), Gaps = 26/357 (7%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ + + G++ L G N S+ G +++ +++
Sbjct: 546 NATGNALDNALTGNSGNNRL----QGWDGNDALAGGAGNDSLSGGTGRDSLSGQDGNDTL 601
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G +GND V G + + +G+D G +G D++ + + I + +
Sbjct: 602 SGGTGNDAVTGGNGTDHLDGGTGDDTLAGGTGNDSYVVDSSA--DSIQELAGQGLDRVTS 659
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF-- 389
+++E L + + + + + + L G D +
Sbjct: 660 SASYTLAANIEELWLSAAALRATGNALNNFIAGWDNANVLDGGAGNDTLSGGFGNDTYHV 719
Query: 390 ---------GLSEGRDITFDSYLY--LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
G ++G D S + G + + + GS A + + + + +
Sbjct: 720 DSASDVVVEGGNQGIDTVVSSVSFAMAGRWIENLTLTGSANLALTGNELNNVLTGNAGHN 779
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ + + G + R F + Y+ + ++ +
Sbjct: 780 LIDGALGNDTMAGGLGDDTYVITSTGDVVIEAAGGGYDTVRITYFGNGNYVLAEGEIEAI 839
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKA---LEYIASHEDLINAFADAPDLVQAGKD 552
G +Y G + L + ++ L GKD
Sbjct: 840 ALVSAG----NYNATGNSTANTLTGNNSNNWLNGVRGNDTLEGRLGKDTLDGGDGKD 892
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 64/489 (13%), Positives = 127/489 (25%), Gaps = 21/489 (4%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E ++ + N ++ + + D G+G T + + +
Sbjct: 751 ENLTLTGSANLALTGNELNNVLTGNAGHNLIDGALGNDTMAGGLGDDTYVITSTGDVVIE 810
Query: 131 ALGLMHPG--SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
A G + G Y + L S +Y +S + G + ++ +
Sbjct: 811 AAGGGYDTVRITYFGNGNYVLAEGEIEAIALVSAGNYNATGNSTANTLTGNNSNNWLNGV 870
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ G + + + DS GD + +L G
Sbjct: 871 RGNDTLEGRLGKDTLDGGDGKDSMSGGAGDDVYYVDSAGDVVFELVGEGNDTIR---TYG 927
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S+S G + + + + ++ G+ N+ + N NN+ +G D G G DT+
Sbjct: 928 SYSLAGTEVERLHLQPASGDFTLTGNDLNNELAANGGNNLLDGGAGADTLRGGLGNDTYV 987
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
F+N I + + ++ + +
Sbjct: 988 VD--DKGDTTNDFDNGGIDLVLSSSSHTAGAYIDDVTLTGSSNANAT--------GNDLD 1037
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
L IG ++ + G D L + G+D + Y
Sbjct: 1038 NRLTGNIGNNLLNGLAGIDTLTGGLGNDTY--VIDSLSDVVNEGAAQGTDEIWSTLSYSL 1095
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G + +E +A V G G+ F
Sbjct: 1096 AGRQVETLTLLTGGAVAATGNELDNVLNGNANGNVLDGDAGADTMAGGNGQDTYFVDNSL 1155
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE--YIASHEDLINAFADAPDL 546
+ + G D+ A Y+ E + A L
Sbjct: 1156 DVIVE--ADRGGEDQVTTAFSYVLSANLERLTLTGTADVNGTGNAVSNTLTGNAGVNVLT 1213
Query: 547 VQAGKDHFS 555
G D++
Sbjct: 1214 GGLGDDYYV 1222
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 84/310 (27%), Gaps = 9/310 (2%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++ G + A + + G +GND++ G + +GND G +G D
Sbjct: 204 GGSGHDTLTGAGQADFFAGSAGNDQLSGRAGNDLLDGGDGEDWLTGGAGNDTLFGGAGSD 263
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T Y A ++ N + D ++ +E L + + + +
Sbjct: 264 TADYSAAGGAVQVDLTLNTAQNTNGG--GIDVVTGIEHLIGSAFTDLFIGTSAANRFDGG 321
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A + L G D + E G + + F + G + +
Sbjct: 322 AGADTLAGGAGDDSYVVDSAADEVIEKAGEGVDHVFAAISYALTGSFVEFLTLTGTSNIN 381
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+G+ + + A+ DL+ E F D+
Sbjct: 382 ATGNGMNNFLIGNDGNNVLDGATGHDLMAGGLGDDTYFVQAAGDNV----VEEHFAGNDT 437
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH---EDLINAFAD 542
SY + A H G + + L +
Sbjct: 438 IYSTVSYSLFGRAVETLILTGAAHSSATGNSLANVLTGNSGNNLLEGGGGKDTLTGGLGN 497
Query: 543 APDLVQAGKD 552
++ + D
Sbjct: 498 DTYVINSAGD 507
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 57/502 (11%), Positives = 117/502 (23%), Gaps = 23/502 (4%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + ++ + + + A+ + +
Sbjct: 819 VRITYFGNGNYVLAEGEIEAIALVSAGNYNATGNSTANTLTGNNSNNWLNGVRGNDTLEG 878
Query: 131 ALGLMHPGSYNGGYPVYGVDND--YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
LG +G + G D Y DS V + + Y +
Sbjct: 879 RLGKDTLDGGDGKDSMSGGAGDDVYYVDSAGDVVFELVGEGNDTIRTYGSYSLAGTEVER 938
Query: 189 VAVQKIYG-----APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY- 242
+ +Q G + T+ G+D + G N
Sbjct: 939 LHLQPASGDFTLTGNDLNNELAANGGNNLLDGGAGADTLRGGLGNDTYVVDDKGDTTNDF 998
Query: 243 ----IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
IDL S S G + + + G+ ++ + GN NN+ +G D
Sbjct: 999 DNGGIDLVLSSSSHTAGAYIDDVTLTGSSNANATGNDLDNRLTGNIGNNLLNGLAGIDTL 1058
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G G DT+ + S + + ++ + + + +
Sbjct: 1059 TGGLGNDTYVIDSLSDVVNEGAAQGTDEIWSTLSYSLAGRQVETLTLLTGGAVAATGNEL 1118
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
++L A+ L G D + + D+ ++ +
Sbjct: 1119 DNVLNGNANGNVLDGDAGADTMAGGNGQDTYFVDNSLDVIVEADRGGEDQVTTAFSYVLS 1178
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE-- 476
G L A L D ++Q D E
Sbjct: 1179 ANLERLTLTGTADVNGTGNAVSNTLTGNAGVNVLTGGLGDDYYVIQTTGDTVVELVGEGY 1238
Query: 477 -------EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
+ + S D N G+ G + G ++
Sbjct: 1239 DSVETSVTFNASGTEVDRIVLSGTDNINATGN--GLNNQLLGNAGNNLLEGGGGNDSITG 1296
Query: 530 IASHEDLINAFADAPDLVQAGK 551
++ L +
Sbjct: 1297 GIGNDILDGGTGADTLQAGSAA 1318
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 88/647 (13%), Positives = 169/647 (26%), Gaps = 73/647 (11%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
T + DHLL + DVL + +++ + + + + D
Sbjct: 42 TGDDGDDHLLGGWGSDSLSGGGGYDVLDGEFGNDVLSDSSGGSTQNGGTGFDTLTGGSDA 101
Query: 69 TFEETSIHSD-IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
H D ++ ++ ++ + D+ G + L
Sbjct: 102 DVLNGGDHGDQLEGGGGSDILTDGAAGNTDQDTLMGGAGDDILLSYGGADRVDGGAGLDA 161
Query: 128 IGHALGLMHPG-SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
+ L S + ++ + L ++ + S D G +
Sbjct: 162 VVLNLSASSQAVSLDMAQAATASGMTLDSGTVLVNIELGEITGGSGHDTLTGAGQADFFA 221
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++ G L + + T++ G D D + GG
Sbjct: 222 GSAGNDQLSGRAGNDLLDGGDGED-WLTGGAGNDTLFGGAGSDTADYSAAGGAVQVDLTL 280
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ ++ GG I T IE ++GS+ D+ IG SA N F +G D G +G D+
Sbjct: 281 NTAQNTNGGG-----IDVVTGIEHLIGSAFTDLFIGTSAANRFDGGAGADTLAGGAGDDS 335
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYT 365
+ + + E V+ A + S VE L I++ + L
Sbjct: 336 YVVDSAADEVIEKAGEGVDHVFAAISYAL-TGSFVEFLTLTGTSNINATGNGMNNFLIGN 394
Query: 366 ASYEDLIQVIGQDVFESMKHFYEF-----------GLSEGRDITFDSYLY--LGSYDDLR 412
L G D+ + G D + + Y G +
Sbjct: 395 DGNNVLDGATGHDLMAGGLGDDTYFVQAAGDNVVEEHFAGNDTIYSTVSYSLFGRAVETL 454
Query: 413 NVFGSDRGAAARHYITH--------------GVKEGRNPDAFKALEYIASHEDLINAFAD 458
+ G+ +A + + + G K+ I S D+I A
Sbjct: 455 ILTGAAHSSATGNSLANVLTGNSGNNLLEGGGGKDTLTGGLGNDTYVINSAGDVIVEGAG 514
Query: 459 APDLVQVGKDHF-----------SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
H+ G + L + G D A
Sbjct: 515 EGIDTVRASIHYTLAADSAIEAVVLTGSSKINATGNALDNALTGNSGNNRLQGWDGNDAL 574
Query: 508 RH-------YITHGVKEGRNPDAFKALEYIASHE------------------DLINAFAD 542
G D L ++ L +
Sbjct: 575 AGGAGNDSLSGGTGRDSLSGQDGNDTLSGGTGNDAVTGGNGTDHLDGGTGDDTLAGGTGN 634
Query: 543 APDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSA 589
+V + D + +T + L + + + + A
Sbjct: 635 DSYVVDSSADSIQELAGQGLDRVTSSASYTLAANIEELWLSAAALRA 681
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 52/368 (14%), Positives = 83/368 (22%), Gaps = 28/368 (7%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G+ GND G S N+ +SG D G G D + ++
Sbjct: 6 TGTPGNDTYTGTSDNDTLNGNSGQDSLQGGFGDDLV----------TGDDGDDHLLGGWG 55
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ L + S ++ L DV H +
Sbjct: 56 SDSLSGGGGYDVLDGEFGNDVLSDSSGGSTQNGGTGFDTLTGGSDADVLNGGDHGDQLEG 115
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
G DI D D L G D + G + +
Sbjct: 116 GGGSDILTDGAAGNTDQDTLMGGAGDDILLSYGGADRVDGGAGLDAVVLNLSASSQAVSL 175
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
+ A A + N E + L D F + +
Sbjct: 176 DMAQAATASGMTLDSGTVLVNIELGEITGGSGHDTLTGAGQAD----FFAGSAGNDQLSG 231
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
G D L A ++ L A G ++ + L
Sbjct: 232 RAGNDLLDGGDGEDWLTGGAGNDTLFGGAGSDTADYSAA-----------GGAVQVDLTL 280
Query: 572 YLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLS 631
N G D +H I + + +F + D S
Sbjct: 281 NTAQNT---NGGGIDVVTGIEHLIGSAFTDLFIGTSAANRFDGGAGADTLAGGAGDDSYV 337
Query: 632 FDHKKVDL 639
D ++
Sbjct: 338 VDSAADEV 345
>gi|289651269|ref|ZP_06482612.1| Poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3)
[Pseudomonas syringae pv. aesculi str. 2250]
Length = 1605
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/325 (12%), Positives = 85/325 (26%), Gaps = 12/325 (3%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL +S + + ++ G+S +D ++G++ N+V G D G G
Sbjct: 1201 DLGFRGDASDNNDPTAIFESGQNEGGNIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDG 1260
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L I+ ++++
Sbjct: 1261 NDIYVVDNALDTVTESNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVI 1320
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRG 420
AS L G D+ + + + R + ++ +G D + + S
Sbjct: 1321 TGNASNNVLDGAAGADLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTL 1380
Query: 421 AAARH---YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH-FSNFGCE 476
A G + A + +
Sbjct: 1381 GANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTS 1440
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ L ++L +D ++ L A + L
Sbjct: 1441 AQQATGGSGLDTLKGTENLTGSQFADTLTGNKNANV-----LNGGSGNDTLSGGAGDDVL 1495
Query: 537 INAFADAPDLVQAGKDHFSNFGYEE 561
I + G D + E
Sbjct: 1496 IGGSGADTLIGGTGADRYVFNNSNE 1520
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/293 (15%), Positives = 89/293 (30%), Gaps = 14/293 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E ++G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMILGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + +V D + LS++ ++N+ + L+ T
Sbjct: 447 YRTATTSSTDLVTDFDISQDRIDLSNLGFTGLGSGKGGTLNISYNATLDRTYVKSLDADA 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ I D L G+D G
Sbjct: 507 SGNRFELGLSGNLKDTLNASHFIFQRVIEGTAGGDTLTGTDGNDVMN-----GNAGTDRI 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ A + L + D + N+ + +
Sbjct: 562 NGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNYNASGTKQSDTITDF 614
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/305 (15%), Positives = 82/305 (26%), Gaps = 43/305 (14%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE N + + S + E + + N
Sbjct: 1262 DIYVVDNALDTVTESNDS-PSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVI 1320
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ + AD+ G G +
Sbjct: 1321 TGNASNNVLDGAAGADLLTGGDGSDSY--------------------------------- 1347
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
Y +D+ V + Q +D A+ + + I G + N ++
Sbjct: 1348 YVDDAADRVVETNADQQVGGIDTVLSSLASYTLGANLENIVITGTGAANATGNT--LDNL 1405
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ G+D + L + LNT + + GG + E++
Sbjct: 1406 IYAGAGDNVMDGRDGNDTVSY-LFATAGVTVALNTSAQQATGGS----GLDTLKGTENLT 1460
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS D + GN NV SGND G +G D S + A N
Sbjct: 1461 GSQFADTLTGNKNANVLNGGSGNDTLSGGAGDD--VLIGGSGADTLIGGTGADRYVFNNS 1518
Query: 333 HKQDF 337
++
Sbjct: 1519 NETGL 1523
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 5/149 (3%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ D + S + K + + SG +L
Sbjct: 716 PGSFSDPDSNTLTYSATLADNSALPDWLKFDSKTLTFSGTPGGTASGLYSVLLTASDATG 775
Query: 240 KNY-----IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ I++ + ++ G E + ++++G G+D + G++ ++ +G
Sbjct: 776 ASVADSFAINVGNVTPGTLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIINGGAG 835
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
D G G DTF Y + Y+ Y
Sbjct: 836 RDALYGGDGADTFVYSTLTDSYRDYDAGG 864
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/406 (12%), Positives = 98/406 (24%), Gaps = 30/406 (7%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D E ++ T++ + G +G +
Sbjct: 1211 NNDPTAIFESGQNEGGNIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDGNDIYVVDNAL 1270
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
S S+ +++ + A+ A K + N +
Sbjct: 1271 DTVTESNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVITGNASNNVLD 1330
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ T D +D V+ D ++ + T+ + V+
Sbjct: 1331 GAAGADLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTLGANLEN-IVI 1389
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+G GN+ +N+ + +G++V DG G DT Y + + +A +
Sbjct: 1390 TGTGAANATGNTLDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTSAQQATGGS- 1448
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D L E L + L + L
Sbjct: 1449 -GLDTLKGTENLTGSQ---------FADTLTGNKNANVLNGGS----------------- 1481
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
G D A R+ + + G + A+ D
Sbjct: 1482 -GNDTLSGGAGDDVLIGGSGADTLIGGTGADRYVFNNSNETGLGGLRDIINGFKAAEGDK 1540
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
++ + F + F + G+ DD
Sbjct: 1541 LDFTGFDARPDAFVFIGNAAFSANNTGELRFADGVLYGNLDDNIGA 1586
>gi|12643347|sp|Q9R0S2|MMP24_MOUSE RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
Full=Matrix metalloproteinase-21; Short=MMP-21; AltName:
Full=Membrane-type matrix metalloproteinase 5;
Short=MT-MMP 5; Short=MTMMP5; AltName:
Full=Membrane-type-5 matrix metalloproteinase;
Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
Full=Processed matrix metalloproteinase-24; Flags:
Precursor
gi|5689227|dbj|BAA82966.1| membrane-type-5 matrix metalloproteinase [Mus musculus]
Length = 618
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 131 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 183
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 184 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 241
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 242 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 284
>gi|119490760|ref|ZP_01623092.1| lipoprotein receptor-related protein [Lyngbya sp. PCC 8106]
gi|119453744|gb|EAW34902.1| lipoprotein receptor-related protein [Lyngbya sp. PCC 8106]
Length = 3477
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 76/270 (28%), Gaps = 24/270 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ ++ + + I +T + G + I
Sbjct: 3156 FDPSNLIPTIAFPDLQPPNLNISTSSEPTDNVDAIIASTTETGIVFGLQGGDYIQGTENN 3215
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G+ ND + N+ +D SG D + F N
Sbjct: 3216 DEINGNEDNDFIDAKDGNDTILGGKNDDQIRSGSGND-------------WTFGNLGNDI 3262
Query: 329 DANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ + D+++ E + A + K + A + + +G D+ E +
Sbjct: 3263 LSGDRDHDWINGNEDEDLIDGAGGEDEIYGGKNDDQVRGGAQDDTMFGNLGADLIEGNED 3322
Query: 386 FYEFGLSEGRDITFD----SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
++ D ++Y G +DL + D + +G +
Sbjct: 3323 NDILFGNQDNDTISGNSEQDFIYGGQGNDLLDGNSGDDVL----FGDNGDDTLDGGEGDD 3378
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFS 471
L ++ L+ A + G D F
Sbjct: 3379 QLTGGNGNDLLVGAIGADTLVGGDGNDRFV 3408
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 85/239 (35%), Gaps = 16/239 (6%)
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G + NG +D ND+ L + S D +FG ++S
Sbjct: 3211 GTENNDEINGNEDNDFIDAKDGNDTILGGKNDDQIRSGSGNDWTFGNLGNDILSGDRDHD 3270
Query: 193 KIYGAPKGSL------GNNIYKI--EVQQKDSPFIQTIYDSGGDDLL------DLTLIGG 238
I G L + IY + Q + T++ + G DL+ D+
Sbjct: 3271 WINGNEDEDLIDGAGGEDEIYGGKNDDQVRGGAQDDTMFGNLGADLIEGNEDNDILFGNQ 3330
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ I N+E I G + N + ++ + + G +G+D + G ++ +GND+
Sbjct: 3331 DNDTISGNSEQ-DFIYGGQGNDLLDGNSGDDVLFGDNGDDTLDGGEGDDQLTGGNGNDLL 3389
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G+ G DT + + + ++ D +D + L F + S+
Sbjct: 3390 VGAIGADTLVGGDGNDRFVLVVGYGVDLITD-FVDGEDVIVLDGGLTFEQLTLTSIENS 3447
Score = 44.8 bits (104), Expect = 0.045, Method: Composition-based stats.
Identities = 29/256 (11%), Positives = 60/256 (23%), Gaps = 43/256 (16%)
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILE 363
+ + ++ + + D ++ E F D + K +
Sbjct: 3189 AIIASTTETGIVFGLQGGDYI--QGTENNDEINGNEDNDFIDAKDGNDTILGGKNDDQIR 3246
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT----FDSYLYLGSYDDLRNVFGSDR 419
+ + +G D+ + +E D+ + +Y G DD D
Sbjct: 3247 SGSGNDWTFGNLGNDILSGDRDHDWINGNEDEDLIDGAGGEDEIYGGKNDDQVRGGAQDD 3306
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ G + L ++ + G D
Sbjct: 3307 TM----FGNLGADLIEGNEDNDILFGNQDNDTISGNSEQDFIYGGQGNDLLDGNSG---- 3358
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
D L+ + DD + D L ++ L+ A
Sbjct: 3359 ----DDVLFGDNGDDTLDGGEGD----------------------DQLTGGNGNDLLVGA 3392
Query: 540 FADAPDLVQAGKDHFS 555
+ G D F
Sbjct: 3393 IGADTLVGGDGNDRFV 3408
>gi|224046469|ref|XP_002199883.1| PREDICTED: matrix metalloproteinase 16 [Taeniopygia guttata]
Length = 609
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 58/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-- 75
L Q W + I Y +T + ++ R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DAETRKAIRRAFDVWQNVTPLTFEEVPYIE 174
Query: 76 ------HSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|170747994|ref|YP_001754254.1| glycosyl transferase family protein [Methylobacterium radiotolerans
JCM 2831]
gi|170654516|gb|ACB23571.1| glycosyl transferase family 2 [Methylobacterium radiotolerans JCM
2831]
Length = 1313
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 63/224 (28%), Gaps = 30/224 (13%)
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFAD 458
D YL DL HY+ G +EGR P F L Y + A +
Sbjct: 150 DGAFYLAGNPDLAAA----GVDPVDHYMASGWREGREPAPQFDTLAY-CLTRGITFATQN 204
Query: 459 AP------DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD--LRNVFGSDRGAAARHY 510
+ E FD+ Y + + G+ A RHY
Sbjct: 205 PLVHYVLHGGPARPDPDAALILRIETLAPYFDAAHYRQRLPEPQAEALAGASDAALLRHY 264
Query: 511 ITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE------EGR 563
+ G + P F Y+ + A +D P + G E
Sbjct: 265 VAEGWRARIGPRPDFDPAGYVQARAG-SRAVSDDPFFRYVAET--RLSGGEPFAAPHRLN 321
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
+ D Y +Y D+ H+ G +E R G
Sbjct: 322 LPAVDADWYRATYPDV------GGREPFLHFAEAGWRELRDPGP 359
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 57/300 (19%), Positives = 81/300 (27%), Gaps = 31/300 (10%)
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--- 384
Y +SD R+ + S + D +
Sbjct: 284 YVQARAGSRAVSDDPFFRYVAETRLSGGEPFAAPHRLNLPAVDADWYRATYPDVGGREPF 343
Query: 385 -HFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
HF E G E RD + L LR A I G R+
Sbjct: 344 LHFAEAGWRELRDPGPGRSTLAALLRVCGLRPARAPVEDTAWLGAIGQG-ALDRDALLDL 402
Query: 442 ALEYIASHEDLINAFADAPDLVQV-GKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNV 498
+A H D A + + G +GR FD Y ++ +R
Sbjct: 403 QARLVAGHFDHGFYRARYGLSEADDAVRDYCDTGWRKGRNPRPDFDGQAYADAHPGMRET 462
Query: 499 F--------------GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
G+D A A H +G + R +A D P
Sbjct: 463 GLAPLVHRLATALMHGTDIAAGAFHPR-YGTPDSREAALADEARTVAPFFDAAFYAKRNP 521
Query: 545 DLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
D A HF +G EGR + F+ Y +Y L + HY+ G G
Sbjct: 522 DAADAPLAHFVAYGQHEGRDPSKTFSIAFYRETYGHLLAP----GESPFLHYVRTGRTAG 577
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/227 (19%), Positives = 61/227 (26%), Gaps = 40/227 (17%)
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGS 417
Y A DL G D + H+ G EGR+ FD+ Y L
Sbjct: 150 DGAFYLAGNPDL-AAAGVDPVD---HYMASGWREGREPAPQFDTLAYC-----LTRGITF 200
Query: 418 DRGAAARHYITHGVKEGRNPDA------------FKALEYIASHEDLINAFADAPDLVQV 465
HY+ HG +PDA F A Y +
Sbjct: 201 ATQNPLVHYVLHGGPARPDPDAALILRIETLAPYFDAAHYRQRLPEPQAEALAGASD-AA 259
Query: 466 GKDHFSNFGCEE--GRFVTFDSYLYLGSYDDLRNV-----FGSDRGAAARHYITHGVKEG 518
H+ G G FD Y+ + R V F
Sbjct: 260 LLRHYVAEGWRARIGPRPDFDPAGYVQARAGSRAVSDDPFFRYVAETRLSGGEPFAAPHR 319
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
N A A Y A++ D+ + HF+ G+ E R
Sbjct: 320 LNLPAVDADWYRATYPDVG---------GREPFLHFAEAGWRELRDP 357
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 47/242 (19%), Positives = 71/242 (29%), Gaps = 55/242 (22%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY--------- 445
D+ Y +Y D+ H+ G +E R+P ++
Sbjct: 321 NLPAVDADWYRATYPDV------GGREPFLHFAEAGWRELRDPGPGRSTLAALLRVCGLR 374
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
A A+ A + +D + FD Y Y S+
Sbjct: 375 PARAPVEDTAWLGAIGQGALDRDALLDL-QARLVAGHFDHGFYRARYG------LSEADD 427
Query: 506 AARHYITHGVKEGRNPD-AFKALEYIASHED------------LINAFADAPDLVQAGKD 552
A R Y G ++GRNP F Y +H L A D + AG
Sbjct: 428 AVRDYCDTGWRKGRNPRPDFDGQAYADAHPGMRETGLAPLVHRLATALMHGTD-IAAGAF 486
Query: 553 HFSNFG---------YEEGRS--ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
H +G +E R+ F+ Y D A H++ +G E
Sbjct: 487 HPR-YGTPDSREAALADEARTVAPFFDAAFYAKRNPDAA-------DAPLAHFVAYGQHE 538
Query: 602 GR 603
GR
Sbjct: 539 GR 540
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 43/182 (23%)
Query: 420 GAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
R Y+ HG + GR+P F + Y+A+H + A + + + E
Sbjct: 72 ADPVRDYLVHGWRAGRDPRPDFDSAAYLAAHPHIARAGINPLLHALARRRGGAGGEGEAA 131
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
D A H + R Y+A + DL
Sbjct: 132 ALPRPD--------------------TAEAH------RLARRLV--DGAFYLAGNPDLAA 163
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
A P DH+ G+ EGR F+ Y L HY+
Sbjct: 164 A-GVDP------VDHYMASGWREGREPAPQFDTLAYC-----LTRGITFATQNPLVHYVL 211
Query: 597 HG 598
HG
Sbjct: 212 HG 213
>gi|148674197|gb|EDL06144.1| matrix metallopeptidase 24 [Mus musculus]
Length = 570
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 83 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 135
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 136 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 193
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 194 ANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 236
>gi|113475552|ref|YP_721613.1| peptidase S1 and S6, chymotrypsin/Hap [Trichodesmium erythraeum
IMS101]
gi|110166600|gb|ABG51140.1| peptidase S1 and S6, chymotrypsin/Hap [Trichodesmium erythraeum
IMS101]
Length = 588
Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 66/238 (27%), Gaps = 18/238 (7%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG----DDLLDLTLIGGVKNYID 244
+A YG G ++ + I S D+ L+L G +
Sbjct: 234 IAGITSYGFSSGMYDTDVDDESGNSNFGEYSVDIRVSAYIEFITDITSLSLEGSRGDDTI 293
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+I G + + + +VGS GND ++G + +++ G D +G +G
Sbjct: 294 KGGIGNDTINGASGQDRLLGKSGNDFLVGSFGNDALLGEAGDDILKGGGGRDRLNGGTGN 353
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT + + D L+ L
Sbjct: 354 DTLTGDGGNDRL----NGSGGNDRLNGNTGNDILTG------GGGNDRLNGGGGNDRLNG 403
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L G D + G DI G D L G+DR
Sbjct: 404 NTGNDILTGGGGNDRLNGGGGNDRLNGNNGNDIL----TGGGGNDRLNGGGGNDRLNG 457
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 78/266 (29%), Gaps = 23/266 (8%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D + +SN G S Y I + G TI I A G
Sbjct: 252 DDESGNSNFGEYSVDIRVSAYIEFITDITSLSLEGSRGDDTIKGGIGNDTINGASGQDRL 311
Query: 138 GSYNGGYPVYGV-DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+G + G ND ++ +D + + T G
Sbjct: 312 LGKSGNDFLVGSFGNDALLGEAGDDILKGGGGRDRLNGGTG--NDTLTGDGGNDRLNGSG 369
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
GN + GG+D L+ G N I + G
Sbjct: 370 GNDRLNGNT---GNDILTGGGGNDRLNGGGGNDRLN----GNTGNDILTGGGGNDRLNGG 422
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N + + + + G GND + G N+ +GND+ G G D F +
Sbjct: 423 GGNDRLNGNNGNDILTGGGGNDRLNGGGGNDRLNGGAGNDILIGGGGNDRFIF------- 475
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVE 342
N+ +D+N+ D + + E
Sbjct: 476 ------NSNEKFDSNDFGIDTIKNFE 495
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 45/352 (12%), Positives = 84/352 (23%), Gaps = 18/352 (5%)
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
DG T + ++ E+ + + +E + +
Sbjct: 229 FIDGKIAGITSYGFSSGMYDTDVDDESGNSNFGEYSVDIRVSAYIEFIT-DITSLSLEGS 287
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ ++ + + GQD S G D DD+ G
Sbjct: 288 RGDDTIKGGIGNDTINGASGQDRLLGKSGNDFLVGSFGNDALLGEA-----GDDILKGGG 342
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
G L ++ L + G D + G
Sbjct: 343 GRDRLN----GGTGNDTLTGDGGNDRLNGSGGNDRLNGNTGNDILTGGGGNDRLNGGGGN 398
Query: 477 E--GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
+ D G D L G+DR +G L ++
Sbjct: 399 DRLNGNTGNDILTGGGGNDRLNGGGGNDRLN-----GNNGNDILTGGGGNDRLNGGGGND 453
Query: 535 DLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVF-GSDRSAAAQH 593
L + + G D F E+ S F D DL GS
Sbjct: 454 RLNGGAGNDILIGGGGNDRFIFNSNEKFDSNDFGIDTIKNFEPDLRPDEDGSQGDLIVLD 513
Query: 594 YITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFG 645
+ + + + S D ++ + ++ + +L+ G
Sbjct: 514 KSSFTDLGSSTRIGFSVDSDFEIVNTNNSIDDSNAFIVYNEESGNLFYKSDG 565
>gi|89053858|ref|YP_509309.1| hemolysin-type calcium-binding protein [Jannaschia sp. CCS1]
gi|88863407|gb|ABD54284.1| Hemolysin-type calcium-binding protein [Jannaschia sp. CCS1]
Length = 757
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 79/284 (27%), Gaps = 17/284 (5%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN-NIYKIEVQQKDSPFIQTIYDSGGDDL 230
+ + ++V + YG + G +T G D
Sbjct: 460 DPNGDGVFSIDLNPYEVVQLTFQYGYMHSTGGTLTSNTGTTVDGGGAPGETFIRGDGADT 519
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ ++ID + G N T+ +++ G +G+D++ GN ++
Sbjct: 520 VY---GTDGADWIDGGNG-NDLLAGEGGNDTLIGGGSADTLNGGAGDDMLHGNWGRDLIN 575
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-- 348
G+D + DT ++ +++ + D + + D
Sbjct: 576 GDDGDDTAYAGTMDDTV--NGGLGDDSLFGGTGNDVLHGDSGRDVLNGQDGDDALYGDMD 633
Query: 349 --------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
L+ A + L G D FG G
Sbjct: 634 NDALNGGLGNDTLSGGTGNDALDGGAGSDFLDGGAGDDTLFGNADADVFGFDAGHGHDTI 693
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ ++ ++ G R + ++ V++G +
Sbjct: 694 GDFDAQNDLEVIDLSGVGRFNSFDDVASNMVEDGTGVTIVTSSF 737
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 62/188 (32%), Gaps = 8/188 (4%)
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
+G VYG D D + + + + + + +G
Sbjct: 514 GDGADTVYGTDGADWIDGGNGNDLLAGEGGNDTLIGGGSADTLNGGAGDDMLHGNWGRDL 573
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + + T+ GDD +L GG N + + G + +
Sbjct: 574 INGDD----GDDTAYAGTMDDTVNGGLGDD----SLFGGTGNDVLHGDSGRDVLNGQDGD 625
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +++ G GND + G + N+ +G+D DG +G DT F A + ++
Sbjct: 626 DALYGDMDNDALNGGLGNDTLSGGTGNDALDGGAGSDFLDGGAGDDTLFGNADADVFGFD 685
Query: 320 RFENAIIV 327
+
Sbjct: 686 AGHGHDTI 693
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 57/248 (22%), Gaps = 11/248 (4%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV--ERLRFADQCIDSVNVKQRSILE 363
TF Y V + F+ + + D +L
Sbjct: 480 TFQYGYMHSTGGTLTSNTGTTVDGGGAPGETFIRGDGADTVYGTDGADWIDGGNGNDLLA 539
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSD- 418
+ LI D + GRD+ D Y G+ DD N D
Sbjct: 540 GEGGNDTLIGGGSADTLNGGAGDDMLHGNWGRDLINGDDGDDTAYAGTMDDTVNGGLGDD 599
Query: 419 ---RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
G ++ N Y D +N L + + G
Sbjct: 600 SLFGGTGNDVLHGDSGRDVLNGQDGDDALYGDMDNDALNGGLGNDTLSGGTGNDALDGGA 659
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
L D +VFG D G + + S +D
Sbjct: 660 GSDFLDGGAGDDTLFGNAD-ADVFGFDAGHGHDTIGDFDAQNDLEVIDLSGVGRFNSFDD 718
Query: 536 LINAFADA 543
+ + +
Sbjct: 719 VASNMVED 726
Score = 39.0 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 40/304 (13%), Positives = 75/304 (24%), Gaps = 54/304 (17%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
L + + G D + G D +
Sbjct: 493 LTSNTGTTVDGGGAPGETFIRGDGADTVYGTDGADWIDGGNGNDLLAGEGGNDTL----I 548
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
GS D L G D + ++ N D Y + +D +N L
Sbjct: 549 GGGSADTLNGGAGDDMLHG------NWGRDLINGDDGDDTAYAGTMDDTVNGGLGDDSLF 602
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
+ + + GR V Y D+
Sbjct: 603 GGTGNDVLH--GDSGRDVLNGQDGDDALYGDM---------------------------D 633
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHF-------SNFGYEEGRSITFNP------- 569
AL ++ L + AG D + FG + F+
Sbjct: 634 NDALNGGLGNDTLSGGTGNDALDGGAGSDFLDGGAGDDTLFGNADADVFGFDAGHGHDTI 693
Query: 570 -DLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADL 628
D + ++ ++ G R + ++ +++G + I F S+ ++ D
Sbjct: 694 GDFDAQNDLEVIDLSGVGRFNSFDDVASNMVEDGTGVTIVTSSFSSIFLTGVEAADLDAN 753
Query: 629 SLSF 632
F
Sbjct: 754 DFIF 757
>gi|162148075|ref|YP_001602536.1| glycosyl transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786652|emb|CAP56235.1| putative glycosyl transferase [Gluconacetobacter diazotrophicus PAl
5]
Length = 1075
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 70/218 (32%), Gaps = 36/218 (16%)
Query: 381 ESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNP 437
+ + +F +FG+ G FD Y ++ D+ + HY+T G +
Sbjct: 149 DVVAYFRDFGIGLGHSPNPFFDEAWYRTAHPDIARLIADGVVQNGFVHYLTTGFADRSPH 208
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR------------------ 479
F + Y +H DL + DH+ G G
Sbjct: 209 WLFDSGLYRRAHPDLSPEGLA-IRGYRNLYDHYLEVGDPSGLRGQWLFDPSGRFRQVAAS 267
Query: 480 ----------FVTFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA-FKAL 527
FD+ YL +Y ++ + + + A HY+ + F
Sbjct: 268 LPHVAPTLSLSPCFDAIWYLKTYPEVAALIAAGAYSCALHHYLANPTPTRFCATPWFSED 327
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
Y +ED+ +A + G +HF FG E R
Sbjct: 328 YYRVFYEDVDSALRNGTFRT--GYEHFLEFGLREWRRP 363
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 81/243 (33%), Gaps = 45/243 (18%)
Query: 399 FDSYLYLGSYDDLRN---VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
FD Y +Y + G D A + G+ G +P+ F Y +H D+
Sbjct: 126 FDPDWYRAAYPFVAEQMVFLGCDDVVAY--FRDFGIGLGHSPNPFFDEAWYRTAHPDIAR 183
Query: 455 AFADAPDLVQVGKDHFSNFGCEE-GRFVTFDSYLYLGSYDDLRNVFGSDRGAA--ARHYI 511
AD G H+ G + FDS LY ++ DL + RG HY+
Sbjct: 184 LIADGVVQ--NGFVHYLTTGFADRSPHWLFDSGLYRRAHPDLSPEGLAIRGYRNLYDHYL 241
Query: 512 THGVKEGR------NPDA---------------------FKALEYIASHEDLINAFADAP 544
G G +P F A+ Y+ ++ ++ A
Sbjct: 242 EVGDPSGLRGQWLFDPSGRFRQVAASLPHVAPTLSLSPCFDAIWYLKTYPEVAALIAA-- 299
Query: 545 DLVQAGKDHFSNFGYEEGR---SITFNPDLYLTSYDDLWNVFGSD-RSAAAQHYITHGMK 600
H+ R + F+ D Y Y+D+ + + +H++ G++
Sbjct: 300 GAYSCALHHYLAN-PTPTRFCATPWFSEDYYRVFYEDVDSALRNGTFRTGYEHFLEFGLR 358
Query: 601 EGR 603
E R
Sbjct: 359 EWR 361
>gi|291388244|ref|XP_002710723.1| PREDICTED: matrix metalloproteinase 16 [Oryctolagus cuniculus]
Length = 607
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 59/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|281343872|gb|EFB19456.1| hypothetical protein PANDA_014527 [Ailuropoda melanoleuca]
Length = 446
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 62/196 (31%), Gaps = 54/196 (27%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIH 76
L W + Y+ + + ++ AL WS+V LTF E H
Sbjct: 61 LSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALQVWSEVTPLTFTEVHEGH 113
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G +GT L
Sbjct: 114 ADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGNNQGTDLL 171
Query: 122 HNALHEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
A HE GH LGL H P + P Y +F Y
Sbjct: 172 QVAAHEFGHVLGLQHTPAAKALMSPFY----------------------------TFRYP 203
Query: 181 ATPMVSDIVAVQKIYG 196
+ D +Q +YG
Sbjct: 204 LSLSPDDRRGIQHLYG 219
>gi|209528338|ref|ZP_03276793.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209491229|gb|EDZ91629.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 674
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 53/159 (33%), Gaps = 22/159 (13%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ A+Q G +G+ + + +I G+D L L
Sbjct: 276 VTAIQGR-GGNDTLVGD---QFDQTLDGGTGNDSILGGSGNDTL-------------LGG 318
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G N + + + G G+D + G+ ++ F ++GND G +G D F
Sbjct: 319 PGDDILFGGPGNDLLYGGADNDILYGGKGDDFLSGDDGDDTLFGNAGNDTLFGGAGNDVF 378
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
Y + + ++ D L D E F
Sbjct: 379 AYIS-----RSQITTGTDLILDFTPGSDRLLFDREEFGF 412
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 9/151 (5%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
F T+ D I ++ G + + T+ T +S++G
Sbjct: 249 GSGSFDYTLRDRHNQFATATATISFQPVTAIQGRGGNDTLVGDQFDQTLDGGTGNDSILG 308
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAII 326
SGND ++G +++ F GND+ G + D + ++
Sbjct: 309 GSGNDTLLGGPGDDILFGGPGNDLLYGGADNDILYGGKGDDFLSGDDGDDTLFGNAGNDT 368
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++ D + + R + ++
Sbjct: 369 LFGG--AGNDVFAYISRSQITTGTDLILDFT 397
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 31/133 (23%), Gaps = 37/133 (27%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G GND ++G+ + +GND G SG DT
Sbjct: 279 IQGRGGNDTLVGDQFDQTLDGGTGNDSILGGSGNDT------------------------ 314
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
L +L A + L G D
Sbjct: 315 -------------LLGGPGDDILFGGPGNDLLYGGADNDILYGGKGDDFLSGDDGDDTLF 361
Query: 391 LSEGRDITFDSYL 403
+ G D F
Sbjct: 362 GNAGNDTLFGGAG 374
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 45/184 (24%), Gaps = 19/184 (10%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E + + GN + N + + G + DT R +
Sbjct: 215 EKAITNIGN---VSNGSATILPGGVGVEFI-----PDTTSLGGSGSFDYTLRDRHNQ--- 263
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
A V ++ V + L+ + ++ G D
Sbjct: 264 FATATATISFQPVTAIQGRGGNDTLVGDQFDQTLDGGTGNDSILGGSGNDTLLGGPGDDI 323
Query: 389 FGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G D+ + + LY G DD + D + G
Sbjct: 324 LFGGPGNDLLYGGADNDILYGGKGDDFLSGDDGDDTL----FGNAGNDTLFGGAGNDVFA 379
Query: 445 YIAS 448
YI+
Sbjct: 380 YISR 383
Score = 39.0 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 53/346 (15%), Positives = 87/346 (25%), Gaps = 28/346 (8%)
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + N I+ +E + + ++ F V + + A+
Sbjct: 143 FNEFRRFSTTLPRNTGIIAIGSEATELAIDNIRISYFTTSTPSLVVGTENNDF-LQAAEP 201
Query: 370 DLIQVIGQDVFESMKHFYEFG-LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
LI + D K G +S G + + D ++ GS
Sbjct: 202 RLIIPLPPDFIRDEKAITNIGNVSNGSATILPGGVGVEFIPDTTSLGGSG-------SFD 254
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+ +++ N A I LV D + G DS L
Sbjct: 255 YTLRDRHNQFATATATISFQPVTAIQGRGGNDTLVGDQFDQTLDGG------TGNDSILG 308
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
D L G D + G L + L D
Sbjct: 309 GSGNDTLLGGPGDDIL-----FGGPGNDLLYGGADNDILYGGKGDDFLSGDDGDDTLFGN 363
Query: 549 AGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM---KEGRAL 605
AG D + FG + +T+ DL F G
Sbjct: 364 AGND--TLFGGAGNDVFAYISRSQITTGTDLILDFTPGSDRLLFDREEFGFIQIGTTPEN 421
Query: 606 GISGMQF-KSVMNLSEKSRDKADLS--LSFDHKKVDLYTDYFGDGN 648
+S QF S L+++ + +L D G G
Sbjct: 422 ILSPEQFIFLETGEFNPDNLDTISSPILAYELQTGNLIYDPDGSGT 467
>gi|260432574|ref|ZP_05786545.1| type I secretion target repeat protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416402|gb|EEX09661.1| type I secretion target repeat protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 759
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 53/161 (32%), Gaps = 8/161 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
S ++ GDD LD GG + L + + G ++
Sbjct: 596 GNDSALGSGGDDFLFGGLGDDRLD----GGSGDDTLLAGDGDDFLFGGVGQDVLSGGAGD 651
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G GND + G N++ GND G SG D F + + I FE + +
Sbjct: 652 DLIKGGDGNDFIDGGDNNDILEGGRGNDTLVGGSGADVFVFRPGEGVDTILDFEEGLDLI 711
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ E L + +V S + A
Sbjct: 712 RIDQPG----VSFEDLTITSRDGSTVVSLDDSPVAIVAGAP 748
Score = 52.5 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 32/123 (26%), Gaps = 37/123 (30%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND +G+ ++ F G+D DG SG DT
Sbjct: 596 GNDSALGSGGDDFLFGGLGDDRLDGGSGDDT----------------------------- 626
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
L D + +L A + + G D + + G
Sbjct: 627 --------LLAGDGDDFLFGGVGQDVLSGGAGDDLIKGGDGNDFIDGGDNNDILEGGRGN 678
Query: 396 DIT 398
D
Sbjct: 679 DTL 681
>gi|118488262|gb|ABK95950.1| unknown [Populus trichocarpa]
Length = 304
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 57/180 (31%), Gaps = 19/180 (10%)
Query: 1 MHNIKPVYTTERIAD-HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW-- 57
MH+I P T H++ + N +++P +F + + R
Sbjct: 117 MHDITPNNTKSNYTKFHMVMHYTFFNGMPKWRPSKYH-LTYTFGSDGVQVVDMDTLRSVC 175
Query: 58 --ALGEWSKVVDLTFEETSIHSDIKFIS----SNNGYVCTPRYDSRYFMEIN-------- 103
A +WS V LTF+E S + + ++G +
Sbjct: 176 SDAFKKWSDVSPLTFQEASDGASANIVIAFYRGDHGDGYPFDGPGKILAHAFSPENGRFH 235
Query: 104 FDKADVWRYGIGKGTILS-HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
+D + W I A+HEIGH LGL H N + + +
Sbjct: 236 YDADEKWSTNPAMDQIDLESVAVHEIGHLLGLAHSSDSNAVMYPSIAAGTKKRNLAQDDI 295
>gi|307945682|ref|ZP_07661018.1| Na-Ca exchanger/integrin-beta4 [Roseibium sp. TrichSKD4]
gi|307771555|gb|EFO30780.1| Na-Ca exchanger/integrin-beta4 [Roseibium sp. TrichSKD4]
Length = 810
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 43/108 (39%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G N + + G G+D++ G + N++ +G D G +G D
Sbjct: 60 GNAMNNVQFGNGGNDALVGGMGNDIQFGGEGDDLIKGGAGNDIIKGGAGADTIRGGAGND 119
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
Y Y I + + +V D N D L +E+L F DQ ++
Sbjct: 120 VALYDGNRADYTIMKNGDMTLVIDNNTGATDNLKGIEQLAFTDQSVNI 167
>gi|330984908|gb|EGH83011.1| Poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3)
[Pseudomonas syringae pv. lachrymans str. M301315]
Length = 1610
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/325 (12%), Positives = 85/325 (26%), Gaps = 12/325 (3%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL +S + + ++ G+S +D ++G++ N+V G D G G
Sbjct: 1201 DLGFRGDASDNNDPAAIFESGQNEGGNIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDG 1260
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L I+ ++++
Sbjct: 1261 NDIYVVDNALDTVTESNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVI 1320
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRG 420
AS L G D+ + + + R + ++ +G D + + S
Sbjct: 1321 TGNASNNVLDGAAGADLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTL 1380
Query: 421 AAARH---YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH-FSNFGCE 476
A G + A + +
Sbjct: 1381 GANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTS 1440
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ L ++L +D ++ L A + L
Sbjct: 1441 AQQATGGSGLDTLKGTENLTGSQFADALTGNKNANV-----LNGGSGNDTLSGGAGDDVL 1495
Query: 537 INAFADAPDLVQAGKDHFSNFGYEE 561
I + G D + E
Sbjct: 1496 IGGSGADTLIGGTGADRYVFNNSNE 1520
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 81/287 (28%), Gaps = 14/287 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTL-------IGGVKNYIDLNTESWSSIGGYEKNMT 261
+ G+D+ + + +D S S G
Sbjct: 1242 GNDVLDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTVVSSVSWQLGANVENL 1301
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + G++ +V+ GN++NNV ++G D+ G G D+++ +
Sbjct: 1302 LLTGVSAINGTGNALKNVITGNASNNVLDGAAGADLLTGGDGSDSYYVDDAADRVVETNA 1361
Query: 322 E---NAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ I ++ +++E + ++ +++ A + G
Sbjct: 1362 DQQVGGIDTVLSSLASYTLGANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDGN 1421
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D + F G++ + + D L+ A + N
Sbjct: 1422 DTVSYL--FATAGVTVALNTSAQQATGGSGLDTLKGTENLTGSQFADALTGNKNANVLNG 1479
Query: 438 DAF-KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ L A + LI + G D + E
Sbjct: 1480 GSGNDTLSGGAGDDVLIGGSGADTLIGGTGADRYVFNNSNETGLGGL 1526
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/293 (15%), Positives = 88/293 (30%), Gaps = 14/293 (4%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + S ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDSFPLVTVQG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I E ++G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TDANDAITGGAANEMILGLAGKDTLNGAAGDDILVGGAGADKLTGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ +V D + LS++ ++N+ + L+ T
Sbjct: 447 YRTATTSATDLVTDFDVSQDRIDLSNLGFTGLGSGKGGTLNISYNATLDRTYVKSLDADA 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ I D L G+D G
Sbjct: 507 SGNRFELGLSGNLKDTLNASHFIFQRVIEGTAGGDTLTGTDGNDVMN-----GNAGTDRI 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ A + L + D + N+ + +
Sbjct: 562 NGGAGADLINGGADADILTGGAGGDLFIYNSRLDSYRNYNASGTKQSDTITDF 614
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 5/149 (3%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ D + S + K + + SG +L
Sbjct: 716 PGSFSDPDSNTLTYSATLADNSALPDWLKFDSKTLTFSGTPGGTASGLYSVLLTASDATG 775
Query: 240 KNY-----IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ I++ + ++ G E + ++++G G+D + G++ ++ +G
Sbjct: 776 ASVADSFAINVGNVTPGTLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIINGGAG 835
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
D G G DTF Y + Y+ Y
Sbjct: 836 RDALYGGDGADTFVYSTLTDSYRDYDAGG 864
>gi|269839029|ref|YP_003323721.1| Hemolysin-type calcium-binding region [Thermobaculum terrenum ATCC
BAA-798]
gi|269790759|gb|ACZ42899.1| Hemolysin-type calcium-binding region [Thermobaculum terrenum ATCC
BAA-798]
Length = 257
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 46/151 (30%), Gaps = 10/151 (6%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G+ N + + V G SGND + G+ N+ GN++ +G G D
Sbjct: 70 GPRGDDRLFGFAGNDNLYGGPGNDRVYGGSGNDRIYGSLGNDYLVGGPGNNMLNGGPGRD 129
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
L IY + Y ++ + V K ++
Sbjct: 130 --VLRGGFDLDVIYGSYGNDLAYGG--------KGIDYIYGGPGADTLVGGKGYDVIVGG 179
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + G D+ + EG D
Sbjct: 180 PGADVITAGEGFDIILPAAGADKVYGQEGND 210
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 52/165 (31%), Gaps = 7/165 (4%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G G+D + G + N+ + GND G SG D + + ++
Sbjct: 66 DELRGPRGDDRLFGFAGNDNLYGGPGNDRVYGGSGNDRIY--GSLGNDYLVGGPGNNMLN 123
Query: 329 DANEHKQDFLSD---VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+D L ++ + + + K + + L+ G DV
Sbjct: 124 GGP--GRDVLRGGFDLDVIYGSYGNDLAYGGKGIDYIYGGPGADTLVGGKGYDVIVGGPG 181
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
EG DI + Y N A++ Y+ G
Sbjct: 182 ADVITAGEGFDIILPAAGADKVYGQEGNDKIMLHKDASKDYVYCG 226
Score = 53.6 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 59/180 (32%), Gaps = 10/180 (5%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDL-----TLIG 237
+ +YG P + +Y + S + G+++L+ L G
Sbjct: 77 LFGFAGNDNLYGGPGN---DRVYGGSGNDRIYGSLGNDYLVGGPGNNMLNGGPGRDVLRG 133
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G + + G + I +++VG G DV++G +V G D+
Sbjct: 134 GFDLDVIYGSYGNDLAYGGKGIDYIYGGPGADTLVGGKGYDVIVGGPGADVITAGEGFDI 193
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
++G D + + +++ + VY + + D + D V
Sbjct: 194 ILPAAGADKVYGQEGNDKIMLHKDASKDYVYCGPGYDTVYTWDSKDFIADDCEDMQVLYL 253
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 50/165 (30%), Gaps = 10/165 (6%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDD 229
D FG+ + ++YG + IY P + G D
Sbjct: 73 GDDRLFGFAGNDNLYGGPGNDRVYGGSGN---DRIYGSLGNDYLVGGPGNNMLNGGPGRD 129
Query: 230 LLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+L + G N + + I G T+ + +VG G DV+
Sbjct: 130 VLRGGFDLDVIYGSYGNDLAYGGKGIDYIYGGPGADTLVGGKGYDVIVGGPGADVITAGE 189
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ ++G D G G D + + +Y VY
Sbjct: 190 GFDIILPAAGADKVYGQEGNDKIMLHKDASKDYVYCGPGYDTVYT 234
Score = 38.6 bits (88), Expect = 3.9, Method: Composition-based stats.
Identities = 14/130 (10%), Positives = 27/130 (20%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+RL + + + + + +G D GRD+
Sbjct: 72 RGDDRLFGFAGNDNLYGGPGNDRVYGGSGNDRIYGSLGNDYLVGGPGNNMLNGGPGRDVL 131
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+ Y N Y G + + + +
Sbjct: 132 RGGFDLDVIYGSYGNDLAYGGKGIDYIYGGPGADTLVGGKGYDVIVGGPGADVITAGEGF 191
Query: 459 APDLVQVGKD 468
L G D
Sbjct: 192 DIILPAAGAD 201
>gi|189520793|ref|XP_699803.3| PREDICTED: matrix metalloproteinase-24 [Danio rerio]
Length = 608
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 62/213 (29%), Gaps = 59/213 (27%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W + I Y T D Q R A W V L+F+E +
Sbjct: 120 LTGQKWRDKKITYSIHNFTPKVGEKD-------TQRAIRQAFDVWQTVTPLSFQEVAYSE 172
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 173 IKNEGKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 230
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G L A+HE+GHALGL H + + +
Sbjct: 231 ANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYME-------------------- 270
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
+ + D+ +QKIYG P L
Sbjct: 271 -----THNFKLPLDDLQGIQKIYGIPTAMLEPT 298
>gi|304414946|ref|ZP_07395793.1| RTX-like toxin [Candidatus Regiella insecticola LSR1]
gi|304283100|gb|EFL91517.1| RTX-like toxin [Candidatus Regiella insecticola LSR1]
Length = 774
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 14/116 (12%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
V +YG + + + + ++ GG+DLL GG N + E
Sbjct: 673 VHWLYGTNE----------NDEIEGNEKDDHLFGLGGNDLL----RGGAGNDLLDGGEGD 718
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G N + I+ + G +G+D + G N+ +GND G +G DT
Sbjct: 719 DILLGGTGNDHLFGGAGIDKLFGDTGDDRLYGGEGNDELSGGAGNDKLYGDAGNDT 774
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 39/124 (31%), Gaps = 10/124 (8%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + + + + G++ ND + GN ++ F GND+ G +G D
Sbjct: 661 TQGDHRLPGMNKVHWLYGTNENDEIEGNEKDDHLFGLGGNDLLRGGAGND--LLDGGEGD 718
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ ++ + +++L + L A + L
Sbjct: 719 DILLGGTGNDHLFGG--------AGIDKLFGDTGDDRLYGGEGNDELSGGAGNDKLYGDA 770
Query: 376 GQDV 379
G D
Sbjct: 771 GNDT 774
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G +N E + G N + + + G G+D+++G + N+ F +G
Sbjct: 677 YGTNENDEIEGNEKDDHLFGLGGNDLLRGGAGNDLLDGGEGDDILLGGTGNDHLFGGAGI 736
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D G +G D + ++ +Y + D
Sbjct: 737 DKLFGDTGDDRLY--GGEGNDELSGGAGNDKLY--GDAGNDT 774
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 23/80 (28%), Gaps = 4/80 (5%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF--- 399
+ ++ + +L A + L G D+ G D F
Sbjct: 684 EIEGNEKDDHLFGLGGNDLLRGGAGNDLLDGGEGDDILLGGTGNDHLFGGAGIDKLFGDT 743
Query: 400 -DSYLYLGSYDDLRNVFGSD 418
D LY G +D + +
Sbjct: 744 GDDRLYGGEGNDELSGGAGN 763
Score = 42.9 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 35/123 (28%), Gaps = 9/123 (7%)
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+H+ ++ V L ++ + ++ L + L G D+ + +
Sbjct: 660 LTQGDHRLPGMNKVHWLYGTNENDEIEGNEKDDHLFGLGGNDLLRGGAGNDLLDGGEGDD 719
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G D F D L G DR Y G E L A
Sbjct: 720 ILLGGTGNDHLFGGAGI----DKLFGDTGDDRL-----YGGEGNDELSGGAGNDKLYGDA 770
Query: 448 SHE 450
++
Sbjct: 771 GND 773
>gi|83375894|gb|ABC17785.1| matrix metalloproteinase 24 variant [Homo sapiens]
Length = 593
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 106 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 158
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 159 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 216
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 217 ANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQHMETHN 259
>gi|186682747|ref|YP_001865943.1| Na-Ca exchanger/integrin-beta4 [Nostoc punctiforme PCC 73102]
gi|186465199|gb|ACC81000.1| Na-Ca exchanger/integrin-beta4 [Nostoc punctiforme PCC 73102]
Length = 2999
Score = 75.6 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 60/405 (14%), Positives = 99/405 (24%), Gaps = 61/405 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDL---------------TLIGGVKNYIDLNTESWSSI 253
+ + G+D LD ++L S+
Sbjct: 1004 GDDNITTGEGDDFLLGGAGNDTLDGGEVGLLDTQDKNTADYSDAPNGIVVNLTQGKASND 1063
Query: 254 G--------------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
G G KN +I +VG GND +I ++V +G D D
Sbjct: 1064 GYGTQDILIHIQNIVGSSKNDSITGSDDDNVLVGDQGNDTLISLEGDDVLLSGAGADYID 1123
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVY---------------DANEHKQDFLSDVERL 344
G DT Y A + + + E D + +VE L
Sbjct: 1124 GGDDEDTITYIASMAGVYVNISNSNVAFVSPIDKVLSSLPKNRGFGGEANGDKIFNVENL 1183
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY---EFGLSEGRDITFDS 401
+ + V Q + + LI G D + ++G ++
Sbjct: 1184 QGSIYNDILVAGDQDGHVSGLNGDDILIAGPGDDTLDGGTGNDWVSYIRATQGVEVHLVE 1243
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
+ S R + ++ + + LE L
Sbjct: 1244 EDGNTDGGASGDKLLSLRNKDDEPLSINSIENLQGSNFADTLEGDIGSNILRGEGGSDTL 1303
Query: 462 LVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDL--------RNVFGSDRGAAARHYI 511
G D + + D Y S + N G +G I
Sbjct: 1304 KGNDGNDTLIGGVGADFLDGGTSIDWADYSESPGGVNVSLLPGAVNTGGHGQGDTFAQTI 1363
Query: 512 THGVKEGRNPDAF-KALEYIASHEDLINA---FADAPDLVQAGKD 552
E F L A + D+ F +G D
Sbjct: 1364 ISSTVENLLGSDFADILTGDAGNNDINPGLSNFGTDVVDGGSGSD 1408
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 50/321 (15%), Positives = 90/321 (28%), Gaps = 36/321 (11%)
Query: 102 INFDKADVWRYGIGKGTILSHNALH---EIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
+ D+ G G T+ I G+ G G D
Sbjct: 1202 SGLNGDDILIAGPGDDTLDGGTGNDWVSYIRATQGVEVHLVEEDGNTDGGASGDKLLSLR 1261
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY-GAPKGSLGNNIYKIEVQQKDSP 217
+ +S+ + A + DI + G GN+
Sbjct: 1262 NKDD--EPLSINSIENLQGSNFADTLEGDIGSNILRGEGGSDTLKGND---GNDTLIGGV 1316
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH---TVIESVVGS 274
+ D D + G N + L + ++ GG+ + T AQ + +E+++GS
Sbjct: 1317 GADFLDGGTSIDWADYSESPGGVN-VSLLPGAVNT-GGHGQGDTFAQTIISSTVENLLGS 1374
Query: 275 SGNDVVIGNSANNVFFESS---GNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-------- 323
D++ G++ NN G DV DG SG D +
Sbjct: 1375 DFADILTGDAGNNDINPGLSNFGTDVVDGGSGSDRLIIDYSRNDFGTGVIGGFSNFANPT 1434
Query: 324 ----AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ ++ERL + + A + ++ G D+
Sbjct: 1435 NSFSRGSGTNPPVQDAVTFKNIERL-------KVTGTSKADQIFGGADDDVILGGAGNDI 1487
Query: 380 FESMKHFYEFGLSEGRDITFD 400
+ +G D D
Sbjct: 1488 IAGGRGNNVILADDGNDFVKD 1508
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 69/249 (27%), Gaps = 11/249 (4%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++ + I E N + +++ G+D ++G + N+ + D
Sbjct: 983 GNDTITFINDVEANGQVTGGAGDDNITTGEGDDFLLGGAGNDTLDGGEVG-LLDTQDKN- 1040
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T Y + + QD L ++ + + + ++L
Sbjct: 1041 TADYSDAPNGIVVNLTQGKASNDGYGT--QDILIHIQNIVGSSKNDSITGSDDDNVLVGD 1098
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV-------FGSD 418
+ LI + G DV S + D G Y ++ N
Sbjct: 1099 QGNDTLISLEGDDVLLSGAGADYIDGGDDEDTITYIASMAGVYVNISNSNVAFVSPIDKV 1158
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ ++ G G + L+ ++ L+ D G D ++
Sbjct: 1159 LSSLPKNRGFGGEANGDKIFNVENLQGSIYNDILVAGDQDGHVSGLNGDDILIAGPGDDT 1218
Query: 479 RFVTFDSYL 487
+
Sbjct: 1219 LDGGTGNDW 1227
Score = 39.0 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 4/80 (5%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + + +VG +G D +IGN ++ + G+D GS+ D +
Sbjct: 1677 LNVIGTSKADQLVGGNGADTLIGNDGDDSLIGNKGSDSLFGSANNDILI----GVKLGVS 1732
Query: 320 RFENAIIVYDANEHKQDFLS 339
I +D
Sbjct: 1733 PGSGNEIDSLTGGTGKDEFW 1752
>gi|89068227|ref|ZP_01155637.1| 30S ribosomal protein S2 [Oceanicola granulosus HTCC2516]
gi|89046144|gb|EAR52202.1| 30S ribosomal protein S2 [Oceanicola granulosus HTCC2516]
Length = 620
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 56/213 (26%), Gaps = 21/213 (9%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G + + I + GDD LD + + + ++ G++ + +
Sbjct: 314 GITVTGTNGHNELQAGIGYHRGTDGDDRLDGSALSRDLIDVLEGRGGDDTLKGHDGDDQL 373
Query: 263 AQHTVIESVVGSSGNDV------------------VIGNSANNVFFESSGNDVFDGSSGL 304
+ + G G+D + G + G+D G G
Sbjct: 374 FGDDGKDKLRGGKGDDTAKGGDGRDDIKGGDGDDKLKGQDGKDKLKGEKGDDKLRGGDGN 433
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D + + + + K ++L+ L
Sbjct: 434 DKLR--GGKGEDDLKGQDGKDDLKGGRGDDKLKGGDGKDKLKGEKGDDKLRGGDGDDKLR 491
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+DL G D + KH +G D
Sbjct: 492 GGKGEDDLRGQRGDDDLKGGKHDDVLRGGKGND 524
Score = 40.9 bits (94), Expect = 0.71, Method: Composition-based stats.
Identities = 33/238 (13%), Positives = 53/238 (22%), Gaps = 46/238 (19%)
Query: 269 ESVVGSSGND-VVIGNSANNVFFESSGNDVFDGSSGLDTF-----------FYYAPSYLY 316
E++ GS V G + +N G G+ G D
Sbjct: 305 ETINGSGIPGITVTGTNGHNELQAGIGYHR--GTDGDDRLDGSALSRDLIDVLEGRGGDD 362
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVE---------------------RLRFADQCIDSVN 355
+ + ++ + +D L + +L+ D
Sbjct: 363 TLKGHDGDDQLF--GDDGKDKLRGGKGDDTAKGGDGRDDIKGGDGDDKLKGQDGKDKLKG 420
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
K L + L G+D + + G D L G D
Sbjct: 421 EKGDDKLRGGDGNDKLRGGKGEDDLKGQDGKDDLKGGRG-----DDKLKGGDGKDKLKGE 475
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
D G + R L +DL D G D
Sbjct: 476 KGDDKLR----GGDGDDKLRGGKGEDDLRGQRGDDDLKGGKHDDVLRGGKGNDRLDGG 529
>gi|189347634|ref|YP_001944163.1| Hemolysin-type calcium-binding region [Chlorobium limicola DSM 245]
gi|189341781|gb|ACD91184.1| Hemolysin-type calcium-binding region [Chlorobium limicola DSM 245]
Length = 3954
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 71/539 (13%), Positives = 138/539 (25%), Gaps = 65/539 (12%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI-------G 129
+ N Y D G G T + ++ +
Sbjct: 892 GTGAIDGTGNALNNVITGGRGYNRLDGSAGTDTLEGGSGNDTYVVDSSGDVVVEQRNSGT 951
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
+ + + + + + F S+ + D G + I
Sbjct: 952 DTVESSSDHALSENVENLILTGTSDINGFGNSLNNVIAGNDGNNLIEGGSGNDLVDGGIG 1011
Query: 190 AVQKIYGA---------------PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
A GA G+ G+ + + TI G D++
Sbjct: 1012 ADTLTGGAGNDSITGGAGDDTAIYSGNFGDYLITYDAGTSAYTIEDTIDGRDGTDVISHA 1071
Query: 235 LI-------------------GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
G + TE + G+ N +I+ +++ G S
Sbjct: 1072 EYFVFADGLKTKDELIGNNLNGTENDDTLTGTEHDDMMDGFGGNDSISGMGGNDTLYGGS 1131
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + G+ + + + G+DV DG +G D F + S ++ ++ ++
Sbjct: 1132 GNDTLYGDDGEDALYGAEGDDVMDGGAGND--FLHGDSGNDSMFGGSGNDQLHGSDGADA 1189
Query: 336 DFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ + + F + L + + G D+ + EG
Sbjct: 1190 LHGNADDDMLFGIAGDDALYGDEGSDSLHGGEGNDLVDGGTGNDLLHGNQGADTMYGGEG 1249
Query: 395 RD----ITFDSYLYLGSYDDLRNVFGSD-----RGAAARHYITHGVKEGRNPDAFKALEY 445
D Y DD G D A Y G L
Sbjct: 1250 NDSVEGGDDSDLQYGDGGDDYMEGDGGDDTIHAGEGADIVYGGDGNDSIHGNQGADTLHG 1309
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD--- 502
+ + G D+ G ++ F + +G D+ G+
Sbjct: 1310 GEGSDSVEGGDDSDLQYGDGGDDYMEGDGGDDALFGGDGNDGIIGGDDNDSVDGGAGDDM 1369
Query: 503 ---------RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ +G + +P L ++ L+ F + G D
Sbjct: 1370 IEGSDGNDTVVGGDGDDVIYGDELHDSPGGDDLLYGGDGNDILVGGFGNDSLNGGVGND 1428
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/265 (17%), Positives = 75/265 (28%), Gaps = 5/265 (1%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + T S SI G N + H +++ G G+DV+ G + N+ + GND
Sbjct: 3296 GYSNDLVQHGTSSDDSIIGTPGNDALYGHGGNDTLDGQGGDDVLDGGTGNDTLYGGEGND 3355
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G D N ++ + D + L
Sbjct: 3356 TLYGGEEADDSTGGGYRTDSLYGGAGNDVLEVSDVDGYLDGGEGDDDLSGDSGNDTMYGG 3415
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLR 412
++ + L DV EG D D L G DD
Sbjct: 3416 AGNDTIDGSDGNNYLDGGEDNDVLVGDDDRDTLIGGEGNDTLLSDKGDDSLSGGDGDDYL 3475
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ + G D L+ A ++ LI D + G D
Sbjct: 3476 HGEWGSSELDYVGTGEM-IVPGGPEDGSDTLDGGAGNDTLIGGAGDDTLIGGDGNDTAVF 3534
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRN 497
G E +T+D + + D
Sbjct: 3535 SGNYEDYTITYDVATFAYTVVDSIA 3559
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/326 (13%), Positives = 84/326 (25%), Gaps = 15/326 (4%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
++ ++ G + E +++ G + + +++ G +G DV++G N++
Sbjct: 543 IEKLILTGSDDIHGTGNELNNALTGNSGANMLDGGSGNDTLEGGAGADVLLGGIGNDLLD 602
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-Q 349
GND G G DT+ + +I + S +ERL
Sbjct: 603 GGIGNDTMQGGEGNDTYVVD--NEGDEITENAGEGTDSVQSSVSYALSSSLERLTLTGSG 660
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
++ + + A +L G D G D
Sbjct: 661 SVNGYGNDLDNAVTGNAGNNELSGSGGNDTISGGAGNDLIWGGTGNDKL--DGGIGADTM 718
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ + IT EG + ++ + + +
Sbjct: 719 TGGSGNDTYVVDNESDGITENEDEGVDNVQASVSYALSQNIEQLILTGSGSIDGTGNSSD 778
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
G G LY + +D + D G LE
Sbjct: 779 NDITGNRAGNA------LYGAAGNDTIDGGAGDDTID----GGAGNDLLEGNTGNDTLEG 828
Query: 530 IASHEDLINAFADAPDLVQAGKDHFS 555
+ L G D +
Sbjct: 829 GEGSDTLTGGSGSNMLSGGDGDDMYI 854
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/438 (12%), Positives = 114/438 (26%), Gaps = 40/438 (9%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E ++ N ++ D G G I ++
Sbjct: 652 ERLTLTGSGSVNGYGNDLDNAVTGNAGNNELSGSGGNDTISGGAGNDLIWGGTGNDKLDG 711
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+G G Y VDN+ + + +D +D + + +I
Sbjct: 712 GIGADTMTGG-SGNDTYVVDNESDGIT---------ENEDEGVDNVQASVSYALSQNIEQ 761
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ GN+ + + +Y + G+D +D
Sbjct: 762 LILTGSGSIDGTGNSS---DNDITGNRAGNALYGAAGNDTID------------------ 800
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G + TI + + G++GND + G ++ SG+++ G G D +
Sbjct: 801 ----GGAGDDTIDGGAGNDLLEGNTGNDTLEGGEGSDTLTGGSGSNMLSGGDGDDMYILE 856
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ V A+ VE L ID +++ Y
Sbjct: 857 SGDDTIIEDAEGGNDTVRTASS--HILEDGVENLVLVGTGAIDGTGNALNNVITGGRGYN 914
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G D E + + D+ + + +
Sbjct: 915 RLDGSAGTDTLEGGSGNDTYVVDSSGDVVVEQRNSGTDTVESSSDHALSENVENLILTGT 974
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYL 487
G + + + + +G D + + D+ +
Sbjct: 975 SDINGFGNSLNNVIAGNDGNNLIEGGSGNDLVDGGIGADTLTGGAGNDSITGGAGDDTAI 1034
Query: 488 YLGSYDDLRNVFGSDRGA 505
Y G++ D + + A
Sbjct: 1035 YSGNFGDYLITYDAGTSA 1052
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 56/342 (16%), Positives = 97/342 (28%), Gaps = 31/342 (9%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ LD + G I SI G N I+ T + + G +GND + G ++
Sbjct: 262 NALDNLITGNTGINILDGGAGNDSIDGGSGNDIISGETGDDQLAGGTGNDRIYGGEGDDR 321
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+G D +G SG D F D + + L D
Sbjct: 322 LDGGAGKDNLEGGSGSDQLFGNDSDDQLSGSE----------GNDALDGGTGNDSLDGGD 371
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF--GLSEGRDITFDSYLY-L 405
+ +L+ + + G D + EG D S Y L
Sbjct: 372 GDDMLLGGIGNDLLDGGIGNDMMQGGRGNDTYSVDSENDIIVENAGEGTDSVQASINYVL 431
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ + G+D + + + + + A ++ L D L +
Sbjct: 432 SGNLEKLTLTGTDAIDGTGNELNNTITGNSGANILD---GGAGNDTLDGGAGDDMLLGGI 488
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYL-GSYDDLR---NVFGSDRGAAARHYITHGVKEGRNP 521
G + + + Y S +D+ G+D A+ +Y+ G E
Sbjct: 489 GNELLDGGIGNDTMQGGIGNDTYSVDSENDVIVENAGEGTDSVQASINYVLSGNIEKLIL 548
Query: 522 DA-----------FKALEYIASHEDLINAFADAPDLVQAGKD 552
AL + L + AG D
Sbjct: 549 TGSDDIHGTGNELNNALTGNSGANMLDGGSGNDTLEGGAGAD 590
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 58/486 (11%), Positives = 112/486 (23%), Gaps = 47/486 (9%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ + + S D AD + +
Sbjct: 1152 DVMDGGAGNDFLHGDSGNDSMFGGSGNDQLHGSDGADALHGNADDDMLFGIAGDDALYGD 1211
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G G V G + + Y + ++ +
Sbjct: 1212 EGSDSLHGGEGNDLVDGGTGNDLLHGNQGADTMYGGEGNDSVEGGDDSDLQYGDGGDDYM 1271
Query: 192 QKIYGAPKGSLG---NNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+ G G + +Y + + T++ G D ++ GG + +
Sbjct: 1272 EGDGGDDTIHAGEGADIVYGGDGNDSIHGNQGADTLHGGEGSD----SVEGGDDSDLQYG 1327
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + + + ++G ND V G + +++ S GND G G D
Sbjct: 1328 DGGDDYMEGDGGDDALFGGDGNDGIIGGDDNDSVDGGAGDDMIEGSDGNDTVVGGDGDDV 1387
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + D + L D V L
Sbjct: 1388 IY----------------------GDELHDSPGGDDLLYGGDGNDILVGGFGNDSLNGGV 1425
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L + + G DI F L + G D + Y
Sbjct: 1426 GNDSLFGGN-EYNLGADDGIDTLAGGVGDDIYFVDS--LQDIVKENSGEGQDTVLSFIDY 1482
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
E A + D Q G D +
Sbjct: 1483 TLLDEVENLELLDGIRGTGNALDNVVTGNGRDNVLDGQSGNDTIEGGSG--------NDS 1534
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
++ GS D + + + Y + + + A +D+ +
Sbjct: 1535 VWGGSGSDSIDGGAGNDYLSGTDYYGYA-----DGGDADMITGGAGDDDIRGGAGNDVLS 1589
Query: 547 VQAGKD 552
G+D
Sbjct: 1590 GDDGRD 1595
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 65/227 (28%), Gaps = 9/227 (3%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
D G G ++ + + G S +D Y N
Sbjct: 1853 DGGSSLDGGIGNDSLYAGNGNDSLYGGDGDDYLEAGYGYYDSYSGTWITGNVTLDGGYGN 1912
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
D+ + + + D + + + G L + +
Sbjct: 1913 DTISGRDGNDLLVGGAGDDDLSDWAGANTLEGGDGNDTLTGGYGNDLIDGGTGNDSISGG 1972
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
F +G D ++ G + T S++ G N +I +S+VG +
Sbjct: 1973 DGFDMLDGGTGDDTMIAGYDYGSGAASARMATSGGSTLDGGAGNDSIFGGAGDDSLVGGT 2032
Query: 276 GNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYAPS 313
GND + + N G+D DG G+DT + +
Sbjct: 2033 GNDYLYDWNGANTIDGGEGDDTISYSSGDAFIDGGDGVDTLVLDSSA 2079
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 54/393 (13%), Positives = 98/393 (24%), Gaps = 29/393 (7%)
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
S D+ +G + + + G + I G
Sbjct: 1527 EGGSGNDSVWGGSGSDSIDGGAGNDYLSGTDYYGYADG--GDADMITGGAGDDDIRGGAG 1584
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+D+L G I G + + ++ +++ G G+D + G S +
Sbjct: 1585 NDVL----SGDDGRDSLYGENGADDIDGGDGDDSLYGGDGNDAMAGEEGSDWIYGESGED 1640
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ +GND DG G D+ Y + VY+A D + A
Sbjct: 1641 SLYGGNGNDALDGGDGDDSVSGGEG-DDYLHGGHGYSEWVYNAVTGGSDLVYH------A 1693
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
D L + + L D + EG D +
Sbjct: 1694 DGQNTLYGGSGSDTLYGSDGNDVLAGDADADTLDGSTGSDSMLGGEGDDYLYG------- 1746
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
G + T D L+ ++ L + G
Sbjct: 1747 --------GGTTYVSTYDSATDIWDTMIIYDGNDTLDGGTGNDYLSAGDGNDLLQGGEGD 1798
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
D + G + G + Y + G + D +L
Sbjct: 1799 DQLYGGQGSNMLDGGDGADYLRGEGISDTLLGGDGDDDLSGSYAYYDSVSGFHYDGGSSL 1858
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
+ ++ L + G D + GY
Sbjct: 1859 DGGIGNDSLYAGNGNDSLYGGDGDD-YLEAGYG 1890
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 33/255 (12%), Positives = 57/255 (22%), Gaps = 19/255 (7%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF------- 399
+ L + L G DV + EG D +
Sbjct: 3306 TSSDDSIIGTPGNDALYGHGGNDTLDGQGGDDVLDGGTGNDTLYGGEGNDTLYGGEEADD 3365
Query: 400 -------DSYLYLGSYDDLRNVFGSDRGAAARH-----YITHGVKEGRNPDAFKALEYIA 447
LY G+ +D+ V D G ++
Sbjct: 3366 STGGGYRTDSLYGGAGNDVLEVSDVDGYLDGGEGDDDLSGDSGNDTMYGGAGNDTIDGSD 3425
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ L + + +D + G D
Sbjct: 3426 GNNYLDGGEDNDVLVGDDDRDTLIGGEGNDTLLSDKGDDSLSGGDGDDYLHGEWGSSELD 3485
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
+ G D L+ A ++ LI D + G D G E +IT+
Sbjct: 3486 YVGTGEMIVPGGPEDGSDTLDGGAGNDTLIGGAGDDTLIGGDGNDTAVFSGNYEDYTITY 3545
Query: 568 NPDLYLTSYDDLWNV 582
+ + + D
Sbjct: 3546 DVATFAYTVVDSIAD 3560
>gi|85715919|ref|ZP_01046897.1| Putative glycosyl transferase [Nitrobacter sp. Nb-311A]
gi|85697326|gb|EAQ35206.1| Putative glycosyl transferase [Nitrobacter sp. Nb-311A]
Length = 176
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 9/157 (5%)
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD-RGAAARH 509
DL + F D V++ + + FD YL +Y D+ S + H
Sbjct: 13 DLPDQFKTDADEVRLPRKTLAGLLDLYISSWDFDEDWYLTTYPDIAAAVSSTRFPSGWAH 72
Query: 510 YITHGVKEGR--NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT- 566
+ + G EGR +P + Y+ ++ D+ A + + +HF NFGY EGR +
Sbjct: 73 FRSVGYLEGRLGSPTIVDSEWYLETYPDVAQA--MLEGKIASAAEHFENFGYAEGRLPSK 130
Query: 567 --FNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMK 600
+ Y Y + + A + ++ G +
Sbjct: 131 PGVDARWYARRYMHVRKQDQDEEEKHAHEDFVRRGYR 167
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS---ITFNPDLYLTSYDDL 579
F Y+ ++ D+ A + +G HF + GY EGR + + YL +Y D+
Sbjct: 44 DFDEDWYLTTYPDIAAAVSS--TRFPSGWAHFRSVGYLEGRLGSPTIVDSEWYLETYPDV 101
Query: 580 WNVFGSDRSA-AAQHYITHGMKEGR 603
+ A AA+H+ G EGR
Sbjct: 102 AQAMLEGKIASAAEHFENFGYAEGR 126
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 398 TFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGR--NPDAFKALEYIASHEDLIN 454
FD YL +Y D+ S + H+ + G EGR +P + Y+ ++ D+
Sbjct: 44 DFDEDWYLTTYPDIAAAVSSTRFPSGWAHFRSVGYLEGRLGSPTIVDSEWYLETYPDVAQ 103
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRF---VTFDSYLYLGSY 492
A + + +HF NFG EGR D+ Y Y
Sbjct: 104 AMLEG--KIASAAEHFENFGYAEGRLPSKPGVDARWYARRY 142
Score = 44.8 bits (104), Expect = 0.043, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 27/85 (31%), Gaps = 4/85 (4%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR---DITFDSYLYLGSYDDLRNV 414
T + V HF G EGR DS YL +Y D+
Sbjct: 45 FDEDWYLTTYPDIAAAVSSTRFPSGWAHFRSVGYLEGRLGSPTIVDSEWYLETYPDVAQA 104
Query: 415 -FGSDRGAAARHYITHGVKEGRNPD 438
+AA H+ G EGR P
Sbjct: 105 MLEGKIASAAEHFENFGYAEGRLPS 129
Score = 41.3 bits (95), Expect = 0.55, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 15/85 (17%)
Query: 532 SHEDLINAFADAPD-------LVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFG 584
+ DL + F D + D + + S F+ D YLT+Y D+
Sbjct: 10 AFGDLPDQFKTDADEVRLPRKTLAGLLDLYIS-------SWDFDEDWYLTTYPDIAAAVS 62
Query: 585 SDRS-AAAQHYITHGMKEGRALGIS 608
S R + H+ + G EGR +
Sbjct: 63 STRFPSGWAHFRSVGYLEGRLGSPT 87
>gi|113476972|ref|YP_723033.1| hemolysin-type calcium-binding protein [Trichodesmium erythraeum
IMS101]
gi|110168020|gb|ABG52560.1| Hemolysin-type calcium-binding region [Trichodesmium erythraeum
IMS101]
Length = 9867
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 66/456 (14%), Positives = 122/456 (26%), Gaps = 40/456 (8%)
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI-- 209
+ + + +S+ ++++ A + D +A + ++
Sbjct: 9358 PFIDMNSQFEQLSFGTEDSEDIESNDLIQAAQVTFDALAGDD--QINASDNSDTVFGGKG 9415
Query: 210 ---------EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGG 255
I GDD + D T+ G V N L + + G
Sbjct: 9416 EDTVMGNRGNDFLGGDEQNDYIKSGKGDDTVRGGKDDDTISGDVGNDTLLGDQGKDLLIG 9475
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
T + + G G+D++ GN N+ ND G G DT F
Sbjct: 9476 GTGGDNDKDDTGKDLLNGGRGDDLLNGNRDNDTVMGGKDNDEVYGGKGDDTIF--GEKGN 9533
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
++ + + + L + + I+ + +
Sbjct: 9534 DTLFGDDGDDKIVTDPNSSSSEEGIGKDLAYGGRGKDIIAGHRGDDIVNAGKGNDFIYGG 9593
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF--DSYLYLGSYDDLRNVFGSD---RGAAARHYITH 429
D + G D F ++ ++ D + G+D A I+
Sbjct: 9594 KDNDSIFGDQGNDTLLGENGDDTIFGGNNNIFGEDEDYINGGVGNDYLTGNDADDVIISG 9653
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV-------T 482
+ L Y +S DL+ + D +G E
Sbjct: 9654 EGDDTARGGKDDDLMYGSSGNDLMFGDQGNDIICGCVGDDTI-YGDSEKPLPVATLGTQG 9712
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
L+ G+ +DL FG+ Y G L ++ L+ D
Sbjct: 9713 HKDKLFGGTGNDLM--FGNQDQDTL--YAEEGDDTLLGGKDNDVLCGDQGNDSLLGEAGD 9768
Query: 543 APDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDD 578
G D F G + N D + D
Sbjct: 9769 DLLYGGEGDDTF--SGGIGSDTFLVNFDQGIDVITD 9802
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 75/235 (31%), Gaps = 17/235 (7%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D G T+L N I G + + Y GV ND
Sbjct: 9582 NAGKGNDFIYGGKDNDSIFGDQGNDTLLGENGDDTIFG--GNNNIFGEDEDYINGGVGND 9639
Query: 153 YENDSFLTSVMSYFMPQDS-----MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
Y + V+ D+ D +G ++ I G + IY
Sbjct: 9640 YLTGNDADDVIISGEGDDTARGGKDDDLMYGSSGNDLMFGDQGNDIICGC---VGDDTIY 9696
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + T+ G D L GG N + + ++ E + T+
Sbjct: 9697 G---DSEKPLPVATLGTQGHKDKL----FGGTGNDLMFGNQDQDTLYAEEGDDTLLGGKD 9749
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G GND ++G + +++ + G+D F G G DTF + I F
Sbjct: 9750 NDVLCGDQGNDSLLGEAGDDLLYGGEGDDTFSGGIGSDTFLVNFDQGIDVITDFN 9804
>gi|84499402|ref|ZP_00997690.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
gi|84392546|gb|EAQ04757.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
Length = 2266
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/330 (12%), Positives = 84/330 (25%), Gaps = 19/330 (5%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM------ 135
+ + D G G + + + ++G
Sbjct: 1884 VFIGTSGANALSGIGGNDLFYGLGGDDTLNGGSGDDALDGGDGADVLIGSVGTDAVRYVS 1943
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + D+F + S + ++ +
Sbjct: 1944 SAAVQVNLAANTGAGGQAQGDTFYGIENLVGSQFGDTLVGSAEANVIQGLDGDDLMRGWH 2003
Query: 196 GAPK--GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
GA G G + + SGG D + + + +
Sbjct: 2004 GADTLIGHAGIDTASYQDSAVGVNIGIFRAGSGGTAEGDRLIFVEG----IIGSGHDDEL 2059
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + ++++ GN + G ++ G D DG +G DT Y S
Sbjct: 2060 VGGGFAPILEGAGGNDTLIDFGGNATIRGGFGDDTINAGGGADSIDGGAGTDTLRYANTS 2119
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + D + +VE + ++ + LE + +
Sbjct: 2120 SVTIDLGAGTG----SGFAAEGDTIVNVENVVGSNAADTLTGDGADNRLEGLYGEDTIKG 2175
Query: 374 VIGQDVFESMKHFYEF---GLSEGRDITFD 400
+G DV + F GRD+ D
Sbjct: 2176 GVGNDVLVGGGNADTFVFDTAGWGRDLVLD 2205
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 55/402 (13%), Positives = 94/402 (23%), Gaps = 43/402 (10%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ GDD + I L GG + IE+
Sbjct: 1821 DWLNGGSHADVLDGGSGDDFVTYAGAASGARRISL--GGTPGEGGESHGDVLRN---IEN 1875
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------------FYYAPSY 314
+GS DV IG S N GND+F G G DT
Sbjct: 1876 AIGSRFADVFIGTSGANALSGIGGNDLFYGLGGDDTLNGGSGDDALDGGDGADVLIGSVG 1935
Query: 315 LYKIYRFENAIIVYD-------ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ +A + + + + D +E L + V + ++++
Sbjct: 1936 TDAVRYVSSAAVQVNLAANTGAGGQAQGDTFYGIENLVGSQFGDTLVGSAEANVIQGLDG 1995
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ + G D + GS G
Sbjct: 1996 DDLMRGWHGADTLIGHAGIDTASYQDSAVGVNIGIFRAGSGGT---AEGDRLIFVEGIIG 2052
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDS 485
+ E LE ++ LI+ +A G D + G + D+
Sbjct: 2053 SGHDDELVGGGFAPILEGAGGNDTLIDFGGNATIRGGFGDDTINAGGGADSIDGGAGTDT 2112
Query: 486 YLY----------LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
Y G ++ A LE + +
Sbjct: 2113 LRYANTSSVTIDLGAGTGSGFAAEGDTIVNVENVVGSNAADTLTGDGADNRLEGLYGEDT 2172
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD 577
+ + + D F GR + + D
Sbjct: 2173 IKGGVGNDVLVGGGNADTFVFDTAGWGRDLVLDWQDNFDKID 2214
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 54/170 (31%), Gaps = 1/170 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++VG GND + G + +V +G D G +G+DT Y + +
Sbjct: 88 TLVGRDGNDSLYGGAGRDVLIGGAGADALTGGAGVDTADYSGAATSVFVDLDFGGTGRGF 147
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
E + D L VE L +D + + L + L G D +
Sbjct: 148 RGEAQGDVLDGVENLVGSDYEDILIGDNAANALAGGEGDDRLQSQGGTDTLSGGEGDDLL 207
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
++ L D ++ D + R ++ +G
Sbjct: 208 NRGT-LATLSNAKANLYDGGDGFDIVAVDVFSPFRQTGSYTADDGGKFTF 256
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/255 (13%), Positives = 56/255 (21%), Gaps = 23/255 (9%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ + + + AD G T N
Sbjct: 1980 TLVGSAEANVIQGLDGDDLMRGWHGADTLIGHAGIDTASYQ------------DSAVGVN 2027
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G G E D + D + + G
Sbjct: 2028 IGIFRAGSGGTAEGDRLIFVEGIIGSGHDDELVGGGFAPILEGAGGNDTLIDFGGNATIR 2087
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G + +I G D L IDL + S +
Sbjct: 2088 GG----FGDDTINAGGGADSIDGGAGTDTLRYANTSS--VTIDLGAGTGSGFAAEGDTI- 2140
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+E+VVGS+ D + G+ A+N G D G G D + +
Sbjct: 2141 ----VNVENVVGSNAADTLTGDGADNRLEGLYGEDTIKGGVGNDVLVGGGNADTFVFDTA 2196
Query: 322 ENAIIVYDANEHKQD 336
+ + D
Sbjct: 2197 GWGRDLVLDWQDNFD 2211
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/325 (13%), Positives = 81/325 (24%), Gaps = 24/325 (7%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++ G+ + T+ ++++G G D ++G + + S DV DG SG D
Sbjct: 1782 GGDDNLFGFAGDDTLEGGKGDDTILGDLGLDHLLGGAGGDWLNGGSHADVLDGGSGDDFV 1841
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y + + + E D L ++E + + + L
Sbjct: 1842 TYAGAASGARRISLGG--TPGEGGESHGDVLRNIENAIGSRFADVFIGTSGANALSGIGG 1899
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ + G D +G D+ S + A
Sbjct: 1900 NDLFYGLGGDDTLNGGSGDDALDGGDGADVLIGSVGTDAVRYVSSAAVQVNLAANTGAGG 1959
Query: 428 T------HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF- 480
+G++ L A + D G D +
Sbjct: 1960 QAQGDTFYGIENLVGSQFGDTLVGSAEANVIQGLDGDDLMRGWHGADTLIGHAGIDTASY 2019
Query: 481 ---------VTFDSYLYLGSYDD----LRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
F + + D + + GS + EG L
Sbjct: 2020 QDSAVGVNIGIFRAGSGGTAEGDRLIFVEGIIGSGHDDELVGGGFAPILEG--AGGNDTL 2077
Query: 528 EYIASHEDLINAFADAPDLVQAGKD 552
+ + F D G D
Sbjct: 2078 IDFGGNATIRGGFGDDTINAGGGAD 2102
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 6/147 (4%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG---VKNYIDLNTE 248
Q +YG+ ++ N K + Q++ + GD++ +D +
Sbjct: 315 QAVYGSRNSAVDLNWDKRTTNYNINISDQSLSNLRGDNINYTRGDYYSLFGSGTVDSTSG 374
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ S GG + + IE ++ S GND + GNSA N FF + G+D+ +G G D
Sbjct: 375 APSVRGGEFGSELVQN---IEGMIASRGNDRITGNSAANAFFGNGGSDLLEGGGGDDRLG 431
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQ 335
+ L ++ F + V +
Sbjct: 432 FGEGQALSDVFSFPGSSGVQAPGSDSR 458
Score = 44.8 bits (104), Expect = 0.052, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 50/167 (29%), Gaps = 35/167 (20%)
Query: 217 PFIQTIYDSGGDDLLD---------LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT- 266
++ GG D LD + +DLN S ++ I
Sbjct: 500 DIGSFLWGQGGIDTLDMRYDRGVSFYPDLSTNYAVVDLNIASSAAPTNLYTGEQIQYGRA 559
Query: 267 ----------------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+E+++GS +DV+IG+ +N G D G +G DT Y
Sbjct: 560 GWYDPAGTRQSFATTYGVENIIGSRRDDVLIGDRNDNRIEGLDGADEMRGGAGFDTAAYS 619
Query: 311 APSYLYKIYRFENA---------IIVYDANEHKQDFLSDVERLRFAD 348
+ IV + D + ER ++
Sbjct: 620 LADEGVTLNLRSEGSGFVLDNAREIVTGTGDATGDLAEEFERFEGSN 666
Score = 38.2 bits (87), Expect = 4.5, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 45/212 (21%), Gaps = 26/212 (12%)
Query: 288 VFFESSGNDVF-------------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+G+DV DG +G D L + +Y E
Sbjct: 2 TVHAGAGDDVLATSYAPVAAGSLFDGGAGFDRLEVDG--DLDLMTGIGGQGEIYRNFEAV 59
Query: 335 QDFLSDVERLRF-----------ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
E F V L A + LI G D
Sbjct: 60 AAHADRDEDQTFRGDGGNNLLGGGLGDDTLVGRDGNDSLYGGAGRDVLIGGAGADALTGG 119
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
S F + G+ R D + + ++ D
Sbjct: 120 AGVDTADYSGAATSVFVDLDFGGTGRGFRGEAQGDVLDGVENLVGSDYEDILIGDNAANA 179
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+D + + L D N G
Sbjct: 180 LAGGEGDDRLQSQGGTDTLSGGEGDDLLNRGT 211
>gi|237801157|ref|ZP_04589618.1| calcium binding hemolysin protein [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024014|gb|EGI04071.1| calcium binding hemolysin protein [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 2983
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 72/476 (15%), Positives = 135/476 (28%), Gaps = 50/476 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ N + + + D +DV G G + G
Sbjct: 2446 SGGAGADTLNGNDGNDVLQGGADDDVLYGGDGSDVLDGGAGNDRLDGGAGDDIYIFGKGA 2505
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM-----VSDIV 189
Y G + + S +S + G + + D
Sbjct: 2506 GQDSIYYANETRAGKMDTVKLTDLNASDVSVTRDGMDLFIRVNGTTDSLRVIYHFLGDAT 2565
Query: 190 A---VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
A + +I A L K +V + S T+ + +D++D L N
Sbjct: 2566 AGYQIDRIQFADGSFLDQAAIKFQV-LQGSDGDDTLSGTSSNDVIDAGLGDDTVN----G 2620
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ G + + T+ + + G +GND + GN N+V +GNDV +G +G DT
Sbjct: 2621 GGGDDTLKGNDGSDTLNGGDGNDLLQGGAGNDALNGNDGNDVLDAGAGNDVLNGGNGNDT 2680
Query: 307 FFYYAPSYLYKIYRF-----------------------------------ENAIIVYDAN 331
+ + S + ++ + A+
Sbjct: 2681 YLFGKGSGQDTVNNGGEVRIGKTDTLKLTDLNTADVQVTRENNDLLIQVIGSSDSLRVAS 2740
Query: 332 EHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D + ++R++FAD + + ++++ T S + L DV +
Sbjct: 2741 HFAGDATAGYEIDRIQFADGSEWNQTTIKSNVIQSTDSDDTLRGFATDDVISAGLGDDAI 2800
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
++G D Y D+ N Y G AL
Sbjct: 2801 YGADGNDTLSGGDGIDALYGDVGNDHLLGDAGNDTLYGGAGDDLLDGGAGNDALTGSEGS 2860
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ D V SN + V+ + + S +DL
Sbjct: 2861 DTYAFGVGGGKDSVNNYDASTSNDTVQFDASVSLEELWFRRSGNDLEVSIVDTPDK 2916
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 66/514 (12%), Positives = 120/514 (23%), Gaps = 61/514 (11%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+D F + + D G G T+ + G
Sbjct: 2394 ADGSFWDQTAIKTQIMQGTAADETLSGTSADDTIDAGAGDDTVNGMAGSDTLSGGAGADT 2453
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+G + G +D S + + +D G + IY
Sbjct: 2454 LNGNDGNDVLQGGADDDVLYGGDGSDVLDGGAGNDRLDGGAGDDI-YIFGKGAGQDSIYY 2512
Query: 197 APKGSLG--NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
A + G + + ++ D + G DL + + ++ G
Sbjct: 2513 ANETRAGKMDTVKLTDLNASDVSVTR-----DGMDLFIRVNGTTDSLRVIYHFLGDATAG 2567
Query: 255 GYEKNMTIAQHTVIESVV-------GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ A + ++ GS G+D + G S+N+V G+D +G G DT
Sbjct: 2568 YQIDRIQFADGSFLDQAAIKFQVLQGSDGDDTLSGTSSNDVIDAGLGDDTVNGGGGDDTL 2627
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
D L+ D L
Sbjct: 2628 ----------------------KGNDGSDTLNG------GDGNDLLQGGAGNDALNGNDG 2659
Query: 368 YEDLIQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ L G DV FG G+D + D + +
Sbjct: 2660 NDVLDAGAGNDVLNGGNGNDTYLFGKGSGQDTVNNGGEVRIGKTDTLKLTDLNTADVQVT 2719
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG--------KDHFSNFGCEE 477
+ + + D + G K + +
Sbjct: 2720 RENNDLLIQVIGSSDSLRVASHFAGDATAGYEIDRIQFADGSEWNQTTIKSNVIQSTDSD 2779
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH-------YITHGVKEGRNPDAFKALEYI 530
F + + + ++G+D Y G L
Sbjct: 2780 DTLRGFATDDVISAGLGDDAIYGADGNDTLSGGDGIDALYGDVGNDHLLGDAGNDTLYGG 2839
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
A + L + G D + FG G+
Sbjct: 2840 AGDDLLDGGAGNDALTGSEGSDTY-AFGVGGGKD 2872
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/303 (15%), Positives = 90/303 (29%), Gaps = 20/303 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + + D + +G G G + A L +
Sbjct: 2083 GGAGNDTLNGGTGDDILDGGAGNDLLNGGAGDDTYLFGKGSGQDSIYYANESRLGKLDTV 2142
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV---- 191
N D + S + M DA+ GY + +
Sbjct: 2143 KLLGLNPSDVTISRDGYDLILKVNGTTDSLRIYYHFMGDATSGYQIDRIQFADGSFWDQT 2202
Query: 192 ---QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
++ + + Y+ + +I SGG+D L
Sbjct: 2203 FIKTEVLRSTDANQSLTGYETDDVINAGVGDDSISGSGGNDTLS-------------GEA 2249
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G N T+ + +++ G G+D++ G N+ + +GNDV DG SG D
Sbjct: 2250 GDDTVSGGTGNDTLIGGSGADTLNGDDGDDLLQGGVGNDNLYGGNGNDVLDGGSGNDLLN 2309
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
Y + VY ANE + D L V+ + + ++ +
Sbjct: 2310 GGNGDDTYLFGKGSGQDRVYYANETRADKLDTVKLIDLNAGDVSLSRDGYDLVIRVNGTT 2369
Query: 369 EDL 371
+ L
Sbjct: 2370 DSL 2372
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 67/496 (13%), Positives = 123/496 (24%), Gaps = 32/496 (6%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
T + AD G + + +G +GG
Sbjct: 1866 AAGDDTVSGGGGNDTLLGGAGADRLNGDDGNDLLQGGTGNDILNGGIG---NDILDGGAG 1922
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
+D +D++L S +A G T +SD+ A +
Sbjct: 1923 NDRLDGGAGDDAYLFGKGSGQDTIYYAYEARAGKVDTVKLSDLKASDI---TISRDAADL 1979
Query: 206 IYKIEVQQKDSPFIQTIYDSGGD----DLLDLTLIGGVKNYIDL-----NTESWSSIGGY 256
I +I + D + I +++ S+ GY
Sbjct: 1980 IIRINDTTDSMRVLNHFAGDAATGYQIDRIQFADGSFWDQSIIKLQVLKGSDADQSLTGY 2039
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ I +++ G +GND + G S + G+D +G +G DT +
Sbjct: 2040 AGDDIIDAGAGDDAMSGGAGNDTLSGGSGLDTISGDEGDDNLNGGAGNDTL--NGGTGDD 2097
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ ++ F L+ +
Sbjct: 2098 ILDGGAGNDLLNGGAGDDT--------YLFGKGSGQDSIYYANESRLGKLDTVKLLGLNP 2149
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI---THGVKE 433
DV S + G T +Y D + + DR A T E
Sbjct: 2150 SDVTISRDGYDLILKVNG--TTDSLRIYYHFMGDATSGYQIDRIQFADGSFWDQTFIKTE 2207
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+D+INA + G + + + L
Sbjct: 2208 VLRSTDANQSLTGYETDDVINAGVGDDSISGSGGNDTLSGEAGDDTVSGGTGNDTLIGGS 2267
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ G D + G + L+ + ++ L D L G
Sbjct: 2268 GADTLNGDDGDDLLQ--GGVGNDNLYGGNGNDVLDGGSGNDLLNGGNGDDTYLFGKGSGQ 2325
Query: 554 FSNFGYEEGRSITFNP 569
+ E R+ +
Sbjct: 2326 DRVYYANETRADKLDT 2341
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 72/485 (14%), Positives = 123/485 (25%), Gaps = 76/485 (15%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG- 133
S S T + I AD G + + G
Sbjct: 2237 SGSGGNDTLSGEAGDDTVSGGTGNDTLIGGSGADTLNGDDGDDLLQGGVGNDNLYGGNGN 2296
Query: 134 -LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
++ GS N D+ Y Y+ + D+ +
Sbjct: 2297 DVLDGGSGNDLLNGGNGDDTYLFGKGSGQDRVYYANETRADKLDTVKLIDLNAGDVSLSR 2356
Query: 193 KIYGAPKGSLGNN-----IYKIEVQQKDSPFIQTIYDSGGD--------------DLLDL 233
Y G +Y I I + G D
Sbjct: 2357 DGYDLVIRVNGTTDSLRVVYHFMGDATAGYQIDHIQFADGSFWDQTAIKTQIMQGTAADE 2416
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
TL G + ++ G + T++ +++ G+ GNDV+ G + ++V +
Sbjct: 2417 TLSGTSADDTIDAGAGDDTVNGMAGSDTLSGGAGADTLNGNDGNDVLQGGADDDVLYGGD 2476
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE--------------------- 332
G+DV DG +G D A +Y + +Y ANE
Sbjct: 2477 GSDVLDGGAGNDRLDGGAGDDIYIFGKGAGQDSIYYANETRAGKMDTVKLTDLNASDVSV 2536
Query: 333 --HKQDFLSD-----------------------VERLRFADQCIDSVNVKQRSILEYTAS 367
D ++R++FAD + +L+ +
Sbjct: 2537 TRDGMDLFIRVNGTTDSLRVIYHFLGDATAGYQIDRIQFADGSFLDQAAIKFQVLQGSDG 2596
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ L DV ++ G D + D L G+D
Sbjct: 2597 DDTLSGTSSNDVIDAGLGDDTVNGGGGDDTLKGNDG----SDTLNGGDGNDLLQ-----G 2647
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
G D L+ A ++ L + L G + E R D+
Sbjct: 2648 GAGNDALNGNDGNDVLDAGAGNDVLNGGNGNDTYLFGKGSGQDTVNNGGEVRIGKTDTLK 2707
Query: 488 YLGSY 492
Sbjct: 2708 LTDLN 2712
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/374 (12%), Positives = 93/374 (24%), Gaps = 69/374 (18%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G V + I +S + G N T++ ++++G G D++ G N++ +GND
Sbjct: 1353 GTVGDDIIFGYDSADVLKGASGNDTLSGRAGNDALLGGEGKDMLNGEDGNDILDGGAGND 1412
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAII------------------------------ 326
+G G DT+ + + + +
Sbjct: 1413 TLNGGYGSDTYVFRRGAGQDTVNNYAYNDTTPNKLDVVKLEGLNPADVLLRREVNDLIIQ 1472
Query: 327 ---------VYDANEHKQDFLSDVERLRFADQCI-------------------DSVNVKQ 358
V +++L+F D I + +
Sbjct: 1473 IKSTGETLKVSSHFSTSAILGYTIDQLQFDDGTIWNTTDISSNLAGQTSVDPLNLAGTGE 1532
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+L A + L G DV + G DI G+ D + +
Sbjct: 1533 NDVLAGGAGNDTLSGAAGDDVLDGRTGNDRLDGGAGDDIYL---FGKGAGQDTISSYEGR 1589
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
G +T + I + + + G +
Sbjct: 1590 VGKLDTVRLTSLNASDISLVRDANDLVINVN------GTADSLRISNHFIGEATSGYQID 1643
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
R D + + G+ Y + + A ++ L
Sbjct: 1644 RIQFADGTFWDQGTVKSEVLRGTAADQTLAGYQAD--DQIDAGAGDDIVSGGAGNDTLKG 1701
Query: 539 AFADAPDLVQAGKD 552
+ G D
Sbjct: 1702 GIGSDTLNGEEGND 1715
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/260 (16%), Positives = 73/260 (28%), Gaps = 63/260 (24%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
Y + + T+ GG+D L L + G + N +
Sbjct: 1855 TGYSTDDIIDVAAGDDTVSGGGGNDTL-------------LGGAGADRLNGDDGNDLLQG 1901
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-FDG-SSGLDTFFY------------- 309
T + + G GND++ G + N+ +G+D G SG DT +Y
Sbjct: 1902 GTGNDILNGGIGNDILDGGAGNDRLDGGAGDDAYLFGKGSGQDTIYYAYEARAGKVDTVK 1961
Query: 310 -------------YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI----- 351
A + +I +++ V + ++R++FAD
Sbjct: 1962 LSDLKASDITISRDAADLIIRINDTTDSMRVLNHFAGDAATGYQIDRIQFADGSFWDQSI 2021
Query: 352 -------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
I++ A + + G D EG
Sbjct: 2022 IKLQVLKGSDADQSLTGYAGDDIIDAGAGDDAMSGGAGNDTLSGGSGLDTISGDEGD--- 2078
Query: 399 FDSYLYLGSYDDLRNVFGSD 418
D+ D L G D
Sbjct: 2079 -DNLNGGAGNDTLNGGTGDD 2097
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 84/301 (27%), Gaps = 72/301 (23%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G+D L + G + T+
Sbjct: 421 GDDNITGYETADMLKGLRGNDTLS-------------GRAGDDVLDGGDGRDTLNGEDGN 467
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE------ 322
++++G +GND++ G + ++V SGND G G DT+ + S I +
Sbjct: 468 DTLLGGAGNDMLSGGNGDDVMDGGSGNDTLSGGGGSDTYIFRKGSGQDTILNYAYSDATQ 527
Query: 323 ---------------------NAIIVYDANEHKQDFLSD---------VERLRFAD---- 348
+++ ++ + +++++F+D
Sbjct: 528 NKLDVVKLEGLTASQVSIRREGDDLIFQISDTGETLRVSSHFSSDAYAIDQVQFSDGIFW 587
Query: 349 --------------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
L A ++ L G D+ + + +G
Sbjct: 588 DKTQITAALLVGTAGDDSITGYATEDKLSGLAGHDTLSGRAGNDILDGGEGNDTLYGEDG 647
Query: 395 RDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
D D+ D L G D A + T+ ++G D Y +
Sbjct: 648 SDTLLGGKGNDALSGGDGNDLLDGGVGMDSLAGGKGSDTYTFRKGYGQDTINNSAYNDTT 707
Query: 450 E 450
E
Sbjct: 708 E 708
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/298 (15%), Positives = 83/298 (27%), Gaps = 62/298 (20%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D ++ GGV N ++ G + T+ + + G + D++ G + N+
Sbjct: 63 DDSISGGVGNDTIYGRAGNDTLSGEAGSDTLYGEDGNDLLNGGADADLLYGGNGNDTLDG 122
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---------------------------- 323
GND DG G DT+ S +I + +
Sbjct: 123 GGGNDTLDGGMGSDTYVLRKGSGQDQINNYTSDDKTAQKIDKVKLDGLNPADITVHREYN 182
Query: 324 ---------AIIVYDANEHKQ--DFLSDVERLRFADQCI------------------DSV 354
+ + Q D + V++L+FAD + +
Sbjct: 183 DLVIQIKSTGDSIRVNSHFNQDGDSVYAVDQLQFADSTVWDGAKLKTEVLKTTGDNDTII 242
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-----TFDSYLYLGSYD 409
+ L A + L G D + EG D D+ D
Sbjct: 243 GYQTADQLFGLAGNDTLSGRGGDDFLDGGAGKDTLNGEEGSDTLLGGADNDTLSGGEGND 302
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
L G+D A T+ + G D ++ D+ + +
Sbjct: 303 LLDGGTGNDSLAGGLGSDTYVFRRGSGQDTIYNSVSNEANTDIQDVIVLEGLKPEDVV 360
Score = 57.1 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/266 (12%), Positives = 67/266 (25%), Gaps = 26/266 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS-----------HN 123
D + + + D G+G T + +
Sbjct: 94 YGEDGNDLLNGGADADLLYGGNGNDTLDGGGGNDTLDGGMGSDTYVLRKGSGQDQINNYT 153
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
+ + + + N + + ++ S + D Y
Sbjct: 154 SDDKTAQKIDKVKLDGLNPADITVHREYNDLVIQIKSTGDSIRVNSHFNQDGDSVYAVDQ 213
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+ V GA + ++ G+D L
Sbjct: 214 LQFADSTVWD--GAKLKTEVLKTTGDNDTIIGYQTADQLFGLAGNDTLS----------- 260
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ G T+ ++++G + ND + G N++ +GND G G
Sbjct: 261 --GRGGDDFLDGGAGKDTLNGEEGSDTLLGGADNDTLSGGEGNDLLDGGTGNDSLAGGLG 318
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYD 329
DT+ + S IY + D
Sbjct: 319 SDTYVFRRGSGQDTIYNSVSNEANTD 344
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 59/431 (13%), Positives = 112/431 (25%), Gaps = 69/431 (16%)
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTI--LSHNALHEIGHALGLMHPGSYNGGYP 145
T + + D G G T+ + ++ GH G +
Sbjct: 849 ANDTLKGGADNDSLSGGYGDDFLDGGSGNDTLYGGYGSDVYVFGHGSGQDTINNSAYNDT 908
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG--APKGSLG 203
+ + + +S D ++ T V+ + IYG +
Sbjct: 909 TVNKLDVVRLEGLNQADVSLRRDSDDLVIQIRDSGDTLRVASYFSSSAIYGYAVDQLLFA 968
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGD--DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ Q + + T D + D G + I + G + T
Sbjct: 969 DGSTLNVDQLRAAILKGTQEDDSLIAFESADFLNGLGGNDTIS-GRGGDDVLDGGDGKDT 1027
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
++ +++ G +GND + G N+ GND G G D + + + I
Sbjct: 1028 LSGEDGNDTLFGGAGNDTLNGGYGNDSLDGGLGNDSLSGGVGSDIYVFRKGAGQDTINNS 1087
Query: 322 ENAII---------------------------------------VYDANEHKQDFLSDVE 342
V ++
Sbjct: 1088 AYNDTTVGKLDVIRFEGLNAEDISIRRESDDLILQIKETGDTLRVTSHFSASAISGYAID 1147
Query: 343 RLRFADQCIDS------------------VNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+L+FAD + V +L+ A +++ G D+ +
Sbjct: 1148 QLQFADGTLMDNSQIKLALLGGTEDDDTLVGYDTDDVLKGLAGNDNISGRAGADILDGGA 1207
Query: 385 HFYEFGLSEGRDI-----TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
EG D+ D+ D L G+D A T+ ++G D
Sbjct: 1208 GKDSLYGDEGNDVLRGEADDDTLNGGIGDDLLDGGAGNDSLAGGSGSDTYVFRKGSGQDT 1267
Query: 440 FKALEYIASHE 450
Y +
Sbjct: 1268 INNSVYNDTTA 1278
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 35/304 (11%), Positives = 71/304 (23%), Gaps = 48/304 (15%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D ++ G ++ G N + +++ G G+D ++G N+
Sbjct: 603 DDSITGYATEDKLSGLAGHDTLSGRAGNDILDGGEGNDTLYGEDGSDTLLGGKGNDALSG 662
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV------------------------ 327
GND+ DG G+D+ S Y + +
Sbjct: 663 GDGNDLLDGGVGMDSLAGGKGSDTYTFRKGYGQDTINNSAYNDTTENKLDVIRLEGLNVS 722
Query: 328 ------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ +++L+FAD I + ++L
Sbjct: 723 DVVIKRDSDDLLIQIKESGETLRVTSHFSASTIYGYAIDQLQFADGTILENAQIRAALLL 782
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
T + + + DV G D D +
Sbjct: 783 GTDADDVMTGYSTDDVIAGDGGNDTLSGGSGSDRIEGGDGKDNLSGDDGDDLLLGGSGDD 842
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ +L + L + G D + +
Sbjct: 843 SLSGGDANDTLKGGADNDSLSGGYGDDFLDGGSGNDTLYGGYGSDVYVFGHGSGQDTINN 902
Query: 484 DSYL 487
+Y
Sbjct: 903 SAYN 906
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 64/511 (12%), Positives = 121/511 (23%), Gaps = 28/511 (5%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
SD F + + D G T+ + G
Sbjct: 582 SDGIFWDKTQITAALLVGTAGDDSITGYATEDKLSGLAGHDTLSGRAGNDILDGGEGNDT 641
Query: 137 PGSYNGGYPVYG---VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+G + G D D M + S Y
Sbjct: 642 LYGEDGSDTLLGGKGNDALSGGDGNDLLDGGVGMDSLAGGKGSDTYTFRKGYGQDTINNS 701
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
Y + + I + + + DDLL G + + + +
Sbjct: 702 AYNDTTENKLDVI-----RLEGLNVSDVVIKRDSDDLLIQIKESGETLRVTSHFSASTIY 756
Query: 254 GGYEKNMTIAQHTVIESV-------VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
G + A T++E+ +G+ +DV+ G S ++V GND G SG D
Sbjct: 757 GYAIDQLQFADGTILENAQIRAALLLGTDADDVMTGYSTDDVIAGDGGNDTLSGGSGSDR 816
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
++ ++ ++ ++ AD S L+ +
Sbjct: 817 IEGGDGKDNLSGDDGDDLLLGGSGDDSLSGGDANDTLKGGADNDSLSGGY-GDDFLDGGS 875
Query: 367 SYEDLIQVIGQDVF----ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L G DV+ S + + + L + D
Sbjct: 876 GNDTLYGGYGSDVYVFGHGSGQDTINNSAYNDTTVNKLDVVRLEGLNQADVSLRRDSDDL 935
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
G + Y + + L+ A V + E+ +
Sbjct: 936 VIQIRDSGDTLRVASYFSSSAIYGYAVDQLLFADGS-TLNVDQLRAAILKGTQEDDSLIA 994
Query: 483 FDSYLYLGSYD-------DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
F+S +L + G L ++
Sbjct: 995 FESADFLNGLGGNDTISGRGGDDVLDGGDGKDTLSGEDGNDTLFGGAGNDTLNGGYGNDS 1054
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
L + G D + +I
Sbjct: 1055 LDGGLGNDSLSGGVGSDIYVFRKGAGQDTIN 1085
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 52/426 (12%), Positives = 104/426 (24%), Gaps = 16/426 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY--GIGKGTILSHNALHEIGHALG 133
S +D + + G G+ TI + + L
Sbjct: 653 GGKGNDALSGGDGNDLLDGGVGMDSLAGGKGSDTYTFRKGYGQDTINNSAYNDTTENKLD 712
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
++ N V D+D S + + +GY + + +
Sbjct: 713 VIRLEGLNVSDVVIKRDSDDLLIQIKESGETLRVTSHFSASTIYGYAIDQLQFADGTILE 772
Query: 194 IYGAPKGSLGNNI-------YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
L Y + T+ G D ++ GG
Sbjct: 773 NAQIRAALLLGTDADDVMTGYSTDDVIAGDGGNDTLSGGSGSDRIE----GGDGKDNLSG 828
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + G + +++ +++ G + ND + G ++ SGND G G D
Sbjct: 829 DDGDDLLLGGSGDDSLSGGDANDTLKGGADNDSLSGGYGDDFLDGGSGNDTLYGGYGSDV 888
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEH---KQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + S I + + + +DV R +D + + ++
Sbjct: 889 YVFGHGSGQDTINNSAYNDTTVNKLDVVRLEGLNQADVSLRRDSDDLVIQIRDSGDTLRV 948
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ I D I + F + G
Sbjct: 949 ASYFSSSAIYGYAVDQLLFADGSTLNVDQLRAAILKGTQEDDSLIAFESADFLNGLGGND 1008
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
G D L ++ L + G D +
Sbjct: 1009 TISGRGGDDVLDGGDGKDTLSGEDGNDTLFGGAGNDTLNGGYGNDSLDGGLGNDSLSGGV 1068
Query: 484 DSYLYL 489
S +Y+
Sbjct: 1069 GSDIYV 1074
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 71/568 (12%), Positives = 134/568 (23%), Gaps = 39/568 (6%)
Query: 30 YKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYV 89
+ + +T LN + + R A V+++ S+ FI
Sbjct: 1584 SSYEGRVGKLDTVRLTSLNASDISLVRDANDL---VINVNGTADSLRISNHFIGEATSGY 1640
Query: 90 CT--PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG-----LMHPGSYNG 142
++ F + K++V R T+ + A +I G
Sbjct: 1641 QIDRIQFADGTFWDQGTVKSEVLRGTAADQTLAGYQADDQIDAGAGDDIVSGGAGNDTLK 1700
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
G N E + L + D + D A Y KG+
Sbjct: 1701 GGIGSDTLNGEEGNDVLRGGAGNDILSGGAGDDTLDGGDGNDRLDGGAGNDSYLFRKGAG 1760
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ IY + + D D+ + I+ +T++ + + + T
Sbjct: 1761 QDTIYNAYENRVGKLDRVKLTDLNASDVTLFQEGANLVIRINGSTDNLIVMNHFLNDAT- 1819
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
I+ + + G+ V + G+ G S D + +
Sbjct: 1820 -GGYQIDRIQFADGSFWNQSVIKARVLQGTDGDQSLTGYSTDDII--DVAAGDDTVSGGG 1876
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ RL D IL + L G D +
Sbjct: 1877 GNDTLLGGAGAD--------RLNGDDGNDLLQGGTGNDILNGGIGNDILDGGAGNDRLDG 1928
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ +G Y Y + V SD A+ +
Sbjct: 1929 GAGDDAYLFGKGSGQDTIYYAYEARAGKVDTVKLSDLKASDITISRDAADLIIRINDTTD 1988
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSN----------FGCEEGRFVTFDSYLYLGSY 492
+ +H A D +Q F + + + + +
Sbjct: 1989 SMRVLNHFAGDAATGYQIDRIQFADGSFWDQSIIKLQVLKGSDADQSLTGYAGDDIIDAG 2048
Query: 493 DDLRNVFGSDRGAAARH-------YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
+ G G L + L +
Sbjct: 2049 AGDDAMSGGAGNDTLSGGSGLDTISGDEGDDNLNGGAGNDTLNGGTGDDILDGGAGNDLL 2108
Query: 546 LVQAGKDHFSNFGYEEGRSITFNPDLYL 573
AG D + SI + + L
Sbjct: 2109 NGGAGDDTYLFGKGSGQDSIYYANESRL 2136
Score = 45.2 bits (105), Expect = 0.038, Method: Composition-based stats.
Identities = 58/507 (11%), Positives = 115/507 (22%), Gaps = 34/507 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D + + + D G T+ + +
Sbjct: 50 STDGNDVLTGYASDDSISGGVGNDTIYGRAGNDTLSGEAGSDTLYGEDGNDLLNGGADAD 109
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
NG + G + D + S +Y + + S D Y + + + K+
Sbjct: 110 LLYGGNGNDTLDGGGGNDTLDGGMGSD-TYVLRKGSGQDQINNYTSDDKTAQKIDKVKLD 168
Query: 196 GAPKGSLG------NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
G + + + +I+ G L D
Sbjct: 169 GLNPADITVHREYNDLVIQIKSTGDSIRVNSHFNQDGDSVYAVDQLQFADSTVWDGAKLK 228
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ N TI + + + G +GND + G ++ +G D +G G DT
Sbjct: 229 TEVLKTTGDNDTIIGYQTADQLFGLAGNDTLSGRGGDDFLDGGAGKDTLNGEEGSDTLL- 287
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + E ++ D L+ + + + S E
Sbjct: 288 -GGADNDTLSGGEGNDLL--DGGTGNDSLAGG----LGSDTYVFRRGSGQDTIYNSVSNE 340
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ V E +K E D+ +D + H+ ++
Sbjct: 341 ANTDIQDVIVLEGLKPEDVVMRRESDDLIIQIKD------------TNDSVRVSGHFSSY 388
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+ A +F + L D L
Sbjct: 389 -----VAYNYAIDQVKFADGSVWDTSFIKSALLTGNAGDDNITGYETADMLKGLRGNDTL 443
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
+ G D G L + + +
Sbjct: 444 SGRAGDDVLDGGDGRDTLN--GEDGNDTLLGGAGNDMLSGGNGDDVMDGGSGNDTLSGGG 501
Query: 550 GKDHFSNFGYEEGRSITFNPDLYLTSY 576
G D + +I T
Sbjct: 502 GSDTYIFRKGSGQDTILNYAYSDATQN 528
Score = 45.2 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 41/332 (12%), Positives = 80/332 (24%), Gaps = 40/332 (12%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N+V + +D G G DT + + + + +Y
Sbjct: 46 AAFKSTDGNDVLTGYASDDSISGGVGNDTIY--GRAGNDTLSGEAGSDTLYG-------- 95
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF----GLSE 393
D +L + L G D + + G +
Sbjct: 96 ---------EDGNDLLNGGADADLLYGGNGNDTLDGGGGNDTLDGGMGSDTYVLRKGSGQ 146
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARH---------YITHGVKEGRNPDAFKALE 444
+ + S D + G + H + G N + +
Sbjct: 147 DQINNYTSDDKTAQKIDKVKLDGLNPADITVHREYNDLVIQIKSTGDSIRVNSHFNQDGD 206
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLRNVFGSD 502
+ + + L A + D ++ + G + T D L D L G D
Sbjct: 207 SVYAVDQLQFADSTVWDGAKLKTEVLKTTGDNDTIIGYQTADQLFGLAGNDTLSGRGGDD 266
Query: 503 RGAAARHYITHGVKEG----RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
T +EG L ++ L + G D +
Sbjct: 267 FLDGGAGKDTLNGEEGSDTLLGGADNDTLSGGEGNDLLDGGTGNDSLAGGLGSDTYVFRR 326
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
+I + + D+ +V +
Sbjct: 327 GSGQDTIYNSVSN--EANTDIQDVIVLEGLKP 356
Score = 39.0 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 25/97 (25%), Gaps = 4/97 (4%)
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D K D + + + D + + + G D
Sbjct: 33 DGTTWKPDQVKTMAAFKSTDGNDVLTGYASDDSISGGVGNDTIYGRAGNDTLSGEAGSDT 92
Query: 389 FGLSEGRDITFD----SYLYLGSYDDLRNVFGSDRGA 421
+G D+ LY G+ +D + G +
Sbjct: 93 LYGEDGNDLLNGGADADLLYGGNGNDTLDGGGGNDTL 129
>gi|326931703|ref|XP_003211965.1| PREDICTED: matrix metalloproteinase-24-like [Meleagris gallopavo]
Length = 557
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 47/161 (29%), Gaps = 30/161 (18%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D + R A W +V LTFEE H
Sbjct: 95 LTGQKWRQKHITYSVHNYTPKVGELD-------TRRAIRQAFDVWQRVTPLTFEEVPYHE 147
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + D+
Sbjct: 148 IKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNSN 207
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 208 HDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 248
>gi|118100493|ref|XP_417326.2| PREDICTED: similar to MMP24 protein [Gallus gallus]
Length = 565
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 47/161 (29%), Gaps = 30/161 (18%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D + R A W +V LTFEE H
Sbjct: 78 LTGQKWRQKHITYSVHNYTPKVGELD-------TRRAIRQAFDVWQRVTPLTFEEVPYHE 130
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + D+
Sbjct: 131 IKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNSN 190
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 191 HDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 231
>gi|332558957|ref|ZP_08413279.1| glycoside hydrolase family protein [Rhodobacter sphaeroides WS8N]
gi|332276669|gb|EGJ21984.1| glycoside hydrolase family protein [Rhodobacter sphaeroides WS8N]
Length = 475
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 55/210 (26%), Gaps = 8/210 (3%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ T+ + + G+SG D++ G N+ + D G +G DT+
Sbjct: 220 LPSDSTVFGKAGADDLRGTSGEDLLYGFGGNDTLRGGAAADRMIGGTGNDTYIVDH--AG 277
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
++ + + VERL I+ ++L + L
Sbjct: 278 DEVVERAGEGLDRVCASVSHQLAAHVERLVLTGTAAINGAGNGLANVLLGNGAANRLSGG 337
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
G D E G D D D L G+DR
Sbjct: 338 GGNDRLEGRDGSDVLNGGTGHDTLIGGAGHDRLAGGTGSDRLVGGSGNDRLDGGIDRDVL 397
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADA 459
G + F A D
Sbjct: 398 TGGAGADTFVFAAGYGRDVITDFRVGNGGD 427
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 2/120 (1%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ G + L + + + G N + + + G +G+D +IG + ++
Sbjct: 311 TAAINGAGNGLANVLLGNGAANRLSGGGGNDRLEGRDGSDVLNGGTGHDTLIGGAGHDRL 370
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G+D G SG D + A A + +D ++D D+
Sbjct: 371 AGGTGSDRLVGGSGNDRL--DGGIDRDVLTGGAGADTFVFAAGYGRDVITDFRVGNGGDR 428
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+ + GG + ++ S + G + T+ + + G +G+D ++G S N
Sbjct: 327 GNGAANRLSGGGGNDRLEGRDGS-DVLNGGTGHDTLIGGAGHDRLAGGTGSDRLVGGSGN 385
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ DV G +G DTF + A I F
Sbjct: 386 DRLDGGIDRDVLTGGAGADTFVFAAGYGRDVITDFRVG 423
Score = 38.2 bits (87), Expect = 4.8, Method: Composition-based stats.
Identities = 32/260 (12%), Positives = 44/260 (16%), Gaps = 49/260 (18%)
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
VE +R L T+ + L G D G D
Sbjct: 215 VENIRLPSDSTVFGKAGADD-LRGTSGEDLLYGFGGNDTLRGGAAADRMIGGTGNDTYI- 272
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+ G R G DR A+ + E
Sbjct: 273 -VDHAGDEVVERAGEGLDRVCASVSHQLAAHVE--------------------------- 304
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
G L + G G
Sbjct: 305 --------RLVLTGTAAINGAGNGLANVLLGNGAANRLSGGGGNDRLE--GRDGSDVLNG 354
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHF-------SNFGYEEGRSITFNPDLYL 573
L A H+ L + +G D G + F
Sbjct: 355 GTGHDTLIGGAGHDRLAGGTGSDRLVGGSGNDRLDGGIDRDVLTGGAGADTFVFAAGYGR 414
Query: 574 TSYDDLWNVFGSDRSAAAQH 593
D G+ H
Sbjct: 415 DVITDFR--VGNGGDRLEIH 432
>gi|330975557|gb|EGH75623.1| putative DMSO reductase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 286
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 91/239 (38%), Gaps = 41/239 (17%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSY 492
RN + Y ++H DL N D H+ N+G +G+ F +YL +Y
Sbjct: 59 RNSAFYDEAWYRSNHRDLKNLDIDFAL-------HYFNYGWRQGKSPSFGFSGDMYLAAY 111
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGR-----------NPDAFKALEYIASHEDLINAFA 541
D++ + HY T+G KE R N F Y +H +
Sbjct: 112 PDVKTI----DMNPLLHYETYGKKEKRYVIPYAVEAIYNSTYFDDAYYQKNHNGKSTSRL 167
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
+ KD+ N S F+ D YL SY D+ D H+ HG KE
Sbjct: 168 ASALDYITCKDNLRN------PSEHFDADAYLESYPDVK----EDGVMPLLHFELHGKKE 217
Query: 602 GRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMHDI 660
R G+S L++ + + ++S K+V L+ Y GDG D ++ + +
Sbjct: 218 NRTAGLSNP-------LAKFLTYENNSNISHATKRVCLFACYMGDGAIPDETIFLLEKV 269
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 66/182 (36%), Gaps = 19/182 (10%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL--YL 405
D N Y +++ DL + D+ ++ H++ +G +G+ +F YL
Sbjct: 53 DALEKIRNSAFYDEAWYRSNHRDLKNL---DIDFAL-HYFNYGWRQGKSPSFGFSGDMYL 108
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE-YIASHEDLINAFADAPDLVQ 464
+Y D++ + HY T+G KE R + Y +++ D +
Sbjct: 109 AAYPDVKTI----DMNPLLHYETYGKKEKRYVIPYAVEAIYNSTYFDDAYYQKNHNGKST 164
Query: 465 VGKDHFSNF----GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
++ FD+ YL SY D++ D H+ HG KE R
Sbjct: 165 SRLASALDYITCKDNLRNPSEHFDADAYLESYPDVKE----DGVMPLLHFELHGKKENRT 220
Query: 521 PD 522
Sbjct: 221 AG 222
>gi|254425783|ref|ZP_05039500.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196188206|gb|EDX83171.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 759
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 64/217 (29%), Gaps = 6/217 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ S ++ + G + L + G N ++
Sbjct: 477 GADPSGSRSGESYVVFGAADITPFARPRFGTNGDDTLLGGRDKDILFGLAGNDFLSGGNG 536
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G S ND + G N++ GND+ DG G D F + R +N +
Sbjct: 537 NDTLFGGSDNDTLDGGKGNDLLDGGKGNDLLDGGRGSD-FLFGGSGSDTLFGRADNDTLD 595
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D + L IL A + L G D +
Sbjct: 596 GSHGNDTLDGGRGNDTLDGGRGSDVLFGNDGNDILFGEADNDTLDGGKGNDTLDGGGGND 655
Query: 388 EFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDR 419
+GRD+ D+ + G+ D L G D
Sbjct: 656 LLTGGDGRDVLLGGDGDDTLIGGGNNDMLTGGSGRDT 692
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 55/173 (31%), Gaps = 7/173 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T++ +D LD GG N + + + G + + +
Sbjct: 527 GNDFLSGGNGNDTLFGGSDNDTLD----GGKGNDLLDGGKGNDLLDGGRGSDFLFGGSGS 582
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G + ND + G+ N+ GND DG G D + ++ + +
Sbjct: 583 DTLFGRADNDTLDGSHGNDTLDGGRGNDTLDGGRGSD--VLFGNDGNDILFGEADNDTLD 640
Query: 329 DANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ D + L D + L + + L G+D F
Sbjct: 641 GGKGNDTLDGGGGNDLLTGGDGRDVLLGGDGDDTLIGGGNNDMLTGGSGRDTF 693
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 5/118 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
S T+ G+D LD L G N I ++ G + N T+
Sbjct: 591 NDTLDGSHGNDTLDGGRGNDTLDGGRGSDVLFGNDGNDILFGEADNDTLDGGKGNDTLDG 650
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G G DV++G ++ ND+ G SG DTF + I F+
Sbjct: 651 GGGNDLLTGGDGRDVLLGGDGDDTLIGGGNNDMLTGGSGRDTFVLSLDDGVDTITDFD 708
>gi|209542689|ref|YP_002274918.1| glycosyl transferase family 2 [Gluconacetobacter diazotrophicus PAl
5]
gi|209530366|gb|ACI50303.1| glycosyl transferase family 2 [Gluconacetobacter diazotrophicus PAl
5]
Length = 1075
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 70/218 (32%), Gaps = 36/218 (16%)
Query: 381 ESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNP 437
+ + +F +FG+ G FD Y ++ D+ + HY+T G +
Sbjct: 149 DVVAYFRDFGIGLGHSPNPFFDEAWYRTAHPDIARLIADGVVQNGFVHYLTTGFADRSPH 208
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR------------------ 479
F + Y +H DL + DH+ G G
Sbjct: 209 WLFDSGLYRRAHPDLSPEGLA-IRGYRNLYDHYLEVGDPSGLRGQWLFDPSGRFRQVAAS 267
Query: 480 ----------FVTFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA-FKAL 527
FD+ YL +Y ++ + + + A HY+ + F
Sbjct: 268 LPHVAPTLSLSPCFDAIWYLKTYPEVAALIAAGAYSCALHHYLANPTPTRFCATPWFSED 327
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
Y +ED+ +A + G +HF FG E R
Sbjct: 328 YYRVFYEDVDSALRNGTFRT--GYEHFLEFGLREWRRP 363
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 81/243 (33%), Gaps = 45/243 (18%)
Query: 399 FDSYLYLGSYDDLRN---VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
FD Y +Y + G D A + G+ G +P+ F Y +H D+
Sbjct: 126 FDPDWYRAAYPFVAEQMVFLGCDDVVAY--FRDFGIGLGHSPNPFFDEAWYRTAHPDIAR 183
Query: 455 AFADAPDLVQVGKDHFSNFGCEE-GRFVTFDSYLYLGSYDDLRNVFGSDRGAA--ARHYI 511
AD G H+ G + FDS LY ++ DL + RG HY+
Sbjct: 184 LIADGVVQ--NGFVHYLTTGFADRSPHWLFDSGLYRRAHPDLSPEGLAIRGYRNLYDHYL 241
Query: 512 THGVKEGR------NPDA---------------------FKALEYIASHEDLINAFADAP 544
G G +P F A+ Y+ ++ ++ A
Sbjct: 242 EVGDPSGLRGQWLFDPSGRFRQVAASLPHVAPTLSLSPCFDAIWYLKTYPEVAALIAA-- 299
Query: 545 DLVQAGKDHFSNFGYEEGR---SITFNPDLYLTSYDDLWNVFGSD-RSAAAQHYITHGMK 600
H+ R + F+ D Y Y+D+ + + +H++ G++
Sbjct: 300 GAYSCALHHYLAN-PTPTRFCATPWFSEDYYRVFYEDVDSALRNGTFRTGYEHFLEFGLR 358
Query: 601 EGR 603
E R
Sbjct: 359 EWR 361
>gi|320324247|gb|EFW80326.1| calcium binding hemolysin protein, putative [Pseudomonas syringae pv.
glycinea str. B076]
Length = 4096
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 66/454 (14%), Positives = 115/454 (25%), Gaps = 75/454 (16%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
S S DV G G T+ + G N
Sbjct: 625 SGGAGADLLAGGSGNDYLFGDAGDDVLNGGAGNDTLSGGEGSDTYRFSRGWGQDTISNYD 684
Query: 144 YPVYGVDNDYEND-----------SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
D + S+ V++ D + +S+ + ++
Sbjct: 685 PSTDKSDAIEFSSDILPGDIVVTRSYDDLVLTLRGTTDQISVSSYFGSDGLSSYQLETIR 744
Query: 193 KIYGA--------------PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
G G+ Y + ++Y G+D+L G
Sbjct: 745 FADGTSWSLDQIKSQAVLSTDGNDSIRGYATDDTLSGGLGDDSLYGQAGNDVLK----GD 800
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
N I E S+ G + ++ + + G SGND + G++ ++V +GND
Sbjct: 801 AGNDILYGAEGADSLSGGDGQDNLSGGAGADLLAGGSGNDYLFGDAGDDVLDGGAGNDTL 860
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD------------------ 340
G G DT+ + I ++ + DA E D L
Sbjct: 861 SGGEGSDTYRFSRGWGQDTISNYDPSTNKSDAIEFASDILPGDIVVTRSYDDLVLTLRGT 920
Query: 341 -------------------VERLRFADQC---------IDSVNVKQRSILEYTASYEDLI 372
+E +RFAD + ++ + A+ + L
Sbjct: 921 TDQISVSSYFGSDGLSSYQLETIRFADGTSWSLDQIKSLAVLSTDGNDSIRGYATDDTLN 980
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+G D+ G DI + S A G
Sbjct: 981 GGLGDDLLYGQAGNDVLKGDAGNDILSGADGADSLSGGDGQDNLSGGAGADLLAGGSGND 1040
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
L+ A ++ L G
Sbjct: 1041 YLYGDTGDDVLDGGAGNDALSGGEGSDIYRFSRG 1074
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 65/457 (14%), Positives = 112/457 (24%), Gaps = 66/457 (14%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
I + S DV G G T+ + G
Sbjct: 417 GDAGNDILYGAAGADSLSGGSGNDYLFGDAGDDVLNGGAGNDTLSGGEGSDTYRFSRGWG 476
Query: 136 HPGSYNGGYPVYGVDNDYEND-----------SFLTSVMSYFMPQDSMMDASFGYCATPM 184
N D S+ V++ D + +S+
Sbjct: 477 QDTISNYDPSTDKSDAIEFASDILPGDIVVTRSYDDLVLTLRGTTDQISVSSYFGSDGLS 536
Query: 185 VSDIVAVQKIYGA--------------PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL 230
+ ++ G G+ Y + ++Y G+D+
Sbjct: 537 SYQLETIRFADGTSWSLDQVKSMAVLSTDGNDSIRGYATDDTLSGGLGDDSLYGQAGNDV 596
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L G N I E S+ G + ++ + + G SGND + G++ ++V
Sbjct: 597 LK----GDAGNDILYGAEGGDSLSGGDGQDNLSGGAGADLLAGGSGNDYLFGDAGDDVLN 652
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---------- 340
+GND G G DT+ + I ++ + DA E D L
Sbjct: 653 GGAGNDTLSGGEGSDTYRFSRGWGQDTISNYDPSTDKSDAIEFSSDILPGDIVVTRSYDD 712
Query: 341 ---------------------------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+E +RFAD S++ + + T + +
Sbjct: 713 LVLTLRGTTDQISVSSYFGSDGLSSYQLETIRFADGTSWSLDQIKSQAVLSTDGNDSIRG 772
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
D G D+ Y S G
Sbjct: 773 YATDDTLSGGLGDDSLYGQAGNDVLKGDAGNDILYGAEGADSLSGGDGQDNLSGGAGADL 832
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L A + L + G D +
Sbjct: 833 LAGGSGNDYLFGDAGDDVLDGGAGNDTLSGGEGSDTY 869
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 61/441 (13%), Positives = 105/441 (23%), Gaps = 49/441 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + S S DV G G T+ + G
Sbjct: 234 SGGDDQDNLSGGNGADLLAGGSGNDYLSGEAGDDVLNGGAGNDTLSGGEGSDTYRFSRGW 293
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTS---VMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
N D L + + + + +
Sbjct: 294 GQDTISNYDPSTNKSDAIEFASDILPGDIVITRSYDDLVLTLRGTTDQITVASYFGSDGL 353
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ ++ + + DS D TL GG+ + +
Sbjct: 354 SSYQLETIRFADGTSWALDQVKSLAVLSTDGNDSIRGYASDDTLNGGLGDDVLYGLAGND 413
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N + +S+ G SGND + G++ ++V +GND G G DT+ +
Sbjct: 414 VLKGDAGNDILYGAAGADSLSGGSGNDYLFGDAGDDVLNGGAGNDTLSGGEGSDTYRFSR 473
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD------------------------------- 340
I ++ + DA E D L
Sbjct: 474 GWGQDTISNYDPSTDKSDAIEFASDILPGDIVVTRSYDDLVLTLRGTTDQISVSSYFGSD 533
Query: 341 ------VERLRFADQC---------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+E +RFAD + ++ + A+ + L +G D
Sbjct: 534 GLSSYQLETIRFADGTSWSLDQVKSMAVLSTDGNDSIRGYATDDTLSGGLGDDSLYGQAG 593
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
G DI + + S A G L
Sbjct: 594 NDVLKGDAGNDILYGAEGGDSLSGGDGQDNLSGGAGADLLAGGSGNDYLFGDAGDDVLNG 653
Query: 446 IASHEDLINAFADAPDLVQVG 466
A ++ L G
Sbjct: 654 GAGNDTLSGGEGSDTYRFSRG 674
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 53/329 (16%), Positives = 102/329 (31%), Gaps = 41/329 (12%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ S T+ + +D++D L N ++ G + + T+ + ++G
Sbjct: 3705 QGSDGDDTLSGTSSNDVIDAGLGDDTVN----GGGGDDTLKGNDGSDTLNGGDGNDLLLG 3760
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF------------ 321
+GND + GN N+V +GNDV +G +G DT+ + S +
Sbjct: 3761 GAGNDALNGNDGNDVLDAGAGNDVLNGGNGNDTYLFGKGSGQDTVNNGGEVRIGKTDTLK 3820
Query: 322 -----------------------ENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNV 356
++ + A+ D + ++R++FAD +
Sbjct: 3821 LTDLNAADVQVTRENNDLLIQVIGSSDSLRVASHFAGDATAGYEIDRIQFADGSEWNQTT 3880
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ ++++ T S + L DV + ++G D Y D+ N
Sbjct: 3881 IKSNVIQSTDSDDTLRGFATDDVISAGLGDDAIYGADGNDTLSGGDGIDALYGDVGNDHL 3940
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
Y G AL + D V SN +
Sbjct: 3941 LGDAGNDTLYGGAGDDLLDGGAGNDALTGSEGSDTYAFGVGGGKDSVNNYDASTSNDTVQ 4000
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
V+ + + S +DL
Sbjct: 4001 FDASVSLEELWFRRSGNDLEVSIVDTPDK 4029
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 68/503 (13%), Positives = 125/503 (24%), Gaps = 40/503 (7%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+D F + + D G G T+ + G
Sbjct: 3508 ADGSFWDQTAIKTQIMQGTAADETLSGTSADDTIDAGAGDDTVNGMAGSDTLSGGAGADT 3567
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+G + G +D + V+ D + + IY
Sbjct: 3568 LNGNDGNDVLQGGADDVLYGGDGSDVLDGGAGNDRLDGGAGDDIYIFGKG--AGQDSIYY 3625
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A + G S T G DL + + ++ G
Sbjct: 3626 ANETRAGKMDTVRLTDLNASDVSVT---RDGMDLFIRVNGTTDSLRVIYHFLGDATAGYQ 3682
Query: 257 EKNMTIAQHTVIESVV-------GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ A + ++ GS G+D + G S+N+V G+D +G G DT
Sbjct: 3683 IDRIQFADGSFLDQAAIKFQVLQGSDGDDTLSGTSSNDVIDAGLGDDTVNGGGGDDTL-- 3740
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + ++ +L+ A +
Sbjct: 3741 KGNDGSDTLNGGDGNDLLLGGA-----------------GNDALNGNDGNDVLDAGAGND 3783
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G D + K + ++ G ++ L D R
Sbjct: 3784 VLNGGNGNDTYLFGKGSGQDTVNNGGEVRIGKTDTLKLTDLNAADVQVTRENNDLLIQVI 3843
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPD-LVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G + + A + A +E FAD + K + + F +
Sbjct: 3844 GSSDSLRVASHFAGDATAGYEIDRIQFADGSEWNQTTIKSNVIQSTDSDDTLRGFATDDV 3903
Query: 489 LGSYDDLRNVFGSDRGAAARH-------YITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
+ + ++G+D Y G L A + L
Sbjct: 3904 ISAGLGDDAIYGADGNDTLSGGDGIDALYGDVGNDHLLGDAGNDTLYGGAGDDLLDGGAG 3963
Query: 542 DAPDLVQAGKDHFSNFGYEEGRS 564
+ G D + FG G+
Sbjct: 3964 NDALTGSEGSDTY-AFGVGGGKD 3985
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 59/452 (13%), Positives = 114/452 (25%), Gaps = 57/452 (12%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + D+ GIG + + G
Sbjct: 2987 SGGGGNDTLLGGAGADRLNGDDGNDLLQGGTGNDILNGGIGNDILDGGAGNDRLDGGAG- 3045
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+Y G Y ++ V + + D + A ++ I
Sbjct: 3046 --DDAYLFGKGSGQDTIYYAYEARAGKVDTVKLSDLKASDITISRDAADLIIRINDTTDS 3103
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS-------GGDDLLDLTLIGGVKNYIDLNT 247
G+ ++ + S G D D +L G + I
Sbjct: 3104 MRVLNHFAGDAATGYQIDRIQFADGSFWDQSIIKLQVLKGSDA-DQSLTGYAGDDIIDAG 3162
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL--- 304
++ G N T++ + ++++ G G+D + G + N+ +G+D+ DG +G
Sbjct: 3163 AGDDAVSGGAGNDTLSGGSGLDTISGDEGDDNLNGGAGNDTLNGGTGDDILDGGAGNDLL 3222
Query: 305 ------DTFFYYAPSYLYKIY-------------------------------------RF 321
DT+ + S IY
Sbjct: 3223 NGGAGDDTYLFGKGSGQDSIYYANESRLGKLDTVKLLGLNPSDVTISRDGYDLILKVNGT 3282
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+++ +Y ++R++FAD + +L T + + L DV
Sbjct: 3283 TDSLRIYYHFMGDATSGYQIDRIQFADGSFWDQTFIKTEVLRSTDANQSLTGYETDDVIN 3342
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ S G D N A G +
Sbjct: 3343 AGVGDDSISGSGGNDTLSGEAGDDTVSGGTGNDTLIGGSGADTLNGDDGDDLLQGGVGND 3402
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
L ++ L + G D +
Sbjct: 3403 NLYGGNGNDVLDGGSGNDLLNGGNGDDTYLFG 3434
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 62/444 (13%), Positives = 118/444 (26%), Gaps = 20/444 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + + D + +G G G + A L +
Sbjct: 3197 GGAGNDTLNGGTGDDILDGGAGNDLLNGGAGDDTYLFGKGSGQDSIYYANESRLGKLDTV 3256
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV---- 191
N D + S + M DA+ GY + +
Sbjct: 3257 KLLGLNPSDVTISRDGYDLILKVNGTTDSLRIYYHFMGDATSGYQIDRIQFADGSFWDQT 3316
Query: 192 ---QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
++ + + Y+ + +I SGG+D L
Sbjct: 3317 FIKTEVLRSTDANQSLTGYETDDVINAGVGDDSISGSGGNDTLS-------------GEA 3363
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G N T+ + +++ G G+D++ G N+ + +GNDV DG SG D
Sbjct: 3364 GDDTVSGGTGNDTLIGGSGADTLNGDDGDDLLQGGVGNDNLYGGNGNDVLDGGSGNDLLN 3423
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
Y + VY ANE + D L V+ + + ++ +
Sbjct: 3424 GGNGDDTYLFGKGSGQDRVYYANETRADKLDTVKLIDLNAGDVSLSRDGYDLVIRVNGTT 3483
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L V + + + + + +A
Sbjct: 3484 DSLRVVYHFMGDATAGYQIDHIQFADGSFWDQTAIKTQIMQGTAADETLSGTSADDTIDA 3543
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+ N A + D +N L D + +
Sbjct: 3544 GAGDDTVNGMAGSDTLSGGAGADTLNGNDGNDVLQGGADDVLYGGDGSDVLDGGAGNDRL 3603
Query: 489 LGSYDDLRNVFGSDRGAAARHYIT 512
G D +FG G + +Y
Sbjct: 3604 DGGAGDDIYIFGKGAGQDSIYYAN 3627
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 83/583 (14%), Positives = 139/583 (23%), Gaps = 110/583 (18%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D S + + + +D +R+ G G N I + +
Sbjct: 53 GGDGNDYLSGDAGDDVLDGGAGNDTLSGGEDSDTYRFSRGWGQDTIGNYDAGINKSDAIE 112
Query: 136 HPGSYNGGYPVYGVDND-----YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G V D + +V SYF + +
Sbjct: 113 FASDILPGDIVVTRSYDDLVLALNGSTDKITVSSYFSNDGDSAYKLEEIRFADGTNWSLD 172
Query: 191 VQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
K ++++ + +Y G+D+L G N I +
Sbjct: 173 QVKSLAVLSTDGNDSVWGYASDDTLSGGLGDDVLYGLAGNDVLK----GDAGNDILYGAD 228
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S+ G + ++ + + G SGND + G + ++V +GND G G DT+
Sbjct: 229 GADSLSGGDDQDNLSGGNGADLLAGGSGNDYLSGEAGDDVLNGGAGNDTLSGGEGSDTYR 288
Query: 309 YYAPSYLYKIYRFENAII-----------------------------------VYDANEH 333
+ I ++ + + A+
Sbjct: 289 FSRGWGQDTISNYDPSTNKSDAIEFASDILPGDIVITRSYDDLVLTLRGTTDQITVASYF 348
Query: 334 KQDFLSD--VERLRFADQC---------------------------IDSVNVKQRSILEY 364
D LS +E +RFAD +L
Sbjct: 349 GSDGLSSYQLETIRFADGTSWALDQVKSLAVLSTDGNDSIRGYASDDTLNGGLGDDVLYG 408
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDR 419
A + L G D+ G D F D D L GSD
Sbjct: 409 LAGNDVLKGDAGNDILYGAAGADSLSGGSGNDYLFGDAGDDVLNGGAGNDTLSGGEGSDT 468
Query: 420 GAAARHYITHG----------------VKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
+R + + D Y L
Sbjct: 469 YRFSRGWGQDTISNYDPSTDKSDAIEFASDILPGDIVVTRSYDDLVLTLRGTTDQISVSS 528
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLY---------LGSYDDLRNVFGSDRGAA-----ARH 509
G D S++ E RF S+ +D + +D +
Sbjct: 529 YFGSDGLSSYQLETIRFADGTSWSLDQVKSMAVLSTDGNDSIRGYATDDTLSGGLGDDSL 588
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
Y G + L + L AG D
Sbjct: 589 YGQAGNDVLKGDAGNDILYGAEGGDSLSGGDGQDNLSGGAGAD 631
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 68/496 (13%), Positives = 123/496 (24%), Gaps = 32/496 (6%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
T + AD G + + +G +GG
Sbjct: 2980 AAGDDTVSGGGGNDTLLGGAGADRLNGDDGNDLLQGGTGNDILNGGIG---NDILDGGAG 3036
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
+D +D++L S +A G T +SD+ A +
Sbjct: 3037 NDRLDGGAGDDAYLFGKGSGQDTIYYAYEARAGKVDTVKLSDLKASDI---TISRDAADL 3093
Query: 206 IYKIEVQQKDSPFIQTIYDSGGD----DLLDLTLIGGVKNYIDL-----NTESWSSIGGY 256
I +I + D + I +++ S+ GY
Sbjct: 3094 IIRINDTTDSMRVLNHFAGDAATGYQIDRIQFADGSFWDQSIIKLQVLKGSDADQSLTGY 3153
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ I ++V G +GND + G S + G+D +G +G DT +
Sbjct: 3154 AGDDIIDAGAGDDAVSGGAGNDTLSGGSGLDTISGDEGDDNLNGGAGNDTL--NGGTGDD 3211
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ ++ F L+ +
Sbjct: 3212 ILDGGAGNDLLNGGAGDDT--------YLFGKGSGQDSIYYANESRLGKLDTVKLLGLNP 3263
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI---THGVKE 433
DV S + G T +Y D + + DR A T E
Sbjct: 3264 SDVTISRDGYDLILKVNG--TTDSLRIYYHFMGDATSGYQIDRIQFADGSFWDQTFIKTE 3321
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+D+INA + G + + + L
Sbjct: 3322 VLRSTDANQSLTGYETDDVINAGVGDDSISGSGGNDTLSGEAGDDTVSGGTGNDTLIGGS 3381
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ G D + G + L+ + ++ L D L G
Sbjct: 3382 GADTLNGDDGDDLLQ--GGVGNDNLYGGNGNDVLDGGSGNDLLNGGNGDDTYLFGKGSGQ 3439
Query: 554 FSNFGYEEGRSITFNP 569
+ E R+ +
Sbjct: 3440 DRVYYANETRADKLDT 3455
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 72/276 (26%), Gaps = 37/276 (13%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L G N + S+ G ++ + + G GND + G++ ++V
Sbjct: 12 DDILNGDAGNDFLYGAKGTDSLSGGGGQDNLSGGAGADLLAGGDGNDYLSGDAGDDVLDG 71
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD----------- 340
+GND G DT+ + I ++ I DA E D L
Sbjct: 72 GAGNDTLSGGEDSDTYRFSRGWGQDTIGNYDAGINKSDAIEFASDILPGDIVVTRSYDDL 131
Query: 341 --------------------------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+E +RFAD S++ + + T + +
Sbjct: 132 VLALNGSTDKITVSSYFSNDGDSAYKLEEIRFADGTNWSLDQVKSLAVLSTDGNDSVWGY 191
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
D G D+ Y S +G
Sbjct: 192 ASDDTLSGGLGDDVLYGLAGNDVLKGDAGNDILYGADGADSLSGGDDQDNLSGGNGADLL 251
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L A + L + G D +
Sbjct: 252 AGGSGNDYLSGEAGDDVLNGGAGNDTLSGGEGSDTY 287
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 68/477 (14%), Positives = 124/477 (25%), Gaps = 86/477 (18%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
I S + AD+ G G + + G
Sbjct: 999 GDAGNDILSGADGADSLSGGDGQDNLSGGAGADLLAGGSGNDYLYGDTGDDVLDGGAG-N 1057
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD---------SMMDASFGYCATPMVS 186
S G +Y + D+ S + + Y +
Sbjct: 1058 DALSGGEGSDIYRFSRGWGQDTISNYDPSTNKSDAIEFASDILPGDIVVTRSYDDLVLAL 1117
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD---------SGGDDLL-----D 232
+ A + + + G+N YK++ + + G+D+L D
Sbjct: 1118 NGSADKITVSSYFSNDGDNAYKLDEIRFADGTTWKPDQVKTMAAFKSTDGNDVLTGYASD 1177
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
++ GG+ N ++ G N T+ + + G + D++ G + N+
Sbjct: 1178 DSISGGLGNDTIYGRAGNDTLSGEAGNDTLYGEDGNDLLNGGADADLLYGGNGNDTLDGG 1237
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIY--------------------------------- 319
GND DG G DT+ S +I
Sbjct: 1238 GGNDTLDGGMGSDTYVLRKGSGQDQINNYTSDDKTAQKIDKVKLDGLNPADITVHREYND 1297
Query: 320 ------RFENAIIVYDANEHKQDFLSDVERLRFADQCI------------------DSVN 355
++I V D + V++L+FAD + +
Sbjct: 1298 LVIQIKSTGDSIRVNSHFNQDGDSVYAVDQLQFADSTVWDGAKLKTEVLKTTGDNDTIIG 1357
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-----TFDSYLYLGSYDD 410
+ L A + L G D + EG D D+ D
Sbjct: 1358 YQTADQLFGLAGNDTLSGRGGDDFLDGGAGKDTLNGEEGSDTLLGGADNDTLSGGEGNDL 1417
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
L G+D A T+ + G D ++ D+ + +
Sbjct: 1418 LDGGTGNDSLAGGLGSDTYVFRRGSGQDTIYNSVSNEANTDIQDVIVLEGLKPEDVV 1474
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/514 (9%), Positives = 119/514 (23%), Gaps = 28/514 (5%)
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVW 110
+ ++A G + + E +D + D
Sbjct: 3301 QIDRIQFADGSFWDQTFIK-TEVLRSTDANQSLTGYETDDVINAGVGDDSISGSGGNDTL 3359
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
G T+ + G +G + G + + + +
Sbjct: 3360 SGEAGDDTVSGGTGNDTLIGGSGADTLNGDDGDDLLQGGVGNDNLYGGNGNDVLDGGSGN 3419
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG--NNIYKIEVQQKDSPFIQTIYDSGGD 228
+++ G T + ++Y A + + + I++ D + G
Sbjct: 3420 DLLNGGNG-DDTYLFGKGSGQDRVYYANETRADKLDTVKLIDLNAGDVSLSR-----DGY 3473
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES-------VVGSSGNDVVI 281
DL+ + + ++ G ++ A + + + G++ ++ +
Sbjct: 3474 DLVIRVNGTTDSLRVVYHFMGDATAGYQIDHIQFADGSFWDQTAIKTQIMQGTAADETLS 3533
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G SA++ +G+D +G +G DT + + + ++ +
Sbjct: 3534 GTSADDTIDAGAGDDTVNGMAGSDTL--SGGAGADTLNGNDGNDVLQGGADDVLYGGDGS 3591
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ L I + + D+
Sbjct: 3592 DVLDGGAGNDRLDGGAGDDIYIFGKGAGQDSIYYANETRAGKMDTVRL-----TDLNASD 3646
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
DL + Y H + + +++ A
Sbjct: 3647 VSVTRDGMDLFIRVNGTTDSLRVIY--HFLGDATAGYQIDRIQFADGSFLDQAAIKFQVL 3704
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
G D S + G D G
Sbjct: 3705 QGSDGDDTLSGTSSNDVIDAGLGDDTVNGGGGDDTLKGNDGSDTLN---GGDGNDLLLGG 3761
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
AL ++ L + G D +
Sbjct: 3762 AGNDALNGNDGNDVLDAGAGNDVLNGGNGNDTYL 3795
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 47/374 (12%), Positives = 93/374 (24%), Gaps = 69/374 (18%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G V + I +S + G N T++ ++++G G D++ G N++ +GND
Sbjct: 2467 GTVGDDIIFGYDSADVLKGASGNDTLSGRAGNDALLGGEGKDMLNGEDGNDILDGGAGND 2526
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAII------------------------------ 326
+G G DT+ + + + +
Sbjct: 2527 TLNGGYGSDTYVFRRGAGQDTVNNYAYNDTTPNKLDVVKLEGLNPADVLLRREVNDLIIQ 2586
Query: 327 ---------VYDANEHKQDFLSDVERLRFADQCI-------------------DSVNVKQ 358
V +++L+F D I + +
Sbjct: 2587 IKSTGETLKVSSHFSTSAILGYTIDQLQFDDGTIWNTTDISSNLAGQTSVDPLNLAGTGE 2646
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+L A + L G DV + G DI G+ D + +
Sbjct: 2647 NDVLAGGAGNDTLSGAAGDDVLDGRTGNDRLDGGAGDDIYL---FGKGAGQDTISSYEGR 2703
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
G +T + I + + + G +
Sbjct: 2704 VGKLDTVRLTALNASDISLVRDANDLVINVN------GTADSLRISNHFIGEATSGYQID 2757
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
R D + + G+ Y + + A ++ L
Sbjct: 2758 RIQFADGTFWDQGTVKSEVLRGTAADQTLAGYQAD--DQIDAGAGDDIVSGGAGNDTLKG 2815
Query: 539 AFADAPDLVQAGKD 552
+ G D
Sbjct: 2816 GIGSDTLNGEEGND 2829
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 61/502 (12%), Positives = 131/502 (26%), Gaps = 43/502 (8%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYNGG 143
D+ D G G+ + + G L +
Sbjct: 10 AGDDILNGDAGNDFLYGAKGTDSLSGGGGQDNLSGGAGADLLAGGDGNDYLSGDAGDDVL 69
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
G D + T S QD++ + G + + + S
Sbjct: 70 DGGAGNDTLSGGEDSDTYRFSRGWGQDTIGNYDAGINKSDAIEFASDILPGDIVVTRSYD 129
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + + G + L+ ++ + N ++
Sbjct: 130 DLVLALNGSTDKITVSSYFSNDGDSAYKLEEIRFADGTNWSLDQVKSLAVLSTDGNDSVW 189
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ +++ G G+DV+ G + N+V +GND+ G+ G D+ +
Sbjct: 190 GYASDDTLSGGLGDDVLYGLAGNDVLKGDAGNDILYGADGADSL--SGGDDQDNLSGGNG 247
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
A ++ + + +L A + L G D +
Sbjct: 248 ADLLAGGSGNDY-----------------LSGEAGDDVLNGGAGNDTLSGGEGSDTYRFS 290
Query: 384 KHFYEFGLSE-------------GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ + + +S DI + SYDDL +
Sbjct: 291 RGWGQDTISNYDPSTNKSDAIEFASDILPGDIVITRSYDDLVLTLRGTTDQITVAS--YF 348
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF-DSYLYL 489
+G + + + + ++ L G D + ++ D LY
Sbjct: 349 GSDGLSSYQLETIRFADGTSWALDQVKSLAVLSTDGNDSIRGYASDDTLNGGLGDDVLYG 408
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
+ +D+ Y G L A + L +
Sbjct: 409 LAGNDVLK----GDAGNDILYGAAGADSLSGGSGNDYLFGDAGDDVLNGGAGNDTLSGGE 464
Query: 550 GKDHFS-NFGYEEGRSITFNPD 570
G D + + G+ + ++P
Sbjct: 465 GSDTYRFSRGWGQDTISNYDPS 486
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 83/302 (27%), Gaps = 74/302 (24%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G+D L + G + T+
Sbjct: 1535 GDDNITGYETADMLKGLRGNDTLS-------------GRAGDDVLDGGDGRDTLNGEDGN 1581
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF------- 321
++++G +GND++ G + ++V SGND G G DT+ + S I +
Sbjct: 1582 DTLLGGAGNDMLSGGNGDDVMDGGSGNDTLSGGGGSDTYIFRKGSGQDTILNYAYSDATQ 1641
Query: 322 ------------------------------ENAIIVYDANEHKQDFLSDVERLRFAD--- 348
+ + ++ D +++++F+D
Sbjct: 1642 NKLDVVKLEGLTASQVSIRREGDDLIFQISDTGETLRVSSHFSSD-AYAIDQVQFSDGIF 1700
Query: 349 ---------------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
L A ++ L G D+ + + +
Sbjct: 1701 WDKTQITAALLVGTAGDDSITGYATEDKLSGLAGHDTLSGRAGNDILDGGEGNDTLYGED 1760
Query: 394 GRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G D D+ D L G D A + T+ ++G D Y +
Sbjct: 1761 GSDTLLGGKGNDALSGGDGNDLLDGGVGMDSLAGGKGSDTYTFRKGYGQDTINNSAYNDT 1820
Query: 449 HE 450
E
Sbjct: 1821 TE 1822
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/266 (12%), Positives = 67/266 (25%), Gaps = 26/266 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS-----------HN 123
D + + + D G+G T + +
Sbjct: 1208 YGEDGNDLLNGGADADLLYGGNGNDTLDGGGGNDTLDGGMGSDTYVLRKGSGQDQINNYT 1267
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
+ + + + N + + ++ S + D Y
Sbjct: 1268 SDDKTAQKIDKVKLDGLNPADITVHREYNDLVIQIKSTGDSIRVNSHFNQDGDSVYAVDQ 1327
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+ V GA + ++ G+D L
Sbjct: 1328 LQFADSTVWD--GAKLKTEVLKTTGDNDTIIGYQTADQLFGLAGNDTLS----------- 1374
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ G T+ ++++G + ND + G N++ +GND G G
Sbjct: 1375 --GRGGDDFLDGGAGKDTLNGEEGSDTLLGGADNDTLSGGEGNDLLDGGTGNDSLAGGLG 1432
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYD 329
DT+ + S IY + D
Sbjct: 1433 SDTYVFRRGSGQDTIYNSVSNEANTD 1458
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/304 (11%), Positives = 71/304 (23%), Gaps = 48/304 (15%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D ++ G ++ G N + +++ G G+D ++G N+
Sbjct: 1717 DDSITGYATEDKLSGLAGHDTLSGRAGNDILDGGEGNDTLYGEDGSDTLLGGKGNDALSG 1776
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV------------------------ 327
GND+ DG G+D+ S Y + +
Sbjct: 1777 GDGNDLLDGGVGMDSLAGGKGSDTYTFRKGYGQDTINNSAYNDTTENKLDVIRLEGLNVS 1836
Query: 328 ------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ +++L+FAD I + ++L
Sbjct: 1837 DVVIKRDSDDLLIQIKESGETLRVTSHFSASTIYGYAIDQLQFADGTILENAQIRAALLL 1896
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
T + + + DV G D D +
Sbjct: 1897 GTDADDVMTGYSTDDVIAGDGGNDTLSGGSGSDRIEGGDGKDNLSGDDGDDLLLGGSGDD 1956
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ +L + L + G D + +
Sbjct: 1957 SLSGGDANDTLKGGADNDSLSGGYGDDFLDGGSGNDTLYGGYGSDVYVFGHGSSQDTINN 2016
Query: 484 DSYL 487
+Y
Sbjct: 2017 SAYN 2020
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 72/276 (26%), Gaps = 62/276 (22%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N + G + T++ +++ G +GND + G N+ GND
Sbjct: 2117 GLGGNDTISGRGGDDVLDGGDGKDTLSGEDGNDTLFGGAGNDTLNGGYGNDSLDGGLGND 2176
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAII------------------------------ 326
G G D + + + I
Sbjct: 2177 SLSGGVGSDIYVFRKGAGQDTINNSAYNDTTVGKLDVIRFEGLNAEDISIRRESDDLILQ 2236
Query: 327 ---------VYDANEHKQDFLSDVERLRFADQCIDS------------------VNVKQR 359
V +++L+FAD + V
Sbjct: 2237 IKETGDTLRVTSHFSASAISGYAIDQLQFADGTLMDNSQIKLALLGGTEDDDTLVGYDTD 2296
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-----TFDSYLYLGSYDDLRNV 414
+L+ A +++ G D+ + EG D+ D+ D L
Sbjct: 2297 DVLKGLAGNDNISGRAGADILDGGAGKDSLYGDEGNDVLRGEADDDTLNGGIGDDLLDGG 2356
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G+D A T+ ++G D Y +
Sbjct: 2357 AGNDSLAGGSGSDTYVFRKGSGQDTINNSVYNDTTA 2392
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/254 (11%), Positives = 67/254 (26%), Gaps = 9/254 (3%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF- 307
+ G + + + + G+ G D + G + +G D+ G G D
Sbjct: 2 GDDLLYGLAGDDILNGDAGNDFLYGAKGTDSLSGGGGQDNLSGGAGADLLAGGDGNDYLS 61
Query: 308 ------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ + E++ + QD + + + I+ +
Sbjct: 62 GDAGDDVLDGGAGNDTLSGGEDSDTYRFSRGWGQDTIGNYDAGINKSDAIEFASDILPGD 121
Query: 362 LEYTASYEDLIQVI--GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+ T SY+DL+ + D +F G S + D
Sbjct: 122 IVVTRSYDDLVLALNGSTDKITVSSYFSNDGDSAYKLEEIRFADGTNWSLDQVKSLAVLS 181
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ + + + Y + D++ A L + G ++
Sbjct: 182 TDGNDSVWGYASDDTLSGGLGDDVLYGLAGNDVLKGDAGNDILYGADGADSLSGGDDQDN 241
Query: 480 FVTFDSYLYLGSYD 493
+ L
Sbjct: 242 LSGGNGADLLAGGS 255
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 63/511 (12%), Positives = 119/511 (23%), Gaps = 28/511 (5%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
SD F + + D G T+ + G
Sbjct: 1696 SDGIFWDKTQITAALLVGTAGDDSITGYATEDKLSGLAGHDTLSGRAGNDILDGGEGNDT 1755
Query: 137 PGSYNGGYPVYG---VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+G + G D D M + S Y
Sbjct: 1756 LYGEDGSDTLLGGKGNDALSGGDGNDLLDGGVGMDSLAGGKGSDTYTFRKGYGQDTINNS 1815
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
Y + + I + + + DDLL G + + + +
Sbjct: 1816 AYNDTTENKLDVI-----RLEGLNVSDVVIKRDSDDLLIQIKESGETLRVTSHFSASTIY 1870
Query: 254 GGYEKNMTIAQHTVIESV-------VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
G + A T++E+ +G+ +DV+ G S ++V GND G SG D
Sbjct: 1871 GYAIDQLQFADGTILENAQIRAALLLGTDADDVMTGYSTDDVIAGDGGNDTLSGGSGSDR 1930
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
++ ++ ++ ++ AD S L+ +
Sbjct: 1931 IEGGDGKDNLSGDDGDDLLLGGSGDDSLSGGDANDTLKGGADNDSLSGGY-GDDFLDGGS 1989
Query: 367 SYEDLIQVIGQDVFESMKH----FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L G DV+ + + L + D
Sbjct: 1990 GNDTLYGGYGSDVYVFGHGSSQDTINNSAYNDTTVNKLDVVRLEGLNQADVSLRRDSDDL 2049
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
G + Y + + L+ A V + E+ +
Sbjct: 2050 VIQIRDSGDTLRVASYFSSSAIYGYAVDQLLFADGS-TLNVDQLRAAILKGTQEDDSLIA 2108
Query: 483 FDSYLYLGSYD-------DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
F+S +L + G L ++
Sbjct: 2109 FESADFLNGLGGNDTISGRGGDDVLDGGDGKDTLSGEDGNDTLFGGAGNDTLNGGYGNDS 2168
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
L + G D + +I
Sbjct: 2169 LDGGLGNDSLSGGVGSDIYVFRKGAGQDTIN 2199
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 61/518 (11%), Positives = 121/518 (23%), Gaps = 50/518 (9%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+D F R + + D G G + + +G
Sbjct: 2762 ADGTFWDQGTVKSEVLRGTAADQTLAGYQADDQIDAGAGDDIVSGGAGNDTLKGGIGSDT 2821
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
G + G + + +D G + + IY
Sbjct: 2822 LNGEEGNDVLRGGAGNDILSGGAGDDTLDGGDGNDRLDGGAG-NDSYLFRKGAGQDTIYN 2880
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSIG 254
A + +G S + ++ + + ++++ T +
Sbjct: 2881 AYENRVGKLDRVKLTDLNASDVTLFQEGANLVIRINGSTDNLIVMNHFLNDATGGYQIDR 2940
Query: 255 GYEKNMTIAQHTVIES--VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + +VI++ + G+ G+ + G S +++ ++G+D G G DT A
Sbjct: 2941 IQFADGSFWNQSVIKARVLQGTDGDQSLTGYSTDDIIDVAAGDDTVSGGGGNDTLLGGAG 3000
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ RL D IL + L
Sbjct: 3001 AD----------------------------RLNGDDGNDLLQGGTGNDILNGGIGNDILD 3032
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D + + +G Y Y + V SD A+
Sbjct: 3033 GGAGNDRLDGGAGDDAYLFGKGSGQDTIYYAYEARAGKVDTVKLSDLKASDITISRDAAD 3092
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN----------FGCEEGRFVT 482
+ + +H A D +Q F + +
Sbjct: 3093 LIIRINDTTDSMRVLNHFAGDAATGYQIDRIQFADGSFWDQSIIKLQVLKGSDADQSLTG 3152
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARH-------YITHGVKEGRNPDAFKALEYIASHED 535
+ + + V G G L +
Sbjct: 3153 YAGDDIIDAGAGDDAVSGGAGNDTLSGGSGLDTISGDEGDDNLNGGAGNDTLNGGTGDDI 3212
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYL 573
L + AG D + SI + + L
Sbjct: 3213 LDGGAGNDLLNGGAGDDTYLFGKGSGQDSIYYANESRL 3250
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 62/518 (11%), Positives = 128/518 (24%), Gaps = 47/518 (9%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ D+ + D AD G G+ + + G + G
Sbjct: 989 YGQAGNDVLKGDAGNDILSGADGADSLSGGDGQDNLSGGAGADLLAGGSGNDYLYGDTGD 1048
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV-AVQKIYGAPKGSL 202
+ G + S + F S +T I A + G +
Sbjct: 1049 DVLDGGAGNDALSGGEGSDIYRFSRGWGQDTISNYDPSTNKSDAIEFASDILPGDIVVTR 1108
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + + + Y S D + + ++ ++
Sbjct: 1109 SYDDLVLALNGSADKITVSSYFSNDGDNAYKLDEIRFADGTTWKPDQVKTMAAFKS---- 1164
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ GNDV+ G ++++ GND G +G DT + +Y +
Sbjct: 1165 -----------TDGNDVLTGYASDDSISGGLGNDTIYGRAGNDTL--SGEAGNDTLYGED 1211
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
++ + L+ + L +G D +
Sbjct: 1212 GNDLLNGGADADL-----------------LYGGNGNDTLDGGGGNDTLDGGMGSDTYVL 1254
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG----AAARHYITHGVKEGRNPD 438
K + ++ + D N + G N
Sbjct: 1255 RKGSGQDQINNYTSDDKTAQKIDKVKLDGLNPADITVHREYNDLVIQIKSTGDSIRVNSH 1314
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDLR 496
+ + + + + L A + D ++ + G + T D L D L
Sbjct: 1315 FNQDGDSVYAVDQLQFADSTVWDGAKLKTEVLKTTGDNDTIIGYQTADQLFGLAGNDTLS 1374
Query: 497 NVFGSDRGAAARHYITHGVKEG----RNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G D T +EG L ++ L + G D
Sbjct: 1375 GRGGDDFLDGGAGKDTLNGEEGSDTLLGGADNDTLSGGEGNDLLDGGTGNDSLAGGLGSD 1434
Query: 553 HFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
+ +I + + D+ +V +
Sbjct: 1435 TYVFRRGSGQDTIYNSVSN--EANTDIQDVIVLEGLKP 1470
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 52/426 (12%), Positives = 104/426 (24%), Gaps = 16/426 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY--GIGKGTILSHNALHEIGHALG 133
S +D + + G G+ TI + + L
Sbjct: 1767 GGKGNDALSGGDGNDLLDGGVGMDSLAGGKGSDTYTFRKGYGQDTINNSAYNDTTENKLD 1826
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
++ N V D+D S + + +GY + + +
Sbjct: 1827 VIRLEGLNVSDVVIKRDSDDLLIQIKESGETLRVTSHFSASTIYGYAIDQLQFADGTILE 1886
Query: 194 IYGAPKGSLGNNI-------YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
L Y + T+ G D ++ GG
Sbjct: 1887 NAQIRAALLLGTDADDVMTGYSTDDVIAGDGGNDTLSGGSGSDRIE----GGDGKDNLSG 1942
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + G + +++ +++ G + ND + G ++ SGND G G D
Sbjct: 1943 DDGDDLLLGGSGDDSLSGGDANDTLKGGADNDSLSGGYGDDFLDGGSGNDTLYGGYGSDV 2002
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEH---KQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ + S I + + + +DV R +D + + ++
Sbjct: 2003 YVFGHGSSQDTINNSAYNDTTVNKLDVVRLEGLNQADVSLRRDSDDLVIQIRDSGDTLRV 2062
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ I D I + F + G
Sbjct: 2063 ASYFSSSAIYGYAVDQLLFADGSTLNVDQLRAAILKGTQEDDSLIAFESADFLNGLGGND 2122
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
G D L ++ L + G D +
Sbjct: 2123 TISGRGGDDVLDGGDGKDTLSGEDGNDTLFGGAGNDTLNGGYGNDSLDGGLGNDSLSGGV 2182
Query: 484 DSYLYL 489
S +Y+
Sbjct: 2183 GSDIYV 2188
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 58/507 (11%), Positives = 115/507 (22%), Gaps = 34/507 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D + + + D G T+ + +
Sbjct: 1164 STDGNDVLTGYASDDSISGGLGNDTIYGRAGNDTLSGEAGNDTLYGEDGNDLLNGGADAD 1223
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
NG + G + D + S +Y + + S D Y + + + K+
Sbjct: 1224 LLYGGNGNDTLDGGGGNDTLDGGMGSD-TYVLRKGSGQDQINNYTSDDKTAQKIDKVKLD 1282
Query: 196 GAPKGSLG------NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
G + + + +I+ G L D
Sbjct: 1283 GLNPADITVHREYNDLVIQIKSTGDSIRVNSHFNQDGDSVYAVDQLQFADSTVWDGAKLK 1342
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ N TI + + + G +GND + G ++ +G D +G G DT
Sbjct: 1343 TEVLKTTGDNDTIIGYQTADQLFGLAGNDTLSGRGGDDFLDGGAGKDTLNGEEGSDTLL- 1401
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + E ++ D L+ + + + S E
Sbjct: 1402 -GGADNDTLSGGEGNDLL--DGGTGNDSLAGG----LGSDTYVFRRGSGQDTIYNSVSNE 1454
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ V E +K E D+ +D + H+ ++
Sbjct: 1455 ANTDIQDVIVLEGLKPEDVVMRRESDDLIIQIKD------------TNDSVRVSGHFSSY 1502
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+ A +F + L D L
Sbjct: 1503 -----VAYNYAIDQVKFADGSVWDTSFIKSALLTGNAGDDNITGYETADMLKGLRGNDTL 1557
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
+ G D G L + + +
Sbjct: 1558 SGRAGDDVLDGGDGRDTLN--GEDGNDTLLGGAGNDMLSGGNGDDVMDGGSGNDTLSGGG 1615
Query: 550 GKDHFSNFGYEEGRSITFNPDLYLTSY 576
G D + +I T
Sbjct: 1616 GSDTYIFRKGSGQDTILNYAYSDATQN 1642
Score = 42.5 bits (98), Expect = 0.27, Method: Composition-based stats.
Identities = 50/345 (14%), Positives = 94/345 (27%), Gaps = 31/345 (8%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES-------VVGSSGNDVV 280
DDL+ G + + + + G + A T++++ + G+ +D +
Sbjct: 2231 DDLILQIKETGDTLRVTSHFSASAISGYAIDQLQFADGTLMDNSQIKLALLGGTEDDDTL 2290
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G ++V +GND G +G D + +Y E ++ +
Sbjct: 2291 VGYDTDDVLKGLAGNDNISGRAGADIL--DGGAGKDSLYGDEGNDVLRGEADDDT----- 2343
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDIT 398
+L+ A + L G D F S D T
Sbjct: 2344 ------------LNGGIGDDLLDGGAGNDSLAGGSGSDTYVFRKGSGQDTINNSVYNDTT 2391
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+ + + R + E I+ + F+D
Sbjct: 2392 ANKLDVIKLDGLNLSDISLRRESDDLIIEIKETGEILRVTQHFNASLISGYAIDQLQFSD 2451
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
L G G + F N S R G
Sbjct: 2452 GSFLTTDQIRTALLIGTV-GDDIIFGYDSADVLKGASGNDTLSGRAGNDALLGGEGKDML 2510
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDL--VQAGKDHFSNFGYEE 561
D L+ A ++ L + + AG+D +N+ Y +
Sbjct: 2511 NGEDGNDILDGGAGNDTLNGGYGSDTYVFRRGAGQDTVNNYAYND 2555
>gi|99081675|ref|YP_613829.1| RTX toxins and related Ca2+-binding proteins-like [Ruegeria sp.
TM1040]
gi|99037955|gb|ABF64567.1| RTX toxins and related Ca2+-binding proteins-like protein [Ruegeria
sp. TM1040]
Length = 867
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 59/201 (29%), Gaps = 11/201 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ +GG+D + GG + I + G N +
Sbjct: 465 GGADLIVGRGGADQLIGNGGNDTIK----GGGGHDILSGGAGKDVLKGNGGNDALNGGGG 520
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ ++G GND + G +V GNDV DG G D S I + +V
Sbjct: 521 RDKLIGGRGNDTMSGGDVRDVLKGGGGNDVLDGGEGRDKLI--GGSGNDTITTGFDGDVV 578
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFESMKHF 386
+ ++ E D+ + IL+ +A D V
Sbjct: 579 RAGSGIDTIIIAGPE----GDRDLRIRGTMDDGDILDLSALNIDSYFVEDSFAGGGASSV 634
Query: 387 YEFGLSEGRDITFDSYLYLGS 407
G G DI FD
Sbjct: 635 RTRGDGLGYDIDFDGDGIGDR 655
Score = 37.1 bits (84), Expect = 10.0, Method: Composition-based stats.
Identities = 18/163 (11%), Positives = 38/163 (23%), Gaps = 10/163 (6%)
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCID-SVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + + L E L ++ + + L+ + ++ G D
Sbjct: 423 DSNFIGSADWRVSLGSYETLELGNRSDERLTGTAGENFLDGRGGADLIVGRGGADQLIGN 482
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G DI G+ D+ G + G + +
Sbjct: 483 GGNDTIKGGGGHDIL-----SGGAGKDVLKGNGGNDALN----GGGGRDKLIGGRGNDTM 533
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ L + G+D + FD
Sbjct: 534 SGGDVRDVLKGGGGNDVLDGGEGRDKLIGGSGNDTITTGFDGD 576
>gi|163851641|ref|YP_001639684.1| glycosyl transferase family protein [Methylobacterium extorquens
PA1]
gi|163663246|gb|ABY30613.1| glycosyl transferase family 2 [Methylobacterium extorquens PA1]
Length = 1035
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/247 (18%), Positives = 70/247 (28%), Gaps = 56/247 (22%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD Y +Y D+ G RHY+ HG EGR+P A F L Y H A
Sbjct: 33 PFFDPAFYRSAYPDVAAGGGD----PLRHYLDHGWLEGRDPSAVFSTLFYADRHF-ADRA 87
Query: 456 FADA-----PDLVQVGKDHFSNFGCEEGRF------VTFDSYLYLGSYDDLRNVFGSDRG 504
+ + G + FD+ Y R
Sbjct: 88 PINPLLHYAGLSPTERLRVATQPGSDFPALQAGVVEPYFDAPYYA------RLAGLEGGE 141
Query: 505 AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE--- 560
HY+T G + G +P+ F Y+ H + +P A
Sbjct: 142 DPLAHYLTKGWRRGLDPNDAFSGDAYLQRHAHMRR-LGVSPLYHFAATRRLQASEAAAPP 200
Query: 561 ------------------------EGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
E + F+ + YL + D+ +H++
Sbjct: 201 ARRAKPQAALLPADPAEASDAQIYETVAAAFDREHYLDTNPDIRR----SGIDPVRHFLD 256
Query: 597 HGMKEGR 603
G +E R
Sbjct: 257 FGAREDR 263
Score = 62.9 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 45/161 (27%), Gaps = 35/161 (21%)
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 537
FD Y +Y D+ G RHY+ HG EGR+P A F L Y H
Sbjct: 31 AAPFFDPAFYRSAYPDVAAGGGD----PLRHYLDHGWLEGRDPSAVFSTLFYADRH--FA 84
Query: 538 NAFADAPDLVQAGKDHF---------------SNFGYEEGRSITFNPDLYLTSYDDLWNV 582
+ P L AG G E F+ Y
Sbjct: 85 DRAPINPLLHYAGLSPTERLRVATQPGSDFPALQAGVVE---PYFDAPYYA------RLA 135
Query: 583 FGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
HY+T G + G + S ++
Sbjct: 136 GLEGGEDPLAHYLTKGWRRG----LDPNDAFSGDAYLQRHA 172
>gi|149203022|ref|ZP_01879993.1| Large exoprotein [Roseovarius sp. TM1035]
gi|149143568|gb|EDM31604.1| Large exoprotein [Roseovarius sp. TM1035]
Length = 5082
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/213 (12%), Positives = 54/213 (25%), Gaps = 8/213 (3%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWS 251
G S I GDD + +L G N +
Sbjct: 4772 VNDVDEGPVSTNENDTLIGSDGDDLIGGLDGDDSISGGLGSDSLFGEAGNDTLSGGDGND 4831
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + + +S+ G GND + G N+ G+D+ G +G D
Sbjct: 4832 TVAGGDGDDVVNGDAGNDSLGGGLGNDTLNGGDGNDTMGGGFGDDLLSGGTGAD--VVAG 4889
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + + + + +++ + +D
Sbjct: 4890 GAGNDTLDGGDGNDSISGSFGNDVINGGVGNDQIGGGAGRDTIDGGAGNDQIGGGEGDDD 4949
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ G D G D
Sbjct: 4950 ISGGAGNDFLAGGGRNDVIDGGTGNDTINGGAG 4982
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 81/266 (30%), Gaps = 9/266 (3%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + N P + I D D+ G +I + G
Sbjct: 4761 TPDGTASLSLTVNDVDEGPVSTNENDTLIGSDGDDLIGGLDGDDSISGGLGSDSLFGEAG 4820
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+G V G D D + + + ++ G +
Sbjct: 4821 NDTLSGGDGNDTVAGGDGDDVVNGDAGNDSLGGGLGNDTLNGGDGNDTMGGGFGDDLLSG 4880
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
GA + G +I S G+D+++ GGV N +I
Sbjct: 4881 GTGADVVAGG----AGNDTLDGGDGNDSISGSFGNDVIN----GGVGNDQIGGGAGRDTI 4932
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N I + + G +GND + G N+V +GND +G +G D A +
Sbjct: 4933 DGGAGNDQIGGGEGDDDISGGAGNDFLAGGGRNDVIDGGTGNDTINGGAGNDIMTGGADA 4992
Query: 314 YLYKIYRF-ENAIIVYDANEHKQDFL 338
++ F + + V E D L
Sbjct: 4993 DIFVFSAFVDGELDVITDFEDGTDRL 5018
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 47/361 (13%), Positives = 90/361 (24%), Gaps = 80/361 (22%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
LD + + +N S ++++ + V E V ++ ND +IG+ +++
Sbjct: 4739 LDFETKAQLDVSVTVNDASVGGTPDGTASLSLTVNDVDEGPVSTNENDTLIGSDGDDLIG 4798
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
G+D G G D+ F E D LS D
Sbjct: 4799 GLDGDDSISGGLGSDSLF----------------------GEAGNDTLSG------GDGN 4830
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
++ A + L +G D G G D+ G+ D
Sbjct: 4831 DTVAGGDGDDVVNGDAGNDSLGGGLGNDTLNGGDGNDTMGGGFGDDLL-----SGGTGAD 4885
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ + L+ ++ + +F + VG D
Sbjct: 4886 VVAGGAGN----------------------DTLDGGDGNDSISGSFGNDVINGGVGNDQI 4923
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
+ + G D G+ L
Sbjct: 4924 GGGAGRDTIDGGAGNDQIGGGEGDDDISGGA---------------------GNDFLAGG 4962
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
++ + + AG D G + F+ ++ D+ F
Sbjct: 4963 GRNDVIDGGTGNDTINGGAGND--IMTGGADADIFVFSA--FVDGELDVITDFEDGTDRL 5018
Query: 591 A 591
Sbjct: 5019 L 5019
>gi|332265536|ref|XP_003281775.1| PREDICTED: stromelysin-3 isoform 1 [Nomascus leucogenys]
Length = 493
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 62/199 (31%), Gaps = 60/199 (30%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEET 73
L W + Y+ + QE R AL WS V LTF E
Sbjct: 100 LSGGRWEKTDLTYRILRFPWQLV-----------QEQVRQTMAEALKVWSDVTPLTFTEV 148
Query: 74 SIH-SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
+DI + + P+ +++FD + W G +G
Sbjct: 149 HEGRADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGDDQG 206
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T L A HE GH LGL H + ++MS F +F
Sbjct: 207 TDLLQVAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTF 239
Query: 178 GYCATPMVSDIVAVQKIYG 196
Y + D +Q +YG
Sbjct: 240 RYPLSLSPDDHRGIQHLYG 258
>gi|298370417|ref|ZP_06981733.1| type I secretion target repeat protein [Neisseria sp. oral taxon
014 str. F0314]
gi|298281877|gb|EFI23366.1| type I secretion target repeat protein [Neisseria sp. oral taxon
014 str. F0314]
Length = 494
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 53/297 (17%), Positives = 89/297 (29%), Gaps = 56/297 (18%)
Query: 112 YGIGKGTILSHNALHEIGHALG--LMHPGSYNGGYPVYGVDNDYENDSFLTS--VMSYFM 167
+G+G + + HE+GHALG Y Y Y + + M +
Sbjct: 73 FGLGSQYVTARILAHEVGHALGRNQAKSADYYPTAKSYAQARGYGEAEAIYNEARMVAYE 132
Query: 168 PQDSMMDASFGYCATP----------MVSDIVAVQKIYGAPKGSLG--------NNIYKI 209
Q + S V D++A + +YG + G N+I
Sbjct: 133 EQRNGRAYSTHISGGLYPQVKGKSYEQVKDLLARENMYGMYPSTNGSVRLSYYENDILFF 192
Query: 210 EVQQKD---------------------SPFIQTIYDSGGDD-----LLDLTLIGGVKNYI 243
++ T DS G++ D + K
Sbjct: 193 MHRRTAFEKDFAEAGLRQSDMVGFVKHMANYDTFGDSRGNNVNANGAFDRQSLLQGKPTT 252
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
LN + S+ G N + + ++G SGND + G N++ ++G D G G
Sbjct: 253 RLNGGA--SMYGDAGNDVMTGTKSNDRMLGGSGNDTLKGGDGNDLLAGNAGKDRLYGGRG 310
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
DT Y I + V+ + V L D+ +
Sbjct: 311 YDT---YRADRYDTIRDEDGKGEVFL---DGRRLRGGVRDLSEHDRTVFRDGNTVYD 361
Score = 40.9 bits (94), Expect = 0.62, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 26/106 (24%)
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D + Y + V + L + + ++
Sbjct: 212 DMVGFVKHMANYDTFGDSRGNNVNANGAFDRQSLLQGKPTTRLNGGASMYGDAGNDVMTG 271
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
T S + ++ G D + + G+D + Y D
Sbjct: 272 TKSNDRMLGGSGNDTLKGGDGNDLLAGNAGKDRLYGGRGYDTYRAD 317
>gi|260577429|ref|ZP_05845393.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
gi|259020352|gb|EEW23684.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
Length = 306
Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/237 (14%), Positives = 70/237 (29%), Gaps = 4/237 (1%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ ++ +S++G GND ++G + N++ G+D F G +G D +
Sbjct: 1 DGADSLLGDAGNDSLLGGLGNDFLLGGAGNDILVGGLGDDSFYGGAGRDLAQFLGSIS-- 58
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
H D L +E + V + L A + ++ G
Sbjct: 59 --VTVNLGYTTKQNTGHGLDCLIQIENVVSGAGNDLLVGNWFDNTLNAGAGNDSILGEAG 116
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D+ + + G+D L + S G R
Sbjct: 117 NDILQGGEGDDRLFGGVGQDQLIGDAGDDILNGGLGDDSMSGGVGLDTLTGGDGNDFLRG 176
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+ L ++ L+ G+D + FD+ ++ S+
Sbjct: 177 GEDNDILAGDLGNDWLLGEAGRDSISGGDGRDTLDGELGNDTLTGGFDADCFVFSFG 233
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/217 (14%), Positives = 58/217 (26%), Gaps = 17/217 (7%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ GDD + ++ + + + ++N +I
Sbjct: 20 GNDFLLGGAGNDILVGGLGDDSFYGGAGRDLAQFLGSISVTVNLGYTTKQNTGHGLDCLI 79
Query: 269 --ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
E+VV +GND+++GN +N +GND G +G D +++
Sbjct: 80 QIENVVSGAGNDLLVGNWFDNTLNAGAGNDSILGEAGNDIL--QGGEGDDRLFGGVGQDQ 137
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ L L + L D+
Sbjct: 138 LIGDAGDD--------ILNGGLGDDSMSGGVGLDTLTGGDGNDFLRGGEDNDILAGDLGN 189
Query: 387 YEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSD 418
GRD D+ D L F +D
Sbjct: 190 DWLLGEAGRDSISGGDGRDTLDGELGNDTLTGGFDAD 226
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 47/164 (28%), Gaps = 10/164 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + GDD+L D ++ GGV + + G E N +A
Sbjct: 125 GDDRLFGGVGQDQLIGDAGDDILNGGLGDDSMSGGVGLDTLTGGDGNDFLRGGEDNDILA 184
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ ++G +G D + G + GND G D F + + + F
Sbjct: 185 GDLGNDWLLGEAGRDSISGGDGRDTLDGELGNDTLTGGFDADCFVFSFGADRITDFGFTQ 244
Query: 324 AIIVYDANEH-----KQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ + +E + L
Sbjct: 245 NDQIILDSTVLSSVRGMTTQQVIELYALDRGADVVFEFGGGNSL 288
Score = 40.2 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 26/205 (12%), Positives = 52/205 (25%), Gaps = 6/205 (2%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
D + L + L+ G D+ F GRD+ +
Sbjct: 1 DGADSLLGDAGNDSLLGGLGNDFLLGGAGNDILVGGLGDDSFYGGAGRDL---AQFLGSI 57
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
+ + + + ++ + L L + L + G
Sbjct: 58 SVTVNLGYTTKQNTGHGLDCLIQIENVVSGAGNDLLVGNWFDNTLNAGAGNDSILGEAGN 117
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
D ++ F +G D G + + G+ D L
Sbjct: 118 DILQGGEGDDRLFGGVGQDQLIGDAGDDILNGGLGDDSMS---GGVGLDTLTGGDGNDFL 174
Query: 528 EYIASHEDLINAFADAPDLVQAGKD 552
++ L + L +AG+D
Sbjct: 175 RGGEDNDILAGDLGNDWLLGEAGRD 199
>gi|116669804|ref|YP_830737.1| heme peroxidase [Arthrobacter sp. FB24]
gi|116609913|gb|ABK02637.1| Animal heme peroxidase [Arthrobacter sp. FB24]
Length = 1625
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/305 (13%), Positives = 79/305 (25%), Gaps = 23/305 (7%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
D G + + + I + G + I + ++V+G GND +
Sbjct: 908 VDRPGLNAQSTFNGTALGDRI-WGGIDNDTFWGNDGQDIIEGNDGADTVLGGDGNDRITD 966
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFY----------------YAPSYLYKIYRFENAII 326
+ ++V +GND D GLD +A + +
Sbjct: 967 SHGDDVLKGGNGNDAIDAGPGLDIIMSGDGDDFSNGGLNGNETFAGEGNDLVLAGDGPDT 1026
Query: 327 VYDANEHKQDFLSDVERLRFADQCI---DSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
V+ + L D D +N +L + +D G DV +
Sbjct: 1027 VFGGGGDDWQEGGNSNDLLQGDSGAPFFDDINAPGHDVLTGGSGEDDYDAEGGDDVMVAG 1086
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA---F 440
G D + + D+R + A ++ G + D
Sbjct: 1087 PGIERNHGVFGFDWVTHARSVEPADSDMRQIIVDGPNALKDRFLLVEALSGWDKDDVLRG 1146
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
+ ++ G TF + + ++G
Sbjct: 1147 DDEVPSVPNTEVNVEGLSNELDAAGIARISGLAGLLPAGATTFGAGNIIIGGSGSDQIWG 1206
Query: 501 SDRGA 505
+
Sbjct: 1207 NGADD 1211
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 55/244 (22%), Gaps = 53/244 (21%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
I + G T + + + G ND GN ++ + G D
Sbjct: 896 SDGTIRYRVSNTVDRPGLNAQSTFNGTALGDRIWGGIDNDTFWGNDGQDIIEGNDGADTV 955
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G G D S+ + + N DA ++
Sbjct: 956 LGGDGNDRI---TDSHGDDVLKGGNGNDAIDAGP----------------GLDIIMSGDG 996
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ + G D+ + G D
Sbjct: 997 DDFSNGGLNGNETFAGEGNDLVLAGDGPDTVFGGGGDD---------------------- 1034
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+EG N + + A D INA G+D + G ++
Sbjct: 1035 ------------WQEGGNSNDLLQGDSGAPFFDDINAPGHDVLTGGSGEDDYDAEGGDDV 1082
Query: 479 RFVT 482
Sbjct: 1083 MVAG 1086
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 61/431 (14%), Positives = 109/431 (25%), Gaps = 46/431 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
F N S DV G G + HA +
Sbjct: 1048 DSGAPFFDDINAPGHDVLTGGSGEDDYDAEGGDDVMVAGPGIERNHGVFGFDWVTHARSV 1107
Query: 135 MHPGSYNGGYPVYGVDN--------DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
S V G + + + V+ S+ +
Sbjct: 1108 EPADSDMRQIIVDGPNALKDRFLLVEALSGWDKDDVLRGDDEVPSVPNTEVNVEGLSNEL 1167
Query: 187 DIVAVQKIYG-APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
D + +I G A G + I+ +G DD++D V+ +
Sbjct: 1168 DAAGIARISGLAGLLPAGATTFGAGNIIIGGSGSDQIWGNGADDIIDGDKWLNVRLSVLD 1227
Query: 246 NTESW---SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
++ E I ++ GN ++ + G +
Sbjct: 1228 GPGGSEIRTATSLTELQADIMAGSID------PGNVEIVREILASP-----------GEA 1270
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVY---DANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+DT + Y+I V D +++VE+LRF DQ ++ V +
Sbjct: 1271 DVDTAVFSGARNEYQISTVGGVTTVAHTGGTGADGTDRITNVEQLRFTDQTVNLVPAVIQ 1330
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+ IG V + F G + + + +
Sbjct: 1331 APAAPL---------IGTAVAGNTSATVAFAAPAGGFPADSFSIVVRTGTTVVRTIDGVP 1381
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
G+A H G+ G + A L A + V +
Sbjct: 1382 GSATSH-QVTGLSNGTAYNFQVRAVNSAGESPLSAA----SNEVTPRVPAYVPPAVSPFA 1436
Query: 480 FVTFDSYLYLG 490
V+ + YL
Sbjct: 1437 DVSTNQLYYLE 1447
>gi|119596628|gb|EAW76222.1| matrix metallopeptidase 24 (membrane-inserted) [Homo sapiens]
Length = 532
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 45 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 97
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 98 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 155
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 156 ANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHN 198
>gi|29126959|gb|AAH47614.1| MMP24 protein [Homo sapiens]
Length = 626
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 139 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 191
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 192 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 249
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 250 ANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHN 292
>gi|5729929|ref|NP_006681.1| matrix metalloproteinase-24 preproprotein [Homo sapiens]
gi|332858203|ref|XP_003316927.1| PREDICTED: matrix metalloproteinase-24 [Pan troglodytes]
gi|12585280|sp|Q9Y5R2|MMP24_HUMAN RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
Full=Membrane-type matrix metalloproteinase 5;
Short=MT-MMP 5; Short=MTMMP5; AltName:
Full=Membrane-type-5 matrix metalloproteinase;
Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
Full=Processed matrix metalloproteinase-24; Flags:
Precursor
gi|5381386|gb|AAD42962.1|AF131284_1 membrane type 5 matrix metalloproteinase [Homo sapiens]
gi|5689367|dbj|BAA82967.1| membrane-type-5 matrix metalloproteinase [Homo sapiens]
gi|220675561|emb|CAX12722.1| matrix metallopeptidase 24 (membrane-inserted) [Homo sapiens]
gi|225000844|gb|AAI72450.1| Matrix metallopeptidase 24 (membrane-inserted) [synthetic
construct]
Length = 645
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 52/163 (31%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 158 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 210
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + +FD + W G
Sbjct: 211 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 268
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 269 ANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHN 311
>gi|109094826|ref|XP_001083910.1| PREDICTED: stromelysin-3 [Macaca mulatta]
Length = 488
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 63/199 (31%), Gaps = 60/199 (30%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEET 73
L W + Y+ + QE R AL WS V LTF E
Sbjct: 100 LSGGRWEKTDLTYRILRFPWQLV-----------QEQVRQTMAEALKVWSDVTPLTFTEV 148
Query: 74 -SIHSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
H+DI + + P+ +++FD + W G +G
Sbjct: 149 HEGHADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGDDQG 206
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T L A HE GH LGL H + ++MS F +F
Sbjct: 207 TDLLQVAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTF 239
Query: 178 GYCATPMVSDIVAVQKIYG 196
Y + D +Q +YG
Sbjct: 240 RYPLSLSPDDRRGIQHLYG 258
>gi|18158443|ref|NP_542954.1| matrix metalloproteinase-16 [Rattus norvegicus]
gi|2424973|dbj|BAA22223.1| MT3-MMP-del [Rattus sp.]
Length = 547
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 48/161 (29%), Gaps = 30/161 (18%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T +P + R A W V LTFEE
Sbjct: 122 LTGQKWQHKHITYSIKNVTPKVG-------DPETRRAIRRAFDVWQNVTPLTFEEVPYSE 174
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDRSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN 275
>gi|297708400|ref|XP_002830961.1| PREDICTED: stromelysin-3-like, partial [Pongo abelii]
Length = 452
Score = 75.2 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 62/196 (31%), Gaps = 54/196 (27%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETSIH 76
L W + Y+ L Q++ AL WS V LTF E
Sbjct: 64 LSGGRWEKTDLTYRILRFPWQ--------LVQEQVQQMMAEALKVWSDVTPLTFTEVHEG 115
Query: 77 -SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
+DI + + P+ +++FD + W G +GT L
Sbjct: 116 RADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGDDQGTDL 173
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
A HE GH LGL H + ++MS F +F Y
Sbjct: 174 LQVAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTFRYP 206
Query: 181 ATPMVSDIVAVQKIYG 196
+ D +Q +YG
Sbjct: 207 LSLSPDDRRGIQHLYG 222
>gi|146278458|ref|YP_001168617.1| glycoside hydrolase family protein [Rhodobacter sphaeroides ATCC
17025]
gi|145556699|gb|ABP71312.1| glycoside hydrolase, family 16 [Rhodobacter sphaeroides ATCC 17025]
Length = 467
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 58/205 (28%), Gaps = 7/205 (3%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ TI + V G+ D++ G N+ G D G +G D + +
Sbjct: 221 LPSDSTIFGNRSANLVQGTGAADLLYGFGGNDTLAGGGGADRMYGGAGHDIYLVDNAA-- 278
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
++ + + VERL I+ + Q +++ + L+
Sbjct: 279 DRVIERAGEGTDTVRSSVSYQLEAHVERLVLTGSAAINGIGNGQANLMIGNGAANRLVGG 338
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D E G D + D L G+DR T G
Sbjct: 339 GGNDRLEGRNGHDRLEAGAGHDTL----IGGAGNDRLLGGTGADRLHGGAGNDTLTGGAG 394
Query: 435 RNPDAFKALEYIASHEDLINAFADA 459
+ F D + +
Sbjct: 395 HDTFVFARGHGRDVITDFVPRGGED 419
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 36/96 (37%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G + + ++++G +GND ++G + + +GND G +G D
Sbjct: 337 GGGGNDRLEGRNGHDRLEAGAGHDTLIGGAGNDRLLGGTGADRLHGGAGNDTLTGGAGHD 396
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
TF + I F H D ++V
Sbjct: 397 TFVFARGHGRDVITDFVPRGGEDRLEIHGYDRAAEV 432
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/243 (12%), Positives = 56/243 (23%), Gaps = 46/243 (18%)
Query: 197 APKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ +Y +Y G D + L + + +
Sbjct: 236 VQGTGAADLLYGFGGNDTLAGGGGADRMYGGAGHD-IYLVDNAADRVIERAGEGTDTVRS 294
Query: 255 GYEKNMT------IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ + + + +G+ +++IGN A N GND +G +G D
Sbjct: 295 SVSYQLEAHVERLVLTGSAAINGIGNGQANLMIGNGAANRLVGGGGNDRLEGRNGHDRL- 353
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
D L + L
Sbjct: 354 ---------------------EAGAGHDTL---------------IGGAGNDRLLGGTGA 377
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L G D F + G + +D + G DR A R
Sbjct: 378 DRLHGGAGNDTLTGGAGHDTFVFARGHGRDVITDFVPRGGEDRLEIHGYDRAAEVRQVGA 437
Query: 429 HGV 431
+
Sbjct: 438 DTL 440
Score = 38.2 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 35/209 (16%), Positives = 56/209 (26%), Gaps = 15/209 (7%)
Query: 341 VERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
VE +R +D I + ++++ T + + L G D G DI
Sbjct: 216 VENIRLPSDSTI--FGNRSANLVQGTGAADLLYGFGGNDTLAGGGGADRMYGGAGHDIYL 273
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
R G+D ++ Y E A+ I + A
Sbjct: 274 VDNA--ADRVIERAGEGTDTVRSSVSYQLEAHVERLVLTGSAAINGIGNG----QANLMI 327
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
+ EGR D +D L G+D R G
Sbjct: 328 GNGAANRLVGGGGNDRLEGRN-GHDRLEAGAGHDTLIGGAGND-----RLLGGTGADRLH 381
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQ 548
L A H+ + A D++
Sbjct: 382 GGAGNDTLTGGAGHDTFVFARGHGRDVIT 410
>gi|193070431|ref|ZP_03051372.1| RTX C- domain family [Escherichia coli E110019]
gi|192956250|gb|EDV86712.1| RTX C- domain family [Escherichia coli E110019]
Length = 1024
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 57/199 (28%), Gaps = 34/199 (17%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + N + +++ G +G+D + G N+ +GN
Sbjct: 732 FGSKFTDIFHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGN 791
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D S +V L
Sbjct: 792 NYLNGGDGDDELQVQGNS-----------------------LAKNV--LSGGKGNDKLYG 826
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHF-----YEFGLSEGR----DITFDSYLYLG 406
+ +L+ + L G D++ + + + G E + DI F +
Sbjct: 827 SEGADLLDGGEGNDLLKGGYGNDIYRYLSGYGHHIIDDDGGKEDKLSLADIDFRDVAFKR 886
Query: 407 SYDDLRNVFGSDRGAAARH 425
+DL + H
Sbjct: 887 EGNDLIMYKAEGNVLSIGH 905
Score = 40.2 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 37/244 (15%), Positives = 68/244 (27%), Gaps = 31/244 (12%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----ENAIIVY------- 328
++ F S+G+ G D +Y Y V
Sbjct: 615 HLGDGDDKVFLSAGSANIYAGKGHDVVYYDKTDTGYLTIDGTKATEAGNYTVTRVLGGDV 674
Query: 329 -----DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
A E + E+ ++ +N K + + S E+LI D F
Sbjct: 675 KVLQEVAKEQEVSVGKRTEKTQYRSYEFTHINGKNLTETDNLYSVEELIGTTRADKFFGS 734
Query: 384 KHFYEFGLSEGRDI----TFDSYLYLGSYDDLRNV-------FGSDRGAAARHYITHGVK 432
K F ++G D+ + LY +D + +G D +
Sbjct: 735 KFTDIFHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGNNYL 794
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV---TFDSYLYL 489
G + D ++ + +++++ L + G D Y YL
Sbjct: 795 NGGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYL 854
Query: 490 GSYD 493
Y
Sbjct: 855 SGYG 858
>gi|158337330|ref|YP_001518505.1| type I secretion target domain/SCP-like extracellular
domain-containing protein [Acaryochloris marina
MBIC11017]
gi|158307571|gb|ABW29188.1| protein with type I secretion target domain and SCP-like
extracellular domain [Acaryochloris marina MBIC11017]
Length = 455
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 68/271 (25%), Gaps = 7/271 (2%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A N + I G+D + G SI G
Sbjct: 159 ANSPPSTNTATAGNDLLNGTNKPDKIAGLAGNDTIK----GANGADTLSGGNGSDSIYGQ 214
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N + + + G SGND++ G S N+ +G D G G D S
Sbjct: 215 AGNDLLNGGEGNDRLKGESGNDLIRGGSGNDYLEGGAGKDRLFGEIGKDRLR--GGSNRD 272
Query: 317 KIYRFENAIIVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + +Y ++ + +RL V K + + L
Sbjct: 273 TLDGAQGNDSLYGDGDNDRLLGRDGNDRLYGGSGRDKLVGHKGNDTMFGGLGNDSLYGGN 332
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G+DV + S+ + L + F D + EG
Sbjct: 333 GRDVLTGIATTSSTSKSQIDRLKGGPGGDLYILGNQSQSFYDDGRNNTLGKGDYAHIEGF 392
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ S + +
Sbjct: 393 KVAEGDRILLHGSASEYSLGSSPTGTPSGQA 423
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 48/197 (24%), Gaps = 19/197 (9%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
++GND++ G + + +GND G++G DT
Sbjct: 167 TATAGNDLLNGTNKPDKIAGLAGNDTIKGANGADTL-------------SGGNGSDSIYG 213
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ D L+ E ++ + + L G+D
Sbjct: 214 QAGNDLLNGGE------GNDRLKGESGNDLIRGGSGNDYLEGGAGKDRLFGEIGKDRLRG 267
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
RD + Y D N R R Y G + + ++
Sbjct: 268 GSNRDTLDGAQGNDSLYGDGDNDRLLGRDGNDRLYGGSGRDKLVGHKGNDTMFGGLGNDS 327
Query: 452 LINAFADAPDLVQVGKD 468
L
Sbjct: 328 LYGGNGRDVLTGIATTS 344
>gi|119492566|ref|ZP_01623784.1| alkaline phosphatase [Lyngbya sp. PCC 8106]
gi|119453035|gb|EAW34205.1| alkaline phosphatase [Lyngbya sp. PCC 8106]
Length = 2080
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 72/230 (31%), Gaps = 14/230 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ + G + L T+ I G++ + +A +++ G S +D+++ N+
Sbjct: 1849 NTTTNIIEGDADDNELLGTDEGEDIFGFQGSDLLAALNGDDNIYGGSEDDLILAGQGNDN 1908
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ +GND G G T S + I I++ + + + FA
Sbjct: 1909 CYGDAGNDSIFGGIGG-TLPGDDSSDIDYIEGGNGNDIIFGNTGSDTILGGNGDDIIFAG 1967
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ ++ + + G D + F EG + Y
Sbjct: 1968 K--------GDDLVSGGEGNDFITGDDGNDTLDGGNGRDRFLFVEGSGTDL-----IADY 2014
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+D +++F +G + E +A+ +
Sbjct: 2015 EDGQDLFVLGQGLTFDQLTISQISGLTQIQVTSTDEVLATLPGIAVGDIG 2064
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 59/173 (34%), Gaps = 6/173 (3%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
DI Q + +NIY + Y G+D + IGG D
Sbjct: 1872 DIFGFQGSDLLAALNGDDNIYGGSEDDLILAGQGNDNCYGDAGNDSI-FGGIGGTLPGDD 1930
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ I G N I +T ++++G +G+D++ +++ GND G G
Sbjct: 1931 --SSDIDYIEGGNGNDIIFGNTGSDTILGGNGDDIIFAGKGDDLVSGGEGNDFITGDDGN 1988
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
DT + ++ D E QD + L F I ++
Sbjct: 1989 DTLDGGNGRDRFLFVEGSGTDLIADY-EDGQDLFVLGQGLTFDQLTISQISGL 2040
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/227 (11%), Positives = 60/227 (26%), Gaps = 11/227 (4%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I ++G+ + + G +++ +G+D G S D A Y
Sbjct: 1855 IEGDADDNELLGTDEGEDIFGFQGSDLLAALNGDDNIYGGSEDDLIL--AGQGNDNCYGD 1912
Query: 322 ENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
++ D SD++ + + + + + G D+
Sbjct: 1913 AGNDSIFGGIGGTLPGDDSSDIDYIEGGNGNDIIFGNTGSDTILGGNGDDIIFAGKGDDL 1972
Query: 380 FESMKHFYEFGLSEGRDITFDSY------LYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+ +G D GS DL + + +
Sbjct: 1973 VSGGEGNDFITGDDGNDTLDGGNGRDRFLFVEGSGTDLIADYEDGQDLFVLGQGL-TFDQ 2031
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ + D + A + +G++ F+ F E
Sbjct: 2032 LTISQISGLTQIQVTSTDEVLATLPGIAVGDIGEEDFTLFEPIETPL 2078
>gi|296236895|ref|XP_002807973.1| PREDICTED: LOW QUALITY PROTEIN: stromelysin-3-like [Callithrix
jacchus]
Length = 591
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 62/199 (31%), Gaps = 60/199 (30%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEET 73
L +W + Y+ + QE R AL WS V LTF E
Sbjct: 203 LSGGHWEKTDLTYRILRFPWQLV-----------QEQVRQTMAEALRVWSDVTPLTFTEV 251
Query: 74 -SIHSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
H+DI + + P+ +++FD + W G +G
Sbjct: 252 HEGHADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGDDQG 309
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T L A HE GH LGL H +MS F +F
Sbjct: 310 TDLLQVAAHEFGHVLGLQHTKEAKA-------------------LMSAF--------YTF 342
Query: 178 GYCATPMVSDIVAVQKIYG 196
Y + D +Q +YG
Sbjct: 343 RYPLSLSPDDRRGIQHLYG 361
>gi|77457690|ref|YP_347195.1| VCBS [Pseudomonas fluorescens Pf0-1]
gi|77381693|gb|ABA73206.1| putative secreted protein, hemolysin [Pseudomonas fluorescens Pf0-1]
Length = 2887
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 52/393 (13%), Positives = 113/393 (28%), Gaps = 31/393 (7%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE--- 127
+ ++ + N + + + + A + I + E
Sbjct: 2455 TNANTAANQNLANVRNAFSANAATMTAVLVVSGYLGAVTNTNANDEDRITVNLRQGETLN 2514
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ H L H + TS Y + ++ + +
Sbjct: 2515 LDHNLAAGHITMEYSINGGAYIALADGQTLTATSDGVYQIHITNITNTTGSNANAAENYQ 2574
Query: 188 IVAVQKIYGAPKGSLG-NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+ GA + + Y GG D ++T+ + +
Sbjct: 2575 LTMTLNYAGAHDITPDYHGTYTANDN------------HGGSDTANVTISYQDGHTLTGT 2622
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + G N+ I + + SGN+ + G + N++ + GND+ DG SG+DT
Sbjct: 2623 SGDDVLVAGTGDNI-INAGDGNDVLTAGSGNNELHGGAGNDLLYSGPGNDLLDGGSGIDT 2681
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
Y + + + D L+ +E L ++ +++
Sbjct: 2682 ASY--AHATAGVTVNLGLLGAQNTIGAGTDTLTGIENLVGSNFNDTLTGDNNNNVINGGL 2739
Query: 367 SYEDL---------IQVIGQDVFESMKHFYEFGLSEGR---DITFDSYLYLGSYDDLRNV 414
+ L I +G + F +G D+ D D + +
Sbjct: 2740 GNDILNGGGGDDLLIGGMGNNTLTGGPGADTFQWLKGNSGHDLVTDFTPGTDKLDLSQLL 2799
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G + +A+ H G +++ A
Sbjct: 2800 QGENGTSASLDDYLHFTVTGSGASVMTSIDVSA 2832
>gi|296445691|ref|ZP_06887645.1| glycosyl transferase group 1 [Methylosinus trichosporium OB3b]
gi|296256794|gb|EFH03867.1| glycosyl transferase group 1 [Methylosinus trichosporium OB3b]
Length = 2009
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 78/240 (32%), Gaps = 32/240 (13%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD + Y + + G +P F + Y ++
Sbjct: 758 PLFDPAWFARRYQ------RKGLVDCMIFFQKFAFECGLDPHPLFDSKWYGETYP----- 806
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
++G + G + GR+ FD Y+ +Y + H+I
Sbjct: 807 --KTFREGRIGVHDYMETGAQRGRWPNPLFDPAYYVRTYKEQIEPG----TNPLAHFIEQ 860
Query: 514 GVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG--RSITFNPD 570
G +G NP+ F + Y A + + H+ + G + G +++F+
Sbjct: 861 GSDDGLNPNPLFSSAWYRAVNPGVAAENWIP-------LAHYLHVGGKLGLDPNLSFSTK 913
Query: 571 LYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSL 630
YL DL S + A + G E + Q+K S + + + D++L
Sbjct: 914 SYLAENPDLDLAKESALAHALRK--RSGRGESTLSTETRPQWKKAPLASSERQSRRDVAL 971
>gi|295690168|ref|YP_003593861.1| peptidase M10A and M12b matrixin and adamalysin [Caulobacter segnis
ATCC 21756]
gi|295432071|gb|ADG11243.1| peptidase M10A and M12B matrixin and adamalysin [Caulobacter segnis
ATCC 21756]
Length = 556
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 73/439 (16%), Positives = 138/439 (31%), Gaps = 57/439 (12%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG-TILSHNALHEIGHALGLMHPGSYNGG 143
N G + F+ + + G L HE+GHALG + S
Sbjct: 91 NGGSADIEIFLDGDFLTKWYWIDPLDGSTKPPGMNSLVEVLAHELGHALGF-NGFSDWAT 149
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
Y + ++ + + + YF+ + ++ T +G
Sbjct: 150 YALGSYGTRFDRLIQVENGLPYFVGEQAVALYGGAVPLTAG-------------NVFHVG 196
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
N + + +T D+ + + L ++I
Sbjct: 197 NTSTPLNTDLMNGLAFRT----------DVRYLVSALDVAILRDMGTATILS-------- 238
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY-RFE 322
+ ++GS DV+ G + N+ +G+DV +G G DT Y S Y +
Sbjct: 239 -----DKLLGSPKGDVIHGGAGNDEIQGFAGDDVIEGGLGADTAIYAGASENYAWSKDAK 293
Query: 323 NAIIVYD---ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT---ASYEDLIQVIG 376
+ V D D L VE L+F+D+ + + +I DL+ +
Sbjct: 294 GSWTVRDLRTGAPEGIDTLHGVETLKFSDKTVSLASTSPLAIAAGALLRGGQSDLVADLD 353
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
V + + L+ S S L +F + + EG N
Sbjct: 354 AKVADGSR-----TLASAVATLMTSAGQTTSVATLSYLFFTGKIPGDAGMDYLVSPEGPN 408
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ + Y A + L N F + + + + F + G F++ + +
Sbjct: 409 GNNLNSAYYQAFN--LENRFINFAVNLGGVGEGRAQFEAKYGALSLFEATR-----EAYK 461
Query: 497 NVFGSDRGAAARHYITHGV 515
+FG+ A H + G
Sbjct: 462 AIFGAAPNDAKTHALIDGR 480
>gi|329848650|ref|ZP_08263678.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843713|gb|EGF93282.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 548
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 83/521 (15%), Positives = 148/521 (28%), Gaps = 34/521 (6%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN- 151
+ + + G G + G G + G
Sbjct: 8 NGTGNADVLFGGNAGETINAGDGDDIAFGQGGNDTVNGGQGHDSLDGGTGSDLLTGGTGN 67
Query: 152 -DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI--YGAPKGSLGNNIYK 208
+ DS V+ ++ AS Y V + + + + A LGN +
Sbjct: 68 DTFYVDSATDDVVELSGQGTDLVVASASYSLAGRVVENLTLTGSAHFDATGNGLGNTLTG 127
Query: 209 --IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-------SWSSIGGYEKN 259
T+ G+D + IG + +WS G +N
Sbjct: 128 NAGNNSLDGGGASDTLIGGAGNDTYYVQAIGDAVVELPGEGTDLVVSSLTWSLAGMLVEN 187
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+++ + + G+S + + GN+ +NV +G+D G G DT++ A
Sbjct: 188 LSL-TGSADLNGTGNSLGNSLTGNAGHNVLDGGAGSDTLTGGLGNDTYYVDAAGDSVVET 246
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+V + + VE L + ++L L G D
Sbjct: 247 AGGGTDLVIASVSYSL-AGKQVENLTLTGAAASATGNGLANVLTGNGGANMLDAGAGHDS 305
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ G D G G+D ++ Y E
Sbjct: 306 LDGGAGTDTLIGGSGNDSYLVDS--TGDVITEAAGGGADAVWSSVTYTLSVDVESLTLTG 363
Query: 440 FKALE--YIASHEDLINAFADAPDLVQVGKDHF--------SNFGCEEGRFVTFDSYLYL 489
A+ A L + +G D + EG V F + Y
Sbjct: 364 TAAINGTGNAVGNVLTGNTGNNVLSGGLGNDTYYVQNTGDAVVELGGEGTDVIFSAVTYS 423
Query: 490 GS--YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
S Y + N+ GS+ A + +T+ + D + + L L
Sbjct: 424 LSGRYAETINLTGSNNINATGNSLTNTLVGN---DGSNTINGKGGKDSLTGGLGADVFLF 480
Query: 548 QA--GKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
+A GKD ++F + SI N + + L G +
Sbjct: 481 EASNGKDTITDFSAAQNDSINVNAYTGGVANNSLVAQVGGN 521
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 40/317 (12%), Positives = 90/317 (28%), Gaps = 16/317 (5%)
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
+ ET+ I+S + + + ++ + G ++
Sbjct: 237 DAAGDSVVETAGGGTDLVIASVSYSLAGKQVENLTLTGAAASATGNGLANVLTGNGGANM 296
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
GH G + ++ ++ DA +
Sbjct: 297 LDAGAGH-----DSLDGGAGTDTLIGGSGNDSYLVDSTGDVITEAAGGGADAVWSSVTYT 351
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG------ 237
+ D+ ++ A GN + + + G+D + G
Sbjct: 352 LSVDVESLTLTGTAAINGTGNAV---GNVLTGNTGNNVLSGGLGNDTYYVQNTGDAVVEL 408
Query: 238 -GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + ++S G Y + + + I + G+S + ++GN +N G D
Sbjct: 409 GGEGTDVIFSAVTYSLSGRYAETINLTGSNNI-NATGNSLTNTLVGNDGSNTINGKGGKD 467
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G G D F + A + I F A +++ + +
Sbjct: 468 SLTGGLGADVFLFEASNGKDTITDFSAAQNDSINVNAYTGGVANNSLVAQVGGNVVITFD 527
Query: 357 KQRSILEYTASYEDLIQ 373
+I A+ D++
Sbjct: 528 ASNTITVIGATQADVLA 544
>gi|240138807|ref|YP_002963282.1| hypothetical protein MexAM1_META1p2211 [Methylobacterium extorquens
AM1]
gi|240008779|gb|ACS40005.1| hypothetical protein MexAM1_META1p2211 [Methylobacterium extorquens
AM1]
Length = 1022
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 73/246 (29%), Gaps = 54/246 (21%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIAS------- 448
FD Y +Y D+ G RHY+ HG EGR+P A F L Y
Sbjct: 20 PFFDPAFYRSAYPDVAAGGGD----PLRHYLDHGWLEGRDPSAVFSTLFYADRHFADRAL 75
Query: 449 -HEDLINAFADAPDLVQVGKDHFSNF--GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ L A + ++V +F FD+ Y R
Sbjct: 76 INPLLHYAGLSPTERLRVATQPGPDFPSLQAGVAEPYFDAPYYA------RLAGLEGGED 129
Query: 506 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE---- 560
HY+T G + G +P+ F Y+ H + +P A
Sbjct: 130 PLTHYLTKGWRRGLDPNDAFSGDAYLQRHAHMRR-LGVSPLYHFAATRRLQASEAAAPPA 188
Query: 561 -----------------------EGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
E + F+ + YL + D+ +H++
Sbjct: 189 RRAKPQAALPPADPAEASDAQIYETVAAAFDREHYLDTNPDIRR----SGIDPVRHFLDF 244
Query: 598 GMKEGR 603
G +E R
Sbjct: 245 GAREDR 250
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 45/159 (28%), Gaps = 31/159 (19%)
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASH---- 533
FD Y +Y D+ G RHY+ HG EGR+P A F L Y H
Sbjct: 18 AAPFFDPAFYRSAYPDVAAGGGD----PLRHYLDHGWLEGRDPSAVFSTLFYADRHFADR 73
Query: 534 ---EDLINAFADAPDLVQAGKDHF------SNFGYEEGRSITFNPDLYLTSYDDLWNVFG 584
L++ +P G E F+ Y
Sbjct: 74 ALINPLLHYAGLSPTERLRVATQPGPDFPSLQAGVAE---PYFDAPYYA------RLAGL 124
Query: 585 SDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
HY+T G + G + S ++
Sbjct: 125 EGGEDPLTHYLTKGWRRG----LDPNDAFSGDAYLQRHA 159
>gi|221639946|ref|YP_002526208.1| glycoside hydrolase, family 16 [Rhodobacter sphaeroides KD131]
gi|221160727|gb|ACM01707.1| Glycoside hydrolase, family 16 [Rhodobacter sphaeroides KD131]
Length = 475
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 55/210 (26%), Gaps = 8/210 (3%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ T+ + + G+SG D++ G N+ + D G +G DT+
Sbjct: 220 LPSDSTVFGKGGADDLRGTSGEDLLYGFGGNDTLRGGAAADRMIGGTGNDTYIVDH--AG 277
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
++ + + VERL I+ ++L + L
Sbjct: 278 DEVVERAGEGLDRVCASVSHQLAAHVERLVLTGTAAINGAGNGLANVLWGNGAANRLSGG 337
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
G D E G D D D L G+DR
Sbjct: 338 GGNDRLEGRDGSDVLNGGTGHDTLIGGAGHDRLAGGTGSDRLVGGSGNDRLDGGIDRDVL 397
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADA 459
G + F A D
Sbjct: 398 TGGAGADTFVFAAGYGRDVITDFRVGNGGD 427
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 2/120 (1%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ G + + + + G N + + + G +G+D +IG + ++
Sbjct: 311 TAAINGAGNGLANVLWGNGAANRLSGGGGNDRLEGRDGSDVLNGGTGHDTLIGGAGHDRL 370
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G+D G SG D + A A + +D ++D D+
Sbjct: 371 AGGTGSDRLVGGSGNDRL--DGGIDRDVLTGGAGADTFVFAAGYGRDVITDFRVGNGGDR 428
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 4/113 (3%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ ++ +G + L GG + ++ S + G + T+ + +
Sbjct: 315 NGAGNGLANVLWGNGAANRL---SGGGGNDRLEGRDGS-DVLNGGTGHDTLIGGAGHDRL 370
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G +G+D ++G S N+ DV G +G DTF + A I F
Sbjct: 371 AGGTGSDRLVGGSGNDRLDGGIDRDVLTGGAGADTFVFAAGYGRDVITDFRVG 423
Score = 37.5 bits (85), Expect = 7.2, Method: Composition-based stats.
Identities = 33/215 (15%), Positives = 46/215 (21%), Gaps = 22/215 (10%)
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
VE +R L T+ + L G D G D
Sbjct: 215 VENIRLPSDSTVFGKGGADD-LRGTSGEDLLYGFGGNDTLRGGAAADRMIGGTGNDTYI- 272
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+ G R G DR A+ + E A+ A
Sbjct: 273 -VDHAGDEVVERAGEGLDRVCASVSHQLAAHVERLVLTGTAAING--------AGNGLAN 323
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
L G + + G R D L + G G
Sbjct: 324 VLWGNGAANRLSGGGGNDRLEGRDGSDVLNGGTGHDTLIGGA-----------GHDRLAG 372
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
L + ++ L AG D F
Sbjct: 373 GTGSDRLVGGSGNDRLDGGIDRDVLTGGAGADTFV 407
>gi|163760942|ref|ZP_02168020.1| iron-regulated protein FrpC [Hoeflea phototrophica DFL-43]
gi|162281723|gb|EDQ32016.1| iron-regulated protein FrpC [Hoeflea phototrophica DFL-43]
Length = 2334
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 63/426 (14%), Positives = 113/426 (26%), Gaps = 16/426 (3%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ S ++ NG AD G G I G
Sbjct: 967 ATGSTVRVTLRGNGGDDVLTGGEGNDEINGGAGADQLFGGGGNDVFYIDADDTLIRGGAG 1026
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ ++ + D+ D++ +
Sbjct: 1027 ADTVIVDTAAGVTLDMTTSEIENAVG---NAGNDQFDATGSTVRVTLRGNGGDDVLTGGE 1083
Query: 194 IYGAPKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G G + + + I G D + + GV +
Sbjct: 1084 GNDEINGGAGADQFFGGGGDDFMYIDADDTLIRGGAGADTVIVDTAAGVTLDMTTAEIEN 1143
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ + TV ++ G+ G+DV+ G N+ +G D G G D F+
Sbjct: 1144 AVGNAGNDQFDASGSTVRVTLRGNGGDDVLTGGEGNDEINGGAGADQLFGGGGDDFFYID 1203
Query: 311 APSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCI--DSVNVKQRSILEYTAS 367
A L + E+ ++V A D +++E D+ R L
Sbjct: 1204 ADDTLIRGGAGEDTVLVDTAAGVTLDMTTAEIENAVGNAGNDHFDATGSTVRVTLRGNGG 1263
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDI-----TFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L G D+ E + G D D+ ++ G+ D V
Sbjct: 1264 NDSLTGGDGNDLVEGGDGADQLTGGGGNDTIDGGADIDTAIFSGNRSDYTIVVEGSGYRI 1323
Query: 423 ARHYITH--GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
G N + F+ + + DL+N+ L G + G G
Sbjct: 1324 TDTRSGSPDGSDLVLNVENFQFADMTVAEADLLNSAPTDLALTSSGVAEDATAGQVVGTL 1383
Query: 481 VTFDSY 486
D+
Sbjct: 1384 SATDAD 1389
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 63/470 (13%), Positives = 107/470 (22%), Gaps = 33/470 (7%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKA-----DVWRYGIGKGTILSH 122
+ + + T N A G +
Sbjct: 753 IDVTNVVDEAPTDITFTGGTVNETVASGGSIDSSYNPSGATVAVLSTTDADGGIDSFTYA 812
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
GH + + G + + + + + +++ Y +
Sbjct: 813 ITNDPSGHFEIVGNEVRVRSGQNIDYETATSHDVTIQVTDANGATYLETITINVADYEGS 872
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD--------LLDLT 234
SD G I+ GGDD L
Sbjct: 873 YTTSDAGQNITGTSEEDVLTGG---AGNDTISGGAGADQIFAGGGDDYLYVDADDTLIHG 929
Query: 235 LIGGVKNYIDLNTE----------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G +D + TV ++ G+ G+DV+ G
Sbjct: 930 GAGADTVIVDTAAGVTLDMPAAEIEHAVGNAGNDQFDATGSTVRVTLRGNGGDDVLTGGE 989
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDVER 343
N+ +G D G G D F+ A L + + +IV A D S++E
Sbjct: 990 GNDEINGGAGADQLFGGGGNDVFYIDADDTLIRGGAGADTVIVDTAAGVTLDMTTSEIEN 1049
Query: 344 LRFADQCI--DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-- 399
D+ R L + L G D +F G D +
Sbjct: 1050 AVGNAGNDQFDATGSTVRVTLRGNGGDDVLTGGEGNDEINGGAGADQFFGGGGDDFMYID 1109
Query: 400 --DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
D+ + G+ D V + G + L
Sbjct: 1110 ADDTLIRGGAGADTVIVDTAAGVTLDMTTAEIENAVGNAGNDQFDASGSTVRVTLRGNGG 1169
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
D G D + + F + DD G+
Sbjct: 1170 DDVLTGGEGNDEINGGAGADQLFGGGGDDFFYIDADDTLIRGGAGEDTVL 1219
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/245 (14%), Positives = 64/245 (26%), Gaps = 17/245 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL---------NTESWSSIGGYEKNM 260
T+ +GG D L+ N + ++ G N
Sbjct: 2033 PTNTSWETLTFTVTGTGGLDRLEFREDATNNNLYGGFFDNVTMLEIADDPDTLNGGAGND 2092
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + ++G +G+D + G + N+ SG DV DG G D ++ +
Sbjct: 2093 TIHGGAQGDLLIGGAGDDRLYGGAGNDTLRLESGADVLDGGDGHDVLDIWSSGGVTVNLA 2152
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+S +E + D L + + G D
Sbjct: 2153 TG----TVSGTGVNGTTVSGIEEVWGGDGNDILTGSSAAETLYGDNGNDTISGGAGDDNL 2208
Query: 381 ESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+ G D+ D ++ +D+ D G +
Sbjct: 2209 YGEVGEDQLSGGTGDDLLSGGAGDDTMFGEDGNDIFIYAAGDGRDDVSGGSGGGWTDAIT 2268
Query: 437 PDAFK 441
Sbjct: 2269 LQGMD 2273
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/207 (14%), Positives = 61/207 (29%), Gaps = 13/207 (6%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D++ + G + V I+ ++ G+D+L +
Sbjct: 2137 DVLDIWSSGGVTVNLATGTVSGTGVNGTTVSGIEEVWGGDGNDILTGSSAAE-------- 2188
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ G N TI+ +++ G G D + G + +++ +G+D G G D
Sbjct: 2189 -----TLYGDNGNDTISGGAGDDNLYGEVGEDQLSGGTGDDLLSGGAGDDTMFGEDGNDI 2243
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F Y A + D ++ Q + S++
Sbjct: 2244 FIYAAGDGRDDVSGGSGGGWTDAITLQGMDGAISIDGREVTGQGWEMDLDSGSSVVSQNG 2303
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSE 393
L + + +F E
Sbjct: 2304 ESLTLSNDASGRIEFADGDRIDFAGIE 2330
>gi|303288219|ref|XP_003063398.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455230|gb|EEH52534.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 895
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 9/113 (7%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN------PDLYL 573
+ +A Y+ + DL AF + A K+H+ + G E R++ + Y+
Sbjct: 213 DISDDQAKCYLHRYRDLSRAFGHN---IAAAKNHWVDHGRHEHRTLDCDYMTTEEAKCYV 269
Query: 574 TSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKA 626
Y DL FG + AA +H+ HG KEGR + Q + A
Sbjct: 270 NRYSDLLRAFGHNIGAAKRHWNKHGKKEGRDKECASHQQVKSSKAKFTKKFAA 322
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-----DAFKALEYIASHEDL 536
+ YL Y DL FG + AA H++ HG E R +A Y+ + DL
Sbjct: 216 DDQAKCYLHRYRDLSRAFGHNIAAAKNHWVDHGRHEHRTLDCDYMTTEEAKCYVNRYSDL 275
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRS 564
+ AF + A K H++ G +EGR
Sbjct: 276 LRAFGHN---IGAAKRHWNKHGKKEGRD 300
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD------SYL 487
++ +A Y+ + DL AF + K+H+ + G E R + D +
Sbjct: 211 DKDISDDQAKCYLHRYRDLSRAFG---HNIAAAKNHWVDHGRHEHRTLDCDYMTTEEAKC 267
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
Y+ Y DL FG + GAA RH+ HG KEGR+
Sbjct: 268 YVNRYSDLLRAFGHNIGAAKRHWNKHGKKEGRD 300
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 9/128 (7%)
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERL--RFADQCIDSVNVKQRSILE-YTASYEDLIQV 374
++D + Q L VE+L + + Y Y DL +
Sbjct: 173 TANTNLGGKIHDRTDFVQKALQKVEKLHHALEGSLANIDKDISDDQAKCYLHRYRDLSRA 232
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFD------SYLYLGSYDDLRNVFGSDRGAAARHYIT 428
G ++ + H+ + G E R + D + Y+ Y DL FG + GAA RH+
Sbjct: 233 FGHNIAAAKNHWVDHGRHEHRTLDCDYMTTEEAKCYVNRYSDLLRAFGHNIGAAKRHWNK 292
Query: 429 HGVKEGRN 436
HG KEGR+
Sbjct: 293 HGKKEGRD 300
>gi|224612960|emb|CAQ77251.1| HlyA protein [Escherichia coli]
gi|323943998|gb|EGB40082.1| RTX domain-containing protein [Escherichia coli H120]
Length = 1024
Score = 74.8 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 57/199 (28%), Gaps = 34/199 (17%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + N + +++ G +G+D + G N+ +GN
Sbjct: 732 FGSKFTDIFHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGN 791
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D S +V L
Sbjct: 792 NYLNGGDGDDELQVQGNS-----------------------LAKNV--LSGGKGNDKLYG 826
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHF-----YEFGLSEGR----DITFDSYLYLG 406
+ +L+ + L G D++ + + + G E + DI F +
Sbjct: 827 SEGADLLDGGEGNDLLKGGYGNDIYRYLSGYGHHIIDDDGGKEDKLSLADIDFRDVAFKR 886
Query: 407 SYDDLRNVFGSDRGAAARH 425
+DL + H
Sbjct: 887 EGNDLIMYKAEGNVLSIGH 905
Score = 38.6 bits (88), Expect = 3.9, Method: Composition-based stats.
Identities = 42/249 (16%), Positives = 71/249 (28%), Gaps = 14/249 (5%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------APSYLYKIYRFENAIIV 327
G+D ++ + + G+DV DT + + Y + R +
Sbjct: 617 GDGDDKAFLSAGSANIYAGKGHDVVYY-DKTDTGYLTIDGTKATEAGNYTVTRVLGGDVK 675
Query: 328 YDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E + E+ ++ +N K + + S E+LI D F K
Sbjct: 676 VLQEVVKEQEVSVGKRTEKTQYRSYEFTHINGKNLTETDNLYSVEELIGTTRADKFFGSK 735
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
F ++G D+ + Y D N S + Y G + L
Sbjct: 736 FTDIFHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGNNYLN 795
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
++L V G EG D D L+ +G+D
Sbjct: 796 GGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGA----DLLDGGEGNDLLKGGYGNDIY 851
Query: 505 AAARHYITH 513
Y H
Sbjct: 852 RYLSGYGHH 860
>gi|332347849|gb|AEE60090.1| hemolysin structural protein HlyA [Escherichia coli UMNK88]
Length = 1024
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 57/199 (28%), Gaps = 34/199 (17%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + N + +++ G +G+D + G N+ +GN
Sbjct: 732 FGSKFTDIFHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGN 791
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D S +V L
Sbjct: 792 NYLNGGDGDDELQVQGNS-----------------------LAKNV--LFGGKGNDKLYG 826
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHF-----YEFGLSEGR----DITFDSYLYLG 406
+ +L+ + L G D++ + + + G E + DI F +
Sbjct: 827 SEGADLLDGGEGNDLLKGGYGNDIYRYLSGYGHHIIDDDGGKEDKLSLADIDFRDVAFKR 886
Query: 407 SYDDLRNVFGSDRGAAARH 425
+DL + H
Sbjct: 887 EGNDLIMYKAEGNVLSIGH 905
>gi|300864551|ref|ZP_07109414.1| hypothetical protein OSCI_950011 [Oscillatoria sp. PCC 6506]
gi|300337450|emb|CBN54562.1| hypothetical protein OSCI_950011 [Oscillatoria sp. PCC 6506]
Length = 328
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 73/182 (40%), Gaps = 14/182 (7%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRN--PDAFKALEYIASHEDLIN 454
FD YL Y +++ + H+ G G F Y+A + DL
Sbjct: 6 IFDEQYYLSQYGFVKDAVDRGLIGSGKEHFERFGQAAGLTKISRYFDEETYLAGNPDLTP 65
Query: 455 A--FADAPDLVQVGKDHFSNFGCEEGR-----FVTFDSYLYLGSYDDLRNVFGSDRG-AA 506
+ G DHF FG EEG ++ YL + +L + +
Sbjct: 66 FVRTVNPNAPFASGLDHFIQFGYEEGARRTQVSPEYNEDFYLRNNSELLPFIQNGTFKSG 125
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE-GRSI 565
+H+I +GV+EGR +F EY+ + +L+ ++ G+DH+ FG E RS
Sbjct: 126 YQHFIQYGVEEGRFGTSFFEPEYLEQNPNLVPFI--NSGALKTGRDHYFQFGQFEVNRSA 183
Query: 566 TF 567
TF
Sbjct: 184 TF 185
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 42/241 (17%), Positives = 76/241 (31%), Gaps = 28/241 (11%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ-----DVFESMKHFYEFGLSEG----- 394
RF + + Y A DL + + HF +FG EG
Sbjct: 37 RFGQAAGLTKISRYFDEETYLAGNPDLTPFVRTVNPNAPFASGLDHFIQFGYEEGARRTQ 96
Query: 395 RDITFDSYLYLGSYDDLRN-VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
++ YL + +L + + +H+I +GV+EGR +F EY+ + +L+
Sbjct: 97 VSPEYNEDFYLRNNSELLPFIQNGTFKSGYQHFIQYGVEEGRFGTSFFEPEYLEQNPNLV 156
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
G+DH+ FG E + +D+ G +
Sbjct: 157 PFINSGALKT--GRDHYFQFGQFEVNRS---ATFVGSRSNDVLTGVGVGNVELVGVEVGV 211
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ--------AGKDHFSNFGYEEGRSI 565
R ++F E + LI + ++ A + G R+
Sbjct: 212 DRSGNRQYESFGTNE----FDVLIGSPGTDNFVLGVPATSGNAAPTSLYLGNGQATIRNF 267
Query: 566 T 566
Sbjct: 268 D 268
>gi|113475313|ref|YP_721374.1| hypothetical protein Tery_1623 [Trichodesmium erythraeum IMS101]
gi|110166361|gb|ABG50901.1| hypothetical protein Tery_1623 [Trichodesmium erythraeum IMS101]
Length = 613
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 59/337 (17%), Positives = 98/337 (29%), Gaps = 38/337 (11%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
F + + +SD F N T +D GI I + + I
Sbjct: 193 FIQGTFNSDTVFGFGGN---DTIDGQDGNDSLFGNSGSDSIVGGIDDDIIFGNVGIDTID 249
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
G + G + +ND+ + S + S D +G + + V
Sbjct: 250 GQDGNDSILGNEDDDILGGGE---DNDTIRGNTGSDEIDGGSGDDGLYGNVGSDSIFGNV 306
Query: 190 AVQKIYGAPKGS-----LGNNIYKIEVQQ---KDSPFIQTIYDSGGDDLL---------- 231
I+G GN+ K I+ + D L
Sbjct: 307 GNDSIWGNEDSDRLEGGPGNDSIWGNEDSDRIKGGFGDDNIWGNENSDRLEGGFGNDSVV 366
Query: 232 ----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+ ++ G N E SI G E N +I + +S+ G+ GND + GN N+
Sbjct: 367 GNEGNDSIFGNEGNDSIFGNEENDSIFGNEGNDSIFGNEGNDSIFGNEGNDSIFGNQGND 426
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+SG+D G G D L + + + F + L F
Sbjct: 427 CLESNSGDDTIRGGKGDDIV--DGGFDLDFLLGELGNDQLSGGDGDDLIFGGKDDDLIF- 483
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L + + +I +G D
Sbjct: 484 -------GGGGNDTLNGDMNNDTIIGQLGNDFIIGTS 513
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/336 (12%), Positives = 94/336 (27%), Gaps = 20/336 (5%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
++IG T + ++ G+ N TI +S+ G+SG+D ++G +++ F +
Sbjct: 184 SIIGNNSTQFIQGTFNSDTVFGFGGNDTIDGQDGNDSLFGNSGSDSIVGGIDDDIIFGNV 243
Query: 294 GNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLS-DVERLR 345
G D DG G D+ I + + + + + + +
Sbjct: 244 GIDTIDGQDGNDSILGNEDDDILGGGEDNDTIRGNTGSDEIDGGSGDDGLYGNVGSDSIF 303
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD-----ITFD 400
+ LE + + D + +E D D
Sbjct: 304 GNVGNDSIWGNEDSDRLEGGPGNDSIWGNEDSDRIKGGFGDDNIWGNENSDRLEGGFGND 363
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFKALEYIASHEDLINAF 456
S + D + G+D + G + ++ ++ +
Sbjct: 364 SVVGNEGNDSIFGNEGNDSIFGNEENDSIFGNEGNDSIFGNEGNDSIFGNEGNDSIFGNQ 423
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
+ G D ++ FD LG + + G +
Sbjct: 424 GNDCLESNSGDDTIRGGKGDDIVDGGFDLDFLLGELGNDQLSGGDGDDLI---FGGKDDD 480
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L +++ +I + + + K
Sbjct: 481 LIFGGGGNDTLNGDMNNDTIIGQLGNDFIIGTSLKS 516
Score = 44.8 bits (104), Expect = 0.052, Method: Composition-based stats.
Identities = 48/309 (15%), Positives = 84/309 (27%), Gaps = 47/309 (15%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
N + + + +D G G +I + I G
Sbjct: 285 DGGSGDDGLYGNVGSDSIFGNVGNDSIWGNEDSDRLEGGPGNDSIWGNEDSDRIKGGFGD 344
Query: 135 MHPGSYNG------GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
+ G+ V + NDS + + + + D+ FG +
Sbjct: 345 DNIWGNENSDRLEGGFGNDSVVGNEGNDSIFGNEGNDSIFGNEENDSIFGNEGNDSIFGN 404
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
I+G +G+ + + + TI GDD++D GG L
Sbjct: 405 EGNDSIFG-NEGNDSIFGNQGNDCLESNSGDDTIRGGKGDDIVD----GGFDLDFLLGEL 459
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG-------- 300
+ G + + I + + G GND + G+ N+ GND G
Sbjct: 460 GNDQLSGGDGDDLIFGGKDDDLIFGGGGNDTLNGDMNNDTIIGQLGNDFIIGTSLKSGEN 519
Query: 301 -------SSGLDTFFYYAPSYLYKIYR---------------------FENAIIVYDANE 332
S G DTF + + + F IV
Sbjct: 520 EIDFLIGSEGTDTFVLGNSNVAFYSFAGSSDYAVVTDLNNLESDKMIVFGGDGIVLGPAS 579
Query: 333 HKQDFLSDV 341
D + +
Sbjct: 580 VGTDQGTGI 588
>gi|186683528|ref|YP_001866724.1| hemolysin-type calcium-binding region [Nostoc punctiforme PCC 73102]
gi|186465980|gb|ACC81781.1| Hemolysin-type calcium-binding region [Nostoc punctiforme PCC 73102]
Length = 1687
Score = 74.8 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 73/509 (14%), Positives = 128/509 (25%), Gaps = 42/509 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D DS + D D+ + + G
Sbjct: 1042 YGGDGDDQLYGRQGDDQLYGDSGNDLLDGGDGNDLLFGNANNDRLFGQAGTDILYGGSGD 1101
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ +G +YG N+ + + G + +
Sbjct: 1102 DYLDGGDGNDSLYGDANNDILYGQSGDDYLEGGDGNDGLFGGAGQDTLFGQAGDDKLDGG 1161
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G K + G+ + GDD LD GG N + + +
Sbjct: 1162 DGNDKLNGGD----GNDVLYGQAGDDYLTGQAGDDFLD----GGQGNDLLYGNDGNDQLY 1213
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N I + + G G+D + G +++ + +G D+ DG G D +
Sbjct: 1214 GQQGNDFIYGGAGSDFLDGGEGDDFLYGQGSDDRLYGQAGRDLLDGDIGND--VLDGGTG 1271
Query: 315 LYKIYRFENAIIVYDANEH-------KQDFLSDVERLRFADQCIDSVNVKQ--------- 358
++Y + + ++ D+L E F ++
Sbjct: 1272 DDQLYGRDGIDSLNGGADNDLLVGGLGSDYLLGGEGNDFLYGDDETHTYGNGYGDSLSGN 1331
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGL------SEGRDITFDSYLYLGSYDDLR 412
L+ + ++L G D EG D+ D L
Sbjct: 1332 NDTLDGSIGNDNLYGGFGNDSLIGGDGSDLLIGDDQLITGEGNTYNSDTSTLYSGNDTLI 1391
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
G D + + EG + + F ++ D S
Sbjct: 1392 AGAGDDYLEGSLGRDSLLGGEGNDFLFGDFPFFAGQSNKTEGQFDESHGYNNDTLDGGSG 1451
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT---------HGVKEGRNPDA 523
EG F D D L FG+ G + T G
Sbjct: 1452 HDYLEGGF-GNDLLFGGEGDDFLYGDFGNGYGYNDNQFNTVDNGYDFYGSGNDYLDGGAG 1510
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKD 552
L ++ LI D + G D
Sbjct: 1511 NDYLNGNDGNDTLIGGQGDDYLVGGNGND 1539
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 86/650 (13%), Positives = 161/650 (24%), Gaps = 67/650 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S G + + D D G G T+ I +G+
Sbjct: 855 YAGGGNDTVSGGGGDDILFGEDGNDIIRGDDGDDFLVGGKGADTLDGGFFGTTILGFIGV 914
Query: 135 MHPGSYNGGYPV----YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+N G V + + D G + +
Sbjct: 915 DTASYFNSGSGVAVSLTTGTGSAGDAKGDVLTGIENLEGSEYDDNLQGDAGNNQICGLGG 974
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDL 245
IYG N + I I G+D L GG + +
Sbjct: 975 NDLIYGEAGNDTLNGNEG-NDRLYGGNGIDIISGDNGNDQLYGENDNDQLFGGNGDDLLD 1033
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ ++ G + + + + + G SGND++ G N++ F ++ ND G +G D
Sbjct: 1034 GGQGLDTLYGGDGDDQLYGRQGDDQLYGDSGNDLLDGGDGNDLLFGNANNDRLFGQAGTD 1093
Query: 306 TFF----------------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+ Y + +Y + + + F + F
Sbjct: 1094 ILYGGSGDDYLDGGDGNDSLYGDANNDILYGQSGDDYLEGGDGNDGLFGGAGQDTLFGQA 1153
Query: 350 CIDSV----------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
D + +L A + L G D + + ++G D +
Sbjct: 1154 GDDKLDGGDGNDKLNGGDGNDVLYGQAGDDYLTGQAGDDFLDGGQGNDLLYGNDGNDQLY 1213
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
Y + F Y L+ ++ L D
Sbjct: 1214 GQQGNDFIYGGAGSDFLDGGEGDDFLYGQGSDDRLYGQAGRDLLDGDIGNDVLDGGTGDD 1273
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
+ G D + + S LG + + Y
Sbjct: 1274 QLYGRDGIDSLNGGADNDLLVGGLGSDYLLGGEGNDFLYGDDETHTYGNGYGDS------ 1327
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY---EEGRSITFNPDLYLTSY 576
L+ +++L F + + G D EG + + +
Sbjct: 1328 LSGNNDTLDGSIGNDNLYGGFGNDSLIGGDGSDLLIGDDQLITGEGNTYNSDTSTLYSGN 1387
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKK 636
D L G D + + EG F + + + + + D
Sbjct: 1388 DTLIAGAGDDYLEGSLGRDSLLGGEGNDFLFGDFPFFAGQSNKTEGQFDESHGYNNDTLD 1447
Query: 637 V----------------------DLYTDYFGDGNYYDSDLYSMHDINHDF 664
D FG+G Y+ + ++ D +DF
Sbjct: 1448 GGSGHDYLEGGFGNDLLFGGEGDDFLYGDFGNGYGYNDNQFNTVDNGYDF 1497
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/394 (11%), Positives = 89/394 (22%), Gaps = 23/394 (5%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
I S + + + D G G I G
Sbjct: 229 IGIGSGSVSNAKLTLGAINITIGPGNEGNDFLSGGNGDDIAFGDRGNDTINGDAGSDVLI 288
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
G + G D S F + D G ++ + G
Sbjct: 289 GGAGSDVINGGTEDDVLVGDYVITQSQFDLGAAGNDTISGGAGNDIILGDGGNDSLDGGD 348
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
TI +D++ + N + G E
Sbjct: 349 GT----------DTILGGANNDTISGGVDNDIIFGDYFIPQGFDVVNNGTTSVIDLGPEG 398
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N +I+ T + + G GND + G+ ++ +G D G S D +
Sbjct: 399 NDSISGGTGNDIISGDGGNDTINGDQGEDILIGGTGRDSISGGSENDVILGDFLELPNAL 458
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + + + S I+ +++ G D
Sbjct: 459 KSL--------LTPAQLAQIPGINKFGVSGGDTISGGA-GNDIISGDGGDDNINGDEGND 509
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH----YITHGVKEG 434
G DI F Y ++ + N + + G
Sbjct: 510 TILGGADSDNINGGIGNDIIFGDYFLPQRFNTVSNGVSTSIDLGPEGNDTIFGGVGNDII 569
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
++ + ++ G D
Sbjct: 570 SGDGGNDNIDGGDGTDIILGGSGSDVLNGSAGDD 603
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/424 (11%), Positives = 96/424 (22%), Gaps = 33/424 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+D + + D + + +G
Sbjct: 1204 YGNDGNDQLYGQQGNDFIYGGAGSDFLDGGEGDDFLYGQGSDDRLYGQAGRDLLDGDIGN 1263
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G +YG D + + + + G +
Sbjct: 1264 DVLDGGTGDDQLYGRDGIDSLNGGADNDLLVGGLGSDYLLGGEGNDFLYGDDETHTYGNG 1323
Query: 195 YGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
YG + + ++ G DLL + NT + +
Sbjct: 1324 YGDSLSGNNDTLDGSIGNDNLYGGFGNDSLIGGDGSDLLIGDDQLITG---EGNTYNSDT 1380
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE--------------------S 292
Y N T+ + + GS G D ++G N+ F
Sbjct: 1381 STLYSGNDTLIAGAGDDYLEGSLGRDSLLGGEGNDFLFGDFPFFAGQSNKTEGQFDESHG 1440
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
ND DG SG D + ++ E +Y + + +
Sbjct: 1441 YNNDTLDGGSGHD--YLEGGFGNDLLFGGEGDDFLYGDFGNGYGYNDNQFNTVDNG---Y 1495
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS--YDD 410
L+ A + L G D + G D + + +
Sbjct: 1496 DFYGSGNDYLDGGAGNDYLNGNDGNDTLIGGQGDDYLVGGNGNDQLYGENIPGDNQKIPT 1555
Query: 411 LRNVFGSDRGAAARHYITHGVKE-GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
V S + ++ + L + + L F + G D
Sbjct: 1556 DSLVKISVDHNGKPQFQDIAYRDILLGGNGADLLVAGSGNSVLDGGFGNDTLYGSAGIDQ 1615
Query: 470 FSNF 473
F +
Sbjct: 1616 FVLY 1619
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/384 (12%), Positives = 82/384 (21%), Gaps = 45/384 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + + G D + ++ +I
Sbjct: 773 SGNDLLVGNAGYDVLDGNDGIDTVSYRRDPKGVTVTLGFLSVPGLGIAFDGFGSIDALNS 832
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------------------- 308
IE+++GS+ ND + G+ N + GND G G D F
Sbjct: 833 IENIIGSNFNDQLTGDINKNAIYAGGGNDTVSGGGGDDILFGEDGNDIIRGDDGDDFLVG 892
Query: 309 ------YYAPSYLYKIYRFENAIIVY-----------------DANEHKQDFLSDVERLR 345
+ I F A + K D L+ +E L
Sbjct: 893 GKGADTLDGGFFGTTILGFIGVDTASYFNSGSGVAVSLTTGTGSAGDAKGDVLTGIENLE 952
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
++ + + + + + G D + G DI
Sbjct: 953 GSEYDDNLQGDAGNNQICGLGGNDLIYGEAGNDTLNGNEGNDRLYGGNGIDIISGDNGND 1012
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
Y + N G+ D L + L +
Sbjct: 1013 QLYGENDNDQLFGGNGDDLLDGGQGLDTLYGGDGDDQLYGRQGDDQLYGDSGNDLLDGGD 1072
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
G D + F Y + + Y
Sbjct: 1073 GNDLLFGNANNDRL---FGQAGTDILYGGSGDDYLDGGDGNDSLYGDANNDILYGQSGDD 1129
Query: 526 ALEYIASHEDLINAFADAPDLVQA 549
LE ++ L QA
Sbjct: 1130 YLEGGDGNDGLFGGAGQDTLFGQA 1153
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 34/328 (10%), Positives = 77/328 (23%), Gaps = 29/328 (8%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G ++ I + + G GND + G ++ ND G G D
Sbjct: 115 GGSDLLNGLDQTDIILGDALGPNDDGIDGNDTLNGFGGADILIGGGANDQIFGGDGNDIL 174
Query: 308 FYYAPSYLYKIYRFEN----------------AIIVYDANEHKQDFLSDVERLRFADQCI 351
+ + + + ++
Sbjct: 175 LGDYLPGIPTTTITGSDLVPSGSVPSPIIFNPSDFSFRDPRSNNALFPALDLFFIGIGSG 234
Query: 352 DSVNVKQR------SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
N K +I + L G D+ + G D+
Sbjct: 235 SVSNAKLTLGAINITIGPGNEGNDFLSGGNGDDIAFGDRGNDTINGDAGSDVL-----IG 289
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
G+ D+ N D Y+ + + A ++ ++ +
Sbjct: 290 GAGSDVINGGTEDDVL-VGDYVITQSQFDLGAAGNDTISGGAGNDIILGDGGNDSLDGGD 348
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN-VFGSDRGAAARHYITHGVKEGRNPDAF 524
G D + D+ + G Y + ++ + G
Sbjct: 349 GTDTILGGANNDTISGGVDNDIIFGDYFIPQGFDVVNNGTTSVIDLGPEGNDSISGGTGN 408
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKD 552
+ ++ + + + G+D
Sbjct: 409 DIISGDGGNDTINGDQGEDILIGGTGRD 436
Score = 42.5 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 46/262 (17%), Positives = 75/262 (28%), Gaps = 28/262 (10%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
N T S I D +G+ ++L + G N
Sbjct: 1373 GNTYNSDTSTLYSGNDTLIAGAGDDYLEGSLGRDSLLGGEGNDFLFGDF-PFFAGQSNKT 1431
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ + Y ND+ ++ D FG + Y + +
Sbjct: 1432 EGQFDESHGYNNDTLDGGSGHDYLEGGFGNDLLFGGEGDDFLYGDFGNGYGYNDNQFNTV 1491
Query: 204 NNIYKI----------------------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+N Y + G+D L I G
Sbjct: 1492 DNGYDFYGSGNDYLDGGAGNDYLNGNDGNDTLIGGQGDDYLVGGNGNDQLYGENIPGDNQ 1551
Query: 242 YI--DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
I D + G + IA + ++G +G D+++ S N+V GND
Sbjct: 1552 KIPTDSLVKISVDHNGKPQFQDIAYR---DILLGGNGADLLVAGSGNSVLDGGFGNDTLY 1608
Query: 300 GSSGLDTFFYYAPSYLYKIYRF 321
GS+G+D F Y + IY F
Sbjct: 1609 GSAGIDQFVLYPGAGSDIIYNF 1630
>gi|327271606|ref|XP_003220578.1| PREDICTED: matrix metalloproteinase-24-like [Anolis carolinensis]
Length = 604
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 48/161 (29%), Gaps = 30/161 (18%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W +V LTFEE H
Sbjct: 117 LTGQKWRQKHITYSVHNYTPKVGELD-------TRKAIRQAFDVWQRVTPLTFEEVPYHE 169
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + D+
Sbjct: 170 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNSN 229
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 230 HDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 270
>gi|119490780|ref|ZP_01623112.1| hypothetical protein L8106_04039 [Lyngbya sp. PCC 8106]
gi|119453764|gb|EAW34922.1| hypothetical protein L8106_04039 [Lyngbya sp. PCC 8106]
Length = 1857
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 75/247 (30%), Gaps = 21/247 (8%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
++N + D + D+ + S S + ++ + SD+
Sbjct: 1511 NNHNILNDNFLNSLDLKQDNDVDSSSSRWADINTGEVSGNVLVIAASTSDVT-------P 1563
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
N+ +V + I +GG+D + + I+ I G E
Sbjct: 1564 EDRFNIKNLEVQQVATEPPNPGNVINGTGGNDDI---KGTVNNDEIN-GLGGDDKIEGKE 1619
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + + + G GND + G++ ++ GND +G G D
Sbjct: 1620 GNDILNGGEGKDELKGDDGNDTLNGDAGDDKLDGQDGNDTLNGGEGQDEL---KGGKQDD 1676
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + D + D L+ E + K +L A + L
Sbjct: 1677 LLNGDAGDDKLDG-QDGNDTLNGGE------GQDELKGNKGDDLLNGDAGNDSLYGGEDN 1729
Query: 378 DVFESMK 384
D+ +
Sbjct: 1730 DILIGVD 1736
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 49/422 (11%), Positives = 98/422 (23%), Gaps = 53/422 (12%)
Query: 60 GEWSKVVDLTFEETSIHS--DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
+ +T + + F + N + R F + +G
Sbjct: 1376 QTVDETFSVTVNSVAPPDPVNKTFDFTGNSGSDGADGNIRSFNAGDISVKTSAFSRSEQG 1435
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
L LG+ NG + VDN Y+ + L + + +D
Sbjct: 1436 N-WEQAFLGSFSGGLGVTDSSEGNGSNDLNLVDNVYQQNYVLFEFSEKVVVDRAFLD--- 1491
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
V + + G + F+ ++ +D +
Sbjct: 1492 ------SVVNDSDITYWVGTKNN------PFNNHNILNDNFLNSLDLKQDND---VDSSS 1536
Query: 238 GVKNYIDLNT--ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
I+ + I ++T I+++ + NV + GN
Sbjct: 1537 SRWADINTGEVSGNVLVIAASTSDVTPEDRFNIKNL--EVQQVATEPPNPGNVINGTGGN 1594
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G+ D + D L+ E
Sbjct: 1595 DDIKGTVNND-------------EINGLGGDDKIEGKEGNDILNGGE------------- 1628
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ L+ + L G D + EG+D D +
Sbjct: 1629 --GKDELKGDDGNDTLNGDAGDDKLDGQDGNDTLNGGEGQDELKGGKQDDLLNGDAGDDK 1686
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ G E + L A ++ L + + + G
Sbjct: 1687 LDGQDGNDTLNGGEGQDELKGNKGDDLLNGDAGNDSLYGGEDNDILIGVDPNSTQAGLGE 1746
Query: 476 EE 477
+
Sbjct: 1747 ID 1748
>gi|254425651|ref|ZP_05039368.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196188074|gb|EDX83039.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 838
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 66/194 (34%), Gaps = 5/194 (2%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL----NTESWS 251
G + G + + G + + + + I + TE+
Sbjct: 218 GGADINDGGEGIDTANFSDIGAPVTALLGQGLASYVPASGVTVIDTLISIENLSGTENDD 277
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G I + V G G+DV+ GN ++V GND +G +G DT +
Sbjct: 278 QLFGDRGTNVIDGGGGNDLVAGGGGDDVLQGNEGDDVLRGGGGNDTLNGGNGNDTADFSD 337
Query: 312 PSYLYKIYRFENAIIVYDANEHK-QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +++ A+ D LS++E L + +++ A +
Sbjct: 338 IGFEVTANLAQSSANYVVASGANVVDSLSNIENLSGSSNDDHLTGDDASNLIAGAAGDDT 397
Query: 371 LIQVIGQDVFESMK 384
L+ G DV +
Sbjct: 398 LLGGDGDDVLRGDE 411
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/241 (12%), Positives = 66/241 (27%), Gaps = 11/241 (4%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+N I E + G+ GND++ G + GNDV G G D
Sbjct: 164 GGAIRGQFLGENAPIVGTAAAEELQGTEGNDILDGLGGGDTLVGLGGNDVLLGGGGADIN 223
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQ----------DFLSDVERLRFADQCIDSVNVK 357
+ D L +E L + +
Sbjct: 224 DGGEGIDTANFSDIGAPVTALLGQGLASYVPASGVTVIDTLISIENLSGTENDDQLFGDR 283
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-DSYLYLGSYDDLRNVFG 416
++++ + + G DV + + G D + + D+
Sbjct: 284 GTNVIDGGGGNDLVAGGGGDDVLQGNEGDDVLRGGGGNDTLNGGNGNDTADFSDIGFEVT 343
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
++ ++ +Y+ + + +S++D + + + D G
Sbjct: 344 ANLAQSSANYVVASGANVVDSLSNIENLSGSSNDDHLTGDDASNLIAGAAGDDTLLGGDG 403
Query: 477 E 477
+
Sbjct: 404 D 404
Score = 42.1 bits (97), Expect = 0.34, Method: Composition-based stats.
Identities = 28/220 (12%), Positives = 51/220 (23%), Gaps = 22/220 (10%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ ID ++ GG + + I I+ + GNDV+ G +++ +G
Sbjct: 618 GLTAPGAMIDPVVGDFTQNGGEDLLLRI----TIDELAAQGGNDVIDGGLGDDLIEGGAG 673
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+D+ G G D + + N
Sbjct: 674 SDLLAGGLGDD--VLFGGKGDDTLRGDLNNRNPQVG----------------VGGNDVLR 715
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ + L G D+ G D GS D +
Sbjct: 716 GGAGNDAIGGKGGNDQLFGDDGDDLLFGDDGDDILTGGAGNDRLQGDDFSGGSGADTFVI 775
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
+ G A + + L
Sbjct: 776 EAGAGTDTIVDFQLGTDLIGLGAGLSFAQLSLRGNSILFG 815
Score = 39.4 bits (90), Expect = 1.8, Method: Composition-based stats.
Identities = 25/173 (14%), Positives = 45/173 (26%), Gaps = 10/173 (5%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G+ I + GG+D++D GG+ + + + G + +
Sbjct: 631 GDFTQNGGEDLLLRITIDELAAQGGNDVID----GGLGDDLIEGGAGSDLLAGGLGDDVL 686
Query: 263 AQHTVIESVVGSSGNDVVIGN-SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+++ G N N+V +GND G G D F
Sbjct: 687 FGGKGDDTLRGDLNNRNPQVGVGGNDVLRGGAGNDAIGGKGGNDQ----LFGDDGDDLLF 742
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQ 373
+ D L + + + DLI
Sbjct: 743 GDDGDDILTGGAGNDRLQGDDFSGGSGADTFVIEAGAGTDTIVDFQLGTDLIG 795
>gi|119494081|ref|ZP_01624624.1| hypothetical protein L8106_01087 [Lyngbya sp. PCC 8106]
gi|119452183|gb|EAW33386.1| hypothetical protein L8106_01087 [Lyngbya sp. PCC 8106]
Length = 484
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 81/266 (30%), Gaps = 10/266 (3%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + +I G + + ++ + + + G ND ++G S N+ + G+D
Sbjct: 158 GTNNRDLITGRGGDDTISGLQADDSLNGNDGNDIIYGGRNNDTLLGESGNDFLQGNIGDD 217
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+G +G DTF+ + + ++Y + D L E +
Sbjct: 218 YLEGGTGNDTFY--GGVNVDTLLGGTGNDLLY--GDKGDDTLDGGE------RNDTLFGG 267
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ L A + LI G D+ + +D F D ++ F
Sbjct: 268 EDNDTLTGDAGDDILIGNAGSDLLDGGADEDVLYGGLDQDSLFGGDGKDFLRGDRQDDFL 327
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
A+ Y + ++ LI ++ + D
Sbjct: 328 DGGTASDLLYGGRADDTVIGGTGNDYVSGDKGNDLLIGVDVESDIPGLIEIDTLYGGDGF 387
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ + ++ +Y + D D
Sbjct: 388 DTFVLGDEAQVYYDNQTDDDFSGVDD 413
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/240 (13%), Positives = 62/240 (25%), Gaps = 8/240 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N + + + G G+D + G A++ + GND+ G DT
Sbjct: 147 LEGDDGNNLLIGTNNRDLITGRGGDDTISGLQADDSLNGNDGNDIIYGGRNNDTLL--GE 204
Query: 313 SYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
S + + + + +V+ L K L+ + L
Sbjct: 205 SGNDFLQGNIGDDYLEGGTGNDTFYGGVNVDTLLGGTGNDLLYGDKGDDTLDGGERNDTL 264
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFD--SYLYLGSYDDLRNVFGSDRGAAARHYITH 429
D + G D+ L D ++FG D R
Sbjct: 265 FGGEDNDTLTGDAGDDILIGNAGSDLLDGGADEDVLYGGLDQDSLFGGDGKDFLRGDRQ- 323
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+ + L Y +D + + + E L
Sbjct: 324 --DDFLDGGTASDLLYGGRADDTVIGGTGNDYVSGDKGNDLLIGVDVESDIPGLIEIDTL 381
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 66/225 (29%), Gaps = 16/225 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ T+ G+DLL G + E ++ G E N T+
Sbjct: 223 TGNDTFYGGVNVDTLLGGTGNDLL----YGDKGDDTLDGGERNDTLFGGEDNDTLTGDAG 278
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ ++G++G+D++ G + +V + D G G D F + + ++
Sbjct: 279 DDILIGNAGSDLLDGGADEDVLYGGLDQDSLFGGDGKD--FLRGDRQDDFLDGGTASDLL 336
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
Y + K +L D+ +I D F
Sbjct: 337 YGGRADDT--------VIGGTGNDYVSGDKGNDLLIGVDVESDIPGLIEIDTLYGGDGFD 388
Query: 388 EFGLSEGRDITFD--SYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
F L + + +D + DD + D G
Sbjct: 389 TFVLGDEAQVYYDNQTDDDFSGVDDYALILDFDSTQDIIQLSASG 433
>gi|326328617|ref|ZP_08194957.1| putative iron-regulated protein FrpC [Nocardioidaceae bacterium
Broad-1]
gi|325953578|gb|EGD45578.1| putative iron-regulated protein FrpC [Nocardioidaceae bacterium
Broad-1]
Length = 523
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/204 (14%), Positives = 50/204 (24%), Gaps = 5/204 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
I G D +D L I G ++ T
Sbjct: 63 GGGDNIFGKGGDDLIDAGAGGDHVDAGYGADRV----LAGSGEDWIEGDGGKDSLNGGTG 118
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G G DV+ G ++ + +G D G +G DT S + I
Sbjct: 119 QDYMWGDDGGDVISGGDQLDIIYGGAGTDRIYGGAGGDTLR-GGTSDDAISGGGGSDWIG 177
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ L + + + ++ L G D
Sbjct: 178 GGDGNDSASGGDGNDVLFGNLGDDELHGNNHLDTVNGGSGHDRLWGDSGDDAVTGGDGND 237
Query: 388 EFGLSEGRDITFDSYLYLGSYDDL 411
+ G D + Y D+
Sbjct: 238 KLSGGAGLDEVHGNAGTNTCYYDV 261
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 61/236 (25%), Gaps = 20/236 (8%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
TI + G D L +G + + +I G + I + V G D V
Sbjct: 40 TIVGTSGADEL----VGTSRRDVICGRGGGDNIFGKGGDDLIDAGAGGDHVDAGYGADRV 95
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-------FENAIIVYDANEH 333
+ S + G D +G +G D + + I + A
Sbjct: 96 LAGSGEDWIEGDGGKDSLNGGTGQD--YMWGDDGGDVISGGDQLDIIYGGAGTDRIYGGA 153
Query: 334 KQDFLSD---VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D L + + + L +G D H
Sbjct: 154 GGDTLRGGTSDDAISGGGGSDWIGGGDGNDSASGGDGNDVLFGNLGDDELHGNNHLDTVN 213
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G D + D + G+D+ + G N + +Y+
Sbjct: 214 GGSGHDRLWGDSGD----DAVTGGDGNDKLSGGAGLDEVHGNAGTNTCYYDVFDYL 265
Score = 42.1 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 52/239 (21%), Gaps = 3/239 (1%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T P+ IV + + S + + + +++
Sbjct: 21 TVLVATPASAATTSTGVRCTIVGTSGADELVGTSRRDVICGRGGGDNIFGKGGDDLIDAG 80
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A + + G D + G+D + D S
Sbjct: 81 AGGDHVDAGYGADRVLAGSGEDWIEGDGGKDSLNGGTGQDYMWGDDGGDVISGGDQLDII 140
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
Y G L S + + G D + +G V F +
Sbjct: 141 YGGAGTDRIYGGAGGDTLRGGTSDDAISGGGGSDWIGGGDGND---SASGGDGNDVLFGN 197
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
+ + + R + G D L A +++
Sbjct: 198 LGDDELHGNNHLDTVNGGSGHDRLWGDSGDDAVTGGDGNDKLSGGAGLDEVHGNAGTNT 256
>gi|113954869|ref|YP_729927.1| type I secretion target GGXGXDXXX repeat-containing protein
[Synechococcus sp. CC9311]
gi|113882220|gb|ABI47178.1| type I secretion target GGXGXDXXX repeat protein [Synechococcus sp.
CC9311]
Length = 246
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 53/162 (32%), Gaps = 10/162 (6%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
T+ G ++ ++ + + + G +GND + G+ N+ S G+D G SG D
Sbjct: 25 GTDGDDKKYGSVQDDRLSGGSGNDRLNGYTGNDKLFGDDGNDYLEGSDGDDTLWGGSGAD 84
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ Y ++Y + + L D + L
Sbjct: 85 --YLYGGVDNDRLYGGSGQDYLIGQ--------VGNDILDGGDGNDKLLGGWGNDTLAGG 134
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
A + L G D F +S GRD D + G
Sbjct: 135 AGMDVLNGGDGNDTLTGGVGADVFVMSNGRDTITDFRIEDGD 176
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 41/128 (32%), Gaps = 3/128 (2%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G+ G+D G+ ++ SGND +G +G D F + + ++ +
Sbjct: 24 TGTDGDDKKYGSVQDDRLSGGSGNDRLNGYTGNDKLF--GDDGNDYLEGSDGDDTLWGGS 81
Query: 332 EHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ D +RL + IL+ + L+ G D
Sbjct: 82 GADYLYGGVDNDRLYGGSGQDYLIGQVGNDILDGGDGNDKLLGGWGNDTLAGGAGMDVLN 141
Query: 391 LSEGRDIT 398
+G D
Sbjct: 142 GGDGNDTL 149
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 45/135 (33%), Gaps = 7/135 (5%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
Y G++ + S T++ G D L GGV N +
Sbjct: 53 YTGNDKLFGDD---GNDYLEGSDGDDTLWGGSGADYL----YGGVDNDRLYGGSGQDYLI 105
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + ++G GND + G + +V GND G G D F
Sbjct: 106 GQVGNDILDGGDGNDKLLGGWGNDTLAGGAGMDVLNGGDGNDTLTGGVGADVFVMSNGRD 165
Query: 315 LYKIYRFENAIIVYD 329
+R E+ ++
Sbjct: 166 TITDFRIEDGDKIFV 180
Score = 40.5 bits (93), Expect = 0.81, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 26/133 (19%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
D Q L + + L G D S+G D +
Sbjct: 24 TGTDGDDKKYGSVQDDRLSGGSGNDRLNGYTGNDKLFGDDGNDYLEGSDGDDTLWGGSGA 83
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
Y + N G D L ++ L
Sbjct: 84 DYLYGGVDNDRLYGGSGQDYLIGQVGNDILDGGDGNDKLLGGWGNDTLAGGAGMDVLNGG 143
Query: 465 VGKDHFSNFGCEE 477
G D + +
Sbjct: 144 DGNDTLTGGVGAD 156
Score = 39.0 bits (89), Expect = 2.6, Method: Composition-based stats.
Identities = 16/136 (11%), Positives = 28/136 (20%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
RL L + L G D D +
Sbjct: 40 RLSGGSGNDRLNGYTGNDKLFGDDGNDYLEGSDGDDTLWGGSGADYLYGGVDNDRLYGGS 99
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
+ N + G L ++ L +
Sbjct: 100 GQDYLIGQVGNDILDGGDGNDKLLGGWGNDTLAGGAGMDVLNGGDGNDTLTGGVGADVFV 159
Query: 463 VQVGKDHFSNFGCEEG 478
+ G+D ++F E+G
Sbjct: 160 MSNGRDTITDFRIEDG 175
>gi|327269601|ref|XP_003219582.1| PREDICTED: matrix metalloproteinase-16-like [Anolis carolinensis]
Length = 610
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 58/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-- 75
L Q W + I Y +T + ++ R A W V LTFEE
Sbjct: 124 LTGQKWQHKHITYSIKNVTPKVG-------DAETRKAIRRAFDVWQNVTPLTFEEVPYIE 176
Query: 76 ------HSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 177 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 236
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 237 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 277
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 278 --FKLPN----DDLQGIQKIYGPPD 296
>gi|288940023|ref|YP_003442263.1| peptidase M10 serralysin [Allochromatium vinosum DSM 180]
gi|288895395|gb|ADC61231.1| Peptidase M10 serralysin [Allochromatium vinosum DSM 180]
Length = 1019
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 55/372 (14%), Positives = 103/372 (27%), Gaps = 29/372 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----------SIGGYE 257
+ G D + N + +T ++G
Sbjct: 108 GGNDTLDGKAGADIMIGGDGADTYIVDNDSDQVNETNASTGLDQWDTVKSSVSYTLGANV 167
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY- 316
+ + + T I + G++ +V+IGNSA N G+D +G +G DT+ +
Sbjct: 168 EQLNLTGATAI-NGTGNTLKNVLIGNSAANRLDGGKGDDRMEGGNGNDTYVVDSTKDEVI 226
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVI 375
+ + + ++VE L +S + L + L V
Sbjct: 227 ETSALAAGGVDTVESWISYTLTANVENLLLLGTANNSATGNTLNNRLTGNSGSNRLDGVT 286
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D E + + + + + + D A+ Y E
Sbjct: 287 GADTMEGGDGQDVY-------VVNSADDVVIETNTSTSSLQIDLVEASLSYTLTANVEWL 339
Query: 436 NPDAFKALEYIASHED--LINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSY 492
++ + D LI + G D + + S + +
Sbjct: 340 QLMGTTSINATGNTGDNLLIANVGNNVFDGVSGNDTVSYSLSSPYIASINPKSSINQSAN 399
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDA------FKALEYIASHEDLINAFADAPDL 546
L V S A+ I G+ + N D L +S L +
Sbjct: 400 PALAGVKVSLAVTGAQATIGSGMDKLNNIDNLIGSRFNDQLTGNSSANILDGGLGADVLI 459
Query: 547 VQAGKDHFSNFG 558
G D + G
Sbjct: 460 GGDGNDIYYVDG 471
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 51/340 (15%), Positives = 92/340 (27%), Gaps = 26/340 (7%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA----LHEIGHAL 132
+ N + + + L +G A
Sbjct: 590 GSVNLTGKGNTLANVIYANVGDNLLDGVKNTSSSSKDTLSYEFGATAGVRVNLSLLGSAQ 649
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G+ + + L S + + Y + S I+ +
Sbjct: 650 NTGGSGTDTLVGDSFHNLTGSYYNDILQGTTSDNVLNGLGGSDTVSYENSATGSVIINLN 709
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI--------D 244
G + S F TI S G++++D L +Y+ +
Sbjct: 710 LSTRQNTLGSGGDTLLSIENITGSTFDDTIIASSGNNIMDGGLGSDTVSYVKSDGLVAVN 769
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L + + GG K+ I IE+++GS+ ND + GN+ N G D G +G
Sbjct: 770 LAVTTAQNTGGSGKDTLI----KIENLIGSNYNDSLTGNTGANRLDGGKGADALKGGAGD 825
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF--------ADQCIDSVNV 356
D + + + V + ++E L A+
Sbjct: 826 DVYVVDNAGDVVTEAFSQGNDTV--QSWINLTLGGNIENLELMYDKSLGDANNPKTGTGN 883
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ L A L + G DV + G D
Sbjct: 884 TLNNTLTGNALSNTLSGLGGNDVLDGAGGQDSLTGGGGAD 923
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/336 (11%), Positives = 93/336 (27%), Gaps = 23/336 (6%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
D +S +S + + ++ G + + + +
Sbjct: 218 VDSTKDEVIETSALAAGGVDTVESWISYTLTANVENLLLLGTANNSATGNTLNNRLTGNS 277
Query: 133 G---LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
G L + G D N + + + +D + + +++
Sbjct: 278 GSNRLDGVTGADTMEGGDGQDVYVVNSADDVVIETNTSTSSLQIDLVEASLSYTLTANVE 337
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+Q + + GN + + G+D + +L I+ +
Sbjct: 338 WLQLMGTTSINATGNT---GDNLLIANVGNNVFDGVSGNDTVSYSLSSPYIASINPKSSI 394
Query: 250 WSSIGGYEKNMTIAQHTV---------------IESVVGSSGNDVVIGNSANNVFFESSG 294
S + ++ I++++GS ND + GNS+ N+ G
Sbjct: 395 NQSANPALAGVKVSLAVTGAQATIGSGMDKLNNIDNLIGSRFNDQLTGNSSANILDGGLG 454
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
DV G G D ++ + + + +++E+L
Sbjct: 455 ADVLIGGDGNDIYYVDGNDTVIET-NASKTQSDTVRSIVSYVLGANLEKLELIGSDNIHG 513
Query: 355 NVK-QRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
++ + L G D E K +
Sbjct: 514 TGNELQNTIIGNDKDNLLDGAGGADRLEGGKGNDTY 549
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/309 (13%), Positives = 83/309 (26%), Gaps = 16/309 (5%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + + IA+ + + G++ +D + G N+ +G D+ G G DT+
Sbjct: 75 SLLLVGDNTTDIAKDELNNPLTGAAQSDFLHGLGGNDTLDGKAGADIMIGGDGADTYIVD 134
Query: 311 APSYLYKIYRFENAIIVYDA--NEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTAS 367
S + +D + ++VE+L I+ +++L ++
Sbjct: 135 NDSDQVNETNASTGLDQWDTVKSSVSYTLGANVEQLNLTGATAINGTGNTLKNVLIGNSA 194
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
L G D E + DS G D + Y
Sbjct: 195 ANRLDGGKGDDRMEGGNGNDTY--------VVDSTKDEVIETSALAAGGVDTVESWISYT 246
Query: 428 THGVKEG--RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
E A + + L G D ++ V
Sbjct: 247 LTANVENLLLLGTANNSATGNTLNNRLTGNSGSNRLDGVTGADTMEGGDGQDVYVVNSAD 306
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE--YIASHEDLINAFADA 543
+ + + + D A+ Y E ++ LI +
Sbjct: 307 DVVIETNTST-SSLQIDLVEASLSYTLTANVEWLQLMGTTSINATGNTGDNLLIANVGNN 365
Query: 544 PDLVQAGKD 552
+G D
Sbjct: 366 VFDGVSGND 374
>gi|220922704|ref|YP_002498006.1| hypothetical protein Mnod_2750 [Methylobacterium nodulans ORS 2060]
gi|219947311|gb|ACL57703.1| hypothetical protein Mnod_2750 [Methylobacterium nodulans ORS 2060]
Length = 736
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 73/206 (35%), Gaps = 42/206 (20%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA--------------- 439
++ FD YL +D+R S + + H++ +G+ EGR+P+A
Sbjct: 119 NVLFDEQWYLERNEDVRAAKASGQVYSGFVHFVLYGLHEGRSPNAMLDLARAERCAGEPV 178
Query: 440 ----FKALEYIASHEDLI-----------NAF----ADAPDLVQVGKDHFSNFGCEEGRF 480
F Y++++ + AF K EE
Sbjct: 179 PAAAFDVASYVSTYPIVEKFLRCFPIIDEAAFYRLYGRDLGHAVREKPVSVQHRFEEFLL 238
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 539
FD Y Y + R A +HY+T G ++G +P F L Y + + D+ A
Sbjct: 239 DQFDCEFYRAQYLNGRAS----DYEALQHYLTVGARDGNSPSKNFDELWYRSFYRDVGEA 294
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSI 565
A + +G H+ G E R
Sbjct: 295 IAA--GEILSGFQHYMMSGKVEQRLP 318
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/225 (20%), Positives = 64/225 (28%), Gaps = 54/225 (24%)
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
Y +P+ F Y+ +ED+ A A G HF +G EGR
Sbjct: 103 PIDAYFADPDCANLSPNVLFDEQWYLERNEDVRAAKASGQVY--SGFVHFVLYGLHEGRS 160
Query: 481 VT--------------------FDSYLYLGSYDDL---RNVFGSDRGAAARHYITHGVK- 516
FD Y+ +Y + F AA Y +G
Sbjct: 161 PNAMLDLARAERCAGEPVPAAAFDVASYVSTYPIVEKFLRCFPIIDEAAF--YRLYGRDL 218
Query: 517 ---------------EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
E D F Y A + +N A H+ G +
Sbjct: 219 GHAVREKPVSVQHRFEEFLLDQFDCEFYRAQY---LNGRASDY----EALQHYLTVGARD 271
Query: 562 GRSI--TFNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGR 603
G S F+ Y + Y D+ + QHY+ G E R
Sbjct: 272 GNSPSKNFDELWYRSFYRDVGEAIAAGEILSGFQHYMMSGKVEQR 316
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 62/173 (35%), Gaps = 43/173 (24%)
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA------------- 523
V FD YL +D+R S + + H++ +G+ EGR+P+A
Sbjct: 117 SPNVLFDEQWYLERNEDVRAAKASGQVYSGFVHFVLYGLHEGRSPNAMLDLARAERCAGE 176
Query: 524 ------FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT----------- 566
F Y++++ + P + +A + +G + G ++
Sbjct: 177 PVPAAAFDVASYVSTYPIVEKFLRCFPIIDEAAF--YRLYGRDLGHAVREKPVSVQHRFE 234
Query: 567 ------FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFK 613
F+ + Y Y + A QHY+T G ++G + + +
Sbjct: 235 EFLLDQFDCEFYRAQYLNGRA----SDYEALQHYLTVGARDGNSPSKNFDELW 283
>gi|13122276|dbj|BAB32879.1| membrane type-5 matrix metalloproteinase-variant [Oryzias latipes]
Length = 431
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 57/211 (27%), Gaps = 55/211 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D Q R A W V L+F+E
Sbjct: 52 LTGQKWREKKISYSISNYTPKVGQKD-------TQRAIRQAFSVWQMVTPLSFQEVPYSE 104
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + D+
Sbjct: 105 IKKEGKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGAGIGGDTHFDSDEPWTLGNPS 164
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + D+ +
Sbjct: 165 SDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYM----DTRDFQLP----------- 209
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
+ D+ +QKIYG P L
Sbjct: 210 ----------LDDLQGIQKIYGVPTAMLEPT 230
>gi|159186153|ref|NP_356242.2| rhizobiocin/RTX toxin [Agrobacterium tumefaciens str. C58]
gi|159141287|gb|AAK89027.2| rhizobiocin/RTX toxin [Agrobacterium tumefaciens str. C58]
Length = 1937
Score = 74.4 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 52/145 (35%), Gaps = 8/145 (5%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ + G+D++D G I E + G N + +
Sbjct: 1767 DMIEGGAGDDRLSAGSGNDMVDA--GSGNDRVI--AGEGDDVVDGGPGNDVLMGGAGNDV 1822
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF----ENAII 326
+ G GND + G S N+ +GNDV G SG DTF + S + F + +
Sbjct: 1823 LYGGDGNDEISGGSGNDTLSGGAGNDVLTGGSGADTFVFATGSGRDVVTDFQAGADGKDV 1882
Query: 327 VYDANEHKQDFLSDVERLRFADQCI 351
V + E D+ + + F D
Sbjct: 1883 VELSKEVFADYRALIASGSFTDGED 1907
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/240 (13%), Positives = 63/240 (26%), Gaps = 14/240 (5%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G + +A T +++ G +GND + G+ +++ G+D +G G D
Sbjct: 1292 GGDDRLDGGAGDDALAGGTGNDALSGGAGNDELWGDDGDDMIAGGLGDDFIEGGRGNDLL 1351
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
S Y+ R + + ++ VE +
Sbjct: 1352 IGGDGSDRYRYGRGDGSDVI-------------VETASASGSVDRLSLYDIDRSEAVLRK 1398
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
Y + + D R ++F + L D ++ + AA
Sbjct: 1399 YGQSVVIELADGETLTLSNQLADGGIER-LSFADGVVLNRGDIVKGLVNRGPVAADDGLA 1457
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+F L DL G G F+
Sbjct: 1458 AVNEDAPSFVISFATLLGNDRDADLDGLTVTGVSAPVGGTAVLEETGIRFTLSADFNGDA 1517
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 36/133 (27%), Gaps = 28/133 (21%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V GS G DV+IG S ++ +G+D SG D A S ++ E +V
Sbjct: 1751 VEGSDGADVLIGTSRKDMIEGGAGDDRLSAGSGNDMV--DAGSGNDRVIAGEGDDVVDGG 1808
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+L A + L G D
Sbjct: 1809 P--------------------------GNDVLMGGAGNDVLYGGDGNDEISGGSGNDTLS 1842
Query: 391 LSEGRDITFDSYL 403
G D+
Sbjct: 1843 GGAGNDVLTGGSG 1855
Score = 39.0 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 13/124 (10%), Positives = 26/124 (20%), Gaps = 5/124 (4%)
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT- 398
+ L + L + + + G D + + G D+
Sbjct: 1756 GADVLIGTSRKDMIEGGAGDDRLSAGSGNDMVDAGSGNDRVIAGEGDDVVDGGPGNDVLM 1815
Query: 399 ----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
D D++ G+D + G + F D
Sbjct: 1816 GGAGNDVLYGGDGNDEISGGSGNDTLSGGAGNDVLTGGSGADTFVFATGSGRDVVTDFQA 1875
Query: 455 AFAD 458
Sbjct: 1876 GADG 1879
>gi|113954144|ref|YP_730341.1| type I secretion target GGXGXDXXX repeat-containing protein
[Synechococcus sp. CC9311]
gi|113881495|gb|ABI46453.1| type I secretion target GGXGXDXXX repeat protein [Synechococcus sp.
CC9311]
Length = 405
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 53/176 (30%), Gaps = 28/176 (15%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ ++ G+ + I + + G GND ++G++ N+ GND DG +G D
Sbjct: 179 GGDGHDTVYGWFGDDQIQGGNGNDMLYGQQGNDGILGDNGNDYIDGGEGNDYLDGGTGND 238
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
F D + D + R IL
Sbjct: 239 LMF----------------------GASGDDRMWG------GDGHDSMYAGEGRDILSGG 270
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ L G DV F S G D+ D + G +L G+
Sbjct: 271 NGNDVLDGGQGNDVLTGGSGADTFVFSGGMDVVKDFNWFEGDRINLAGFQGTVSVK 326
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 63/188 (33%), Gaps = 12/188 (6%)
Query: 204 NNIYKI--EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGG 255
+ +Y + Q + +Y G+D + D G +Y+D T + G
Sbjct: 184 DTVYGWFGDDQIQGGNGNDMLYGQQGNDGILGDNGNDYIDGGEGNDYLDGGTG-NDLMFG 242
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + +S+ G D++ G + N+V GNDV G SG DTF + +
Sbjct: 243 ASGDDRMWGGDGHDSMYAGEGRDILSGGNGNDVLDGGQGNDVLTGGSGADTFVFSGGMDV 302
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
K + + + A V+ A + + K L V
Sbjct: 303 VKDFNWFEGDRINLAGFQGT---VSVKEYVDASGTVHTAVSKSADNFMVFEDKSGLEIVE 359
Query: 376 GQDVFESM 383
G E +
Sbjct: 360 GLKGNEGL 367
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 27/230 (11%), Positives = 57/230 (24%), Gaps = 25/230 (10%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYL 403
+ + ++ + G D + +G D + Y+
Sbjct: 163 GGDDIVHGTRVMDQVSGGDGHDTVYGWFGDDQIQGGNGNDMLYGQQGNDGILGDNGNDYI 222
Query: 404 YLGSYDDLRNVFGSDRGAA-----ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
G +D + + R + G + L ++ L +
Sbjct: 223 DGGEGNDYLDGGTGNDLMFGASGDDRMWGGDGHDSMYAGEGRDILSGGNGNDVLDGGQGN 282
Query: 459 APDLVQVGKDHFSNFGCEE------------GRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
G D F G + F + + Y D + +
Sbjct: 283 DVLTGGSGADTFVFSGGMDVVKDFNWFEGDRINLAGFQGTVSVKEYVDASGTVHTAVSKS 342
Query: 507 ARHYITHGVKEGRN----PDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
A +++ K G + L +AS+ +L P +D
Sbjct: 343 ADNFMVFEDKSGLEIVEGLKGNEGLNVVASNFNLPGTMNSLPQDSSESED 392
>gi|113477710|ref|YP_723771.1| peptidase-like protein [Trichodesmium erythraeum IMS101]
gi|110168758|gb|ABG53298.1| peptidase-like [Trichodesmium erythraeum IMS101]
Length = 1289
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 64/353 (18%), Positives = 110/353 (31%), Gaps = 51/353 (14%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKP---DVLTTHRLSFDITELNPNAQEVARWALGE-WSK 64
+ + D LL W I Y D + D+ E++ QE R L +
Sbjct: 498 SGDYQIDALLSPYKWGTNTITYSFYDNDSGPYYGAERDVGEVSDKVQEDIRHILENIYEP 557
Query: 65 VVDLTFEETSIHSDI-------------------KFISSNNGYVCTPRYDSRYFMEINFD 105
+ DL F E + S+ + N +F
Sbjct: 558 LSDLDFVEVADTSNSYGLIRIMKSSNPNYAYAYYPYADDYNAGNLLDLAGDVHFNVYYDG 617
Query: 106 KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
D + G GT +HE+GHA+GL HP G D+ +VMSY
Sbjct: 618 NGDHNNFQGGPGTHGYMTLIHELGHAVGLKHPHED-------GDTLPENEDNTSNTVMSY 670
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY---KIEVQQKDSPFIQTI 222
+ D+ A+Q IYG + + + + T
Sbjct: 671 NFTYTADN---------LRSYDVNALQYIYGFETPEDSVTVKSPNGGDTLKLGKSYTITW 721
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
D+ +++ GG + I N+ + G+ ++A + + + S + V
Sbjct: 722 DDNFSENVKLELYKGGSFDSIITNSTASDGSYGWTLPTSMAIGSDYKVKITSVSDAGVSD 781
Query: 283 NSANN---------VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
S +N +G DV + D + S +IY ++
Sbjct: 782 LSDSNFTIERDGVITVKSPNGGDVINTGDTYDVTWDDNISENVRIYLYQGNRY 834
>gi|301626287|ref|XP_002942325.1| PREDICTED: matrix metalloproteinase-24-like [Xenopus (Silurana)
tropicalis]
Length = 592
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 47/161 (29%), Gaps = 30/161 (18%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE
Sbjct: 105 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEIPYSE 157
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + D+
Sbjct: 158 IKNERKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNSN 217
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 218 HDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 258
>gi|157278499|ref|NP_001098351.1| membrane type-5 matrix metalloproteinase [Oryzias latipes]
gi|13122278|dbj|BAB32880.1| membrane type-5 matrix metalloproteinase [Oryzias latipes]
Length = 546
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 57/211 (27%), Gaps = 55/211 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D Q R A W V L+F+E
Sbjct: 52 LTGQKWREKKISYSISNYTPKVGQKD-------TQRAIRQAFSVWQMVTPLSFQEVPYSE 104
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + D+
Sbjct: 105 IKKEGKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGAGIGGDTHFDSDEPWTLGNPS 164
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + D+ +
Sbjct: 165 SDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYM----DTRDFQLP----------- 209
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
+ D+ +QKIYG P L
Sbjct: 210 ----------LDDLQGIQKIYGVPTAMLEPT 230
>gi|91213874|ref|YP_543860.1| hemolysin A [Escherichia coli UTI89]
gi|191170766|ref|ZP_03032318.1| RTX C- domain family [Escherichia coli F11]
gi|300974724|ref|ZP_07172713.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 200-1]
gi|91075448|gb|ABE10329.1| hemolysin A [Escherichia coli UTI89]
gi|190908990|gb|EDV68577.1| RTX C- domain family [Escherichia coli F11]
gi|300308857|gb|EFJ63377.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 200-1]
gi|307629393|gb|ADN73697.1| hemolysin A [Escherichia coli UM146]
gi|315290886|gb|EFU50255.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 153-1]
gi|324010974|gb|EGB80193.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 60-1]
Length = 1024
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 57/199 (28%), Gaps = 34/199 (17%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + N + +++ G +G+D + G N+ +GN
Sbjct: 732 FGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGGTGN 791
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D S +V L
Sbjct: 792 NYLNGGDGDDELQVQGNS-----------------------LAKNV--LSGGKGNDKLYG 826
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHF-----YEFGLSEGR----DITFDSYLYLG 406
+ +L+ + L G D++ + + + G + + DI F +
Sbjct: 827 SEGADLLDGGEGNDLLKGGYGNDIYRYLSGYGHHIIDDEGGKDDKLSLADIDFRDVAFKR 886
Query: 407 SYDDLRNVFGSDRGAAARH 425
+DL + H
Sbjct: 887 EGNDLIMYKAEGNVLSIGH 905
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 49/179 (27%), Gaps = 13/179 (7%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T + GS D+ G ++ + GND G G DT + ++Y
Sbjct: 722 LIGTTRADKFFGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLR--GGNGDDQLYGG 779
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDS---VNVKQRSILEYTASYEDLIQVIGQD 378
+ + + L D + N +++L + L G D
Sbjct: 780 DGNDKLIGG--------TGNNYLNGGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGAD 831
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
+ + + G DI Y D A + K N
Sbjct: 832 LLDGGEGNDLLKGGYGNDIYRYLSGYGHHIIDDEGGKDDKLSLADIDFRDVAFKREGND 890
Score = 37.8 bits (86), Expect = 5.2, Method: Composition-based stats.
Identities = 42/249 (16%), Positives = 70/249 (28%), Gaps = 14/249 (5%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------APSYLYKIYRFENAIIV 327
G+D V ++ + + G+DV DT + + Y + R +
Sbjct: 617 GDGDDKVFLSAGSANIYAGKGHDVVYY-DKTDTGYLTIDGTKATEAGNYTVTRVLGGDVK 675
Query: 328 YDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E + E+ ++ +N K + + S E+LI D F K
Sbjct: 676 VLQEVVKEQEVSVGKRTEKTQYRSYEFTHINGKNLTETDNLYSVEELIGTTRADKFFGSK 735
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
F ++G D + Y D N + Y G + L
Sbjct: 736 FTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGGTGNNYLN 795
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
++L V G EG D D L+ +G+D
Sbjct: 796 GGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGA----DLLDGGEGNDLLKGGYGNDIY 851
Query: 505 AAARHYITH 513
Y H
Sbjct: 852 RYLSGYGHH 860
>gi|229515816|ref|ZP_04405275.1| autotransporter adhesin [Vibrio cholerae TMA 21]
gi|229347585|gb|EEO12545.1| autotransporter adhesin [Vibrio cholerae TMA 21]
Length = 2630
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 56/222 (25%), Gaps = 18/222 (8%)
Query: 230 LLDL---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + I+++ +++ G + A + G G+DV +
Sbjct: 2251 TFDFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTS 2310
Query: 287 NVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N+F GND + G G DT A + + + D
Sbjct: 2311 NIFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDT 2369
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
S + + + + + + G D ++ G D+
Sbjct: 2370 GSGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNYNRINAGAGNDV 2429
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 2430 VK-----LMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 2466
Score = 44.0 bits (102), Expect = 0.072, Method: Composition-based stats.
Identities = 37/319 (11%), Positives = 74/319 (23%), Gaps = 70/319 (21%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
DI N + + + + +G + I
Sbjct: 2263 GDGDINISLGNYNF----NWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI------ 2312
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G N + G +N +M D+ + A D +
Sbjct: 2313 FTGGEGNDMGVLMGREN----------MMFGGDGNDTAVVAGRINHVFLGAGDDQS---- 2358
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
++ + + SG + +D +S
Sbjct: 2359 ----------FVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQD-----------YSVTI 2397
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLD 305
G + + +V G+ N +GNDV +G G D
Sbjct: 2398 GNNNQVELGAGNDFANVFGNY-----------NRINAGAGNDVVKLMGYHAVLNGGDGDD 2446
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRS 360
A S + E ++ +DV+ + ID + +
Sbjct: 2447 HLIATAISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNI 2506
Query: 361 ILEYTASYEDLIQVIGQDV 379
+ + + G D+
Sbjct: 2507 VFNGIDWQKLWFERSGYDL 2525
>gi|67924980|ref|ZP_00518366.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
gi|67853176|gb|EAM48549.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
Length = 1989
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 55/224 (24%), Gaps = 8/224 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I Y+ TI + + + G G+D +IG ++ GNDV G DT
Sbjct: 326 TIKAYDGRDTIQGGSNDDDLQGGRGDDTIIGGEGHDTIGGDEGNDVLVGG---DTVEEDN 382
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER---LRFADQCIDSVNVKQRSILEYTASY 368
+ I + +D L + LR D +
Sbjct: 383 ITGNDSITGGTGNDTLIGG--AGEDTLKGDDDNDVLRGGDDKDKLYGGDGEDNIYGEGGN 440
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ D E + G D + N Y
Sbjct: 441 DTASGGGQNDYIEGGEGDDSLNGDGGEDYILGQGGEDTLNGGIDNDQLDGGDDDDHLYGD 500
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
G + + L ++ L + G D
Sbjct: 501 SGNDFLQGGEDNDHLYGGDDNDVLEGGLGNDEVSGGSGDDDLYG 544
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/306 (16%), Positives = 76/306 (24%), Gaps = 26/306 (8%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
D + G G TI+ +G G DN N
Sbjct: 331 DGRDTIQGGSNDDDLQGGRGDDTIIGGEGHD----TIGGDEGNDVLVGGDTVEEDNITGN 386
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK--IEVQQ 213
DS + + + D G ++ K+YG +NIY
Sbjct: 387 DSITGGTGNDTLIGGAGEDTLKGDDDNDVLRGGDDKDKLYGGDG---EDNIYGEGGNDTA 443
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
I GDD +L G L ++ G N + + + G
Sbjct: 444 SGGGQNDYIEGGEGDD----SLNGDGGEDYILGQGGEDTLNGGIDNDQLDGGDDDDHLYG 499
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR----FENAIIVYD 329
SGND + G N+ + NDV +G G D S +Y
Sbjct: 500 DSGNDFLQGGEDNDHLYGGDDNDVLEGGLGNDEV--SGGSGDDDLYGDNQDATGNGWDVL 557
Query: 330 ANEHKQDFLSDVERLRFADQ---CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D+L D IL + + D+
Sbjct: 558 KGGKGDDYLKGGGGNDNLDGNEDADLLEGDDGDDILRGGKNDDT----DANDILRGGDGE 613
Query: 387 YEFGLS 392
E
Sbjct: 614 DELYGG 619
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 30/219 (13%), Positives = 53/219 (24%), Gaps = 14/219 (6%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
D + R ++ ++ +DL G D + G EG D+
Sbjct: 322 DTPVTIKAYDGRDTIQGGSNDDDLQGGRGDDTIIGGEGHDTIGGDEGNDVLVGGDTVEED 381
Query: 408 ----YDDLRNVFGSD---RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
D + G+D GA + K Y ED I
Sbjct: 382 NITGNDSITGGTGNDTLIGGAGEDTLKGDDDNDVLRGGDDKDKLYGGDGEDNIYGEGGND 441
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS-------YDDLRNVFGSDRGAAARHYITH 513
G++ + G + Y+ + N Y
Sbjct: 442 TASGGGQNDYIEGGEGDDSLNGDGGEDYILGQGGEDTLNGGIDNDQLDGGDDDDHLYGDS 501
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G + + L ++ L + +G D
Sbjct: 502 GNDFLQGGEDNDHLYGGDDNDVLEGGLGNDEVSGGSGDD 540
Score = 42.9 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 58/233 (24%), Gaps = 24/233 (10%)
Query: 288 VFFESSGND------------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
V ++ +D G DT S + + H
Sbjct: 305 VINGTNYDDKIIVDKLVDTPVTIKAYDGRDTI--QGGSNDDDLQGGRGDDTIIGGEGHDT 362
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ + ++ N+ + + LI G+D + + +
Sbjct: 363 IGGDEGNDVLVGGDTVEEDNITGNDSITGGTGNDTLIGGAGEDTLKGDDDNDVLRGGDDK 422
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
D LY G +D G + A+ G + ED I
Sbjct: 423 D-----KLYGGDGEDNIYGEGGNDTAS-----GGGQNDYIEGGEGDDSLNGDGGEDYILG 472
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
L + + G ++ +L +D +++G D
Sbjct: 473 QGGEDTLNGGIDNDQLDGGDDDDHLYGDSGNDFLQGGEDNDHLYGGDDNDVLE 525
>gi|149203011|ref|ZP_01879982.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
gi|149143557|gb|EDM31593.1| rhizobiocin/RTX toxin [Roseovarius sp. TM1035]
Length = 844
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 50/315 (15%), Positives = 80/315 (25%), Gaps = 16/315 (5%)
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--IVA 190
GL G V D+ ++ + S F D I A
Sbjct: 485 GLGDDTIDGEGGTDTAVLAVARADTQVSVINGGIRIISSEGTDFFTSVEFFQFDDTLISA 544
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG------VKNYID 244
I G + + T+ G+D +D G N
Sbjct: 545 ADLINGTGITGEVIVGTDGDDSLIGTVNDDTLAGGDGNDNIDSGGGGNNNISGSDGNDTL 604
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
SIGG + TI + + + GND V G + N+V +G+D +G G
Sbjct: 605 FGGPGDDSIGGGLGDDTIFGNGGNDVLGAGFGNDFVSGGNGNDVVAGGAGDDTLEGGDGN 664
Query: 305 DT--------FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
D+ + I A + + D
Sbjct: 665 DSMSGSFGNDLIFGNGGADDIGGGTGRDTIDAGAGNDSVGGGEGDDSISGGDGNDFLAGG 724
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ I++ A + + G D +F S D D D +
Sbjct: 725 GRNDIIDGGAGNDTINAGAGNDTITGGTGADQFVFSSFFDGEADVITDFEDGLDSFFIRR 784
Query: 417 SDRGAAARHYITHGV 431
D + G
Sbjct: 785 VDPDTGETNITNGGN 799
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 71/548 (12%), Positives = 135/548 (24%), Gaps = 83/548 (15%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S + + F +G+ + + D A + KG L L
Sbjct: 242 SGNDTVDFGGLVDGFAEVSYGNLASAITATIDGA-ANTGTVDKGAQGFDTLLDVENPMLS 300
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG-----YCATPMVSDI 188
G ++ S F D+ G + T + +D+
Sbjct: 301 GFANGGLRIRGTSGDDVFNFNTASNQWISARGFGGSDTYNLTGAGLVQLDFRGTAVTADL 360
Query: 189 VAVQKIYGAPKGSLGNNIYKI--------------EVQQKDSPFIQTIYDSGGDDLLDLT 234
VA G ++ ++++ + + T+ G D L
Sbjct: 361 VAGSITQGGNTSTVNGTVFELRTGNEADSVTGGTADESFRVGGGNDTVDGGAGFDRLRYD 420
Query: 235 LIGGVKNYIDLNTE-------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
G +L T + + T + ++G + + + G ++
Sbjct: 421 DFGVTAVNANLATGIVTGTANGVAFTDTISNIEWLRGSTGNDILIGDATANRLQGRDGDD 480
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF- 346
G+D DG G DT ++ I + + DF + VE +F
Sbjct: 481 RLVGGLGDDTIDGEGGTDTAVLAVARADTQVSVINGGIRII--SSEGTDFFTSVEFFQFD 538
Query: 347 ----------------------ADQCIDSVNVKQRSILEYTASYEDLIQVI--------- 375
D + L +++
Sbjct: 539 DTLISAADLINGTGITGEVIVGTDGDDSLIGTVNDDTLAGGDGNDNIDSGGGGNNNISGS 598
Query: 376 -GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D G G D F + G D L FG+D + +G
Sbjct: 599 DGNDTLFGGPGDDSIGGGLGDDTIFGN----GGNDVLGAGFGNDFVS-----GGNGNDVV 649
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
LE ++ + +F + G D + + G D
Sbjct: 650 AGGAGDDTLEGGDGNDSMSGSFGNDLIFGNGGADDIGGGTGRDTIDAGAGNDSVGGGEGD 709
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
G A ++ A ++ + + G D F
Sbjct: 710 DSISGGDGNDFLA------------GGGRNDIIDGGAGNDTINAGAGNDTITGGTGADQF 757
Query: 555 SNFGYEEG 562
+ +G
Sbjct: 758 VFSSFFDG 765
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 73/274 (26%), Gaps = 25/274 (9%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV-------- 271
+D DL G+ + + T+ S+ G + T+A +++
Sbjct: 534 FFQFDDTLISAADLINGTGITGEVIVGTDGDDSLIGTVNDDTLAGGDGNDNIDSGGGGNN 593
Query: 272 --VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
GS GND + G ++ G+D G+ G D A + +V
Sbjct: 594 NISGSDGNDTLFGGPGDDSIGGGLGDDTIFGNGGND--VLGAGFGNDFVSGGNGNDVVAG 651
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
L D ++ +D+ G+D ++
Sbjct: 652 GAGDDT--------LEGGDGNDSMSGSFGNDLIFGNGGADDIGGGTGRDTIDAGAGNDSV 703
Query: 390 GLSEGRDIT-----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G EG D D G D + G+D A T G + F +
Sbjct: 704 GGGEGDDSISGGDGNDFLAGGGRNDIIDGGAGNDTINAGAGNDTITGGTGADQFVFSSFF 763
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ ++ G
Sbjct: 764 DGEADVITDFEDGLDSFFIRRVDPDTGETNITNG 797
Score = 47.1 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 46/377 (12%), Positives = 89/377 (23%), Gaps = 29/377 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI------GGY 256
G++ + + +GG + + G
Sbjct: 115 GDDTVILPTSVAGFNALDASITNGGQVTFGPFAPNQNIQLTSFENTTSELLPDGELFTGT 174
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N T+ T +++ G G+DV+ G N+ +GND G +G D + +
Sbjct: 175 NGNDTLLGGTGNDTLNGLDGDDVLDGAGGNDTLDGGAGNDQLIGGAGSDLIRTGENNPDF 234
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFAD------------QCIDSVNVKQRSILEY 364
+ + D ++V A +D ++L+
Sbjct: 235 GDFVVGGSGNDTVDFGGLVDGFAEVSYGNLASAITATIDGAANTGTVDKGAQGFDTLLDV 294
Query: 365 TASYEDLIQ-VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
L G F + + + + GS G +
Sbjct: 295 --ENPMLSGFANGGLRIRGTSGDDVFNFNTASNQWISARGFGGSDTYNLTGAGLVQLDFR 352
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT- 482
+T + G + +L + F G +
Sbjct: 353 GTAVTADLVAGSITQGGNTSTVNGTVFELRTGNEADSVTGGTADESFRVGGGNDTVDGGA 412
Query: 483 ------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE-GRNPDAFKALEYIASHED 535
+D + +L + T E R L A+
Sbjct: 413 GFDRLRYDDFGVTAVNANLATGIVTGTANGVAFTDTISNIEWLRGSTGNDILIGDATANR 472
Query: 536 LINAFADAPDLVQAGKD 552
L D + G D
Sbjct: 473 LQGRDGDDRLVGGLGDD 489
>gi|209527106|ref|ZP_03275620.1| Na-Ca exchanger/integrin-beta4 [Arthrospira maxima CS-328]
gi|209492446|gb|EDZ92787.1| Na-Ca exchanger/integrin-beta4 [Arthrospira maxima CS-328]
Length = 1152
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 50/181 (27%), Gaps = 19/181 (10%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
++ + L TE I + TI + + G+ GND + GN N+ +
Sbjct: 49 ISSEPTDNSDFILGTEFDDIIFALGGDDTIYGLDGDDILGGNEGNDFLHGNQGNDTLYGG 108
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
G+D G G D + ++ + ++
Sbjct: 109 QGDDTLRGGKGND--VLFGDLGDDLLFGDRDNDTLFGNQ-----------------GNDT 149
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
+ +L + L G D + EG + + G D
Sbjct: 150 LYGGQGDDLLYGGQGDDLLFGDRGNDTLIGDQGSDTLTGGEGNNWFYLGLNTGGFTPDRS 209
Query: 413 N 413
N
Sbjct: 210 N 210
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 13/140 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ F I+ GGDD + G + I E + G + N T+ +
Sbjct: 57 SDFILGTEFDDIIFALGGDDTI----YGLDGDDILGGNEGNDFLHGNQGNDTLYGGQGDD 112
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFE 322
++ G GNDV+ G+ +++ F ND G+ G DT + Y ++
Sbjct: 113 TLRGGKGNDVLFGDLGDDLLFGDRDNDTLFGNQGNDTLYGGQGDDLLYGGQGDDLLFGDR 172
Query: 323 NAIIVYDANEHKQDFLSDVE 342
+ + D L+ E
Sbjct: 173 GNDTLI--GDQGSDTLTGGE 190
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 40/109 (36%), Gaps = 4/109 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T+ G+D+L G + + + ++ G + N T+
Sbjct: 101 GNDTLYGGQGDDTLRGGKGNDVL----FGDLGDDLLFGDRDNDTLFGNQGNDTLYGGQGD 156
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + G G+D++ G+ N+ G+D G G + F+ + +
Sbjct: 157 DLLYGGQGDDLLFGDRGNDTLIGDQGSDTLTGGEGNNWFYLGLNTGGFT 205
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 16/165 (9%), Positives = 37/165 (22%)
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
P + +N+I V + + + + + + + + + L
Sbjct: 28 PISTATGIQAQNSITVLTNGQISSEPTDNSDFILGTEFDDIIFALGGDDTIYGLDGDDIL 87
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D + +G D + DL + + G
Sbjct: 88 GGNEGNDFLHGNQGNDTLYGGQGDDTLRGGKGNDVLFGDLGDDLLFGDRDNDTLFGNQGN 147
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
L + L + + G D +
Sbjct: 148 DTLYGGQGDDLLYGGQGDDLLFGDRGNDTLIGDQGSDTLTGGEGN 192
>gi|119485713|ref|ZP_01619988.1| hypothetical protein L8106_25060 [Lyngbya sp. PCC 8106]
gi|119457038|gb|EAW38165.1| hypothetical protein L8106_25060 [Lyngbya sp. PCC 8106]
Length = 483
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 67/268 (25%), Gaps = 12/268 (4%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ TI G+D L G + S+ G N +
Sbjct: 109 TFLTNNDLIRGGTGKDTILGEQGNDRL----YGDSGDDRIFGGTGDDSVYGGVGNDVLVG 164
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYK 317
++ + + G G+D + G S N+ F GND+ DG SG D
Sbjct: 165 NSGDDEIFGGDGDDNISGVSGNDNIFAGDGNDIADGGSGDDVVRGEAGYDLLSGGLGSDF 224
Query: 318 IYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ EN + ++ D S + L + L + L G
Sbjct: 225 LSGGENNDRLLGQQDNDTLDGGSGNDELLGGEGDDSISGGIGNDSLSGDLGNDTLEGDWG 284
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + +G D + + F G
Sbjct: 285 DDFLTGDEGNDSLNGGDGDDSLNGGDGEDLLNGSVGDDFLDGGDDDDLLNGGDGSDILTG 344
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQ 464
+ L ++ LI
Sbjct: 345 GSGYDILNGGLGNDSLIAGGGSDRISFT 372
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/321 (15%), Positives = 79/321 (24%), Gaps = 13/321 (4%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTI---YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ N + F T+ +D + + GG L + + G
Sbjct: 78 NTTSQNTTVNNSFTPVVAEFSPTLNVRFDDFTFLTNNDLIRGGTGKDTILGEQGNDRLYG 137
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ I T +SV G GNDV++GNS ++ F G+D G SG D F +
Sbjct: 138 DSGDDRIFGGTGDDSVYGGVGNDVLVGNSGDDEIFGGDGDDNISGVSGNDNIF----AGD 193
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ E D LS + L + L
Sbjct: 194 GNDIADGGSGDDVVRGEAGYDLLSG------GLGSDFLSGGENNDRLLGQQDNDTLDGGS 247
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D + G D D + F + G
Sbjct: 248 GNDELLGGEGDDSISGGIGNDSLSGDLGNDTLEGDWGDDFLTGDEGNDSLNGGDGDDSLN 307
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
D L + L D G D + + + +
Sbjct: 308 GGDGEDLLNGSVGDDFLDGGDDDDLLNGGDGSDILTGGSGYDILNGGLGNDSLIAGGGSD 367
Query: 496 RNVFGSDRGAAARHYITHGVK 516
R F + + G
Sbjct: 368 RISFTFSEMNQEAEFESFGND 388
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 79/284 (27%), Gaps = 8/284 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +GND + GN+ N+ F G D +G+SG D + + I
Sbjct: 20 DRIRGLNGNDQLFGNAGNDEVFGGLGADTIEGNSGNDRLLGDSEGSQFG----GPGNITL 75
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
N Q+ + + ++NV+ + + + + G+D +
Sbjct: 76 GLNTTSQNTTVNNSFTPVVAEFSPTLNVRFDD-FTFLTNNDLIRGGTGKDTILGEQGNDR 134
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G D F Y + N + G +
Sbjct: 135 LYGDSGDDRIFGGTGDDSVYGGVGNDVLVGNSGDDEIFGGDGDDNISGVSGNDNIFAGDG 194
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
++ D + G D S + ++ LG D+ GS
Sbjct: 195 NDIADGGSGDDVVRGEAGYDLLSGGLGSDFLSGGENNDRLLGQQDNDTLDGGSGNDELLG 254
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G +L ++ L + D G D
Sbjct: 255 GEGDDSISGG---IGNDSLSGDLGNDTLEGDWGDDFLTGDEGND 295
Score = 40.9 bits (94), Expect = 0.79, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 61/249 (24%), Gaps = 9/249 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + DV G I + I G
Sbjct: 128 GEQGNDRLYGDSGDDRIFGGTGDDSVYGGVGNDVLVGNSGDDEIFGGDGDDNISGVSGND 187
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ + +G G D + + D +
Sbjct: 188 NIFAGDGNDIADGGSGDDVVRGEAGYDLLSGGLGSDFLSGGENNDRLLGQQDNDTLDGGS 247
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESW 250
G + G + + ++ G+D L D L G N +
Sbjct: 248 GNDELLGG----EGDDSISGGIGNDSLSGDLGNDTLEGDWGDDFLTGDEGNDSLNGGDGD 303
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S+ G + + + + G +D++ G +++ SG D+ +G G D+
Sbjct: 304 DSLNGGDGEDLLNGSVGDDFLDGGDDDDLLNGGDGSDILTGGSGYDILNGGLGNDSLIAG 363
Query: 311 APSYLYKIY 319
S
Sbjct: 364 GGSDRISFT 372
>gi|126462926|ref|YP_001044040.1| glycoside hydrolase family protein [Rhodobacter sphaeroides ATCC
17029]
gi|126104590|gb|ABN77268.1| glycoside hydrolase, family 16 [Rhodobacter sphaeroides ATCC 17029]
Length = 475
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 54/210 (25%), Gaps = 8/210 (3%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ T+ + + G+SG D++ G N+ D G +G DT+
Sbjct: 220 LPSDSTVFGKGGADDLRGTSGEDLLYGFGGNDTLRGGGAADRMIGGTGNDTYIVDH--AG 277
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
++ + + VERL I+ ++L + L
Sbjct: 278 DEVVERAGEGLDRVCASVSHQLAAHVERLMLTGTAAINGAGNGLANVLWGNGAANRLSGG 337
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
G D E G D D D L G+DR
Sbjct: 338 GGNDRLEGRDGSDVLNGGTGHDTLIGGAGHDRLAGGTGSDRLVGGSGNDRLDGGIDRDVL 397
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADA 459
G + F A D
Sbjct: 398 TGGAGADTFVFAAGYGRDVITDFRVGNGGD 427
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 2/120 (1%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ G + + + + G N + + + G +G+D +IG + ++
Sbjct: 311 TAAINGAGNGLANVLWGNGAANRLSGGGGNDRLEGRDGSDVLNGGTGHDTLIGGAGHDRL 370
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G+D G SG D + A A + +D ++D D+
Sbjct: 371 AGGTGSDRLVGGSGNDRL--DGGIDRDVLTGGAGADTFVFAAGYGRDVITDFRVGNGGDR 428
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 4/113 (3%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ ++ +G + L GG + ++ S + G + T+ + +
Sbjct: 315 NGAGNGLANVLWGNGAANRL---SGGGGNDRLEGRDGS-DVLNGGTGHDTLIGGAGHDRL 370
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G +G+D ++G S N+ DV G +G DTF + A I F
Sbjct: 371 AGGTGSDRLVGGSGNDRLDGGIDRDVLTGGAGADTFVFAAGYGRDVITDFRVG 423
>gi|254454453|ref|ZP_05067890.1| hypothetical protein OA238_5083 [Octadecabacter antarcticus 238]
gi|198268859|gb|EDY93129.1| hypothetical protein OA238_5083 [Octadecabacter antarcticus 238]
Length = 572
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 57/199 (28%), Gaps = 16/199 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ GG+D L G + + + G N + +
Sbjct: 370 SDSIDGGQGADNLSGGGGNDTL----YGLGGDDQLNGGLGFDDMYGGSGNDVMIGLNGFD 425
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G SG+D + GN+ N+ F G D+ +G G D + I A I+Y
Sbjct: 426 TLYGGSGDDNLKGNAGNDTLFGGDGADILNGGQGAD--VMHGDGDNDTIIGLGGADILYG 483
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVK----------QRSILEYTASYEDLIQVIGQDV 379
+ + D D + ++ ++ L IG D
Sbjct: 484 GTGDDNLSGNAANDTVYGDGGNDVIQGGQGADDLFGGDGDDVISGADGFDTLFGGIGDDE 543
Query: 380 FESMKHFYEFGLSEGRDIT 398
G D+
Sbjct: 544 LNGNAGNDFINGGLGDDLL 562
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 55/193 (28%), Gaps = 22/193 (11%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
T+Y GGDD L+ + GG N + + + ++ G + + +
Sbjct: 380 DNLSGGGGNDTLYGLGGDDQLNGGLGFDDMYGGSGNDVMIGLNGFDTLYGGSGDDNLKGN 439
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKI 318
+++ G G D++ G +V ND G G D + + +
Sbjct: 440 AGNDTLFGGDGADILNGGQGADVMHGDGDNDTIIGLGGADILYGGTGDDNLSGNAANDTV 499
Query: 319 YRFENAIIVYDANEHKQDF----------LSDVERLRFADQCIDSVNVKQRSILEYTASY 368
Y ++ F + L + +
Sbjct: 500 YGDGGNDVIQGGQGADDLFGGDGDDVISGADGFDTLFGGIGDDELNGNAGNDFINGGLGD 559
Query: 369 EDLIQVIGQDVFE 381
+ L G D FE
Sbjct: 560 DLLRGGTGADTFE 572
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 71/245 (28%), Gaps = 22/245 (8%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
S D+ E + + D G +
Sbjct: 349 SAASDVVVTEVPG-----ITVAGVRSSDSIDGGQGADNLSGGGGNDTLYGLGGDDQLNGG 403
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
++ G NG +YG D + + +++ G
Sbjct: 404 LGFDDMYGGSGNDVMIGLNGFDTLYGGSGDDNLKGNAGNDTLFGGDGADILNGGQGADVM 463
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
D + + GA G + + T+Y GG+D++
Sbjct: 464 HGDGDNDTIIGLGGADILYGG----TGDDNLSGNAANDTVYGDGGNDVIQ---------- 509
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + G + + I+ +++ G G+D + GN+ N+ G+D+ G +
Sbjct: 510 ---GGQGADDLFGGDGDDVISGADGFDTLFGGIGDDELNGNAGNDFINGGLGDDLLRGGT 566
Query: 303 GLDTF 307
G DTF
Sbjct: 567 GADTF 571
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 32/249 (12%), Positives = 62/249 (24%), Gaps = 8/249 (3%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+T + I S + + +D G G +
Sbjct: 331 ITAVASYIDGKGTPESVTSAASDVVVTEVPGITVAGVRSSDSIDGGQGADNLSGGGGNDT 390
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ + LG + G+ + + L + + T D
Sbjct: 391 L-YGLGGDDQLNGGLGFDDMYGGSGNDVMIGLNGFDTLYGGSGDDNLKGNAGNDTLFGGD 449
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ G+ +Y GDD L G N
Sbjct: 450 GADILNGGQGADVMHGD---GDNDTIIGLGGADILYGGTGDDNL----SGNAANDTVYGD 502
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
I G + + + + G+ G D + G ++ ++GND +G G D
Sbjct: 503 GGNDVIQGGQGADDLFGGDGDDVISGADGFDTLFGGIGDDELNGNAGNDFINGGLGDDLL 562
Query: 308 FYYAPSYLY 316
+ +
Sbjct: 563 RGGTGADTF 571
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 22/247 (8%), Positives = 44/247 (17%), Gaps = 12/247 (4%)
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + + ++V + + + + + L
Sbjct: 337 YIDGKGTPESVTSAASDVVVTEVPGITVAGVRSSDSIDGGQGADNLSGGGGNDTLYGLGG 396
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ L +G D G D + + N A
Sbjct: 397 DDQLNGGLGFDDMYGGSGNDVMIGLNGFDTLYGGSGDDNLKGNAGNDTLFGGDGADILNG 456
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
G + + + L D D G + +
Sbjct: 457 GQGADVMHGDGDNDTIIGLGGADILYGGTGDDNLSGNAANDTVYGDGGNDVIQGGQGADD 516
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
G D L A ++ + D
Sbjct: 517 LFGGDGDDVISGADGFDTLFGGIGD------------DELNGNAGNDFINGGLGDDLLRG 564
Query: 548 QAGKDHF 554
G D F
Sbjct: 565 GTGADTF 571
>gi|149204680|ref|ZP_01881645.1| probable aggregation factor core protein MAFp3, isoform C
[Roseovarius sp. TM1035]
gi|149141939|gb|EDM29989.1| probable aggregation factor core protein MAFp3, isoform C
[Roseovarius sp. TM1035]
Length = 1330
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 69/247 (27%), Gaps = 30/247 (12%)
Query: 196 GAPKGSLGNN------IYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYID 244
G G + S + GDD + + TLIGGV N +
Sbjct: 1058 GGNDTIAGGDGNDSIEAGGGNDNVSASEGNDFVDAGAGDDSVGGGVDNDTLIGGVGNDVM 1117
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ G N +A +++ G GND + G+ N++ F + G D G +G
Sbjct: 1118 GGGFGDDFMSGGAGNDVVAGGAGDDTLEGGEGNDSMSGSFGNDLIFGNGGADDIGGGTGR 1177
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT A D +S D + +++
Sbjct: 1178 DTI-------------DAGAGNDSVGGGEGDDSISG------GDGNDFLAGGGRNDVVDG 1218
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
A + + G D +F S D D D + D
Sbjct: 1219 GAGNDTINAGAGNDTITGGTGADQFVFSSFFDGEADVVTDFEDGLDSFFIRRVDPDTGET 1278
Query: 425 HYITHGV 431
+ G
Sbjct: 1279 NITNGGN 1285
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 45/250 (18%), Positives = 69/250 (27%), Gaps = 39/250 (15%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
T+ GG+D + + SI N ++ + V +G+D
Sbjct: 1051 NDTLIGGGGNDTIA-------------GGDGNDSIEAGGGNDNVSASEGNDFVDAGAGDD 1097
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V G N+ GNDV G G D + A A D L
Sbjct: 1098 SVGGGVDNDTLIGGVGNDVMGGGFGDD-------------FMSGGAGNDVVAGGAGDDTL 1144
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
E ++ +D+ G+D ++ G EG D
Sbjct: 1145 EGGE------GNDSMSGSFGNDLIFGNGGADDIGGGTGRDTIDAGAGNDSVGGGEGDDSI 1198
Query: 399 -----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
D G D + G+D A + G D F + D++
Sbjct: 1199 SGGDGNDFLAGGGRNDVVDGGAGNDTINA--GAGNDTITGGTGADQFVFSSFFDGEADVV 1256
Query: 454 NAFADAPDLV 463
F D D
Sbjct: 1257 TDFEDGLDSF 1266
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 67/211 (31%), Gaps = 16/211 (7%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
G + NDS + + D V V + G +
Sbjct: 1057 GGGNDTIAGGDGNDSIEAGGGNDNVSASEGNDFVDAGAGDDSVGGGVDNDTLIGG----V 1112
Query: 203 GNNIYKI---EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIG 254
GN++ + + GDD L + ++ G N + IG
Sbjct: 1113 GNDVMGGGFGDDFMSGGAGNDVVAGGAGDDTLEGGEGNDSMSGSFGNDLIFGNGGADDIG 1172
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G TI +SV G G+D + G N+ NDV DG +G DT A +
Sbjct: 1173 GGTGRDTIDAGAGNDSVGGGEGDDSISGGDGNDFLAGGGRNDVVDGGAGNDTI--NAGAG 1230
Query: 315 LYKIYRFENAIIVYDAN--EHKQDFLSDVER 343
I A ++ + + D ++D E
Sbjct: 1231 NDTITGGTGADQFVFSSFFDGEADVVTDFED 1261
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/264 (11%), Positives = 63/264 (23%), Gaps = 21/264 (7%)
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
DG+ +T + +IV + L + L
Sbjct: 1009 DGNGANETLLSQGSLVAPRPGTSAGELIVGGPLGSLLEGLGGNDTLIGGGGNDTIAGGDG 1068
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+E +++ G D ++ G + D+ + D + FG D
Sbjct: 1069 NDSIEAGGGNDNVSASEGNDFVDAGAGDDSVGGG----VDNDTLIGGVGNDVMGGGFGDD 1124
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ G LE ++ + +F + G D +
Sbjct: 1125 FMS-----GGAGNDVVAGGAGDDTLEGGEGNDSMSGSFGNDLIFGNGGADDIGGGTGRDT 1179
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
+ G D G A ++ A ++ +
Sbjct: 1180 IDAGAGNDSVGGGEGDDSISGGDGNDFLA------------GGGRNDVVDGGAGNDTINA 1227
Query: 539 AFADAPDLVQAGKDHFSNFGYEEG 562
+ G D F + +G
Sbjct: 1228 GAGNDTITGGTGADQFVFSSFFDG 1251
>gi|300868949|ref|ZP_07113553.1| hypothetical protein OSCI_3880006 [Oscillatoria sp. PCC 6506]
gi|300333016|emb|CBN58745.1| hypothetical protein OSCI_3880006 [Oscillatoria sp. PCC 6506]
Length = 1224
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 73/247 (29%), Gaps = 21/247 (8%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ + T+ G V + T + +I N + + +++ GS+GNDV+ GN +
Sbjct: 922 NPVQNTIEGTVGDETLTGTTANDAINAGSGNDVVYGFSSNDNLSGSNGNDVLFGNEGTDY 981
Query: 289 FFESSGNDVFD---------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
GND G G D F ++ ++ ++
Sbjct: 982 LDAGIGNDTVYAGKDNDVAIGGGGND--FLRGDLGNDTVFGGAGTQTIFGGKDNDILLGE 1039
Query: 340 DVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
D + L + + ++ + + D + K EG D+
Sbjct: 1040 DDDDLIYGNLGDDTIDGGNGNDLVFANEGADLIFGGSDNDTVYAGKDNDTLCGGEGSDLL 1099
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
F + + DD + D Y G L ++ LI +
Sbjct: 1100 FGN-----NNDDAVDGSAGDDTV----YGGKGNDSVYGCTGNDTLSGDLGNDTLIGGSGN 1150
Query: 459 APDLVQV 465
+
Sbjct: 1151 DVFIFSP 1157
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/243 (13%), Positives = 59/243 (24%), Gaps = 8/243 (3%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ S + F D G + + + +G +
Sbjct: 936 TLTGTTANDAINAGSGNDVVYGFSSNDNLSGSNGNDVLFGNEGTDYLDAGIGNDTVYAGK 995
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G + + F + + D +
Sbjct: 996 DNDVAIGGGGNDFL-RGDLGNDTVFGGAGTQTIFGGKDNDILLGEDDDDLIYGNLGDDTI 1054
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G N + I+ +D + G N E + G +
Sbjct: 1055 DGGN---GNDLVFANEGADLIFGGSDNDTV----YAGKDNDTLCGGEGSDLLFGNNNDDA 1107
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ ++V G GND V G + N+ GND G SG D F + I F
Sbjct: 1108 VDGSAGDDTVYGGKGNDSVYGCTGNDTLSGDLGNDTLIGGSGNDVFIFSPDQGNDVITDF 1167
Query: 322 ENA 324
+
Sbjct: 1168 QKG 1170
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/225 (13%), Positives = 59/225 (26%), Gaps = 10/225 (4%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
E L ++ +S ++L G DV + G D
Sbjct: 932 VGDETLTGTTANDAINAGSGNDVVYGFSSNDNLSGSNGNDVLFGNEGTDYLDAGIGNDTV 991
Query: 399 F-----DSYLYLGSYDDLRNVFGSDRG---AAARHYITHGVKEGRNPDAFKALEYIASHE 450
+ D + G D LR G+D A + + + L Y +
Sbjct: 992 YAGKDNDVAIGGGGNDFLRGDLGNDTVFGGAGTQTIFGGKDNDILLGEDDDDLIYGNLGD 1051
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
D I+ + G + L + +FG++ A
Sbjct: 1052 DTIDGGNGNDLVFANEGADLIFGGSDNDTVYAGKDNDTLCGGEGSDLLFGNNNDDAVD-- 1109
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ G ++ ++ L + + +G D F
Sbjct: 1110 GSAGDDTVYGGKGNDSVYGCTGNDTLSGDLGNDTLIGGSGNDVFI 1154
>gi|294676900|ref|YP_003577515.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294475720|gb|ADE85108.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 607
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 59/488 (12%), Positives = 115/488 (23%), Gaps = 51/488 (10%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
++ + D G T+ + I LG G
Sbjct: 69 DQIFGEAGNDTIVAGAGRDTINGGADSDTVDYSRSEAAITVNLG-------------SGA 115
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ + + D G + + +I G L +
Sbjct: 116 AQSGGLAAGDRLISIENVTASGFGDQLIGSGVANRLLGLGGNDRISGLGGNDLIDGG-SG 174
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ G+D L G + ++ G N +A T +
Sbjct: 175 NDTILGGTENDGLTGGSGNDRL----FGESGADTLSGGDGTDALSGGTGNDQLAGGTGND 230
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +D++ G++ N+ +GND DG SG D + + ++ +
Sbjct: 231 QLAGGENDDLLSGDAGNDALSGGAGNDTVDGGSGNDVVQLESRTEADRLEGGAGIDTLSF 290
Query: 330 ANE----------HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
A+ + D +S + + + A L G D
Sbjct: 291 ASLPAVFLPPGVFNGIDLVSGRSFATSYHGFENVLGSSGADAISGDALSNRLEGGAGGDR 350
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ G D S + S A R G
Sbjct: 351 IDGRAGADVLVGGSGADTLAGSAGADTLFGGSEGDRLSGGTEADRLEGEAGADRVSGDAG 410
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
++ ++ L + G D + D +
Sbjct: 411 HDSVFGGLDNDTLSGGTGNDLLSGGSGAD---------------------LARGDAGDDR 449
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
G A + G + L+ + ++ L + G D + G
Sbjct: 450 VFGDGGADALFGDAGADQLSGGTDNDRLDGGSENDLLRGEDGADVLIGGTGAD--TMEGG 507
Query: 560 EEGRSITF 567
+ F
Sbjct: 508 AGADTFVF 515
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/395 (14%), Positives = 104/395 (26%), Gaps = 11/395 (2%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+G D+ G G TIL + G +G
Sbjct: 144 GSGVANRLLGLGGNDRISGLGGNDLIDGGSGNDTILGGTENDGLTGGSGNDRLFGESGAD 203
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ G D D+ + + + D G ++S + G +
Sbjct: 204 TLSGGDGT---DALSGGTGNDQLAGGTGNDQLAGGENDDLLSGDAGNDALSGGAGNDTVD 260
Query: 205 NIYKIEVQQ-KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+V Q + + G D L + + L ++ I
Sbjct: 261 GGSGNDVVQLESRTEADRLEGGAGIDTLSFASLPA----VFLPPGVFNGIDLVSGRSFAT 316
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ E+V+GSSG D + G++ +N +G D DG +G D S +
Sbjct: 317 SYHGFENVLGSSGADAISGDALSNRLEGGAGGDRIDGRAGADVLV--GGSGADTLAGSAG 374
Query: 324 AIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
A ++ +E + ++ +RL + + L G D+
Sbjct: 375 ADTLFGGSEGDRLSGGTEADRLEGEAGADRVSGDAGHDSVFGGLDNDTLSGGTGNDLLSG 434
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G D F + D S R R D
Sbjct: 435 GSGADLARGDAGDDRVFGDGGADALFGDAGADQLSGGTDNDRLDGGSENDLLRGEDGADV 494
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
L + + + D ++ G +
Sbjct: 495 LIGGTGADTMEGGAGADTFVFLTTADSLNSVGGSD 529
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 45/149 (30%), Gaps = 4/149 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ G DL G + ++ G ++ T +
Sbjct: 420 NDTLSGGTGNDLLSGGSGADLA----RGDAGDDRVFGDGGADALFGDAGADQLSGGTDND 475
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G S ND++ G +V +G D +G +G DTF + + + I ++
Sbjct: 476 RLDGGSENDLLRGEDGADVLIGGTGADTMEGGAGADTFVFLTTADSLNSVGGSDHITRFE 535
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ + D + F +
Sbjct: 536 LGQDRIDLSALAPGAEFHLALVADGAGAV 564
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 46/338 (13%), Positives = 78/338 (23%), Gaps = 50/338 (14%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFES---------------SGNDVFDGSSGLDTFF 308
+ V GND + N+ F SG+D G +G DT
Sbjct: 22 PGFRNDRVAALGGNDTITITDGNDTVFGGTGHDRIVDAALAGFVSGDDQIFGEAGNDTIV 81
Query: 309 ----------------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER--------- 343
I + D L +E
Sbjct: 82 AGAGRDTINGGADSDTVDYSRSEAAITVNLGSGAAQSGGLAAGDRLISIENVTASGFGDQ 141
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF---- 399
L + + + + + + G D G D F
Sbjct: 142 LIGSGVANRLLGLGGNDRISGLGGNDLIDGGSGNDTILGGTENDGLTGGSGNDRLFGESG 201
Query: 400 -DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN----PDAFKALEYIASHEDLIN 454
D+ D L G+D+ A E + AL A ++ +
Sbjct: 202 ADTLSGGDGTDALSGGTGNDQLAGGTGNDQLAGGENDDLLSGDAGNDALSGGAGNDTVDG 261
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ ++ + G ++F S + + N G + HG
Sbjct: 262 GSGNDVVQLESRTEADRLEGGAGIDTLSFASLPAVFLPPGVFNGIDLVSGRSFAT-SYHG 320
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ A+ A L +AG D
Sbjct: 321 FENVLGSSGADAISGDALSNRLEGGAGGDRIDGRAGAD 358
>gi|158337688|ref|YP_001518864.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158307929|gb|ABW29546.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
Length = 535
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 56/187 (29%), Gaps = 23/187 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + + ++ + G+D +D GG + + G E ++ +
Sbjct: 328 SGDDRIEGWQGRDWLFGNTGNDTID----GGAGRDVAWGGSGDDLVFGGEGGDWLSGNEG 383
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ ++G G D + GN ++ GND G++G D
Sbjct: 384 SDILIGDEGADALWGNQGDDDLLGGRGNDRLWGNAGDDILR-------------GGEGHD 430
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + D L + + + LI +G DV +
Sbjct: 431 WLFGGNGADKLVG------GNGDDWLAGGAGDDVFVGGPGQDSLIGGLGNDVVQYQALMS 484
Query: 388 EFGLSEG 394
+F G
Sbjct: 485 DFTFRGG 491
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 54/154 (35%), Gaps = 6/154 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
++ + GDD L+GG N + G E + +
Sbjct: 383 GSDILIGDEGADALWGNQGDD----DLLGGRGNDRLWGNAGDDILRGGEGHDWLFGGNGA 438
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ +VG +G+D + G + ++VF G D G G D Y A + V
Sbjct: 439 DKLVGGNGDDWLAGGAGDDVFVGGPGQDSLIGGLGNDVVQYQALMSDFTFRGGPEQFQVI 498
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
A L +E L FA++ I ++ S +
Sbjct: 499 GAG--GTQTLLGIEFLEFANEQIAVHSLPFASSI 530
Score = 50.6 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/237 (13%), Positives = 63/237 (26%), Gaps = 31/237 (13%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDV---VIGNSANNVFFESSGNDVFDGSSGLDT 306
W + + I T+ +++G ++G S + F + D DG +G D
Sbjct: 264 WDPLHPTTQAHAIIGETIFNTLIGDIPQPTLNDILGTSQRDFLFGTKAADNIDGFAGND- 322
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F + S +I ++ ++ ++ A
Sbjct: 323 -FLFGLSGDDRIEGWQGRDWLF--------------------------GNTGNDTIDGGA 355
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ G D+ + +EG DI + + + R +
Sbjct: 356 GRDVAWGGSGDDLVFGGEGGDWLSGNEGSDILIGDEGADALWGNQGDDDLLGGRGNDRLW 415
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
G R + L + L+ D G D F ++
Sbjct: 416 GNAGDDILRGGEGHDWLFGGNGADKLVGGNGDDWLAGGAGDDVFVGGPGQDSLIGGL 472
Score = 42.5 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 53/219 (24%), Gaps = 30/219 (13%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
L + L + + + G+D GRD+
Sbjct: 305 FLFGTKAADNIDGFAGNDFLFGLSGDDRIEGWQGRDWLFGNTGNDTIDGGAGRDV----- 359
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
+ GS DDL VFG + G G + AL +DL+ +
Sbjct: 360 AWGGSGDDL--VFGGEGGDWL--SGNEGSDILIGDEGADALWGNQGDDDLLGGRGNDRLW 415
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
G D + F + +G D G+
Sbjct: 416 GNAGDDILRGGEGHDWLFGGNGADKLVGGNGDDWLAGGAGD------------------- 456
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
+ LI + QA F+ G E
Sbjct: 457 --DVFVGGPGQDSLIGGLGNDVVQYQALMSDFTFRGGPE 493
>gi|209549794|ref|YP_002281711.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535550|gb|ACI55485.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 928
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 52/300 (17%), Positives = 86/300 (28%), Gaps = 19/300 (6%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T+ + + T + Y D G G I I
Sbjct: 428 TTGAGNDNIAGGDG--ADTLNGGAGYDSLNGGVGNDTLYGGDGNDHISGDVGNDVIRGGA 485
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G V + D + + P +S T + + +
Sbjct: 486 GNDTIDDGELFGLSPEVIDINAGDGNDSISVGTLAPLNSGTVDGGDGIDTLQAASLRGLT 545
Query: 193 KIYGAPKGSLGNNIYKIE-------------VQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ G ++ D T+ DS DL D +G +
Sbjct: 546 IKNIEVLETAGWSVAGSSAQFESFDKIVWSTDPFGDFRAAVTLTDSAHLDLAD--ELGDL 603
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ID + G + + GS GND++ GN+ ++ +GND D
Sbjct: 604 GAFIDGDAFGIDVRTGG-GDDEFTGTDGNDIFDGSGGNDILNGNAGDDKLTGGAGNDTID 662
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G +G+DT + Y + N + + D L+ VE RFAD D
Sbjct: 663 GGAGIDTALFAGNFADYSL-ALNNGDHILTSVAEGADTLTGVEFARFADGLYDFGTETFT 721
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 67/427 (15%), Positives = 121/427 (28%), Gaps = 35/427 (8%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + + T + + D AD G G I + ++
Sbjct: 50 ADELGSVSADVTGSSGDNTITTGAGNDILSGGDGADTLTGGAGDDIIYGNAGNDKLVGGD 109
Query: 133 GLMHPGSYNGGYPVYGV------------DNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
G G+ + + + D
Sbjct: 110 GNDRITDGGFGFVSGPDGSLQPEIVDIDGGDGDDLITIERFAPLISGTIDGGAGIDTLRA 169
Query: 181 ATPMVSDIVAVQKIYGAPKGSLG--------NNIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
+ I V+ + A G + I + + + DS DL D
Sbjct: 170 SALRSLTIKNVEVLELADFQVSGSSSQFESFDKIARSTDPVFNFDPSLIVTDSAHLDLSD 229
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
G S + + + A V + GS G+D++ GN ++
Sbjct: 230 ELGDLGTLV----RGFSGIDVKTGDGDDEFAGSNVNDIFDGSGGSDLINGNDGDDKLTGG 285
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+GND DG +G+DT + Y + +N V + D L+DVE RFAD D
Sbjct: 286 AGNDTIDGGAGIDTAAFTGNFADYS-FAVDNGSRVVTSVLEGTDRLTDVEFARFADGVYD 344
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--------FDSYLY 404
+ +++ G + ++ F + + +I
Sbjct: 345 FATETFTVNSTEPGTPLNILDTNGATITKTGAEFEAYDVIRDSEINPLVPVNLVISDSGT 404
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGR--NPDAFKALEYIASHEDLINAFADAPDL 462
+ D+L + + G + IT G D L A ++ L +
Sbjct: 405 VDLSDELGSGSANVIGTSGNDVITTGAGNDNIAGGDGADTLNGGAGYDSLNGGVGNDTLY 464
Query: 463 VQVGKDH 469
G DH
Sbjct: 465 GGDGNDH 471
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 62/454 (13%), Positives = 105/454 (23%), Gaps = 30/454 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
S++ I +G + D G G T + A+
Sbjct: 257 GSNVNDIFDGSGGSDLINGNDGDDKLTGGAGNDTIDGGAGIDTAAFTGNFADYSFAV--- 313
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
++ + + + + + +I+
Sbjct: 314 ---DNGSRVVTSVLEGTDRLTDVEFARFADGVYDFATETFTVNSTEPGTPLNILD---TN 367
Query: 196 GAPKGSLGN-----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG------GVKNYID 244
GA G ++ + P I DSG DL D G N +
Sbjct: 368 GATITKTGAEFEAYDVIRDSEINPLVPVNLVISDSGTVDLSDELGSGSANVIGTSGNDVI 427
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+I G + T+ +S+ G GND + G N+ GNDV G +G
Sbjct: 428 TTGAGNDNIAGGDGADTLNGGAGYDSLNGGVGNDTLYGGDGNDHISGDVGNDVIRGGAGN 487
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT L NA D+ + + D R +
Sbjct: 488 DTIDDGELFGLSPEVIDINAGDGNDSISVGTLAPLNSGTVDGGDGIDTLQAASLRGLTIK 547
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL--------RNVFG 416
+ + F + S F + + L L F
Sbjct: 548 NIEVLETAGWSVAGSSAQFESFDKIVWSTDPFGDFRAAVTLTDSAHLDLADELGDLGAFI 607
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
G E D + ++ L D G D
Sbjct: 608 DGDAFGIDVRTGGGDDEFTGTDGNDIFDGSGGNDILNGNAGDDKLTGGAGNDTIDGGAGI 667
Query: 477 EGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ F Y + D ++
Sbjct: 668 DTALFAGNFADYSLALNNGDHILTSVAEGADTLT 701
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 62/485 (12%), Positives = 115/485 (23%), Gaps = 49/485 (10%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D I +++ ++ + + G G N + G
Sbjct: 214 DPSLIVTDSAHLDLSDELGDLGTLVRGFSGIDVKTGDGDDEFAGSNVNDIFDGSGGSDLI 273
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+G + G + D + F + + + + S + ++
Sbjct: 274 NGNDGDDKLTGGAGNDTIDGGAGIDTAAFTGNFADYSFAVDNGSRVVTSVLEGTDRLTDV 333
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY- 256
+ +Y + + D T+ + + S I
Sbjct: 334 EFARFADGVYDFATETFTVNSTEPGTPLNILDTNGATITKTGAEFEAYDVIRDSEINPLV 393
Query: 257 EKNMTIAQ-HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N+ I+ TV S SG+ VIG S N+V +GND G G DT
Sbjct: 394 PVNLVISDSGTVDLSDELGSGSANVIGTSGNDVITTGAGNDNIAGGDGADTL-------- 445
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
D L+ L + + +
Sbjct: 446 --------------NGGAGYDSLNG---------------GVGNDTLYGGDGNDHISGDV 476
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G DV +G + + D + A G
Sbjct: 477 GNDVIRGGAGNDTI--DDGELFGLSPEVIDINAGDGNDSISVGTLAPLNSGTVDGGDGID 534
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG--SYD 493
A + +++ + + F F F + + L ++
Sbjct: 535 TLQAASLRGLTIKNIEVLETAGWSVAGSSAQFESFDKIVWSTDPFGDFRAAVTLTDSAHL 594
Query: 494 DLRN------VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
DL + F G E D + ++ L D
Sbjct: 595 DLADELGDLGAFIDGDAFGIDVRTGGGDDEFTGTDGNDIFDGSGGNDILNGNAGDDKLTG 654
Query: 548 QAGKD 552
AG D
Sbjct: 655 GAGND 659
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
S + ++ +V V GSSG++ + + N++ G D G +G D
Sbjct: 35 GPVSLTVSDSSAADLADELGSVSADVTGSSGDNTITTGAGNDILSGGDGADTLTGGAGDD 94
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDAN 331
+ + K+ + + D
Sbjct: 95 IIY--GNAGNDKLVGGDGNDRITDGG 118
Score = 39.4 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 26/240 (10%), Positives = 55/240 (22%), Gaps = 10/240 (4%)
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ F + + + + + + L A + + G
Sbjct: 238 VRGFSGIDVKTGDGDDEFAGSNVNDIFDGSGGSDLINGNDGDDKLTGGAGNDTIDGGAGI 297
Query: 378 DVFESMKHFYEFGLS--EGRDITFDSYLYLGSYDDLRNVFGSDRGA--AARHYITHGVKE 433
D +F ++ + G + D+ +D A + + +
Sbjct: 298 DTAAFTGNFADYSFAVDNGSRVVTSVLEGTDRLTDVEFARFADGVYDFATETFTVNSTEP 357
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
G + + D ++ N + V L GS +
Sbjct: 358 GTPLNILDTNGATITKTGAEFEAYDVIRDSEINPLVPVNLVISDSGTVDLSDELGSGSAN 417
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ A G D L A ++ L + G DH
Sbjct: 418 VIGTSGNDVITTGA------GNDNIAGGDGADTLNGGAGYDSLNGGVGNDTLYGGDGNDH 471
>gi|456257|emb|CAA40918.1| stromelysin-3 precursor [Homo sapiens]
gi|58102165|gb|AAW65373.1| matrix metalloproteinase 11 (stromelysin 3) [Homo sapiens]
gi|119580007|gb|EAW59603.1| matrix metallopeptidase 11 (stromelysin 3), isoform CRA_a [Homo
sapiens]
Length = 488
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 62/199 (31%), Gaps = 60/199 (30%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEET 73
L W + Y+ + QE R AL WS V LTF E
Sbjct: 100 LSGGRWEKTDLTYRILRFPWQLV-----------QEQVRQTMAEALKVWSDVTPLTFTEV 148
Query: 74 SIH-SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
+DI + + P+ +++FD + W G +G
Sbjct: 149 HEGRADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGDDQG 206
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T L A HE GH LGL H + ++MS F +F
Sbjct: 207 TDLLQVAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTF 239
Query: 178 GYCATPMVSDIVAVQKIYG 196
Y + D VQ +YG
Sbjct: 240 RYPLSLSPDDCRGVQHLYG 258
>gi|149914898|ref|ZP_01903427.1| calcium binding hemolysin protein, putative [Roseobacter sp.
AzwK-3b]
gi|149811086|gb|EDM70923.1| calcium binding hemolysin protein, putative [Roseobacter sp.
AzwK-3b]
Length = 1051
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/341 (13%), Positives = 88/341 (25%), Gaps = 31/341 (9%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D + + ++ G + + + V G GND + G N
Sbjct: 557 GTDAADRINGKLGNDTV-WGVAGDDTVKGGWGDDIVDGGAGDDKVTGDWGNDQLFGGDGN 615
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+V F +G++V G +G D A L + + E L+F
Sbjct: 616 DVIFGGTGDNVLFGGAGNDRLV--ATGRLDILDGGAGNDTLIAGAE--------TTILKF 665
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ ++ ++ + I++ G + + F D + G
Sbjct: 666 TTGQTIGARQEVDTVHDFVLGQDV-IEIDGLNFSDRDDGFSSA------DFLREHASIRG 718
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ ++ G + + AS A + G
Sbjct: 719 NNLEIALSEGHTVVLKNLVSQLPSTSDSVDFQQIFGGSNAAST-----ASIEEVPQAPHG 773
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH----GVKEGRNPD 522
H TFD G D G+ + G + R
Sbjct: 774 WIHAGEGNDVMTGSATFDQLN--GELGDDTISGGAGNDTVKGGWGNDRVDGGSGDDRVTG 831
Query: 523 AF--KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
+ L + + + G D G ++
Sbjct: 832 DWGDDILFGGSGDDTIFGGDGSDSLFGGNGNDRLVASGQKD 872
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 53/148 (35%), Gaps = 11/148 (7%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ G N + + ++ + G + TI+ ++V G GND V G S ++ G
Sbjct: 775 IHAGEGNDVMTGSATFDQLNGELGDDTISGGAGNDTVKGGWGNDRVDGGSGDDRVTGDWG 834
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+D+ G SG DT F + + ++ N + + S + D++
Sbjct: 835 DDILFGGSGDDTIF-----------GGDGSDSLFGGNGNDRLVASGQKDFLADGAGNDTL 883
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + + D+
Sbjct: 884 EAGAETTILSFTKNDAPFGPVETDIVHG 911
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 76/280 (27%), Gaps = 24/280 (8%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G+D+++G A + GND G +G DT + V + Q
Sbjct: 551 GDDLLLGTDAADRINGKLGNDTVWGVAGDDTV--KGGWGDDIVDGGAGDDKVTGDWGNDQ 608
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF-GLSEG 394
L D ++L A + L+ D+ + +E
Sbjct: 609 --------LFGGDGNDVIFGGTGDNVLFGGAGNDRLVATGRLDILDGGAGNDTLIAGAET 660
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
+ F + +G+ ++ V D G+ D F + +++ H +
Sbjct: 661 TILKFTTGQTIGARQEVDTVH--DFVLGQDVIEIDGLNFSDRDDGFSSADFLREHASIRG 718
Query: 455 AFADAPDLV--QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
+ V + + V F GS A
Sbjct: 719 NNLEIALSEGHTVVLKNLVSQLPSTSDSVDFQQIF-GGSNAASTASIEEVPQA------P 771
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
HG + + A+ + L D AG D
Sbjct: 772 HGWIHA--GEGNDVMTGSATFDQLNGELGDDTISGGAGND 809
>gi|300868090|ref|ZP_07112727.1| hypothetical protein OSCI_3540026 [Oscillatoria sp. PCC 6506]
gi|300333928|emb|CBN57905.1| hypothetical protein OSCI_3540026 [Oscillatoria sp. PCC 6506]
Length = 1643
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 55/372 (14%), Positives = 100/372 (26%), Gaps = 24/372 (6%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
P +S D D+ I + LG + G
Sbjct: 1288 SSIPDLNSTDSTLNGTDNDDILIGSNANDAINGFGNNDILFGQLGNDNIYGGFASEFPIG 1347
Query: 149 V--DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG--APKGSLGN 204
D D + ++ D++ A D + I+G +G+
Sbjct: 1348 SESDRDLLLGNEGNDYINGNAGNDTIFAGKDNDVAIAGKDDDL----IWGDRGNDTIIGD 1403
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ F D G DLL GG N E ++ G E N TI
Sbjct: 1404 ---EGADSLFGGTFNPFDPDLNGRDLL----FGGTGNDFLSGQEGEDTLLGGEDNDTIQG 1456
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ ++G +D++ G+ ++ GND G G A I
Sbjct: 1457 GKDDDVILGGDRDDLLWGDRGDDTICGGDGNDTIFGDIGS-AIALAANGEEDCICGGSGN 1515
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+++ D L E K L + + L +G ++
Sbjct: 1516 DLIFGG--EGDDRLDGDE------GNDTLYGGKDNDSLRGGSGEDWLCGDLGDNILVGGS 1567
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
F L G + + LR ++ + ++ + L
Sbjct: 1568 GSDRFVLGLGGSDAIADFTVGEDFLILRGGLTFEQLSVSQDVGGSLIAIATTGQVLATLS 1627
Query: 445 YIASHEDLINAF 456
+ ++ + F
Sbjct: 1628 GVQANLITQDNF 1639
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/328 (13%), Positives = 84/328 (25%), Gaps = 49/328 (14%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN-N 287
+ D TL G + I + + + +I G+ N + +++ G ++ IG+ ++ +
Sbjct: 1294 NSTDSTLNGTDNDDILIGSNANDAINGFGNNDILFGQLGNDNIYGGFASEFPIGSESDRD 1353
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ + GND +G++G DT F + + D + E
Sbjct: 1354 LLLGNEGNDYINGNAGNDTIF----AGKDNDVAIAGKDDDLIWGDRGNDTIIGDE----- 1404
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ L G D + E D G
Sbjct: 1405 -GADSLFGGTFNPFDPDLNGRDLLFGGTGNDFLSGQEGEDTLLGGEDNDTIQG-----GK 1458
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
DD+ D + G D + + A + +
Sbjct: 1459 DDDVILGGDRDDLL----WGDRGDDTICGGDGNDTIFGDIGSAIALAANGEEDCICGGSG 1514
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
+ G + R + L D +L
Sbjct: 1515 NDLIFGGEGDDRLDGDEGNDTLYGGKD-----------------------------NDSL 1545
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFS 555
+ + L D + +G D F
Sbjct: 1546 RGGSGEDWLCGDLGDNILVGGSGSDRFV 1573
>gi|56696278|ref|YP_166635.1| beta-lactamase, putative [Ruegeria pomeroyi DSS-3]
gi|56678015|gb|AAV94681.1| beta-lactamase, putative [Ruegeria pomeroyi DSS-3]
Length = 707
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 62/225 (27%), Gaps = 7/225 (3%)
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG- 237
Y T + V G+ E Q S G + +D+
Sbjct: 381 YQDTSATGAVETVLTKGDVSLSFAGDMAGFDEAQLSFSDGSVLRVADAGGEWIDILHDTR 440
Query: 238 ---GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
G + ++ + + G N + + + G GND + G ++ G
Sbjct: 441 LGDGGETVQAGPQDADNRLIGLGGNDGLFGAYGDDRISGGGGNDRLGGRDGDDALEGGDG 500
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDS 353
+DV DG G D + ++ + H D ++L
Sbjct: 501 HDVLDGGRGDDQL--SGGAGSDQLNGGRGDDTLEGGAGHDLLDGGRGDDQLSGGAGSDQL 558
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ LE A ++ L G D + G D
Sbjct: 559 SGGRGDDTLEGGAGHDLLDGGRGDDQLSGGAGSDQLSGGRGDDTL 603
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 4/130 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ Q + GDD L+ GG + + + G + ++
Sbjct: 545 GDDQLSGGAGSDQLSGGRGDDTLE----GGAGHDLLDGGRGDDQLSGGAGSDQLSGGRGD 600
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G +G+D++ G ++ +G+D+ G SG D F + A + + F+
Sbjct: 601 DTLEGGAGHDLLKGGRGDDRLEGGAGHDMLIGGSGDDVFVFAATAGHDHVLDFQAGADRL 660
Query: 329 DANEHKQDFL 338
D + F
Sbjct: 661 DLSGAGVSFA 670
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 58/261 (22%), Gaps = 51/261 (19%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESV---VGSSGNDVVIGN--SANNVFFESSGNDVFDGS 301
S G + A I+ + G + V A+N GND G+
Sbjct: 412 EAQLSFSDGSVLRVADAGGEWIDILHDTRLGDGGETVQAGPQDADNRLIGLGGNDGLFGA 471
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G D R+
Sbjct: 472 YGDD-------------------------------------RISGGGGNDRLGGRDGDDA 494
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
LE ++ L G D + G D G+ DL + D
Sbjct: 495 LEGGDGHDVLDGGRGDDQLSGGAGSDQLNGGRGDDTLEG-----GAGHDLLDGGRGDDQL 549
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
G + LE A H+ L D G D S ++
Sbjct: 550 ----SGGAGSDQLSGGRGDDTLEGGAGHDLLDGGRGDDQLSGGAGSDQLSGGRGDDTLEG 605
Query: 482 TFDSYLYLGSYDDLRNVFGSD 502
L G D R G+
Sbjct: 606 GAGHDLLKGGRGDDRLEGGAG 626
>gi|332705065|ref|ZP_08425150.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332356242|gb|EGJ35697.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 354
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/230 (17%), Positives = 64/230 (27%), Gaps = 25/230 (10%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+L+DL + I + ++ G ++ T+ + + G GND + G ++V
Sbjct: 5 NLVDLETNTTNTSVILIGDSGNDTLSGGSQDDTLKGRAGDDILNGRGGNDRLEGEEDSDV 64
Query: 289 FFESSGNDVFDGSSGLDTFFY--YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
GND G SG D L + + + D L+
Sbjct: 65 LNGGEGNDTLIGGSGNDVLTGGPGPSFGLSLFEVKQTSDHDFLDGGTGNDTLNG------ 118
Query: 347 ADQCIDSVNVKQRSIL-------------EYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
AD L Y + L G DV E
Sbjct: 119 ADGNDTLKGGAGDDSLLGDVRRRLTGIPINYNPGRDILDGGDGNDVLEGGGSSDTLIGGT 178
Query: 394 GRDI---TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
G D D G +D G+ + + + G D F
Sbjct: 179 GNDTLIGDGDDQNVFGGGNDYLIG-GNGDDSLVGGNGSDTLTGGHGSDIF 227
Score = 44.4 bits (103), Expect = 0.059, Method: Composition-based stats.
Identities = 33/215 (15%), Positives = 45/215 (20%), Gaps = 9/215 (4%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
L Q L+ A + L G D E + EG D
Sbjct: 19 ILIGDSGNDTLSGGSQDDTLKGRAGDDILNGRGGNDRLEGEEDSDVLNGGEGNDTLIGGS 78
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
D L G G + + + A D + A L
Sbjct: 79 G----NDVLTGGPGPSFGLSLFEVKQTSDHDFLDGGTGNDTLNGADGNDTLKGGAGDDSL 134
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR---GAAARHYITHGVKEGR 519
+ + G D D L SD G I G +
Sbjct: 135 LGDVRRRL--TGIPINYNPGRDILDGGDGNDVLEGGGSSDTLIGGTGNDTLIGDGDDQNV 192
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
L + L+ G D F
Sbjct: 193 FGGGNDYLIGGNGDDSLVGGNGSDTLTGGHGSDIF 227
>gi|163792384|ref|ZP_02186361.1| Hemolysin-type calcium-binding toxin [alpha proteobacterium BAL199]
gi|159182089|gb|EDP66598.1| Hemolysin-type calcium-binding toxin [alpha proteobacterium BAL199]
Length = 832
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 47/242 (19%), Positives = 71/242 (29%), Gaps = 29/242 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
Q I GDD L GG N + + + G T+ T
Sbjct: 586 SGNNYAVGDDSAQFISLGEGDDTL----YGGDGNDTIGSADGADQLFGEGGADTVNGGTG 641
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++V G + DV GN ++V + + GND G G D F + N
Sbjct: 642 ADTVWGGTDADVAYGNQDDDVVYGNQGNDTLFGGQGNDVVF----GGQDADIVYGNLGDD 697
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D L +L A + LI +G D F+
Sbjct: 698 VVYGNLGDDTL---------------YGGAGNDLLYGGAGNDTLIGGVGNDTFQGGLGND 742
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
F G D+ S + DR A + G + D F L+ +
Sbjct: 743 LFSTGTGNDVIIVSASSGADTVSDFDGASGDRVQVASNI------NGGSIDTFAELQAAS 796
Query: 448 SH 449
++
Sbjct: 797 TN 798
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 57/170 (33%), Gaps = 2/170 (1%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTI-YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ GN + S ++ ++ + ++ GG + +I G
Sbjct: 217 STNDGNVAAGETLTVNASTNSSSVTWNGAAETDGVFSMTGGSGADSLVGGAGADTISGNS 276
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N T+ + + G +GND + G + + +GND+ G SG DT A + +
Sbjct: 277 GNDTLRGEAGNDRLFGGTGNDQLSGGAGTDTLSGGAGNDLMSGGSGFDTLVGGAGNDTFT 336
Query: 318 IYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ N + D ++ V+ S + + T
Sbjct: 337 GSASDHNGDTISDFATGDSIVVTGVDLSSLNGTTASSTLATGSNGITLTG 386
>gi|163747112|ref|ZP_02154468.1| type I secretion target repeat protein [Oceanibulbus indolifex
HEL-45]
gi|161379673|gb|EDQ04086.1| type I secretion target repeat protein [Oceanibulbus indolifex
HEL-45]
Length = 971
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 53/440 (12%), Positives = 107/440 (24%), Gaps = 25/440 (5%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+T+ D +N P + D D G G +
Sbjct: 364 AGADLIDTAYTGDPDGDMIDNDDALLPGAEGDDDYVRAGDGDDTILAGDGDDIVEGGAGS 423
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
E+ G + NG + ++DS + +D G
Sbjct: 424 DEVYGGDGDDMIITGNGDIAPDLGYPESDSDSLSFDPDADPENDRDYVDGGAGNDTISTG 483
Query: 186 SDIVAVQKIYGAPKGSLGNNIYK-----IEVQQKDSPFIQTIYDSGGDDLL--------- 231
D + G + G + + + +I+ G+D +
Sbjct: 484 DDRDTIYGGTGDDVINAGIDDDFVNGGDGDDRIVGGEGNDSIFGGAGNDTIYAGNDPELG 543
Query: 232 -------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
D + ++ G + I + + G SGND + G
Sbjct: 544 LDVLDIPDDMDPSNPFTPDRVPNNGMDTVDGGSGDDVIYGADDADMLRGGSGNDYIDGQI 603
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVER 343
+++ ++GND G G D+ +Y + + + + +
Sbjct: 604 DDDIIEGNTGNDTLLGGQGDDSI--SGGQGDDMLYGGTGDDTLRGNRDDDYLEGGAGDDV 661
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF-GLSEGRDITFDSY 402
L + + + L+ + L G D+ + F ++ G D+ S
Sbjct: 662 LDGGGENDTLMGGEGDDTLQGGQGDDLLDGGAGVDIMDGGADQDTFVNVNAGDDVDGGSA 721
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
DLR + + + + I
Sbjct: 722 GVDYDTLDLRGSAPEGGRLEVTYTSDDREDGFVDYFNEDGSDAGRLNFVEIENVIIPCFT 781
Query: 463 VQVGKDHFSNFGCEEGRFVT 482
E V
Sbjct: 782 PGTKIATPKGEIRVEELQVG 801
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 64/497 (12%), Positives = 124/497 (24%), Gaps = 30/497 (6%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
S NG T S F E+ + + + + G G+ N
Sbjct: 195 DSDANGDTLTVTMASCPFGEVVINGDGTLTFTPDADFNGDTTITYTVDDGNGGTDTGTVN 254
Query: 142 GGYPVYGVDNDYENDSFLTS----VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG- 196
+D+ T+ V+ + D+ +D A D G
Sbjct: 255 VTVNPVNDAPVANDDTASTTGTDAVVIPVLDNDTDVDGDTLSVADASSDDGTVTINGDGT 314
Query: 197 ----APKGSLGNNIYKIEVQQKDSPFIQTIY----DSGGDDLLDLTLIGGVKNYIDLNTE 248
A G G+ V D + + GG + ID
Sbjct: 315 ITFTANDGFTGDATINYTVSDPDGLTDEGVVTVSVGDGGATRDGYVDGTAGADLIDTAYT 374
Query: 249 SWSSIGGYEKNMTIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + + + V G+D ++ +++ +G+D G G D
Sbjct: 375 GDPDGDMIDNDDALLPGAEGDDDYVRAGDGDDTILAGDGDDIVEGGAGSDEVYGGDGDD- 433
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + + + D +D + + R +
Sbjct: 434 MIITGNGDIAPDLGYPESDSDSLSFDPDADPENDRDYVDGGAGNDTISTGDDRDTIYGGT 493
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGA- 421
+ + I D EG D F + +Y G+ +L
Sbjct: 494 GDDVINAGIDDDFVNGGDGDDRIVGGEGNDSIFGGAGNDTIYAGNDPELGLDVLDIPDDM 553
Query: 422 -----AARHYITHGVKEGRNPDAFKALEYIASHEDLINAF-ADAPDLVQVGKDHFSNFGC 475
+ + + + + + Y A D++ + Q+ D
Sbjct: 554 DPSNPFTPDRVPNNGMDTVDGGSGDDVIYGADDADMLRGGSGNDYIDGQIDDDIIEGNTG 613
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
+ G D G+ R EG D L+ ++
Sbjct: 614 NDTLLGGQGDDSISGGQGDDMLYGGTG-DDTLRGNRDDDYLEGGAGD--DVLDGGGENDT 670
Query: 536 LINAFADAPDLVQAGKD 552
L+ D G D
Sbjct: 671 LMGGEGDDTLQGGQGDD 687
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 54/429 (12%), Positives = 98/429 (22%), Gaps = 42/429 (9%)
Query: 73 TSIHSDIKFISSNN------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+I+ D + N + D + V G + + A
Sbjct: 307 VTINGDGTITFTANDGFTGDATINYTVSDPDGLTDEGVVTVSVGDGGATRDGYVDGTA-- 364
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
+ Y D D + +++ D + A G T +
Sbjct: 365 ------------GADLIDTAYTGDPDGDMIDNDDALLPGAEGDDDYVRAGDG-DDTILAG 411
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D + + G + + + Y D L +N D
Sbjct: 412 DGDDIVEGGAGSDEVYGGDGDDMIITGNGDIAPDLGYPESDSDSLSFDPDADPENDRDYV 471
Query: 247 TES--WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+I + TI T + + +D V G ++ GND G +G
Sbjct: 472 DGGAGNDTISTGDDRDTIYGGTGDDVINAGIDDDFVNGGDGDDRIVGGEGNDSIFGGAGN 531
Query: 305 DTFFYYA----------------PSYLYKIYRFENAIIVYDANEHKQDFLSDVER---LR 345
DT + PS + R N + D + + LR
Sbjct: 532 DTIYAGNDPELGLDVLDIPDDMDPSNPFTPDRVPNNGMDTVDGGSGDDVIYGADDADMLR 591
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
I+E + L+ G D + G D +
Sbjct: 592 GGSGNDYIDGQIDDDIIEGNTGNDTLLGGQGDDSISGGQGDDMLYGGTGDDTLRGNRDDD 651
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ G G + L+ A + + +
Sbjct: 652 YLEGGAGDDVLDGGGENDTLMGGEGDDTLQGGQGDDLLDGGAGVDIMDGGADQDTFVNVN 711
Query: 466 GKDHFSNFG 474
D
Sbjct: 712 AGDDVDGGS 720
>gi|104782921|ref|YP_609419.1| RTX toxin [Pseudomonas entomophila L48]
gi|95111908|emb|CAK16632.1| putative RTX toxin [Pseudomonas entomophila L48]
Length = 2350
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 54/171 (31%), Gaps = 2/171 (1%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T+ D G I ++ T + + T+ +
Sbjct: 2066 NAVNEVVHDTYTVSDGHGGSATGNVDITYQPGHVLDGTAGDDVLLAGSGDNTLNGGAGND 2125
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+V +GND + G N++ GND+ DG G DT + +
Sbjct: 2126 VLVAGTGNDHLYGGEGNDLLIAGPGNDLLDGGPGSDTVSFAKAGAGVVVDLGHAGAQNTV 2185
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L+ +E L ++ + ++L A + L G D F
Sbjct: 2186 G--AGVDTLTSIENLIGSEYNDTLIGNGGDNVLTGGAGDDTLTGGGGNDTF 2234
>gi|58331148|ref|NP_005931.2| stromelysin-3 preproprotein [Homo sapiens]
gi|317373418|sp|P24347|MMP11_HUMAN RecName: Full=Stromelysin-3; Short=SL-3; Short=ST3; AltName:
Full=Matrix metalloproteinase-11; Short=MMP-11; Flags:
Precursor
Length = 488
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 62/199 (31%), Gaps = 60/199 (30%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEET 73
L W + Y+ + QE R AL WS V LTF E
Sbjct: 100 LSGGRWEKTDLTYRILRFPWQLV-----------QEQVRQTMAEALKVWSDVTPLTFTEV 148
Query: 74 SIH-SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
+DI + + P+ +++FD + W G +G
Sbjct: 149 HEGRADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGDDQG 206
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T L A HE GH LGL H + ++MS F +F
Sbjct: 207 TDLLQVAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTF 239
Query: 178 GYCATPMVSDIVAVQKIYG 196
Y + D VQ +YG
Sbjct: 240 RYPLSLSPDDCRGVQHLYG 258
>gi|103484506|dbj|BAE94745.1| membrane type-matrix metalloproteinase 16 [Gallus gallus]
Length = 609
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 58/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-- 75
L Q W + I Y +T + ++ R A W V LTFEE
Sbjct: 122 LTGQKWQHKHIAYSIKNVTPKVG-------DAETRKAIRRAFDVWQNVTPLTFEEVPYIE 174
Query: 76 ------HSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|45383954|ref|NP_990528.1| matrix metalloproteinase-16 [Gallus gallus]
gi|1519365|gb|AAB07491.1| membrane type-matrix metalloproteinase [Gallus gallus]
Length = 608
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 58/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-- 75
L Q W + I Y +T + ++ R A W V LTFEE
Sbjct: 122 LTGQKWQHKHIAYSIKNVTPKVG-------DAETRKAIRRAFDVWQNVTPLTFEEVPYIE 174
Query: 76 ------HSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 175 LENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 234
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + + +N
Sbjct: 235 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN------------------- 275
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F D+ +QKIYG P
Sbjct: 276 --FKLPN----DDLQGIQKIYGPPD 294
>gi|257093098|ref|YP_003166739.1| Hemolysin-type calcium-binding domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257045622|gb|ACV34810.1| Hemolysin-type calcium binding domain protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 4041
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 74/511 (14%), Positives = 136/511 (26%), Gaps = 45/511 (8%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL------ 132
I + Y S + + G + A GHA
Sbjct: 3320 ADAIHEDADAGFDTVYSSVTWTLGEHLERLYLTGGTAIDATGNARANTLYGHANSAVNIL 3379
Query: 133 --GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
GL Y G D D NDS + + + A + + +A
Sbjct: 3380 SGGLGDDIYYLGAGDRVVEDADQGNDSVYGYATEHTLATNVEHLFLAVATAATLTGNDLA 3439
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ A L T+ GDD + + + D +
Sbjct: 3440 NRLRGNAGDDRLVG--LAGNDTLDGGLGADTLIGGTGDDSYTVDNL-ADAIHEDADAGFD 3496
Query: 251 S-------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIG--NSANNVFFESSGNDVFDGS 301
+ ++G + + + + T I+ G++ + + G NSA N+ G+D++
Sbjct: 3497 TVYSSVTWTLGEHLERLYLTGGTAID-ATGNARANTLYGHANSAVNILTGGLGDDIYYLG 3555
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G D A +Y + + + EH ++ L D
Sbjct: 3556 AG-DRAVEDADQGNDSVYGYGSEHTLAANVEHLFLAVATAATLTGNDLANRLRGNAGDDR 3614
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLS-------EGRDITFDSYLYLGSY------ 408
L A + L +G D + + E D FD+ ++
Sbjct: 3615 LAGLAGNDTLDGGLGADTLIGGTGDDSYTVDNLADAIHEDADAGFDTVYSSVTWTLGEHL 3674
Query: 409 -------DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
+ G+ R + V A + +A
Sbjct: 3675 ERLYLTGGTAIDATGNARANTLYGHANSAVNILTGGLGDDIYYLGAGDRAVEDADQGNDS 3734
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
+ G +H E F+ + L D + G+ G
Sbjct: 3735 VYGYGSEHTLAA-NVEHLFLAVATAATLTGNDLANRLRGNAGDDRLA--GLAGNDTLDGG 3791
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKD 552
LE A ++ L ++ A AG +
Sbjct: 3792 AGNDVLEGGAGNDTLQDSSGSALFTGGAGNN 3822
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 76/298 (25%), Gaps = 29/298 (9%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G++ DV++G S N++ ++G D G G DT+ + + V+
Sbjct: 3034 LLGTANKDVLVGTSGNDLLNGAAGADTMRGGDGDDTYVVDERGDTVVELANQGSDTVW-- 3091
Query: 331 NEHKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ +VE L A I+ R+ L + L D E +
Sbjct: 3092 SLVSHTLADNVENLVLAAGASINGTGNALRNRLTGNSGNNVLDGGAEADTLEGGTGNDTY 3151
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
Y+G D + + + N
Sbjct: 3152 --------------YVGDKDTVIEAADAGKDTIVSGIRWTLGANVENLTLTGTAAINGYG 3197
Query: 450 EDLINAFADAPDLVQVGKDH-------FSNFGCEEGRFVT-FDSYLYLGSYDDLRNV--- 498
DL N + + G + +Y + +
Sbjct: 3198 NDLANTLRGDTNSAANVLTGGLGDDIYYLGAGDRVVEDADQGNDSVYGYATEHTLAANVE 3257
Query: 499 -FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
AA R L +A ++ L + G D ++
Sbjct: 3258 HLFLAVATAATLTGNDLANRLRGNAGDDRLAGLAGNDTLDGGLGADTLIGGTGDDSYT 3315
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 61/419 (14%), Positives = 112/419 (26%), Gaps = 35/419 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+D+ N + AD G G + N I
Sbjct: 3270 TGNDLANRLRGNAGDDRLAGLAGNDTLDGGLGADTLIGGTGDDSYTVDNLADAI------ 3323
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G+ + Y ++ T AV +
Sbjct: 3324 --HEDADAGFDTVYSSVTWTL--GEHLERLYLTGGTAIDATGNARANTLYGHANSAVNIL 3379
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G LG++IY + + D G D + + ++ + ++
Sbjct: 3380 SGG----LGDDIYYL----GAGDRVVEDADQGNDSVYGYATEHTLATNVEHLFLAVATAA 3431
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N + + G++G+D ++G + N+ G D G +G D++ +
Sbjct: 3432 TLTGND------LANRLRGNAGDDRLVGLAGNDTLDGGLGADTLIGGTGDDSYTVDNLAD 3485
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASY--EDL 371
VY + +ERL ID+ + + L A+ L
Sbjct: 3486 AIHEDADAGFDTVY--SSVTWTLGEHLERLYLTGGTAIDATGNARANTLYGHANSAVNIL 3543
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+G D++ E D DS GS L A A G
Sbjct: 3544 TGGLGDDIYYLGAGDRAV---EDADQGNDSVYGYGSEHTLAANVEHLFLAVATAATLTGN 3600
Query: 432 KEG---RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
R L +A ++ L + G D ++ + D+
Sbjct: 3601 DLANRLRGNAGDDRLAGLAGNDTLDGGLGADTLIGGTGDDSYTVDNLADAIHEDADAGF 3659
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/357 (13%), Positives = 86/357 (24%), Gaps = 31/357 (8%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + Q D + T+ DS G+D + GG ++ ID I
Sbjct: 856 GVQSLRDDLGNVIGDPDQPDPAYADTLKDSTGNDHI---QSGGGRDLIDARRGGADWIEA 912
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + + + G G D++ + + +G D+ G SG D F L
Sbjct: 913 GTGDDWVDGGAGADRIQGGDGRDILEASDDADTVEGGTGYDLITGGSGGDHLFARDKVEL 972
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + + A + L A + L
Sbjct: 973 RAAFANNDVQMASGAPGESG---------------DLLDGGEDDDTLVGDAGNDFLAGGA 1017
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI-THGVKEG 434
G D+ + + + +V + + G +
Sbjct: 1018 GDDLTIGGGGDDNLSGDAVVLTATRDWQVIRLVETRGDVTTFRQDFRSLEITRRDGGADL 1077
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE----EGRFVTFDSYLYLG 490
A + +D ++ AD + G G G
Sbjct: 1078 MFGGAGNDWLFAGPGDDFVDGGADDDVAFGGEGNDQIYGGRGVDILSGDEPADPDDPTRG 1137
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
L D G H +G L A ++ + P
Sbjct: 1138 LPGILHGSDYLDGGDGNDHLSGNGNG--------DRLFGGAGNDQISGDDGLTPGEY 1186
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 73/567 (12%), Positives = 139/567 (24%), Gaps = 96/567 (16%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
YT + +AD + D + L
Sbjct: 3313 SYTVDNLADAIHEDADAGFDTVYSSVTWTLGEHL-------------------------- 3346
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
E + ++ N T + + I G+G
Sbjct: 3347 ----ERLYLTGGTAIDATGNARANTLYGHANSAVNI-------LSGGLGDDIYYLGAGDR 3395
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
+ D D NDS + + + A +
Sbjct: 3396 VV--------------------EDADQGNDSVYGYATEHTLATNVEHLFLAVATAATLTG 3435
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+ +A + A L T+ GDD + + + D +
Sbjct: 3436 NDLANRLRGNAGDDRLVG--LAGNDTLDGGLGADTLIGGTGDDSYTVDNL-ADAIHEDAD 3492
Query: 247 TESWS-------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIG--NSANNVFFESSGNDV 297
+ ++G + + + + T I+ G++ + + G NSA N+ G+D+
Sbjct: 3493 AGFDTVYSSVTWTLGEHLERLYLTGGTAID-ATGNARANTLYGHANSAVNILTGGLGDDI 3551
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNV 356
+ +G D A +Y + + + ++VE L A
Sbjct: 3552 YYLGAG-DRAVEDADQGNDSVYGYGS----------EHTLAANVEHLFLAVATAATLTGN 3600
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ L A + L + G D + G D L ++D F
Sbjct: 3601 DLANRLRGNAGDDRLAGLAGNDTLDGGLGADTLIGGTGDDSYTVDNLADAIHEDADAGFD 3660
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ + H + A L A +++ G +
Sbjct: 3661 TVYSSVTWTLGEHLERLYLTGGTAIDATGNARANTLYGHANSAVNILTGGLGDDIYYLGA 3720
Query: 477 EGRFV-----------TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
R V + S L + + AA R
Sbjct: 3721 GDRAVEDADQGNDSVYGYGSEHTLAANVEHL---FLAVATAATLTGNDLANRLRGNAGDD 3777
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKD 552
L +A ++ L + AG D
Sbjct: 3778 RLAGLAGNDTLDGGAGNDVLEGGAGND 3804
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 67/502 (13%), Positives = 128/502 (25%), Gaps = 49/502 (9%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + I+ G + AD G G + A
Sbjct: 2213 VTGTAGKDVINGQAGTDNRLYGFDGDDSLNGAEVADTLAGGRGNDRLAGGFGADIYLFAN 2272
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G VD D +V ++ G D V V+
Sbjct: 2273 GDGADVINETNDTNGTVDTLRLTDLAAAAVSELARVGSDLIVRLGGS-------DQVTVR 2325
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ Y A + I + + I+ + G D +
Sbjct: 2326 QQYNAATSAGIEQITFADGLTWTADDIKARLSTLGTSAADSLTGFDGVG---------NR 2376
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G++ + T++ + + G +GND + G + + +GNDV+D D +A
Sbjct: 2377 LFGFDGSDTLSGGDRGDLLDGGNGNDWLEGLAGADTLVGGAGNDVYDIDDANDLIIEHAG 2436
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV--NVKQRSILEYTASYED 370
Y + + + + + L L A +D+V ++L+ A +
Sbjct: 2437 EGRDTAYSWVSFDLASQGSGVEVLTLLGSNPLGAAGNELDNVINGNAAANVLKGGAGNDT 2496
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L G D + + EG D D L VFG+D R T
Sbjct: 2497 LRAYGGSDNLDGGSGRDDLWGGEGDDTLDGGTGD----DTLSGVFGADTYLFRRGSGTDR 2552
Query: 431 VKEGR---------------------------NPDAFKALEYIASHEDLINAFADAPDLV 463
+ + R + ++++ +S + A +
Sbjct: 2553 IIDDRRLGAPVDRDNIRFDEGIRMQDLTIAVLSDESWQLTLAGSSDSLVFVKDAGSRFAD 2612
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
+ +G V L + D
Sbjct: 2613 GQPVIPIESLQFADGTRVDLTGALVGTAGADRLAASFFAIPTFGPVTTATINVRIDAQAG 2672
Query: 524 FKALEYIASHEDLINAFADAPD 545
+ ++ L D
Sbjct: 2673 NDTVTGGGGNDSLRGGDGDDVL 2694
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 52/144 (36%), Gaps = 5/144 (3%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D+++ +Y + G + ++ S + ++ G+D + GG +
Sbjct: 630 DVLSTDTLY-FEDRATGMTLQEVNSLTATSDGSRYLFGGDGND----SFFGGDEADHLYG 684
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + + + + + + G G D ++G S + GND+ DG +G DT
Sbjct: 685 GAGMDRLDGGKGDDHLEGNAGSDILSGGEGQDTLLGGSGMDRLEGGKGNDLLDGGAGDDT 744
Query: 307 FFYYAPSYLYKIYRFENAIIVYDA 330
+ I + +
Sbjct: 745 YVLDVGGGFDTIRDSDGIGHIRIG 768
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/418 (13%), Positives = 113/418 (27%), Gaps = 36/418 (8%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + N +S + +AD G G T + I A
Sbjct: 3108 AAGASINGTGNALRNRLTGNSGNNVLDGGAEADTLEGGTGNDTYYVGDKDTVIEAADAGK 3167
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G + + + ++ Y + + A + +
Sbjct: 3168 DTIVSGIRWT-LGANVENLTLTGTAAINGYGNDLANTLRGDTNSAANVLTGGLGDDIYYL 3226
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA + + ++Y + L ++ L + +++ G
Sbjct: 3227 GAGDRVVED----------ADQGNDSVYGYATEHTL-----AANVEHLFLAVATAATLTG 3271
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + + G++G+D + G + N+ G D G +G D++ +
Sbjct: 3272 ---------NDLANRLRGNAGDDRLAGLAGNDTLDGGLGADTLIGGTGDDSYTVDNLADA 3322
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASY--EDLI 372
VY + +ERL ID+ + + L A+ L
Sbjct: 3323 IHEDADAGFDTVY--SSVTWTLGEHLERLYLTGGTAIDATGNARANTLYGHANSAVNILS 3380
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+G D++ E D DS + L A A G
Sbjct: 3381 GGLGDDIYYLGAGDRVV---EDADQGNDSVYGYATEHTLATNVEHLFLAVATAATLTGND 3437
Query: 433 EG---RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
R L +A ++ L + G D ++ + D+
Sbjct: 3438 LANRLRGNAGDDRLVGLAGNDTLDGGLGADTLIGGTGDDSYTVDNLADAIHEDADAGF 3495
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 90/291 (30%), Gaps = 15/291 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+D+ N + AD G G + N I
Sbjct: 3598 TGNDLANRLRGNAGDDRLAGLAGNDTLDGGLGADTLIGGTGDDSYTVDNLADAIHEDADA 3657
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
Y+ G + + T++ + + + + + +
Sbjct: 3658 GFDTVYSSVTWTLGEHLERLYLTGGTAIDATGNARANTLYGHANSAVNILTGGLGDDIYY 3717
Query: 195 YGAPKGSLGN------NIYKIEVQQKDSPFIQTIY-------DSGGDDLLDLTLIGGVKN 241
GA ++ + ++Y + + ++ ++ G+DL + +
Sbjct: 3718 LGAGDRAVEDADQGNDSVYGYGSEHTLAANVEHLFLAVATAATLTGNDLANRLRGNAGDD 3777
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ ++ G N + +++ SSG+ + G + NN +G+ ++ G
Sbjct: 3778 RLAGLAG-NDTLDGGAGNDVLEGGAGNDTLQDSSGSALFTGGAGNNTLSGGAGSQIYLGG 3836
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+G DT + + R + + A + QD LS + + D +D
Sbjct: 3837 TGNDTLRTGPGNDIIAFNRGDGQDTLA-AGDSGQDVLSLGGVVAYTDLSLD 3886
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/258 (13%), Positives = 76/258 (29%), Gaps = 64/258 (24%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ I ++ + I G + N + + +++ G +G D ++G +++ SG+D
Sbjct: 1912 TAGNDVIVGVPDAANRIYGLDGNDRLTGGGLADTLDGGAGADSLVGADGDDLLLGGSGDD 1971
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---------------- 340
+G +G DT+F+ S + +++ + D L+D
Sbjct: 1972 FVNGGAGSDTYFWGLGSGNDTVDNSDSS-LDTDRLIIGNGLLADDLIFARSHDDLVIRVR 2030
Query: 341 ----------------VERLRFADQ----------------------------CIDSVNV 356
++R+RFAD +
Sbjct: 2031 TSGEHVLVLRHFAGAPIDRVRFADGSEWNGAEIATHLSTELSEGADIYTATLASDTIDAL 2090
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFY--EFGLSEGRDITFDSYLYLGSYDDLRNV 414
+++ A + + G D F + +G D+ D + D+
Sbjct: 2091 GGDDLVDGLAGDDVITGGRGNDTLRGGAGSDHYRFAVGDGSDLIVDD-DVTADHADVVEF 2149
Query: 415 FGSDRGAAARHYITHGVK 432
+G
Sbjct: 2150 LDVASSVVTVTRPHNGND 2167
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 62/543 (11%), Positives = 118/543 (21%), Gaps = 115/543 (21%)
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
++ + D G GK +++ E+ G + +
Sbjct: 1265 GDDPTLDSRYHGRDTLDGGAGKDSLIGGGGNDELYGGQGDDVLAGDDTPDTPLATSAHGD 1324
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI---EV 211
+ S G + +G G++IY +
Sbjct: 1325 DLLDGGSGNDGLRGGGGADTLIGGTGTDYL--------------EGGAGDDIYLFAAGDS 1370
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM----------- 260
+ F++ + D+ GD+ + + I + +S G +
Sbjct: 1371 PRDADDFVEHVVDADGDNTIVFSQATPTDLRIAKSDDSLLITYGTSDQLLIKDGLAGSIG 1430
Query: 261 --------TIAQHTVIESVV---------------GSSGNDVVIGNSANNVFFESSGNDV 297
T++ +I +V G S D + + F G+D
Sbjct: 1431 HYRFANGETLSYSELIGRLVDTPMGAASGGRRFWFGGSLGDYLTATDGHTTFSGGRGDDT 1490
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAI---------IVYDANEHKQDFLS--------- 339
G G +T+ Y +I + D +
Sbjct: 1491 LIGYGGRNTYLYSRGDGTDRIIDTSAKTDADGTALPNTLRFGAGITADDIRLAIGSLKIL 1550
Query: 340 --------------------------DVERLRFADQCIDSVNVKQRSILE--YTASYEDL 371
++R FAD S + T + L
Sbjct: 1551 VGSNPDDAIHIDGFDPDDALGTKKPPAIDRFEFADGTALSYGELLARGFDLTGTTGNDTL 1610
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
D + G D G D
Sbjct: 1611 TGTSVNDRLDGGAGNDSLRGGAGSDTY-----------AWGIGSGQDSIDNTDTSAGKTD 1659
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY--L 489
A D + H++ + RF + +
Sbjct: 1660 TLVIGSGLLPADLLCGRSGDDLIVRVRTTREQVTVLKHYAGAPIDRIRFSDGSQWQASEI 1719
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
++ D R G D H T G + +A +++ D
Sbjct: 1720 DAHLDNRPTDGDDI-----HAGTSGSDRLDTLAGNDVVSGLAGDDEIAGGPGDDTLYGGE 1774
Query: 550 GKD 552
G D
Sbjct: 1775 GND 1777
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 46/360 (12%), Positives = 74/360 (20%), Gaps = 64/360 (17%)
Query: 253 IGGYEKNMTIAQHTVIES-VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G I ++ + G G+D + G + GND G G D + +
Sbjct: 2213 VTGTAGKDVINGQAGTDNRLYGFDGDDSLNGAEVADTLAGGRGNDRLAGGFGADIYLFAN 2272
Query: 312 PSYLYKIYRF----------------------------------ENAIIVYDANEHKQDF 337
I + V ++
Sbjct: 2273 GDGADVINETNDTNGTVDTLRLTDLAAAAVSELARVGSDLIVRLGGSDQVTVRQQYNAAT 2332
Query: 338 LSDVERLRFADQC----------IDSVNVKQRSILEYTAS-YEDLIQVIGQDVFESMKHF 386
+ +E++ FAD + ++ L L G D
Sbjct: 2333 SAGIEQITFADGLTWTADDIKARLSTLGTSAADSLTGFDGVGNRLFGFDGSDTLSGGDRG 2392
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G D L D L G+D G D Y
Sbjct: 2393 DLLDGGNGNDWL----EGLAGADTLVGGAGNDVYDIDDANDLIIEHAGEGRDT----AYS 2444
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
DL + G + + G + + + G
Sbjct: 2445 WVSFDLASQG--------SGVEVLTLLGSNPLGAAGNELDNVINGNAAANVLKGGAGNDT 2496
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
R Y G L + L D G D + I
Sbjct: 2497 LRAYG--GSDNLDGGSGRDDLWGGEGDDTLDGGTGDDTLSGVFGADTYLFRRGSGTDRII 2554
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 43/364 (11%), Positives = 92/364 (25%), Gaps = 62/364 (17%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY------------ 316
+++ G+D+V G + ++V GND G +G D + +
Sbjct: 2085 DTIDALGGDDLVDGLAGDDVITGGRGNDTLRGGAGSDHYRFAVGDGSDLIVDDDVTADHA 2144
Query: 317 ---KIYRFENAIIVYDANEHKQDFLSD-------------------VERLRFAD------ 348
+ ++++ + D + +E RFAD
Sbjct: 2145 DVVEFLDVASSVVTVTRPHNGNDLVLAYGGSDRLTIQAYFAGASHQIEEFRFADSVRWNV 2204
Query: 349 --------------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ + + + L + L D + G
Sbjct: 2205 GDLQERVLVTGTAGKDVINGQAGTDNRLYGFDGDDSLNGAEVADTLAGGRGNDRLAGGFG 2264
Query: 395 RDIT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
DI F + ++ + G+ V E + + S + +
Sbjct: 2265 ADIYLFANGDGADVINETNDTNGTVDTLRLTDLAAAAVSELARVGSDLIVRLGGSDQVTV 2324
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
+A + + F++ + S D F +
Sbjct: 2325 RQQYNAATSAGIEQITFADGLTWTADDIKARLSTLGTSAADSLTGFDGVGNRLFGFDGSD 2384
Query: 514 GVKEGRNPD------AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
+ G D LE +A + L+ + + D EGR +
Sbjct: 2385 TLSGGDRGDLLDGGNGNDWLEGLAGADTLVGGAGNDVYDIDDANDLIIEH-AGEGRDTAY 2443
Query: 568 NPDL 571
+
Sbjct: 2444 SWVS 2447
Score = 47.1 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 84/280 (30%), Gaps = 15/280 (5%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D+ D D+ + +D + G + IA +++ G GND + G
Sbjct: 1724 DNRPTDGDDIHAGTSGSDRLDTLAG-NDVVSGLAGDDEIAGGPGDDTLYGGEGNDRLSGG 1782
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
++ +G+D DG +G D + Y R + + + + + + +
Sbjct: 1783 DGDDDLTGGAGDDSLDGGAGADRLAGGSGGDTYLFGRGDGSDRIVEGGDR-----TSTDV 1837
Query: 344 LRFADQCIDSVN----VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+R + + S +++ + + L E E ++
Sbjct: 1838 IRLSAGVLPSDLKLSRQGNDLVIDILGTTDRLTVADAYAPGGGPTAGIERIDFEATATSW 1897
Query: 400 DSYLYLGSYDDLRNVFGSD-----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
+ L G+D AA R Y G L+ A + L+
Sbjct: 1898 TAKDILARLLADAATAGNDVIVGVPDAANRIYGLDGNDRLTGGGLADTLDGGAGADSLVG 1957
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
A D L G D + + F S D
Sbjct: 1958 ADGDDLLLGGSGDDFVNGGAGSDTYFWGLGSGNDTVDNSD 1997
Score = 40.5 bits (93), Expect = 0.87, Method: Composition-based stats.
Identities = 33/321 (10%), Positives = 67/321 (20%), Gaps = 40/321 (12%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
G + D G +I G+ P
Sbjct: 1073 GGADLMFGGAGNDWLFAGPGDDFVDGGADDDVAFGGEGNDQIYGGRGVDILSGDEPADPD 1132
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK--IYGAPKGSLGN 204
+ + + +D ++ G G
Sbjct: 1133 DPTRGLPGILHGSDYLDGGDGNDHLSGNGNGDRLFGGAGNDQISGDDGLTPGEYHGRDYL 1192
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-------------IDLNTESWS 251
+ + + ++ G+D L Y +
Sbjct: 1193 DGGDGDDRLWGDGNDDGLFGGAGNDRLKGDNRVTAGEYHGRDTLDGGDGDDSLWGDGADD 1252
Query: 252 SIGGYEKNMTIAQHT--------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ G N + +++ G +G D +IG N+ + G+DV G
Sbjct: 1253 ELIGGVGNDYLDGDDPTLDSRYHGRDTLDGGAGKDSLIGGGGNDELYGGQGDDVLAGDDT 1312
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT + + + D L + LE
Sbjct: 1313 PDTPLATSAHGDDLLDG--GSGNDGLRGGGGADTL---------------IGGTGTDYLE 1355
Query: 364 YTASYEDLIQVIGQDVFESMK 384
A + + G ++
Sbjct: 1356 GGAGDDIYLFAAGDSPRDADD 1376
>gi|182677511|ref|YP_001831657.1| hypothetical protein Bind_0516 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633394|gb|ACB94168.1| hypothetical protein Bind_0516 [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 592
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 17/121 (14%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F Y+A + D+ +A P HF +G+ E R+ + F+ + YL +Y D+
Sbjct: 72 FDKSYYLAKNTDVRDAN-IDPL------KHFLIWGWRERRNPSLSFDVNFYLQTYPDVAA 124
Query: 582 VFGSDRSAAAQHYITHGMKEGRA----LGISGMQFKSVMNLSEKSRDKADLSLSFDHKKV 637
H+I G EGR LGI + ++ S+ + + + D
Sbjct: 125 A----DVNPLIHFIMAGQAEGREARDPLGIWRRRLEAARAPSKGGTAASLNNQAVDQIDG 180
Query: 638 D 638
D
Sbjct: 181 D 181
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 54/151 (35%), Gaps = 18/151 (11%)
Query: 420 GAAARHYITHGVK-EGRNPDAFKALEYIASHEDLINAF-----ADAPDLVQVGKDHFSNF 473
++ +++ + + + AS ED++ A +D +
Sbjct: 3 ASSKASWLSRWFRLKHYSAAIDATSIEGASIEDVLAVSEEGVLAAVTTEKVPPEDLLVDH 62
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIAS 532
E FD YL D+R+ +H++ G +E RNP +F Y+ +
Sbjct: 63 HHLEIAAPYFDKSYYLAKNTDVRDA----NIDPLKHFLIWGWRERRNPSLSFDVNFYLQT 118
Query: 533 HEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ D+ A P + HF G EGR
Sbjct: 119 YPDVAAAD-VNPLI------HFIMAGQAEGR 142
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 13/86 (15%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F Y+A + D+ +A D HF +G E R + FD YL +Y D+
Sbjct: 72 FDKSYYLAKNTDVRDANIDP-------LKHFLIWGWRERRNPSLSFDVNFYLQTYPDVAA 124
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA 523
H+I G EGR
Sbjct: 125 A----DVNPLIHFIMAGQAEGREARD 146
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 14/133 (10%)
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS----VNVKQRSILEYT 365
Y+ + + V +E E++ D +D + Y
Sbjct: 19 YSAAIDATSIEGASIEDVLAVSEEGVLAAVTTEKVPPEDLLVDHHHLEIAAPYFDKSYYL 78
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAA 423
A D+ + +KHF +G E R+ + FD YL +Y D+
Sbjct: 79 AKNTDVRDAN----IDPLKHFLIWGWRERRNPSLSFDVNFYLQTYPDVAAA----DVNPL 130
Query: 424 RHYITHGVKEGRN 436
H+I G EGR
Sbjct: 131 IHFIMAGQAEGRE 143
Score = 47.1 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 5/63 (7%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS-GMQFKSVMNLSEKSR 623
F+ YL D+ + +H++ G +E R +S + F +
Sbjct: 70 PYFDKSYYLAKNTDVRDA----NIDPLKHFLIWGWRERRNPSLSFDVNFYLQTYPDVAAA 125
Query: 624 DKA 626
D
Sbjct: 126 DVN 128
>gi|91775702|ref|YP_545458.1| hemolysin-type calcium-binding region [Methylobacillus flagellatus
KT]
gi|91709689|gb|ABE49617.1| Hemolysin-type calcium-binding region [Methylobacillus flagellatus
KT]
Length = 744
Score = 74.1 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 67/182 (36%), Gaps = 5/182 (2%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
LD + G N I + + +I G N I + ++G GND++ G N+V
Sbjct: 27 LDNFIDGDSGNDIIIAGDGNDTIFGGNGNDIIFGGNGDDFIIGGDGNDIIFGGDGNDVID 86
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF-ADQ 349
GN+V G SG D + A + I+ + +++ D LS E +
Sbjct: 87 AGDGNNVVFGGSGNDNIY--AGAGNDTIFGGDGNDVIFAG--DGDDLLSGGEGTDYIEGG 142
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ + + A + LI G D F F + +G D+ Y
Sbjct: 143 GSTAGDETIDGNVYLVAPDDVLIGGSGNDTFRISDEFEGLTIIQGGVSNLDNSGNPARYI 202
Query: 410 DL 411
D+
Sbjct: 203 DI 204
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 10/182 (5%)
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+++++E SD + + + I+ + + G D+
Sbjct: 5 IFNSSETSYTGTSDSDIIIGNNLDNFIDGDSGNDIIIAGDGNDTIFGGNGNDIIFGGNGD 64
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
+G DI F G +D+ + + + N F
Sbjct: 65 DFIIGGDGNDIIFG-----GDGNDVIDAGDGNNVVFGGSGNDNIYAGAGNDTIFGGD--- 116
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
D+I A L + G T D +YL + DD+ +
Sbjct: 117 --GNDVIFAGDGDDLLSGGEGTDYIEGGGSTAGDETIDGNVYLVAPDDVLIGGSGNDTFR 174
Query: 507 AR 508
Sbjct: 175 IS 176
Score = 39.8 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 22/177 (12%), Positives = 48/177 (27%), Gaps = 17/177 (9%)
Query: 311 APSYLYKIYRFENAIIVYDAN-EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S ++ I+ N ++ D S + + D I+ +
Sbjct: 6 FNSSETSYTGTSDSDIIIGNNLDNFIDGDSGNDIIIAGDGNDTIFGGNGNDIIFGGNGDD 65
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAAR- 424
+I G D+ +G ++ F + +Y G+ +D + A
Sbjct: 66 FIIGGDGNDIIFGGDGNDVIDAGDGNNVVFGGSGNDNIYAGAGNDTIFGGDGNDVIFAGD 125
Query: 425 -----------HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
YI G + + +A + LI + + +
Sbjct: 126 GDDLLSGGEGTDYIEGGGSTAGDETIDGNVYLVAPDDVLIGGSGNDTFRISDEFEGL 182
>gi|126725564|ref|ZP_01741406.1| type I secretion target repeat protein [Rhodobacterales bacterium
HTCC2150]
gi|126704768|gb|EBA03859.1| type I secretion target repeat protein [Rhodobacterales bacterium
HTCC2150]
Length = 620
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/219 (12%), Positives = 58/219 (26%), Gaps = 18/219 (8%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPF-IQTIYDSGGDDLLDLTLI-------GGVKNY 242
++G + +Y + I D+ G L N
Sbjct: 132 NDYLFGGEGT---DTLYGGDGNDSAYGGEGDDIIDTSGPSPLPDIGYPGLYPGDSDPTND 188
Query: 243 IDLNTES--WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+D +I + + +I T +++ +D + G ++ G+D+ G
Sbjct: 189 LDFVDGGAGDDTITTGDDDDSIIGGTGNDNINAGFDDDTIDGGEGDDYIVGGEGSDLIYG 248
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVK 357
DT + + A + D + E + D + +
Sbjct: 249 GDDDDTIY--GGLSPIFPDAVNITDDIDLAPNNGIDLVYGGEGNDTIFGQDDTDELHGDE 306
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
L + L G D + E + D
Sbjct: 307 GDDYLNGGIDNDTLYGGAGSDTLIGGQGEDEQYGGDDAD 345
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/320 (15%), Positives = 79/320 (24%), Gaps = 37/320 (11%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+ + + +++ + GND D G D F Y + ++ E +
Sbjct: 33 QGDTIDGADGLDDLIYGYGGNDTIDAGLGQD-FVYGGTGDDDINGNDGDDVLYGGDPEGE 91
Query: 335 QDF-------LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D D+E D V++ L + L G D
Sbjct: 92 ADEDVEFAVPAIDIEEPETCDDDHPPVDLTDNDTLTGGDGNDYLFGGEGTDTLYGGDGND 151
Query: 388 EFGLSEGRDITFD-----------SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
EG DI LY G D ++ D GA T +
Sbjct: 152 SAYGGEGDDIIDTSGPSPLPDIGYPGLYPGDSDPTNDLDFVDGGAGDDTITTGDDDDSII 211
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE-----GRFVTFDSYLYLGS 491
+D I+ +V G ++ G F + +
Sbjct: 212 GGTGNDNINAGFDDDTIDGGEGDDYIVGGEGSDLIYGGDDDDTIYGGLSPIFPDAVNITD 271
Query: 492 YDDLRNVFGSDRG-------------AAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
DL G D + G L A + LI
Sbjct: 272 DIDLAPNNGIDLVYGGEGNDTIFGQDDTDELHGDEGDDYLNGGIDNDTLYGGAGSDTLIG 331
Query: 539 AFADAPDLVQAGKDHFSNFG 558
+ D+F+ G
Sbjct: 332 GQGEDEQYGGDDADNFTVSG 351
Score = 54.4 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/358 (13%), Positives = 90/358 (25%), Gaps = 69/358 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ +G D + + + + ID I GY N TI + V G +G+D +
Sbjct: 16 VDGTGCPDDMPIGYVDAQGDTIDGADGLDDLIYGYGGNDTIDAGLGQDFVYGGTGDDDIN 75
Query: 282 GNSANNVFFESS----------------------------------GNDVFDGSSGLDTF 307
GN ++V + ND G G D
Sbjct: 76 GNDGDDVLYGGDPEGEADEDVEFAVPAIDIEEPETCDDDHPPVDLTDNDTLTGGDGND-- 133
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEH----------------------KQDFLSDVERLR 345
+ + +Y + Y D +D++ +
Sbjct: 134 YLFGGEGTDTLYGGDGNDSAYGGEGDDIIDTSGPSPLPDIGYPGLYPGDSDPTNDLDFVD 193
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DS 401
+ +++ D + + EG D+ + D
Sbjct: 194 GGAGDDTITTGDDDDSIIGGTGNDNINAGFDDDTIDGGEGDDYIVGGEGSDLIYGGDDDD 253
Query: 402 YLYLGSY---DDLRNVFGSDRGAAARHYITHGVKEGRNP----DAFKALEYIASHEDLIN 454
+Y G D N+ A EG + D L + L
Sbjct: 254 TIYGGLSPIFPDAVNITDDIDLAPNNGIDLVYGGEGNDTIFGQDDTDELHGDEGDDYLNG 313
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
+ G D E+ ++ D+ + S + D G Y T
Sbjct: 314 GIDNDTLYGGAGSDTLIGGQGEDEQYGGDDADNFTVSGPSGGDGDAIDGGTGGNDYDT 371
>gi|300863503|ref|ZP_07108456.1| hypothetical protein OSCI_20002 [Oscillatoria sp. PCC 6506]
gi|300338492|emb|CBN53598.1| hypothetical protein OSCI_20002 [Oscillatoria sp. PCC 6506]
Length = 1451
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 42/380 (11%), Positives = 79/380 (20%), Gaps = 16/380 (4%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ FIQ I + +++L + + + + G ++
Sbjct: 484 PTTNINSFIQFIQQNQLTVIINLPGNIPGNDNPETPQQGDITWTGTNGPDRKQGFAGNDN 543
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G GND + N+ GND DG G DT ++ + +
Sbjct: 544 FDGRGGNDFLFSGPGNDFLQGGEGNDFLDGEQGNDTLV--GGPDNDTLWGGQGNDSLLGG 601
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ L L + L G D + F
Sbjct: 602 AGND--------FLLGEQGEDTLKGEAGNDTLLGAQGTDLLEGGEGNDSLSGGEGADVFV 653
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
S S G+ + + A+
Sbjct: 654 FGTNVGSDIISDFVSSSDKLQITSSGTVSVSFTGSSAVLNLNNNGTITLLGVTSLGANDI 713
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
++ + + F + A
Sbjct: 714 QILGGGSVIGLTSSTPNLTTVTGYGDYSTFTG----PIFFDGSTGTGGSVTGTAFADIFS 769
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
G + + + AG D F G + F
Sbjct: 770 GGSGADIFNGGSGADLFYGGSGADIFSGGAGNDTFNGGAGDDTF--TGGDGADVFVFGTT 827
Query: 571 LYLTSYDDLWNVFGSDRSAA 590
+ L +D+ + F S
Sbjct: 828 VGLNEGNDIISDFVSSTDKL 847
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 63/468 (13%), Positives = 100/468 (21%), Gaps = 92/468 (19%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G+D L +GG N + S+ G N +
Sbjct: 558 GNDFLQGGEGNDFLDGEQGNDTL----VGGPDNDTLWGGQGNDSLLGGAGNDFLLGEQGE 613
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR-------- 320
+++ G +GND ++G ++ GND G G D F + I
Sbjct: 614 DTLKGEAGNDTLLGAQGTDLLEGGEGNDSLSGGEGADVFVFGTNVGSDIISDFVSSSDKL 673
Query: 321 -----------FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN-------------- 355
F + V + N + L V L D I
Sbjct: 674 QITSSGTVSVSFTGSSAVLNLNNNGTITLLGVTSLGANDIQILGGGSVIGLTSSTPNLTT 733
Query: 356 ----------------------------VKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
I + + G D+F
Sbjct: 734 VTGYGDYSTFTGPIFFDGSTGTGGSVTGTAFADIFSGGSGADIFNGGSGADLFYGGSGAD 793
Query: 388 EFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
F G D D G D+ + I+ V +
Sbjct: 794 IFSGGAGNDTFNGGAGDDTFTGGDGADVFVFGTTVGLNEGNDIISDFVSSTDKLQITSSG 853
Query: 444 EYIASHEDLIN-------AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
S + +G G +T + L +Y D
Sbjct: 854 TVSVSFTGSSAVLNLNNNGTLTLLGVTSLGASDIEILGGGSVIGLTSATQTTLAAYGDYS 913
Query: 497 NVFG--------------SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
G + A G A + D
Sbjct: 914 TFTGPIFFDGSTGTGGSVTGTAFADIFSGGSGADNFSGGSGADLFYGGAGADTFSGGAGD 973
Query: 543 APDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
AG D S G + F + L D + F +
Sbjct: 974 DTFSGGAGND--SLSGGDGADVFVFGTTVGLNEGSDTISGFATGTDKL 1019
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 69/583 (11%), Positives = 128/583 (21%), Gaps = 89/583 (15%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI- 128
F + I + S + D + G G T +
Sbjct: 764 FADIFSGGSGADIFNGGSGADLFYGGSGADIFSGGAGNDTFNGGAGDDTFTGGDGADVFV 823
Query: 129 -GHALGLMHPGSYNGGYPVYGVDNDYEND---SFLTSVMSYFMPQDSMMDASFGYCATPM 184
G +GL + + S + S + ++ + +
Sbjct: 824 FGTTVGLNEGNDIISDFVSSTDKLQITSSGTVSVSFTGSSAVLNLNNNGTLTLLGVTSLG 883
Query: 185 VSDIVAV---------------QKIYGAPKGSLG----NNIYKIEVQQKDSPFIQTIYDS 225
SDI + YG G + + F
Sbjct: 884 ASDIEILGGGSVIGLTSATQTTLAAYGDYSTFTGPIFFDGSTGTGGSVTGTAFADIFSGG 943
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI---- 281
G D GG + + G + T + +S+ G G DV +
Sbjct: 944 SGADNF----SGGSGADLFYGGAGADTFSGGAGDDTFSGGAGNDSLSGGDGADVFVFGTT 999
Query: 282 --GNSANNVFFESS-GNDVF-DGSSGLDTFFYYAPSY----------------------- 314
N ++ + G D SSG + +
Sbjct: 1000 VGLNEGSDTISGFATGTDKLQITSSGTVSVSFSGGDAVLNLNNNGTVTLLGVTSLGTSDI 1059
Query: 315 ----------------------LYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQ 349
Y Y I +D + ++ + +
Sbjct: 1060 QILGGGSLIGLTSTTATQTTLTAYGDYSTFTGPIFFDGSSTTGGSVTGTAFADIFKGGSG 1119
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSY 408
+ + A + +G D F + +G D+ F + + L
Sbjct: 1120 ADNFSGGSGADLFYGGAGADTFSGGLGDDTFTGGEGNDSLSGGDGADVFVFGTTVGLNEG 1179
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
D + F + DA L + L D+ +G
Sbjct: 1180 SDTISGFATGTDKLQITSSGTVSVSFSGGDAVLNLNNNGTVTLLGVTSLGTSDIQILGGG 1239
Query: 469 HFSNFGCEEGRFVTFDSYL---YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
S +TF++ Y S + F G + +
Sbjct: 1240 SLSTTTAANTTPITFNASAPGVYDFSGSTVAVNFVGSSGINNVTATAY-ADTLYGFEGDD 1298
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
+ + + AG D F EG +
Sbjct: 1299 IFNGGSGADIISGGSGADLLTGGAGNDVFVYSSTSEGGDTITD 1341
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/523 (11%), Positives = 104/523 (19%), Gaps = 88/523 (16%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI- 128
F + S + D + G G ++ +
Sbjct: 936 FADIFSGGSGADNFSGGSGADLFYGGAGADTFSGGAGDDTFSGGAGNDSLSGGDGADVFV 995
Query: 129 -GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
G +GL G+ + ++ S ++ +
Sbjct: 996 FGTTVGLNEGSDTISGFATGTDKLQITSSGTVSVSFSGGDAVLNLNNNGTVTLLGVTSLG 1055
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+Q + G L + + G D + G T
Sbjct: 1056 TSDIQILGGGSLIGLTSTTATQTTLTAYGDYSTF----TGPIFFDGSSTTGGSVT---GT 1108
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
G + + + G +G D G ++ F GND G G D F
Sbjct: 1109 AFADIFKGGSGADNFSGGSGADLFYGGAGADTFSGGLGDDTFTGGEGNDSLSGGDGADVF 1168
Query: 308 FYYA-----------------------PSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ S F V + N + L V L
Sbjct: 1169 VFGTTVGLNEGSDTISGFATGTDKLQITSSGTVSVSFSGGDAVLNLNNNGTVTLLGVTSL 1228
Query: 345 RFADQCIDSVNVKQR--------------------------------------------- 359
+D I
Sbjct: 1229 GTSDIQILGGGSLSTTTAANTTPITFNASAPGVYDFSGSTVAVNFVGSSGINNVTATAYA 1288
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD- 418
L + G D+ G D+ F D + + D
Sbjct: 1289 DTLYGFEGDDIFNGGSGADIISGGSGADLLTGGAGNDV-FVYSSTSEGGDTITDFVTGDV 1347
Query: 419 ---RGAAARHYITHGVKEGRNPD------AFKALEYIASHEDLINAFADAPDLVQVGKDH 469
A + + + N F +AS L A
Sbjct: 1348 LRFSSANFGGFTSIIYQAAANTSVSVVDVNFVDFSGVASITSLAQAIDQFAVQSGASGPA 1407
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
F + G + FDS F AA ++
Sbjct: 1408 FILYNSGAGSALAFDSNGTTAGGGFNITNFSGVVTLAANNFTL 1450
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 50/404 (12%), Positives = 97/404 (24%), Gaps = 27/404 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G G++ + F T+ + G+D++ + K I ++ + S
Sbjct: 805 NGGAGDDTFTGGDGADVFVFGTTVGLNEGNDIISDFVSSTDKLQI-TSSGTVSVSFTGSS 863
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + +++G V A+++ G+ + S+ T Y +
Sbjct: 864 AVLNLNNNGTLTLLG------VTSLGASDIEILGGGSVIGLTSATQTTLAAYGDYSTFTG 917
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
F + + F + + + A + G D
Sbjct: 918 PIFFDGSTGTGGSVTGTAFA---DIFSGGSGADNFSGGSGADLFYGGAGADTFSGGAGDD 974
Query: 379 VFESMKHFYEFGLSEGRDI-TFDSYLYLGSYDDLRNVFGSD---------RGAAARHYIT 428
F +G D+ F + + L D + F + +
Sbjct: 975 TFSGGAGNDSLSGGDGADVFVFGTTVGLNEGSDTISGFATGTDKLQITSSGTVSVSFSGG 1034
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
V N L + I + G + TF ++
Sbjct: 1035 DAVLNLNNNGTVTLLGVTSLGTSDIQILGGGSLIGLTSTTATQTTLTAYGDYSTFTGPIF 1094
Query: 489 LGSYDDLRNVFGSDRGAAARHYIT--HGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
GS G A G A + D
Sbjct: 1095 FDGSS---TTGGSVTGTAFADIFKGGSGADNFSGGSGADLFYGGAGADTFSGGLGDDTFT 1151
Query: 547 VQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
G D S G + F + L D + F +
Sbjct: 1152 GGEGND--SLSGGDGADVFVFGTTVGLNEGSDTISGFATGTDKL 1193
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 61/337 (18%), Positives = 120/337 (35%), Gaps = 15/337 (4%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--D 396
++F + S + S + ++ + +HF ++G+ EGR
Sbjct: 4 VGEHFIKFGIKQELSFSAIFESEFYLKKYPGVKEAIDKGEIKSAAEHFLKYGMEEGRICT 63
Query: 397 ITFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
FD Y Y D+ + +A + ++ G EG +P+A L Y +
Sbjct: 64 SLFDKNYYKAKYPDVDDKIKKGKFKSAFQQWLKEGYFEGFSPNALIDLSYYEQENPGADK 123
Query: 456 FADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY-IT 512
D F G +EG FD Y + + ++ S + ++ Y +
Sbjct: 124 DIK-SGKFINLLDQFLKKGLKEGFSANAIFDIEFYGEKHSEAKDAVKSGKYSSLFEYFLK 182
Query: 513 HGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNP 569
G+++G + F Y H + + A + ++F G +G + F+
Sbjct: 183 EGLQKGDISTSLFDEEFYKEQHPEALEAVKS--GKYKTIFEYFLQEGMVKGDNPNALFDT 240
Query: 570 DLYLTSYDDLWNVFGSDRS-AAAQHYITHGMKEG-RALGISGMQFKSVMNLSEKSRDKAD 627
+ YL S + S + A ++++ GM +G + F N + K+
Sbjct: 241 EFYLDSDSEAATAIRSGKYKNALEYFLKVGMAKGDTTSPLFDADFYLETNAEASAAVKSG 300
Query: 628 LSLS-FDHKKVDLYTDYFGDGNYYDSDLYSMHDINHD 663
S F++ + +D D YS +I+ D
Sbjct: 301 KYKSAFEYFLKVGFGKGDIPTALFDGDFYSQQNIDVD 337
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 54/300 (18%), Positives = 99/300 (33%), Gaps = 15/300 (5%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYD 409
D E L V ++F + G+ +G + FD+ YL S
Sbjct: 189 DISTSLFDEEFYKEQHPEALEAVKSGKYKTIFEYFLQEGMVKGDNPNALFDTEFYLDSDS 248
Query: 410 DLRNVF-GSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGK 467
+ A +++ G+ +G F A Y+ ++ + A
Sbjct: 249 EAATAIRSGKYKNALEYFLKVGMAKGDTTSPLFDADFYLETNAEASAAVKSGKYKSAFEY 308
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDL-RNVFGSDRGAAARHYITHGVKEGRNPDAF-K 525
FG + FD Y D+ ++ G H++ G+KEG N +
Sbjct: 309 FLKVGFGKGDIPTALFDGDFYSQQNIDVDIDIKGGKFKNKFEHFLKKGIKEGLNFNPLID 368
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVF 583
YI + ++ + +H G +E I+ F+ D Y+ +L +
Sbjct: 369 VNFYIQQNAEVD--IDIKAGKFKNKIEHLLKKGLKEDLKISVWFDKDFYIKQGSELGDRI 426
Query: 584 GSDRSA-AAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTD 642
G + A +I+ G+ E + S + F V + + + S F K D
Sbjct: 427 GKGKFKSAFYDFISKGIFEDK----SPISFFDVAYYRQNFKVEGKSSFLFFLKTGAARGD 482
Score = 44.4 bits (103), Expect = 0.066, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 55/145 (37%), Gaps = 9/145 (6%)
Query: 465 VGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRNP 521
+HF FG ++ F+S YL Y ++ + +AA H++ +G++EGR
Sbjct: 3 SVGEHFIKFGIKQELSFSAIFESEFYLKKYPGVKEAIDKGEIKSAAEHFLKYGMEEGRIC 62
Query: 522 DA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDD 578
+ F Y A + D+ + ++ + GY EG S + Y
Sbjct: 63 TSLFDKNYYKAKYPDVDDKIK--KGKFKSAFQQWLKEGYFEGFSPNALIDLSYYEQENPG 120
Query: 579 LWNVFGSD-RSAAAQHYITHGMKEG 602
S ++ G+KEG
Sbjct: 121 ADKDIKSGKFINLLDQFLKKGLKEG 145
>gi|227423|prf||1703414A metalloprotease
Length = 488
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 62/199 (31%), Gaps = 60/199 (30%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEET 73
L W + Y+ + QE R AL WS V LTF E
Sbjct: 100 LSGGRWEKTDLTYRILRFPWQLV-----------QEQVRQTMAEALKVWSDVTPLTFTEV 148
Query: 74 SIH-SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
+DI + + P+ +++FD + W G +G
Sbjct: 149 HEGRADIMIDFARYWDGDDLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGDDQG 206
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T L A HE GH LGL H + ++MS F +F
Sbjct: 207 TDLLQVAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTF 239
Query: 178 GYCATPMVSDIVAVQKIYG 196
Y + D VQ +YG
Sbjct: 240 RYPLSLSPDDCRGVQHLYG 258
>gi|126730970|ref|ZP_01746779.1| type I secretion target repeat protein [Sagittula stellata E-37]
gi|126708686|gb|EBA07743.1| type I secretion target repeat protein [Sagittula stellata E-37]
Length = 1044
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 73/509 (14%), Positives = 140/509 (27%), Gaps = 35/509 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFME--INFDKADVWRYGIGKGTILSHNALHEIGH-A 131
D ++S + + + ++ + G T ++ L G A
Sbjct: 269 GEGDDTLVASTGATADILDGGADADLLLISDIATGEMLKGGETVTTGSDNDTLDASGFTA 328
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G+ + + G + N+ V++ D++ + T D
Sbjct: 329 TGIEFTFNADEGGYLGDGTNNGTFSGIEHFVLT--DQDDTVDASVSSVDLTFDALDGNDS 386
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLN 246
+G + + TI GDDL+ D +LIGG +
Sbjct: 387 IVAGTGDDSVVGGT---GNDTLRGAAGNDTIEGGAGDDLIAGNSGDDSLIGGDGSDSLYG 443
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
E + G + + T+ + +++ G +GND + G+ N++ + +G+D G G DT
Sbjct: 444 EEGADFVSGGDGDDTVEGNEGNDTLYGGAGNDWMRGSYENDILYGGAGDDYLWGGWGDDT 503
Query: 307 FFYYAPSYLYKIYR---FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ----R 359
F + E V D + D D+ L +
Sbjct: 504 FIIENGFGNDTVDAEGVAETNGDVLDLSAVTDDLTIDLSNLHPEMGAVTDGTSTLVFDEV 563
Query: 360 SILEYTASYED--LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ + L G DV + G +G D G DD
Sbjct: 564 ETIVLGSGANTLKLADGSGADVISGFDGPIDNG--DGTYTGQDQLDVSGLTDDWGLPVSV 621
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ + N + L ++A +
Sbjct: 622 EDVVVSDTNGDGTGDAILNFPSGDTLVLTGLTAAQVSAPEALQAMGIPAFAGDYVVEGTA 681
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
G + D+ D + + + ++ A ++ +
Sbjct: 682 GDDI-IDAGYTGDPDGDHVDDGDAADFSDDDSIEA--------GAGNDSIVAGAGNDTVN 732
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
D L G D +G E SI
Sbjct: 733 AGEGDDTVLGGDGYD--DLYGLEGADSID 759
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/406 (13%), Positives = 102/406 (25%), Gaps = 58/406 (14%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
+ F + + + +E+ L LTF + + I+
Sbjct: 171 VTVTFSGSEAGSASDGTDTLSFSEIEAVRATGYDDTLDGSLSGAALTFLAGAGNDSIRGG 230
Query: 83 SSNNGY-----VCTPRYDSRYFMEINFD---KADVWRYGIGKGTILSHNALHEIGHALGL 134
+ T + I AD G G T+++
Sbjct: 231 DGGDVIDGGAGADTIVGGAGNDSLIGGSAGTGADEISGGEGDDTLVASTG---------- 280
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ + D +D ++ + D + + I
Sbjct: 281 ---ATADILDGGADADLLLISDIATGEMLKGGETVTTGSDNDTLDASGFTATGIE----- 332
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ I+ + DD +D ++ + L
Sbjct: 333 --FTFNADEGGYLGDGTNNGTFSGIEHFVLTDQDDTVDASVSSVDLTFDAL--------- 381
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ N +I T +SVVG +GND + G + N+ +G+D+ G+SG D+
Sbjct: 382 --DGNDSIVAGTGDDSVVGGTGNDTLRGAAGNDTIEGGAGDDLIAGNSGDDSLI--GGDG 437
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+Y E A V D + L A + +
Sbjct: 438 SDSLYGEEGADFVSGG-----------------DGDDTVEGNEGNDTLYGGAGNDWMRGS 480
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
D+ G D + D V ++
Sbjct: 481 YENDILYGGAGDDYLWGGWGDDTFIIENGFGNDTVDAEGVAETNGD 526
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 50/379 (13%), Positives = 87/379 (22%), Gaps = 59/379 (15%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSI---GGYEKNMTIAQHTVIESVVGSSGNDVVI 281
S G + G L + S G + T+ +S+ G +G+D +
Sbjct: 51 SDGVTTFSIGDAGSTGTDAQLGSGSVDFFDGQFGTAGDDTLDGGAGNDSLNGQAGDDSIT 110
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN------------------ 323
G + ++ +G+D G D F + E
Sbjct: 111 GGTGDDTLIGGAGDDQLFGQDDGDFFRVEDGFGADTVVGGEGVSAGTDFDTLDLSALTSG 170
Query: 324 -----AIIVYDANEHKQDFL--SDVERLRFADQCIDSVNVKQRSILEYTAS--------- 367
+ + D L S++E +R + L + A
Sbjct: 171 VTVTFSGSEAGSASDGTDTLSFSEIEAVRATGYDDTLDGSLSGAALTFLAGAGNDSIRGG 230
Query: 368 -----------YEDLIQVIGQDVF---ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ ++ G D + E EG D S D
Sbjct: 231 DGGDVIDGGAGADTIVGGAGNDSLIGGSAGTGADEISGGEGDDTLVASTGATADILD--- 287
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
G+D I G E D A + +
Sbjct: 288 -GGADADLLLISDIATG--EMLKGGETVTTGSDNDTLDASGFTATGIEFTFNADEGGYLG 344
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
+ + L DD + S G ++ +
Sbjct: 345 DGTNNGTFSGIEHFVLTDQDDTVDASVSSVDLTFD--ALDGNDSIVAGTGDDSVVGGTGN 402
Query: 534 EDLINAFADAPDLVQAGKD 552
+ L A + AG D
Sbjct: 403 DTLRGAAGNDTIEGGAGDD 421
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 41/140 (29%), Gaps = 4/140 (2%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ + + T G + I+ + S + G N
Sbjct: 670 AFAGDYVVEGTAGDDIIDAGYTGDPDGDHVDDGDAADFSDDDSIEAGAGNDSIVAG-AGN 728
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ ++V+G G D + G + +G+D SG DT + +
Sbjct: 729 DTVNAGEGDDTVLGGDGYDDLYGLEGADSIDGGTGDDTIHAGSG-DTAVGGDGDDTFFVS 787
Query: 320 RFE--NAIIVYDANEHKQDF 337
+ A + E +
Sbjct: 788 ASDVNGAPLTIVGGEAGETT 807
Score = 39.0 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 34/326 (10%), Positives = 79/326 (24%), Gaps = 15/326 (4%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
++ R + D G G T + N
Sbjct: 460 EGNEGNDTLYGGAGNDWMRGSYENDILYGGAGDDYLWGGWGDDTFIIENGFGNDT----- 514
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+D D + + ++ D + +T + ++ +
Sbjct: 515 -VDAEGVAETNGDVLDLSAVTDDLTIDLSNLHPEMGAVTDGT----STLVFDEVETIVLG 569
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY--IDLNTESWSS 252
GA L + + D P G D LD++ + + +
Sbjct: 570 SGANTLKLADGSGADVISGFDGPIDNGDGTYTGQDQLDVSGLTDDWGLPVSVEDVVVSDT 629
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTFFYY 310
G + + + V+ V A +G+ V +G++G D
Sbjct: 630 NGDGTGDAILNFPSGDTLVLTGLTAAQVSAPEALQAMGIPAFAGDYVVEGTAGDDIIDAG 689
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + +++ + + + + + + Y+D
Sbjct: 690 YTGDPDGDHVDDGDAAD-FSDDDSIEAGAGNDSIVAGAGNDTVNAGEGDDTVLGGDGYDD 748
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRD 396
L + G D + G
Sbjct: 749 LYGLEGADSIDGGTGDDTIHAGSGDT 774
Score = 38.6 bits (88), Expect = 3.2, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 64/261 (24%), Gaps = 25/261 (9%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + + I + DA D + F D L+
Sbjct: 38 SVDVDLATNMVTISDGVTTFSIGDAGSTGTDAQLGSGSVDFFDGQF---GTAGDDTLDGG 94
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A + L G D G D F G + + + FG+D
Sbjct: 95 AGNDSLNGQAGDDSITGGTGDDTLIGGAGDDQLFGQDD--GDFFRVEDGFGADTVV---- 148
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAF-ADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
G + F L+ A + F G D S E R +D
Sbjct: 149 ----GGEGVSAGTDFDTLDLSALTSGVTVTFSGSEAGSASDGTDTLSFSEIEAVRATGYD 204
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
L GS GAA G R D ++ A + ++ +
Sbjct: 205 DTL-----------DGSLSGAALTFLAGAGNDSIRGGDGGDVIDGGAGADTIVGGAGNDS 253
Query: 545 DLVQAGKDHFSNFGYEEGRSI 565
+ + EG
Sbjct: 254 LIGGSAGTGADEISGGEGDDT 274
>gi|119490529|ref|ZP_01622971.1| hypothetical protein L8106_07856 [Lyngbya sp. PCC 8106]
gi|119453857|gb|EAW35013.1| hypothetical protein L8106_07856 [Lyngbya sp. PCC 8106]
Length = 716
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 41/320 (12%), Positives = 85/320 (26%), Gaps = 15/320 (4%)
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
I ++ + F D G T+ G
Sbjct: 336 NVIDGSDNADDIVAGSLGSDVVFAFGGDDRIEAFDGNDTMYGGVGNDLQFGNQGNDFILG 395
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
+G + G + + + + + D G ++ +G
Sbjct: 396 GDGRDTLIGTEGNNGLAASANVEDNDTLHGHGNDDLMQGGPGADLMFSGKQDDFAFGGKN 455
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-TESWSSIGGYEK 258
+ T++ G+D L + + + + + G
Sbjct: 456 ----------DDMIFGDQGNDTLHGDQGNDTLIGDTLDESEIESERGLSGMIDLLWGGAG 505
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ I +++ G GND V G +++ + +G+D+ G G D +
Sbjct: 506 DDFINGGRSNDTLSGGVGNDTVRGGKEDDLIYGEAGDDLMYGDLGNDQL--CGNEGNDTL 563
Query: 319 YRF-ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIG 376
Y + + DA + F D+ D + + L + + L G
Sbjct: 564 YGDINDNQTISDAPGRDTICGGSGNDMLFGDRDQDRLCGGEDGDTLYGGSGEDTLAGEQG 623
Query: 377 QDVFESMKHFYEFGLSEGRD 396
D + GRD
Sbjct: 624 DDWLFGDEGDDLISGGTGRD 643
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 57/338 (16%), Positives = 89/338 (26%), Gaps = 16/338 (4%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+L N ID + + + G + + + + GND + G N++ F +
Sbjct: 329 SLFNAFDNVIDGSDNADDIVAGSLGSDVVFAFGGDDRIEAFDGNDTMYGGVGNDLQFGNQ 388
Query: 294 GNDVFDGSSGLDTFFYY-APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
GND G G DT + L E+ ++ L F+ + D
Sbjct: 389 GNDFILGGDGRDTLIGTEGNNGLAASANVEDNDTLHGHGNDDLMQGGPGADLMFSGKQDD 448
Query: 353 SV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
K ++ + L G D SE L+ G+ DD
Sbjct: 449 FAFGGKNDDMIFGDQGNDTLHGDQGNDTLIGDTLDESEIESERGLSGMIDLLWGGAGDDF 508
Query: 412 RNVFGSDRGA--AARHYITHGVKEGRN--PDAFKALEYIASHEDLINAFADAPDLVQVGK 467
N S+ + G KE +A L Y D + L
Sbjct: 509 INGGRSNDTLSGGVGNDTVRGGKEDDLIYGEAGDDLMYGDLGNDQLCGNEGNDTLYGDIN 568
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
D+ GR + D Y G L
Sbjct: 569 DN-QTISDAPGRDTICGGSGNDMLFGDRDQDRLCGGEDGDTLYGGSGE---------DTL 618
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
+ L D G+D F F +I
Sbjct: 619 AGEQGDDWLFGDEGDDLISGGTGRDRFILFSGGGTDTI 656
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/250 (16%), Positives = 80/250 (32%), Gaps = 27/250 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH-EIGHALG 133
+D+ F + + + D F + D G T++ EI G
Sbjct: 436 PGADLMFSGKQDDFAFGGKNDDMIFGDQG---NDTLHGDQGNDTLIGDTLDESEIESERG 492
Query: 134 LMHPGSYNGGYPVYG-VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
L G ++ ND+ V + + D +G ++ +
Sbjct: 493 LSGMIDLLWGGAGDDFINGGRSNDTLSGGVGNDTVRGGKEDDLIYGEAGDDLMYGDLGND 552
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
++ G + GN+ ++ QTI D+ G D +
Sbjct: 553 QLCG----NEGNDTLYGDINDN-----QTISDAPGRDTI-------------CGGSGNDM 590
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + +++ G SG D + G ++ F G+D+ G +G D F ++
Sbjct: 591 LFGDRDQDRLCGGEDGDTLYGGSGEDTLAGEQGDDWLFGDEGDDLISGGTGRDRFILFSG 650
Query: 313 SYLYKIYRFE 322
I F+
Sbjct: 651 GGTDTIQDFQ 660
>gi|17544965|ref|NP_518367.1| calcium binding hemolysin protein [Ralstonia solanacearum GMI1000]
gi|17427255|emb|CAD13774.1| putative calcium binding hemolysin protein [Ralstonia solanacearum
GMI1000]
Length = 1156
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 61/426 (14%), Positives = 112/426 (26%), Gaps = 48/426 (11%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ + +D + + G G +N G + + + D
Sbjct: 19 GGAGNDYLSGENGSDTYVFNSGWGQDTIYNYDTTAGRSDVIEFGTGIAASDILATRSGDD 78
Query: 154 E-----NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
N S +V SYF + + V + +N+Y
Sbjct: 79 LILSLRNSSDKVTVQSYFNSDATGAYRVDLIRFADGTTWDVKTVSTKTIGATNAADNLYG 138
Query: 209 I--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + TI GG+D L G + SI G N +
Sbjct: 139 YATDDEINGLDGNDTIRGYGGNDTL----RGDAGADTVYGGDGNDSIDGGADNDYLYGEA 194
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ ++G SGND + G + N+ +GND G+ G DT+ + + IY ++
Sbjct: 195 GDDRLLGGSGNDTLYGGNGNDTLEGGAGNDYLVGNEGSDTYVFNSGWGQDTIYNYDTTAG 254
Query: 327 VYDANEHKQDFLS-------------------------------------DVERLRFADQ 349
D + ++++RFAD
Sbjct: 255 RSDVITFGTGIAATDVIATRSGDDLILSLRNGSDKVTVQSYFNSDATGPYRIDQVRFADG 314
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
V + + T+ ++L D + G D +
Sbjct: 315 TSWDVAAVKALVQAPTSGADNLYGYASDDTLNGLDGNDTLRGYGGNDTLRWDAGADNLFG 374
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
N Y G + L A ++ L + + G D
Sbjct: 375 GDGNDVLDGGADNDYLYGEAGDDSLQGGAGNDNLYGGAGNDTLEGGAGNDYLVSNEGSDT 434
Query: 470 FSNFGC 475
+
Sbjct: 435 YVFNSG 440
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 67/467 (14%), Positives = 114/467 (24%), Gaps = 66/467 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + + + D G G ++S+
Sbjct: 378 NDVLDGGADNDYLYGEAGDDSLQGGAGNDNLYGGAGNDTLEGGAGNDYLVSNEGSDTYVF 437
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYEND-----------SFLTSVMSYFMPQDSMMDASFGY 179
G YN D D S ++S D + S+ Y
Sbjct: 438 NSGWGQDTIYNYDTTAGRSDVIAFGDGIAASDIIATRSGDDLILSLRNSSDKITVQSYFY 497
Query: 180 CATPMVSDIVAVQKIYGAP------------KGSLGNNIYKI--EVQQKDSPFIQTIYDS 225
I V G S +N+Y + T+
Sbjct: 498 SDATGPYRIDQVHFADGTSWDVAAVKALVQVPTSGTDNLYGYASDDVLNGLDGNDTLRGY 557
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG+D L G + SI G N + +++ GSSGND + G +
Sbjct: 558 GGNDTL----RGDAGADTVYGGDGNDSIDGGADNDYLYGEAGDDALQGSSGNDTLYGGNG 613
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS------ 339
N+ +GND G+ G DT+ + IY ++ D E +
Sbjct: 614 NDTLEGGAGNDYLVGNEGSDTYVFNTGWGQDTIYNYDATSERSDVIEFGSGIAATDVIAT 673
Query: 340 -------------------------------DVERLRFADQCIDSVNVKQRSILEYTASY 368
++++RFAD V + + T+
Sbjct: 674 RSGDDLILSLRNGSDKVTVQSYFYSDASGPYRIDQVRFADGTSWDVAAVKALVQVPTSGA 733
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
++L DV + G D + N Y
Sbjct: 734 DNLYGYASDDVLNGLDGNDTIRGYGGNDTLRGEAGADNLFGGDGNDVLDGGADNDYLYGE 793
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
G L ++ L + + G D +
Sbjct: 794 SGDDSLLGGSGNDNLYGGTGNDTLEGGAGNDYLVSNEGSDTYVFNSG 840
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 64/508 (12%), Positives = 124/508 (24%), Gaps = 49/508 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ S + D G G ++ + G
Sbjct: 582 DGGADNDYLYGEAGDDALQGSSGNDTLYGGNGNDTLEGGAGNDYLVGNEGSDTYVFNTGW 641
Query: 135 MHPGSYNGGYPVYGVDNDYEND-----------SFLTSVMSYFMPQDSMMDASFGYCATP 183
YN D S ++S D + S+ Y
Sbjct: 642 GQDTIYNYDATSERSDVIEFGSGIAATDVIATRSGDDLILSLRNGSDKVTVQSYFYSDAS 701
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
I V+ + + + + D+ D L G N
Sbjct: 702 GPYRIDQVRF--------ADGTSWDVAAVKALVQVPTSGADNLYGYASDDVLNGLDGNDT 753
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ G + + + G + ND + G S ++ SGND G +G
Sbjct: 754 IRGYGGNDTLRGEAGADNLFGGDGNDVLDGGADNDYLYGESGDDSLLGGSGNDNLYGGTG 813
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT + + E + + QD + + + I + S +
Sbjct: 814 NDTL--EGGAGNDYLVSNEGSDTYVFNSGWGQDTIYNYDTTAGRSDVIAFGDGIAASDII 871
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
T S +DLI + + Y + + G G+ D+ V A
Sbjct: 872 ATRSGDDLILSLRNSSDKITVQSYFYSDATGPYRIDQVRFADGTSWDVAAV------KAL 925
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
T G + L + ++ + + + G D+ +
Sbjct: 926 VQVPTSGADNLYGYASDDVLNGLDGNDTIRGYGGNDTLRGEAGADNLFGGDGNDVLDGGA 985
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
D+ Y G L ++ L +
Sbjct: 986 DNDYL---------------------YGEAGDDSLLGGSGNDNLYGGNGNDTLEGGAGND 1024
Query: 544 PDLVQAGKDHFS-NFGYEEGRSITFNPD 570
+ G D + N G+ + ++
Sbjct: 1025 YLVGNEGSDTYVFNSGWGQDSIYNYDTS 1052
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 83/272 (30%), Gaps = 11/272 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
T + ++ + +D + + G G +N G + +
Sbjct: 801 GGSGNDNLYGGTGNDTLEGGAGNDYLVSNEGSDTYVFNSGWGQDTIYNYDTTAGRSDVIA 860
Query: 136 HPGSYNGGYPVYGVDNDYE-----NDSFLTSVMSYFMPQDSMMDASFGYCATPMV-SDIV 189
+ D N S +V SYF + D+
Sbjct: 861 FGDGIAASDIIATRSGDDLILSLRNSSDKITVQSYFYSDATGPYRIDQVRFADGTSWDVA 920
Query: 190 AVQKIYGAPKGSLGNNI-YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
AV+ + P N Y + TI GG+D L G +
Sbjct: 921 AVKALVQVPTSGADNLYGYASDDVLNGLDGNDTIRGYGGNDTL----RGEAGADNLFGGD 976
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G N + +S++G SGND + G + N+ +GND G+ G DT+
Sbjct: 977 GNDVLDGGADNDYLYGEAGDDSLLGGSGNDNLYGGNGNDTLEGGAGNDYLVGNEGSDTYV 1036
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + IY ++ + D +D
Sbjct: 1037 FNSGWGQDSIYNYDTSTGRSDVIAFGDGIATD 1068
>gi|119385192|ref|YP_916248.1| hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
gi|119374959|gb|ABL70552.1| Hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
Length = 561
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 88/299 (29%), Gaps = 28/299 (9%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE--SWSSIGGYE 257
G+ GN++ + T+Y GG D + ++ G + D + +
Sbjct: 33 GNDGNDLMNGSDVDMGA---DTLYGGGGSDTITGSIGGDSIDGGDGDDYLYGARIDSTPD 89
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG------NDVFDGSSGLDTF---- 307
N TI + + G G+D++ G + N+ G D G G D
Sbjct: 90 GNDTIFGGAGDDYIQGMMGSDLLYGGTGNDRIVGDGGGATAGHADTIYGDEGNDRIWAGG 149
Query: 308 ---FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSI 361
Y +Y + + D L+ + + + +
Sbjct: 150 GGDLVYGGDDNDLVYGDAGNDTL--HGDAGNDTLAGGADHDLIYGGTGDDLLLGEAGNDL 207
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFG 416
++ A ++ L+ G D G D D ++ G+ D + +
Sbjct: 208 VDGGAGHDSLLGGAGSDTLLGGAGRDTLDGGAGADTLTGGLDADVFIADGTADTITDFNA 267
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
++ A V + + + A++ L + + ++ G
Sbjct: 268 TEGIGDADSSNNDLVDLSAFYNQTRLAAWNAANPGLQFNTPLDWLRYEQSQGALASAGG 326
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/256 (12%), Positives = 69/256 (26%), Gaps = 31/256 (12%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS---GLDTFFYYAPSYLYKI 318
I + + G+ +D + ++ + + GND+ +GS G DT + I
Sbjct: 4 IPGTNGNDILNGTPQDDEFHRGNGFDLVYGNDGNDLMNGSDVDMGADTLY--GGGGSDTI 61
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + + ++ D ++ + L G D
Sbjct: 62 TGSIGGDSIDGGDGDDYLYGARIDST--PDGNDTIFGGAGDDYIQGMMGSDLLYGGTGND 119
Query: 379 VFESM------KHFYEFGLSEGRD-------------ITFDSYLYLGSYDDLRNVFGSDR 419
H EG D + +Y + +D + +
Sbjct: 120 RIVGDGGGATAGHADTIYGDEGNDRIWAGGGGDLVYGGDDNDLVYGDAGNDTLHGDAGND 179
Query: 420 GAAARH-----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
A Y G ++ A H+ L+ L G+D
Sbjct: 180 TLAGGADHDLIYGGTGDDLLLGEAGNDLVDGGAGHDSLLGGAGSDTLLGGAGRDTLDGGA 239
Query: 475 CEEGRFVTFDSYLYLG 490
+ D+ +++
Sbjct: 240 GADTLTGGLDADVFIA 255
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 70/257 (27%), Gaps = 5/257 (1%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D+ + + N + D +D IG +I + + A P
Sbjct: 29 DLVYGNDGNDLMNGSDVDMGADTLYGGGGSDTITGSIGGDSIDGGDGDDYLYGARIDSTP 88
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+ + G D + + +I+ A
Sbjct: 89 DGNDTIFGGAGDDYIQGMMGSDLLYGGTGNDRIVGDGGGATAGHADTIYGDEGNDRIW-A 147
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G T++ G+D L GG + + + G
Sbjct: 148 GGGGDLVYGGDDNDLVYGDAGNDTLHGDAGNDTL----AGGADHDLIYGGTGDDLLLGEA 203
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + +S++G +G+D ++G + + +G D G D F +
Sbjct: 204 GNDLVDGGAGHDSLLGGAGSDTLLGGAGRDTLDGGAGADTLTGGLDADVFIADGTADTIT 263
Query: 318 IYRFENAIIVYDANEHK 334
+ I D++ +
Sbjct: 264 DFNATEGIGDADSSNND 280
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 82/268 (30%), Gaps = 34/268 (12%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALG--LMHPGSYNGGYPVYGVDNDYENDSFLT 160
+ D+ N + G LM+ + G + +
Sbjct: 6 GTNGNDILNGTPQDDEFHRGNGFDLVYGNDGNDLMNGSDVDMGADTLYGGGGSDTITGSI 65
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIV-------AVQKIYGAP--KGSLGNNIYKIEV 211
S +TP +D + +Q + G+ G GN+ +
Sbjct: 66 GGDSIDGGDGDDYLYGARIDSTPDGNDTIFGGAGDDYIQGMMGSDLLYGGTGNDRIVGDG 125
Query: 212 QQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ TIY G+D + + GG N + ++ G N T+A
Sbjct: 126 GGATAGHADTIYGDEGNDRIWAGGGGDLVYGGDDNDLVYGDAGNDTLHGDAGNDTLAGGA 185
Query: 267 ------------------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ V G +G+D ++G + ++ +G D DG +G DT
Sbjct: 186 DHDLIYGGTGDDLLLGEAGNDLVDGGAGHDSLLGGAGSDTLLGGAGRDTLDGGAGADTLT 245
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQD 336
+ ++ + I ++A E D
Sbjct: 246 GGLDADVFIADGTADTITDFNATEGIGD 273
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 69/281 (24%), Gaps = 54/281 (19%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-YYAPSYLYKIYRFENAIIVYDAN 331
G++GND++ G ++ F +G D+ G+ G D +Y + + +
Sbjct: 6 GTNGNDILNGTPQDDEFHRGNGFDLVYGNDGNDLMNGSDVDMGADTLYGGGGSDTITGSI 65
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D + + + A + + ++G D+
Sbjct: 66 GGDSIDGGDGDDYLY--GARIDSTPDGNDTIFGGAGDDYIQGMMGSDLLYGGTGNDRIVG 123
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
G G D + G+DR A + L Y + D
Sbjct: 124 DGGGAT-------AGHADTIYGDEGNDRIWAGGG------GDLVYGGDDNDLVYGDAGND 170
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
++ A L Y
Sbjct: 171 TLHGDAGNDTLAGGADHDLI--------------------------------------YG 192
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G ++ A H+ L+ L AG+D
Sbjct: 193 GTGDDLLLGEAGNDLVDGGAGHDSLLGGAGSDTLLGGAGRD 233
>gi|325982883|ref|YP_004295285.1| peroxidase/Serralysin [Nitrosomonas sp. AL212]
gi|325532402|gb|ADZ27123.1| Peroxidase/Serralysin [Nitrosomonas sp. AL212]
Length = 1639
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 68/510 (13%), Positives = 122/510 (23%), Gaps = 109/510 (21%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+G ++ LD + + S + N T Q+ S ++++G
Sbjct: 1113 TGQNNALDNVNQLNGTHTVAERIGMISGLSALLDNPTTPQNEG----TSFSAGNILLGGG 1168
Query: 285 ANNVFFESSGNDVFDGSS------------------------------------------ 302
+++ G+D+ DG +
Sbjct: 1169 GSDLIEGRGGDDIIDGDAWLNVRILAGTQSFPNMTPALRTAMQNGTYSPDQLVIVREILS 1228
Query: 303 ---GLDTFFYYAPSYLYKIYRFENAIIVYDA-----NEHKQDFLSDVERLRFADQCIDSV 354
G+DT Y Y + I D + D + +VERL+FAD+ I +V
Sbjct: 1229 NSTGVDTALYGDVFANYVVNVDSTGTIFVDHANPVVGDDGSDRIRNVERLQFADR-IVTV 1287
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ TA + L+ + G D + + G D + +
Sbjct: 1288 GTNGDDNMVGTAGNDVLLALGGNDTLDGLDGVDILNGGPGDDTYTVNTTTDTIIELAGVG 1347
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKA-LEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
G D A++ Y E + ++ G D
Sbjct: 1348 SGIDTVASSVTYTLGLNLENLTLTGTAPNGTGNNVGNVITGNASNNILTGLGGDDTLIAG 1407
Query: 474 GCEEGRFVTFDSYLYLGSYDDL----RNVFGSDRGAAARHYITHGVKEGRNPDA------ 523
G + ++ Y+ S + G+D + Y E
Sbjct: 1408 GGTDTLRGGLNNDTYVISNLPVTITELLNQGTDTVESPVTYTLLANVENLTLTGGDAING 1467
Query: 524 --------------FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
L A + L + AG D G ++ P
Sbjct: 1468 TGNGLANILTGNSNNNTLNGGAGLDTLNGGDGNDTLNGAAGID--ILNGDNGADTLIGGP 1525
Query: 570 DL-------------YLTS-------YDDLWNVFGSDRSAAAQHYITHGMKEGRALGISG 609
YL + D F + I A ++
Sbjct: 1526 SADTLIGGAGADIFDYLAAVGHSNPANRDTIMDFETGIDTIDLSAID-------ANVLAA 1578
Query: 610 MQFKSVMNLSEKSRDKADLSLSFDHKKVDL 639
L +D L
Sbjct: 1579 FPGNQAFIFIGSDAFSGGGQLRYDSATGLL 1608
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/317 (13%), Positives = 73/317 (23%), Gaps = 18/317 (5%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
TI D D D + + E ++ + + +
Sbjct: 828 SAQTVSGTIIDDPDTTTYD----ERDLLIRDTSLGPDTIRYTGEDHVVMGGTESNDRLRA 883
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+G+D + G+ N+ +GND +G G D S I + +
Sbjct: 884 GAGDDTLWGDGGNDRLEGGAGNDSINGGDGNDRI--TDASGDDNIKGGDGHDFINGGAGI 941
Query: 334 KQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
I V + A E + G D + +
Sbjct: 942 NLILAGSGHDFVVTGNDISEVFAGPGNDFIFGNAPNEVMQGNEGDDWIQ--TGTADGSTG 999
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
+ D + +D+ G +I G E A S D
Sbjct: 1000 DNFDPFNRDPI---RGNDVFVGSGG-----LDEFIGEGGDEVMMGLAGADRNDGGSGFDW 1051
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
V G FD ++ + G DR + I
Sbjct: 1052 TANVGS-TVAANVDLARLLVPGPFVDTADRFDLVEAASGWNQNDTIRGDDRTSTELELID 1110
Query: 513 HGVKEGRNPDAFKALEY 529
+ D L
Sbjct: 1111 PNTGQNNALDNVNQLNG 1127
Score = 42.1 bits (97), Expect = 0.34, Method: Composition-based stats.
Identities = 37/239 (15%), Positives = 70/239 (29%), Gaps = 11/239 (4%)
Query: 67 DLTFEETSIHSDIKFISS---NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
+LT T+ + + + N I D R G+ T + N
Sbjct: 1367 NLTLTGTAPNGTGNNVGNVITGNASNNILTGLGGDDTLIAGGGTDTLRGGLNNDTYVISN 1426
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
I L++ G+ PV + LT + + + + G
Sbjct: 1427 LPVTITE---LLNQGTDTVESPVTYTLLANVENLTLTGGDAINGTGNGLANILTGNSNNN 1483
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
++ + + G N I++ T+ D L G +
Sbjct: 1484 TLNGGAGLDTLNGGDGNDTLNGAAGIDI-LNGDNGADTLIGGPSADTL--IGGAGADIFD 1540
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
L S ++ + T I+++ S+ + V+ N F G+D F G
Sbjct: 1541 YLAAVGHS--NPANRDTIMDFETGIDTIDLSAIDANVLAAFPGNQAFIFIGSDAFSGGG 1597
>gi|32766501|gb|AAH54949.1| MGC64247 protein [Xenopus laevis]
Length = 477
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 60/196 (30%), Gaps = 52/196 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + YK + + AL WS+V LTF E
Sbjct: 88 LSGGRWDKTNLTYKIIRFPWQLSKVKV-------RRTIAEALKVWSEVTPLTFTEVHEGR 140
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
SDI + + P+ +++FD + W G GT L
Sbjct: 141 SDIIIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDEAWTIGNNIGTDLL 198
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H S S+MS +F Y
Sbjct: 199 QVAAHEFGHMLGLQHS-------------------SISKSLMS--------PFYTFRYPL 231
Query: 182 TPMVSDIVAVQKIYGA 197
+ D +Q +YGA
Sbjct: 232 SLSADDKHGIQFLYGA 247
>gi|242280843|ref|YP_002992972.1| hemolysin-type calcium-binding region [Desulfovibrio salexigens DSM
2638]
gi|242123737|gb|ACS81433.1| Hemolysin-type calcium-binding region [Desulfovibrio salexigens DSM
2638]
Length = 1187
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 50/354 (14%), Positives = 105/354 (29%), Gaps = 21/354 (5%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG------KGTILSHNALHE 127
+ + ++ +G + S +E + + G + + L
Sbjct: 429 NGGAGNNYLDGGSGEAHETDFASFDGLEHGVNVDLSNKNDAGEVIVITDDDDNTQDVLVN 488
Query: 128 IGHALGLMH----PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
I +G H G G++ +YE+ + +
Sbjct: 489 IEGVIGTAHKDTLTGDDGVNRFAPGLNEEYESSGAESVEGGDGKDWIQFETLDSKFYVNM 548
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+SD +A ++ + + + I +I + G D N
Sbjct: 549 DLSDGLAEIH----------DSTKSSDSSRVNEINISSIENIIGSSGNDKLRGDESVNNT 598
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
L + I G + + +S++G SG+D + G S ++ G +V +G SG
Sbjct: 599 ILGGKGNDLIDGKGASNILKGEDGNDSIIGGSGDDNIDGGSGDDSIKAGKGTNVINGGSG 658
Query: 304 LDTFFYYAPSYLYKIY-RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+D+ Y I + + A+ + D S+VE+++ +
Sbjct: 659 IDSLTYSNSDTSVTIDMNGNGSGVANSADTYISDTFSEVEKIKGSTHDDTFNGSAYADTF 718
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ + + + G DV + G DI Y
Sbjct: 719 DGNDGADVIKGLDGADVLSGGEGNDTIYGGAGNDIINGGLGQNNLYGGTAAGTD 772
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 81/472 (17%), Positives = 123/472 (26%), Gaps = 26/472 (5%)
Query: 69 TFEETSI--HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
TF E S + + Y T + + D ADV G G TI
Sbjct: 693 TFSEVEKIKGSTHDDTFNGSAYADTFDGNDGADVIKGLDGADVLSGGEGNDTIYGGAGND 752
Query: 127 EIGHALGLMHPGSYNGGYPVYGVD-NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
I LG + G+D Y S +T M F T +
Sbjct: 753 IINGGLGQNNLYGGTAAGTDMGLDTLSYAGASQVTIDMQLGKAFHDSTYDHFYDFDTFIG 812
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-- 243
SD + +G K T G D + + G +
Sbjct: 813 SDGEDIFTGHGTAVDIFFGG--KGNDTFTGKDGNDTFDGGTGTDTISFIGLTGATGVVVN 870
Query: 244 --DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ + + + T +ES VG+ D G S N F G DVFDG
Sbjct: 871 ACSTGYGTATHLNSSNATTETDKFTNVESFVGTDYVDTFNGCSNNETFLGGKGADVFDGG 930
Query: 302 SGLDTFFYYAPSYLYKIYRFENAI---IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G DT Y I + ++D +D++ + +
Sbjct: 931 GGHDTLDYSDFEAGVTITVNADGDGQAERTVETVFERDTFTDIDEFFGSMAGDTFIGGTG 990
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ G D + F E I+ + L D S
Sbjct: 991 DI-------DQTFCGNSGTDSMDGGGGTD-FISFESPSISTGVTIDLADNADGITCTASG 1042
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ G + + + AD +LV + EG
Sbjct: 1043 GSD--DSFTNIEGVIGSSYSDTITASSVGASTIQGGGGADTINLVNGKATELAYTSLSEG 1100
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
D S +D SD ++A Y G +G +I
Sbjct: 1101 GDTIND----FKSGEDYFYFGDSDLDSSAEFYTFSGSYDGEADKGTDDAYFI 1148
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 79/257 (30%), Gaps = 16/257 (6%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N + S +I G N T+ + + G +GND + G + ++ +GN+
Sbjct: 376 GTAANETITGSSSQDTIYGEGGNDTLYGEAGDDELFGGTGNDSMFGGAGEDMLNGGAGNN 435
Query: 297 VFDGSSG----LDTFFYYAPSYLYKIYRFENAI-----IVYDANEHKQDFLSDVERLRFA 347
DG SG D + + + ++ D +++ QD L ++E +
Sbjct: 436 YLDGGSGEAHETDFASFDGLEHGVNVDLSNKNDAGEVIVITDDDDNTQDVLVNIEGVIGT 495
Query: 348 DQCIDSVNVKQRSIL-------EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ ++ E + G+D + +F ++
Sbjct: 496 AHKDTLTGDDGVNRFAPGLNEEYESSGAESVEGGDGKDWIQFETLDSKFYVNMDLSDGLA 555
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
D V + + + G + R ++ DLI+ +
Sbjct: 556 EIHDSTKSSDSSRVNEINISSIENIIGSSGNDKLRGDESVNNTILGGKGNDLIDGKGASN 615
Query: 461 DLVQVGKDHFSNFGCEE 477
L + G +
Sbjct: 616 ILKGEDGNDSIIGGSGD 632
>gi|225377885|ref|ZP_03755106.1| hypothetical protein ROSEINA2194_03545 [Roseburia inulinivorans DSM
16841]
gi|225210323|gb|EEG92677.1| hypothetical protein ROSEINA2194_03545 [Roseburia inulinivorans DSM
16841]
Length = 282
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS--ITFNPDLYLTSYDDLWN 581
F A Y S+ DL AF Q +HF + G EGRS FN +Y +Y DL
Sbjct: 41 FDAEYYYNSNPDLQAAFGYD---AQKLFNHFVSSGIYEGRSGCANFNVAIYRANYPDLQA 97
Query: 582 VFGSDRSAAAQHYITHGMKEGRALG 606
FG+D ++ HY +G EGR
Sbjct: 98 AFGNDLASYCAHYAANGAAEGRNAT 122
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFA 541
FD+ Y S DL+ FG D H+++ G+ EGR+ F Y A++ DL AF
Sbjct: 41 FDAEYYYNSNPDLQAAFGYDAQKLFNHFVSSGIYEGRSGCANFNVAIYRANYPDLQAAFG 100
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT 566
+ A H++ G EGR+ T
Sbjct: 101 NDLASYCA---HYAANGAAEGRNAT 122
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDL 495
F A Y S+ DL AF + +HF + G EGR F+ +Y +Y DL
Sbjct: 39 AVFDAEYYYNSNPDLQAAFGYDAQKL---FNHFVSSGIYEGRSGCANFNVAIYRANYPDL 95
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPD 522
+ FG+D + HY +G EGRN
Sbjct: 96 QAAFGNDLASYCAHYAANGAAEGRNAT 122
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 2/105 (1%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGS 407
Y S DL G D + HF G+ EGR F+ +Y +
Sbjct: 32 SNTGAYQAVFDAEYYYNSNPDLQAAFGYDAQKLFNHFVSSGIYEGRSGCANFNVAIYRAN 91
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
Y DL+ FG+D + HY +G EGRN + A +
Sbjct: 92 YPDLQAAFGNDLASYCAHYAANGAAEGRNATTLISAGEGAQASIV 136
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 457
FD+ Y S DL+ FG D H+++ G+ EGR+ F Y A++ DL AF
Sbjct: 41 FDAEYYYNSNPDLQAAFGYDAQKLFNHFVSSGIYEGRSGCANFNVAIYRANYPDLQAAFG 100
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ H++ G EGR T
Sbjct: 101 NDLASYCA---HYAANGAAEGRNATT 123
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 26/67 (38%)
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDK 625
F+ + Y S DL FG D H+++ G+ EGR+ + N +
Sbjct: 40 VFDAEYYYNSNPDLQAAFGYDAQKLFNHFVSSGIYEGRSGCANFNVAIYRANYPDLQAAF 99
Query: 626 ADLSLSF 632
+ S+
Sbjct: 100 GNDLASY 106
>gi|326670156|ref|XP_692205.5| PREDICTED: stromelysin-3 [Danio rerio]
Length = 501
Score = 74.1 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 59/199 (29%), Gaps = 52/199 (26%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-S 74
++L W + YK + + + + AL WS V LTF E +
Sbjct: 107 YVLFGGRWPKTDLTYKIQRFPWQMREDKV-------RRIFQEALKVWSDVTPLTFTEVVN 159
Query: 75 IHSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
+DI + + PR +I+FD + W G GT
Sbjct: 160 QEADIVIDFTRYWHGDNLPFDGPGGILAHAFFPRTHRE--GDIHFDYDESWTVGNELGTD 217
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
L A HE GH LGL H + SF Y
Sbjct: 218 LLQVAAHEFGHVLGLQHSLVPGAIMSPF---------------------------YSFSY 250
Query: 180 CATPMVSDIVAVQKIYGAP 198
D +Q +YG P
Sbjct: 251 PLKLSEDDKKGIQYLYGPP 269
>gi|209525372|ref|ZP_03273913.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Arthrospira
maxima CS-328]
gi|209494223|gb|EDZ94537.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Arthrospira
maxima CS-328]
Length = 443
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 56/147 (38%), Gaps = 13/147 (8%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G N + + +E I G + N TI + + G G+D++ GN N++ + GN
Sbjct: 252 FAGGGNDLVIGSEIDDVINGNQGNDTIYGGAGNDLIWGGQGDDLLFGNDGNDIINGNRGN 311
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE-----RLRFADQC 350
D G +G D F + I+ + D L E L AD
Sbjct: 312 DTIYGGAGDD--FIRGGQGDDYLSGDAGNDILI--GDLGADTLVGGEGADTFVLTHADAT 367
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQ 377
ID IL++ + D I V+G
Sbjct: 368 IDQA----DLILDFNLAEGDRIAVVGD 390
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 4/115 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
S I + G+D + GG N + + + G + N I +
Sbjct: 255 GGNDLVIGSEIDDVINGNQGNDTI----YGGAGNDLIWGGQGDDLLFGNDGNDIINGNRG 310
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++ G +G+D + G ++ +GND+ G G DT + + + +
Sbjct: 311 NDTIYGGAGDDFIRGGQGDDYLSGDAGNDILIGDLGADTLVGGEGADTFVLTHAD 365
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 59/201 (29%), Gaps = 12/201 (5%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N + + + + G+ GND + G + N++ + G+D+ G+ G D
Sbjct: 251 VFAGGGNDLVIGSEIDDVINGNQGNDTIYGGAGNDLIWGGQGDDLLFGNDGNDII--NGN 308
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
IY + L + L + +
Sbjct: 309 RGNDTIYGGAGDDFIRGGQGDDY--------LSGDAGNDILIGDLGADTLVGGEGADTFV 360
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+ +F L+EG I + + N G+D GV
Sbjct: 361 LTHADATIDQADLILDFNLAEGDRIA--VVGDIDPSVLILNSVGNDTHILLPEGGIFGVV 418
Query: 433 EGRNPDAFKALEYIASHEDLI 453
+ PD + + S +DL
Sbjct: 419 QNAQPDLVRQGLFTLSPQDLA 439
Score = 42.1 bits (97), Expect = 0.33, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 43/180 (23%), Gaps = 13/180 (7%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSY 402
+ + ++ + + G D+ + ++G DI +
Sbjct: 254 GGGNDLVIGSEIDDVINGNQGNDTIYGGAGNDLIWGGQGDDLLFGNDGNDIINGNRGNDT 313
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
+Y G+ DD D G L + + ADA
Sbjct: 314 IYGGAGDDFIRGGQGDDYL----SGDAGNDILIGDLGADTLVGGEGADTFVLTHADATID 369
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
F+ + V L G+D GV + PD
Sbjct: 370 QADLILDFNLAEGDRIAVVGDIDPSVLILNS-----VGNDTHILLPEGGIFGVVQNAQPD 424
>gi|170061521|ref|XP_001866269.1| interstitial collagenase [Culex quinquefasciatus]
gi|167879733|gb|EDS43116.1| interstitial collagenase [Culex quinquefasciatus]
Length = 485
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 67/222 (30%), Gaps = 63/222 (28%)
Query: 2 HNIKPVYTTE----RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW 57
++ +P +T + L WS I Y+ L +I + R
Sbjct: 89 YHDEPYHTVDLDGVNSTAELTSQFKWSKSVISYRIMNYPVRVLQSEI-------RAAVRH 141
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFI-------------------SSNNGYVCTPRYDSRY 98
A WS+V +L F E + D+ S + P + +
Sbjct: 142 AFDAWSRVTNLDFVEDTRTIDVDIQLAFEGSNHQRRGQPCRYSYDSTLAHAFFPEHGDVH 201
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
F F D + A HEIGH+LGL+H +
Sbjct: 202 FNTKYFFTEDTSIEQ------FINTATHEIGHSLGLLHS-------------------TS 236
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
S+M + + A P DI A+Q +YG
Sbjct: 237 RDSIMYFSQTSNLF--------AEPQPEDINAIQSLYGVRSS 270
>gi|159046410|ref|YP_001542081.1| hemolysin-type calcium-binding region [Dinoroseobacter shibae DFL 12]
gi|157914169|gb|ABV95600.1| hemolysin-type calcium-binding repeat protein [Dinoroseobacter shibae
DFL 12]
Length = 1895
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 53/363 (14%), Positives = 94/363 (25%), Gaps = 65/363 (17%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTES 249
GA + +L N I++I+ S DD + D G + I+
Sbjct: 1523 GAVQINLQNGSVTGADGTDTLLNIESIFASHHDDTIQGSTARDQVNGGDGDDDINAR-GG 1581
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ I G N TI + + G GND +I + +G+D+ G++G D F
Sbjct: 1582 FDLIDGGAGNDTINGGVGSDVLNGDGGNDTIIAGDGFDEVDGGAGDDLLKGNAGND--FI 1639
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ +I +++ ++ + A+ + +L A +
Sbjct: 1640 AGGAGADRIEGGIGRDMLHGGDDDDD--------ISGAEGFDEIFGDAGDDLLRGNAGND 1691
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D E G D
Sbjct: 1692 TIEGGAGDDRIEGGIGADTLRGGVGND--------------------------------- 1718
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
E + F AL + L+ + G D +
Sbjct: 1719 ---EIVASEGFDALFGEDGDDTLLGNAGNDLLEGGAGMDALFGGQGADTLRGGDGDD--- 1772
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
A G E R L A ++ L+ + +
Sbjct: 1773 ---------ILRGETGADTLIGGVGDDELRGGQGGDRLSGGAGNDILVGGSGADVFVFEG 1823
Query: 550 GKD 552
G D
Sbjct: 1824 GVD 1826
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 58/393 (14%), Positives = 101/393 (25%), Gaps = 35/393 (8%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
F S + V T + Y + DV G + NA + L
Sbjct: 1478 FGGSQDDDVITGTDRAEYEGFQGYGGNDVIDGRGGFDEVYYLNASGAVQINLQNGSVTGA 1537
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+G + +++ + + T S Q + D A D++ G
Sbjct: 1538 DGTDTLLNIESIFASHHDDTIQGSTARDQVNGGDGDDDINAR-GGFDLIDGGAGNDTING 1596
Query: 201 SLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESW- 250
+G+++ + GDDLL D G + I+
Sbjct: 1597 GVGSDVLNGDGGNDTIIAGDGFDEVDGGAGDDLLKGNAGNDFIAGGAGADRIEGGIGRDM 1656
Query: 251 -------SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
I G E I + + G++GND + G + ++ G D G G
Sbjct: 1657 LHGGDDDDDISGAEGFDEIFGDAGDDLLRGNAGNDTIEGGAGDDRIEGGIGADTLRGGVG 1716
Query: 304 LDTFF-------YYAPSYLYKIYRFENAIIVYDA-------NEHKQDFLSD---VERLRF 346
D + + ++ D L + LR
Sbjct: 1717 NDEIVASEGFDALFGEDGDDTLLGNAGNDLLEGGAGMDALFGGQGADTLRGGDGDDILRG 1776
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L + L G D+ F G D D L +
Sbjct: 1777 ETGADTLIGGVGDDELRGGQGGDRLSGGAGNDILVGGSGADVFVFEGGVDTITDMSLIVD 1836
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ + G A+ G +
Sbjct: 1837 RIEIDGDALGIAGLTGAQVLDQFAEAIGPSTQI 1869
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 68/461 (14%), Positives = 117/461 (25%), Gaps = 40/461 (8%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
SD + + + + D G TIL+ ++ G
Sbjct: 739 GSDFNDVLATSNVGARLEGEDGDDFLKGRLGEDRLEGDAGNDTILAGAGDDQLSDGRGFD 798
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G + D T V + + D S ++ +I AV
Sbjct: 799 YLNGGAGWDLFFRDIGQDFEDFSWTPV--VDLTEGKFFDPSEDPALFDILENIEAVSLEG 856
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+G++ + ++ D D + DL + G
Sbjct: 857 NFNMTLIGDDGDNFLESDAGNDLLEGNGGDDELDGGDGDDTLNGGDGNDL-------LFG 909
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N + + + G +G+D + G ++ GNDV +G G D F S +
Sbjct: 910 GEGNDGLYGDAGDDELYGEAGDDTLEGGDGDDYLNGGGGNDVINGGDGDD-FIDIGGSGV 968
Query: 316 YKIYRFENAIIV------------------------YDANEHKQDFLSDVERLRF-ADQC 350
+ E N DF++DVE + D
Sbjct: 969 ATVDGGEGWDTYFVDLTGFNPGDFIYELNLITGYAGVFGNPFNSDFVADVEEILVEGDLE 1028
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+R I +++ G D +GRD D
Sbjct: 1029 TRLTGTNEREIFNGGDGNDEITGNGGDDELIGNDGNDTLIGGDGRDFL----AGGDGDDT 1084
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L G+ YI G+ AL D+ A V +
Sbjct: 1085 LDASTGAASTQGFGDYIRAGLGSNTIIGH-AALFAAGEGIDISYADLAGIGGVTITVGAN 1143
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
G D Y + + G+ +
Sbjct: 1144 GTGTTVSGTPGQVDDTFTFAHYFEGSRDGDTFTGSNNADFE 1184
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 79/533 (14%), Positives = 134/533 (25%), Gaps = 74/533 (13%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG-- 129
E + + + + I D DV R G G I + EI
Sbjct: 1244 EIVGSQSDDVMEATGSTGVRFDGEDGDDLLIGTDADDVLRGGDGDDEIHAGLGTDEIDGG 1303
Query: 130 -----------------HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
+ L D + ++ +
Sbjct: 1304 EGSDTLVTDVTGLGPDQITVDLDPLAGSQTIAGEGPGAADTLVGTENFTLTGDWDATVIG 1363
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI---------YKIEVQQKDSPFIQTIY 223
DA+ DI G+ + I + + T+
Sbjct: 1364 SDAANIITTGGGADDITTGLGRDTVNAGAGDDVIDASAGDLASEGFGDRIRPGLGSDTVL 1423
Query: 224 D-------SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
GG +L + G I + ++ + T + GS
Sbjct: 1424 GSATLYAQGGGINLAYFDVSGVSGLTITVGVNGSGTVVSGTAGLVNDSFTFADVFGGSQD 1483
Query: 277 NDVVIGNSANNV--FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+DV+ G F GNDV DG G D +Y S +I ++
Sbjct: 1484 DDVITGTDRAEYEGFQGYGGNDVIDGRGGFDEVYYLNASGAVQINLQNGSVT----GADG 1539
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D L ++E + + ++ + + + + G D + F G
Sbjct: 1540 TDTLLNIESIFAS---------HHDDTIQGSTARDQVNGGDGDDDINARGGFDLIDGGAG 1590
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
D G D+ N G + G E L+ A ++ +
Sbjct: 1591 NDTING-----GVGSDVLNGDGGNDTI----IAGDGFDEVDGGAGDDLLKGNAGNDFIAG 1641
Query: 455 AFADAPDLVQVGKD--HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR--------- 503
+G+D H + + FD D LR G+D
Sbjct: 1642 GAGADRIEGGIGRDMLHGGDDDDDISGAEGFDEIFGDAGDDLLRGNAGNDTIEGGAGDDR 1701
Query: 504 ----GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
A G E + F AL + L+ + AG D
Sbjct: 1702 IEGGIGADTLRGGVGNDEIVASEGFDALFGEDGDDTLLGNAGNDLLEGGAGMD 1754
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 88/307 (28%), Gaps = 19/307 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + G + +DV G TI++ + E+ G
Sbjct: 1569 GGDGDDDINARGGFDLIDGGAGNDTINGGVGSDVLNGDGGNDTIIAGDGFDEVDGGAGDD 1628
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + G + + M + D + + G+ + ++
Sbjct: 1629 LLKGNAGNDFIAGGAGADRIEGGIGRDMLHGGDDDDDISGAEGFDEIFGDAGDDLLRGNA 1688
Query: 196 GAPK--GSLGNNIYKI------------EVQQKDSPFIQTIYDSGGDDLL-----DLTLI 236
G G G++ + + S ++ GDD L + L
Sbjct: 1689 GNDTIEGGAGDDRIEGGIGADTLRGGVGNDEIVASEGFDALFGEDGDDTLLGNAGNDLLE 1748
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG + ++ G + + + T ++++G G+D + G + +GND
Sbjct: 1749 GGAGMDALFGGQGADTLRGGDGDDILRGETGADTLIGGVGDDELRGGQGGDRLSGGAGND 1808
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ G SG D F + I D + L+ + L + I
Sbjct: 1809 ILVGGSGADVFVFEGGVDTITDMSLIVDRIEIDGDALGIAGLTGAQVLDQFAEAIGPSTQ 1868
Query: 357 KQRSILE 363
Sbjct: 1869 IVFDAAN 1875
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 49/351 (13%), Positives = 88/351 (25%), Gaps = 27/351 (7%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI--GGYEKNMTIAQHTVIESV 271
I T D G + + ++ + + + +
Sbjct: 1214 GAGGIIATFADGAGTVEDSWGNLDTFTDIDEIVGSQSDDVMEATGSTGVRFDGEDGDDLL 1273
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-----LYKIYRFENAII 326
+G+ +DV+ G ++ G D DG G DT + +
Sbjct: 1274 IGTDADDVLRGGDGDDEIHAGLGTDEIDGGEGSDTLVTDVTGLGPDQITVDLDPLAGSQT 1333
Query: 327 VYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ D L E D + +I+ +D+ +G+D +
Sbjct: 1334 IAGEGPGAADTLVGTENFTLTGDWDATVIGSDAANIITTGGGADDITTGLGRDTVNAGAG 1393
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
S G G D +R GSD + G G N F
Sbjct: 1394 DDVIDASAG------DLASEGFGDRIRPGLGSDTVLGSATLYAQGG--GINLAYFDVSGV 1445
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ + G + TF DD+
Sbjct: 1446 SGLTITVGVNGSGTVVSGTAGLVN---------DSFTFADVFGGSQDDDVITGTDRAEYE 1496
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
+ Y + V +GR F + Y+ + + + G D N
Sbjct: 1497 GFQGYGGNDVIDGR--GGFDEVYYLNASGAVQINLQNGSVTGADGTDTLLN 1545
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 52/439 (11%), Positives = 91/439 (20%), Gaps = 20/439 (4%)
Query: 44 ITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN 103
E A + + F + DI + D +
Sbjct: 541 FVEFTGGGNGTATDPWDGFDMFEGIEFVGGTRFQDIFVGDETDNIFHGEGGDDIFIGGAG 600
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
D D G+ +G + + + M
Sbjct: 601 NDFIDGGPGETEDDEDFDTLIYANETGEAGIFADMGTGLIVDTFGDTDTVVSIDRVIGTM 660
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
+ S Y D+ Y + ++ + D I
Sbjct: 661 DEDVFVGSDFQDFIQYVGLAGE-DVFFAGAAYETLRYREDDDFGALHGVYVDLAANFAID 719
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G +D + + G + N +A V + G G+D + G
Sbjct: 720 GFGDEDTIITD------------DGEIDRVRGSDFNDVLATSNVGARLEGEDGDDFLKGR 767
Query: 284 SANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+ +GND +G D + + +R + D
Sbjct: 768 LGEDRLEGDAGNDTILAGAGDDQLSDGRGFDYLNGGAGWDLFFRDIGQDFEDFSWTPVVD 827
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
D + + ++ LI G + ES + G D
Sbjct: 828 LTEGKFFDPSEDPALFDILENIEAVSLEGNFNMTLIGDDGDNFLESDAGNDLLEGNGGDD 887
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
N Y G E LE + L
Sbjct: 888 ELDGGDGDDTLNGGDGNDLLFGGEGNDGLYGDAGDDELYGEAGDDTLEGGDGDDYLNGGG 947
Query: 457 ADAPDLVQVGKDHFSNFGC 475
+ G D G
Sbjct: 948 GNDVINGGDGDDFIDIGGS 966
Score = 39.0 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 67/462 (14%), Positives = 111/462 (24%), Gaps = 66/462 (14%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D G T+ + + G + G D D
Sbjct: 909 GGEGNDGLYGDAGDDELYGEAGDDTLEGGDGDDYL---------NGGGGNDVINGGDGDD 959
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
D + V + + + G+ IY++ +
Sbjct: 960 FIDIGGSGVATVDGGEGWDTYFVD-------------------LTGFNPGDFIYELNLIT 1000
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ ++ + I + + + + G + + + G
Sbjct: 1001 GYAGVFGNPFN---------SDFVADVEEILVEGDLETRLTGTNEREIFNGGDGNDEITG 1051
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ G+D +IGN N+ G D G G DT + + + Y
Sbjct: 1052 NGGDDELIGNDGNDTLIGGDGRDFLAGGDGDDTLDASTGAASTQGFG------DYIRAGL 1105
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGL 391
+ + L A + ID SY DL + G + G
Sbjct: 1106 GSNTIIGHAALFAAGEGIDI-------------SYADLAGIGGVTITVGANGTGTTVSGT 1152
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
D TF Y D GS+ G + F L Y D
Sbjct: 1153 PGQVDDTFTFAHYFEGSRDGDTFTGSNNADFEGWVGLDGADDFDGGGGFDVLFY-----D 1207
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTF-DSYLYLGSYDDLRNVFGSDRGAAARHY 510
A+ A ++ D G TF D +GS D G
Sbjct: 1208 TDEAYGGAGGIIATFADGAGTVEDSWGNLDTFTDIDEIVGSQSDDVMEATGSTGVRFD-- 1265
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G DA L +++ G D
Sbjct: 1266 GEDGDDLLIGTDADDVLRGGDGDDEIHAGLGTDEIDGGEGSD 1307
>gi|297537910|ref|YP_003673679.1| outer membrane adhesin-like protein [Methylotenera sp. 301]
gi|297257257|gb|ADI29102.1| outer membrane adhesin like proteiin [Methylotenera sp. 301]
Length = 3158
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 49/158 (31%), Gaps = 6/158 (3%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
E I G+ + + + + + G GND + G N++ +GND G G D
Sbjct: 2846 GNEGRDYIQGFGGDDILIGNGGADYLDGGIGNDTLNGGDGNDILVGGAGNDTLIGGLGDD 2905
Query: 306 TFFYYAPSYLYKIYRFENAIIV-----YDANEHKQDFLSDVERLRFADQCI-DSVNVKQR 359
+ + + E V Y+ + + + ++E + +
Sbjct: 2906 IYRIDSAGDVITENAGEGVDTVEIDAGYNVGTYNMNLVPNIENVLLNGSLNSNVTGNAAD 2965
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ + L G D K G DI
Sbjct: 2966 NRITGNDGNNILDGGAGNDRLIGGKGNDTLIGGTGNDI 3003
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 3/132 (2%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
LG++IY+I+ I G D + ++L + + N
Sbjct: 2902 LGDDIYRIDS---AGDVITENAGEGVDTVEIDAGYNVGTYNMNLVPNIENVLLNGSLNSN 2958
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G+ GN+++ G + N+ GND G +G D F +
Sbjct: 2959 VTGNAADNRITGNDGNNILDGGAGNDRLIGGKGNDTLIGGTGNDIFEWNLSDKGSIGIPN 3018
Query: 322 ENAIIVYDANEH 333
+ I + +
Sbjct: 3019 VDTITDFTYANN 3030
>gi|254561411|ref|YP_003068506.1| hypothetical protein METDI2994 [Methylobacterium extorquens DM4]
gi|254268689|emb|CAX24648.1| hypothetical protein METDI2994 [Methylobacterium extorquens DM4]
Length = 1022
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 46/247 (18%), Positives = 69/247 (27%), Gaps = 56/247 (22%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
FD Y +Y D+ G RHY+ HG EGR+P A F L Y H A
Sbjct: 20 PFFDPAFYRSAYPDVAAGGGD----PLRHYLDHGWLEGRDPSAVFSTLFYADRHF-ADRA 74
Query: 456 FADAPDLVQV-GKDHFSNFGCEEGRF----------VTFDSYLYLGSYDDLRNVFGSDRG 504
+ + G FD+ Y R
Sbjct: 75 AINPLLHYAALSPTERLRVATQPGPDFPSLQAGVVEPYFDAPYYA------RLAGLEGGE 128
Query: 505 AAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE--- 560
HY+T G + G +P+ F Y+ H + +P A
Sbjct: 129 DPLTHYLTKGWRRGLDPNDAFSGDAYLQRHAHMRR-LGVSPLYHFAATRRLQASEAAAPP 187
Query: 561 ------------------------EGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
E + F+ + YL + D+ +H++
Sbjct: 188 ARRAKPQAALLPADPAEASDAQIYETVAAAFDREHYLDTNPDIRR----SGIDPVRHFLD 243
Query: 597 HGMKEGR 603
G +E R
Sbjct: 244 FGAREDR 250
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/306 (16%), Positives = 82/306 (26%), Gaps = 64/306 (20%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSY 408
++ Y ++Y D+ G D +H+ + G EGRD + F + Y +
Sbjct: 14 DAAIAAPFFDPAFYRSAYPDVAAG-GGDPL---RHYLDHGWLEGRDPSAVFSTLFYADRH 69
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN---AFADAPDLVQV 465
R AA + F +L+ A + +
Sbjct: 70 FADRAAINPLLHYAALSPTERLRVATQPGPDFPSLQAGVVEPYFDAPYYARLAGLEGGED 129
Query: 466 GKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-- 521
H+ G G F YL + +R + + H+ +
Sbjct: 130 PLTHYLTKGWRRGLDPNDAFSGDAYLQRHAHMRRLG----VSPLYHFAATRRLQASEAAA 185
Query: 522 ------------------------------DAFKALEYIASHEDLINAFADAPDLVQAGK 551
AF Y+ ++ D+ + P
Sbjct: 186 PPARRAKPQAALLPADPAEASDAQIYETVAAAFDREHYLDTNPDIRRS-GIDP------V 238
Query: 552 DHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISG 609
HF +FG E R S F+ Y Y G+ HY+ GRA G
Sbjct: 239 RHFLDFGAREDRDPSPDFSVRFYRKHY---RREIGAG-VNPFFHYL----AVGRARGFRP 290
Query: 610 MQFKSV 615
F
Sbjct: 291 TPFGLG 296
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 17/107 (15%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F Y +++ D+ D H+ + G+ EGR + F+ Y +
Sbjct: 22 FDPAFYRSAYPDVAAGGGDP-------LRHYLDHGWLEGRDPSAVFSTLFYADRH----- 69
Query: 582 VFGS-DRSAAAQHYITHGMKEG-RALGISGMQFKSVMNLSEKSRDKA 626
F HY E R G F S+ + A
Sbjct: 70 -FADRAAINPLLHYAALSPTERLRVATQPGPDFPSLQAGVVEPYFDA 115
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA-LGISGMQFKSVMNLSEKSR 623
F+P Y ++Y D+ + +HY+ HG EGR + F + + ++++
Sbjct: 20 PFFDPAFYRSAYPDV----AAGGGDPLRHYLDHGWLEGRDPSAVFSTLFYADRHFADRAA 75
>gi|212633886|ref|YP_002310411.1| hemolysin-type calcium binding protein [Shewanella piezotolerans
WP3]
gi|212555370|gb|ACJ27824.1| Hemolysin-type calcium binding protein [Shewanella piezotolerans
WP3]
Length = 1338
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 47/360 (13%), Positives = 88/360 (24%), Gaps = 42/360 (11%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
E + TI G+D + G N TI
Sbjct: 635 TTGSGEDLIEAGNGNDTINSGSGNDTI----------------------YGGAGNDTINT 672
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ G++G DV+ + N+ + +GND + +G D + + +
Sbjct: 673 GAGDDIAYGAAGEDVINSGAGNDTIYGGAGNDTINTGAGDDKAY--GGAGDDMLTNTGAG 730
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E D L+ + + L + + +
Sbjct: 731 DTAL-YGEEGHDTLTG-----YYRANNTLDGGEGNDTLTMNSISS--SYRDSSNSLRGGR 782
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
F + G D + LG D+ G D + + G
Sbjct: 783 GDDSFTMGYGSDTY---HYDLGDGHDVIRDKGYDSSQDETKHRRDTLVLGAGITREMVSF 839
Query: 445 YIASHEDLINAFADAPDLVQVGKD---HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
S ++I D + G + F S D + +
Sbjct: 840 THDSAGNIIITITDPDNAANNGSIMVMGAYTSSTYRIEGIEFSGDESGASNLDEAAILAA 899
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
G + T G + L ++ + + A D +N G +
Sbjct: 900 AEGM----FGTDGDDALTGTSMSETLYGGEGNDVIHTGSGEDIAYGGADNDTLTNTGAGD 955
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 68/515 (13%), Positives = 127/515 (24%), Gaps = 53/515 (10%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE-IG 129
E+ T + D+ T L H+ +
Sbjct: 685 EDVINSGAGNDTIYGGAGNDTINTGAGDDKAYGGAGDDMLTNTGAGDTALYGEEGHDTLT 744
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
+ G +++ + ++ + DS + D
Sbjct: 745 GYYRANNTLDGGEGNDTLTMNSISSSYRDSSNSLRGGRGDDSFTMGYGSDTYHYDLGDGH 804
Query: 190 AVQKIYGAPKGSLGN----NIYKIEVQQKDSPFIQTIYDSGGDDLL---DLTLIGGVKNY 242
V + G + + T +DS G+ ++ D +
Sbjct: 805 DVIRDKGYDSSQDETKHRRDTLVLGAGITREMVSFT-HDSAGNIIITITDPDNAANNGSI 863
Query: 243 IDLNTESWSSI-----------GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ + + S+ G A E + G+ G+D + G S + +
Sbjct: 864 MVMGAYTSSTYRIEGIEFSGDESGASNLDEAAILAAAEGMFGTDGDDALTGTSMSETLYG 923
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GNDV SG D + + + E D L+ +
Sbjct: 924 GEGNDVIHTGSGEDIAY--GGADNDTLTNTGAGDTAL-YGEEGHDTLTG-----YYRANN 975
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ L + + + F + G D + LG D+
Sbjct: 976 TLDGGEGNDTLTMNSISS--SYRDSSNSLRGGRGDDSFTMGYGSDTY---HYDLGDGHDV 1030
Query: 412 RNVFGSDRGAAARHYITHGV-------KEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
G D + + +E + A I + D NA + +V
Sbjct: 1031 IRDKGYDSSQDETKHRRDTLVLGAGITREMVSFTHDSAGNIIITITDPDNAANNGSIMVM 1090
Query: 465 VGKD------HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY-ITHGVKE 517
F +E D L + +++ GSD I +G
Sbjct: 1091 GAYTSSTYRIEGIEFSGDESGASNLDEAAILAALEEMHGTEGSDVIQGTSTADIIYGENG 1150
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G L + L D + GKD
Sbjct: 1151 G------DTLYGRKGADKLFGGSGDDKLVGGGGKD 1179
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 42/140 (30%), Gaps = 7/140 (5%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
TE I G I +++ G G D + G S ++ G D+ G SG D
Sbjct: 1129 GTEGSDVIQGTSTADIIYGENGGDTLYGRKGADKLFGGSGDDKLVGGGGKDLLIGGSGDD 1188
Query: 306 TFFYYAPS-------YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ +++ D +++ + + +V
Sbjct: 1189 QLIGGGGGDTLNGGEGSDNLKGSAGNDTYLFSSDFGNDVINNYDSNSSSIDTAIFNDVSI 1248
Query: 359 RSILEYTASYEDLIQVIGQD 378
+ + I VIG D
Sbjct: 1249 EELWFSRDGNDLQINVIGTD 1268
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 52/350 (14%), Positives = 97/350 (27%), Gaps = 25/350 (7%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
G +++ ND+ + + + D ++G +++ IYG
Sbjct: 646 GNGNDTINSGSGNDTIYGGAGNDTINTGAGDDIAYGAAGEDVINSGAGNDTIYGGAGN-- 703
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
Y GDD+L T G + + G Y N T+
Sbjct: 704 --------DTINTGAGDDKAYGGAGDDML--TNTGAGDTALYGEEGHDTLTGYYRANNTL 753
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++ +S + +S + G+D F G DT+ Y I +
Sbjct: 754 DGGEGNDTLTMNSISSSYRDSSNS--LRGGRGDDSFTMGYGSDTYHYDLGDGHDVIRD-K 810
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D +H++D L + A + V+ S + D
Sbjct: 811 GYDSSQDETKHRRDTL-----VLGAGITREMVSFTHDSAGNIIITITDPDNAANNGSIMV 865
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
M + I F S D + AA + T G +
Sbjct: 866 MGAYTSSTYRI-EGIEFSGDESGASNLDEAAILA----AAEGMFGTDGDDALTGTSMSET 920
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
L ++ + + D +N G + + + L Y
Sbjct: 921 LYGGEGNDVIHTGSGEDIAYGGADNDTLTNTGAGDTALYGEEGHDTLTGY 970
Score = 37.5 bits (85), Expect = 8.5, Method: Composition-based stats.
Identities = 42/369 (11%), Positives = 94/369 (25%), Gaps = 42/369 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE-IGHALG 133
+ + S + D T L H+ +
Sbjct: 913 TGTSMSETLYGGEGNDVIHTGSGEDIAYGGADNDTLTNTGAGDTALYGEEGHDTLTGYYR 972
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ G +++ + ++ + DS + D V +
Sbjct: 973 ANNTLDGGEGNDTLTMNSISSSYRDSSNSLRGGRGDDSFTMGYGSDTYHYDLGDGHDVIR 1032
Query: 194 IYGAPKGSLGN----NIYKIEVQQKDSPFIQTIYDSGGDDLL---DLTLIGGVKNYIDLN 246
G + + T +DS G+ ++ D + + +
Sbjct: 1033 DKGYDSSQDETKHRRDTLVLGAGITREMVSFT-HDSAGNIIITITDPDNAANNGSIMVMG 1091
Query: 247 TESWSS--IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ S+ I G E + + + ++ + + + G ++V +S D+ G +G
Sbjct: 1092 AYTSSTYRIEGIEFSGDESGASNLDEAAILAALEEMHGTEGSDVIQGTSTADIIYGENGG 1151
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT + + +L V + +L
Sbjct: 1152 DTLYGRKGAD----------------------------KLFGGSGDDKLVGGGGKDLLIG 1183
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ + LI G D + S G D +D+ N + S+ +
Sbjct: 1184 GSGDDQLIGGGGGDTLNGGEGSDNLKGSAGNDTYL---FSSDFGNDVINNYDSNSSSIDT 1240
Query: 425 HYITHGVKE 433
E
Sbjct: 1241 AIFNDVSIE 1249
>gi|116254749|ref|YP_770585.1| calcium-binding domain-containing protein [Rhizobium leguminosarum
bv. viciae 3841]
gi|115259397|emb|CAK10534.1| putative calcium-binding cadherin-like RTX protein Exported via
PrsDE Type I secretion [Rhizobium leguminosarum bv.
viciae 3841]
Length = 589
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 50/294 (17%), Positives = 83/294 (28%), Gaps = 14/294 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ T D D+ G G I+ I LG
Sbjct: 89 GGAGNDLLRGGNGNDTLDGGDGNDWLAGRDGNDILNGGDGNDQIIDDVGNDVIRGGLGND 148
Query: 136 HPGSYNGG--YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ G P N + D ++ D + I ++
Sbjct: 149 TISDGDAGGRNPEVFDINAGDGDDAISVKGQGSGTIDGGAGIDTLQASELRGLTIKNIEV 208
Query: 194 IYGAPKGSLG--------NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ G + I + + DS DL D G
Sbjct: 209 LETVGYWVAGSSAQFESFDTIVWSTDPFHNFNPALAVTDSAHLDLSDELGDRGAFVT--- 265
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
S + + + GS GND++ G + N+ +GND +G +G+D
Sbjct: 266 GYVSGVDVKTGGGSDEFTGTDGNDIFDGSGGNDIINGKAGNDKLTGGAGNDTINGGAGID 325
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
T + Y + N+ + + +D L+DVE +RFAD D
Sbjct: 326 TAIFSGNFVNYS-FALNNSDHILTSALEGKDTLTDVEFVRFADGVYDFAKGTFT 378
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/326 (15%), Positives = 92/326 (28%), Gaps = 34/326 (10%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ G + D +++ G + I +++ G G D + G + N++
Sbjct: 40 VISDSGTVDLADELGSGSANVTGSNGDNAITTGAGNDNIDGGEGADTLNGGAGNDLLRGG 99
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+GND DG G D + + + + D + + +D
Sbjct: 100 NGNDTLDGGDGND--WLAGRDGNDILNGGDGNDQIIDDVGNDVIRG-GLGNDTISDGDAG 156
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
N + I ++ G + SE R +T + L
Sbjct: 157 GRNPEVFDINAGDGDDAISVKGQGSGTIDGGAGIDTLQASELRGLTIKNIEVLE------ 210
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
T G + F++ + I D + F A + S+
Sbjct: 211 ---------------TVGYWVAGSSAQFESFDTIVWSTDPFHNFNPALAVTDSAHLDLSD 255
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
+ G FVT S D++ GSD T G + A
Sbjct: 256 ELGDRGAFVT-----GYVSGVDVKTGGGSDEFT-----GTDGNDIFDGSGGNDIINGKAG 305
Query: 533 HEDLINAFADAPDLVQAGKDHFSNFG 558
++ L + AG D G
Sbjct: 306 NDKLTGGAGNDTINGGAGIDTAIFSG 331
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 45/333 (13%), Positives = 85/333 (25%), Gaps = 25/333 (7%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRY-DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
E + + + S++G V S + + G G I +
Sbjct: 29 SEINPLLSVNLVISDSGTVDLADELGSGSANVTGSNGDNAITTGAGNDNIDGGEGADTL- 87
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
NGG + ND+ + ++ D G + D V
Sbjct: 88 -----------NGGAGNDLLRGGNGNDTLDGGDGNDWLAGRDGNDILNGGDGNDQIIDDV 136
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
I G LGN+ +P + I GDD + + G ID
Sbjct: 137 GNDVIRGG----LGNDTISDGDAGGRNPEVFDINAGDGDDAISVKGQGSG--TIDGGAGI 190
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD------GSSG 303
+ + +TI V+E+V S + + + + F+ S+
Sbjct: 191 DTLQASELRGLTIKNIEVLETVGYWVAGSSAQFESFDTIVWSTDPFHNFNPALAVTDSAH 250
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
LD + + + + + L
Sbjct: 251 LDLSDELGDRGAFVTGYVSGVDVKTGGGSDEFTGTDGNDIFDGSGGNDIINGKAGNDKLT 310
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
A + + G D +F + +
Sbjct: 311 GGAGNDTINGGAGIDTAIFSGNFVNYSFALNNS 343
>gi|85706410|ref|ZP_01037504.1| putative RTX toxin [Roseovarius sp. 217]
gi|85669183|gb|EAQ24050.1| putative RTX toxin [Roseovarius sp. 217]
Length = 1655
Score = 73.7 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 44/328 (13%), Positives = 85/328 (25%), Gaps = 29/328 (8%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E ++ + P + +AD++ G T+L N +G
Sbjct: 1288 VEDTVGLLLTITDVEENDTSQPIATPGPDSIVGGAEADIFNGLAGDDTMLGGNGDDTLG- 1346
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
GS N ++ S ++ + A D+++
Sbjct: 1347 ------GGSGNDMVLGEDGNDSLGGGSGSDTLNGGSGNDTLGGGLDDDFLAGGSGDDVLS 1400
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ G+D +L GG N +
Sbjct: 1401 AD---------------TGNDVIGGGEGDDVLRGGSGND----SLYGGDGNDGVAGGQGD 1441
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + IA +++ G+SGND + G + SG+DV G D+
Sbjct: 1442 DLLKGGAGDDWIAGGAGADTIFGASGNDTIGGGVGVDSIHAGSGDDVIAAGGGDDSV--N 1499
Query: 311 APSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + + D + + + +L + +
Sbjct: 1500 GGIGHDTILGGDGQDALNGGAGRDNIDGGAGDDSIDGGLGTDLLQGGLGDDLLFGGGAND 1559
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDI 397
L G D + G D+
Sbjct: 1560 TLDGGAGADTLRGGEGNDVLTGGFGADV 1587
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/270 (15%), Positives = 73/270 (27%), Gaps = 18/270 (6%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
G + T+ +++ G SGND+V+G N+ SG+D +G SG D
Sbjct: 1320 GGAEADIFNGLAGDDTMLGGNGDDTLGGGSGNDMVLGEDGNDSLGGGSGSDTLNGGSGND 1379
Query: 306 TF-------FYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVK 357
T F S + ++ S + L D +
Sbjct: 1380 TLGGGLDDDFLAGGSGDDVLSADTGNDVIGGGEGDDVLRGGSGNDSLYGGDGNDGVAGGQ 1439
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+L+ A + + G D G G D ++ GS DD+ G
Sbjct: 1440 GDDLLKGGAGDDWIAGGAGADTIFGASGNDTIGGGVGVD-----SIHAGSGDDVIAAGGG 1494
Query: 418 DRGAA-----ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
D G ++ A + + +G D
Sbjct: 1495 DDSVNGGIGHDTILGGDGQDALNGGAGRDNIDGGAGDDSIDGGLGTDLLQGGLGDDLLFG 1554
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
G + + G + G
Sbjct: 1555 GGANDTLDGGAGADTLRGGEGNDVLTGGFG 1584
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 67/259 (25%), Gaps = 9/259 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D T S D G G + + IG G
Sbjct: 1356 GEDGNDSLGGGSGSDTLNGGSGNDTLGGGLDDDFLAGGSGDDVLSADTGNDVIGGGEGDD 1415
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+G +YG D + + D + G S +
Sbjct: 1416 VLRGGSGNDSLYGGDGNDGVAGGQGDDLLKGGAGDDWIAGGAGADTIFGASGNDTIGGGV 1475
Query: 196 GAPKGSLGNN-----IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G G+ + TI G D L G ++ ID
Sbjct: 1476 GVDSIHAGSGDDVIAAGGGDDSVNGGIGHDTILGGDGQDAL---NGGAGRDNIDGGAG-D 1531
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
SI G + + + G ND + G + + GNDV G G D F +
Sbjct: 1532 DSIDGGLGTDLLQGGLGDDLLFGGGANDTLDGGAGADTLRGGEGNDVLTGGFGADVFVFA 1591
Query: 311 APSYLYKIYRFENAIIVYD 329
+ + F++ + +
Sbjct: 1592 SSDGADTVSDFQDGVDLLV 1610
>gi|23954242|emb|CAD42039.1| HlyA protein [Escherichia coli]
Length = 1024
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 52/177 (29%), Gaps = 26/177 (14%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ + ++ + G + D G I + I G + N + +
Sbjct: 707 GTDLTETDNLYSVEELIGTNRADKF-FGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGND 765
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G +G+D + G N+ GN+ +G G D S
Sbjct: 766 TLRGGNGDDQLYGGDGNDKLTGGVGNNYLNGGDGDDELQVQGNS---------------- 809
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+V L + +L+ + L G D++ + +
Sbjct: 810 -------LAKNV--LSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 39.0 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 78/287 (27%), Gaps = 24/287 (8%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------APSYLYKIYRFENAIIV 327
G+D V ++ + + G+DV DT + + Y + R +
Sbjct: 617 GDGDDKVFLSAGSANIYAGKGHDVVYY-DKTDTGYLTIDGTKATEAGNYTVTRVLGGDVK 675
Query: 328 YDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E + E+ ++ +N + + S E+LI D F K
Sbjct: 676 VLQEVVKEQEVSVGKRTEKTQYRSYEFTHINGTDLTETDNLYSVEELIGTNRADKFFGSK 735
Query: 385 HFYEFGLSEGRD----ITFDSYLYLGSYDDLRNV-------FGSDRGAAARHYITHGVKE 433
F ++G D + LY +D +G D + +
Sbjct: 736 FTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLTGGVGNNYLN 795
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV---TFDSYLYLG 490
G + D ++ + +++++ L + G D Y YL
Sbjct: 796 GGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLS 855
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
Y + + + Y A L
Sbjct: 856 GYGHHIIDDDGGKDDKLSLADIDFRDVAFKREGNDLIMYKAEGNVLS 902
>gi|35505497|gb|AAH57788.1| Matrix metallopeptidase 11 (stromelysin 3) [Homo sapiens]
Length = 488
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 63/199 (31%), Gaps = 60/199 (30%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEET 73
L W + Y+ + QE R AL WS V LTF E
Sbjct: 100 LSGGRWEKTDLTYRILRFPWQLV-----------QEQVRQTMAEALKVWSDVTPLTFTEV 148
Query: 74 SIH-SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
+DI + + +P+ +++FD + W G +G
Sbjct: 149 HEGRADIMIDFARYWHGDDLPFDGPGGILAHAFSPKTHRE--GDVHFDYDETWTIGDDQG 206
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T L A HE GH LGL H + ++MS F +F
Sbjct: 207 TDLLQVAAHEFGHVLGLQHT-------------------TAAKALMSAF--------YTF 239
Query: 178 GYCATPMVSDIVAVQKIYG 196
Y + D VQ +YG
Sbjct: 240 RYPLSLSPDDCRGVQHLYG 258
>gi|110643969|ref|YP_671699.1| hemolysin A [Escherichia coli 536]
gi|110345561|gb|ABG71798.1| hemolysin A [Escherichia coli 536]
Length = 1024
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 52/177 (29%), Gaps = 26/177 (14%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ + ++ + G + D G I + I G + N + +
Sbjct: 707 GTDLTETDNLYSVEELIGTNRADKF-FGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGND 765
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G +G+D + G N+ GN+ +G G D S
Sbjct: 766 TLRGGNGDDQLYGGDGNDKLTGGVGNNYLNGGDGDDELQVQGNS---------------- 809
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+V L + +L+ + L G D++ + +
Sbjct: 810 -------LAKNV--LSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 38.2 bits (87), Expect = 4.0, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 77/287 (26%), Gaps = 24/287 (8%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------APSYLYKIYRFENAIIV 327
G+D V + + + G+DV DT + + Y + R +
Sbjct: 617 GDGDDKVFLAAGSANIYAGKGHDVVYY-DKTDTGYLTIDGTKATEAGNYTVTRVLGGDVK 675
Query: 328 YDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E + E+ ++ +N + + S E+LI D F K
Sbjct: 676 VLQEVVKEQEVSVGKRTEKTQYRSYEFTHINGTDLTETDNLYSVEELIGTNRADKFFGSK 735
Query: 385 HFYEFGLSEGRD----ITFDSYLYLGSYDDLRNV-------FGSDRGAAARHYITHGVKE 433
F ++G D + LY +D +G D + +
Sbjct: 736 FTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLTGGVGNNYLN 795
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV---TFDSYLYLG 490
G + D ++ + +++++ L + G D Y YL
Sbjct: 796 GGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLS 855
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
Y + + + Y A L
Sbjct: 856 GYGHHIIDDDGGKDDKLSLADIDFRDVAFKREGNDLIMYKAEGNVLS 902
>gi|148232850|ref|NP_001079811.1| stromelysin-3 precursor [Xenopus laevis]
gi|1705990|sp|Q11005|MMP11_XENLA RecName: Full=Stromelysin-3; Short=ST3; AltName: Full=Matrix
metalloproteinase-11; Short=MMP-11; Flags: Precursor
gi|414918|emb|CAA81616.1| stromelysin-3 [Xenopus laevis]
Length = 477
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 60/196 (30%), Gaps = 52/196 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + YK + + AL WS+V LTF E
Sbjct: 88 LSGGRWDKTNLTYKIIRFPWQLSKVKV-------RRTIAEALKVWSEVTPLTFTEVHEGR 140
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
SDI + + P+ +++FD + W G GT L
Sbjct: 141 SDIIIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDEAWTIGNNIGTDLL 198
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H S S+MS +F Y
Sbjct: 199 QVAAHEFGHMLGLQHS-------------------SISKSLMS--------PFYTFRYPL 231
Query: 182 TPMVSDIVAVQKIYGA 197
+ D +Q +YGA
Sbjct: 232 SLSADDKHGIQFLYGA 247
>gi|321471531|gb|EFX82503.1| hypothetical protein DAPPUDRAFT_316218 [Daphnia pulex]
Length = 550
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 72/198 (36%), Gaps = 51/198 (25%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
++ +W + YK T D+ +E+AR A W+ V DL F + S
Sbjct: 159 IQGSHWPKKQLTYKIKKYTPDMSPSDV------DREIAR-AFQMWADVTDLAFVHVNNQS 211
Query: 78 ---DIKFISSNNGYVCTPRYDSR------------YFMEINFDKADVWRYGIGKGTILSH 122
DI + + + P ++ Y + +FD+ + W KGT L
Sbjct: 212 ADVDIDILFATGEHGSCPSFNDGPGGTLAHATYPIYGGDAHFDEGETWTLDSVKGTNLFQ 271
Query: 123 NALHEIGHALGLMHPG-SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH+LGL H + YP YG D++ D
Sbjct: 272 VATHEFGHSLGLEHTHVTTAVMYPFYGYSPDFKLDK------------------------ 307
Query: 182 TPMVSDIVAVQKIYGAPK 199
DI +Q++YG +
Sbjct: 308 ----DDIEGIQELYGKNQ 321
>gi|110644662|ref|YP_672392.1| hemolysin A [Escherichia coli 536]
gi|110346254|gb|ABG72491.1| hemolysin A [Escherichia coli 536]
Length = 1024
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 52/177 (29%), Gaps = 26/177 (14%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ + ++ + G + D G I + I G + N + +
Sbjct: 707 GTDLTETDNLYSVEELIGTNRADKF-FGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGND 765
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G +G+D + G N+ GN+ +G G D S
Sbjct: 766 TLRGGNGDDQLYGGDGNDKLTGGVGNNYLNGGDGDDELQVQGNS---------------- 809
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+V L + +L+ + L G D++ + +
Sbjct: 810 -------LAKNV--LSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 39.0 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 78/287 (27%), Gaps = 24/287 (8%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------APSYLYKIYRFENAIIV 327
G+D V ++ + + G+DV DT + + Y + R +
Sbjct: 617 GDGDDKVFLSAGSANIYAGKGHDVVYY-DKTDTGYLTIDGTKATEAGNYTVTRVLGGDVK 675
Query: 328 YDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E + E+ ++ +N + + S E+LI D F K
Sbjct: 676 VLQEVVKEQEVSVGKRTEKTQYRSYEFTHINGTDLTETDNLYSVEELIGTNRADKFFGSK 735
Query: 385 HFYEFGLSEGRD----ITFDSYLYLGSYDDLRNV-------FGSDRGAAARHYITHGVKE 433
F ++G D + LY +D +G D + +
Sbjct: 736 FTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLTGGVGNNYLN 795
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV---TFDSYLYLG 490
G + D ++ + +++++ L + G D Y YL
Sbjct: 796 GGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLS 855
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
Y + + + Y A L
Sbjct: 856 GYGHHIIDDDGGKDDKLSLADIDFRDVAFKREGNDLIMYKAEGNVLS 902
>gi|24528030|emb|CAD33759.1| hemolysin A [Escherichia coli]
Length = 1024
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 52/177 (29%), Gaps = 26/177 (14%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ + ++ + G + D G I + I G + N + +
Sbjct: 707 GTDLTETDNLYSVEELIGTNRADKF-FGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGND 765
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G +G+D + G N+ GN+ +G G D S
Sbjct: 766 TLRGGNGDDQLYGGDGNDKLTGGVGNNYLNGGDGDDELQVQGNS---------------- 809
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+V L + +L+ + L G D++ + +
Sbjct: 810 -------LAKNV--LSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 38.2 bits (87), Expect = 4.0, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 77/287 (26%), Gaps = 24/287 (8%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------APSYLYKIYRFENAIIV 327
G+D V + + + G+DV DT + + Y + R +
Sbjct: 617 GDGDDKVFLAAGSANIYAGKGHDVVYY-DKTDTGYLTIDGTKATEAGNYTVTRVLGGDVK 675
Query: 328 YDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E + E+ ++ +N + + S E+LI D F K
Sbjct: 676 VLQEVVKEQEVSVGKRTEKTQYRSYEFTHINGTDLTETDNLYSVEELIGTNRADKFFGSK 735
Query: 385 HFYEFGLSEGRD----ITFDSYLYLGSYDDLRNV-------FGSDRGAAARHYITHGVKE 433
F ++G D + LY +D +G D + +
Sbjct: 736 FTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLTGGVGNNYLN 795
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV---TFDSYLYLG 490
G + D ++ + +++++ L + G D Y YL
Sbjct: 796 GGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLS 855
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
Y + + + Y A L
Sbjct: 856 GYGHHIIDDDGGKDDKLSLADIDFRDVAFKREGNDLIMYKAEGNVLS 902
>gi|254474651|ref|ZP_05088037.1| hypothetical protein RR11_486 [Ruegeria sp. R11]
gi|214028894|gb|EEB69729.1| hypothetical protein RR11_486 [Ruegeria sp. R11]
Length = 605
Score = 73.7 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/296 (15%), Positives = 80/296 (27%), Gaps = 24/296 (8%)
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
+ ND +T S P + T VS AV+ + +
Sbjct: 292 FMDVNDDGLADIVTDRSSVNGPNAFINTGGHFVPVTADVSIWNAVEFYTLLDPNNE--TV 349
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ I+ + + L+ G I + E+ G E TI
Sbjct: 350 WGIKPYDNTLEIAE----------IPLSFYGAN---ISVRNEAGIVRVGTEAGDTINGGA 396
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++ G GND V G S N+ G D G + DT K++ +
Sbjct: 397 ARDNLNGGLGNDRVEGYSGNDALRGGRGLDTLVGGAQNDTL--DGGIGHDKLFGNHGLDV 454
Query: 327 VYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ + + ++L L+ ++ L G DV
Sbjct: 455 LRGGSGNDTLNAGIGRDKLFGNHGRDILRAGSGNDTLDGGVGHDKLFGERGMDVLRGGSG 514
Query: 386 FYEFGLSEGRDITFDSY------LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
GRD F S +D+ F + + +
Sbjct: 515 NDTLNGGGGRDRLFGGAGSDTFVFGANSGNDVIRDFVAGEDSVHITSGATSFADLT 570
>gi|119493877|ref|ZP_01624442.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
gi|119452389|gb|EAW33580.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
Length = 538
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 78/204 (38%), Gaps = 22/204 (10%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDA--FKALEYIASHEDLIN 454
FD YL Y L+ + H+ G++ G + + Y+ + D+
Sbjct: 5 IFDEDYYLKKYPYLQPAIEQGIIQSGLDHFQRFGLQLGLTGVSRYYDEAYYLEKNPDVAE 64
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRF---VTFDSYLYLGSYDDLRNVFGSDRGA------ 505
A + G HF G EEGR + + Y + D+ D
Sbjct: 65 AV--NSGIFPSGLAHFIEIGYEEGRADISSDYHDFFYRQTNRDILPFIRVDTSESNGLFH 122
Query: 506 -AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG-YEEGR 563
A H++ G +EGR ++F EY+ + ++I A G+DH+ FG +EEGR
Sbjct: 123 NALEHFLKFGAEEGRYSNSFFEAEYLKQYPNIIPAIESGVLRT--GRDHYEQFGQFEEGR 180
Query: 564 SITFNPDLYLTSYDDLWNVFGSDR 587
TF + D+ FG+
Sbjct: 181 KATFIGTSSI----DILESFGTGE 200
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 15/134 (11%)
Query: 483 FDSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDA--FKALEYIASHEDLINA 539
FD YL Y L+ + H+ G++ G + + Y+ + D+ A
Sbjct: 6 FDEDYYLKKYPYLQPAIEQGIIQSGLDHFQRFGLQLGLTGVSRYYDEAYYLEKNPDVAEA 65
Query: 540 FADAPDLVQAGKDHFSNFGYEEGR---SITFNPDLYLTSYDDLWNVFGSD-------RSA 589
+ +G HF GYEEGR S ++ Y + D+ D
Sbjct: 66 V--NSGIFPSGLAHFIEIGYEEGRADISSDYHDFFYRQTNRDILPFIRVDTSESNGLFHN 123
Query: 590 AAQHYITHGMKEGR 603
A +H++ G +EGR
Sbjct: 124 ALEHFLKFGAEEGR 137
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI---TFNPDLYLTSY 576
N D F Y+ + L A ++Q+G DHF FG + G + ++ YL
Sbjct: 2 NFDIFDEDYYLKKYPYLQPAI--EQGIIQSGLDHFQRFGLQLGLTGVSRYYDEAYYLEKN 59
Query: 577 DDLWNVFGSDRS-AAAQHYITHGMKEGRA 604
D+ S + H+I G +EGRA
Sbjct: 60 PDVAEAVNSGIFPSGLAHFIEIGYEEGRA 88
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 66/172 (38%), Gaps = 18/172 (10%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF-ESMKHFYEFGLSEGR---DITFD 400
RF Q + + Y D+ + + +F + HF E G EGR +
Sbjct: 36 RFGLQLGLTGVSRYYDEAYYLEKNPDVAEAVNSGIFPSGLAHFIEIGYEEGRADISSDYH 95
Query: 401 SYLYLGSYDDLRNVFGSDR-------GAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
+ Y + D+ D A H++ G +EGR ++F EY+ + ++I
Sbjct: 96 DFFYRQTNRDILPFIRVDTSESNGLFHNALEHFLKFGAEEGRYSNSFFEAEYLKQYPNII 155
Query: 454 NAFADAPDLVQVGKDHFSNFGC-EEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
A G+DH+ FG EEGR TF + D+ FG+
Sbjct: 156 PAIESGVLRT--GRDHYEQFGQFEEGRKATFIGTSSI----DILESFGTGEV 201
>gi|329848198|ref|ZP_08263226.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843261|gb|EGF92830.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 502
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 55/384 (14%), Positives = 100/384 (26%), Gaps = 12/384 (3%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
P T S D ++ + + SI G + N I T +++ G
Sbjct: 17 GGPDNDTYTGSDSADTIEGRGGDDLLD----GGGGHDSIAGEDGNDQIYGGTGNDTLNGG 72
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D G + +++ G+D G +G DT+ A + + A +V +
Sbjct: 73 DGDDTAWGGTGHDMLNGGFGDDSLTGGTGNDTYVVNAVGDVIDEQSGQGADVVQASITFS 132
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ I+ + L S L G D + + ++
Sbjct: 133 LAGTYLEHLVLIGIANINGTGSASANSLTGNNSSNLLDGGDGSDTLTGAAGWDTYVVNTA 192
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
D+ + + G A L + + L
Sbjct: 193 SDVVIEVAGQGDDLVQAGVSYTLGDYVERMTLTGTGDINATGNSAHNQLIGNSGNNVLDG 252
Query: 455 AFADAPDLVQVGKDHFS----NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
A +G D + E D SY + V +
Sbjct: 253 ATGGDYLTGGLGNDTYYLDHSGDKIFELAGEGVDLAYSSVSYVLVGTVVENLILTGTADL 312
Query: 511 ITHGVKEGRNPDAFKALEYIA---SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
G G + ++ L D VQ+ D E +
Sbjct: 313 NATGNGVGNKLTGNSGNNVLDGLVGNDTLTGGLGDDTYYVQSSGDKVVEASGEGYDVVYA 372
Query: 568 NPDLYLT-SYDDLWNVFGSDRSAA 590
+ LT Y + + G+ A
Sbjct: 373 SATYTLTGRYAEELRLTGAADIEA 396
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 57/397 (14%), Positives = 97/397 (24%), Gaps = 19/397 (4%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ + D G G T + G + G Y V
Sbjct: 49 DSIAGEDGNDQIYGGTGNDTLNGGDGDDTAWGGTGHDMLNGGFG-DDSLTGGTGNDTYVV 107
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ + + + + + Y ++ I + A SL N
Sbjct: 108 NAVGDVIDEQSGQGADVVQASITFSLAGTYLEHLVLIGIANINGTGSASANSLTGN--NS 165
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----DLNTESWSSIGGYEKNMTIAQ 264
T+ + G D + V + DL S G
Sbjct: 166 SNLLDGGDGSDTLTGAAGWDTYVVNTASDVVIEVAGQGDDLVQAGVSYTLGDYVERMTLT 225
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T + G+S ++ +IGNS NNV ++G D G G DT++ KI+
Sbjct: 226 GTGDINATGNSAHNQLIGNSGNNVLDGATGGDYLTGGLGNDTYYLDHS--GDKIFELAGE 283
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + L + L G +V + +
Sbjct: 284 GVDLAYSSVSY-------VLVGTVVENLILTGTADLNATGNGVGNKLTGNSGNNVLDGLV 336
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G D + G + G D A+ Y G A
Sbjct: 337 GNDTLTGGLGDDTYY--VQSSGDKVVEASGEGYDVVYASATYTLTGRYAEELRLTGAADI 394
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ + + D V G + G
Sbjct: 395 EASGNSVGNVLVGNDGDNVLNGLGGNDSLTGGLGGDT 431
Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 46/331 (13%), Positives = 91/331 (27%), Gaps = 25/331 (7%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
+ + + ++ + D +D G T + + A + G
Sbjct: 147 ANINGTGSASANSLTGNNSSNLLDGGDGSDTLTGAAGWDTYVVNTASDVVIEVAGQGDDL 206
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
G G + + + + + ++ G
Sbjct: 207 VQAGVSYTLGDYVERMTLTGTGDINATGNSAHN---------------------QLIGNS 245
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
++ + + D GD + +L G Y + S+ +G +
Sbjct: 246 GNNVLDGATGGDYLTGGLGNDTYYLDHSGDKIFELAGEGVDLAYSSV---SYVLVGTVVE 302
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N+ I T + G+ + + GNS NNV GND G G DT++ +
Sbjct: 303 NL-ILTGTADLNATGNGVGNKLTGNSGNNVLDGLVGNDTLTGGLGDDTYYVQSSGDKVVE 361
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
E +VY + + E I++ ++L L + G D
Sbjct: 362 ASGEGYDVVYASATYTLTGRYAEELRLTGAADIEASGNSVGNVLVGNDGDNVLNGLGGND 421
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
F + G + D
Sbjct: 422 SLTGGLGGDTFLFTAGNRTDTVTDFSAVEGD 452
Score = 40.9 bits (94), Expect = 0.70, Method: Composition-based stats.
Identities = 43/298 (14%), Positives = 85/298 (28%), Gaps = 33/298 (11%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E ++ ++ N +S + D G+G T
Sbjct: 220 ERMTLTGTGDINATGNSAHNQLIGNSGNNVLDGATGGDYLTGGLGNDTYY---------- 269
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L H G GVD Y S ++ V+ + ++ ++ + AT
Sbjct: 270 ---LDHSGDKIFELAGEGVDLAY---SSVSYVLVGTVVENLILTGTADLNAT-------- 315
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G GN T+ GDD + ++ + E +
Sbjct: 316 ---GNGVGNKLTGN---SGNNVLDGLVGNDTLTGGLGDDTYYV--QSSGDKVVEASGEGY 367
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ T+ E + + + GNS NV + G++V +G G D+
Sbjct: 368 DVVYASAT-YTLTGRYAEELRLTGAADIEASGNSVGNVLVGNDGDNVLNGLGGNDSLTGG 426
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ V D + + D ++ D V ++++ +
Sbjct: 427 LGGDTFLFTAGNRTDTVTDFSAVEGDMINVNAYTGGVDNAGLVSQVGLNVVIDFGSGN 484
>gi|330808169|ref|YP_004352631.1| hypothetical protein PSEBR_a1432 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376277|gb|AEA67627.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 2855
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 81/294 (27%), Gaps = 16/294 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ D T D+ G I + T + + +
Sbjct: 2551 GAQDSTPDYHGSYTASDNHGGSDSAAVDISYQAGHTLTGTVGDDVLLAGNGDNILNAGDG 2610
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + SGN+ + G + N++ + +GND+ DG +G DT Y + +
Sbjct: 2611 NDILSAGSGNNTLHGGAGNDLLYSGAGNDLLDGGTGNDTASY--AHASAGVTVNLGLLAA 2668
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI---------GQD 378
+ D L+ +E L ++ + + ++ L G +
Sbjct: 2669 QNTVGAGTDTLTGIENLVGSNFNDTLTGDGASNRINGGLGHDVLNGGGGDDLLIGGPGNN 2728
Query: 379 VFESMKHFYEFGLSEGR---DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
F G D+ D + D + + G + A+ H G
Sbjct: 2729 TLTGGSGADTFQWQAGNSGHDVITDFAPGVDKLDLSQLLQGENGSTASLDDYLHFTISGS 2788
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+++ A N D H+ +G +
Sbjct: 2789 GGAVITSIDVSAIAGATPNQTID--LAGVNLASHYGVTPGVDGMIAGGADTATI 2840
>gi|300864914|ref|ZP_07109758.1| hypothetical protein OSCI_1150008 [Oscillatoria sp. PCC 6506]
gi|300337085|emb|CBN54908.1| hypothetical protein OSCI_1150008 [Oscillatoria sp. PCC 6506]
Length = 1995
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 67/174 (38%), Gaps = 17/174 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ T+ G+D + D L+G + + + G E N ++
Sbjct: 1820 DDWISGGLGEDTLCGDAGNDTVLGELGDDILLGNKGDDVVSGNAGQDIVWGGEGNDSLHG 1879
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ V G GND ++G++ ++ + G+D G +G D F I F
Sbjct: 1880 GNGNDLVCGGIGNDTLLGDNGDDTLYGGDGDDSLTGGAGNDVFVLTPSQGAGVITDF--- 1936
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVK--QRSILEYTASYEDLIQVIG 376
QDFL ++ L FAD I + + +I+ TAS + L+ + G
Sbjct: 1937 -------MVGQDFLKLIDNLSFADLTITPGSGERVGDTIIRVTASNQLLVSLTG 1983
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 47/171 (27%), Gaps = 11/171 (6%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GD+ + + I L S + G + I + +++ ND G +
Sbjct: 1762 GDNDANTLNGAIGDDSI-LGKGSNDVLFGNQGKDVIYGYAGNDTIDAGKDNDFGRGGQND 1820
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ G D G +G DT + + +V + QD + E
Sbjct: 1821 DWISGGLGEDTLCGDAGNDTVL--GELGDDILLGNKGDDVV--SGNAGQDIVWGGE---- 1872
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
++ + L+ G D G D+
Sbjct: 1873 --GNDSLHGGNGNDLVCGGIGNDTLLGDNGDDTLYGGDGDDSLTGGAGNDV 1921
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 45/184 (24%), Gaps = 7/184 (3%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ + L +++ G + +I + + G+ G DV+ G + N+ ND
Sbjct: 1753 SNPPHDVLLGDNDANTLNGAIGDDSILGKGSNDVLFGNQGKDVIYGYAGNDTIDAGKDND 1812
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDS 353
G D + + V E D L + +
Sbjct: 1813 FGRGGQNDD--WISGGLGEDTLCGDAGNDTVL--GELGDDILLGNKGDDVVSGNAGQDIV 1868
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ L + + IG D +G D
Sbjct: 1869 WGGEGNDSLHGGNGNDLVCGGIGNDTLLGDNGDDTLYGGDGDDSLTGGAGNDVFVLTPSQ 1928
Query: 414 VFGS 417
G
Sbjct: 1929 GAGV 1932
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 49/173 (28%), Gaps = 10/173 (5%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
DV++G++ N + G+D G D + IY + + D
Sbjct: 1758 DVLLGDNDANTLNGAIGDDSILGKGSND--VLFGNQGKDVIYGYAGNDTI--------DA 1807
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
D + R L A + ++ +G D+ K + G+DI
Sbjct: 1808 GKDNDFGRGGQNDDWISGGLGEDTLCGDAGNDTVLGELGDDILLGNKGDDVVSGNAGQDI 1867
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
+ + N +G D +L A ++
Sbjct: 1868 VWGGEGNDSLHGGNGNDLVCGGIGNDTLLGDNGDDTLYGGDGDDSLTGGAGND 1920
>gi|190895181|ref|YP_001985474.1| hypothetical protein RHECIAT_PC0000854 [Rhizobium etli CIAT 652]
gi|190700842|gb|ACE94924.1| hypothetical protein RHECIAT_PC0000854 [Rhizobium etli CIAT 652]
Length = 349
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/255 (14%), Positives = 69/255 (27%), Gaps = 17/255 (6%)
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
++L S + + +++VG+ ND + G N++ +G+D DG
Sbjct: 2 ATVNLLPGQDSDFSDQAGPVNVYGTDGNDNIVGTDANDNLRGGIGNDILVGGAGDDFLDG 61
Query: 301 SSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G D + Y S + I + +VE L + +
Sbjct: 62 GEGNDRMYGGVGNDTYVVQSAQDVVVELAGEGIDHVKAYISYTLRPNVENLTLMGEDNLN 121
Query: 354 VNVK-QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSYDDL 411
+ + ++ L G D + G D + + L SY D
Sbjct: 122 GSGNELNNTIKGNIGNNTLFGGDGDDSLLGLAGNDIIRGGNGNDFMDGGTGVDLVSYKDA 181
Query: 412 RNVFGSDRGAAARHYITHG--------VKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
N D + T G + L A + +
Sbjct: 182 LNGVTVDLSINTKSQDTIGAGRDTLKNFENLEGSIFADKLSGDAGDNKIAGLDGNDVIRG 241
Query: 464 QVGKDHFSNFGCEEG 478
G D + +
Sbjct: 242 GAGNDDITGGAGADT 256
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 51/320 (15%), Positives = 93/320 (29%), Gaps = 18/320 (5%)
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
V ND+ + + + + D G + ++YG +GN+
Sbjct: 20 PVNVYGTDGNDNIVGTDANDNLRGGIGNDILVGGAGDDFLDGGEGNDRMYGG----VGND 75
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK--NMTIA 263
Y V Q + + G D + N +L ++ G N TI
Sbjct: 76 TY---VVQSAQDVVVELAGEGIDHVKAYISYTLRPNVENLTLMGEDNLNGSGNELNNTIK 132
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ ++ G G+D ++G + N++ +GND DG +G+D Y +
Sbjct: 133 GNIGNNTLFGGDGDDSLLGLAGNDIIRGGNGNDFMDGGTGVDLVSYKDALNGVTV-DLSI 191
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
D +D L + E L + + + + + G D
Sbjct: 192 NTKSQDTIGAGRDTLKNFENLEGSIFADKLSGDAGDNKIAGLDGNDVIRGGAGNDDITGG 251
Query: 384 KHFYEF-----GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
G + G D D + D L+ A EG
Sbjct: 252 AGADTIVFEAAGATNGVDRIRDFQS---TIDSLQFSKADYDVNALFTSSDKSEAEGAGAQ 308
Query: 439 AFKALEYIASHEDLINAFAD 458
+ A + D +
Sbjct: 309 FVFNTKTFALYYDADGEGGN 328
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/239 (12%), Positives = 69/239 (28%), Gaps = 12/239 (5%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ + D G+G T + +A + G + +
Sbjct: 52 GGAGDDFLDGGEGNDRMYGGVGNDTYVVQSAQDVVVELAGEGIDHVKAYISYTLRPNVEN 111
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
++ ++ + + G ++ + G GN
Sbjct: 112 LTLMGEDNLNGSGNELNNTIKGNIGNNTLFGGDGDDSLLGLAGNDIIRGGN----GNDFM 167
Query: 214 KDSPFIQTIY--DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ + D+ +DL++ ++ I + + + +
Sbjct: 168 DGGTGVDLVSYKDALNGVTVDLSINTKSQDTIGAG------RDTLKNFENLEGSIFADKL 221
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G +G++ + G N+V +GND G +G DT + A + R + D+
Sbjct: 222 SGDAGDNKIAGLDGNDVIRGGAGNDDITGGAGADTIVFEAAGATNGVDRIRDFQSTIDS 280
Score = 45.2 bits (105), Expect = 0.032, Method: Composition-based stats.
Identities = 49/318 (15%), Positives = 70/318 (22%), Gaps = 34/318 (10%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
D + V L + L+ G D + + G D
Sbjct: 26 TDGNDNIVGTDANDNLRGGIGNDILVGGAGDDFLDGGEGNDRMYGGVGNDTY--VVQSAQ 83
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS--HEDLINAFADAPDLVQ 464
G D A Y E L + + + +
Sbjct: 84 DVVVELAGEGIDHVKAYISYTLRPNVENLTLMGEDNLNGSGNELNNTIKGNIGNNTLFGG 143
Query: 465 VGKDHFSNFGCEE----GRFVTFDSYLY---LGSYDDLRNVFGSDRGAAARHYITHGVK- 516
G D + G F L SY D N D + T G
Sbjct: 144 DGDDSLLGLAGNDIIRGGNGNDFMDGGTGVDLVSYKDALNGVTVDLSINTKSQDTIGAGR 203
Query: 517 ------EGRNPDAF-KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
E F L A + + AG D G +I F
Sbjct: 204 DTLKNFENLEGSIFADKLSGDAGDNKIAGLDGNDVIRGGAGND--DITGGAGADTIVFEA 261
Query: 570 DLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLS 629
T+ D F S + + S + + A
Sbjct: 262 AG-ATNGVDRIRDFQSTIDSLQ--FSKADYDVNALFTSSD----------KSEAEGAGAQ 308
Query: 630 LSFDHKKVDLYTDYFGDG 647
F+ K LY D G+G
Sbjct: 309 FVFNTKTFALYYDADGEG 326
>gi|302671134|ref|YP_003831094.1| hypothetical protein bpr_I1776 [Butyrivibrio proteoclasticus B316]
gi|302395607|gb|ADL34512.1| hypothetical protein bpr_I1776 [Butyrivibrio proteoclasticus B316]
Length = 677
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 21/128 (16%)
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
D+ G+ A ARHY G++EGRN A D+ AF ++
Sbjct: 53 NPDVVKAVGNSYEALARHYDLFGMREGRN----------AYSGDVKAAF------IRLAN 96
Query: 552 DHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA--LGISG 609
+ G + F+ Y D VFG+D + +H+I +G+ EGR +
Sbjct: 97 SQYKL---GRGIASVFDAKWYAAHNPDAVKVFGNDPAKLFEHFIIYGLSEGRTPSETFNA 153
Query: 610 MQFKSVMN 617
F S
Sbjct: 154 DTFFSENK 161
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 24/149 (16%)
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
D+ G+ A ARHY G++EGRN A D+ AF +
Sbjct: 53 NPDVVKAVGNSYEALARHYDLFGMREGRN----------AYSGDVKAAFIRLANS----- 97
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKA 526
+ G FD+ Y D VFG+D H+I +G+ EGR P F A
Sbjct: 98 ----QYKLGRGIASVFDAKWYAAHNPDAVKVFGNDPAKLFEHFIIYGLSEGRTPSETFNA 153
Query: 527 LEYIASHED----LINAFADAPDLVQAGK 551
+ + +++ + AFAD P++V +
Sbjct: 154 DTFFSENKEMAVLVAAAFADKPEVVNSPI 182
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 53/157 (33%), Gaps = 26/157 (16%)
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-------------------------FDSY 402
D+++ +G +H+ FG+ EGR+ FD+
Sbjct: 53 NPDVVKAVGNSYEALARHYDLFGMREGRNAYSGDVKAAFIRLANSQYKLGRGIASVFDAK 112
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPD 461
Y D VFG+D H+I +G+ EGR P F A + + ++++ A A
Sbjct: 113 WYAAHNPDAVKVFGNDPAKLFEHFIIYGLSEGRTPSETFNADTFFSENKEMAVLVAAAFA 172
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ E + + +++
Sbjct: 173 DKPEVVNSPILQVAREVSTTYIPAPVSAPENNNVSET 209
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 46/142 (32%), Gaps = 29/142 (20%)
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRN------------------------PDAFKA 442
D+ G+ A ARHY G++EGRN F A
Sbjct: 52 QNPDVVKAVGNSYEALARHYDLFGMREGRNAYSGDVKAAFIRLANSQYKLGRGIASVFDA 111
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFG 500
Y A + D + F + +HF +G EGR + F++ + ++ +
Sbjct: 112 KWYAAHNPDAVKVFGND---PAKLFEHFIIYGLSEGRTPSETFNADTFFSENKEMAVLVA 168
Query: 501 SDRGAAARHYITHGVKEGRNPD 522
+ + ++ R
Sbjct: 169 AAFADKPEVVNSPILQVAREVS 190
Score = 45.5 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 47/151 (31%), Gaps = 7/151 (4%)
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D SY ++ + N + D + RL + + Y
Sbjct: 55 DVVKAVGNSYEALARHYDLFGMREGRNAYSGDVKAAFIRLANSQYKLGRGIASVFDAKWY 114
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDD----LRNVFGSD 418
A D ++V G D + +HF +GLSEGR TF++ + + + F
Sbjct: 115 AAHNPDAVKVFGNDPAKLFEHFIIYGLSEGRTPSETFNADTFFSENKEMAVLVAAAFADK 174
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+ +E + ++
Sbjct: 175 PEVVNSPILQVA-REVSTTYIPAPVSAPENN 204
>gi|86747930|ref|YP_484426.1| hemolysin-type calcium-binding region [Rhodopseudomonas palustris
HaA2]
gi|86570958|gb|ABD05515.1| Hemolysin-type calcium-binding region [Rhodopseudomonas palustris
HaA2]
Length = 2885
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/229 (16%), Positives = 66/229 (28%), Gaps = 24/229 (10%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE-------------KNMTIAQHTV 267
TI G D+LDL+ G ++L + S G N I
Sbjct: 2639 TIVGGEGFDVLDLSDATGAV-TLNLAAGTVSGAGIGTDHFSSIESFVFGAGNDVITGGNG 2697
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+S+ G +GND + G + N+ GND DG SG D + ++
Sbjct: 2698 DDSLDGGAGNDTIAGGNGNDTLSGGDGNDAIDGGSGNDIV--DGGLGNDTLKGGSGNDVI 2755
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + L+ + + + G D+
Sbjct: 2756 AAGDGDDT--------VDAGSGDDIVTGGLGNDTLKGGSGADIITGGAGNDILTGGSGAD 2807
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
F + G + F +D A ++H + G +
Sbjct: 2808 VFVFAAGFGKDTVTDFVTTGSSADLLQFSTDMFADFADVMSHTAQVGSS 2856
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/339 (13%), Positives = 86/339 (25%), Gaps = 13/339 (3%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G+ N + + N + +GY AT + +D +++ G
Sbjct: 2481 GAENFSEGIAAGGGEIRNHVGASIYSVDHAILVDNGSGGWGYLATVIQND-GSIEGRDGF 2539
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+G+ + T D GG + + L G
Sbjct: 2540 GIKLVGDFDDTLTSTGTIIGGNGTAIDMGGGNDIVALSGASAVTGKILLGAGDDVFTGAA 2599
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ T+ + + G +G+DV+ G +++ G+D G G D +
Sbjct: 2600 QAETVDGGAGADMISGGAGDDVLDGGDGDDLLRGGDGDDTIVGGEGFDVLDLSDATGAVT 2659
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ D S +E F L+ A + + G
Sbjct: 2660 LNLAAGT---VSGAGIGTDHFSSIESFVFGAGNDVITGGNGDDSLDGGAGNDTIAGGNGN 2716
Query: 378 DVFESMKHFYEFGLSEGRDI-----TFDSYLYLGSYDDLRNVFGSDRGAAARH----YIT 428
D G DI D+ D + G D A
Sbjct: 2717 DTLSGGDGNDAIDGGSGNDIVDGGLGNDTLKGGSGNDVIAAGDGDDTVDAGSGDDIVTGG 2776
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
G + + A ++ L + G
Sbjct: 2777 LGNDTLKGGSGADIITGGAGNDILTGGSGADVFVFAAGF 2815
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/313 (14%), Positives = 86/313 (27%), Gaps = 10/313 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+DI +S + + + +A+ G G I + G
Sbjct: 2569 GGNDIVALSGASAVTGKILLGAGDDVFTGAAQAETVDGGAGADMISGGAGDDVLDGGDGD 2628
Query: 135 MHPGSYNGGYPVYGVDNDYEND----SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+G + G + D + ++ + + +
Sbjct: 2629 DLLRGGDGDDTIVGGEGFDVLDLSDATGAVTLNLAAGTVSGAGIGTDHFSSIESFVFGAG 2688
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDL 245
I G + T+ G+D +D + GG+ N
Sbjct: 2689 NDVITGGNGDDSLDGGAG-NDTIAGGNGNDTLSGGDGNDAIDGGSGNDIVDGGLGNDTLK 2747
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
I + + T+ + + V G GND + G S ++ +GND+ G SG D
Sbjct: 2748 GGSGNDVIAAGDGDDTVDAGSGDDIVTGGLGNDTLKGGSGADIITGGAGNDILTGGSGAD 2807
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
F + A + F D + D +D + + S V
Sbjct: 2808 VFVFAAGFGKDTVTDFVTTGSSADLLQFSTDMFADFADVMSHTAQVGSSVVVTLDADTSI 2867
Query: 366 ASYEDLIQVIGQD 378
+ + D
Sbjct: 2868 TLANVQMTSLAAD 2880
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/379 (12%), Positives = 99/379 (26%), Gaps = 49/379 (12%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + + + + G T +A+ LG
Sbjct: 835 GGEAINLVGDWADSVSNSATGVIIGGVKLGGGADTLVNDGNMTATGGSAVD-----LGDG 889
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
N G V ND + + M D + + ++
Sbjct: 890 DDLFVNRGTVTGDVLAGAGNDEIINVSTGRILGDLVMGDGNDKLGNSGLIV--------- 940
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + G+++ + V TI G+DLL + +++ + ++
Sbjct: 941 GDIEMGDGDDVVNLYVGTSVGG---TIVLGSGNDLLTAS---ANGDFVVDAGDGDDTVAF 994
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------- 307
+ + + + + G +D V G ++ ++G+D G +G DT
Sbjct: 995 GDGDDQVKGGAGNDMLYGGGDDDFVSGGEGDDYLQGNAGDDELLGGAGNDTLLGGAGDDT 1054
Query: 308 --FYYAPSYLYKIYRFENAIIVYDAN-----EHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ + A + D L +E +
Sbjct: 1055 IDGGDGIDTADYAFDIAGVTVDLSAGEASGDDAGYDTLVAIE---------NVTGGAGDD 1105
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
L + L G DV +G D+ G+ D + G DR
Sbjct: 1106 TLIGDGNANVLSGGAGDDVLSGGGGADTLIGGDGDDVLL-----AGALDAVLAGAGDDRI 1160
Query: 421 AAARHYITHGVKEGRNPDA 439
+G + D
Sbjct: 1161 EVTTDGGAPATIDGGDGDD 1179
>gi|296446630|ref|ZP_06888571.1| glycosyl transferase group 1 [Methylosinus trichosporium OB3b]
gi|296255858|gb|EFH02944.1| glycosyl transferase group 1 [Methylosinus trichosporium OB3b]
Length = 1371
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 56/155 (36%), Gaps = 25/155 (16%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAF 456
FD+ YL +Y D++N H++ HG +EGRNP +F L Y +
Sbjct: 18 YFDAQYYLNAYPDVKNA----GMDPFIHFVNHGWREGRNPSSSFHTLFYKDRNLG-GRLS 72
Query: 457 ADAPDLVQVGKDHFSNFGCEEGR-----------FVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ KD E FD Y Y +
Sbjct: 73 ENPLTHYSQHKDDGELRKFPESEQELVEVQRRVIEPEFDPSYYSKRYSVPIDT------- 125
Query: 506 AARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 539
A HY+T G ++G P+ AF EY+ +H + A
Sbjct: 126 ALEHYLTVGWRKGFEPNRAFSTSEYLRAHPHIAAA 160
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/248 (16%), Positives = 68/248 (27%), Gaps = 67/248 (27%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSY 492
F A Y+ ++ D+ NA D HF N G EGR +F + Y
Sbjct: 14 EEKSYFDAQYYLNAYPDVKNAGMDP-------FIHFVNHGWREGRNPSSSFHTLFYKDRN 66
Query: 493 DDLRNVFGSDRGAAARHYITHG----------------VKEGRNPDA-FKALEYIASHED 535
G HY H + R + F Y +
Sbjct: 67 L-----GGRLSENPLTHYSQHKDDGELRKFPESEQELVEVQRRVIEPEFDPSYYSKRYS- 120
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNVFGSDRSAAAQH 593
+ +H+ G+ +G F+ YL ++ + S H
Sbjct: 121 ---------VPIDTALEHYLTVGWRKGFEPNRAFSTSEYLRAHPHIAAANVS----PFYH 167
Query: 594 YITHGMKEG---------RALGISGMQFKSVMN----LSEKSRDKADLSLSFDHKKV--- 637
++T +G R S ++ L + A + D K
Sbjct: 168 FVTT-RDKGAASAEAAESRTAPSSTQLGRAYEGRLEELVVGNELSAVTGWALDRKTGTFP 226
Query: 638 ---DLYTD 642
D+Y D
Sbjct: 227 SRFDIYYD 234
>gi|186684962|ref|YP_001868158.1| outer membrane adhesin like proteiin [Nostoc punctiforme PCC 73102]
gi|186467414|gb|ACC83215.1| putative outer membrane adhesin like proteiin [Nostoc punctiforme PCC
73102]
Length = 1434
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/326 (17%), Positives = 103/326 (31%), Gaps = 17/326 (5%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEV---ARWALGEWSKVVDLTFE 71
D L+ ++ F + + IT + V A L +S V T
Sbjct: 1076 DDLIIGAPNNSRFATGAGESYVIFGFATKITTVTEEDTAVNILASTILNRYSDVDGDTLS 1135
Query: 72 ET--SIHSDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADVWRYGIGKGTILSHNALHEI 128
T + ++ ++NG V P D + N++ D + Y I S +
Sbjct: 1136 ITGFTNPANGTLAFNDNGTVGNPNDDYFVYTPNANYNDTDSFTYTINDSNGGSITGTFNL 1195
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
+ ++ V N + T + + + + + AT
Sbjct: 1196 --TINPVNDAPITVNDTVTDAKNTAVSIEAKTLLANDRDIDSTNLSITGVSAATHGT--- 1250
Query: 189 VAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
AV K G P S + I + F TI D +T+ G + +
Sbjct: 1251 -AVLKNNGTPSNSADDFIVFTPTCGFSGAASFNYTITDGQLTSTAKVTIQVGDRFF---G 1306
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G N + + + G +G D + G + N++ G+D+ G +G D
Sbjct: 1307 DNGNDVLHGTPGNDYLNGGNGKDILYGGNGKDTLSGGNGNDLLSGGLGSDILTGGNGDDK 1366
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANE 332
F + A I F + +
Sbjct: 1367 FVFAAGEGNGIITDFCKGNDLIGLSN 1392
>gi|158338739|ref|YP_001519916.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158308980|gb|ABW30597.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
Length = 1401
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 70/487 (14%), Positives = 131/487 (26%), Gaps = 29/487 (5%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
++G ++ + + + G H I G H +G
Sbjct: 113 GDSGNDYIRATGAKNKLYGGWGNDKIETTAWGNKVYAEWGDDHVIAKG-GWNHIDGGSGR 171
Query: 144 Y--PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
VYG+ N S + +Y + T V + V + +
Sbjct: 172 DWLQVYGIKNHINGGSGADWLRAYGAENTVYGGSGDDSIKTFAVKNTVYGGWGNDKIETT 231
Query: 202 L-GNNIY--KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GN +Y I G D L + I KN I + I Y
Sbjct: 232 AWGNKVYAEWGNDHVIAKGGWNHIDGGSGRDWLQVYGI---KNTIQGGSGG-DWIEAYGA 287
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
TI + +++ + ++ V G ++ G + DG SG D Y +
Sbjct: 288 QNTIYGGSGDDNIKTFAASNTVYGEQGDDHVIAKGGWNHIDGGSGRDWLQVYGIKNTIQG 347
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ I Y A D FA + A + G D
Sbjct: 348 GSDSDWIEAYGAQNTIYGGSGDDNIKTFA-ASNTVYAGDGHDTITTAAVSNTIHAGSGND 406
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
++ + G + + Y L +G+D A Y +
Sbjct: 407 KVIALGGKNTVHGNGGNNTLIAAGGYNR----LTAGWGNDTLIAVGGY------NNMDTG 456
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ +NA + G + N G + + S +
Sbjct: 457 HGNNTSVGVGGFNTMNAGHGNDFMFGFGGANKINAGHGRNTVIGLGGANVINSGSGNDTI 516
Query: 499 FG-------SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
G + G+ + + + + +A+ L +A + ++ G
Sbjct: 517 IGVGGANVVNAGDGNNTVIGFGGLNKLHSGNGNDIMVGVAAGNWLTSAGGND-LIIGLGA 575
Query: 552 DHFSNFG 558
++ N G
Sbjct: 576 ANYLNGG 582
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/245 (16%), Positives = 72/245 (29%), Gaps = 20/245 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + ++ G+DL+ GG + I L + + G + N I
Sbjct: 1051 GDDIIVGGGKMNRLFGGAGNDLILGAGKTNIFKGGKGDDIILGAGKKNVLKGGDGNDIIL 1110
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS---------GLDTFFYYAPSY 314
S G GND++IG N +G+D+ G G D F
Sbjct: 1111 GGGQTNSFTGGKGNDILIGGGKKNTLKGGAGDDILIGGGKENKLIGGKGND-FILAIGQK 1169
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ II+ E+K S + + +++ + + +
Sbjct: 1170 NTFDGGKGDDIIIGLGQENKIKSGSGNDIVLVKGAKNSFMSLGGLNRIYGAGKNNTIQGG 1229
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
+D + + G D +G+ L G+D G G
Sbjct: 1230 QDKDTIHAGGESNTYDAGAGDDTLIS----IGNNITLTGGAGNDTYQ-IGSKDAFGASLG 1284
Query: 435 RNPDA 439
NP
Sbjct: 1285 ANPGG 1289
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/316 (14%), Positives = 88/316 (27%), Gaps = 12/316 (3%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
G S + + + G I ++ A + I G + ++ V
Sbjct: 322 GGWNHIDGGSGRDWLQVYGIKNTIQGGSDSDWIEAYGAQNTIYGGSGDDNIKTFAASNTV 381
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN- 205
Y D + S + + + A G + G + + G
Sbjct: 382 YAGDGHDTITTAAVSNTIHAGSGNDKVIALGGKNTVHGNGGNNTLIAAGGYNRLTAGWGN 441
Query: 206 ----IYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGG 255
T GG + + D G N I+ + IG
Sbjct: 442 DTLIAVGGYNNMDTGHGNNTSVGVGGFNTMNAGHGNDFMFGFGGANKINAGHGRNTVIGL 501
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N+ I + ++++G G +VV NN G + +G D A
Sbjct: 502 GGANV-INSGSGNDTIIGVGGANVVNAGDGNNTVIGFGGLNKLHSGNGNDIMVGVAAGNW 560
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ II A + + + A + Q ++ A+ +
Sbjct: 561 LTSAGGNDLIIGLGAANYLNGGAGNDILISAAAANVQVGGEGQDVMVALGAANAMAGDTV 620
Query: 376 GQDVFESMKHFYEFGL 391
G+D ++M + G
Sbjct: 621 GKDTLKNMAKDLDLGS 636
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 58/401 (14%), Positives = 102/401 (25%), Gaps = 48/401 (11%)
Query: 193 KIYGAPKGSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+YG GN+ Y + + GG + L GG +
Sbjct: 38 YLYG----HGGNDTLKAYGWKNTVDGGSGNDHVEAWGGRNTL----RGGSGHDRIYGYGG 89
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS------- 302
+ G N I +V G SGND + A N + GND + ++
Sbjct: 90 SNYARGGSGNDQIRVFGWSNTVYGDSGNDYIRATGAKNKLYGGWGNDKIETTAWGNKVYA 149
Query: 303 --GLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G D S + + + + E + DS
Sbjct: 150 EWGDDHVIAKGGWNHIDGGSGRDWLQVYGIKNHINGGSGADWLRAYGAENTVYGGSGDDS 209
Query: 354 V----------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ +E TA + G D + + GRD
Sbjct: 210 IKTFAVKNTVYGGWGNDKIETTAWGNKVYAEWGNDHVIAKGGWNHIDGGSGRDWLQ---- 265
Query: 404 YLGSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
G + ++ G D A Y G + A + + +I
Sbjct: 266 VYGIKNTIQGGSGGDWIEAYGAQNTIYGGSGDDNIKTFAASNTVYGEQGDDHVIAKGGWN 325
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
G+D +G + DS + +Y ++G + +
Sbjct: 326 HIDGGSGRDWLQVYGIKNTIQGGSDSDW-IEAYGAQNTIYGGSGDDNIKTFAASNTV--Y 382
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
D + A + + + GK+ G
Sbjct: 383 AGDGHDTITTAAVSNTIHAGSGNDKVIALGGKNTVHGNGGN 423
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/268 (13%), Positives = 67/268 (25%), Gaps = 18/268 (6%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
GG + I + + + G N A + G GND+++ + N GN
Sbjct: 903 SGGRGDDIQVAGGKVNVVDGGLGNDIQASIGKFNLLKGGQGNDLMLAGGSLNKMMGQDGN 962
Query: 296 DVFD---------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
D+ G +G D + + + ++V + + +
Sbjct: 963 DIMIGGGKLNTMMGGAGNDIMV-GGGKFNKMLAGTGDDLVVGGGKINSLSAGKGNDIMVG 1021
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY---- 402
+ + + IL + G D+ G D+ +
Sbjct: 1022 GGKFNTMLGGEGNDILLGGGKTNTMQGGAGDDIIVGGGKMNRLFGGAGNDLILGAGKTNI 1081
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
G DD+ G G + ++ LI
Sbjct: 1082 FKGGKGDDIILGAGKKNVLK----GGDGNDIILGGGQTNSFTGGKGNDILIGGGKKNTLK 1137
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
G D G E + L
Sbjct: 1138 GGAGDDILIGGGKENKLIGGKGNDFILA 1165
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 48/146 (32%), Gaps = 10/146 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ + G+ N T+ + +V G SGND V N SG+D G G +
Sbjct: 37 NYLYGHGGNDTLKAYGWKNTVDGGSGNDHVEAWGGRNTLRGGSGHDRIYGYGGSNYARGG 96
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + +++ + N + D+ +R +E TA
Sbjct: 97 SGNDQIRVFGWSN----TVYGDSGNDY------IRATGAKNKLYGGWGNDKIETTAWGNK 146
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRD 396
+ G D + + GRD
Sbjct: 147 VYAEWGDDHVIAKGGWNHIDGGSGRD 172
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 35/256 (13%), Positives = 64/256 (25%), Gaps = 12/256 (4%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG + I ++ +++ G + A + + G G+D+ + NV GND
Sbjct: 868 GGQGSDIQVSLGKANALWGGDGADVQAALGAVNILSGGRGDDIQVAGGKVNVVDGGLGND 927
Query: 297 V---------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ G G D A L K+ + I+ + +
Sbjct: 928 IQASIGKFNLLKGGQGNDLML--AGGSLNKMMGQDGNDIMIGGGKLNTMMGGAGNDIMVG 985
Query: 348 DQCID-SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ + ++ L G D+ F EG DI
Sbjct: 986 GGKFNKMLAGTGDDLVVGGGKINSLSAGKGNDIMVGGGKFNTMLGGEGNDILLGGGKTNT 1045
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ G R + G + + ++ A G
Sbjct: 1046 MQGGAGDDIIVGGGKMNRLFGGAGNDLILGAGKTNIFKGGKGDDIILGAGKKNVLKGGDG 1105
Query: 467 KDHFSNFGCEEGRFVT 482
D G
Sbjct: 1106 NDIILGGGQTNSFTGG 1121
Score = 41.7 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 45/314 (14%), Positives = 83/314 (26%), Gaps = 21/314 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ I G T + + + + K + G G IL + G
Sbjct: 1030 GGEGNDILLGGGKTNTMQGGAGDDIIVGGGKMNRLFGGAGNDLILGAGKTNIFKGGKG-D 1088
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G V + + S+ + + + G T +
Sbjct: 1089 DIILGAGKKNVLKGGDGNDIILGGGQTNSFTGGKGNDILIGGGKKNTLKGGAGDDILIGG 1148
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESW 250
G +G K T GDD++ G N I L +
Sbjct: 1149 GKENKLIGG---KGNDFILAIGQKNTFDGGKGDDIIIGLGQENKIKSGSGNDIVLVKGAK 1205
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGS 301
+S I ++ G D + +N + +G+D G
Sbjct: 1206 NSFMSLGGLNRIYGAGKNNTIQGGQDKDTIHAGGESNTYDAGAGDDTLISIGNNITLTGG 1265
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD---QCIDSVNVKQ 358
+G DT+ + I +++ D + + L A+ + ID
Sbjct: 1266 AGNDTYQIGSKDAFGASLGANPGGIRTTTIDNQGDASTTDKLLLGANIDYRNIDFSRSGN 1325
Query: 359 RSILEYTASYEDLI 372
L + E +I
Sbjct: 1326 DVQLNVLDTNEVVI 1339
Score = 40.5 bits (93), Expect = 0.93, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 55/233 (23%), Gaps = 13/233 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSS 302
G ++ +A ++G G+D+ + N + G DV G
Sbjct: 848 YSHGANSDIMVAAGKANF-LLGGQGSDIQVSLGKANALWGGDGADVQAALGAVNILSGGR 906
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID-SVNVKQRSI 361
G D A + + I + L A ++ + I
Sbjct: 907 GDDIQV--AGGKVNVVDGGLGNDIQASIGKFNLLKGGQGNDLMLAGGSLNKMMGQDGNDI 964
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ ++ G D+ F + G D+ N G
Sbjct: 965 MIGGGKLNTMMGGAGNDIMVGGGKFNKMLAGTGDDLVVGGGKINSLSAGKGNDIMVGGGK 1024
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
G ++ A + ++ G D G
Sbjct: 1025 FNTMLGGEGNDILLGGGKTNTMQGGAGDDIIVGGGKMNRLFGGAGNDLILGAG 1077
>gi|301608600|ref|XP_002933877.1| PREDICTED: matrix metalloproteinase-28-like [Xenopus (Silurana)
tropicalis]
Length = 497
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/191 (23%), Positives = 64/191 (33%), Gaps = 49/191 (25%)
Query: 30 YKPDVLTTHRLSFDITEL----NPNA-QEVARWALGEWSKVVDLTFEET-SIHSDIKFIS 83
K L++ I + + ++ + A WS V LTF E +DI+
Sbjct: 110 SKSKKWYKQHLTYQIVNWPWYLSQHQVRQAVKAAFQLWSNVSSLTFSEALRDPADIRLAF 169
Query: 84 ----SNNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
N+G E +FD A+ W GKG L HEIGH
Sbjct: 170 FHGDHNDGAGNAFDGPGGALAHAFFPRRGEAHFDSAEHWSLN-GKGQNLFVVLAHEIGHT 228
Query: 132 LGLMH-PGSYNGGYPVY-GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
LGL H P P Y ++ DY + D++
Sbjct: 229 LGLQHSPFKNALMSPYYKKLNKDYVLN----------------------------FDDVL 260
Query: 190 AVQKIYGAPKG 200
A+Q +YGAP
Sbjct: 261 AIQNLYGAPPS 271
>gi|291415637|ref|XP_002724058.1| PREDICTED: matrix metalloproteinase 11 [Oryctolagus cuniculus]
Length = 492
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 66/205 (32%), Gaps = 52/205 (25%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIH 76
L W + Y+ + + + AL WS+V LTF E H
Sbjct: 104 LSGGRWEKTDLTYRILRFPWQLVREQV-------RRTVAEALQVWSEVTPLTFTEVHEGH 156
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G +GT L
Sbjct: 157 ADIVIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGDNQGTDLL 214
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H + ++MS +F Y
Sbjct: 215 QVAAHEFGHVLGLQHT-------------------TAAKALMS--------PFYTFRYPL 247
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNI 206
+ D +Q +YG P+ + +
Sbjct: 248 SLSQDDRRGIQYLYGQPRSASTSET 272
>gi|257095236|ref|YP_003168877.1| Hemolysin-type calcium-binding domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047760|gb|ACV36948.1| Hemolysin-type calcium binding domain protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 3662
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 72/515 (13%), Positives = 143/515 (27%), Gaps = 46/515 (8%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E+ D + + D G+G ++ +
Sbjct: 2411 EDVLGSRDFNDSLTGSAADNKLEGQGGNDTLDGGLGNDSLLGGLGNDSLFGAAGADTLAA 2470
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYEND-SFLTSVMSYFMPQDSMMDASFGYCATPMVSD-- 187
GL + + N + + + + + + D +F + + D
Sbjct: 2471 GPGLDTVDGGADADTLVVLGNFADYTRTRPNATDTRLVFAGTGEDITFRNVESVVFLDGT 2530
Query: 188 -IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------------DLT 234
+A + + T+ GDD D
Sbjct: 2531 RTLADVHLNIVSANNDVIVGTPGNDTLDGLAGADTLVGLDGDDTYVVDVAGDVVTEGDGA 2590
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
G + + ++ + TIA T +V G++ ++V++GN+ N+ G
Sbjct: 2591 GSGSDRVNVVFTAGGTYTLAANVEKATIANGTAGVNVTGNALDNVLLGNATANLLTGLGG 2650
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIY-----------RFENAIIVYDANEHKQDFLSDVER 343
ND DG++G+DT + Y + + + V A+ ++VE
Sbjct: 2651 NDTLDGNAGIDTLVGGLGNDSYTVDVPADVITELLGEGTDQVNVLFASAGTYILAANVEN 2710
Query: 344 LRFADQC--IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ + ++ + L + L + G D + M G D
Sbjct: 2711 AQIGNSTPGVNLTGNGLGNNLVGNSQANLLAGLDGDDTLDGMAGNDTLDGGLGNDSLLGG 2770
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
D L G+D AA G+ L +A+ D + D
Sbjct: 2771 LG----NDSLFGAAGADTLAAGP-----GLDTVDGGADADTLVVLANFADYSITRVNETD 2821
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY--DDLRNVFGSDRGAAARHYITHGVKEGR 519
V + F+ F S +++ + +D A G
Sbjct: 2822 TRLVNAGTGEDIVLRSIEFIAFADGGKTRSQYWNNVIDNLSNDWTGTA------GNDNIN 2875
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
L +A + LI + + G D +
Sbjct: 2876 GLVGNDTLAGLAGDDTLIGGPGNDVLIGGPGDDIY 2910
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 47/322 (14%), Positives = 90/322 (27%), Gaps = 9/322 (2%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
+ D G G + + LG G G S
Sbjct: 1238 GLEGNDTIDGGRGYDRAEYTLSTAGVNVTLG-----GAGSGTASDGYGTTDTLISIEGVR 1292
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI 222
S F + +A+ + + + + G + + + V
Sbjct: 1293 GSAFNDTLTGSNAADIFESFEGREGNDNINGMGGTDRVVYTASKAGVTVNLATGTASDGY 1352
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ + ++ L N + + + + G N T+ +S++G GND + G
Sbjct: 1353 GGTDSLNNIEDVLGSRDFNDSLTGSAADNKLEGQGGNDTLDGGLGNDSLLGGLGNDSLFG 1412
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDV 341
+ + G D DG + DT Y R +D +V
Sbjct: 1413 AAGADTLAAGPGLDTVDGGADADTLVVLGNFADYTRTRPNATDTRLVFAGTGEDITFRNV 1472
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E + F D +V + +A+ + ++ G D + + +G D
Sbjct: 1473 ESVVFLDGTRTLADVHLNIV---SANNDVIVGTPGNDTLDGLAGADTLVGLDGDDTYVVD 1529
Query: 402 YLYLGSYDDLRNVFGSDRGAAA 423
+ GSDR
Sbjct: 1530 VAGDVVTEGDGAGSGSDRVNVV 1551
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 47/322 (14%), Positives = 90/322 (27%), Gaps = 9/322 (2%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
+ D G G + + LG G G S
Sbjct: 2287 GLEGNDTIDGGRGYDRAEYTLSTAGVNVTLG-----GAGSGTASDGYGTTDTLISIEGVR 2341
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTI 222
S F + +A+ + + + + G + + + V
Sbjct: 2342 GSAFNDTLTGSNAADIFESFEGREGNDNINGMGGTDRVVYTASKAGVTVNLATGTASDGY 2401
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ + ++ L N + + + + G N T+ +S++G GND + G
Sbjct: 2402 GGTDSLNNIEDVLGSRDFNDSLTGSAADNKLEGQGGNDTLDGGLGNDSLLGGLGNDSLFG 2461
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDV 341
+ + G D DG + DT Y R +D +V
Sbjct: 2462 AAGADTLAAGPGLDTVDGGADADTLVVLGNFADYTRTRPNATDTRLVFAGTGEDITFRNV 2521
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E + F D +V + +A+ + ++ G D + + +G D
Sbjct: 2522 ESVVFLDGTRTLADVHLNIV---SANNDVIVGTPGNDTLDGLAGADTLVGLDGDDTYVVD 2578
Query: 402 YLYLGSYDDLRNVFGSDRGAAA 423
+ GSDR
Sbjct: 2579 VAGDVVTEGDGAGSGSDRVNVV 2600
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/344 (16%), Positives = 93/344 (27%), Gaps = 31/344 (9%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + + ++ G N T+ +S++G GND + G + + +G D
Sbjct: 635 GNSQANLLAGLDGDDTLDGMAGNDTLDGGLGNDSLLGGLGNDNLFGAAGADTLAAGTGLD 694
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCIDSVN 355
DG + DT Y R +D +VE + F D +
Sbjct: 695 TVDGGADADTLVVLGNFADYTRTRPNATDTRLVNAGTGEDVTFRNVESVVFLDGTRTLAD 754
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
V + +A+ + L+ G D + + +G D F +
Sbjct: 755 VHLNIV---SANNDSLVGTPGNDTLDGLAGTDTLVGLDGDDTYFVDVAGDVVTEGDGAGS 811
Query: 416 GSDRGA----AARHYITHGVKEG---RNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
GSDR A Y E N A + A L+ G D
Sbjct: 812 GSDRVNVVFTAGGTYTLAANVENATIANGTAGVNVTGNALDNVLLGNATANLLTGLGGND 871
Query: 469 HFSNFGCEEGRFVTFDSYLY--------LGSYDDLRNVFGSDRGAAARHYITHGVKE--- 517
+ + Y + N + AA Y E
Sbjct: 872 TLDGGLGIDTLVGGLGNDFYAIDTLADVVTENPGEGNDGVAVLLAAGATYTLAANVENAG 931
Query: 518 ------GRNPDAFKALEYIASH---EDLINAFADAPDLVQAGKD 552
G N + + L + + AG D
Sbjct: 932 IGNATPGVNLTGNALDNTLQGNSQANVLNGSTGNDALYGNAGND 975
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/344 (15%), Positives = 92/344 (26%), Gaps = 31/344 (9%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + + ++ G N T+ +S++G GND + G + + G D
Sbjct: 1684 GNGQANLLAGLDGDDTLDGTAGNDTLDGGLGNDSLLGGLGNDSLFGAAGADTLAAGPGLD 1743
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCIDSVN 355
DG + DT Y R +D +VE + F D +
Sbjct: 1744 TVDGGADADTLVVLGNFADYTRTRPNATDTRLVFAGTGEDVTFRNVESVVFLDGTRTLAD 1803
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
V + +A+ + ++ G D + + +G D F +
Sbjct: 1804 VHLNIV---SANNDVIVGTPGNDTLDGLAGADTLVGLDGDDTYFVDVAGDVVTEGDGAGS 1860
Query: 416 GSDRGA----AARHYITHGVKEG---RNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
GSDR A Y E N A + A L+ G D
Sbjct: 1861 GSDRVNVVFTAGGTYTLAANVENATIANGTAGVNVTGNALDNVLLGNATANLLTGLGGND 1920
Query: 469 HFSNFGCEEGRFVTFDSYLY--------LGSYDDLRNVFGSDRGAAARHYITHGVKE--- 517
+ + Y + N + AA Y E
Sbjct: 1921 TLDGGLGIDTLVGGLGNDFYAIDTLADVVTENPGEGNDGVAVLLAAGATYTLAANVENAG 1980
Query: 518 ------GRNPDAFKALEYIASH---EDLINAFADAPDLVQAGKD 552
G N + + L + + AG D
Sbjct: 1981 IGNATPGVNLTGNALDNTLQGNSQANVLNGSTGNDALYGNAGND 2024
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 58/186 (31%), Gaps = 7/186 (3%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + + ++ G N T+ +S++G GND + G + + G D
Sbjct: 2733 GNSQANLLAGLDGDDTLDGMAGNDTLDGGLGNDSLLGGLGNDSLFGAAGADTLAAGPGLD 2792
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCIDSVN 355
DG + DT A Y I R +D L +E + FAD
Sbjct: 2793 TVDGGADADTLVVLANFADYSITRVNETDTRLVNAGTGEDIVLRSIEFIAFADGGKTRSQ 2852
Query: 356 V------KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ TA +++ ++G D + G D+
Sbjct: 2853 YWNNVIDNLSNDWTGTAGNDNINGLVGNDTLAGLAGDDTLIGGPGNDVLIGGPGDDIYDV 2912
Query: 410 DLRNVF 415
D+
Sbjct: 2913 DIAADV 2918
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 62/513 (12%), Positives = 132/513 (25%), Gaps = 60/513 (11%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E+ D + + D G+G ++ +
Sbjct: 1362 EDVLGSRDFNDSLTGSAADNKLEGQGGNDTLDGGLGNDSLLGGLGNDSLFGAAGADTLAA 1421
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYEND-SFLTSVMSYFMPQDSMMDASFGYCATPMVSD-- 187
GL + + N + + + + + + D +F + + D
Sbjct: 1422 GPGLDTVDGGADADTLVVLGNFADYTRTRPNATDTRLVFAGTGEDITFRNVESVVFLDGT 1481
Query: 188 -IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------------DLT 234
+A + + T+ GDD D
Sbjct: 1482 RTLADVHLNIVSANNDVIVGTPGNDTLDGLAGADTLVGLDGDDTYVVDVAGDVVTEGDGA 1541
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
G + + ++ + TIA T +V G++ ++V++GN+ N+ G
Sbjct: 1542 GSGSDRVNVVFTAGGTYTLAANVEKATIANGTAGVNVTGNALDNVLLGNATANLLTGLGG 1601
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIY-----------RFENAIIVYDANEHKQDFLSDVER 343
ND DG++G+DT + Y + + + V A+ ++VE
Sbjct: 1602 NDTLDGNAGIDTLVGGLGNDSYTVDVPADVITELLGEGTDQVNVLFASAGTYILAANVEN 1661
Query: 344 LRFADQC--IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ + ++ + L L + G D + G D
Sbjct: 1662 AQIGNPTPGVNLTGNGLGNNLAGNGQANLLAGLDGDDTLDGTAGNDTLDGGLGNDSLLGG 1721
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
D L G+D +A+ L A
Sbjct: 1722 LG----NDSLFGAAGADT--------------------------LAAGPGLDTVDGGADA 1751
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
V +F+++ ++ G+ +D+ V
Sbjct: 1752 DTLVVLGNFADYTRTRPNATDT-RLVFAGTGEDVTFRNVESVVFLDGTRTLADVHLNIVS 1810
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ ++ L + G D +
Sbjct: 1811 ANNDVIVGTPGNDTLDGLAGADTLVGLDGDDTY 1843
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 53/337 (15%), Positives = 97/337 (28%), Gaps = 31/337 (9%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ GN+ + + + G + + ++ T S +
Sbjct: 355 DGADGNDTIVGGAFADTAAYDNDSDGTDGGIYGAIVNLSASSITVNGVTGYGSGVTVGSL 414
Query: 259 NMTIAQH-----TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ IE++ GS+ +D V+G+S N + GND DG +G D+
Sbjct: 415 MARDSFGDTDSLNSIENIFGSARSDFVLGSSGANWLAGNEGNDTLDGGAGNDSLLGGDGD 474
Query: 314 YLYKIYRFENAIIVYDANEHKQD-------------FLSDVERLRFADQC--IDSVNVKQ 358
Y + + + D D ++VE+ A+ ++
Sbjct: 475 DTYVVDVAGDVVTEGDGAGSGSDRVNVVFTAGGTYTLAANVEKATIANGTAGVNVTGNAL 534
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
++L A+ L + G D + G D + G+D
Sbjct: 535 DNVLLGNATANLLTGLGGNDTLDGNAGIDTLVGGLGNDSY--TVDVPADVITELLGEGTD 592
Query: 419 RGAAA----RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
+ YI E + + N ++ + G D
Sbjct: 593 QVNVLFASAGTYILAANVENAQIGNSTPGVNLTGNGLGNNLVGNSQANLLAGLDGDDTLD 652
Query: 475 CEEGRFV-----TFDSYLYLGSYDDLRNVFGSDRGAA 506
G DS L D+L G+D AA
Sbjct: 653 GMAGNDTLDGGLGNDSLLGGLGNDNLFGAAGADTLAA 689
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/265 (12%), Positives = 73/265 (27%), Gaps = 7/265 (2%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
+ AD G T A + G
Sbjct: 1810 SANNDVIVGTPGNDTLDGLAGADTLVGLDGDDTYFVDVAGDVVTEGDGAGSGSDRVNVVF 1869
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
G + ++ + + +A +++ + G +
Sbjct: 1870 TAGGTYTLAANVENATIANGTAGVNVTGNALDNVLLGNATANL-----LTGLGGNDTLDG 1924
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
I+ D+ D + + G + L + ++ +N I
Sbjct: 1925 GLGIDTLVGGLGNDFYAIDTLADVVTENPGEGNDGVAVLLAAGATYTLAANVENAGIGNA 1984
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T ++ G++ ++ + GNS NV S+GND G++G DT + +
Sbjct: 1985 TPGVNLTGNALDNTLQGNSQANVLNGSTGNDALYGNAGNDTLL--GGAGSDFLRGDAGND 2042
Query: 326 IVYDANEHKQDFLSDVERLRFADQC 350
+ + +D + +A+
Sbjct: 2043 SIDGGVIADRINYTDGNTVSYANST 2067
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/380 (13%), Positives = 94/380 (24%), Gaps = 66/380 (17%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA--------LHE 127
S + D+ G G
Sbjct: 3178 GGLGNDSLSGGAGNDDLQGGEGIDTLAGGAGNDLLDGGAGSDVYQFAIGGGDDIIEQNDP 3237
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ +L + S GG S+ V++ + +D
Sbjct: 3238 LAGSLDTVVLASPIGGLGSGETTLTRGWHSYDDLVITVNSGTPGAEVVDHLVVHDFLTND 3297
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
++ + I GN + + + + + GDD L + I+ +
Sbjct: 3298 LINLGTIDQIRWLGSGNTL------TQTQILAELLKGTSGDDWL--RGYANTNDSIN-GS 3348
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++GG N T+ +S+ G +G D + G + N+ GND GS G DT
Sbjct: 3349 GGNDTLGGAAGNDTLIGGLGNDSLSGDAGADALDGGAGNDRVVGGDGNDTLTGSGGNDTL 3408
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQ-------------------------------- 335
A S Y ++ D +
Sbjct: 3409 SGEAGSDTYAFGLGFGQEVIEDLGAVGEVDTLKFNVGIRPAEVGVARAGNDLVVRFAGAP 3468
Query: 336 -----------------DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+E+ FAD S +L TA +++ +G +
Sbjct: 3469 GDGVRITDFFDETFSGLGLNRQIEQFSFADGSTWSATAILAKVLVPTAGDDEITGYLGSE 3528
Query: 379 VFESMKHFYEFGLSEGRDIT 398
+ G D
Sbjct: 3529 SLAGLAGNDTIAGGAGNDTL 3548
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/265 (12%), Positives = 73/265 (27%), Gaps = 7/265 (2%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
+ + D G T A + G
Sbjct: 761 SANNDSLVGTPGNDTLDGLAGTDTLVGLDGDDTYFVDVAGDVVTEGDGAGSGSDRVNVVF 820
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
G + ++ + + +A +++ + G +
Sbjct: 821 TAGGTYTLAANVENATIANGTAGVNVTGNALDNVLLGNATANL-----LTGLGGNDTLDG 875
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
I+ D+ D + + G + L + ++ +N I
Sbjct: 876 GLGIDTLVGGLGNDFYAIDTLADVVTENPGEGNDGVAVLLAAGATYTLAANVENAGIGNA 935
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T ++ G++ ++ + GNS NV S+GND G++G DT + +
Sbjct: 936 TPGVNLTGNALDNTLQGNSQANVLNGSTGNDALYGNAGNDTLL--GGAGSDFLRGDAGND 993
Query: 326 IVYDANEHKQDFLSDVERLRFADQC 350
+ + +D + +A+
Sbjct: 994 SIDGGVIADRINYTDGNTVSYANST 1018
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 70/444 (15%), Positives = 120/444 (27%), Gaps = 36/444 (8%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ Y+N + +V S D G + +I V+
Sbjct: 1091 DTLNGENSNRVSYQNAAVAVNVNLATGTATSAADTGAGSDGNDTLININQVRGS-SHADT 1149
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G++ + Q + TI +GG DL+ N +DL + S G +
Sbjct: 1150 LTGSDDLVLTEQFEGRAGADTIDGAGGLDLVRYDNAAAGVN-VDLAGGTASDGYGTTDTL 1208
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANN----VFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ IE GS D + G +A N F GND DG G D Y +
Sbjct: 1209 -----SNIEGARGSKFADTLSGGNAANDALEFFMGLEGNDTIDGGRGYDRAEYTLSTAGV 1263
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ D L +E +R F D S E +++
Sbjct: 1264 NVTLGGAGSGTASDGYGTTDTLISIEGVRGSAFNDTLTGSNAADIFESFEGREGNDNING 1323
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS-DRGAAARHYITHGVK 432
+ G D ++ D Y S +++ +V GS D +
Sbjct: 1324 MGGTDRVVYTASKAGVTVNLATGTASDGYGGTDSLNNIEDVLGSRDFNDSLTGSAADNKL 1383
Query: 433 EGRNPDAF-------KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
EG+ + +L ++ L A G D + V +
Sbjct: 1384 EGQGGNDTLDGGLGNDSLLGGLGNDSLFGAAGADTLAAGPGLDTVDGGADADTLVVLGNF 1443
Query: 486 YLYLGSYDD------LRNVFGSDRGAAARHYITHGVKEGRNPD--------AFKALEYIA 531
Y + + + G D + D +
Sbjct: 1444 ADYTRTRPNATDTRLVFAGTGEDITFRNVESVVFLDGTRTLADVHLNIVSANNDVIVGTP 1503
Query: 532 SHEDLINAFADAPDLVQAGKDHFS 555
++ L + G D +
Sbjct: 1504 GNDTLDGLAGADTLVGLDGDDTYV 1527
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 80/634 (12%), Positives = 140/634 (22%), Gaps = 119/634 (18%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG- 133
+++ + + + I +D G G A + A+G
Sbjct: 2962 TGNELNNRLTGSAAANLLSGLAGNDTLIGGAGSDTLIGGSGDDEYQIDIASDVVTEAVGE 3021
Query: 134 ----LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
+ + GY + + S + + A +V
Sbjct: 3022 GLDLVKIAFTSTAGYTLTANVEEAIVTSAGDTFAVNVTGNTLANALTGHAGANLLVGLDG 3081
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID----- 244
G +L I + I L G I
Sbjct: 3082 DDTLDGGGGNDTLDGGIGSDTAILQGVLIDYAISRPSTTQTRFTHLPSGNTVVISNVEVI 3141
Query: 245 -----------------LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+ + + G + T+A +S+ G +GND + G +
Sbjct: 3142 RFAGGGSPQPLADLIARIGSPGNDVLNGTGGDDTLAGGLGNDSLSGGAGNDDLQGGEGID 3201
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE--------------------NAIIV 327
+GND+ DG +G D + + I + + +
Sbjct: 3202 TLAGGAGNDLLDGGAGSDVYQFAIGGGDDIIEQNDPLAGSLDTVVLASPIGGLGSGETTL 3261
Query: 328 YDANEHKQDFLSDV-----------ERLRFADQCIDSVNVKQRSILEYTASYEDLI---- 372
D + V + D +N+ + + S L
Sbjct: 3262 TRGWHSYDDLVITVNSGTPGAEVVDHLVVHDFLTNDLINLGTIDQIRWLGSGNTLTQTQI 3321
Query: 373 -------------------------QVIGQDVFESMKHFYEFGLSEGRDITF-----DSY 402
G D G D D+
Sbjct: 3322 LAELLKGTSGDDWLRGYANTNDSINGSGGNDTLGGAAGNDTLIGGLGNDSLSGDAGADAL 3381
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
D + G+D + T + G + AF EDL
Sbjct: 3382 DGGAGNDRVVGGDGNDTLTGSGGNDTLSGEAGSDTYAFGLGFGQEVIEDLGAVGEVDTLK 3441
Query: 463 VQVGKDHFSNFGCEEGRFVT----------------FDSYLYLGSYDDLRNVFGSDRGA- 505
VG G + FD + F G+
Sbjct: 3442 FNVGIRPAEVGVARAGNDLVVRFAGAPGDGVRITDFFDETFSGLGLNRQIEQFSFADGST 3501
Query: 506 -------AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
A T G E ++L +A ++ + + G D G
Sbjct: 3502 WSATAILAKVLVPTAGDDEITGYLGSESLAGLAGNDTIAGGAGNDTLSGGDGSD--RLTG 3559
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQ 592
F+ L + DL F S A
Sbjct: 3560 GSGADRFVFDTADAL-VHADLITDFVSGVDRIAL 3592
Score = 44.4 bits (103), Expect = 0.061, Method: Composition-based stats.
Identities = 48/355 (13%), Positives = 87/355 (24%), Gaps = 34/355 (9%)
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND+ + + + + + L + + ++ + + + + + +
Sbjct: 3296 NDLINLGTIDQIRWLGSGNTLTQTQILAELLKGTSGDDWLRGYANTNDSINGSGGNDTLG 3355
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
L + L G D + +G D S G D L
Sbjct: 3356 GAAGNDTLIGGLGNDSLSGDAGADALDGGAGNDRVVGGDGNDTLTGS----GGNDTLSGE 3411
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
GSD A + +++ L++ A A + + V G
Sbjct: 3412 AGSDTYAFGLGFGQEVIEDLGAVGEVDTLKFNVGIRPAEVGVARAGNDLVVRFAGAPGDG 3471
Query: 475 CEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA--------AARHYITHGVKEGRNPDAFKA 526
F FD + F G+ A T G E ++
Sbjct: 3472 VRITDF--FDETFSGLGLNRQIEQFSFADGSTWSATAILAKVLVPTAGDDEITGYLGSES 3529
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
L +A ++ + + G D G F+ L + DL F S
Sbjct: 3530 LAGLAGNDTIAGGAGNDTLSGGDGSD--RLTGGSGADRFVFDTADAL-VHADLITDFVSG 3586
Query: 587 RSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYT 641
A S LS+D L
Sbjct: 3587 VDRIALKASVF-----------------TGLGSVGDVVGLSDHLSYDSDTGTLAY 3624
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 62/187 (33%), Gaps = 7/187 (3%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+ G +D N + Y + + + + G T ++D + G
Sbjct: 7 TDGNDTLVGSAGSVDDALNGGLGNDIYRYSLGSGNDVISDTGGADTIELAD--PLHLYSG 64
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G+++ Q + + L + ++ N + G
Sbjct: 65 WNFYRSGDDLVIDFNGQGQLTVTNQFLGAPIIETLAFADGSALYSFSFSN-----LLTGT 119
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N + + E + G G+D++ GN ++ F G+D G G+D + A +
Sbjct: 120 VGNDVLIGTSSGEVINGGGGDDLIFGNEGDDTLFGGEGDDELSGGPGIDALYGDAGNDEL 179
Query: 317 KIYRFEN 323
+ + ++
Sbjct: 180 HVLKGDS 186
>gi|302875206|ref|YP_003843839.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578063|gb|ADL52075.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 962
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 62/455 (13%), Positives = 114/455 (25%), Gaps = 85/455 (18%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE-----------IGH 130
G + D+ G+G T+ I
Sbjct: 394 TVYGYGGDDLLYGGEGNDILHGGQGDDLLEGGLGNDTLYGEAGQDIYVFRKGDGQDTIND 453
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP------- 183
G + + N S V++ DS+ S+ Y
Sbjct: 454 TAGENNTIIDTLRFEDIDSTEVTLNKSAYDLVITVNGSSDSVRILSYFYSNDYKVEKIEF 513
Query: 184 ---MVSDIVAVQKIY-GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL---- 235
+V DI A+ K Y + I + + I G+D L+ +
Sbjct: 514 QDGVVLDINAIMKGYVYINGTNSNEQISGYCSGENEFIGNVIINGFDGNDTLNGSAGNDK 573
Query: 236 -IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
GG + + ++ G T+ + + G S +D + G +++ G
Sbjct: 574 VYGGNGDDTIVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEKG 633
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFEN------------------------AIIVYDA 330
ND G +G DT+ + I + + A
Sbjct: 634 NDTLTGGAGSDTYVFRKGDGQDIIVDYSGEANTIIDTLKFEDIAASEVSLNCTGYDLIIA 693
Query: 331 NEHKQDFLS----------DVERLRFADQCIDSVNVKQRSILEYTA-------------- 366
D + +E ++F D +N + SI+
Sbjct: 694 VNDSTDSVRIQNYFTADLYKIENIQFKDGTTWDINTIRNSIVYANGTEEKDSLYAAGPVT 753
Query: 367 -----SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLR-NVFG 416
+ L D G D + + LY DD+ G
Sbjct: 754 MNGYGGDDTLRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGNDILYGRVGDDILEGGLG 813
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+D + ++G D + + D
Sbjct: 814 NDTLYGEAGQDVYVFRKGDGQDIIYNSSSLDTDND 848
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 16/318 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
++ T R + + + D IG + + G
Sbjct: 585 GNNGDDTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEKGNDTLTGGAGSD 644
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA---VQ 192
G VD E ++ + ++ + + GY V+D +Q
Sbjct: 645 TYVFRKGDGQDIIVDYSGEANTIIDTLKFEDIAASEVSLNCTGYDLIIAVNDSTDSVRIQ 704
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ A + N +K + +I + G + D +L ++ +
Sbjct: 705 NYFTADLYKIENIQFKDGTTWDINTIRNSIVYANGTEEKD-SLYAAGPVTMN-GYGGDDT 762
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N I I++++ +GND + G N++ + G+D+ +G G DT + A
Sbjct: 763 LRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGNDILYGRVGDDILEGGLGNDTLYGEAG 822
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+Y + + I+Y+++ D ++L F D + + + + +I
Sbjct: 823 QDVYVFRKGDGQDIIYNSSSLDTDN----DKLSFTDVNLSETTFIKTNT-------DLII 871
Query: 373 QVIGQDVFESMKHFYEFG 390
++ ++ ++ +G
Sbjct: 872 KLNETTDSATISGYFNYG 889
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/346 (13%), Positives = 87/346 (25%), Gaps = 39/346 (11%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
I+ + + I G N I+ + E+ GN ++ G N+ S+GND G
Sbjct: 520 DINAIMKGYVYINGTNSNEQISGYCSGEN--EFIGNVIINGFDGNDTLNGSAGNDKVYGG 577
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G DT N +D L + +
Sbjct: 578 NGDDTIV-------------GNNGDDTLEGGAGKDTLRG------SAGKDILKGGSEDDT 618
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L + L G D + +G Y G + + + + A
Sbjct: 619 LNGEIGDDILDGEKGNDTLTGGAGSDTYVFRKGDGQDI-IVDYSGEANTIIDTLKFEDIA 677
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASH---EDLINAFADAPDLVQVGKDHFSNFGCEEG 478
A+ + + + DL +
Sbjct: 678 ASEVSLNCTGYDLIIAVNDSTDSVRIQNYFTADLYKIENIQFKDGTTWDINTIRNSIVYA 737
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDR----GAAARHYITHGVKEGRNPDAFKALEYIASHE 534
LY + G D A + Y G+ +L ++
Sbjct: 738 NGTEEKDSLYAAGPVTMNGYGGDDTLRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGND 797
Query: 535 DLIN---------AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
L + +AG+D + F +G+ I +N
Sbjct: 798 ILYGRVGDDILEGGLGNDTLYGEAGQDVYV-FRKGDGQDIIYNSSS 842
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 42/298 (14%), Positives = 79/298 (26%), Gaps = 55/298 (18%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I+D + L + G I + +I + T+ + + + G GND++
Sbjct: 357 IFDRKAINTL--LVYGTPDKDIITVSSKNETIFALASDDTVYGYGGDDLLYGGEGNDILH 414
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA----------------- 324
G +++ GND G +G D + + I
Sbjct: 415 GGQGDDLLEGGLGNDTLYGEAGQDIYVFRKGDGQDTINDTAGENNTIIDTLRFEDIDSTE 474
Query: 325 ----------IIVYDANEHKQDFLS-------DVERLRFADQCIDSVNVKQRSILEYTAS 367
+I + + LS VE++ F D + +N + + +
Sbjct: 475 VTLNKSAYDLVITVNGSSDSVRILSYFYSNDYKVEKIEFQDGVVLDINAIMKGYVYINGT 534
Query: 368 YEDLIQV---------IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ IG + S G D +Y G+ DD D
Sbjct: 535 NSNEQISGYCSGENEFIGNVIINGFDGNDTLNGSAGND-----KVYGGNGDDTIVGNNGD 589
Query: 419 RGAAARH-----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ G + L + L + G D +
Sbjct: 590 DTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEKGNDTLTGGAGSDTYV 647
Score = 40.2 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 58/231 (25%), Gaps = 5/231 (2%)
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDS-VNVKQRSILEYTASYEDLIQVIGQDVFE 381
N ++VY + +S FA D+ +L + L G D+ E
Sbjct: 364 NTLLVYGTPDKDIITVSSKNETIFALASDDTVYGYGGDDLLYGGEGNDILHGGQGDDLLE 423
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
G+DI + D + + G + +
Sbjct: 424 GGLGNDTLYGEAGQDIY--VFRKGDGQDTINDTAGENNTIIDTLRFEDIDSTEVTLNKSA 481
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
I + + + K F + Y+ N S
Sbjct: 482 YDLVITVNGSSDSVRILSYFYSNDYKVEKIEFQDGVVLDINAIMKGYVYINGTNSNEQIS 541
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ +I + + G D L A ++ + D + G D
Sbjct: 542 GYCSGENEFIGNVIINGF--DGNDTLNGSAGNDKVYGGNGDDTIVGNNGDD 590
>gi|329849530|ref|ZP_08264376.1| hemolysin/adenylate cyclase [Asticcacaulis biprosthecum C19]
gi|328841441|gb|EGF91011.1| hemolysin/adenylate cyclase [Asticcacaulis biprosthecum C19]
Length = 445
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 53/345 (15%), Positives = 96/345 (27%), Gaps = 10/345 (2%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ TL GGV S+ G E + + T +++ ND + G S N+ F
Sbjct: 31 IADTLSGGVDADTIYGLGGHDSLSGGEGDDVLEGATGSDTLNVGDANDSLEGGSGNDQLF 90
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE-HKQDFLSDVERLRFADQ 349
GND G +G DT A + +YKI + ++ D + + +
Sbjct: 91 GGDGNDTLVGGTGADTLVGGAGNDIYKIDNAGDVVVDTDESSWDEIHTSISLVMSDSVSV 150
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ + A+Y + G D + E G D + S+
Sbjct: 151 VVVDRPDNAGLSITGNAAYNWIFGGGGNDTLRGGEGADEVLGGGGDDRLSEGTGDDYSFG 210
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ + G + L + + +I + + D
Sbjct: 211 GDGHDTLDGGEGNDCLFGDDGRDRLVGGEGNDTLFAGSGDDTMIGGEGNDLYYIDSAGDV 270
Query: 470 FSNFGCEEGRFVTFDSYLYLG----SYDDLRNVFGSDRGAAARHYITHGVKEGRNPD--- 522
F + + L L V + + H G D
Sbjct: 271 FVEGHDAGIDGIATNITFSLVGIQIENLSLHGVGAFNGTGNSLHNKMLGNANANILDAGA 330
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
++ ++ LI + L Q D+ G F
Sbjct: 331 GNDSINGGLGNDTLIGGTGNDTLLGQ--LDNDVLTGGSGADLFVF 373
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 56/356 (15%), Positives = 94/356 (26%), Gaps = 42/356 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + T D G G T++ + G
Sbjct: 54 SGGEGDDVLEGATGSDTLNVGDANDSLEGGSGNDQLFGGDGNDTLVGGTGADTLVGGAGN 113
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
N G V D + D TS+ S++ A ++ A I
Sbjct: 114 DIYKIDNAGDVVVDTD-ESSWDEIHTSISLVMSDSVSVVVVDRPDNAGLSITGNAAYNWI 172
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+G + + GGDD L G + + ++
Sbjct: 173 FGG----------GGNDTLRGGEGADEVLGGGGDDRL----SEGTGDDYSFGGDGHDTLD 218
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E N + + +VG GND + S ++ GND++ S D F +
Sbjct: 219 GGEGNDCLFGDDGRDRLVGGEGNDTLFAGSGDDTMIGGEGNDLYYIDSAGDVFVEGHDAG 278
Query: 315 LYKIYRFENAIIVY---------------------------DANEHKQDFLSDVERLRFA 347
+ I +V +AN + D + + +
Sbjct: 279 IDGIATNITFSLVGIQIENLSLHGVGAFNGTGNSLHNKMLGNANANILDAGAGNDSINGG 338
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ L + L G D+F K F F +G D D Y
Sbjct: 339 LGNDTLIGGTGNDTLLGQLDNDVLTGGSGADLFVFYKPFGFFDPGDGIDTITDFYN 394
Score = 44.8 bits (104), Expect = 0.048, Method: Composition-based stats.
Identities = 29/280 (10%), Positives = 64/280 (22%), Gaps = 31/280 (11%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
++ G + D G G D+ + + +
Sbjct: 24 ALIAGTGIADTLSGGVDADTIYGLGGHDSL--SGGEGDDVLEGATGSDTLNVG------- 74
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
D L + L+ G D + + D+
Sbjct: 75 ----------DANDSLEGGSGNDQLFGGDGNDTLVGGTGADTLVGGAGNDIYKIDNAGDV 124
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
D+ D+ + V R +A ++ A++ +
Sbjct: 125 VVDT-------DESSWDEIHTSISLVMSDSVSVVVVDRPDNAGLSITGNAAYNWIFGGGG 177
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTF-DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
+ G D G ++ D Y + G D + + + G
Sbjct: 178 NDTLRGGEGADEVLGGGGDDRLSEGTGDDYSFGGDGHDTLDGGEGNDCL----FGDDGRD 233
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
+ L + + +I + + + D F
Sbjct: 234 RLVGGEGNDTLFAGSGDDTMIGGEGNDLYYIDSAGDVFVE 273
>gi|254422799|ref|ZP_05036517.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196190288|gb|EDX85252.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 784
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 58/366 (15%), Positives = 100/366 (27%), Gaps = 28/366 (7%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S+ F+ + Y ++N D D G + N E G
Sbjct: 360 SLDGSNGFVINGVDSGDYSGYSVSGAGDVNGDGFDDVIIGAYQADPDGVNITGESYVVFG 419
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
N + S F + G+ D++
Sbjct: 420 TDAGFDAVLELSSLDGSNGFILSGIDEFDFSGFSVSGAGDVNGDGF------DDLIIGAF 473
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTE 248
L Y + TI + GDD L + L G N
Sbjct: 474 RAAPNGMRLAGESYVVFGATDIGLSTNTIIGTNGDDTLIGSKNKDLLFGLAGNDFLDGRN 533
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ S+ G + N + +++ G +GND++ G + N+ +G D +G G DT
Sbjct: 534 NSDSLDGGKGNDILNGGRGSDALFGGNGNDILNGGADNDSLDGGNGRDTLNGDKGNDTL- 592
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQ----------DFLSDVERLRFADQCIDSVNVKQ 358
++ + I+ + D + L +
Sbjct: 593 -DGGRGSDALFGNDGNDILNGGKGNDTLDGGKGNDTLDGGRGNDLLNGGRGLDVLDGGRG 651
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRN 413
L A + L G D + + GRD+ D+ + G+ D L
Sbjct: 652 NDSLNGGADNDTLDGGKGNDTLDGGRGNDLLTGGNGRDVLLGSDGDDTLVGGGNNDTLTG 711
Query: 414 VFGSDR 419
G D
Sbjct: 712 GNGRDT 717
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 60/203 (29%), Gaps = 13/203 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
++ G+D+L+ L GG N I S+ G T+
Sbjct: 525 GNDFLDGRNNSDSLDGGKGNDILNGGRGSDALFGGNGNDILNGGADNDSLDGGNGRDTLN 584
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLY 316
+++ G G+D + GN N++ GND DG G DT L
Sbjct: 585 GDKGNDTLDGGRGSDALFGNDGNDILNGGKGNDTLDGGKGNDTLDGGRGNDLLNGGRGLD 644
Query: 317 KIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + ++ D + L R +L + + L+
Sbjct: 645 VLDGGRGNDSLNGGADNDTLDGGKGNDTLDGGRGNDLLTGGNGRDVLLGSDGDDTLVGGG 704
Query: 376 GQDVFESMKHFYEFGLSEGRDIT 398
D F LS G +
Sbjct: 705 NNDTLTGGNGRDTFVLSVGGGVD 727
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/253 (14%), Positives = 66/253 (26%), Gaps = 8/253 (3%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ T + D ++ +
Sbjct: 492 ATDIGLSTNTIIGTNGDDTLIGSKNKDLLFGLAGNDFLDGRNNSDSLDGGKGNDILNGGR 551
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G NG + G ++ D + +D G A +
Sbjct: 552 GSDALFGGNGNDILNGGADNDSLDGGNGRDTLNGDKGNDTLDGGRGSDALFGNDGNDILN 611
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G G K + G D+LD GG N +
Sbjct: 612 GGKGNDTLDGG----KGNDTLDGGRGNDLLNGGRGLDVLD----GGRGNDSLNGGADNDT 663
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N T+ + + G +G DV++G+ ++ ND G +G DTF
Sbjct: 664 LDGGKGNDTLDGGRGNDLLTGGNGRDVLLGSDGDDTLVGGGNNDTLTGGNGRDTFVLSVG 723
Query: 313 SYLYKIYRFENAI 325
+ I F++
Sbjct: 724 GGVDTITDFDSKD 736
>gi|254437418|ref|ZP_05050912.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
gi|198252864|gb|EDY77178.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
Length = 588
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 69/267 (25%), Gaps = 9/267 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ T+Y G D + +DL + + T +
Sbjct: 240 GNDILRGGAGADTLYGGEGVDWVQYIG-SPEGVTVDLTVDGSGFQSASGGDATGDVISGF 298
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E VVGS D + GN N +GND G +G D F + + + V
Sbjct: 299 ERVVGSDHADTLTGNDEGNYLIGGAGNDTLIGGAGADALFGGSGIDIASYATSATGLTVR 358
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D + + +L A L G D
Sbjct: 359 LDGTGSTGNALGDTF----DGIENLIGSGGDDLLVGDAGANVLEGGNGDDTLIGGSGADV 414
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G D + G + G A + E A K ++
Sbjct: 415 MHGQSGDDTVTYADSATGVGARRDGLVGWGGAAGDEIFTV----ENLIGSAHKDTLVGSN 470
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGC 475
++I++ + +G D G
Sbjct: 471 GANVIDSGGGGGTIFALGGDDTLIGGS 497
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 56/208 (26%), Gaps = 13/208 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
++ G D+ T S + G + I
Sbjct: 324 GNDTLIGGAGADALFGGSGIDIASYATSATGLTVRLDGTGSTGNALGDTFD-------GI 376
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+++GS G+D+++G++ NV +G+D G SG D + +
Sbjct: 377 ENLIGSGGDDLLVGDAGANVLEGGNGDDTLIGGSGADVMHGQSGDDTVTYADSATGVGAR 436
Query: 329 DANEHKQDFLSD-----VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ VE L + V ++++ + + G D
Sbjct: 437 RDGLVGWGGAAGDEIFTVENLIGSAHKDTLVGSNGANVIDSGGGGGTIFALGGDDTLIGG 496
Query: 384 KHFYEFGLSEGRDI-TFDSYLYLGSYDD 410
G D F D
Sbjct: 497 SGADVMHGQSGNDTFIFSDSFGADQITD 524
Score = 44.0 bits (102), Expect = 0.087, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 57/240 (23%), Gaps = 27/240 (11%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D+ + G G T++ + G+ Y
Sbjct: 303 GSDHADTLTGNDEGNYLIGGAGNDTLIGGAGADALFGGSGID-----IASYATSATGLTV 357
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
D ++ + D + + +V D A G +
Sbjct: 358 RLDGTGSTGNALGDTFDGIENLIGSGGDDLLVGDAGANVLEGG-----------NGDDTL 406
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGV-----KNYIDLNTESWSSIG------GYEKNMTI 262
++ GDD + + + I G T+
Sbjct: 407 IGGSGADVMHGQSGDDTVTYADSATGVGARRDGLVGWGGAAGDEIFTVENLIGSAHKDTL 466
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G + ++ SG DV G SG DTF + +I FE
Sbjct: 467 VGSNGANVIDSGGGGGTIFALGGDDTLIGGSGADVMHGQSGNDTFIFSDSFGADQITDFE 526
>gi|304394584|ref|ZP_07376503.1| Na-Ca exchanger/integrin-beta4 [Ahrensia sp. R2A130]
gi|303293245|gb|EFL87626.1| Na-Ca exchanger/integrin-beta4 [Ahrensia sp. R2A130]
Length = 1126
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/303 (12%), Positives = 80/303 (26%), Gaps = 25/303 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ I T+ +D + G S + + +I
Sbjct: 782 SDTLIANTGINTLIGLASNDTYSVD-QTGDIVVEAAAEGSDVVYSTATYTLPVNVEALIL 840
Query: 270 ------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G++G++ + GN+ +NV G D GS G DT+ S +
Sbjct: 841 QNGEDLDATGNAGDNQLFGNAGDNVINGGGGKDQMSGSGGNDTYIVD--SSDDSVLENAG 898
Query: 324 AIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ ++E L +++ + + + +L G D+
Sbjct: 899 EGYDTVQSSVDWGLAGNIEALELTGSGNLNASGNDLANTITGNSGNNNLDGGAGTDLMIG 958
Query: 383 MKHFYEFG-----------LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+ G D F S Y+ + + + + +++ +
Sbjct: 959 GAGNDTYRVDNSGDIVTEMAGGGTDAVFSSVDYILASEVESLFLTGTAVSGTGNALSNAI 1018
Query: 432 KEGRNPDAFKALEY----IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ E + + D I F G G + F +
Sbjct: 1019 SGNDAVNVLNGGEGSDYMLGAGGDDIFVITKLAGSSVDTIGDFEGAGVAGGDRIGFSAAD 1078
Query: 488 YLG 490
+
Sbjct: 1079 FGA 1081
Score = 37.8 bits (86), Expect = 6.4, Method: Composition-based stats.
Identities = 31/255 (12%), Positives = 48/255 (18%), Gaps = 11/255 (4%)
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + F Q + A
Sbjct: 714 NVAGGATVQLNSDGTFDFNTNGAYAYLTAGSTATNSFTYQLNGDDTATVTVTINGVAGDG 773
Query: 370 DLIQVIGQ-DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
D+ D + D S G GSD + Y
Sbjct: 774 DVFTGTPNSDTLIANTGINTLIGLASNDTY--SVDQTGDIVVEAAAEGSDVVYSTATYTL 831
Query: 429 HGVKEGRNPDAFKAL--EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
E + L A L D GKD S G + V
Sbjct: 832 PVNVEALILQNGEDLDATGNAGDNQLFGNAGDNVINGGGGKDQMSGSGGNDTYIVDSSDD 891
Query: 487 LYLGSYDDLRNVFGSDRGAAAR------HYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
L + + + S G D + + + +L
Sbjct: 892 SVLENAGEGYDTVQSSVDWGLAGNIEALELTGSGNLNASGNDLANTITGNSGNNNLDGGA 951
Query: 541 ADAPDLVQAGKDHFS 555
+ AG D +
Sbjct: 952 GTDLMIGGAGNDTYR 966
>gi|188584221|ref|YP_001927666.1| hypothetical protein Mpop_5035 [Methylobacterium populi BJ001]
gi|179347719|gb|ACB83131.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 137
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 13/85 (15%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F + Y+ + D+ F P + H+ ++G+ EGR + F+ + YL + D+
Sbjct: 32 GFDPIYYLYWYPDVR-VFPQGPLV------HYIHYGWREGRDPSAGFSTEGYLRANPDVR 84
Query: 581 NVFGSDRSAAAQHYITHGMKEGRAL 605
H++ G+ EGR
Sbjct: 85 ----ESGCNPLVHFVESGLSEGRQG 105
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHED 535
FD YL Y D+R HYI +G +EGR+P F Y+ ++ D
Sbjct: 27 RTPLPGFDPIYYLYWYPDVRVF----PQGPLVHYIHYGWREGRDPSAGFSTEGYLRANPD 82
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ + P + HF G EGR
Sbjct: 83 VRES-GCNPLV------HFVESGLSEGR 103
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 455
FD YL Y D+R HYI +G +EGR+P F Y+ ++ D+ +
Sbjct: 31 PGFDPIYYLYWYPDVRVF----PQGPLVHYIHYGWREGRDPSAGFSTEGYLRANPDVRES 86
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
+ HF G EGR
Sbjct: 87 GCNP-------LVHFVESGLSEGR 103
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 13/86 (15%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDDL 495
F + Y+ + D+ Q H+ ++G EGR F + YL + D+
Sbjct: 31 PGFDPIYYLYWYPDV-------RVFPQGPLVHYIHYGWREGRDPSAGFSTEGYLRANPDV 83
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNP 521
R H++ G+ EGR
Sbjct: 84 RESG----CNPLVHFVESGLSEGRQG 105
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 10/80 (12%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
+ Y Y D ++V Q H+ +G EGRD + F + YL + D+R
Sbjct: 32 GFDPIYYLYWYPD-VRVFPQGPLV---HYIHYGWREGRDPSAGFSTEGYLRANPDVR--- 84
Query: 416 GSDRGAAARHYITHGVKEGR 435
H++ G+ EGR
Sbjct: 85 -ESGCNPLVHFVESGLSEGR 103
Score = 44.4 bits (103), Expect = 0.067, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
F+P YL Y D+ HYI +G +EGR
Sbjct: 31 PGFDPIYYLYWYPDVRVFPQG----PLVHYIHYGWREGR 65
>gi|126729474|ref|ZP_01745288.1| type I secretion target repeat protein [Sagittula stellata E-37]
gi|126710464|gb|EBA09516.1| type I secretion target repeat protein [Sagittula stellata E-37]
Length = 907
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/258 (17%), Positives = 68/258 (26%), Gaps = 14/258 (5%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+I G N T+ +S+ G G D ++G S N+ +G DV G SGLD
Sbjct: 416 GGTGNDTIYGEAGNDTLDGGADDDSLTGGEGTDSLLGGSGNDTLEGGAGADVLSGGSGLD 475
Query: 306 TFFYYAPSYLYKIY----RFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQ 358
Y + + F D N D + + L D
Sbjct: 476 FASYASSDAGVTVDLATNTFSGGDATGDTNGGGLDGIIGSAFDDSLTGYDAQGTDPEGIW 535
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+++ + + + G D G D D L G D
Sbjct: 536 TNVIYGGGGNDTIDGLGGDDSLYGEDGNDSVDGGYGNDHVSGGTG----NDTLSGGAGVD 591
Query: 419 RGAAARHYITHGVKEGRN---PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
EG + A L + A + + D + + S
Sbjct: 592 TLDGGSEDDVLAGGEGADSIAGGAGNDLIHAAQGDTIDAGGGDDTITLVDLAEAGSAAIF 651
Query: 476 EEGRFVTFDSYLYLGSYD 493
EG L
Sbjct: 652 IEGSTTGQSGGDTLNLNG 669
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 76/601 (12%), Positives = 135/601 (22%), Gaps = 40/601 (6%)
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
V T+ ++ S+ + + + + D D I +
Sbjct: 105 MVAGRTYTVSAYDSNPNVAAGDIAFSFRDYTNGVIEGTSGDDSIDPAFLDIHGESPDDTT 164
Query: 124 ALHEIGHALGLMHP-----GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
+ A G + + G D Y + TS S S
Sbjct: 165 GIDADSIAAGAGNDTVVAGWGNDTVLGEDGADLIYGDYGSYTSDNIAGDLNWSQQGPSGT 224
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
A D + G GNN EV S + Q G L L G
Sbjct: 225 NLAGGFTQDTGNIDVTLGF--TGTGNNNPTFEVDTSQSQYSQADEGFSGTSSLYLFGQGD 282
Query: 239 VKN---YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV-----FF 290
+ + +S+ N++ + + + + A+
Sbjct: 283 GATSRTTMTFGRSAGASVEDEVVNVSFRINDIDWGANNHTDQITINAYDADGTPVAVTIT 342
Query: 291 ESSGN----DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
S + + + + S L +I + + N V ++F
Sbjct: 343 AGSTDTVSGNTITAGTVAEATGDAGGSALIEIAGPVTTVEIIYGNLQSNTQGIWVTDVQF 402
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
I + L + + G D + EG D
Sbjct: 403 EAVPI----AQGDDSLSGGTGNDTIYGEAGNDTLDGGADDDSLTGGEGTDSLLGGSG--- 455
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
D L G+D + S D +G
Sbjct: 456 -NDTLEGGAGADVLSGGSGLDFASYASSDAGVTVDLATNTFSGGDATGDTNGGGLDGIIG 514
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
+ + + + Y N G Y G
Sbjct: 515 SAFDDSLTGYDAQGTDPEGIWTNVIYGGGGNDTIDGLGGDDSLYGEDGNDSVDGGYGNDH 574
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYL--TSYDDLWNVFG 584
+ ++ L + D G E SI L + D + G
Sbjct: 575 VSGGTGNDTLSGGAGVDTLDGGSEDD--VLAGGEGADSIAGGAGNDLIHAAQGDTIDAGG 632
Query: 585 SDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYF 644
D + G S F + D +L+ D + + +D
Sbjct: 633 GDDTITLVDLAEAG---------SAAIFIEGSTTGQSGGDTLNLNGVADRGTMQITSDVD 683
Query: 645 G 645
G
Sbjct: 684 G 684
Score = 40.9 bits (94), Expect = 0.65, Method: Composition-based stats.
Identities = 55/398 (13%), Positives = 107/398 (26%), Gaps = 29/398 (7%)
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
+ T ++ + D + PMV+ Y + +I +
Sbjct: 78 TGQTFQVAQLEIEGGGADGYYTLSEQPMVAGRTYTVSAYDSNPNVAAGDIAFSFRDYTNG 137
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
I + GDD +D ++D++ ES G +IA ++VV G
Sbjct: 138 ----VIEGTSGDDSID-------PAFLDIHGESPDDTTG-IDADSIAAGAGNDTVVAGWG 185
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
ND V+G ++ + G+ D +G N
Sbjct: 186 NDTVLGEDGADLIYGDYGSYTSDNIAGD----LNWSQQGPSGTNLAGGFTQDTGNIDVTL 241
Query: 337 --FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ F S + T+S + + GQ + + FG S G
Sbjct: 242 GFTGTGNNNPTFEVDTSQSQYSQADEGFSGTSS----LYLFGQGDGATSRTTMTFGRSAG 297
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
+ + +D+ + + + S + +
Sbjct: 298 ASVEDEVVNVSFRINDIDWGANNHTDQITIN------AYDADGTPVAVTITAGSTDTVSG 351
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
A + + D + E VT +Y + + ++ +D I G
Sbjct: 352 NTITAGTVAEATGDAGGSALIEIAGPVTTVEIIYGNLQSNTQGIWVTDVQF-EAVPIAQG 410
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ A ++ L D G D
Sbjct: 411 DDSLSGGTGNDTIYGEAGNDTLDGGADDDSLTGGEGTD 448
>gi|188580624|ref|YP_001924069.1| glycosyl transferase group 1 [Methylobacterium populi BJ001]
gi|179344122|gb|ACB79534.1| glycosyl transferase group 1 [Methylobacterium populi BJ001]
Length = 1301
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/254 (19%), Positives = 82/254 (32%), Gaps = 25/254 (9%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
+FD Y Y DL + G DR +HY HG +EGR P+A + + + A
Sbjct: 40 SFDPVFYRRYYPDL-AILGDDRKLLRQHYAKHGRREGRAPNAASLIAALEGESGPLPADF 98
Query: 458 DAP------------DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR---NVFGSD 502
+H+ FG EGR D Y+ + G
Sbjct: 99 IPSHYRALHDDLTALTEPWELGEHYLRFGRFEGRTYAADLSALEQEYEAMLASRAAPGGL 158
Query: 503 RGAA--ARHYITHGVKEGRNPDAFKALEYIASHEDLI-NAFADAPDLVQAGKDHFSNFGY 559
R AA A ++ V +P A+ L + L P G F G
Sbjct: 159 RLAARPAESFVQLLVGARVSPGAWLDLFMLHEFGLLNEAWLPRPPASRIEGLVVFLTEGV 218
Query: 560 EEGRSIT----FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSV 615
I+ F+PD Y ++ D G +H+++ G+ + + + +
Sbjct: 219 GRLAPISLRLRFDPDFYRSNNPD--APVGIRDVDLYRHWLSEGVPKREPGTEAAALLQLI 276
Query: 616 MNLSEKSRDKADLS 629
+ +
Sbjct: 277 GEETFPESFDEAVY 290
>gi|229529479|ref|ZP_04418869.1| RTX (Repeat in toxin) cytotoxin [Vibrio cholerae 12129(1)]
gi|229333253|gb|EEN98739.1| RTX (Repeat in toxin) cytotoxin [Vibrio cholerae 12129(1)]
Length = 2630
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 56/222 (25%), Gaps = 18/222 (8%)
Query: 230 LLDL---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + I+++ +++ G + A + G G+DV +
Sbjct: 2251 TFDFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTS 2310
Query: 287 NVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N+F GND + G G DT A + + + D
Sbjct: 2311 NIFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDT 2369
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
S + + + + + + G D ++ G D+
Sbjct: 2370 GSGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDV 2429
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 2430 VK-----LMGYHAVLNGGDGDDHLIAAAISKFSQFNGGEGRD 2466
Score = 44.0 bits (102), Expect = 0.072, Method: Composition-based stats.
Identities = 36/319 (11%), Positives = 74/319 (23%), Gaps = 70/319 (21%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
DI N + + + + +G + I
Sbjct: 2263 GDGDINISLGNYNF----NWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI------ 2312
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G N + G +N +M D+ + A D +
Sbjct: 2313 FTGGEGNDMGVLMGREN----------MMFGGDGNDTAVVAGRINHVFLGAGDDQS---- 2358
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
++ + + SG + +D +S
Sbjct: 2359 ----------FVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQD-----------YSVTI 2397
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLD 305
G + + ++ G+ N +GNDV +G G D
Sbjct: 2398 GNNNQVELGAGNDFANIFGNY-----------NRINAGAGNDVVKLMGYHAVLNGGDGDD 2446
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRS 360
A S + E ++ +DV+ + ID + +
Sbjct: 2447 HLIAAAISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNI 2506
Query: 361 ILEYTASYEDLIQVIGQDV 379
+ + + G D+
Sbjct: 2507 VFNGIDWQKLWFERSGYDL 2525
>gi|158339548|ref|YP_001520937.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
gi|158309789|gb|ABW31405.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
Length = 1365
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 66/517 (12%), Positives = 128/517 (24%), Gaps = 60/517 (11%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI----LSHNALHEIGH-------ALGLM 135
G+ T S + R G G I +N + GH +
Sbjct: 55 GWKNTLDGGSGNDYLHAIGGQNTMRGGTGNDEIHAIGGRNNVRGDSGHDYIRAWGGSNWV 114
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM------PQDSMMDASFGYCATPMVSDIV 189
H G +N V G+ N ++++ + + G D
Sbjct: 115 HGGDHNDNIEVGGISNTVYGGGHDDYIVAWGGRNSLHGEWGNDTIRAGGGSNWVHGGDGF 174
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG----GVKNYIDL 245
K++GA G + TI GDD + G + ++
Sbjct: 175 DNIKVWGAHNTVYGG---GHNDYIESWGGRNTIRGEWGDDTIRAWGGSNWVHGGDGHDNI 231
Query: 246 NTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND-------- 296
S ++ G N I ++ G GND + +N G D
Sbjct: 232 VVGGISNTVYGGGHNDHIEAWGGRNTIRGEWGNDTIRAGGGSNYVHGGDGYDNIKVWGAH 291
Query: 297 -VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY-DANEHKQDFLSDVERLRFADQCIDSV 354
G D + A + ++Y + + D S +R+
Sbjct: 292 NTVYGGGHND--YIEAVAAGNRLYGEWGHDHIKAFGGSNFVDGGSGNDRIEIFGIGNTVY 349
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ A+ + G D ++ +EG + + Y L
Sbjct: 350 GGSGDDHITTAAASNTIHAGSGNDKVVAVGGKNTIHGNEGHNTLIAAGGYNR----LTAG 405
Query: 415 FGSDRGAAARHYIT----HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+G+D A Y HG + + ++ + G++
Sbjct: 406 WGNDTLIAVGGYNNMDAGHGHNTLVGVGGYNNMNAGYGNDFIFGFGGANKINAGHGRNTV 465
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR----------- 519
G + +G G + + G
Sbjct: 466 IGLGGANVINSGTGNDTIIGVGGANVVNAGDGNNVVIGFGGLNKLHSGNGRDIMVGVAAG 525
Query: 520 ----NPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ + + + L + + A +
Sbjct: 526 NWLTSAGGNDIMIGLGAANYLNGGAGNDILVSAAALN 562
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/277 (15%), Positives = 82/277 (29%), Gaps = 16/277 (5%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+L GG N I + ++++ G E N + ++ G +G D+++G N+ F
Sbjct: 973 SLSGGKGNDIMVGAGKFNTMLGGEGNDILLGGGKTNTMKGGAGADIIVGGGKMNLLFGGD 1032
Query: 294 GNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
GND+ G+ + F + E I+ + + +
Sbjct: 1033 GNDLILGAGKTNIFKGGQGDDIILGAGKKNVLKGGEGNDIILGGGKTNSFKGDAGKDILI 1092
Query: 347 ADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ + IL LI G D ++ F +G DI L
Sbjct: 1093 GGGTKNVLKGGAGDDILIGGGKENKLIGGKGNDFILAIGKKNTFDGGKGDDIILG----L 1148
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRN----PDAFKALEYIASHEDLINAFADAPD 461
G + +++ G+D + G N ++ + +
Sbjct: 1149 GQENKIKSGSGNDIVLVKGAKNSFVSLGGLNRIYGAGKNNTIQGGQDKDTIHAGGESNTY 1208
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
G D ++G + Y D
Sbjct: 1209 DAGAGDDTLISYGNNITLTGGAGNDTYQIGGKDAFGA 1245
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 61/493 (12%), Positives = 118/493 (23%), Gaps = 49/493 (9%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ G G LH IG M G+ N G
Sbjct: 40 NYLYGHGGNDTLRAVGWKNTLDGGSGNDY------LHAIG-GQNTMRGGTGNDEIHAIGG 92
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
N+ DS + ++ D ++ G G
Sbjct: 93 RNNVRGDSGHDYIRAWGGSNWVHG------------GDHNDNIEVGGISNTVYGG---GH 137
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ +++ G+D + + + + +I + + T+ +
Sbjct: 138 DDYIVAWGGRNSLHGEWGNDTIRAGGGSNWVH----GGDGFDNIKVWGAHNTVYGGGHND 193
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G + + G ++ G++ G G D S + I +
Sbjct: 194 YIESWGGRNTIRGEWGDDTIRAWGGSNWVHGGDGHDNIVVGGISNTVYGGGHNDHIEAWG 253
Query: 330 A-----NEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
E D + + D + + + + + V +
Sbjct: 254 GRNTIRGEWGNDTIRAGGGSNYVHGGDGYDNIKVWGAHNTVYGGGHNDYIEAVAAGNRLY 313
Query: 382 SM---KHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHY----ITHGVK 432
H FG S D D G + + G D A G
Sbjct: 314 GEWGHDHIKAFGGSNFVDGGSGNDRIEIFGIGNTVYGGSGDDHITTAAASNTIHAGSGND 373
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLG 490
+ + H LI A G D G ++ + +G
Sbjct: 374 KVVAVGGKNTIHGNEGHNTLIAAGGYNRLTAGWGNDTLIAVGGYNNMDAGHGHNTLVGVG 433
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRN----PDAFKALEYIASHEDLINAFADAPDL 546
Y+++ +G+D GRN + ++ +I
Sbjct: 434 GYNNMNAGYGNDFIFGFGGANKINAGHGRNTVIGLGGANVINSGTGNDTIIGVGGANVVN 493
Query: 547 VQAGKDHFSNFGY 559
G + FG
Sbjct: 494 AGDGNNVVIGFGG 506
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 56/391 (14%), Positives = 95/391 (24%), Gaps = 43/391 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +Y GG+D L GG N +++ G N I
Sbjct: 29 GNDTLIGYMPVNYLYGHGGNDTLRAVGWKNTLDGGSGNDYLHAIGGQNTMRGGTGNDEIH 88
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD--------GSSGLDTFFYYAPSYL 315
+V G SG+D + +N ND + G D +
Sbjct: 89 AIGGRNNVRGDSGHDYIRAWGGSNWVHGGDHNDNIEVGGISNTVYGGGHDDYIVAWGGRN 148
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ N I + + ++ +E +
Sbjct: 149 SLHGEWGNDTIRAGGGSNWVHGGDGFDNIKVWGAHNTVYGGGHNDYIESWGGRNTIRGEW 208
Query: 376 GQDVFESMKHFYEFGLSEGRD----ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D + +G D + +Y G ++D +G R + +
Sbjct: 209 GDDTIRAWGGSNWVHGGDGHDNIVVGGISNTVYGGGHNDHIEAWGG-RNTIRGEWGNDTI 267
Query: 432 KEGRNPD--------------AFKALEYIASHEDLINAFADAPDLVQV---------GKD 468
+ G + Y H D I A A L G
Sbjct: 268 RAGGGSNYVHGGDGYDNIKVWGAHNTVYGGGHNDYIEAVAAGNRLYGEWGHDHIKAFGGS 327
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
+F + G R F + Y + + A+ + G + +
Sbjct: 328 NFVDGGSGNDRIEIFGIGNTV--YGGSGDDHITTAAASNTIHAGSGNDKVVAVGGKNTIH 385
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
H LI A G D G
Sbjct: 386 GNEGHNTLIAAGGYNRLTAGWGNDTLIAVGG 416
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 46/335 (13%), Positives = 88/335 (26%), Gaps = 20/335 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE-------- 127
++ +GY + + + + G H
Sbjct: 270 GGGSNYVHGGDGYDNIKVWGAHNTVYGGGHNDYIEAVAAGNRLYGEWGHDHIKAFGGSNF 329
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ G + G VYG D + S + + + A G
Sbjct: 330 VDGGSGNDRIEIFGIGNTVYGGSGDDHITTAAASNTIHAGSGNDKVVAVGGKNTIHGNEG 389
Query: 188 IVAVQKIYGAPKGSLGNN-----IYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLI 236
+ G + + G T+ GG + + D
Sbjct: 390 HNTLIAAGGYNRLTAGWGNDTLIAVGGYNNMDAGHGHNTLVGVGGYNNMNAGYGNDFIFG 449
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N I+ + IG N+ I T ++++G G +VV NNV G +
Sbjct: 450 FGGANKINAGHGRNTVIGLGGANV-INSGTGNDTIIGVGGANVVNAGDGNNVVIGFGGLN 508
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+G D A + +I A + + + A +
Sbjct: 509 KLHSGNGRDIMVGVAAGNWLTSAGGNDIMIGLGAANYLNGGAGNDILVSAAALNVQVGGE 568
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
Q ++ + +G+D + M + G
Sbjct: 569 GQDVMVALGKANAMAGDTVGKDTLKKMAEDLDLGS 603
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 37/313 (11%), Positives = 78/313 (24%), Gaps = 25/313 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N T+ + + + G GND + N SGND G +T
Sbjct: 23 TKHGGWGNDTLIGYMPVNYLYGHGGNDTLRAVGWKNTLDGGSGNDYLHAIGGQNTMR--G 80
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVER-LRFADQCIDSVNVKQRSILEYTASYED 370
+ +I+ V + H + D + + + +
Sbjct: 81 GTGNDEIHAIGGRNNVRGDSGHDYIRAWGGSNWVHGGDHNDNIEVGGISNTVYGGGHDDY 140
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
++ G++ G ++++ G D V+G+ Y
Sbjct: 141 IVAWGGRNSLHGEWGNDTIRAGGG-----SNWVHGGDGFDNIKVWGAHNTV----YGGGH 191
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+ + + + G D+ G +Y G
Sbjct: 192 NDYIESWGGRNTIRGEWGDDTIRAWGGSNWVHGGDGHDNIVVGGISN--------TVYGG 243
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
++D +G G R + ++++ A
Sbjct: 244 GHNDHIEAWGGRNTIR----GEWGNDTIRAGGGSNYVHGGDGYDNIKVWGAHNTVYGGGH 299
Query: 551 KDHFSNFGYEEGR 563
D + R
Sbjct: 300 ND-YIEAVAAGNR 311
Score = 41.3 bits (95), Expect = 0.50, Method: Composition-based stats.
Identities = 22/215 (10%), Positives = 47/215 (21%), Gaps = 20/215 (9%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDT-----FFYYAPSYLYKIY 319
+ +D ++ N GND+ G +G D +
Sbjct: 815 GANSDTMVALGEANFLLGGKGNDIQFSHGLANALFGGNGADVQVTLGAVNFLSGGQGDDI 874
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + D + + + F + ++ + ++ G D+
Sbjct: 875 QVAGGKVNVVDGGLGNDIQASIGKFNF------LKGGQGDDLMLAGGKFNMMMGQDGNDI 928
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
G DI + + G G
Sbjct: 929 MIGGGMLNTMMGGAGNDIMVGGGKLNKMLAGIGDDLVIGGGKVNSLSGGKGNDIMVGAGK 988
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
F + ++ L+ G D G
Sbjct: 989 FNTMLGGEGNDILLGGGKTNTMKGGAGADIIVGGG 1023
Score = 39.4 bits (90), Expect = 1.8, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 34/110 (30%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ I G KN TI +++ ++ + ++ N G +G DT+
Sbjct: 1176 GGLNRIYGAGKNNTIQGGQDKDTIHAGGESNTYDAGAGDDTLISYGNNITLTGGAGNDTY 1235
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+++ D + + L A+ +++
Sbjct: 1236 QIGGKDAFGASLGANPGGTRTTTIDNRGDASTTDKLLLGANVDYHNIDFS 1285
>gi|307155173|ref|YP_003890557.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
gi|306985401|gb|ADN17282.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
Length = 966
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 94/297 (31%), Gaps = 13/297 (4%)
Query: 191 VQKIYGAP-KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK-------NY 242
+YG +L I + I ++ G+D+ + G V N
Sbjct: 576 NDDLYGGNGDDNLEGGI--GDDLLDGGTGIDSLSGGTGNDIYIVDNSGDVVTETSTITNE 633
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
ID S + G I T + G++ N+ + GN+A N+ +GND G +
Sbjct: 634 IDTVKSSINYSLGDNLEDLILTGTSAINGTGNNLNNTLTGNTAANILDGGTGNDTLIGGA 693
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSI 361
G DT+ + + + I + +++E+L + I+ +
Sbjct: 694 GNDTYIVDNTADVVIETSTLSTEIDTVQSSVTYSLGNNLEKLILSGTSAINGTGNALNNT 753
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ ++ L G D + + DI ++ G D +++ A
Sbjct: 754 ITGNSANNILDGSTGADTLIGGGGNDLYIVDNTGDIVTETSTLAGEIDTVQSSITYTLKA 813
Query: 422 AARHYITHGVK--EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ G G + +++ L + G D + +
Sbjct: 814 NVENLTLTGTSLINGTGNALNNIITGNSNNNTLTGNAGSDILIGGGGNDTLNLGLND 870
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 60/509 (11%), Positives = 132/509 (25%), Gaps = 41/509 (8%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
TS+ S + F ++N + ++ + + +I +
Sbjct: 366 TSLFSSVNFGTTNTSSYVLGSGILLTTGDGQPPLSNTSSSYSTANAVAGDTDIEQIIQNV 425
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
+Y+ ++S VM D SF A MV +
Sbjct: 426 FPGAGTTYDATVLELSFTTPANSNSISLDVMFGSDEYPEWADTSFVDIAGIMVDGVNYGL 485
Query: 193 K-----------IYGAPKGSLGNNIYKIEVQQKDSPFIQTIY----DSGGDDLLDLTLIG 237
G+L +N I + D +SG L + +
Sbjct: 486 FNQNSSQPLSILSQNVIDGNLTDNTAGILSIEYDGISSPLRVVAALNSGTTHTLKIAIAD 545
Query: 238 GVKNYID---------LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L +S ++ N + +++ G G+D++ G + +
Sbjct: 546 TGDQIYDSGLFVSNLKLTNQSNNNGVSLINNDDLYGGNGDDNLEGGIGDDLLDGGTGIDS 605
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+GND+ + + I + ++E L
Sbjct: 606 LSGGTGNDI---------YIVDNSGDVVTETSTITNEIDTVKSSINYSLGDNLEDLILTG 656
Query: 349 -QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
I+ + L + L G D + + D+ ++
Sbjct: 657 TSAINGTGNNLNNTLTGNTAANILDGGTGNDTLIGGAGNDTYIVDNTADVVIETSTLSTE 716
Query: 408 YDDLRNVFGSDRGAAARHYITHGVK--EGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
D +++ G I G G + +++ L + +
Sbjct: 717 IDTVQSSVTYSLGNNLEKLILSGTSAINGTGNALNNTITGNSANNILDGSTGADTLIGGG 776
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK--EGRNPDA 523
G D + + + ++ G D +++ A + G G
Sbjct: 777 GNDLYIV---DNTGDIVTETSTLAGEIDTVQSSITYTLKANVENLTLTGTSLINGTGNAL 833
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKD 552
+ +++ L + G D
Sbjct: 834 NNIITGNSNNNTLTGNAGSDILIGGGGND 862
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 70/287 (24%), Gaps = 8/287 (2%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWSSIGGYEKNMTIAQH 265
+P TI ++ G + + I L + I N+ +
Sbjct: 204 SVNLSNPTNATIKNNSGTVTISDSNIIVNNTLESTSSTILPANIDNLILLGTSNIDGTGN 263
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++ G+ ++ + G + +++ + GND G G D S
Sbjct: 264 ANNNTLTGNGVDNTLSGEAGDDLLYGLGGNDTLMGGDGNDHLIGDGDSANNPQPDPNILT 323
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ D L+ L +S ++ + L + + +
Sbjct: 324 PNVNVFTGFNDTLTAF-DLGKNILASNSGITITNAVYTGALNATSLFSSVNFGTTNTSSY 382
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
G+ S N D I + LE
Sbjct: 383 VLGSGILLTTGDGQPPLSNTSSSYSTANAVAGDTD--IEQIIQNVFPGAGTTYDATVLEL 440
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ N+ + +++ + + D Y
Sbjct: 441 SFTTPANSNSISLDVMFGSDEYPEWADTSFVDIAGIMVDGVNYGLFN 487
>gi|298291346|ref|YP_003693285.1| glycosyl transferase family 2 [Starkeya novella DSM 506]
gi|296927857|gb|ADH88666.1| glycosyl transferase family 2 [Starkeya novella DSM 506]
Length = 608
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 13/83 (15%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
F Y+ H + I H+ G+ G S F+ YL++ D+
Sbjct: 35 FDEAWYLEQHPEFIG-------PYAQPLRHYLEIGWRRGDAPSPYFDAAHYLSANPDVAA 87
Query: 582 VFGSDRSAAAQHYITHGMKEGRA 604
HY+ G EGRA
Sbjct: 88 A----GVNPLLHYVRFGRNEGRA 106
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 26/171 (15%)
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDL 536
G+ FD YL + + + RHY+ G + G P F A Y++++ D+
Sbjct: 30 GQSGLFDEAWYLEQHPEFIGPY----AQPLRHYLEIGWRRGDAPSPYFDAAHYLSANPDV 85
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
A P L H+ FG EGR++ P D + A Y
Sbjct: 86 AAA-GVNPLL------HYVRFGRNEGRAMRAMPQ------TDAADDIAFSVILAT--YNR 130
Query: 597 HGMKEG--RALGISGMQFKSVMNLSEKSRDKADL----SLSFDHKKVDLYT 641
G+ E R++ + ++ + + S D + + + +
Sbjct: 131 AGIIEDSIRSILAQTHRNFELIIVDDGSADGTEALVRERFAAEFADGRITY 181
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDL 452
G+ FD YL + + + RHY+ G + G P F A Y++++ D+
Sbjct: 30 GQSGLFDEAWYLEQHPEFIGPYA----QPLRHYLEIGWRRGDAPSPYFDAAHYLSANPDV 85
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRF 480
A + H+ FG EGR
Sbjct: 86 AAAGVNPLL-------HYVRFGRNEGRA 106
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 13/85 (15%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDD 494
F Y+ H + I +A H+ G G + FD+ YL + D
Sbjct: 32 SGLFDEAWYLEQHPEFIGPYAQP-------LRHYLEIGWRRGDAPSPYFDAAHYLSANPD 84
Query: 495 LRNVFGSDRGAAARHYITHGVKEGR 519
+ + HY+ G EGR
Sbjct: 85 VAAAGVN----PLLHYVRFGRNEGR 105
Score = 44.8 bits (104), Expect = 0.053, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 11/95 (11%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFD 400
RL+ D + + Y + + I + ++H+ E G G FD
Sbjct: 20 RLKTEDIELVGQSGLFDEAW-YLEQHPEFIGPYA----QPLRHYLEIGWRRGDAPSPYFD 74
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
+ YL + D+ HY+ G EGR
Sbjct: 75 AAHYLSANPDVAAA----GVNPLLHYVRFGRNEGR 105
>gi|7341370|gb|AAF61270.1|AF244994_1 membrane type-3 matrix metalloproteinase [Scyliorhinus torazame]
Length = 613
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 54/211 (25%), Gaps = 55/211 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-- 75
L Q W + I Y T R A W V LTFEE
Sbjct: 126 LTGQKWHHKHITYSIKNFTPKVGKL-------ETHRAIRRAFDVWQNVTPLTFEEIPYVE 178
Query: 76 ------HSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI + ++ + P + D+
Sbjct: 179 LENKKRDVDITIMFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 238
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A HE+GHALGL H + + D EN
Sbjct: 239 HDGNDLFLVAAHELGHALGLEHSNDPSAIMAPFYQYMDTEN------------------- 279
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
F D+ +QKIYG P
Sbjct: 280 --FQLPQ----DDLQGIQKIYGPPDKIAHPT 304
>gi|300981333|ref|ZP_07175469.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 45-1]
gi|301050621|ref|ZP_07197489.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 185-1]
gi|300297687|gb|EFJ54072.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 185-1]
gi|300408993|gb|EFJ92531.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 45-1]
Length = 1024
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 44/151 (29%), Gaps = 25/151 (16%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + N + +++ G +G+D + G N+ +GN
Sbjct: 732 FGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGGAGN 791
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D S +V L
Sbjct: 792 NYLNGGDGDDELQVQGNS-----------------------LAKNV--LSGGKGNDKLYG 826
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ +L+ + L G D++ + +
Sbjct: 827 SEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 37.8 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 42/249 (16%), Positives = 70/249 (28%), Gaps = 14/249 (5%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------APSYLYKIYRFENAIIV 327
G+D V ++ + + G+DV DT + + Y + R +
Sbjct: 617 GDGDDKVFLSAGSANIYAGKGHDVVYY-DKTDTGYLTIDGTKATEAGNYTVTRVLGGDVK 675
Query: 328 YDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E + E+ ++ +N K + + S E+LI D F K
Sbjct: 676 VLQEVVKEQEVSVGKRTEKTQYRSYEFTHINGKNLTETDNLYSVEELIGTTRADKFFGSK 735
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
F ++G D + Y D N + Y G + L
Sbjct: 736 FTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGGAGNNYLN 795
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
++L V G EG D D L+ +G+D
Sbjct: 796 GGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGA----DLLDGGEGNDLLKGGYGNDIY 851
Query: 505 AAARHYITH 513
Y H
Sbjct: 852 RYLSGYGHH 860
>gi|329849390|ref|ZP_08264236.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328841301|gb|EGF90871.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 650
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 65/455 (14%), Positives = 108/455 (23%), Gaps = 30/455 (6%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
G + G D + TS + + T + ++I + +
Sbjct: 161 GEAGADTMQGGDGNDTYIITATSDVVVELENGGYDLVQSTARTTILSANIENLTLMGDPL 220
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G + + G+D L G ++++ +
Sbjct: 221 YHQEGTGNALGNILMSAHSGSSVLRGGAGNDTYYL---NGNFDFVEEEAGEGYDVIYSTA 277
Query: 259 NMTIAQ---------HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++TIA T S+ G+S +V+IGNS NN+F G D +G G D Y
Sbjct: 278 SVTIAGQYVERVELTGTANTSINGNSIRNVMIGNSGNNIFSGWGGGDYIEGGLGND--VY 335
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASY 368
Y + +E D VE L I+ + L
Sbjct: 336 YIWDVRDTVVERAGEGTDTIYSEVSYDLAGRHVEVLNLGRGAINGTGNSLANTLRGGDGN 395
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
L + G D + G D G D ++ Y
Sbjct: 396 NILNGLGGHDRLDGFGGADTLIGGTGNDTY--VVDGSDDVVTELPGEGRDLVQSSFSYSL 453
Query: 429 HGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCE----EGRFVT 482
E A+ L + +G D + E
Sbjct: 454 GAGLEDLTLTGMDAINGTGDDLGNVLTGNSGNNILSGGLGDDTYYIQNTGDNVVEVNGQG 513
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
D+ +Y + + G + L
Sbjct: 514 TDTIYSSVTYALTGRYVEILTLTGSANLNATGNSFANTLIGND------GNNRLNGKAGS 567
Query: 543 APDLVQAGKDHFSNFGYEEGRSI-TFNPDLYLTSY 576
G D F I FN +
Sbjct: 568 DILEGGLGSDTFLFEAGSGADVIRDFNASQNDSIN 602
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 54/381 (14%), Positives = 107/381 (28%), Gaps = 19/381 (4%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-------VKNYI 243
V+ ++ + L + + + + GDD + G
Sbjct: 55 VENLWLSGDAVLTGRGNALNNILTGNNTVNYLLGGLGDDTYYIQNSGDMVEEAHHQGTDT 114
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+T S+S G +N I V G+S +++++GN+ +N+F +G D G G
Sbjct: 115 IYSTVSYSLFGRAVENF-IMLGDDDLVVWGNSLDNLLVGNTGDNLFQGEAGADTMQGGDG 173
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI----DSVNVKQR 359
DT+ A S + + + +++E L + + N
Sbjct: 174 NDTYIITATSD-VVVELENGGYDLVQSTARTTILSANIENLTLMGDPLYHQEGTGNALGN 232
Query: 360 SILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
++ + L G D F E EG D+ + + + + V +
Sbjct: 233 ILMSAHSGSSVLRGGAGNDTYYLNGNFDFVEEEAGEGYDVIYSTASVTIAGQYVERVELT 292
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
A + ++ ++ + D I E
Sbjct: 293 GT--ANTSINGNSIRNVMIGNSGNNIFSGWGGGDYIEGGLGNDVYYIWDVRDTVVERAGE 350
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
G + Y + + A R D L + H+ L
Sbjct: 351 GTDTIYSEVSYDLAG--RHVEVLNLGRGAINGTGNSLANTLRGGDGNNILNGLGGHDRLD 408
Query: 538 NAFADAPDLVQAGKDHFSNFG 558
+ G D + G
Sbjct: 409 GFGGADTLIGGTGNDTYVVDG 429
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/299 (12%), Positives = 77/299 (25%), Gaps = 39/299 (13%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E + N T R + D G T++
Sbjct: 368 VEVLNLGRGAINGTGNSLANTLRGGDGNNILNGLGGHDRLDGFGGADTLIGGTGND---- 423
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
Y D V ++ +SF Y + D+
Sbjct: 424 ---------------------TYVVDGSDDVVTELPGEGRDLVQSSFSYSLGAGLEDLT- 461
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ G + + + + GDD + G ++ +
Sbjct: 462 ---LTGMDAINGTGDDLG--NVLTGNSGNNILSGGLGDDTYYIQNTGDNVVEVN-GQGTD 515
Query: 251 SSIGGYEKNMTIAQ-------HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ +T + + G+S + +IGN NN +G+D+ +G G
Sbjct: 516 TIYSSVTYALTGRYVEILTLTGSANLNATGNSFANTLIGNDGNNRLNGKAGSDILEGGLG 575
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
DTF + A S I F + ++ + + + +++
Sbjct: 576 SDTFLFEAGSGADVIRDFNASQNDSINLNAYTGGIASDSSVAQSGTDVIITLAGGGNVI 634
>gi|147673063|ref|YP_001217005.1| RTX protein [Vibrio cholerae O395]
gi|262169257|ref|ZP_06036949.1| RTX protein [Vibrio cholerae RC27]
gi|146314946|gb|ABQ19485.1| RTX protein [Vibrio cholerae O395]
gi|262022070|gb|EEY40779.1| RTX protein [Vibrio cholerae RC27]
Length = 2648
Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 56/222 (25%), Gaps = 18/222 (8%)
Query: 230 LLDL---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + I+++ +++ G + A + G G+DV +
Sbjct: 2269 TFDFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKS 2328
Query: 287 NVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N+F GND + G G DT A + + + D
Sbjct: 2329 NIFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDT 2387
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
S + + + + + + G D ++ G D+
Sbjct: 2388 GSGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDV 2447
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 2448 VK-----LMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 2484
Score = 43.2 bits (100), Expect = 0.12, Method: Composition-based stats.
Identities = 36/319 (11%), Positives = 74/319 (23%), Gaps = 70/319 (21%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
DI N + + + + +G + I
Sbjct: 2281 GDGDINISLGNYNF----NWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKSNI------ 2330
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G N + G +N +M D+ + A D +
Sbjct: 2331 FTGGEGNDMGVLMGREN----------MMFGGDGNDTAVVAGRINHVFLGAGDDQS---- 2376
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
++ + + SG + +D +S
Sbjct: 2377 ----------FVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQD-----------YSVTI 2415
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLD 305
G + + ++ G+ N +GNDV +G G D
Sbjct: 2416 GNNNQVELGAGNDFANIFGNY-----------NRINAGAGNDVVKLMGYHAVLNGGDGDD 2464
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRS 360
A S + E ++ +DV+ + ID + +
Sbjct: 2465 HLIATAISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNI 2524
Query: 361 ILEYTASYEDLIQVIGQDV 379
+ + + G D+
Sbjct: 2525 VFNGIDWQKLWFERSGYDL 2543
>gi|239908059|ref|YP_002954800.1| hypothetical protein DMR_34230 [Desulfovibrio magneticus RS-1]
gi|239797925|dbj|BAH76914.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 248
Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 51/197 (25%), Gaps = 35/197 (17%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
+ F+ + D LN Q R + LTF ET+ +
Sbjct: 36 SSGLTVTYGFMTTPLGPNDADFTALDFAPLNVTQQAAVRLIYATSQSLTGLTFVETADAA 95
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKAD-------------------VWRYGIGKGT 118
YF + D G+
Sbjct: 96 SADIAFGTMDIAGPSTMAITYFDAVTGTTDDGSPIFDLKDYVYLDNAEWRATLADPVPGS 155
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
+ LHEIGH LGL Y D+ +VMSY +
Sbjct: 156 LGYETILHEIGHTLGLD--------DTAYTRSLPALLDNTDFTVMSYTE--------TDT 199
Query: 179 YCATPMVSDIVAVQKIY 195
Y A V D+ A+ +Y
Sbjct: 200 YKANFSVLDVAALHYLY 216
>gi|99078350|ref|YP_611608.1| hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
gi|99035488|gb|ABF62346.1| Hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
Length = 491
Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/228 (12%), Positives = 58/228 (25%), Gaps = 10/228 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + N + + G N + + ++G G+D + G S N+
Sbjct: 150 DDDIYLYDGNDVAYGGAGNDLLHGGRGNDALYGGIGNDFIIGDVGSDTIDGGSGNDRLQG 209
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GND+ +G G D + + + D + E
Sbjct: 210 GRGNDMINGGDGNDRILGEEGRDVVR----AGDGDDFIEGGDDNDLMWGDE------GRD 259
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ + + L +G D E +G D+ DL
Sbjct: 260 TMLGGDGDDQVFGGIGNDLLQGGLGNDHMEGGGGADVLVGDQGNDLINGGSGNDMMTGDL 319
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
N + G R + + ++ + +
Sbjct: 320 GNDELNGGTGNDTMEGGAGNDIMRGGEGSDFIYGDGGNDYIQGGGGND 367
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/304 (13%), Positives = 73/304 (24%), Gaps = 29/304 (9%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D ++ D +G TI + + G
Sbjct: 157 DGNDVAYGGAGNDLLHGGRGNDALYGGIGNDFIIGDVGSDTIDGGSGNDRLQGGRGNDMI 216
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+G + G + + + +M G M+ Q G
Sbjct: 217 NGGDGNDRILGEEGRDVVRAGDGDDFIEGGDDNDLMWGDEGRDT--MLGGDGDDQVFGGI 274
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + GG D+L +G N + + G
Sbjct: 275 -----------GNDLLQGGLGNDHMEGGGGADVL----VGDQGNDLINGGSGNDMMTGDL 319
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + T +++ G +GND++ G ++ + GND G G D + S
Sbjct: 320 GNDELNGGTGNDTMEGGAGNDIMRGGEGSDFIYGDGGNDYIQGGGGNDHIYGGTNSA--- 376
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
I Y D F D + + Q G
Sbjct: 377 -----GDIGDYLFGGEGYDLF----YFDFGDSGANGGPRDVIQDFSAGGGDLMVFQGFGA 427
Query: 378 DVFE 381
+
Sbjct: 428 TTWR 431
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 44/369 (11%), Positives = 88/369 (23%), Gaps = 63/369 (17%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + G + + + + G + ++ + +L + + G
Sbjct: 57 TETNDGRDTGGSDTPDRGDDRDPDRGGNDGPPSMSVSANIFTRFDTNLAEPGFLTPGLAN 116
Query: 258 KNMTIAQHTVIES-----VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ I+ G+ G D G ++ + GNDV G +G D +
Sbjct: 117 GLNITPGNIWIDWNGENAFEGTHGVDKAWGLWGDDDIYLYDGNDVAYGGAGND--LLHGG 174
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+Y + ++ + + L
Sbjct: 175 RGNDALYGGIGNDFIIGD--------------------------VGSDTIDGGSGNDRLQ 208
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D+ EGRD+ +R G D
Sbjct: 209 GGRGNDMINGGDGNDRILGEEGRDV-------------VRAGDGDDFIEGGDDNDLMWGD 255
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
EGR + + + + +G DH G +
Sbjct: 256 EGR-----DTMLGGDGDDQVFGGIGNDLLQGGLGNDHMEGGGGADVLVGD--------QG 302
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+DL N + G E +E A ++ + G D
Sbjct: 303 NDLINGGSGNDMMT----GDLGNDELNGGTGNDTMEGGAGNDIMRGGEGSDFIYGDGGND 358
Query: 553 HFSNFGYEE 561
+ G +
Sbjct: 359 YIQGGGGND 367
>gi|326680219|ref|XP_001924042.3| PREDICTED: matrix metalloproteinase-15 [Danio rerio]
Length = 623
Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 52/202 (25%), Gaps = 55/202 (27%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L W+ + Y + E R A W KV L FEE
Sbjct: 114 LTGHKWNQNNLTYSIQNHSPKVG-------QQQTYEAIRKAFRVWEKVTPLQFEEVPYHK 166
Query: 74 ----SIHSDIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGI 114
S DI + + + P + D+
Sbjct: 167 IKNGSEGPDIILLFASGYHGDMSLFDGEGGSLAHAFFPGPGMGGDTHFDTDEPWTLNQQE 226
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G G L A+HE+GHALGL H P + Y+
Sbjct: 227 GSGVDLFLVAVHELGHALGLEHS-----NNPSAIMAPFYQWMDTE--------------- 266
Query: 175 ASFGYCATPMVSDIVAVQKIYG 196
DI + +IYG
Sbjct: 267 -----SFALADDDINGIHQIYG 283
>gi|291237328|ref|XP_002738587.1| PREDICTED: matrix metalloproteinase 19 isoform rasi-1
preproprotein-like [Saccoglossus kowalevskii]
Length = 525
Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 55/246 (22%), Positives = 83/246 (33%), Gaps = 50/246 (20%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETS 74
+ ++ WS + YK T L + A W+ V LTF E +
Sbjct: 134 YTIQGSKWSKTDLTYKFYSYTNQ--------LTHGQVRSAIYRAFQLWADVSPLTFTEVA 185
Query: 75 IH-SDIKFISS----NNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILS 121
+DI + ++GY + + +FD + + +GT L
Sbjct: 186 SGDADINIEFARWTHSDGYAASFDGPGGTLAHAYFPENGDAHFDDDETFTVYSDEGTNLF 245
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH+LGL H S G +Y Y D Y +PQD
Sbjct: 246 IVAAHEFGHSLGLGH--SNTQGALMYPWYQGYVPD--------YQLPQD----------- 284
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
DI+ +Q +YG P S + + + +P T D D TL+G
Sbjct: 285 -----DIMGIQYLYGMPDVSRPDPDEGGDGSKPTNP--DTELPEICTDPFDTTLMGLDGR 337
Query: 242 YIDLNT 247
L
Sbjct: 338 TYALRG 343
>gi|229511357|ref|ZP_04400836.1| autotransporter adhesin [Vibrio cholerae B33]
gi|229518475|ref|ZP_04407919.1| autotransporter adhesin [Vibrio cholerae RC9]
gi|229607977|ref|YP_002878625.1| autotransporter adhesin [Vibrio cholerae MJ-1236]
gi|229345190|gb|EEO10164.1| autotransporter adhesin [Vibrio cholerae RC9]
gi|229351322|gb|EEO16263.1| autotransporter adhesin [Vibrio cholerae B33]
gi|229370632|gb|ACQ61055.1| autotransporter adhesin [Vibrio cholerae MJ-1236]
Length = 2630
Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 56/222 (25%), Gaps = 18/222 (8%)
Query: 230 LLDL---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + I+++ +++ G + A + G G+DV +
Sbjct: 2251 TFDFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKS 2310
Query: 287 NVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N+F GND + G G DT A + + + D
Sbjct: 2311 NIFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDT 2369
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
S + + + + + + G D ++ G D+
Sbjct: 2370 GSGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDV 2429
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 2430 VK-----LMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 2466
Score = 43.2 bits (100), Expect = 0.12, Method: Composition-based stats.
Identities = 36/319 (11%), Positives = 74/319 (23%), Gaps = 70/319 (21%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
DI N + + + + +G + I
Sbjct: 2263 GDGDINISLGNYNF----NWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKSNI------ 2312
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G N + G +N +M D+ + A D +
Sbjct: 2313 FTGGEGNDMGVLMGREN----------MMFGGDGNDTAVVAGRINHVFLGAGDDQS---- 2358
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
++ + + SG + +D +S
Sbjct: 2359 ----------FVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQD-----------YSVTI 2397
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLD 305
G + + ++ G+ N +GNDV +G G D
Sbjct: 2398 GNNNQVELGAGNDFANIFGNY-----------NRINAGAGNDVVKLMGYHAVLNGGDGDD 2446
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRS 360
A S + E ++ +DV+ + ID + +
Sbjct: 2447 HLIATAISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNI 2506
Query: 361 ILEYTASYEDLIQVIGQDV 379
+ + + G D+
Sbjct: 2507 VFNGIDWQKLWFERSGYDL 2525
>gi|75909848|ref|YP_324144.1| Na-Ca exchanger/integrin-beta4 [Anabaena variabilis ATCC 29413]
gi|75703573|gb|ABA23249.1| Na-Ca exchanger/integrin-beta4 [Anabaena variabilis ATCC 29413]
Length = 1180
Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + +++ G +GNDV+ G ++ F +GND F G +G D Y
Sbjct: 562 IDGTNFADQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGAGNDTFYGGAGNDIAVYSGT 621
Query: 313 SYLYKIYRFEN--AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
Y++ + AN D L +VE+++F+DQ I N L
Sbjct: 622 RSQYQVTSSGGVFTVTDTVANRDGVDTLREVEQIQFSDQTITIGNTSPTITL 673
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/339 (14%), Positives = 88/339 (25%), Gaps = 43/339 (12%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N ++ + + + G +GND + G N+ G+D G +G D F +
Sbjct: 4 ISGTNGNDNLSGTSGDDIIQGFNGNDTLSGLGGNDRLEGGRGDDTLTGGAGNDVFNFEQL 63
Query: 313 SYLYKIYRF------------------------------ENAIIVYDANEHKQDFLSDVE 342
+ F I + + + L ++
Sbjct: 64 QDNDVVTDFVRGQDKIDVRNLNINDWATLQLLISNDGQDNALITTFSSGSQSRIKLLNIN 123
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD----IT 398
V +E T + L +G D +G D
Sbjct: 124 PNLLQASDFIFNTVNLNQTIEGTNFADQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGR 183
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK---EGRNPDAFKALEYIASHEDLINA 455
D Y G+ +D+ N+ ++ K N + + L+ + S++ NA
Sbjct: 184 GDDTFYGGAGNDVFNLEQLQDNDVVIDFVRGQDKIDVRNLNINDWATLQLLISNDGQDNA 243
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ N + F N A + + G
Sbjct: 244 LITTFSSGSQSQIKLLNINPNLLQASDFI------FNTVNLNQTIDGTNFADQLFGGLGN 297
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
R + L + D AG D F
Sbjct: 298 DTLRGFNGNDVLFGEQGDDRFEGGRGDDTFYGGAGNDVF 336
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/358 (13%), Positives = 92/358 (25%), Gaps = 41/358 (11%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
++I +I G + +++ G +GNDV+ G ++ F G+D
Sbjct: 267 QASDFIFNTVNLNQTIDGTNFADQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGRGDDT 326
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRF------------------------------ENAIIV 327
F G +G D F + F I
Sbjct: 327 FYGGAGNDVFNLEQLQDNDVVIDFVRGQDKIDVRNLNINDWTTLQLLISNDGQDNALITT 386
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + L ++ V +E T + L +G D
Sbjct: 387 FFNGSQSRIKLLNINPNLLQASDFIFNTVNLNQTIEGTNFADQLFGGLGNDTLRGFNGND 446
Query: 388 EFGLSEGRD----ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG---RNPDAF 440
+G D D Y G+ +D+ N+ ++ K N +
Sbjct: 447 VLFGEQGDDRFEGGRGDDTFYSGAGNDVFNLEQLQDNDVVIDFVRGQDKIDLRSLNISDW 506
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
L+ + S++ NA + +N + F + N
Sbjct: 507 STLQTLISNDGQNNALITTFFNGSQSQIKLNNINPNLLQASDF----IFNTNTVNNNETI 562
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
A + + G R + L + + AG D G
Sbjct: 563 DGTNFADQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGAGNDTFYGGAGNDIAVYSG 620
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 62/184 (33%), Gaps = 24/184 (13%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG---- 254
G GN+ Y T +GG D +D + ++L + ++
Sbjct: 947 SGGAGNDTYAFVANAALGTDTITETATGGIDTIDFSG-STGAVRVNLGVTTSQTVNSNLK 1005
Query: 255 -------------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
G N + + + + G +GND + G + N+ + G+D+ G
Sbjct: 1006 LILSANNVIENATGGTGNDRLTGNALNNILAGGNGNDQLQGLAGNDTLWGGLGDDILTGG 1065
Query: 302 SGLDTF------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+G D + + + + I +F+ ++ + +++ D + S +
Sbjct: 1066 AGQDKYLFQSSGVFSSSLGVDYISQFDVGQDQIVLSKATFNAVTNSAGQALTDFAVVSDD 1125
Query: 356 VKQR 359
Sbjct: 1126 EFVN 1129
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 63/386 (16%), Positives = 110/386 (28%), Gaps = 59/386 (15%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYI-------DLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
I + G D+ L T G ++ I +L S N TI + + G
Sbjct: 96 ISNDGQDNALITTFSSGSQSRIKLLNINPNLLQASDFIFNTVNLNQTIEGTNFADQLFGG 155
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD----- 329
GND + G + N+V F G+D F+G G DTF+ A + ++ + + ++ +V D
Sbjct: 156 LGNDTLRGFNGNDVLFGEQGDDRFEGGRGDDTFYGGAGNDVFNLEQLQDNDVVIDFVRGQ 215
Query: 330 ----------------------------------ANEHKQDFLSDVERLRFADQCIDSVN 355
+ Q L ++
Sbjct: 216 DKIDVRNLNINDWATLQLLISNDGQDNALITTFSSGSQSQIKLLNINPNLLQASDFIFNT 275
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD----ITFDSYLYLGSYDDL 411
V ++ T + L +G D +G D D Y G+ +D+
Sbjct: 276 VNLNQTIDGTNFADQLFGGLGNDTLRGFNGNDVLFGEQGDDRFEGGRGDDTFYGGAGNDV 335
Query: 412 RNVFGSDRGAAARHYITHGVK---EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
N+ ++ K N + + L+ + S++ NA +
Sbjct: 336 FNLEQLQDNDVVIDFVRGQDKIDVRNLNINDWTTLQLLISNDGQDNALITTFFNGSQSRI 395
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
N + F N A + + G R + L
Sbjct: 396 KLLNINPNLLQASDFI------FNTVNLNQTIEGTNFADQLFGGLGNDTLRGFNGNDVLF 449
Query: 529 YIASHEDLINAFADAPDLVQAGKDHF 554
+ D AG D F
Sbjct: 450 GEQGDDRFEGGRGDDTFYSGAGNDVF 475
>gi|119485710|ref|ZP_01619985.1| hypothetical protein L8106_25045 [Lyngbya sp. PCC 8106]
gi|119457035|gb|EAW38162.1| hypothetical protein L8106_25045 [Lyngbya sp. PCC 8106]
Length = 518
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/304 (14%), Positives = 72/304 (23%), Gaps = 27/304 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+I+ G D L + + GG + L ++ G N TI
Sbjct: 128 TYNDSMTGGTGNDSIFGEQGFDTLEGGNGNDFIRGGSGDDQILGENDDDNLIGDSGNDTI 187
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++ G SG+D + G + SG+D G D I +
Sbjct: 188 DGGQGDDNISGVSGDDSISGGFGEDTVDGGSGDDWIFGGGDDDVLNGGINVGQDTIEAGD 247
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
V D + ++ + + D +
Sbjct: 248 GNDFVDGG-----------------DGSDNLSGDLGDDTMKGGGGRDSMYGGRDDDALDG 290
Query: 383 MKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
E +GRD F D+ D + G D + T G +
Sbjct: 291 DSGNDEMFGGDGRDTVFGDTGNDTVDGGDDQDLVVGSSGDDSVSGGSGDDTVAGGSGEDI 350
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
I + D P K EE D+ D
Sbjct: 351 LVGGTDNDILIGGGSLLTDEDPPVADMDNKQDIFKITGEEVGGFGNDTIKGFEKNLDKIE 410
Query: 498 VFGS 501
Sbjct: 411 FGFD 414
Score = 41.7 bits (96), Expect = 0.43, Method: Composition-based stats.
Identities = 43/333 (12%), Positives = 80/333 (24%), Gaps = 54/333 (16%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLDTFFYYAPSYLYKIYR 320
+V G+SGND ++G+S + +GND G SG DT S ++Y
Sbjct: 3 NVTGTSGNDFLLGSSNEDYIRGLAGNDRIFALGDNDRVYGGSGNDTV--SGGSGNDRMYG 60
Query: 321 FENAIIVYDANEHKQDFLS-------------------DVERLRFADQCIDSVNVKQRSI 361
L+ F Q +
Sbjct: 61 DTTGSSGVLLPPVLTSGLTSRSNTSTEEFSSLTSLTPQSFTAFEFTPQSTVATQEFVFDA 120
Query: 362 L---EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-------------TFDSYLYL 405
+ + G D + F G D D L
Sbjct: 121 KFFEFLITYNDSMTGGTGNDSIFGEQGFDTLEGGNGNDFIRGGSGDDQILGENDDDNLIG 180
Query: 406 GSYDDLRNVFGSD----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
S +D + D + ++ + + + +D++N +
Sbjct: 181 DSGNDTIDGGQGDDNISGVSGDDSISGGFGEDTVDGGSGDDWIFGGGDDDVLNGGINVGQ 240
Query: 462 LVQVGKD--HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
D F + G + +++G A G E
Sbjct: 241 DTIEAGDGNDFVDGGDGSDNLSGDLGDDTMKGGGGRDSMYGGRDDDALD--GDSGNDEMF 298
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D + ++ + + +G D
Sbjct: 299 GGDGRDTVFGDTGNDTVDGGDDQDLVVGSSGDD 331
>gi|229504974|ref|ZP_04394484.1| RTX protein [Vibrio cholerae BX 330286]
gi|229357197|gb|EEO22114.1| RTX protein [Vibrio cholerae BX 330286]
Length = 2630
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 56/222 (25%), Gaps = 18/222 (8%)
Query: 230 LLDL---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + I+++ +++ G + A + G G+DV +
Sbjct: 2251 TFDFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKS 2310
Query: 287 NVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N+F GND + G G DT A + + + D
Sbjct: 2311 NIFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDT 2369
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
S + + + + + + G D ++ G D+
Sbjct: 2370 GSGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDV 2429
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 2430 VK-----LMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 2466
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 36/319 (11%), Positives = 74/319 (23%), Gaps = 70/319 (21%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
DI N + + + + +G + I
Sbjct: 2263 GDGDINISLGNYNF----NWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKSNI------ 2312
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G N + G +N +M D+ + A D +
Sbjct: 2313 FTGGEGNDMGVLMGREN----------MMFGGDGNDTAVVAGRINHVFLGAGDDQS---- 2358
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
++ + + SG + +D +S
Sbjct: 2359 ----------FVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQD-----------YSVTI 2397
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLD 305
G + + ++ G+ N +GNDV +G G D
Sbjct: 2398 GNNNQVELGAGNDFANIFGNY-----------NRINAGAGNDVVKLMGYHAVLNGGDGDD 2446
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRS 360
A S + E ++ +DV+ + ID + +
Sbjct: 2447 HLIATAISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNI 2506
Query: 361 ILEYTASYEDLIQVIGQDV 379
+ + + G D+
Sbjct: 2507 VFNGIDWQKLWFERSGYDL 2525
>gi|283852348|ref|ZP_06369619.1| hypothetical protein DFW101DRAFT_2189 [Desulfovibrio sp. FW1012B]
gi|283572305|gb|EFC20294.1| hypothetical protein DFW101DRAFT_2189 [Desulfovibrio sp. FW1012B]
Length = 368
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 58/161 (36%), Gaps = 15/161 (9%)
Query: 43 DITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF----ISSNNGYVCTPRYDSRY 98
N N + A AL E SK+ +TF ET+ + N ++
Sbjct: 206 QFAGFNQNQKAGAVEALTELSKITGITFVETTDANLANIYMFGSDIGNDVAGLADAGTQR 265
Query: 99 F-MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
+ + + + + GT HE+GHAL + HP V D+
Sbjct: 266 YKITVAVNSTYSTTADLRSGTGDHELIEHELGHALDMKHPFQG-------SVQLPTAQDN 318
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+VMSY P D+ S + DI A+Q +YG
Sbjct: 319 NNYTVMSYTAPSDTWYSVS---SSIYGPYDIAALQYMYGTD 356
>gi|291570127|dbj|BAI92399.1| peptidyl-prolyl cis-trans isomerase [Arthrospira platensis NIES-39]
Length = 443
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 43/115 (37%), Gaps = 4/115 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
S I + G+D + GG + + + + G + N I +
Sbjct: 255 GGNDLVIGSEIADVINGNQGNDTI----YGGAGDDLIWGGQGDDLLFGNDGNDIINGNRG 310
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++ G +G+D + G ++ +GND+ G G DT + + + +
Sbjct: 311 NDTIYGGAGDDFIRGGQGDDYLSGDAGNDILIGDLGADTLVGGQGADTFVLTHAD 365
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 55/147 (37%), Gaps = 13/147 (8%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G N + + +E I G + N TI + + G G+D++ GN N++ + GN
Sbjct: 252 FAGGGNDLVIGSEIADVINGNQGNDTIYGGAGDDLIWGGQGDDLLFGNDGNDIINGNRGN 311
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-----VERLRFADQC 350
D G +G D F + I+ + D L L AD
Sbjct: 312 DTIYGGAGDD--FIRGGQGDDYLSGDAGNDILI--GDLGADTLVGGQGADTFVLTHADAT 367
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQ 377
ID IL++ + D I V+G
Sbjct: 368 IDQA----DLILDFNLAEGDRIAVVGD 390
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 40/137 (29%), Gaps = 28/137 (20%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N + + + + G+ GND + G + +++ + G+D+ G+ G D
Sbjct: 251 VFAGGGNDLVIGSEIADVINGNQGNDTIYGGAGDDLIWGGQGDDLLFGNDGNDII--NGN 308
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
IY + + L A + LI
Sbjct: 309 RGNDTIYGGAGDDFIR--------------------------GGQGDDYLSGDAGNDILI 342
Query: 373 QVIGQDVFESMKHFYEF 389
+G D + F
Sbjct: 343 GDLGADTLVGGQGADTF 359
Score = 41.3 bits (95), Expect = 0.54, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 30/117 (25%), Gaps = 4/117 (3%)
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
Y P L E + N + + ++ + + A
Sbjct: 225 YAFPRDLDADNVIEITPEISQQNPKGVFAGGGNDLVIGSEIADVINGNQGNDTIYGGAGD 284
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGA 421
+ + G D+ + G D + D ++ G DD + +
Sbjct: 285 DLIWGGQGDDLLFGNDGNDIINGNRGNDTIYGGAGDDFIRGGQGDDYLSGDAGNDIL 341
>gi|114763217|ref|ZP_01442641.1| putative calcium binding hemolysin protein [Pelagibaca bermudensis
HTCC2601]
gi|114544015|gb|EAU47025.1| putative calcium binding hemolysin protein [Roseovarius sp.
HTCC2601]
Length = 1060
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/253 (13%), Positives = 66/253 (26%), Gaps = 39/253 (15%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
I D + G I I G + + T +
Sbjct: 755 NGNLVAGDAPSRITGGADGDGI----YGNRHGDILSGLGGDDVIEGRNGDDWMFGGTGDD 810
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G G+D++ + N+ +G+D+ +G D Y
Sbjct: 811 KLRGGKGDDLIFAENGNDRLEGGAGHDILLAGAGRD-------------YAVGGGGNDLV 857
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D+L+ +L+ + L G+D + +
Sbjct: 858 YGGAGNDYLNG---------------NSGDDVLDGGRDNDKLYGSSGKDTLDGGHGMDKL 902
Query: 390 GLSEGRDI-TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE--GRNPDAFKALEYI 446
D+ F + +Y ++ V +R + H E G + + EY
Sbjct: 903 KGGLDADVFVFQTSIYARDWE----VVARNRASQRDHDAAVTAAEESGEDAPDAASWEYE 958
Query: 447 ASHEDLINAFADA 459
D + F
Sbjct: 959 FLGADTVIDFLPG 971
Score = 44.0 bits (102), Expect = 0.073, Method: Composition-based stats.
Identities = 48/372 (12%), Positives = 104/372 (27%), Gaps = 30/372 (8%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGG------DDLLDLTLIGGVKNYIDLNTESWSSIGG 255
LG++ Y++ D+ + G Y + +++ ++G
Sbjct: 546 LGDDTYELNGATYIREQADEGVDTVLVRDRVLNKTYRTEDANGNLVYSLFDIDAY-TLGA 604
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+N + TV ++ G++ + + GN+ F+ G+D + G D Y A
Sbjct: 605 NLENAKLYDDTVDVALYGNALGNRLTGNALGTTFYGGLGDDHLELGGGADLVGYRAG--- 661
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + L A+ + ++LE+ A I +
Sbjct: 662 ------DGHDTILSFGSDDTLSLLGTGFASAAEALAAFEQQGRDAVLEFDADNS--ITLR 713
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN-VFGSDRGAAARHYITHGVKEG 434
V E + + + D+ G Y+++ + A G +G
Sbjct: 714 DVTVSELLASNIALPVEDPFDVAAGELEPAGDYEEVSAPKANGNLVAGDAPSRITGGADG 773
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ + L D + G D ++ L +
Sbjct: 774 ------DGIYGNRHGDILSGLGGDDVIEGRNGDDWMFGGTGDDKLRGGKGDDLIFAENGN 827
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
R G+ G + A ++ L D G+D+
Sbjct: 828 DRLEGGAGHDILLA---GAGRDYAVGGGGNDLVYGGAGNDYLNGNSGDDVLDG--GRDND 882
Query: 555 SNFGYEEGRSIT 566
+G ++
Sbjct: 883 KLYGSSGKDTLD 894
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+G+DV+ GN+ +NV + SG D F G +G DTF ++ E I+ D + +
Sbjct: 384 TGDDVLTGNALDNVIYGGSGFDQFTGGAGADTF---------RVIHGEGNKIITDFDPGE 434
Query: 335 QDFLSDVERLRFAD--QCIDSVNVKQRSILEYTASYE 369
D L +E FAD + ++ +Y
Sbjct: 435 GDTLV-LEGFNFADSAAALATLTQVGTDAWLINGAYP 470
>gi|302874787|ref|YP_003843420.1| putative calcium binding hemolysin protein [Clostridium
cellulovorans 743B]
gi|302577644|gb|ADL51656.1| putative calcium binding hemolysin protein [Clostridium
cellulovorans 743B]
Length = 769
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/316 (14%), Positives = 83/316 (26%), Gaps = 28/316 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D D G + + I +G
Sbjct: 478 YGGLGTDKLYGYDGNDYIDGGEGDDNIDGGDGQDTLIGCGGNDYLYGGKSNDIIYGNIGN 537
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H G YG D + Y + +D G DI +
Sbjct: 538 DHIECGEGADKSYGGVGDDTLYGGSGNDSLYGEDGRNYIDGGEGEDILYGGRDI---DIL 594
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG K I G D + + +
Sbjct: 595 YGG----------KGNDIIDGKAGNDYISGGDGVDKITGDVGDDKV----YGENGNDYLY 640
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N ++ + + G GND++ G N+ + G+D+ G G D +
Sbjct: 641 GKTGNDSLYGGIGEDQLYGDEGNDIIYGEVGNDKLYGGLGDDLLYGGEGTDVIVGGEGND 700
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+Y + A + + D V++L F+D V ++ + I++
Sbjct: 701 IYVFAKGNGADTIINNTSSNID----VDKLLFSD-------VSLSETKFLKSNKDLKIKI 749
Query: 375 IGQDVFESMKHFYEFG 390
G ++ ++ +G
Sbjct: 750 NGTSEVITISGYFNYG 765
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 48/314 (15%), Positives = 80/314 (25%), Gaps = 30/314 (9%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + +++ G G+DV+ G ++ GND G G D + K+Y +
Sbjct: 432 IKGNAKADTLYGGEGDDVIYGGKGDDFIDGKGGNDSIFGEEGADKLY--GGLGTDKLYGY 489
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + D + L S + + IG D E
Sbjct: 490 DGNDYIDGGEGDDNIDGG--------DGQDTLIGCGGNDYLYGGKSNDIIYGNIGNDHIE 541
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG--RNPDA 439
+ + G D Y GS +D R+YI G E
Sbjct: 542 CGEGADKSYGGVGDDTL-----YGGSGNDSLYGEDG------RNYIDGGEGEDILYGGRD 590
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRN 497
L ++ + + G D + ++ D D L
Sbjct: 591 IDILYGGKGNDIIDGKAGNDYISGGDGVDKITGDVGDDKVYGENGNDYLYGKTGNDSLYG 650
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
G D + Y G L + L + G D +
Sbjct: 651 GIGED-----QLYGDEGNDIIYGEVGNDKLYGGLGDDLLYGGEGTDVIVGGEGNDIYVFA 705
Query: 558 GYEEGRSITFNPDL 571
+I N
Sbjct: 706 KGNGADTIINNTSS 719
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 53/339 (15%), Positives = 94/339 (27%), Gaps = 40/339 (11%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
K + T+Y GDD++ G ++ID SI G E + + +
Sbjct: 432 IKGNAKADTLYGGEGDDVIY---GGKGDDFID-GKGGNDSIFGEEGADKLYGGLGTDKLY 487
Query: 273 GSSGND------------------VVIGNSANNVFFESSGNDVFDGSSGLDTFF------ 308
G GND +IG N+ + ND+ G+ G D
Sbjct: 488 GYDGNDYIDGGEGDDNIDGGDGQDTLIGCGGNDYLYGGKSNDIIYGNIGNDHIECGEGAD 547
Query: 309 -YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS-VNVKQRSILEYTA 366
Y +Y +Y + + E + + + ID K I++ A
Sbjct: 548 KSYGGVGDDTLYGGSGNDSLYGEDGRNYIDGGEGEDILYGGRDIDILYGGKGNDIIDGKA 607
Query: 367 SYEDLIQV---------IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ + +G D G D + Y D N
Sbjct: 608 GNDYISGGDGVDKITGDVGDDKVYGENGNDYLYGKTGNDSLYGGIGEDQLYGDEGNDIIY 667
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ Y G + + ++ + A + D + +
Sbjct: 668 GEVGNDKLYGGLGDDLLYGGEGTDVIVGGEGNDIYVFAKGNGADTIINNTSSNIDVDKLL 727
Query: 478 GRFVTFDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGV 515
V+ +L S DL+ G+ Y +G
Sbjct: 728 FSDVSLSETKFLKSNKDLKIKINGTSEVITISGYFNYGK 766
Score = 47.1 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 59/356 (16%), Positives = 98/356 (27%), Gaps = 66/356 (18%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + + + GS +D + GN ++ GND +G G DT+ S
Sbjct: 279 YGQGVVTGYESNDIITGSDLDDKIYGNGGKDILNGLRGNDYLNGGIGNDTYILGLDSGEK 338
Query: 317 KIYRFE--------------------------NAIIVYDANEHKQDFLSD---------- 340
I ++ N + + N +++ +++
Sbjct: 339 TIEDYDETEGNIDTIKFEQGINPEDISFKRTENNLEIKIKNSNEKITITNYFIDVSTENI 398
Query: 341 ---VERLRFADQCIDSVNVKQRSILE---------YTASYEDLIQVIGQDVFESMKHFYE 388
VE++ F I + IL A + L G DV K
Sbjct: 399 KNKVEKIEFFSGVIWDDKTIAKEILRGNEIGKIIKGNAKADTLYGGEGDDVIYGGKGDDF 458
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G D F Y L G D L
Sbjct: 459 IDGKGGNDSIFGEEGADKLYGGLGTDKLYGYDGNDYIDGGEGDDNIDGGDGQDTLIGCGG 518
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF-DSYLYLGSYDDLRNVFGSDRGAAA 507
++ L ++ +G DH + + D LY GS +D S G
Sbjct: 519 NDYLYGGKSNDIIYGNIGNDHIECGEGADKSYGGVGDDTLYGGSGND------SLYGEDG 572
Query: 508 RHYITHGVKE-----GRNPD------AFKALEYIASHEDLINAFADAPDLVQAGKD 552
R+YI G E GR+ D ++ A ++ + G D
Sbjct: 573 RNYIDGGEGEDILYGGRDIDILYGGKGNDIIDGKAGNDYISGGDGVDKITGDVGDD 628
Score = 44.8 bits (104), Expect = 0.052, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 61/202 (30%), Gaps = 42/202 (20%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG--------------- 303
+ + + + G+ GND + G N+ GND + + G
Sbjct: 6 DYQLVGTEKNDVLNGNIGNDTLDGGLGNDQLTGGKGNDKYIFNRGYGKDIIIDNDKTIGN 65
Query: 304 LDTFFYYA--PSYLYKIYRFENAIIVYDANEHKQDFLSD--------VERLRFADQCI-- 351
+DT + + + Y+ N + + + +S+ +E + F+D I
Sbjct: 66 IDTIVFGEGISASELQFYKSGNNLKILIRDTEDSITISNYYYQDSYKIEEICFSDGTIWD 125
Query: 352 ---------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ I+ + + L G D+ +K G D
Sbjct: 126 QKTISIQPIHINGTGVISGYETNDIITGSDFDDQLYGYGGDDILNGLKGNDYLNGGIGND 185
Query: 397 ITFDSYLYLGSYDDLRNVFGSD 418
+ + D + GSD
Sbjct: 186 VYLFNIGSGKEVIDDYDETGSD 207
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 27/225 (12%), Positives = 57/225 (25%), Gaps = 62/225 (27%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
I+ + + + GS +D + G +++ GND +G G D + + S
Sbjct: 137 NGTGVISGYETNDIITGSDFDDQLYGYGGDDILNGLKGNDYLNGGIGNDVYLFNIGSGKE 196
Query: 317 KIYRFENAIIVYDANEHKQ----------------------------------DFLSDVE 342
I ++ D + + + +E
Sbjct: 197 VIDDYDETGSDIDTILFGEKINPIDLQFSRNENNLKIIIRGTEDSIEILNYYNNLNNKIE 256
Query: 343 RLRFADQCI--------------------------DSVNVKQRSILEYTASYEDLIQVIG 376
+++F+D I + + L + G
Sbjct: 257 KIQFSDGTIWDQKTIDSQPIYIYGQGVVTGYESNDIITGSDLDDKIYGNGGKDILNGLRG 316
Query: 377 QDVFESMKHFYEFGLSE--GRDITFDSYLYLGSYDDLRNVFGSDR 419
D + L G D G+ D ++ G +
Sbjct: 317 NDYLNGGIGNDTYILGLDSGEKTIEDYDETEGNIDTIKFEQGINP 361
>gi|126642450|ref|YP_001085434.1| putative hemolysin-type calcium-binding region [Acinetobacter
baumannii ATCC 17978]
gi|126388334|gb|ABO12832.1| Putative Ig protein [Acinetobacter baumannii ATCC 17978]
Length = 442
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/350 (14%), Positives = 92/350 (26%), Gaps = 62/350 (17%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG------GYEKNMTIAQHTVIESVV--- 272
I+D G D ++ + IDLN WS IG ++I T IE+ +
Sbjct: 10 IWDGAGVDTINASNATQA-ATIDLNQGGWSYIGEKSPHISSANQLSINLGTQIENAIGGA 68
Query: 273 ---------------GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YY 310
G +GND + GN ++V +GND DG G D+ YY
Sbjct: 69 YDDILVGNNLSNRLEGGAGNDTLKGNWGDDVLLGGAGNDTLDGGKGADSLIGGTGDDTYY 128
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-------------------I 351
+ I + ++ ++E L
Sbjct: 129 VDNVGDSIVENTSEGNDKVISDINYTLGDNLENLTLNGADNLNGNGNALNNVIIGNAGNN 188
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS---------- 401
+ L A + L G D + G DI +
Sbjct: 189 NLNGYAGNDTLNGGAGNDTLDGGAGNDTLDGGIGIDTLIGGLGDDIYYVDNVNDVIIEKI 248
Query: 402 -YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+ + S + + +G + + + L +
Sbjct: 249 NEGFETVNSTVSYALDSGNALNNLNLLGTDNIDGTGNGNGNTIVGNSGNNILSGGTNNDV 308
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
G D + + S L + +V G + + +
Sbjct: 309 LNGGAGNDILNGGKDNDTLIGGLGSDTALYKLLNTNDVTGGNGADVWKDF 358
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 67/243 (27%), Gaps = 3/243 (1%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
++G++I + + D Y G D L+ + G N + I G N
Sbjct: 130 DNVGDSIVENTSEGNDKVISDINYTLG--DNLENLTLNGADNLNGNGNALNNVIIGNAGN 187
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + +++ G +GND + G + N+ G D G G D ++ + +
Sbjct: 188 NNLNGYAGNDTLNGGAGNDTLDGGAGNDTLDGGIGIDTLIGGLGDDIYYVDNVNDVIIEK 247
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQD 378
E V + D + + L + + + L D
Sbjct: 248 INEGFETVNSTVSYALDSGNALNNLNLLGTDNIDGTGNGNGNTIVGNSGNNILSGGTNND 307
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
V + D + L N G A + V
Sbjct: 308 VLNGGAGNDILNGGKDNDTLIGGLGSDTALYKLLNTNDVTGGNGADVWKDFKVGNTLTDS 367
Query: 439 AFK 441
Sbjct: 368 EAD 370
>gi|27378825|ref|NP_770354.1| hypothetical protein bll3714 [Bradyrhizobium japonicum USDA 110]
gi|27351974|dbj|BAC48979.1| bll3714 [Bradyrhizobium japonicum USDA 110]
Length = 4128
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 61/399 (15%), Positives = 110/399 (27%), Gaps = 18/399 (4%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ + + T F S + F++ + +
Sbjct: 3340 ASIGNDTLRSIEAIQGTNFNDSYDASTFGTAGALNIGNNGTFNQFEGLGGNDTIVGNGNT 3399
Query: 123 NALHEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
++ A +H G G D +S S ++ D+
Sbjct: 3400 RVIYSSAAAGVTIHLAAGTATGDASVGTDTFSGVNSATGSQLADTYDATGFTDSGTFNSG 3459
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
T + + + G GN +I Q + + L +
Sbjct: 3460 TFNLFEGL------GGNDTITGNGNTRIAYAQAAAAVTVDLSLGTAHGTAGGDLANVGTD 3513
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
I T +S+ G N T+ E G G+D + N+ +G D DG
Sbjct: 3514 TI---TGGVNSVQGSNFNDTLIGGGGNELFFGGGGSDTINAGGGNDQITGQAGADTIDGG 3570
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANE---HKQDFLSDVERLRFADQCIDSVNVKQ 358
+G D Y PS Y I I + D L++VE L+F+D +
Sbjct: 3571 AGTDMAIYTGPSSAYTITTLAGGQIQVADSNSARDGTDVLTNVEVLQFSDVTTLLASGTA 3630
Query: 359 RSILE-----YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ ++ A+ L G D + + G G+ L N
Sbjct: 3631 ANPIDISSMGLGANGNALHGTAGDDYLMVGGSSFGHPIDLGAGNDTVILATGGASLTLTN 3690
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
V + G + D ++++ L
Sbjct: 3691 VENVLGSSGDDFISLTNNANGLSIDGGAGNDFVSLANGL 3729
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/427 (12%), Positives = 115/427 (26%), Gaps = 20/427 (4%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
++F + + + T D+ + V S+N
Sbjct: 1754 ISFNNATAGVSVDLQTGATPGTGTATGDASVGTDTFSGVNAVQGSMFDDTIYGSNNTAVT 1813
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ N G + ++ S S + + + T +
Sbjct: 1814 ETFT-----GNAGNDYIDGRGGFDIASYNNIYLSTGSIAVNMAAGIVVGDSSIGTDTLRS 1868
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD--------LTLIGGV 239
I +Q A + ++ GG+D++
Sbjct: 1869 IEGIQGTVNADTYNATGYGAAGAFNVGNNGTFNQFEGLGGNDIITGNGNTRVIYANATAA 1928
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ + G + T + SV GS+ D +IG++ +++F + GND +
Sbjct: 1929 VTVDLSLGTAHGTAAGDLAAIGTDSFTGVFSVTGSAFADTLIGSAGSDMFVGNGGNDQIN 1988
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENA---IIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G +G D Y Y I + A D L++VE L+F + + +
Sbjct: 1989 GGAGGDIAIYSGTKTQYSISTDGAGHATVTDNVAGRDGTDTLTNVEALQFTNGTVLITSG 2048
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ ++ + + + +++G L G+ D +
Sbjct: 2049 SAANPVDLSDTRLYFNAATNPFTSATGSADDYVKINQGLSGHLID-LGAGANDTVILGVT 2107
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ G D F + + + + G + S E
Sbjct: 2108 GGYNLNLANVE---YLVGTAGDDFVGFASNVNGLTIDMGGGNDTVNLANGSNSVSASNIE 2164
Query: 477 EGRFVTF 483
F
Sbjct: 2165 NLNGSDF 2171
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 45/142 (31%), Gaps = 6/142 (4%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L T + G TI + + G G D++ G + N+ ++GND DG +G
Sbjct: 1444 LGTSGNDVLTGTAAIDTIDGREGNDQISGGDGADLLFGGAGNDRIAGNAGNDHIDGGAGF 1503
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR---FADQCIDSVNVKQRSI 361
D Y + I D L ++E + FAD + I
Sbjct: 1504 DRALYTDATGGVTINMAAGTAS---GAGVDSDTLVNIEGIVGSAFADTYDATGFTGVSGI 1560
Query: 362 LEYTASYEDLIQVIGQDVFESM 383
Y + G D
Sbjct: 1561 PGSPIGYNEFEGGGGDDSITGT 1582
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 7/124 (5%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++VG++G+D + G N+ GND DG G D Y + +
Sbjct: 2945 GDASNNNLVGTAGDDTIQGLGGNDKLQGLGGNDTLDGGQGFDRAIYTDATSAITVNLAAG 3004
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQ--CIDSVNVKQRSILEYT-ASYEDLIQVIGQDVF 380
+ D L ++E + +D I++ S + ++ G D
Sbjct: 3005 TVT----GGSGSDTLVNIEAIVGSDFADTINTSGFLGDSGIAGNPLGLNEIEGRGGNDTI 3060
Query: 381 ESMK 384
S
Sbjct: 3061 ISDA 3064
Score = 40.2 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 53/338 (15%), Positives = 86/338 (25%), Gaps = 29/338 (8%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D + N T S +N + + T G+ LGL
Sbjct: 2992 DATSAITVNLAAGTVTGGSGSDTLVNIEAIVGSDFADTINTSGFLGDSGIAGNPLGLNEI 3051
Query: 138 GSYNGGYPVYGVDND-----------YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
G + N + + + + D + T + S
Sbjct: 3052 EGRGGNDTIISDANSQGAPMTRLSYVSAAAAVTVDLAAGTAHGTAAGDTANVGTDTLVGS 3111
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
AV A NN T+ GG D D L + I
Sbjct: 3112 GFAAVIGSAFADTLLGSNNASGTVEIFDGRGGNDTLNGRGGFDRADYALDPATASGI--- 3168
Query: 247 TESWSSIGGYEKNMTIAQHTV--IESVVGSSGNDVVI------------GNSANNVFFES 292
+ + G + TI T+ IES+ G++ D N N F
Sbjct: 3169 -TANMAAGTVTGDSTIGTDTLVSIESIRGTNFVDTYNAVGFSGSGVNPGSNGTFNEFNGM 3227
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
GND G+ F A + ++ ++ F D +
Sbjct: 3228 GGNDSITGNGNTRLAFVNATGGVTVDIAAGTDSGDASTGSDTFSGVNAIQASMFDDTLLG 3287
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
S N A + + G D+ ++ G
Sbjct: 3288 SNNATGTETFTGLAGNDYIDGRGGFDLASYNNIYFSTG 3325
>gi|6678900|ref|NP_032635.1| matrix metalloproteinase-15 precursor [Mus musculus]
gi|12585269|sp|O54732|MMP15_MOUSE RecName: Full=Matrix metalloproteinase-15; Short=MMP-15; AltName:
Full=Membrane-type matrix metalloproteinase 2;
Short=MT-MMP 2; Short=MTMMP2; AltName:
Full=Membrane-type-2 matrix metalloproteinase;
Short=MT2-MMP; Short=MT2MMP; Flags: Precursor
gi|2662366|dbj|BAA23667.1| membrane type-2 matrix metalloproteinase [Mus musculus]
gi|34784408|gb|AAH57952.1| Matrix metallopeptidase 15 [Mus musculus]
gi|55777344|gb|AAH47278.1| Matrix metallopeptidase 15 [Mus musculus]
Length = 657
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 55/164 (33%), Gaps = 31/164 (18%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + W+NY + + T ++ E R A W +V L F+E S
Sbjct: 128 YTLTGKAWNNYHLTFSIQNYTEKLGWYNS-------MEAVRRAFQVWEQVTPLVFQEVSY 180
Query: 76 H---------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWR 111
+DI + ++ + P + D+ +
Sbjct: 181 DDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLAHAYFPGPGLGGDTHFDADEPWTFS 240
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + D +N
Sbjct: 241 STDLHGISLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTDN 284
>gi|308048168|ref|YP_003911734.1| N-acetylgalactosaminyl-proteoglycan3-beta-glucur onosyltransferase
[Ferrimonas balearica DSM 9799]
gi|307630358|gb|ADN74660.1| N-acetylgalactosaminyl-proteoglycan3-beta-glucur onosyltransferase
[Ferrimonas balearica DSM 9799]
Length = 722
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 13/91 (14%)
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLY 572
+ E +N F Y+ + D+ +H+ FG++ GR + F+ Y
Sbjct: 5 ISEIKNSGLFDIDWYLKQYPDVN-------LSGLPPVEHYLKFGWKIGRDPSPHFSTQGY 57
Query: 573 LTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
L+ Y+D+ H+I +G+ EGR
Sbjct: 58 LSHYEDVRQ----SGLNPLAHFIRYGINEGR 84
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 12/82 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL Y D+ HY+ G K GR+P F Y++ +ED+ +
Sbjct: 14 FDIDWYLKQYPDVNLSG----LPPVEHYLKFGWKIGRDPSPHFSTQGYLSHYEDVRQS-G 68
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
P HF +G EGR
Sbjct: 69 LNPL------AHFIRYGINEGR 84
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 12/86 (13%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
FD YL Y D+ HY+ G K GR+P F Y++ +ED+
Sbjct: 10 NSGLFDIDWYLKQYPDVNLS----GLPPVEHYLKFGWKIGRDPSPHFSTQGYLSHYEDVR 65
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGR 479
+ + HF +G EGR
Sbjct: 66 QSGLNP-------LAHFIRYGINEGR 84
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 13/90 (14%)
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYL 489
E +N F Y+ + D+ + +H+ FG + GR + F + YL
Sbjct: 6 SEIKNSGLFDIDWYLKQYPDVNLSGLPP-------VEHYLKFGWKIGRDPSPHFSTQGYL 58
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
Y+D+R + H+I +G+ EGR
Sbjct: 59 SHYEDVRQSGLN----PLAHFIRYGINEGR 84
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 384 KHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
+H+ +FG GRD + F + YL Y+D+R H+I +G+ EGR
Sbjct: 35 EHYLKFGWKIGRDPSPHFSTQGYLSHYEDVRQS----GLNPLAHFIRYGINEGR 84
>gi|192289969|ref|YP_001990574.1| outer membrane adhesin like proteiin [Rhodopseudomonas palustris
TIE-1]
gi|192283718|gb|ACF00099.1| outer membrane adhesin like proteiin [Rhodopseudomonas palustris
TIE-1]
Length = 1712
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/307 (16%), Positives = 87/307 (28%), Gaps = 19/307 (6%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
ET + +G T + I DV R G G TI
Sbjct: 1420 ETVLGGSGNDTLIGDGNANTLVGNVGNDTLIGGGGDDVLRGGAGDDTIDGGAGFD----T 1475
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
L L G + + + F+ + + G + V
Sbjct: 1476 LDLSDATGVVTISFTAGTATGAGIGTDHFTGIESFVLGEGADRVTGG--------NGADV 1527
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
G G + ++ GDD++D GG+ N
Sbjct: 1528 INGGGGNDVIAGG---AGNDKLFGGAGDDSLDGGSGDDVVD----GGIGNDTLKGGSGVD 1580
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G + N I + + + G +GND++ G S ++ +GND+ G SG D F + A
Sbjct: 1581 IISGGDGNDDIDGGSENDILNGGAGNDIIKGGSGADIITGGAGNDILTGGSGADVFVFAA 1640
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ F D + ++ + + + V
Sbjct: 1641 GFGKDIVTDFATKGSSADVLQFSSSMFANFTDVMSHTTQVGNDVVVTLDADNSLTLANTQ 1700
Query: 372 IQVIGQD 378
I + D
Sbjct: 1701 IGSLAAD 1707
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 57/417 (13%), Positives = 109/417 (26%), Gaps = 62/417 (14%)
Query: 212 QQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
D+ F T+ D GG ++T+I + + T + G ++ +A +
Sbjct: 1265 FSGDATFSYTVSDGRGGIATANVTVIVVPQPEPLVGTSGDDVLNGTSRDDVMAAGEGDDE 1324
Query: 271 VVGSSGNDVVIGNSANN------------------VFFESSGNDVFDGSSGLDTFFYYAP 312
V G +GND + G + ++ +G+D+ G +G D
Sbjct: 1325 VFGVAGNDTIDGGAGDDRIDGGDGDDILAGGDGDDELIGGAGSDILVGGAGDDELDGGDG 1384
Query: 313 SYLYKIYRFENAIIVYDAN------EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + ++ E D L ++E + + + L
Sbjct: 1385 HDVADYTADSAGFVADLSSGQAAGDEIGYDSLRNIETVLGGSGNDTLIGDGNANTLVGNV 1444
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDI------TFDSYLYLGSYDDLRNVFGSDRG 420
+ LI G DV G D T + + G+D
Sbjct: 1445 GNDTLIGGGGDDVLRGGAGDDTIDGGAGFDTLDLSDATGVVTISFTAGTATGAGIGTDHF 1504
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
++ + + D+I A L D + G +
Sbjct: 1505 TGIESFVLGEGADRVTGGNGADVINGGGGNDVIAGGAGNDKLFGGAGDDSLDGGSGD--- 1561
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
D D L+ G D + + ++ L
Sbjct: 1562 ---DVVDGGIGNDTLKGGSGVDIISGGDGNDDIDGG--------------SENDILNGGA 1604
Query: 541 ADAPDLVQAGKD-------HFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
+ +G D + G F D+ F + S+A
Sbjct: 1605 GNDIIKGGSGADIITGGAGNDILTGGSGADVFVFAAGFG----KDIVTDFATKGSSA 1657
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 33/92 (35%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ N I + + G+ G+D +IG S ++ G DV G G D
Sbjct: 265 GDDVVRAGAGNDVIYGDAGNDLLFGAGGSDQLIGGSGDDFLDGGEGTDVLTGGVGNDVIV 324
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
++ + + + A+ + D ++
Sbjct: 325 ATGDELIFHAGDGIDLVSLDSASTIRLDGVTS 356
>gi|254502410|ref|ZP_05114561.1| hypothetical protein SADFL11_2449 [Labrenzia alexandrii DFL-11]
gi|222438481|gb|EEE45160.1| hypothetical protein SADFL11_2449 [Labrenzia alexandrii DFL-11]
Length = 806
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 53/147 (36%), Gaps = 27/147 (18%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLI 537
+ F+ YL + D+ + +A H+ G EGR+P+ F Y++ + D+
Sbjct: 2 SIAFNEEYYLANNPDVAAAIDAGLFQSAVEHFNLFGWSEGRDPNENFDTSFYLSENPDVA 61
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSIT------------------FNPDLYLTSYDDL 579
A DHF +G EGR F+ YL + D+
Sbjct: 62 AA-------GVNPLDHFWVYGAAEGRIPNQTIDTLLGQPDIGGGDDAFDSATYLAANPDV 114
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRALG 606
+ A QH++ +G E R
Sbjct: 115 QAAVEAGSFTAYQHWVLYGQFENRDGA 141
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 27/146 (18%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLI 453
I F+ YL + D+ + +A H+ G EGR+P + F Y++ + D+
Sbjct: 2 SIAFNEEYYLANNPDVAAAIDAGLFQSAVEHFNLFGWSEGRDPNENFDTSFYLSENPDVA 61
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVT------------------FDSYLYLGSYDDL 495
A + DHF +G EGR FDS YL + D+
Sbjct: 62 AAGVNP-------LDHFWVYGAAEGRIPNQTIDTLLGQPDIGGGDDAFDSATYLAANPDV 114
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNP 521
+ + A +H++ +G E R+
Sbjct: 115 QAAVEAGSFTAYQHWVLYGQFENRDG 140
>gi|217978121|ref|YP_002362268.1| hypothetical protein Msil_1963 [Methylocella silvestris BL2]
gi|217503497|gb|ACK50906.1| hypothetical protein Msil_1963 [Methylocella silvestris BL2]
Length = 1306
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 59/432 (13%), Positives = 106/432 (24%), Gaps = 51/432 (11%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
+ D S A+ +SD V Y G+ N TI+
Sbjct: 576 NLSYDETTWLSDAITASNALSDWATVLHSYDPSAGTASQNGTNGAETLYGDVTADTIHGF 635
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D + G N I + I G E + + + G GND + G
Sbjct: 636 NGADTI----YGDYGNDILYGDDGNDVIYGDEGADVLYGGAGNDHLYGGDGNDTIHGEYG 691
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS------ 339
N+ +G + +G DTF Y + + +++
Sbjct: 692 NDTLDGGAGGNFLSALTGDDTFVYGGGHDVISDTGGSDQLLLPSGIVLGDLTFQRVSTEG 751
Query: 340 -----------------------------DVERLRFADQCIDSVNVKQRSILEYTASYED 370
+E L F+D + + TA +
Sbjct: 752 SLSYFDDLLINIDGAGTIEIKAHFQSSSFRIETLVFSDTSTLDLTTLANPDVYLTAGNDT 811
Query: 371 LIQV-------IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
G D + M + + D+ D G D +
Sbjct: 812 FTSGATGAFAIYGGDGDDYMSDYQNAAHTFDGGNGNDAMYGGAGNDTYIASTGFDTISEN 871
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
T V D + N L ++ + E
Sbjct: 872 AGTDTIVVPAAFTIDDVTFYRILNGSGPTDNLGISINGLGEIAVIAQFSSALVEYMHFDN 931
Query: 484 DSYLYLGSYDD---LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
D+ S + + + H + + +GR D + + + + I +
Sbjct: 932 DNSTISLSGLSITTVGTAGNDNLSPPSTHAGANDILDGREGDDY--VNGGSGDDTYIFSA 989
Query: 541 ADAPDLVQAGKD 552
+G D
Sbjct: 990 GHDTITESSGDD 1001
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 77/557 (13%), Positives = 134/557 (24%), Gaps = 65/557 (11%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T D + D DV G + + G G + G
Sbjct: 638 ADTIYGDYGNDILYGDDGNDVIYGDEGADVLYGGAGNDHLYGGDGNDTIHGEYGNDTLDG 697
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ + ++ + G + S IV + + S ++
Sbjct: 698 GAGGNFLSALTGDDTFVYGGGHDVISDTGGSDQLLLPSGIVLGDLTF--QRVSTEGSLSY 755
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIG---GVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + TI + + +DL T + + N T
Sbjct: 756 FDDLLINIDGAGTIEIKAHFQSSSFRIETLVFSDTSTLDLTTLANPDVYLTAGNDTFTSG 815
Query: 266 -TVIESVVGSSGNDVVIGN-SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T ++ G G+D + +A + F +GND G +G DT Y A + I
Sbjct: 816 ATGAFAIYGGDGDDYMSDYQNAAHTFDGGNGNDAMYGGAGNDT--YIASTGFDTISENAG 873
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSV----------------------------- 354
+ D ++ L + +
Sbjct: 874 TDTIVVPAAFTIDDVTFYRILNGSGPTDNLGISINGLGEIAVIAQFSSALVEYMHFDNDN 933
Query: 355 -------------NVKQRSILEY----TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
L + + L G D + S G D
Sbjct: 934 STISLSGLSITTVGTAGNDNLSPPSTHAGANDILDGREGDDYVNGGSGDDTYIFSAGHDT 993
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
+S G + +Y + D Y +
Sbjct: 994 ITESSGDDTILVRSSYAPGDISISFVPYYYDTTGMRLEDTDGNSITVYRQGYS-----SG 1048
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR--GAAARHYITHGV 515
+ V N E S YL + D+ + +D G A I G
Sbjct: 1049 YVVEHVAFADTTVWNLSSMEIETHGTSSADYLYGH-DVGDASSADTIYGYAGNDTIDAGD 1107
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTS 575
A AS+ + + D + GK H +G + NP +
Sbjct: 1108 GNDLVYAGDGADYVYASNGNDTVYGGNDADELH-GKFHSVLYGEAGNDDLYANPYSNEAA 1166
Query: 576 YDDLWNVFGSDRSAAAQ 592
L +FG D +
Sbjct: 1167 GT-LVTLFGGDGADTLH 1182
Score = 46.7 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 76/300 (25%), Gaps = 37/300 (12%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ N+ + + + D G G T + I
Sbjct: 948 TAGNDNLSPPSTHAGANDILDGREGDDYVNGGSGDDTYIFSAGHDTIT------------ 995
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ D + SY S+ + Y T M + +
Sbjct: 996 ----------ESSGDDTILVRSSYAPGDISISFVPYYYDTTGMRL------------EDT 1033
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN+I ++ + + ++ + +G T
Sbjct: 1034 DGNSITVYRQGYSSGYVVEHVAFADTTVWNLSSMEIETHGTSSADYLYGHDVGDASSADT 1093
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + +++ GND+V + + S+GND G + D + +Y
Sbjct: 1094 IYGYAGNDTIDAGDGNDLVYAGDGADYVYASNGNDTVYGGNDADEL---HGKFHSVLYGE 1150
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+Y + + V +++ + +I G D F
Sbjct: 1151 AGNDDLYANPYSNEAAGTLVTLFGGDGADTLHGGNYGETVMHGGNGVDTMISAYGTDTFA 1210
>gi|218438228|ref|YP_002376557.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7424]
gi|218170956|gb|ACK69689.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7424]
Length = 1400
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/503 (12%), Positives = 125/503 (24%), Gaps = 29/503 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + N + + D G G TI + + G
Sbjct: 613 DGGEGNDTINGNEDNDSLFGGAGTDTISGNLGDDTIDGGEGNDTINGNEDNDSLFGGAGT 672
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + G + + + + + + +D G D ++
Sbjct: 673 DTISGNLGDDTIDGGEGNDTINGNEDNDSLFGGAGNDTIDGGEGNDTINGNEDNDSLLGG 732
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPF-IQTIYDSGGDDLLDLTLIG----GVKNYIDLNTES 249
G G I +P I+T+ G D + G + +
Sbjct: 733 AGNDSIDGGAGNDTINSNDAANPGEIETLIGGAGADNITGGNGNDSIYGGFSTGAQTGDE 792
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-- 307
SI G N TI + +++ G GND + GN N+ F +GND DG +G DT
Sbjct: 793 ADSINGGAGNDTIFGNLGNDTIDGGEGNDTINGNEDNDSLFGGAGNDSIDGGAGNDTINS 852
Query: 308 ---------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ I +Y + + + +
Sbjct: 853 NDPAVGGTETLIGGAGADNITGGNGNDSIYGGFSTGAQTGDEADSINGGAGNDTIFGNLE 912
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT----FDSYLYLGSYDDLRNV 414
++ + + + G D + G D L G D N
Sbjct: 913 DDTIDGGNNNDRISGNEGNDSLLGGAGNDTIFGNLGNDSIDGGSGTDSLIGGEGGDTLNG 972
Query: 415 FGSDRGAAARHYITHGVKEGR-----NPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
++ ++ + L ++ + + G D
Sbjct: 973 GDTEGDIIYGGFVGNNQNNDEADSINGGAGNDTLYGNLDNDTIDGGNDEDTIYGGEGTDS 1032
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
+ + F G D N + + G + +
Sbjct: 1033 LLGRDGNDSIYGGFSGNNQTGDEADSINGGAGNDTIS----GNLGDDTIDGDNNNDRISG 1088
Query: 530 IASHEDLINAFADAPDLVQAGKD 552
++ L+ +G D
Sbjct: 1089 NEDNDSLLGGAGTDTLFGNSGHD 1111
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 62/454 (13%), Positives = 117/454 (25%), Gaps = 32/454 (7%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ + D G G T++ N I L G
Sbjct: 391 GDAGNDIIFGGRDNDSIDGGTENDSLIGGEGTDTLVGGNGNDTIIGGLQTADQSGDQGDT 450
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
G ND + + D++ +D + G GN
Sbjct: 451 ITGGDGNDSILGNSGVDTLLGDGGNDALFGGRDNDTIDGGENDD-TLVGGEGTDTLVGGN 509
Query: 205 NIY----KIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWS--- 251
++ + + TI G+D + D G K+ I+ N + S
Sbjct: 510 GADSILGGLQSEAQTGDLADTILGGAGNDTISGNLGDDTIDGGDNKDRINGNEGADSLVG 569
Query: 252 -----SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+I G E N TI + +S+ G +G D + GN ++ GND +G+ D+
Sbjct: 570 GAGTDTIDGGEGNDTINGNEDNDSLFGGAGTDTISGNLGDDTIDGGEGNDTINGNEDNDS 629
Query: 307 FF-------YYAPSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQ 358
F I E + ++ F + + + +
Sbjct: 630 LFGGAGTDTISGNLGDDTIDGGEGNDTINGNEDNDSLFGGAGTDTISGNLGDDTIDGGEG 689
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNV 414
+ + L G D + + +E D + + G+ +D N
Sbjct: 690 NDTINGNEDNDSLFGGAGNDTIDGGEGNDTINGNEDNDSLLGGAGNDSIDGGAGNDTINS 749
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
+ I + Y G D
Sbjct: 750 NDAANPGEIETLIGGAGADNITGGNGNDSIYGGFSTGAQTGDEADSINGGAGNDTIFGNL 809
Query: 475 CEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ + + +D ++FG +
Sbjct: 810 GNDTIDGG-EGNDTINGNEDNDSLFGGAGNDSID 842
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 50/353 (14%), Positives = 84/353 (23%), Gaps = 12/353 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
F T+Y S G D + IGG ++ +I G E N I
Sbjct: 83 GNDTVVGGNFNDTLYGSEGFDTIQGGGGDDSIGGGLQTASQTSDLADTIDGGEGNDIIFG 142
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ I+++VG+ GND V G + ND G G DT + +
Sbjct: 143 NLGIDTLVGNIGNDTVFGGRDGDSIDGGLDNDSLVGGEGADTI--TGGTGNDTLVGGLQT 200
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + + IL + L D +
Sbjct: 201 SSQTGDLADNLNGGLGNDVIFGNLGNDTLIGDIGDDILFGGRDNDTLSGGANNDSLVGGE 260
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
EG D DDL + G + G L
Sbjct: 261 GADTITGDEGDDTIRGGLQTASQSDDLADSLNGGLGNDLI-FGNLGNDTLLGDIGDDILF 319
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
++ + + D + + S D N +
Sbjct: 320 GGIDNDSIDGGADQDSLVGGENIDTITGGAGNDTIIGGLQSGDQSNDEADNINGGVGNDS 379
Query: 505 -----AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G +++ ++ LI + G D
Sbjct: 380 ILGNIGVDTLLGDAGNDIIFGGRDNDSIDGGTENDSLIGGEGTDTLVGGNGND 432
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 61/513 (11%), Positives = 112/513 (21%), Gaps = 29/513 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
N T + D G G +I I +
Sbjct: 798 GGAGNDTIFGNLGNDTIDGGEGNDTINGNEDNDSLFGGAGNDSIDGGAGNDTINSNDPAV 857
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + + S D+ G + + I
Sbjct: 858 GGTETLIGGAGADNITGGNGNDSIYGGFSTGAQTGDEADSINGGAGNDTIFGNLEDDTID 917
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + TI+ + G+D +D G + + + GG
Sbjct: 918 GGNNNDRISGNEG-NDSLLGGAGNDTIFGNLGNDSID---GGSGTDSLIGGEGGDTLNGG 973
Query: 256 YEKNMTIAQHTV--------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ I V +S+ G +GND + GN N+ + D G G D+
Sbjct: 974 DTEGDIIYGGFVGNNQNNDEADSINGGAGNDTLYGNLDNDTIDGGNDEDTIYGGEGTDSL 1033
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
IY + + + + + +
Sbjct: 1034 L--GRDGNDSIYGGFSGNNQTGDEADSINGGAGNDTISGNLGDDTIDGDNNNDRISGNED 1091
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAA 422
+ L+ G D E D D L D L G D
Sbjct: 1092 NDSLLGGAGTDTLFGNSGHDTIDGGEDNDTINGNQDRDKLLGGAGGDSLVGDTGDDTIYG 1151
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
T D A + + + + D + G +
Sbjct: 1152 GFSGDTQTGDLADTIDGGTANDLLFGNLGNDSIVGGTGDDIIYGNEDGDTLLGGNNNDTI 1211
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
+ + DL + ++ ++ LI
Sbjct: 1212 YGGFSGDTQAGDLADTIDGGIANDILFGNL----------GNDSIVGGTGNDTLIGGSGA 1261
Query: 543 APDLVQAGKDHFSNFGYEEGRSITFNPDLYLTS 575
+ DHF + + T + + +
Sbjct: 1262 DTLTGGSNNDHFRYLAASDSNNSTVDRIIDFAN 1294
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 61/496 (12%), Positives = 115/496 (23%), Gaps = 26/496 (5%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ +S D+ + + I D+ G T+ +
Sbjct: 199 QTSSQTGDLADNLNGGLGNDVIFGNLGNDTLIGDIGDDILFGGRDNDTLSGGANNDSLVG 258
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G G + G L ++ + D + ++ DI
Sbjct: 259 GEGADTITGDEGDDTIRGGLQTASQSDDLADSLNGGLGNDLIFGNLGN---DTLLGDIGD 315
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK---------- 240
G S+ + I TI G+D + L G +
Sbjct: 316 DILFGGIDNDSIDGGADQ--DSLVGGENIDTITGGAGNDTIIGGLQSGDQSNDEADNING 373
Query: 241 ---NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
N L ++ G N I +S+ G + ND +IG + +GND
Sbjct: 374 GVGNDSILGNIGVDTLLGDAGNDIIFGGRDNDSIDGGTENDSLIGGEGTDTLVGGNGNDT 433
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G + I + + + F + D+++
Sbjct: 434 IIGGL---QTADQSGDQGDTITGGDGNDSILGNSGVDTLLGDGGNDALFGGRDNDTIDGG 490
Query: 358 Q-RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ L + L+ G D I + S +
Sbjct: 491 ENDDTLVGGEGTDTLVGGNGADSILGGLQSEAQTGDLADTILGGAGNDTISGN--LGDDT 548
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
D G + + A D IN D L +
Sbjct: 549 IDGGDNKDRINGNEGADSLVGGAGTDTIDGGEGNDTINGNEDNDSLFGGAGTDTISGNLG 608
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ + + +D ++FG G + + ++ L
Sbjct: 609 DDTIDGGEGNDTINGNEDNDSLFGGAGTDTIS--GNLGDDTIDGGEGNDTINGNEDNDSL 666
Query: 537 INAFADAPDLVQAGKD 552
G D
Sbjct: 667 FGGAGTDTISGNLGDD 682
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 52/431 (12%), Positives = 100/431 (23%), Gaps = 23/431 (5%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G V G ND S + DS+ T ++D + +
Sbjct: 80 GGQGNDTVVGGNFNDTLYGSEGFDTIQGGGGDDSIGGGLQTASQTSDLADTIDGGEGNDI 139
Query: 198 PKGSLGNNIYKIE------------VQQKDSPFIQTIYDSGGDDLLDLTLIG----GVKN 241
G+LG + ++ G D + G
Sbjct: 140 IFGNLGIDTLVGNIGNDTVFGGRDGDSIDGGLDNDSLVGGEGADTITGGTGNDTLVGGLQ 199
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ ++ G N I + ++++G G+D++ G N+ + ND G
Sbjct: 200 TSSQTGDLADNLNGGLGNDVIFGNLGNDTLIGDIGDDILFGGRDNDTLSGGANNDSLVGG 259
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G DT I D + + + + I
Sbjct: 260 EGADTI--TGDEGDDTIRGGLQTASQSDDLADSLNGGLGNDLIFGNLGNDTLLGDIGDDI 317
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L + + QD ++ G D +D + +
Sbjct: 318 LFGGIDNDSIDGGADQDSLVGGENIDTITGGAGNDTIIGGLQSGDQSNDEADNI-NGGVG 376
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
GV + ++ + + + G D +
Sbjct: 377 NDSILGNIGVDTLLGDAGNDIIFGGRDNDSIDGGTENDSLIGGEGTDTLVGGNGNDTIIG 436
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
+ G D + GV AL ++ +
Sbjct: 437 GLQTADQSGDQGDTITGGDGNDSIL----GNSGVDTLLGDGGNDALFGGRDNDTIDGGEN 492
Query: 542 DAPDLVQAGKD 552
D + G D
Sbjct: 493 DDTLVGGEGTD 503
>gi|119483379|ref|ZP_01618793.1| hypothetical protein L8106_04981 [Lyngbya sp. PCC 8106]
gi|119458146|gb|EAW39268.1| hypothetical protein L8106_04981 [Lyngbya sp. PCC 8106]
Length = 1551
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 60/384 (15%), Positives = 111/384 (28%), Gaps = 30/384 (7%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+DI+ A G++I + + + I G D L G +
Sbjct: 1115 ANDILTGTSNNEAVFSFGGDDIINGLEGQDWLEGEKGDDQIRGDMGHDSL--IGDDGNDS 1172
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ + +SS N I+ G GND + GN + ++ G+D G
Sbjct: 1173 LLGGRDDEFSSTRDTNGNDWIS---------GGFGNDFISGNESEDMLMGDEGDDFAYGG 1223
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER-LRFADQCIDSV-NVKQR 359
G D F + + +N ++ + E+ + F Q D + +
Sbjct: 1224 QGDDQLF--GDQGNDTLCGDRGNDTIVGSNGSEKAVGNTEEKDVLFGYQDNDLIQGGQGE 1281
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS-----YDDLRNV 414
I+ + D+ +G D F + D
Sbjct: 1282 DIIYTGKGNDISFAGKDNDLVWGDHGDDTLSGDDGDDTLFGDTNDPNATEMQGKDMASGG 1341
Query: 415 FGSDRGAAARHYITHGVKEGRN---PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
G+D R+ T EG++ Y + +DL+ L +
Sbjct: 1342 SGNDFIGGNRNNDTLMGGEGQDTIRGGKEDDFLYGETGDDLLFGDLGNDKLCGNDGNDIL 1401
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
E+ + + L G+ DD+ + AA G L+ A
Sbjct: 1402 FGDTEDEQAAGGNDTLIGGNGDDILS----GNQAADILCGGEGNDSLHGGKDNDILKGKA 1457
Query: 532 SHEDLINAFADAPDLVQAGKDHFS 555
+ L + +D+F
Sbjct: 1458 GVDWLFGDEGNDTLTGGEDRDYFV 1481
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 28/254 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ I + D G T+ G
Sbjct: 1277 GGQGEDIIYTGKGNDISFAGKDNDLVWGDHGDDTLSGDDGDDTLFGDTNDPNATEMQG-K 1335
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
S G G + + ND+ + + D +G ++ + K+
Sbjct: 1336 DMASGGSGNDFIGGNRN--NDTLMGGEGQDTIRGGKEDDFLYGETGDDLLFGDLGNDKLC 1393
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + GN+I + + + + GG+D L + + G
Sbjct: 1394 G----NDGNDILFGDTEDEQAA--------GGNDTL-------------IGGNGDDILSG 1428
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + +S+ G ND++ G + + F GND G D F + + S
Sbjct: 1429 NQAADILCGGEGNDSLHGGKDNDILKGKAGVDWLFGDEGNDTLTGGEDRDYFVFSSHSGT 1488
Query: 316 YKIYRFENAIIVYD 329
+ F+ +
Sbjct: 1489 DIVEDFKVGEDLIV 1502
>gi|146305756|ref|YP_001186221.1| hemolysin-type calcium-binding region [Pseudomonas mendocina ymp]
gi|145573957|gb|ABP83489.1| Hemolysin-type calcium-binding region [Pseudomonas mendocina ymp]
Length = 1764
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/269 (14%), Positives = 70/269 (26%), Gaps = 25/269 (9%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
GD + G + + + +++ +++ G G+DV+IG
Sbjct: 945 GGSGDIYVKRFDANGNSLTLSGDDGDNTLTWTGSSGVSLDGGAGNDTLTGGDGHDVLIGG 1004
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ NNV GND+ Y + + I +E
Sbjct: 1005 AGNNVLKGGKGNDL-----------YIIENANDILIEEAGGGIDTVMTGASYTLGEHLEN 1053
Query: 344 LRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
L D I+ + L L G D + + + RD+
Sbjct: 1054 LTLTGDADINGTGNNAENRLVGNRGNNILDGGAGADTLIGGEGDDIYIVDNLRDVVI--- 1110
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAP 460
+ G+D A+ + E L + D LI +
Sbjct: 1111 --------EKEGEGTDTVRASVTWTLGTNLEYLELTGSANLSGTGNELDNRLIGNDGNNS 1162
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G D+ + Y+
Sbjct: 1163 LNGGAGNDYLDGGKGLDKLIGGIGDDTYI 1191
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/515 (13%), Positives = 140/515 (27%), Gaps = 52/515 (10%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E ++ D + N + + AD G G + N +
Sbjct: 1052 ENLTLTGDADINGTGNNAENRLVGNRGNNILDGGAGADTLIGGEGDDIYIVDNLRDVVIE 1111
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G G + +Y + ++ D+ + + G + +
Sbjct: 1112 KEGEGTDTVRASVTWTLGTNLEYLELTGSANLSGTGNELDNRLIGNDGNNSLNGGAGNDY 1171
Query: 191 VQKIYGAPK--GSLGNNIYKIEVQQKDSPFIQTIY--------DSGGDDLLDLTLIGGVK 240
+ G K G +G++ Y +++ QK + ++ + GDD L L +
Sbjct: 1172 LDGGKGLDKLIGGIGDDTYIVDLVQKGTGAKASVALEDTVTEAANAGDDALILRGEVLTE 1231
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
NY L + + + G++G++V+IGN A+NV +G D G
Sbjct: 1232 NYTTLTLGANLETLDASQ-----TGLSRLHLSGNAGDNVLIGNDADNVLDGKAGIDTLIG 1286
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-------------KQDFLSDVERLRFA 347
G DT+ L + + Q L VE ++
Sbjct: 1287 GKGNDTYVLDRQEELALVEEIAGEGDDTLRITYRNNSKTEALVVDLNQANLQHVENIQLT 1346
Query: 348 DQCI-DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
I + + ++L+ + L G D + +D G
Sbjct: 1347 GSGIFELIGNDFANVLDGGNNAAVLRGGAGDDTYIVGH----------KDAQVIELDGEG 1396
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVK--EGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
D +++ GA + G G + L + L
Sbjct: 1397 DNDTVKSTVNWTLGANLENLTLLGKAALNGTGNELSNLLIGNDGNNILDGGTGADRMEGG 1456
Query: 465 VGKDHFS----NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
G D + + E D+ +Y L + + + G +
Sbjct: 1457 KGNDTYIVDHEDDVVVENDKEGIDTVKASVTYT-LGDNVENLILTGSGDIDGSGNELNNA 1515
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ L G D +
Sbjct: 1516 ITGNEKDN------RLDGGAGVDKLAGGGGNDTYI 1544
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 68/583 (11%), Positives = 137/583 (23%), Gaps = 69/583 (11%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ L + E + R ++ W+ +L + E + + N
Sbjct: 1098 DIYIVDNLRDVVIEKEGEGTDTVRASV-TWTLGTNLEYLELT--GSANLSGTGNELDNRL 1154
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D G G ++ + + L+ G+
Sbjct: 1155 IGNDGNNSLNGGAGNDYLDGGKGLDKLIGGIGDD--TYIVDLVQKGTGAKASVALEDTVT 1212
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
++ ++ + + A D G+ G+N+
Sbjct: 1213 EAANAGDDAL-ILRGEVLTENYTTLTLGANLETLDASQTGLSRLHLSGNAGDNVLIGNDA 1271
Query: 213 QK---DSPFIQTIYDSGGDDLLDLT----------LIGGVKNYIDLNTESWSSIGGYEKN 259
I T+ G+D L + G + + + + S +
Sbjct: 1272 DNVLDGKAGIDTLIGGKGNDTYVLDRQEELALVEEIAGEGDDTLRITYRNNSKTEALVVD 1331
Query: 260 MTIAQHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ A +E++ + SG +IGN NV + V G +G DT+
Sbjct: 1332 LNQANLQHVENIQLTGSGIFELIGNDFANVLDGGNNAAVLRGGAGDDTYIVGHKDAQVIE 1391
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
E + +++E L ++ + ++L L G
Sbjct: 1392 LDGEG-DNDTVKSTVNWTLGANLENLTLLGKAALNGTGNELSNLLIGNDGNNILDGGTGA 1450
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE--GR 435
D E K + + D+ D ++ G + I G + G
Sbjct: 1451 DRMEGGKGNDTYIVDHEDDVV--VENDKEGIDTVKASVTYTLGDNVENLILTGSGDIDGS 1508
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS------------------------ 471
+ A+ L G D +
Sbjct: 1509 GNELNNAITGNEKDNRLDGGAGVDKLAGGGGNDTYIVDLIQKGTGAKATAVLEDSIVEKA 1568
Query: 472 ----------------NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
F + + + + + G
Sbjct: 1569 NEGTDTLELRSDRLPSEFSGTASITLGANLENLDARNTGTLKLTLTGNALNNEIWGNAGD 1628
Query: 516 KEGRNPDAFK---ALEYIASHEDLINAFADAPDLVQAGKDHFS 555
A + S+ LI AG D F
Sbjct: 1629 NTLNGGAGNDILHAGNGVGSNNILIGGAGADIMHGGAGDDTFR 1671
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/253 (13%), Positives = 65/253 (25%), Gaps = 22/253 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNTESWSSIGGYEKNMTIA 263
+ G+D + K ID S + G I
Sbjct: 1440 GNNILDGGTGADRMEGGKGNDTYIVDHEDDVVVENDKEGIDTVKASVTYTLGDNVENLIL 1499
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ G+ N+ + GN +N +G D G G DT+
Sbjct: 1500 TGSGDIDGSGNELNNAITGNEKDNRLDGGAGVDKLAGGGGNDTYIVDLIQKGTGAKATAV 1559
Query: 324 -AIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSI-----------LEYTASY 368
+ + D L SD F+ ++ ++ L A
Sbjct: 1560 LEDSIVEKANEGTDTLELRSDRLPSEFSGTASITLGANLENLDARNTGTLKLTLTGNALN 1619
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
++ G + G + ++ L G+ D+ + D
Sbjct: 1620 NEIWGNAGDNTLNGGAGNDILHA--GNGVGSNNILIGGAGADIMHGGAGDDTFRFTSLKD 1677
Query: 429 HGVKEGRNPDAFK 441
G+ EG+ +
Sbjct: 1678 LGLGEGKQDEIHD 1690
Score = 57.5 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 66/196 (33%), Gaps = 13/196 (6%)
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY 223
+Y + + ++ A+Q + + Y+ +V +
Sbjct: 376 TYLAVWSTYNWSDGNTTYAKLL--DAALQPLGDNFIVNASGTSYEAKVTALPDGGFIITW 433
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTES--WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ ++ + + + D + I G + + ++ + ++
Sbjct: 434 TNANENGDSGSSLFSQRYDADGRPTGNAITVIEGDDGDNSLTW--------TGDDDVILR 485
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + ++ +GND+ DG G DT + Y + + A + +D L +
Sbjct: 486 GGAGDDRLAGGNGNDILDGGQGDDTAIFTGDQADYSFS-LDPQGRLQIAKGNLRDTLISI 544
Query: 342 ERLRFADQCIDSVNVK 357
E+L+FAD I +
Sbjct: 545 EQLQFADGSITVDDGS 560
>gi|400425|emb|CAA81206.1| leukotoxin A [Mannheimia haemolytica]
Length = 955
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 22/228 (9%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
G G + + EI G G Y +D E + +V + +
Sbjct: 612 TLGDGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VES 669
Query: 171 SMMDASFGYCATPMVSDIVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
T +V + ++ + + G Y + K ++ I + +D
Sbjct: 670 GKALHEGTSTHTALVGNREEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHND 723
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + + G + TI + + + G G+D++ G + ++
Sbjct: 724 IFKGSKFN-------------DAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFI 770
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
GND+ G G D F + I E + ++ + +D
Sbjct: 771 DGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDL 818
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 47/212 (22%), Gaps = 48/212 (22%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIV------ 327
V ++ F SG DG G D Y +Y + V
Sbjct: 610 VATLGDGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVES 669
Query: 328 ------------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ A + +D L VE + K
Sbjct: 670 GKALHEGTSTHTALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSK 729
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ + G D K G D ++ G +DL +
Sbjct: 730 FNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKG 784
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
D H G + L + S+
Sbjct: 785 DDI--FVHRQGDGNDSITESEGNDKLSFSDSN 814
>gi|238898312|ref|YP_002923993.1| putative RTX-family protein-14 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466071|gb|ACQ67845.1| putative RTX-family protein-14 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 1974
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 56/158 (35%), Gaps = 6/158 (3%)
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVK 240
M+ D+ Q+++ + N Y Q + + GGD L D TL
Sbjct: 1735 LMLMDVE--QQLF-EISLNQENRPYFFHPQSHVNATENADFLRIYGGDVLADNTLDAKEG 1791
Query: 241 NY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
N I N++ ++ G E + TI + + G +G+D + ++ GND
Sbjct: 1792 NDNIFDNSDRLHTLRGGEGDDTIVAPKGNKKLFGGAGHDQLFSGEGDDELNGGQGNDRLS 1851
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
G G DT+ + I + +D
Sbjct: 1852 GGKGDDTYVIHRQDDRTYIEDSGGTDEIVLMGMALKDL 1889
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 46/128 (35%), Gaps = 8/128 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLL----DLTLIGGVKNYIDLNTESW 250
G+ + GN + P ++ ++ G G+DL+ DLT I+L
Sbjct: 1316 GSKHYTGGNQADVFYLFTATVPETRSYFNGGEGEDLIIAEHDLTGTPYQGYGINLQKNEV 1375
Query: 251 SSIGGYEKNMT--IAQHTVIESVVGS-SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+N IA IE + G + D ++GN NN+ G D G G DT
Sbjct: 1376 RFRINQTENFWPLIANLKEIEHIHGHMTTRDYLVGNEKNNILNGLGGRDEIWGHGGNDTL 1435
Query: 308 FYYAPSYL 315
Sbjct: 1436 ILEQGIAS 1443
Score = 47.1 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 4/91 (4%)
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+N + + N++ D + LR + V K L A ++ L G D
Sbjct: 1782 ADNTLDAKEGNDNIFDNSDRLHTLRGGEGDDTIVAPKGNKKLFGGAGHDQLFSGEGDDEL 1841
Query: 381 ESMKHFYEFGLSEGRDIT----FDSYLYLGS 407
+ +G D D Y+
Sbjct: 1842 NGGQGNDRLSGGKGDDTYVIHRQDDRTYIED 1872
Score = 40.9 bits (94), Expect = 0.75, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 89/312 (28%), Gaps = 63/312 (20%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ T+ D+ D + ++ ++ + + + + + ++ +T +
Sbjct: 1563 FPFIPRFQAQYTTLLDAPHQDYFKMQEPDNIRLSLNKSPDG-DFVSVGKDTLRLSLNTQL 1621
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD--------------TFFYYAPSY 314
+ + +D++ G+ +NV S GND G G D T
Sbjct: 1622 -VLNDTPFDDILNGDRQDNVLISSRGNDKLRGGKGQDIYQIQMKDSAQTERTVSIDNKDD 1680
Query: 315 LYKIYRF--------------ENAIIVYDANEHKQDFLSDVERLRF----ADQCIDSVN- 355
++ + V + ++ ++ L F A + + ++
Sbjct: 1681 QAELEVDLLMLPFKIEDLKIETSGQHVILSPSNEPQTNLRIKLLDFIRDKAYRHLMLMDV 1740
Query: 356 ---------------VKQRSILEYTAS-YEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
A+ D +++ G DV EG D F
Sbjct: 1741 EQQLFEISLNQENRPYFFHPQSHVNATENADFLRIYGGDVLAD----NTLDAKEGNDNIF 1796
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
D+ L LR G D A + G K+ L ++L +
Sbjct: 1797 DNSDRL---HTLRGGEGDDTIVAPK-----GNKKLFGGAGHDQLFSGEGDDELNGGQGND 1848
Query: 460 PDLVQVGKDHFS 471
G D +
Sbjct: 1849 RLSGGKGDDTYV 1860
>gi|284006497|emb|CBA71758.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 304
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 72/209 (34%), Gaps = 10/209 (4%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ GN+ + + TI GDD+L G N I L I G
Sbjct: 30 SGNAGNDTILGDTGDDNLSGNAGDDTILGDEGDDILK----GNAGNDIILGDAGDDEILG 85
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N I+ + +++ G SG+D++ G S ++ SGND G SG DT + +
Sbjct: 86 DAGNDQISGGSGNDNISGGSGDDMLSGGSGDDTLRGDSGNDRILGGSGDDTMY--GDAGN 143
Query: 316 YKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ ++ + S +++ R L S + L
Sbjct: 144 DIMSGDSGNDMLSGGLGNDTLLGGSGDDKISGDAGNDIISGGLGRDTLTGDFSDKHLEGN 203
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYL 403
G D F+ + S + F++
Sbjct: 204 RGNDTFQYLSINDSLSASPDKITDFETGS 232
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/225 (13%), Positives = 59/225 (26%), Gaps = 10/225 (4%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI+ + ++++G +G+D + GN+ N+ +G+D G++G DT +
Sbjct: 9 DTISGNAGDDTILGDAGDDNLSGNAGNDTILGDTGDDNLSGNAGDDTIL--GDEGDDILK 66
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
I+ + + + + L G D
Sbjct: 67 GNAGNDIILGDAGDD--------EILGDAGNDQISGGSGNDNISGGSGDDMLSGGSGDDT 118
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
G D + D N S G +
Sbjct: 119 LRGDSGNDRILGGSGDDTMYGDAGNDIMSGDSGNDMLSGGLGNDTLLGGSGDDKISGDAG 178
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ + L F+D G D F + + D
Sbjct: 179 NDIISGGLGRDTLTGDFSDKHLEGNRGNDTFQYLSINDSLSASPD 223
>gi|163853112|ref|YP_001641155.1| hypothetical protein Mext_3709 [Methylobacterium extorquens PA1]
gi|163664717|gb|ABY32084.1| hypothetical protein Mext_3709 [Methylobacterium extorquens PA1]
Length = 255
Score = 72.9 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 13/85 (15%)
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWNV 582
Y+A++ D+ A P + H+ FG EGR+ + F+ YL + DL V
Sbjct: 160 DRDYYLAANPDVAAAD-VDPLV------HYLEFGGREGRAPSALFDGVRYLDANPDLREV 212
Query: 583 FGSDRSAAAQHYITHGMKEGRALGI 607
H+I +G+ E R G+
Sbjct: 213 ----GINPLLHFILYGVVERRPCGV 233
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
D YL + D+ HY+ G +EGR P A F + Y+ ++ DL
Sbjct: 159 LDRDYYLAANPDVAAA----DVDPLVHYLEFGGREGRAPSALFDGVRYLDANPDLRE-VG 213
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
P L HF +G E R
Sbjct: 214 INPLL------HFILYGVVERR 229
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 14/94 (14%)
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNV 498
Y+A++ D+ A D H+ FG EGR + FD YL + DLR V
Sbjct: 160 DRDYYLAANPDVAAADVDP-------LVHYLEFGGREGRAPSALFDGVRYLDANPDLREV 212
Query: 499 FGSDRGAAARHYITHGVKEGRNPD-AFKALEYIA 531
+ H+I +GV E R L Y +
Sbjct: 213 GIN----PLLHFILYGVVERRPCGVPLDLLPYAS 242
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 12/106 (11%)
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYL 403
+DQ + + + Y A+ D + D H+ EFG EGR FD
Sbjct: 147 LSDQSLVAASGLLDRD-YYLAANPD-VAAADVDPLV---HYLEFGGREGRAPSALFDGVR 201
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIAS 448
YL + DLR V H+I +GV E R L Y +
Sbjct: 202 YLDANPDLREV----GINPLLHFILYGVVERRPCGVPLDLLPYASP 243
>gi|301604612|ref|XP_002931938.1| PREDICTED: stromelysin-3-like [Xenopus (Silurana) tropicalis]
Length = 478
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 60/196 (30%), Gaps = 52/196 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + YK + + AL WS+V LTF E
Sbjct: 89 LSGGRWDKTNLTYKIIRFPWQLSKVKV-------RRTIAEALMVWSEVTPLTFTEVHEGR 141
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
SDI + + P+ +++FD + W G GT L
Sbjct: 142 SDIIIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDEAWTIGNNIGTDLL 199
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H S S+MS +F Y
Sbjct: 200 QVAAHEFGHMLGLQHS-------------------SVSKSLMS--------PFYTFRYPL 232
Query: 182 TPMVSDIVAVQKIYGA 197
+ D +Q +YGA
Sbjct: 233 SLSADDKHGIQFLYGA 248
>gi|4096734|gb|AAC99995.1| matrix metalloproteinase RASI-1 [Homo sapiens]
Length = 308
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 51/162 (31%), Gaps = 38/162 (23%)
Query: 50 NAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF--------- 99
A+ R A +WS V LTF+E + +DI+
Sbjct: 45 TARAALRQAFQDWSNVAPLTFQEVQAGAADIRLSFHGRQSSYCSNTFDGPGRVLAHADIP 104
Query: 100 --MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
++FD+ + W G +G L A HE+GHALGL H
Sbjct: 105 ELGSVHFDEDEFWTEGTYRGVNLRIIAAHEVGHALGLGH--------------------- 143
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
Y + + + D+ +Q +YG
Sbjct: 144 -----SRYSQALMAPVYEGYRPHFKLHPDDVAGIQALYGKKS 180
>gi|307690596|ref|ZP_07633042.1| putative calcium binding hemolysin protein [Clostridium
cellulovorans 743B]
Length = 766
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/316 (14%), Positives = 83/316 (26%), Gaps = 28/316 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D D G + + I +G
Sbjct: 475 YGGLGTDKLYGYDGNDYIDGGEGDDNIDGGDGQDTLIGCGGNDYLYGGKSNDIIYGNIGN 534
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H G YG D + Y + +D G DI +
Sbjct: 535 DHIECGEGADKSYGGVGDDTLYGGSGNDSLYGEDGRNYIDGGEGEDILYGGRDI---DIL 591
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG K I G D + + +
Sbjct: 592 YGG----------KGNDIIDGKAGNDYISGGDGVDKITGDVGDDKV----YGENGNDYLY 637
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N ++ + + G GND++ G N+ + G+D+ G G D +
Sbjct: 638 GKTGNDSLYGGIGEDQLYGDEGNDIIYGEVGNDKLYGGLGDDLLYGGEGTDVIVGGEGND 697
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+Y + A + + D V++L F+D V ++ + I++
Sbjct: 698 IYVFAKGNGADTIINNTSSNID----VDKLLFSD-------VSLSETKFLKSNKDLKIKI 746
Query: 375 IGQDVFESMKHFYEFG 390
G ++ ++ +G
Sbjct: 747 NGTSEVITISGYFNYG 762
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 48/314 (15%), Positives = 80/314 (25%), Gaps = 30/314 (9%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + +++ G G+DV+ G ++ GND G G D + K+Y +
Sbjct: 429 IKGNAKADTLYGGEGDDVIYGGKGDDFIDGKGGNDSIFGEEGADKLY--GGLGTDKLYGY 486
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + D + L S + + IG D E
Sbjct: 487 DGNDYIDGGEGDDNIDGG--------DGQDTLIGCGGNDYLYGGKSNDIIYGNIGNDHIE 538
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG--RNPDA 439
+ + G D Y GS +D R+YI G E
Sbjct: 539 CGEGADKSYGGVGDDTL-----YGGSGNDSLYGEDG------RNYIDGGEGEDILYGGRD 587
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRN 497
L ++ + + G D + ++ D D L
Sbjct: 588 IDILYGGKGNDIIDGKAGNDYISGGDGVDKITGDVGDDKVYGENGNDYLYGKTGNDSLYG 647
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
G D + Y G L + L + G D +
Sbjct: 648 GIGED-----QLYGDEGNDIIYGEVGNDKLYGGLGDDLLYGGEGTDVIVGGEGNDIYVFA 702
Query: 558 GYEEGRSITFNPDL 571
+I N
Sbjct: 703 KGNGADTIINNTSS 716
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/339 (15%), Positives = 94/339 (27%), Gaps = 40/339 (11%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
K + T+Y GDD++ G ++ID SI G E + + +
Sbjct: 429 IKGNAKADTLYGGEGDDVIY---GGKGDDFID-GKGGNDSIFGEEGADKLYGGLGTDKLY 484
Query: 273 GSSGND------------------VVIGNSANNVFFESSGNDVFDGSSGLDTFF------ 308
G GND +IG N+ + ND+ G+ G D
Sbjct: 485 GYDGNDYIDGGEGDDNIDGGDGQDTLIGCGGNDYLYGGKSNDIIYGNIGNDHIECGEGAD 544
Query: 309 -YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS-VNVKQRSILEYTA 366
Y +Y +Y + + E + + + ID K I++ A
Sbjct: 545 KSYGGVGDDTLYGGSGNDSLYGEDGRNYIDGGEGEDILYGGRDIDILYGGKGNDIIDGKA 604
Query: 367 SYEDLIQV---------IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ + +G D G D + Y D N
Sbjct: 605 GNDYISGGDGVDKITGDVGDDKVYGENGNDYLYGKTGNDSLYGGIGEDQLYGDEGNDIIY 664
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ Y G + + ++ + A + D + +
Sbjct: 665 GEVGNDKLYGGLGDDLLYGGEGTDVIVGGEGNDIYVFAKGNGADTIINNTSSNIDVDKLL 724
Query: 478 GRFVTFDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGV 515
V+ +L S DL+ G+ Y +G
Sbjct: 725 FSDVSLSETKFLKSNKDLKIKINGTSEVITISGYFNYGK 763
Score = 46.7 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 50/350 (14%), Positives = 89/350 (25%), Gaps = 54/350 (15%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + + + GS +D + GN ++ GND +G G DT+ S
Sbjct: 276 YGQGVVTGYESNDIITGSDLDDKIYGNGGKDILNGLRGNDYLNGGIGNDTYILGLDSGEK 335
Query: 317 KIYRFE--------------------------NAIIVYDANEHKQDFLSD---------- 340
I ++ N + + N +++ +++
Sbjct: 336 TIEDYDETEGNIDTIKFEQGINPEDISFKRTENNLEIKIKNSNEKITITNYFIDVSTENI 395
Query: 341 ---VERLRFADQCIDSVNVKQRSILE---------YTASYEDLIQVIGQDVFESMKHFYE 388
VE++ F I + IL A + L G DV K
Sbjct: 396 KNKVEKIEFFSGVIWDDKTIAKEILRGNEIGKIIKGNAKADTLYGGEGDDVIYGGKGDDF 455
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G D F Y L G D L
Sbjct: 456 IDGKGGNDSIFGEEGADKLYGGLGTDKLYGYDGNDYIDGGEGDDNIDGGDGQDTLIGCGG 515
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF-DSYLYLGS-----YDDLRNVFGSD 502
++ L ++ +G DH + + D LY GS Y + +
Sbjct: 516 NDYLYGGKSNDIIYGNIGNDHIECGEGADKSYGGVGDDTLYGGSGNDSLYGEDGRNYIDG 575
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
Y + ++ A ++ + G D
Sbjct: 576 GEGEDILYGGRDIDILYGGKGNDIIDGKAGNDYISGGDGVDKITGDVGDD 625
Score = 44.4 bits (103), Expect = 0.060, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 61/202 (30%), Gaps = 42/202 (20%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG--------------- 303
+ + + + G+ GND + G N+ GND + + G
Sbjct: 3 DYQLVGTEKNDVLNGNIGNDTLDGGLGNDQLTGGKGNDKYIFNRGYGKDIIIDNDKTIGN 62
Query: 304 LDTFFYYA--PSYLYKIYRFENAIIVYDANEHKQDFLSD--------VERLRFADQCI-- 351
+DT + + + Y+ N + + + +S+ +E + F+D I
Sbjct: 63 IDTIVFGEGISASELQFYKSGNNLKILIRDTEDSITISNYYYQDSYKIEEICFSDGTIWD 122
Query: 352 ---------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ I+ + + L G D+ +K G D
Sbjct: 123 QKTISIQPIHINGTGVISGYETNDIITGSDFDDQLYGYGGDDILNGLKGNDYLNGGIGND 182
Query: 397 ITFDSYLYLGSYDDLRNVFGSD 418
+ + D + GSD
Sbjct: 183 VYLFNIGSGKEVIDDYDETGSD 204
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 27/225 (12%), Positives = 57/225 (25%), Gaps = 62/225 (27%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
I+ + + + GS +D + G +++ GND +G G D + + S
Sbjct: 134 NGTGVISGYETNDIITGSDFDDQLYGYGGDDILNGLKGNDYLNGGIGNDVYLFNIGSGKE 193
Query: 317 KIYRFENAIIVYDANEHKQ----------------------------------DFLSDVE 342
I ++ D + + + +E
Sbjct: 194 VIDDYDETGSDIDTILFGEKINPIDLQFSRNENNLKIIIRGTEDSIEILNYYNNLNNKIE 253
Query: 343 RLRFADQCI--------------------------DSVNVKQRSILEYTASYEDLIQVIG 376
+++F+D I + + L + G
Sbjct: 254 KIQFSDGTIWDQKTIDSQPIYIYGQGVVTGYESNDIITGSDLDDKIYGNGGKDILNGLRG 313
Query: 377 QDVFESMKHFYEFGLSE--GRDITFDSYLYLGSYDDLRNVFGSDR 419
D + L G D G+ D ++ G +
Sbjct: 314 NDYLNGGIGNDTYILGLDSGEKTIEDYDETEGNIDTIKFEQGINP 358
>gi|123441718|ref|YP_001005702.1| putative serine protease [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088679|emb|CAL11481.1| putative serine protease [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 1803
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/228 (13%), Positives = 63/228 (27%), Gaps = 13/228 (5%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
++ A + ++ G G+D + +++ + G++ + G++G D F A
Sbjct: 559 TNSGDVLFADELKVNNIYGGHGDDRLSASASGSWLVGRGGSNTYIGNTGDDVFVISASDD 618
Query: 315 LYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSIL-EYTASYED 370
I V A + S + ++ D V+ S+ +
Sbjct: 619 TNNIKGNGGRDTVLIAGKKGVALNMARSGITIVQGGDGDDIIVSGGNNSVFIKGGKGNAT 678
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L+ G DV G+ + Y GS D Y G
Sbjct: 679 LVGGGGNDVLAGGSGKNLIIGGSGKAVI-----YAGSQGDTLYASEQGSII----YAGGG 729
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ +E + + ++ + G
Sbjct: 730 ADRIYGNEGHDVIEAGHGDAQIDGGGGINLVALHGSYADYTITRTDSG 777
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/229 (20%), Positives = 78/229 (34%), Gaps = 17/229 (7%)
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G + N G V+ + + ++ + ++ G S I VQ
Sbjct: 597 GGSNTYIGNTGDDVFVISASDDTNNIKGN----GGRDTVLIAGKKGVALNMARSGITIVQ 652
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G G N V K T+ GG+D+L G KN I +
Sbjct: 653 GGDGDDIIVSGGN---NSVFIKGGKGNATLVGGGGNDVL---AGGSGKNLIIGGSGKAVI 706
Query: 253 IGGYEKN--MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G + + Q ++I G D + GN ++V G+ DG G++ +
Sbjct: 707 YAGSQGDTLYASEQGSII---YAGGGADRIYGNEGHDVIEAGHGDAQIDGGGGINLVALH 763
Query: 311 APSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSVNVK 357
Y I R ++ + D A L ++++L FAD +N
Sbjct: 764 GSYADYTITRTDSGFQIRDKVAGRDGTLALKNIQKLNFADISAVDLNTN 812
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 54/190 (28%), Gaps = 24/190 (12%)
Query: 191 VQKIYGAPKG--SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL--------IGGVK 240
+ G+ + G++++ I + I +GG D + +
Sbjct: 593 LVGRGGSNTYIGNTGDDVFVISASDDTNN----IKGNGGRDTVLIAGKKGVALNMARSGI 648
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ + G ++ I ++VG GNDV+ G S N+ SG V
Sbjct: 649 TIVQGGDGDDIIVSGGNNSVFIKGGKGNATLVGGGGNDVLAGGSGKNLIIGGSGKAVIYA 708
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
S DT + + + D + +
Sbjct: 709 GSQGDTLY----ASEQGSIIYAGGGADRIYGNEGHDV------IEAGHGDAQIDGGGGIN 758
Query: 361 ILEYTASYED 370
++ SY D
Sbjct: 759 LVALHGSYAD 768
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+GG + L+ I G I+L T + G +TI I ++V GNDV+
Sbjct: 1444 AGGRNTLNAAAISGAVK-INLVTGEANLGGTT---LTINSPQTIHNIVSGDGNDVLTAGR 1499
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFY 309
N++ G + +G +G + F
Sbjct: 1500 NNSLLDGGRGRNTLEGGAGKEIFVV 1524
>gi|149716844|ref|XP_001498924.1| PREDICTED: similar to matrix metalloproteinase-12 [Equus caballus]
Length = 470
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 63/191 (32%), Gaps = 47/191 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W +FI Y+ T D+ + A WS V L F + + +DI
Sbjct: 110 WKKHFITYRIKNYTPDMKPEDVDY-------AIQKAFQVWSDVTPLKFRKINTGEADIMI 162
Query: 82 ISSNNGYVCTPRY-------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
++ + + + +FD+A++W KGT L A+HE+
Sbjct: 163 QFAHGAHGDYSPFDGRNGILAHAFGPGPGIGGDTHFDEAEIWTKSY-KGTNLFLVAVHEL 221
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + SY DI
Sbjct: 222 GHSLGLGHSHDPKA---------------IMFPTYSYID----------LSTFRLSADDI 256
Query: 189 VAVQKIYGAPK 199
+Q +YGAP+
Sbjct: 257 RGIQSLYGAPE 267
>gi|89053557|ref|YP_509008.1| hemolysin-type calcium-binding protein [Jannaschia sp. CCS1]
gi|88863106|gb|ABD53983.1| Hemolysin-type calcium-binding protein [Jannaschia sp. CCS1]
Length = 950
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 58/403 (14%), Positives = 108/403 (26%), Gaps = 14/403 (3%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
SD + D+ + D G + N+ G
Sbjct: 52 SDGTSTFTIGDANHGGSSDATLGGSTQWTYFDNVEGSQGDDSYTGDNSADRYEGQAGDDT 111
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
G + G D D Y + + G ++ G
Sbjct: 112 VQGGGGDDYLDGWQGDDSIDGEDGDDFIYGYDGNDTISGGAGNDTIDGEDGDDSIDGGSG 171
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
S G + TI G+D +D GG + +I G
Sbjct: 172 NDSLSGG----GGNDTIQGGDGRDTIDGGSGNDSID----GGGDSDTISGGSGADTIDGG 223
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ I+ + + G +G+D + G + +V + G+D DG +G DT S
Sbjct: 224 AGDDQISGGDGADVITGGTGDDTIDGGAGADVIHGNDGDDSLDGGTGDDTIHGGDGSDTI 283
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ N+ + + +A +S ++ L TA D +
Sbjct: 284 LLGDDGNSGRTKVNAGDNLQGTTGQDAYEWAGGAGNSAVIRFN--LSATAGDSDGLADYV 341
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY-ITHGVKEGR 435
G DI D+ + ++ + G G Y +T+ +
Sbjct: 342 VVTNADDAGTLTIG---DFDIGIDTIYIQEPWANVSSSTGDYNGTPFETYTLTYADGAQQ 398
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ + D+ + V G D + +
Sbjct: 399 TFRIYHDGSTPPNVADIFSTGTSPSAAVPDGNDSVTGGSDADT 441
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 36/351 (10%), Positives = 73/351 (20%), Gaps = 12/351 (3%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ D F +I SG +D + + ++ TI
Sbjct: 3 TYFVTTSNWNDPSFWSSINQSGDGHSIDFGNLPSNFSVEFDKGSGLVTLSDGTSTFTIGD 62
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
S + G + S G+D + G + D + A + ++
Sbjct: 63 ANHGGSSDATLGGSTQWTYF--DNVEGSQGDDSYTGDNSADRYEGQAGDDTVQGGGGDDY 120
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + ++ + D + A + + G D +
Sbjct: 121 LDGWQGDDS----------IDGEDGDDFIYGYDGNDTISGGAGNDTIDGEDGDDSIDGGS 170
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G D N G + G +
Sbjct: 171 GNDSLSGGGGNDTIQGGDGRDTIDGGSGNDSIDGGGDSDTISGGSGADTIDGGAGDDQIS 230
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ + D G D ++ G + G D
Sbjct: 231 GGDGADVITGGTGDDTIDGGAGADVIHGNDGDDSLDGGTGDDTIHGGDGSDTILLGDDGN 290
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ +G A + +I A G +
Sbjct: 291 SGRTKVNAGDNLQGTTGQDAYEWAGGAGNSAVIRFNLSATAGDSDGLADYV 341
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 58/428 (13%), Positives = 108/428 (25%), Gaps = 52/428 (12%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG-- 129
T +++ + + I F+ + G + + G
Sbjct: 293 RTKVNAGDNLQGTTGQDAYEWAGGAGNSAVIRFNLSATAGDSDGLADYVVVTNADDAGTL 352
Query: 130 ----HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+G+ V DY F T ++Y P V
Sbjct: 353 TIGDFDIGIDTIYIQEPWANVSSSTGDYNGTPFETYTLTYADGAQQTFRIYHDGSTPPNV 412
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+DI + A +++ + D G+D ++ G + IDL
Sbjct: 413 ADIFSTGTSPSAAVPDGNDSVTGGSD-----ADTFVVSDGFGNDTVEGGSGGTDYDTIDL 467
Query: 246 ----NTESWSSIGGYEKNMTIAQHTV----IESVVG--------------------SSGN 277
+ S G +T +T+ IE + +G+
Sbjct: 468 SSLTGPVTVSYSGTEAGTITDGTNTITFSDIEHLTLSDQADVVNATSATERISIDLGAGD 527
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-----ENAIIVYDANE 332
D + ++ G+D + G DT A + + A
Sbjct: 528 DSLTDGDGDDSIIAGDGDDFIMANDGNDTIEGGAGDDDIEGGGGADSIDGGDGNDFIAGY 587
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
++ ER+ D L A + L+ G D +
Sbjct: 588 DVAGLAANSERVNTDDGA--------NDTLSGGAGEDTLLGGAGDDDLDGGADNDTLKGG 639
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
G D ++ + + A + G + N D Y S +L
Sbjct: 640 TGNDSLTGGDGDDTFVYNVGDGLDTITDFNAGNSGDLGDGDPTNNDFIDLSAYYDSIREL 699
Query: 453 INAFADAP 460
F D
Sbjct: 700 RADFEDDG 707
>gi|119384532|ref|YP_915588.1| Allergen V5/Tpx-1 family protein [Paracoccus denitrificans PD1222]
gi|119374299|gb|ABL69892.1| Allergen V5/Tpx-1 family protein [Paracoccus denitrificans PD1222]
Length = 421
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 5/188 (2%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+ N ND + + + D G ++ ++ G
Sbjct: 180 TFNGELFVTPGPAQNTPRNDDYRLTARHDVASGGNGNDWMEGRAGRDTLNGNAGHDRLIG 239
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
N Y + T+ + G D L GG N + ++ G
Sbjct: 240 GAGFDSLNGGYG-NDTLQGGDGNDTLVGAAGRDQL----RGGAGNDTLWGGAGYDTLLGG 294
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + + G SGND + G + N+ GNDV +G G D F + +
Sbjct: 295 PGADKLDGGAGNDWLRGESGNDTLTGRAGNDTLHGGYGNDVLNGGYGADAFIFRSGHGAD 354
Query: 317 KIYRFENA 324
IY ++
Sbjct: 355 TIYGYQQG 362
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 56/203 (27%), Gaps = 44/203 (21%)
Query: 196 GAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G + + N+ Y++ + G D L+ G + + + S
Sbjct: 190 GPAQNTPRNDDYRLTARHDVASGGNGNDWMEGRAGRDTLN----GNAGHDRLIGGAGFDS 245
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N T+ +++VG++G D + G + N+ + +G D G G D
Sbjct: 246 LNGGYGNDTLQGGDGNDTLVGAAGRDQLRGGAGNDTLWGGAGYDTLLGGPGADKL----- 300
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
D+L L A + L
Sbjct: 301 -----------------DGGAGNDWLRG---------------ESGNDTLTGRAGNDTLH 328
Query: 373 QVIGQDVFESMKHFYEFGLSEGR 395
G DV F G
Sbjct: 329 GGYGNDVLNGGYGADAFIFRSGH 351
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 4/130 (3%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
T+ G+D L +G ++ G T+ +
Sbjct: 244 DSLNGGYGNDTLQGGDGNDTL----VGAAGRDQLRGGAGNDTLWGGAGYDTLLGGPGADK 299
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GND + G S N+ +GND G G D + + A +Y
Sbjct: 300 LDGGAGNDWLRGESGNDTLTGRAGNDTLHGGYGNDVLNGGYGADAFIFRSGHGADTIYGY 359
Query: 331 NEHKQDFLSD 340
+ L
Sbjct: 360 QQGLDRLLIG 369
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 32/128 (25%), Gaps = 37/128 (28%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G +GND + G + + ++G+D G +G D+
Sbjct: 208 DVASGGNGNDWMEGRAGRDTLNGNAGHDRLIGGAGFDSL--------------------- 246
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ D L L A + L G D +
Sbjct: 247 -NGGYGNDTLQG---------------GDGNDTLVGAAGRDQLRGGAGNDTLWGGAGYDT 290
Query: 389 FGLSEGRD 396
G D
Sbjct: 291 LLGGPGAD 298
Score = 37.8 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 44/208 (21%), Gaps = 48/208 (23%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
TA ++ G D E + G D
Sbjct: 198 NDDYRLTARHDVASGGNGNDWMEGRAGRDTLNGNAGHDRLI------------------- 238
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
F +L ++ L + + G+D
Sbjct: 239 -----------------GGAGFDSLNGGYGNDTLQGGDGNDTLVGAAGRDQLRGG----- 276
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
D+ YD L G+D+ G R L A ++ L
Sbjct: 277 --AGNDTLWGGAGYDTLLGGPGADKLD-----GGAGNDWLRGESGNDTLTGRAGNDTLHG 329
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ + G D F +I
Sbjct: 330 GYGNDVLNGGYGADAFIFRSGHGADTIY 357
>gi|327277063|ref|XP_003223285.1| PREDICTED: matrix metalloproteinase-19-like [Anolis carolinensis]
Length = 475
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 60/203 (29%), Gaps = 48/203 (23%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET- 73
+LL + W + Y+ + + + + A WS V LTF+E
Sbjct: 102 KYLLLGR-WRKRHLTYRLYSHSEDMGA-------AATRTAIKTAFKYWSDVTRLTFQEVR 153
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYF-----------MEINFDKADVWRYGIGKGTILSH 122
+ +DI+ + R ++FD A+ W G +G L
Sbjct: 154 TGRADIRLAFHGSSPWGCSRPFDGPGHVLAHADIPELGTVHFDSAEHWTEGTPRGVNLRI 213
Query: 123 NALHEIGHALGLMHP-GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HEIGHALGL H P Y
Sbjct: 214 IAAHEIGHALGLGHSRHPTALMAPSYSGYRPRFRLHHD---------------------- 251
Query: 182 TPMVSDIVAVQKIYGAPKGSLGN 204
DI +Q +YG S
Sbjct: 252 -----DIEGIQALYGKKTLSTTT 269
>gi|17230146|ref|NP_486694.1| hypothetical protein all2654 [Nostoc sp. PCC 7120]
gi|17131747|dbj|BAB74353.1| all2654 [Nostoc sp. PCC 7120]
Length = 1417
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 62/210 (29%), Gaps = 26/210 (12%)
Query: 222 IYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ GDD L +L G N I + G + + +++ G +G
Sbjct: 1212 PVGTSGDDTLIGTDEEESLFGNGGNDILYARGGDDKLFGGAGDDLLDGGEGNDALFGGAG 1271
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
D ++G + N+ +G+++ DG G D + + I+Y +
Sbjct: 1272 TDTLLGGAGNDYLTGGTGDNLLDGGDGNDLLY--GNGGQDTLLGGAGDDIIYSGS----- 1324
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
I+ + ++ G + G G
Sbjct: 1325 ------------GDDLINGGLGNDIIFLNGGQDTIVVAQGAGIDTINNFQVSLGQKVGLS 1372
Query: 397 --ITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
ITF+ + S D G + A +
Sbjct: 1373 GGITFEQLTFSQSGLDTLIQVGDEALAVLK 1402
>gi|189220034|ref|YP_001940674.1| glycosyltransferase [Methylacidiphilum infernorum V4]
gi|189186892|gb|ACD84077.1| Glycosyltransferase [Methylacidiphilum infernorum V4]
Length = 826
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 20/124 (16%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD Y+ D+ R A RHY G NP+ F Y+ + +++
Sbjct: 478 FDPDFYILQAPDVS------REEALRHYFREGYIADLNPNPYFDTAYYVKQNPEVVQQ-K 530
Query: 542 DAPDLVQAGKDHFSNFGY--EEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
P + HF G S F+ YL Y ++ H++ G
Sbjct: 531 INPLI------HFIEKGALNRRNPSPYFDIQYYLEQYPEV----AEQNLNPLSHFLIQGR 580
Query: 600 KEGR 603
KEGR
Sbjct: 581 KEGR 584
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 43/125 (34%), Gaps = 20/125 (16%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD Y+ D+ R A RHY G NP+ F Y+ + +++
Sbjct: 477 LFDPDFYILQAPDVS------REEALRHYFREGYIADLNPNPYFDTAYYVKQNPEVVQQK 530
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ HF G R + FD YL Y ++ H++ G
Sbjct: 531 INP-------LIHFIEKGALNRRNPSPYFDIQYYLEQYPEVAEQ----NLNPLSHFLIQG 579
Query: 515 VKEGR 519
KEGR
Sbjct: 580 RKEGR 584
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 25/88 (28%), Gaps = 15/88 (17%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY--EEGRSITFNPDLYLTSY 576
+ F YI D+ + H+ GY + + F+ Y+
Sbjct: 473 LELNLFDPDFYILQAPDVS---------REEALRHYFREGYIADLNPNPYFDTAYYVKQN 523
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRA 604
++ + H+I G R
Sbjct: 524 PEVVQ----QKINPLIHFIEKGALNRRN 547
>gi|288939975|ref|YP_003442215.1| hypothetical protein Alvin_0216 [Allochromatium vinosum DSM 180]
gi|288895347|gb|ADC61183.1| hypothetical protein Alvin_0216 [Allochromatium vinosum DSM 180]
Length = 132
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 28/87 (32%), Gaps = 13/87 (14%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSY 576
R F Y++ + D+ A +H+ G +E R F+ YL
Sbjct: 51 RESGLFDEAWYLSQYPDVAAA-------GYDAIEHYVCHGIQENRHPAPWFDTAFYLERN 103
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGR 603
D+ N HY G E R
Sbjct: 104 PDVANSI----MNPLVHYHQFGKAERR 126
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL Y D+ A HY+ HG++E R+P F Y+ + D+ N+
Sbjct: 56 FDEAWYLSQYPDVAAAG----YDAIEHYVCHGIQENRHPAPWFDTAFYLERNPDVANSI- 110
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
P + H+ FG E R
Sbjct: 111 MNPLV------HYHQFGKAERR 126
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 12/85 (14%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD YL Y D+ A HY+ HG++E R+P F Y+ + D+ N+
Sbjct: 55 LFDEAWYLSQYPDVAAA----GYDAIEHYVCHGIQENRHPAPWFDTAFYLERNPDVANSI 110
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFV 481
+ H+ FG E R
Sbjct: 111 MNP-------LVHYHQFGKAERRPT 128
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 13/87 (14%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
R F Y++ + D+ A D +H+ G +E R FD+ YL
Sbjct: 51 RESGLFDEAWYLSQYPDVAAAGYD-------AIEHYVCHGIQENRHPAPWFDTAFYLERN 103
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGR 519
D+ N + HY G E R
Sbjct: 104 PDVANSIMN----PLVHYHQFGKAERR 126
>gi|303245322|ref|ZP_07331606.1| peptidase S8 and S53 subtilisin kexin sedolisin [Desulfovibrio
fructosovorans JJ]
gi|302493171|gb|EFL53033.1| peptidase S8 and S53 subtilisin kexin sedolisin [Desulfovibrio
fructosovorans JJ]
Length = 696
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 70/173 (40%), Gaps = 12/173 (6%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDS--PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+YGA +Y E + P + D G D ++ + + + L + S
Sbjct: 511 LYGAAATDDTRYVYTNEYGTYAAQDPSRTLLVDLTGTDTINASPVTAGSA-VTLAPGTVS 569
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---- 307
I G + +A T IE++ GND+++ N A+N + G+DV G D+
Sbjct: 570 LIDGAA--VVLAPLTTIENLATGDGNDLLVDNDADNSLYGGRGDDVLMTGRGDDSLDGGP 627
Query: 308 ---FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
P+ + ++ +++ +++VE L FAD+ + + +
Sbjct: 628 GFDVVGFPNIYADYTIGTDTGVLTVSSQAGVKTIANVEALSFADRVVPATDAL 680
Score = 42.9 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 26/89 (29%)
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT + + + + D L+ +E L D V+ + L
Sbjct: 546 GTDTINASPVTAGSAVTLAPGTVSLIDGAAVVLAPLTTIENLATGDGNDLLVDNDADNSL 605
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ L+ G D + F G
Sbjct: 606 YGGRGDDVLMTGRGDDSLDGGPGFDVVGF 634
>gi|26249405|ref|NP_755445.1| hemolysin A [Escherichia coli CFT073]
gi|26109813|gb|AAN82018.1|AE016766_106 Hemolysin A [Escherichia coli CFT073]
Length = 1024
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 44/151 (29%), Gaps = 25/151 (16%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + N + +++ G +G+D + G N+ +GN
Sbjct: 732 FGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGGTGN 791
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D S +V L
Sbjct: 792 NYLNGGDGDDELQVQGNS-----------------------LAKNV--LSGGKGNDKLYG 826
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ +L+ + L G D++ + +
Sbjct: 827 SEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 37.8 bits (86), Expect = 6.0, Method: Composition-based stats.
Identities = 42/249 (16%), Positives = 70/249 (28%), Gaps = 14/249 (5%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------APSYLYKIYRFENAIIV 327
G+D V ++ + + G+DV DT + + Y + R +
Sbjct: 617 GDGDDKVFLSAGSANIYAGKGHDVVYY-DKTDTGYLTIDGTKATEAGNYTVTRVLGGDVK 675
Query: 328 YDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E + E+ ++ +N K + + S E+LI D F K
Sbjct: 676 ILQEVVKEQEVSVGKRTEKTQYRSYEFTHINGKNLTETDNLYSVEELIGTTRADKFFGSK 735
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
F ++G D + Y D N + Y G + L
Sbjct: 736 FTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGGTGNNYLN 795
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
++L V G EG D D L+ +G+D
Sbjct: 796 GGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGA----DLLDGGEGNDLLKGGYGNDIY 851
Query: 505 AAARHYITH 513
Y H
Sbjct: 852 RYLSGYGHH 860
>gi|301017935|ref|ZP_07182560.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 69-1]
gi|300399930|gb|EFJ83468.1| type I secretion target GGXGXDXXX repeat-containing domain protein
[Escherichia coli MS 69-1]
Length = 1024
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 44/151 (29%), Gaps = 25/151 (16%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + N + +++ G +G+D + G N+ +GN
Sbjct: 732 FGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGGTGN 791
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D S +V L
Sbjct: 792 NYLNGGDGDDELQVQGNS-----------------------LAKNV--LSGGKGNDKLYG 826
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ +L+ + L G D++ + +
Sbjct: 827 SEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 37.8 bits (86), Expect = 6.1, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 78/287 (27%), Gaps = 24/287 (8%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------APSYLYKIYRFENAIIV 327
G+D V ++ + + G+DV DT + + Y + R +
Sbjct: 617 GDGDDKVFLSAGSANIYAGKGHDVVYY-DKTDTGYLTIDGTKATEAGNYTVTRVLGGDVK 675
Query: 328 YDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E + E+ ++ +N K + + S E+LI D F K
Sbjct: 676 ILQEVVKEQEVSVGKRTEKTQYRSYEFTHINGKNLTETDNLYSVEELIGTTRADKFFGSK 735
Query: 385 HFYEFGLSEGRD----ITFDSYLYLGSYDDLRNV-------FGSDRGAAARHYITHGVKE 433
F ++G D + LY +D +G D +
Sbjct: 736 FTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLRGGNGDDQLYGGDGNDKLIGGTGNNYLN 795
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV---TFDSYLYLG 490
G + D ++ + +++++ L + G D Y YL
Sbjct: 796 GGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLS 855
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
Y + + + Y A L
Sbjct: 856 GYGHHIIDDDGGKDDKLSLADIDFRDVAFRREDNDLIMYKAEGNVLS 902
>gi|149202706|ref|ZP_01879678.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
gi|149143988|gb|EDM32022.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
Length = 573
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 57/337 (16%), Positives = 94/337 (27%), Gaps = 42/337 (12%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ + GDDL+DL G + ++ + G + +I + V G+D V
Sbjct: 20 VDGTAGDDLIDL-GYAGDPDGDFVDNDDALLPGAAPNDDSIRAGAGDDVVFAGVGDDQVD 78
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G ++ F G+D DG +G DT + + V D +D
Sbjct: 79 GADGADLIFGEDGSDTIDGGAGNDTIDSGTSTSTLPLPDLGFGTTV----PADLDPENDR 134
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ + D + A + + I DV + SEG D
Sbjct: 135 DLVFGGDGDDVITTGDDADTISGGAGADLIDGGIDADVIDGDDGNDTLIGSEGSDTING- 193
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
G+ DD+ G++EG D IN
Sbjct: 194 ----GAGDDVIFG---------------GLEEG--------------FPDSINIPDATDP 220
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
G+D + F D LG D G D G
Sbjct: 221 EPGNGRDLIDGGDGNDTIFGQDDDDTILGGAGDDVIDGGIDNDFIV---GADGNDSLIGG 277
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
+ A ++ + + +D F + G
Sbjct: 278 QGDDTITGGAGNDTISGGLGADRLVGLDDRDVFVDVG 314
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/223 (13%), Positives = 56/223 (25%), Gaps = 48/223 (21%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE--------------------SWSSIG 254
TI G+D +D DL I
Sbjct: 88 GEDGSDTIDGGAGNDTIDSGTSTSTLPLPDLGFGTTVPADLDPENDRDLVFGGDGDDVIT 147
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------ 308
+ TI+ + + G DV+ G+ N+ S G+D +G +G D F
Sbjct: 148 TGDDADTISGGAGADLIDGGIDADVIDGDDGNDTLIGSEGSDTINGGAGDDVIFGGLEEG 207
Query: 309 ---------------------YYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRF 346
I+ ++ + D D + +
Sbjct: 208 FPDSINIPDATDPEPGNGRDLIDGGDGNDTIFGQDDDDTILGGAGDDVIDGGIDNDFIVG 267
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
AD + + + A + + +G D + F
Sbjct: 268 ADGNDSLIGGQGDDTITGGAGNDTISGGLGADRLVGLDDRDVF 310
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/247 (17%), Positives = 70/247 (28%), Gaps = 14/247 (5%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
D+ F + V F E D D + S + L
Sbjct: 60 RAGAGDDVVFAGVGDDQVDGADGADLIFGEDGSDTIDGGAGNDTIDSGTSTSTLPLPDLG 119
Query: 132 LGLMHPGSYNGGYP---VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
G P + V+G D D + + ++D
Sbjct: 120 FGTTVPADLDPENDRDLVFGGDGDDVITTGDDADTISGGAGADLIDGGIDADVIDGDDGN 179
Query: 189 VAVQKIYGAPKGS--LGNNIYKIE-----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+ G+ + G+++ + P G DL+D GG N
Sbjct: 180 DTLIGSEGSDTINGGAGDDVIFGGLEEGFPDSINIPDATDPEPGNGRDLID----GGDGN 235
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ +I G + I + +VG+ GND +IG ++ +GND G
Sbjct: 236 DTIFGQDDDDTILGGAGDDVIDGGIDNDFIVGADGNDSLIGGQGDDTITGGAGNDTISGG 295
Query: 302 SGLDTFF 308
G D
Sbjct: 296 LGADRLV 302
>gi|86139958|ref|ZP_01058523.1| secreted hemolysin-type calcium-binding bacteriocin, putative
[Roseobacter sp. MED193]
gi|85823376|gb|EAQ43586.1| secreted hemolysin-type calcium-binding bacteriocin, putative
[Roseobacter sp. MED193]
Length = 3377
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/370 (13%), Positives = 103/370 (27%), Gaps = 38/370 (10%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTP----RYDSRYFMEINFDKADVWRYGIGKGTIL 120
+ +LTF ++ N G P Y +E N +
Sbjct: 2979 ISNLTF--------GDIVTRNTGMTDLPQDVFSYTGDEIVEDNGTADQQTQQPPVTDDAG 3030
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
+ N G + G G + D + Q + AS
Sbjct: 3031 NANQAD----------TGQDDTGQDDNGQGQTAQGDDTQGEMTVDNSTQTAQGGASAD-- 3078
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
P+ +D + G + ++ G DL D +
Sbjct: 3079 QEPVSNDDDTIDG--GDSSDADTETPASDPSTEQSPNGSDEGLVKSGTDLGDALVGAAGD 3136
Query: 241 NYIDLNTE--------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ + + + G + + + ++G +G+D +IG +++
Sbjct: 3137 DILSGHEGNDMLVGNAGDDMLFGGDGRDDMLGGDGADMLMGGAGSDNIIGGDGDDMIIGG 3196
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----DVERLRFAD 348
SG+D+ G++G DTF Y E + + A+ + +R
Sbjct: 3197 SGSDILMGNAGDDTFIGTDGDCNDIYYGGEGSDTIDMASVTSNLTVRLGNAGTDRGSVTT 3256
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ + + + + +V + F + D L +
Sbjct: 3257 EEGGRDTIWSVENFVGGSGDDTIFASDAANVLDGGDGNNTFVFETAANAQGDHINGLSAG 3316
Query: 409 DDLRNVFGSD 418
D L+ GSD
Sbjct: 3317 DLLQFGTGSD 3326
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 63/199 (31%), Gaps = 20/199 (10%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+G D + N + N +GG ++ + +++ G +G+D++IG+S
Sbjct: 1420 TGTGDAPLVDGAREYDNLLKFNGGEHVVLGGTDQRDILVGGLGDDALWGGAGDDLLIGDS 1479
Query: 285 ANNVFFESSGNDVF---------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
N F GND+ G G D + N I+ ++ K
Sbjct: 1480 GVNTFRGGDGNDIIKDGDDISFLHGEDGDDVISAGGGAAELIFGGRGNDAILMGRDDAKH 1539
Query: 336 DFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQ----------VIGQDVFESMK 384
F F + +E ++ L+ VIG DV
Sbjct: 1540 TFAGMGNDFVFGGSGADIVDGGEGDDWIEGGDGFDFLVGDNNDNLGGSRVIGHDVLMGGA 1599
Query: 385 HFYEFGLSEGRDITFDSYL 403
+ + G DI F
Sbjct: 1600 NDNDLHGESGDDILFQGEG 1618
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 50/184 (27%), Gaps = 20/184 (10%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ L G + I + ++ G + + + + + G GND++ +
Sbjct: 1446 VVLGGTDQRDILVGGLGDDALWGGAGDDLLIGDSGVNTFRGGDGNDIIKDGDDISFLHGE 1505
Query: 293 SGNDVF----------DGSSGLDTFFYYAPSYLYKIYR------FENAIIVYDANEHKQD 336
G+DV G G D + F + D
Sbjct: 1506 DGDDVISAGGGAAELIFGGRGNDAILMGRDDAKHTFAGMGNDFVFGGSGADIVDGGEGDD 1565
Query: 337 FLSDVERLRFADQCIDSVNVK----QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
++ + F + +L A+ DL G D+ + +
Sbjct: 1566 WIEGGDGFDFLVGDNNDNLGGSRVIGHDVLMGGANDNDLHGESGDDILFQGEGTHVNLAE 1625
Query: 393 EGRD 396
G D
Sbjct: 1626 LGYD 1629
Score = 50.6 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 47/187 (25%), Gaps = 28/187 (14%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G+++ + D + + I + I G N
Sbjct: 1470 AGDDLLIGDSGVNTFRGGDGNDIIKDGDDISFLHGEDGDDVISAGGGAAELIFGGRGNDA 1529
Query: 262 I-AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + GND V G S ++ G+D +G G D
Sbjct: 1530 ILMGRDDAKHTFAGMGNDFVFGGSGADIVDGGEGDDWIEGGDGFD------------FLV 1577
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+N + + D L + + L + + L Q G V
Sbjct: 1578 GDNNDNLGGSRVIGHDVL---------------MGGANDNDLHGESGDDILFQGEGTHVN 1622
Query: 381 ESMKHFY 387
+ +
Sbjct: 1623 LAELGYD 1629
Score = 45.5 bits (106), Expect = 0.027, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 50/171 (29%), Gaps = 9/171 (5%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
G T + D+ A Y + G+ + I + L D T
Sbjct: 1809 GQEGDVDTAVYFDVRAN---YSIRANADGSVTVDHINVTEGPNPIDPVNGDPNPILGDGT 1865
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ N I + + GS+G D + + ++ +G
Sbjct: 1866 DRLTGIEILRFADMEIDLRTNPANNGLIQGTGGNDVLDGSNGPDAIFAGAGDDAINGLAG 1925
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRF------ENAIIVYDANEHKQDFLS 339
NDV G G DT + AP Y + ++ + +D +
Sbjct: 1926 NDVIFGEGGSDTITWNAPLGGYDVVVGHGIVNDGGTDMLVINGDGTEDGFT 1976
>gi|291567822|dbj|BAI90094.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 1503
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 46/164 (28%), Gaps = 19/164 (11%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
++ + L TE I + T+ + + G+ GND + GN N+ +
Sbjct: 49 VSSEPTENSDFILGTEFDDIIFALGGDDTVYGLDGDDIIGGNEGNDFLHGNQGNDTLYGG 108
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
G+D G G D F L F + D L
Sbjct: 109 QGDDTLRGGKGNDVLFGDRGDDLL----FGDRDHDTLFGNQGNDTL-------------- 150
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ +L + L G D + EG +
Sbjct: 151 -YGGQGNDLLYGGKGDDLLFGDRGNDTLIGDEGSDTLTGGEGNN 193
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 51/140 (36%), Gaps = 13/140 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ F I+ GGDD + G + I E + G + N T+ +
Sbjct: 57 SDFILGTEFDDIIFALGGDDTV----YGLDGDDIIGGNEGNDFLHGNQGNDTLYGGQGDD 112
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFE 322
++ G GNDV+ G+ +++ F +D G+ G DT + Y ++
Sbjct: 113 TLRGGKGNDVLFGDRGDDLLFGDRDHDTLFGNQGNDTLYGGQGNDLLYGGKGDDLLFGDR 172
Query: 323 NAIIVYDANEHKQDFLSDVE 342
+ + D L+ E
Sbjct: 173 GNDTLI--GDEGSDTLTGGE 190
Score = 42.5 bits (98), Expect = 0.21, Method: Composition-based stats.
Identities = 14/165 (8%), Positives = 35/165 (21%)
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
P + N+I V + + + + + + + + + +
Sbjct: 28 PISTATGIQAHNSITVLTLGQVSSEPTENSDFILGTEFDDIIFALGGDDTVYGLDGDDII 87
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D + +G D + D + + G
Sbjct: 88 GGNEGNDFLHGNQGNDTLYGGQGDDTLRGGKGNDVLFGDRGDDLLFGDRDHDTLFGNQGN 147
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
L + L + + G D +
Sbjct: 148 DTLYGGQGNDLLYGGKGDDLLFGDRGNDTLIGDEGSDTLTGGEGN 192
>gi|325958965|ref|YP_004290431.1| family 2 glycosyl transferase [Methanobacterium sp. AL-21]
gi|325330397|gb|ADZ09459.1| glycosyl transferase family 2 [Methanobacterium sp. AL-21]
Length = 770
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 13/86 (15%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYD 577
+ + F Y+ ++ D+ N + DH+ G++E R + F+ + YL +Y
Sbjct: 29 SLNLFDKEFYLTNYPDIRNTNINP-------LDHYIYHGWKEKRVPSTKFDGNYYLKNYS 81
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGR 603
D+ HY+ +G KEGR
Sbjct: 82 DVRK----SEVNPLIHYVVYGKKEGR 103
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 14/102 (13%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFA 541
FD YL +Y D+RN HYI HG KE R P F Y+ ++ D+ +
Sbjct: 33 FDKEFYLTNYPDIRNT----NINPLDHYIYHGWKEKRVPSTKFDGNYYLKNYSDVRKSE- 87
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSY--DDLWN 581
P + H+ +G +EGR + ++ T Y DL N
Sbjct: 88 VNPLI------HYVVYGKKEGRFPNHHAEINSTEYIIKDLKN 123
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
++ + F Y+ ++ D+ N + DH+ G +E R + FD YL +Y
Sbjct: 28 KSLNLFDKEFYLTNYPDIRNTNINP-------LDHYIYHGWKEKRVPSTKFDGNYYLKNY 80
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
D+R HY+ +G KEGR P+
Sbjct: 81 SDVRKS----EVNPLIHYVVYGKKEGRFPN 106
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD YL +Y D+RN HYI HG KE R P F Y+ ++ D+ +
Sbjct: 32 LFDKEFYLTNYPDIRNTN----INPLDHYIYHGWKEKRVPSTKFDGNYYLKNYSDVRKSE 87
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ H+ +G +EGRF
Sbjct: 88 VNP-------LIHYVVYGKKEGRFPN 106
Score = 45.2 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 12/102 (11%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++ R+ A + I S+N Y +Y D I + H+ G E R +
Sbjct: 15 KNIYRIIKAQKLIKSLN--LFDKEFYLTNYPD----IRNTNINPLDHYIYHGWKEKRVPS 68
Query: 399 --FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
FD YL +Y D+R HY+ +G KEGR P+
Sbjct: 69 TKFDGNYYLKNYSDVRKSE----VNPLIHYVVYGKKEGRFPN 106
Score = 44.8 bits (104), Expect = 0.047, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
F+ + YLT+Y D+ N HYI HG KE R
Sbjct: 33 FDKEFYLTNYPDIRN----TNINPLDHYIYHGWKEKRV 66
>gi|317419770|emb|CBN81806.1| Matrix metalloproteinase-16 [Dicentrarchus labrax]
Length = 591
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 56/205 (27%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T + + R A W V L FE
Sbjct: 104 LTGQKWQHKHITYSIKNVTPKVGA-------EETHDAIRRAFDVWQNVTPLRFEAVPYSE 156
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 157 LERTKKDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 216
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + D +N
Sbjct: 217 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMDTDN------------------- 257
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
+ D++ +QKIYG P
Sbjct: 258 ------FKLPMDDLLGIQKIYGPPD 276
>gi|218438233|ref|YP_002376562.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7424]
gi|218170961|gb|ACK69694.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7424]
Length = 965
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/423 (13%), Positives = 114/423 (26%), Gaps = 22/423 (5%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ + + + D+ G +I + G NG
Sbjct: 372 NGGAGDDSILGNIGVDTLLGDAGNDIIFGGRDNDSIDGGTENDSLIGGEGTDTLVGGNGN 431
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ G + ++ DS++ S + ++G
Sbjct: 432 DTIIGGLQTADQSGDQGDTITGGDGNDSILGNSGV----DTLLGDGGNDALFGGRDNDTI 487
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + T+ G D + L + + +I G N TI+
Sbjct: 488 DGG-ENDDTLVGGEGTDTLVGGNGADSILGGLQSEAQ-----TGDLADTILGGAGNDTIS 541
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-E 322
+ +++ G + ND + GN + +GND DG G DT + ++
Sbjct: 542 GNLGDDTIDGGADNDRINGNEGADNLLGGTGNDTIDGGVGNDTINSNDAANAGELEVLIG 601
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
A + D + + + + + A + + +G D
Sbjct: 602 GAGADLITAGNGADSIVGGLVVT---GTNTAQTGDEADTINGGAGNDTIFGNLGNDSIVG 658
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
EG D D ++G GAA G
Sbjct: 659 GTGVDSIIGGEGGDTL------TAGDADNNVIYGGFVGAAGSTQTNDGADFITGGAGADQ 712
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
L ++ + A + ++ G + + + G V + + DL +
Sbjct: 713 LFGNLGNDTINGAGGNDSNI--SGGEGSDSLLGDAGADVIYGGFSTGAQTGDLADTILGG 770
Query: 503 RGA 505
G
Sbjct: 771 AGT 773
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/343 (12%), Positives = 80/343 (23%), Gaps = 12/343 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
TI G+D L L + + ++ G N I + +
Sbjct: 173 NDSLVGGEGADTITGGTGNDTLVGGLQTSSQ-----TGDLADNLNGGLGNDVIFGNLGND 227
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+++G G+D++ G N+ + ND G G DT I D
Sbjct: 228 TLIGDIGDDILFGGRDNDTLSGGANNDSLVGGEGADTI--TGDEGDDTIRGGLQTASQSD 285
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + + IL + + QD +
Sbjct: 286 DLADSLLGGLGNDLIFGNLGNDTLLGDVGNDILLGGIGNDSIDGGADQDSLVGGESADTI 345
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G D +D + G + GV + +
Sbjct: 346 TGGAGNDTIIGGLQSGDQSNDEADNINGGAGDDSI-LGNIGVDTLLGDAGNDIIFGGRDN 404
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ + + + G D + + G D +
Sbjct: 405 DSIDGGTENDSLIGGEGTDTLVGGNGNDTIIGGLQTADQSGDQGDTITGGDGNDSIL--- 461
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
GV AL ++ + D + G D
Sbjct: 462 -GNSGVDTLLGDGGNDALFGGRDNDTIDGGENDDTLVGGEGTD 503
Score = 42.1 bits (97), Expect = 0.33, Method: Composition-based stats.
Identities = 63/377 (16%), Positives = 102/377 (27%), Gaps = 39/377 (10%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+Q I + G+DL+ IGG I+ G + N T+A +++ G
Sbjct: 47 NSFTGVQIILANQGNDLISAANIGGFPTTIE--------AYGGQGNDTVAGGNFNDTLYG 98
Query: 274 SSGNDVVIGNSANN--------VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
S G+D + G ++ D DG SG D F +
Sbjct: 99 SEGSDTIQGGGGDDSIGGGLQTTSQTGDLADTIDGGSGNDIIF--GNLGTDSLVGNIGND 156
Query: 326 IVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEY--------TASYEDLIQVIG 376
++ + D D + L + L ++L +G
Sbjct: 157 TIFGGLDGDTIDGGLDNDSLVGGEGADTITGGTGNDTLVGGLQTSSQTGDLADNLNGGLG 216
Query: 377 QDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARH--YITH 429
DV G DI F D+ + D L G+D I
Sbjct: 217 NDVIFGNLGNDTLIGDIGDDILFGGRDNDTLSGGANNDSLVGGEGADTITGDEGDDTIRG 276
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G++ D DLI L+ + G L
Sbjct: 277 GLQTASQSDDLADSLLGGLGNDLIFGNLGNDTLLGDVGNDILLGGIGNDSIDGGADQDSL 336
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
+ + G + G + D + A + ++ L A
Sbjct: 337 VGGESADTITGGAGNDTIIGGLQSGDQSNDEADN---INGGAGDDSILGNIGVDTLLGDA 393
Query: 550 GKDHFSNFGYEEGRSIT 566
G D FG + SI
Sbjct: 394 GND--IIFGGRDNDSID 408
>gi|254425455|ref|ZP_05039172.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
gi|196187878|gb|EDX82843.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
Length = 738
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 65/214 (30%), Gaps = 7/214 (3%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
D + V Y P GS Y + T + + G+D L GG I
Sbjct: 474 FDDLIVGAPYADPNGSGSGESYVVFGAADIDSNTSTRFGTNGNDTLI----GGKNKDILF 529
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G + T+ +++ G +GND +IG + N+ GND DG G D
Sbjct: 530 GLAGNDFLDGSNGDDTLDGGRGRDTLFGGNGNDTLIGRADNDTLDGGKGNDTLDGGKGND 589
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEY 364
T ++ + ++ D + L R L
Sbjct: 590 TL--DGGRGRDVLFGGNGNDTLIGRADNDTLDGGKGNDLLDGGRGNDLLTGGSGRDFLLG 647
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ ++ D F LS G I
Sbjct: 648 NDGDDTIVGGGNNDTLTGGNGRDTFVLSLGNGID 681
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/257 (17%), Positives = 71/257 (27%), Gaps = 22/257 (8%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL- 230
DA FG D + G F I + D
Sbjct: 428 GTDAGFGAVFELSSIDGSNGFVLTGIDTDDSSGFSVSGAGDINGDGFDDLIVGAPYADPN 487
Query: 231 ---LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+ + ID NT S+ G N T+ + + G +GND + G++ ++
Sbjct: 488 GSGSGESYVVFGAADIDSNT---STRFGTNGNDTLIGGKNKDILFGLAGNDFLDGSNGDD 544
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
G D G +G DT + + + + D + L
Sbjct: 545 TLDGGRGRDTLFGGNGNDTLI--GRADNDTLDGGKGNDTL--------DGGKGNDTLDGG 594
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSY 402
L A + L G D+ + + GRD D+
Sbjct: 595 RGRDVLFGGNGNDTLIGRADNDTLDGGKGNDLLDGGRGNDLLTGGSGRDFLLGNDGDDTI 654
Query: 403 LYLGSYDDLRNVFGSDR 419
+ G+ D L G D
Sbjct: 655 VGGGNNDTLTGGNGRDT 671
Score = 58.3 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 54/165 (32%), Gaps = 6/165 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T+ G+D LD L GG N + ++ G + N +
Sbjct: 570 NDTLDGGKGNDTLDGGKGNDTLDGGRGRDVLFGGNGNDTLIGRADNDTLDGGKGNDLLDG 629
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G SG D ++GN ++ ND G +G DTF + + I F+
Sbjct: 630 GRGNDLLTGGSGRDFLLGNDGDDTIVGGGNNDTLTGGNGRDTFVLSLGNGIDTITDFDTK 689
Query: 325 IIVYDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEYTASY 368
++ LS + + +D + +S
Sbjct: 690 DLIGLTGGLSLGALSFIGSDILISDTSEVLATLTGIDTTSLNSSR 734
>gi|237798854|ref|ZP_04587315.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|237806170|ref|ZP_04592874.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331021708|gb|EGI01765.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331027283|gb|EGI07338.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 1498
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/311 (14%), Positives = 85/311 (27%), Gaps = 19/311 (6%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL SS + A + G+S +D ++G+++N++ G D G G
Sbjct: 1201 DLGYCGDSSDNNDPARIFDAGQNEGGHIFGTSDDDTLVGSASNDILDGDQGADDMTGGDG 1260
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L I+ R+++
Sbjct: 1261 NDIYVVDNALDTVTESNDSPSQVDTVVSSVSWTLGANVENLLLTGVSAINGTGNALRNVM 1320
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
A+ L G D+ + + + + + D + +A
Sbjct: 1321 TGNANNNVLDGGAGADLLTGGDGSDSYY------VDDAADRVVETNADKQIGGTDTVYSA 1374
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRF 480
Y E A A + D L D + G D S G
Sbjct: 1375 LSSYTLGANLENIVITASGAANATGNTLDNVLYAGTGDNVLDGRDGNDTVSYLFATAGVT 1434
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF---KALEYIASHEDLI 537
V ++ ++ GS G + + L ++ L
Sbjct: 1435 VALNTSA-------VQTTGGSGLDTIKGTENLSGSQFADSLTGNKNANVLNGGNGNDTLS 1487
Query: 538 NAFADAPDLVQ 548
D +
Sbjct: 1488 GGAGDDVLIGG 1498
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 60/208 (28%), Gaps = 14/208 (6%)
Query: 190 AVQKIYGAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTL-------IGGV 239
A Q G G+ ++ + G+D+ +
Sbjct: 1220 AGQNEGGHIFGTSDDDTLVGSASNDILDGDQGADDMTGGDGNDIYVVDNALDTVTESNDS 1279
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ +D S S G + + G++ +V+ GN+ NNV +G D+
Sbjct: 1280 PSQVDTVVSSVSWTLGANVENLLLTGVSAINGTGNALRNVMTGNANNNVLDGGAGADLLT 1339
Query: 300 GSSGLDTFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVN 355
G G D+++ + + + +++E + ++
Sbjct: 1340 GGDGSDSYYVDDAADRVVETNADKQIGGTDTVYSALSSYTLGANLENIVITASGAANATG 1399
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESM 383
++L L G D +
Sbjct: 1400 NTLDNVLYAGTGDNVLDGRDGNDTVSYL 1427
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 72/237 (30%), Gaps = 6/237 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + N TI E ++G +G D V G + +++ +G D G +G DTF +
Sbjct: 383 TVQGTDANDTITGGAANELILGLAGKDTVNGGAGDDILVGGAGADKLTGGAGADTFRFDQ 442
Query: 312 PSYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ Y+ +V D + LS++ ++N+ + L+ T
Sbjct: 443 LTDSYRTATSSATDLVSDFDISQDRIDLSNLSFTGLGSGKAGTLNISYNATLDRTYIKSL 502
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G + + L+ I D L G+D G
Sbjct: 503 DADASGNRFELGLNGNLKDTLNASHFIFQRVAEGTAGGDTLTGTEGNDIIN-----GNAG 557
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
L A + L + D + N+ + +
Sbjct: 558 ADRINGGAGADTLTGGADADILTGGAGADVFIYTSRLDSYRNYNASGTKQSDTITDF 614
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 60/493 (12%), Positives = 126/493 (25%), Gaps = 26/493 (5%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
T + + + D G G ++ ++ G +
Sbjct: 382 VTVQGTDANDTITGGAANELILGLAGKDTVNGGAGDDILVGGAGADKLTGGAGAD-TFRF 440
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ Y D +S S + + +I +
Sbjct: 441 DQLTDSYRTATSSATDLVSDFDISQDRIDLSNLSFTGLGSGKAGTLNI--------SYNA 492
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+L K + + D L+ + + T ++ G E N
Sbjct: 493 TLDRTYIKSLDADASGNRFELGLNGNLKDTLNASHFIF--QRVAEGTAGGDTLTGTEGND 550
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + + + G +G D + G + ++ +G DVF +S LD++ Y S +
Sbjct: 551 IINGNAGADRINGGAGADTLTGGADADILTGGAGADVFIYTSRLDSYRNYNASGTKQSDT 610
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ D + L D +++ + + T + + G
Sbjct: 611 ITDFNTAEDRIDLSSIGLRG-----LGDGSANTIYLSLNADGSKTYVKTNAVDTTGNRFE 665
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+++ G + F S L + +
Sbjct: 666 IALEGNL-LGKLSDSNFIFSSASATNQPPVLNTPLMDQNVTELNAFSYAVQPGSFSDPDS 724
Query: 441 KALEYIASHEDLINAFA----DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
AL Y A+ D D+ L G + G D+ +
Sbjct: 725 TALTYSATLADNSALPDWLKFDSKTLTFSGTPGGTASGLYSVLLTASDATGASVADSFAI 784
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
V G + + L + + L D AG+D +
Sbjct: 785 IVGNVAPGILTGTEN---AEALYGTEGNDTLLGLGGDDTLRGDTGDDVINGGAGRD--AL 839
Query: 557 FGYEEGRSITFNP 569
+G + + ++
Sbjct: 840 YGGADADTFVYSA 852
Score = 50.6 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 50/149 (33%), Gaps = 5/149 (3%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ D A+ S + K + + SG +L
Sbjct: 716 PGSFSDPDSTALTYSATLADNSALPDWLKFDSKTLTFSGTPGGTASGLYSVLLTASDATG 775
Query: 240 KNY-----IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ I + + + G E + ++++G G+D + G++ ++V +G
Sbjct: 776 ASVADSFAIIVGNVAPGILTGTENAEALYGTEGNDTLLGLGGDDTLRGDTGDDVINGGAG 835
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
D G + DTF Y A + Y+ Y
Sbjct: 836 RDALYGGADADTFVYSALTDSYRDYDAGG 864
Score = 42.1 bits (97), Expect = 0.28, Method: Composition-based stats.
Identities = 35/274 (12%), Positives = 77/274 (28%), Gaps = 42/274 (15%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE N + + S + E + + N
Sbjct: 1262 DIYVVDNALDTVTESNDS-PSQVDTVVSSVSWTLGANVENLLLTGVSAINGTGNALRNVM 1320
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ + AD+ G G +
Sbjct: 1321 TGNANNNVLDGGAGADLLTGGDGSDSY--------------------------------- 1347
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
Y +D+ V + Q D + ++ + + I + + N ++
Sbjct: 1348 YVDDAADRVVETNADKQIGGTDTVYSALSSYTLGANLENIVITASGAANATGNT--LDNV 1405
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY-----EKNMTIAQHTV 267
+ G+D + L + LNT + + GG + ++
Sbjct: 1406 LYAGTGDNVLDGRDGNDTVSY-LFATAGVTVALNTSAVQTTGGSGLDTIKGTENLSGSQF 1464
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+S+ G+ +V+ G + N+ +G+DV G
Sbjct: 1465 ADSLTGNKNANVLNGGNGNDTLSGGAGDDVLIGG 1498
>gi|119510115|ref|ZP_01629254.1| putative calcium binding hemolysin protein [Nodularia spumigena
CCY9414]
gi|119465176|gb|EAW46074.1| putative calcium binding hemolysin protein [Nodularia spumigena
CCY9414]
Length = 1912
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 60/463 (12%), Positives = 119/463 (25%), Gaps = 54/463 (11%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T D+ G G I S I G + + + G
Sbjct: 646 NDTINGGGDNDYLDGGSGNDILNGGDGDDIISSDAGNDTINGGSGTDRYYAADYSDRLVG 705
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ Y++ + S++ +F DI+ G+P +
Sbjct: 706 LTMTYDSATGNGSIVVGTETDTFTSIENFDSFRGTNFDDIIV-----GSPTSDYYISGGA 760
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +Y G+D ++ N +I G + TI+
Sbjct: 761 GNDTISGNAGGDYLYGEDGNDTINGGGDDDYLDGASGNDTINGDAGNDTIYGGSGDDTIS 820
Query: 264 QHTVIESVVGSSGNDVVI------------------GNSANNVFFESSGNDVFDGSSGLD 305
H + ++G GND + G++ N+ GND+ +G G D
Sbjct: 821 GHAGNDYLIGQDGNDTINGGGDDDYLDGGSGNDILNGDAGNDSLSGGDGNDILNGGDGDD 880
Query: 306 TFFYYAPSY------------------LYKIYRFENAIIVYDANEHK--QDFLSDVERLR 345
T A + L + ++ V + D + +E
Sbjct: 881 TIISDAGNDTINGGSGTDRYAADYSDRLVGLTMTYDSATVNGSIVVGTETDTFTSIENFD 940
Query: 346 FADQC----IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ I + + A + + G D D
Sbjct: 941 YFRGTNFDDIIVGSPTSDYYISGGAGNDTISGNAGSDYLYGEDGNDTINGGGDDDYLIGG 1000
Query: 402 YLYLGSYDDLRN--VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
D N ++G D + + G++ + + D +
Sbjct: 1001 SGNDTINGDAGNDTIYGEDGDDTISGHAGNDYLIGQDGNDTINGGGDDDYLDGGSGNDIL 1060
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
G+ + + G RF+ D+ + +D
Sbjct: 1061 NGGGDSGEIDYISGGSGSDRFIIGDATWIGYDDGNAATNGNND 1103
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 62/458 (13%), Positives = 110/458 (24%), Gaps = 54/458 (11%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
T D+ G G TI S I G + +
Sbjct: 455 GQDGNDTINGGGDDDYLDGGSGNDILNGGDGNDTISSDAGNDTINGGSG-SDRYAADYSD 513
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ G+ Y++ + S++ +F Y DI+ G P
Sbjct: 514 RLVGLTMTYDSATGNGSIVVGTETDTFTSIENFDYFRGTNFDDIIV-----GTPTSDYYI 568
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK-----NYIDLNTESWSSIGGYEKN 259
+ + +Y G+D ++ N + G +
Sbjct: 569 SGGAGNDTISGNAGGDYLYGEDGNDTINGGGDDDYLDGGSGNDTINGDAGNDYLDGGSGD 628
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI+ H + ++G GND + G N+ SGND+ +G G D A +
Sbjct: 629 DTISGHAGNDYLIGEDGNDTINGGGDNDYLDGGSGNDILNGGDGDDIISSDAGNDTINGG 688
Query: 320 RFENAIIVYDANE---------------------HKQDFLSDVERLRFADQCIDS----- 353
+ D ++ + D + +E
Sbjct: 689 SGTDRYYAADYSDRLVGLTMTYDSATGNGSIVVGTETDTFTSIENFDSFRGTNFDDIIVG 748
Query: 354 --------VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DS 401
+ A + L G D + G D +
Sbjct: 749 SPTSDYYISGGAGNDTISGNAGGDYLYGEDGNDTINGGGDDDYLDGASGNDTINGDAGND 808
Query: 402 YLYLGSYDDLRNVFGSDRGA-----AARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
+Y GS DD + + L A ++ L
Sbjct: 809 TIYGGSGDDTISGHAGNDYLIGQDGNDTINGGGDDDYLDGGSGNDILNGDAGNDSLSGGD 868
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ G D + + + Y Y D
Sbjct: 869 GNDILNGGDGDDTIISDAGNDTINGGSGTDRYAADYSD 906
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/366 (13%), Positives = 87/366 (23%), Gaps = 30/366 (8%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
D + V D G ++ + +YG N +
Sbjct: 153 TLDGQMIEVEQQNFQGTQGNDYITGTDQDDLIEGLAGSDYLYGEDGNDTINGG-GDDDYL 211
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
TI G+D + G + + G + N TI + + G
Sbjct: 212 IGGSGNDTINGDAGNDTI----YGEDGDDTISGHAGNDYLIGQDGNDTINGGGDDDYLDG 267
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE- 332
SGND++ G++ N+ GND+ +G G DT A + + D ++
Sbjct: 268 GSGNDILNGDAGNDSLSGGDGNDILNGGDGDDTIISDAGNDTINGGSGTDRYYAADYSDR 327
Query: 333 --------------------HKQDFLSDVERLRFADQC----IDSVNVKQRSILEYTASY 368
+ D + +E I + A
Sbjct: 328 LVGLTMTYDSATGNGSIVVGTETDTFTSIENFDSFRGTNFDDIIVGTPTSDYYISGGAGN 387
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ + G D D + D N
Sbjct: 388 DTISGNAGGDYLYGEDGNDTINGGGDDDYLDGASGNDTINGDAGNDTIYGGSGDDTISGH 447
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G D + + L + G D S+ + S Y
Sbjct: 448 AGNDYLIGQDGNDTINGGGDDDYLDGGSGNDILNGGDGNDTISSDAGNDTINGGSGSDRY 507
Query: 489 LGSYDD 494
Y D
Sbjct: 508 AADYSD 513
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 63/560 (11%), Positives = 129/560 (23%), Gaps = 19/560 (3%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISS 84
+ F D + + D + G + D +
Sbjct: 360 DSFRGTNFDDIIVGTPTSDYYISGGAGNDTISGNAGG----------DYLYGEDGNDTIN 409
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
G S D G G TI H + G
Sbjct: 410 GGGDDDYLDGASGNDTINGDAGNDTIYGGSGDDTISGHAGNDYLIGQDGNDTINGGGDDD 469
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ G + + + + ++ G + + + GN
Sbjct: 470 YLDGGSGNDILNGGDGNDTISSDAGNDTINGGSGSDRYAADYSDR-LVGLTMTYDSATGN 528
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + I+ G + D+ + +Y +I G +
Sbjct: 529 GSIVVGTETDTFTSIENFDYFRGTNFDDIIVGTPTSDYYISGGAGNDTISGNAGGDYLYG 588
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G +D + G S N+ +GND DG SG DT + + +
Sbjct: 589 EDGNDTINGGGDDDYLDGGSGNDTINGDAGNDYLDGGSGDDTI--SGHAGNDYLIGEDGN 646
Query: 325 IIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ ++ D S + L D + + + + D +
Sbjct: 647 DTINGGGDNDYLDGGSGNDILNGGDGDDIISSDAGNDTINGGSGTDRYYAADYSDRLVGL 706
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG-----AAARHYITHGVKEGRNPD 438
Y+ G + S ++ + G++ + Y G
Sbjct: 707 TMTYDSATGNGSIVVGTETDTFTSIENFDSFRGTNFDDIIVGSPTSDYYISGGAGNDTIS 766
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+Y+ + D G + G + N
Sbjct: 767 GNAGGDYLYGEDGNDTINGGGDDDYLDGASGNDTINGDAGNDTIYGGSGDDTISGHAGND 826
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
+ + L A ++ L + G D +
Sbjct: 827 YLIGQDGNDTINGGGDDDYLDGGSGNDILNGDAGNDSLSGGDGNDILNGGDGDDTIISDA 886
Query: 559 YEEGRSITFNPDLYLTSYDD 578
+ + D Y Y D
Sbjct: 887 GNDTINGGSGTDRYAADYSD 906
>gi|47228071|emb|CAF97700.1| unnamed protein product [Tetraodon nigroviridis]
Length = 549
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/218 (14%), Positives = 51/218 (23%), Gaps = 41/218 (18%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE----- 72
++ W I + T ++ E R A W V L F E
Sbjct: 80 IQGLKWDKNEITFSIQNYTPKVGEYETYE-------AIRKAFKVWESVTPLRFREIPYSY 132
Query: 73 ----TSIHSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYG 113
+DI S + P + + +
Sbjct: 133 IRDKVEEFADIMIFFSEGFHGDSSPFDGEGGFLAHAYFPGNGIGGDTHFDAAEPWTVKNR 192
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
G + A+HE+GHALGL H ++ + + EN
Sbjct: 193 DLLGNDIFLVAVHELGHALGLEHSNDHSAIMAPFYQWMETENFELPDDDRRGIQQLYGYG 252
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
TP YG + +
Sbjct: 253 SGPQPPPVTP----------DYGLQPTHSPDKPHFGPS 280
>gi|254469875|ref|ZP_05083280.1| hemolysin-type calcium-binding protein [Pseudovibrio sp. JE062]
gi|211961710|gb|EEA96905.1| hemolysin-type calcium-binding protein [Pseudovibrio sp. JE062]
Length = 906
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/271 (12%), Positives = 74/271 (27%), Gaps = 13/271 (4%)
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV- 211
Y ++ ++ ++ ++ + + + ++V A + + Y +
Sbjct: 32 YSGNNIQSTELTVLDGDTVNVEGGYSKNDGHIRFNSLSVV----AHNVEIFDFTYNNDTA 87
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ T Y G+D L G + I G + I I+++
Sbjct: 88 DFYGLSYGVTAYMGDGND----DLNGTGHADTFYGQDGHDEIYGRGGDDHIDGGAGIDTI 143
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR--FENAIIVYD 329
G G D + G + + G D +G G D + + A
Sbjct: 144 WGGDGADQIDGGDDADTIYGGDGADRIEGGKGNDIIWGGSSGNTVASANEMHGGAGDDII 203
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+V+ D + + ++ + L G D
Sbjct: 204 HGATYVATTPNVDIAV--DHIDIAYGGEGDDVIYGYDGNDILDGGTGADTIYGGTGNDIL 261
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+D L+ G+ D+ +
Sbjct: 262 SSGSLKDQAVSDQLWGGAGADMFIIGDGSTD 292
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 42/237 (17%), Positives = 66/237 (27%), Gaps = 20/237 (8%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
F + N S D D T + EI G H
Sbjct: 78 FDFTYNNDTADFYGLSYGVTAYMGDGNDDLNGTGHADTFYGQDGHDEIYGRGGDDHIDGG 137
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G ++G D + D + Y ++ G I+G
Sbjct: 138 AGIDTIWGGDGADQIDGGDDADTIYGGDGADRIEGGKG------------NDIIWGG--- 182
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
S GN + I+ + I I E I GY+ N
Sbjct: 183 SSGNTVASANE-MHGGAGDDIIHGATYVATTPNVDIAVDHIDIAYGGEGDDVIYGYDGND 241
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ T +++ G +GND++ S + + +D G +G D F S Y
Sbjct: 242 ILDGGTGADTIYGGTGNDILSSGSLKDQ----AVSDQLWGGAGADMFIIGDGSTDYT 294
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 29/73 (39%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+V+GS G+D++ G+ N+ + GND G+ G DT + +
Sbjct: 627 IENVIGSHGHDIITGDDEGNILSGAGGNDRITGAGGNDTLVGGIGVDAFIFTADSGQDTI 686
Query: 328 YDANEHKQDFLSD 340
D +
Sbjct: 687 TDLGINDILVFKG 699
>gi|130487232|ref|NP_001076240.1| macrophage metalloelastase precursor [Oryctolagus cuniculus]
gi|3023531|sp|P79227|MMP12_RABIT RecName: Full=Macrophage metalloelastase; Short=MME; AltName:
Full=Matrix metalloproteinase-12; Short=MMP-12; Flags:
Precursor
gi|1839256|gb|AAB46993.1| macrophage metalloelastase MMP-12 precursor [Oryctolagus cuniculus]
Length = 464
Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 66/193 (34%), Gaps = 47/193 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W ++I Y+ T D+ + + A WS V L F + + +DI
Sbjct: 104 WRKHYITYRIKNYTPDMKREDV-------EYAIQKAFQVWSDVTPLKFRKITTGKADIMI 156
Query: 82 ISSNNGYVCTPRY-------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ ++ + + + +FD+ ++W KGT L A+HE+
Sbjct: 157 LFASGAHGDYGAFDGRGGVIAHAFGPGPGIGGDTHFDEDEIWSKSY-KGTNLFLVAVHEL 215
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H P + Y T +S DI
Sbjct: 216 GHALGLDHSND-----PKAIMFPTYGYIDLNTFHLS--------------------ADDI 250
Query: 189 VAVQKIYGAPKGS 201
+Q +YG P+
Sbjct: 251 RGIQSLYGGPEQH 263
>gi|31217385|gb|AAH52854.1| Matrix metallopeptidase 11 [Mus musculus]
Length = 492
Score = 72.1 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 62/195 (31%), Gaps = 52/195 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 104 LSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALQVWSEVTPLTFTEVHEGR 156
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G +GT L
Sbjct: 157 ADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGDNQGTDLL 214
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL + + ++MS +F Y
Sbjct: 215 QVAAHEFGHVLGL-------------------QRTTAAKALMS--------PFYTFRYPL 247
Query: 182 TPMVSDIVAVQKIYG 196
+ D +Q +YG
Sbjct: 248 SLSPDDRRGIQHLYG 262
>gi|326679760|ref|XP_002667151.2| PREDICTED: matrix metalloproteinase-16-like [Danio rerio]
Length = 387
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 53/205 (25%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y T + R A W V L FE
Sbjct: 54 LTGQKWLHRHITYSIKNFTPKVGA-------EETHNAIRRAFDVWQNVTPLRFEAVPYSE 106
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 107 LERSKKDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 166
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + Y+ + +
Sbjct: 167 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPF-----YQYMDTENFRLPHD-------- 213
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
D+ +QKIYG P
Sbjct: 214 ------------DLQGIQKIYGPPD 226
>gi|260220555|emb|CBA28210.1| hypothetical protein Csp_A06140 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 1771
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 7/178 (3%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ ++ + ++ + F + + +I V YGA G+
Sbjct: 1065 ADMDDQVTIKQWNNVKNRIETFGFADGLSLNMGNIDQVASGYGADDTLTGH---AGGDLL 1121
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ GG+D L GG N + + G + T+ ++ ++G
Sbjct: 1122 SGGAGNDALNGLGGNDYLI----GGAGNDQLNGGDGNDDLFGGAGDDTLEGGEGVDYLIG 1177
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
SG D + G + N+V +GND+ +G G D + + I +
Sbjct: 1178 GSGADTINGGNGNDVITGGAGNDILNGGRGNDVYHFNRGDGQDTINEAALGTETIQES 1235
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 47/367 (12%), Positives = 87/367 (23%), Gaps = 35/367 (9%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + GG+D L G I + S+ G +
Sbjct: 847 MGANDTLSGTAEGDFMSGGGGNDTL----SGAAGKDILVGGTGDDSLDGGADKDFLFAGA 902
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIY 319
++++G GND +I + ++V G+DV G G DT + +
Sbjct: 903 GNDTLIGGDGNDYLIAEAGDDVLEGGDGDDVLVGMDGNDTLRGGAGKDMLLGGVGVDILQ 962
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ +D + D + Q +
Sbjct: 963 GGGGDDTYFYFRGDGKDQIFDNLEHQETYQEQVYTGQVYEDYGKGGNWVNQYRTETRVRT 1022
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ +G I D + S DL + + + +
Sbjct: 1023 VQDDGGKDSLQFGQG--IVLDDLFFAMSGSDLVVGLREE---------ANTLLADMDDQV 1071
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
+ FAD N G + + + L + +
Sbjct: 1072 TIKQWNNVKNRIETFGFADGLS---------LNMGNIDQVASGYGADDTLTGHAGGDLLS 1122
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
G A + G L ++DL D G D+ G
Sbjct: 1123 GGAGNDALNGLGGNDYLIG--GAGNDQLNGGDGNDDLFGGAGDDTLEGGEGVDYLI--GG 1178
Query: 560 EEGRSIT 566
+I
Sbjct: 1179 SGADTIN 1185
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 64/515 (12%), Positives = 131/515 (25%), Gaps = 37/515 (7%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + + D D R G GK +L + I G
Sbjct: 909 GGDGNDYLIAEAGDDVLEGGDGDDVLVGMDGNDTLRGGAGKDMLLGGVGVD-ILQGGGGD 967
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
Y G + ++ E+ + + + + VQ
Sbjct: 968 DTYFYFRGDGKDQIFDNLEHQETYQEQVYTGQVYEDYGKGGNWVNQYRTETRVRTVQDDG 1027
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G I ++ S + + L + V N ++ G
Sbjct: 1028 GKDSLQFGQGIVLDDLFFAMSGSDLVVGLREEANTLLADMDDQVTIKQWNNVKNRIETFG 1087
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ +++ + + G +D + G++ ++ +GND +G G D + +
Sbjct: 1088 FADGLSLNMGNIDQVASGYGADDTLTGHAGGDLLSGGAGNDALNGLGGND--YLIGGAGN 1145
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
++ + ++ D L E + + + +
Sbjct: 1146 DQLNGGDGNDDLFGG--AGDDTLEGGE------GVDYLIGGSGADTINGGNGNDVITGGA 1197
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGS--------YDDLRNVFGSDRGAAARHYI 427
G D+ + + + G + LG+ Y + SD ++ + ++
Sbjct: 1198 GNDILNGGRGNDVYHFNRGDGQDTINEAALGTETIQESYTYTEQVLQTQSDGKSSYQVWV 1257
Query: 428 THGVKE------GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
I + D+V +
Sbjct: 1258 NETRTGYRSVLRAVEGGEDTLQFGRNIDISDIMLERNGSDMVISLLPLTGTEVTDSITIK 1317
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPD----------AFKALEYI 530
+D+ Y N F D G A T G L
Sbjct: 1318 GWDTPEYRIENLRFINDFAVDIGDIADARKGTTGNDVLTADTNVATWLGGGAGNDTLTGS 1377
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
++ + L A G D + FG +G+ I
Sbjct: 1378 SAADILHGAAGADTLNGGTGDDVYI-FGRGDGKDI 1411
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 4/130 (3%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + + + G+D + G + + ++ G N +
Sbjct: 1527 DGFAGNDTLRAGAGKDFVQGGSGNDTI----YGEADDDLLSGGLGNDTVYGGTGNDIVVG 1582
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+S+ G GNDV+ G +++ +G+D G +G DT+ Y+ +
Sbjct: 1583 DAGNDSLFGDEGNDVLAGGKGDDILNGGAGDDFIMGDAGNDTYQASTGFDTYRFGFGDGN 1642
Query: 325 IIVYDANEHK 334
+ +
Sbjct: 1643 DTYIGSEQAD 1652
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/470 (12%), Positives = 106/470 (22%), Gaps = 71/470 (15%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH---ALGLMHPGSYN 141
T + + D+ G G + + ALG
Sbjct: 1177 GGSGADTINGGNGNDVITGGAGNDILNGGRGNDVYHFNRGDGQDTINEAALGTETIQESY 1236
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS---DIVAVQKIYGAP 198
S+ V S++ A G T DI +
Sbjct: 1237 TYTEQVLQTQSDGKSSYQVWVNETRTGYRSVLRAVEGGEDTLQFGRNIDISDIM----LE 1292
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ I + + + TI + L +D+ + + G
Sbjct: 1293 RNGSDMVISLLPLTGTEVTDSITIKGWDTPEYRIENLRFINDFAVDIGDIADARKGTTGN 1352
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
++ A V + G +GND + G+SA ++ ++G D +G +G D + + +
Sbjct: 1353 DVLTADTNVATWLGGGAGNDTLTGSSAADILHGAAGADTLNGGTGDDVYIFGRGDGKDIL 1412
Query: 319 YRFENAIIVYDANEHKQDFL---------------------------------------- 338
+A + D + D L
Sbjct: 1413 NDSGSAGVGTDKSRPGGDKLLFGTNITMEDLVLQRFGEDMVVYLRDRNNPEGALSALTDS 1472
Query: 339 ----------SDVERLRFADQCIDS-----------VNVKQRSILEYTASYEDLIQVIGQ 377
+ VE +F D L +A + + G
Sbjct: 1473 VTITNWSNTNNRVEVFQFFDGKDFDVSGITNTYLGQGGADIADTLTGSAGADWMDGFAGN 1532
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D + G D + L N G
Sbjct: 1533 DTLRAGAGKDFVQGGSGNDTIYGEADDDLLSGGLGNDTVYGGTGNDIVVGDAGNDSLFGD 1592
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ L + L D + G D + + F
Sbjct: 1593 EGNDVLAGGKGDDILNGGAGDDFIMGDAGNDTYQASTGFDTYRFGFGDGN 1642
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 54/425 (12%), Positives = 110/425 (25%), Gaps = 36/425 (8%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+D+ A+ + G+ K + N + + + ++ + +
Sbjct: 569 ADLAALSALTGSAKATRINGGDGYDSLVVLDNSQLNLV-ADDINVESVLAGSANDSITGK 627
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N G N + + ++G +GND + + +V G D +G +G D
Sbjct: 628 NNAVNYVFDGGTGNDNLTTAGGEDVLLGGAGNDTLKSGAGADVLSGGEGTDRLEGGAGDD 687
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD----VERLRFADQCIDSV------N 355
+ +I + + +Q S+ E + D S
Sbjct: 688 VYVLNRGDGADRILDYAEDWYKQKYSYQEQVSYSEQYNYYESVYHTDGKSGSYVNELRSG 747
Query: 356 VKQRSILEYTASYEDLIQVI--GQDVFESMKHF---YEFGLSEGRDITFDSYLYLGSYDD 410
+ + +E Y D+ I G D + G D+
Sbjct: 748 YRAATRMEDRNGYRDVFGEIDGGIDTLQFGLGISVQDLVLSRVGEDMVVSLRASDNENAL 807
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAF-------------KALEYIASHEDLINAFA 457
+ + A ++ I + N F L A + +
Sbjct: 808 SADSVTVEGWADTKNRIENFAFTDGNLLDFSQIVNAQSGMGANDTLSGTAEGDFMSGGGG 867
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT----- 512
+ GKD ++ D + + G
Sbjct: 868 NDTLSGAAGKDILVGGTGDDSLDGGADKDFLFAGAGNDTLIGGDGNDYLIAEAGDDVLEG 927
Query: 513 -HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
G D L A + L+ G D + F +G+ F+
Sbjct: 928 GDGDDVLVGMDGNDTLRGGAGKDMLLGGVGVDILQGGGGDDTYFYF-RGDGKDQIFDNLE 986
Query: 572 YLTSY 576
+ +Y
Sbjct: 987 HQETY 991
>gi|260787547|ref|XP_002588814.1| hypothetical protein BRAFLDRAFT_89755 [Branchiostoma floridae]
gi|229273984|gb|EEN44825.1| hypothetical protein BRAFLDRAFT_89755 [Branchiostoma floridae]
Length = 2357
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 60/194 (30%), Gaps = 46/194 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF- 81
W + Y+ + + +AR A W+ V LTF DI
Sbjct: 118 WGRVDLTYRINSYPGENRLL----AGEVDETIAR-AFQVWADVTPLTFRPVPKKPDIDIE 172
Query: 82 ---------------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ + P +++FD A+ W +GT L A+H
Sbjct: 173 FARGKHGNCRLHFDGSGNTLAHAYFP--GEGLLGDVHFDAAERWTIQSPQGTNLFIVAVH 230
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H +VM + P + A
Sbjct: 231 ELGHSLGLDHA-------------------DHRDAVMFPWYPGYLGSSYLYQLPA----V 267
Query: 187 DIVAVQKIYGAPKG 200
D+ A+Q +YG
Sbjct: 268 DVTAIQALYGVTPS 281
>gi|4520361|dbj|BAA75922.1| matrix metalloproteinase-12 [Oryctolagus cuniculus]
Length = 464
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 66/193 (34%), Gaps = 47/193 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W ++I Y+ T D+ + + A WS V L F + + +DI
Sbjct: 104 WRKHYITYRIKNYTPDMKREDV-------EYAIQKAFQVWSDVTPLKFRKITTGEADIMI 156
Query: 82 ISSNNGYVCTPRY-------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ ++ + + + +FD+ ++W KGT L A+HE+
Sbjct: 157 LFASGAHGDYGAFDGRGGVIAHAFGPGPGIGGDTHFDEDEIWSKSY-KGTNLFLVAVHEL 215
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H P + Y T +S DI
Sbjct: 216 GHALGLDHSND-----PKAIMFPTYGYIDLNTFHLS--------------------ADDI 250
Query: 189 VAVQKIYGAPKGS 201
+Q +YG P+
Sbjct: 251 RGIQSLYGGPEQH 263
>gi|254476658|ref|ZP_05090044.1| hypothetical protein RR11_2496 [Ruegeria sp. R11]
gi|214030901|gb|EEB71736.1| hypothetical protein RR11_2496 [Ruegeria sp. R11]
Length = 636
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 60/196 (30%), Gaps = 6/196 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
++ + + I+ D+ + L+ G I + E+ G E TI
Sbjct: 373 LDAENETVHGIKFYDDTMEIAEIPLSFYGAN---ISVRNEAGIVRVGSEAGDTINGGAAR 429
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G GND V G + N+ G D G + DT K++ ++
Sbjct: 430 DNLNGGLGNDRVAGYTGNDALRGGRGLDTLVGGAQNDTL--DGGIGHDKLFGNHGLDVLR 487
Query: 329 DANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + ++L L+ ++ L G DV
Sbjct: 488 GGSGNDTLNAGIGRDKLFGNHGRDILRAGSGNDTLDGGVGHDKLFGERGMDVLRGGSGND 547
Query: 388 EFGLSEGRDITFDSYL 403
GRD F
Sbjct: 548 TLNGGGGRDRLFGGAG 563
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 43/133 (32%), Gaps = 6/133 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA +L I + + + + G+D L+ + +
Sbjct: 462 GAQNDTLDGGI--GHDKLFGNHGLDVLRGGSGNDTLNAGIGRDKL----FGNHGRDILRA 515
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N T+ + + G G DV+ G S N+ G D G +G DTF + A S
Sbjct: 516 GSGNDTLDGGVGHDKLFGERGMDVLRGGSGNDTLNGGGGRDRLFGGAGSDTFVFGANSGN 575
Query: 316 YKIYRFENAIIVY 328
+ F
Sbjct: 576 DVVRDFVAGEDSV 588
>gi|115345688|ref|YP_771869.1| rhizobiocin [Roseobacter denitrificans OCh 114]
gi|115293009|gb|ABI93461.1| rhizobiocin [Roseobacter denitrificans OCh 114]
Length = 434
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 65/246 (26%), Gaps = 8/246 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID-----LNTESWSSIGGYEKNMTIA 263
+ + +I G+D ++ V + D + G N I+
Sbjct: 181 GDDRLIGQDGDDSIEGGDGNDRINGGGGEDVVDGGDGDDQIFAGTDDDVVKGANGNDWIS 240
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++ G G+D + GN N+ GND G G D + I
Sbjct: 241 GGDGDDNLFGDQGDDTINGNFGNDYIVGGIGNDSLYGDEGDDRLI--GNAGNDTIDGGAG 298
Query: 324 AIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + + +++ + + L G D
Sbjct: 299 KDHMSGGHGDDIISGGAGDDKIYANQGGDTIYGGDGNDYMSAGEGNDILYGGRGDDTLAG 358
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+F G + DL +D+ + +G N D
Sbjct: 359 GAGKDQFVFDIGDGDDQINDFAFEDNLDLTGFLLADQTLEDAASMENGNLVLSNGDDRIT 418
Query: 443 LEYIAS 448
L + +
Sbjct: 419 LLGLET 424
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/233 (15%), Positives = 69/233 (29%), Gaps = 14/233 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ +Y + GDD L D ++ GG N + G + + I
Sbjct: 162 GGDDYMIGGAGNDILYGNAGDDRLIGQDGDDSIEGGDGNDRINGGGGEDVVDGGDGDDQI 221
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
T + V G++GND + G ++ F G+D +G+ G D + +Y E
Sbjct: 222 FAGTDDDVVKGANGNDWISGGDGDDNLFGDQGDDTINGNFGND--YIVGGIGNDSLYGDE 279
Query: 323 NAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + D + + + + + + G D
Sbjct: 280 GDDRLIGNAGNDTIDGGAGKDHMSGGHGDDIISGGAGDDKIYANQGGDTIYGGDGNDYMS 339
Query: 382 SMKHFYEFGLSEGRDITFDSY------LYLGSYDDLRNVFGSDRGAAARHYIT 428
+ + G D +G DD N F + ++
Sbjct: 340 AGEGNDILYGGRGDDTLAGGAGKDQFVFDIGDGDDQINDFAFEDNLDLTGFLL 392
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 69/287 (24%), Gaps = 20/287 (6%)
Query: 83 SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
I D+ G ++ + I G G
Sbjct: 149 FYGGLADDVASGAGGDDYMIGGAGNDILYGNAGDDRLIGQDGDDSIEGGDGNDRINGGGG 208
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
V G D D + + + + + G + +G
Sbjct: 209 EDVVDGGDGDDQIFAGTDDDVVKGANGNDWISGGDGDDNLFGDQGDDTINGNFGNDYIVG 268
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G + + G+D +D + G + I
Sbjct: 269 G----IGNDSLYGDEGDDRLIGNAGNDTID-------------GGAGKDHMSGGHGDDII 311
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + + + G D + G N+ GND+ G G DT A + +
Sbjct: 312 SGGAGDDKIYANQGGDTIYGGDGNDYMSAGEGNDILYGGRGDDTLAGGAGKDQFVFDIGD 371
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ D L+ ADQ ++ + L + +
Sbjct: 372 GDDQINDFAFEDNLDLTG---FLLADQTLEDAASMENGNLVLSNGDD 415
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/236 (11%), Positives = 53/236 (22%), Gaps = 3/236 (1%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ I + G +DV G ++ +GND+ G++G D I
Sbjct: 138 VKIVATNGDDYFYGGLADDVASGAGGDDYMIGGAGNDILYGNAGDDRLI--GQDGDDSIE 195
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQD 378
+ + D + FA D V + ++L G D
Sbjct: 196 GGDGNDRINGGGGEDVVDGGDGDDQIFAGTDDDVVKGANGNDWISGGDGDDNLFGDQGDD 255
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
G D + + N HG
Sbjct: 256 TINGNFGNDYIVGGIGNDSLYGDEGDDRLIGNAGNDTIDGGAGKDHMSGGHGDDIISGGA 315
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ + + + G D ++ ++ D
Sbjct: 316 GDDKIYANQGGDTIYGGDGNDYMSAGEGNDILYGGRGDDTLAGGAGKDQFVFDIGD 371
>gi|149201943|ref|ZP_01878917.1| hypothetical protein RTM1035_05365 [Roseovarius sp. TM1035]
gi|149144991|gb|EDM33020.1| hypothetical protein RTM1035_05365 [Roseovarius sp. TM1035]
Length = 598
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/303 (16%), Positives = 79/303 (26%), Gaps = 12/303 (3%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L LT +G + N L + G + +A ++++G GND + G + F
Sbjct: 231 LPLTEVGTLGNDTLLGNRDDDFLNGLAGDDRLAGDEGNDTLLGGDGNDRLFGQEGGDEIF 290
Query: 291 ESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
SG+D +GS G DT A + + + D +
Sbjct: 291 GESGDDRLNGSLGHDTLNGGEGHDSLSAGLGDDSLTGDAGNDNIGGGLGNDTIDAGDGDD 350
Query: 344 LRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
D + L + L G D G DI +
Sbjct: 351 TVGGGSGNDLITGGLGDDFLSGGWDRDTLDGGDGHDTLTGASGADYLSGGAGDDIVAGAS 410
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
D N S R G + + A + + D
Sbjct: 411 GNDRITGDAGNDRLSGSAGDDRIDGGDGADQIGGGTGRDTIIGGAGDDQVGGGKGDDSIQ 470
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
G D S + + G+ D G+ A H+ KEG
Sbjct: 471 GGSGNDDLSGGSGADTIEGGDGNDTVNGARGDDVLSGGAG----ADHFEFTVAKEGETDS 526
Query: 523 AFK 525
Sbjct: 527 VLD 529
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 76/306 (24%), Gaps = 34/306 (11%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
VG+ GND ++GN ++ +G+D G G DT +++ E ++ +
Sbjct: 236 VGTLGNDTLLGNRDDDFLNGLAGDDRLAGDEGNDTLL--GGDGNDRLFGQEGGDEIFGES 293
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
L ++ L +G D G
Sbjct: 294 -----------------GDDRLNGSLGHDTLNGGEGHDSLSAGLGDDSLTGDAGNDNIGG 336
Query: 392 SEGRDITFDSYLYLGS-----YDDLRNVFGSDRGAA----ARHYITHGVKEGRNPDAFKA 442
G D D + G D + G
Sbjct: 337 GLGNDTIDAGDGDDTVGGGSGNDLITGGLGDDFLSGGWDRDTLDGGDGHDTLTGASGADY 396
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
L A + + A + G D S ++ + G + G+
Sbjct: 397 LSGGAGDDIVAGASGNDRITGDAGNDRLSGSAGDDRIDGGDGADQIGGGTGRDTIIGGAG 456
Query: 503 RGAAARHYIT------HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
G + +E ++ + A D AG DHF
Sbjct: 457 DDQVGGGKGDDSIQGGSGNDDLSGGSGADTIEGGDGNDTVNGARGDDVLSGGAGADHFEF 516
Query: 557 FGYEEG 562
+EG
Sbjct: 517 TVAKEG 522
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 62/219 (28%), Gaps = 13/219 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK-----NYIDLNTESWSSIGGYEKNMTIA 263
+ I G+D +D N + + G T+
Sbjct: 321 GDDSLTGDAGNDNIGGGLGNDTIDAGDGDDTVGGGSGNDLITGGLGDDFLSGGWDRDTLD 380
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLY 316
+++ G+SG D + G + +++ +SGND G +G D
Sbjct: 381 GGDGHDTLTGASGADYLSGGAGDDIVAGASGNDRITGDAGNDRLSGSAGDDRIDGGDGAD 440
Query: 317 KIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+I + + + + ++ D +E + +
Sbjct: 441 QIGGGTGRDTIIGGAGDDQVGGGKGDDSIQGGSGNDDLSGGSGADTIEGGDGNDTVNGAR 500
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
G DV F + ++ DS L DL +
Sbjct: 501 GDDVLSGGAGADHFEFTVAKEGETDSVLDFEDGVDLIVI 539
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/253 (16%), Positives = 68/253 (26%), Gaps = 21/253 (8%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + D G+G ++ IG LG + D D
Sbjct: 299 NGSLGHDTLNGGEGHDSLSAGLGDDSLTGDAGNDNIGGGLG---------NDTIDAGDGD 349
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ + D + + + GA S G +
Sbjct: 350 DTVGGGSGNDLITGGLGDDFLSGGWDRDTLDGGDGHDTLTGASGADYLSGG----AGDDI 405
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ I G+D L + + + IGG TI + V
Sbjct: 406 VAGASGNDRITGDAGNDRLSGSAGDDRIDG----GDGADQIGGGTGRDTIIGGAGDDQVG 461
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII--VYDA 330
G G+D + G S N+ SG D +G G DT + A A
Sbjct: 462 GGKGDDSIQGGSGNDDLSGGSGADTIEGGDGNDTV--NGARGDDVLSGGAGADHFEFTVA 519
Query: 331 NEHKQDFLSDVER 343
E + D + D E
Sbjct: 520 KEGETDSVLDFED 532
>gi|254563888|ref|YP_003070983.1| hypothetical protein METDI5572 [Methylobacterium extorquens DM4]
gi|254271166|emb|CAX27177.1| hypothetical protein METDI5572 [Methylobacterium extorquens DM4]
Length = 140
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 13/85 (15%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F + Y+ + D+ AF P + H+ ++G+ EGR + F+ + YL + D+
Sbjct: 35 GFDPIYYLYWYPDVR-AFPQGPLV------HYIHYGWREGRDPSAGFSGEGYLKANPDVR 87
Query: 581 NVFGSDRSAAAQHYITHGMKEGRAL 605
H++ G+ EGR
Sbjct: 88 ----ESGCNPLVHFVECGLAEGRKG 108
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHED 535
FD YL Y D+R HYI +G +EGR+P F Y+ ++ D
Sbjct: 30 RTPLPGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKANPD 85
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ + P + HF G EGR
Sbjct: 86 VRES-GCNPLV------HFVECGLAEGR 106
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 455
FD YL Y D+R HYI +G +EGR+P F Y+ ++ D+ +
Sbjct: 34 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKANPDVRES 89
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
+ HF G EGR
Sbjct: 90 GCNP-------LVHFVECGLAEGR 106
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 10/82 (12%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
+ Y Y D+ + H+ +G EGRD + F YL + D+R
Sbjct: 35 GFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKANPDVR--- 87
Query: 416 GSDRGAAARHYITHGVKEGRNP 437
H++ G+ EGR
Sbjct: 88 -ESGCNPLVHFVECGLAEGRKG 108
Score = 45.2 bits (105), Expect = 0.032, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
F+P YL Y D+ HYI +G +EGR
Sbjct: 34 PGFDPIYYLYWYPDVRAFPQG----PLVHYIHYGWREGR 68
>gi|240141372|ref|YP_002965852.1| hypothetical protein MexAM1_META1p4971 [Methylobacterium extorquens
AM1]
gi|240011349|gb|ACS42575.1| hypothetical protein MexAM1_META1p4971 [Methylobacterium extorquens
AM1]
Length = 137
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 13/85 (15%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F + Y+ + D+ AF P + H+ ++G+ EGR + F+ + YL + D+
Sbjct: 32 GFDPIYYLYWYPDVR-AFPQGPLV------HYIHYGWREGRDPSAGFSGEGYLKANPDVR 84
Query: 581 NVFGSDRSAAAQHYITHGMKEGRAL 605
H++ G+ EGR
Sbjct: 85 ----ESGCNPLVHFVECGLAEGRKG 105
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHED 535
FD YL Y D+R HYI +G +EGR+P F Y+ ++ D
Sbjct: 27 RTPLPGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKANPD 82
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ + P + HF G EGR
Sbjct: 83 VRES-GCNPLV------HFVECGLAEGR 103
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 455
FD YL Y D+R HYI +G +EGR+P F Y+ ++ D+ +
Sbjct: 31 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKANPDVRES 86
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
+ HF G EGR
Sbjct: 87 GCNP-------LVHFVECGLAEGR 103
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 10/82 (12%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
+ Y Y D+ + H+ +G EGRD + F YL + D+R
Sbjct: 32 GFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKANPDVR--- 84
Query: 416 GSDRGAAARHYITHGVKEGRNP 437
H++ G+ EGR
Sbjct: 85 -ESGCNPLVHFVECGLAEGRKG 105
Score = 45.2 bits (105), Expect = 0.032, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
F+P YL Y D+ HYI +G +EGR
Sbjct: 31 PGFDPIYYLYWYPDVRAFPQG----PLVHYIHYGWREGR 65
>gi|163853918|ref|YP_001641961.1| hypothetical protein Mext_4522 [Methylobacterium extorquens PA1]
gi|163665523|gb|ABY32890.1| hypothetical protein Mext_4522 [Methylobacterium extorquens PA1]
Length = 137
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 13/85 (15%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F + Y+ + D+ AF P + H+ ++G+ EGR + F+ + YL + D+
Sbjct: 32 GFDPIYYLYWYPDVR-AFPQGPLV------HYIHYGWREGRDPSAGFSGEGYLKANPDVR 84
Query: 581 NVFGSDRSAAAQHYITHGMKEGRAL 605
H++ G+ EGR
Sbjct: 85 ----ESGCNPLVHFVECGLAEGRKG 105
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHED 535
FD YL Y D+R HYI +G +EGR+P F Y+ ++ D
Sbjct: 27 RTPLPGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKANPD 82
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ + P + HF G EGR
Sbjct: 83 VRES-GCNPLV------HFVECGLAEGR 103
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 455
FD YL Y D+R HYI +G +EGR+P F Y+ ++ D+ +
Sbjct: 31 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKANPDVRES 86
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
+ HF G EGR
Sbjct: 87 GCNP-------LVHFVECGLAEGR 103
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 10/82 (12%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
+ Y Y D+ + H+ +G EGRD + F YL + D+R
Sbjct: 32 GFDPIYYLYWYPDVRAF----PQGPLVHYIHYGWREGRDPSAGFSGEGYLKANPDVR--- 84
Query: 416 GSDRGAAARHYITHGVKEGRNP 437
H++ G+ EGR
Sbjct: 85 -ESGCNPLVHFVECGLAEGRKG 105
Score = 45.2 bits (105), Expect = 0.032, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
F+P YL Y D+ HYI +G +EGR
Sbjct: 31 PGFDPIYYLYWYPDVRAFPQG----PLVHYIHYGWREGR 65
>gi|261364734|ref|ZP_05977617.1| hemolysin-type calcium binding protein [Neisseria mucosa ATCC
25996]
gi|288567033|gb|EFC88593.1| hemolysin-type calcium binding protein [Neisseria mucosa ATCC
25996]
Length = 282
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 51/184 (27%), Gaps = 10/184 (5%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
T+ G + + I G + N T+ +S+ G G D + G N+ +
Sbjct: 8 TIYGTSGEDVIYGGDGADVIYGGDGNDTLQGGNNGDSLYGQGGKDYLQGGDGNDYLNGGA 67
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ---- 349
D+ G G D +F Y N I + +VE L
Sbjct: 68 DADIMRGGDGNDVYFVDHKGDEVIEYGNLNGGIDTVRSVIDYTLTDNVEHLFLQGSGNLN 127
Query: 350 ------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
D + L A + L+ G D + G D F
Sbjct: 128 GTGNALNNDINGNSGDNHLYGLAGDDCLVGKDGNDYLDGGIGNDVLIGGTGNDTYFFDKG 187
Query: 404 YLGS 407
Y
Sbjct: 188 YGRD 191
Score = 37.8 bits (86), Expect = 6.5, Method: Composition-based stats.
Identities = 40/255 (15%), Positives = 73/255 (28%), Gaps = 23/255 (9%)
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
I G +G +YG D + Y + G +D
Sbjct: 9 IYGTSGEDVIYGGDGADVIYGGDGNDTLQGGNNGDSLYGQGGKDYLQGGDGNDYLNGGAD 68
Query: 188 IVAVQKIYGAPKG---SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
++ G G+ + + ++++ D D ++ + G N
Sbjct: 69 ADIMRGGDGNDVYFVDHKGDEVIEYGNLNGGIDTVRSVIDYTLTDNVEHLFLQGSGNLNG 128
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD----- 299
+ I G + + + +VG GND + G N+V +GND +
Sbjct: 129 TGNALNNDINGNSGDNHLYGLAGDDCLVGKDGNDYLDGGIGNDVLIGGTGNDTYFFDKGY 188
Query: 300 ------GSSGLDTFFYYA--PSYLYKIYRFENAIIVYDANEHKQDFLSD-------VERL 344
SG DT + + + + N + V N +E
Sbjct: 189 GRDTIQDESGNDTLQFGKGISASDVLLSKSGNNLTVSVGNSDSVTIDDWFSGNNHKIENF 248
Query: 345 RFADQCIDSVNVKQR 359
+FAD V
Sbjct: 249 KFADGSTYEVTGHGD 263
>gi|261363852|ref|ZP_05976735.1| putative type I secretion target GGXGXDXXX repeat-containing domain
protein [Neisseria mucosa ATCC 25996]
gi|288568446|gb|EFC90006.1| putative type I secretion target GGXGXDXXX repeat-containing domain
protein [Neisseria mucosa ATCC 25996]
Length = 885
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 51/376 (13%), Positives = 102/376 (27%), Gaps = 85/376 (22%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
++ G + I + + + N T+ +++ G G D++ G ++
Sbjct: 52 NIFGAGNNGDNILIGNSGRNRLNSGRGNDTVYGGGGDDTINGGEGFDLLFGEDGDDTLNG 111
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA---------------IIVYDANEHKQD 336
+G+D+ +G +G DT+ + A I E I N+ QD
Sbjct: 112 EAGDDILNGGAGNDTYIFSAAGGRDTIIDTEGNNRIRFTGGLRAEDLTITAVANNDGGQD 171
Query: 337 ----------------------FLSDVERLRFADQCIDSVNVK------------QRSIL 362
+ + + F + ++ Q +
Sbjct: 172 WKISIKNTDSVLTISNQYTAGSSVPSIHQFVFDNGVLNVAEFIRATKANIETAKPQNLAI 231
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR---NVFGSDR 419
T S + L G D + G D Y+ + D+ G+D
Sbjct: 232 NGTDSDDVLNGSDGNDTIDGKAGADTMSGGWG-----DDTYYVDNVKDVIIEGKGAGTDT 286
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
++ Y E + ++ D I + + G+
Sbjct: 287 VISSVSYTAATNVENVTLTGNANIFGAGNNSDNILTGNAGHNRLNSGR------------ 334
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
D+ +G D+L G D + + A ++ LI
Sbjct: 335 --GNDTVYGMGGNDNLNGGDGDDYLD--------------GGEGNDNINGDAGNDTLIGG 378
Query: 540 FADAPDLVQAGKDHFS 555
AG D +
Sbjct: 379 KGKDTLKGGAGNDTYI 394
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 54/352 (15%), Positives = 97/352 (27%), Gaps = 20/352 (5%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
D + N +S + D G G TI + G
Sbjct: 49 GDANIFGAGNNGDNILIGNSGRNRLNSGRGNDTVYGGGGDDTINGGEGFDLLFGEDG--- 105
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+ G D T + S +D+++D + A
Sbjct: 106 ---DDTLNGEAGDDILNGGAGNDTYIFSAAGGRDTIIDTEGNNRIRF-TGGLRAEDLTIT 161
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A + G +KI ++ DS + + G + + +++ I
Sbjct: 162 AVANNDGGQDWKISIKNTDSVLTISNQYTAGSSVPSIHQFVFDNGVLNVAE----FIRAT 217
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N+ A+ ++ G+ +DV+ G+ N+ +G D G G DT++
Sbjct: 218 KANIETAKP-QNLAINGTDSDDVLNGSDGNDTIDGKAGADTMSGGWGDDTYYVDNVK--D 274
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVI 375
I + A + ++VE + I +IL A + L
Sbjct: 275 VIIEGKGAGTDTVISSVSYTAATNVENVTLTGNANIFGAGNNSDNILTGNAGHNRLNSGR 334
Query: 376 GQDVFESMKHFYEFG-----LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
G D M D+ D L G D
Sbjct: 335 GNDTVYGMGGNDNLNGGDGDDYLDGGEGNDNINGDAGNDTLIGGKGKDTLKG 386
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 64/242 (26%), Gaps = 21/242 (8%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
D+ I D + G G T + G N G
Sbjct: 363 NDNINGDAGNDTLIGGKGKDTLKGGAGNDTYIF-----------GDDDTIIDNQGNNSLR 411
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+D SV + S + ++ D + + L Y
Sbjct: 412 FSDDLRIKDLKISVNDNAQGGKDWLITST--NGSALIRDQIGADGKVSVGRFELLGETYT 469
Query: 209 IEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI----- 262
E K + G D+ + ID + + G + +
Sbjct: 470 HESLLKAVANSNKQDSTITGTARDDILTGTEQNDTIDSGIDGRDRLYGLGGDDILRDSGT 529
Query: 263 --AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + + G GND + + ++ +G+D +G DT+ + I+
Sbjct: 530 SYFGNERDDELYGGDGNDKLYADVGDDYLDGGAGDDHLEGGQHRDTYVFGKGYGHDTIFD 589
Query: 321 FE 322
+
Sbjct: 590 YN 591
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 11/117 (9%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
++ G + I + + N T+ +++ G G+D + G N+
Sbjct: 309 NIFGAGNNSDNILTGNAGHNRLNSGRGNDTVYGMGGNDNLNGGDGDDYLDGGEGNDNING 368
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+GND G G DT + ++ LRF+D
Sbjct: 369 DAGNDTLIGGKGKDT-----------LKGGAGNDTYIFGDDDTIIDNQGNNSLRFSD 414
>gi|94480751|emb|CAK02715.1| HlyA protein [Escherichia coli]
Length = 1024
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 44/151 (29%), Gaps = 25/151 (16%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + N + +++ G +G+D + G N+ +GN
Sbjct: 732 FGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGN 791
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D S +V L
Sbjct: 792 NYLNGGDGDDELQVQGNS-----------------------LAKNV--LSGGKGNDKLYG 826
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ +L+ + L G D++ + +
Sbjct: 827 SEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 38.2 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 79/287 (27%), Gaps = 24/287 (8%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------APSYLYKIYRFENAIIV 327
G+D V ++ + + G+DV DT + + Y + R +
Sbjct: 617 GDGDDKVFLSAGSANIYAGKGHDVVYY-DKTDTGYLTIDGTKATEAGNYTVTRVLGGDVK 675
Query: 328 YDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E + E+ ++ +N K + + S E+LI D F K
Sbjct: 676 VLQEVVKEQEVSVGKRTEKTQYRSYEFTHINGKNLTETDNLYSVEELIGTTRADKFFGSK 735
Query: 385 HFYEFGLSEGRD----ITFDSYLYLGSYDDLRNV-------FGSDRGAAARHYITHGVKE 433
F ++G D + LY +D + +G D +
Sbjct: 736 FTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGNNYLN 795
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV---TFDSYLYLG 490
G + D ++ + +++++ L + G D Y YL
Sbjct: 796 GGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLS 855
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
Y + + + Y A L
Sbjct: 856 GYGHHIIDDDGGKDDKLSLADIDFRDVAFRREGNDLIMYKAEGNVLS 902
>gi|307155175|ref|YP_003890559.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
gi|306985403|gb|ADN17284.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
Length = 469
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/249 (16%), Positives = 75/249 (30%), Gaps = 15/249 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-----YIDLNTESWSSIGGYEKNMTIA 263
+ T+ G+DLL + L + S+ G +N +++
Sbjct: 141 GNDTLTGANAADTLIGGLGNDLLTGLGGNDNLSGDAGIDTLLGGDGNDSLNGGTENDSLS 200
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
I++++G GND + G + N+ +GND +G +G DT +
Sbjct: 201 GDAGIDTLLGGDGNDNLSGGTENDSLSGDAGNDTLNGGAGNDTL----NGGTENDSLSGD 256
Query: 324 AIIVYDANEHKQDFLSD---VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
A I D L+ ++L L A + L G+D
Sbjct: 257 AGIDTLNGGDGNDTLNGDTENDKLNGEAGNDTLNGGAGDDYLNGGAGTDTLYGGAGKDNL 316
Query: 381 ESMKHFYEFGLSEGRDITFDSYLY---LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
E D G R VF + + + G +
Sbjct: 317 NGDLQNDRLYGDEDNDTLIGGSGDDTLTGGTQTDRFVFANQGIDTITDFSVNDTVNGVDV 376
Query: 438 DAFKALEYI 446
A ++ +Y
Sbjct: 377 LAIQSNKYS 385
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 72/278 (25%), Gaps = 20/278 (7%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-IGGYEKNMTIAQHTVIESVVGS 274
+PF++T+ + G+ + + + + + I G N T+ ++++G
Sbjct: 98 TPFVKTLILTSGNTTYTKAPTTQLFSAQNTFSTTEQYKIMGTNGNDTLTGANAADTLIGG 157
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
GND++ G N+ +G D G G D+ + +
Sbjct: 158 LGNDLLTGLGGNDNLSGDAGIDTLLGGDGNDSL-------------NGGTENDSLSGDAG 204
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D L D + + L A + L G D G
Sbjct: 205 IDTLLG------GDGNDNLSGGTENDSLSGDAGNDTLNGGAGNDTLNGGTENDSLSGDAG 258
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
D D N + G L A ++L
Sbjct: 259 IDTLNGGDGNDTLNGDTENDKLNGEAGNDTLNGGAGDDYLNGGAGTDTLYGGAGKDNLNG 318
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ D ++ + ++ +
Sbjct: 319 DLQNDRLYGDEDNDTLIGGSGDDTLTGGTQTDRFVFAN 356
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 35/280 (12%), Positives = 70/280 (25%), Gaps = 23/280 (8%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI----ESVVGSSGNDVVI 281
G + D ++ + L + + + + AQ+T ++G++GND +
Sbjct: 87 GLPNGTDTFVLTPFVKTLILTSGNTTYTKAPTTQLFSAQNTFSTTEQYKIMGTNGNDTLT 146
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G +A + GND+ G G D + + + + + E+
Sbjct: 147 GANAADTLIGGLGNDLLTGLGGNDNL--SGDAGIDTLLGGDGNDSLNGGTEN-------- 196
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
L ++L D G D
Sbjct: 197 ---------DSLSGDAGIDTLLGGDGNDNLSGGTENDSLSGDAGNDTLNGGAGNDTLNGG 247
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
D + + L A + L
Sbjct: 248 TENDSLSGDAGIDTLNGGDGNDTLNGDTENDKLNGEAGNDTLNGGAGDDYLNGGAGTDTL 307
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
GKD+ + + + D+ +G D G+
Sbjct: 308 YGGAGKDNLNGDLQNDRLYGDEDNDTLIGGSGDDTLTGGT 347
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 39/330 (11%), Positives = 69/330 (20%), Gaps = 3/330 (0%)
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
F ++K + + L A+ + +L ++L G
Sbjct: 118 TTQLFSAQNTFSTTEQYKIMGTNGNDTLTGANAADTLIGGLGNDLLTGLGGNDNLSGDAG 177
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D D N S G
Sbjct: 178 IDTLLGGDGNDSLNGGTENDSLSGDAGIDTLLGGDGNDNLSGGTENDSLSGDAGNDTLNG 237
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
L ++ L G D + + + G D
Sbjct: 238 GAGNDTLNGGTENDSLSGDAGIDTLNGGDGNDTLNGDTENDKLNGEAGNDTLNGGAGDDY 297
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
G+ Y G L ++ LI D D F
Sbjct: 298 LNGGAGTDTL---YGGAGKDNLNGDLQNDRLYGDEDNDTLIGGSGDDTLTGGTQTDRFVF 354
Query: 557 FGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVM 616
F+ + + D L +A A +LG + + +
Sbjct: 355 ANQGIDTITDFSVNDTVNGVDVLAIQSNKYSNAPAAGTTPLLNLANISLGTTNIIVDTKT 414
Query: 617 NLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
N+S + ++ L D G+
Sbjct: 415 NISLLGSTVTNARFAYTTDTNQLLYDADGN 444
>gi|170742130|ref|YP_001770785.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
gi|168196404|gb|ACA18351.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
Length = 535
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 18/118 (15%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD Y +Y D+ RHY+ HG +EGR P+ F+ Y+ S+ + A
Sbjct: 2 FDVDWYRRTYPDVSASG----ADPIRHYVDHGSREGRMPNPLFRPHWYLDSYPHVRTAD- 56
Query: 542 DAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
P + H+ G E G F+ Y SY D H++T
Sbjct: 57 VNPLV------HYIRHGVEHGLKPHPLFDTAWYDASYPDAAAA----GLHPLAHFLTR 104
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 47/184 (25%), Positives = 63/184 (34%), Gaps = 28/184 (15%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRN 497
F Y ++ D+ + AD H+ + G EGR F + YL SY +R
Sbjct: 2 FDVDWYRRTYPDVSASGADP-------IRHYVDHGSREGRMPNPLFRPHWYLDSYPHVRT 54
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
HYI HGV+ G P F Y AS+ D A HF
Sbjct: 55 A----DVNPLVHYIRHGVEHGLKPHPLFDTAWYDASYPDAAAA-------GLHPLAHFLT 103
Query: 557 FGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE---GRALGISGMQFK 613
E NP L SY D ++ AA +HY+ G E GR +
Sbjct: 104 --RNEDSRYNPNPLFDLASYIDSHSLPLDSNIAALEHYM--GTDENLSGRTARPGPASTR 159
Query: 614 SVMN 617
+
Sbjct: 160 AGNG 163
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 57/161 (35%), Gaps = 26/161 (16%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD Y +Y D+ RHY+ HG +EGR P+ F+ Y+ S+ + A
Sbjct: 2 FDVDWYRRTYPDVSAS----GADPIRHYVDHGSREGRMPNPLFRPHWYLDSYPHVRTADV 57
Query: 458 DAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ H+ G E G FD+ Y SY D H++T
Sbjct: 58 NP-------LVHYIRHGVEHGLKPHPLFDTAWYDASYPDAAAAG----LHPLAHFLTRNE 106
Query: 516 KEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
NP+ F YI SH D A +H+
Sbjct: 107 DSRYNPNPLFDLASYIDSHS-------LPLDSNIAALEHYM 140
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 58/166 (34%), Gaps = 22/166 (13%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFG 416
+ Y +Y D + G D +H+ + G EGR + F + YL SY +R
Sbjct: 2 FDVDWYRRTYPD-VSASGADPI---RHYVDHGSREGRMPNPLFRPHWYLDSYPHVRTA-- 55
Query: 417 SDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
HYI HGV+ G P F Y AS+ D A +
Sbjct: 56 --DVNPLVHYIRHGVEHGLKPHPLFDTAWYDASYPDAAAAGLHPLAHFLTRNED-----S 108
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
FD L SY D ++ AA HY+ G E +
Sbjct: 109 RYNPNPLFD----LASYIDSHSLPLDSNIAALEHYM--GTDENLSG 148
Score = 39.0 bits (89), Expect = 2.8, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 36/134 (26%), Gaps = 15/134 (11%)
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
Y SY + + ++H E GL FD+ Y SY D
Sbjct: 43 HWYLDSYPHVRTADVNPLVHYIRHGVEHGLK--PHPLFDTAWYDASYPDAAAA----GLH 96
Query: 422 AARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQVGKDHFSNF-GCEEGR 479
H++T NP+ F YI SH D +H+ GR
Sbjct: 97 PLAHFLTRNEDSRYNPNPLFDLASYIDSHS-------LPLDSNIAALEHYMGTDENLSGR 149
Query: 480 FVTFDSYLYLGSYD 493
Sbjct: 150 TARPGPASTRAGNG 163
>gi|75832168|ref|NP_001028820.1| matrix metalloproteinase 16 [Strongylocentrotus purpuratus]
gi|62005762|gb|AAX59991.1| matrix metalloproteinase 16 [Strongylocentrotus purpuratus]
Length = 562
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 59/215 (27%), Gaps = 53/215 (24%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQ-------EVARWALGEWSKVVDLTF 70
R+ S LN + + R A W +V L F
Sbjct: 112 TAGHALGGRMRRFAHTGGKWETHSLTFRILNSANRLRGSESDDAIRRAFKVWEEVTPLKF 171
Query: 71 EETSIHS--DIKFISSNN---------------GYVCTPRYD-SRYFMEINFDKADVWRY 112
E + DI + + P+ +++FD A+ +
Sbjct: 172 TEVQGNGRADIYLTFGSGDHGDQFPFDGPGFTLAHAFPPQSGWGEMDGDVHFDDAETYTV 231
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
GT L A HEIGH+LGL H +
Sbjct: 232 SSYDGTNLFQVAAHEIGHSLGLGHSTDSRALMAPF------------------------- 266
Query: 173 MDASFGYCATPMVSDI-VAVQKIYGAPKGSLGNNI 206
+ + D +Q++YG+ + S+G
Sbjct: 267 --YAGYIPDFQLPYDDQQGIQRLYGSKRPSVGTTT 299
>gi|260222767|emb|CBA32654.1| hypothetical protein Csp_D33230 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 1493
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/343 (14%), Positives = 85/343 (24%), Gaps = 41/343 (11%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
T S + AD G G + + +
Sbjct: 1088 GGGAGNDTLTGSSAADILHGGAGADTLTGGTGDDVYIFGRGDGKDILNDSGSAGVGTDKS 1147
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
P N + V+ F + + + +V + +
Sbjct: 1148 RPGGDKLLFGTNITMEDLVLQRFGEDMVVYLRDRNNPEGALSALTDSVTMKNWSNTANRV 1207
Query: 204 NNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + D I T G D D + G+ N T+
Sbjct: 1208 EVFQFFDGKDFDVSGITNTYLGQAGADTADTLTGSA----------GADWMDGFAGNDTL 1257
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ V G SGND + G + +++ GND G +G D
Sbjct: 1258 RAGAGKDFVQGGSGNDTIYGEADDDLLSGGLGNDTVYGGTGNDIVV-------------- 1303
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ D L E K IL A + ++ G D +++
Sbjct: 1304 --------GDAGNDSLFGDE------GNDVLAGGKGDDILNGGARDDFIMGDAGNDTYQA 1349
Query: 383 MKHFYE--FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
F FG +G D S + D+ + +
Sbjct: 1350 STGFDTYRFGFGDGNDTYIGSEQADINGTDVIQLESGVTKESL 1392
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 7/178 (3%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ ++ + ++ + F + + +I V YGA G+
Sbjct: 787 ADMDDQVTIKDWSNAKNRIETFGFADGLSLNMGNIDQVASGYGADDTLTGH---AGGDLL 843
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
T+ GG+D L GG N + + G + T+ ++ ++G
Sbjct: 844 SGGAGNDTLNGLGGNDYLI----GGAGNDQLNGGDGNDDLFGGTGDDTLEGGEGVDYLIG 899
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
SG D + G + N+V +GND+ +G G D + + I +
Sbjct: 900 GSGADTINGGNGNDVITGGAGNDILNGGRGNDVYHFNRGDGQDTINEAALGTETIQQS 957
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/378 (13%), Positives = 105/378 (27%), Gaps = 39/378 (10%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + GDD LD GG ++ G + N + T
Sbjct: 588 GGNDTLSGAAGKDILVGGTGDDRLD----GGADKDFLFAGAGNDTLIGGDGNDYLIAETG 643
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G G+DV++G N+ +G D+ G +G+D Y +R + +
Sbjct: 644 DDVLEGGDGDDVLVGMDGNDTLRGGAGKDMLLGGAGVDFLQGGGGDDTYFYFRGDGKDQI 703
Query: 328 YDANEHKQDF----------------LSDVERLRFADQCIDSVNVKQRSILEYTAS---Y 368
YD +H++ + + V + R + + + L++
Sbjct: 704 YDNLDHQETYQEQVYTGQVYEDYGKGGNWVNQYRTETRVRTVQDDGGKDSLQFGQGIVLD 763
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ + G D+ ++ L++ D F +
Sbjct: 764 DLFFAMSGADLVVGLREEANTLLADMDDQVTIKDWSNAKNRIETFGFADGLSLNMGNIDQ 823
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G + + DL++ A L +G + + G D
Sbjct: 824 VASGYGADDTLTGH-----AGGDLLSGGAGNDTLNGLGGNDYLIGG------AGNDQLNG 872
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
DDL G D GV + ++ + +
Sbjct: 873 GDGNDDLFGGTGDDTLEGGE-----GVDYLIGGSGADTINGGNGNDVITGGAGNDILNGG 927
Query: 549 AGKDHFSNFGYEEGRSIT 566
G D + + +I
Sbjct: 928 RGNDVYHFNRGDGQDTIN 945
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 59/519 (11%), Positives = 132/519 (25%), Gaps = 55/519 (10%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ D + T R + M + D + G G T +
Sbjct: 645 DVLEGGDGDDVLVGMDGNDTLRGGAGKDMLLGGAGVDFLQGGGGDDTYFYFRGDGKDQIY 704
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
L H +Y V DY V Y G + + +
Sbjct: 705 DNLDHQETYQEQVYTGQVYEDYGKGGNW--VNQYRTETRVRTVQDDGGKDSLQFGQGIVL 762
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
++ A G ++ ++ ++ DD + + KN I+
Sbjct: 763 DDLFFA---MSGADLVVGLREEANTLLADM------DDQVTIKDWSNAKNRIE------- 806
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G+ +++ + + G +D + G++ ++ +GND +G G D +
Sbjct: 807 -TFGFADGLSLNMGNIDQVASGYGADDTLTGHAGGDLLSGGAGNDTLNGLGGND--YLIG 863
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ + ++ D L E + + + +
Sbjct: 864 GAGNDQLNGGDGNDDLFGG--TGDDTLEGGE------GVDYLIGGSGADTINGGNGNDVI 915
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS--------YDDLRNVFGSDRGAAA 423
G D+ + + + G + LG+ Y + SD ++
Sbjct: 916 TGGAGNDILNGGRGNDVYHFNRGDGQDTINEAALGTETIQQSYTYTEQVLQTQSDGKSSY 975
Query: 424 RHYITHGVKE------GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ ++ I + D+V +
Sbjct: 976 QVWVNETRTGYRSVLRAVEGGEDTLQFGRNIDISDIMLSRNGSDMVISLLPLTGTEVTDS 1035
Query: 478 GRFVTFDSYLYLGSY-----------DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
+++ Y D+ + G +
Sbjct: 1036 ITIKGWNTPEYRIENLRFINDFAVDIGDIADARKGTTGNDVLTADANVASWLGGGAGNDT 1095
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
L ++ + L G D + FG +G+ I
Sbjct: 1096 LTGSSAADILHGGAGADTLTGGTGDDVYI-FGRGDGKDI 1133
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 59/494 (11%), Positives = 119/494 (24%), Gaps = 52/494 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D T I AD G G I + G
Sbjct: 872 GGDGNDDLFGGTGDDTLEGGEGVDYLIGGSGADTINGGNGNDVITGGAGNDILNGGRGND 931
Query: 136 HPGSYNGGYPVYGVDNDYENDSFL---TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G + ++ T Q + + ++
Sbjct: 932 VYHFNRGDGQDTINEAALGTETIQQSYTYTEQVLQTQSDGKSSYQVWVNETRTGYRSVLR 991
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIY------DSGGDDLLDLTLIGGVKNYI--- 243
+ G I + + D + + + I
Sbjct: 992 AVEGGEDTLQFGRNIDISDIMLSRNGSDMVISLLPLTGTEVTDSITIKGWNTPEYRIENL 1051
Query: 244 --------DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
D+ + + G ++ A V + G +GND + G+SA ++ +G
Sbjct: 1052 RFINDFAVDIGDIADARKGTTGNDVLTADANVASWLGGGAGNDTLTGSSAADILHGGAGA 1111
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G +G D + + + +A + D + D L + D +
Sbjct: 1112 DTLTGGTGDDVYIFGRGDGKDILNDSGSAGVGTDKSRPGGDKLLFGTNITMEDLVLQRFG 1171
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
++ Y + + + +T ++ + ++ F
Sbjct: 1172 ---EDMVVYLRDRNNPEGAL---------------SALTDSVTMKNWSNTANRVEVFQFF 1213
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ T+ + G + A D ++ FA L F G
Sbjct: 1214 DGKDFDVSGITNTYLGQAGADTADTLTGSAGA---DWMDGFAGNDTLRAGAGKDFVQGGS 1270
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
+ +Y + DDL + + Y G +L ++
Sbjct: 1271 G-------NDTIYGEADDDLLSGGLGNDT----VYGGTGNDIVVGDAGNDSLFGDEGNDV 1319
Query: 536 LINAFADAPDLVQA 549
L D A
Sbjct: 1320 LAGGKGDDILNGGA 1333
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 52/411 (12%), Positives = 112/411 (27%), Gaps = 35/411 (8%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+D+ A+ + G+ K + N + + + ++ + +
Sbjct: 291 ADLAALSALTGSAKATRINGGDGYDSLVVLDNSQLNLI-ADDINVESVLAGSANDSISGK 349
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N G N T+ + ++G +GND + + +V +G D +G +G D
Sbjct: 350 NNTINYVFDGGAGNDTLTTAGGEDVLLGGAGNDTLRSGAGADVLSGGAGTDRLEGGAGDD 409
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ +I + + +Q +S E+ + + + + E
Sbjct: 410 VYVLNRGDGADRILDYAEDWYKQKYSYQEQ--VSYSEQYNYYESVYHTDGKSGSYVNELR 467
Query: 366 ASY-----------------------EDLIQVIGQDVFE------SMKHFYEFGLSEGRD 396
+ Y + L +G V + S+ +
Sbjct: 468 SGYRAATRMENRNGYRDVFGEVDGGIDTLQFGLGISVQDLVLSRVGEDMVVSLRSSDDEN 527
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
+ + + D RN + + ++ + D ++
Sbjct: 528 TLSADSVTIEGWADTRNRIENFAFTDGNLLDFSQIVNAQSGMGANDTLSGTAEGDFMSGG 587
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
L G + R +L + + G D V
Sbjct: 588 GGNDTLSGAAGKDILVGGTGDDRLDGGADKDFLFAGAGNDTLIGGDGNDYLIAETGDDVL 647
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
EG + D L + ++ L L AG D F G + F
Sbjct: 648 EGGDGD--DVLVGMDGNDTLRGGAGKDMLLGGAGVD-FLQGGGGDDTYFYF 695
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 59/484 (12%), Positives = 111/484 (22%), Gaps = 73/484 (15%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH---ALGLMHPGSYN 141
T + + D+ G G + + ALG
Sbjct: 899 GGSGADTINGGNGNDVITGGAGNDILNGGRGNDVYHFNRGDGQDTINEAALGTETIQQSY 958
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS---DIVAVQKIYGAP 198
S+ V S++ A G T DI +
Sbjct: 959 TYTEQVLQTQSDGKSSYQVWVNETRTGYRSVLRAVEGGEDTLQFGRNIDISDIMLSRNGS 1018
Query: 199 K------------GSLGNNIYKIEVQQKDSPFIQTIYDSGGD--DLLDLTLIGGVKNYID 244
+ I + ++ I D D D+ D + +
Sbjct: 1019 DMVISLLPLTGTEVTDSITIKGWNTPEYRIENLRFINDFAVDIGDIADARKGTTGNDVLT 1078
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV-FFE-SSGNDVFD--- 299
+ S +GG N T+ + + + G +G D + G + ++V F G D+ +
Sbjct: 1079 ADANVASWLGGGAGNDTLTGSSAADILHGGAGADTLTGGTGDDVYIFGRGDGKDILNDSG 1138
Query: 300 -GSSGLDTFFYYAPSYLYKI--------------------------YRFENAIIVYDANE 332
G D L+ +A+ +
Sbjct: 1139 SAGVGTDKSRPGGDKLLFGTNITMEDLVLQRFGEDMVVYLRDRNNPEGALSALTDSVTMK 1198
Query: 333 HKQDFLSDVERLRFADQ--------------------CIDSVNVKQRSILEYTASYEDLI 372
+ + + VE +F D ++ A + L
Sbjct: 1199 NWSNTANRVEVFQFFDGKDFDVSGITNTYLGQAGADTADTLTGSAGADWMDGFAGNDTLR 1258
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G+D + D+ Y N + G
Sbjct: 1259 AGAGKDFVQGGSGNDTIYGEADDDLLSGGLGNDTVYGGTGNDIVVGDAGNDSLFGDEGND 1318
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
L A + ++ + G D + FG +G S +
Sbjct: 1319 VLAGGKGDDILNGGARDDFIMGDAGNDTYQASTGFDTY-RFGFGDGNDTYIGSEQADING 1377
Query: 493 DDLR 496
D+
Sbjct: 1378 TDVI 1381
>gi|123187|sp|P09983|HLYAC_ECOLX RecName: Full=Hemolysin, chromosomal
gi|146379|gb|AAA23975.1| chromosomal hemolysin A (hlyA) [Escherichia coli]
Length = 1023
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 44/151 (29%), Gaps = 25/151 (16%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + N + +++ G +G+D + G N+ +GN
Sbjct: 731 FGSKFADIFHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGN 790
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D S +V L
Sbjct: 791 NYLNGGDGDDELQVQGNS-----------------------LAKNV--LSGGKGNDKLYG 825
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ +L+ + L G D++ + +
Sbjct: 826 SEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 856
Score = 37.8 bits (86), Expect = 5.7, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 79/287 (27%), Gaps = 24/287 (8%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------APSYLYKIYRFENAIIV 327
G+D V ++ + + G+DV DT + + Y + R +
Sbjct: 616 GDGDDKVFLSAGSANIYAGKGHDVVYY-DKTDTGYLTIDGTKATEAGNYTVTRVLGGDVK 674
Query: 328 YDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E + E+ ++ +N K + + S E+LI D F K
Sbjct: 675 VLQEVVKEQEVSVGKRTEKTQYRSYEFTHINGKNLTETDNLYSVEELIGTTRADKFFGSK 734
Query: 385 HFYEFGLSEGRD----ITFDSYLYLGSYDDLRNV-------FGSDRGAAARHYITHGVKE 433
F ++G D + LY +D + +G D +
Sbjct: 735 FADIFHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGNNYLN 794
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV---TFDSYLYLG 490
G + D ++ + +++++ L + G D Y YL
Sbjct: 795 GGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLS 854
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
Y + + + Y A L
Sbjct: 855 GYGHHIIDDDGGKDDKLSLADIDFRDVAFRREGNDLIMYKAEGNVLS 901
>gi|166367965|ref|YP_001660238.1| hypothetical protein MAE_52240 [Microcystis aeruginosa NIES-843]
gi|166090338|dbj|BAG05046.1| probable Chi protein [Microcystis aeruginosa NIES-843]
Length = 910
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/269 (13%), Positives = 76/269 (28%), Gaps = 9/269 (3%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + + + + + + V G ++
Sbjct: 538 TDGNEAGSVSSVFTLTRTGDLSSALTVNYTLGGTATPGVDYTGTTPSSVTFAALSPTATI 597
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L + G + + + D+ +A+ +D +A
Sbjct: 598 TLPTKDDLLSDPGETITTTITAPVGYTISGPDNATATILDNDGNAANDNLVGTGFADALA 657
Query: 191 -------VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+ + G G + + D+ G D L+ +
Sbjct: 658 GVGGNDTLSGLGGNDTLDGGADNDTYLFNTDLVLGSDLLIDALGTDTLNFAATTTKTINL 717
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+L + + ++ +T+A+ T E+V+G S ND ++GNS N +GND G G
Sbjct: 718 NLGSTAAQTVTAGNLTLTLARATAFENVIGGSLNDTILGNSLVNSLTGGAGNDSLTGGLG 777
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANE 332
D L + + +
Sbjct: 778 KDIL--TGSDGLDTLNYNSLGESLLTGFD 804
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/365 (11%), Positives = 85/365 (23%), Gaps = 35/365 (9%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNG-----YVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
+ V +F + + SN G N G
Sbjct: 432 TDVDFFSFTTAAGPISLTVTPSNRGPNLDILAELYNASGVLVASSNPADFLAASISANVG 491
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA-- 175
+ + +G L + G Y + + + + S+
Sbjct: 492 AGTYYLKVDGVGKGDPLGTGYTDYGSLGQYAITGSIIRGTISIAKTTDGNEAGSVSSVFT 551
Query: 176 ---SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD--- 229
+ + V+ + G + + D D
Sbjct: 552 LTRTGDLSSALTVNYTLGGTATPGVDYTGTTPSSVTFAALSPTATITLPTKDDLLSDPGE 611
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ T+ V I + ++I + N +++VG+ D + G N+
Sbjct: 612 TITTTITAPVGYTISGPDNATATILDNDGN------AANDNLVGTGFADALAGVGGNDTL 665
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
GND DG + DT+ + L + ++ A Q
Sbjct: 666 SGLGGNDTLDGGADNDTYLFNTDLVLGSDLLIDALGTDTLNFAATTTKTINLNLGSTAAQ 725
Query: 350 CI----------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ + + + + L G D S+
Sbjct: 726 TVTAGNLTLTLARATAFENVIGGSLNDTILGNSLVNSLTGGAGNDSLTGGLGKDILTGSD 785
Query: 394 GRDIT 398
G D
Sbjct: 786 GLDTL 790
Score = 41.3 bits (95), Expect = 0.52, Method: Composition-based stats.
Identities = 60/534 (11%), Positives = 124/534 (23%), Gaps = 43/534 (8%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKAD----VWRYGIGKGTILSHNALH 126
+T+ + S+ + Y N++ + + H
Sbjct: 269 TDTAWGVRVAIGGSSYDWFGAGAGGVAYVGSFNWNSDTPTFVFSTQTLSDEKYTAEAISH 328
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH LGL H G Y ++ +M Q+ + Y A
Sbjct: 329 EVGHTLGLKHDGRTTPSEAYYLGHG--AGETGWAPIMGAGYYQNLTQWSKGQYLAANNTE 386
Query: 187 DIVAV---QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
D +A+ Q +G GN + + + + +D I
Sbjct: 387 DDLAIITTQNGFGYRVDDKGNTLATASTLTVFGTAVSSSGIIERNTDVDFFSFTTAAGPI 446
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGS 301
L + S+ G + + V S+ D + + + NV +G DG
Sbjct: 447 SLTV-TPSNRGPNLDILAELYNASGVLVASSNPADFLAASISANV---GAGTYYLKVDGV 502
Query: 302 SGLDT----FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
D + Y Y I + A + V + + D +
Sbjct: 503 GKGDPLGTGYTDYGSLGQYAITGSIIRGTISIAKTTDGNEAGSVSSVFTLTRTGDLSSAL 562
Query: 358 QRSILEYTA---SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD-----SYLYLGSYD 409
+ + F ++ L D+ D +
Sbjct: 563 TVNYTLGGTATPGVDYTGTTPSSVTFAALSPTATITLPTKDDLLSDPGETITTTITAPVG 622
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ + + AL + ++ L + D
Sbjct: 623 YTISGPDNATATILDNDGNAANDNLVGTGFADALAGVGGNDTLSGLGGNDTLDGGADNDT 682
Query: 470 FS--------------NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ G + F + + +
Sbjct: 683 YLFNTDLVLGSDLLIDALGTDTLNFAATTTKTINLNLGSTAAQTVTAGNLTLTLARATAF 742
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
+ + + L + GKD G + ++ +N
Sbjct: 743 ENVIGGSLNDTILGNSLVNSLTGGAGNDSLTGGLGKD--ILTGSDGLDTLNYNS 794
>gi|284051143|ref|ZP_06381353.1| hypothetical protein AplaP_06687 [Arthrospira platensis str.
Paraca]
Length = 889
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N + L + + G N TIA + + G SGND++ GN N++ SG++
Sbjct: 30 GTEANNVILLGGGFDVVYGIAGNNTIAGGLDDDILYGGSGNDIIAGNDGNDILDGGSGSN 89
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA---NEHKQDFL 338
+ G G D + S + + + D L
Sbjct: 90 ILAGGRGNDIYRVSLGSNTGGTIINDGGTHLSPLEWISGSGTDTL 134
Score = 57.1 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 45/151 (29%), Gaps = 21/151 (13%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
++L G +L + G E N I + V G +GN+ + G +++
Sbjct: 5 TINLADRDGDDFTQNLLQNWNYEVIGTEANNVILLGGGFDVVYGIAGNNTIAGGLDDDIL 64
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+ SGND+ G+ G D S + I +
Sbjct: 65 YGGSGNDIIAGNDGNDIL--DGGSGSNILAGGRGNDIYRVSLGSNT------------GG 110
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
I + S LE I G D
Sbjct: 111 TIINDGGTHLSPLE-------WISGSGTDTL 134
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 10/84 (11%), Positives = 21/84 (25%), Gaps = 8/84 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y++ E ++ D + + IL + + +
Sbjct: 25 NYEVIGTEANNVILLGG--GFDVVYGI------AGNNTIAGGLDDDILYGGSGNDIIAGN 76
Query: 375 IGQDVFESMKHFYEFGLSEGRDIT 398
G D+ + G DI
Sbjct: 77 DGNDILDGGSGSNILAGGRGNDIY 100
>gi|119488759|ref|ZP_01621768.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
gi|119455182|gb|EAW36323.1| Hemolysin-type calcium-binding region protein [Lyngbya sp. PCC
8106]
Length = 1131
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/141 (13%), Positives = 40/141 (28%), Gaps = 5/141 (3%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ I ++++G+ DV+ + +++ G D G G DT ++
Sbjct: 2 IEINGTPGNDNLLGTGEADVIFALTGDDIISGLGGGDSLFGFRGNDTI--NGNEGNDTLF 59
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV--NVKQRSILEYTASYEDLIQVIGQ 377
+N ++ + E D + +L A +
Sbjct: 60 GNQNLDLLIGDSGDDW-LFGGKEADIIEDGEGEDQLFGNLGDDLLRGGAGNDQRYGGKAN 118
Query: 378 DVFESMKHFYEFGLSEGRDIT 398
D + G DI
Sbjct: 119 DTVIGGTGNDQVFGDRGNDIL 139
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 55/176 (31%), Gaps = 14/176 (7%)
Query: 202 LGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G++I TI + G+D L G + + + G ++
Sbjct: 26 TGDDIISGLGGGDSLFGFRGNDTINGNEGNDTL----FGNQNLDLLIGDSGDDWLFGGKE 81
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
I + + G+ G+D++ G + N+ + ND G +G D F +
Sbjct: 82 ADIIEDGEGEDQLFGNLGDDLLRGGAGNDQRYGGKANDTVIGGTGNDQVF--GDRGNDIL 139
Query: 319 YRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + + + D L+ + DQ + + L
Sbjct: 140 WGID--VDAINPGIDEIDTLTGGSEPDIFVLGDQSRLYYIGSGNNDFALITDFNVL 193
>gi|85704230|ref|ZP_01035333.1| VCBS [Roseovarius sp. 217]
gi|85671550|gb|EAQ26408.1| VCBS [Roseovarius sp. 217]
Length = 4874
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 74/267 (27%), Gaps = 9/267 (3%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + + N P I D D+ G +I +
Sbjct: 4552 VNPDATASLSIAVNDVEEGPVATGENDTLIGNDGDDLIGGLDGNDSISGGLGSDSLFGEA 4611
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G V G D D + + +D G ++
Sbjct: 4612 GADTLSGGEGNDTVAGGDGDDLVSGDAGNDSLGGGFGNDTLDGGDGDDTMGGGVGDDSLS 4671
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
GA + G +I S G+DL++ G + +
Sbjct: 4672 GGNGADVVAGG----AGNDTLDGGDGNDSISGSFGNDLIN----AGAGDDQIGGGTGRDT 4723
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G N I + + G SGND + G N+V +GND +G +G D A
Sbjct: 4724 LDGGAGNDRIGGGEGDDDISGGSGNDFLAGGGRNDVIDGGTGNDTINGGTGNDIMTGGAD 4783
Query: 313 SYLYKIYRF-ENAIIVYDANEHKQDFL 338
S + F + V D
Sbjct: 4784 SDQFVFSSFVDGEFDVITDFTDGTDSF 4810
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 68/239 (28%), Gaps = 14/239 (5%)
Query: 200 GSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESW 250
G+ G+++ +++ G D L D G + + + +
Sbjct: 4582 GNDGDDLIGGLDGNDSISGGLGSDSLFGEAGADTLSGGEGNDTVAGGDGDDLVSGDAGND 4641
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S GG N T+ +++ G G+D + G + +V +GND DG G D+
Sbjct: 4642 SL-GGGFGNDTLDGGDGDDTMGGGVGDDSLSGGNGADVVAGGAGNDTLDGGDGNDSI--S 4698
Query: 311 APSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + D + +R+ + D L +
Sbjct: 4699 GSFGNDLINAGAGDDQIGGGTGRDTLDGGAGNDRIGGGEGDDDISGGSGNDFLAGGGRND 4758
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ G D D F ++ D+ F + +
Sbjct: 4759 VIDGGTGNDTINGGTGNDIMTGGADSD-QFVFSSFVDGEFDVITDFTDGTDSFLIRIVN 4816
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 25/247 (10%), Positives = 50/247 (20%), Gaps = 20/247 (8%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
L D + + + L G D + +G D+
Sbjct: 4580 LIGNDGDDLIGGLDGNDSISGGLGSDSLFGEAGADTLSGGEGNDTVAGGDGDDLVSGDAG 4639
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
N G + + A ++ L +
Sbjct: 4640 NDSLGGGFGNDTLDGGDGDDTMGGGVGDDSLSGGNGADVVAGGAGNDTLDGGDGNDSISG 4699
Query: 464 QVGKDHFSNFGCEE--GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
G D + ++ G D+ D + G D +
Sbjct: 4700 SFGNDLINAGAGDDQIGGGTGRDTLDGGAGNDRIGGGEGDDDIS--------------GG 4745
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWN 581
L ++ + + G D G + F ++ D+
Sbjct: 4746 SGNDFLAGGGRNDVIDGGTGNDTINGGTGND--IMTGGADSDQFVF--SSFVDGEFDVIT 4801
Query: 582 VFGSDRS 588
F
Sbjct: 4802 DFTDGTD 4808
Score = 40.9 bits (94), Expect = 0.75, Method: Composition-based stats.
Identities = 23/206 (11%), Positives = 41/206 (19%), Gaps = 30/206 (14%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ + ++ + + +G D EG D
Sbjct: 4574 TGENDTLIGNDGDDLIGGLDGNDSISGGLGSDSLFGEAGADTLSGGEGNDTVAGGDGDDL 4633
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
D N G +L + + + G
Sbjct: 4634 VSGDAGNDSLGGGFGNDTLDGGDGDDTMGGGVGDDSLSGGNGADVVAGGAGNDTLDGGDG 4693
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
D + FG+D A G GR
Sbjct: 4694 -------------------------NDSISGSFGNDLINAGAGDDQIGGGTGR-----DT 4723
Query: 527 LEYIASHEDLINAFADAPDLVQAGKD 552
L+ A ++ + D +G D
Sbjct: 4724 LDGGAGNDRIGGGEGDDDISGGSGND 4749
>gi|189347357|ref|YP_001943886.1| Hemolysin-type calcium-binding region [Chlorobium limicola DSM 245]
gi|189341504|gb|ACD90907.1| Hemolysin-type calcium-binding region [Chlorobium limicola DSM 245]
Length = 1855
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 66/541 (12%), Positives = 133/541 (24%), Gaps = 23/541 (4%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWS---KVVDLTFEETSIHSDIKFISSN---N 86
D+ L + E + +L ++ V +L + + H + ++ N
Sbjct: 244 DIYYVDSLGDGVLEGLDEGTDRVYSSLAAYTLSDNVENLNLQGAAFHGTGNDLDNSIVGN 303
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY-NGGYP 145
+ D G G G + G + Y + G
Sbjct: 304 NSSNSLDGGEGNDSLSGSAGDDTLIGGPGLGNDTLNGGSGSDSMVGGSGNDTYYIDSGTD 363
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK--------IYGA 197
D D +S++SY M + A +++ +YG
Sbjct: 364 EIVESLDGGTDRVYSSLISYDMEANVENLILQDGDALFGYGNLLDNSITGNDSDNVLYGG 423
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
N ++ G+DLLD ++ GY
Sbjct: 424 DGNDSLNGGDG-NDSLNGGNHNDSLNGGNGNDLLDGGEGNDTLIGGTGTGSGDDTLYGYA 482
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N ++ + +S+ G ND + G + N++ G D G +G DT++ +
Sbjct: 483 GNDSLTGYDGDDSLFGGEENDTLSGGNGNDMLDGGMGIDSMVGGAGNDTYYVDHANDRVN 542
Query: 318 IYRFENAIIVYDANE-HKQDFLSDVERLRF--ADQCIDSVNVKQRSILEYTASYEDLIQV 374
N + + ++VE L I+ +++ + L
Sbjct: 543 ETLVVNGTADHVYSSLSAYTLGNNVENLTLIEGAGDINGTGNTLDNVITGNSGNNTLSGG 602
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG---- 430
G D G D + + + A+ + +T
Sbjct: 603 AGNDTLNGGAGIDSMAGGTGNDTYYVNDPGDVVTETSGGGTADHVYASFSYTLTDNSYIE 662
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+ AS L + + +G D +
Sbjct: 663 NLTLQEGAGDIVGIGNASDNVLTGSNGNNTLDGALGNDTLDGGAGSDYLDGGAGDDWLSD 722
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+ +G + L + L + G
Sbjct: 723 EDAGGGSNTLDGGDGNDTVDAGYGTQSVTGGAGDDILSVYEATGVLDGGDGADVLDGEYG 782
Query: 551 K 551
Sbjct: 783 T 783
Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 63/478 (13%), Positives = 119/478 (24%), Gaps = 17/478 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D+ + G G + + +A + G
Sbjct: 1095 TGDGGNDTLEGQNSTAVLSGDAGDDLVDARHGTYTLTGGEGDDEVSADDATGVLEGGSGN 1154
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G Y + G + E + S D +M +G + +S +
Sbjct: 1155 DVVDGEYGTYTMTGGTGNDEMYGYYFSGNMSGNEDDDLMYLGYGEGTSVTMSGDSGNDTL 1214
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G G+ + T+ G D LD + D +++
Sbjct: 1215 IGDLAGTYQMAGDAGNDELYGDTGNDTLDGGAGSDYLDGGAGDDWLSDED-AEGGSNTLD 1273
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N T+ +SV G +G+D++ A V G DV DG G T+ S
Sbjct: 1274 GGDGNDTVDAGYGTQSVTGGAGDDILSVYEATGVLDGGDGADVLDGEYG--TYTMTGGSG 1331
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+Y + + + ++ + + LE S L
Sbjct: 1332 NDDLYGYYFGGTMSGGADDDNMYVG------YGSGTVTMTGDGGNDTLEGQNSTAVLSGD 1385
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
+G DV ++ Y EG D N G E
Sbjct: 1386 LGNDVVDARHGTYTLTGGEGDDEVSADDATGVLEGGSGNDVVDGEYGTYTMTGGTGNDEM 1445
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
++ ++++ F + + G + + +
Sbjct: 1446 YGYYFSGSMSGNEDNDNMYVGFGEGASVTMSG------GSGNDTMLGDLGGTYLMAGDEG 1499
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
++G G L + + F +G D
Sbjct: 1500 NDELYGYTGNDTLD--GGAGNDLVAGASGNDLLYGNEGDDSVYGGFGINTLYGGSGND 1555
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 52/415 (12%), Positives = 106/415 (25%), Gaps = 9/415 (2%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
T+ T + G + D G T+ N+ +
Sbjct: 1323 TYTMTGGSGNDDLYGYYFGGTMSGGADDDNMYVGYGSGTVTMTGDGGNDTLEGQNSTAVL 1382
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
LG + +G Y + G + D E + + + + ++D +G
Sbjct: 1383 SGDLGNDVVDARHGTYTLTGGEGDDEVSADDATGVLEGGSGNDVVDGEYGTYTM-TGGTG 1441
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
Y GN T+ G+D + L Y+ E
Sbjct: 1442 NDEMYGYYFSGSMSGNEDNDNMYVGFGEGASVTMSGGSGNDTM---LGDLGGTYLMAGDE 1498
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ GY N T+ + V G+SGND++ GN ++ + G + G SG D+
Sbjct: 1499 GNDELYGYTGNDTLDGGAGNDLVAGASGNDLLYGNEGDDSVYGGFGINTLYGGSGNDSV- 1557
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + + L + + + A
Sbjct: 1558 -DGGEMQDFAFGEDGDDTIRGLYGNDVIDGGAGNDLLYGGDNYWQNSYDGNDTISGGAGN 1616
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ + G D G +++ + G+ +
Sbjct: 1617 DTIDGEAGDDFLNGGSGDDNMFGGYGVIWGYNTIEFSGNDTMFGEDGNDILDGGLDNDSL 1676
Query: 429 HGVKEG---RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
G L ++ + L+ + D+ +
Sbjct: 1677 DGGAGNDYLEGGAGDDFLRDLSGNNTLMGGAGNDYLDGGAENDYLDGGEGADTLL 1731
Score = 58.3 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 59/480 (12%), Positives = 109/480 (22%), Gaps = 31/480 (6%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ N +S D G G ++
Sbjct: 575 GAGDINGTGNTLDNVITGNSGNNTLSGGAGNDTLNGGAGIDSMAGGTG------------ 622
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
V + V + F + DIV +
Sbjct: 623 -NDTYYVNDPGDVVTETSGGGTADHVYASFSYTLTDNSYIENLTLQEGAGDIVGI----- 676
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ T+ G D LD + D +++ G
Sbjct: 677 GNASDNVLTGSNGNNTLDGALGNDTLDGGAGSDYLDGGAGDDWLSDED-AGGGSNTLDGG 735
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N T+ +SV G +G+D++ A V G DV DG G T+ S
Sbjct: 736 DGNDTVDAGYGTQSVTGGAGDDILSVYEATGVLDGGDGADVLDGEYG--TYTMTGGSGND 793
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+Y + + + ++ + + LE S L +G
Sbjct: 794 DLYGYYFGGTMSGGADDDNMYVG------YGSGTVTMTGDGGNDTLEGQNSTAVLSGDLG 847
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
DV ++ Y EG D N G E
Sbjct: 848 NDVVDARHGTYTLTGGEGDDEVSADDATGVLEGGSGNDVVDGEYGTYTMTGGTGNDEMYG 907
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDH----FSNFGCEEGRFVTFDSYLYLGSY 492
+ + + + + + G + G + G
Sbjct: 908 YYFSGNMSGNEDDDLMYVGYGEGASVTMSGGSGNDTLIGDLGGTYQMAGDAGNDELYGYT 967
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G+ + + + LE ++ + + AG D
Sbjct: 968 GNDTLDGGAGSDSLDGGAGNDWLSDEDAGGGSNTLEGGDGNDTVDAGYGTQSVTGGAGDD 1027
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 50/329 (15%), Positives = 85/329 (25%), Gaps = 35/329 (10%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L + G N T S ++ G N T+ +S+ G GND + G++ ++
Sbjct: 161 YSLDITGTPGNDALTGTSSADTMYGLAGNDTLNGAGGNDSIDGGEGNDSLNGSTGDDTLI 220
Query: 291 ESSGNDVFDGSSGLDT--------FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
SGND +G SG D+ +Y + + ++ +VE
Sbjct: 221 GGSGNDTLNGGSGNDSMVGGSGNDIYYVDSLGDGVLEGLDEGTDRVYSSLAAYTLSDNVE 280
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
L + + S L G D G + D+
Sbjct: 281 NLNLQGAAFHGTGNDLDNSIVGNNSSNSLDGGEGNDSLSGSAGDDTLIGGPG--LGNDTL 338
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
D + G+D YI S D I D
Sbjct: 339 NGGSGSDSMVGGSGNDT------------------------YYIDSGTDEIVESLDGGTD 374
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
+ + L Y +L + + + Y G D
Sbjct: 375 RVYSSLISYDMEANVENLI-LQDGDALFGYGNLLDNSITGNDSDNVLYGGDGNDSLNGGD 433
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGK 551
+L ++ L + G
Sbjct: 434 GNDSLNGGNHNDSLNGGNGNDLLDGGEGN 462
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 52/322 (16%), Positives = 91/322 (28%), Gaps = 9/322 (2%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + G G + + +A + G
Sbjct: 825 TGDGGNDTLEGQNSTAVLSGDLGNDVVDARHGTYTLTGGEGDDEVSADDATGVLEGGSGN 884
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G Y + G + E + S D +M +G A+ +S +
Sbjct: 885 DVVDGEYGTYTMTGGTGNDEMYGYYFSGNMSGNEDDDLMYVGYGEGASVTMSGGSGNDTL 944
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G G+ + T+ G D LD + D +++
Sbjct: 945 IGDLGGTYQMAGDAGNDELYGYTGNDTLDGGAGSDSLDGGAGNDWLSDED-AGGGSNTLE 1003
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N T+ +SV G +G+D++ A V G DV DG G T+ S
Sbjct: 1004 GGDGNDTVDAGYGTQSVTGGAGDDILSVYEATGVLDGGDGADVLDGEYG--TYTMTGGSG 1061
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+Y + + + ++ + + LE S L
Sbjct: 1062 NDDLYGYYFGGTMSGGADDDNMYVG------YGSGTVTMTGDGGNDTLEGQNSTAVLSGD 1115
Query: 375 IGQDVFESMKHFYEFGLSEGRD 396
G D+ ++ Y EG D
Sbjct: 1116 AGDDLVDARHGTYTLTGGEGDD 1137
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 48/345 (13%), Positives = 87/345 (25%), Gaps = 49/345 (14%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S S + + G D + D G G + + + G
Sbjct: 1476 SGGSGNDTMLGDLGGTYLMAGDEGNDELYGYTGNDTLDGGAGNDLVAGASGNDLLYGNEG 1535
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
S GG+ + + NDS M F + D G ++
Sbjct: 1536 ---DDSVYGGFGINTLYGGSGNDSVDGGEMQDFAFGEDGDDTIRGLYGNDVIDGGAGNDL 1592
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+YG Q TI G+D +D +
Sbjct: 1593 LYGGD-----------NYWQNSYDGNDTISGGAGNDTID-------------GEAGDDFL 1628
Query: 254 GGYEKNMTIAQHTVI---ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G + + + + + SGND + G N++ ND DG +G D +
Sbjct: 1629 NGGSGDDNMFGGYGVIWGYNTIEFSGNDTMFGEDGNDILDGGLDNDSLDGGAGND--YLE 1686
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + + + L+ +
Sbjct: 1687 GGAGDDFLRDLSGNNTLMGGAGNDY-----------------LDGGAENDYLDGGEGADT 1729
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
L+ G DV ++ G D S+ D+ +
Sbjct: 1730 LLGWDGNDVLLFDENDAVIDGGNGIDTLILGTDASYSFSDIVSDV 1774
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 57/493 (11%), Positives = 120/493 (24%), Gaps = 22/493 (4%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINF-DKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + + + ++ G G T+ + + G
Sbjct: 1236 DTGNDTLDGGAGSDYLDGGAGDDWLSDEDAEGGSNTLDGGDGNDTVDAGYGTQSVTGGAG 1295
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
Y + G D D + + + + +D +
Sbjct: 1296 DDILSVYEATGVLDGGDGADVLDGEYGTYTMTGGSGNDDLYGYYFGGTMSGGADDDNMYV 1355
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTE 248
YG+ ++ + + + G+D++D TL GG + +
Sbjct: 1356 GYGSGTVTMTGD--GGNDTLEGQNSTAVLSGDLGNDVVDARHGTYTLTGGEGDDEVSADD 1413
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ + G N + ++ G +GND + G + + ND G
Sbjct: 1414 ATGVLEGGSGNDVVDGEYGTYTMTGGTGNDEMYGYYFSGSMSGNEDNDNMYVGFGEGASV 1473
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYT 365
+ + A + D L + + L +L
Sbjct: 1474 TMSGGSGNDTMLGDLGGTYLMAGDEGNDELYGYTGNDTLDGGAGNDLVAGASGNDLLYGN 1533
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ + G + E +D F N
Sbjct: 1534 EGDDSVYGGFGINTLYGGSGNDSVDGGEMQDFAFGEDGDDTIRGLYGNDVIDGGAGNDLL 1593
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN-----FGCEEGRF 480
Y + + D + A ++ + D G D+ +G F
Sbjct: 1594 YGGDNYWQN-SYDGNDTISGGAGNDTIDGEAGDDFLNGGSGDDNMFGGYGVIWGYNTIEF 1652
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
D+ D L +D + EG D F ++ + L+
Sbjct: 1653 SGNDTMFGEDGNDILDGGLDNDSLDGGA---GNDYLEGGAGDDFLRD--LSGNNTLMGGA 1707
Query: 541 ADAPDLVQAGKDH 553
+ A D+
Sbjct: 1708 GNDYLDGGAENDY 1720
>gi|149188919|ref|ZP_01867209.1| RTX toxins and related Ca2+-binding protein [Vibrio shilonii AK1]
gi|148837339|gb|EDL54286.1| RTX toxins and related Ca2+-binding protein [Vibrio shilonii AK1]
Length = 737
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/332 (14%), Positives = 93/332 (28%), Gaps = 26/332 (7%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG--------NDVVI 281
+ + + + + G + T+ T + ++G +G NDV+
Sbjct: 333 TFTWMRGHNAGDNLTAHDGVDTIMVGMHGHDTLNGGTGNDVLLGDNGTNFHYQGGNDVLN 392
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + N++ +GND +G G DT + Y ++ + D L ++
Sbjct: 393 GGAGNDILVGGAGNDTLNGGEGEDTAAFSGSVIEYHFM-NRLTVVDKVSGRDGTDQLKEI 451
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFGLSEGRDITFD 400
E F+D +Y++L+ G D + G D+
Sbjct: 452 ENASFSDGTYALKI--------GHNAYDNLVAQDGVDTLLVGADGDDKLTGGNGNDVLIG 503
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+Y+ + G+ I G + A ++A H +
Sbjct: 504 DNSIDDTYNAGNDALDGGAGS---DIILAGGGDDYIRADEYAPAHLAIHAESDVINGGDG 560
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
D F N + V D++ D G +
Sbjct: 561 VDTLWYNDTFKNADSLNVKVVDEDTFSV-----DTMLAGSVTSTDTVTSVEVLYGTRGDD 615
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
F L + ++ D + D
Sbjct: 616 VIDFSGLGHGMTYNDKSSGAGQDEVTGSDYND 647
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 54/380 (14%), Positives = 103/380 (27%), Gaps = 32/380 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG--------TILSHNALH 126
++ +N +D + + D G G
Sbjct: 330 DEGTFTWMRGHNAGDNLTAHDGVDTIMVGMHGHDTLNGGTGNDVLLGDNGTNFHYQGGND 389
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
+ G G + G + + + + +FM + +++D G T +
Sbjct: 390 VLNGGAGNDILVGGAGNDTLNGGEGEDTAAFSGSVIEYHFMNRLTVVDKVSGRDGTDQLK 449
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+I G +G+N Y V Q + D D L GG N + +
Sbjct: 450 EIENASFSDGTYALKIGHNAYDNLVAQDGVDTLLVGADG------DDKLTGGNGNDVLIG 503
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS-ANNVFFESSGNDVFDGSSGLD 305
S N + + ++ G+D + + A + +DV +G G+D
Sbjct: 504 DNSIDDTY-NAGNDALDGGAGSDIILAGGGDDYIRADEYAPAHLAIHAESDVINGGDGVD 562
Query: 306 TFFYYAPSYLY-------KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
T +Y + + + D ++ VE L
Sbjct: 563 TLWYNDTFKNADSLNVKVVDEDTFSVDTMLAGSVTSTDTVTSVEVLYGTRGDDVIDFSG- 621
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
L + +Y D GQD + + G D +Y + D +
Sbjct: 622 ---LGHGMTYNDKSSGAGQDEVTGSDYNDIIKVMNG-----DDTVYASNGQDYVDGGHGQ 673
Query: 419 RGAAARHYITHGVKEGRNPD 438
+ E P
Sbjct: 674 DKLVFDAATANIHVEANGPA 693
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 33/85 (38%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + I ++V G GND++ GN ++ G+D+ G G D + +
Sbjct: 20 GGLGDDHILGKQGNDTVNGQRGNDILEGNRGDDKVNGEGGDDLIFGGVGNDIVSGGSGAD 79
Query: 315 LYKIYRFENAIIVYDANEHKQDFLS 339
++ + V E +D L
Sbjct: 80 VFSMRILRGGDNVIKDFELGEDSLQ 104
Score = 44.4 bits (103), Expect = 0.056, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
I G + N T+ + + G+ G+D V G +++ F GND+ G SG D F
Sbjct: 23 GDDHILGKQGNDTVNGQRGNDILEGNRGDDKVNGEGGDDLIFGGVGNDIVSGGSGADVF 81
Score = 42.1 bits (97), Expect = 0.34, Method: Composition-based stats.
Identities = 52/304 (17%), Positives = 111/304 (36%), Gaps = 41/304 (13%)
Query: 72 ETSIHSDIKFIS--SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
E + SD + +N Y D + + D D G G ++ N++ +
Sbjct: 452 ENASFSDGTYALKIGHNAYDNLVAQDGVDTLLVGADGDDKLTGGNGNDVLIGDNSIDDTY 511
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYEN-DSFLTSVMSYFMPQDSMMDASF----GYCATPM 184
+A G + G +DY D + + ++ D + Y T
Sbjct: 512 NAGNDALDGGAGSDIILAGGGDDYIRADEYAPAHLAIHAESDVINGGDGVDTLWYNDTFK 571
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS-PFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+D + V+ + + + V D+ ++ +Y + GDD++D + +G Y
Sbjct: 572 NADSLNVKVV--DEDTFSVDTMLAGSVTSTDTVTSVEVLYGTRGDDVIDFSGLGHGMTYN 629
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
D ++ + + V GS ND++ + ++ + S+G D DG G
Sbjct: 630 DKSSGAGQ-----------------DEVTGSDYNDIIKVMNGDDTVYASNGQDYVDGGHG 672
Query: 304 LDTFFYYAPSYLYKIYR-----------FENAIIVYDANEHKQDFLS---DVERLRFADQ 349
D + A + + ++++++V + + D + +VE++ D
Sbjct: 673 QDKLVFDAATANIHVEANGPAYMQEYKVYDSSLVVNNDADIDNDIFTIVKNVEQVHGNDG 732
Query: 350 CIDS 353
ID
Sbjct: 733 YIDI 736
>gi|121609533|ref|YP_997340.1| hemolysin-type calcium-binding region [Verminephrobacter eiseniae
EF01-2]
gi|121554173|gb|ABM58322.1| Hemolysin-type calcium-binding region [Verminephrobacter eiseniae
EF01-2]
Length = 1383
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/308 (15%), Positives = 89/308 (28%), Gaps = 50/308 (16%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL--------- 134
S + R + AD G G IL + HA+GL
Sbjct: 985 SGEAGADSLHGSRRSDVLFGGAGADTIDGGAGADLILGDAQYTPLSHAIGLPSSTTTQSF 1044
Query: 135 ------------MHPGSYNGGYPVYGV----DNDYENDSFLTSVMSYFMPQDSMMDASFG 178
P Y + D + + ++ + S AS G
Sbjct: 1045 VWSSSAGSMVSQSSPEDYTVNPVMVASGRAFDWTWARSNGDYTLTAAARLIVSQRLASNG 1104
Query: 179 YCATP---MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT------IYDSGGDD 229
+D +A Q +G G+++ + + + +Y GDD
Sbjct: 1105 GADNMNGGQGNDWMAGQTGNDTMRGGAGDDVMYGDDNAATTAMAEADAGQDLMYGDDGDD 1164
Query: 230 LLD--------------LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ L G + I + G + + + + G
Sbjct: 1165 QMYGGAKDDDMDGGAGDDQLSGEAGSDILHGGSGNDDLSGNAGDDLLKGGEGNDHLRGGQ 1224
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEH 333
G D + G + ++ +G+DV +G +G D + Y+ R A + D +
Sbjct: 1225 GRDQLHGEAGDDRLEGGAGDDVLEGGAGTDHLDGGSGDDRYQFGRGAGADTITDTAGSAD 1284
Query: 334 KQDFLSDV 341
+ ++V
Sbjct: 1285 ELTIGANV 1292
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/344 (13%), Positives = 94/344 (27%), Gaps = 22/344 (6%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
G T + + D++DV G G + +
Sbjct: 927 TGATGTSPTATDNDIAFGGDESDVLMGGAGDDQVWGGRDNEAENATTAADSDSRGDW--- 983
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA---VQKIYGAPKGSL 202
V + DS S S + + D G ++ + G P +
Sbjct: 984 ---VSGEAGADSLHGSRRSDVLFGGAGADTIDGGAGADLILGDAQYTPLSHAIGLPSSTT 1040
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNMT 261
+ + D + ++ + + N + + ++ +
Sbjct: 1041 T-QSFVWSSSAGSMVSQSSPEDYTVNPVMVASGRAFDWTWARSNGDYTLTAAARLIVSQR 1099
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+A + +++ G GND + G + N+ +G+DV G T +
Sbjct: 1100 LASNGGADNMNGGQGNDWMAGQTGNDTMRGGAGDDVMYGDDNAATTAMAEADAGQDLMYG 1159
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
++ D + + + IL + +DL G D+ +
Sbjct: 1160 DDGDDQMYGGAKDDDMDGGAGDDQLSGEA-------GSDILHGGSGNDDLSGNAGDDLLK 1212
Query: 382 SMKHFYEFGLSEGRDIT----FDSYLYLGSYDDLRNVFGSDRGA 421
+ +GRD D L G+ DD+
Sbjct: 1213 GGEGNDHLRGGQGRDQLHGEAGDDRLEGGAGDDVLEGGAGTDHL 1256
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 65/537 (12%), Positives = 117/537 (21%), Gaps = 83/537 (15%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S ++ +D G G T +G +
Sbjct: 708 YGGAGDDRLSGFDGADHLEGNAGNDTLDGGAGSDTLVGGTGNDTYRLQTGT--VGIDTLV 765
Query: 135 MHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM--------------DASF 177
G G V G E T + + DA+
Sbjct: 766 DTQGDNVIEVNGGVVQGEFCRVEGMDEQTYYSTGNNSDRTYQLRSTGDGVWRLCVRDAAG 825
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNN------IYKIEVQQKDSPFIQTIYDSGGDDLL 231
Y A + D + Q LG + + G
Sbjct: 826 AYNAVADLKDWRSGQYGLTLGTDILGPDRILLHLPLSTNYMAFNGAQAPRGVSFSGGSRS 885
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS--------GNDVVIGN 283
+ + ID + + + + + + + ND+ G
Sbjct: 886 NSFEGSAYADVIDTGGGLSNYVSTAGGDDRVIGGAGRDFIRTGATGTSPTATDNDIAFGG 945
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
++V +G+D G + ++ + + E D L R
Sbjct: 946 DESDVLMGGAGDDQVWGGR-------DNEAENATTAADSDSRGDWVSGEAGADSLHGSRR 998
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG---RDITFD 400
+L A + + G D+ + + G T
Sbjct: 999 ---------------SDVLFGGAGADTIDGGAGADLILGDAQYTPLSHAIGLPSSTTTQS 1043
Query: 401 SYLYLGSYDDLRNVFGSD------RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
+ + D A+ R + + + A I S N
Sbjct: 1044 FVWSSSAGSMVSQSSPEDYTVNPVMVASGRAFDWTWARSNGDYTLTAAARLIVSQRLASN 1103
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
AD + Q G + R D +Y + +D G Y G
Sbjct: 1104 GGADNMNGGQGNDWMAGQTGNDTMRGGAGDDVMYGDDNAATTAMAEADAGQDLM-YGDDG 1162
Query: 515 VKEGRNPD------------------AFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ L + ++DL D G DH
Sbjct: 1163 DDQMYGGAKDDDMDGGAGDDQLSGEAGSDILHGGSGNDDLSGNAGDDLLKGGEGNDH 1219
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 61/421 (14%), Positives = 99/421 (23%), Gaps = 66/421 (15%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL----TLIGGVKNYIDLNTESWS 251
G+ + + + + + G D + T N I +
Sbjct: 890 GSAYADVIDTGGGLSNYVSTAGGDDRVIGGAGRDFIRTGATGTSPTATDNDIAFGGDESD 949
Query: 252 SIGGYEKNMTIAQHTVIE---------------SVVGSSGNDVVIGNSANNVFFESSGND 296
+ G + + E V G +G D + G+ ++V F +G D
Sbjct: 950 VLMGGAGDDQVWGGRDNEAENATTAADSDSRGDWVSGEAGADSLHGSRRSDVLFGGAGAD 1009
Query: 297 VFDGSSGLDTFFYYA---------------PSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
DG +G D A + + +++ + E V
Sbjct: 1010 TIDGGAGADLILGDAQYTPLSHAIGLPSSTTTQSFVWSSSAGSMVSQSSPEDYTVNPVMV 1069
Query: 342 ERLRFADQC--IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
R D + + + S L G D + G D
Sbjct: 1070 ASGRAFDWTWARSNGDYTLTAAARLIVSQ-RLASNGGADNMNGGQGNDWMAGQTGNDTMR 1128
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
Y D + A A + +G D Y + +D ++ A
Sbjct: 1129 GGAGDDVMYGDDNAATTAMAEADAGQDLMYG-------DDGDDQMYGGAKDDDMDGGAGD 1181
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
L + G DDL G D G R
Sbjct: 1182 DQLSGEAGSDILHGGS---------------GNDDLSGNAGDDLLKGGE-----GNDHLR 1221
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDL 579
L A + L D AG DH G F + D
Sbjct: 1222 GGQGRDQLHGEAGDDRLEGGAGDDVLEGGAGTDH--LDGGSGDDRYQFGRGAGADTITDT 1279
Query: 580 W 580
Sbjct: 1280 A 1280
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/332 (12%), Positives = 93/332 (28%), Gaps = 31/332 (9%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFEN 323
+++ + + G +G+D + G + ++GND DG +G DT + Y++
Sbjct: 701 NSLGDHLYGGAGDDRLSGFDGADHLEGNAGNDTLDGGAGSDTLVGGTGNDTYRLQTGTVG 760
Query: 324 AIIVYDANEHKQDFLSD------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQ---- 373
+ D ++ R+ D+ S D +
Sbjct: 761 IDTLVDTQGDNVIEVNGGVVQGEFCRVEGMDEQTYYSTGNNSDRTYQLRSTGDGVWRLCV 820
Query: 374 -------VIGQDVFESMKHFYEFGLSEGRDITFDSYLYL-----GSYDDLRNVFGSDRGA 421
D+ + ++GL+ G DI + L +Y +
Sbjct: 821 RDAAGAYNAVADLKDWRSG--QYGLTLGTDILGPDRILLHLPLSTNYMAFNGAQAPRGVS 878
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ ++ + D ++++ + A D + G+D
Sbjct: 879 FSGGSRSNSFEGSAYADVIDTGGGLSNY--VSTAGGDDRVIGGAGRDFIRTGATGTSPTA 936
Query: 482 TFDSYLYLGSYDDLRNVFGSDRG--AAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
T + + G D+ D + + + + A + L +
Sbjct: 937 TDNDIAFGGDESDVLMGGAGDDQVWGGRDNEAENATTAADSDSRGDWVSGEAGADSLHGS 996
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
AG D + G I +
Sbjct: 997 RRSDVLFGGAGAD--TIDGGAGADLILGDAQY 1026
>gi|259417266|ref|ZP_05741185.1| hemolysin-type calcium-binding region [Silicibacter sp. TrichCH4B]
gi|259346172|gb|EEW57986.1| hemolysin-type calcium-binding region [Silicibacter sp. TrichCH4B]
Length = 741
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/370 (13%), Positives = 90/370 (24%), Gaps = 53/370 (14%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ D I+ N+ D I D G TI + G
Sbjct: 76 TSLDDFNIITGNDASDYIEASDGD-DSLIGAGGDDTLSGDQGDDTIDGGEGNDNLAGGDG 134
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ G VY + S + + A D +
Sbjct: 135 QDSILAGAGNDSVYADNVWATLSSAASGTGTTPTSLTVTNSADG--PIELWWVDGAGQLQ 192
Query: 194 IY-----GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
Y G Y E++ D ++ TI G + ++ G
Sbjct: 193 YYATIQPGDTLTQSTYEEYNWELRHPDDWYLGTI-QGGANPTVNFGASGLNDTVF--AGS 249
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN------------------SANNVFF 290
+ G + I T +++ G G+D + +++
Sbjct: 250 GDDLVLGMYGDDVIYGETGADTLDGDYGDDTIWAGTDADTVDGGDGDDYLSGQEGDDLIQ 309
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV------ERL 344
+G+D G +G D A ++I+ + D L D+ +
Sbjct: 310 GGAGSDTLIGGTGNDELKGDADDDTFQIFDNSGVDTIIGGESGVDDDLVDLSGRSSGASV 369
Query: 345 RFADQCIDSVNVK----------------QRSILEYTASYE--DLIQVIGQDVFESMKHF 386
F I + L+ +AS ++ G D
Sbjct: 370 NFTGAEIGIIEGGSDTAYFQEIERLRLTDFDDSLDASASSAGVNVDAGAGADTLTGSAGD 429
Query: 387 YEFGLSEGRD 396
G D
Sbjct: 430 DSLTGGGGDD 439
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 51/434 (11%), Positives = 104/434 (23%), Gaps = 47/434 (10%)
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI 219
T ++ D +S + D A+ Y + I + +
Sbjct: 3 TYSVTSANYNDPGFWSSISESSDGHWLDFRALPSTYYVNIDAEARIISIWD----GGAWY 58
Query: 220 QTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ D G +L + ++ I ++ I + + ++ +++ G G+D
Sbjct: 59 RVGEDGNGSTDSNLGSPTSLDDFNIITGNDASDYIEASDGDDSLIGAGGDDTLSGDQGDD 118
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP----SYLYKIYRFENAIIVYDANEHK 334
+ G N+ G D +G D+ + S + +
Sbjct: 119 TIDGGEGNDNLAGGDGQDSILAGAGNDSVYADNVWATLSSAASGTGTTPTSLTVTNSADG 178
Query: 335 ---------------------QDFLS-------DVERLRFADQCIDSVNVKQRSILEYTA 366
D L+ + E D + ++ + + A
Sbjct: 179 PIELWWVDGAGQLQYYATIQPGDTLTQSTYEEYNWELRHPDDWYLGTIQGGANPTVNFGA 238
Query: 367 S--YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
S + + G D+ M G D Y +
Sbjct: 239 SGLNDTVFAGSGDDLVLGMYGDDVIYGETGADTLDGDYGDDTIWAGTDADTVDGGDGDDY 298
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG---RFV 481
G + L +++L D + + G E G V
Sbjct: 299 LSGQEGDDLIQGGAGSDTLIGGTGNDELKGDADDDTFQIFDNSGVDTIIGGESGVDDDLV 358
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE---DLIN 538
S + G G + Y E F ++ ++
Sbjct: 359 DLSGRSSGASVNFTGAEIGIIEGGSDTAYFQ--EIERLRLTDFDDSLDASASSAGVNVDA 416
Query: 539 AFADAPDLVQAGKD 552
AG D
Sbjct: 417 GAGADTLTGSAGDD 430
>gi|158147670|emb|CAM84377.1| hemolysin HlyA [Escherichia coli]
Length = 1024
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 44/151 (29%), Gaps = 25/151 (16%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + N + +++ G +G+D + G N+ +GN
Sbjct: 732 FGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGN 791
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D S +V L
Sbjct: 792 NYLNGGDGDDELQVQGNS-----------------------LAKNV--LSGGKGNDKLYG 826
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ +L+ + L G D++ + +
Sbjct: 827 SEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 857
Score = 38.2 bits (87), Expect = 4.4, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 79/287 (27%), Gaps = 24/287 (8%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------APSYLYKIYRFENAIIV 327
G+D V ++ + + G+DV DT + + Y + R +
Sbjct: 617 GDGDDKVFLSAGSANIYAGKGHDVVYY-DKTDTGYLTIDGTKATEAGNYTVTRVLGGDVK 675
Query: 328 YDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E + E+ ++ +N K + + S E+LI D F K
Sbjct: 676 VLQEVVKEQEVSVGKRTEKTQYRSYEFTHINGKNLTETDNLYSVEELIGTTRADKFFGSK 735
Query: 385 HFYEFGLSEGRD----ITFDSYLYLGSYDDLRNV-------FGSDRGAAARHYITHGVKE 433
F ++G D + LY +D + +G D +
Sbjct: 736 FTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGNNYLN 795
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV---TFDSYLYLG 490
G + D ++ + +++++ L + G D Y YL
Sbjct: 796 GGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLS 855
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
Y + + + Y A L
Sbjct: 856 GYGHHIIDDDGGKDDKLSLADIDFRDVAFRREGNDLIMYKAEGNVLS 902
>gi|78189852|ref|YP_380190.1| Nidogen, extracellular region [Chlorobium chlorochromatii CaD3]
gi|78172051|gb|ABB29147.1| Nidogen, extracellular region [Chlorobium chlorochromatii CaD3]
Length = 1557
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 92/279 (32%), Gaps = 27/279 (9%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
Y+ T R + + D+ TI + + + G
Sbjct: 230 TGEAGSYLFTVRNSQEVGVLNGTEGDDLLAGSTMHDTIYGFAGNDYL-----IGNSGDDL 284
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ +T D D F + +++ ++ A +
Sbjct: 285 LVGGAGDDTYTVDEGDIIT------EEVDGGFDTIFAATTYTLPNNVEVLRLTGAASVNA 338
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+GNN I V + G D +D + + ++L + SIGGYE + T
Sbjct: 339 IGNNGDNIFVGNIGNNLFD---GGDGFDTVDYS-RSRSEITVNLTQTTPYSIGGYEGSDT 394
Query: 262 ------IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ T + + G++ +++ GN+ + + GND DG G+DT +
Sbjct: 395 FLRIENLYGSTYSDYLQGNNSENILRGNAGADTLQGNGGNDTLDGGDGVDTIWLANSFSE 454
Query: 316 YKIYRFENAIIV------YDANEHKQDFLSDVERLRFAD 348
Y I + + + D L VE LRF+D
Sbjct: 455 YTITYNAASGFLQSVHNSTIESSDGIDSLRYVEYLRFSD 493
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/255 (14%), Positives = 81/255 (31%), Gaps = 11/255 (4%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G +L G + L+T + ++ T+ + + G+ G+D++ G++
Sbjct: 203 GDGSAWYELPQSGNQDAMLSLDTSAGNTGEAGSYLFTVRNSQEVGVLNGTEGDDLLAGST 262
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE------NAIIVYDANEHKQDFL 338
++ + +GND G+SG D A Y + + +
Sbjct: 263 MHDTIYGFAGNDYLIGNSGDDLLVGGAGDDTYTVDEGDIITEEVDGGFDTIFAATTYTLP 322
Query: 339 SDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
++VE LR ++++ +I G D + + E ++ +
Sbjct: 323 NNVEVLRLTGAASVNAIGNNGDNIFVGNIGNNLFDGGDGFDTVDYSRSRSEITVNLTQTT 382
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG--RNPDAFKALEYIASHEDLINA 455
+ Y GS D + G+ Y+ E R L+ ++ L
Sbjct: 383 PYSIGGYEGS--DTFLRIENLYGSTYSDYLQGNNSENILRGNAGADTLQGNGGNDTLDGG 440
Query: 456 FADAPDLVQVGKDHF 470
+ +
Sbjct: 441 DGVDTIWLANSFSEY 455
>gi|123197|sp|P08715|HLYAP_ECOLX RecName: Full=Hemolysin, plasmid
gi|150682|gb|AAA98233.1| hemolysin A [Escherichia coli]
Length = 1024
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 59/199 (29%), Gaps = 34/199 (17%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + N + +++ G +G+D + G N+ +GN
Sbjct: 732 FGSKFTDIFHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGVAGN 791
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D F S +V L
Sbjct: 792 NYLNGGDGDDEFQVQGNS-----------------------LAKNV--LFGGKGNDKLYG 826
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHF-----YEFGLSEGR----DITFDSYLYLG 406
+ +L+ + L G D++ + + + G E + DI F +
Sbjct: 827 SEGADLLDGGEGDDLLKGGYGNDIYRYLSGYGHHIIDDDGGKEDKLSLADIDFRDVAFKR 886
Query: 407 SYDDLRNVFGSDRGAAARH 425
+DL G + H
Sbjct: 887 EGNDLIMYKGEGNVLSIGH 905
>gi|288575654|ref|ZP_06393871.1| iron-regulated protein FrpC [Neisseria mucosa ATCC 25996]
gi|288567422|gb|EFC88982.1| iron-regulated protein FrpC [Neisseria mucosa ATCC 25996]
Length = 920
Score = 72.1 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/263 (12%), Positives = 74/263 (28%), Gaps = 24/263 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH-----NALHEIG 129
S G + D G G + + E G
Sbjct: 615 TGGAGDDAISGYGGNDILHGGAGNDTLQGGAGKDTLAGGAGDDRLYGGSSEADTYVFEKG 674
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM------SYFMPQDSMMDASFGYCATP 183
H ++ +Y + N + + + + +D++ + ++
Sbjct: 675 HGKDVVSDSAYQAAHTDTLRFNGAKFAEAVFTRSGNNLVIKAYGGEDAVTVQGYFDSSSY 734
Query: 184 MVSDIV------AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
D + + G +G + + G+D L G
Sbjct: 735 RYYDFAFDDKTVTAKDMAGMKVEGVGTD---GNESLYGWDTADVLDGGKGNDYL----SG 787
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ + E S+ G E T+ + + + G G D++ G N+ G+D+
Sbjct: 788 YNGDDLLKGGEGNDSLYGGEGVDTLEGNAGNDYLSGEKGADILKGGEGNDELHGGEGSDI 847
Query: 298 FDGSSGLDTFFYYAPSYLYKIYR 320
+G +G D + + ++
Sbjct: 848 LNGGAGDDRLYGGSSEADTYVFE 870
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/288 (13%), Positives = 68/288 (23%), Gaps = 53/288 (18%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G K+ E + I G + I+ + + + G +GND + G + + +G+
Sbjct: 597 TGTEKDDTLYGNELANFITGGAGDDAISGYGGNDILHGGAGNDTLQGGAGKDTLAGGAGD 656
Query: 296 DVFDGSSG-LDTFFYYAP-------------------------SYLYKIYRFENAIIVYD 329
D G S DT+ + R N +++
Sbjct: 657 DRLYGGSSEADTYVFEKGHGKDVVSDSAYQAAHTDTLRFNGAKFAEAVFTRSGNNLVIKA 716
Query: 330 ANEHKQDFLSDVE--------RLRFADQC----------IDSVNVKQRSILEYTASYEDL 371
+ F D+ ++ V L + + L
Sbjct: 717 YGGEDAVTVQGYFDSSSYRYYDFAFDDKTVTAKDMAGMKVEGVGTDGNESLYGWDTADVL 776
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D EG D LY G D + G
Sbjct: 777 DGGKGNDYLSGYNGDDLLKGGEGND-----SLYGGEGVDTLEGNAGNDYL----SGEKGA 827
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ + L + L D + F R
Sbjct: 828 DILKGGEGNDELHGGEGSDILNGGAGDDRLYGGSSEADTYVFEKATAR 875
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 75/260 (28%), Gaps = 12/260 (4%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
TE ++ G E I +++ G GND++ G + N+ +G D G +G D
Sbjct: 598 GTEKDDTLYGNELANFITGGAGDDAISGYGGNDILHGGAGNDTLQGGAGKDTLAGGAGDD 657
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + ++ + V + ++ + + LRF K +
Sbjct: 658 RLYGGSSEADTYVFEKGHGKDVVSDSAYQ---AAHTDTLRFN-------GAKFAEAVFTR 707
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ +I+ G + +++ +++ D FD V G
Sbjct: 708 SGNNLVIKAYGGEDAVTVQGYFDSSSYRYYDFAFDDKTVTAKDMAGMKVEGVGTDGNESL 767
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE--GRFVTF 483
Y L + L + G D +
Sbjct: 768 YGWDTADVLDGGKGNDYLSGYNGDDLLKGGEGNDSLYGGEGVDTLEGNAGNDYLSGEKGA 827
Query: 484 DSYLYLGSYDDLRNVFGSDR 503
D D+L GSD
Sbjct: 828 DILKGGEGNDELHGGEGSDI 847
Score = 45.5 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 35/242 (14%), Positives = 56/242 (23%), Gaps = 22/242 (9%)
Query: 331 NEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
K D L E F IL A + L G+D
Sbjct: 598 GTEKDDTLYGNELANFITGGAGDDAISGYGGNDILHGGAGNDTLQGGAGKDTLAGGAGDD 657
Query: 388 EF--GLSEGRDITF---------DSYLYLGSYDDLRNVFGSDRGAAA----RHYITHGVK 432
G SE F Y ++ D G+ A + +
Sbjct: 658 RLYGGSSEADTYVFEKGHGKDVVSDSAYQAAHTDTLRFNGAKFAEAVFTRSGNNLVIKAY 717
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLG 490
G + + +S+ AF D + +G +D+ L
Sbjct: 718 GGEDAVTVQGYFDSSSYRYYDFAFDDKTVTAKDMAGMKVEGVGTDGNESLYGWDTADVLD 777
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+ G + + G + LE A ++ L G
Sbjct: 778 GGKGNDYLSGYNGDDLLK--GGEGNDSLYGGEGVDTLEGNAGNDYLSGEKGADILKGGEG 835
Query: 551 KD 552
D
Sbjct: 836 ND 837
>gi|288557361|ref|NP_001165700.1| matrix metalloproteinase-28 a [Xenopus laevis]
gi|122894094|gb|ABM67693.1| matrix metalloproteinase-28 [Xenopus laevis]
Length = 496
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 63/189 (33%), Gaps = 45/189 (23%)
Query: 30 YKPDVLTTHRLSFDITEL----NPNA-QEVARWALGEWSKVVDLTFEET-SIHSDIK--- 80
K L++ I + + ++ + A WS V LTF E +DI+
Sbjct: 112 SKSKKWYKQHLTYQIVNWPWYLSQHQVRQAVKAAFQLWSNVSSLTFSEALRDPADIRLAF 171
Query: 81 FISSNNGYVCTPRYDSRYF---------MEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
F +N E +FD A+ W GKG L HEIGH
Sbjct: 172 FDGDHNDGAGNAFDGPGGALAHAFFPRRGEAHFDSAEHWSLN-GKGRNLFVVLAHEIGHT 230
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
LGL H N Y + V+++ D++A+
Sbjct: 231 LGLPHSSFKNALMSPYYKKLN------KDYVLNFD--------------------DVLAI 264
Query: 192 QKIYGAPKG 200
Q +YGAP
Sbjct: 265 QNLYGAPPS 273
>gi|254489132|ref|ZP_05102336.1| hemolysin-type calcium-binding protein [Roseobacter sp. GAI101]
gi|214042140|gb|EEB82779.1| hemolysin-type calcium-binding protein [Roseobacter sp. GAI101]
Length = 1081
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 62/436 (14%), Positives = 111/436 (25%), Gaps = 45/436 (10%)
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ ++ +D + + ++ + G T V D GA G+
Sbjct: 348 FGIFDIDQANGFNDEIFVRAYDANNNRVAVNLTAGNSTTLSVDDATGRAYSTGAGVGNT- 406
Query: 204 NNIYKIEVQQKDSPFIQTIYD----SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+++ + P + D + GD + + + I +I G N
Sbjct: 407 DSMTGFVKVEIAGPVARIEIDYNNPNPGDTTHAMRIGDLALSPITTTGAGNDTISGGAGN 466
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI +S+ G + ND + G + N+ +GND G G D F +
Sbjct: 467 DTIFGEAGNDSLSGGADNDSISGGAGNDTILGGTGNDTMSGGDGADLFVAQDGFGTDIVI 526
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-------------QRSILEYTA 366
E + V + S I++ T
Sbjct: 527 GGEGGTDNDTLDFSALTGAVSVNYTGAEAGTVTSGANSVSFSQVENLFLSNFNDIVDATR 586
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
L G D Y+ +G D + + + D GA Y
Sbjct: 587 YAVSLDTGGGADTISVGSGTYDINAGDGDDRIIRTEV----TNSTEAASVIDGGAGTDTY 642
Query: 427 ITHGVKEGRNPDAFKALEYIASHE-DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ G + + F + ++ F +
Sbjct: 643 VAGGALGINTINLAANQLEFQGASRGSLLNFENVELDNIDATVVGNDGANVITATGDFAN 702
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
L G DDL + G D ++ L +
Sbjct: 703 LLSGGGGDDLISAGGGDDTVDGG----------------------TGNDTLDGGLGNDRL 740
Query: 546 LVQAGKDHFSNFGYEE 561
AG D F G +
Sbjct: 741 TGGAGDDVFIYSGGND 756
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/329 (10%), Positives = 81/329 (24%), Gaps = 14/329 (4%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+ D + + + G + ++ G +GND + + F +G+
Sbjct: 168 YVQPDGWFDGSAGADALNSGDFDSEADQIDASANAIDGGAGNDTINAGGGADTVFGGAGD 227
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIY-----------RFENAIIVYDANEHKQDFLSDVERL 344
DV +G +G D + + + A+ + ++ +
Sbjct: 228 DVLNGGAGADLLRGDSSIGAETSFSWASQGIGDGSSVTGGLTGTTASGDIRVAMTVAQEA 287
Query: 345 RFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
F +++ + + L +S G D + + +++ +
Sbjct: 288 NFQSATMETTDQLYDYNGLNDRSSISVFGGAPGADPNTAT--ISINFTALNANVSNEVSK 345
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
D+ G + R Y + + N A + A
Sbjct: 346 VTFGIFDIDQANGFNDEIFVRAYDANNNRVAVNLTAGNSTTLSVDDATGRAYSTGAGVGN 405
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
F Y D + D + G
Sbjct: 406 TDSMTGFVKVEIAGPVARIEIDYNNPNPGDTTHAMRIGDLALSPITTTGAGNDTISGGAG 465
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKD 552
+ A ++ L + AG D
Sbjct: 466 NDTIFGEAGNDSLSGGADNDSISGGAGND 494
>gi|291566643|dbj|BAI88915.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 288
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/228 (16%), Positives = 70/228 (30%), Gaps = 7/228 (3%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G I Q G D+ D G N + SI G E
Sbjct: 15 TANGAVIVGSPNQSNRIRGTADAIRIQGGDMADTLTAGDNPNMVIYGFSGNDSIVGGEGG 74
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + +++ G +GN+++ G +++ + GN G G DT S +
Sbjct: 75 NELYGNQGNDTIYGIAGNNLIYGGQGDDLIYGGDGNSSLSGDKGNDTLV--GGSGNDIMR 132
Query: 320 RFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ ++ + + F + L+ + +++ + L G D
Sbjct: 133 GGDGDDLLIGGDGNDLLFGEKGNDTLQGGPGNDTMYGGQGDDLIQGGDGNDFLAGDKGND 192
Query: 379 VFESMKHFYEFGL----SEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
F L + RD+ D G LR G + +
Sbjct: 193 TLTGGAGADTFALTANPNLSRDVITDFNSAEGDVIALRAGAGYNLDSF 240
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 15/168 (8%)
Query: 184 MVSDIVAVQKIYGAPKGSLGNN----IYKI--EVQQKDSPFIQTIYDSGGDDLLDLT--- 234
+D + +Q A + G+N IY +Y + G+D +
Sbjct: 33 GTADAIRIQGGDMADTLTAGDNPNMVIYGFSGNDSIVGGEGGNELYGNQGNDTIYGIAGN 92
Query: 235 --LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ GG + + + SS+ G + N T+ + + + G G+D++IG N++ F
Sbjct: 93 NLIYGGQGDDLIYGGDGNSSLSGDKGNDTLVGGSGNDIMRGGDGDDLLIGGDGNDLLFGE 152
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
GND G G DT + I + + A + D L+
Sbjct: 153 KGNDTLQGGPGNDTMY--GGQGDDLIQGGDGND--FLAGDKGNDTLTG 196
Score = 45.5 bits (106), Expect = 0.026, Method: Composition-based stats.
Identities = 35/228 (15%), Positives = 62/228 (27%), Gaps = 23/228 (10%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF--------FYYAPSYLYK 317
T + V ++G +V + +N ++ G DT Y S
Sbjct: 8 TEFQVVFTANGAVIVGSPNQSNRIRGTADAIRIQGGDMADTLTAGDNPNMVIYGFSGNDS 67
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIG 376
I E +Y + + L + S L + L+ G
Sbjct: 68 IVGGEGGNELYGNQGNDTIYGIAGNNLIYGGQGDDLIYGGDGNSSLSGDKGNDTLVGGSG 127
Query: 377 QDVFESMKHFYEFGLSEGRDITF-------------DSYLYLGSYDDLRNVF-GSDRGAA 422
D+ +G D+ F + +Y G DDL G+D A
Sbjct: 128 NDIMRGGDGDDLLIGGDGNDLLFGEKGNDTLQGGPGNDTMYGGQGDDLIQGGDGNDFLAG 187
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ T G + A A ++ A+ + +
Sbjct: 188 DKGNDTLTGGAGADTFALTANPNLSRDVITDFNSAEGDVIALRAGAGY 235
>gi|163744013|ref|ZP_02151381.1| hypothetical protein RG210_01642 [Phaeobacter gallaeciensis 2.10]
gi|161382701|gb|EDQ07102.1| hypothetical protein RG210_01642 [Phaeobacter gallaeciensis 2.10]
Length = 1728
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/333 (12%), Positives = 84/333 (25%), Gaps = 11/333 (3%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
S D F + ++ G+G G+++S + + IG
Sbjct: 1326 VSDPDDANFDQGTVTISFESGMQPEDCISVDVSGVVSLSAGLGNGSVVSVSGV-TIGTVS 1384
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G+ + S + Y +V A+
Sbjct: 1385 ATGTGGAGEDLVINLTAGATHAAMQSFLSAIQYDNTSVGAPTDGNREIGVRIVGGDGAIS 1444
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ ++ ++ D D D + I+
Sbjct: 1445 DLA-VITINVDPASSGGGSSGGTPATVEIPMDVSAGDDNDTFSGTNYNDTIN-GGGGNDR 1502
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----- 307
I G + ++++ G G+D + S N+ +GND +G G D
Sbjct: 1503 ITGDRGEDLLHGGKGVDTLRGGDGDDRLFLGSGNDRGVAGAGNDQMNGGGGNDMLHGGQG 1562
Query: 308 --FYYAPSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEY 364
++Y + + + + F S +R+R
Sbjct: 1563 DDTLRGGQGADRVYGGQGSDSIRAGQGNDTVFGGSGADRVRGDLGNDRISLGIDDDRAFG 1622
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ + L G+D GRD
Sbjct: 1623 GSGDDSLAGGDGEDTLNGGMGDDLLRGGAGRDT 1655
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 51/215 (23%), Gaps = 28/215 (13%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + N T + +++ G GND + G+ ++ G D G G D F
Sbjct: 1475 DVSAGDDNDTFSGTNYNDTINGGGGNDRITGDRGEDLLHGGKGVDTLRGGDGDDRLFL-- 1532
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ D ++ +L + L
Sbjct: 1533 -----------GSGNDRGVAGAGNDQMNG---------------GGGNDMLHGGQGDDTL 1566
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D + +G D F DL N S R + G
Sbjct: 1567 RGGQGADRVYGGQGSDSIRAGQGNDTVFGGSGADRVRGDLGNDRISLGIDDDRAFGGSGD 1626
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
D L + L + G
Sbjct: 1627 DSLAGGDGEDTLNGGMGDDLLRGGAGRDTFVFASG 1661
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 4/114 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + +Y G D ++ G N + G N I+
Sbjct: 1562 GDDTLRGGQGADRVYGGQGSD----SIRAGQGNDTVFGGSGADRVRGDLGNDRISLGIDD 1617
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G SG+D + G + G+D+ G +G DTF + + +I F
Sbjct: 1618 DRAFGGSGDDSLAGGDGEDTLNGGMGDDLLRGGAGRDTFVFASGRGNDRISDFN 1671
>gi|78776444|ref|YP_392759.1| hemolysin-type calcium-binding region [Sulfurimonas denitrificans
DSM 1251]
gi|78496984|gb|ABB43524.1| Hemolysin-type calcium-binding region [Sulfurimonas denitrificans
DSM 1251]
Length = 768
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
DLT+ GG I +I E + + ++V + G+D + G + N+ F
Sbjct: 523 DLTIRGGEGKNILFTGAGHQNIMLGEDDDELYAGDGDDTVGSAGGDDRIFGEAGNDTIFG 582
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-EHKQDFLSDVERLRFADQC 350
GND+ G SG D Y Y I R E V A+ ++ D + + E ++FAD
Sbjct: 583 GEGNDMLHGGSGTDVATYSGNIAEYIITRDEGKTYVALASNPNEIDTIINTETIKFADGN 642
Query: 351 IDS 353
Sbjct: 643 YTI 645
>gi|147900438|ref|NP_001083604.1| matrix metalloproteinase-28 b [Xenopus laevis]
gi|38197301|gb|AAH61659.1| MGC68506 protein [Xenopus laevis]
Length = 497
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 63/190 (33%), Gaps = 45/190 (23%)
Query: 29 RYKPDVLTTHRLSFDITEL----NPNA-QEVARWALGEWSKVVDLTFEET-SIHSDIKFI 82
K L++ I + + ++ + A WS V LTF E +DI+
Sbjct: 111 TSKNKKWYKRHLTYQIVNWPWYLSKHQVRQAVKAAFQLWSNVSSLTFSEALRDPADIRLA 170
Query: 83 SS----NNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNALHEIGH 130
N+G E +FD A+ W GKG L HEIGH
Sbjct: 171 FYEGDHNDGAGNAFDGPGGALAHAFFPRRGEAHFDSAEHWSLD-GKGRNLFVVLAHEIGH 229
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
LGL H N Y + V+++ D++A
Sbjct: 230 TLGLQHSSFKNALMSPYYKKLN------KDYVLNFD--------------------DVLA 263
Query: 191 VQKIYGAPKG 200
+Q +YGAP
Sbjct: 264 IQNLYGAPPS 273
>gi|254669521|emb|CBA03460.1| putative calcium binding hemolysin protein [Neisseria meningitidis
alpha153]
Length = 1056
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 58/447 (12%), Positives = 118/447 (26%), Gaps = 48/447 (10%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 92 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGR 151
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--- 187
+ + + ++ + D S Y + D
Sbjct: 152 KDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 211
Query: 188 --IVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 212 VLDVATVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 267
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + +++ G GND + G N+ +GND +G SG
Sbjct: 268 IYSGNGNDTLNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 327
Query: 304 LDTFFYYAPSYLYKIYRFE-------------------------------------NAII 326
DT+ + +Y ++ +
Sbjct: 328 SDTYVFGEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVT 387
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
V ++ ++ + F + + V ++ + + T + L
Sbjct: 388 VQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGSTLNGGLGD 447
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
++G D+ Y N Y +G + L
Sbjct: 448 DYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGE 507
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNF 473
++ LI + G D +
Sbjct: 508 DGNDTLIGGAGNDYLEGGSGSDTYVFG 534
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 57/442 (12%), Positives = 118/442 (26%), Gaps = 48/442 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + T + +D + +G G G +N + G +
Sbjct: 497 GGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 556
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-----IVA 190
+ + ++ + D S Y + D VA
Sbjct: 557 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 616
Query: 191 VQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
K + +Y +Y + GDDLL+ G N +
Sbjct: 617 TVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDAGNDSIYSGN 672
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G E N + + + + G+ GND + G N+ +GND +G SG DT+
Sbjct: 673 GNDTLNGGEGNDALYGYNGNDVLNGAEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV 732
Query: 309 YYAPSYLYKIYRFE-------------------------------------NAIIVYDAN 331
+ +Y ++ + V
Sbjct: 733 FGEGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYF 792
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
++ ++ + F + + V ++ + + T + L +
Sbjct: 793 QNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYG 852
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
++G D+ Y N + Y +G + L ++
Sbjct: 853 ADGDDLLNGDAGNDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDT 912
Query: 452 LINAFADAPDLVQVGKDHFSNF 473
LI + G D +
Sbjct: 913 LIGGAGNDYLEGGSGSDTYVFG 934
Score = 51.7 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/240 (12%), Positives = 63/240 (26%), Gaps = 37/240 (15%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 97 GHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 156
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ V ++ ++ + F + + V
Sbjct: 157 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 216
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ + + T + L + ++G D+ Y N
Sbjct: 217 TVKELVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT 276
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ Y +G + L ++ LI + G D +
Sbjct: 277 LNGGEGNDALYGYNGNDALNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGEG 336
>gi|119488092|ref|ZP_01621536.1| glycerophosphoryl diester phosphodiesterase [Lyngbya sp. PCC 8106]
gi|119455381|gb|EAW36520.1| glycerophosphoryl diester phosphodiesterase [Lyngbya sp. PCC 8106]
Length = 1309
Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 58/177 (32%), Gaps = 13/177 (7%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ S +TI G+D ++ G DLN S G + N I+
Sbjct: 1134 GDDVLTGSANSETIAGLLGNDEING-GDGDDILRGDLNNR--SPGGSFGGNDIISGGLGN 1190
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G GND + G+ +++ + G+D+ G G DT E
Sbjct: 1191 DEIGGKGGNDSLFGDEGDDLIWGDDGDDILRGGLGNDTL------TGDDFSGGEGVDTFV 1244
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A D + D E + + + L T+ + G + ++
Sbjct: 1245 LAIGEGTDTIVDFEV----GMDVIGLANLTFAGLSLTSENGNTTVAFGDETLAIIEG 1297
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/195 (12%), Positives = 43/195 (22%), Gaps = 27/195 (13%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ G+DV+ G++ + GND +G G D +
Sbjct: 1132 TDGDDVLTGSANSETIAGLLGNDEINGGDGDDILRGDLNNRS-------------PGGSF 1178
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ + L G D+
Sbjct: 1179 G--------------GNDIISGGLGNDEIGGKGGNDSLFGDEGDDLIWGDDGDDILRGGL 1224
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
G D G D + + + G F L + + +
Sbjct: 1225 GNDTLTGDDFSGGEGVDTFVLAIGEGTDTIVDFEVGMDVIGLANLTFAGLSLTSENGNTT 1284
Query: 454 NAFADAPDLVQVGKD 468
AF D + G +
Sbjct: 1285 VAFGDETLAIIEGVE 1299
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 76/271 (28%), Gaps = 40/271 (14%)
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
N++ L +++ P D D + + I V + +N Y
Sbjct: 1039 NNFVEKEELVDLLNIADPDDLNGDGETTFSFPFVT--IEDVLVLDEKTILVANDNNYPFS 1096
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ + I D+ L+L G+ ++ T+ + G + TIA +
Sbjct: 1097 LGRGPDIDNNEIIQLELDEPLNLDPRLGIPVAVE-PTDGDDVLTGSANSETIAGLLGNDE 1155
Query: 271 VVGSSGNDVVIGNSANNVFFES--SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G G+D++ G NN GND+ G G D
Sbjct: 1156 INGGDGDDILRG-DLNNRSPGGSFGGNDIISGGLGNDEI--------------------- 1193
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ D L E IL + L D F +
Sbjct: 1194 -GGKGGNDSLFGDE------GDDLIWGDDGDDILRGGLGNDTLTG----DDFSGGEGVDT 1242
Query: 389 F--GLSEGRDITFDSYLYLGSYDDLRNVFGS 417
F + EG D D + + F
Sbjct: 1243 FVLAIGEGTDTIVDFEVGMDVIGLANLTFAG 1273
>gi|157278505|ref|NP_001098354.1| membrane-type matrix metalloproteinase [Oryzias latipes]
gi|46359591|dbj|BAD15298.1| membrane-type matrix metalloproteinase [Oryzias latipes]
Length = 607
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 59/205 (28%), Gaps = 55/205 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W + I Y +T + + R A W KV L FE +
Sbjct: 120 LTGQKWQHKHITYSLKNVTPKVG-------DEKTHDAIRRAFDVWQKVTPLRFEAVPYNE 172
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 173 LQRTKKDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 232
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + D +N
Sbjct: 233 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMDTDN------------------- 273
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
F + D++ +QKIYG P
Sbjct: 274 --FKLP----MDDLMGIQKIYGPPD 292
>gi|294085806|ref|YP_003552566.1| metalloprotease [Candidatus Puniceispirillum marinum IMCC1322]
gi|292665381|gb|ADE40482.1| metalloprotease, putative [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 971
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 63/190 (33%), Gaps = 25/190 (13%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEETSIHSDI 79
+ PD + AR L E+ + ++ F E +
Sbjct: 474 DANDVARSPDANGNWGYLSGYFIRTQEQIDQARRYIKAVLAEFERAANVRFVEVEHSQNN 533
Query: 80 K--------FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG-TILSHNALHEIGH 130
+ F+ ++ + P + V + K T +HEIGH
Sbjct: 534 RGDVPIIYLFLPTDYVH--IPGTPGAWAGYPGASARFVQHFDPSKPYTHYRGEPVHEIGH 591
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+GL HP N G E +S +++MSY + + +DI
Sbjct: 592 MMGLRHPFDSN-GQRQTSWPARPELESDFSTIMSYSPKTNWVGLT---------PADIAV 641
Query: 191 VQKIYGAPKG 200
+Q +YGAP+G
Sbjct: 642 LQFLYGAPQG 651
>gi|118589155|ref|ZP_01546562.1| fat protein-possibly involved in cell-cell attachment [Stappia
aggregata IAM 12614]
gi|118438484|gb|EAV45118.1| fat protein-possibly involved in cell-cell attachment [Stappia
aggregata IAM 12614]
Length = 2332
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 70/491 (14%), Positives = 140/491 (28%), Gaps = 45/491 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + +NG +D + G G T+ + G
Sbjct: 1789 GTGDDAITAHSNGGS--IDGGEGNDTLTGSSVSDKLQGGAGNDTLTGGAGADLLQGGTG- 1845
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
++ G N +V +S + T + +D +
Sbjct: 1846 --DDTFQVGGDGTWSGYYARNTVTGDTVSLSGRTINSDVFEGGDGTDTLLGTDDADAIFL 1903
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYD---SGGDDLLDLTLIGGVKNYIDLNTESWS 251
++ Y + P + +I + G+D+LD+T S
Sbjct: 1904 ---------DDTYSDMHAEASGPRLVSIENVNLGAGNDILDMT----------------S 1938
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
Y +MT+ + + +GND ++G N+ F +GND DG +G DT Y
Sbjct: 1939 DTHTYTTDMTVDGGVGNDVIWTGAGNDTILGGEGNDTLFGGAGNDRLDGGAGTDTAIYSG 1998
Query: 312 PSYLYKIYRFENA----IIVYDANEHKQDFLSDVERLRFADQ---CIDSVNVKQRSILEY 364
Y I + ++ + D +S+VE RFAD + ++ + +
Sbjct: 1999 NWEDYDIVQNDDGSYTITDLRTDAPDGVDTVSNVETYRFADGELQSDELIDRPVGDVSDT 2058
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV-----FGSDR 419
++ + ++ G + F E + T + D + V F S
Sbjct: 2059 NSAGNTIHELDGAGTQVGITAFAEDPNGDAVTYTLSDDRFEIDADGVVTVADHAFFDSQI 2118
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ +T +G A+ ++ K + + +
Sbjct: 2119 ENSIDLTVTATSADGSQSSQSFAISVTGEYDGEFTGGDGGGTFTGTDKSYSVDGVGGDDT 2178
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
T D + + N G + G + + ++ L
Sbjct: 2179 ITTGDFDDRIDGGANGGNDTLDGGGGNDLIFGRGGADDIYGGAGNDTIIGGTGNDTLNGG 2238
Query: 540 FADAPDLVQAG 550
+ G
Sbjct: 2239 DGSDLFMYGLG 2249
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/569 (12%), Positives = 148/569 (26%), Gaps = 30/569 (5%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+T + + + + D++ T + V+ S V D
Sbjct: 1286 FTVDENGVIRVAEGASFDAETEGSIDIVVTATSTDGSVSEETFTIAVSDVNETAVSAVSD 1345
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL-SHNALH 126
+ D S+ V D+ + G T+ +
Sbjct: 1346 VDASANGFAEDAAEGSTVGITVQATDDDATDTVAYTVSDGRFTVGADGVITVAAGAAFDY 1405
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E + L S + G +D + ++ + + +
Sbjct: 1406 ESEPTIDLTVTASSSDGSTSQETFTLSVSDIAESYQLAEGQTTFTDTGVAETSITGNDSA 1465
Query: 187 DIVAVQKIYGAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
D + + G++ +Y GDD +D
Sbjct: 1466 DTITAHEDGSTIYSGAGDDTIYGGAGNDTILFGEGADVVYGGAGDDFIDDERGTQPNTGD 1525
Query: 244 DLNTESW--SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE---------- 291
+ ++ G N T+ + +++ G + +D + G++ N+ +
Sbjct: 1526 NYLDGGDGNDTMYGGSGNDTLIGGSGNDTLHGENDDDTLQGDAGNDKLYGEAGNDTLDGG 1585
Query: 292 --------SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY----DANEHKQDFLS 339
SG+D DG +G DT Y Y I + D +
Sbjct: 1586 DGDDILKGGSGDDSIDGGTGTDTVIYSGNRSDYDITENADGSYTVVDTRTGASEGTDTVI 1645
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+VE RFAD + + ++ + I + + + S F E T
Sbjct: 1646 NVETFRFADGDVLAGDLVAKDISAVSDTDAASNTIFENAEEGSTVGIKAFADDENTSDTV 1705
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
+ + + A+ Y + + L + A
Sbjct: 1706 SYTVDDARFTVDADGTVRVAAGASFDYESEPQISLTVTATSTDGSSSSESFTLSVSDAAE 1765
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
+ G F++ G E + + ++ + ++ G + +G
Sbjct: 1766 NLQLADGGVTFTDTGVAETTIMGGTGDDAITAHSNGGSIDGGEGNDTLTGSSVSDKLQG- 1824
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQ 548
L A + L D V
Sbjct: 1825 -GAGNDTLTGGAGADLLQGGTGDDTFQVG 1852
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/307 (12%), Positives = 69/307 (22%), Gaps = 24/307 (7%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+ ++ + GT H G
Sbjct: 646 GNDTISGNDAADRLAGGEGDDTIEGGAGNDTIFGENAPVSGTWHYQVYDHNFSGEAGQA- 704
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+ + + T V ++ D + +D +
Sbjct: 705 ---GDISSGTLIDEGTTDAFDLDTVVQQARGSSENPEDFGVILTSNFTATDGGTYRF--- 758
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT---LIGGVKNYIDLNTESWSSI 253
+ + T + D LD +DL +I
Sbjct: 759 --STRSDDGSTIEIFDAYGNRLTFTNQNGSQTDYLDNDYHQSATTRWADVDLEPGEIYTI 816
Query: 254 ---------GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ E + S ++ +G+D DG G
Sbjct: 817 VVKVWENQGKEVLEATVTPPGGAAEDLFTSDFVSTAAVVPGDDTLTGGAGDDTIDGGLGT 876
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYD---ANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
DT Y Y I E V D + D + +VE RFAD + ++ + I
Sbjct: 877 DTAVYSGNFTDYTITESEGVFTVTDNRPGSPDGTDTVVNVENFRFADGDYLAGDLIAQDI 936
Query: 362 LEYTASY 368
T
Sbjct: 937 TAVTDGN 943
>gi|84501008|ref|ZP_00999243.1| type I secretion target repeat protein [Oceanicola batsensis
HTCC2597]
gi|84391075|gb|EAQ03493.1| type I secretion target repeat protein [Oceanicola batsensis
HTCC2597]
Length = 1210
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 55/168 (32%), Gaps = 10/168 (5%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
T + + G + TI +++ G G+D++ G+ ++ GND GS G D
Sbjct: 1001 GTGNVDDLSGTPGDDTIGGFGRDDTLHGGDGDDLINGHGGDDSLVGGRGNDDMRGSPGND 1060
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T + + + ++ + +H D L + + L
Sbjct: 1061 TLRGWGGDDTLRGFNDDDLLT----GQHGDDVLVG------NRGNDLLLGNEGNDSLNGG 1110
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
++ LI G D FG EG D+ D+
Sbjct: 1111 IGHDTLIGGEGADTVTGWAWGDVFGFDEGDIAPGDTITDFTPGQDVIQ 1158
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/159 (13%), Positives = 40/159 (25%), Gaps = 10/159 (6%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I ++ + G+ G+D + G ++ G+D+ +G G D+ +
Sbjct: 999 INGTGNVDDLSGTPGDDTIGGFGRDDTLHGGDGDDLINGHGGDDSLV--GGRGNDDMRGS 1056
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D L +L + L+ G D
Sbjct: 1057 PGNDTLRGWG--GDDTLRGFND------DDLLTGQHGDDVLVGNRGNDLLLGNEGNDSLN 1108
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
EG D D ++ D
Sbjct: 1109 GGIGHDTLIGGEGADTVTGWAWGDVFGFDEGDIAPGDTI 1147
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/243 (13%), Positives = 66/243 (27%), Gaps = 29/243 (11%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G+++ + +P I + G D +D +I G
Sbjct: 36 SGDDLLTEPDRHGATPGDDAIGGTSGADEIDALS-------------GDDTIAGLRGADR 82
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ +++ G SG+D++ G + F G+D DG SG D F A + +
Sbjct: 83 VDGGAGRDALDGGSGDDLLSGGGEADRLFGGVGDDTMDGGSGDDLFDDIAGADSF----- 137
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D + +E + + + + G D F
Sbjct: 138 --------SGGTGHDVIFAIEPEQ--GAPDEIEGGSGDDRFWGDDG-DTMTGGDGADRFM 186
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
RD+ F + G D + + + G
Sbjct: 187 VATGRPGAEPVVIRDLDFSRPEHGGQPDQVIFTDAEGAIYPRSAFYDGTLNAGIGDLPDG 246
Query: 442 ALE 444
+
Sbjct: 247 SGA 249
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 7/146 (4%)
Query: 199 KGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G+ G++ + I GGDD +L+GG N + ++ G
Sbjct: 1009 SGTPGDDTIGGFGRDDTLHGGDGDDLINGHGGDD----SLVGGRGNDDMRGSPGNDTLRG 1064
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + T+ + + G G+DV++GN N++ + GND +G G DT +
Sbjct: 1065 WGGDDTLRGFNDDDLLTGQHGDDVLVGNRGNDLLLGNEGNDSLNGGIGHDTLIGGEGADT 1124
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDV 341
+ + + + + D ++D
Sbjct: 1125 VTGWAWGDVFGFDEGDIAPGDTITDF 1150
Score = 41.7 bits (96), Expect = 0.45, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 38/100 (38%), Gaps = 5/100 (5%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES-----SGNDVFDGSSGLD 305
+ G ++ + + +++ G+ G D + G +++ +G DV G +G D
Sbjct: 291 DARNGTAEDDHLVGGSGDDTLGGNGGEDWLNGRDGDDLIDGRDPAGTAGGDVLLGGAGWD 350
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
T ++ ++ +VY + + E L
Sbjct: 351 TIRADDGDFVAGFEGRDSYELVYGRADAAAITIFGYEVLS 390
>gi|114766697|ref|ZP_01445636.1| hypothetical protein 1100011001297_R2601_11699 [Pelagibaca
bermudensis HTCC2601]
gi|114541087|gb|EAU44142.1| hypothetical protein R2601_11699 [Roseovarius sp. HTCC2601]
Length = 868
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 64/456 (14%), Positives = 122/456 (26%), Gaps = 36/456 (7%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
S G D S SY + +S+ + Y P + V
Sbjct: 30 DFSALPGSFTISFARDGAFLSISDGAESYVIGDNSVGAGADAYLGAPGDFGLFEVITGSA 89
Query: 197 APKGSLGNN---------------IYKIEVQQKDSPFIQTIYDSGGDDLL---------- 231
GN+ Y + T+ GG+D +
Sbjct: 90 GRDVIDGNDESELIDGGAGDDSILGYGGDDALTGGLGADTLRGGGGNDTVSGNDGDDVIY 149
Query: 232 ----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D +L+GG + G + + + ++++G G+D + G+ ++
Sbjct: 150 GNEGDDSLLGGDGADSIYGEYGDDYVEGGAGDDHLEGNEGKDTLIGGDGDDWMRGSYDDD 209
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ +G+D G G DTF + + + ++D RL
Sbjct: 210 ALWGGAGDDYLWGGYGDDTFHIENGFGNDTVDAEDVDET--TGDVLDLTAVTDGLRLDLT 267
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGRDITFDSYLYL 405
+S ++ S + E ++ G+D ++ D
Sbjct: 268 SADPESGSLTDGSSTLVFSQVESILLGAGEDTIALADFGGLDSVTGFAAPELQPDGSYLA 327
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
D+ ++ D +T G L+ ADA
Sbjct: 328 RDVLDVSDLTDFDGSPVDTDDVTVTDTVGDGSGDAVLSFPGGEAITLLGVTADAVKSAAQ 387
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
+ +E V + DD + +D G ++ + + F+
Sbjct: 388 LEALGIPAATDEAPVVVPPEKPSPDAPDDGDDGTEADGGGSSPPPDAVDLPQIDGAFEFE 447
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
A +DL G H FG
Sbjct: 448 AT---LRVDDLAGGHGQTVFEYGGGGPHAITFGQIG 480
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 71/228 (31%), Gaps = 20/228 (8%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IESV 271
D F + + ++LD + + G ++ SI ++ I ++V ++
Sbjct: 13 DPDFWAMVTTAPEPNMLDFSALPGSFTISFARDGAFLSISDGAESYVIGDNSVGAGADAY 72
Query: 272 VGSSGN----DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+G+ G+ +V+ G++ +V + +++ DG +G D+ Y
Sbjct: 73 LGAPGDFGLFEVITGSAGRDVIDGNDESELIDGGAGDDSILGYGGDDAL----TGGLGAD 128
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D +S D + L + + G D E
Sbjct: 129 TLRGGGGNDTVSG------NDGDDVIYGNEGDDSLLGGDGADSIYGEYGDDYVEGGAGDD 182
Query: 388 EFGLSEGRDITF---DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+EG+D GSYDD G+ Y
Sbjct: 183 HLEGNEGKDTLIGGDGDDWMRGSYDDDALWGGAGDDYLWGGYGDDTFH 230
>gi|87198748|ref|YP_496005.1| glycosyl transferase family protein [Novosphingobium
aromaticivorans DSM 12444]
gi|87134429|gb|ABD25171.1| glycosyl transferase, family 2 [Novosphingobium aromaticivorans DSM
12444]
Length = 680
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 38/114 (33%), Gaps = 14/114 (12%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
D F A Y+A + D+ + L H+ G GR+ + F+ YL + D+
Sbjct: 15 DLFDADWYLAEYPDVQS-------LQMPPAVHYLWLGARLGRNPSPRFSTRSYLDANPDV 67
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRALGI-SGMQFKSVMNLSEKSRDKADLSLSF 632
H++ G EGR+ I + S S F
Sbjct: 68 AQA----GINPLLHFLLAGRDEGRSGTILAAPSRGSTETDVNASTFGEHRPYVF 117
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ YL Y D+++ + A HY+ G + GRNP F Y+ ++ D+ A
Sbjct: 17 FDADWYLAEYPDVQS----LQMPPAVHYLWLGARLGRNPSPRFSTRSYLDANPDVAQA-G 71
Query: 542 DAPDLVQAGKDHFSNFGYEEGRS 564
P L HF G +EGRS
Sbjct: 72 INPLL------HFLLAGRDEGRS 88
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 12/86 (13%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD+ YL Y D++++ + A HY+ G + GRNP F Y+ ++ D+ A
Sbjct: 16 LFDADWYLAEYPDVQSL----QMPPAVHYLWLGARLGRNPSPRFSTRSYLDANPDVAQAG 71
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ HF G +EGR T
Sbjct: 72 INPLL-------HFLLAGRDEGRSGT 90
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 13/110 (11%)
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYL 489
D F A Y+A + D+ + H+ G GR + F + YL
Sbjct: 9 ASLEASDLFDADWYLAEYPDVQSLQMPPAV-------HYLWLGARLGRNPSPRFSTRSYL 61
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
+ D+ + H++ G EGR+ A ++ D+ +
Sbjct: 62 DANPDVAQAGIN----PLLHFLLAGRDEGRSGTILAAPSRGSTETDVNAS 107
Score = 44.0 bits (102), Expect = 0.075, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 10/101 (9%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
Y A Y D+ + H+ G GR+ + F + YL + D+
Sbjct: 16 LFDADWYLAEYPDVQSL----QMPPAVHYLWLGARLGRNPSPRFSTRSYLDANPDVAQA- 70
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
H++ G EGR+ A ++ D+ +
Sbjct: 71 ---GINPLLHFLLAGRDEGRSGTILAAPSRGSTETDVNAST 108
>gi|254510354|ref|ZP_05122421.1| vcbs repeat domain protein [Rhodobacteraceae bacterium KLH11]
gi|221534065|gb|EEE37053.1| vcbs repeat domain protein [Rhodobacteraceae bacterium KLH11]
Length = 2270
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 72/246 (29%), Gaps = 40/246 (16%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + + +Y GDDL++ E + G + N
Sbjct: 472 ATFDDPTVSDDDNLFGGTGDDIVYGGRGDDLIE-------------GNEDNDLLFGEDGN 518
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ I+ + G +G+D + G + +GND +G +G D F + I
Sbjct: 519 DTLRGGHGIDRLEGGAGSDELSGGDGADELTGGTGNDTLNGGAGEDIFAFKTGDGQDVIS 578
Query: 320 RFE---------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVN--------------V 356
F+ ++ + + + D++
Sbjct: 579 DFDPANDTIHINGDVLDPTVPTSGITLIEQGDNVLITYGSNDTILVENLSIEEWAGFLPN 638
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
L T+ + + G D + + S G D+ +DDL G
Sbjct: 639 AGDDTLTGTSERDKIYGGAGNDTIQGLGGNDLIYGSFGDDLI----DGGEGHDDLYGGAG 694
Query: 417 SDRGAA 422
+DR
Sbjct: 695 NDRILG 700
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 41/168 (24%), Gaps = 27/168 (16%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY------------- 314
E+V+GS+ +D ++G+ +N G D DG G D
Sbjct: 22 FENVIGSNFDDNIVGDDQDNTIEGGEGIDQIDGLGGADILRGMEGDDVIDGGAPVGQGSD 81
Query: 315 --LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+I + + S + + L
Sbjct: 82 EEADRIEGGSGNDTISIHAGEAYGQAGNDSISTLDTGATGSNGDSPTVQAYGGSGNDMLD 141
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ +HF G D LY + G+D
Sbjct: 142 A-----RGSTGEHFLSGGSG-------DDVLYGNGSSTISAGSGADTV 177
>gi|78189851|ref|YP_380189.1| hypothetical protein Cag_1896 [Chlorobium chlorochromatii CaD3]
gi|78172050|gb|ABB29146.1| hypothetical protein Cag_1896 [Chlorobium chlorochromatii CaD3]
Length = 574
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+D L+ G ++ + + +I + N + + + G +GND + + N+
Sbjct: 444 VDGLLLSGSRDLLVQSKGKSVTIVAGDGNQELRSEGGNDLLFGGNGNDRLFAGAGNDELC 503
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIY--RFENAIIVYDA--NEHKQDFLSDVERLRF 346
+G+++ DG +G D F+ Y++ N V D+ N + L ++E+LRF
Sbjct: 504 GGNGDNLLDGGAGSDVAFFSGNVAEYRMTHNAATNMTSVVDSIPNRDGSNQLINIEQLRF 563
Query: 347 ADQC 350
AD+
Sbjct: 564 ADRT 567
Score = 42.1 bits (97), Expect = 0.33, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 71/282 (25%), Gaps = 27/282 (9%)
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY--DANEHKQDFLSDVERLRFADQCIDSV 354
+ G G DT + S Y + E +V + +++ RL FAD
Sbjct: 263 IVQGGGGEDTLYLLGSSVQYLLAVDEGGTLVIAESQGLDQNALATNIARLEFADGSFFLA 322
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
A G + L G IT + LR++
Sbjct: 323 PQTVAGKAITLA-----TGSEGSKQLRAQ-------LPAGMGITVRPLSSSAMQEQLRSL 370
Query: 415 FGSDRGAAARHYITHGVKEGRNPD------AFKALEYIASHEDLINAFADAPDLVQVGKD 468
G ++ P F L + D+ + + +
Sbjct: 371 VGKSVQPTIEQRLSALFVNQLEPQLVLRGLDFATLPMLRHAADVELNGSTKGKQWVMVES 430
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
+ G D L GS D L G A G +E R+ L
Sbjct: 431 NALPDGAHVT-VKDVDGLLLSGSRDLLVQSKGKSVTIVA----GDGNQELRSEGGNDLLF 485
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
++ L + G + G F+ +
Sbjct: 486 GGNGNDRLFAGAGNDELCGGNGDN--LLDGGAGSDVAFFSGN 525
>gi|332705379|ref|ZP_08425457.1| glycerophosphoryl diester phosphodiesterase [Lyngbya majuscula 3L]
gi|332355739|gb|EGJ35201.1| glycerophosphoryl diester phosphodiesterase [Lyngbya majuscula 3L]
Length = 974
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 7/131 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGG--VKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ T+ G+DL+ ++ D I G N I +
Sbjct: 802 GNDFITAAEGNDTVDGGLGNDLIQGEAGDDVLQGDFADSTIGGDDVIFGGLGNDRINGNL 861
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS-----GLDTFFYYAPSYLYKIYRF 321
+ + G +G+D + GN +++ GND G G DTF A I F
Sbjct: 862 GNDKLYGGAGDDFIFGNEGDDLIRGGLGNDFLTGDDSSGISGSDTFVLAAGEGTDFILDF 921
Query: 322 ENAIIVYDANE 332
+ + + +
Sbjct: 922 QAGVDLIGLAD 932
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/205 (10%), Positives = 38/205 (18%), Gaps = 13/205 (6%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++ ++G + + G ++ GND + G DT
Sbjct: 776 VDPLLGLPAPNFISGTPDSDEIVGELGNDFITAAEGNDTV-------------DGGLGND 822
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
E D L + + L G D +
Sbjct: 823 LIQGEAGDDVLQGDFADSTIGGDDVIFGGLGNDRINGNLGNDKLYGGAGDDFIFGNEGDD 882
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G D S D + + + G I
Sbjct: 883 LIRGGLGNDFLTGDDSSGISGSDTFVLAAGEGTDFILDFQAGVDLIGLADGLTFGQLSIE 942
Query: 448 SHEDLINAFADAPDLVQVGKDHFSN 472
+ L +
Sbjct: 943 QDSQNARISLENQLLATFAIANPLT 967
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 36/152 (23%), Gaps = 20/152 (13%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I+ + +VG GND + N+ GND+ G +G D
Sbjct: 788 ISGTPDSDEIVGELGNDFITAAEGNDTVDGGLGNDLIQGEAGDDVLQGDFADS------T 841
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
V +R+ + + + +G D
Sbjct: 842 IGGDDVIFGG-------LGNDRINGNLGNDKLYGGAGDDFIFGNEGDDLIRGGLGNDFLT 894
Query: 382 S-------MKHFYEFGLSEGRDITFDSYLYLG 406
+ EG D D +
Sbjct: 895 GDDSSGISGSDTFVLAAGEGTDFILDFQAGVD 926
>gi|218531769|ref|YP_002422585.1| hypothetical protein Mchl_3845 [Methylobacterium chloromethanicum
CM4]
gi|218524072|gb|ACK84657.1| hypothetical protein Mchl_3845 [Methylobacterium chloromethanicum
CM4]
Length = 355
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 16/112 (14%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F Y+ + + N H+ G+ +G + F+ YL + D+
Sbjct: 21 GFDEAYYLEHNPSVRNFTGSP-------LQHYLQHGWRDGCDPSAGFSSSGYLAANPDVT 73
Query: 581 NVFGSDRSAAAQHYITHGMKEGRAL---GISGMQFKSVMNLSEKSRDKADLS 629
+ H++ HG+ EGR G S + S+ + D S
Sbjct: 74 A----NDLNPLAHFLKHGLAEGRGGWQKGSSPDRSLSIDQRASAEWFSDDNS 121
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 12/84 (14%)
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 539
FD YL +RN G + +HY+ HG ++G +P F + Y+A++ D+
Sbjct: 20 PGFDEAYYLEHNPSVRNFTG----SPLQHYLQHGWRDGCDPSAGFSSSGYLAANPDVTAN 75
Query: 540 FADAPDLVQAGKDHFSNFGYEEGR 563
+ HF G EGR
Sbjct: 76 DLNP-------LAHFLKHGLAEGR 92
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 455
FD YL +RN G + +HY+ HG ++G +P F + Y+A++ D+
Sbjct: 20 PGFDEAYYLEHNPSVRNFTG----SPLQHYLQHGWRDGCDPSAGFSSSGYLAANPDVTAN 75
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
+ HF G EGR
Sbjct: 76 DLNP-------LAHFLKHGLAEGR 92
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 13/84 (15%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDL 495
F Y+ + + N H+ G +G F S YL + D+
Sbjct: 20 PGFDEAYYLEHNPSVRNFTGSP-------LQHYLQHGWRDGCDPSAGFSSSGYLAANPDV 72
Query: 496 RNVFGSDRGAAARHYITHGVKEGR 519
+ H++ HG+ EGR
Sbjct: 73 TA----NDLNPLAHFLKHGLAEGR 92
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 10/82 (12%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
Y + G ++H+ + G +G D + F S YL + D+
Sbjct: 21 GFDEAYYLEHNPSVRNFTG----SPLQHYLQHGWRDGCDPSAGFSSSGYLAANPDVTA-- 74
Query: 416 GSDRGAAARHYITHGVKEGRNP 437
+ H++ HG+ EGR
Sbjct: 75 --NDLNPLAHFLKHGLAEGRGG 94
Score = 45.5 bits (106), Expect = 0.025, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 21/63 (33%), Gaps = 6/63 (9%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
F+ YL + N GS QHY+ HG ++G S S +
Sbjct: 20 PGFDEAYYLEHNPSVRNFTGS----PLQHYLQHGWRDG--CDPSAGFSSSGYLAANPDVT 73
Query: 625 KAD 627
D
Sbjct: 74 AND 76
>gi|307152895|ref|YP_003888279.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
gi|306983123|gb|ADN15004.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
Length = 1366
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 59/496 (11%), Positives = 115/496 (23%), Gaps = 27/496 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ ++ G + AD G+G +++ + L
Sbjct: 737 GGTGTNYLDGGTGNDSLNASAGAGDTVLGGAGADSILGGVGADSLIGGLSATGATQTDDL 796
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
GG + ++ S F + + D ++
Sbjct: 797 ADTIDGAGGADAIYGNLGDDSLFGNAGNDSIFGNEGNDNLTGGT--------DNDSIDGG 848
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + + +I G D L L D + +I
Sbjct: 849 VGNDTINTNDAAAAGNELVFGGAGADSILGGSGADTLIGGLSAAGA---DQTGDIADTID 905
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N TI + +S+ G +GND + GN N+ + +D +G +G DT P+
Sbjct: 906 GGAGNDTIYGNLGDDSIFGGAGNDSIFGNEGNDNLTGGTDSDTINGGAGNDTINPNDPAA 965
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDV-----------ERLRFADQCIDSVNVKQRSILE 363
+ A D L + + A +
Sbjct: 966 GVNQLVYGGAGADSITGGSGADSLFGGLETADQAGDTADTIDGAGGDDTIYGNLGDDSIL 1025
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ + G D G D + G + G+D
Sbjct: 1026 GGDGNDSIFGNEGNDNLTGGAGSDTIDGGAGNDTINPNDPAAGVNQLVFGGAGADSITGG 1085
Query: 424 RHY-----ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ D ++ ++ + D G D +
Sbjct: 1086 SGADSLIGGLSPTGADQTGDTADTIDGAGGNDTIYGNLGDDSLFGNAGDDSIFGGAGGDN 1145
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
+ G + A G+ ++ + ++
Sbjct: 1146 ITGGDGADTLFGGFSASAAAADQTGDLADTIDGGAGIDIIFGNLGNDSIIGGDGDDSIVG 1205
Query: 539 AFADAPDLVQAGKDHF 554
AG D F
Sbjct: 1206 LQGQDTLTGSAGADGF 1221
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/372 (14%), Positives = 96/372 (25%), Gaps = 17/372 (4%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + I N+ + + AD G G T++ +
Sbjct: 840 TDNDSIDGGVGNDTINTNDAAAAGNELVFGGAGADSILGGSGADTLIGGLSAAGADQTGD 899
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ G + ++ S F + + T +
Sbjct: 900 IADTIDGGAGNDTIYGNLGDDSIFGGAGNDSIFGNEGNDNLTGGTDSDT--------ING 951
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G + + + +I G D L L + ++ +I
Sbjct: 952 GAGNDTINPNDPAAGVNQLVYGGAGADSITGGSGADSLFGGLETADQA-----GDTADTI 1006
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + TI + +S++G GND + GN N+ +G+D DG +G DT P+
Sbjct: 1007 DGAGGDDTIYGNLGDDSILGGDGNDSIFGNEGNDNLTGGAGSDTIDGGAGNDTINPNDPA 1066
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV----NVKQRSILEYTASYE 369
F A D L ADQ D+ + +
Sbjct: 1067 AGVNQLVFGGAGADSITGGSGADSLIGGLSPTGADQTGDTADTIDGAGGNDTIYGNLGDD 1126
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G D +G D F + + D A I
Sbjct: 1127 SLFGNAGDDSIFGGAGGDNITGGDGADTLFGGFSASAAAADQTGDLADTIDGGAGIDIIF 1186
Query: 430 GVKEGRNPDAFK 441
G +
Sbjct: 1187 GNLGNDSIIGGD 1198
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 68/498 (13%), Positives = 122/498 (24%), Gaps = 25/498 (5%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+I ++ + T + +D G TI I
Sbjct: 438 TIFGGLQSGDQSGDTADTISGGAGNDQIFGNLGSDSILGDAGNDTIFGGREADVIDGGAD 497
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-----MMDASFGYCATPMVSDI 188
G + G D + L + D+ D FG + +
Sbjct: 498 NDSIVGGEGTDTLLGGDGNDTLVGGLQTTDQTGDTADTINGGAGNDVIFGNLGSDTLVGD 557
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
V I G + N + T+ G+D + G D +
Sbjct: 558 VGNDTILGGREADTINGGDG-DDSLVGGEASDTLLGGDGNDTI-----FGGLQTTDQTGD 611
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+I G N ++ + +S+ G +GND + GN + +GN+ DG +G D
Sbjct: 612 LADTIDGGAGNDSLFGNAGNDSLFGGAGNDSLFGNDGVDTLVGDAGNNYLDGGTGNDILN 671
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A + + I+ A LS + D +
Sbjct: 672 ASAGAGDTVLGGAGADSILGGAGADSLIGGLSATGATQTDDLADTIDGGAGADTIYGNLG 731
Query: 368 YEDLIQVIGQDVFESMKHFYEFG----------LSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ L G + + G D L +
Sbjct: 732 DDSLFGGTGTNYLDGGTGNDSLNASAGAGDTVLGGAGADSILGGVGADSLIGGLSATGAT 791
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
A G + + + + D I +L + + G
Sbjct: 792 QTDDLADTIDGAGGADAIYGNLGDDSLFGNAGNDSIFGNEGNDNLTGGTDNDSIDGGVGN 851
Query: 478 GRFVTFDSYLY---LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
T D+ L + GA + D ++ A ++
Sbjct: 852 DTINTNDAAAAGNELVFGGAGADSILGGSGADTLIGGLSAAGADQTGDIADTIDGGAGND 911
Query: 535 DLINAFADAPDLVQAGKD 552
+ D AG D
Sbjct: 912 TIYGNLGDDSIFGGAGND 929
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/410 (10%), Positives = 85/410 (20%), Gaps = 29/410 (7%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T + D G G +I + + G +
Sbjct: 901 ADTIDGGAGNDTIYGNLGDDSIFGGAGNDSIFGNEGNDNLTGGTDSDTINGGAGNDTINP 960
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDAS--FGYCATPMVSDIVAVQKIYGAPKGSLGN-- 204
D + + S G D G GN
Sbjct: 961 NDPAAGVNQLVYGGAGADSITGGSGADSLFGGLETADQAGDTADTIDGAGGDDTIYGNLG 1020
Query: 205 -------------NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ TI G+D ++ N +
Sbjct: 1021 DDSILGGDGNDSIFGNEGNDNLTGGAGSDTIDGGAGNDTINPNDPAAGVNQLVFGGAGAD 1080
Query: 252 SIGGYEKNMTIAQH----------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
SI G ++ +++ G+ GND + GN ++ F ++G+D G
Sbjct: 1081 SITGGSGADSLIGGLSPTGADQTGDTADTIDGAGGNDTIYGNLGDDSLFGNAGDDSIFGG 1140
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANE--HKQDFLSDVERLRFADQCIDSVNVKQR 359
+G D + +A + D + ++ + +
Sbjct: 1141 AGGDNITGGDGADTLFGGFSASAAAADQTGDLADTIDGGAGIDIIFGNLGNDSIIGGDGD 1200
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+ + L G D F T + D + ++
Sbjct: 1201 DSIVGLQGQDTLTGSAGADGFYYQGAAASAVSGADNVDTITDFKAGNEADKIVLSTTAND 1260
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ A + + L
Sbjct: 1261 VFNTVTFAAGTTATLVTGTTVTANSFADLYTQLAATTLGNAATGIAASAT 1310
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 48/353 (13%), Positives = 93/353 (26%), Gaps = 12/353 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
TI G+D + + G I G N TI
Sbjct: 169 GGNDSLVGGEAGDTISGDEGNDTILGGLQTSDQTGDTADSLNGGGGNDVIYGNLGNDTIL 228
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++ G ND + G S + G D G G DT + +
Sbjct: 229 GDIGSDTIFGGRDNDFIDGGSDADSLVGGEGTDTITGGEGNDTI-LGGLQTSDQTGDTAD 287
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
++ D N+ L + + + K +L + + ++ G D
Sbjct: 288 SLTGLDGNDVIFGNLGN-DTITGDAGSDTIFGGKDNDVLSGGSENDSVVGGEGSDTINGG 346
Query: 384 KHFYEFGLS---EGRDITFDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRNPDA 439
+ + G+ DD+ G+D + + G
Sbjct: 347 TENDTLVGGVQSGDQSGDTADTISGGTGDDVIFGNLGADSLVGGDNATSTGTGADTLLGG 406
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
I D + D + G + + FG + + D+ + +F
Sbjct: 407 RDNDIIIGGDGDDSLVGGEGTDTITGGDGNDTIFGGLQSGDQSGDTADTISGGAGNDQIF 466
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G+ + G ++ A ++ ++ L G D
Sbjct: 467 GNLGSDSI--LGDAGNDTIFGGREADVIDGGADNDSIVGGEGTDTLLGGDGND 517
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 40/453 (8%), Positives = 89/453 (19%), Gaps = 29/453 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
N + + D D G + + + G
Sbjct: 617 DGGAGNDSLFGNAGNDSLFGGAGNDSLFGNDGVDTLVGDAGNNYLDGGTGNDILNASAGA 676
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G ++ S D G A + ++ +
Sbjct: 677 GDTVLGGAGADSILGGAGADSLIGGLSATGATQTDDLADTIDGGAGADTIYGNLGD-DSL 735
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL---------------DLTLIGGV 239
+G + + + + T+ G D +
Sbjct: 736 FGGTGTNYLDGGTGNDSLNASAGAGDTVLGGAGADSILGGVGADSLIGGLSATGATQTDD 795
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF- 298
+I G + ++ + +S+ G+ GND + G + N+ GND
Sbjct: 796 LADTIDGAGGADAIYGNLGDDSLFGNAGNDSIFGNEGNDNLTGGTDNDSIDGGVGNDTIN 855
Query: 299 ------------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
G +G D+ + + D + + +
Sbjct: 856 TNDAAAAGNELVFGGAGADSILGGSGADTLIGGLSAAGADQTGDIADTIDGGAGNDTIYG 915
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ ++L D ++
Sbjct: 916 NLGDDSIFGGAGNDSIFGNEGNDNLTGGTDSDTINGGAGNDTINPNDPAAGVNQLVYGGA 975
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
D + G+D D + I + + + G
Sbjct: 976 GADSITGGSGADSLFGGLETADQAGDTADTIDGAGGDDTIYGNLGDDSILGGDGNDSIFG 1035
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
+ N G +
Sbjct: 1036 NEGNDNLTGGAGSDTIDGGAGNDTINPNDPAAG 1068
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 41/319 (12%), Positives = 82/319 (25%), Gaps = 14/319 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW---SS 252
G L + I+ + TI GG T+ + + +
Sbjct: 15 GTSDADLLSFGVGIDGTINGNGGNDTIQALGGAVTGVQTIFANQGDDLVSTAGGFPTTIE 74
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE---------SSGNDVFDGSSG 303
G + N T+ +++ GS G D ++G+ ++ F G D DG +G
Sbjct: 75 AYGGQGNDTLIGGNFSDTIYGSEGTDTIVGSGGDDFLFGGLQSGVSQSGDGADSIDGGTG 134
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D F + V+ + + + D+++ + +
Sbjct: 135 NDQIF--GNLGADTLLGGTGNDSVFGGQDADTISGAGGNDSLVGGEAGDTISGDEGNDTI 192
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
D + G D + N F A
Sbjct: 193 LGGLQTSDQTGDTADSLNGGGGNDVIYGNLGNDTILGDIGSDTIFGGRDNDFIDGGSDAD 252
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
G + + D AD+ + F N G +
Sbjct: 253 SLVGGEGTDTITGGEGNDTILGGLQTSDQTGDTADSLTGLDGNDVIFGNLGNDTITGDAG 312
Query: 484 DSYLYLGSYDDLRNVFGSD 502
++ G +D+ + +
Sbjct: 313 SDTIFGGKDNDVLSGGSEN 331
>gi|332708421|ref|ZP_08428398.1| hemolysin-type calcium-binding region protein [Lyngbya majuscula
3L]
gi|332352824|gb|EGJ32387.1| hemolysin-type calcium-binding region protein [Lyngbya majuscula
3L]
Length = 371
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 36/117 (30%), Gaps = 4/117 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
TI GG+D L G + + G TI +
Sbjct: 185 NDHISGGKGNDTIVGRGGNDTL----SGDGGKDVIKGGAGKDVLDGGTGRDTINGGRGND 240
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++ G G D ++G N+ G+D +G G DT A + + +
Sbjct: 241 TINGGGGKDRLVGGRGNDHITGGGGDDRINGGRGSDTLVGGAGHDQFLFTKGSSFRH 297
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/178 (14%), Positives = 46/178 (25%), Gaps = 4/178 (2%)
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+ I + G G+ + + + I G+D + +G N
Sbjct: 149 FLPEGIDQLVWDAGLVPVKPGSTGTPGDDKLIGTRRNDHISGGKGNDTI----VGRGGND 204
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I G + T +++ G GND + G + GND G
Sbjct: 205 TLSGDGGKDVIKGGAGKDVLDGGTGRDTINGGRGNDTINGGGGKDRLVGGRGNDHITGGG 264
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
G D S + + + + + +E I
Sbjct: 265 GDDRINGGRGSDTLVGGAGHDQFLFTKGSSFRHGDVDVIEDFEIGADLIKLKGFGAID 322
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 59/225 (26%), Gaps = 37/225 (16%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D L T + G +N I+ +++VG GND + G+
Sbjct: 153 GIDQLVWDAGLVPVKPGSTGTPGDDKLIGTRRNDHISGGKGNDTIVGRGGNDTLSGDGGK 212
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+V +G DV DG +G DT D ++
Sbjct: 213 DVIKGGAGKDVLDGGTGRDTI----------------------NGGRGNDTING------ 244
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L + + G D + G D +
Sbjct: 245 ---------GGGKDRLVGGRGNDHITGGGGDDRINGGRGSDTLVGGAGHDQFLFTKGSSF 295
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+ D+ + + GA G + + I S D
Sbjct: 296 RHGDVDVIEDFEIGADLIKLKGFGAIDPQQWFHRAVKSGILSDSD 340
>gi|329848063|ref|ZP_08263091.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843126|gb|EGF92695.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1435
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/360 (13%), Positives = 90/360 (25%), Gaps = 18/360 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I D G D L G + +S + GG + A
Sbjct: 591 GNDTLYANGLTSGIADGGAGDDLIFAYSGANGGSGNDTIQSSGAQGGDGNDEITASGYSS 650
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G +GND + G+++ + G+D G G DT+ S +I +
Sbjct: 651 GMLYGEAGNDTLTGSNSGDHLDGGLGDDQLAGGVGDDTYVVN--SGDDQIAEAASQGTDQ 708
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQ----------RSILEYTASYEDLIQVIGQD 378
+ +++E L AD + LE A + L G D
Sbjct: 709 VNSSASFTLGANLENLILADGAAIDGTGNGRANVITGNESANRLEGGAGLDTLYGGAGND 768
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
V G D + + + + + +
Sbjct: 769 VLSGGTGADSLSGGSGNDTYVVDASGEAIVEAVFQGTDTVQASVGHTLAINVENLELTGS 828
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS---YLYLGSYDDL 495
++ L + G D + ++ V G D+
Sbjct: 829 GHINGNGNSAQNVLTGNSGNNILNGAAGNDTMAGGAGDDTFVVANSGDVVTEAAGEGADV 888
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED---LINAFADAPDLVQAGKD 552
+ +A +T + ++ L A + G D
Sbjct: 889 VQASINYTLSANVEILTLTGTANLTGTGNDLANGLVGNDGDNLLNGAGGNDALAGGLGND 948
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 71/524 (13%), Positives = 129/524 (24%), Gaps = 55/524 (10%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
E ++ + N + + D G+G T+L
Sbjct: 900 NVEILTLTGTANLTGTGNDLANGLVGNDGDNLLNGAGGNDALAGGLGNDTLLGGLGDD-- 957
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
V V D + + + A+F +
Sbjct: 958 ---------------SYVVDVAGDSVTELAGEGTDTVVAGLSHNLGANFENLMFAGTGNF 1002
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL----DLTLIGGVKNYID 244
V G +GN + + T+ G+D D + D
Sbjct: 1003 VGNGN--GLANAIVGNT---GNNWLEGAAGNDTLTGGLGNDTFVVDADDIVAENAGEGTD 1057
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
S S + G + + G++ + + GNS NN+ GND G G
Sbjct: 1058 WVLASRSYVLGANLESLALSGSGNLTATGNAVANRIGGNSGNNLIDGQGGNDTLQGGLGN 1117
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC----------IDSV 354
DT+ + + +++E L
Sbjct: 1118 DTYVIDG--AGDMVTENASEGTDAVQASVTYGLGANLENLVLTGSAHINGTGNGGNNTVT 1175
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS--EGRDITFDSYLY--LGSYDD 410
++L+ A + L+ +G D + G + EG D S Y G +
Sbjct: 1176 GNAGNNLLDGGAGADRLVGGLGDDTYYVDSIGDSVGENHLEGTDTIISSVSYSLFGRAVE 1235
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ + G+D + + + + L + D +
Sbjct: 1236 VLTLNGTDNLNGTGNSLNNTL----TGTNGNNLLDGGAGMDKLVGGLGDDTYYVDNALDN 1291
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
+G S Y L A + G G +
Sbjct: 1292 VTELHFQGTDTIISSVTYSL----LGRAVEIITLTGAGNINATGNSLGNTITGNDGSNRL 1347
Query: 531 A---SHEDLINAFADAPDLVQAG--KDHFSNFGYEEGRSITFNP 569
++ L + G KD ++F E SI N
Sbjct: 1348 DGGVGNDTLTGNLGADMFVFLTGSWKDTITDFSAAENDSINVNA 1391
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 55/419 (13%), Positives = 113/419 (26%), Gaps = 31/419 (7%)
Query: 171 SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL 230
+ + Y D + + + + + S + + GDDL
Sbjct: 161 NDTLTAGYYTYEMYGDDGNDLVDGRSSQYLNRLDGGAGDDTLYSYSNSWTSAHAGDGDDL 220
Query: 231 L----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES-VVGSSGNDVVIGNSA 285
+ D+ G + + G + N I + S ++G G+D+++GNSA
Sbjct: 221 IYAHSDVYGGAGNDTLMMTSGTHNGPGYGGDGNDEIVGAQGVASVLLGEGGDDILLGNSA 280
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA--------------- 330
++ +GND G + ++Y S +Y
Sbjct: 281 EDMLTGGAGNDSLTGGDNIPHYYYGTGSGDIAVYSGAVTDYQVTRDPDTQFVTVVDLRPD 340
Query: 331 NEHKQDFL-SDVERLRFADQC-----IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D L S +E L+F++ + + T + + +
Sbjct: 341 SPDGTDLLDSSIEALKFSNGTYLVDVVLAGANLGVLNFTGTDNPDTYAGSEDSNTAVGKG 400
Query: 385 HFYEFGLSEGRDITFDSYLY----LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
F + G D G+ D + + Y + +
Sbjct: 401 GNDSFNGNGGSDELQGDSGSDLLNGGTGSDRLHAAAAPGSYQTPWYNNTYSPPQLDRGSE 460
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS-YDDLRNVF 499
+ +D+++A G D VTF+ L
Sbjct: 461 TDTLNGGAGDDVLSAGYGDSVDGGEGTDSLFISFQGATSGVTFNLSLTSQEVGGATIQNI 520
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
S + G +F + + ++ L + + G D G
Sbjct: 521 ESAVWVEGSEFGDTVTDSGNPYGSFGLVFGMGGNDSLKAGYYTSSLYGNEGDDLVDGRG 579
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 44/298 (14%), Positives = 87/298 (29%), Gaps = 28/298 (9%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ NG T ++ + AD G+G T + IG ++G
Sbjct: 1158 TGSAHINGTGNGGNNTVTGNAGNNLLDGGAGADRLVGGLGDDTYY----VDSIGDSVGEN 1213
Query: 136 HPGSYNG--GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
H + Y + L + +S+ + G ++ + K
Sbjct: 1214 HLEGTDTIISSVSYSLFGRAVEVLTLNGTDNLNGTGNSLNNTLTGTNGNNLLDGGAGMDK 1273
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+ G LG++ Y ++ + + + +L+G I L
Sbjct: 1274 LVGG----LGDDTYYVDNALDNVTELHFQGTDTIISSVTYSLLGRAVEIITLTGAGNI-- 1327
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ G+S + + GN +N GND G+ G D F + S
Sbjct: 1328 ----------------NATGNSLGNTITGNDGSNRLDGGVGNDTLTGNLGADMFVFLTGS 1371
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ I F A + + + + ++ +AS D+
Sbjct: 1372 WKDTITDFSAAENDSINVNAYTAGVINTAMVTQMGADVLVNLGGGNTVTVLSASQADV 1429
Score = 39.0 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 55/175 (31%), Gaps = 1/175 (0%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
E+ G + ND GN+ N+V G+DV DG + D + + +
Sbjct: 6 GGANAETFTGGADNDTASGNAGNDVLIGKGGSDVLDGGADNDALYTDSLLGDNGTLDRDA 65
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ-VIGQDVFES 382
+ + +D ++V + + L +G ++
Sbjct: 66 TADTVNGGAGDDTISAGFGDSIDGGDGVDYLHVSFQGATSGISFDMMLSSQTVGGATIKN 125
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
+++ SE D+ + +Y + G + A +Y + N
Sbjct: 126 IENLLSVEGSEFNDMIKGAAMYWHGDAPYMHGMGGNDTLTAGYYTYEMYGDDGND 180
>gi|166365040|ref|YP_001657313.1| hypothetical protein MAE_22990 [Microcystis aeruginosa NIES-843]
gi|166087413|dbj|BAG02121.1| hypothetical protein MAE_22990 [Microcystis aeruginosa NIES-843]
Length = 445
Score = 71.7 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/375 (14%), Positives = 90/375 (24%), Gaps = 29/375 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----------DLTLIGGVKNYIDLNTESWS 251
GN+ Y ++ + G D + G + L
Sbjct: 6 GNDTYFVDNVGDIVKEVFDDAPGGTADTVLASVSYSLAPGTFGNQGYGIENLTLTGFGNI 65
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY- 310
+ G KN + + + G GND + G N+ G D DG G DT+F
Sbjct: 66 NATGNSKNNILTGNIRNNVLNGGLGNDTINGGLGNDTLDGGVGVDSMDGGDGNDTYFVDN 125
Query: 311 -APSYLYKIYRFENAIIVYDANEHKQDFLS--------DVERLRFAD-QCIDSVNVKQRS 360
+E L I++ + +
Sbjct: 126 VGDIVKEVFDDAPGGTADTVLASVSYSLAPGTFGNQGYGIENLTLTGFGNINATGNSKNN 185
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
IL AS G D F S + + LG++ L
Sbjct: 186 ILTGNASANTFFGTAGNDTINGGAGFDTANYS-----ALSNVVTLGAFGVLNKGALGTDT 240
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
A I G D A +A+ A + +
Sbjct: 241 LIAVESIVGSSLLGDTVDHSGASVALATGRVTNLATGVVTVNGTAAPLPLTFQVSQFENV 300
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
+ + D + G + G ++ A ++ LI
Sbjct: 301 IGSSFADTITGNSDNNILNGGAGNDSIN--GGAGNDSINGGAGNDSINGGAGNDTLIGGA 358
Query: 541 ADAPDLVQAGKDHFS 555
+ AG D F
Sbjct: 359 GNDTLTGDAGADKFR 373
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 31/82 (37%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + G N +I +S+ G +GND + G + N+ +GND
Sbjct: 302 GSSFADTITGNSDNNILNGGAGNDSINGGAGNDSINGGAGNDSINGGAGNDTLIGGAGND 361
Query: 297 VFDGSSGLDTFFYYAPSYLYKI 318
G +G D F + S
Sbjct: 362 TLTGDAGADKFRFNFLSEKVDT 383
>gi|220927083|ref|YP_002502385.1| Hemolysin-type calcium-binding region [Methylobacterium nodulans
ORS 2060]
gi|219951690|gb|ACL62082.1| Hemolysin-type calcium-binding region [Methylobacterium nodulans
ORS 2060]
Length = 615
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/235 (17%), Positives = 65/235 (27%), Gaps = 19/235 (8%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+L G + + T + G N I +S+ G SGND V G++ N++
Sbjct: 329 NLPQFGSSDHEVMTGTSETDEMHGGLGNDLIHGFDNNDSLYGDSGNDTVFGDAGNDLLIG 388
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GND G G DT F ++ ++ ++ D +
Sbjct: 389 GGGNDELRGFLGNDTLF--GEYGNDSLFGEQDNDLI--------DGGRGDDFASGGSGND 438
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ L + + G D SEG D F DD
Sbjct: 439 EVRGAAGNDHLFGDEGDDRVDGGEGDDQVRGWFGNDTLFGSEGNDQVFGEED-----DDF 493
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ G D L A +++L+ G
Sbjct: 494 LGAGSGNDYL----SGGLGTDSLYGEDGNDLLFGNAGNDELVGGAGSDTFGFGRG 544
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 82/263 (31%), Gaps = 23/263 (8%)
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
+ + E+ LG ++ +YG D ND+ + + D G
Sbjct: 341 MTGTSETDEMHGGLGNDLIHGFDNNDSLYG---DSGNDTVFGDAGNDLLIGGGGNDELRG 397
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------- 231
+ + ++G L + + + + + G+D L
Sbjct: 398 FLGNDTLFGEYGNDSLFGEQDNDLIDGG-RGDDFASGGSGNDEVRGAAGNDHLFGDEGDD 456
Query: 232 -------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
D + G N +E + G E + + + + + G G D + G
Sbjct: 457 RVDGGEGDDQVRGWFGNDTLFGSEGNDQVFGEEDDDFLGAGSGNDYLSGGLGTDSLYGED 516
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N++ F ++GND G +G DTF + I F V E +
Sbjct: 517 GNDLLFGNAGNDELVGGAGSDTFGFGRGDGQDLIRDF-----VTGGPERDVIAFNGGVFT 571
Query: 345 RFADQCIDSVNVKQRSILEYTAS 367
FA S V ++ Y A
Sbjct: 572 SFAAVQAASQQVGADVVITYGAG 594
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/245 (11%), Positives = 50/245 (20%), Gaps = 18/245 (7%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T + + + +F ++ + D + L
Sbjct: 318 TALLGSDALANNLPQFGSSDHEVMTGTSETDEMHG------GLGNDLIHGFDNNDSLYGD 371
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ + + G D+ E G D F Y + + N
Sbjct: 372 SGNDTVFGDAGNDLLIGGGGNDELRGFLGNDTLFGEYGNDSLFGEQDNDLIDGGRGDDFA 431
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
G E R L + + D G D + F D
Sbjct: 432 SGGSGNDEVRGAAGNDHLFGDEGDDRVDGGEGDDQVRGWFGNDTLFGSEGNDQVFGEEDD 491
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
+ G + D L A +++L+
Sbjct: 492 DFLGAGSGNDYLSGGLGTDSLYGE------------DGNDLLFGNAGNDELVGGAGSDTF 539
Query: 546 LVQAG 550
G
Sbjct: 540 GFGRG 544
>gi|254423049|ref|ZP_05036767.1| RHS Repeat family [Synechococcus sp. PCC 7335]
gi|196190538|gb|EDX85502.1| RHS Repeat family [Synechococcus sp. PCC 7335]
Length = 593
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 61/194 (31%), Gaps = 4/194 (2%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
++ + +++ G N I+ ++ +G N TI
Sbjct: 272 DVLGNQTSASIDSDADGVFNFTYTYEFGTLNAGSGVNLIEGTSDRDQIVGTDGAN-TIIG 330
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G +GND + G + G D+ G SG+DT Y + +
Sbjct: 331 GDGNDWLSGGAGNDTIEGGDGKDFLIGGLGADMLKGGSGIDTADYRTSATGINVDLDSGV 390
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E + D L+ +ERL ++ + L + L + G DV
Sbjct: 391 GT---GGEAEGDTLTSIERLFGSNLNDVISGTDEDEELRGNGGDDILAGLAGNDVLRGGW 447
Query: 385 HFYEFGLSEGRDIT 398
G D+
Sbjct: 448 GSDSLDGGAGNDLL 461
Score = 44.4 bits (103), Expect = 0.070, Method: Composition-based stats.
Identities = 28/216 (12%), Positives = 56/216 (25%), Gaps = 3/216 (1%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
Y D G+ T G + L+ S N
Sbjct: 269 YTYDVLGNQTSASIDSDADGVFNFTYTYEFGTLNAGSGVNLIEGTSDRDQIVGTDGANTI 328
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ + + +D++ +++
Sbjct: 329 IGGDGNDWLSGGAGNDTIEGGDGKDFLIGGLGADMLKGGSGIDTADYRTSATGINVDLDS 388
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ G L G N + T+ + G + +A + + G
Sbjct: 389 GVGTGGEA---EGDTLTSIERLFGSNLNDVISGTDEDEELRGNGGDDILAGLAGNDVLRG 445
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G+D + G + N++ +G D+ G G DTF+
Sbjct: 446 GWGSDSLDGGAGNDLLRGGAGADMILGGGGRDTFYL 481
>gi|188583548|ref|YP_001926993.1| Hemolysin-type calcium-binding region [Methylobacterium populi
BJ001]
gi|179347046|gb|ACB82458.1| Hemolysin-type calcium-binding region [Methylobacterium populi
BJ001]
Length = 546
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 60/203 (29%), Gaps = 9/203 (4%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
YI N + ++++G++G D + G++ ++V
Sbjct: 268 YGFLNKDEGTAYIVGGRGDDRLEADGSGNPVLGF-AGDDTLIGTAGADRLFGDAGDDVLR 326
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+G D G +G DT+F P + + + ++ ++E L+ A
Sbjct: 327 GGAGRDELVGGAGNDTYFVDTPGDRVFEGTGQGTDRIVATSSYRLADGQEIEILQLAKGA 386
Query: 351 IDSV-------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSY 402
+ L A L G D G D FD+
Sbjct: 387 GGTGWAPLSLTGNAFGQTLVGNAGDNRLDGGGGDDRLAGGLGDDRLTGGSGADTFVFDTR 446
Query: 403 LYLGSYDDLRNVFGSDRGAAARH 425
G+ D + + D H
Sbjct: 447 PGRGNVDHVSDFTAPDDVFQLDH 469
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 84/293 (28%), Gaps = 17/293 (5%)
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD--- 418
L + + + G V + + +D +Y+ G DD GS
Sbjct: 240 LALRPAADTPAEAFGNLVAAASQATGIDYGFLNKDEG-TAYIVGGRGDDRLEADGSGNPV 298
Query: 419 -RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
A I + DA + + D + A G +
Sbjct: 299 LGFAGDDTLIGTAGADRLFGDAGDDVLRGGAGRDELVGGAGNDTYFVDTPGDRVFEGTGQ 358
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDL 536
G + Y + + +GA + +AF + L A L
Sbjct: 359 GTDRIVATSSYRLADGQEIEILQLAKGAGGTGW----APLSLTGNAFGQTLVGNAGDNRL 414
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
D G D G + F+ + D + + D H +
Sbjct: 415 DGGGGDDRLAGGLGDD--RLTGGSGADTFVFDTRPGRGNVDHVSDFTAPDDVFQLDHAVF 472
Query: 597 HGMKEGRALGISGMQFKSV--MNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
+ G ++ QFK + + +E ++ AD + + K +L+ D G G
Sbjct: 473 SRLDIG---VLAPGQFKILGPVKAAEAAKTDADDRILYKQKTGELFYDADGSG 522
>gi|11762052|gb|AAG40304.1|AF314520_1 leukotoxin [Mannheimia glucosida]
Length = 953
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 47/331 (14%), Positives = 100/331 (30%), Gaps = 28/331 (8%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
AD L++ + T + F L P + R G++ + L
Sbjct: 507 ADKLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITKLNINRV 566
Query: 74 SI------HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F +N D+ + + V + G G + + E
Sbjct: 567 DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIVAKLGAGDDNVFVGSGTTE 626
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
I G G Y +D E + +V + + T +V +
Sbjct: 627 IDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VETGKALHEVTSTHTALVGN 684
Query: 188 IVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++ + + G Y + K ++ I + +D+ +
Sbjct: 685 REEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFN--------- 729
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + TI + + + G G+D++ G + ++ GND+ G G D
Sbjct: 730 ----DAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDI 785
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
F + I + + ++ + +D
Sbjct: 786 FVHRQGDGNDIITDSDGNDKLSFSDSNLKDL 816
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 62/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I +G+D V
Sbjct: 571 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-VAKLGAGDDNVF 619
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 620 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKALHEVTSTHT 679
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L VE + K +
Sbjct: 680 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVD 739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 740 TIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRQGD 792
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + D L + S+
Sbjct: 793 GNDIITDSDGNDKLSFSDSN 812
>gi|11762056|gb|AAG40306.1|AF314522_1 leukotoxin [Mannheimia glucosida]
Length = 953
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 47/331 (14%), Positives = 100/331 (30%), Gaps = 28/331 (8%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
AD L++ + T + F L P + R G++ + L
Sbjct: 507 ADKLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERIQTGKYEYITKLNINRV 566
Query: 74 SI------HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F +N D+ + + V + G G + + E
Sbjct: 567 DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIVAKLGAGDDNVFVGSGTTE 626
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
I G G Y +D E + +V + + T +V +
Sbjct: 627 IDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VETGKALHEVTSTHTALVGN 684
Query: 188 IVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++ + + G Y + K ++ I + +D+ +
Sbjct: 685 REEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFN--------- 729
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + TI + + + G G+D++ G + ++ GND+ G G D
Sbjct: 730 ----DAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDI 785
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
F + I + + ++ + +D
Sbjct: 786 FVHRQGDGNDIITDSDGNDKLSFSDSNLKDL 816
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 62/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I +G+D V
Sbjct: 571 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-VAKLGAGDDNVF 619
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 620 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKALHEVTSTHT 679
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L VE + K +
Sbjct: 680 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVD 739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 740 TIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRQGD 792
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + D L + S+
Sbjct: 793 GNDIITDSDGNDKLSFSDSN 812
>gi|83955527|ref|ZP_00964158.1| type I secretion target repeat protein [Sulfitobacter sp. NAS-14.1]
gi|83840171|gb|EAP79346.1| type I secretion target repeat protein [Sulfitobacter sp. NAS-14.1]
Length = 1896
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 52/410 (12%), Positives = 95/410 (23%), Gaps = 11/410 (2%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T S + AD G G I + G N +
Sbjct: 1229 NDTIYGGSGNDTITDVQGADEIYGGDGDDLIEAGIDTFSDYANDQPTVGGRPNPFFNSGD 1288
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ D D + + D +G ++ + ++YG +
Sbjct: 1289 PNKDDGRDFVDGGSGNDTIRTGDDSDTIYGGTGDDSINAGIDDDEVYGDDGDDSIIGSHG 1348
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
TIY G++ + V I G N +
Sbjct: 1349 -SDSLYGGDGNDTIYGGFGNEPIAGYEGEEVDATDPQPNNGKDYIEGGAGNDVLYGEDDN 1407
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF--------FYYAPSYLYKIYR 320
++++G + +D + G ++ G+D G G DT +
Sbjct: 1408 DTILGGADDDYIDGGIDDDSLDGGQGDDTILGGQGNDTIRGAQGHDEIDGGDGDDSILAG 1467
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
N + A D + + D + + A + +I D
Sbjct: 1468 NGNDDVKGGAGNDTIDGGQGNDTIDGGDGDDSILGGFGDDSILGGAGNDTIIAAGDNDTV 1527
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ G DI F N G +
Sbjct: 1528 DGGTGDDSISGVRGDDILFGGEGDDTIDGGEDNDSIDGGDGDDSLLGGFGDDTIEGGEGD 1587
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHF--SNFGCEEGRFVTFDSYLY 488
+ + + + G+D F N G D+ Y
Sbjct: 1588 DTISAGGGDDIISGGAGNDSLQGNDGRDTFTNVNGGDTIDGGAGTDASDY 1637
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 52/501 (10%), Positives = 114/501 (22%), Gaps = 45/501 (8%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + + G T D G G +++ + +G
Sbjct: 1109 TGDGNDVVNAGGGDDTIDGQGGNDTIDGGKYDDSLIGGDGNDSLVGGEGDDVL---IGNK 1165
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
V V ++ D+ + I
Sbjct: 1166 PGAIGVPDTDVPLVSTPFDQDTNPND----DKDTLIGGAGNDTIDGGDDADYIDGGDDDD 1221
Query: 196 GAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTE 248
G + IY D IY GDDL+ + + +
Sbjct: 1222 VIEGGIDNDTIYGGSGNDTITDVQGADEIYGGDGDDLIEAGIDTFSDYANDQPTVGGRPN 1281
Query: 249 SWSSIGG---YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G + + + +++ +D + G + ++ +D G G D
Sbjct: 1282 PFFNSGDPNKDDGRDFVDGGSGNDTIRTGDDSDTIYGGTGDDSINAGIDDDEVYGDDGDD 1341
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV-----NVKQRS 360
+ +Y + +Y ++ + E + D ++
Sbjct: 1342 SII--GSHGSDSLYGGDGNDTIYGGFGNEPIAGYEGEEVDATDPQPNNGKDYIEGGAGND 1399
Query: 361 ILEYTASYEDLIQVIGQDV---------FESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+L + ++ D + + +G D + +
Sbjct: 1400 VLYGEDDNDTILGGADDDYIDGGIDDDSLDGGQGDDTILGGQGNDTIRGAQGHDEIDGGD 1459
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ G ++ + ++ F D L G D
Sbjct: 1460 GDDSILAGNGNDDVKGGAGNDTIDGGQGNDTIDGGDGDDSILGGFGDDSILGGAGNDTII 1519
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
G + G D G G + +++
Sbjct: 1520 AAGDNDTVDGGTGDDSISGVRGDDILFGGE------------GDDTIDGGEDNDSIDGGD 1567
Query: 532 SHEDLINAFADAPDLVQAGKD 552
+ L+ F D G D
Sbjct: 1568 GDDSLLGGFGDDTIEGGEGDD 1588
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 66/494 (13%), Positives = 123/494 (24%), Gaps = 43/494 (8%)
Query: 64 KVVDLTFE----ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
+ L F E + + + + + S F EI + G G
Sbjct: 917 DLTGLNFRLRDLEPDSNGNGQNGTVDLYNADGTSAGSFKFTEIENIIGEEMA-GPVDGLD 975
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
+ A G G+ ++G D DS L +
Sbjct: 976 SGEDMAPGYTDAQGDQIDGTDGINDTIFGNGGDDTIDSGL------GDDTVDGGAGDDTF 1029
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT----L 235
T V + V + G G + ++ + + + G + + L
Sbjct: 1030 TLTDGVDNDVIIGGESGETDGDVIDSTAVDDDLTVTFTDKEEGTLTNGSGTTEFSEIERL 1089
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G + + ++ + N + +++ G GND + G ++ GN
Sbjct: 1090 ELGGGDDTVTGSGGDENVMTGDGNDVVNAGGGDDTIDGQGGNDTIDGGKYDDSLIGGDGN 1149
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G G D P + + + QD + D +
Sbjct: 1150 DSLVGGEGDDVLIGNKPGA----IGVPDTDVPLVSTPFDQDTNPN-------DDKDTLIG 1198
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD----SYLYLGSYDDL 411
++ + + DV E G D D +Y G DDL
Sbjct: 1199 GAGNDTIDGGDDADYIDGGDDDDVIEGGIDNDTIYGGSGNDTITDVQGADEIYGGDGDDL 1258
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
A T G + ++ + + D +
Sbjct: 1259 IEAGIDTFSDYANDQPTVGGRPNPFFNSGDPNKDDGRDFVDGGSGNDTIRTGDDSDTIYG 1318
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
G + D +Y DD +HG D +
Sbjct: 1319 GTGDDSINAGIDDDEVYGDDGDDSI-------------IGSHGSDSLYGGDGNDTIYGGF 1365
Query: 532 SHEDLINAFADAPD 545
+E + + D
Sbjct: 1366 GNEPIAGYEGEEVD 1379
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 58/372 (15%), Positives = 102/372 (27%), Gaps = 54/372 (14%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + T+ G+D +D + D + I
Sbjct: 1183 FDQDTNPNDDKDTLIGGAGNDTIDGGDDADYIDGGDDDDVIEGGID-------------N 1229
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR----FENA 324
+++ G SGND + + + G+D+ + +G+DTF YA R F +
Sbjct: 1230 DTIYGGSGNDTITDVQGADEIYGGDGDDLIE--AGIDTFSDYANDQPTVGGRPNPFFNSG 1287
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D D S + +R D + +++ G D
Sbjct: 1288 DPNKDDGRDFVDGGSGNDTIRTGDDSDTIYGGTGDDSINAGIDDDEVYGDDGDDSIIGSH 1347
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+G D Y G ++ + + A +G K+ A +
Sbjct: 1348 GSDSLYGGDGNDTI-----YGGFGNEPIAGYEGEEVDATDPQPNNG-KDYIEGGAGNDVL 1401
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
Y D I AD + D + G + D+ L D +R G D
Sbjct: 1402 YGEDDNDTILGGADDDYIDGGIDDDSLDGGQGD------DTILGGQGNDTIRGAQGHDEI 1455
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINA------------------FADAPDL 546
G + ++ A ++ + F D L
Sbjct: 1456 D-----GGDGDDSILAGNGNDDVKGGAGNDTIDGGQGNDTIDGGDGDDSILGGFGDDSIL 1510
Query: 547 VQAGKDHFSNFG 558
AG D G
Sbjct: 1511 GGAGNDTIIAAG 1522
Score = 45.2 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 5/110 (4%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + + +++ G GND + GN+ ++ + G+D G G DT +
Sbjct: 545 TDGTVGGDDVLTGGNGNDTIFGEGGNDSIEGNAGHDSIEGNHGDDTISGGGGKDTIYGDN 604
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ + + D D D + +
Sbjct: 605 NTGGASTPGGT-----TERESFEWDKAPDPHDTSAVDNNDNLGGGFVQDT 649
Score = 41.7 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 39/317 (12%), Positives = 79/317 (24%), Gaps = 14/317 (4%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ + D D G I + G G
Sbjct: 1390 DYIEGGAGNDVLYGEDDNDTILGGADDDYIDGGIDDDSLDGGQG-DDTILGGQGNDTIRG 1448
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
++ S + T D G
Sbjct: 1449 AQGHDEIDGGDGDDSILAGNGNDDVKGGAGNDT---IDGGQGNDTIDGGDGDDSILGGFG 1505
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ TI +G +D +D ++ G + I E +I G E N +I
Sbjct: 1506 DDSILGGAGNDTIIAAGDNDTVDGGTGDDSISGVRGDDILFGGEGDDTIDGGEDNDSIDG 1565
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+S++G G+D + G ++ G+D+ G +G D+
Sbjct: 1566 GDGDDSLLGGFGDDTIEGGEGDDTISAGGGDDIISGGAGNDSL--QGNDGRDTFTNVNGG 1623
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ SD + + + ++ + + + D +
Sbjct: 1624 DTIDGGAGTD---ASDYDIIDLRGALSPGGGYRLENVTPDNDAGDTIDGDSPNDGIDGTI 1680
Query: 385 HFYEFGLSEGRDITFDS 401
F + +E + F +
Sbjct: 1681 VFTDASGTETGRLDFTN 1697
Score = 39.0 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 63/531 (11%), Positives = 128/531 (24%), Gaps = 31/531 (5%)
Query: 34 VLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPR 93
++F +T N + + +S+ +
Sbjct: 648 DTGNVNVTFSVTGSNETPETTFSTDQQ--------KVHSITGDGQATNANSSLASLANQD 699
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+S + + I S + +G P+
Sbjct: 700 GESATYRLDFSKDVTNISFRINDIDNASKVVIVAVG---------PDGTRTPIKVDAGSG 750
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
N V Y + + DI + Y ++ ++
Sbjct: 751 INAHNQDGVGGYETLISGGGNGPDTDPYHSALVDIEGPVE-YLEITHTMDQSLSPGNHAG 809
Query: 214 KDSPFIQTIYDSGGDD--LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ + GG D + L+G + + G + + T+ + +
Sbjct: 810 INITDVYFDAPVGGVDGGAGNDLLMGDDGDDFIDGGAGDDMLFGGDDDDTLIGGDGDDQL 869
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G G D + G + + F + D DG +G + + + D
Sbjct: 870 TGGEGKDNISGGAGKDTIFGGTDGDEVDGGAGGFNADPALNTDDDTLDLTGLNFRLRDLE 929
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA---SYEDLIQVIGQDVFESMKHFYE 388
+ + + + K I + G+D+ +
Sbjct: 930 PDSNGNGQNGTVDLYNADGTSAGSFKFTEIENIIGEEMAGPVDGLDSGEDMAPGYTD-AQ 988
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+G D D+ G D + + G D T + +G + D E +
Sbjct: 989 GDQIDGTDGINDTIFGNGGDDTIDSGLGDDTVDGGAGDDTFTLTDGVDNDVIIGGESGET 1048
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
D+I++ A DL D F L V GS
Sbjct: 1049 DGDVIDSTAVDDDLTVTFTDKEEGTLTNGSGTTEFSEIERLELGGGDDTVTGSGGDENVM 1108
Query: 509 HYITH-------GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G ++ + LI + + G D
Sbjct: 1109 TGDGNDVVNAGGGDDTIDGQGGNDTIDGGKYDDSLIGGDGNDSLVGGEGDD 1159
>gi|189347155|ref|YP_001943684.1| Hemolysin-type calcium-binding region [Chlorobium limicola DSM 245]
gi|189341302|gb|ACD90705.1| Hemolysin-type calcium-binding region [Chlorobium limicola DSM 245]
Length = 824
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/401 (12%), Positives = 92/401 (22%), Gaps = 38/401 (9%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-------------- 231
D + Y G +Y GDD +
Sbjct: 185 LDGNDMLYSYEGNDTIEGG---SGNDLIDGGLDHDLLYGGEGDDTVYGGVYFDYSWYGWM 241
Query: 232 --DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
D ++ G N + + G + + + ++++ G +GND + G ++
Sbjct: 242 SGDDSIYGDAGNDFLDGSYGQDILDGGAGDDILHGGSGLDTLTGGNGNDTLYGGEYDDTL 301
Query: 290 FESSGNDVFDGSS-------------GLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQ 335
+GND+ G Y + ++Y +
Sbjct: 302 GGGAGNDLLYGMDEQFDEYSSDLLHGDDGDDTLYGGNGQDQLYGGIGNDTLDGGDGSDML 361
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV--IGQDVFESMKHFYEFGLSE 393
D D + L + + L Y+D Q G D F
Sbjct: 362 DGGDDHDSLDGSLGNDMIIGSAGNDTLSGGMVYDDDFQGWLSGDDTLYGDSGFDSLDGGA 421
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
G D+ + G G + D K Y +S
Sbjct: 422 GNDLLSGGEDNDTLSGGAGDDMLDGGGGIDSMSGGSG-DDTYYIDNSKDTVYESSGAGTD 480
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
+ ++ +H G + + D + G
Sbjct: 481 TVHSSINYTLRTNFEHLVLSGTSAINATGNSAENNITGNDANNIISGGAGNDVLT--GNG 538
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
G L ++ L + G D +
Sbjct: 539 GNDRLNGQTGDDVLYGGGGNDTLNGGDGNETLYGGDGNDLY 579
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/470 (12%), Positives = 118/470 (25%), Gaps = 33/470 (7%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ + D+ G G T+ N + G G
Sbjct: 248 YGDAGNDFLDGSYGQDILDGGAGDDILHGGSGLDTLTGGNGNDTLYGGEYDDTLGGGAGN 307
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+YG+D ++ S + + G+ G
Sbjct: 308 DLLYGMDEQFDEYSSDLLHGDDGDDTLYGGNGQDQLYGGIGND---TLDGGDGSDMLDGG 364
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
++ S I S G+D L + + ++ G ++
Sbjct: 365 DD----HDSLDGSLGNDMIIGSAGNDTL--SGGMVYDDDFQGWLSGDDTLYGDSGFDSLD 418
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G ND + G + +++ G D G SG DT++ +Y
Sbjct: 419 GGAGNDLLSGGEDNDTLSGGAGDDMLDGGGGIDSMSGGSGDDTYYIDNSK--DTVYESSG 476
Query: 324 AIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
A + ++ E L + I++ + + + + G DV
Sbjct: 477 AGTDTVHSSINYTLRTNFEHLVLSGTSAINATGNSAENNITGNDANNIISGGAGNDVLTG 536
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G D+ Y G +D N +
Sbjct: 537 NGGNDRLNGQTGDDVL-----YGGGGNDTLNGGDGNETLY--------------GGDGND 577
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
L Y++S ++ + ++ E F L + ++ +
Sbjct: 578 LYYVSSSGTILVEEDVSGYDTVYTTVNYLLPEYVESML--FMGSFSLEGTGNGQDNLLTG 635
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
A G L A ++ L + L + G D
Sbjct: 636 NSAENSINGLGGNDTLNGAAGNDILLGGAGNDLLEGVSGNDILLGEEGAD 685
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/349 (12%), Positives = 92/349 (26%), Gaps = 20/349 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + T M D D +G I+ + +
Sbjct: 335 YGGNGQDQLYGGIGNDTLDGGDGSDMLDGGDDHDSLDGSLGNDMIIGSAGNDTLSGGMVY 394
Query: 135 MHPGSY--NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
+G +YG D + + + + G I ++
Sbjct: 395 DDDFQGWLSGDDTLYGDSGFDSLDGGAGNDLLSGGEDNDTLSGGAGDDMLDGGGGIDSMS 454
Query: 193 KIYGAPKGSLGNN-IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
G + N+ E + + + + + ++ G + +
Sbjct: 455 GGSGDDTYYIDNSKDTVYESSGAGTDTVHSSINYTLRTNFEHLVLSGTSAINATGNSAEN 514
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF--- 308
+I G + N I+ + + G+ GND + G + ++V + GND +G G +T +
Sbjct: 515 NITGNDANNIISGGAGNDVLTGNGGNDRLNGQTGDDVLYGGGGNDTLNGGDGNETLYGGD 574
Query: 309 ----YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF----------ADQCIDSV 354
YY S + + + VE + F Q
Sbjct: 575 GNDLYYVSSSGTILVEEDVSGYDTVYTTVNYLLPEYVESMLFMGSFSLEGTGNGQDNLLT 634
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + + L G D+ G DI
Sbjct: 635 GNSAENSINGLGGNDTLNGAAGNDILLGGAGNDLLEGVSGNDILLGEEG 683
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 64/247 (25%), Gaps = 20/247 (8%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G + + + G + N + + +++ G SGND++ G +++ + G+
Sbjct: 165 TGTDGDDFITGEWTDDYLFGLDGNDMLYSYEGNDTIEGGSGNDLIDGGLDHDLLYGGEGD 224
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G D +Y S IY L +
Sbjct: 225 DTVYGGVYFDYSWYGWMSGDDSIYGDAGND-----------------FLDGSYGQDILDG 267
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
IL + + L G D ++ G G D+ + Y +
Sbjct: 268 GAGDDILHGGSGLDTLTGGNGNDTLYGGEYDDTLGGGAGNDLLYGMDEQFDEY---SSDL 324
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
Y +G + L+ + L +G D
Sbjct: 325 LHGDDGDDTLYGGNGQDQLYGGIGNDTLDGGDGSDMLDGGDDHDSLDGSLGNDMIIGSAG 384
Query: 476 EEGRFVT 482
+
Sbjct: 385 NDTLSGG 391
Score = 50.6 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 70/246 (28%), Gaps = 26/246 (10%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
FE + ++ N + + DV G + +
Sbjct: 493 NFEHLVLSGTSAINATGNSAENNITGNDANNIISGGAGNDVLTGNGGNDRLNGQTGDDVL 552
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
G +G +YG D + + +S S D + + +
Sbjct: 553 YGGGGNDTLNGGDGNETLYGGDGN-DLYYVSSSGTILVEEDVSGYDTVYTTVNYLLPEYV 611
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
++ + GN + + +I GG+D L+
Sbjct: 612 ESMLFMGSFSLEGTGN---GQDNLLTGNSAENSINGLGGNDTLN---------------- 652
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
G N + + + G SGND+++G ++ SG D G +G DT F
Sbjct: 653 ------GAAGNDILLGGAGNDLLEGVSGNDILLGEEGADILKGGSGADALYGDAGDDTLF 706
Query: 309 YYAPSY 314
+
Sbjct: 707 FDLSDS 712
>gi|149043716|gb|EDL97167.1| matrix metallopeptidase 11, isoform CRA_a [Rattus norvegicus]
Length = 472
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 68/216 (31%), Gaps = 53/216 (24%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 104 LSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALRVWSEVTPLTFTEVHEGR 156
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G KGT L
Sbjct: 157 ADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIG-DKGTDLL 213
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H + ++MS +F Y
Sbjct: 214 QVAAHEFGHVLGLQHT-------------------TAAKALMS--------PFYTFRYPL 246
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
+ D +Q +YG P+ + + + Q
Sbjct: 247 SLSPDDRRGIQHLYGRPQLTPTSPTPTLSSQAGTDT 282
>gi|167648757|ref|YP_001686420.1| glycoside hydrolase family protein [Caulobacter sp. K31]
gi|167351187|gb|ABZ73922.1| glycoside hydrolase family 16 [Caulobacter sp. K31]
Length = 907
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/343 (13%), Positives = 88/343 (25%), Gaps = 28/343 (8%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD----------GSSGLDTFFYYAPSY 314
T + VG+ ++ + GN+ +N GND D G +G D +
Sbjct: 520 GTDDVNGVGNLLDNKITGNAGSNRLEGGDGNDTLDGAGGVKDVLIGGAGDDIYIVRTGKE 579
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQ 373
+ + + ++ E L I+ + L A+ L
Sbjct: 580 --TLQEAASQGADVVQSAVSWTLGANFENLTLTGSGAINGFGNDLDNSLIGNATANRLEG 637
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D+ + G D + G+D +A + E
Sbjct: 638 GAGNDMLDGRGGGDTLVGGLGNDTY--VVRDARDVLVEQANQGTDGVQSAVSWTLGANFE 695
Query: 434 GRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFV----TFDSYL 487
++ + D ++ D G D + + +
Sbjct: 696 NLALIGTASINATGNELDNRIMGNAGDNRIDGGAGNDLMIGGAGNDTYVIDSIRDLVTEK 755
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH--EDLINAFADAPD 545
YD + + GA + G + I + L +
Sbjct: 756 VGEGYDTVESKVTWTLGANVEKLVLIGTAAIDGAGNADSNTLIGNSAANRLDGGAGNDRI 815
Query: 546 LVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRS 588
AG D +G + + + D+ FG+
Sbjct: 816 DGGAGAD--QLWGGAGNDTFVYTSTHFG---KDVIKDFGTGFD 853
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/322 (13%), Positives = 94/322 (29%), Gaps = 52/322 (16%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFIS--------- 83
D+ + E +V + A+ W+ + FE ++
Sbjct: 570 DIYIVRTGKETLQEAASQGADVVQSAV-SWT--LGANFENLTLTGSGAINGFGNDLDNSL 626
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
N + M D G+G T + +A +
Sbjct: 627 IGNATANRLEGGAGNDMLDGRGGGDTLVGGLGNDTYVVRDARDVL--------------- 671
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
V+ + + S +S+ + + A G + + + + + G+ G
Sbjct: 672 -----VEQANQGTDGVQSAVSWTLGANFENLALIGTASINATGNELDNRIM-----GNAG 721
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-------SIGGY 256
+N + + G+D + + + ++G
Sbjct: 722 DN------RIDGGAGNDLMIGGAGNDTY-VIDSIRDLVTEKVGEGYDTVESKVTWTLGAN 774
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + + I+ G++ ++ +IGNSA N +GND DG +G D + A + +
Sbjct: 775 VEKLVLIGTAAIDGA-GNADSNTLIGNSAANRLDGGAGNDRIDGGAGADQLWGGAGNDTF 833
Query: 317 KIYRFENAIIVYDANEHKQDFL 338
V D L
Sbjct: 834 VYTSTHFGKDVIKDFGTGFDVL 855
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 14/145 (9%), Positives = 42/145 (28%), Gaps = 11/145 (7%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV---------GSSGNDVVIG 282
+ G ++ E ++ + + +E+++ G+ ++ +
Sbjct: 59 TYFVYGFDDKIVENAGEGIDTVKSTALHYNL--GANVENLILEGNARFGLGNDLDNFISA 116
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ + GNDV G + D F + + F+ + +++ V+
Sbjct: 117 GAGSQTLNGGKGNDVLTGGADADIFVVVKGNGSDTVNDFQVGVDRIQLSQYGLTSFDMVK 176
Query: 343 RLRFADQCIDSVNVKQRSILEYTAS 367
+ + L
Sbjct: 177 SAMTQKGADVVIKLSDTESLTLRDH 201
>gi|6981212|ref|NP_037112.1| stromelysin-3 [Rattus norvegicus]
gi|1762128|gb|AAC53061.1| stromelysin 3 [Rattus norvegicus]
gi|133777189|gb|AAH99781.2| Matrix metallopeptidase 11 [Rattus norvegicus]
Length = 458
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 68/216 (31%), Gaps = 53/216 (24%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 71 LSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALRVWSEVTPLTFTEVHEGR 123
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G KGT L
Sbjct: 124 ADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIG-DKGTDLL 180
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H + ++MS +F Y
Sbjct: 181 QVAAHEFGHVLGLQHT-------------------TAAKALMS--------PFYTFRYPL 213
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
+ D +Q +YG P+ + + + Q
Sbjct: 214 SLSPDDRRGIQHLYGRPQLTPTSPTPTLSSQAGTDT 249
>gi|78099008|sp|Q499S5|MMP11_RAT RecName: Full=Stromelysin-3; Short=SL-3; Short=ST3; AltName:
Full=Matrix metalloproteinase-11; Short=MMP-11; Flags:
Precursor
gi|149043717|gb|EDL97168.1| matrix metallopeptidase 11, isoform CRA_b [Rattus norvegicus]
gi|149043718|gb|EDL97169.1| matrix metallopeptidase 11, isoform CRA_b [Rattus norvegicus]
Length = 491
Score = 71.4 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 68/216 (31%), Gaps = 53/216 (24%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 104 LSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALRVWSEVTPLTFTEVHEGR 156
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G KGT L
Sbjct: 157 ADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIG-DKGTDLL 213
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H + ++MS +F Y
Sbjct: 214 QVAAHEFGHVLGLQHT-------------------TAAKALMS--------PFYTFRYPL 246
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
+ D +Q +YG P+ + + + Q
Sbjct: 247 SLSPDDRRGIQHLYGRPQLTPTSPTPTLSSQAGTDT 282
>gi|4505213|ref|NP_002420.1| matrix metalloproteinase-19 isoform rasi-1 preproprotein [Homo
sapiens]
gi|12643345|sp|Q99542|MMP19_HUMAN RecName: Full=Matrix metalloproteinase-19; Short=MMP-19; AltName:
Full=Matrix metalloproteinase RASI; AltName: Full=Matrix
metalloproteinase-18; Short=MMP-18; Flags: Precursor
gi|1731986|emb|CAA63299.1| MMP-19 (matrix metalloproteinase) [Homo sapiens]
gi|2228244|gb|AAB63008.1| matrix metalloproteinase RASI-1 [Homo sapiens]
gi|2253587|gb|AAC51521.1| matrix metalloproteinase RASI-1 [Homo sapiens]
gi|29791916|gb|AAH50368.1| Matrix metallopeptidase 19 [Homo sapiens]
gi|51234137|gb|AAT97983.1| matrix metalloproteinase 19 [Homo sapiens]
gi|312153168|gb|ADQ33096.1| matrix metallopeptidase 19 [synthetic construct]
Length = 508
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 51/162 (31%), Gaps = 38/162 (23%)
Query: 50 NAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF--------- 99
A+ R A +WS V LTF+E + +DI+
Sbjct: 124 TARAALRQAFQDWSNVAPLTFQEVQAGAADIRLSFHGRQSSYCSNTFDGPGRVLAHADIP 183
Query: 100 --MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
++FD+ + W G +G L A HE+GHALGL H
Sbjct: 184 ELGSVHFDEDEFWTEGTYRGVNLRIIAAHEVGHALGLGH--------------------- 222
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
Y + + + D+ +Q +YG
Sbjct: 223 -----SRYSQALMAPVYEGYRPHFKLHPDDVAGIQALYGKKS 259
>gi|300867686|ref|ZP_07112331.1| hypothetical protein OSCI_3460025 [Oscillatoria sp. PCC 6506]
gi|300334269|emb|CBN57503.1| hypothetical protein OSCI_3460025 [Oscillatoria sp. PCC 6506]
Length = 1568
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 72/247 (29%), Gaps = 7/247 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T+ + G+D L GG + +L++ + G N + +
Sbjct: 1313 DDLIFGDKGNDTLLGNEGNDTL----YGGTLDPSNLDSTGQDLLFGGTGNDYLNGEEGED 1368
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND V N++ G+D+ G G DT + +
Sbjct: 1369 TLSGGDGNDTVQSGKGNDIAVGDLGDDLLFGDEGNDTLCGGDGNDTIYGDTGSPLAVGTA 1428
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + + L + L + LI D+ + +
Sbjct: 1429 GGQDQMCGGLGDDFLYGNEGQDTLNGYVGNDTLYGGKDDDYLIGGANNDLLKGDEGNDSL 1488
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G DI L +G D F + + AL +AS
Sbjct: 1489 LGGSGNDI---FALVIGEGSDTILDFQTGQDLIGLSNGLSFFDLSITQGNNAALIRLAST 1545
Query: 450 EDLINAF 456
+L+ +
Sbjct: 1546 NELLASV 1552
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 82/271 (30%), Gaps = 17/271 (6%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
++ D G + ++ L G +N + + +SI G + + + +++ G N
Sbjct: 1209 FPSLSDIPGPNAVENILNGSDRNDDIIGDNANNSINGLDGSDRLLGQAGNDNIYGGFPNI 1268
Query: 279 VVIGNSAN-NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ IG + ++ + GND +G++G D F + + D
Sbjct: 1269 IPIGPDVDPDLLLGNEGNDYLNGNAGNDAIF----AGKDNDIAIGGKDDDLIFGDKGNDT 1324
Query: 338 LSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
L E L +++ + +L + L G+D +G
Sbjct: 1325 LLGNEGNDTLYGGTLDPSNLDSTGQDLLFGGTGNDYLNGEEGEDTLSGGDGNDTVQSGKG 1384
Query: 395 RDITFDS-----YLYLGSYDDLRNVFGSDRGAAARHY----ITHGVKEGRNPDAFKALEY 445
DI D L G+D T G ++ Y
Sbjct: 1385 NDIAVGDLGDDLLFGDEGNDTLCGGDGNDTIYGDTGSPLAVGTAGGQDQMCGGLGDDFLY 1444
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+D +N + L D + G
Sbjct: 1445 GNEGQDTLNGYVGNDTLYGGKDDDYLIGGAN 1475
>gi|73621170|sp|Q9ETX2|LKTA_MANGL RecName: Full=Leukotoxin; Short=Lkt
gi|11762046|gb|AAG40301.1|AF314517_1 leukotoxin [Mannheimia glucosida]
gi|11762048|gb|AAG40302.1|AF314518_1 leukotoxin [Mannheimia glucosida]
Length = 953
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/331 (14%), Positives = 100/331 (30%), Gaps = 28/331 (8%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
AD L++ + T + F L P + R G++ + L
Sbjct: 507 ADKLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITKLNINRV 566
Query: 74 SI------HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F +N D+ + + V + G G + + E
Sbjct: 567 DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIVAKLGAGDDNVFVGSGTTE 626
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
I G G Y +D E + +V + + T +V +
Sbjct: 627 IDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VETGKALHEVTSTHTALVGN 684
Query: 188 IVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++ + + G Y + K ++ I + +D+ +
Sbjct: 685 REEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFN--------- 729
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + TI + + + G G+D++ G + ++ GND+ G G D
Sbjct: 730 ----DAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDI 785
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
F + I + + ++ + +D
Sbjct: 786 FVHRQGDGNDIITDSDGNDKLSFSDSNLKDL 816
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 62/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I +G+D V
Sbjct: 571 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-VAKLGAGDDNVF 619
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 620 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKALHEVTSTHT 679
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L VE + K +
Sbjct: 680 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVD 739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 740 TIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRQGD 792
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + D L + S+
Sbjct: 793 GNDIITDSDGNDKLSFSDSN 812
>gi|114329053|ref|YP_746210.1| glycosyltransferase [Granulibacter bethesdensis CGDNIH1]
gi|114317227|gb|ABI63287.1| putative glycosyltransferase [Granulibacter bethesdensis CGDNIH1]
Length = 122
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F Y + + D+ A P DH+ G+ EGR F+P+ Y T+ D+ +
Sbjct: 49 FDPDFYRSRYLDVAEA-GIDP------VDHYFTVGWREGRQPNAAFDPEAYQTANPDVRD 101
Query: 582 VFGSDRSAAAQHYITHGMKEGR 603
+ HY+ G +EGR
Sbjct: 102 A----QINPFAHYLLRGYREGR 119
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 12/82 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
FD Y Y D+ HY T G +EGR P+ AF Y ++ D+ +A
Sbjct: 49 FDPDFYRSRYLDVAEAGID----PVDHYFTVGWREGRQPNAAFDPEAYQTANPDVRDAQI 104
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
+ H+ GY EGR
Sbjct: 105 NP-------FAHYLLRGYREGR 119
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 13/88 (14%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYD 493
N F Y + + D+ A D DH+ G EGR FD Y +
Sbjct: 45 NVLIFDPDFYRSRYLDVAEAGIDP-------VDHYFTVGWREGRQPNAAFDPEAYQTANP 97
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNP 521
D+R+ + HY+ G +EGR
Sbjct: 98 DVRDAQIN----PFAHYLLRGYREGRPL 121
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 12/86 (13%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLI 453
+ FD Y Y D+ HY T G +EGR P+ AF Y ++ D+
Sbjct: 45 NVLIFDPDFYRSRYLDVAEA----GIDPVDHYFTVGWREGRQPNAAFDPEAYQTANPDVR 100
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGR 479
+A + H+ G EGR
Sbjct: 101 DAQINP-------FAHYLLRGYREGR 119
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 12/104 (11%)
Query: 337 FLSDVERLRFAD--QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
S+V LR D + +NV Y + Y D + G D H++ G EG
Sbjct: 25 TPSNVISLRGGDTLAVENILNVLIFDPDFYRSRYLD-VAEAGIDPV---DHYFTVGWREG 80
Query: 395 RDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
R FD Y + D+R+ + HY+ G +EGR
Sbjct: 81 RQPNAAFDPEAYQTANPDVRDA----QINPFAHYLLRGYREGRP 120
Score = 37.5 bits (85), Expect = 7.0, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+ F+PD Y + Y D+ HY T G +EGR
Sbjct: 47 LIFDPDFYRSRYLDVAEA----GIDPVDHYFTVGWREGR 81
>gi|73621152|sp|Q9EV33|LKA14_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762028|gb|AAG40292.1|AF314508_1 leukotoxin [Mannheimia haemolytica]
Length = 953
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 83/266 (31%), Gaps = 22/266 (8%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T + F +N D+ + + + + G G + + EI
Sbjct: 572 TDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGTTEIDGGE 631
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA-V 191
G G Y +D E + +V + + T +V + +
Sbjct: 632 GYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VESGKALHEVTSTHTALVGNREEKI 689
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ + + G Y + K ++ I + +D+ +
Sbjct: 690 EYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFN-------------D 730
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + TI + + + G G+D++ G + ++ GND+ G G D F +
Sbjct: 731 AFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRQ 790
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDF 337
I E + ++ + +D
Sbjct: 791 GDGNDSITESEGNDKLSFSDSNLKDL 816
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 60/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I G+D V
Sbjct: 571 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-IAKLGEGDDNVF 619
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 620 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVESGKALHEVTSTHT 679
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L VE + K +
Sbjct: 680 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVD 739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 740 TIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRQGD 792
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + L + S+
Sbjct: 793 GNDSITESEGNDKLSFSDSN 812
>gi|83310367|ref|YP_420631.1| large exoprotein [Magnetospirillum magneticum AMB-1]
gi|82945208|dbj|BAE50072.1| Large exoprotein [Magnetospirillum magneticum AMB-1]
Length = 5299
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 74/589 (12%), Positives = 136/589 (23%), Gaps = 55/589 (9%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
+ L + F D T ++ I N LG ++ +TF
Sbjct: 4321 DPAVQALGAGDSMTKTFTVTSADGTDTQEVTVTINGSNDGPVVSGPVDLGATAEDHSITF 4380
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ I ++ V + N D + + ++ GH
Sbjct: 4381 TAQQLLGHASDIDGDSLSVSNLSAGNGTI-SQNADGSYTFTPNADFNGEVNVTYTVSDGH 4439
Query: 131 ALGLMHPGSYNGGYPVYG-VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
S++ G +D S D + +A T VS++
Sbjct: 4440 GGTTSGSASFDVTSVNDGPTTSDVTLASGTEDRSVTIKASDLLGNAHDVDGDTLSVSNLS 4499
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQ---QKDSPFIQTIYDSGGDDLLDLTLI---------- 236
A + Y + T+ D G
Sbjct: 4500 A----SNGTITDNHDGTYTFTPNHDFSGNVDLSYTVSDGQGGSTAGTAHFGMAAVADSPV 4555
Query: 237 -GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+DL ++ G N T++ + + V GSSG+DV+ G+ +V + +
Sbjct: 4556 LSASNITVDLGAGQAQTLNGTTGNDTLSGGSGNDVVNGSSGDDVLYGDGTGSVTVPLNIS 4615
Query: 296 DVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQD------------ 336
D + G ++ S + + + A
Sbjct: 4616 DRLSDTDGSESLGSVTIGGLPAGASLSAGTHNSDGTWTLTPAQLTGLSVTTTEGTALHLS 4675
Query: 337 -FLSDVERLRFADQCID-------SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ E + S L+ A + L G D
Sbjct: 4676 VTATSTEASNGSTATTTTSFDVSFSGTAAGNDTLDGGAGNDTLFGGAGNDTLTGGAGADL 4735
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG-----RNPDAFKAL 443
+G D+ S S + G A T R L
Sbjct: 4736 LEGGDGNDVLNYSTDGTWSGGFVSQNVGDTTHAGTNETYTITGDNDSQDVFRGGAGTDTL 4795
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ ++ L + + D +Y D+ G+
Sbjct: 4796 VMGSGNDALFLDDGYSGSPTGGARIDGIESIVAGDGNDVVDLTSSKYTYGDVTIDGGAGN 4855
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G L + ++ L G D
Sbjct: 4856 DVLM---GNAGNDVIDGGTGNDVLYGASGNDTLRGGDGADTLDGGYGAD 4901
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 78/272 (28%), Gaps = 13/272 (4%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+T T + ++ + V + D G G T+
Sbjct: 4676 VTATSTEASNGSTATTTTSFDVSFSGTAAGNDTLDGGAGNDTLFGGAGNDTLTGGAGADL 4735
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ G + + + + + ++ + +
Sbjct: 4736 LEGGDG----NDVLNYSTDGTWSGGFVSQNVGDTTHAGTNETYTITGDNDSQDVFRGGAG 4791
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ G L + I++I G+D++DLT
Sbjct: 4792 TDTLVMGSGNDALFLDDGYSGSPTGGARIDGIESIVAGDGNDVVDLTSSKYT-------- 4843
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+I G N + + + + G +GNDV+ G S N+ G D DG G DT
Sbjct: 4844 YGDVTIDGGAGNDVLMGNAGNDVIDGGTGNDVLYGASGNDTLRGGDGADTLDGGYGADTI 4903
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
A + L I ++A YD D L
Sbjct: 4904 DAGAGNDLGIIKGGQSAGDNYDGGT-GTDTLR 4934
>gi|86749366|ref|YP_485862.1| VCBS [Rhodopseudomonas palustris HaA2]
gi|86572394|gb|ABD06951.1| VCBS [Rhodopseudomonas palustris HaA2]
Length = 5769
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 52/303 (17%), Positives = 94/303 (31%), Gaps = 17/303 (5%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
F S+ + FI+ S + D AD G G I+ +
Sbjct: 5424 FRTVSVSTGNNFIAGEIEAANKITGGSGADLIFGGDLADTLNGGGGNNLIVGGKGNDTLS 5483
Query: 130 HALGLMH-----PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+ G + G+ + D+ ++ ++ +S
Sbjct: 5484 ASTGNDVFAFGIQDGTDTITDSSGIADAIFIDTNGAALSGLSAYDNNNGTSSGSLVIQYN 5543
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD----SGGDDLLDLTLIGGVK 240
I V G + + ++ + D SGG +DL+
Sbjct: 5544 GQQITVVDHFGGKAIERISFDGGSVDGYDLGTSIYTVRTDDPNSSGGARTVDLS-FTSSD 5602
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N+I S ++I G I + + G G+D++IG N++ SGND G
Sbjct: 5603 NFIAGEDGSANAITGGSARDLIFGGGHDDFLSGGEGSDLLIGGGGNDLLAGGSGNDTLRG 5662
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+G DTF N + D + + D L L A ++V+
Sbjct: 5663 GAGADTFELSNT-------GSSNFDTILDYSSAEGDTLDLSALLDAAYGPGNNVDASFVR 5715
Query: 361 ILE 363
++
Sbjct: 5716 LVN 5718
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 58/417 (13%), Positives = 110/417 (26%), Gaps = 19/417 (4%)
Query: 91 TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH-------EIGHALGLMHPGSYNGG 143
+NF D +G + E +G + +
Sbjct: 5098 FISAADIAAGMLNFAPVDNVFTNVGSVSFGFEVMDSTGTSDATERTITIGFGNANQGDFT 5157
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS-----DIVAVQKIYGAP 198
P Y D ++ + S + S T + ++ YG+
Sbjct: 5158 SPNYDSLVDVVQNAGVYSYSDAGGSDTLRIPNSNFATLTSLSFLRSDNNLEIGWASYGSN 5217
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ N Y + F+ S G + L ++ + I G E
Sbjct: 5218 GYATVLNQYVG--TNQFENFLFQSNASYGGVAI-AGLYTLAQSLDNTGLSGSRIIAGTEA 5274
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ +I + + G+ G+D + GN+ N++ GND +G DT+ + I
Sbjct: 5275 SDSIYGGVNTDLMFGNGGHDTLYGNAGNDLLIGGLGNDRLEGGLNDDTYLFSLADGNDTI 5334
Query: 319 YRFENAIIVYDANEHKQD-FLSDVERLRFADQCIDSVNVKQRSILEYTASYE---DLIQV 374
+ + D + A + ++ A Y+ +
Sbjct: 5335 FDAGGTGDRIVIKTNGADLTGLNAHDTSSAAGTGHLMIQFNGQSVDVEAQYDGTGYAVNT 5394
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
I D + G D D+ + N F + AA +
Sbjct: 5395 INFDNGTVYGYTLGDYTFNGSDPATDADGFRTVSVSTGNNFIAGEIEAANKITGGSGADL 5454
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+LI L + FG ++G DS +
Sbjct: 5455 IFGGDLADTLNGGGGNNLIVGGKGNDTLSASTGNDVFAFGIQDGTDTITDSSGIADA 5511
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/223 (13%), Positives = 63/223 (28%), Gaps = 9/223 (4%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-YKIYRFE 322
+ + +VG G++ + GN N+ G++ G +G DT Y S +
Sbjct: 3277 GGSADDILVGGVGDNKLFGNGGNDTLIGGGGSNTIQGGAGNDTIIYNVGSGGVDTVEGGS 3336
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + ++ + + N+ L A+YE + + V
Sbjct: 3337 DTDTQIIVGTGGAETF-NINAVSLGGISHVAANIGATVELADGANYEVATTAVEEWVVNG 3395
Query: 383 MKHFYEF-------GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
F G DL G R + V+ G
Sbjct: 3396 GGGGDTFSVTGALLGTGLATSTLHIDGGDGNDVVDLSGYAGDIRVVSDGGADADRVQFGF 3455
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ + + A + + V ++ +F +G
Sbjct: 3456 DYNEATYAKVFALDGVTLIGVDVTYNGVTSTFTNYESFVFTDG 3498
Score = 40.9 bits (94), Expect = 0.65, Method: Composition-based stats.
Identities = 61/509 (11%), Positives = 127/509 (24%), Gaps = 37/509 (7%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
G+ + + A+ + L G
Sbjct: 5210 GWASYGSNGYATVLNQYVGTNQFENFLFQSNASYGGVAIAGLYT---LAQSLDNTGLSGS 5266
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
+ +DS V + M + D +G ++ + ++ G ++
Sbjct: 5267 RIIAGTEASDSIYGGVNTDLMFGNGGHDTLYGNAGNDLLIGGLGNDRLEGGLN----DDT 5322
Query: 207 YKIEVQQKDSPFIQTIYDSGGD-DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
Y + TI+D+GG D + + G ++ + S ++ G+ Q
Sbjct: 5323 YLF----SLADGNDTIFDAGGTGDRIVIKTNGADLTGLNAHDTSSAAGTGHLMIQFNGQS 5378
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+E+ +G V N N + + D +G D + N I
Sbjct: 5379 VDVEAQYDGTGYAVNTINFDNGTVYGYTLGD--YTFNGSDPATDADGFRTVSVSTGNNFI 5436
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM-- 383
+K S + + D +++ + L G DVF
Sbjct: 5437 AGEIEAANKITGGSGADLIFGGDLADTLNGGGGNNLIVGGKGNDTLSASTGNDVFAFGIQ 5496
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
S G D+ + L + D G+
Sbjct: 5497 DGTDTITDSSG---IADAIFIDTNGAALSGLSAYDNNNGTSSGSLVIQYNGQQITVVDHF 5553
Query: 444 EYIASHEDLINAFADAP-----DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
A + + + V D ++ G ++F S + +D
Sbjct: 5554 GGKAIERISFDGGSVDGYDLGTSIYTVRTDDPNSSGGARTVDLSFTSSDNFIAGEDGSAN 5613
Query: 499 FGSDRGAAARHYIT---------HGVKEGRNPDAFKALEYIASHEDLINAFADAPD---- 545
+ A + G L + ++ L
Sbjct: 5614 AITGGSARDLIFGGGHDDFLSGGEGSDLLIGGGGNDLLAGGSGNDTLRGGAGADTFELSN 5673
Query: 546 LVQAGKDHFSNFGYEEGRSITFNPDLYLT 574
+ D ++ EG ++ + L
Sbjct: 5674 TGSSNFDTILDYSSAEGDTLDLSALLDAA 5702
>gi|11762054|gb|AAG40305.1|AF314521_1 leukotoxin [Mannheimia glucosida]
Length = 946
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/331 (14%), Positives = 100/331 (30%), Gaps = 28/331 (8%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
AD L++ + T + F L P + R G++ + L
Sbjct: 500 ADKLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITKLNINRV 559
Query: 74 SI------HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F +N D+ + + V + G G + + E
Sbjct: 560 DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIVAKLGAGDDNVFVGSGTTE 619
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
I G G Y +D E + +V + + T +V +
Sbjct: 620 IDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VETGKALHEVTSTHTALVGN 677
Query: 188 IVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++ + + G Y + K ++ I + +D+ +
Sbjct: 678 REEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFN--------- 722
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + TI + + + G G+D++ G + ++ GND+ G G D
Sbjct: 723 ----DAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDI 778
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
F + I + + ++ + +D
Sbjct: 779 FVHRQGDGNDIITDSDGNDKLSFSDSNLKDL 809
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 62/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I +G+D V
Sbjct: 564 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-VAKLGAGDDNVF 612
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 613 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKALHEVTSTHT 672
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L VE + K +
Sbjct: 673 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVD 732
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 733 TIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRQGD 785
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + D L + S+
Sbjct: 786 GNDIITDSDGNDKLSFSDSN 805
>gi|11762064|gb|AAG40310.1|AF314526_1 leukotoxin [Bibersteinia trehalosi]
Length = 955
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 22/228 (9%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
G G + + EI G G Y +D E + +V + +
Sbjct: 612 TLGDGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VES 669
Query: 171 SMMDASFGYCATPMVSDIVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
T +V + ++ + + G Y + K ++ I + +D
Sbjct: 670 GKALHEVTSTHTALVGNREEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHND 723
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + + G + TI + + + G G+D++ G + ++
Sbjct: 724 IFKGSKFN-------------DAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFI 770
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
GND+ G G D F + I E + ++ + +D
Sbjct: 771 DGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDL 818
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 47/212 (22%), Gaps = 48/212 (22%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIV------ 327
V ++ F SG DG G D Y +Y + V
Sbjct: 610 VATLGDGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVES 669
Query: 328 ------------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ A + +D L VE + K
Sbjct: 670 GKALHEVTSTHTALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSK 729
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ + G D K G D ++ G +DL +
Sbjct: 730 FNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKG 784
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
D H G + L + S+
Sbjct: 785 DDI--FVHRQGDGNDSITESEGNDKLSFSDSN 814
>gi|73620926|sp|P55117|LKTA_PASTR RecName: Full=Leukotoxin; Short=Lkt
gi|11762058|gb|AAG40307.1|AF314523_1 leukotoxin [Bibersteinia trehalosi]
gi|11762060|gb|AAG40308.1|AF314524_1 leukotoxin [Bibersteinia trehalosi]
gi|11762062|gb|AAG40309.1|AF314525_1 leukotoxin [Bibersteinia trehalosi]
Length = 955
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 22/228 (9%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
G G + + EI G G Y +D E + +V + +
Sbjct: 612 TLGDGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VES 669
Query: 171 SMMDASFGYCATPMVSDIVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
T +V + ++ + + G Y + K ++ I + +D
Sbjct: 670 GKALHEVTSTHTALVGNREEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHND 723
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + + G + TI + + + G G+D++ G + ++
Sbjct: 724 IFKGSKFN-------------DAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFI 770
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
GND+ G G D F + I E + ++ + +D
Sbjct: 771 DGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDL 818
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 47/212 (22%), Gaps = 48/212 (22%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIV------ 327
V ++ F SG DG G D Y +Y + V
Sbjct: 610 VATLGDGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVES 669
Query: 328 ------------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ A + +D L VE + K
Sbjct: 670 GKALHEVTSTHTALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSK 729
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ + G D K G D ++ G +DL +
Sbjct: 730 FNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKG 784
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
D H G + L + S+
Sbjct: 785 DDI--FVHRQGDGNDSITESEGNDKLSFSDSN 814
>gi|73621151|sp|Q9EV31|LKA13_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762032|gb|AAG40294.1|AF314510_1 leukotoxin [Mannheimia haemolytica]
Length = 953
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 22/228 (9%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
G G + + EI G G Y +D E + +V + +
Sbjct: 610 TLGDGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VES 667
Query: 171 SMMDASFGYCATPMVSDIVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
T +V + ++ + + G Y + K ++ I + +D
Sbjct: 668 GKALHEVTSTHTALVGNREEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHND 721
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + + G + TI + + + G G+D++ G + ++
Sbjct: 722 IFKGSKFN-------------DAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFI 768
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
GND+ G G D F + I E + ++ + +D
Sbjct: 769 DGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDL 816
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 47/212 (22%), Gaps = 48/212 (22%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIV------ 327
V ++ F SG DG G D Y +Y + V
Sbjct: 608 VATLGDGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVES 667
Query: 328 ------------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ A + +D L VE + K
Sbjct: 668 GKALHEVTSTHTALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSK 727
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ + G D K G D ++ G +DL +
Sbjct: 728 FNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKG 782
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
D H G + L + S+
Sbjct: 783 DDI--FVHRQGDGNDSITESEGNDKLSFSDSN 812
>gi|332265538|ref|XP_003281776.1| PREDICTED: stromelysin-3 isoform 2 [Nomascus leucogenys]
Length = 354
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 56/165 (33%), Gaps = 49/165 (29%)
Query: 52 QEVAR----WALGEWSKVVDLTFEETSIH-SDIKFISSNN---------------GYVCT 91
QE R AL WS V LTF E +DI + +
Sbjct: 107 QEQVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFF 166
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
P+ +++FD + W G +GT L A HE GH LGL H
Sbjct: 167 PKTHRE--GDVHFDYDETWTIGDDQGTDLLQVAAHEFGHVLGLQHT-------------- 210
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+ ++MS F +F Y + D +Q +YG
Sbjct: 211 -----TAAKALMSAF--------YTFRYPLSLSPDDHRGIQHLYG 242
>gi|295690414|ref|YP_003594107.1| FG-GAP repeat-containing protein [Caulobacter segnis ATCC 21756]
gi|295432317|gb|ADG11489.1| FG-GAP repeat protein [Caulobacter segnis ATCC 21756]
Length = 687
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 4/135 (2%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G + + L G + + ++ G + T++ + + G +G+D + G
Sbjct: 387 GAEHITTHLSGDAGVSVSGGAAA-DALVGDARAETLSGQAGNDGLFGGAGDDTLNGGDGA 445
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA---NEHKQDFLSDVER 343
++ +G D DG + +D Y + Y I + V DA D L +VE
Sbjct: 446 DILVGGAGADRIDGGADVDEARYGGLASEYAIGVTASGWTVSDARANPRDGADTLINVEN 505
Query: 344 LRFADQCIDSVNVKQ 358
L FAD+ I +
Sbjct: 506 LVFADKTISLGDATV 520
>gi|11762050|gb|AAG40303.1|AF314519_1 leukotoxin [Mannheimia glucosida]
Length = 953
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 48/331 (14%), Positives = 100/331 (30%), Gaps = 28/331 (8%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
AD L++ + T + F L P + R G++ + L
Sbjct: 507 ADKLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITKLNINRV 566
Query: 74 SI------HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F +N D+ + + V + G G + + E
Sbjct: 567 DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIVAKLGAGDDNVFVGSGTTE 626
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
I G G Y +D E + +V + + T +V +
Sbjct: 627 IDGGEGYDRVHYSRGNYGALTIDATKETERGSYTVNRF--VETGKALHEVTSTHTALVGN 684
Query: 188 IVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++ + + G Y + K I+ I + +D+ +
Sbjct: 685 REEKIEYRHSNNQHHAG---YYTKDTLKA---IEEIIGTSHNDIFKGSKFN--------- 729
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + TI + + + G G+D++ G + ++ GND+ G G D
Sbjct: 730 ----DAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDI 785
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
F + I + + ++ + +D
Sbjct: 786 FVHRQGDGNDIITDSDGNDKLSFSDSNLKDL 816
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 62/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I +G+D V
Sbjct: 571 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-VAKLGAGDDNVF 619
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 620 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETERGSYTVNRFVETGKALHEVTSTHT 679
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L +E + K +
Sbjct: 680 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAIEEIIGTSHNDIFKGSKFNDAFNGGDGVD 739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 740 TIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRQGD 792
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + D L + S+
Sbjct: 793 GNDIITDSDGNDKLSFSDSN 812
>gi|222147144|ref|YP_002548101.1| Hemolysin-type calcium-binding protein [Agrobacterium vitis S4]
gi|221734134|gb|ACM35097.1| Hemolysin-type calcium-binding protein [Agrobacterium vitis S4]
Length = 833
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 67/201 (33%), Gaps = 11/201 (5%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G + Y TI G+D+L G N + SI G
Sbjct: 9 GNDTITGTSDY---DNLSGGLGDDTINGGAGNDVL----SGNGGNDAISGEDGSDSIRGG 61
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N +++ ++++ G +GND + G++ N+V +G D+ +G G DT Y + +
Sbjct: 62 SGNDSLSGGDGVDTLYGEAGNDSLSGDAGNDVLNGGAGADILNGGDGTDTVNYTSSDAIN 121
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
V + + D +E + + Q V +I + + + G
Sbjct: 122 INLATG----VASGGDAQGDTFVSIEVISASSQDDVLVGDDNDNIFKGGDGSDTIHGGDG 177
Query: 377 QDVFESMKHFYEFGLSEGRDI 397
D G D
Sbjct: 178 DDTLAGGFDADVINGGNGSDT 198
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 57/453 (12%), Positives = 100/453 (22%), Gaps = 64/453 (14%)
Query: 69 TFEETSIHSDIKFISS---------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
FE + F S + ++ I AD G G T
Sbjct: 368 NFENLTYTGTANFTGSGTVADNVMISGAGADYLFGNNGNDTLIGGAGADKLSGGGGNDTS 427
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
++ + L + E ++ ++
Sbjct: 428 SYRDSTSAVTVNLATGLAQGGFAQGDTFISIESLEGSAYNDTLTGNRESNTLRGGDGGDV 487
Query: 180 CATPMVSDIVAVQKIYGAPKGSL-----------GNNIY--------KIEVQQKDSPFIQ 220
SD + A +L G+ I
Sbjct: 488 LDGAAGSDTASYLDSTSAVTVNLQTRTLSGGYANGDTIISIENLEGSTYADSLTGDDQAN 547
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH---TVIESVVGSSGN 277
+ G D+LD NY D ++ + A+ IE+V GS
Sbjct: 548 VLTGRTGADILDGGAGSDTANYSDSTEGVIINLVTGQTAGGSAEGDVLVSIENVTGSGEA 607
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVY-- 328
D + GN +NV G+D G G D ++++ +
Sbjct: 608 DYLTGNDGSNVLSGGEGDDHLIGGGGDDLLNAGSGANILDGGDGSDTASYADSSVGISAS 667
Query: 329 ------DANEHKQDFLSDVERLRFADQCIDSVNVK------------------QRSILEY 364
+ D L +E L + L
Sbjct: 668 LSGDAGVGGSAEGDVLISIEALEGSFYADTLSGSGYADVLKGGEDADTLFGLEGDDSLHG 727
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ L G D + EG D+ S Y +
Sbjct: 728 DGGDDVLYADAGDDTLAGGEGDDALYGGEGSDVFVYSSNYGNDVIFDFDSSADTIDLTDM 787
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
+ T + + + S+ D +
Sbjct: 788 GFATVSDAAAYATEIEDGVLFTFSNVDTLTVHG 820
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 56/218 (25%), Gaps = 23/218 (10%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ I + +++ G+S D + G ++ +GNDV G+ G D I
Sbjct: 2 VYILGGSGNDTITGTSDYDNLSGGLGDDTINGGAGNDVLSGNGGND-----------AIS 50
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + + + L D L A + L G D+
Sbjct: 51 GEDGSDSIRGGSGND--------SLSGGDGVDTLYGEAGNDSLSGDAGNDVLNGGAGADI 102
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ I + + S D + D + + D
Sbjct: 103 LNGGDGTDTVNYTSSDAININLATGVASGGDAQ----GDTFVSIEVISASSQDDVLVGDD 158
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ D I+ L N G
Sbjct: 159 NDNIFKGGDGSDTIHGGDGDDTLAGGFDADVINGGNGS 196
Score = 45.2 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 62/242 (25%), Gaps = 6/242 (2%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
N L + N T + ++ +G D + GN+ N+ +G D
Sbjct: 357 TTGLNSYSLTRNFENLTYTGTANFTGSGTVADNVMISGAGADYLFGNNGNDTLIGGAGAD 416
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G G DT Y + + + + D +E L +
Sbjct: 417 KLSGGGGNDTSSYRDSTSAVTVNLATG---LAQGGFAQGDTFISIESLEGSAYNDTLTGN 473
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
++ + L + L G D + ++ + D + ++
Sbjct: 474 RESNTLRGGDGGDVLDGAAGSDTASYLDSTSAVTVNLQTRTL---SGGYANGDTIISIEN 530
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ A + + D N ++ + G
Sbjct: 531 LEGSTYADSLTGDDQANVLTGRTGADILDGGAGSDTANYSDSTEGVIINLVTGQTAGGSA 590
Query: 477 EG 478
EG
Sbjct: 591 EG 592
>gi|119580008|gb|EAW59604.1| matrix metallopeptidase 11 (stromelysin 3), isoform CRA_b [Homo
sapiens]
gi|193786817|dbj|BAG52140.1| unnamed protein product [Homo sapiens]
Length = 354
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 56/165 (33%), Gaps = 49/165 (29%)
Query: 52 QEVAR----WALGEWSKVVDLTFEETSIH-SDIKFISSNN---------------GYVCT 91
QE R AL WS V LTF E +DI + +
Sbjct: 107 QEQVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFF 166
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
P+ +++FD + W G +GT L A HE GH LGL H
Sbjct: 167 PKTHRE--GDVHFDYDETWTIGDDQGTDLLQVAAHEFGHVLGLQHT-------------- 210
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+ ++MS F +F Y + D VQ +YG
Sbjct: 211 -----TAAKALMSAF--------YTFRYPLSLSPDDCRGVQHLYG 242
>gi|1702930|emb|CAA69913.1| matrix metalloproteinase [Homo sapiens]
Length = 508
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 51/162 (31%), Gaps = 38/162 (23%)
Query: 50 NAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF--------- 99
A+ R A +WS V LTF+E + +DI+
Sbjct: 124 TARAALRQAFQDWSNVAPLTFQEVQAGAADIRLSFHGRQSSYCSNTFDGPGRVLAHADIP 183
Query: 100 --MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
++FD+ + W G +G L A HE+GHALGL H
Sbjct: 184 ELGSVHFDEDEFWTEGTYRGVNLRIIAAHEVGHALGLGH--------------------- 222
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
Y + + + D+ +Q +YG
Sbjct: 223 -----SRYSQALMAPVYEGYRPHFKLHPDDVAGIQALYGKKS 259
>gi|83646618|ref|YP_435053.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis
KCTC 2396]
gi|83634661|gb|ABC30628.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis
KCTC 2396]
Length = 2095
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 49/397 (12%), Positives = 103/397 (25%), Gaps = 41/397 (10%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T + DV G K + + G G H + +G +
Sbjct: 558 NDTISGGAGSDQIYGHGGDDVIDGGADKD-YIWGDHDKLAGEFHGNDHIDAGDGEGQIII 616
Query: 149 VDNDYEND------SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+ + + +Y + +F TP D
Sbjct: 617 GGGGSDVILSGSGRDMIWADSTYDATSITSNGNTFVVPTTPQGLDEA------------- 663
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + + I G+D + G + + + G + I
Sbjct: 664 ----FHGDDEVHAGGGDDQILAGAGNDRI----YGDAGEDVIYGIAGNNYLDGGDDKDFI 715
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
I+ +VG +G D + GN ++ G D G G DT + E
Sbjct: 716 YGGVDIDHIVGGAGADTLYGNKGDDWLQGGLGGDFLYGDEGNDTL--DGGGEGDVLAGGE 773
Query: 323 NAIIVYDANEHKQDFLSDVERL-------RFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + D E + +A I+ + + + + Y A + ++ I
Sbjct: 774 GDDTYIVKRGYGVTHIKDEEGISTIKFADTYASSTINVIQGEDKVTIRYGAEGDAVVMSI 833
Query: 376 GQ--DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+ + E + + +D+ + + ++ Y G
Sbjct: 834 QTFKNAKLVLADTRGPATPEYDAAGSEGPVSGSLNNDVIDFSDKESDSSI--YAGEGNDI 891
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L + L + +G D +
Sbjct: 892 LYGGTGDDKLYGEGGDDTLDGGLGNDRLNGGLGADTY 928
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 47/150 (31%), Gaps = 16/150 (10%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTL--------------IGGVKNYIDLNTESWSSIGG 255
+ I +GG+D + + G N L E + G
Sbjct: 28 DDAISSKEGTNYISSNGGNDTVTGSNSGDYLSGGRGSDIIFGNNGNDCILGGEGIDHLYG 87
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ TI +++ G + +DV+ G S ++ SG D G SG DT
Sbjct: 88 GNGDDTIVGGNEDDTIEGGADSDVLHGQSGADILEGGSGRDFLYGGSGKDTL--NGGIGN 145
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLR 345
I + D++ D E L
Sbjct: 146 DYIEGGADNDTYVYTKGDGADYIVDTEGLN 175
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 57/186 (30%), Gaps = 21/186 (11%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
P + S G D + G + I + + I N T+ + + G
Sbjct: 3 SGGPLDEAPDQSSGTDS-GAIIGGESDDAISSKEGT-NYISSNGGNDTVTGSNSGDYLSG 60
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G+D++ GN+ N+ G D G +G DT + I ++ +++ +
Sbjct: 61 GRGSDIIFGNNGNDCILGGEGIDHLYGGNGDDTIV--GGNEDDTIEGGADSDVLHGQS-- 116
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
R L + + L IG D E + ++
Sbjct: 117 ---------------GADILEGGSGRDFLYGGSGKDTLNGGIGNDYIEGGADNDTYVYTK 161
Query: 394 GRDITF 399
G +
Sbjct: 162 GDGADY 167
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 53/193 (27%), Gaps = 19/193 (9%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ T +++G +D + N + GND GS+ D + I+
Sbjct: 14 SSGTDSGAIIGGESDDAISSKEGTNYISSNGGNDTVTGSNSGD--YLSGGRGSDIIFGNN 71
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ ++ L + V + +E A + L G D+ E
Sbjct: 72 GNDCILGG--------EGIDHLYGGNGDDTIVGGNEDDTIEGGADSDVLHGQSGADILEG 123
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
GRD + + N + + T G D
Sbjct: 124 GS---------GRDFLYGGSGKDTLNGGIGNDYIEGGADNDTYVYTKGDGADYIVDTEGL 174
Query: 443 LEYIASHEDLINA 455
+ I + + +
Sbjct: 175 NKIILKNSESDSG 187
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/258 (12%), Positives = 72/258 (27%), Gaps = 23/258 (8%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH---- 136
S+ + + D G T+ + LG
Sbjct: 872 IDFSDKESDSSIYAGEGNDILYGGTGDDKLYGEGGDDTLDGGLGNDRLNGGLGADTYNVK 931
Query: 137 -PGSYNGGYPVYGVDNDYEN----DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G +N G D ++ N DS V++ ++ + + ++
Sbjct: 932 IVGGFNDIIDETGSDKNHLNITGVDSLDDLVVTNDREWGLVITTRQINARSLWLGNLPEH 991
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ G + + + + + + + + G +
Sbjct: 992 YHLEGITTYDI--TLPDFGLNLDSDAILDKLMEG---NSFSQIIRGNESANVITAEGGDD 1046
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ Y N + G SG D + G ++V + ND G +G D + Y +
Sbjct: 1047 NVHSYGGNDY---------LYGGSGQDYLNGGDDDDVIYGGRDNDELQGGNGDDVYVYQS 1097
Query: 312 PSYLYKIYRFENAIIVYD 329
+ I ++ + D
Sbjct: 1098 GDCVDTIILNKSGLGDKD 1115
Score = 50.6 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 39/358 (10%), Positives = 78/358 (21%), Gaps = 31/358 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ G D + + D E S+ ++ +
Sbjct: 442 GNDTLLGGKGNDYLSGGAGAD-IIFGGENDDHIHGDSRNEYRSNASSGSAQIS-NDDLLT 499
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E G S +DV+ G + + +G+DV DG G D +
Sbjct: 500 EVEEGVSYDDVLSGGKGADRIWGEAGSDVIDGGEGDDILW--------------GDRSQV 545
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
L + + +++ A + + D H +
Sbjct: 546 TGLPDLDPLLHGNDTISGGAGSDQIYGHGGDDVIDGGADKDYIWGD--HDKLAGEFHGND 603
Query: 389 F-----------GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
G D+ + D S + +
Sbjct: 604 HIDAGDGEGQIIIGGGGSDVILSGSGRDMIWADSTYDATSITSNGNTFVVPTTPQGLDEA 663
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ +D I A A + + D ++ D+ +
Sbjct: 664 FHGDDEVHAGGGDDQILAGAGNDRIYGDAGEDVIYGIAGNNYLDGGDDKDFIYGGVDIDH 723
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ G +G F L ++ L G D +
Sbjct: 724 IVGGAGADTLYGNKGDDWLQGGLGGDF--LYGDEGNDTLDGGGEGDVLAGGEGDDTYI 779
Score = 42.5 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 49/153 (32%), Gaps = 4/153 (2%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D+TL N +D + + G + I + + G+D V N
Sbjct: 996 GITTYDITLPDFGLN-LDSDAILDKLMEGNSFSQIIRGNESANVITAEGGDDNVHSYGGN 1054
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ + SG D +G D Y ++ + + D + + +
Sbjct: 1055 DYLYGGSGQDYLNGGDDDD--VIYGGRDNDELQGGNGDDVYVYQSGDCVDTII-LNKSGL 1111
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D+ I + + L ++ S DL D
Sbjct: 1112 GDKDILVIQGLSKHELWFSQSSADLTISKAGDP 1144
Score = 38.6 bits (88), Expect = 3.8, Method: Composition-based stats.
Identities = 45/381 (11%), Positives = 89/381 (23%), Gaps = 72/381 (18%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ AD G + + G G + G
Sbjct: 713 DFIYGGVDIDHIVGGAGADTLYGNKGDDWLQGGLGGDFLYGDEGNDTLDGGGEGDVLAGG 772
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA----VQKIYGAPKGSLGNN 205
+ D +++ ++ + F +++ V YGA ++ +
Sbjct: 773 EGDDTYIVKRGYGVTHIKDEEGISTIKFADTYASSTINVIQGEDKVTIRYGAEGDAVVMS 832
Query: 206 IYKI--------EVQQKDSPFIQT------IYDSGGDDLLDLT-------LIGGVKNYID 244
I + + +P + S +D++D + + G N I
Sbjct: 833 IQTFKNAKLVLADTRGPATPEYDAAGSEGPVSGSLNNDVIDFSDKESDSSIYAGEGNDIL 892
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV--VIGNSANNVFFESSGND----VF 298
+ G + T+ + + G G D V N + +G+D
Sbjct: 893 YGGTGDDKLYGEGGDDTLDGGLGNDRLNGGLGADTYNVKIVGGFNDIIDETGSDKNHLNI 952
Query: 299 DGSSGLDTFFYYAPS--YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA--------- 347
G LD L R NA ++ N + L +
Sbjct: 953 TGVDSLDDLVVTNDREWGLVITTRQINARSLWLGNLPEHYHLEGITTYDITLPDFGLNLD 1012
Query: 348 ------------------------------DQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + L + + L
Sbjct: 1013 SDAILDKLMEGNSFSQIIRGNESANVITAEGGDDNVHSYGGNDYLYGGSGQDYLNGGDDD 1072
Query: 378 DVFESMKHFYEFGLSEGRDIT 398
DV + E G D+
Sbjct: 1073 DVIYGGRDNDELQGGNGDDVY 1093
>gi|332561203|ref|ZP_08415521.1| Na-Ca exchanger/integrin-beta4 [Rhodobacter sphaeroides WS8N]
gi|332275001|gb|EGJ20317.1| Na-Ca exchanger/integrin-beta4 [Rhodobacter sphaeroides WS8N]
Length = 621
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 64/241 (26%), Gaps = 33/241 (13%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+D+ + I + S+ + A+ I G SGN+ + G +
Sbjct: 350 IDVAGTADGRFIISWTQGNGSASDNVMVRIIDAEGVFI---TGDSGNNRLAGTLGGDTLD 406
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-- 348
+ G D G+SG D + I + +++ERL
Sbjct: 407 GAGGADTLIGNSGNDIYI---TDGGDTIVEASGGGTDTVRSSASCTLGANLERLALTGTS 463
Query: 349 -----------------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
L A + LI G DV F
Sbjct: 464 AIVATGNRLDNVLTGNSAANTLAGNAGNDRLSGGAGADRLIGGTGNDVLAGGAGADTF-- 521
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
FD+ L L + D + + D + I + EG P + D
Sbjct: 522 ------VFDTALVLANRDRITDFRVIDDSIHLENAIFTRLSEGALPRNAFHASASGTAAD 575
Query: 452 L 452
Sbjct: 576 A 576
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 17/205 (8%)
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
A D + + + G D V + LG+ + + G+ A
Sbjct: 408 AGGADTLIGNSGNDIYITDGGDTIVEASGGGTDTVRSSASCTLGANLERLALTGTSAIVA 467
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHED---LINAFADAPDLVQAGKDHFSNFGYEEGR 563
G + A +A + L + G D G
Sbjct: 468 ------TGNRLDNVLTGNSAANTLAGNAGNDRLSGGAGADRLIGGTGND--VLAGGAGAD 519
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
+ F+ L L + D + + D S ++ I + EG + F + +
Sbjct: 520 TFVFDTALVLANRDRITDFRVIDDSIHLENAIFTRLSEGA---LPRNAFHASA---SGTA 573
Query: 624 DKADLSLSFDHKKVDLYTDYFGDGN 648
A + ++ L+ D G G+
Sbjct: 574 ADASDRILYETDTGRLFYDPDGTGS 598
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 58/154 (37%), Gaps = 10/154 (6%)
Query: 191 VQKIYGAPK--GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI---GGVKNYIDL 245
+ GA G+ GN+IY D GG D + + G + L
Sbjct: 405 LDGAGGADTLIGNSGNDIY-----ITDGGDTIVEASGGGTDTVRSSASCTLGANLERLAL 459
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
S G + + ++ ++ G++GND + G + + +GNDV G +G D
Sbjct: 460 TGTSAIVATGNRLDNVLTGNSAANTLAGNAGNDRLSGGAGADRLIGGTGNDVLAGGAGAD 519
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
TF + L R + ++ D+ + +
Sbjct: 520 TFVFDTALVLANRDRITDFRVIDDSIHLENAIFT 553
>gi|304391429|ref|ZP_07373371.1| putative Ig domain protein [Ahrensia sp. R2A130]
gi|303295658|gb|EFL90016.1| putative Ig domain protein [Ahrensia sp. R2A130]
Length = 4370
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 72/538 (13%), Positives = 146/538 (27%), Gaps = 54/538 (10%)
Query: 60 GEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
+S+ + +T + + + S+ TP +F+ D G G
Sbjct: 3016 ETFSRSITITVDGVTDSTINFVEGSSARDTFTPTTGDDFFVSGGNISNDEEFLFGGNGND 3075
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
+ + +G +D+ S + + + S+
Sbjct: 3076 ILIGSDAAVGERFDGGDGNDTIITGSNNASTSDFSAGSRGSDRYYFTGNGNGYQGISYAA 3135
Query: 180 CATPMVSDIVAVQKI--------------------------YGAPKGSLGNNIYKIEVQQ 213
+V+ I A +G + +
Sbjct: 3136 LTGGLVATISAATNTATIDKGAGEIDTIIDVAAAVYSGDGGFGLYGSAQTDTFNIDNGPI 3195
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIG--------------GVKNYIDLNTESWSSIG-GYEK 258
D + G+D+ ++ I+L+ S I G+
Sbjct: 3196 TDETQFMQVGGGRGNDVYNIISGNIRLDLRRDENFEQPETGVQINLSLGSNQIINDGFGG 3255
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA-PSYLYK 317
TI S+ + +D +IG++A+ F GNDV DG SG DT Y + +
Sbjct: 3256 TDTITGPGSFTSIRTTDLDDSIIGSAADEQFIARQGNDVIDGGSGFDTIRYDRLGAASVE 3315
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ N+ + + L+++E +R ++ + + LE + + G
Sbjct: 3316 LDLAANSSVGIWGDGQFNQTLTNIEGVRGSNIGVDTILGSTADNRLEGRGGTDIIDGRSG 3375
Query: 377 QDVFESMKHFYEF--GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
D F G D+ D + + G + +G
Sbjct: 3376 NDTLIGGSGGDVFIITSGSGVDVIEDFDPTTSGDRLVFDYSGINALGDFESVTLNGSDTL 3435
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ D + +++ F + G + L
Sbjct: 3436 IDIDGAGNTLLLQNYDLNGAPFPADFLVFSAEF-----GGTGDETLTGTAVSDALLGNGG 3490
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G D + G + L+ A ++ LI A L+ D
Sbjct: 3491 DDTLLGLDGDD----ILISGRGVQDFSTTGETLDGGAGNDLLIGGTFSAVRLIGGAGD 3544
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 67/480 (13%), Positives = 121/480 (25%), Gaps = 46/480 (9%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH----- 126
E D + + ++ D + G+ +
Sbjct: 3467 EFGGTGDETLTGTAVSDALLGNGGDDTLLGLDGDDILISGRGVQDFSTTGETLDGGAGND 3526
Query: 127 -EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD--ASFGYCATP 183
IG + G + + + +D+ F + + A+
Sbjct: 3527 LLIGGTFSAVRLIGGAGDDQLMAANVSFSDDATRWFEWVVFDYSNDPLGIIANLTSANYL 3586
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEV-----------QQKDSPFIQTIYDSGGDDLLD 232
V + G + IY S ++ SGGDD +D
Sbjct: 3587 GVVASSVLDGYGGTDSVTGVRTIYDTSSGDFFRIDGSLENSHSSNRVEVELSSGGDDTVD 3646
Query: 233 LTLIGGV---------KNYIDLNTESWSSIGGYEKNMTIAQH-TVIESVVGSSGNDVVIG 282
T ++L T S I N + T + GS DV+ G
Sbjct: 3647 FTGASRGRVAFTNASEGVSVNLATGIASDINASNGNQIGSNSITGATEIKGSDFGDVLTG 3706
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
N +N F G+D G +G+D+ +++ + V D +S +E
Sbjct: 3707 NGGDNQFQGRGGDDTITGGAGIDSISHWSARDFVTVDLSAATEQVSQDGFGGTDTVSGIE 3766
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDL-IQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ +L A + L +G V G+S G D +
Sbjct: 3767 NVNGGLSHDMITGQTNSQVLNGYAGNDVLRSGGLGGAVTLIGDEGSAAGVSGGNDTLIGA 3826
Query: 402 YL----YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK------ALEYIASHED 451
G D+ G + + +G D A +
Sbjct: 3827 DGLNVMIGGEGSDVFVFKLESTGDNRSNIEDFSLADGDLIDVSDFGVTSTADFNRFLYSA 3886
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY------LGSYDDLRNVFGSDRGA 505
+ + G + F G + D + +D G D
Sbjct: 3887 VEDLTIINVRSGGSGFEEFIVRGIDLTVLPNPDELFIFTRVDGIDGANDPITADGDDGTW 3946
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/257 (15%), Positives = 76/257 (29%), Gaps = 42/257 (16%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG-YEKNMTIAQ-------HTVIE 269
I G D + +G +DL S I G + N T+ + ++
Sbjct: 3291 GNDVIDGGSGFDTIRYDRLGAASVELDLAANSSVGIWGDGQFNQTLTNIEGVRGSNIGVD 3350
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII--- 326
+++GS+ ++ + G ++ SGND G SG D F + S + I F+
Sbjct: 3351 TILGSTADNRLEGRGGTDIIDGRSGNDTLIGGSGGDVFIITSGSGVDVIEDFDPTTSGDR 3410
Query: 327 -------VYDANEHKQDFLSDVERLRFADQCIDSV-----------------------NV 356
+ + + L+ + L D +++
Sbjct: 3411 LVFDYSGINALGDFESVTLNGSDTLIDIDGAGNTLLLQNYDLNGAPFPADFLVFSAEFGG 3470
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
L TA + L+ G D + G F + ++
Sbjct: 3471 TGDETLTGTAVSDALLGNGGDDTLLGLDGDDILISGRGVQ-DFSTTGETLDGGAGNDLLI 3529
Query: 417 SDRGAAARHYITHGVKE 433
+A R G +
Sbjct: 3530 GGTFSAVRLIGGAGDDQ 3546
Score = 42.5 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 39/130 (30%), Gaps = 3/130 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-YIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I G D + L+G +DL + + T I
Sbjct: 4125 DETFIGLGGDDNINGGAGIDRVRYDLVGDTSELDVDLTAGTADGAFDEDGFSHTL--TGI 4182
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E V GS +D++ G+S N G D G G D ++ I+
Sbjct: 4183 EWVTGSFNDDIIAGSSNNERLDGGGGADTISGQGGNDVITVADVAFTSVDGGTGQDILQL 4242
Query: 329 DANEHKQDFL 338
DA D
Sbjct: 4243 DAGGVFLDLA 4252
>gi|220926111|ref|YP_002501413.1| G-D-S-L family lipolytic protein [Methylobacterium nodulans ORS
2060]
gi|219950718|gb|ACL61110.1| lipolytic protein G-D-S-L family [Methylobacterium nodulans ORS
2060]
Length = 688
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 4/114 (3%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ + I G N + + G +G D + G + ++ + +D G +G DT +
Sbjct: 254 AVTDITGSTYNDLLTGDGRANHLTGGNGYDWLSGGAGDDQLDGGADDDTIVGGAGTDTAY 313
Query: 309 YYAPSYLYKIYRFENAII----VYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
Y Y I R + + D L VER +F DQ I V
Sbjct: 314 YVGNRSDYAITRLADGSYEVRDLRGGAPSGTDTLISVERAQFDDQTIQLDGVAG 367
>gi|329851855|ref|ZP_08266536.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328839704|gb|EGF89277.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1261
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 66/534 (12%), Positives = 139/534 (26%), Gaps = 54/534 (10%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + + + ++ V+ E S+ S N +
Sbjct: 618 DTFIVEASGDVVTEASSEGTDEVQSSITY---VLGDHVENLSLTGGASINGSGNSLINIL 674
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+S + AD G+G T + + + L + G + +
Sbjct: 675 TGNSGNNILTGGLGADSMAGGLGNDTFVVEDIGDVVTEGLDEGTDIVLASATFILGANIE 734
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ ++ ++ + + G
Sbjct: 735 NLTLTGTGAINGTGNALNNNLTGNSG-------------------------------NNV 763
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIG-------GVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ T+ G+D + + L++ +S G +N+T+
Sbjct: 764 LNGAAGNDTLTGGLGNDSYYVDSASDVVVEVASGGTDLILSSVHYSLAGIVVENLTL-TG 822
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ G+ + + GNS NNV ND G G DT++ A E +
Sbjct: 823 ADDLNGTGNGSGNALTGNSGNNVLDGGLANDTMAGGLGNDTYYVQATGDNVVEANGEGSD 882
Query: 326 IVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+++ + + VE L +++ + L A L G D
Sbjct: 883 VIFSSVTY-TLSGRIVEVLNLTGLADLNATGNSLANTLNGNAGANLLDGGGGNDTLSGGA 941
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
F ++ D+ +++ F G D +L
Sbjct: 942 GNDTFIVNVTADVAIEAFGEGTDIVQSLATFTLGANIENLVLTGIANINGTGNDLNNSLT 1001
Query: 445 YIASHEDLINAFADAPDLVQVGKDHF----SNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
+ L + G D + ++ E D +Y V
Sbjct: 1002 GTIGNNALDGGAGVDTMVGGQGNDTYYVDIASDAITEAAGEGTDLVYASVTYSLAGKVVE 1061
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ + G G + + + L + + G D +
Sbjct: 1062 NLTMTGTANLSATGNTLGNKLNGN------SGNNSLDGGAGNDTLMGGLGNDTY 1109
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 62/391 (15%), Positives = 112/391 (28%), Gaps = 21/391 (5%)
Query: 199 KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTES 249
G+ G+N + + +++ S G+D D+ + +
Sbjct: 504 TGNSGDNSVVGNIGNNRLDGAEGNNSLFGSAGNDTYVVATVNDIVAEAPGDGTDTVESTI 563
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S+ +N+++ + I + G+SG ++++GNS NNV +G+D G G DTF
Sbjct: 564 SYSLAADLENLSLMETADI-NGTGNSGTNLIVGNSGNNVLDGGAGDDSLAGGLGNDTFIV 622
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTASY 368
A + + + VE L I+ +IL +
Sbjct: 623 EAS--GDVVTEASSEGTDEVQSSITYVLGDHVENLSLTGGASINGSGNSLINILTGNSGN 680
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
L +G D F + + D+ + F
Sbjct: 681 NILTGGLGADSMAGGLGNDTFVVEDIGDVVTEGLDEGTDIVLASATFILGANIENLTLTG 740
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE----EGRFVTFD 484
G G L + + L A + +G D + E D
Sbjct: 741 TGAINGTGNALNNNLTGNSGNNVLNGAAGNDTLTGGLGNDSYYVDSASDVVVEVASGGTD 800
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS---HEDLINAFA 541
L Y V + A G G + ++ +
Sbjct: 801 LILSSVHYSLAGIVVENLTLTGADDLNGTGNGSGNALTGNSGNNVLDGGLANDTMAGGLG 860
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPDLY 572
+ VQA D+ EG + F+ Y
Sbjct: 861 NDTYYVQATGDNVVEANG-EGSDVIFSSVTY 890
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 78/625 (12%), Positives = 150/625 (24%), Gaps = 46/625 (7%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + + +TE + + ++ W+ +L E ++ + + N
Sbjct: 294 DTFVVNAIGDGVTEAAGEGADTVQSSV-SWALGSNL--ENLTLTGNANINGTGNVGDNVV 350
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+S M D D G+G T N V
Sbjct: 351 FGNSGNNMLDGGDGNDTLNGGLGDDTFF-------------------INAIGDVVAETAS 391
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+D S++S+ + D G ++ I + L +
Sbjct: 392 AGSDEVR-SLVSWTLAVDLENLTLTGSANISGTGNVANNVIIGNSGNNLLDGGGGDDSLN 450
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ +G + DL S S + T
Sbjct: 451 AGLGDDSYIVDAAGDLVTEAVAEGT------DLVVASTSYVLSANIENLTLGGTGNIDGT 504
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+SG++ V+GN NN + GN+ GS+G DT+ + + +
Sbjct: 505 GNSGDNSVVGNIGNNRLDGAEGNNSLFGSAGNDTYVV--ATVNDIVAEAPGDGTDTVEST 562
Query: 333 HKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+D+E L I+ +++ + L G D F +
Sbjct: 563 ISYSLAADLENLSLMETADINGTGNSGTNLIVGNSGNNVLDGGAGDDSLAGGLGNDTFIV 622
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
D+ ++ + G L + +
Sbjct: 623 EASGDVVTEASSEGTDEVQSSITYVLGDHVENLSLTGGASINGSGNSLINILTGNSGNNI 682
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
L +G D F + D + F
Sbjct: 683 LTGGLGADSMAGGLGNDTFVVEDIGDVVTEGLDEGTDIVLAS---ATFILGANIENLTLT 739
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF--------SNFGYEEGR 563
G G L + + L A + G D + G
Sbjct: 740 GTGAINGTGNALNNNLTGNSGNNVLNGAAGNDTLTGGLGNDSYYVDSASDVVVEVASGGT 799
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
+ + Y + + N+ + G G SG ++
Sbjct: 800 DLILSSVHYSLAGIVVENLTLTGADDLNGTGNGSG---NALTGNSGNNVLDGGLANDTMA 856
Query: 624 DKADLSLSFDHKKVDLYTDYFGDGN 648
+ D + G+G+
Sbjct: 857 GGLGNDTYYVQATGDNVVEANGEGS 881
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/369 (15%), Positives = 101/369 (27%), Gaps = 36/369 (9%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT----- 266
+Y G+DLL+ N ++IA T
Sbjct: 18 TLTGGTAGDYLYGGTGNDLLNGGAGSDNLIGDSGNDTVSYVGAASGITVSIAISTSQNTG 77
Query: 267 --------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
E+V GS+ D + G+S N+ +GND G+ G DT+ S +
Sbjct: 78 GSGFDTLSGFENVTGSAYADSLTGSSGGNIIDGGAGNDTLAGAQGNDTYVVD--SGSDVL 135
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ ++VE L ++ + + S+ L G D
Sbjct: 136 VEAAASGTDVVQAFASFTLNANVENLVLLGASLNGTGNSLDNTITGNTSHNLLDGGAGND 195
Query: 379 VFESMKHFYEF-----------GLSEGRDITFDSYLY-LGSYDDLRNVFGSDRGAAARHY 426
+ EG D S Y LG+ + ++ GS + +
Sbjct: 196 TLSGGLGDDSYVVDAAGDVVTESGGEGTDTVSSSVTYVLGATLENLSLTGSANISGTGNV 255
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLI------NAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ + + N + L + + D +V D + E
Sbjct: 256 LNNSLTGNSNNNVLDGLAGNDLLDGGLGDDTLNGGLGDDTFVVNAIGDGVTEAAGEGADT 315
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
V LGS + + G+ G L+ ++ L
Sbjct: 316 VQSSVSWALGSNLENLTLTGNANINGT---GNVGDNVVFGNSGNNMLDGGDGNDTLNGGL 372
Query: 541 ADAPDLVQA 549
D + A
Sbjct: 373 GDDTFFINA 381
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/305 (13%), Positives = 81/305 (26%), Gaps = 16/305 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
++ N T ++ + D G G T + + A G
Sbjct: 903 TGLADLNATGNSLANTLNGNAGANLLDGGGGNDTLSGGAGNDTFIVNVTADVAIEAFGEG 962
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G + + + + ++ ++ + + G A+
Sbjct: 963 TDIVQSLATFTLGANIENLVLTGIANINGTGNDLNNSLTGTIGNN---------ALDGGA 1013
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G V + + +T K +L
Sbjct: 1014 GVDTMVGGQGNDTYYVDIASDAITEAAGEGTDLVYASVTYSLAGKVVENLT-------MT 1066
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N++ +T+ + G+SGN+ + G + N+ GND + +S D
Sbjct: 1067 GTANLSATGNTLGNKLNGNSGNNSLDGGAGNDTLMGGLGNDTYYVTSTGDKVVENNGEGT 1126
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
IY + E + S + + L + L +
Sbjct: 1127 DIIYSTVTYTLTGRYAETLELTGSGNVDASGNGVGNTLIGNTGNNTLNGLGGNDILTGGL 1186
Query: 376 GQDVF 380
G DVF
Sbjct: 1187 GADVF 1191
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 61/486 (12%), Positives = 129/486 (26%), Gaps = 50/486 (10%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ + Y + S + D G T + + + A G
Sbjct: 91 TGSAYADSLTGSSGGNIIDGGAGNDTLAGAQGNDTYVVDSGSDVLVEA--------AASG 142
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
V + ++ + +++ + ++ +++ G LG
Sbjct: 143 TDVVQAFASFTLNANVENLVLLGASLNGTGNSLDNTITGNTSHNLLDGGAGNDTLSGGLG 202
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
++ Y ++ + + T G D + ++ L + N++
Sbjct: 203 DDSYVVD----AAGDVVTESGGEGTDTVSSSVTYV------LGATLENLSLTGSANISGT 252
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + S+ G+S N+V+ G + N++ G+D +G G DTF A +
Sbjct: 253 GNVLNNSLTGNSNNNVLDGLAGNDLLDGGLGDDTLNGGLGDDTFVVNAI--GDGVTEAAG 310
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ S++E L + + G ++ +
Sbjct: 311 EGADTVQSSVSWALGSNLENLTLTGNANINGTGNV--------GDNVVFGNSGNNMLDGG 362
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D F +G GSD + + E L
Sbjct: 363 DGNDTLNGGLGDDTFF--INAIGDVVAETASAGSDEVRSLVSWTLAVDLENL------TL 414
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN---VFG 500
A+ N + G + D + + DL G
Sbjct: 415 TGSANISGTGNVANNVIIGNSGNNLLDGGGGDDSLNAGLGDDSYIVDAAGDLVTEAVAEG 474
Query: 501 SDRGAAARHYITHGVKEGRNPDAF-----------KALEYIASHEDLINAFADAPDLVQA 549
+D A+ Y+ E ++ + L A + A
Sbjct: 475 TDLVVASTSYVLSANIENLTLGGTGNIDGTGNSGDNSVVGNIGNNRLDGAEGNNSLFGSA 534
Query: 550 GKDHFS 555
G D +
Sbjct: 535 GNDTYV 540
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 43/369 (11%), Positives = 87/369 (23%), Gaps = 40/369 (10%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
+LL ++ + ++ D+ +L ++ ++ E
Sbjct: 922 NAGANLLDGGGGNDTLSGGAGNDTFIVNVTADVAIEAFGEGTDIVQSLATFTLGANI--E 979
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ + N + D G G T A I A
Sbjct: 980 NLVLTGIANINGTGNDLNNSLTGTIGNNALDGGAGVDTMVGGQGNDTYYVDIASDAITEA 1039
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G Y + + +T + +++ + G
Sbjct: 1040 AG--EGTDLVYASVTYSLAGKVVENLTMTGTANLSATGNTLGNKLNGNS----------- 1086
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
T+ G+D +T G K + +
Sbjct: 1087 -----------------GNNSLDGGAGNDTLMGGLGNDTYYVTS-TGDKVVENNGEGTDI 1128
Query: 252 SIGGYEKNMTIAQ-------HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+T + G+ + +IGN+ NN GND+ G G
Sbjct: 1129 IYSTVTYTLTGRYAETLELTGSGNVDASGNGVGNTLIGNTGNNTLNGLGGNDILTGGLGA 1188
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D F + S + F A +++ + I
Sbjct: 1189 DVFLFGIASRADTVTDFSAAQNDTINVNAYTGGVANNGLVVQVGADTVINFGGGNVITVL 1248
Query: 365 TASYEDLIQ 373
A+ D++
Sbjct: 1249 NATQADVLA 1257
>gi|209966566|ref|YP_002299481.1| integrins alpha chain, putative [Rhodospirillum centenum SW]
gi|209960032|gb|ACJ00669.1| integrins alpha chain, putative [Rhodospirillum centenum SW]
Length = 630
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 4/135 (2%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG + + G + + + T + + G G D++ G + ++F G+D
Sbjct: 18 GGSGRDLIRGLGGNDILKGRDGDDALYGGTGDDRLYGGRGQDLLAGGAGYDLFLGGIGDD 77
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN----EHKQDFLSDVERLRFADQCID 352
DG G D ++ ++ YR E + V D + + D L +E+LRF D +D
Sbjct: 78 TLDGGEGWDKAYWDGEFREFEFYRVEGWLYVVDTSSRFTDEGTDRLRGIEQLRFRDFGLD 137
Query: 353 SVNVKQRSILEYTAS 367
+Q + L A
Sbjct: 138 LTRTRQVADLSGDAG 152
Score = 40.2 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 40/155 (25%), Gaps = 29/155 (18%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+G V G + N + SG D+ G G D +Y
Sbjct: 2 AGWTVRQGTARNEIIEGGSGRDLIRGLGGNDIL--KGRDGDDALYGGTG----------- 48
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL-SE 393
+ + +L A Y+ + IG D + + + + E
Sbjct: 49 ---------------DDRLYGGRGQDLLAGGAGYDLFLGGIGDDTLDGGEGWDKAYWDGE 93
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
R+ F D + F + R
Sbjct: 94 FREFEFYRVEGWLYVVDTSSRFTDEGTDRLRGIEQ 128
>gi|83648752|ref|YP_437187.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
gi|83636795|gb|ABC32762.1| RTX toxins and related Ca2+-binding protein [Hahella chejuensis KCTC
2396]
Length = 1361
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 70/459 (15%), Positives = 127/459 (27%), Gaps = 83/459 (18%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL--HEIGHALG 133
D + + + ADV+ + +G G L HN H + + L
Sbjct: 598 GGDGDDMLVGGLGADVLHGGAGNDVLNGERGADVFEFNLGDGQDLIHNYDDDHSLVNRLK 657
Query: 134 LMHPGS-YNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSMMDASFGYCATPMVS-DIV 189
L + + +G D + V +++ + T M+ D++
Sbjct: 658 LGAGIKKEDLSFTRHGEDLVITIGTGGEQVRMKNHYSSRVEYQVEEIEIAGTAMLLQDLL 717
Query: 190 AVQ---KIYGAPKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
Q KI G +G+ + +Y + + + GGDD L +GG +
Sbjct: 718 KEQSEVKIAGLTEGN--DTVYGTHERNRMEGLGGNDILMAQGGDDEL----LGGAGDDTL 771
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ G E N + + ++G +G+DV++G +V +GNDV +G G
Sbjct: 772 KGELGDDRLEGGEGNDRLEGGNGDDVLLGGAGDDVLVGGMGADVLHGGAGNDVLNGERGA 831
Query: 305 DTFFYYAPSYLYKIYRFE-----------------------------------NAIIVYD 329
D F + I+ ++ V
Sbjct: 832 DVFEFNLGDGQDLIHNYDDDHSLVNRLKLGAGIKKEDLSFARHGEDLVITIGTGGEQVTM 891
Query: 330 ANEHKQDFLSDVERLRFAD----------------------QCIDSVNVKQRSILEYTAS 367
+ + + VE + A + +R+ +E
Sbjct: 892 KSHYSRRVEYQVEEIEIAGTAMLLQDLLKEQSEVKIAGLTEGNDVAYGTNERNRMEGLGG 951
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ LI G D G D L G +D D
Sbjct: 952 NDILIGEGGDDELLGGAGDDTLNGGLG-----DDRLEGGEGNDRLEGKEGDDVLL----G 1002
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
G L A ++ L +G
Sbjct: 1003 GAGDDVLVGGMGADVLHGGAGNDVLNGERGADVFEFNLG 1041
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 65/476 (13%), Positives = 132/476 (27%), Gaps = 60/476 (12%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ + D G G T+ + G NG + G D
Sbjct: 748 GGNDILMAQGGDDELLGGAGDDTLKGELGDDRLEGGEGNDRLEGGNGDDVLLGGAGDDVL 807
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCAT-PMVSDIVAVQKIY-----GAPKGSLGNNIYKI 209
+ + + + + +++ G + D + Y + LG I K
Sbjct: 808 VGGMGADVLHGGAGNDVLNGERGADVFEFNLGDGQDLIHNYDDDHSLVNRLKLGAGIKKE 867
Query: 210 E-VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY------IDLNTESWSSIGGYEKNMTI 262
+ + + +GG+ + + Y I + + + I
Sbjct: 868 DLSFARHGEDLVITIGTGGEQVTMKSHYSRRVEYQVEEIEIAGTAMLLQDLLKEQSEVKI 927
Query: 263 AQHT-VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
A T + G++ + + G N++ G+D G +G DT ++
Sbjct: 928 AGLTEGNDVAYGTNERNRMEGLGGNDILIGEGGDDELLGGAGDDTL--NGGLGDDRLEGG 985
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
E RL + + +L + L G DV
Sbjct: 986 EGND-----------------RLEGKEGDDVLLGGAGDDVLVGGMGADVLHGGAGNDVLN 1028
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ F + G DL + + D R + G+K+ +
Sbjct: 1029 GERGADVFEFNLG------------DGQDLIHNYDDDHSLVNRLKLGAGIKK-------E 1069
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL-----YLGSYDDLR 496
L + EDL+ + V + K+H+S + + + L +++
Sbjct: 1070 DLSFTRHGEDLVITIGTGGEQVTM-KNHYSRRVEYQVEEIEIEGTAMLLQDLLKEQSEVK 1128
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
++ A Y T+ L ++L+ D G D
Sbjct: 1129 IAGLTEGNDVA--YGTNERNRMEGLGGNDILIGEGGDDELLGGAGDDTLNGGLGDD 1182
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/329 (13%), Positives = 89/329 (27%), Gaps = 38/329 (11%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+ I D G G T+ + G G + G D
Sbjct: 950 GGNDILIGEGGDDELLGGAGDDTLNGGLGDDRLEGGEGNDRLEGKEGDDVLLGGAGDDVL 1009
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCAT-PMVSDIVAVQKIY-----GAPKGSLGNNIYKI 209
+ + + + + +++ G + D + Y + LG I K
Sbjct: 1010 VGGMGADVLHGGAGNDVLNGERGADVFEFNLGDGQDLIHNYDDDHSLVNRLKLGAGIKKE 1069
Query: 210 E--VQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + + TI G + + I+ + + + I
Sbjct: 1070 DLSFTRHGEDLVITIGTGGEQVTMKNHYSRRVEYQVEEIEIEGTAMLLQDLLKEQSEVKI 1129
Query: 263 AQHT-VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
A T + G++ + + G N++ G+D G +G DT ++
Sbjct: 1130 AGLTEGNDVAYGTNERNRMEGLGGNDILIGEGGDDELLGGAGDDTL--NGGLGDDRLEGG 1187
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
E RL + + +L + L G DV
Sbjct: 1188 EGND-----------------RLEGKEGDDVLLGGAGDDVLVGGMGADILHGGAGNDVLN 1230
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ F + G D + +YDD
Sbjct: 1231 GERGADVFEFNLG-----DGQDQIHNYDD 1254
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 68/502 (13%), Positives = 144/502 (28%), Gaps = 72/502 (14%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL--GLMHPGSYNGGYPV 146
+ + ADV+ + +G G L HN + H+L L
Sbjct: 813 ADVLHGGAGNDVLNGERGADVFEFNLGDGQDLIHNYDDD--HSLVNRLKLGAGIKKEDLS 870
Query: 147 YGVDNDYENDSFLT-----SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ + + T ++ S++ + T M+ +Q +
Sbjct: 871 FARHGEDLVITIGTGGEQVTMKSHYSRRVEYQVEEIEIAGTAML-----LQDLLKEQSEV 925
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + + + GG+D+L G + L ++ G +
Sbjct: 926 KIAGLTEGNDVAYGTNERNRMEGLGGNDILI----GEGGDDELLGGAGDDTLNGGLGDDR 981
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G G+DV++G + ++V G DV G +G D + +++
Sbjct: 982 LEGGEGNDRLEGKEGDDVLLGGAGDDVLVGGMGADVLHGGAGNDVLNGERGADVFEFNLG 1041
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ ++++ ++ + ++ L +T EDL+ IG +
Sbjct: 1042 DGQDLIHNYDDDHSLVNR-----------LKLGAGIKKEDLSFTRHGEDLVITIGTGGEQ 1090
Query: 382 S--MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
H+ R + + L ++ +T G +
Sbjct: 1091 VTMKNHYSR------RVEYQVEEIEIEGTAMLLQDLLKEQSEVKIAGLTEGNDVAYGTNE 1144
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
+E + ++ LI D L G D + ++
Sbjct: 1145 RNRMEGLGGNDILIGEGGDDELLGGAGDDTLNGGLGDDRLEGG----------------- 1187
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
+ EG+ D L A + L+ AG D G
Sbjct: 1188 -----------EGNDRLEGKEGD--DVLLGGAGDDVLVGGMGADILHGGAGND--VLNGE 1232
Query: 560 EEGRSITF---NPDLYLTSYDD 578
F + + +YDD
Sbjct: 1233 RGADVFEFNLGDGQDQIHNYDD 1254
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/315 (13%), Positives = 89/315 (28%), Gaps = 40/315 (12%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ + ++ + G N + + ++G G+D+++G +V +GNDV
Sbjct: 563 SDADTTEKGDSGFNILIGLAGNDRLEGGNGDDVLLGGDGDDMLVGGLGADVLHGGAGNDV 622
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+G G D F + I+ +++ + + +
Sbjct: 623 LNGERGADVFEFNLGDGQDLIHNYDDDHSLVNR--------------------LKLGAGI 662
Query: 358 QRSILEYTASYEDLIQVIGQDVFES--MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
++ L +T EDL+ IG + H+ R + + L
Sbjct: 663 KKEDLSFTRHGEDLVITIGTGGEQVRMKNHYSS------RVEYQVEEIEIAGTAMLLQDL 716
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
++ +T G +E + ++ L+ D L G D
Sbjct: 717 LKEQSEVKIAGLTEGNDTVYGTHERNRMEGLGGNDILMAQGGDDELLGGAGDDTLKGELG 776
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
++ + G D + G+ G L A ++
Sbjct: 777 DDRLEGGEGNDRLEGGNGDDVLLGGA------------GDDVLVGGMGADVLHGGAGNDV 824
Query: 536 LINAFADAPDLVQAG 550
L G
Sbjct: 825 LNGERGADVFEFNLG 839
Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/257 (16%), Positives = 91/257 (35%), Gaps = 17/257 (6%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL--GLMHPGSYNGGYPV 146
+ + ADV+ + +G G L HN + H+L L
Sbjct: 1015 ADVLHGGAGNDVLNGERGADVFEFNLGDGQDLIHNYDDD--HSLVNRLKLGAGIKKEDLS 1072
Query: 147 YGVDNDYENDSFLT-----SVMSYFMPQDSMMDASFGYCATPMVS-DIVAVQKIYGAPKG 200
+ + + T ++ +++ + T M+ D++ Q
Sbjct: 1073 FTRHGEDLVITIGTGGEQVTMKNHYSRRVEYQVEEIEIEGTAMLLQDLLKEQSEVKIAGL 1132
Query: 201 SLGNNI-YKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ GN++ Y + + + GGDD L +GG + + G E
Sbjct: 1133 TEGNDVAYGTNERNRMEGLGGNDILIGEGGDDEL----LGGAGDDTLNGGLGDDRLEGGE 1188
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N + + ++G +G+DV++G ++ +GNDV +G G D F + +
Sbjct: 1189 GNDRLEGKEGDDVLLGGAGDDVLVGGMGADILHGGAGNDVLNGERGADVFEFNLGDGQDQ 1248
Query: 318 IYRFENAIIVYDANEHK 334
I+ +++ + +
Sbjct: 1249 IHNYDDDHSLTNRLNLG 1265
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/291 (16%), Positives = 83/291 (28%), Gaps = 46/291 (15%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++V G+ + + G N++ G+D G +G DT
Sbjct: 731 GNDTVYGTHERNRMEGLGGNDILMAQGGDDELLGGAGDDTL------------------- 771
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
E D L E +L A + L+ +G DV
Sbjct: 772 ---KGELGDDRLEGGE------GNDRLEGGNGDDVLLGGAGDDVLVGGMGADVLHGGAGN 822
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G D+ LG DL + + D R + G+K+ + L +
Sbjct: 823 DVLNGERGADV---FEFNLGDGQDLIHNYDDDHSLVNRLKLGAGIKK-------EDLSFA 872
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL-----YLGSYDDLRNVFGS 501
EDL+ + V + K H+S + + L +++ +
Sbjct: 873 RHGEDLVITIGTGGEQVTM-KSHYSRRVEYQVEEIEIAGTAMLLQDLLKEQSEVKIAGLT 931
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ A Y T+ L ++L+ D G D
Sbjct: 932 EGNDVA--YGTNERNRMEGLGGNDILIGEGGDDELLGGAGDDTLNGGLGDD 980
>gi|238797466|ref|ZP_04640965.1| serine protease [Yersinia mollaretii ATCC 43969]
gi|238718737|gb|EEQ10554.1| serine protease [Yersinia mollaretii ATCC 43969]
Length = 1817
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 69/195 (35%), Gaps = 15/195 (7%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN--MTIAQHTVIE 269
K T+ GG+D+L G KN+I + G + + Q ++I
Sbjct: 668 FIKGGNGNSTLVGGGGNDVL---SGGRGKNHIVGGSGKAVIYAGPQGDNIYASEQGSIIH 724
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
G D + GN N+V G+ + DG G++ + Y + R EN V D
Sbjct: 725 ---AGGGVDRIFGNKRNDVIVAGKGDALIDGGGGINVVVLHGSYADYTLTRTENGYQVKD 781
Query: 330 --ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
A L ++++L FAD + L + LI G + S
Sbjct: 782 KVAGRDGTLTLKNIQKLDFADISAVDLGANTIIPL-----NDILIYGDGSPISRSQNTRI 836
Query: 388 EFGLSEGRDITFDSY 402
G D F++
Sbjct: 837 PAQAVLGNDFRFNTE 851
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 48/156 (30%), Gaps = 8/156 (5%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G + +D + + A + G++ + G +G D F A I V
Sbjct: 573 NIYGGNQDDTLTASKAGSWLAGRGGSNTYKGGAGNDVFVISASDVPSHIQGNGGRDTVLI 632
Query: 330 ANEHKQDFL---SDVERLRFADQCIDSVNVKQRSIL-EYTASYEDLIQVIGQDVFESMKH 385
+ + S + + D V+ R + + L+ G DV +
Sbjct: 633 SGDKGVALNMARSGITLAQGGDGDDIIVSGGDRGVFIKGGNGNSTLVGGGGNDVLSGGRG 692
Query: 386 FYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGS 417
G+ + + +Y + + G
Sbjct: 693 KNHIVGGSGKAVIYAGPQGDNIYASEQGSIIHAGGG 728
Score = 44.8 bits (104), Expect = 0.046, Method: Composition-based stats.
Identities = 26/213 (12%), Positives = 58/213 (27%), Gaps = 37/213 (17%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+ L+ N I ++ + +A + G +GNDV + ++++
Sbjct: 558 GNKKASLSADELAVNNI-YGGNQDDTLTASKAGSWLAGRGGSNTYKGGAGNDVFVISASD 616
Query: 287 --NVFFESSGNDVF--------------------DGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G D G G D ++ N+
Sbjct: 617 VPSHIQGNGGRDTVLISGDKGVALNMARSGITLAQGGDGDDIIVSGGDRGVFIKGGNGNS 676
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+V D LS V ++++ +++ + +
Sbjct: 677 TLV---GGGGNDVLSG------GRGKNHIVGGSGKAVIYAGPQGDNIYASEQGSIIHAGG 727
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
++ D+ G D L + G
Sbjct: 728 GVDRIFGNKRNDVI-----VAGKGDALIDGGGG 755
Score = 44.0 bits (102), Expect = 0.087, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 13/115 (11%)
Query: 204 NNIYKIEV--------QQKDSPFIQTIYD-SGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
++ Y + I +GG + L++ I G +L T S G
Sbjct: 1414 DDTYFYTDEFATLVKKSPTRASLHDAIDGVAGGRNTLNMAAISGDV-RANLLTGKASLGG 1472
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+T+ I +++ GND++ ++V G +V +G SG + F
Sbjct: 1473 EL---LTLHSPESIHNLISGDGNDILTAGRESSVLDGGRGLNVLEGGSGNEVFVV 1524
>gi|211970994|dbj|BAG82826.1| hypothetical protein [Pasteurella pneumotropica]
Length = 711
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/261 (14%), Positives = 83/261 (31%), Gaps = 24/261 (9%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G +N + + G N + + +++ G GND + G N++ G+D
Sbjct: 365 SGNRNSTITGNNGDNILKGNSGNNILYGNNGNDTLFGDLGNDKLFGGKGNDILEGGKGDD 424
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+G G D + + I + + + + +E+ F +
Sbjct: 425 YLEGGEGDDIYKFNFNDGNDTIIDSKGSDKIILGKGIE------LEKTYFKLENNKL--- 475
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
L + + + G K + F S +I F S YL +YDD+ ++
Sbjct: 476 ----TLSFIDTNASVSIDRGYKKRRLSKKYDYFNKSI--NINFHSGHYL-NYDDILDIIK 528
Query: 417 SDRGAAARHYITHGVKEGRNPDAF--------KALEYIASHEDLINAFADAPDLVQVGKD 468
+++ Y + K + ++ L+ + + L
Sbjct: 529 NNQVKNIVKYELYDKKVLSSSESTTLIGDIGKDFLQGNSKNNHLEGKSGSDVYYFSGAIG 588
Query: 469 HFSNFGCEEGRFVTFDSYLYL 489
+ + + + FD Y
Sbjct: 589 NDTIYDEAGNDKIYFDESFYG 609
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 81/299 (27%), Gaps = 27/299 (9%)
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
Y + S + + + + L+ L
Sbjct: 346 YLSASGDINLPEYIRNAQLSGNRNSTITGNNGDNILKGNSGNNILYGNNGNDTLFGDLGN 405
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L G D+ E K EG DI + + D + + GSD+ +
Sbjct: 406 DKLFGGKGNDILEGGKGDDYLEGGEGDDIYK--FNFNDGNDTIIDSKGSDKI-----ILG 458
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G++ + + + S D + + + ++ + + F S Y
Sbjct: 459 KGIELEKTYFKLENNKLTLSFIDTNASVSIDRGYKKRRLSKKYDYFNKSIN-INFHSGHY 517
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKE----------GRNPDAFKALEYIASHEDLIN 538
L +YDD+ ++ +++ Y + K G F L+ + + L
Sbjct: 518 L-NYDDILDIIKNNQVKNIVKYELYDKKVLSSSESTTLIGDIGKDF--LQGNSKNNHLEG 574
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLY------LTSYDDLWNVFGSDRSAAA 591
+ + + I F+ Y DL F +
Sbjct: 575 KSGSDVYYFSGAIGNDTIYDEAGNDKIYFDESFYGRDILFAKVNMDLRISFSQSNESIL 633
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 59/187 (31%), Gaps = 55/187 (29%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-------------LTLIGGVKNYIDLNTES 249
G++IYK TI DS G D + L ++ID N
Sbjct: 431 GDDIYKFNFN----DGNDTIIDSKGSDKIILGKGIELEKTYFKLENNKLTLSFIDTNASV 486
Query: 250 WSSIGGYEKNMT---------------------------IAQHTVIESVV---------- 272
G ++ ++ I ++ ++++V
Sbjct: 487 SIDRGYKKRRLSKKYDYFNKSININFHSGHYLNYDDILDIIKNNQVKNIVKYELYDKKVL 546
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
SS + +IG+ + +S N+ +G SG D +++ IY +Y
Sbjct: 547 SSSESTTLIGDIGKDFLQGNSKNNHLEGKSGSDVYYFSGAIGNDTIYDEAGNDKIYFDES 606
Query: 333 H-KQDFL 338
+D L
Sbjct: 607 FYGRDIL 613
Score = 38.2 bits (87), Expect = 4.0, Method: Composition-based stats.
Identities = 37/270 (13%), Positives = 74/270 (27%), Gaps = 34/270 (12%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + N + +S + + D +G + + G
Sbjct: 365 SGNRNSTITGNNGDNILKGNSGNNILYGNNGNDTLFGDLGNDKLFGGKGNDILEGGKG-D 423
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G +Y + + ND+ + S D ++ + ++K Y
Sbjct: 424 DYLEGGEGDDIYKFNFNDGNDTIIDS-----KGSDKIILGKG-----------IELEKTY 467
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ + + D N+ + ++ I
Sbjct: 468 FKLENNK--LTLSFIDTNASVSIDRGYKKRRLSKKYDYFNKSININFHSGHYLNYDDILD 525
Query: 256 YEKNMTIAQHTVIE-------------SVVGSSGNDVVIGNSANNVFFESSGNDVFD--G 300
KN + E +++G G D + GNS NN SG+DV+ G
Sbjct: 526 IIKNNQVKNIVKYELYDKKVLSSSESTTLIGDIGKDFLQGNSKNNHLEGKSGSDVYYFSG 585
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G DT + A + + A
Sbjct: 586 AIGNDTIYDEAGNDKIYFDESFYGRDILFA 615
>gi|11762044|gb|AAG40300.1|AF314516_1 leukotoxin [Mannheimia haemolytica]
Length = 953
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 83/266 (31%), Gaps = 22/266 (8%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T + F +N D+ + + + + G G + + EI
Sbjct: 572 TDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGTTEIDGGE 631
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA-V 191
G G Y +D E + +V + + T +V + +
Sbjct: 632 GYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VESGKALHEVTSTHTALVGNREEKI 689
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ + + G Y + K ++ I + +D+ +
Sbjct: 690 EYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFN-------------D 730
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + TI + + + G G+D++ G + ++ GND+ G G D F +
Sbjct: 731 AFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRQ 790
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDF 337
I E + ++ + +D
Sbjct: 791 GDGNDSITESEGNDKLSFSDSNLKDL 816
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 60/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I G+D V
Sbjct: 571 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-IAKLGEGDDNVF 619
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 620 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVESGKALHEVTSTHT 679
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L VE + K +
Sbjct: 680 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVD 739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 740 TIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRQGD 792
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + L + S+
Sbjct: 793 GNDSITESEGNDKLSFSDSN 812
>gi|73621153|sp|Q9EV32|LKA16_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762030|gb|AAG40293.1|AF314509_1 leukotoxin [Mannheimia haemolytica]
Length = 953
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 83/266 (31%), Gaps = 22/266 (8%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T + F +N D+ + + + + G G + + EI
Sbjct: 572 TDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGTTEIDGGE 631
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA-V 191
G G Y +D E + +V + + T +V + +
Sbjct: 632 GYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VESGKALHEVTSTHTALVGNREEKI 689
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ + + G Y + K ++ I + +D+ +
Sbjct: 690 EYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFN-------------D 730
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + TI + + + G G+D++ G + ++ GND+ G G D F +
Sbjct: 731 AFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRQ 790
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDF 337
I E + ++ + +D
Sbjct: 791 GDGNDSITESEGNDKLSFSDSNLKDL 816
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 60/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I G+D V
Sbjct: 571 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-IAKLGEGDDNVF 619
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 620 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVESGKALHEVTSTHT 679
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L VE + K +
Sbjct: 680 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVD 739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 740 TIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRQGD 792
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + L + S+
Sbjct: 793 GNDSITESEGNDKLSFSDSN 812
>gi|146280079|ref|YP_001170236.1| sulfate ABC transporter, periplasmic sulfate-binding protein
[Rhodobacter sphaeroides ATCC 17025]
gi|145558320|gb|ABP72931.1| sulfate ABC transporter, periplasmic sulfate-binding protein
[Rhodobacter sphaeroides ATCC 17025]
Length = 485
Score = 71.4 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 8/162 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + I G D LD GG + + + G +
Sbjct: 320 PDRLTGGAGPERISGGAGHDRLDGRGGRDVLQGGTGDDLLRGGPGDDGLFGGAGRDRLEG 379
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G +GNDV++G + ++V +G D G +G D F Y I F A
Sbjct: 380 GAGHDRLYGGAGNDVLLGGAGDDVLRGHAGGDRLHGGAGADVFVYRRGDGGDLILDFNRA 439
Query: 325 IIVYDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
+ D +H+ ++ + F +V L+
Sbjct: 440 HDLIDLPLHLDHRMRAVAGDTLIDFGGGDRLTVRGILPDALD 481
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 36/147 (24%), Gaps = 28/147 (19%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + E + G +G+D + G +V +G+D+ G G D F
Sbjct: 314 LSGTSRPDRLTGGAGPERISGGAGHDRLDGRGGRDVLQGGTGDDLLRGGPGDDGLF---- 369
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
A D L +L A + L
Sbjct: 370 ---------GGAGRDRLEGGAGHDRL---------------YGGAGNDVLLGGAGDDVLR 405
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITF 399
G D F G
Sbjct: 406 GHAGGDRLHGGAGADVFVYRRGDGGDL 432
Score = 44.4 bits (103), Expect = 0.067, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 30/139 (21%), Gaps = 42/139 (30%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G S + +G + G +G D +D L
Sbjct: 314 LSGTSRPDRLTGGAGPERISGGAGHDRL----------------------DGRGGRDVLQ 351
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+L + L G+D E G D+
Sbjct: 352 G---------------GTGDDLLRGGPGDDGLFGGAGRDRLEGGAGHDRLYGGAGNDVLL 396
Query: 400 DSYLYLGSYDDLRNVFGSD 418
G+ DD+
Sbjct: 397 G-----GAGDDVLRGHAGG 410
Score = 39.0 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 41/172 (23%), Gaps = 6/172 (3%)
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
DG + + + + + + + ER+
Sbjct: 286 LDGLPAQPRAAFGGLFPTFGPEAPDPRPLSGTSRPDRLTGGAGPERISGGAGHDRLDGRG 345
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
R +L+ + L G D G D LY G+ +D+
Sbjct: 346 GRDVLQGGTGDDLLRGGPGDDGLFGGAGRDRLEGGAGHD-----RLYGGAGNDVLLGGAG 400
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
D H + G D F L A + + DH
Sbjct: 401 DDVL-RGHAGGDRLHGGAGADVFVYRRGDGGDLILDFNRAHDLIDLPLHLDH 451
>gi|332706931|ref|ZP_08426991.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332354196|gb|EGJ33676.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 287
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/241 (13%), Positives = 63/241 (26%), Gaps = 3/241 (1%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG N + ++ G N ++ +S+VG +G D +IG + + +G+D
Sbjct: 6 GGPGNDTLMGGAGDDTLRGNAGNDSLVGGAGDDSLVGGAGKDTLIGGAGKDTLMGGAGDD 65
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVN 355
G++G D+ + + + + + LR V
Sbjct: 66 TLRGNAGNDSLV--GGAGDDSLVGGAGKDTLIGGAGKDTLMGGAGDDTLRGNAGNDSLVG 123
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
L A + L+ G+D G D L N
Sbjct: 124 GAGDDSLVGGAGDDSLLGGAGKDTLIGGAGKDTLIGGVGNDSLSGGVGNDSLSGGLGNDT 183
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
++ + + + S+ L G
Sbjct: 184 IVGVNPSSNNPGVNEIDTLTGGAGADTFAIGNSNNPYYVGGGGPAGLNDYALITDFQSGT 243
Query: 476 E 476
+
Sbjct: 244 D 244
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/226 (11%), Positives = 56/226 (24%), Gaps = 8/226 (3%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAP 312
+ + ++++G +G+D + GN+ N+ +G+D G +G DT
Sbjct: 2 VVLIGGPGNDTLMGGAGDDTLRGNAGNDSLVGGAGDDSLVGGAGKDTLIGGAGKDTLMGG 61
Query: 313 SYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + + + + L + L A + L
Sbjct: 62 AGDDTLRGNAGNDSLVGGAGDDSLVGGAGKDTLIGGAGKDTLMGGAGDDTLRGNAGNDSL 121
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+ G D G+D + N S G
Sbjct: 122 VGGAGDDSLVGGAGDDSLLGGAGKDTLIGGAGKDTLIGGVGNDSLSGGVGNDSLSGGLGN 181
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ + + L + + + G
Sbjct: 182 DTIVGVNPSSNNPGVNEIDTLTGGAGADTFAIGNSNNPYYVGGGGP 227
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 51/179 (28%), Gaps = 12/179 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ T+ G D L D TL G N + S+ G + ++
Sbjct: 81 GDDSLVGGAGKDTLIGGAGKDTLMGGAGDDTLRGNAGNDSLVGGAGDDSLVGGAGDDSLL 140
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-------Y 316
++++G +G D +IG N+ GND G G DT PS
Sbjct: 141 GGAGKDTLIGGAGKDTLIGGVGNDSLSGGVGNDSLSGGLGNDTIVGVNPSSNNPGVNEID 200
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ A N + ++ D + + ++
Sbjct: 201 TLTGGAGADTFAIGNSNNPYYVGGGGPAGLNDYALITDFQSGTDKIQLKQGINYTFGSN 259
Score = 38.2 bits (87), Expect = 4.5, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 42/197 (21%), Gaps = 12/197 (6%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ + L A + L G D G+D + D
Sbjct: 2 VVLIGGPGNDTLMGGAGDDTLRGNAGNDSLVGGAGDDSLVGGAGKDTL----IGGAGKDT 57
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L G D G +L A + LI + G D
Sbjct: 58 LMGGAGDDTLR-----GNAGNDSLVGGAGDDSLVGGAGKDTLIGGAGKDTLMGGAGDDTL 112
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
+ +G D + G+ + G +L
Sbjct: 113 RGNAGNDSLVGGAGDDSLVGGAGDDSLLGGAGKDTLI---GGAGKDTLIGGVGNDSLSGG 169
Query: 531 ASHEDLINAFADAPDLV 547
++ L + +
Sbjct: 170 VGNDSLSGGLGNDTIVG 186
>gi|254424933|ref|ZP_05038651.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
gi|196192422|gb|EDX87386.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
Length = 1327
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 67/224 (29%), Gaps = 8/224 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
++ G D+L D L GG + + ++ G + N T+
Sbjct: 1076 GGNDFLDGGNGDDSLDGGRGRDILFGGNGDDILFGGADSDTLDGGKGNDTLDGGKGNDTL 1135
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+S+ G GND +IG + ++ GND DG G D+ L ++ +
Sbjct: 1136 DGGRGDDSLFGGDGNDSLIGGADSDTLGGGKGNDTLDGGKGNDSL--DGGRGLDALFGND 1193
Query: 323 NAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
I+ ++ D + L R +L + LI D
Sbjct: 1194 GNDILSGGADNDTLDGGRGNDTLDGGRGNDFLTGGSGRDVLLGGDGNDTLIGGGNNDTLT 1253
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
F LS G + L G + +
Sbjct: 1254 GGNGRDTFVLSTGDGADTITDFDSKDLVGLAGGLGIGDLSFVGN 1297
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 75/261 (28%), Gaps = 22/261 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ DS ++ + L T G + + ++ + G N +
Sbjct: 1027 GADPNGYDSGESYVVFGAADIGLSTSTRFGTSGDDTLIGGKNKDILFGLGGNDFLDGGNG 1086
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYR 320
+S+ G G D++ G + +++ F + +D DG G DT ++
Sbjct: 1087 DDSLDGGRGRDILFGGNGDDILFGGADSDTLDGGKGNDTLDGGKGNDTLDGGRGDDSLFG 1146
Query: 321 FENAIIVYDANEHKQ----------DFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + + D + L IL A +
Sbjct: 1147 GDGNDSLIGGADSDTLGGGKGNDTLDGGKGNDSLDGGRGLDALFGNDGNDILSGGADNDT 1206
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARH 425
L G D + + GRD+ D+ + G+ D L G D +
Sbjct: 1207 LDGGRGNDTLDGGRGNDFLTGGSGRDVLLGGDGNDTLIGGGNNDTLTGGNGRDTFVLSTG 1266
Query: 426 YITHGVKEGRNPDAFKALEYI 446
+ + + D +
Sbjct: 1267 DGADTITDFDSKDLVGLAGGL 1287
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 73/246 (29%), Gaps = 8/246 (3%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S I D+ G + N + G NG ++G +
Sbjct: 1056 GTSGDDTLIGGKNKDILFGLGGNDFLDGGNGDDSLDGGRGRDILFGGNGDDILFGGADSD 1115
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
D + + +D G + ++ GA +LG K
Sbjct: 1116 TLDGGKGNDTLDGGKGNDTLDGGRGDDSLFGGDGNDSLIG--GADSDTLGGG--KGNDTL 1171
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
++ G D L G N I ++ G N T+ + + G
Sbjct: 1172 DGGKGNDSLDGGRGLDAL----FGNDGNDILSGGADNDTLDGGRGNDTLDGGRGNDFLTG 1227
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
SG DV++G N+ ND G +G DTF I F++ +V A
Sbjct: 1228 GSGRDVLLGGDGNDTLIGGGNNDTLTGGNGRDTFVLSTGDGADTITDFDSKDLVGLAGGL 1287
Query: 334 KQDFLS 339
LS
Sbjct: 1288 GIGDLS 1293
Score = 37.8 bits (86), Expect = 6.5, Method: Composition-based stats.
Identities = 34/252 (13%), Positives = 59/252 (23%), Gaps = 34/252 (13%)
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
G D AP Y + +V+ A + + + K +
Sbjct: 1015 GDGFDDLIIGAPGADPNGYDSGESYVVFGAADIGLSTSTRF----GTSGDDTLIGGKNKD 1070
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
IL + L G D + + G DI F D L G+D
Sbjct: 1071 ILFGLGGNDFLDGGNGDDSLDGGRGRDILFGGNGDDILFG----GADSDTLDGGKGNDTL 1126
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ G +L ++ LI G D +
Sbjct: 1127 DGGK-----GNDTLDGGRGDDSLFGGDGNDSLIGGADSDTLGGGKGNDTLDGGKGNDSLD 1181
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
G+ + G+D L+ ++ L
Sbjct: 1182 GGRGLDALFGNDGNDILSGGAD---------------------NDTLDGGRGNDTLDGGR 1220
Query: 541 ADAPDLVQAGKD 552
+ +G+D
Sbjct: 1221 GNDFLTGGSGRD 1232
>gi|297692149|ref|XP_002823430.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-19-like
[Pongo abelii]
Length = 507
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 49/162 (30%), Gaps = 38/162 (23%)
Query: 50 NAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF--------- 99
A+ R A +WS V LTF E + +DI+
Sbjct: 124 TARAALRQAFQDWSNVAPLTFREVQAGAADIRLSFHGRQSSYCSNTFDGPGRVLAHADIP 183
Query: 100 --MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
++FD+ + W G G L A HE+GHALGL H
Sbjct: 184 ELGSVHFDEDEFWTEGTYHGVNLRIIAAHEVGHALGLGH--------------------- 222
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
Y + + + D+ +Q +YG
Sbjct: 223 -----SRYSQALMAPVYEGYRPHFKLHPDDVAGIQALYGKKS 259
>gi|149916041|ref|ZP_01904564.1| heme peroxidase [Roseobacter sp. AzwK-3b]
gi|149810115|gb|EDM69963.1| heme peroxidase [Roseobacter sp. AzwK-3b]
Length = 1388
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 70/223 (31%), Gaps = 7/223 (3%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGG---DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
N + +++ D G D L G + + + + G E
Sbjct: 1115 DNTSMSPDTDTSAEGIVESDTDMGAPLVGAAGDDILSGMAGDDMLVGNAGDDMLFGGEGR 1174
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + G +G+D ++G +++ +G+D+ G++G DTF IY
Sbjct: 1175 DDMLGGDGADMLSGGAGSDHILGGDGDDMIIGGTGSDILMGNAGDDTFLGTNGDCNDLIY 1234
Query: 320 RFENAIIVYDANEHKQDFL----SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
E + A+ + + +R + + A + +
Sbjct: 1235 GGEGTDTIDMASVTSDLTVRLGNTGTDRGSVTTEEGGRDTIWSIENFVGGAGDDTIFASD 1294
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+V + F D L + D L+ G+D
Sbjct: 1295 AANVLDGGDGNDTFVFETAASAQGDHINGLNAGDVLQFGTGAD 1337
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 45/141 (31%), Gaps = 18/141 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW--SSIGGYE 257
G+ G++ + + IY G D +D+ + NT + S
Sbjct: 1215 GNAGDDTFLG----TNGDCNDLIYGGEGTDTIDMASVTSDLTVRLGNTGTDRGSVTTEEG 1270
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
TI IE+ VG +G+D + + A NV DG G DTF + +
Sbjct: 1271 GRDTIW---SIENFVGGAGDDTIFASDAANVL---------DGGDGNDTFVFETAASAQG 1318
Query: 318 IYRFENAIIVYDANEHKQDFL 338
+ D
Sbjct: 1319 DHINGLNAGDVLQFGTGADMF 1339
>gi|149185557|ref|ZP_01863873.1| hypothetical protein ED21_21069 [Erythrobacter sp. SD-21]
gi|148830777|gb|EDL49212.1| hypothetical protein ED21_21069 [Erythrobacter sp. SD-21]
Length = 548
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 74/500 (14%), Positives = 125/500 (25%), Gaps = 72/500 (14%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
S F + IY + DDL+ D + G + + G + + I T +
Sbjct: 12 GSDFAEVIYGTYYDDLIEAFGGDDEVYAGAGQDLVYGDAGDDILFGDDGSDIIYGGTGFD 71
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------------FYYAPS 313
++ G G D++ G ++ F +GND+ G G D F +
Sbjct: 72 TIYGGFGWDLLFGEDGDDDIFGGNGNDILRGGYGWDLLAGQNGDDLLLGQNGNDFLVGGN 131
Query: 314 YLYKIYRFENAIIVYDA-------NEHKQDFLS---DVERLRFADQCIDSVNVKQRSILE 363
++Y A ++ D L V+ L + L
Sbjct: 132 GADELYGGNGADTLWGGMHGDWLEGGPGADILRGDAGVDVLWGGADDDELYGGDDHDTLS 191
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
A ++DL G DV G DI Y ++ + +
Sbjct: 192 GEAGHDDLYGNFGDDVISGGTGIDFLDGGTGNDILEGGLDADSLYGNIGDDYLDGGDGDD 251
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+G D + + + F + D + ++ +
Sbjct: 252 FLAGFNGDDTIYGGDGADQIYGGTGIDVVFGGFGADEIYGESQDDILTGEQGDDRIDGGY 311
Query: 484 DSYLYLGSYDDLRNVFGSDR------GAAARHYITHGVKEGRNPDAFKA----------- 526
G D + G Y G E D +
Sbjct: 312 GHDAIDGGIGDDFLIGGFGNDVLLSQTGLDALYGGVGNDELSGGDGNDSLFGEDGDDTLF 371
Query: 527 -------LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYL------ 573
L +DL + + AG D G ++ N +
Sbjct: 372 GDRGADFLGGGNGDDDLYGGAGNDRIVGGAGSD--LITGGRGSDEMSGNAGADIFYWEFV 429
Query: 574 --TSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLS 631
D F S + G G AL AD
Sbjct: 430 ARNGDVDTITDFTSGEDFLEFGALYFGFLTGGALP-------EEFFHLGSKAIDADDIFI 482
Query: 632 FDHKKVDLYTDYFGDGNYYD 651
+D +L+ D G G
Sbjct: 483 YDQATGNLFFDNDGAGGEDQ 502
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/349 (14%), Positives = 91/349 (26%), Gaps = 49/349 (14%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
R D+ + D G T+ ++ G G + G
Sbjct: 160 ADILRGDAGVDVLWGGADDDELYGGDDHDTLSGEAGHDDLYGNFGDDVISGGTGIDFLDG 219
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ + L + Y D +D G + + IY
Sbjct: 220 GTGNDILEGGLDADSLYGNIGDDYLDGGDGDDFLAGF---------------NGDDTIYG 264
Query: 209 IE--VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ Q I ++ G D + G ++ I + I G + I
Sbjct: 265 GDGADQIYGGTGIDVVFGGFGADEI----YGESQDDILTGEQGDDRIDGGYGHDAIDGGI 320
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ ++G GNDV++ + + + GND G G D+ F
Sbjct: 321 GDDFLIGGFGNDVLLSQTGLDALYGGVGNDELSGGDGNDSLF------------------ 362
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
E D L L A + ++ G D+ +
Sbjct: 363 ----GEDGDDTLFG------DRGADFLGGGNGDDDLYGGAGNDRIVGGAGSDLITGGRGS 412
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
E + G DI + ++ D F S + G G
Sbjct: 413 DEMSGNAGADIFYWEFVARNGDVDTITDFTSGEDFLEFGALYFGFLTGG 461
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 43/377 (11%), Positives = 90/377 (23%), Gaps = 11/377 (2%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + D+ G I N + G NG + G
Sbjct: 61 SDIIYGGTGFDTIYGGFGWDLLFGEDGDDDIFGGNGNDILRGGYGWDLLAGQNGDDLLLG 120
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ + + Y + ++ G G +
Sbjct: 121 QNGNDFLVGGNGADELYGGNGADTLWGGMHGDWLEGGPGADILRGDAGVDVLWGGAD--- 177
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + T+ G D L G + + + G N +
Sbjct: 178 -DDELYGGDDHDTLSGEAGHD----DLYGNFGDDVISGGTGIDFLDGGTGNDILEGGLDA 232
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S+ G+ G+D + G ++ +G+D G G D + + + ++ A +Y
Sbjct: 233 DSLYGNIGDDYLDGGDGDDFLAGFNGDDTIYGGDGADQIY--GGTGIDVVFGGFGADEIY 290
Query: 329 DANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
++ +R+ L + L+ G D
Sbjct: 291 GESQDDILTGEQGDDRIDGGYGHDAIDGGIGDDFLIGGFGNDVLLSQTGLDALYGGVGND 350
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
E +G D F + D F Y G +
Sbjct: 351 ELSGGDGNDSLFGEDGDDTLFGDRGADFLGGGNGDDDLYGGAGNDRIVGGAGSDLITGGR 410
Query: 448 SHEDLINAFADAPDLVQ 464
+++ +
Sbjct: 411 GSDEMSGNAGADIFYWE 427
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 58/226 (25%), Gaps = 12/226 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++GS +V+ G +++ G+D +G D + + ++ + + I+Y
Sbjct: 10 LIGSDFAEVIYGTYYDDLIEAFGGDDEVYAGAGQDLVY--GDAGDDILFGDDGSDIIYGG 67
Query: 331 NEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTA---------SYEDLIQVIGQDVF 380
+ + L D D IL + L+ G D
Sbjct: 68 TGFDTIYGGFGWDLLFGEDGDDDIFGGNGNDILRGGYGWDLLAGQNGDDLLLGQNGNDFL 127
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
E G D + + E D
Sbjct: 128 VGGNGADELYGGNGADTLWGGMHGDWLEGGPGADILRGDAGVDVLWGGADDDELYGGDDH 187
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
L A H+DL F D G D + D+
Sbjct: 188 DTLSGEAGHDDLYGNFGDDVISGGTGIDFLDGGTGNDILEGGLDAD 233
>gi|254475137|ref|ZP_05088523.1| hypothetical protein RR11_972 [Ruegeria sp. R11]
gi|214029380|gb|EEB70215.1| hypothetical protein RR11_972 [Ruegeria sp. R11]
Length = 517
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 60/415 (14%), Positives = 99/415 (23%), Gaps = 55/415 (13%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S + + RYD + AD + G + ++ A
Sbjct: 73 SGSQIVTATGFSLSGYDLSRYDFATLITREMAGADTFTSAWNSGEYIETLGGNDTIRAGS 132
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
GY V S + + D A+
Sbjct: 133 GNDTIDGGTGYDTVMVRATGNEWSISWGYSRGVEVSSPDGEDTLLNVERVQFEDQTALIA 192
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
GA GN+ + + GGDD + +
Sbjct: 193 EGGA-----GNDRLISTQTVIGNSLWDMMNGRGGDDTIQ-------------GGGGRDFL 234
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA-- 311
G N I + + G GND++ G + N+ SG+D G +G DT +
Sbjct: 235 IGERGNDLIKGGANHDYISGGDGNDILHGQAGNDKIRGFSGSDTIYGGAGNDTLYADFEN 294
Query: 312 ---PSYLYKIYRFENAIIVYD----------------ANEHKQDFLSDV----------- 341
++Y ++ + QD L
Sbjct: 295 SVDSDSADRLYGGAGKDLLVGQRSADYLNGGIDKDTLRGDAGQDTLLGGNGWDRLLGGAD 354
Query: 342 -ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ LR + +L+ A + L+ G D + G D+ F
Sbjct: 355 RDLLRGGNGRDYLAGHSGADVLDGGAHADRLLGGGGNDTLKGGTGTDLLNGGSGNDLLFG 414
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
G D L G DR + F + D
Sbjct: 415 ----GGGNDTLLGGTGRDRLLGQAGDDQLTGGAYADTFVFHQGYGNDTITDFSVG 465
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 57/346 (16%), Positives = 88/346 (25%), Gaps = 59/346 (17%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ + N+ SGND DG +G DT A + I + V ++ +D
Sbjct: 117 EYIETLGGNDTIRAGSGNDTIDGGTGYDTVMVRATGNEWSISWGYSRG-VEVSSPDGEDT 175
Query: 338 LSDVERLRFADQC-------------------------IDSVNVKQRSILEYTASYEDLI 372
L +VER++F DQ ++ + LI
Sbjct: 176 LLNVERVQFEDQTALIAEGGAGNDRLISTQTVIGNSLWDMMNGRGGDDTIQGGGGRDFLI 235
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDIT--------------FDSYLYLGSYDDLRNVFGS- 417
G D+ + + +G DI D+ D L F +
Sbjct: 236 GERGNDLIKGGANHDYISGGDGNDILHGQAGNDKIRGFSGSDTIYGGAGNDTLYADFENS 295
Query: 418 -DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
D +A R Y G + L + L L G D G +
Sbjct: 296 VDSDSADRLYGGAGKDLLVGQRSADYLNGGIDKDTLRGDAGQDTLLGGNGWDRLL-GGAD 354
Query: 477 EGRFVTFDSYLYLGSYD------------DLRNVFGSDR----GAAARHYITHGVKEGRN 520
+ YL + L G+D G
Sbjct: 355 RDLLRGGNGRDYLAGHSGADVLDGGAHADRLLGGGGNDTLKGGTGTDLLNGGSGNDLLFG 414
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
L + L+ D A D F +IT
Sbjct: 415 GGGNDTLLGGTGRDRLLGQAGDDQLTGGAYADTFVFHQGYGNDTIT 460
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/297 (15%), Positives = 87/297 (29%), Gaps = 23/297 (7%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ G T + I D+ + G I + + G ++G
Sbjct: 217 NGRGGDDTIQGGGGRDFLIGERGNDLIKGGANHDYISGGDGNDILHGQAGNDKIRGFSGS 276
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV-------AVQKIYG 196
+YG + + + + A +D + ++ G
Sbjct: 277 DTIYGGAGNDTLYADFENSVDSDSADRLYGGAGKDLLVGQRSADYLNGGIDKDTLRGDAG 336
Query: 197 APKGSLGNNIYKI-----EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
GN ++ + + G D+LD GG L
Sbjct: 337 QDTLLGGNGWDRLLGGADRDLLRGGNGRDYLAGHSGADVLD----GGAHADRLLGGGGND 392
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + + + G GND ++G + + +G+D G + DTF ++
Sbjct: 393 TLKGGTGTDLLNGGSGNDLLFGGGGNDTLLGGTGRDRLLGQAGDDQLTGGAYADTFVFHQ 452
Query: 312 PSYLYKIYRFENA--IIVYDANEHKQDFLS-----DVERLRFADQCIDSVNVKQRSI 361
I F I + D L+ D ++ FAD I N +
Sbjct: 453 GYGNDTITDFSVGQDRIQIGRGANGLDDLTFNTSGDDIQITFADVTILVENTTLAEL 509
>gi|126740125|ref|ZP_01755815.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
gi|126718944|gb|EBA15656.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
Length = 546
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 45/310 (14%), Positives = 79/310 (25%), Gaps = 27/310 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + + + + G+D L G + L + + G+ + T+
Sbjct: 147 GDDRMEGGYGDDVLRGAAGEDEL----FGNSGHDELLGDDGNDYLSGHTGDDTLVGGRGR 202
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRF 321
+S+ G GND + GN+ N++ G+D G G DT + + +
Sbjct: 203 DSLRGGQGNDSLRGNAGNDIIDGHEGDDTLLGDRGHDTLSGGAGDDYLHGGESSDLLLGG 262
Query: 322 ENAIIVYDANEHKQDFL--------SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + + + + + L+
Sbjct: 263 AGDDSMVGGVGSDTLYGGEGNDRIEVNTHSWSSRNTGSFVDGGSGNDSISGAIGDDTLLG 322
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN-VFGSDRGAAARHYITHGVK 432
G D G D F S Y S L G+D
Sbjct: 323 GDGDDTIRGGSGADSIDGGSGDDRLFGSRGYGDSEGILITGGSGNDTIFGDGTIHGGTGD 382
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ + + Y D I D + D R D LY S
Sbjct: 383 DSIDGGYRQDTIYGGEGSDYIRGEGDDDLIFGGDGDDAL-------RGNGGDDTLYADSG 435
Query: 493 DDLRNVFGSD 502
D D
Sbjct: 436 SDTLIGGADD 445
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 76/281 (27%), Gaps = 29/281 (10%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
N + D G G + + + G
Sbjct: 207 GGQGNDSLRGNAGNDIIDGHEGDDTLLGDRGHDTLSGGAGDDYLHGGESSDLLLGGAGDD 266
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G +YG + + + S S + + + D +
Sbjct: 267 SMVGGVGSDTLYGGEGNDRIEVNTHSWSSRNTGSFVDGGSGNDSISGAIGDDTL------ 320
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE------- 248
LG + + + +I GDD L + G I +
Sbjct: 321 ------LGGD---GDDTIRGGSGADSIDGGSGDDRLFGSRGYGDSEGILITGGSGNDTIF 371
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+I G + +I +++ G G+D + G +++ F G+D G+ G DT +
Sbjct: 372 GDGTIHGGTGDDSIDGGYRQDTIYGGEGSDYIRGEGDDDLIFGGDGDDALRGNGGDDTLY 431
Query: 309 -------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ +Y + + ++ + + E
Sbjct: 432 ADSGSDTLIGGADDDHLYAGDGSSLLTGGEDADTFYFGSNE 472
>gi|308388771|gb|ADO31091.1| iron-regulated protein FrpC, truncated [Neisseria meningitidis
alpha710]
Length = 456
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 45/258 (17%), Positives = 80/258 (31%), Gaps = 11/258 (4%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + N T + +D + +G G G +N + G
Sbjct: 92 QNVGFGHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGR 151
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYEN-----DSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+ + + ++ DS +V SYF S
Sbjct: 152 KDIIRFTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGK 211
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEV--QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
VA K + +Y + +Y + GDDLL+ G N
Sbjct: 212 VLDVATVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLN----GDAGNDS 267
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ ++ G E N + + + + G GND + G N+ +GND +G SG
Sbjct: 268 IYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSG 327
Query: 304 LDTFFYYAPSYLYKIYRF 321
DT+ + +Y +
Sbjct: 328 SDTYVFGKGFGQDTVYNY 345
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 70/242 (28%), Gaps = 45/242 (18%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------- 322
G + N + GN N+ +GND +G SG DT+ + +Y ++
Sbjct: 97 GHNKNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGEGFGQDTVYNYDYATGRKDIIR 156
Query: 323 ---------------------------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ V ++ ++ + F + + V
Sbjct: 157 FTDGITADMLTFTREGNHLLIKAKDDSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 216
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDL 411
++ + + T + L + ++G D+ + +Y G+ +D
Sbjct: 217 TVKKLVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDT 276
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
N + Y +G + L ++ LI + G D +
Sbjct: 277 LNGGEGNDAL----YGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV 332
Query: 472 NF 473
Sbjct: 333 FG 334
>gi|302875210|ref|YP_003843843.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578067|gb|ADL52079.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 1099
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 52/416 (12%), Positives = 114/416 (27%), Gaps = 16/416 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ N T + D+ + G T+ + G
Sbjct: 575 YGGNGDDTIVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEKGT 634
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF------------MPQDSMMDASFGYCAT 182
G D ++ S + A
Sbjct: 635 DTLTGGAGSDTYVFRKGDGQDIIVDYSGEANTIIDTLKFEDIDASEVSLNCTGYDLIIAV 694
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+D V +Q + A + N +K + +I + G + D +L
Sbjct: 695 NGTTDSVRIQNYFTADLYKIENIQFKDGTTWDINTIRNSIVYANGTEEKD-SLYAAGPVT 753
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
++ ++ N I I++++ +GND + G N++ + G+D+ +G
Sbjct: 754 MN-GYGGDDTLRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGNDILYGRVGDDLLEGGL 812
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT + A +Y + + + D + + + ++
Sbjct: 813 GNDTLYGEAGQDIYVFRKGDGQDTINDTAGENNTIIDTLRFEDIDSTEVTLNKSAYDLVI 872
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
S + + + + EF DI Y+ N S +
Sbjct: 873 TVNGSSDSVRILSYFYSNDYKVEKIEFQDGVVLDINAIMKGYVYINGTNSNEQISGYCSG 932
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+I + + G + + L A ++ + D + G D ++
Sbjct: 933 ENEFIGNVIINGFDGN--DTLNGSAGNDKVYGGNGDDTIVGNNGDDTLEGGAGKDT 986
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 61/418 (14%), Positives = 120/418 (28%), Gaps = 36/418 (8%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE-----------IGH 130
G + D+ G+G T+ I
Sbjct: 394 TVYGYGGDDLLYGGEGNDILHGGQGDDLLEGGLGNDTLYGEAGQDIYVFRKGDGQDTIND 453
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP------- 183
G + + N S V++ DS+ S+ Y
Sbjct: 454 TAGENNTIIDTLRFEDIDSTEVTLNKSAYDLVITVNGSSDSVRILSYFYSNDYKVEKIEF 513
Query: 184 ---MVSDIVAVQKIY-GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+V DI A+ K Y + I + + I G+D L+ +
Sbjct: 514 QDGVVLDINAIMKGYVYINGTNSNEQISGYCSGENEFIGNVIINGFDGNDTLNGSAGNDK 573
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+I G + T+ +++ GS+G D++ G S ++ G+D+ D
Sbjct: 574 V----YGGNGDDTIVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILD 629
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G G DT A S Y + + I+ D + ++ L+F D V++
Sbjct: 630 GEKGTDTLTGGAGSDTYVFRKGDGQDIIVDYSGEANTI---IDTLKFEDIDASEVSLNCT 686
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
Y+ +I V G +++++ L + +I F ++ ++
Sbjct: 687 -------GYDLIIAVNGTTDSVRIQNYFTADLYKIENIQFKDGTTWDINTIRNSIVYANG 739
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
G L +++ + + G D +
Sbjct: 740 TEEKDSLYAAGPVTMNGYGGDDTLRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGND 797
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 46/307 (14%), Positives = 87/307 (28%), Gaps = 17/307 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS--HNALHEIGHALG 133
+ D G+ + + I G
Sbjct: 783 AGAGNDSLYGEVGNDILYGRVGDDLLEGGLGNDTLYGEAGQDIYVFRKGDGQDTINDTAG 842
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP---------- 183
+ + N S V++ DS+ S+ Y
Sbjct: 843 ENNTIIDTLRFEDIDSTEVTLNKSAYDLVITVNGSSDSVRILSYFYSNDYKVEKIEFQDG 902
Query: 184 MVSDIVAVQKIY-GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+V DI A+ K Y + I + + I G+D L+ +
Sbjct: 903 VVLDINAIMKGYVYINGTNSNEQISGYCSGENEFIGNVIINGFDGNDTLNGSAGNDKV-- 960
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+I G + T+ +++ GS+G D++ G S ++ G+D+ DG
Sbjct: 961 --YGGNGDDTIVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEK 1018
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT A S Y + + I+ D + + ++ A + I+
Sbjct: 1019 GTDTLTGGAGSDTYVFRKGDGQDIIVDYSGEANTIIDTLKFEDIAASEVSLNCTGYDLII 1078
Query: 363 EYTASYE 369
S +
Sbjct: 1079 AVNDSTD 1085
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/348 (13%), Positives = 89/348 (25%), Gaps = 29/348 (8%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ G T R ++ D G G ++ + +G
Sbjct: 752 VTMNGYGGDDTLRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGNDILYGRVG------D 805
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ G D Y V QD++ D + +
Sbjct: 806 DLLEGGLGNDTLYGEAGQDIYVFRKGDGQDTINDTAGENNTIIDTLRFEDIDSTEVTLNK 865
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
S + + + + Y + + GV I+ + + I G N
Sbjct: 866 SAYDLVITVNGSSDSVRILSYFYSNDYKVE-KIEFQDGVVLDINAIMKGYVYINGTNSNE 924
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I+ + E+ GN ++ G N+ S+GND G +G DT
Sbjct: 925 QISGYCSGEN--EFIGNVIINGFDGNDTLNGSAGNDKVYGGNGDDTIV------------ 970
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
N +D L + + L + L G D
Sbjct: 971 -GNNGDDTLEGGAGKDTLRG------SAGKDILKGGSEDDTLNGEIGDDILDGEKGTDTL 1023
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ +G Y G + + + + AA+ +
Sbjct: 1024 TGGAGSDTYVFRKGDGQDI-IVDYSGEANTIIDTLKFEDIAASEVSLN 1070
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/298 (14%), Positives = 78/298 (26%), Gaps = 55/298 (18%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I+D + L + G I + +I + T+ + + + G GND++
Sbjct: 357 IFDRKAINTL--LVYGTPDKDIITVSSKNETIFALASDDTVYGYGGDDLLYGGEGNDILH 414
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA----------------- 324
G +++ GND G +G D + + I
Sbjct: 415 GGQGDDLLEGGLGNDTLYGEAGQDIYVFRKGDGQDTINDTAGENNTIIDTLRFEDIDSTE 474
Query: 325 ----------IIVYDANEHKQDFLS-------DVERLRFADQCIDSVNVKQRSILEYTAS 367
+I + + LS VE++ F D + +N + + +
Sbjct: 475 VTLNKSAYDLVITVNGSSDSVRILSYFYSNDYKVEKIEFQDGVVLDINAIMKGYVYINGT 534
Query: 368 YEDLIQV---------IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ IG + S G D +Y G+ DD D
Sbjct: 535 NSNEQISGYCSGENEFIGNVIINGFDGNDTLNGSAGND-----KVYGGNGDDTIVGNNGD 589
Query: 419 RGAAARH-----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ G + L + L G D +
Sbjct: 590 DTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEKGTDTLTGGAGSDTYV 647
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 44/286 (15%), Positives = 72/286 (25%), Gaps = 70/286 (24%)
Query: 221 TIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
T+ GGDD L GG + S+ G N + + + G
Sbjct: 753 TMNGYGGDDTLRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGNDILYGRVGDDLLEGGL 812
Query: 276 GNDVVIGNSANN--VFFESSGNDVFDGSSG-----LDTFFYYAPSYLYKIYRFENAIIVY 328
GND + G + + VF + G D + ++G +DT + +V
Sbjct: 813 GNDTLYGEAGQDIYVFRKGDGQDTINDTAGENNTIIDTLRFEDIDSTEVTLNKSAYDLVI 872
Query: 329 D--ANEHKQDFLS-------DVERLRFADQCIDSV------------------------- 354
+ LS VE++ F D + +
Sbjct: 873 TVNGSSDSVRILSYFYSNDYKVEKIEFQDGVVLDINAIMKGYVYINGTNSNEQISGYCSG 932
Query: 355 --------------------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ + ++ G D E S G
Sbjct: 933 ENEFIGNVIINGFDGNDTLNGSAGNDKVYGGNGDDTIVGNNGDDTLEGGAGKDTLRGSAG 992
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+DI D L G D + T G + F
Sbjct: 993 KDILKGGSED----DTLNGEIGDDILDGEKGTDTLTGGAGSDTYVF 1034
>gi|73621159|sp|Q9EV27|LKA2E_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|73621161|sp|P0C085|LKA7B_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762042|gb|AAG40299.1|AF314515_1 leukotoxin [Mannheimia haemolytica]
gi|16033547|gb|AAL13281.1|AF414141_2 LktA [Mannheimia haemolytica]
Length = 953
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 83/266 (31%), Gaps = 22/266 (8%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T + F +N D+ + + + + G G + + EI
Sbjct: 572 TDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGTTEIDGGE 631
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA-V 191
G G Y +D E + +V + + T +V + +
Sbjct: 632 GYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VESGKALHEVTSTHTALVGNREEKI 689
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ + + G Y + K ++ I + +D+ +
Sbjct: 690 EYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFN-------------D 730
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + TI + + + G G+D++ G + ++ GND+ G G D F +
Sbjct: 731 AFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRQ 790
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDF 337
I E + ++ + +D
Sbjct: 791 GDGNDSITESEGNDKLSFSDSNLKDL 816
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 60/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I G+D V
Sbjct: 571 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-IAKLGEGDDNVF 619
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 620 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVESGKALHEVTSTHT 679
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L VE + K +
Sbjct: 680 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVD 739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 740 TIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRQGD 792
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + L + S+
Sbjct: 793 GNDSITESEGNDKLSFSDSN 812
>gi|158338171|ref|YP_001519348.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158308412|gb|ABW30029.1| hemolysin-type calcium-binding region [Acaryochloris marina
MBIC11017]
Length = 1539
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 81/563 (14%), Positives = 140/563 (24%), Gaps = 66/563 (11%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E +D + + G T + D G G T+ +
Sbjct: 864 ENVIGSNDADLLIGD-GESNTLQGLDGDDALQGGGGNDTLEGGAGDDTLQGGGGNDSLDG 922
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G + G V N S V + G + I+A
Sbjct: 923 GEGTDIASFADIGADVNVTLNADGTGSAEYEVN--GRTVTDTFTSIEGVIGSANNDTIIA 980
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+G G++ I +GG D LD ++I++
Sbjct: 981 NGAAGNIIEGGAGDD---------------FIAGAGGTDTLDGGEGNDTNSFINIGAPVV 1025
Query: 251 SSIGGYEKNMTIAQHTVIES------VVGSSGNDVVIGNSANNVF--------------- 289
+S+ + + TV E+ + GS+ ND + G+ +N
Sbjct: 1026 ASLASGSASYEVGSGTVFENFSNFENLDGSAQNDQLFGDGNDNTLAGNDGDDLLSGGGGD 1085
Query: 290 ------------FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
GND+ DG G+DT + QD
Sbjct: 1086 DTLLGGLGDDTLQGGGGNDLTDGGDGIDTADFQNIGADVTADLSTGQAQYIANGNPIQDQ 1145
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--------HFYEF 389
LS++E L + ++L A + L G D+ +
Sbjct: 1146 LSNIENLTGSTNNDALTGDDGDNVLAGNAGNDTLQGGAGNDLLRGDEIGSGTAIRVTVTN 1205
Query: 390 GLSEGRDITFDSYLYL--GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
L EG + G+ DL G G EG +
Sbjct: 1206 TLGEGGTFLTPIWFGFHDGANFDLFTA-GEAASLGLERLAEDGSIEGIAAEFNAQTGANG 1264
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+I + + + F ++ + + + D A
Sbjct: 1265 VDGTIIGGAGIPGPIDPGESASLTLNVNANQVGLGFFTWGTMIIPSNDAFLSVPDNPLAD 1324
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
+ G G + + + + ++ N A A G G F
Sbjct: 1325 PIFDAAGNFIGPVVIERRGSDVLDAGTEVNNELDAAFLNQTARDTGLDENGVV-GAHPGF 1383
Query: 568 NPDLYLTSYDDLWNVFGSDRSAA 590
N D V + A
Sbjct: 1384 NGS---VGNPDATPVNILGGTTA 1403
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 252 SIGGYEKNMTIAQHTVIES-VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+G + + + IE + +G+D++ G N+ GND G +G D F +
Sbjct: 1411 VVGDFTADDDLLLRINIERVAIADAGDDLLEGGEGNDTLEGGGGNDTLTGGAGNDVFVFE 1470
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDF 337
A S + F+ A V D + D
Sbjct: 1471 ADSGANIVTDFDIADDVLDVSAIFSDL 1497
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 66/518 (12%), Positives = 123/518 (23%), Gaps = 56/518 (10%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
++ I +N + D G G T N + +L
Sbjct: 969 VIGSANNDTIIANGAAGNIIEGGAGDDFIAGAGGTDTLDGGEGNDTNSFINIGAPVVASL 1028
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G V+ +++EN F + A
Sbjct: 1029 ASGSASYEVGSGTVFENFSNFENLDGSAQNDQLFGDGNDNTLAGNDGDDLLSGG------ 1082
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G + + G D D IG DL+T
Sbjct: 1083 ------GGDDTLLGGLGDDTLQGGGGNDLTDGGDGIDTADFQNIGADVTA-DLSTGQAQY 1135
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I N Q + IE++ GS+ ND + G+ +NV ++GND G +G D
Sbjct: 1136 I--ANGNPIQDQLSNIENLTGSTNNDALTGDDGDNVLAGNAGNDTLQGGAGNDLLRGDEI 1193
Query: 313 SYLYKIYRFENAII---------VYDANEHKQ--DFLSDVERLRFA------DQCIDSVN 355
I + ++ D + E D I+ +
Sbjct: 1194 GSGTAIRVTVTNTLGEGGTFLTPIWFGFHDGANFDLFTAGEAASLGLERLAEDGSIEGIA 1253
Query: 356 VKQRSILEYTASYEDLIQVIGQ--------------DVFESMKHFYEFGLSEGRDITFDS 401
+ + +I G +V + F + D+
Sbjct: 1254 AEFNAQTGANGVDGTIIGGAGIPGPIDPGESASLTLNVNANQVGLGFFTWGTMIIPSNDA 1313
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
+L + +F + I + + E A+ + +
Sbjct: 1314 FLSVPDNPLADPIFDAAGNFIGPVVIERRGSDVLDAGTEVNNELDAAFLNQTARDTGLDE 1373
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI---------- 511
VG N + + + + D A +
Sbjct: 1374 NGVVGAHPGFNGSVGNPDATPVNILGGTTAPGAVIDPVVGDFTADDDLLLRINIERVAIA 1433
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
G + LE ++ L + + +A
Sbjct: 1434 DAGDDLLEGGEGNDTLEGGGGNDTLTGGAGNDVFVFEA 1471
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 19/152 (12%), Positives = 42/152 (27%), Gaps = 14/152 (9%)
Query: 333 HKQDFLSDVERLRFA---------DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ D L+++E + + + + L+ + L G D +
Sbjct: 855 AETDTLTNIENVIGSNDADLLIGDGESNTLQGLDGDDALQGGGGNDTLEGGAGDDTLQGG 914
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
EG DI + + L + Y +G + + +
Sbjct: 915 GGNDSLDGGEGTDIASFADIGADVNVTLNADGTG-----SAEYEVNGRTVTDTFTSIEGV 969
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
A+++ +I A + D F
Sbjct: 970 IGSANNDTIIANGAAGNIIEGGAGDDFIAGAG 1001
>gi|114570054|ref|YP_756734.1| cadherin [Maricaulis maris MCS10]
gi|114340516|gb|ABI65796.1| Cadherin [Maricaulis maris MCS10]
Length = 1421
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 63/498 (12%), Positives = 109/498 (21%), Gaps = 21/498 (4%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E T + G G+ T++ NA
Sbjct: 588 EIRAGRAQTITLDMGAGADTVELGRWRGFDGGIGGNVTLTLGAGQDTVIFANAPSSTTIT 647
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
Y D + S D + +
Sbjct: 648 DFETGSTGDTLQINDYLGRTLSSWDGGNPFASGHLRLVQSGSDTILQIDTNGGGDNWSDL 707
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ N + QTI + G D LD G + E
Sbjct: 708 ITFQNTTASTFTTNNFDGYNPDGSPIAGQTITGTAGADTLD----GTNGSDTIHGLEGDD 763
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N T+ +++ G SG+D++ G S ++ G+D +G +G DTF Y
Sbjct: 764 TLNGLGGNDTLNGDGGNDTLDGGSGSDILNGGSGDDRLDGGLGSDTLNGGNGHDTFVYSG 823
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV--------NVKQRSILE 363
S + + D L + N +
Sbjct: 824 ASGDGADAMHGGSGDDTF-SIINPDAPGGAAFLTITGGTGNDHLEVLATHLNGVSFDAGD 882
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
E + L R +G L G D A
Sbjct: 883 GDDHAEIRAGRAQTITLDMGAGADTVELGRWRGFD----GGIGGNVTLTLGAGQDTVIFA 938
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ + + L+ D + + D +
Sbjct: 939 NAPSSTTITDFETGSTGDTLQIN----DYLGRTLSSWDGGNPFASGHLRLVQSGSDTILQ 994
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
G F + + G +P A + + A + L
Sbjct: 995 IDTNGGGDNWSDLITFQNTTASTFTTNNFDGYNPDGSPIAGQTITGTAGADTLDGTNGSD 1054
Query: 544 PDLVQAGKDHFSNFGYEE 561
G D + G +
Sbjct: 1055 TIHGLEGDDTLNGLGGND 1072
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 60/438 (13%), Positives = 106/438 (24%), Gaps = 28/438 (6%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G +D + D+ S+ ++ A+ D A G
Sbjct: 349 AENVTGTVYTATASDADGDTVTFSLSGTDANLFTIDPATGEVS-FHTAPDYEAPADADGD 407
Query: 198 PKG------SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
S G V + I + G D LD T + +D
Sbjct: 408 NTYDITILASDGTQTSSHVVTITVTNENDVITGTAGADTLDGTNGSDTIHGLD----GDD 463
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N T+ +++ G SG+D++ G S ++ G+D +G +G DTF Y
Sbjct: 464 TLNGLGGNDTLNGDGGNDTLDGGSGSDILNGGSGDDRLDGGLGSDTLNGGNGHDTFVYSG 523
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV--------NVKQRSILE 363
S + + D L + N +
Sbjct: 524 ASGDGADAMHGGSGDDTF-SIINPDAPGGAAFLTITGGTGNDHLEVLATHLNGVSFDAGD 582
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
E + L R +G L G D A
Sbjct: 583 GDDHAEIRAGRAQTITLDMGAGADTVELGRWRGFD----GGIGGNVTLTLGAGQDTVIFA 638
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ + + L+ D + + D +
Sbjct: 639 NAPSSTTITDFETGSTGDTLQIN----DYLGRTLSSWDGGNPFASGHLRLVQSGSDTILQ 694
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
G F + + G +P A + + A + L
Sbjct: 695 IDTNGGGDNWSDLITFQNTTASTFTTNNFDGYNPDGSPIAGQTITGTAGADTLDGTNGSD 754
Query: 544 PDLVQAGKDHFSNFGYEE 561
G D + G +
Sbjct: 755 TIHGLEGDDTLNGLGGND 772
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 51/381 (13%), Positives = 86/381 (22%), Gaps = 17/381 (4%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E T + G G+ T++ NA
Sbjct: 888 EIRAGRAQTITLDMGAGADTVELGRWRGFDGGIGGNVTLTLGAGQDTVIFANAPSSTTIT 947
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
Y D + S D + +
Sbjct: 948 DFETGSTGDTLQINDYLGRTLSSWDGGNPFASGHLRLVQSGSDTILQIDTNGGGDNWSDL 1007
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ N + QTI + G D LD G + E
Sbjct: 1008 ITFQNTTASTFTTNNFDGYNPDGSPIAGQTITGTAGADTLD----GTNGSDTIHGLEGDD 1063
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G N T+ +++ G SG+D++ G S ++ G+D +G +G DTF Y
Sbjct: 1064 TLNGLGGNDTLNGDGGNDTLDGGSGSDILNGGSGDDRLDGGLGSDTLNGGNGHDTFVYSG 1123
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV--------NVKQRSILE 363
S + + D L + N +
Sbjct: 1124 ASGDGADAMHGGSGDDTF-SIINPDAPGGAAFLTITGGTGNDHLEVLATHLNGVSFDAGD 1182
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
E + L R +G L G D A
Sbjct: 1183 GDDHAEIRAGRAQTITLDMGAGADTVELGRWRGFD----GGIGGNVTLTLGAGQDTVIFA 1238
Query: 424 RHYITHGVKEGRNPDAFKALE 444
+ + + L+
Sbjct: 1239 NAPSSTTITDFETGSTGDTLQ 1259
>gi|146305757|ref|YP_001186222.1| hemolysin-type calcium-binding region [Pseudomonas mendocina ymp]
gi|145573958|gb|ABP83490.1| Hemolysin-type calcium-binding region [Pseudomonas mendocina ymp]
Length = 851
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 61/461 (13%), Positives = 113/461 (24%), Gaps = 38/461 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + D G G +
Sbjct: 335 YGGDGDDQLFGLAGDDLLFGGAGNDLLDGGKGVDTMVGGSGDDIYILD------------ 382
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H + +D D+ + S ++ + + +I VQ I
Sbjct: 383 DHRELERINQHGSDIYHDPGIDTLRITYKSMASAPLTVNLNAIN------LLEIENVQLI 436
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTES 249
P LGN ++ + + G+D D + ID S
Sbjct: 437 GAGPFEVLGN---GLDNRLDAGRGASVLRGGAGNDTYIVGHKDAKVFEAANEGIDTVLAS 493
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S G + G+ ++++IGN NN+ +G D +G G DT+
Sbjct: 494 VSFTLGANLENLTLLGKAALNGTGNELSNLLIGNDGNNILDGGTGADRMEGGKGNDTYIV 553
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASY 368
+ + I ++VE L ID + + +
Sbjct: 554 DH--EDDVVVENDKEGIDTVKASVTYTLGANVENLILTGSGDIDGSGNELNNAITGNDKD 611
Query: 369 EDLIQVIGQDVFESMKHFYEF-------GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L G D K + G + + + + + +
Sbjct: 612 NRLDGGAGVDKLAGGKGNDTYVVDLIQKGTGDKATAVLEDSIVEKANEGTDTLELRSDRL 671
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ T + G N + A A L + G + + +
Sbjct: 672 PSEFTGTASITLGANLENLDARNTGALKLTLTGNALNNEIWGNAGDNILNGGAGNDILHA 731
Query: 482 TFDSYLYL--GSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
L G+ D D G+ EG+
Sbjct: 732 GSGRNNILIGGTGADTMYGGVGDDTFRFTSLKDLGLGEGKQ 772
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/340 (11%), Positives = 79/340 (23%), Gaps = 29/340 (8%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ I + + + G N I + + + G G+D + G + +++ F +GND+
Sbjct: 301 AGDDVITGTDKHHNWLFGGAGNDKITGNAGSDELYGGDGDDQLFGLAGDDLLFGGAGNDL 360
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-----KQDFLS------------- 339
DG G+DT + +Y + + D L
Sbjct: 361 LDGGKGVDTMVGGSGDDIYILDDHRELERINQHGSDIYHDPGIDTLRITYKSMASAPLTV 420
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
++ + + + + L G V + + F
Sbjct: 421 NLNAINLLEIENVQLIGAGPFEVLGNGLDNRLDAGRGASVLRGGAGNDTYIVGHKDAKVF 480
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
++ F + G + L + L
Sbjct: 481 EAANEGIDTVLASVSFTLGANLENLTLLGKAALNGTGNELSNLLIGNDGNNILDGGTGAD 540
Query: 460 PDLVQVGKDHFS----NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
G D + + E D+ +Y L + + G
Sbjct: 541 RMEGGKGNDTYIVDHEDDVVVENDKEGIDTVKASVTYT-LGANVENLILTGSGDIDGSGN 599
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ L G D +
Sbjct: 600 ELNNAITGNDKDN------RLDGGAGVDKLAGGKGNDTYV 633
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/359 (11%), Positives = 82/359 (22%), Gaps = 49/359 (13%)
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
GL + G V + F + +D + + +++ +
Sbjct: 447 GLDNRLDAGRGASVLRGGAGNDTYIVGHKDAKVFEAANEGIDTVLASVSFTLGANLENLT 506
Query: 193 KIYGAPKGSLGNNIYK------IEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKN 241
+ A GN + + G+D + K
Sbjct: 507 LLGKAALNGTGNELSNLLIGNDGNNILDGGTGADRMEGGKGNDTYIVDHEDDVVVENDKE 566
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
ID S + G I + G+ N+ + GN +N +G D G
Sbjct: 567 GIDTVKASVTYTLGANVENLILTGSGDIDGSGNELNNAITGNDKDNRLDGGAGVDKLAGG 626
Query: 302 SGLDTFFYY---------------------APSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G DT+ A + + + ++
Sbjct: 627 KGNDTYVVDLIQKGTGDKATAVLEDSIVEKANEGTDTLELRSDRLPSEFTGTASITLGAN 686
Query: 341 VER------------LRFADQCIDSVNVKQRSILEYTASYEDLIQVIG-QDVFESMKHFY 387
+E L + +IL A + L G ++
Sbjct: 687 LENLDARNTGALKLTLTGNALNNEIWGNAGDNILNGGAGNDILHAGSGRNNILIGGTGAD 746
Query: 388 EFGLSEGRD----ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G D + D + F + G + + F A
Sbjct: 747 TMYGGVGDDTFRFTSLKDLGLGEGKQDEIHDFNKEGKDKLDFSPLKGWQFMGVGEQFAA 805
>gi|84685643|ref|ZP_01013540.1| hypothetical protein 1099457000253_RB2654_06719 [Maritimibacter
alkaliphilus HTCC2654]
gi|84666309|gb|EAQ12782.1| hypothetical protein RB2654_06719 [Rhodobacterales bacterium
HTCC2654]
Length = 1426
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 58/175 (33%), Gaps = 3/175 (1%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D D LIG I L + + G + + + ++G G+D + + ++
Sbjct: 1153 DGADNMLIGLGGQDILLGLDGNDRLVGGDGWDALYGGADRDILIGGEGDDYMDASFGDDK 1212
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+G D G SG+DT Y S + + D LS++E + +D
Sbjct: 1213 LIGGAGGDEMYGRSGIDTVLYTGSSAGVTLDLGAGTAS---GGDAAGDTLSEIENAQGSD 1269
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
D + L + L + G D GRD F +
Sbjct: 1270 FGDDITGDGGANRLIGRDGADTLSGLGGDDFLRGDAGDDTLDGGAGRDRIFGNDG 1324
Score = 53.3 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/312 (15%), Positives = 78/312 (25%), Gaps = 20/312 (6%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS-SGL 304
+ G + + + + G G+D + G + +G D DG G
Sbjct: 1045 GGAGRDWVRGGDDGDMVEGGDDRDWLFGDDGDDDLDGGEGADRLEGGAGADDLDGGLGGA 1104
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D Y + + DA D L+ +ER+ +D ++L
Sbjct: 1105 DLAVYKKSASGVTVDLGAGTGTGGDAQG---DTLTGIERVMGSDHNDVLTGDGADNMLIG 1161
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ L+ + G D + RDI G DD + D
Sbjct: 1162 LGGQDILLGLDGNDRLVGGDGWDALYGGADRDIL-----IGGEGDDYMDASFGDDKL--- 1213
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLI-NAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
G E + Y S + + A D S +G
Sbjct: 1214 -IGGAGGDEMYGRSGIDTVLYTGSSAGVTLDLGAGTASGGDAAGDTLSEIENAQGSDFGD 1272
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
D D R A G R L+ A + +
Sbjct: 1273 DIT------GDGGANRLIGRDGADTLSGLGGDDFLRGDAGDDTLDGGAGRDRIFGNDGAD 1326
Query: 544 PDLVQAGKDHFS 555
+ D F
Sbjct: 1327 VMTGGSDGDTFV 1338
>gi|259417930|ref|ZP_05741849.1| bifunctional hemolysin/adenylate cyclase [Silicibacter sp. TrichCH4B]
gi|259346836|gb|EEW58650.1| bifunctional hemolysin/adenylate cyclase [Silicibacter sp. TrichCH4B]
Length = 1456
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 64/233 (27%), Gaps = 14/233 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + T++ G D +D SI G + + T++ +
Sbjct: 959 DDSIRAGDGDDTVWAGAGSDTVD-------------GGSGKDSILGQDGDDTLSGGAGQD 1005
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G SG+DV+ G + GND G +G DT Y ++ +
Sbjct: 1006 TLDGGSGDDVLSGGDDADYMSGGIGNDTLSGDAGNDTL-YGQSGNDSLSGGDDDDRLDGG 1064
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
E S + L + L + L G D+ +F
Sbjct: 1065 VGEDTLYGDSGNDSLLGQGDDDALIGGDGNDTLSGGDGNDALFGGAGNDLMIGGSGDDQF 1124
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G D +D + + +D Y +
Sbjct: 1125 SAGTGNDTIYDFGTGNSGSINDGDNTNNDFVDLTHIYNQTTYDQAVADGLIDP 1177
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/265 (17%), Positives = 79/265 (29%), Gaps = 9/265 (3%)
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+D D+ S + G + A + GA +L N
Sbjct: 206 TQHDDTVDASADSSGVVLDGLGGNDSLTGGSGDDSIRGGDGADTILGGAGNDTLAAN--N 263
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ ++ G + L GG + + SI G N I+ +
Sbjct: 264 GDDSVDGGAGNDSLIGGSGANTL----AGGDGDDTISGGNAGDSIDGGADNDDISGNDGN 319
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G +G+D + G++ N+ GND G +G DT Y + +
Sbjct: 320 DTIFGGTGSDTIYGDAGNDSLEGGDGNDSLYGGAGSDTLR-GGDGDDYLGGGGDGDSLFG 378
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
DA S + L D + L+ + + G D
Sbjct: 379 DAGNDTLYSGSGLATLDGGDGNDRLYVSSGNTTLKGGTGNDSIHGGTGDDSMMGESGDDS 438
Query: 389 FGLSE--GRDITFDSYLYLGSYDDL 411
F L++ G D S D L
Sbjct: 439 FDLADDFGNDTIIGGETGETSGDTL 463
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/377 (14%), Positives = 98/377 (25%), Gaps = 48/377 (12%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ +GGDDL+D + G D+ S + + + N +A +++ G GND +
Sbjct: 54 VSGTGGDDLIDGSYTGDPDG--DMVDSSANVVEAGDGNDIVATGQGADTIYGGDGNDAIY 111
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII--------------- 326
+ G+D G DT + A S ++I I
Sbjct: 112 SGGDGDYVEGGGGDDTIYQGGGNDTVYGGAGSDTFEIPAQTGDSIYGGEDSDDSDVDIID 171
Query: 327 --------------VYDANEHKQDFLSDVE--RLRFADQCIDSVNVKQRSILEYTASYED 370
+ ++E L D +D+ +L+ +
Sbjct: 172 GSSASAPVNVLYTGDEAGSYVGGGTFEEIEGHTLTQHDDTVDASADSSGVVLDGLGGNDS 231
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L G D G D + N A G
Sbjct: 232 LTGGSGDDSIRGGDGADTILGGAGNDTLAANNGDDSVDGGAGNDSLIGGSGANTLAGGDG 291
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYL 489
+A +++ A ++D+ + G D + + G + + LY
Sbjct: 292 DDTISGGNAGDSIDGGADNDDISGNDGNDTIFGGTGSDTIYGDAGNDSLEGGDGNDSLYG 351
Query: 490 GSYDDLR--------------NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
G+ D Y G+ D L + +
Sbjct: 352 GAGSDTLRGGDGDDYLGGGGDGDSLFGDAGNDTLYSGSGLATLDGGDGNDRLYVSSGNTT 411
Query: 536 LINAFADAPDLVQAGKD 552
L + G D
Sbjct: 412 LKGGTGNDSIHGGTGDD 428
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 72/236 (30%), Gaps = 6/236 (2%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+G+ GN++ + + D+ + D + G + I + ++ E
Sbjct: 608 EGTSGNDLIDVNYTGDPDGDMVDADDNAAGNDNDSIVAGDGNDTIMSGSG-VDTVDAGEG 666
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + + + G +GND ++G S + GND DG D + A L +
Sbjct: 667 DDVVDGGSGNDVISGGAGNDSLMGGSGYDTIHGGDGNDTLDGGGNNDFLYGDAGDDLIRT 726
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
N + + + + + L + + G D
Sbjct: 727 -GSGNGSVFGGDGNDTLEGNDNGQAMSGGTGNDFIDGGGGVDHLYGDDGDDTIHGGDGGD 785
Query: 379 VFESMKHFYEFGLSEGRD----ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
EG D + D + G+ D + G D ++G
Sbjct: 786 SLYGGAGSDVIVGGEGADRIIGLEGDDNIEAGAGDYIDAGHGDDVITIDSSLSSNG 841
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/263 (11%), Positives = 66/263 (25%), Gaps = 8/263 (3%)
Query: 205 NIYKIEVQQKDSPFIQTI----YDSGGDDLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKN 259
+Y + + I D++D + + + ++ +
Sbjct: 918 TVYSDNDIVEGTGGNDMINAAYTGDPDGDMVDASDNAAGNDDDSIRAGDGDDTVWAGAGS 977
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ + +S++G G+D + G + + SG+DV G D + +
Sbjct: 978 DTVDGGSGKDSILGQDGDDTLSGGAGQDTLDGGSGDDVLSGGDDAD--YMSGGIGNDTLS 1035
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQD 378
+Y + + D + L + LI G D
Sbjct: 1036 GDAGNDTLYGQSGNDSLSGGDDDDRLDGGVGEDTLYGDSGNDSLLGQGDDDALIGGDGND 1095
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
G D+ N D G I G +
Sbjct: 1096 TLSGGDGNDALFGGAGNDLMIGGSGDDQFSAGTGNDTIYDFGTGNSGSINDGDNTNNDFV 1155
Query: 439 AFKALEYIASHEDLINAFADAPD 461
+ +++ + P
Sbjct: 1156 DLTHIYNQTTYDQAVADGLIDPT 1178
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 53/429 (12%), Positives = 95/429 (22%), Gaps = 16/429 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ R S D D + I G+
Sbjct: 707 DGGGNNDFLYGDAGDDLIRTGSGNGSVFGGDGNDTLEGNDNGQAMSGGTGNDFIDGGGGV 766
Query: 135 MHPGSYNGGYPVYGVDN-DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA--- 190
H +G ++G D D + V+ D ++ D +
Sbjct: 767 DHLYGDDGDDTIHGGDGGDSLYGGAGSDVIVGGEGADRIIGLEGDDNIEAGAGDYIDAGH 826
Query: 191 ---VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
V I + + + E ++D + D+LDL + GV D
Sbjct: 827 GDDVITIDSSLSSNGTITVIGGEYVEEDVNDATNNPNGRIGDVLDLRGLSGVTITYDETD 886
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+W+ + T V + + + S N++ + GND+ + + D
Sbjct: 887 STWNGVTSESGTATYENDAG--ETVTINFSQIETVYSDNDIVEGTGGNDMINAAYTGD-- 942
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEY 364
+ D + + + + L
Sbjct: 943 --PDGDMVDASDNAAGNDDDSIRAGDGDDTVWAGAGSDTVDGGSGKDSILGQDGDDTLSG 1000
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
A + L G DV G D Y N S R
Sbjct: 1001 GAGQDTLDGGSGDDVLSGGDDADYMSGGIGNDTLSGDAGNDTLYGQSGNDSLSGGDDDDR 1060
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
G +L + LI + G D +
Sbjct: 1061 LDGGVGEDTLYGDSGNDSLLGQGDDDALIGGDGNDTLSGGDGNDALFGGAGNDLMIGGSG 1120
Query: 485 SYLYLGSYD 493
+
Sbjct: 1121 DDQFSAGTG 1129
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 59/443 (13%), Positives = 112/443 (25%), Gaps = 28/443 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE---IGHA 131
D + T + + D G + + IG
Sbjct: 395 DGGDGNDRLYVSSGNTTLKGGTGNDSIHGGTGDDSMMGESGDDSFDLADDFGNDTIIGGE 454
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS----FGYCATPMVSD 187
G + + + D + + + + T +++D
Sbjct: 455 TGETSGDTLDLRNITSDLTIDLTSADAEAGSFTDGTSTATFTEIENIRLGRGSDTLVLAD 514
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ---------TIYDSGGDDLLDLTLIGG 238
+ G G+ ++ D T+ D+ GD D L
Sbjct: 515 GSGADAVQGFDMTDSGDGTTVDQLDVSDLTDADGNPVNVFDVTVADTNGDGTGDAILQFP 574
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS---------ANNVF 289
I L S SS+ M++ V G+SGND++ N +
Sbjct: 575 NGESITLAGVSPSSVNNQAALMSMGIPGPDYIVEGTSGNDLIDVNYTGDPDGDMVDADDN 634
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFAD 348
+ ND G DT + S + + E +V + + + + L
Sbjct: 635 AAGNDNDSIVAGDGNDTIM--SGSGVDTVDAGEGDDVVDGGSGNDVISGGAGNDSLMGGS 692
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
L+ + + L G D+ + +G D +
Sbjct: 693 GYDTIHGGDGNDTLDGGGNNDFLYGDAGDDLIRTGSGNGSVFGGDGNDTLEGNDNGQAMS 752
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
N F G Y G D +L A + ++ + G D
Sbjct: 753 GGTGNDFIDGGGGVDHLYGDDGDDTIHGGDGGDSLYGGAGSDVIVGGEGADRIIGLEGDD 812
Query: 469 HFSNFGCEEGRFVTFDSYLYLGS 491
+ + D + + S
Sbjct: 813 NIEAGAGDYIDAGHGDDVITIDS 835
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 61/493 (12%), Positives = 114/493 (23%), Gaps = 46/493 (9%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ D G G TI+S + + + G +G + G +
Sbjct: 630 DADDNAAGNDNDSIVAGDGNDTIMSGSGVDTVDAGEGDDVVDGGSGNDVISGGAGNDSLM 689
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
+ + +D + ++ G G+ + +
Sbjct: 690 GGSGYDTIHGGDGNDTLDGGGNNDFLYGDAGDDLIRTGSGNGSVFGGD----GNDTLEGN 745
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
Q + G+D +D GG + +I G + ++ + +VG G
Sbjct: 746 DNGQAMSGGTGNDFID----GGGGVDHLYGDDGDDTIHGGDGGDSLYGGAGSDVIVGGEG 801
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
D +IG ++ +G D D G D + V + +
Sbjct: 802 ADRIIGLEGDDNIEAGAG-DYIDAGHGDDVITIDSSLSSNGTITVIGGEYVEEDVNDATN 860
Query: 337 FLSD--------------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI------- 375
+ D + V + + + E +
Sbjct: 861 NPNGRIGDVLDLRGLSGVTITYDETDSTWNGVTSESGTATYENDAGETVTINFSQIETVY 920
Query: 376 -GQDVFESMKHFYEF-----GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
D+ E G +G + D +R G D A T
Sbjct: 921 SDNDIVEGTGGNDMINAAYTGDPDGDMVDASDNAAGNDDDSIRAGDGDDTVWAGAGSDTV 980
Query: 430 GVKEGRNP----DAFKALEYIASHEDLINAFADAPDLVQ------VGKDHFSNFGCEEGR 479
G++ D L A + L D G + G
Sbjct: 981 DGGSGKDSILGQDGDDTLSGGAGQDTLDGGSGDDVLSGGDDADYMSGGIGNDTLSGDAGN 1040
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
+ + Y G AL ++ L
Sbjct: 1041 DTLYGQSGNDSLSGGDDDDRLDGGVGEDTLYGDSGNDSLLGQGDDDALIGGDGNDTLSGG 1100
Query: 540 FADAPDLVQAGKD 552
+ AG D
Sbjct: 1101 DGNDALFGGAGND 1113
>gi|225074|prf||1208296B hemolysin hlyA
Length = 1024
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 58/199 (29%), Gaps = 34/199 (17%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + N + +++ G +G+D + G N+ +GN
Sbjct: 732 FGSKFTDIFHGADGDDLIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGVAGN 791
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D S +V L
Sbjct: 792 NYLNGGDGDDELQVQGNS-----------------------LAKNV--LFGGKGNDKLYG 826
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHF-----YEFGLSEGR----DITFDSYLYLG 406
+ +L+ + L G D++ + + + G E + DI F +
Sbjct: 827 SEGADLLDGGEGDDLLKGGYGNDIYRYLSGYGHHIIDDDGGKEDKLSLADIDFRDVAFKR 886
Query: 407 SYDDLRNVFGSDRGAAARH 425
+DL G + H
Sbjct: 887 EGNDLIMYKGEGNVLSIGH 905
>gi|38046598|gb|AAR09165.1| leukotoxin structural protein [Mannheimia ruminalis]
Length = 953
Score = 71.0 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 47/331 (14%), Positives = 100/331 (30%), Gaps = 28/331 (8%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
AD L++ + T + F L P + R G++ + L
Sbjct: 507 ADKLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERIQTGKYEYITKLNINRV 566
Query: 74 SI------HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F +N D+ + + V + G G + + E
Sbjct: 567 DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIVAKLGAGDDNVFVGSGTTE 626
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
I G G Y +D E + +V + + T +V +
Sbjct: 627 IDGGEGYDRVHYSRGNYGALTIDATKETERGSYTVNRF--VETGKALHEVTSTHTALVGN 684
Query: 188 IVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++ + + G Y + K ++ I + +D+ +
Sbjct: 685 REEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFN--------- 729
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + TI + + + G G+D++ G + ++ GND+ G G D
Sbjct: 730 ----DAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDI 785
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
F + I + + ++ + +D
Sbjct: 786 FVHRQGDGNDIITDSDGNDKLSFSDSNLKDL 816
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 62/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I +G+D V
Sbjct: 571 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-VAKLGAGDDNVF 619
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 620 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETERGSYTVNRFVETGKALHEVTSTHT 679
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L VE + K +
Sbjct: 680 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVD 739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 740 TIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRQGD 792
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + D L + S+
Sbjct: 793 GNDIITDSDGNDKLSFSDSN 812
>gi|241758766|ref|ZP_04756879.1| putative RTX toxins and related Ca2+-binding protein [Neisseria
flavescens SK114]
gi|241320974|gb|EER57187.1| putative RTX toxins and related Ca2+-binding protein [Neisseria
flavescens SK114]
Length = 569
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/262 (16%), Positives = 82/262 (31%), Gaps = 52/262 (19%)
Query: 118 TILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLT--SVMSYFMPQDSM 172
I + HE+GHALG H SY Y Y + + M + + +
Sbjct: 81 YITARTMSHEVGHALG-KHQAKSASYYDTAKAYAQARGYGEAEAIFNEARMVAYEERYNG 139
Query: 173 MDASFGYCATPMVS----------DIVAVQKIYGAPKGSLGNNI----------YKIEVQ 212
S G D++A Q +YG + +I + + +
Sbjct: 140 RAYSTGISGDLYPYVKGKSFGEVKDLIARQNMYGMYPSNGTGSIRMTYYETDIEHFLNTR 199
Query: 213 QKDSPFI-------------------QTIYDSGGDDLLDLTLIGGVKNYIDLNTESW--- 250
S + + G++ + + + +++
Sbjct: 200 TNFSKDFKEASISPNSKQVFVKHMANYDTFGNKGNNKIVADGSYSRDSLLIGRAKTYLKS 259
Query: 251 -SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ + G + + + ++G SGNDV+IG + N++ +SG D G G D
Sbjct: 260 GAYMYGDAGDDILKGTNQNDILLGGSGNDVLIGGNGNDILAGNSGRDKLFGGKGHDK--- 316
Query: 310 YAPSYLYKIYRFENAIIVYDAN 331
Y L I + V
Sbjct: 317 YRADNLDIIRDSDGKGEVSLNG 338
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 32/126 (25%), Gaps = 3/126 (2%)
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ Y + + + + +D L + IL+ T
Sbjct: 218 VFVKHMANYDTFGNKGNNKIVADGSYSRDSLLIGRAKTYLKSGAYMYGDAGDDILKGTNQ 277
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL---YLGSYDDLRNVFGSDRGAAAR 424
+ L+ G DV + GRD F Y D+ +
Sbjct: 278 NDILLGGSGNDVLIGGNGNDILAGNSGRDKLFGGKGHDKYRADNLDIIRDSDGKGEVSLN 337
Query: 425 HYITHG 430
YI G
Sbjct: 338 GYILQG 343
>gi|158336214|ref|YP_001517388.1| glycerophosphoryl diester phosphodiesterase [Acaryochloris marina
MBIC11017]
gi|158306455|gb|ABW28072.1| glycerophosphoryl diester phosphodiesterase, putative [Acaryochloris
marina MBIC11017]
Length = 1881
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 10/148 (6%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ + + G + TI ++++G GND++ G ++ F G D +
Sbjct: 1719 GIDVLSGGPTDDDLSGGRGDDTITGGLGDDNLMGGRGNDLLEGGQGDDDLFGGRGLDTLN 1778
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G+ G D + + A D ++D + + +
Sbjct: 1779 GNEGSDILV--GGRGDDLLTGGSGEDLFALAASDGTDTITD---FLIGEDVVGLIGGLSF 1833
Query: 360 SILE-----YTASYEDLIQVIGQDVFES 382
LE T + + LI V D +
Sbjct: 1834 EQLEIVQGTGTQTADTLISVAETDELLA 1861
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 65/243 (26%), Gaps = 21/243 (8%)
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ 220
++S P D D + + I V I +N Y + +
Sbjct: 1609 DLLSINDPNDLNGDGETTFNFPFVT--IEDVLVIDEDTLLVANDNNYPFSIGRGPDIDNN 1666
Query: 221 TIYDSGGDDLLDLT------LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
I ++ LDL + G + D S G + I+ + G
Sbjct: 1667 EIIQIKLNEPLDLDPRVGLAGLDGGDSDSDGEGNSDGEGSGDSSSDDSQGSRGIDVLSGG 1726
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIV 327
+D + G ++ G+D G G D + L + E + I+
Sbjct: 1727 PTDDDLSGGRGDDTITGGLGDDNLMGGRGNDLLEGGQGDDDLFGGRGLDTLNGNEGSDIL 1786
Query: 328 YDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRS---ILEYTASYEDLIQVIGQDVFE 381
E L +D + L S+E L V G
Sbjct: 1787 VGGRGDDLLTGGSGEDLFALAASDGTDTITDFLIGEDVVGLIGGLSFEQLEIVQGTGTQT 1846
Query: 382 SMK 384
+
Sbjct: 1847 ADT 1849
Score = 39.0 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 29/122 (23%), Gaps = 4/122 (3%)
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ D++ ++ L D + +
Sbjct: 1688 LDGGDSDSDGEGNSDGEGSGDSSSDDSQGSRGIDVLSGGPTDDDLSGGRGDDTITGGLGD 1747
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAAR 424
++L+ G D+ E + + G D L G DDL + A
Sbjct: 1748 DNLMGGRGNDLLEGGQGDDDLFGGRGLDTLNGNEGSDILVGGRGDDLLTGGSGEDLFALA 1807
Query: 425 HY 426
Sbjct: 1808 AS 1809
>gi|15837613|ref|NP_298301.1| hemolysin-type calcium binding protein [Xylella fastidiosa 9a5c]
gi|9105947|gb|AAF83821.1|AE003938_12 hemolysin-type calcium binding protein [Xylella fastidiosa 9a5c]
Length = 1636
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 66/493 (13%), Positives = 136/493 (27%), Gaps = 91/493 (18%)
Query: 144 YPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
P + VM++ ++ +D ++ + + D++ + YG+ +
Sbjct: 827 EPRLTDYLSGLRLTDNNGVMAWDASGLEAKLDQTWQHNKAQALQDVMDL-YRYGSNAVAA 885
Query: 203 GN-------------NIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNT 247
+ +Q + T+ G D DL L G +
Sbjct: 886 SGWKPFDALRHMIDRTAATPDGRQALAAAEITLVSGNAEGSDAADL-LFGDAGANLLRGG 944
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVV------------------GSSGNDVVIGN--SANN 287
+ G N T+ +++ G +GNDV+ + SA+N
Sbjct: 945 GGDDVLSGGGGNDTLEGGAGNDTLYGDDGDDVLDGGEGSNRLEGGAGNDVLKVSYWSADN 1004
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN---------------- 331
V +G+D GS+ DT+ + I +
Sbjct: 1005 VLIGGTGDDTLYGSAFADTYLFNQGDGHDTIIEQGGTDKLVFGEGILAADVRLLREGQDV 1064
Query: 332 ----EHKQDFLS---------------DVERLRFADQC-----------IDSVNVKQRSI 361
+ D + D+E++ FAD + ++
Sbjct: 1065 VLDLGNGHDSIRLKDWLTSNGTRNHSADIEQIVFADGTLWTPETLSSMGLTTLGTPGNDT 1124
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD--- 418
L+ + L+ G DV + + G D+ Y + + L G D
Sbjct: 1125 LKGWQGKDILLGGAGDDVLDGGEGSNRLEGGAGDDVLK--VSYWSADNVLSGGTGDDTLY 1182
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
A A Y+ + + + E ++ A Q N G +
Sbjct: 1183 GSAFADTYLFNQGDGHDTIIEQGGTDKLVFGEGILAADVRLLREGQDVVLDLGN-GHDSI 1241
Query: 479 RFVTFDSYLYLGSYD-DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
R + + ++ D+ + +D ++ L+ + L+
Sbjct: 1242 RLKDWLTSNGTRNHSADIEQIVFADGTLWTPETLSSMGLTTLGTSGNDTLKGWQGKDILL 1301
Query: 538 NAFADAPDLVQAG 550
D G
Sbjct: 1302 GGAGDDVLDGGEG 1314
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 67/497 (13%), Positives = 125/497 (25%), Gaps = 161/497 (32%)
Query: 56 RWALGEWSKVVDLTFE--ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYG 113
R AL ++T + + G R + D G
Sbjct: 908 RQALAA----AEITLVSGNAEGSDAADLLFGDAG-ANLLRGGGGDDVLSGGGGNDTLEGG 962
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
G T+ + +GG ++ ND +SY+ + ++
Sbjct: 963 AGNDTLYGDDGD------------DVLDGGEGSNRLEGGAGNDVLK---VSYWSADNVLI 1007
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL 233
+ +YG+ + Y TI + GG D L
Sbjct: 1008 GGTGD-------------DTLYGSAFA----DTYLFN----QGDGHDTIIEQGGTDKLVF 1046
Query: 234 ----------TLIGGVKNYIDLNTESWS-------------------------------- 251
L G +DL S
Sbjct: 1047 GEGILAADVRLLREGQDVVLDLGNGHDSIRLKDWLTSNGTRNHSADIEQIVFADGTLWTP 1106
Query: 252 --------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND------- 296
+ G N T+ + ++G +G+DV+ G +N +G+D
Sbjct: 1107 ETLSSMGLTTLGTPGNDTLKGWQGKDILLGGAGDDVLDGGEGSNRLEGGAGDDVLKVSYW 1166
Query: 297 ----VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN--------------------- 331
V G +G DT + A + Y + + + +
Sbjct: 1167 SADNVLSGGTGDDTLYGSAFADTYLFNQGDGHDTIIEQGGTDKLVFGEGILAADVRLLRE 1226
Query: 332 --------EHKQDFLS---------------DVERLRFADQC-----------IDSVNVK 357
+ D + D+E++ FAD + ++
Sbjct: 1227 GQDVVLDLGNGHDSIRLKDWLTSNGTRNHSADIEQIVFADGTLWTPETLSSMGLTTLGTS 1286
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L+ + L+ G DV + + G D+ Y + + L G
Sbjct: 1287 GNDTLKGWQGKDILLGGAGDDVLDGGEGSNRLEGGAGDDVLK--VSYWSADNVLIGGTGD 1344
Query: 418 DRGAAARHYITHGVKEG 434
D + T+ +G
Sbjct: 1345 DTLYGSAFADTYLFNKG 1361
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 40/322 (12%), Positives = 86/322 (26%), Gaps = 47/322 (14%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D+ G G L N G D
Sbjct: 1118 GTPGNDTLKGWQGKDILLGGAGDDV---------------LDGGEGSNRLEGGAGDDVLK 1162
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA-VQKIYGAPKGSLGNNIYKIEVQ 212
+ +V+S D++ ++F D + + G K G I +V+
Sbjct: 1163 VSYWSADNVLSGGTGDDTLYGSAFADTYLFNQGDGHDTIIEQGGTDKLVFGEGILAADVR 1222
Query: 213 QKDSPFIQTIYDSGGDDLL---------DLTLIGGVKNYIDLNTES-WSSIGGYEKNMTI 262
+ G D + I + W+ +T
Sbjct: 1223 LLREGQDVVLDLGNGHDSIRLKDWLTSNGTRNHSADIEQIVFADGTLWTPETLSSMGLTT 1282
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---------FYYAPS 313
+ +++ G G D+++G + ++V G++ +G +G D +
Sbjct: 1283 LGTSGNDTLKGWQGKDILLGGAGDDVLDGGEGSNRLEGGAGDDVLKVSYWSADNVLIGGT 1342
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLS---DVERLRFADQ----CIDSVNVKQRSILEYTA 366
+Y A D + ++L F + + + Q +L+
Sbjct: 1343 GDDTLYGSAFADTYLFNKGDGHDTIIEQGGTDKLVFGEGILAADVRLLREGQDVVLDLGN 1402
Query: 367 SYE-----DLIQVIGQDVFESM 383
++ D + G +
Sbjct: 1403 GHDSIRLKDWLTSNGTRNHSAD 1424
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 35/269 (13%), Positives = 64/269 (23%), Gaps = 35/269 (13%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + +V G G T+ G
Sbjct: 1303 GAGDDVLDGGEGSNRLEGGAGDDVLKVSYWSADNVLIGGTGDDTLYGSAFADTYLFNKGD 1362
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H G + V QD ++D
Sbjct: 1363 GHDTIIEQGGT---DKLVFGEGILAADVRLLREGQDVVLDLGN----------------- 1402
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G L + + + + Q ++ G L L T ++
Sbjct: 1403 -GHDSIRLKDWLTSNGTRNHSADIEQIVFADG---TLWTPETLSSMGLTTLGTPGNDTLK 1458
Query: 255 GYEKNMTIAQHTVI---------ESVVGSSGNDVVIGN--SANNVFFESSGNDVFDGSSG 303
G++ + + G +G+DV+ + SA+NV +G+D GS+
Sbjct: 1459 GWQGKDILLGGDGDDVLDGGEGSNRLEGGAGDDVLKVSYWSADNVLSGGTGDDTLYGSAF 1518
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANE 332
DT+ + I +
Sbjct: 1519 ADTYLFNKGDGHDTIIEQGGTDKLVFGAG 1547
Score = 40.5 bits (93), Expect = 0.85, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 71/289 (24%), Gaps = 37/289 (12%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+YG+ + Y TI + GG D L + L +
Sbjct: 1347 LYGSAFA----DTYLFN----KGDGHDTIIEQGGTDKLVFGEGILAADVRLLREGQDVVL 1398
Query: 254 GGYEKNMTI------------AQHTVIESVV---GSSGNDVVIGNSANNVFFESSGNDVF 298
+ +I IE +V G+ + + + GND
Sbjct: 1399 DLGNGHDSIRLKDWLTSNGTRNHSADIEQIVFADGTLWTPETLSSMGLTTL-GTPGNDTL 1457
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G G D + N + D L + +
Sbjct: 1458 KGWQGKDILLGGDGDDVLDGGEGSNRLE----GGAGDDVLK----VSYWSADNVLSGGTG 1509
Query: 359 RSILEYTASYED--LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
L +A + + G D + G ++ + S DDL +F
Sbjct: 1510 DDTLYGSAFADTYLFNKGDGHDTIIEQGGTDKLVFGAG--LSRKEARFTRSGDDLSLLFN 1567
Query: 417 SDRGAAA-RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
+ + + A E LI A A +P +
Sbjct: 1568 GSEDQVTVAGWFNGSGHQVESLVFQDGTVLSAEVERLIAAMALSPAVTT 1616
>gi|209525691|ref|ZP_03274228.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209493860|gb|EDZ94178.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 288
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/228 (16%), Positives = 68/228 (29%), Gaps = 7/228 (3%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G I Q G DL D G N + SI G E N
Sbjct: 15 TAEGAVIVGNPNQSNRIRGTADANSMQGGDLADTLTAGDNPNMVIYGFGGNDSIIGGEGN 74
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + +++ G +GN+++ G +++ + GN+ G G DT + I
Sbjct: 75 NKLYGNQGNDTIYGIAGNNLIYGGQGDDLIYGGDGNNSLSGDKGNDTLV--GGTGNDIIR 132
Query: 320 RFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ ++Y + + + + + + + L G D
Sbjct: 133 GGDGEDLIYGGGGNNLLYGEKGNDTIIGGPGNDIIYGGQGDDFIRGGDGNDFLAGDKGDD 192
Query: 379 VFESMKHFYEFG----LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
F + RD+ D G LR G D +
Sbjct: 193 TLTGGAGADTFAITASANLTRDVITDFNSAEGDIIALRAEAGYDLDSF 240
Score = 52.5 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 62/198 (31%), Gaps = 18/198 (9%)
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
P + NDS + + + + D +G ++ IYG +
Sbjct: 54 NPNMVIYGFGGNDSIIGGEGNNKLYGNQGNDTIYGIAGNNLIYGGQGDDLIYGGDGNNS- 112
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
T+ G+D++ GG + + + G + N TI
Sbjct: 113 ---------LSGDKGNDTLVGGTGNDII----RGGDGEDLIYGGGGNNLLYGEKGNDTII 159
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY----KIY 319
+ + G G+D + G N+ G+D G +G DTF A + L +
Sbjct: 160 GGPGNDIIYGGQGDDFIRGGDGNDFLAGDKGDDTLTGGAGADTFAITASANLTRDVITDF 219
Query: 320 RFENAIIVYDANEHKQDF 337
I+ E D
Sbjct: 220 NSAEGDIIALRAEAGYDL 237
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 69/241 (28%), Gaps = 25/241 (10%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSG 294
I N + I G ++ + +++ N V+ G N+ G
Sbjct: 14 FTAEGAVIVGNPNQSNRIRGTADANSMQGGDLADTLTAGDNPNMVIYGFGGNDSIIGGEG 73
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
N+ G+ G DT + + IY + ++Y D
Sbjct: 74 NNKLYGNQGNDTIY--GIAGNNLIYGGQGDDLIYGG-----------------DGNNSLS 114
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDD 410
K L + + G+D+ +G D + +Y G DD
Sbjct: 115 GDKGNDTLVGGTGNDIIRGGDGEDLIYGGGGNNLLYGEKGNDTIIGGPGNDIIYGGQGDD 174
Query: 411 -LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+R G+D A + T G + A A + A+ + +
Sbjct: 175 FIRGGDGNDFLAGDKGDDTLTGGAGADTFAITASANLTRDVITDFNSAEGDIIALRAEAG 234
Query: 470 F 470
+
Sbjct: 235 Y 235
Score = 44.4 bits (103), Expect = 0.070, Method: Composition-based stats.
Identities = 24/202 (11%), Positives = 49/202 (24%), Gaps = 2/202 (0%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T + V + G +V + +N ++ + G DT + IY F
Sbjct: 8 TEFQVVFTAEGAVIVGNPNQSNRIRGTADANSMQGGDLADTLT-AGDNPNMVIYGFGGND 66
Query: 326 IVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + + + + + + + ++ L G D
Sbjct: 67 SIIGGEGNNKLYGNQGNDTIYGIAGNNLIYGGQGDDLIYGGDGNNSLSGDKGNDTLVGGT 126
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+G D+ + Y + N Y G R D L
Sbjct: 127 GNDIIRGGDGEDLIYGGGGNNLLYGEKGNDTIIGGPGNDIIYGGQGDDFIRGGDGNDFLA 186
Query: 445 YIASHEDLINAFADAPDLVQVG 466
+ L +
Sbjct: 187 GDKGDDTLTGGAGADTFAITAS 208
>gi|332206790|ref|XP_003252478.1| PREDICTED: matrix metalloproteinase-19 [Nomascus leucogenys]
Length = 503
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 56/182 (30%), Gaps = 43/182 (23%)
Query: 35 LTTHRLSFDITEL-----NPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGY 88
L+F I L + A+ R A +WS V LTF E + +DI+
Sbjct: 104 WRKKHLTFRILNLPSTLPSHTARTALRQAFEDWSNVAPLTFREVQAGTADIRLSFHGRQS 163
Query: 89 VCTPRYDSRYF-----------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
++FD+ + W G +G L A HE+GHALGL H
Sbjct: 164 SYCSNTFDGPGRVLAHADIPELGSVHFDEDEFWTEGTYRGVNLRIIAAHEVGHALGLGH- 222
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
Y + + + D+ +Q +YG
Sbjct: 223 -------------------------SRYSQALMAPVYQGYRPHFKLHPDDVAGIQALYGK 257
Query: 198 PK 199
Sbjct: 258 KS 259
>gi|91790750|ref|YP_551701.1| hemolysin-type calcium-binding region [Polaromonas sp. JS666]
gi|91700630|gb|ABE46803.1| Hemolysin-type calcium-binding region [Polaromonas sp. JS666]
Length = 2097
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 56/320 (17%), Positives = 92/320 (28%), Gaps = 6/320 (1%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH--EIGHALGLMHPGSYNGGYPV 146
S F R G G TI +ALH + G +
Sbjct: 786 TAAGTASSSTDGNDTFANFYRIRGGSGNDTITGDSALHFEQFEGGAGNDSLDGGAITDTL 845
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
Y+N + +V + G T +++ V+ LG+N
Sbjct: 846 NVNRLTYQNATAGVTVDLLAGTAVTTNSTLAGNSGTDTLANFNQVRGSN-FNDTLLGSNT 904
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE--KNMTIAQ 264
+ Q + +I GG DL+ L T + + G +
Sbjct: 905 TALTEQFEGGLGDDSIDGRGGFDLVRFNSSSVAGVTASLATGTATGAGNDTFVNVEGLIG 964
Query: 265 HTVIESVVGS-SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+S+ G + N V + + VF +GND DG G D Y + + + +
Sbjct: 965 SDFNDSLTGGLAANGVTVSDGLLEVFRGGAGNDTIDGGQGYDRVHYDSSTSGVTVTLNDT 1024
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
A D L ++E +R +D + LE + L G D +
Sbjct: 1025 ADGSASDGLGGTDVLRNIEGVRGSDFSDSITGDAGNNRLEGLGGNDTLNGGDGNDTLDGG 1084
Query: 384 KHFYEFGLSEGRDITFDSYL 403
G D
Sbjct: 1085 AGDDTLLGGAGADTLIGGAG 1104
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/257 (15%), Positives = 72/257 (28%), Gaps = 32/257 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN---------YIDLNTE------------ 248
+ T+ G+D LD L ++L T
Sbjct: 19 DDTINGLAGNDTLIGGAGNDSLDGGLGTQDWANYSDAIAPVTVNLATGAAIGGSGNDTLT 78
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+I G N ++ ++ G G+D + G++ ++ +GND G G DT
Sbjct: 79 GLENIFGSAFNDSLTGDANSNALRGEVGDDTLDGDAGDDYLTGGAGNDSLTGGIGNDTAD 138
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV---------NVKQR 359
Y+ + + I + D L+ +E + + + V
Sbjct: 139 YFYSNAVAGI--NASLATGVVTGGDGSDTLTGIENINGTNFSDNIVGDSNANVLQGQGGD 196
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
L + L+ G DV D S +Y+ + +
Sbjct: 197 DTLNGGGGNDTLLGGAGADVITGGAGDDSLDGGLQTDAINFSDYNTLNYNGTTSALTINT 256
Query: 420 GAAARHYITHGVKEGRN 436
A T G N
Sbjct: 257 AAGTASSSTDGNDTFVN 273
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 61/405 (15%), Positives = 107/405 (26%), Gaps = 16/405 (3%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI-----GHALGLMHPGSYNGG 143
S F R G G TI +ALH L +
Sbjct: 256 TAAGTASSSTDGNDTFVNFYRIRGGSGNDTITGDSALHFEQFEGGAGNDSLDGGAITDTL 315
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
Y+N + +V + G T +++ V+ LG
Sbjct: 316 NGTNVNRLTYQNATAGVTVDLLAGTAVTTNSTLAGNSGTDTLANFNQVRGS-SFNDTLLG 374
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+N + Q + I GG D++ + + + N+
Sbjct: 375 SNTTALTEQFEGGLGDDYIDGLGGFDIVRFVNSASGVTASLADGAATGAGTDTFVNVEGL 434
Query: 264 QHTVIESVVGS--SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + N V + + VF +GND DG G D Y + +
Sbjct: 435 FGSDFNDSLTGGLAANGVTVSDGLLEVFRGGAGNDTIDGGQGYDRVHYDTSTSGVTVTLN 494
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ A D L +E +R +D + + LE + L+ G D
Sbjct: 495 DTADGSASDGLGGTDVLRSIEGVRGSDFNDIIIGNSGNNKLEGLGGNDSLLGGAGADTLL 554
Query: 382 SMKHFYEFGLSEGRD-ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE------- 433
G D I + L ++D + D G E
Sbjct: 555 GGAGNDWLVGGGGNDFIDGGTGSDLAYFEDAASGVVIDLSTGVVSNNGEGQVETIINVEN 614
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
++ + + + VG D+F +
Sbjct: 615 LHGSHFNDVIQLSSVGGYVFGRAGNDSLTGGVGNDNFIGGSSNDT 659
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 58/494 (11%), Positives = 112/494 (22%), Gaps = 17/494 (3%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
F ++ G T D G G T++ I
Sbjct: 1049 DFSDSITGDAGNNRLEGLGGNDTLNGGDGNDTLDGGAGDDTLLGGAGADTLIGGAGNDLI 1108
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
L L + + Y N S + + T M +
Sbjct: 1109 DGGLVLDRINGTDYNFVDYVSATAGVNISLSGITGDGSTGSGAATGDASVGVDTLMNVN- 1167
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
Q ++ + I Q + + D L+ V +
Sbjct: 1168 ---QIRGSNFNDTITGSTALIFEQFEGGAGNDILDGGAITDTLNGDNDNRVTYHNATGAG 1224
Query: 249 ------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN---VFFESSGNDVFD 299
+ +++G N+ V GS+ +D ++G+ + F +GND D
Sbjct: 1225 VAVDFIAGTAVGAAGSNIGSDTLANFNHVRGSNFDDTLLGSDRTDLTEQFEGRAGNDTID 1284
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G G D Y + + + D L ++E +R +
Sbjct: 1285 GRGGFDIVRYGSATAGVTVNLVTGTAT---GAGVGTDTLLNIEGVRGSAFDDVLTGGNAA 1341
Query: 360 SILEYTAS-YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ + E G D + + + + + + G+D
Sbjct: 1342 NGVTIGDGLSEVFRGEAGNDTIDGGQGYDRVDYTSSTAGVTVTLNDTADGSANDGLGGTD 1401
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ A E E ++ +
Sbjct: 1402 MLRNIEGVRGSAFNDSLTGSDTAAFESFEGREGDDTINGMGGVDRADYQNSRAGVTVNLA 1461
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
D R + L+ ++ LI
Sbjct: 1462 NNTASDDGYGGTDTLLNIENVRGSRDFNDSITGSAADNRLEGLGGNDTLDGGNGNDTLIG 1521
Query: 539 AFADAPDLVQAGKD 552
F + + AG D
Sbjct: 1522 GFGNDSLVGGAGID 1535
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 61/215 (28%), Gaps = 7/215 (3%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL-DTFFYYAPSYLYKIY 319
TI + + ++G++ +D + G + N+ +GND DG G D Y +
Sbjct: 3 TINGTSGNDDLIGTASDDTINGLAGNDTLIGGAGNDSLDGGLGTQDWANYSDAIAPVTVN 62
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
A I D L+ +E + + + L + L G D
Sbjct: 63 LATGAAI----GGSGNDTLTGLENIFGSAFNDSLTGDANSNALRGEVGDDTLDGDAGDDY 118
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
G D Y Y + + + T E N
Sbjct: 119 LTGGAGNDSLTGGIGNDTA--DYFYSNAVAGINASLATGVVTGGDGSDTLTGIENINGTN 176
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
F S+ +++ L G + G
Sbjct: 177 FSDNIVGDSNANVLQGQGGDDTLNGGGGNDTLLGG 211
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 65/441 (14%), Positives = 123/441 (27%), Gaps = 27/441 (6%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE--SWSSIGGYEKNMTIAQHTVIE 269
+ I S GD++LD + +Y + + T E
Sbjct: 1660 NGTGNNLANLILASAGDNILDGSTGNDTVSYAYSGAGVTASLTSRTATGGSGNDSVTNFE 1719
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+++GS+ D +IGN+ N + G D +G +G DT + S + + + +I
Sbjct: 1720 NIIGSNYADSLIGNTLANRLEGAGGADSLNGGTGADTLIGGSGSDQFYVENVGDIVIETG 1779
Query: 330 ANEHKQD--FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
++ + + A+ +N L G + +
Sbjct: 1780 SDALSGTDIVFAAISYALTANVENLRINTTGNVNATGNELDNVLFAGAGNNTLDGGDGID 1839
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
+ ++ S + T E +
Sbjct: 1840 TANYG-----------FTSGGVNVSLAIASAQATGNSGSDTLLNIENLTGSNYNDTLQGN 1888
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
S +++I L N + + ++L +D +
Sbjct: 1889 SADNVIEGGVGIDTLTYAAASAAVNASLSTKTASGGEGNDTILRIENLIGSAFNDLLTGS 1948
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
EG L + ++ L + L AG+D S G + F
Sbjct: 1949 SVANMLDGGEG-----NDTLNGSSGNDTLSGGGGNDRLLGGAGQD--SVSGGSGADTFDF 2001
Query: 568 NPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKAD 627
N T L SD SAAA I + ++G Q S + + A
Sbjct: 2002 NALA-ETGITSLTWDSISDFSAAAGDKIDLSTLD-ANTALAGNQAFSFIGTAN---FSAA 2056
Query: 628 LSLSFDHKKVDLYTDYFGDGN 648
+ +D +Y D +
Sbjct: 2057 GQVRYDAAAGMVYGSVDADAD 2077
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 61/423 (14%), Positives = 112/423 (26%), Gaps = 17/423 (4%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
G + + S + + + GY T + +I V+
Sbjct: 1428 SFEGREGDDTINGMGGVDRADYQNSRAGVTVNLANNTASDDGYGGTDTLLNIENVRGSRD 1487
Query: 197 APKGSLGNNI------YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G+ T+ G+D L Y D +
Sbjct: 1488 FNDSITGSAADNRLEGLGGNDTLDGGNGNDTLIGGFGNDSLVGGAGIDTATYADASGAVV 1547
Query: 251 SSIGGYEKNMTIAQH---TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
SI G + + + IE+++GS+ ND + GN++ N +GND +G +G DT
Sbjct: 1548 VSISGTGSASGGSGNDTLSGIENLIGSAYNDTLTGNTSANRIEGGAGNDSLNGGTGADTL 1607
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A Y I +++ DA+ +S V+ + +Q +
Sbjct: 1608 LGGAGDDQYTIDNL-GDVVIEDASAGTDTIVSSVDYVLGVNQENLRLTAAVGGNGTGNNL 1666
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
++ G ++ + + S G+D + I
Sbjct: 1667 ANLILASAGDNILDGSTGNDTVSYAYSGAGVTASLTSR----TATGGSGNDSVTNFENII 1722
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ + A D +N A L+ + G V
Sbjct: 1723 GSNYADSLIGNTLANRLEGAGGADSLNGGTGADTLIGGSGSD-QFYVENVGDIVIETGSD 1781
Query: 488 YLGSYDDLRNVFGSDRGAAARH--YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
L D + A + T G + L A + L
Sbjct: 1782 ALSGTDIVFAAISYALTANVENLRINTTGNVNATGNELDNVLFAGAGNNTLDGGDGIDTA 1841
Query: 546 LVQ 548
Sbjct: 1842 NYG 1844
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/402 (12%), Positives = 94/402 (23%), Gaps = 22/402 (5%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
T S I D G T++ + LG +Y+ V
Sbjct: 2 ATINGTSGNDDLIGTASDDTINGLAGNDTLIGGAGNDSLDGGLGTQDWANYSDAIAPVTV 61
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ + S + + + D + +L +
Sbjct: 62 NLA----TGAAIGGSGNDTLTGLENIFGSAFNDSLTGDANSNALRGEVGDDTLDGDA--G 115
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ ++ G+D D V + G + T IE
Sbjct: 116 DDYLTGGAGNDSLTGGIGNDTADYFYSNAVAGINASLATGVVTGGDGSDTL-----TGIE 170
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G++ +D ++G+S NV G+D +G G DT + I +
Sbjct: 171 NINGTNFSDNIVGDSNANVLQGQGGDDTLNGGGGNDTLL--GGAGADVITGGAGDDSLDG 228
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED-------LIQVIGQDVFES 382
+ SD L + + D + G D
Sbjct: 229 GLQTDAINFSDYNTLNYNGTTSALTINTAAGTASSSTDGNDTFVNFYRIRGGSGNDTITG 288
Query: 383 MK--HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
HF +F G D + N A
Sbjct: 289 DSALHFEQFEGGAGNDSLDGGAITDTLNGTNVNRLTYQNATAGVTVDLLAGTAVTTNSTL 348
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ + + + +G + + EG
Sbjct: 349 AGNSGTDTLANFNQVRGSSFNDTLLGSNTTALTEQFEGGLGD 390
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/416 (11%), Positives = 105/416 (25%), Gaps = 24/416 (5%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + + T R + + + +++ + + + A G
Sbjct: 1685 NDTVSYAYSGAGVTASLTSRTATGGSGNDSVTNFENIIGSNYADSLIGNTLANRLEGAGG 1744
Query: 134 LMHPGSYNGGYPVYGVDND--YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G + G + ++ V+ S D F + + +++ +
Sbjct: 1745 ADSLNGGTGADTLIGGSGSDQFYVENVGDIVIETGSDALSGTDIVFAAISYALTANVENL 1804
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ + GN +++ T+ G D + G N + +
Sbjct: 1805 RINTTGNVNATGN---ELDNVLFAGAGNNTLDGGDGIDTANYGFTSGGVNVSLAIASAQA 1861
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + IE++ GS+ ND + GNSA+NV G D
Sbjct: 1862 TGNSGSDTLL-----NIENLTGSNYNDTLQGNSADNVIEGGVGIDTL------------- 1903
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + D + +E L + ++L+ + L
Sbjct: 1904 TYAAASAAVNASLSTKTASGGEGNDTILRIENLIGSAFNDLLTGSSVANMLDGGEGNDTL 1963
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D G+D ++D
Sbjct: 1964 NGSSGNDTLSGGGGNDRLLGGAGQDSV-SGGSGADTFDFNALAETGITSLTWDSISDFSA 2022
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
G D A + +F + G+ + V D+
Sbjct: 2023 AAGDKIDLSTLDANTALAGNQAFSFIGTANFSAAGQVRYDAAAGMVYGSVDADADA 2078
>gi|308205902|gb|ADO19311.1| hypothetical protein Nfla_9703 [Nostoc flagelliforme str.
Sunitezuoqi]
Length = 334
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 54/165 (32%), Gaps = 18/165 (10%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
++ N I + + I N ++ ++++G+ GND +IG+ N++
Sbjct: 4 ISGTITDGNDIIVADAANDLIDALAGNDSVRGGDGNDTLIGNDGNDTLIGSVGNDILNGG 63
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN------------EHKQDFLSD 340
+GND G + DT + + + V ++ + D L
Sbjct: 64 AGNDTLLGGTRNDTL--TGGAGNDILNGGAGSDRVEESGNVNFTLSNTALIGNGTDSLVG 121
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+E + ++ L L G+ + +
Sbjct: 122 IESVFLTGGVGNNSLNASAFTL----GSVTLNGGDGKATSDDFRG 162
Score = 37.5 bits (85), Expect = 8.5, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 40/154 (25%), Gaps = 7/154 (4%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----FDSYLYL 405
I I+ A+ + + + G D ++G D D
Sbjct: 4 ISGTITDGNDIIVADAANDLIDALAGNDSVRGGDGNDTLIGNDGNDTLIGSVGNDILNGG 63
Query: 406 GSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
D L +D A + I +G + + + S+ LI D+ ++
Sbjct: 64 AGNDTLLGGTRNDTLTGGAGNDILNGGAGSDRVEESGNVNFTLSNTALIGNGTDSLVGIE 123
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
G F + D +
Sbjct: 124 SVFLT-GGVGNNSLNASAFTLGSVTLNGGDGKAT 156
>gi|46204238|ref|ZP_00050284.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
Length = 491
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 51/253 (20%), Positives = 79/253 (31%), Gaps = 40/253 (15%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
Y Y DL V+G D +H+ + G EGR + D+ L +
Sbjct: 1 FDPDFYLRYYPDL-AVLGDDRKVLRQHYLKHGKGEGRFPSADA---------LVAALEGE 50
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
GR P F A Y A +EDL +H+ FG EG
Sbjct: 51 G--------------GRLPKDFIAEHYRALYEDLAG-----MAEPWELAEHYLRFGRWEG 91
Query: 479 RFVTFDSYLYLGSYDDLR---NVFGSDRGAAARHYITHGVKEGRN-PDAFKALEYIASHE 534
R + Y Y+ + G A H + R P A+ +
Sbjct: 92 RAYRAELSAYELEYERMVAREAEAGRRSAAPPAESFAHLLAAARVLPGAWLDQFVLHEFV 151
Query: 535 DLI-NAFADAPDLVQAGKDHFSNFGYEEGRSIT----FNPDLYLTSYDDLWNVFGSDRSA 589
L P G F G + I+ F+P Y ++ + G+ +
Sbjct: 152 LLNEAWLPRPPVSRMEGLMAFLTAGVDRLAPISLRLRFDPSFYRSNNPNAPA--GTSDAE 209
Query: 590 AAQHYITHGMKEG 602
+H++ G+ G
Sbjct: 210 LYRHWLGRGIGRG 222
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 24/99 (24%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT----------------- 566
F Y+ + DL D ++ + H+ G EGR +
Sbjct: 1 FDPDFYLRYYPDL-AVLGDDRKVL---RQHYLKHGKGEGRFPSADALVAALEGEGGRLPK 56
Query: 567 -FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
F + Y Y+DL ++ A+HY+ G EGRA
Sbjct: 57 DFIAEHYRALYEDL--AGMAEPWELAEHYLRFGRWEGRA 93
>gi|332710198|ref|ZP_08430150.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332351037|gb|EGJ30625.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 847
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 52/378 (13%), Positives = 103/378 (27%), Gaps = 35/378 (9%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ I G+D++ G N + I G + + I + ++
Sbjct: 11 DNLEGLSENDIIQALDGNDIV----RGREGNDLIQGNLGNDVISGDQGDDVIQGNEGNDT 66
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKI----- 318
+ G G DV+ G + N+ + SGNDV G +G DTF ++ L +
Sbjct: 67 LFGGEGEDVIQGGAGNDRIWGDSGNDVLQGGAGNDTFRDSAGVNYFDGGEGLDTVEFQEL 126
Query: 319 --------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A D ++ L +ER + + + + + +
Sbjct: 127 INSGIKLNLVEGTASYTDDQSQEVTQTLISIERAVGTNFNDELIGNEADNSFSGLEGDDK 186
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDIT-----------FDSYLYLGSYDDLRNVFGSDR 419
+ G DVF F EG D + SY D ++ +
Sbjct: 187 YVGGAGNDVFRDSAGVNYFDGGEGLDTVDFQNLINSGIKLNLAEGTASYTDEQDQEVAQT 246
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ + + + +D A G ++ + G
Sbjct: 247 LISIERAVGTNFNDELTGNEVDNTFLGLEGDDKYVGGAGNDTFQDSGGVNYFDGGEGRDT 306
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
F+ + +D ++ + L +
Sbjct: 307 VDFFEFDFGVQVNIVEGTAISTDSNDQEIIQTLISIENVLGTNFDDELIGNGQGNTFLGY 366
Query: 540 FADAPDLVQAGKDHFSNF 557
+ + AG D F +
Sbjct: 367 NGNDKFIGGAGNDVFRDS 384
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 70/513 (13%), Positives = 130/513 (25%), Gaps = 41/513 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + DS + D +R G L + +
Sbjct: 68 FGGEGEDVIQGGAGNDRIWGDSGNDVLQGGAGNDTFRDSAGVNYFDGGEGLDTVEFQELI 127
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
N +D + T + + D G A S + K
Sbjct: 128 NSGIKLNLVEGTASYTDDQSQEVTQTLISIERAVGTNFNDELIGNEADNSFSGLEGDDKY 187
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G +DS + G D +D + ++L + S
Sbjct: 188 VGGA----------GNDVFRDSAGVNYFDGGEGLDTVDFQNLINSGIKLNLAEGTASYT- 236
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF------- 307
+ IE VG++ ND + GN +N F G+D + G +G DTF
Sbjct: 237 DEQDQEVAQTLISIERAVGTNFNDELTGNEVDNTFLGLEGDDKYVGGAGNDTFQDSGGVN 296
Query: 308 FYYAPSYLYKI----YRFENAIIVYDANEHKQD--------FLSDVERLRFADQCIDSVN 355
++ + + F + + + D L +E + + + +
Sbjct: 297 YFDGGEGRDTVDFFEFDFGVQVNIVEGTAISTDSNDQEIIQTLISIENVLGTNFDDELIG 356
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----------FDSYLY 404
Q + + I G DVF F EG D +
Sbjct: 357 NGQGNTFLGYNGNDKFIGGAGNDVFRDSAGVNYFDGGEGLDTVDFRNLINSGIKLNLAEG 416
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
GSY D ++ + + + + +D A
Sbjct: 417 TGSYTDEQDQEVAQTLISIERVFGTNFNDELTGNEVDNTFLGLEGDDKYVGGAGNDTFQD 476
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
G ++ + G F+ + +D ++ +
Sbjct: 477 SGGVNYFDGGEGRDTVDFFEFDFGVQVNLVEGTASSTDSNDQEITQTLISIENVFGTNFD 536
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
L + D L AG D F +
Sbjct: 537 DELIGNDQGNSFLGYNGDDKYLGGAGNDVFRDS 569
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/383 (14%), Positives = 102/383 (26%), Gaps = 35/383 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+DS + G D +D + + S+ I I
Sbjct: 285 GNDTFQDSGGVNYFDGGEGRDTVDFFEFDFGVQVNIVEGTAIST--DSNDQEIIQTLISI 342
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKI--- 318
E+V+G++ +D +IGN N F +GND F G +G D F ++ L +
Sbjct: 343 ENVLGTNFDDELIGNGQGNTFLGYNGNDKFIGGAGNDVFRDSAGVNYFDGGEGLDTVDFR 402
Query: 319 -----------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ E Q L +ER+ + + + +
Sbjct: 403 NLINSGIKLNLAEGTGSYTDEQDQEVAQ-TLISIERVFGTNFNDELTGNEVDNTFLGLEG 461
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH-- 425
+ + G D F+ F EGRD G +L S + +
Sbjct: 462 DDKYVGGAGNDTFQDSGGVNYFDGGEGRDTVDFFEFDFGVQVNLVEGTASSTDSNDQEIT 521
Query: 426 ---------YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ T+ E D + + + + G ++F
Sbjct: 522 QTLISIENVFGTNFDDELIGNDQGNSFLGYNGDDKYLGGAGNDVFRDSAGVNYFDGGEGL 581
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ + +D ++ + L
Sbjct: 582 DTVNFQNLINSGIKLNLAEGTASYTDEQDQEVAQTLISIERVFGTNFNDELIGNEVDNTF 641
Query: 537 INAFADAPDLVQAGKDHFSNFGY 559
+ D + AG D F + G
Sbjct: 642 LGLEGDDKYVGGAGNDTFQDSGG 664
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/375 (13%), Positives = 101/375 (26%), Gaps = 32/375 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+DS + G D +D + ++L + S + I
Sbjct: 377 GNDVFRDSAGVNYFDGGEGLDTVDFRNLINSGIKLNLAEGTGSYT-DEQDQEVAQTLISI 435
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKI--- 318
E V G++ ND + GN +N F G+D + G +G DTF ++ +
Sbjct: 436 ERVFGTNFNDELTGNEVDNTFLGLEGDDKYVGGAGNDTFQDSGGVNYFDGGEGRDTVDFF 495
Query: 319 -YRFENAIIVYDANEHKQD--------FLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ F + + + D L +E + + + + Q + +
Sbjct: 496 EFDFGVQVNLVEGTASSTDSNDQEITQTLISIENVFGTNFDDELIGNDQGNSFLGYNGDD 555
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDIT-----------FDSYLYLGSYDDLR-NVFGS 417
+ G DVF F EG D + SY D +
Sbjct: 556 KYLGGAGNDVFRDSAGVNYFDGGEGLDTVNFQNLINSGIKLNLAEGTASYTDEQDQEVAQ 615
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ R + T+ E + + + + + G ++F +
Sbjct: 616 TLISIERVFGTNFNDELIGNEVDNTFLGLEGDDKYVGGAGNDTFQDSGGVNYFDGGEGRD 675
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
+ +D ++ + L L+
Sbjct: 676 TVDFQNLINSGIKLNLAEGTGSYTDEQDQEVAQTLISIERAVGTNFNDELIGNGEDNILL 735
Query: 538 NAFADAPDLVQAGKD 552
D AG D
Sbjct: 736 GLDGDDTITGGAGND 750
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 66/211 (31%), Gaps = 23/211 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+DS + G D ++ + ++L + S + I
Sbjct: 562 GNDVFRDSAGVNYFDGGEGLDTVNFQNLINSGIKLNLAEGTASYT-DEQDQEVAQTLISI 620
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKI--- 318
E V G++ ND +IGN +N F G+D + G +G DTF ++ +
Sbjct: 621 ERVFGTNFNDELIGNEVDNTFLGLEGDDKYVGGAGNDTFQDSGGVNYFDGGEGRDTVDFQ 680
Query: 319 -----------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ E Q L +ER + + + + +IL
Sbjct: 681 NLINSGIKLNLAEGTGSYTDEQDQEVAQ-TLISIERAVGTNFNDELIGNGEDNILLGLDG 739
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + G DV ++ G D
Sbjct: 740 DDTITGGAGNDVIKTGDGNNTIDSGSGVDTI 770
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 48/320 (15%), Positives = 87/320 (27%), Gaps = 31/320 (9%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I L T + ++ G +N I + V G GND++ GN N+V G+DV G+
Sbjct: 3 IILGTLNEDNLEGLSENDIIQALDGNDIVRGREGNDLIQGNLGNDVISGDQGDDVIQGNE 62
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT F I ++ + +L
Sbjct: 63 GNDTLF--GGEGEDVIQGGAGNDRIWGDS--------------------------GNDVL 94
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSE--GRDITFDSYLYLGSY-DDLRNVFGSDR 419
+ A + G + F+ + E I + SY DD
Sbjct: 95 QGGAGNDTFRDSAGVNYFDGGEGLDTVEFQELINSGIKLNLVEGTASYTDDQSQEVTQTL 154
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ R T+ E +A + + + + + G ++F +
Sbjct: 155 ISIERAVGTNFNDELIGNEADNSFSGLEGDDKYVGGAGNDVFRDSAGVNYFDGGEGLDTV 214
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
+ +D ++ + L +
Sbjct: 215 DFQNLINSGIKLNLAEGTASYTDEQDQEVAQTLISIERAVGTNFNDELTGNEVDNTFLGL 274
Query: 540 FADAPDLVQAGKDHFSNFGY 559
D + AG D F + G
Sbjct: 275 EGDDKYVGGAGNDTFQDSGG 294
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 23/181 (12%), Positives = 52/181 (28%), Gaps = 32/181 (17%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS---------------- 252
+DS + G D +D + ++L + S
Sbjct: 655 GNDTFQDSGGVNYFDGGEGRDTVDFQNLINSGIKLNLAEGTGSYTDEQDQEVAQTLISIE 714
Query: 253 --IGGYEKNMTIAQHT--------VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+G + I +++ G +GNDV+ NN SG D + +
Sbjct: 715 RAVGTNFNDELIGNGEDNILLGLDGDDTITGGAGNDVIKTGDGNNTIDSGSGVDTIELGN 774
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G +T K+ F+ + + ++ ++ ++ + +
Sbjct: 775 GNNTIALEEGEGHDKVINFQLGLTRFGVSDASTLT------FEQSNGSVNIIAADGDLLA 828
Query: 363 E 363
Sbjct: 829 N 829
>gi|150513|gb|AAA25543.1| leukotoxin membrane protein (LktA) [Mannheimia haemolytica]
Length = 953
Score = 71.0 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 46/331 (13%), Positives = 100/331 (30%), Gaps = 28/331 (8%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
AD L++ + T + F L P + R G++ + L
Sbjct: 507 ADKLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITKLNINRV 566
Query: 74 SI------HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F +N D+ + + + + G G + + E
Sbjct: 567 DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGTTE 626
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
I G G Y +D E + +V + + T +V +
Sbjct: 627 IDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VETGKALHEVTSTHTALVGN 684
Query: 188 IVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++ + + G Y + K ++ I + +D+ +
Sbjct: 685 REEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFN--------- 729
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + TI + + + G G+D++ G + ++ GND+ G G D
Sbjct: 730 ----DAFNGGDGVDTIYGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKGDDI 785
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
F + I + + ++ + +D
Sbjct: 786 FVHRKGDGNDIITDSDGNDKLSFSDSNLKDL 816
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 61/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I G+D V
Sbjct: 571 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-IAKLGEGDDNVF 619
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 620 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKALHEVTSTHT 679
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L VE + K +
Sbjct: 680 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVD 739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 740 TIYGNDGNDRLFGGKGDDILDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRKGD 792
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + D L + S+
Sbjct: 793 GNDIITDSDGNDKLSFSDSN 812
>gi|115758054|ref|XP_792649.2| PREDICTED: similar to matrix metalloproteinase 16
[Strongylocentrotus purpuratus]
gi|115965029|ref|XP_001193437.1| PREDICTED: similar to matrix metalloproteinase 16
[Strongylocentrotus purpuratus]
Length = 562
Score = 70.6 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 56/204 (27%), Gaps = 56/204 (27%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH---- 76
W + I Y T +++L + + A WS V L F E H
Sbjct: 172 YKWDSSQITYSLVNFPTR-GGIKLSDL----RNTIKRAFEVWSDVTPLVFTELHGHEVNQ 226
Query: 77 SDIKFIS------------------SNNGYVCTP-RYDSRYFMEINFDKADVWRYGIGKG 117
+ ++ + + +P +I+FD DV+ G
Sbjct: 227 AMVRIAFMKGRHSHDLEHPIFDGPNGDLAHAFSPKSGWGEVNGDIHFDDDDVFTLGNNDR 286
Query: 118 TI-LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
A HEIGHALGL H M F D
Sbjct: 287 GYNFFQTAAHEIGHALGLDHSND------------PEALMWPHYHFMRDFELPD------ 328
Query: 177 FGYCATPMVSDIVAVQKIYGAPKG 200
DI VQ +YG
Sbjct: 329 ---------DDIRGVQALYGTKTS 343
>gi|240142070|ref|YP_002966580.1| hypothetical protein MexAM1_META2p0382 [Methylobacterium extorquens
AM1]
gi|240012014|gb|ACS43239.1| Hypothetical protein MexAM1_META2p0382 [Methylobacterium extorquens
AM1]
Length = 448
Score = 70.6 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 50/372 (13%), Positives = 93/372 (25%), Gaps = 24/372 (6%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ D T++ SY + + + G A V + +
Sbjct: 13 DAASDTVSEAAGAGIDEVRTTLASYTLGANVEYLSYLGAGAFTGVGNSLDNMLTGNGGND 72
Query: 201 S----LGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-- 251
S GN++Y G D +D + S +
Sbjct: 73 SLTGGAGNDVYYGLAGNDFFFGGAGSDAHNGGDGFDTVDYSAATQSVRVDLFAPGSNTGD 132
Query: 252 ----------SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
G N I+ V GND + G ++ +G D +G
Sbjct: 133 AAGDTFMFIEQFGLSAYNDIFVGSAGIDYVYAQGGNDTLNGGGGDDWLSGGAGADQLNGQ 192
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G DT Y S + R A + + K D + +ER + V
Sbjct: 193 DGFDTADYTGASAAVTVDRVTAANSL---GDAKGDTYASIERFHLSQFNDRFVGSSADEY 249
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + ++ G D G D D A
Sbjct: 250 IYGNGGNDTILAGDGNDWLIGGAGADALTGGNGYDFASYFSAGAAVVIDRVTASNGAGEA 309
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
A ++ ++ + ++ S + + L+ G + F + +
Sbjct: 310 AGDTFV--TIEAFQLTASYGDRFVGGSGAETVFGGGGNDTLIGNGGNDFLDGEEQNDMLT 367
Query: 482 TFDSYLYLGSYD 493
Y+
Sbjct: 368 GGAGADTFAFYE 379
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/383 (12%), Positives = 86/383 (22%), Gaps = 33/383 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ S ++E + R L ++ ++ + S F N
Sbjct: 8 DIYYVDAASDTVSEAAGAGIDEVRTTLASYTLGANVEY--LSYLGAGAFTGVGNSLDNML 65
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ DV+ G G V
Sbjct: 66 TGNGGNDSLTGGAGNDVYYGLAGNDFFFGGAGSDAHNGGDGFDTVDYSAATQSVRVDLFA 125
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+++ + ++ + + A D V Q G G +
Sbjct: 126 PGSNTGDAAGDTFMFIEQFGLSAYNDIFVGSAGIDYVYAQ---GGNDTLNGG---GGDDW 179
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE------------SWSSIGGYEKNM 260
+ G D D T + S + N
Sbjct: 180 LSGGAGADQLNGQDGFDTADYTGASAAVTVDRVTAANSLGDAKGDTYASIERFHLSQFND 239
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ E + G+ GND ++ N+ +G D G +G D Y++ I R
Sbjct: 240 RFVGSSADEYIYGNGGNDTILAGDGNDWLIGGAGADALTGGNGYDFASYFSAGAAVVIDR 299
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFA----------DQCIDSVNVKQRSILEYTASYED 370
+ A E D +E + L +
Sbjct: 300 VTASN---GAGEAAGDTFVTIEAFQLTASYGDRFVGGSGAETVFGGGGNDTLIGNGGNDF 356
Query: 371 LIQVIGQDVFESMKHFYEFGLSE 393
L D+ F E
Sbjct: 357 LDGEEQNDMLTGGAGADTFAFYE 379
Score = 40.9 bits (94), Expect = 0.67, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 50/181 (27%), Gaps = 5/181 (2%)
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF-ADQCIDSVNV 356
G +G D ++ A S V ++VE L + V
Sbjct: 1 MAGGAGNDIYYVDAASDTVSEAAGAGIDEVRT-TLASYTLGANVEYLSYLGAGAFTGVGN 59
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
++L + L G DV+ + F G D + D
Sbjct: 60 SLDNMLTGNGGNDSLTGGAGNDVYYGLAGNDFFFGGAGSDAHNGGDGF--DTVDYSAATQ 117
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
S R G G + F ++++ D+ A + G + N G
Sbjct: 118 SVRVDLFAPGSNTGDAAG-DTFMFIEQFGLSAYNDIFVGSAGIDYVYAQGGNDTLNGGGG 176
Query: 477 E 477
+
Sbjct: 177 D 177
Score = 39.8 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 35/265 (13%), Positives = 62/265 (23%), Gaps = 20/265 (7%)
Query: 83 SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
+ Y + D G G + ++ G
Sbjct: 144 FGLSAYNDIFVGSAGIDYVYAQGGNDTLNGGGGDDWLSGGAGADQLNGQDGFDTADYTGA 203
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
V N +Y + + + G L
Sbjct: 204 SAAVTVDRVTAANSLGDAKGDTYASIERFHLSQFNDRFVGSSADEY---IYGNGGNDTIL 260
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + G D G + + + + +TI
Sbjct: 261 AGD---GNDWLIGGAGADALTGGNGYDFASYFSAGAAVVIDRVTASNGAGEAAGDTFVTI 317
Query: 263 A-------------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-F 308
+ E+V G GND +IGN N+ ND+ G +G DTF F
Sbjct: 318 EAFQLTASYGDRFVGGSGAETVFGGGGNDTLIGNGGNDFLDGEEQNDMLTGGAGADTFAF 377
Query: 309 YYAPSYLYKIYRFENAIIVYDANEH 333
Y + F + ++ +
Sbjct: 378 YERGFGKDTVSDFVSGDVIEFSTSA 402
>gi|227885274|ref|ZP_04003079.1| RTX-toxin family pore-forming toxin [Escherichia coli 83972]
gi|227837800|gb|EEJ48266.1| RTX-toxin family pore-forming toxin [Escherichia coli 83972]
gi|307556489|gb|ADN49264.1| C-terminal part of hemolysin HlyA [Escherichia coli ABU 83972]
Length = 865
Score = 70.6 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 44/151 (29%), Gaps = 25/151 (16%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + N + +++ G +G+D + G N+ +GN
Sbjct: 573 FGSKFTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGN 632
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D S +V L
Sbjct: 633 NYLNGGDGDDELQVQGNS-----------------------LAKNV--LSGGKGNDKLYG 667
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ +L+ + L G D++ + +
Sbjct: 668 SEGADLLDGGEGNDLLKGGYGNDIYRYLSGY 698
Score = 37.1 bits (84), Expect = 9.5, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 79/287 (27%), Gaps = 24/287 (8%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY------APSYLYKIYRFENAIIV 327
G+D V ++ + + G+DV DT + + Y + R +
Sbjct: 458 GDGDDKVFLSAGSANIYAGKGHDVVYY-DKTDTGYLTIDGTKATEAGNYTVTRVLGGDVK 516
Query: 328 YDAN---EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E + E+ ++ +N K + + S E+LI D F K
Sbjct: 517 VLQEVVKEQEVSVGKRTEKTQYRSYEFTHINGKNLTETDNLYSVEELIGTTRADKFFGSK 576
Query: 385 HFYEFGLSEGRD----ITFDSYLYLGSYDDLRNV-------FGSDRGAAARHYITHGVKE 433
F ++G D + LY +D + +G D +
Sbjct: 577 FTDIFHGADGDDHIEGNDGNDRLYGDKGNDTLSGGNGDDQLYGGDGNDKLIGGAGNNYLN 636
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV---TFDSYLYLG 490
G + D ++ + +++++ L + G D Y YL
Sbjct: 637 GGDGDDELQVQGNSLAKNVLSGGKGNDKLYGSEGADLLDGGEGNDLLKGGYGNDIYRYLS 696
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
Y + + + Y A L
Sbjct: 697 GYGHHIIDDDGGKDDKLSLADIDFRDVAFRREGNDLIMYKAEGNVLS 743
>gi|256829656|ref|YP_003158384.1| hemolysin-type calcium-binding protein [Desulfomicrobium baculatum
DSM 4028]
gi|256578832|gb|ACU89968.1| Hemolysin-type calcium-binding region [Desulfomicrobium baculatum DSM
4028]
Length = 4800
Score = 70.6 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 53/341 (15%), Positives = 94/341 (27%), Gaps = 19/341 (5%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP--GSYN 141
NN DS + G G T++ + G G
Sbjct: 746 GNNTLYGGAGNDSLSVNLSYINYRSFLDGGDGDDTLIGGFGRDTLYGGDGNDSMIAGGIY 805
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G +D ND+ L+ + + D G + + +YG +
Sbjct: 806 DGGNNGVMDGGAGNDTLLSDGGNDTLYGRDGNDFLDGGTNSDHLIGGDGNDTLYGGDASN 865
Query: 202 LGN-----------NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ + + T+Y G+D L + + Y
Sbjct: 866 IEWIPGYYTDWDLLDGGAGDDVLDGGRGADTLYGGDGNDSLYGGVSTPYQPYKTWLRADN 925
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N T+ ++++G ND ++G N+V +G+D G G DT
Sbjct: 926 DLLDGGAGNDTLDGGVGNDTLMGGEDNDSMMGGDGNDVLMGDAGDDTLVGGVGKDTLNGG 985
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI-----DSVNVKQRSILEYT 365
A+ + + + S E AD I + + L
Sbjct: 986 EDVNTVDYSASTKAVRIDLNQQDGKAAQSGGEAENHADGDILQNIRNVIGTAGADTLIGD 1045
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L G D+ + G D+ S L
Sbjct: 1046 SQANVLDGRDGNDIITAGAG-DTVVGGAGNDVLHSSDTALD 1085
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 63/371 (16%), Positives = 107/371 (28%), Gaps = 37/371 (9%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY--- 140
+ G+ D M D D+ G+G ++ N + LG
Sbjct: 4207 GSYGHDTLIGNDQGNDM-NGLDGNDLMIGGVGNDSLWGVNNNDTLEGGLGEDLIWGGMDY 4265
Query: 141 ---NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+ GV D + V +D +D + + I
Sbjct: 4266 DIASYANAASGVKVDLRIQNVKGWVQQGAGEEDGDEFYYMDGLYGSAYNDTLTGRDIDQL 4325
Query: 198 PKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
S N + + + G D D +L +DL+ + + GG
Sbjct: 4326 GFMSAHNRLEGREGDDILAGLAGADILDGGDGIDTADYSL-SEANVRVDLSQATAQTGGG 4384
Query: 256 YEKNMTIAQHTV-------------------IESVVGSSGNDVVIGNSANNVFFESSGND 296
TI IE+V+GSS +D +IG+ NV G D
Sbjct: 4385 SVMTETILDRNGDEWKIIYTGNHAAGDVLIGIENVIGSSYDDTLIGDGNANVLSGLGGAD 4444
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
DG G+DT Y A + Y + + D L+ +E + ++
Sbjct: 4445 SIDGGGGIDTADYSASGAAVTMDLRYGT---YKGGDAEGDSLTGIENVIGSNFNDTITGS 4501
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDL 411
+ L + L G D + + +++ D G+ D L
Sbjct: 4502 NGSNYLYGMDGNDALAAAYGADTLDGGAGNDTLRGARDKNLLLGGDGDDRLYGQGNNDTL 4561
Query: 412 RNVFGSDRGAA 422
G+D
Sbjct: 4562 AGGAGADLLDG 4572
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/483 (15%), Positives = 133/483 (27%), Gaps = 26/483 (5%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
N + + I D D R I T+ I G +
Sbjct: 3373 GNDQGNDMYGNGGNNLLIGGDGNDSLRGDINDDTLDGGLGADLIW---GWKGDDIASYEN 3429
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
GV+ D + +D +D + + S+ N
Sbjct: 3430 AASGVNVDLRIQNVNGLTQQGNGEEDGDELWYMDGLYGSAFNDTLTGRDTDDPDYMSIHN 3489
Query: 205 NIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN---YIDLNTESWSSIGGYEKN 259
+ + T+ G+D D + G + I + S G +
Sbjct: 3490 LLQGRGGDDILSGLAGNDTLDGGTGNDTADYSTSGSGVHVVLTIQDGVTAQSGTGDAAGD 3549
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI- 318
+ I IE+V+GSS +D +IG+S NV G D DG G+DT Y A + I
Sbjct: 3550 VLI----GIENVIGSSYDDTLIGDSNANVLSGLGGADSIDGGGGIDTVDYSASTAGVHID 3605
Query: 319 ----YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
D N D L +++ + + ++L + +
Sbjct: 3606 LSRQDGLTAQSGGADGNHADGDILRNIQNVIGSSYNDTLTGDIGNNVLSGLGGADSINGG 3665
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYL-----GSYDDLRNVFGSDRGAAARHYITH 429
+ + + R + D L+N+ + I
Sbjct: 3666 GAINTVDYSASTAGVHIDLSRQDGLTAQSGGADGNHADGDILQNIQNVIGSSYNDTLIGD 3725
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G + D ++ A + + G EG +T ++
Sbjct: 3726 GNANVLSGLGGADSIVGGDGIDTVDYRASNEAVTMDLRYGTCKGGDAEGDSLTGIENVFG 3785
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
+++D + + + G L+ A ++ L A L
Sbjct: 3786 SNFNDTI----TGSNGSNYLFGMDGNDSLAAAYGDDTLDGGAGNDTLRGARDKNLLLGGD 3841
Query: 550 GKD 552
G D
Sbjct: 3842 GND 3844
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 66/530 (12%), Positives = 130/530 (24%), Gaps = 49/530 (9%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ Y T D + AD G T+ + + L
Sbjct: 3637 GSSYNDTLTGDIGNNVLSGLGGADSINGGGAINTVDYSASTAGVHIDL---SRQDGLTAQ 3693
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
N + D + + + + GA G+
Sbjct: 3694 SGGADGNHADGDILQNIQNVIGSSYNDTLIGDGNANV---------LSGLGGADSIVGGD 3744
Query: 205 NIYKIEVQQKDSPFIQTIY-------DSGGDDLLDLTL-IGGVKNYIDLNTESWSSIGGY 256
I ++ + + + D+ GD L + G N + + + G
Sbjct: 3745 GIDTVDYRASNEAVTMDLRYGTCKGGDAEGDSLTGIENVFGSNFNDTITGSNGSNYLFGM 3804
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FY 309
+ N ++A +++ G +GND + G N+ GND G DT
Sbjct: 3805 DGNDSLAAAYGDDTLDGGAGNDTLRGARDKNLLLGGDGNDSLYGQGNNDTLDGEDGSDLL 3864
Query: 310 YAPSYLYKIYRFENAIIVYD-----------------ANEHKQDFLSDVERLRFADQCID 352
+ + + V + + D L+ +E + ++
Sbjct: 3865 DGGTGADSLIGGDGIDTVDYRASNEAVTMDLRYGTCKGGDAEGDSLTGIENVFGSNFNDT 3924
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGS 407
+ L + L G D + ++ +++ D G+
Sbjct: 3925 ITGSNGSNYLFGMDGNDSLAAAYGDDTLDGGAGNDTLWGAKDKNLLLGGDGDDRLYGQGN 3984
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
D L G+D T A A LV + +
Sbjct: 3985 NDTLAGGAGADLLDGGTGVDTADYSANSAWVNIDMSLATAQTGGGDGNHALGDTLVSIEQ 4044
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
+N + + + G + E P++
Sbjct: 4045 IIGTNDTTHGDVLIGDGGDNLISGGAGDDTIHGGAGFDSILGGDGDDYLECYLPNSGMQE 4104
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD 577
Y + LI + + G I N + SY+
Sbjct: 4105 AYFSYRNKLIGGAGNDTLVGSNSDGDDILCGGMGADRIIGNGISTIASYE 4154
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 75/298 (25%), Gaps = 22/298 (7%)
Query: 204 NNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES---WSSIGGYEK 258
+ +Y + G+D L +I + W + G
Sbjct: 567 DTLYGRDGNDFLDGGTNSDHLIGGDGNDTL-YGGDASNIEWILFSPGYYTDWDLLDGGAG 625
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSA-------------NNVFFESSGNDVFDGSSGLD 305
+ + +++ G GND + G + N++ +GND DG +G D
Sbjct: 626 DDVLDGGRGADTLYGGDGNDSLYGGDSTPYQPYKTWLRADNDLLDGGAGNDTLDGGAGKD 685
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS-ILEY 364
T + + + + + + DS++ + L
Sbjct: 686 TLM--GGEDNDSMMGGDGNDSMMGDGGNDTLISEAGHDILYGGDGDDSLDGGDGNDTLHG 743
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
L G D + + D+ + D L G+D A
Sbjct: 744 GQGNNTLYGGAGNDSLSVNLSYINYRSFLDGGDGDDTLIGGFGRDTLYGGDGNDSMIAGG 803
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
Y L ++ L + DH + +
Sbjct: 804 IYDGGNNGVMDGGAGNDTLLSDGGNDTLYGRDGNDFLDGGTNSDHLIGGDGNDTLYGG 861
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 54/348 (15%), Positives = 88/348 (25%), Gaps = 19/348 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKA--DVWRYGIGKGTILSHNALHEIGHALG 133
D T D A D G G T+ + G
Sbjct: 2020 GGDGNDSLDGGYDRDTMDGGDGNDSLYGGDGAFYDNMNGGAGDDTLDGGAGEDFLLGGDG 2079
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ D ++ + GY M
Sbjct: 2080 NDSLYGGERNFADTLDGGDGDDTLDGGEYRDSLLGGGGNDSLDGGYERDTMDGGD-GNDS 2138
Query: 194 IYGAPKGSLGN-NIYKIEVQQKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYIDL 245
+YG N N + + G+D L TL GG +
Sbjct: 2139 LYGGDGAFYDNMNGGAGDDTLDGGAGQDFLLGGDGNDSLYGGEMNFADTLDGGDGDDTLD 2198
Query: 246 NTESWSSIGGYEKNMTIAQH--TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
E S+ G + N ++ +++ G +GND + G + +GNDV G +G
Sbjct: 2199 GGEYRDSLLGGDGNDSLYGGNEAWNDTLDGGAGNDTLDGGEGKDSLDGGAGNDVLIGGAG 2258
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI-----DSVNVKQ 358
D + A+ + + + S E AD I + +
Sbjct: 2259 ADFIDGGSGVNTVDYSASTKAVRIDLNQQDGKAAQSGGEAENHADGDILQNIRNVIGTAG 2318
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
L + L G D+ + G D+ S L
Sbjct: 2319 ADTLIGDSQANVLDGRDGNDIITAGAG-DTVVGGAGNDVLHSSDTALD 2365
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 60/400 (15%), Positives = 102/400 (25%), Gaps = 35/400 (8%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYID 244
A+ + G + ++ K S F + G ++L D TL GG N
Sbjct: 375 AMAQSGGGERNHAAGDVLKGIENLTGSNFNDVLIGDGQANILNGLVGDDTLYGGAGNDSM 434
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + S+ G N T+ + + G G+D + G N+ GN+ G +G
Sbjct: 435 MGGDGNDSMMGDGGNDTLISEAGHDILYGGGGDDSLDGGDGNDTLHGGQGNNTLYGGAGN 494
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV-----------------ERLRFA 347
D+ Y+ + +D L E +
Sbjct: 495 DSLSVNLSYINYRSFLDGGDGDDTLIGGFGRDTLYGGDGNDSMIAGGMYEGGHHEVMDGG 554
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYL 405
++ L + L D + +I S Y
Sbjct: 555 AGNDTLLSDGGNDTLYGRDGNDFLDGGTNSDHLIGGDGNDTLYGGDASNIEWILFSPGYY 614
Query: 406 GSYDDLRNVFGSD----RGAAARHYITHGVKEGRNPDAFKALEY----IASHEDLINAFA 457
+D L G D A Y G D+ Y A ++ L
Sbjct: 615 TDWDLLDGGAGDDVLDGGRGADTLYGGDGNDSLYGGDSTPYQPYKTWLRADNDLLDGGAG 674
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ GKD + + + D N Y G
Sbjct: 675 NDTLDGGAGKDTLMGGEDNDSMMGGDGNDSMM---GDGGNDTLISEAGHDILYGGDGDDS 731
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
D L + L + V ++ +F
Sbjct: 732 LDGGDGNDTLHGGQGNNTLYGGAGNDSLSVNLSYINYRSF 771
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 53/379 (13%), Positives = 94/379 (24%), Gaps = 40/379 (10%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
VV +T E + + + Y R AD G+G + H +
Sbjct: 1717 VVKITGTEGPDDLTVGWNFDDPQYTFDARGLGGDDTLRGGVHADTLDGGLGTDAVDYHAS 1776
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+ L L G +N D + + D G
Sbjct: 1777 ATWVNVDLNLA------TAQIDGGTNNHAAGDVLTGIEILTGTNDTTHGDVLSGNGLNNE 1830
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+ ++ +YG + + G D+ D +D
Sbjct: 1831 LHGLLGDDSLYG----------FAGNDLLHGGAGADLLDGGTGTDMADY-HDSATWVNVD 1879
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN---------SANNVFFESSGN 295
L + GG + IE+V GS +D + GN + + G
Sbjct: 1880 LTLATAQVGGGEGNHALGDTLVSIENVTGSQYDDSITGNGWHNVLDGGDGADTLYGGGGY 1939
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-------NEHKQDFLSDVERLRFAD 348
D +G +G D+ + ++ + + D L ER
Sbjct: 1940 DTLNGGAGNDSLYGGDGAFYDNMNGGAGDDTLDGGAGHDFLLGGDGNDSLYGGERNFADT 1999
Query: 349 QCIDSVNVKQR-----SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ L + L +D + +G +D+
Sbjct: 2000 LDGGDGDDTLDGGEDRDSLLGGDGNDSLDGGYDRDTMDGGDGNDSLYGGDG--AFYDNMN 2057
Query: 404 YLGSYDDLRNVFGSDRGAA 422
D L G D
Sbjct: 2058 GGAGDDTLDGGAGEDFLLG 2076
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 48/329 (14%), Positives = 94/329 (28%), Gaps = 18/329 (5%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
DD D T L + ++ G ++ + + ++G GND + G+ ++
Sbjct: 3346 DDATDATGDILTGIVNALGSYGHDTLIGNDQGNDMYGNGGNNLLIGGDGNDSLRGDINDD 3405
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKI---YRFENAIIVYDANEHKQDFLSDVERL 344
G D+ G G D Y + + + N + E D L ++ L
Sbjct: 3406 TLDGGLGADLIWGWKGDDIASYENAASGVNVDLRIQNVNGLTQQGNGEEDGDELWYMDGL 3465
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
+ +Y + + L G D+ + G D S
Sbjct: 3466 YGSAFNDTLTGRDTDDP-DYMSIHNLLQGRGGDDILSGLAGNDTLDGGTGNDTADYSTSG 3524
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
G + L G + + +S++D + ++A L
Sbjct: 3525 SGVHVVLTIQDGVTAQSGTG-------DAAGDVLIGIENVIGSSYDDTLIGDSNANVLSG 3577
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE-GRNPDA 523
+G + G D+ Y S + G A+ G G
Sbjct: 3578 LGGADSIDGGG------GIDTVDYSASTAGVHIDLSRQDGLTAQSGGADGNHADGDILRN 3631
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKD 552
+ + + ++ L + G D
Sbjct: 3632 IQNVIGSSYNDTLTGDIGNNVLSGLGGAD 3660
Score = 54.4 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 77/297 (25%), Gaps = 27/297 (9%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G + G + + + + D S + D Q G
Sbjct: 1310 HGLAGNDTLRGGAGNDTLMGGAGADLLDGGAGSNTADYSSSTTGVYVNLDQNGAQTTGGG 1369
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ T+ + L G + + N ++ IG
Sbjct: 1370 TSSDAWGDTLTGITTLIGGIGNDTLIGFDFGGPAAMLLGGDGDDVLHANAVTYYYIGASN 1429
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP----- 312
T+ +++ G+ G D +IG + N+ +G D +G G+DT Y
Sbjct: 1430 ---TLDGGAGNDTLGGAGGRDSLIGGTGNDWLHGWTGADTLNGGDGIDTVDYADAYTWVK 1486
Query: 313 -SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA------------------DQCIDS 353
+ N+ D L +E +R +
Sbjct: 1487 IDLNLTGAQGLGGRDGEGHNDALDDVLVSIENVRGSRYGDSLVGNAEDNKLEGLAGNDTL 1546
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
L+ ++ L +G D + G ++ + L + D
Sbjct: 1547 DGRSGNDTLDGATGHDTLDGGVGNDSIIGGEGNDLIIAGAGDNVDGGAGLDVLKSTD 1603
Score = 54.4 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 71/253 (28%), Gaps = 44/253 (17%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D + V + P+ + + + T+ G D +D +DLN
Sbjct: 1205 DDLTVGWNFDDPQYTFDARGLGGDDTLRGGVHADTLDGGLGTDAVDY-HASATWVKVDLN 1263
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSS---------------------GNDVVIGNSA 285
+ GG + T IE++ GS+ GND + G +
Sbjct: 1264 LATAQVGGGDGNHALGDVLTGIENLTGSNDTTHGDVLSGNALNNELHGLAGNDTLRGGAG 1323
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK---QDFLSDVE 342
N+ +G D+ DG +G +T Y + + + +N D L+ +
Sbjct: 1324 NDTLMGGAGADLLDGGAGSNTADYSSSTTGVYVNLDQNGAQTTGGGTSSDAWGDTLTGIT 1383
Query: 343 RLR------------FADQCIDSVNVKQRSIL-------EYTASYEDLIQVIGQDVFESM 383
L F + +L Y + L G D
Sbjct: 1384 TLIGGIGNDTLIGFDFGGPAAMLLGGDGDDVLHANAVTYYYIGASNTLDGGAGNDTLGGA 1443
Query: 384 KHFYEFGLSEGRD 396
G D
Sbjct: 1444 GGRDSLIGGTGND 1456
Score = 50.6 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 64/421 (15%), Positives = 112/421 (26%), Gaps = 48/421 (11%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D + V + P+ + + + T+ G D +D +DLN
Sbjct: 2485 DDLTVGWNFDDPQYTFDARGLGGDDTLRGGVHADTLDGGAGVDTVDY-HASATWVNVDLN 2543
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSS---------------------GNDVVIGNSA 285
+ GG + T IE++ G++ GND +
Sbjct: 2544 LATAQVGGGDGNHALGDVLTGIENLTGTNDTLHGDVLTGNTGNNLLSGLDGNDTINAGLG 2603
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSY--LYKIYRFENAIIVYDANEHKQDFLSDVER 343
N+ +G D+ DG +G D Y+ + + D N + D L+ +E
Sbjct: 2604 NDTLVGGAGADLLDGGAGTDMADYHDSTTWVNVDLSLATAQTGGGDGNHAQDDVLTGIEN 2663
Query: 344 LRFADQ---CIDSVNVKQRSILEYTASYEDLIQVIGQDVFE---------------SMKH 385
L + + + A + + +D S+
Sbjct: 2664 LIGTNDLAHGDVLTGNGVSNFMNGGAGNDTIYGGNARDTIYGGDGDDWIDGGVHDDSIYD 2723
Query: 386 FYEFGLSEGRDITFD----SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
G D + +Y G DD + D + R G D
Sbjct: 2724 DDSIYGGAGNDTIYGGSAQDTIYGGDGDDSLVGYNPDGTSDRRQDTLIGGWGNDTLDGSH 2783
Query: 442 ALEYIASHEDLINAFADA--PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
L+ I H L+ ++ G + YL L D +
Sbjct: 2784 ELDIIFEHTVLVGGSGADRIIGNGTNTFANYQLTGHGDFDVSYQGVYLDLNIQDGVTAQT 2843
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
G G A I G+ + L + + + G D G
Sbjct: 2844 GKSGGDDATGDILTGIVHAAGSNGSDTLIGNHQANAMAGNDGNDLMIGGDGDDILYGHGG 2903
Query: 560 E 560
Sbjct: 2904 N 2904
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 55/338 (16%), Positives = 100/338 (29%), Gaps = 19/338 (5%)
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
HA G + G N Y + ++ + S + D + + +
Sbjct: 4407 HAAGDVLIGIENVIGSSYDDTLIGDGNANVLSGLGGADSIDGGGGIDTADYSASGAAVTM 4466
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
++ + G+++ I S F TI S G + L G N
Sbjct: 4467 DLRYGTYKGGDAEGDSLTGI-ENVIGSNFNDTITGSNGSNYL----YGMDGNDALAAAYG 4521
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G N T+ ++G G+D + G N+ +G D+ DG +G+D +
Sbjct: 4522 ADTLDGGAGNDTLRGARDKNLLLGGDGDDRLYGQGNNDTLAGGAGADLLDGGTGVDAADF 4581
Query: 310 YAPSY--LYKIYRFENAIIVYDANEHKQDFLSDVERLRFA------------DQCIDSVN 355
A S + D N D L +E++
Sbjct: 4582 SASSAWVNIDMNLATAQTGGGDGNHALGDTLVSIEQIIGTNDTTHGDVLIGDGGDNLISG 4641
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
L+ + L+ G D+ G + + GS DL +
Sbjct: 4642 GAGDDTLDGGLGNDLLLGGEGDDLLIGGVTDTAHGGDGFDTFRLEDNIGTGSIFDLSVMN 4701
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
+ R G + N A KA + + +
Sbjct: 4702 DAGRITGIERIDISGDADDANALALKASDVLDTTGGAD 4739
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 45/151 (29%), Gaps = 8/151 (5%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ ++ G + +A + + ++G G+D++ G+ NN D G G D
Sbjct: 2864 GSNGSDTLIGNHQANAMAGNDGNDLMIGGDGDDILYGHGGNNTLEGGLAADALLGDLGED 2923
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN--------VK 357
Y + + E D L ++ L ++
Sbjct: 2924 IASYEHAASGVNVSLEIQGRRQVGTGEENGDELYHMDGLYGSNHNDTLTGCNTQYSDSGS 2983
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ ++ + L + G D +
Sbjct: 2984 VHNRIQGRGGDDILAGLAGADTLDGGDGNDT 3014
Score = 40.9 bits (94), Expect = 0.66, Method: Composition-based stats.
Identities = 41/321 (12%), Positives = 89/321 (27%), Gaps = 27/321 (8%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ ++ G ++ + + ++G GND + G + N+ G D+ G D
Sbjct: 4207 GSYGHDTLIGNDQGNDMNGLDGNDLMIGGVGNDSLWGVNNNDTLEGGLGEDLIWGGMDYD 4266
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI--LE 363
Y + K+ + + ++ + + + + R I L
Sbjct: 4267 IASYANAASGVKVDLRIQNVKGWVQQGAGEEDGDEFYYMDGLYGSAYNDTLTGRDIDQLG 4326
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ +++ L G D+ + +G D S DL G +
Sbjct: 4327 FMSAHNRLEGREGDDILAGLAGADILDGGDGIDTADYSLSEANVRVDLSQATAQTGGGSV 4386
Query: 424 RH------------YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
I G + +S++D + +A L +G
Sbjct: 4387 MTETILDRNGDEWKIIYTGNHAAGDVLIGIENVIGSSYDDTLIGDGNANVLSGLGGADSI 4446
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
+ G D+ Y S + G EG + + +
Sbjct: 4447 DGGG------GIDTADYSASGAAVTMDLRYGTYKG-------GDAEGDSLTGIENVIGSN 4493
Query: 532 SHEDLINAFADAPDLVQAGKD 552
++ + + G D
Sbjct: 4494 FNDTITGSNGSNYLYGMDGND 4514
>gi|540077|gb|AAA21546.1| HlyA [Nostoc sp. PCC 7120]
Length = 322
Score = 70.6 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 21/188 (11%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
LD L GG + ++ G N +I ++ + G +D + GN+ N++
Sbjct: 21 TLDNILSGGDNDDTLRGNAGNDTLFGGSGNDSITGNSADNILSGGDNDDTLRGNAGNDIL 80
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+GND DG G D + + + + + + D + L D
Sbjct: 81 NGGAGNDSLDGGLGDD--VMTGGASNDTYFVDSSNDTIIEEADGGTDTVRASITLTLGDH 138
Query: 350 C-------------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ +IL A + +I G D
Sbjct: 139 LENLILIGNSPIDGTGNALRNNITGNVANNILSGGADNDTIISGDGDDTLYGDSGNDTLT 198
Query: 391 LSEGRDIT 398
G DI
Sbjct: 199 GGNGNDIL 206
Score = 44.4 bits (103), Expect = 0.064, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 78/259 (30%), Gaps = 17/259 (6%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + + D D R G T+ + I G+ G ++D
Sbjct: 18 SFATLDNILSGGDNDDTLRGNAGNDTLFGGSGNDSIT--------GNSADNILSGGDNDD 69
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ +++ DS+ T S+ N+ E
Sbjct: 70 TLRGNAGNDILNGGAGNDSLDGGLGDDVMTGGASND--------TYFVDSSNDTIIEEAD 121
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+I + G D L+ ++ G ++I G N ++ ++++
Sbjct: 122 GGTDTVRASITLTLG-DHLENLILIGNSPIDGTGNALRNNITGNVANNILSGGADNDTII 180
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+D + G+S N+ +GND+ G G D + I +
Sbjct: 181 SGDGDDTLYGDSGNDTLTGGNGNDILVGGMGSDRLTGGNGKDTFAFSAPITDGIDTITDF 240
Query: 333 HKQDFLSDVERLRFADQCI 351
+ D L V+ F +
Sbjct: 241 NPLDDLLRVDAAGFGGGLV 259
Score = 40.5 bits (93), Expect = 0.87, Method: Composition-based stats.
Identities = 34/319 (10%), Positives = 63/319 (19%), Gaps = 26/319 (8%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+ FA L A + L G D + D +
Sbjct: 16 LVSFATLDNILSGGDNDDTLRGNAGNDTLFGGSGNDSITGNSADNILSGGDNDDTLRGNA 75
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
+D+ N + N F E+
Sbjct: 76 -----GNDILNGGAGNDSLDGGLGDDVMTGGASNDTYFVDSSNDTIIEEADGGTDTVRAS 130
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSY--DDLRNVFGSDRGAAARHYITHGVKEGRN 520
+ + G + L + ++ N S G
Sbjct: 131 ITLTLGDHLENLILIGNSPIDGTGNALRNNITGNVANNILSGGADNDTIISGDGDDTLYG 190
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLW 580
L ++ L+ GKD TF +T D
Sbjct: 191 DSGNDTLTGGNGNDILVGGMGSDRLTGGNGKD-------------TFAFSAPITDGIDTI 237
Query: 581 NVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLY 640
F G G+ + + ++ L+
Sbjct: 238 TDFNPLDDLLRVD------AAGFGGGLVAGTLLRSQFVLGTAAKTTSDRFIYNQSTGALF 291
Query: 641 TDYFGDGNYYDSDLYSMHD 659
D G G+ + ++ +
Sbjct: 292 FDVDGTGSSSQVQIATLSN 310
>gi|83950901|ref|ZP_00959634.1| Nidogen, extracellular region [Roseovarius nubinhibens ISM]
gi|83838800|gb|EAP78096.1| Nidogen, extracellular region [Roseovarius nubinhibens ISM]
Length = 463
Score = 70.6 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 18/148 (12%), Positives = 41/148 (27%), Gaps = 3/148 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + + + G G D++ G+ ++ F G D +G G D +
Sbjct: 224 VLEGGATGDVLTGGAGNDLLRGRDGPDILRGHDGHDWLFGGDGGDTLNGGDGNDVIYGGT 283
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ D + +D + + + + ++ +A
Sbjct: 284 TDADISDVIYGGNGHDRIYGGAGNDIVYGGNDNDSIEGGAGADELLGQLGDDVITGSAWS 343
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + G D G D
Sbjct: 344 DLIYGGEGNDFINGGFGSDRVNGGTGAD 371
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 43/147 (29%), Gaps = 6/147 (4%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G +GND++ G ++ G+D G G DT + +
Sbjct: 225 LEGGATGDVLTGGAGNDLLRGRDGPDILRGHDGHDWLFGGDGGDTLNGGDGNDVIYGGTT 284
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ I + D R+ +E A ++L+ +G DV
Sbjct: 285 DADISDVIYGGNGHD------RIYGGAGNDIVYGGNDNDSIEGGAGADELLGQLGDDVIT 338
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSY 408
EG D +
Sbjct: 339 GSAWSDLIYGGEGNDFINGGFGSDRVN 365
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 2/120 (1%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T+ G+D++ + + I G N +
Sbjct: 257 GHDWLFGGDGGDTLNGGDGNDVIYGGTTDADISDVIYGGNGHDRIYGGAGNDIVYGGNDN 316
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S+ G +G D ++G ++V S+ +D+ G G D F ++ A Y
Sbjct: 317 DSIEGGAGADELLGQLGDDVITGSAWSDLIYGGEGND--FINGGFGSDRVNGGTGADRFY 374
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/158 (12%), Positives = 41/158 (25%), Gaps = 14/158 (8%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN- 295
GG + + G + + H + + G G D + G N+V + + +
Sbjct: 227 GGATGDVLTGGAGNDLLRGRDGPDILRGHDGHDWLFGGDGGDTLNGGDGNDVIYGGTTDA 286
Query: 296 ---DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
DV G +G D + + +Y + + L
Sbjct: 287 DISDVIYGGNGHDRIY--GGAGNDIVYGGNDNDSIEGGAGAD--------ELLGQLGDDV 336
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
++ + + G D F
Sbjct: 337 ITGSAWSDLIYGGEGNDFINGGFGSDRVNGGTGADRFY 374
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 45/150 (30%), Gaps = 11/150 (7%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
V+ G + +V +GND+ G G D ++ + + + + +
Sbjct: 223 AVLEGGATGDVLTGGAGNDLLRGRDGPDILR--GHDGHDWLFGGDGGDTLNGGDGNDVIY 280
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ AD + A + + D E E G D+
Sbjct: 281 GGTTD----ADISDVIYGGNGHDRIYGGAGNDIVYGGNDNDSIEGGAGADELLGQLGDDV 336
Query: 398 TF----DSYLYLGSYDDLRN-VFGSDRGAA 422
+Y G +D N FGSDR
Sbjct: 337 ITGSAWSDLIYGGEGNDFINGGFGSDRVNG 366
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 15/124 (12%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + G+ I D+ IY G D + + G
Sbjct: 266 GGDTLNGGDGNDVIYGGTTDADISDVIYGGNGHDRIY-------------GGAGNDIVYG 312
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N +I + ++G G+DV+ G++ +++ + GND +G G D +
Sbjct: 313 GNDNDSIEGGAGADELLGQLGDDVITGSAWSDLIYGGEGNDFINGGFGSDRV--NGGTGA 370
Query: 316 YKIY 319
+ Y
Sbjct: 371 DRFY 374
Score = 46.7 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 7/117 (5%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK---NMTIAQHTVIESVVGSSGNDVVIGN 283
G D D G + ++ + GG + I + + G +GND+V G
Sbjct: 254 GHDGHDWLFGGDGGDTLNGGDGNDVIYGGTTDADISDVIYGGNGHDRIYGGAGNDIVYGG 313
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ N+ +G D G G D ++ IY E + D ++
Sbjct: 314 NDNDSIEGGAGADELLGQLGDD--VITGSAWSDLIYGGEGNDFI--NGGFGSDRVNG 366
>gi|6981214|ref|NP_036996.1| matrilysin precursor [Rattus norvegicus]
gi|1705982|sp|P50280|MMP7_RAT RecName: Full=Matrilysin; AltName: Full=Matrin; AltName:
Full=Matrix metalloproteinase-7; Short=MMP-7; AltName:
Full=Pump-1 protease; AltName: Full=Uterine
metalloproteinase; Flags: Precursor
gi|402493|gb|AAA99432.1| matrilysin [Rattus norvegicus]
gi|40555747|gb|AAH64657.1| Matrix metallopeptidase 7 [Rattus norvegicus]
gi|149020720|gb|EDL78525.1| matrix metallopeptidase 7 [Rattus norvegicus]
Length = 267
Score = 70.6 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/193 (22%), Positives = 64/193 (33%), Gaps = 50/193 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKF 81
W + + Y+ TT F + ++ + AL WS + L F+ S +DI
Sbjct: 107 WHSRTVTYRIVSYTTDLPRFLVD-------QIVKRALRMWSMQIPLNFKRVSWGTADIII 159
Query: 82 IS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ G+ P + +FDK + W G G A H
Sbjct: 160 GFARGDHGDNFPFDGPGNTLGHAFAP--GPGLGGDAHFDKDEYWTDGEDSGVNFLFVATH 217
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H S +SVM D D S
Sbjct: 218 ELGHSLGLGHS-------------------SVPSSVMYPTYQGDHSEDFSLTK------D 252
Query: 187 DIVAVQKIYGAPK 199
DI +QK+YG
Sbjct: 253 DIAGIQKLYGKRN 265
>gi|116071371|ref|ZP_01468640.1| Peptidase, metallopeptidase [Synechococcus sp. BL107]
gi|116066776|gb|EAU72533.1| Peptidase, metallopeptidase [Synechococcus sp. BL107]
Length = 379
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 57/299 (19%), Positives = 103/299 (34%), Gaps = 35/299 (11%)
Query: 39 RLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFIS-SNNGYVCTPRYDSR 97
D + L P + A+ + + ++DL F ET ++ N R
Sbjct: 31 YYISDSSTLIPGYIDWAQNYIKQVDAIIDLDFIETGNINNSTISFHVRNHIPSDENILGR 90
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
++ + +AD + + +HE GHALGL PG D ++ D
Sbjct: 91 CSLKGTWIEADTYLSNRATTNSNYNTFIHEFGHALGLGEPG----------YDTRWDQDD 140
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS-LGNNIYKIEVQQKDS 216
+ MSY D + + T +D A+ I+G+ + G++ + Q+
Sbjct: 141 ---TSMSYNS-----SDITGDFNITYTSNDWDALLSIWGSEDHAKSGDSAANLLFGQRGD 192
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
++IY G DL+ S+ G + TI + + G +
Sbjct: 193 TPSESIYGLDGSDLI-------------FGFGGKDSLIGGNGSDTIYGGYGGDILDGGNQ 239
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+D + G+ ++ +G+D G DT F S I + Q
Sbjct: 240 DDEIYGSHGSDYILGRAGSDNVFAGQGADTIF--GGSGADFIRGGGGPNNIDAGENDGQ 296
Score = 39.8 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 19/176 (10%), Positives = 54/176 (30%), Gaps = 17/176 (9%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG--YEKNMTIAQHTVIESVV 272
P T +D + + I + W ++ ++ + + +
Sbjct: 128 GEPGYDTRWDQDDTSMSYNSSDITGDFNITYTSNDWDALLSIWGSEDHAKSGDSAANLLF 187
Query: 273 GSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
G G+ + + G +++ F G D G +G DT + I+
Sbjct: 188 GQRGDTPSESIYGLDGSDLIFGFGGKDSLIGGNGSDTIY-----------GGYGGDILDG 236
Query: 330 ANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
N+ + + S + + + + + + + + G + ++ +
Sbjct: 237 GNQDDEIYGSHGSDYILGRAGSDNVFAGQGADTIFGGSGADFIRGGGGPNNIDAGE 292
>gi|1710794|sp|P55129|RTX12_ACTPL RecName: Full=RTX-I toxin determinant A from serotypes 5/10;
AltName: Full=APX-IA; AltName: Full=Cytolysin IA;
Short=CLY-IA; AltName: Full=Hemolysin IA; Short=HLY-IA
gi|497787|dbj|BAA04014.1| RTX toxin I type L [Actinobacillus pleuropneumoniae]
Length = 1023
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 4/139 (2%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++GS+ D G+ ++F + G+D G+ G D + I+ + +
Sbjct: 717 VEEIIGSNRKDKFFGSRFTDIFHGAKGDDEIYGNDGHDILY--GDDGNDVIHGGDGNDHL 774
Query: 328 YDANEHKQ-DFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKH 385
N + + L D + + ++L A + L G ++F+
Sbjct: 775 VGGNGNDRLIGGKGNNFLNGGDGDDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVG 834
Query: 386 FYEFGLSEGRDITFDSYLY 404
+ G+DI S Y
Sbjct: 835 NDKIYGGLGKDIYRYSKEY 853
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 16/131 (12%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDD + G + I + I G + N + + ++G
Sbjct: 731 GSRFTDIFHGAKGDDEI----YGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGG 786
Query: 275 SGNDVVIGNSAN----------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
GN+ + G + NV +GND+ GS G T + KIY
Sbjct: 787 KGNNFLNGGDGDDELQVFEGQYNVLLGGAGNDILYGSDG--TNLFDGGVGNDKIYGGLGK 844
Query: 325 IIVYDANEHKQ 335
I + E+ +
Sbjct: 845 DIYRYSKEYGR 855
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 38/154 (24%), Gaps = 36/154 (23%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + + + + + G GND ++G + N+ GN
Sbjct: 730 FGSRFTDIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGN 789
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D E F Q +
Sbjct: 790 NFLNGGDGDD------------------------------------ELQVFEGQYNVLLG 813
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
IL + +G D +
Sbjct: 814 GAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIY 847
Score = 44.8 bits (104), Expect = 0.046, Method: Composition-based stats.
Identities = 28/246 (11%), Positives = 59/246 (23%), Gaps = 54/246 (21%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----AIIVYD------------ 329
N+ + SSG+ + +G D +Y Y + ++ +
Sbjct: 616 NDRIYLSSGSSIVYAGNGHDVAYYDKTDTGYLTFDGQSAQKAGEYIVTKELKADVKVLKE 675
Query: 330 ------------------------------ANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+D L VE + +++ +
Sbjct: 676 VVKTQDISVGKTCSEKLEYRDYELSPFELGNGIRAKDELHSVEEIIGSNRKDKFFGSRFT 735
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD----ITFDSYLYLGSYDDLRNVF 415
I +++ G D+ +G D + L G ++ N
Sbjct: 736 DIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGG 795
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
D G A + Y + +L + + +
Sbjct: 796 DGDDELQVFE----GQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSK 851
Query: 476 EEGRFV 481
E GR +
Sbjct: 852 EYGRHI 857
>gi|149912590|ref|ZP_01901124.1| heme peroxidase [Roseobacter sp. AzwK-3b]
gi|149812996|gb|EDM72822.1| heme peroxidase [Roseobacter sp. AzwK-3b]
Length = 1277
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 70/223 (31%), Gaps = 7/223 (3%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGG---DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
N + +++ D G D L G + + + + G E
Sbjct: 1004 DNTSMSPDTDTSAEGIVESDTDMGAPLVGAAGDDILSGMAGDDMLVGNAGDDMLFGGEGR 1063
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + G +G+D ++G +++ +G+D+ G++G DTF IY
Sbjct: 1064 DDMLGGDGADMLSGGAGSDHILGGDGDDMIIGGTGSDILMGNAGDDTFLGTNGDCNDLIY 1123
Query: 320 RFENAIIVYDANEHKQDFL----SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
E + A+ + + +R + + A + +
Sbjct: 1124 GGEGTDTIDMASVTSDLTVRLGNTGTDRGSVTTEEGGRDTIWSIENFVGGAGDDTIFASD 1183
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+V + F D L + D L+ G+D
Sbjct: 1184 AANVLDGGDGNDTFVFETAASAQGDHINGLNAGDVLQFGTGAD 1226
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 45/141 (31%), Gaps = 18/141 (12%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW--SSIGGYE 257
G+ G++ + + IY G D +D+ + NT + S
Sbjct: 1104 GNAGDDTFLG----TNGDCNDLIYGGEGTDTIDMASVTSDLTVRLGNTGTDRGSVTTEEG 1159
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
TI IE+ VG +G+D + + A NV DG G DTF + +
Sbjct: 1160 GRDTIW---SIENFVGGAGDDTIFASDAANVL---------DGGDGNDTFVFETAASAQG 1207
Query: 318 IYRFENAIIVYDANEHKQDFL 338
+ D
Sbjct: 1208 DHINGLNAGDVLQFGTGADMF 1228
>gi|253998404|ref|YP_003050467.1| Hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
gi|253985083|gb|ACT49940.1| Hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
Length = 863
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 79/302 (26%), Gaps = 6/302 (1%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
D++ G L ++ + +D D G I
Sbjct: 84 GDVLVENAKQGTDTIVLAADLGITTFSLSGAFKNYENFDISMIDTTSFNFEGNSSANILT 143
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + I G + N T++ + + +VG GND ++G + + GND G G D
Sbjct: 144 GNDGKNEIYGLDGNDTLSGNAGDDYLVGGKGNDSLMGGADADTLDGGVGNDSLSGGDGDD 203
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE---RLRFADQCIDSVNVKQRSIL 362
+ + Y + D ++E + I ++ + L
Sbjct: 204 LYIIDSI---YDVVVDTGGDDDEVHASISFDLSKNLELEHLVLTGAASISAIGNDSNNYL 260
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ G D +G D Y D + +
Sbjct: 261 AGNTGNNLMDGGAGADYLVGDAGNDTLKGGDGADTLIGGVGNDIYYADANDNLLENASQG 320
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
I + D + + DL A A ++ ++
Sbjct: 321 IDTIILTSADGLSSFDLSYGIFANFENFDLSKTGAVAFEVDGNTANNILTGNDGANALSG 380
Query: 483 FD 484
D
Sbjct: 381 QD 382
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 55/381 (14%), Positives = 111/381 (29%), Gaps = 29/381 (7%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKAD-------VWRYGIGKGTILS 121
+F E + + S + N + TI
Sbjct: 434 SFVEKAGEGNDTLTLSGGAGANKLTTLTLAATLENLNATLVDSSVLLNLTGNAANNTIAG 493
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A ++I G G V G ++ + + ++ +
Sbjct: 494 SGAGNKILGLGGDDILIGDELGDIVAGGNDTLDGGAGNDALYGGAGDDSLVGGTGQDTLV 553
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+D Y + G +I +E + S G D + L +
Sbjct: 554 GGEGND------RYVVNLLTSGTSIGSLEDNVTEDT-------SAGTDTVYLIGNVKLSA 600
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
Y + + + + +++ + +++GS ++ + GN+A N+ GND DG+
Sbjct: 601 YQMFDLTTDTFLNIEHLDIS-GTGSSKFNILGSDESNSLKGNAAANLLDGGIGNDTLDGA 659
Query: 302 SGLDTFFYYAPSYLY--------KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
+G DT A +Y + + +N +VE L + +
Sbjct: 660 AGADTLVGGAGDDIYYVDNKLDMVTESADGGTDMVYSNLATYILADNVENLSIDTKGVSG 719
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+++ A L+ G D + EG DI G+ D + +
Sbjct: 720 TGNSLDNLIVGNAKANTLVGGDGNDTLNGGLGSDKLTGGEGEDIFVFDTALKGNIDTITD 779
Query: 414 VFGSDRGAAARHYITHGVKEG 434
+ I G+ G
Sbjct: 780 FHVGEDAFNLDDAIFGGLSNG 800
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 44/324 (13%), Positives = 87/324 (26%), Gaps = 29/324 (8%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+D G + + + + ++I N T+A + + + G GND++ G + ++
Sbjct: 11 VDNRSNGLKGDINYVGSAANNTILAGSGNDTLAGNAGDDYLDGGIGNDLLDGGTGSDTLI 70
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+GND + D A I + I + + +
Sbjct: 71 GGAGNDTYVVDDSGDVLVENAKQGTDTIVLAADLGITTFSLSGAFKNYENFDISMIDTTS 130
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ +IL ++ + G D +G DS + D
Sbjct: 131 FNFEGNSSANILTGNDGKNEIYGLDGNDTLSGNAGDDYLVGGKGN----DSLMGGADADT 186
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L G+D + G + + +D ++A + +H
Sbjct: 187 LDGGVGNDSLS-----GGDGDDLYIIDSIYDVVVDTGGDDDEVHASISFDLSKNLELEHL 241
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
G + DS YL G L
Sbjct: 242 VLTGAASISAIGNDSNNYLAGN--------------------TGNNLMDGGAGADYLVGD 281
Query: 531 ASHEDLINAFADAPDLVQAGKDHF 554
A ++ L + G D +
Sbjct: 282 AGNDTLKGGDGADTLIGGVGNDIY 305
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 77/619 (12%), Positives = 146/619 (23%), Gaps = 72/619 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ N ++ + AD G T+ + + G+
Sbjct: 244 TGAASISAIGNDSNNYLAGNTGNNLMDGGAGADYLVGDAGNDTLKGGDGADTLIG--GVG 301
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ Y + D+ + + S D S+G A D+ +
Sbjct: 302 NDIYYADANDNLLENASQGIDTIILT----SADGLSSFDLSYGIFANFENFDLSKTGAVA 357
Query: 196 GAPKGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G+ NNI ++ G+D L L +
Sbjct: 358 FEVDGNTANNILTGNDGANALSGQDGNDSLMGGRGNDTLTGGAGSDT-----LVGGANDD 412
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT-----F 307
+ + T I + S + + +G + + T
Sbjct: 413 NYVVNLKLA-GKGTSITVALEDSFVEKAGEGNDTLTLSGGAGANKLTTLTLAATLENLNA 471
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
S L + + + + + + D+ + + L+ A
Sbjct: 472 TLVDSSVLLNLTGNAANNTIAGSGAGNKILGLGGDDILIGDE-LGDIVAGGNDTLDGGAG 530
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRD-------ITFDSYLYLGSYDDLRNVFGSDRG 420
+ L G D EG D + S L G+D
Sbjct: 531 NDALYGGAGDDSLVGGTGQDTLVGGEGNDRYVVNLLTSGTSIGSLEDNVTEDTSAGTDTV 590
Query: 421 AAARHYITHGVK------------EGRNPDAFKALEYIASHED----LINAFADAPDLVQ 464
+ + E + + ++ D L A
Sbjct: 591 YLIGNVKLSAYQMFDLTTDTFLNIEHLDISGTGSSKFNILGSDESNSLKGNAAANLLDGG 650
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG-----AAARHYITHGVKE-- 517
+G D + +Y +D G + YI E
Sbjct: 651 IGNDTLDGAAGADTLVGGAGDDIYYVDNKLDMVTESADGGTDMVYSNLATYILADNVENL 710
Query: 518 -----GRNPDAFKALEYIASH---EDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
G + I + L+ + G D G E F+
Sbjct: 711 SIDTKGVSGTGNSLDNLIVGNAKANTLVGGDGNDTLNGGLGSD--KLTGGEGEDIFVFDT 768
Query: 570 DLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLS 629
L D F A G +G++F + + K +D +
Sbjct: 769 A--LKGNIDTITDFHVGEDAFNLDDAIFG------GLSNGIEFYAG---TLKGSAGSDAN 817
Query: 630 LSFDHKKVDLYTDYFGDGN 648
+ +D+ LY D G G+
Sbjct: 818 IIYDNTNGKLYYDADGSGS 836
>gi|157130905|ref|XP_001662056.1| matrix metalloproteinase [Aedes aegypti]
gi|108881898|gb|EAT46123.1| matrix metalloproteinase [Aedes aegypti]
Length = 377
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 44/259 (16%), Positives = 73/259 (28%), Gaps = 70/259 (27%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIK 80
Q WS + Y + + R A WS+V +L F E + +++
Sbjct: 2 QKWSKSLLTYAIVNYPRGMPEGTV-------RSTIRTAFDAWSRVTNLDFVERASSAEVD 54
Query: 81 FIS-------------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+ + P +I+F+ + + L
Sbjct: 55 IQVAFEGMNHYRRGVPCQYNHENTLAHAFFPE-----LGDIHFNTLHFFNGETSREEFL- 108
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
+ A+HEIGH+LGL+H S + S
Sbjct: 109 NTAVHEIGHSLGLLH---------------SASRSSIMY-----------GAQLSSNLLV 142
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD-------DLLDLT 234
P DI A+Q IYG G + + T + + D + L
Sbjct: 143 EPQPEDIEAIQAIYGVRSGPPSTTQLPLTTTRPRPAPPTTKPRTKTNLCALSSFDTIVLD 202
Query: 235 LIGG-----VKNYIDLNTE 248
G + Y +LN
Sbjct: 203 HRGNICVLAGQYYYNLNET 221
>gi|260576773|ref|ZP_05844758.1| Na-Ca exchanger/integrin-beta4 [Rhodobacter sp. SW2]
gi|259021025|gb|EEW24336.1| Na-Ca exchanger/integrin-beta4 [Rhodobacter sp. SW2]
Length = 1099
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 78/580 (13%), Positives = 149/580 (25%), Gaps = 45/580 (7%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
+ + D G + G H + G
Sbjct: 525 STDTVLGSGAGAVENLVGTAAGDRLEGSSGNNALTGGGGADTFVITSGGGHDRITDLGLG 584
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS-DIVAVQKIYGAPKGSLGN 204
V N + S+ + + + + T ++ ++ A+ G + G
Sbjct: 585 GADVVTVGSNATLTASLAAAWTATAASSNFGVANINTSGLAVNLAAITLGSGWRVTNSGF 644
Query: 205 NIY--------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG----VKNYIDLNTESWSS 252
+ + + S + T+ GDD+ +D S S
Sbjct: 645 ATHLTGSAAGDTLSASTRASLGVDTLTGGLGDDIYVTNGDDQLVELAGQGLDRVASSGSY 704
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G++ ++V+ GN N +G D G G DT+
Sbjct: 705 TLAANVEYLTLTGRSDINGTGNALDNVINGNIGVNTLNGGTGTDTLAGGLGNDTYI---T 761
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDL 371
+ A I + +++E L I+ +I+ A+ L
Sbjct: 762 DGGDILNEGVGAGIDRVLSSATYALAANIENLVLTGTAAINGSGNALDNIITGNAASNIL 821
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D + +++G DI G DR A++ YI
Sbjct: 822 SGTGGADTLVGGLG-DDIYVTDGSDIL-----------VEAVGAGLDRVASSVTYILAAN 869
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
E A+ G + + G + +Y+
Sbjct: 870 LEYLTLTGTAAIN-------ATGNALSNILNGNAGANTLNGAGGNDTMAGGQGDDIYVVD 922
Query: 492 YDDLR---NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
D G DR A++ Y E A+ + D I +++
Sbjct: 923 GGDSIVEAAGAGLDRVASSNTYTLAANLEYLTLTGTAAINGSGNALDNIVNGNAGANILG 982
Query: 549 AGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
+ + G FN + + D + + D A L
Sbjct: 983 GDIGNDTLSGGAGADIFIFNTAPGVGNIDRITDFAVIDDMMAVG------GPGFAGLAAG 1036
Query: 609 GMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
G+ + A + ++ L D G+G
Sbjct: 1037 GLAASAFAANLTGLATDALQRILYETDTGRLMFDADGNGA 1076
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/410 (11%), Positives = 94/410 (22%), Gaps = 28/410 (6%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA---L 125
TF +S + + + G V F G + +
Sbjct: 105 TFMASSAGARYDLMFNRPGMVFNGDAGDNLLGGGVFADVFNGMGGTDTVSYIRAALSVVA 164
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV----MSYFMPQDSMMDASFGYCA 181
G G+ +D+ L + Y + + ++ G
Sbjct: 165 DLEGTVAGVGEGAGDVFNGIANLTGSDHAGGDQLFGTAGVNVIYGLWGNDLLSGRGGNDT 224
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+ G+ + G+ + + G + ++ G
Sbjct: 225 LEGGGGDDTLIGGTGSDLLNGGDGDGDELNYSDMAANLSLYLSYNGGGTVLVSGTGDFDT 284
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ + N + + + G SGND + G+ N+ F GND G
Sbjct: 285 F-----TGMEYLQSGSGNDNLTGNQYANRLTGGSGNDTLFGSEGNDTLFGGLGNDYLIGG 339
Query: 302 SGLDTF----------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
SG D F + + + ++ +
Sbjct: 340 SGTDIVHGGGGIDILAFNNGEIGAVNLVIDDTGTGFATTQGTGSCTFDGITQIVGSFGND 399
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE------GRDITFDSYLYL 405
+ + + L+ G D + G + D L
Sbjct: 400 TISGNILGTAIWGDNGNDRLLGRGGNDGLDGGAGNDSLWGDNDWGLQGGNEDMGDDSLNG 459
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
DD + I G D +I ++ L
Sbjct: 460 NDGDDRMFGGQGNDHMDGGAGIDTADYSGMFDDYGNGEYFIVANLGLDRV 509
Score = 42.5 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 68/527 (12%), Positives = 132/527 (25%), Gaps = 46/527 (8%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S +D F N Y+ D IG + + G
Sbjct: 321 SEGNDTLFGGLGNDYLIGGSGTDIVHGGGGIDILAFNNGEIGAVN----LVIDDTGTGFA 376
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ + + ND+ +++ + D+ D G +
Sbjct: 377 TTQGTGSCTFDGITQIVGSFGNDTISGNILGTAIWGDNGNDRLLGRGGNDGLDGGAGNDS 436
Query: 194 IYGAP-------KGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTL---IGGVK 240
++G +G++ + G D D + G
Sbjct: 437 LWGDNDWGLQGGNEDMGDDSLNGNDGDDRMFGGQGNDHMDGGAGIDTADYSGMFDDYGNG 496
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIES----VVGSSGNDVVIGNSANNVFFESSGND 296
Y + + Y + +I + G+ + ++G +A + SSGN+
Sbjct: 497 EYFIVANLGLDRVDKYYFDYFDGLSYLISTDTVLGSGAGAVENLVGTAAGDRLEGSSGNN 556
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G G DTF + +I + + A + V
Sbjct: 557 ALTGGGGADTFVITSGGGHDRITDLGLGGADVVTVGSNATLTASLAAAWTATAASSNFGV 616
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS-------YD 409
+ + + G V S + G + G ++ + LG D
Sbjct: 617 ANINTSGLAVNLAAITLGSGWRVTNSGFATHLTGSAAGDTLSASTRASLGVDTLTGGLGD 676
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI----NAFADAPDLVQV 465
D+ G D+ V + +EY+ D +
Sbjct: 677 DIYVTNGDDQLVELAGQGLDRVASSGSYTLAANVEYLTLTGRSDINGTGNALDNVINGNI 736
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF---GSDRGAAARHYITHGVKEGRNPD 522
G + + + + Y+ D+ N G DR ++ Y E
Sbjct: 737 GVNTLNGGTGTDTLAGGLGNDTYITDGGDILNEGVGAGIDRVLSSATYALAANIENLVLT 796
Query: 523 AFKALE-----------YIASHEDLINAFADAPDLVQAGKDHFSNFG 558
A+ A+ L + G D + G
Sbjct: 797 GTAAINGSGNALDNIITGNAASNILSGTGGADTLVGGLGDDIYVTDG 843
Score = 39.8 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 69/243 (28%), Gaps = 16/243 (6%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSS 302
S+GG ++ I T + S G+ + ++ N VF +G++ VF+G
Sbjct: 91 SVGGAFDHLNIDVGTFMASSAGARYD--LMFNRPGMVFNGDAGDNLLGGGVFADVFNGMG 148
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD--QCIDSVNVKQRS 360
G DT Y + + V E D + + L +D +
Sbjct: 149 GTDTVSYIRAALSVV---ADLEGTVAGVGEGAGDVFNGIANLTGSDHAGGDQLFGTAGVN 205
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
++ + L G D E G D+ +
Sbjct: 206 VIYGLWGNDLLSGRGGNDTLEGGGGDDTLIGGTGSDLLNGGDGDGDELNYSDMAANLSLY 265
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ T V + D F +EY+ S N + G EG
Sbjct: 266 LSYNGGGTVLVSGTGDFDTFTGMEYLQSGSGNDNLTGNQYANRLTGGSGNDTLFGSEGND 325
Query: 481 VTF 483
F
Sbjct: 326 TLF 328
>gi|194337580|ref|YP_002019374.1| Hemolysin-type calcium-binding region [Pelodictyon
phaeoclathratiforme BU-1]
gi|194310057|gb|ACF44757.1| Hemolysin-type calcium-binding region [Pelodictyon
phaeoclathratiforme BU-1]
Length = 1971
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 69/218 (31%), Gaps = 5/218 (2%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++A TV SV+G D + G + N+ G DV DG G+DT Y +
Sbjct: 1651 SVATETVARSVIG--AADTINGGTGNDNISGLIGADVLDGGEGIDTVNYSLSLAAVTVNL 1708
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
N V + + D +S+ E + ++ + L+ A ++ + +G D+
Sbjct: 1709 ATN---VVSGGDAQGDTISNFENVTGSNYHDVLTGSDAANTLDGGAGHDTIYGGLGADLI 1765
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ + G D + + +++ SD + + G G + +
Sbjct: 1766 LAGEGQDVVDGGAGIDTINLTESGVAPSVQVKDTVSSDVISLVNADLITGFASGTDKFDY 1825
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ + G
Sbjct: 1826 NGALLNGLGTNADGIAGTDVITAATFAAGLGDPLSTAG 1863
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 480 FVTFDSYLYLGSYDDLRNVF-------GSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
+ +S+ Y SY DLR +D AA HY H E R+ F A EY+AS
Sbjct: 10 TGSLESWEYFASYGDLRGWALLDGVLNAADSTNAAWHYNMHASAENRSI-VFDAWEYLAS 68
Query: 533 HEDLINAFADAPDLVQAGKD---HFSNFGYEEGRSI-TFNPDLYLTSYDDLWN-VFGSDR 587
+ DL+N H+ G EGRS+ TF+ YL + DL + + ++
Sbjct: 69 NIDLMNWLGADGITDADAIKAAQHYITNGAAEGRSMGTFDSAAYLAANADLRDWLGATNY 128
Query: 588 SAAAQHYITHGMKEGRALGI 607
AAA+HYI G E A
Sbjct: 129 DAAAKHYIQFGRAEIAAGTP 148
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 12/136 (8%)
Query: 436 NPDAFKALEYIASHEDLINAFADAP----DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+ ++ EY AS+ DL H++ E R + FD++ YL S
Sbjct: 9 TTGSLESWEYFASYGDLRGWALLDGVLNAADSTNAAWHYNMHASAENRSIVFDAWEYLAS 68
Query: 492 YDDLRNVFGSDRGA------AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
DL N G+D AA+HYIT+G EGR+ F + Y+A++ DL +
Sbjct: 69 NIDLMNWLGADGITDADAIKAAQHYITNGAAEGRSMGTFDSAAYLAANADLRDWLGA--T 126
Query: 546 LVQAGKDHFSNFGYEE 561
A H+ FG E
Sbjct: 127 NYDAAAKHYIQFGRAE 142
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/213 (23%), Positives = 73/213 (34%), Gaps = 17/213 (7%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVI-------GQDVFESMKHFYEFGLSEGRDITFDSYLY 404
S+ EY ASY DL D + H+ +E R I FD++ Y
Sbjct: 6 PSITTGSLESWEYFASYGDLRGWALLDGVLNAADSTNAAWHYNMHASAENRSIVFDAWEY 65
Query: 405 LGSYDDLRNVFGSDR------GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
L S DL N G+D AA+HYIT+G EGR+ F + Y+A++ DL +
Sbjct: 66 LASNIDLMNWLGADGITDADAIKAAQHYITNGAAEGRSMGTFDSAAYLAANADLRDWLG- 124
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS--YDDLRNVFGSDRGAAARHYITHGVK 516
H+ FG E T L L + + + + + G
Sbjct: 125 -ATNYDAAAKHYIQFGRAEIAAGTPGRLLRLDNSFTLTTDDDTATANVFNSAPKLVPGTG 183
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
L I ++ L D
Sbjct: 184 YLTTLSDNDVLTGIGTNPTLNVEIGTQTDFTSE 216
Score = 50.6 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQA----GKDHFSNFGYEEGRSITFNPDLYLTS 575
+ ++ EY AS+ DL L A H++ E RSI F+ YL S
Sbjct: 9 TTGSLESWEYFASYGDLRGWALLDGVLNAADSTNAAWHYNMHASAENRSIVFDAWEYLAS 68
Query: 576 YDDLWNVFGSDR------SAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
DL N G+D AAQHYIT+G EGR++G N
Sbjct: 69 NIDLMNWLGADGITDADAIKAAQHYITNGAAEGRSMGTFDSAAYLAANA 117
>gi|329849050|ref|ZP_08264078.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844113|gb|EGF93682.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 932
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 51/407 (12%), Positives = 106/407 (26%), Gaps = 39/407 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS--------SIGGYEKN 259
+ + I T+ G+D + + ++ S+ G +
Sbjct: 508 SWDNVLTGNSGINTLEGQLGNDTYYVQN--SEDHIVEYRNGGVDLVYASVDYSLAGGDTE 565
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T + G++ + + GN N G+D +G +G DT + Y +
Sbjct: 566 YLFLTGTADLNGRGNASANTLAGNGGANRLSGDRGHDRLNGGAGADTLIGATGNDTYVVD 625
Query: 320 RFE-----------NAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTAS 367
+ +D+E+L ID ++L +
Sbjct: 626 NVGDSVSDVDENFFSGGTDVVEASVSWTLGTDLEQLVLTGAAAIDGTGNGLSNVLTGNDA 685
Query: 368 YEDLIQVIGQDVFESMKHFYEFG--LSEGRDITFDSYLY--LGSYDDLRNVFGSDRGAAA 423
L +G D + EG D S Y G + + G+
Sbjct: 686 RNVLTGGLGNDTYYIQNETDRVVELHFEGEDTVISSVSYSLFGRAVETLLLTGTGNLNGT 745
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ + + + + + DL++ +G
Sbjct: 746 GNSLNNTL----TGTDGNNVLDGGTGGDLMSGGLGNDTYYVDNFYDNVAELHLQGN---- 797
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA---SHEDLINAF 540
D+ +Y A + G + +++L
Sbjct: 798 DTVYASVTYSFFGRAAEVLILTGAGNINGTGNSLVNTLIGNSGANVLDGAGGNDNLTGGA 857
Query: 541 ADAPDLVQAG--KDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGS 585
L AG D ++F + S+ N + L + G+
Sbjct: 858 GADVFLFSAGSRADTVTDFNAADNDSLNVNAYTGGVANAGLVSQTGN 904
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/369 (14%), Positives = 99/369 (26%), Gaps = 25/369 (6%)
Query: 196 GAPKGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G + G+ Y I D G +L+ + + + +
Sbjct: 427 GGTLVNNGDGTYSWTPPANYFGPIGLSYKISDGQGANLIVTRSFEVARVTDTIFNSNSTR 486
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ Y +N+T+ GN +GNS +NV +SG + +G G DT++
Sbjct: 487 LDQYSENLTL----------TGRGNIKGVGNSWDNVLTGNSGINTLEGQLGNDTYYVQNS 536
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC--IDSVNVKQRSILEYTASYED 370
I + N + F ++ + L
Sbjct: 537 --EDHIVEYRNGGVDLVYASVDYSLAGGDTEYLFLTGTADLNGRGNASANTLAGNGGANR 594
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF--GSDRGAAARHYIT 428
L G D + G D + D N F G+D A+ +
Sbjct: 595 LSGDRGHDRLNGGAGADTLIGATGNDTYVVDNVGDSVSDVDENFFSGGTDVVEASVSWTL 654
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH---FSNFGCEEGRFVTFDS 485
E A++ + + DA +++ G + + + + F+
Sbjct: 655 GTDLEQLVLTGAAAIDGTGNGLSNVLTGNDARNVLTGGLGNDTYYIQNETDRVVELHFEG 714
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
+ S ++FG G G L + L
Sbjct: 715 EDTVIS-SVSYSLFGRAVETLL--LTGTGNLNGTGNSLNNTLTGTDGNNVLDGGTGGDLM 771
Query: 546 LVQAGKDHF 554
G D +
Sbjct: 772 SGGLGNDTY 780
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/367 (13%), Positives = 89/367 (24%), Gaps = 41/367 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
N T + D G G T++
Sbjct: 570 TGTADLNGRGNASANTLAGNGGANRLSGDRGHDRLNGGAGADTLIGATGND--------- 620
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCATPMVSDIVAVQKI 194
Y D+ SV D + + +D+ +
Sbjct: 621 ----------------TYVVDNVGDSVSDVDENFFSGGTDVVEASVSWTLGTDLEQLVLT 664
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
A GN + + + G+D + ++L+ E ++
Sbjct: 665 GAAAIDGTGN---GLSNVLTGNDARNVLTGGLGNDTYYIQNET--DRVVELHFEGEDTVI 719
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS---------GLD 305
++ V ++ +GN GNS NN + GN+V DG + G D
Sbjct: 720 SSVS-YSLFGRAVETLLLTGTGNLNGTGNSLNNTLTGTDGNNVLDGGTGGDLMSGGLGND 778
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T++ + VY + + + + I+ + L
Sbjct: 779 TYYVDNFYDNVAELHLQGNDTVYASVTYSFFGRAAEVLILTGAGNINGTGNSLVNTLIGN 838
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ L G D F S G + D L + A A
Sbjct: 839 SGANVLDGAGGNDNLTGGAGADVFLFSAGSRADTVTDFNAADNDSLNVNAYTGGVANAGL 898
Query: 426 YITHGVK 432
G
Sbjct: 899 VSQTGNH 905
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 46/177 (25%), Gaps = 6/177 (3%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS---- 252
+ + G+D + + L
Sbjct: 746 GNSLNNTLTGTDGNNVLDGGTGGDLMSGGLGNDTYYVDNFYDNVAELHLQGNDTVYASVT 805
Query: 253 --IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G + I + G+S + +IGNS NV + GND G +G D F +
Sbjct: 806 YSFFGRAAEVLILTGAGNINGTGNSLVNTLIGNSGANVLDGAGGNDNLTGGAGADVFLFS 865
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
A S + F A +++ + + + AS
Sbjct: 866 AGSRADTVTDFNAADNDSLNVNAYTGGVANAGLVSQTGNHVVINLGGGNVVTVLNAS 922
>gi|229521552|ref|ZP_04410971.1| RTX toxin RtxA [Vibrio cholerae TM 11079-80]
gi|229341650|gb|EEO06653.1| RTX toxin RtxA [Vibrio cholerae TM 11079-80]
Length = 3409
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/222 (13%), Positives = 56/222 (25%), Gaps = 18/222 (8%)
Query: 230 LLDL---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + I+++ +++ G + A + G G+DV +
Sbjct: 3030 TFDFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTS 3089
Query: 287 NVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N+F G+D + G G DT A + + + D
Sbjct: 3090 NIFTGGEGHDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDT 3148
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
S + + + + + + G D ++ G D+
Sbjct: 3149 GSGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNYNRINAGAGNDV 3208
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 3209 VK-----LMGYHAVLNGGDGDDHLIAAAISKFSQFNGGEGRD 3245
Score = 41.7 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 39/294 (13%), Positives = 77/294 (26%), Gaps = 58/294 (19%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
N + + + +F S + D ++ S G D + G
Sbjct: 3014 NLKQNLTADLLNMKEKTFDFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNN 3073
Query: 201 S---LGNNIYKIEVQQKDSPFIQ------------TIYDSGGDDLL-------------- 231
G++++ + ++ G+D
Sbjct: 3074 FWGGRGDDVFYATGTSNIFTGGEGHDMGVLMGRENMMFGGDGNDTAVVAGRINHVFLGAG 3133
Query: 232 -DLTLIGGVKNYIDLNTESWSSIGGYEKN-----------MTIAQHTVIESVVGSSGNDV 279
D + + G ID + + N +TI + +E +GND
Sbjct: 3134 DDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVE---LGAGNDF 3190
Query: 280 VIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
N +GNDV +G G D A S + E ++
Sbjct: 3191 ANVFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIAAAISKFSQFNGGEGRDLMVLG 3250
Query: 331 NEHKQ-DFLSDVERLRFADQCID----SVNVKQRSILEYTASYEDLIQVIGQDV 379
+DV+ + ID + + + + + G D+
Sbjct: 3251 GYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGIDWQKLWFERSGYDL 3304
>gi|163795703|ref|ZP_02189668.1| RTX toxins and related Ca2+-binding protein [alpha proteobacterium
BAL199]
gi|159178999|gb|EDP63534.1| RTX toxins and related Ca2+-binding protein [alpha proteobacterium
BAL199]
Length = 565
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 55/402 (13%), Positives = 109/402 (27%), Gaps = 27/402 (6%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + +D G T+ L I +G + +YG
Sbjct: 37 ADLIYGNQGNDLISAAGGSDTVFGGQDADTVSGDTGLDLIYGNIGDDSLLGGDDADTLYG 96
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ D + + + + + G A
Sbjct: 97 GQGNDIIDGGAGTDVMFGNLGNDIFTNVTG----------AATIYGGQGNDTVAIVTTNT 146
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I +GG D ++ GG N + ++ I G N T++ T
Sbjct: 147 SNTVVFGEEGNDVITTAGGAD----SIFGGQDNDLVSAGQNADLIYGNLGNDTLSGGTGN 202
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G GNDV+ G +V + + GND+ G S DT + + +++I+
Sbjct: 203 DIAYGGQGNDVLSGEDGADVLWGNLGNDILIGGSAADTLYGNDGNDSITGGEGDDSIMGA 262
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVN--VKQRSILEYTASYEDL------IQVIGQDVF 380
N+ L Q ++L A + + + V G V
Sbjct: 263 TGNDLIVAGLGSDTVYGGDGQDTILAATLASGVALLYGGAGNDLISFSGASVNVAGLQVV 322
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH-----YITHGVKEGR 435
S+ + F + G+ +D+ + + G+
Sbjct: 323 YGGDGDDTLFGSKNGTVNFTFAFFGGAGNDVLRGHTGNDLLSGGEGNDTLSGGEGLDTLV 382
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
L +++ + + G D S +
Sbjct: 383 GGIGNDLLLGLSTGSVMYGGEGNDTLSGGDGTDTLSGGAGND 424
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/379 (10%), Positives = 85/379 (22%), Gaps = 44/379 (11%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ I G D + + + I + T+ ++V G
Sbjct: 14 TGTASADVISALAGPDTV----SALDGADLIYGNQGNDLISAAGGSDTVFGGQDADTVSG 69
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------------FYYAPSYLYK 317
+G D++ GN ++ D G G D + +
Sbjct: 70 DTGLDLIYGNIGDDSLLGGDDADTLYGGQGNDIIDGGAGTDVMFGNLGNDIFTNVTGAAT 129
Query: 318 IYRFENAIIVYDANEHKQDFLS----DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
IY + V + + + + + A + ++ + + +
Sbjct: 130 IYGGQGNDTVAIVTTNTSNTVVFGEEGNDVITTAGGADSIFGGQDNDLVSAGQNADLIYG 189
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+G D +G D+ + +L N AA Y G
Sbjct: 190 NLGNDTLSGGTGNDIAYGGQGNDVLSGEDGADVLWGNLGNDILIGGSAADTLYGNDGNDS 249
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD--------------------HFSNF 473
+ ++ ++ ++ G+D +F
Sbjct: 250 ITGGEGDDSIMGATGNDLIVAGLGSDTVYGGDGQDTILAATLASGVALLYGGAGNDLISF 309
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
D L + G R L +
Sbjct: 310 SGASVNVAGLQVVYGGDGDDTLFGSKNGTVNFTFAFFGGAGNDVLRGHTGNDLLSGGEGN 369
Query: 534 EDLINAFADAPDLVQAGKD 552
+ L + G D
Sbjct: 370 DTLSGGEGLDTLVGGIGND 388
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 62/491 (12%), Positives = 120/491 (24%), Gaps = 45/491 (9%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ + D AD+ G I + + G
Sbjct: 14 TGTASADVISALAGPDTVSALDGADLIYGNQGNDLISAAGGSDTVFGGQDADTVSGDTGL 73
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+YG D + Y + ++D G +LG
Sbjct: 74 DLIYGNIGDDSLLGGDDADTLYGGQGNDIIDGGAGTDVMFG----------------NLG 117
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
N+I+ + TIY G+D + + N + E I +I
Sbjct: 118 NDIFT------NVTGAATIYGGQGNDTV-AIVTTNTSNTVVFGEEGNDVITTAGGADSIF 170
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ V D++ GN N+ +GND+ G G D ++
Sbjct: 171 GGQDNDLVSAGQNADLIYGNLGNDTLSGGTGNDIAYGGQGND--VLSGEDGADVLWGNLG 228
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
I+ + L D + + + ++ +G D
Sbjct: 229 NDILIGGSAADT--------LYGNDGNDSITGGEGDDSIMGATGNDLIVAGLGSDTVYGG 280
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG-------VKEGRN 436
+ + + LY G+ +DL + G+ A + G +
Sbjct: 281 DGQDTILAA--TLASGVALLYGGAGNDLISFSGASVNVAGLQVVYGGDGDDTLFGSKNGT 338
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ A A ++ L + G D S + + L LG
Sbjct: 339 VNFTFAFFGGAGNDVLRGHTGNDLLSGGEGNDTLSGGEGLDTLVGGIGNDLLLGLSTGSV 398
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
G + G + + ++ + +
Sbjct: 399 MYGGEGNDTLS---GGDGTDTLSGGAGNDLVFSGSGNDIMSGGDGADSLYATNTLGADTL 455
Query: 557 FGYEEGRSITF 567
G + F
Sbjct: 456 VGGDGADRFVF 466
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 77/294 (26%), Gaps = 23/294 (7%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G++ ++++ G ++ +V +G D G D + I + V+
Sbjct: 3 NITGTTSSELLTGTASADVISALAGPDTVSALDGADLIY--GNQGNDLISAAGGSDTVFG 60
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + L + L G D+ +
Sbjct: 61 GQDADT--------VSGDTGLDLIYGNIGDDSLLGGDDADTLYGGQGNDIIDGGAGTDVM 112
Query: 390 GLSEGRDITFD----SYLYLGSYDDLRNVFGSDRGA-------AARHYITHGVKEGRNPD 438
+ G DI + + +Y G +D + ++ T G +
Sbjct: 113 FGNLGNDIFTNVTGAATIYGGQGNDTVAIVTTNTSNTVVFGEEGNDVITTAGGADSIFGG 172
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
L + DLI L + + G D L L N
Sbjct: 173 QDNDLVSAGQNADLIYGNLGNDTLSGGTGNDIAYGGQGNDVLSGEDGADVLWGN--LGND 230
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
AA Y G + ++ ++ ++ G+D
Sbjct: 231 ILIGGSAADTLYGNDGNDSITGGEGDDSIMGATGNDLIVAGLGSDTVYGGDGQD 284
>gi|119488095|ref|ZP_01621539.1| glycerophosphoryl diester phosphodiesterase [Lyngbya sp. PCC 8106]
gi|119455384|gb|EAW36523.1| glycerophosphoryl diester phosphodiesterase [Lyngbya sp. PCC 8106]
Length = 1121
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 57/172 (33%), Gaps = 12/172 (6%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
S + T+ GDDL+D G + + + S S+ G N I + + G
Sbjct: 942 TGSAEMDTVAGGLGDDLID---GGEGDDVLRGDANSRSTGGTVGGNDEIYGGPGNDRLGG 998
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+GND + G ++ F GND+ DG G DT A
Sbjct: 999 KAGNDFLFGEVGDDEIFGDDGNDLLDGGLGHDTL------TGDDFSGGTGRDTFVLAVGE 1052
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D + D E L +T + D +G DV ++
Sbjct: 1053 GTDLIVDFEV---GIDLFGLKGGLMAEELSFTQAGSDTEVGMGSDVLALLEG 1101
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/213 (12%), Positives = 47/213 (22%), Gaps = 28/213 (13%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
VG ++++ G++ + G+D+ DG G D A S
Sbjct: 933 VGGDASEILTGSAEMDTVAGGLGDDLIDGGEGDDVLRGDANSRSTGGTV----------- 981
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ L A + L +G D
Sbjct: 982 ----------------GGNDEIYGGPGNDRLGGKAGNDFLFGEVGDDEIFGDDGNDLLDG 1025
Query: 392 SEGRDITFDSYLYLGSY-DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G D G+ D G + + + + L + +
Sbjct: 1026 GLGHDTLTGDDFSGGTGRDTFVLAVGEGTDLIVDFEVGIDLFGLKGGLMAEELSFTQAGS 1085
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
D + G + G F
Sbjct: 1086 DTEVGMGSDVLALLEGVNASDLTALMGGESDLF 1118
>gi|1710793|sp|P55128|RTX11_ACTPL RecName: Full=RTX-I toxin determinant A from serotypes 1/9;
AltName: Full=APX-IA; AltName: Full=ApxI; AltName:
Full=Cytolysin IA; Short=CLY-IA; AltName: Full=Hemolysin
IA; Short=HLY-IA
gi|38950|emb|CAA37081.1| hemolysin I [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|505570|emb|CAA48586.1| structural protein A [Actinobacillus pleuropneumoniae]
Length = 1023
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 4/139 (2%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++GS+ D G+ ++F + G+D G+ G D + I+ + +
Sbjct: 717 VEEIIGSNRKDKFFGSRFTDIFHGAKGDDEIYGNDGHDILY--GDDGNDVIHGGDGNDHL 774
Query: 328 YDANEHKQ-DFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKH 385
N + + L D + + ++L A + L G ++F+
Sbjct: 775 VGGNGNDRLIGGKGNNFLNGGDGDDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVG 834
Query: 386 FYEFGLSEGRDITFDSYLY 404
+ G+DI S Y
Sbjct: 835 NDKIYGGLGKDIYRYSKEY 853
Score = 68.3 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 16/131 (12%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDD + G + I + I G + N + + ++G
Sbjct: 731 GSRFTDIFHGAKGDDEI----YGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGG 786
Query: 275 SGNDVVIGNSAN----------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
GN+ + G + NV +GND+ GS G T + KIY
Sbjct: 787 KGNNFLNGGDGDDELQVFEGQYNVLLGGAGNDILYGSDG--TNLFDGGVGNDKIYGGLGK 844
Query: 325 IIVYDANEHKQ 335
I + E+ +
Sbjct: 845 DIYRYSKEYGR 855
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 38/154 (24%), Gaps = 36/154 (23%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + + + + + G GND ++G + N+ GN
Sbjct: 730 FGSRFTDIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGN 789
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D E F Q +
Sbjct: 790 NFLNGGDGDD------------------------------------ELQVFEGQYNVLLG 813
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
IL + +G D +
Sbjct: 814 GAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIY 847
Score = 44.8 bits (104), Expect = 0.051, Method: Composition-based stats.
Identities = 28/246 (11%), Positives = 59/246 (23%), Gaps = 54/246 (21%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----AIIVYD------------ 329
N+ + SSG+ + +G D +Y Y + ++ +
Sbjct: 616 NDRIYLSSGSSIVYAGNGHDVAYYDKTDTGYLTFDGQSAQKAGEYIVTKELKADVKVLKE 675
Query: 330 ------------------------------ANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+D L VE + +++ +
Sbjct: 676 VVKTQDISVGKTCSEKLEYRDYELSPFELGNGIRAKDELHSVEEIIGSNRKDKFFGSRFT 735
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD----ITFDSYLYLGSYDDLRNVF 415
I +++ G D+ +G D + L G ++ N
Sbjct: 736 DIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGG 795
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
D G A + Y + +L + + +
Sbjct: 796 DGDDELQVFE----GQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSK 851
Query: 476 EEGRFV 481
E GR +
Sbjct: 852 EYGRHI 857
>gi|113476200|ref|YP_722261.1| cadherin [Trichodesmium erythraeum IMS101]
gi|110167248|gb|ABG51788.1| Cadherin [Trichodesmium erythraeum IMS101]
Length = 2145
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 51/302 (16%), Positives = 88/302 (29%), Gaps = 19/302 (6%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
G + D R G ++L + L G
Sbjct: 299 GQGGNDQINGNRGNDTVSGGVGNDSIRGGRDADSLLGDAGNDIVLGDRDLDTIRGGEGRD 358
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+YG + + + D ++ G S + G S G
Sbjct: 359 TIYGGKENDDVAGGEDNDFVSGDVGDDIVVGDGGNDTLLGQSGFDTISGGLGFDIISGGQ 418
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + ++ + G+D +D +L GG N + L E +I G +N
Sbjct: 419 DA----DSISGNEDNDSLSGNQGNDTIDGGTGDDSLSGGKDNDLLLGGEGRDTINGERQN 474
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ + + G GND V G +++ G+D G G D+F +Y
Sbjct: 475 DTVDGMEENDFLSGGKGNDSVDGGQGDDLLIGGRGDDTLTGGEGQDSFVIIDFEESDNLY 534
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ D + LRF D I + A+ + L + G D
Sbjct: 535 TVTDFNTAEDLISLEGG-------LRFEDLAISDDGG---DTVIRNANDDILAILTGVDS 584
Query: 380 FE 381
Sbjct: 585 TT 586
Score = 58.3 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 84/310 (27%), Gaps = 46/310 (14%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++ G GND V G ++ GND +G+ G DT + +
Sbjct: 277 DTFFGLGGNDTVFGQGESDSILGQGGNDQINGNRGNDT-----------VSGGVGNDSIR 325
Query: 329 DANEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + D+ +D++ + R + +D+ D
Sbjct: 326 GGRDADSLLGDAGNDIVLGDRDLDTIRGGEGRDTIYGGKENDDVAGGEDNDFVSGDVGDD 385
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G D + D + G D + G ++ + + + ++
Sbjct: 386 IVVGDGGNDTLLGQSGF----DTISGGLGFDIIS--------GGQDADSISGNEDNDSLS 433
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
++ D G EGR + G
Sbjct: 434 GNQGNDTIDGGTGDDSLSGGKDNDLLLGGEGRDTINGERQ-----------NDTVDGMEE 482
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI-- 565
+++ G +++ + LI D G+D F +EE ++
Sbjct: 483 NDFLSGGK-------GNDSVDGGQGDDLLIGGRGDDTLTGGEGQDSFVIIDFEESDNLYT 535
Query: 566 --TFNPDLYL 573
FN L
Sbjct: 536 VTDFNTAEDL 545
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 34/102 (33%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
E + G + + T+ +++ G+ ND ++G ++ G+D G G D
Sbjct: 1945 GGEFNDNFDGDQGDDTLEGLGGNDTLTGNDDNDSLVGGEGDDSIDGGEGDDTLFGGLGAD 2004
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ R ++ + + ++ F
Sbjct: 2005 ILSDDNGDNTFVYTRADDGSEAKFNAANATSISTAIDNGLFD 2046
>gi|326331903|ref|ZP_08198190.1| hemolysin-type calcium-binding region [Nocardioidaceae bacterium
Broad-1]
gi|325950400|gb|EGD42453.1| hemolysin-type calcium-binding region [Nocardioidaceae bacterium
Broad-1]
Length = 598
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/212 (13%), Positives = 60/212 (28%), Gaps = 33/212 (15%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDS-----GGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G+++ + + + T+ G++++ G + + T S+
Sbjct: 198 NTGSGDDVVTVGINPLTGKQVVTVNGQMYEVPPGNEIVIRAGEGNDEINVPQGTNVNLSL 257
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES---------SGNDVFDGSSGL 304
G + + + + ++G G D V ++ GND+ G+ G
Sbjct: 258 LGGRGDDRLNGGSGSDRILGGQGRDHVFAGDGDDRVSGGTDRDYIDAQGGNDLATGAGGD 317
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT + + +I L AD V I
Sbjct: 318 DTVY--GMAGNDRISGGRGQDY-----------------LEGADGDDVLVGGDGNDIASG 358
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + G DV + + G D
Sbjct: 359 GDDNDRIHGGAGDDVSYAGRGTDTTYGGSGDD 390
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 46/141 (32%), Gaps = 10/141 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ ++ GDD + + N + ++ G N I
Sbjct: 270 SGSDRILGGQGRDHVFAGDGDDRVSGGTDRDYIDAQGGNDLATGAGGDDTVYGMAGNDRI 329
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + + G+ G+DV++G N++ ND G +G D YA Y
Sbjct: 330 SGGRGQDYLEGADGDDVLVGGDGNDIASGGDDNDRIHGGAGDD--VSYAGRGTDTTYGGS 387
Query: 323 NAIIVYDANEHKQDFLSDVER 343
A+ D DVE+
Sbjct: 388 GDD---KAHSESGDTDEDVEK 405
>gi|307246322|ref|ZP_07528401.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255306|ref|ZP_07537119.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307259741|ref|ZP_07541462.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|18026877|gb|AAL55666.1|AF240779_1 ApxIA [Actinobacillus pleuropneumoniae]
gi|312899|emb|CAA51548.1| apxIA [Actinobacillus pleuropneumoniae]
gi|606616|gb|AAB05034.1| RTX-1 toxin determinant [Actinobacillus pleuropneumoniae]
gi|306852792|gb|EFM85018.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306861755|gb|EFM93736.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866209|gb|EFM98076.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 1022
Score = 70.6 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 4/139 (2%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++GS+ D G+ ++F + G+D G+ G D + I+ + +
Sbjct: 716 VEEIIGSNRKDKFFGSRFTDIFHGAKGDDEIYGNDGHDILY--GDDGNDVIHGGDGNDHL 773
Query: 328 YDANEHKQ-DFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKH 385
N + + L D + + ++L A + L G ++F+
Sbjct: 774 VGGNGNDRLIGGKGNNFLNGGDGDDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVG 833
Query: 386 FYEFGLSEGRDITFDSYLY 404
+ G+DI S Y
Sbjct: 834 NDKIYGGLGKDIYRYSKEY 852
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 16/131 (12%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDD + G + I + I G + N + + ++G
Sbjct: 730 GSRFTDIFHGAKGDDEI----YGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGG 785
Query: 275 SGNDVVIGNSAN----------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
GN+ + G + NV +GND+ GS G T + KIY
Sbjct: 786 KGNNFLNGGDGDDELQVFEGQYNVLLGGAGNDILYGSDG--TNLFDGGVGNDKIYGGLGK 843
Query: 325 IIVYDANEHKQ 335
I + E+ +
Sbjct: 844 DIYRYSKEYGR 854
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 38/154 (24%), Gaps = 36/154 (23%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + + + + + G GND ++G + N+ GN
Sbjct: 729 FGSRFTDIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGN 788
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D E F Q +
Sbjct: 789 NFLNGGDGDD------------------------------------ELQVFEGQYNVLLG 812
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
IL + +G D +
Sbjct: 813 GAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIY 846
Score = 45.2 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 28/245 (11%), Positives = 59/245 (24%), Gaps = 53/245 (21%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----AIIVYD------------ 329
N+ + SSG+ + +G D +Y Y + ++ +
Sbjct: 616 NDRIYLSSGSSIVYAGNGHDVAYYDKTDTGYLTFDGQSAQKAGEYIVTKELKADVKVLKE 675
Query: 330 -----------------------------ANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+D L VE + +++ +
Sbjct: 676 VVKTQDISVGKRSEKLEYRDYELSPFELGNGIRAKDELHSVEEIIGSNRKDKFFGSRFTD 735
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD----ITFDSYLYLGSYDDLRNVFG 416
I +++ G D+ +G D + L G ++ N
Sbjct: 736 IFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGGD 795
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
D G A + Y + +L + + + E
Sbjct: 796 GDDELQVFE----GQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKE 851
Query: 477 EGRFV 481
GR +
Sbjct: 852 YGRHI 856
>gi|119486637|ref|ZP_01620687.1| putative RTX toxin [Lyngbya sp. PCC 8106]
gi|119456254|gb|EAW37386.1| putative RTX toxin [Lyngbya sp. PCC 8106]
Length = 2412
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 58/318 (18%), Positives = 95/318 (29%), Gaps = 25/318 (7%)
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS--LGNNIYKIEVQQ 213
DS + + D +FG + + G+ G+ ++ +
Sbjct: 2060 DSIEAFEGNDTVFGGIGNDLTFGDQGNDSLLGGDGNDTLIGSNGGNGLAASSAVEENDTI 2119
Query: 214 KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV- 267
+ GDDL+ D GG N I ++ G E N T+ TV
Sbjct: 2120 HGHRNDDLLQGGPGDDLMYSGQEDDFSYGGKGNDIVWGDLGNDTLHGDEGNDTLVGDTVD 2179
Query: 268 -------------IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
I+ V G +G+D + G +N+ GND G D + A S
Sbjct: 2180 ESEIEPERGLSGMIDLVWGGAGDDFINGGRSNDTLSGGVGNDTVRGGKEDDLIYGEAGSD 2239
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
L + + D N+ + + E + A IL + L
Sbjct: 2240 LMYGDLGNDQLCGGDGNDSLYGDIDNQESIGDAPGRDTICGGNGNDILFGNEDQDRLCGG 2299
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
D +G D F D + G+DR T +++
Sbjct: 2300 TDNDTLYGGLAEDTLAGEQGDDWLFGDQGD----DLISGGSGADRFILLSGSGTDTIQDF 2355
Query: 435 RNPDAFKALEYIASHEDL 452
+ F AL S + L
Sbjct: 2356 QLGTDFIALGGGLSFDGL 2373
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/287 (11%), Positives = 68/287 (23%), Gaps = 8/287 (2%)
Query: 204 NNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ ++ ++ G+D L + G E +I G+ +
Sbjct: 2069 DTVFGGIGNDLTFGDQGNDSLLGGDGNDTLIGSNGGNGLAA-SSAVEENDTIHGHRNDDL 2127
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + +D G N++ + GND G G DT
Sbjct: 2128 LQGGPGDDLMYSGQEDDFSYGGKGNDIVWGDLGNDTLHGDEGNDTLVGDTVDESEIEPER 2187
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ ++ D + + + + + G D+
Sbjct: 2188 GLSGMIDLVWGGAGD-----DFINGGRSNDTLSGGVGNDTVRGGKEDDLIYGEAGSDLMY 2242
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ +G D + S D G + ++
Sbjct: 2243 GDLGNDQLCGGDGNDSLYGDIDNQESIGDAPGRDTICGGNGNDILFGNEDQDRLCGGTDN 2302
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
Y ED + L D + G RF+
Sbjct: 2303 DTLYGGLAEDTLAGEQGDDWLFGDQGDDLISGGSGADRFILLSGSGT 2349
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/322 (13%), Positives = 79/322 (24%), Gaps = 19/322 (5%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+ N ID + + + G + + +S+ GND V G N++ F
Sbjct: 2025 SAFNAFDNVIDGSDNADDIVAGSLGSDVVFAFGGDDSIEAFEGNDTVFGGIGNDLTFGDQ 2084
Query: 294 GNDVFDGSSGLDTFF-YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
GND G G DT + L E ++ + + L+
Sbjct: 2085 GNDSLLGGDGNDTLIGSNGGNGLAASSAVEENDTIHGH--------RNDDLLQGGPGDDL 2136
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
+ ++ + + +G D + + + L DL
Sbjct: 2137 MYSGQEDDFSYGGKGNDIVWGDLGNDTLHGDEGNDTLVGDTVDESEIEPERGLSGMIDLV 2196
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHF 470
D +I G ED + +G D
Sbjct: 2197 WGGAGD------DFINGGRSNDTLSGGVGNDTVRGGKEDDLIYGEAGSDLMYGDLGNDQL 2250
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
+ + D+ +G + G + + L
Sbjct: 2251 CGGDGNDSLYGDIDNQESIGDAPGRDTICGGNGNDIL--FGNEDQDRLCGGTDNDTLYGG 2308
Query: 531 ASHEDLINAFADAPDLVQAGKD 552
+ + L D G D
Sbjct: 2309 LAEDTLAGEQGDDWLFGDQGDD 2330
>gi|260820674|ref|XP_002605659.1| hypothetical protein BRAFLDRAFT_279941 [Branchiostoma floridae]
gi|229290994|gb|EEN61669.1| hypothetical protein BRAFLDRAFT_279941 [Branchiostoma floridae]
Length = 606
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 43/196 (21%), Positives = 59/196 (30%), Gaps = 49/196 (25%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L YW + Y+ T + + + R A WS V LTF E
Sbjct: 120 LVGYYWQKKNLTYRIVRTTPQLSPYVV-------HDAIRRAFNVWSDVTPLTFTEMFHGE 172
Query: 74 ---------SIHSDIK-FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H D F N R + +FD+ + W +G L
Sbjct: 173 ADIMIDFLWGFHGDGNPFDGPGNTLAHAFFPGPRRGGDTHFDEEEKWTM-TKEGANLFQV 231
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A HE GHALGL H +N + D
Sbjct: 232 ATHEFGHALGLGHSSEHNTIMGPFYRYRD---------------------------PLQL 264
Query: 184 MVSDIVAVQKIYGAPK 199
DI +Q++YGAP+
Sbjct: 265 TEDDIRGIQQLYGAPE 280
>gi|73621155|sp|Q9EV30|LKA2A_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762036|gb|AAG40296.1|AF314512_1 leukotoxin [Mannheimia haemolytica]
Length = 953
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 2/117 (1%)
Query: 223 YDSGGDDLLDLT--LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
D L +IG N I ++ + G + TI + + + G G+D++
Sbjct: 700 AGYYTKDTLTTIEEIIGTSHNDIFRGSKFNDAFQGGDGVDTIDGNDGNDRLFGGKGDDII 759
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
G + ++ GND+ G G D F + I + + ++ + +D
Sbjct: 760 DGGNGDDFIDGGKGNDLLHGGRGDDIFVHRKGDGNDIISDSDGNDKLSFSDSNLKDL 816
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 8/112 (7%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ T G + N ++++ G+ GND + G +++ +G+D DG G
Sbjct: 715 IGTSHNDIFRGSKFNDAFQGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGN 774
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
D + + ++ D +L F+D + +
Sbjct: 775 D--LLHGGRGDDIFVHRKGDGNDIISDSDGND------KLSFSDSNLKDLTF 818
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 9/137 (6%)
Query: 212 QQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ I+ I + +D+ D G + ID N + G + + I
Sbjct: 704 TKDTLTTIEEIIGTSHNDIFRGSKFNDAFQGGDGVDTIDGNDG-NDRLFGGKGDDIIDGG 762
Query: 266 TVIESVVGSSGNDVVIGNSANNVF--FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G GND++ G +++F + GND+ S G D + + +
Sbjct: 763 NGDDFIDGGKGNDLLHGGRGDDIFVHRKGDGNDIISDSDGNDKLSFSDSNLKDLTFEKVK 822
Query: 324 AIIVYDANEHKQDFLSD 340
+V + ++ + +
Sbjct: 823 YNLVITNSNKEKVTIQN 839
Score = 47.1 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 28/211 (13%), Positives = 49/211 (23%), Gaps = 39/211 (18%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYA 311
+G+D V S G D S G + F
Sbjct: 609 AKLGAGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETVQGSYTVNRFVETG 668
Query: 312 PSYLYKIYRFENAIIVYD-------------ANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ + + A + +D L+ +E + K
Sbjct: 669 KALHEVTSTHTALVGSREEKIEYRHSNNRQHAGYYTKDTLTTIEEIIGTSHNDIFRGSKF 728
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ + + G D K G D ++ G +DL + G
Sbjct: 729 NDAFQGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLH--GGR 781
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASH 449
H G + D L + S+
Sbjct: 782 GDDIFVHRKGDGNDIISDSDGNDKLSFSDSN 812
>gi|1708215|sp|P55118|LKA11_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|397992|gb|AAB36689.1| LktA [Mannheimia haemolytica]
Length = 953
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 22/266 (8%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T + F +N D+ + + V + G G + + EI
Sbjct: 572 TDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIVAKLGAGDDNVFVGSGTTEIDGGE 631
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA-V 191
G G Y +D E + +V + + T +V + +
Sbjct: 632 GYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VETGKALHEGTSTHTALVGNREEKI 689
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ + + G Y + K ++ I + +D+ +
Sbjct: 690 EYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFN-------------D 730
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + TI + + G G+D++ G + ++ GND+ G G D F +
Sbjct: 731 AFNGGDGVDTIDGKDGNDRLFGGKGDDIIDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRQ 790
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDF 337
I + + ++ + +D
Sbjct: 791 GDGNDIITDSDGNDKLSFSDSNLKDL 816
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 62/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I +G+D V
Sbjct: 571 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-VAKLGAGDDNVF 619
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 620 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKALHEGTSTHT 679
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L VE + K +
Sbjct: 680 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVD 739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 740 TIDGKDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRQGD 792
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + D L + S+
Sbjct: 793 GNDIITDSDGNDKLSFSDSN 812
>gi|119508876|ref|ZP_01628028.1| hypothetical protein N9414_20890 [Nodularia spumigena CCY9414]
gi|119466405|gb|EAW47290.1| hypothetical protein N9414_20890 [Nodularia spumigena CCY9414]
Length = 1434
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 65/191 (34%), Gaps = 22/191 (11%)
Query: 199 KGSLGNNIYKIEVQQKDSPF-IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ N + + F +++ G+D+L GG+ N + + G +
Sbjct: 1223 SDTPTNPVGGADDNILVGTFENDSLFGLAGNDIL----YGGLGNDYLFGSAGDDLLDGGD 1278
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---------- 307
N + +++ G +GND + G + +N+ GND+ G +G +T
Sbjct: 1279 GNDALFGGDGNDTLRGGAGNDYLTGGAGDNLLDGGYGNDILYGGAGNNTLLGGAGDDIIY 1338
Query: 308 ------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ I+ V A D +++ ++ + S + +
Sbjct: 1339 SGSGQNLINGGAGNDIIFLNGGQDTVAIAQGEGVDTINNF-QVSLGQRIGLSGGLSFDEL 1397
Query: 362 LEYTASYEDLI 372
+ + LI
Sbjct: 1398 TLTQSGMDTLI 1408
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 67/235 (28%), Gaps = 33/235 (14%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D ++L + + + G +N ++ + + G GND + G++ +++
Sbjct: 1214 DAGSVSLTISDTPTNPVGGADDNILVGTFENDSLFGLAGNDILYGGLGNDYLFGSAGDDL 1273
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
GND G G DT D+L+
Sbjct: 1274 LDGGDGNDALFGGDGNDTL----------------------RGGAGNDYLTG------GA 1305
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
IL A L+ G D+ S G DI F + G
Sbjct: 1306 GDNLLDGGYGNDILYGGAGNNTLLGGAGDDIIYSGSGQNLINGGAGNDIIFLN----GGQ 1361
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDL 462
D + G ++ G + G + +F L S D + D
Sbjct: 1362 DTVAIAQGEGVDTINNFQVSLGQRIGLSGGLSFDELTLTQSGMDTLIKTGDETLA 1416
>gi|291567841|dbj|BAI90113.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 558
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 45/131 (34%), Gaps = 7/131 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T+ G+D LD GG N L ++ G + N +
Sbjct: 331 GNDTIYGLAGNDTLIGGKGNDFLD----GGPGNDRLLGGAGHDTLIGGKGNDFLDGGPGN 386
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S+VG G D +IG N+ +G D+ G G D F + I +
Sbjct: 387 DSLVGGPGRDTLIGGKGNDTLNGGAGQDILTGGPGADIFVFGFGESRVAAPDH---ITDF 443
Query: 329 DANEHKQDFLS 339
D K D L+
Sbjct: 444 DIGTDKIDLLN 454
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 53/173 (30%), Gaps = 29/173 (16%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G N + +++ G +GND +IG N+ GND G +G DT
Sbjct: 317 IRGTRGNDLLRGTPGNDTIYGLAGNDTLIGGKGNDFLDGGPGNDRLLGGAGHDTLI--GG 374
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + +D L + K L A + L
Sbjct: 375 KGNDFLDGGPGNDSLVGGP--GRDTL---------------IGGKGNDTLNGGAGQDILT 417
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFD---SYLYLGSYDDLRNVFGSDRGAA 422
G D+ + FG E R D + DL N G D GA
Sbjct: 418 GGPGADI-------FVFGFGESRVAAPDHITDFDIGTDKIDLLNRRGRDIGAP 463
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 17/162 (10%), Positives = 28/162 (17%), Gaps = 6/162 (3%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E +R + A + LI G D + G D
Sbjct: 315 EPIRGTRGNDLLRGTPGNDTIYGLAGNDTLIGGKGNDFLDGGPGNDRLLGGAGHDTLIGG 374
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
N G L + + F ++
Sbjct: 375 KGNDFLDGGPGNDSLVGGPGRDTLIGGKGNDTLNGGAGQDILTGGPGADIFVFGFGESRV 434
Query: 462 LVQVGKDHF------SNFGCEEGRFVTFDSYLYLGSYDDLRN 497
F + GR + + N
Sbjct: 435 AAPDHITDFDIGTDKIDLLNRRGRDIGAPENFTRARNSNAPN 476
>gi|254463006|ref|ZP_05076422.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
HTCC2083]
gi|206679595|gb|EDZ44082.1| hemolysin-type calcium-binding region [Rhodobacteraceae bacterium
HTCC2083]
Length = 773
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 67/490 (13%), Positives = 126/490 (25%), Gaps = 30/490 (6%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ + + + + ++ IN D + G +
Sbjct: 20 IDATQVFFTIGATIGTGGWNWSGIWAGNGSFYSNIN-DTGTFYEGTDGNVYFIPDTWFTT 78
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV-MSYFMPQDSMMDASFGYCATPMVS 186
G A Y P + + + S + SY +DA G +
Sbjct: 79 SGSA--------YVTSAPAFSLSILVDGTSGADVIDASYSDGDGDQVDAGDGSGPSGHED 130
Query: 187 DIVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
I A G + +Y + T+Y D D++ G N
Sbjct: 131 TISAGDGNDSVEAGLEDDIVYGGGGSDTLEGGSGNDTLYG----DTDDVSPGGAPGNDSI 186
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L I G +I + + G GND + G++ + GND DG+ G
Sbjct: 187 LGGSGNDVIFGEGGADSIRGDGAADEIDGGEGNDTIAGDAGADTIRGGLGNDSIDGNDGN 246
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D + + + + S+ + + +
Sbjct: 247 DLI----GADQASDSSTLDWGTLDENGSFAITGASETMNVT-ITTTTNGAGQTANVQSQG 301
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ + + L D + F + +I +D GS+DDL + D+
Sbjct: 302 SPAADGLWVSSLSDPVTTTMTFDSLIENANFEI-YDIDQNTGSWDDLLTIVAIDQDGNQV 360
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ + + ++ + AD V + TFD
Sbjct: 361 PVVFSDLDGLHSVSGDDLNADGNANTGVETTGADDSVTVDIADP-------FVQLIFTFD 413
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
+ S L V + G + + +
Sbjct: 414 NGE-SASNSGLFGVGNMTLDFTVDYDAEPGNDAINGGAGNDTIFAGNGDDSISGGIGSDS 472
Query: 545 DLVQAGKDHF 554
QAG D F
Sbjct: 473 LDGQAGNDFF 482
Score = 45.2 bits (105), Expect = 0.042, Method: Composition-based stats.
Identities = 35/256 (13%), Positives = 75/256 (29%), Gaps = 11/256 (4%)
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L P + + + ++E + S+ + G + SD+ +
Sbjct: 313 LSDPVTTTMTFDSLIENANFEIYDIDQNTGSWDDLLTIVAIDQDGNQVPVVFSDLDGLHS 372
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+ G + GN +E D I D + N +
Sbjct: 373 VSGDDLNADGNANTGVETTGADDSVTVDIADPFVQLIFTFDNGESASN------SGLFGV 426
Query: 254 GGYEKNMTIAQHT--VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY-- 309
G + T+ +++ G +GND + + ++ G+D DG +G D F
Sbjct: 427 GNMTLDFTVDYDAEPGNDAINGGAGNDTIFAGNGDDSISGGIGSDSLDGQAGNDFFNVGE 486
Query: 310 -YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
F+ + F+ E ++ + R+ + Y+ +
Sbjct: 487 GDTAIGGDGDDYFQIVELSETPGAGANIFIQGDEGDETTGDTLNLGTLGDRNEIVYSNTD 546
Query: 369 EDLIQVIGQDVFESMK 384
+ + G E
Sbjct: 547 DAAGGLSGTLTLEDGT 562
Score = 44.4 bits (103), Expect = 0.066, Method: Composition-based stats.
Identities = 39/340 (11%), Positives = 77/340 (22%), Gaps = 9/340 (2%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ +P + DV G +I A EI G
Sbjct: 160 EGGSGNDTLYGDTDDVSPGGAPGNDSILGGSGNDVIFGEGGADSIRGDGAADEIDGGEGN 219
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + G + D + + +G I +
Sbjct: 220 DTIAGDAGADTIRGGLGNDSIDGNDGNDLIGADQASDSSTLDWGTLDENGSFAITGASET 279
Query: 195 YGAPKGSLGNNI-YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+ N VQ + SP ++ S D + + L + I
Sbjct: 280 MNVTITTTTNGAGQTANVQSQGSPAADGLWVSSLSDPV-----TTTMTFDSLIENANFEI 334
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
++N + + GN V + S + SG+D+ +
Sbjct: 335 YDIDQNTGSWDDLLTIVAIDQDGNQVPVVFSDLDGLHSVSGDDLNADGNANTGVETTGAD 394
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA---DQCIDSVNVKQRSILEYTASYED 370
+ + + + ++ + + D +D + A +
Sbjct: 395 DSVTVDIADPFVQLIFTFDNGESASNSGLFGVGNMTLDFTVDYDAEPGNDAINGGAGNDT 454
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ G D G D D
Sbjct: 455 IFAGNGDDSISGGIGSDSLDGQAGNDFFNVGEGDTAIGGD 494
>gi|158336324|ref|YP_001517498.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158306565|gb|ABW28182.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
Length = 1842
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 59/412 (14%), Positives = 107/412 (25%), Gaps = 17/412 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ N D + D G GK T+ E+ L
Sbjct: 706 GGEGNDTILGNSGNDYLSGDQGDDILEGGLGDDTLFGGAGKDTLDGGTGHDELSGGL--- 762
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G D ++ + + +D+++
Sbjct: 763 ---ESDIISGGTGNDTLAGDEGNDVLTGGAGNDILNAGTGDDYWVDGGTGNDVISGGTGN 819
Query: 196 GAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G GN+I + + G+D+L G +
Sbjct: 820 DIVSGGRGNDIVSGGEDDDTVLGGADQDLLTGDAGNDVL----QGDAGLDTLYGGAGNDT 875
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+GG + + + + G +GND + G +V +G+DV G +G D +
Sbjct: 876 LGGGDDADLLKGEAGSDILEGGAGNDTLFGGEEKDVLMGDAGDDVLSGDAGND--YLSGG 933
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLS--DVERLRFADQCIDSVNVKQRSILEYTASYED 370
++ E ++ + + E L L +
Sbjct: 934 EGADQLSGGEGQDVIEGGAGADVISGNTGNDEWLSGNAGNDIVDGGSGNDFLSGGEGADT 993
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L+ G DV + EG D+ +D N F G + TH
Sbjct: 994 LLGGDGNDVVFIDAADTQILGGEGYDVAIVESAEGVVFDAGANSFDEAHGNSGDDVFTHT 1053
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
G AL ++ L A+ G D + E+
Sbjct: 1054 NGAGTPASTTVALFGNGGNDQLSGGSANDYLEGGTGDDTLAGGAGEDTAIAG 1105
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/468 (11%), Positives = 105/468 (22%), Gaps = 24/468 (5%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
T + G + E G +
Sbjct: 51 GGTGNDTLSGGQGNDWMHGDEGGTQNWQQDASGNYTYTGPIDESGAG------FADPNAI 104
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
++D V+ + +D++M D + G
Sbjct: 105 SSGTQNDDLLLGGIGNDVLIGGLGKDAIMGDQGADMIIGGQGDDYWLAGEAGDDTLHGD- 163
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + G+D L +G L + G + +
Sbjct: 164 ---AGDDILSGGEGNDFVTGGVGNDNL----LGNEGQDSLLAGSGADYVDGGTGDDLVDG 216
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G G+D ++G S N++ +GND G +G D ++ +Y +
Sbjct: 217 GEGADTLKGGLGDDKILGQSGNDILMGEAGNDELIGGAGDD-YWMSGGEGSDTLYGEQGH 275
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
I+ D + L + L + + G D
Sbjct: 276 DIM--------DGGEGNDILYGGADDDTMMGGAGDDALFGGEHIDHMDGGTGTDTLYGGH 327
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
EG D+ Y D S G + A+E
Sbjct: 328 GDDNIHGGEGNDLISGEGDQDVLYGDAGQDTISGGAGHDFIDGGVGNDLLSGDEGMDAIE 387
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
++ + + L + G E L + G
Sbjct: 388 GGQGNDTIDGGAGNDGWLSGGEGADLIDGGAGEDVLSGGRGTDTLLGNTGNDVMMGDAGN 447
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D +E ++ + + G+D
Sbjct: 448 DVLDGGEGDDYWV-DGGDGNDLVEGGLGNDVVAGGAGEDTVSGGEGQD 494
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/364 (13%), Positives = 89/364 (24%), Gaps = 9/364 (2%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + + AD G G + + LG
Sbjct: 170 SGGEGNDFVTGGVGNDNLLGNEGQDSLLAGSGADYVDGGTGDDLVDGGEGADTLKGGLGD 229
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G + G + E Y+M D +G ++ +
Sbjct: 230 DKILGQSGNDILMGEAGNDELIGGAGDD--YWMSGGEGSDTLYGEQGHDIMDGGEGNDIL 287
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTES 249
YG + I + G D L D + GG N +
Sbjct: 288 YGGADDDTMMGGAG-DDALFGGEHIDHMDGGTGTDTLYGGHGDDNIHGGEGNDLISGEGD 346
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G TI+ + + G GND++ G+ + GND DG +G D +
Sbjct: 347 QDVLYGDAGQDTISGGAGHDFIDGGVGNDLLSGDEGMDAIEGGQGNDTIDGGAGNDGWLS 406
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL-EYTASY 368
++ + + + + +
Sbjct: 407 GGEGADLIDGGAGEDVLSGGRGTDTLLGNTGNDVMMGDAGNDVLDGGEGDDYWVDGGDGN 466
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ + +G DV EG+DI + + N Y
Sbjct: 467 DLVEGGLGNDVVAGGAGEDTVSGGEGQDIVLGNSGNDLMSGNAGNDIMDGGSGDDTIYGG 526
Query: 429 HGVK 432
G
Sbjct: 527 TGND 530
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 48/336 (14%), Positives = 91/336 (27%), Gaps = 16/336 (4%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S + G + + +D G + +
Sbjct: 234 GQSGNDILMGEAGNDELIGGAGDDYWMSGGEGSDTLYGEQGHDIMDGGEGNDILYGGADD 293
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G ++G ++ D + Y D + G D +
Sbjct: 294 DTMMGGAGDDALFGGEHIDHMDGGTGTDTLYGGHGDDNIHGGEGNDLISGEGDQDVLYGD 353
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G S G + G D ++ G + ID + +
Sbjct: 354 AGQDTISGG----AGHDFIDGGVGNDLLSGDEGMDAIE---GGQGNDTIDGGAGNDGWLS 406
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E I + + G G D ++GN+ N+V +GNDV DG G D ++
Sbjct: 407 GGEGADLIDGGAGEDVLSGGRGTDTLLGNTGNDVMMGDAGNDVLDGGEGDD-YWVDGGDG 465
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ +V A +D +S E + ++ A + +
Sbjct: 466 NDLVEGGLGNDVV--AGGAGEDTVSGGE------GQDIVLGNSGNDLMSGNAGNDIMDGG 517
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
G D + + + + GS++D
Sbjct: 518 SGDDTIYGGTGNDFIDGGQEDSLGQINLVVNGSFED 553
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 58/412 (14%), Positives = 117/412 (28%), Gaps = 24/412 (5%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D G G T+ G G + G D
Sbjct: 1068 GNGGNDQLSGGSANDYLEGGTGDDTLAGGAGEDTAIAGEGNDLISGEAGHDYMDGGAGDD 1127
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ + M + G +D V G + Y I Q
Sbjct: 1128 TLEGGTENDMLVGGDGADALYGGEGSDTLLFDADDTVVD----------GGDGYDIARAQ 1177
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ P + G ++L G + + I G + +I T E++ G
Sbjct: 1178 GNQPVTLDL----GTSQIELAYGSGGDDVFTNSGTENVEIHGEAGDDSITGGTGHENLDG 1233
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND ++ + N++ +G+D+ +G G D A + + + +
Sbjct: 1234 GDGNDTILAGAGNDILSGGAGDDLLEGQEGNDVLSGNAGADTLMGGAGNDTLNFDGDDTF 1293
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV-FESMKHFYEFGLS 392
+DV +L+ +D +++ + A + G ++ +
Sbjct: 1294 DGGDGTDVAKLQSSDGLTLNIDDVSIEEIHGNAGNDQFTSSNGTNIKMYGLAGDDTLTSG 1353
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
G L GS DD+ + G + + G L+ + ++ L
Sbjct: 1354 SG-----SDRLDGGSGDDVLSSSGGNNAL----FGGDGNDSLTTAGGKDTLDGGSGNDTL 1404
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ + L G D + + +G + + F +D
Sbjct: 1405 SSGNGNDSLLGGSGDDLLDGGSGNDTLKGDAGADQLIGGAGNDKLYFDADDT 1456
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 66/483 (13%), Positives = 113/483 (23%), Gaps = 56/483 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + + DV G T++ +
Sbjct: 1232 DGGDGNDTILAGAGNDILSGGAGDDLLEGQEGNDVLSGNAGADTLMGGAGNDTLNFDGDD 1291
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVM----SYFMPQDSMMDASFGYCATPMVSDIVA 190
G + + S+ + Q + + + D +
Sbjct: 1292 TFDGGDGTDVAKLQSSDGLTLNIDDVSIEEIHGNAGNDQFTSSNGTNIKMYGLAGDDTLT 1351
Query: 191 VQKIYGAPKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNY 242
G G+++ ++ +GG D LD TL G N
Sbjct: 1352 SGSGSDRLDGGSGDDVLSSSGGNNALFGGDGNDSLTTAGGKDTLDGGSGNDTLSSGNGND 1411
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND------------------------ 278
L + G N T+ + ++G +GND
Sbjct: 1412 SLLGGSGDDLLDGGSGNDTLKGDAGADQLIGGAGNDKLYFDADDTVVEGGTGTDTAYYQS 1471
Query: 279 --------------VVIGNSANNVFFESSGNDV-FDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ NS N+ ++G V G G DT + S ++
Sbjct: 1472 TSDLNMDIDAAGIETLYANSGNDEITSTNGAKVKLYGQGGNDTL--SSGSGSDRLDGGAG 1529
Query: 324 AIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
++ + S + L D IL A + L G D E
Sbjct: 1530 DDVLTTTGGNNTLKGGSGNDTLSSGDGKDTLDGGSNDDILNAGAGADILKGGSGNDFLEG 1589
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ G D Y D N + + G + D A
Sbjct: 1590 GSGNDQLYGGSGVDTLLGGEGDDSLYADSDNDLLDGGAGNDELFGSTGDNQLLGGDGNDA 1649
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFG 500
L + +L G D +G D + D L G
Sbjct: 1650 LYGVNGSNNLQGGAGLDSLYGGSGDDQLFGDAGNDGLYAGAGNDVLDGGANNDTLIGQEG 1709
Query: 501 SDR 503
+D
Sbjct: 1710 NDT 1712
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 74/576 (12%), Positives = 141/576 (24%), Gaps = 51/576 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ D+ + AD G G+ I I G S N G
Sbjct: 914 GDAGDDVLSGDAGNDYLSGGEGADQLSGGEGQDVIEGGAGADVISGNTGNDEWLSGNAGN 973
Query: 145 PVY--GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+ G ND+ + + D + + VA+ +
Sbjct: 974 DIVDGGSGNDFLSGGEGADTLLGGDGNDVVFIDAADTQILGGEGYDVAIVESAEGVVFDA 1033
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G N + +G + L G N + + G + T+
Sbjct: 1034 GANSFDEAHGNSGDDVFTHTNGAGTPASTTVALFGNGGNDQLSGGSANDYLEGGTGDDTL 1093
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A ++ + GND++ G + ++ +G+D +G + D +Y E
Sbjct: 1094 AGGAGEDTAIAGEGNDLISGEAGHDYMDGGAGDDTLEGGTENDMLV--GGDGADALYGGE 1151
Query: 323 NAIIVYDANEH---KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI------- 372
+ + + D+ R + + Q + + +
Sbjct: 1152 GSDTLLFDADDTVVDGGDGYDIARAQGNQPVTLDLGTSQIELAYGSGGDDVFTNSGTENV 1211
Query: 373 ---QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
G D +G D G+ +D+ + D
Sbjct: 1212 EIHGEAGDDSITGGTGHENLDGGDGNDTIL-----AGAGNDILSGGAGDDLLE----GQE 1262
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G L A ++ L F + +G + D
Sbjct: 1263 GNDVLSGNAGADTLMGGAGNDTL--NFDGDDTFDGGDGTDVAKLQSSDGLTLNIDDVSIE 1320
Query: 490 GSYDDLRN-VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
+ + N F S G + Y G + L+ + + L ++ +
Sbjct: 1321 EIHGNAGNDQFTSSNGTNIKMYGLAGDDTLTSGSGSDRLDGGSGDDVLSSSGGNNALFGG 1380
Query: 549 AGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS 608
G D + G + + + D L + G+D G
Sbjct: 1381 DGNDSLTTAGGK-------DTLDGGSGNDTLSSGNGNDSLL---------------GGSG 1418
Query: 609 GMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYF 644
D L LY D
Sbjct: 1419 DDLLDGGSGNDTLKGDAGADQLIGGAGNDKLYFDAD 1454
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 88/313 (28%), Gaps = 14/313 (4%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV-FFESSGNDVFDGSSGLDTFFYYA 311
+ G + + + + VVG G+D +IG ++V + G+DV G +G DT
Sbjct: 3 VFGTDSSEALFGSEADDVVVGKEGDDTIIGGEGDDVWLSGNEGDDVVKGGTGNDTL--SG 60
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD---VERLRFADQCIDSVNVKQRSILEYTASY 368
++ E + + + FAD S + +L
Sbjct: 61 GQGNDWMHGDEGGTQNWQQDASGNYTYTGPIDESGAGFADPNAISSGTQNDDLLLGGIGN 120
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS-YDDLRNVFGSDRGAAARHYI 427
+ LI +G+D + +G D + + D + S
Sbjct: 121 DVLIGGLGKDAIMGDQGADMIIGGQGDDYWLAGEAGDDTLHGDAGDDILSGGEGNDFVTG 180
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDS 485
G + +L + + + D G D ++ D
Sbjct: 181 GVGNDNLLGNEGQDSLLAGSGADYVDGGTGDDLVDGGEGADTLKGGLGDDKILGQSGNDI 240
Query: 486 YLYLGSYDDLRNVFGSD-----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
+ D+L G D + Y G + L A + ++
Sbjct: 241 LMGEAGNDELIGGAGDDYWMSGGEGSDTLYGEQGHDIMDGGEGNDILYGGADDDTMMGGA 300
Query: 541 ADAPDLVQAGKDH 553
D DH
Sbjct: 301 GDDALFGGEHIDH 313
>gi|300867244|ref|ZP_07111904.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Oscillatoria
sp. PCC 6506]
gi|300334721|emb|CBN57070.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Oscillatoria
sp. PCC 6506]
Length = 445
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 56/183 (30%), Gaps = 16/183 (8%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ + + G + S I + G+D L + G
Sbjct: 236 SQQNTSGIQAGAGNDRVTGSSVSDVINGNQGNDTLS-------------GEGGDDYLRGG 282
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + +++ + + G+ ND + G + ++ GNDV G G D +
Sbjct: 283 KDDDSLSGGVGNDILSGNQANDSLDGGAGDDFLRGGRGNDVLTGGDGNDILIGDLGNDTL 342
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR--SILEYTASYEDLIQV 374
+ ++ D +D L F D + V + + + LIQ
Sbjct: 343 TGGGGADTFVLILGEGLTLDTTTD-RILDFNPGEGDRIGVTGNLSRLTFTQSGSDTLIQF 401
Query: 375 IGQ 377
G
Sbjct: 402 SGS 404
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 38/149 (25%), Gaps = 41/149 (27%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ +GND V G+S ++V + GND G G D
Sbjct: 243 IQAGAGNDRVTGSSVSDVINGNQGNDTLSGEGGDD------------------------- 277
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
LR IL + + L G D +
Sbjct: 278 ------------YLRGGKDDDSLSGGVGNDILSGNQANDSLDGGAGDDFLRGGRGNDVLT 325
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+G DI D L G+D
Sbjct: 326 GGDGNDILIGDLG----NDTLTGGGGADT 350
Score = 39.8 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 40/180 (22%), Gaps = 19/180 (10%)
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
QD + ++ ++ + L G D K G
Sbjct: 234 QDSQQNTSGIQAGAGNDRVTGSSVSDVINGNQGNDTLSGEGGDDYLRGGKDDDSLSGGVG 293
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
DI + D L G D R L ++ LI
Sbjct: 294 NDILSGNQA----NDSLDGGAGDDF--------------LRGGRGNDVLTGGDGNDILIG 335
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ G D F EG + + L + G + + G
Sbjct: 336 DLGNDTLTGGGGADTFVLILG-EGLTLDTTTDRILDFNPGEGDRIGVTGNLSRLTFTQSG 394
Score = 37.5 bits (85), Expect = 7.6, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 25/123 (20%), Gaps = 10/123 (8%)
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G DT + A + S + +
Sbjct: 224 EGTDTVQLTVQDSQQNTSGIQAG-----AGNDRVTGSSVSDVINGNQGNDTLSGEGGDDY 278
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----FDSYLYLGSYDDLRNVFG 416
L + L +G D+ + G D D D L G
Sbjct: 279 LRGGKDDDSLSGGVGNDILSGNQANDSLDGGAGDDFLRGGRGNDVLTGGDGNDILIGDLG 338
Query: 417 SDR 419
+D
Sbjct: 339 NDT 341
>gi|297706970|ref|XP_002830281.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-24-like
[Pongo abelii]
Length = 566
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 48/163 (29%), Gaps = 34/163 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L Q W I Y T D ++ R W KV LTFEE
Sbjct: 79 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRRLFDVWQKVTPLTFEEVPYHE 131
Query: 74 ----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYGI 114
H D G+ P + +FD + W G
Sbjct: 132 IKSDRKEADIMSFFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 189
Query: 115 G--KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 190 ANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHN 232
>gi|332839031|ref|XP_001154045.2| PREDICTED: matrix metalloproteinase-19 [Pan troglodytes]
Length = 505
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 50/162 (30%), Gaps = 38/162 (23%)
Query: 50 NAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF--------- 99
A+ R A +WS V LTF+E + +DI+
Sbjct: 124 TARAALRQAFQDWSNVAPLTFQEVQAGAADIRLSFHGRQSSYCSNTFDGPGRVLAHADIP 183
Query: 100 --MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
++FD+ + W G G L A HE+GHALGL H
Sbjct: 184 ELGSVHFDEDEFWTEGTYHGVNLRIIAAHEVGHALGLGH--------------------- 222
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
Y + + + D+ +Q +YG
Sbjct: 223 -----SRYSQALMAPVYEGYRPHFKLHPDDVAGIQALYGKKS 259
>gi|34495971|ref|NP_900186.1| calcium binding hemolysin [Chromobacterium violaceum ATCC 12472]
gi|34101825|gb|AAQ58193.1| probable calcium binding hemolysin [Chromobacterium violaceum ATCC
12472]
Length = 1943
Score = 70.6 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 69/551 (12%), Positives = 124/551 (22%), Gaps = 72/551 (13%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E D + G T + D D G G T+ +
Sbjct: 23 ELISAGDGDDTLNGYGGDDTLNGGPGNNLLDGGDGDDSLTGGNGHDTLAGGRGDDTLVGG 82
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+ G +DN + +Y + + + + +
Sbjct: 83 VDGDVYLFNLGDGRDLILDNALNKADAADTDPAYRDELRFGAGIAPQDIILQHIGNDLVL 142
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Q G +++ + +I+ I + G + L + + TE
Sbjct: 143 QHRNG------DDSVTIQNWFAGKAFWIENIRFADGTNWTIADL--AQQVLVQTGTEGKD 194
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN---------NVFFESSGNDVFDGSS 302
+ G+ + + ++G G+D + G + NV GND G +
Sbjct: 195 KLKGWIGKDHLIGLGGNDILLGGDGDDTLQGGDGDDWLDGGSGRNVLEGGKGNDTLIGGA 254
Query: 303 GLDTFFYYAPSYLYKIYRFENAII---------------VYDANEHKQDFL--------- 338
D + + I + A D +
Sbjct: 255 DADIYIFNLGDGADVIRETAGVDVSAQDEIRFGAGIAVKDIVAVRVGMDLVLKHANGSDS 314
Query: 339 -----------SDVERLRFADQCI--------DSVNVKQRSILEYTASYEDLIQVIGQDV 379
S VER+ F D + L + LI G DV
Sbjct: 315 VKVEGYFAAAGSRVERIVFVDGTVWAQADLRVTLTGSDGDDTLTGWEGSDVLIGGAGNDV 374
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYL------GSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D G D+ D I GV
Sbjct: 375 LIGNGGSDTLIGGIGNDTLVGGAGSDVYVFEAGHGHDVIAAHNVDVAVTLHDEIRFGV-- 432
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+ + +D++ + D + + G + S
Sbjct: 433 ---GISVSDIRVQQVGDDIVLVHVNGSDSITIQGGFSVEHGWQGQIVFADGSVWLGAELI 489
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ G L + + + G+D
Sbjct: 490 QRVVGMQNGTDGDDLLQGEDGADILDGGAGNDTLIGGNGDDTFRGGAGNDVLVGNKGRDV 549
Query: 554 FSNFGYEEGRS 564
F FG GR
Sbjct: 550 F-EFGLGGGRD 559
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 60/438 (13%), Positives = 108/438 (24%), Gaps = 82/438 (18%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ I + +D + G G ++S + G G D
Sbjct: 783 GGDGNDILIGGNASDTLQGGAGNDVLISVGGSAVLEGGTGNDTLKGGAGRDIYVFNLGDG 842
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ SV Q + + DIV V GN++ V
Sbjct: 843 NDVIINNSVNVSVGHQSEIRLGVGISVS-----DIVVV---------RAGNDVILKHVNG 888
Query: 214 KDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
DS IQ + + + G + + + G + + + +
Sbjct: 889 SDSILIQNWFGAVSAQVGSVIFADGASWTSTQITQWASGVLTGGAGDDLLQGGAGNDVLD 948
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +GND +IG ++ +GNDV DG +G D + + I + V +
Sbjct: 949 GGAGNDTLIGLGGDDTLKGGTGNDVLDGGAGRDVYIFNLGDGQDVIRFDGSNAAVAWSAG 1008
Query: 333 HKQDFLSDV--------------------------------------------------- 341
+ F +
Sbjct: 1009 DEIRFGVGIAVSDIVVVRSGLDVILKHRNGQDGITIQNALTVNANWGGRIAFAGGANWSL 1068
Query: 342 -ERLRFADQC-------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
E L + K ++ + LI G D
Sbjct: 1069 VELLSLSGATLTGTEGKDTLTGGKGNDVIFGLGGDDVLIGADGNDSLFGGAGNDSLNGGN 1128
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
G D+ G DD+ +D ++ G D A Y ++ L
Sbjct: 1129 GADLLEG-----GDGDDVIVGGRTDGTDWREE--RDTLRGGAGNDQLTAAWYGWNN-VLE 1180
Query: 454 NAFADAPDLVQVGKDHFS 471
+ +D +
Sbjct: 1181 GGTGNDTLTGSFARDVYL 1198
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/358 (14%), Positives = 91/358 (25%), Gaps = 60/358 (16%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N + +++ G +GNDV+I + V +GND G +G D + +
Sbjct: 783 GGDGNDILIGGNASDTLQGGAGNDVLISVGGSAVLEGGTGNDTLKGGAGRDIYVFNLGDG 842
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLR----------------------------- 345
I + V +E + V +
Sbjct: 843 NDVIINNSVNVSVGHQSEIRLGVGISVSDIVVVRAGNDVILKHVNGSDSILIQNWFGAVS 902
Query: 346 -------FADQ------------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
FAD +L+ A + L G D +
Sbjct: 903 AQVGSVIFADGASWTSTQITQWASGVLTGGAGDDLLQGGAGNDVLDGGAGNDTLIGLGGD 962
Query: 387 YEFGLSEGRDITFDSYL---YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D+ Y+ + D ++V D AA + A +
Sbjct: 963 DTLKGGTGNDVLDGGAGRDVYIFNLGDGQDVIRFDGSNAAVAWSAGDEIRFGVGIAVSDI 1022
Query: 444 EYIASHEDLINAF--ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
+ S D+I +Q +N+G + L + G+
Sbjct: 1023 VVVRSGLDVILKHRNGQDGITIQNALTVNANWGGRIAFAGGANWSLVELLSLSGATLTGT 1082
Query: 502 DRGAAARH-------YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ + G D +L A ++ L G D
Sbjct: 1083 EGKDTLTGGKGNDVIFGLGGDDVLIGADGNDSLFGGAGNDSLNGGNGADLLEGGDGDD 1140
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/314 (14%), Positives = 88/314 (28%), Gaps = 26/314 (8%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G + I + +S+ G +GND++ G + ++ F GND G +G D
Sbjct: 1530 DTLRGGNVDDWIQGNGGNDSLYGGNGNDLLEGGAGDDGLFGEDGNDTLRGGAGND--VLN 1587
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN--VKQRSILEYTASY 368
+ + ++ D+ + + LR ++LE
Sbjct: 1588 GGDGADLLEGGDGDDVIVGGRTDGTDWREERDTLRGGAGNDQLTAAWYGWNNVLEGGTGN 1647
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN--VFGSDRGAAARHY 426
+ L +DV+ F L +G+D+ D D R+ FG+D +
Sbjct: 1648 DTLTGSFARDVYL-------FNLGDGQDLIIDKAREATDSDVFRDEIRFGADIKESDIQV 1700
Query: 427 ITHGVK------EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK----DHFSNFGCE 476
+ G G++ K + FA
Sbjct: 1701 LRSGNDMVFRHVNGQDSVTVKDWFTDRLYWIEQITFASGVKWTADQLMKQGVPLVGTELG 1760
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ G+ + G+ G+ D L ++ L
Sbjct: 1761 DTLRGGNVDDWIQGNGGNDSLYGGNGNDLLEGGAGDDGL---FGEDGNDTLRGGLGNDTL 1817
Query: 537 INAFADAPDLVQAG 550
+ G
Sbjct: 1818 NGGNGNDTYRFGRG 1831
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/394 (12%), Positives = 98/394 (24%), Gaps = 43/394 (10%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ ++I S + ++ + G + + N + + + + G +
Sbjct: 739 NGSDSILIQNWFSAASAQVGSVIFADGSSWTSVQI-SQWANGLHVGGDGNDILIGGNASD 797
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND--VFDGSSGLDTFFYY-------- 310
T+ + ++ G+ V+ G + N+ +G D VF+ G D
Sbjct: 798 TLQGGAGNDVLISVGGSAVLEGGTGNDTLKGGAGRDIYVFNLGDGNDVIINNSVNVSVGH 857
Query: 311 --------APSYLYKIYRFENAIIVYDANEHKQDFL---------SDVERLRFADQ---- 349
S + ++ L + V + FAD
Sbjct: 858 QSEIRLGVGISVSDIVVVRAGNDVILKHVNGSDSILIQNWFGAVSAQVGSVIFADGASWT 917
Query: 350 --------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+L+ A + L G D + G D+
Sbjct: 918 STQITQWASGVLTGGAGDDLLQGGAGNDVLDGGAGNDTLIGLGGDDTLKGGTGNDVLDGG 977
Query: 402 YL---YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
Y+ + D ++V D AA + A + + S D+I +
Sbjct: 978 AGRDVYIFNLGDGQDVIRFDGSNAAVAWSAGDEIRFGVGIAVSDIVVVRSGLDVILKHRN 1037
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
D + + N + L L + G
Sbjct: 1038 GQDGITIQNALTVNANWGGRIAFAGGANWSLVELLSLSGATLTGTEGKDTLTGGKGNDVI 1097
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L ++ L + G D
Sbjct: 1098 FGLGGDDVLIGADGNDSLFGGAGNDSLNGGNGAD 1131
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 28/80 (35%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
I G N ++ + + G +G+D + G N+ GND +G +G D
Sbjct: 1765 GGNVDDWIQGNGGNDSLYGGNGNDLLEGGAGDDGLFGEDGNDTLRGGLGNDTLNGGNGND 1824
Query: 306 TFFYYAPSYLYKIYRFENAI 325
T+ + +
Sbjct: 1825 TYRFGRGDGADLVQDSGGQD 1844
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 59/344 (17%), Positives = 100/344 (29%), Gaps = 52/344 (15%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G +L D G V ++I N S+ G N + + + G +GND + G + N
Sbjct: 1294 GTELGDTLRGGNVDDWIQGN-GGNDSLYGGNGNDLLEGGAGDDGLFGEAGNDTLRGGAGN 1352
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+V G D+ +G G D ++D L
Sbjct: 1353 DVLNGGDGADLLEGGDGDDVIV--------------GGRTDGTDWREERDTLRGGA---- 1394
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ + + ++LE + L +DV+ F L +G+D+ D
Sbjct: 1395 GNDQLTAAWYGWNNVLEGGTGNDTLTGSFARDVYL-------FNLGDGQDLIIDKAREAT 1447
Query: 407 SYDDLRN--VFGSDRGAAARHYITHGVK------EGRNPDAFKALEYIASHEDLINAFAD 458
D R+ FG+D + + G G++ K + FA
Sbjct: 1448 DSDVFRDEIRFGADIKESDIQVLRSGNDMVFRHVNGQDSVTVKDWFTDRLYWIEQITFAS 1507
Query: 459 ------------APDLVQVGKDHFSNFGCEE--GRFVTFDSYLYLGSYDDLRNVFGSDRG 504
LV G + + + LY G+ +DL D G
Sbjct: 1508 GVKWTADQLMKQGVPLVGTELGDTLRGGNVDDWIQGNGGNDSLYGGNGNDLLEGGAGDDG 1567
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
+ G R L + L D +
Sbjct: 1568 L----FGEDGNDTLRGGAGNDVLNGGDGADLLEGGDGDDVIVGG 1607
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 72/506 (14%), Positives = 131/506 (25%), Gaps = 39/506 (7%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ I + D +R G G ++ + LG N G
Sbjct: 511 ADILDGGAGNDTLIGGNGDDTFRGGAGNDVLVGNKGRDVFEFGLGGGRDQ-INYGVAAAK 569
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ + D + + D + + K K +
Sbjct: 570 MAQYSKGDQIRFLAGIKAADVRVLKSGNDLVLMLANGQDGITI-KNGAVDKMGWAGEVVF 628
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV- 267
+ + + +Q + GG+D + G + + ++ + G + N T+
Sbjct: 629 ADGVRWSAADLQKLIVVGGNDTVK----GSAGDDVLVSVGGTVVLEGGKGNDTLKGGAAH 684
Query: 268 -IESVVGSSGNDVVIGNSAN------------------NVFFESSGNDVFDGS-SGLDTF 307
I GNDV+I NS N ++ +GNDV +G D+
Sbjct: 685 DIYVFNLGDGNDVIINNSVNVSVGHQSEIRLGAGISVSDIVVVRAGNDVILKHVNGSDSI 744
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ Q D + L+ A
Sbjct: 745 LIQNWFSAASAQVGSVIFADGSSWTSVQISQWANGLHVGGDGNDILIGGNASDTLQGGAG 804
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ LI V G V E GRDI LG +D+ +
Sbjct: 805 NDVLISVGGSAVLEGGTGNDTLKGGAGRDIY---VFNLGDGNDVIINNSVNVSVG----H 857
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
++ G + A + D+I + D + ++ + V F
Sbjct: 858 QSEIRLGVGISVSDIVVVRAGN-DVILKHVNGSDSIL--IQNWFGAVSAQVGSVIFADGA 914
Query: 488 YLGSYDDLRNVFGSDRGAAARHYIT--HGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
S + G G A + G L + + L +
Sbjct: 915 SWTSTQITQWASGVLTGGAGDDLLQGGAGNDVLDGGAGNDTLIGLGGDDTLKGGTGNDVL 974
Query: 546 LVQAGKDHFSNFGYEEGRSITFNPDL 571
AG+D + + I F+
Sbjct: 975 DGGAGRDVYIFNLGDGQDVIRFDGSN 1000
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 46/326 (14%), Positives = 72/326 (22%), Gaps = 96/326 (29%)
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
T ++ + G G N + ++ G+D L GG N
Sbjct: 1531 TLRGGNVDDWIQGNGGNDSLYGGN---GNDLLEGGAGDDGLFGEDGNDTL----RGGAGN 1583
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVI--------ESVVGSSGNDVVIG--NSANNVFFE 291
+ + + G + + I +++ G +GND + NNV
Sbjct: 1584 DVLNGGDGADLLEGGDGDDVIVGGRTDGTDWREERDTLRGGAGNDQLTAAWYGWNNVLEG 1643
Query: 292 SSGNDVFDG-----------SSGLDTFFYYAP---------------------------S 313
+GND G G D A S
Sbjct: 1644 GTGNDTLTGSFARDVYLFNLGDGQDLIIDKAREATDSDVFRDEIRFGADIKESDIQVLRS 1703
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-------------------------- 347
++R N + D L +E++ FA
Sbjct: 1704 GNDMVFRHVNGQDSVTVKDWFTDRLYWIEQITFASGVKWTADQLMKQGVPLVGTELGDTL 1763
Query: 348 ------------DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+LE A + L G D G
Sbjct: 1764 RGGNVDDWIQGNGGNDSLYGGNGNDLLEGGAGDDGLFGEDGNDTLRGGLGNDTLNGGNGN 1823
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGA 421
D G DL G
Sbjct: 1824 DTY---RFGRGDGADLVQDSGGQDAL 1846
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 47/137 (34%), Gaps = 2/137 (1%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ + + G +K I+ +++ G G+D + G NN+ G+D G +G
Sbjct: 7 NAGAGTGKTWNGTDKGELISAGDGDDTLNGYGGDDTLNGGPGNNLLDGGDGDDSLTGGNG 66
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT + + + +D + D + D +
Sbjct: 67 HDTL--AGGRGDDTLVGGVDGDVYLFNLGDGRDLILDNALNKADAADTDPAYRDELRFGA 124
Query: 364 YTASYEDLIQVIGQDVF 380
A + ++Q IG D+
Sbjct: 125 GIAPQDIILQHIGNDLV 141
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 51/363 (14%), Positives = 105/363 (28%), Gaps = 58/363 (15%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+D++ + + T + I DV G T++ +
Sbjct: 342 ADLRVTLTGSDGDDTLTGWEGSDVLIGGAGNDVLIGNGGSDTLIGGIGNDTL-------- 393
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP----MVSDIVAVQ 192
G VY + + +D + + + G + V D + +
Sbjct: 394 --VGGAGSDVYVFEAGHGHDVIAAHNVDVAVTLHDEIRFGVGISVSDIRVQQVGDDIVLV 451
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ G+ ++I + + I + G L LI V +
Sbjct: 452 HVNGS------DSITIQGGFSVEHGWQGQIVFADGSVWLGAELIQRVVGMQNGTDG-DDL 504
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG--------- 303
+ G + + ++++G +G+D G + N+V + G DVF+ G
Sbjct: 505 LQGEDGADILDGGAGNDTLIGGNGDDTFRGGAGNDVLVGNKGRDVFEFGLGGGRDQINYG 564
Query: 304 -----------LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----------DVE 342
D + A + ++ + + QD ++
Sbjct: 565 VAAAKMAQYSKGDQIRFLAGIKAADVRVLKSGNDLVLMLANGQDGITIKNGAVDKMGWAG 624
Query: 343 RLRFADQC-------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ FAD + V ++ +A + L+ V G V E K
Sbjct: 625 EVVFADGVRWSAADLQKLIVVGGNDTVKGSAGDDVLVSVGGTVVLEGGKGNDTLKGGAAH 684
Query: 396 DIT 398
DI
Sbjct: 685 DIY 687
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 39/376 (10%), Positives = 83/376 (22%), Gaps = 62/376 (16%)
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
+ + + D+ G G + + G +G + G D
Sbjct: 1310 IQGNGGNDSLYGGNGNDLLEGGAGDDGLFGEAGNDTLRGGAGNDVLNGGDGADLLEGGDG 1369
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN---NIYK 208
D T + +D++ + T V + G+ ++Y
Sbjct: 1370 DDVIVGGRTDGTDWREERDTLRGGAGNDQLTAAWYGWNNVLEGGTGNDTLTGSFARDVYL 1429
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-DLTLIGGVKNYID---LNTESWSSIGGYEKNMTIAQ 264
+ I ++ D+ D G D L + + ++
Sbjct: 1430 FNLGDGQDLIIDKAREATDSDVFRDEIRFGADIKESDIQVLRSGNDMVFRHVNGQDSVTV 1489
Query: 265 H-------TVIESVVGSSGNDV-----------VIGNSANNVFFESSGNDVFDGSSGLDT 306
IE + +SG ++G + + +D G+ G D+
Sbjct: 1490 KDWFTDRLYWIEQITFASGVKWTADQLMKQGVPLVGTELGDTLRGGNVDDWIQGNGGNDS 1549
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ ++ L
Sbjct: 1550 LY-----------GGNGNDLL--------------------------EGGAGDDGLFGED 1572
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L G DV +G D+ + + R+ G
Sbjct: 1573 GNDTLRGGAGNDVLNGGDGADLLEGGDGDDVIVGGRTDGTDWREERDTLRGGAGNDQLTA 1632
Query: 427 ITHGVKEGRNPDAFKA 442
+G
Sbjct: 1633 AWYGWNNVLEGGTGND 1648
Score = 40.5 bits (93), Expect = 0.80, Method: Composition-based stats.
Identities = 50/409 (12%), Positives = 105/409 (25%), Gaps = 51/409 (12%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN------ALHEIG 129
+ + G + D++ + +G G + N H+
Sbjct: 801 GGAGNDVLISVGGSAVLEGGTGNDTLKGGAGRDIYVFNLGDGNDVIINNSVNVSVGHQSE 860
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
LG+ S + + ++ + S S + +
Sbjct: 861 IRLGVGISVSDIVVVRAGNDVILKHVNGSDSILIQNWFGAVSAQVGSVIFADGASWTSTQ 920
Query: 190 AVQKIYGAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
Q G G G+++ + T+ GGDD L G + +D
Sbjct: 921 ITQWASGVLTGGAGDDLLQGGAGNDVLDGGAGNDTLIGLGGDDTL---KGGTGNDVLDGG 977
Query: 247 TESWSSIGG-YEKNMTIAQHTVIESVVGSSGNDVVIGN--SANNVFFESSGNDVF----D 299
I + I +V S+G+++ G + +++ SG DV +
Sbjct: 978 AGRDVYIFNLGDGQDVIRFDGSNAAVAWSAGDEIRFGVGIAVSDIVVVRSGLDVILKHRN 1037
Query: 300 GSSGL---DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE------------RL 344
G G+ + A + + + L+ E +
Sbjct: 1038 GQDGITIQNALTVNANWGGRIAFAGGANWSLVELLSLSGATLTGTEGKDTLTGGKGNDVI 1097
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH-----------------FY 387
+ L A + L G D+ E
Sbjct: 1098 FGLGGDDVLIGADGNDSLFGGAGNDSLNGGNGADLLEGGDGDDVIVGGRTDGTDWREERD 1157
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
G D ++ + + + G+ AR + +G++
Sbjct: 1158 TLRGGAGNDQLTAAWYGWNNVLEGGTGNDTLTGSFARDVYLFNLGDGQD 1206
>gi|159026636|emb|CAO86570.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 576
Score = 70.2 bits (170), Expect = 9e-10, Method: Composition-based stats.
Identities = 63/425 (14%), Positives = 108/425 (25%), Gaps = 38/425 (8%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
T + D D G G I I LG P+
Sbjct: 33 DTIYGYNGNDSINGGDGNDKLFGGTGDDFIDGGFGFDTIDGGLGNDTTSYAFYWGPINAN 92
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY-- 207
SV + + + + G + ++ G + G+
Sbjct: 93 LATGVVSFPGNSVFTDRLISIENLIGTAGNDTIIGNTANNSLFGEAGNDTINGGDGNDKL 152
Query: 208 ---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG---------- 254
+ TI G+D G N +L+T S G
Sbjct: 153 FGGTGDDFIDGGFGFDTIDGGLGNDTTSYAFYWGPINA-NLSTGVVSFPGDSVFTDTLVS 211
Query: 255 -----GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G N TI +T S+ G +GND + G N+ F +G+D DG G DT
Sbjct: 212 IENLIGTAGNDTIIGNTANNSLNGGAGNDSINGGDGNDKLFGGTGDDFIDGGFGFDTIDG 271
Query: 310 YAPSYLYKIYRFEN--------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK---- 357
+ + ++ + N D L +E L +
Sbjct: 272 GLGNDTTSYAFYRGPINANLATGVVSFPGNSVFTDRLISIENLIGTAGNDTIIGNTADNS 331
Query: 358 -----QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
+ + L G D + F G D T ++ + +L
Sbjct: 332 LFGEAGNDTINGGDGNDKLFGGAGNDWIDGGFGFDTIDGGLGNDTTSYAFYWGPINANLS 391
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
S G + ++ + + L + +G D +
Sbjct: 392 TGVVSFPGNSVFTDTLVSIENLIGTAGNDTITGNTADNSLFGEAGNDTINGGLGLDTLTG 451
Query: 473 FGCEE 477
+
Sbjct: 452 GAGND 456
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 56/333 (16%), Positives = 89/333 (26%), Gaps = 29/333 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
N + ++ D D G G I I LG
Sbjct: 127 GNTANNSLFGEAGNDTINGGDGNDKLFGGTGDDFIDGGFGFDTIDGGLGNDTTSYAFYWG 186
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
P+ + SV + + + + G + ++ G + G+
Sbjct: 187 PINANLSTGVVSFPGDSVFTDTLVSIENLIGTAGNDTIIGNTANNSLNGGAGNDSINGGD 246
Query: 205 NIY-----KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG----- 254
+ TI G+D G N +L T S G
Sbjct: 247 GNDKLFGGTGDDFIDGGFGFDTIDGGLGNDTTSYAFYRGPINA-NLATGVVSFPGNSVFT 305
Query: 255 ----------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
G N TI +T S+ G +GND + G N+ F +GND DG G
Sbjct: 306 DRLISIENLIGTAGNDTIIGNTADNSLFGEAGNDTINGGDGNDKLFGGAGNDWIDGGFGF 365
Query: 305 DTFFYYAPSYLYKIYRFEN--------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
DT + + ++ + N D L +E L
Sbjct: 366 DTIDGGLGNDTTSYAFYWGPINANLSTGVVSFPGNSVFTDTLVSIENLIGTAGNDTITGN 425
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ L A + + +G D F
Sbjct: 426 TADNSLFGEAGNDTINGGLGLDTLTGGAGNDFF 458
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/241 (14%), Positives = 65/241 (26%), Gaps = 10/241 (4%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G + TI + +S+ G GND + G + ++ G D DG G DT Y
Sbjct: 25 WYFGLWGDDTIYGYNGNDSINGGDGNDKLFGGTGDDFIDGGFGFDTIDGGLGNDTTSYAF 84
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK---------QRSIL 362
++ + N D L +E L + +
Sbjct: 85 YWGPIN-ANLATGVVSFPGNSVFTDRLISIENLIGTAGNDTIIGNTANNSLFGEAGNDTI 143
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L G D + F G D T ++ + +L S G +
Sbjct: 144 NGGDGNDKLFGGTGDDFIDGGFGFDTIDGGLGNDTTSYAFYWGPINANLSTGVVSFPGDS 203
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
++ + ++ L + G D ++
Sbjct: 204 VFTDTLVSIENLIGTAGNDTIIGNTANNSLNGGAGNDSINGGDGNDKLFGGTGDDFIDGG 263
Query: 483 F 483
F
Sbjct: 264 F 264
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/539 (12%), Positives = 128/539 (23%), Gaps = 41/539 (7%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
GV Y ++ Y D + + G
Sbjct: 14 TPSSASAGVTGWYFGLWGDDTIYGYNGNDSINGGDGNDKLFGGTGDDFIDGGFGFDTIDG 73
Query: 201 SLGNNI--YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
LGN+ Y ++ + G+ + LI T +I G
Sbjct: 74 GLGNDTTSYAFYWGPINANLATGVVSFPGNSVFTDRLISIENLI---GTAGNDTIIGNTA 130
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N ++ +++ G GND + G + ++ G D DG G DT Y
Sbjct: 131 NNSLFGEAGNDTINGGDGNDKLFGGTGDDFIDGGFGFDTIDGGLGNDTTSYAFYWGPIN- 189
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN---------VKQRSILEYTASYE 369
++ + + D L +E L + + +
Sbjct: 190 ANLSTGVVSFPGDSVFTDTLVSIENLIGTAGNDTIIGNTANNSLNGGAGNDSINGGDGND 249
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G D + F G D T ++ +L S G +
Sbjct: 250 KLFGGTGDDFIDGGFGFDTIDGGLGNDTTSYAFYRGPINANLATGVVSFPGNSVFTDRLI 309
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF------ 483
++ + + L + G D + F
Sbjct: 310 SIENLIGTAGNDTIIGNTADNSLFGEAGNDTINGGDGNDKLFGGAGNDWIDGGFGFDTID 369
Query: 484 -----DSYLYLGSYDDLRN-------------VFGSDRGAAARHYITHGVKEGRNPDAFK 525
D+ Y + + VF + T G A
Sbjct: 370 GGLGNDTTSYAFYWGPINANLSTGVVSFPGNSVFTDTLVSIENLIGTAGNDTITGNTADN 429
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHF-SNFGYEEGRSITFNPDLYLTSYDDLWNVFG 584
+L A ++ + AG D F + F+ + +
Sbjct: 430 SLFGEAGNDTINGGLGLDTLTGGAGNDFFRLDNVANRDLITDFSVPADTIILANSLDSTL 489
Query: 585 SDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDY 643
+ + + QF L+ + + + + D++ +
Sbjct: 490 TGAINPGIKGLLFNSGNVDGSVLDAAQFFQGAGLTGGALGDSSG-IYVNTSNGDIWYND 547
Score = 57.5 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 81/250 (32%), Gaps = 9/250 (3%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
N + + D D G G I I LG
Sbjct: 226 GNTANNSLNGGAGNDSINGGDGNDKLFGGTGDDFIDGGFGFDTIDGGLGNDTTSYAFYRG 285
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
P+ SV + + + + G + ++ G + G+
Sbjct: 286 PINANLATGVVSFPGNSVFTDRLISIENLIGTAGNDTIIGNTADNSLFGEAGNDTINGGD 345
Query: 205 NIYK-----IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
K TI G+D G N +L+T S G
Sbjct: 346 GNDKLFGGAGNDWIDGGFGFDTIDGGLGNDTTSYAFYWGPINA-NLSTGVVSFPGNSVFT 404
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ IE+++G++GND + GN+A+N F +GND +G GLDT A + +++
Sbjct: 405 DTL---VSIENLIGTAGNDTITGNTADNSLFGEAGNDTINGGLGLDTLTGGAGNDFFRLD 461
Query: 320 RFENAIIVYD 329
N ++ D
Sbjct: 462 NVANRDLITD 471
>gi|1477457|gb|AAB17220.1| RTX-1 toxin determinant [Actinobacillus pleuropneumoniae]
Length = 1022
Score = 70.2 bits (170), Expect = 9e-10, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 4/139 (2%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++GS+ D G+ ++F + G+D G+ G D + I+ + +
Sbjct: 716 VEEIIGSNRKDKFFGSRFTDIFHGAKGDDEIYGNDGHDILY--GDDGNDVIHGGDGNDHL 773
Query: 328 YDANEHKQ-DFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKH 385
N + + L D + + ++L A + L G ++F+
Sbjct: 774 VGGNGNDRLIGGKGNNFLNGGDGDDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVG 833
Query: 386 FYEFGLSEGRDITFDSYLY 404
+ G+DI S Y
Sbjct: 834 NDKIYGGLGKDIYRYSKEY 852
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 16/131 (12%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDD + G + I + I G + N + + ++G
Sbjct: 730 GSRFTDIFHGAKGDDEI----YGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGG 785
Query: 275 SGNDVVIGNSAN----------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
GN+ + G + NV +GND+ GS G T + KIY
Sbjct: 786 KGNNFLNGGDGDDELQVFEGQYNVLLGGAGNDILYGSDG--TNLFDGGVGNDKIYGGLGK 843
Query: 325 IIVYDANEHKQ 335
I + E+ +
Sbjct: 844 DIYRYSKEYGR 854
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 38/154 (24%), Gaps = 36/154 (23%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + + + + + G GND ++G + N+ GN
Sbjct: 729 FGSRFTDIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGN 788
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D E F Q +
Sbjct: 789 NFLNGGDGDD------------------------------------ELQVFEGQYNVLLG 812
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
IL + +G D +
Sbjct: 813 GAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIY 846
Score = 44.8 bits (104), Expect = 0.046, Method: Composition-based stats.
Identities = 28/245 (11%), Positives = 59/245 (24%), Gaps = 53/245 (21%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----AIIVYD------------ 329
N+ + SSG+ + +G D +Y Y + ++ +
Sbjct: 616 NDRIYLSSGSSIVYAGNGHDVAYYDKTDTGYLTFDGQSAQKAGEYIVTKELKADVKVLKE 675
Query: 330 -----------------------------ANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+D L VE + +++ +
Sbjct: 676 VVKTQDISVGKRSEKLEYRDYELSPFELGNGIRAKDELHSVEEIIGSNRKDKFFGSRFTD 735
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD----ITFDSYLYLGSYDDLRNVFG 416
I +++ G D+ +G D + L G ++ N
Sbjct: 736 IFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGGD 795
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
D G A + Y + +L + + + E
Sbjct: 796 GDDELQVFE----GQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKE 851
Query: 477 EGRFV 481
GR +
Sbjct: 852 YGRHI 856
>gi|13786841|pdb|1HV5|A Chain A, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
gi|13786842|pdb|1HV5|B Chain B, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
gi|13786843|pdb|1HV5|C Chain C, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
gi|13786844|pdb|1HV5|D Chain D, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
gi|13786845|pdb|1HV5|E Chain E, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
gi|13786846|pdb|1HV5|F Chain F, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
Domain Complexed With A Phosphinic Inhibitor
Length = 165
Score = 70.2 bits (170), Expect = 9e-10, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 62/195 (31%), Gaps = 52/195 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + Y+ + + ++ AL WS+V LTF E
Sbjct: 4 LSGGRWEKTDLTYRILRFPWQLVREQV-------RQTVAEALQVWSEVTPLTFTEVHEGR 56
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+DI + + P+ +++FD + W G +GT L
Sbjct: 57 ADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHRE--GDVHFDYDETWTIGDNQGTDLL 114
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH LGL H + ++MS +F Y
Sbjct: 115 QVAAHEFGHVLGLQHT-------------------TAAKALMS--------PFYTFRYPL 147
Query: 182 TPMVSDIVAVQKIYG 196
+ D +Q +YG
Sbjct: 148 SLSPDDRRGIQHLYG 162
>gi|255958997|gb|ACU43586.1| RTX-I toxin determinant A [Actinobacillus pleuropneumoniae]
Length = 1022
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 4/139 (2%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++GS+ D G+ ++F + G+D G+ G D + I+ + +
Sbjct: 716 VEEIIGSNRKDKFFGSRFTDIFHGAKGDDEIYGNDGHDILY--GDDGNDVIHGGDGNDHL 773
Query: 328 YDANEHKQ-DFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKH 385
N + + L D + + ++L A + L G ++F+
Sbjct: 774 VGGNGNDRLIGGKGNNFLNGGDGDDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVG 833
Query: 386 FYEFGLSEGRDITFDSYLY 404
+ G+DI S Y
Sbjct: 834 NDKIYGGLGKDIYRYSKEY 852
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 16/131 (12%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDD + G + I + I G + N + + ++G
Sbjct: 730 GSRFTDIFHGAKGDDEI----YGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGG 785
Query: 275 SGNDVVIGNSAN----------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
GN+ + G + NV +GND+ GS G T + KIY
Sbjct: 786 KGNNFLNGGDGDDELQVFEGQYNVLLGGAGNDILYGSDG--TNLFDGGVGNDKIYGGLGK 843
Query: 325 IIVYDANEHKQ 335
I + E+ +
Sbjct: 844 DIYRYSKEYGR 854
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 38/154 (24%), Gaps = 36/154 (23%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + + + + + G GND ++G + N+ GN
Sbjct: 729 FGSRFTDIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGN 788
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D E F Q +
Sbjct: 789 NFLNGGDGDD------------------------------------ELQVFEGQYNVLLG 812
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
IL + +G D +
Sbjct: 813 GAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIY 846
Score = 44.8 bits (104), Expect = 0.046, Method: Composition-based stats.
Identities = 28/245 (11%), Positives = 59/245 (24%), Gaps = 53/245 (21%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----AIIVYD------------ 329
N+ + SSG+ + +G D +Y Y + ++ +
Sbjct: 616 NDRIYLSSGSSIVYAGNGHDVAYYDKTDTGYLTFDGQSAQKAGEYIVTKELKADVKVLKE 675
Query: 330 -----------------------------ANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+D L VE + +++ +
Sbjct: 676 VVKTQDISVGKRSEKLEYRDYELSPFELGNGIRAKDELHSVEEIIGSNRKDKFFGSRFTD 735
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD----ITFDSYLYLGSYDDLRNVFG 416
I +++ G D+ +G D + L G ++ N
Sbjct: 736 IFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGGD 795
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
D G A + Y + +L + + + E
Sbjct: 796 GDDELQVFE----GQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKE 851
Query: 477 EGRFV 481
GR +
Sbjct: 852 YGRHI 856
>gi|46143512|ref|ZP_00135090.2| COG2931: RTX toxins and related Ca2+-binding proteins
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208908|ref|YP_001054133.1| RTX-I toxin determinant A [Actinobacillus pleuropneumoniae L20]
gi|307257469|ref|ZP_07539236.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|126097700|gb|ABN74528.1| RTX-I toxin determinant A [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|306864049|gb|EFM95965.1| RTX-I toxin determinant A from serotypes 5/10 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 1022
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 4/139 (2%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++GS+ D G+ ++F + G+D G+ G D + I+ + +
Sbjct: 716 VEEIIGSNRKDKFFGSRFTDIFHGAKGDDEIYGNDGHDILY--GDDGNDVIHGGDGNDHL 773
Query: 328 YDANEHKQ-DFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKH 385
N + + L D + + ++L A + L G ++F+
Sbjct: 774 VGGNGNDRLIGGKGNNFLNGGDGDDELQVFEGQYNVLLGGAGNDILYGSDGTNLFDGGVG 833
Query: 386 FYEFGLSEGRDITFDSYLY 404
+ G+DI S Y
Sbjct: 834 NDKIYGGLGKDIYRYSKEY 852
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 16/131 (12%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDD + G + I + I G + N + + ++G
Sbjct: 730 GSRFTDIFHGAKGDDEI----YGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGG 785
Query: 275 SGNDVVIGNSAN----------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
GN+ + G + NV +GND+ GS G T + KIY
Sbjct: 786 KGNNFLNGGDGDDELQVFEGQYNVLLGGAGNDILYGSDG--TNLFDGGVGNDKIYGGLGK 843
Query: 325 IIVYDANEHKQ 335
I + E+ +
Sbjct: 844 DIYRYSKEYGR 854
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 38/154 (24%), Gaps = 36/154 (23%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + + + + + G GND ++G + N+ GN
Sbjct: 729 FGSRFTDIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGN 788
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D E F Q +
Sbjct: 789 NFLNGGDGDD------------------------------------ELQVFEGQYNVLLG 812
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
IL + +G D +
Sbjct: 813 GAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIY 846
Score = 44.8 bits (104), Expect = 0.047, Method: Composition-based stats.
Identities = 28/245 (11%), Positives = 59/245 (24%), Gaps = 53/245 (21%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----AIIVYD------------ 329
N+ + SSG+ + +G D +Y Y + ++ +
Sbjct: 616 NDRIYLSSGSSIVYAGNGHDVAYYDKTDTGYLTFDGQSAQKAGEYIVTKELKADVKVLKE 675
Query: 330 -----------------------------ANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+D L VE + +++ +
Sbjct: 676 VVKTQDISVGKRSEKLEYRDYELSPFELGNGIRAKDELHSVEEIIGSNRKDKFFGSRFTD 735
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD----ITFDSYLYLGSYDDLRNVFG 416
I +++ G D+ +G D + L G ++ N
Sbjct: 736 IFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGNNFLNGGD 795
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
D G A + Y + +L + + + E
Sbjct: 796 GDDELQVFE----GQYNVLLGGAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIYRYSKE 851
Query: 477 EGRFV 481
GR +
Sbjct: 852 YGRHI 856
>gi|209525891|ref|ZP_03274426.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209493700|gb|EDZ94020.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 1168
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 4/116 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D L + L + + G N T+ +++VG +GNDV+ GN +
Sbjct: 972 GTDDPDFILGSASDETL-LGFQGNDFLQGTAGNNTLFGGQGNDTLVGGNGNDVLFGNKDD 1030
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
++ F GND G G DT + +++ + ++Y D L E
Sbjct: 1031 DILFGQGGNDTLFGGQGNDTLI--GGAGNNELWGDKGNDVLY-GGMRGIDTLRGGE 1083
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 48/147 (32%), Gaps = 18/147 (12%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L G L + S ++ G++ N + ++ G GND ++G + N+V F
Sbjct: 966 FPNQLFGTDDPDFILGSASDETLLGFQGNDFLQGTAGNNTLFGGQGNDTLVGGNGNDVLF 1025
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ +D+ G G DT F + ++ + D L
Sbjct: 1026 GNKDDDILFGQGGNDTLF--GGQGNDTLIGGAGNNELW--GDKGNDVLYG---------- 1071
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQ 377
++ L + I V G
Sbjct: 1072 ----GMRGIDTLRGGEGNDTFILVPGD 1094
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 61/208 (29%), Gaps = 43/208 (20%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++GS+ ++ ++G N+ ++GN+ G G DT +++
Sbjct: 977 DFILGSASDETLLGFQGNDFLQGTAGNNTLFGGQGNDTLV-----------GGNGNDVLF 1025
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ IL + L G D E
Sbjct: 1026 GNKD--------------------------DDILFGQGGNDTLFGGQGNDTLIGGAGNNE 1059
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+G D+ + + D LR G+D V + + L +
Sbjct: 1060 LWGDKGNDVLYGGMRGI---DTLRGGEGNDTFILVPGDGYSVVADFQMNQDLIILPGTPA 1116
Query: 449 H---EDLINAFADAPDLVQVGKDHFSNF 473
+ DL FA+A + QV +
Sbjct: 1117 NYEIGDLPQGFANATAIYQVNPPNSETP 1144
>gi|291302473|ref|YP_003513751.1| RTX toxins and related Ca2+-binding protein-like protein
[Stackebrandtia nassauensis DSM 44728]
gi|290571693|gb|ADD44658.1| RTX toxins and related Ca2+-binding protein- like protein
[Stackebrandtia nassauensis DSM 44728]
Length = 717
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 50/183 (27%), Gaps = 9/183 (4%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
N ++ G + + T + D N W + + + TI
Sbjct: 334 NAKGSSNNVSTGLGDDRVFGGDGMERV-YTGPAEAQGPNDPNE-HWDEVHAGKGDDTIVG 391
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + + GNDVV G + N+ G+D G GLD + + L +
Sbjct: 392 GSQTQEIYAGDGNDVVYGAAGNDYLDGQKGDDKLYGGQGLDVAYGLDGADLL----HGGS 447
Query: 325 IIVYDANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ D + + + + ++ + G +
Sbjct: 448 EKDFLEGGQGNDMATGGSGNDAISGGGGDDRMAGDDGDDVFYGGKGHDVVAGGEGANTAH 507
Query: 382 SMK 384
Sbjct: 508 VQA 510
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 83/310 (26%), Gaps = 22/310 (7%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI------GGVKNYIDLNTESWSSIGGY 256
+ I ++ T+ G+D LD+ G + +D + +I
Sbjct: 249 DDTIRTETKEKTGRDGQLTVLSGSGNDKLDMKGQKQEAYTGAGNDTVDAKKIDFGAIATA 308
Query: 257 EKNMTIAQ-HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N + VV D+V ++N G+D G G++ +
Sbjct: 309 GGNDIVNTKDGRNFMVVTGEDRDLVNAKGSSNNVSTGLGDDRVFGGDGMERVYTGPAEAQ 368
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
E+ V+ + Q + ++ A + L
Sbjct: 369 GPNDPNEHWDEVHAGKGDDT--------IVGGSQTQEIYAGDGNDVVYGAAGNDYLDGQK 420
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGVK 432
G D + +G D+ D L G+D G+ G
Sbjct: 421 GDDKLYGGQGLDVAYGLDGADLLHGGS----EKDFLEGGQGNDMATGGSGNDAISGGGGD 476
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ D + Y D++ A +D + + +
Sbjct: 477 DRMAGDDGDDVFYGGKGHDVVAGGEGANTAHVQAEDAVVDARFNRVEISDNNDAFDIKGS 536
Query: 493 DDLRNVFGSD 502
DD ++ +D
Sbjct: 537 DDFKDRVQAD 546
Score = 37.8 bits (86), Expect = 5.7, Method: Composition-based stats.
Identities = 43/353 (12%), Positives = 84/353 (23%), Gaps = 60/353 (16%)
Query: 257 EKNMTIAQHTVIESVVGSS---GNDVVIGNSANN--------VFFESSGNDVFDG----- 300
+ ++ + T ++V ++ GN VV N + + G+D
Sbjct: 200 DGSVVVNTGTGNDNVKVTTDKKGNTVVKVNGVESKYPPEVSVIIRSGQGDDTIRTETKEK 259
Query: 301 -----------SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
SG D + + + + + D
Sbjct: 260 TGRDGQLTVLSGSGNDKLDMKGQKQEAYTGAGNDTVDAKKIDFGAIATAGGNDIVNTKDG 319
Query: 350 CIDSVNVKQR-SILEYTASYEDLIQVIGQDVFESMK--------------------HFYE 388
V + ++ S ++ +G D H+ E
Sbjct: 320 RNFMVVTGEDRDLVNAKGSSNNVSTGLGDDRVFGGDGMERVYTGPAEAQGPNDPNEHWDE 379
Query: 389 FGLSEGRDITFDSY----LYLGSYDDLRNVFGSDRGA-----AARHYITHGVKEGRNPDA 439
+G D +Y G +D+ + + Y G+ D
Sbjct: 380 VHAGKGDDTIVGGSQTQEIYAGDGNDVVYGAAGNDYLDGQKGDDKLYGGQGLDVAYGLDG 439
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF-DSYLYLGSYDDLRNV 498
L + + L + G D S G ++ D Y G D+
Sbjct: 440 ADLLHGGSEKDFLEGGQGNDMATGGSGNDAISGGGGDDRMAGDDGDDVFYGGKGHDVVAG 499
Query: 499 FGSDRGA--AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
A A + I +D + D++ A
Sbjct: 500 GEGANTAHVQAEDAVVDARFNRVEISDNNDAFDIKGSDDFKDRVQADLDMMAA 552
>gi|37524644|ref|NP_927988.1| hypothetical protein plu0643 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784069|emb|CAE12938.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 2123
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/216 (13%), Positives = 59/216 (27%), Gaps = 24/216 (11%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ T S +D++ + LN E + +
Sbjct: 500 SNTLSTQGAGTRVTSTHNDIITTAYASQSETDETLNAEQL----------------GVSN 543
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G SGND +I + +G++ + G +G D F A I+
Sbjct: 544 LYGGSGNDTLIAAKTGSWLVGGAGSNTYVGGAGDDVFVISASDDTKNIHGNGGHDTAIIV 603
Query: 331 NEHKQDFLSDVERLRFA---DQCIDSVNVKQRSIL-EYTASYEDLIQVIGQDVFESMKHF 386
+ L A ++ + + + LI +G DV
Sbjct: 604 GNQGVELNMGQASLTIAEGGSGNDTIISGSVNGVFIKGGSGNSTLIGGMGNDVLVGGSGH 663
Query: 387 YEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSD 418
G+ + + +Y + + G D
Sbjct: 664 NTIVGGTGKSVIYAGPQGDTIYASKDGSIIHAGGGD 699
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 65/203 (32%), Gaps = 16/203 (7%)
Query: 196 GAPKGS--LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G+ G++++ I I+ +GG D ++G +++ S +
Sbjct: 567 GSNTYVGGAGDDVFVISASDDTKN----IHGNGGHDT--AIIVGNQGVELNMGQASLTIA 620
Query: 254 GGYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G N TI +V + G SGN +IG N+V SG++ G +G + Y P
Sbjct: 621 EGGSGNDTIISGSVNGVFIKGGSGNSTLIGGMGNDVLVGGSGHNTIVGGTGK-SVIYAGP 679
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +II + K + + +I+ ++ D
Sbjct: 680 QGDTIYASKDGSIIHAGGGDDKIFGGVGDDVIEVGHGNATIDGDGGVNIVSLHGNHGDYQ 739
Query: 373 ------QVIGQDVFESMKHFYEF 389
+ D
Sbjct: 740 ITRTDSGYVVADKVAGRDGTVTL 762
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/329 (14%), Positives = 97/329 (29%), Gaps = 45/329 (13%)
Query: 59 LGEWSKV-VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
L EW +++ + D + ++ + + ++ D G G
Sbjct: 450 LAEWGITQINVRASNKTDVRDGNKVVASGSFTINGKTQEVLAVDFLGDPVSNTLSTQGAG 509
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T ++ I A GV N Y T + + S
Sbjct: 510 TRVTSTHNDIITTAYASQSETDETLNAEQLGVSNLYGGSGNDTLIAAKTGSWLVGGAGSN 569
Query: 178 GYCATPM-------VSDIVAVQKIYGAPKGS--LGNNIYKIEVQQKDSPFIQTIYDSGGD 228
Y SD G + +GN ++ + Q + G+
Sbjct: 570 TYVGGAGDDVFVISASDDTKNIHGNGGHDTAIIVGNQGVELNMGQASLTIAE---GGSGN 626
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN----- 283
D + +I + S++ G N + + ++VG +G V+
Sbjct: 627 DTI--ISGSVNGVFIKGGSG-NSTLIGGMGNDVLVGGSGHNTIVGGTGKSVIYAGPQGDT 683
Query: 284 -------------SANNVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRF 321
++ F G+D DG G++ + Y+I R
Sbjct: 684 IYASKDGSIIHAGGGDDKIFGGVGDDVIEVGHGNATIDGDGGVNIVSLHGNHGDYQITRT 743
Query: 322 ENAIIVYD--ANEHKQDFLSDVERLRFAD 348
++ +V D A L ++++L F+D
Sbjct: 744 DSGYVVADKVAGRDGTVTLKNIQKLNFSD 772
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 69/185 (37%), Gaps = 21/185 (11%)
Query: 151 NDYENDSFLTSVMSYFM-----PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
++ +F S MS + + S + P+ + +++ +YG+ S ++
Sbjct: 1331 GSSQSGTFKYSFMSTHDLGERSAGNWTLQVSDAHSGLPVTLNAWSLR-LYGSKSTS--DD 1387
Query: 206 IYKIEV----QQKDSPFIQTIYDS-----GGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
Y + D+ GG + L+ + + ++L T S G
Sbjct: 1388 TYFYTDEYIQSVVGQANRAVLDDAVNGVAGGRNTLNAAAVSRDTS-VNLLTGVASIGGTA 1446
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+TI + I+++V GND ++ +A+ + GN+ G +G D F +
Sbjct: 1447 ---LTIKNPSGIQNIVTGDGNDTLVAGNADALLDGGRGNNTLAGGAGKDFFVVHHREAGS 1503
Query: 317 KIYRF 321
+
Sbjct: 1504 DVISN 1508
>gi|329848426|ref|ZP_08263454.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843489|gb|EGF93058.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 817
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/367 (14%), Positives = 96/367 (26%), Gaps = 44/367 (11%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + + E+ ++ A+ S ++ E ++ + NG
Sbjct: 335 DTYVVNTAGDQVIEVADGGADLVESAI---SLILAAEVESLTLTGSGNLHGTGNGGNNLI 391
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D G G T + + V+
Sbjct: 392 TGGAGANRLDGMAGNDTLIGGTGNDTYYIDSLSDRV--------------------VELH 431
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
YE + + +SY + M D V GN + Q
Sbjct: 432 YEGTDLIYTSVSY-------SLFGRAVESLIMTGDGDLVVTGNSLANTITGN---GGDNQ 481
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-----DLNTESWSS-IGGYEKNMTIAQHT 266
T+ GDD + + + DL S S + G I
Sbjct: 482 LNGGGGNDTLIGGLGDDTYYVDSLSDRVEELHYEGTDLIYTSVSYSLFGRAIESVIMTGD 541
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V+G+S + + GNS +N GND G +G D+ Y + + +
Sbjct: 542 GDLVVIGNSLANRITGNSGDNHLNGGGGNDTLIGGTGDDS--YTVDAAGDIVTEAASEGT 599
Query: 327 VYDANEHKQDFLSDVERLRFADQCI---DSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+++E L ++L +++ L G D
Sbjct: 600 DLVLAYTTYTLGAEIENLTMIGSIYWGQSGTGNALNNVLAGNSNHNILDGRAGDDTLVGG 659
Query: 384 KHFYEFG 390
+
Sbjct: 660 DGHDTYY 666
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 70/428 (16%), Positives = 118/428 (27%), Gaps = 17/428 (3%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
ND+ + + D +G + ++YG N Y V
Sbjct: 28 GNDTIRGLGGNDTLWGSDGNDLLYGGAGNDRLLGWFGYDRLYG-----EAGNDYLDGVVM 82
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
T G D +D GG I ES+S G +N+ + + E G
Sbjct: 83 VGGTGDDTYEFDVGVDTVDERPDGGTDTLI--VGESYSLYGLNIENLVLRYYGDFE-ATG 139
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ + + GNS N ++G D G G DT+ + V +
Sbjct: 140 NLFANYLTGNSGRNRLDGAAGADSLAGGQGDDTYVVDESGDVVLEDANAGVDTVIAGVSY 199
Query: 334 KQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D +E L + +D+ + L + L +G D + +
Sbjct: 200 SLD-GRHIEILTLSGSANLDAAGNDLANTLTGNSGNNLLDGGLGSDTMAGGLGDDIYLVD 258
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK-EGRNPDAFKALEYIASHED 451
D+ ++ FG A +T + L A H
Sbjct: 259 HAGDVVKEARGEGADTILSSVSFGLRGVHAEVLTLTGTQDIDVTGNSLANRLNGNAGHNR 318
Query: 452 LINAFADAPDLVQVGKDHFS-NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
L G D + N ++ V + S L +
Sbjct: 319 LDGGTGYDTLAGGAGNDTYVVNTAGDQVIEVADGGADLVESAISLILAAEVESLTLTGSG 378
Query: 511 ITHGVKEGRN-----PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
HG G N L+ +A ++ LI + + + D YE I
Sbjct: 379 NLHGTGNGGNNLITGGAGANRLDGMAGNDTLIGGTGNDTYYIDSLSDRVVELHYEGTDLI 438
Query: 566 TFNPDLYL 573
+ L
Sbjct: 439 YTSVSYSL 446
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 70/479 (14%), Positives = 113/479 (23%), Gaps = 31/479 (6%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T R D D+ G G +L + G Y G + G
Sbjct: 29 NDTIRGLGGNDTLWGSDGNDLLYGGAGNDRLLGWFGYDRLYGEAG----NDYLDGVVMVG 84
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN---- 204
D + + P G + +I + Y + GN
Sbjct: 85 GTGDDTYEFDVGVDTVDERPDGGTDTLIVGESYSLYGLNIENLVLRYYGDFEATGNLFAN 144
Query: 205 --NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + ++ GDD + G D N + I G ++
Sbjct: 145 YLTGNSGRNRLDGAAGADSLAGGQGDDTY-VVDESGDVVLEDANAGVDTVIAGVSYSL-- 201
Query: 263 AQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI--- 318
IE + S N GN N +SGN++ DG G DT +Y +
Sbjct: 202 -DGRHIEILTLSGSANLDAAGNDLANTLTGNSGNNLLDGGLGSDTMAGGLGDDIYLVDHA 260
Query: 319 ------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
R E A + + + Q ID + L A + L
Sbjct: 261 GDVVKEARGEGADTILSSVSFGLRGVHAEVLTLTGTQDIDVTGNSLANRLNGNAGHNRLD 320
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D + ++ D + + + G
Sbjct: 321 GGTGYDTLAGGAGNDTYVVNTAGDQVIEVADGGADLVESAISLILAAEVESLTLTGSGNL 380
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE----EGRFVTFDSYLY 488
G + A L + + G D + E + D
Sbjct: 381 HGTGNGGNNLITGGAGANRLDGMAGNDTLIGGTGNDTYYIDSLSDRVVELHYEGTDLIYT 440
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF---KALEYIASHEDLINAFADAP 544
SY S + G L ++ LI D
Sbjct: 441 SVSYSLFGRAVESLIMTGDGDLVVTGNSLANTITGNGGDNQLNGGGGNDTLIGGLGDDT 499
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 49/282 (17%), Positives = 89/282 (31%), Gaps = 15/282 (5%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND- 152
Y S + V G G ++ ++ + I G H G + G D
Sbjct: 521 YTSVSYSLFGRAIESVIMTGDGDLVVIGNSLANRITGNSGDNHLNGGGGNDTLIGGTGDD 580
Query: 153 -YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP--KGSLGNNIYKI 209
Y D+ V ++ A Y + ++ + IY G+ NN+
Sbjct: 581 SYTVDAAGDIVTEAASEGTDLVLAYTTYTLGAEIENLTMIGSIYWGQSGTGNALNNVLAG 640
Query: 210 EVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-------SWSSIGGYEKN 259
T+ G D + +G L S+S G + +
Sbjct: 641 NSNHNILDGRAGDDTLVGGDGHDTYYVDSVGDKVVEAYLQGTDEIEASVSYSLHGTHIEL 700
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +A + + G+S +V++GNS NNV G+D G G D F + + + I
Sbjct: 701 LRLA-GSEDLTATGNSMGNVLVGNSGNNVLNGKGGSDYLYGGLGSDVFLFESINAHEYIG 759
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
F A +++ + + + I
Sbjct: 760 DFTAAHADIINLNGWTGGVANTGAVTQSGADVLITAGGWNDI 801
>gi|229465792|gb|ACQ67566.1| putative RTX-family protein-7 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 1968
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 41/113 (36%), Gaps = 3/113 (2%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTI-AQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G + I ++ ++ G + N I A + + G +GND ++ NN + +GN
Sbjct: 1759 GAGDDLIIDHSHHHRTLHGGDGNDRIIATGNGNKWLYGDAGNDTILAYEGNNFIYGGTGN 1818
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD--FLSDVERLRF 346
D G G D + I + + + + + E L F
Sbjct: 1819 DFLSGGVGDDIYLITPNDGHTVIEDTGGNDTLILYGMDEGEFHTIEEGEDLVF 1871
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 66/201 (32%), Gaps = 22/201 (10%)
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK---------IY 195
P+ + E D +V + ++ D +AV
Sbjct: 1227 PINDYIDANEEDDNNPTVKKISSDETAITKGESTALFDLGDGDDIAVGYRARKNFFKITK 1286
Query: 196 GAPKGSLGN--NIYKIEVQQKDSPFIQTIY---DSGGDDLL--DLTLIGGVKNYIDLNTE 248
GA + + GN +I+ + ++ + G+D + D L+ V+ +IDL
Sbjct: 1287 GAKQYTGGNKPDIFYLSNTSLNTDESMLLSKFDGLAGEDTIVFDQVLLRDVRYFIDLTVG 1346
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
G +A IE V G+S N+ + GN+ NN G D G G D
Sbjct: 1347 QI-YSGSRNNKKLVANIKNIEHVYGNSKTNNEIKGNNENNYLNGGGGYDEIWGYFGDDVL 1405
Query: 308 FYYAPSYLYKIYRFENAIIVY 328
+ S I E
Sbjct: 1406 TFEQGS----IDGGEGNDHYI 1422
Score = 45.2 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 28/235 (11%), Positives = 71/235 (30%), Gaps = 27/235 (11%)
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
+ ++ D+ + Y + I + + ++D G
Sbjct: 1207 REKINIKDSQYRYPEPSALKPINDYIDANEEDDNNPTVKKISSDETAITKGESTALFDLG 1266
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + + KN+ + + GG + ++ +T + + ++ ++ +
Sbjct: 1267 DGDDIAV-GYRARKNFFKITKGAKQYTGGNKPDIFYLSNTSLNT------DESMLLSK-- 1317
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL----SDVE 342
FDG +G DT + Y + + + L ++E
Sbjct: 1318 -----------FDGLAGEDTIVFDQVLLRDVRYFIDLTVGQIYSGSRNNKKLVANIKNIE 1366
Query: 343 RLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + + + + + L Y+++ G DV + EG D
Sbjct: 1367 HVYGNSKTNNEIKGNNENNYLNGGGGYDEIWGYFGDDVLTFEQG--SIDGGEGND 1419
>gi|298369366|ref|ZP_06980684.1| calcium-binding hemolysin protein [Neisseria sp. oral taxon 014
str. F0314]
gi|298283369|gb|EFI24856.1| calcium-binding hemolysin protein [Neisseria sp. oral taxon 014
str. F0314]
Length = 961
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 63/402 (15%), Positives = 102/402 (25%), Gaps = 67/402 (16%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G K+ + T+ I G N T+ + + ++G GND + G ++ + G D
Sbjct: 280 GTAKDDVINGTDGRDVIDGGVGNDTLNGYAGNDELIGGDGNDTLNGGDGHDKLWGDQGQD 339
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF-ADQCIDSVN 355
G G DT Y + I + ++VE L + I
Sbjct: 340 TMRGGVGNDT--YKVDDIGDTVIENPGEGIDSVNSSISYTLPANVENLELLGEANIYGAG 397
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDD- 410
++L A L G D+ + +G D + D +Y G+ +D
Sbjct: 398 NNADNLLVGNAGRNRLYSGRGNDIVDGGAGNDHINGGDGNDRLYGGKGDDIIYGGAGNDV 457
Query: 411 ---------LRNVFGSDRGAAARHYITHGVKEGRNPDAFK-------------------- 441
L G+D RN F
Sbjct: 458 LDGGTGKDRLYGGKGNDTYLFDGQTTVIDEASDRNTVRFDDKIDIGTLRLFTRAADGGGT 517
Query: 442 --------------------------ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ I F A GK + G
Sbjct: 518 DWIIASVRGEMTISRQFSDGLSNPVISRFEIGGKSYSAAEFQKAVSGGHYGKSLYGTSGN 577
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH---YITHGVKEGRNPDAFKALEYIAS 532
+ R D Y+ GS G H + + + L +
Sbjct: 578 DTLRGTADDDYIDGGSDGRDTLYGGDGDDLIVEHSALILGVPDDKLYGGNGNDRLYADSG 637
Query: 533 HEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLT 574
+ L + KD + FG G F+ L
Sbjct: 638 DDLLDGGAGNDYLEGGLHKDTYI-FGRGYGHDTIFDFMFDLD 678
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 58/401 (14%), Positives = 110/401 (27%), Gaps = 70/401 (17%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D + G + + +I G E N + +SV G G+D + G + +
Sbjct: 94 GNDGYNRLNGGRGNDTV-YGMGGEDNISGGEGNDKLYGGEGKDSVNGDEGDDRLYGGNGD 152
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS------- 339
++ GND+ G G DTF + A S I + V + + D +S
Sbjct: 153 DILNGGKGNDILQGDMGEDTFVFNADSGHDTIIDNQGNNTVRFGSGIRADKISIAQTTNV 212
Query: 340 -----------------------------DVERLRFADQCIDSVNVKQ------------ 358
V R +F + + +
Sbjct: 213 SGNTDWVIKINDETSLTIRNQYLKTETEPAVNRFQFGAETYTARELALLKEGLSRPTYEE 272
Query: 359 --RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
++ + TA + + G+DV + G D L G +D N
Sbjct: 273 PPKNKIMGTAKDDVINGTDGRDVIDGGVGNDTLNGYAGND-----ELIGGDGNDTLNGGD 327
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ G R + + +I + D V ++
Sbjct: 328 GHDKL----WGDQGQDTMRGGVGNDTYKVDDIGDTVIENPGEGIDSVNSSIS-YTLPANV 382
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
E + ++ +Y + + G+ Y G + ++ L
Sbjct: 383 ENLELLGEANIYGAGNNADNLLVGNAGRNRL--YSGRGNDIVDGGAGNDHINGGDGNDRL 440
Query: 537 INAFADAPDLVQAGKDHF-------SNFGYEEGRSITFNPD 570
D AG D +G + + F+
Sbjct: 441 YGGKGDDIIYGGAGNDVLDGGTGKDRLYGGKGNDTYLFDGQ 481
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 67/427 (15%), Positives = 116/427 (27%), Gaps = 80/427 (18%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ D G G T+ + ++ G G
Sbjct: 294 DVIDGGVGNDTLNGYAGNDELIGGDGNDTLNGGDGHDKLWGDQGQDTMRGGVGND----- 348
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
Y+ D +V+ +++S Y + +++ ++ + A GNN
Sbjct: 349 --TYKVDDIGDTVIENPGEGIDSVNSSISYT---LPANVENLELLGEANIYGAGNNA--- 400
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + +Y G+D++D G N I +
Sbjct: 401 DNLLVGNAGRNRLYSGRGNDIVD----------------------GGAGNDHINGGDGND 438
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G G+D++ G + N+V +G D G G DT+ + + + N + D
Sbjct: 439 RLYGGKGDDIIYGGAGNDVLDGGTGKDRLYGGKGNDTYLFDGQTTVIDEASDRNTVRFDD 498
Query: 330 ANEHKQ-------------------------------DFLSDVERLRFADQCIDSVNVKQ 358
+ D LS+ RF +
Sbjct: 499 KIDIGTLRLFTRAADGGGTDWIIASVRGEMTISRQFSDGLSNPVISRFEIGGKSYSAAEF 558
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEF-GLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ + + L G D G S+GRD Y G DDL +
Sbjct: 559 QKAVSGGHYGKSLYGTSGNDTLRGTADDDYIDGGSDGRDTL-----YGGDGDDLIVEHSA 613
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ G R Y S +DL++ A L FG
Sbjct: 614 LILGVPDDKLYGGNGNDR--------LYADSGDDLLDGGAGNDYLEGGLHKDTYIFGRGY 665
Query: 478 GRFVTFD 484
G FD
Sbjct: 666 GHDTIFD 672
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 42/309 (13%), Positives = 86/309 (27%), Gaps = 17/309 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + + D G G T L I A
Sbjct: 433 GGDGNDRLYGGKGDDIIYGGAGNDVLDGGTGKDRLYGGKGNDTYLFDGQTTVIDEA---- 488
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ + D T + + SD ++ I
Sbjct: 489 ----SDRNTVRFDDKIDIGTLRLFTRAADGGGTDWIIASVRGEMTISRQFSDGLSNPVIS 544
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + + + + +++Y + G+D L +YID ++ ++ G
Sbjct: 545 RFEIGGKSYSAAEFQKAVSGGHYGKSLYGTSGNDTL---RGTADDDYIDGGSDGRDTLYG 601
Query: 256 YEKNMTIAQ------HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ + I + + + G +GND + +S +++ +GND +G DT+ +
Sbjct: 602 GDGDDLIVEHSALILGVPDDKLYGGNGNDRLYADSGDDLLDGGAGNDYLEGGLHKDTYIF 661
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I+ F + + + L D I + + Y
Sbjct: 662 GRGYGHDTIFDFMFDLDDEYTPFIHTNTVKFTGGLTLDDLSISVTRGYGKEGIGYMPHLN 721
Query: 370 DLIQVIGQD 378
D + D
Sbjct: 722 DFVTTPRTD 730
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/343 (13%), Positives = 92/343 (26%), Gaps = 38/343 (11%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D+ + G + I+ + + + + ++ G+ N +GN+A+
Sbjct: 31 GTAADDVYYVTGSTDKINEAVNGGTDSVYSNVSYVLPNNVENLTLTGTQ-NIYGLGNNAD 89
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
N + G + +G G DT + I E +Y +D ++ E
Sbjct: 90 NTLTGNDGYNRLNGGRGNDTVY--GMGGEDNISGGEGNDKLYGG--EGKDSVNGDE---- 141
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF--ESMKHFYEFGLSEGRDI------- 397
IL + L +G+D F + ++G +
Sbjct: 142 --GDDRLYGGNGDDILNGGKGNDILQGDMGEDTFVFNADSGHDTIIDNQGNNTVRFGSGI 199
Query: 398 ------TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+ G+ D + + Y+ + N F A Y A
Sbjct: 200 RADKISIAQTTNVSGNTDWVIKINDETSLTIRNQYLKTETEPAVNRFQFGAETYTARELA 259
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
L+ P + K+ D + D+ + +
Sbjct: 260 LLKEGLSRPTYEEPPKNKIMGTAK--------DDVINGTDGRDVIDGGVGNDTLN----G 307
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
G E D L H+ L G D +
Sbjct: 308 YAGNDELIGGDGNDTLNGGDGHDKLWGDQGQDTMRGGVGNDTY 350
>gi|319638283|ref|ZP_07993046.1| hypothetical protein HMPREF0604_00670 [Neisseria mucosa C102]
gi|317400556|gb|EFV81214.1| hypothetical protein HMPREF0604_00670 [Neisseria mucosa C102]
Length = 811
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 70/194 (36%), Gaps = 8/194 (4%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+L G N I + S + + G + N I +++ G SG+DV+ G ++
Sbjct: 567 ASLHLGENNIITITDSSHALVSGGDGNDRIRGSLGNDTINGDSGDDVIFGYDGDDRLNGG 626
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFA---- 347
GND G +G DT + S ++ + +++ + F+
Sbjct: 627 IGNDSVHGGNGNDTL--WGESGDDRLSGGDGDDVLFGGQGIDYLVGGKGADTYVFSLGEG 684
Query: 348 -DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
D ID+V S DL + DV + SEG IT + G
Sbjct: 685 KDTIIDNVGEHNALQFGQNISVNDLHIDVATDVRGNTDWKITIKGSEGDSITINDQFISG 744
Query: 407 SYDDLRNVFGSDRG 420
D + + F D G
Sbjct: 745 KTDAVIDTFRFDEG 758
>gi|126735233|ref|ZP_01750979.1| calcium binding hemolysin protein, putative [Roseobacter sp. CCS2]
gi|126715788|gb|EBA12653.1| calcium binding hemolysin protein, putative [Roseobacter sp. CCS2]
Length = 3576
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 51/173 (29%), Gaps = 25/173 (14%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S +I G + TI + + G G+D + G ++ F G+DV +G +G D F
Sbjct: 3302 SHDNIYGLGGDDTIEGRAGNDHLYGGDGDDTLKGGDGDDSLFGGDGDDVLEGGNGDDLLF 3361
Query: 309 -------YYAPSYLYKIYRFENAIIVYDA------------------NEHKQDFLSDVER 343
Y E V + + + + +VE
Sbjct: 3362 GGAGDDLLTGSGYADSFDGGEGVDTVDFSYSSEDNVIDLSSGRIDWPSTGGFELIVNVEN 3421
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + V + LE + + G+D RD
Sbjct: 3422 IIGSSGANTIVGSADDNRLEGRGGVDAIFGGSGEDNLFGGSGDDVLSGGSDRD 3474
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 57/377 (15%), Positives = 89/377 (23%), Gaps = 92/377 (24%)
Query: 251 SSIGGYEKNMT----IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + G N T I V +++ G GNDV+ S ++ + ND G SG DT
Sbjct: 2670 TRLEGTNDNDTGIAEINGSRVRDNLYGLLGNDVLDAGSGDDWLYGGKDNDTLYGDSGNDT 2729
Query: 307 FFYYAPSYLY------------------------------------KIYRFENAIIVYDA 330
+ Y I I V D
Sbjct: 2730 YIYEEGDGNDLIIDTSATDAETDTLLLSDIASTGADLSKVSDDLIVTITATNETITVRDR 2789
Query: 331 NEHKQDF-LSDVERLRFADQC-----------------------------IDSVNVKQRS 360
+ Q VE +RF+D + +
Sbjct: 2790 FDVGQTGDGDGVEFVRFSDGVFVEVLGGALAEVITTGTEAANTLHGWGLEDTLIGLGGND 2849
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGL--SEGRDITFDSYLYLGSYDDLRNVFGSD 418
LE + LI G D+ + +G D D+ D L S
Sbjct: 2850 TLEGHGGDDLLIGGSGGDIMRGGAGNDTYEWLAGDGNDSIRDNESNTSEIDRLILTDISS 2909
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
R E + +E + D N ++G
Sbjct: 2910 DDVKLRRQEGSAHLEITILSTGEMIEIQNRYSDSNNGRGIEIIEF------------DDG 2957
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
T D +DL D A + A + L+
Sbjct: 2958 VVWTLDEIRGATVVEDLNESGLVDGTAYD--------DNIYGLTGNDTINGSAGDDTLVG 3009
Query: 539 AFADAPDLVQAGKDHFS 555
+ +G D +
Sbjct: 3010 GDGNDTLKGGSGNDTYV 3026
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 83/282 (29%), Gaps = 15/282 (5%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D+ D G TI + G +G ++G D D
Sbjct: 3289 TGDASANNLYGSISHDNIYGLGGDDTIEGRAGNDHLYGGDGDDTLKGGDGDDSLFGGDGD 3348
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ + + D ++ S + + V Y + + + +I+
Sbjct: 3349 DVLEGGNGDDLLFGGAGDDLLTGSGYADSFDGGEGVDTVDFSYSSEDNVIDLSSGRIDWP 3408
Query: 213 QKDS----PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
++ I S G + + + N ++ +I G + +
Sbjct: 3409 STGGFELIVNVENIIGSSGANTI---VGSADDNRLEGR-GGVDAIFGGSGEDNLFGGSGD 3464
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG---LDTFFYYAPSYLYKIYRFENAI 325
+ + G S D + G + ++ SGND G SG D F + I F++ +
Sbjct: 3465 DVLSGGSDRDHIWGGAGSDRIDSGSGNDTMRGDSGSNDADVFVFREEQGHDYITDFQDGL 3524
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + + + L D ++ + A
Sbjct: 3525 DMIEFEAVSFTY----DDLMIFDGTTGAIVQWAGDMTVTIAG 3562
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/218 (15%), Positives = 69/218 (31%), Gaps = 9/218 (4%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
++A +++ G ++ + G N++ G+DV G SG D + S Y R
Sbjct: 2521 SMAGTESSDTITGLGSDNTLRGYDGNDILKGGYGDDVLIGDSGNDHLEGGSGSDTYIWSR 2580
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ +E Q + +RL D V + +++ + + V G++
Sbjct: 2581 GHGNDTI---DEEGQSDRTQTDRLILTDVNSAEVELTRKNTFNDEHRNDLRLSVNGEEQI 2637
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
F G EG + + + +D+ + + G+ E
Sbjct: 2638 SVWDQFKTNG--EGLEYVEFADGVVWDREDILSRTRLEGTNDND----TGIAEINGSRVR 2691
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
L + ++ L D D +
Sbjct: 2692 DNLYGLLGNDVLDAGSGDDWLYGGKDNDTLYGDSGNDT 2729
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 72/263 (27%), Gaps = 31/263 (11%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
F E + + I++ T I D G ++ + +
Sbjct: 2811 FVEVLGGALAEVITTGTEAANTLHGWGLEDTLIGLGGNDTLEGHGGDDLLIGGSGGDIMR 2870
Query: 130 HALGLMH----PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
G G N + + LT + S + ++
Sbjct: 2871 GGAGNDTYEWLAGDGNDSIRDNESNTSEIDRLILTDISSDDVKLRRQEGSAHLEITILST 2930
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+++ +Q Y + I+ I G L I G DL
Sbjct: 2931 GEMIEIQNRY---------------SDSNNGRGIEIIEFDDGVVW-TLDEIRGATVVEDL 2974
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N + +++ G +GND + G++ ++ GND G SG D
Sbjct: 2975 NESGL-----------VDGTAYDDNIYGLTGNDTINGSAGDDTLVGGDGNDTLKGGSGND 3023
Query: 306 TFFYYAPSYLYKIYRFENAIIVY 328
T+ + I ++
Sbjct: 3024 TYVWSVGDDSDIILENKSDETDV 3046
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 85/269 (31%), Gaps = 14/269 (5%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
I + Q ++ D G + + + N + + G +
Sbjct: 2321 TIVETSEQITVKRQYESETDGYGLESIAFSDGVIWGLEDIFNHATETGTAG-SDTLFGDN 2379
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ G +G+D + + ++ +GND G +G DT+ +
Sbjct: 2380 GANNNHIYGLAGDDTIDAKAGDDTLVGGTGNDTLKGGAGDDTYV---------WSIGDGN 2430
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES-M 383
I+ + + D SDV+ L ++ +N +S +DLI + +
Sbjct: 2431 DIINELSNDGPDRDSDVDTLILKGISLNDIN--LQSWHYKNEVKDDLIIWTDDWSDDKFI 2488
Query: 384 KHFYEFG-LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ + +FG EG ++ + L D + + ++ R D
Sbjct: 2489 RVWDQFGASGEGIELLVLDDIVLNRQDIIDLTSMAGTESSDTITGLGSDNTLRGYDGNDI 2548
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFS 471
L+ + LI + G D +
Sbjct: 2549 LKGGYGDDVLIGDSGNDHLEGGSGSDTYI 2577
Score = 41.7 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 57/423 (13%), Positives = 110/423 (26%), Gaps = 51/423 (12%)
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+ + +D + + + S N + + P + S GDD + G
Sbjct: 2179 SLLSADAITNGQFIASLAQSTENQLDGYNHTATNLPTVTETTGSTGDDTIT----GVSGQ 2234
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
L ++ G E + TI T ++V G G+D+ + + GND + +
Sbjct: 2235 DKILGLAGDDTLWGKEGSDTIVGGTGDDTVGGYHGSDIYLWKKGD-------GNDSIEDN 2287
Query: 302 SGL----DTFFYYAPSYLYKIYRFENAIIVYD-------------ANEHKQDFLSDVERL 344
D + + + + +E +
Sbjct: 2288 GTSLIHMDRLVFEDVASDGVTLTNAPGSLNLVITIVETSEQITVKRQYESETDGYGLESI 2347
Query: 345 RFADQCI-----------DSVNVKQRSIL----------EYTASYEDLIQVIGQDVFESM 383
F+D I ++ ++ A + + G D
Sbjct: 2348 AFSDGVIWGLEDIFNHATETGTAGSDTLFGDNGANNNHIYGLAGDDTIDAKAGDDTLVGG 2407
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D S + + G DR + I G+
Sbjct: 2408 TGNDTLKGGAGDDTYVWSIGDGNDIINELSNDGPDRDSDVDTLILKGISLNDINLQSWHY 2467
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ + +I + D D F G V D L DL ++ G++
Sbjct: 2468 KNEVKDDLIIWTDDWSDDKFIRVWDQFGASGEGIELLVLDDIVLNRQDIIDLTSMAGTES 2527
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ R D L+ + LI + +G D +
Sbjct: 2528 SDTITGLGSD--NTLRGYDGNDILKGGYGDDVLIGDSGNDHLEGGSGSDTYIWSRGHGND 2585
Query: 564 SIT 566
+I
Sbjct: 2586 TID 2588
Score = 39.4 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 49/203 (24%), Gaps = 31/203 (15%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ + +E A + L G D + +G D+ G+ DD
Sbjct: 3304 DNIYGLGGDDTIEGRAGNDHLYGGDGDDTLKGGDGDDSLFGGDGDDVLEG-----GNGDD 3358
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L FG +G Y + + + G +
Sbjct: 3359 LL--FGGAGDDLLTGSGYADSFDGGEGVDTVDFSYSSEDNVIDLSSGRIDWPSTGGFELI 3416
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
N + N+ GS EGR A+
Sbjct: 3417 VN----------------------VENIIGSSGANTIVGSADDNRLEGR--GGVDAIFGG 3452
Query: 531 ASHEDLINAFADAPDLVQAGKDH 553
+ ++L D + +DH
Sbjct: 3453 SGEDNLFGGSGDDVLSGGSDRDH 3475
>gi|254360695|ref|ZP_04976844.1| leukotoxin [Mannheimia haemolytica PHL213]
gi|126356|sp|P16535|LKA1A_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|73621154|sp|Q7BHI8|LKA1B_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762018|gb|AAG40287.1|AF314503_1 leukotoxin [Mannheimia haemolytica]
gi|150494|gb|AAA25529.1| LktA protein [Mannheimia haemolytica]
gi|153091235|gb|EDN73240.1| leukotoxin [Mannheimia haemolytica PHL213]
Length = 953
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/331 (13%), Positives = 100/331 (30%), Gaps = 28/331 (8%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
AD L++ + T + F L P + R G++ + L
Sbjct: 507 ADKLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITKLNINRV 566
Query: 74 SI------HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F +N D+ + + + + G G + + E
Sbjct: 567 DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGTTE 626
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
I G G Y +D E + +V + + T +V +
Sbjct: 627 IDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VETGKALHEVTSTHTALVGN 684
Query: 188 IVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++ + + G Y + K ++ I + +D+ +
Sbjct: 685 REEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFN--------- 729
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + TI + + + G G+D++ G + ++ GND+ G G D
Sbjct: 730 ----DAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKGDDI 785
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
F + I + + ++ + +D
Sbjct: 786 FVHRKGDGNDIITDSDGNDKLSFSDSNLKDL 816
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 61/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I G+D V
Sbjct: 571 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-IAKLGEGDDNVF 619
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 620 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKALHEVTSTHT 679
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L VE + K +
Sbjct: 680 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVD 739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 740 TIDGNDGNDRLFGGKGDDILDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRKGD 792
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + D L + S+
Sbjct: 793 GNDIITDSDGNDKLSFSDSN 812
>gi|262274578|ref|ZP_06052389.1| RTX cytolytic toxin [Grimontia hollisae CIP 101886]
gi|262221141|gb|EEY72455.1| RTX cytolytic toxin [Grimontia hollisae CIP 101886]
Length = 588
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/403 (12%), Positives = 107/403 (26%), Gaps = 20/403 (4%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
I N + + +D G T+ + EI + PG+
Sbjct: 4 IFGTNTNNNLVGTNDDDDI-YGLLGSDTLLGYEGNDTLYGDTSPSEI----QTLTPGADG 58
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ F +++DAS + ++ D + A +
Sbjct: 59 RYAIQHDTFISVTLSQFNFPSPEAQSLGYAILDASGAVLSREIIVDYTNTAEHGSAIDIN 118
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ N + + S + G ++ + I E SS N
Sbjct: 119 VENGVSLVFFTLLSSELSGFDWRPFGLSGINTDIPASNVTII---VEEISSTADNHGNDN 175
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + + G G+D +IG N++ GND+ G +G D + +
Sbjct: 176 LYGYDGDDRLFGEGGDDYLIGGQGNDMLSGGEGNDILWGENGEDHL--HGGDGDDILQGQ 233
Query: 322 ENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + + L D ++ ++L G D+
Sbjct: 234 NGIDKLEGGAGNDSLYGGRGNDTLLAGDGTDYVRGQNGDDVIRGGTGDDELWGDNGDDII 293
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ G D+ F D++ G D +G
Sbjct: 294 RGDQGADYIEGGNGNDLLFGGAG----KDEILGGTGDDDIR-----GNNGDDTIYGEGGN 344
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
L A ++ + + +G + + +
Sbjct: 345 DTLRGNAGNDIIDGGEGNDWIFGNLGSNTLLGGNGNDYLLAGW 387
>gi|149185552|ref|ZP_01863868.1| hypothetical protein ED21_21044 [Erythrobacter sp. SD-21]
gi|148830772|gb|EDL49207.1| hypothetical protein ED21_21044 [Erythrobacter sp. SD-21]
Length = 244
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 65/201 (32%), Gaps = 14/201 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ +Y G+D+L GG E + G E + + I+
Sbjct: 35 NDRLNRDGGNDFLYGGTGNDIL----SGGWGTDFVSGEEGDDTATGGEGDDKLYGGDGID 90
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G +GND+V+G + + + GND G D +Y ++ +
Sbjct: 91 NLSGDNGNDLVLGFAGFDFLYGGLGNDRMFGGEDDD--VIDGEDGDDSVYGGDDNDELVG 148
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
A+ + L +A + + ++ L+ G D E +
Sbjct: 149 ADGIDWLYAGSGNDLVYAGEN--------DDTVYGGDGHDTLLGEEGNDRIEGGAGYDYI 200
Query: 390 GLSEGRDITFDSYLYLGSYDD 410
+G D+ F Y D
Sbjct: 201 IAGDGDDVIFGGNDSDYLYGD 221
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 51/203 (25%), Gaps = 10/203 (4%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++ G ND + + N+ + +GND+ G G D F E
Sbjct: 21 YGGADADTLYGQEDNDRLNRDGGNDFLYGGTGNDILSGGWGTD--FVSGEEGDDTATGGE 78
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+Y + ++ L + + L + + DV +
Sbjct: 79 GDDKLYGGD--------GIDNLSGDNGNDLVLGFAGFDFLYGGLGNDRMFGGEDDDVIDG 130
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ D + Y N Y G +
Sbjct: 131 EDGDDSVYGGDDNDELVGADGIDWLYAGSGNDLVYAGENDDTVYGGDGHDTLLGEEGNDR 190
Query: 443 LEYIASHEDLINAFADAPDLVQV 465
+E A ++ +I D
Sbjct: 191 IEGGAGYDYIIAGDGDDVIFGGN 213
>gi|73621160|sp|P0C084|LKA7A_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|73621168|sp|P0C083|LKTA6_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762020|gb|AAG40288.1|AF314504_1 leukotoxin [Mannheimia haemolytica]
gi|11762024|gb|AAG40290.1|AF314506_1 leukotoxin [Mannheimia haemolytica]
gi|11762026|gb|AAG40291.1|AF314507_1 leukotoxin [Mannheimia haemolytica]
Length = 953
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/331 (13%), Positives = 100/331 (30%), Gaps = 28/331 (8%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
AD L++ + T + F L P + R G++ + L
Sbjct: 507 ADKLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITKLNINRV 566
Query: 74 SI------HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F +N D+ + + + + G G + + E
Sbjct: 567 DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGTTE 626
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
I G G Y +D E + +V + + T +V +
Sbjct: 627 IDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VETGKALHEVTSTHTALVGN 684
Query: 188 IVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++ + + G Y + K ++ I + +D+ +
Sbjct: 685 REEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFN--------- 729
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + TI + + + G G+D++ G + ++ GND+ G G D
Sbjct: 730 ----DAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKGDDI 785
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
F + I + + ++ + +D
Sbjct: 786 FVHRKGDGNDIITDSDGNDKLSFSDSNLKDL 816
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 61/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I G+D V
Sbjct: 571 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-IAKLGEGDDNVF 619
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 620 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKALHEVTSTHT 679
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L VE + K +
Sbjct: 680 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVD 739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 740 TIDGNDGNDRLFGGKGDDILDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRKGD 792
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + D L + S+
Sbjct: 793 GNDIITDSDGNDKLSFSDSN 812
>gi|260575552|ref|ZP_05843550.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
gi|259022195|gb|EEW25493.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
Length = 2455
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 57/421 (13%), Positives = 103/421 (24%), Gaps = 31/421 (7%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH--EIGHALGLMHPGSYNG 142
+ Y T + D+ G G T+L +IG + G
Sbjct: 667 GSAYADTLTGSTGDDSLSGGTGGDILVGGAGNDTLLGEADADSFQIGTSQGTDSIVGGET 726
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS- 201
GY VD + + + ++ + + +
Sbjct: 727 GYDYDYVDFALATAGVTVTFSGNETGSYVAGTGTGSFSQIEQITGSAYADVLNASATTTG 786
Query: 202 ---------LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNT 247
Y G+D L+ TL GG + L
Sbjct: 787 ATLVGGGGDDTLTGGSGADMFNGGDGHDLEYGGLGNDTLNGDAGNDTLYGGAGDDWLLTG 846
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G + N I+ + ++G +GND ++G N+ G D G +G+D
Sbjct: 847 SENNMAFGGDGNDYISDMSGNSLLMGEAGNDTILGGDGNDTINGGLGADSLAGGTGIDLL 906
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y + + A D +S E + + + A
Sbjct: 907 DYSDAAAGVSVDLATGAT----GGAALGDTISGFEAVLGSAYADTLTGSTGADSILGGAG 962
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS----------YLYLGSYDDLRNVFGS 417
+ L G D +G D D+ D + N G+
Sbjct: 963 SDLLTGGAGNDTLIFGAGNDSVYGGDGADSIDDNIGGYDIGANLIDGGAGNDTIWNGGGN 1022
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D + +L A ++ + G D +
Sbjct: 1023 DTVYGGDGDDIIDDHNSGDIAGDSSLFGDAGNDTIWAGGGSDTLYGGTGNDALYGENGAD 1082
Query: 478 G 478
Sbjct: 1083 T 1083
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 61/449 (13%), Positives = 106/449 (23%), Gaps = 57/449 (12%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + + D G G T+ + G
Sbjct: 1367 STGAGNDVVTGGSGADSISGGDGNDSLVGGAGNDTVDGGTGNDTLDGGAGNDLLLGGAGT 1426
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD-----SMMDASFGYCATPMVSDIV 189
+G V + D S+ + P + G S+I
Sbjct: 1427 DSFALQDGFGNDTLVGGESVGDWDQLSLAALTAPVSITYTGADTGTLIGAGGAVTFSEIE 1486
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ GA IEV TI GDD ++ + G + +
Sbjct: 1487 SWVLTAGADSLDAALATTTIEVF--GGLGNDTITTGSGDDFINASTGAGTDANLIHSGAG 1544
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF- 308
I N TI + ++V G +G+ V G++ N+ +GNDV DG G D+ +
Sbjct: 1545 NDYIATSAGNDTIYAGSGNDTVAGGAGDSTVYGDAGNDFIAGYAGNDVIDGGDGNDSLYG 1604
Query: 309 ------YYAPSYLYKIYRFENAIIVYDANEHKQDF------------------------- 337
+ I + ++ D
Sbjct: 1605 GDGNDVLTGGAGSDVISAGAGSDLINVNAAAGVDSIDGGADWDQLVFLGDIGGPGVSVSF 1664
Query: 338 ----------------LSDVERLRFADQCI--DSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ E D+ + A + + IG D
Sbjct: 1665 TGATANYSYAGGGSGNATGFENYTLTANADVFDASGASGAVTVAGGAGNDSITGSIGADY 1724
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ +G DI + + Y G +
Sbjct: 1725 LAAGDGNDTVSGGDGADILNGDAGNDLLFGGAGDDMVLLGVGNDTGYGGDGNDLINSNGG 1784
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKD 468
L A ++ L D G D
Sbjct: 1785 ASLLYGGAGNDTLQGGAGDDTMYGGTGAD 1813
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 59/472 (12%), Positives = 118/472 (25%), Gaps = 34/472 (7%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
++++G + I + D G+G I E G
Sbjct: 193 ITAASSGAGVDIYGEGGNDTLIGSNYTDWIEGGLGNDLITGGAGYDEFVGGAGNDTIDGG 252
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G + + + + G T
Sbjct: 253 ADGDIFWIDQTSGTDSLIGGETGTGNDTLSLADPSLGGVNVTFSA--------------N 298
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G+ Y I+T++ S G D ++ + + + N
Sbjct: 299 EAGSYAYNGGGASGSFSQIETLWLSDGADSVNASATTVGQ-----------YLDAVAGND 347
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T+ + ++++G +GND ++G + N+ + +GND G +G D+ A + + I
Sbjct: 348 TLTGGSGADTLLGGTGNDSLVGGAGNDTIYGGAGNDTLAGGTGNDSLLGEADADSFAIGT 407
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + +D + L F + + + +V
Sbjct: 408 SQGTDTIV-----GGETGTDTDTLNFGTAVGGVSVTFSANETGSYTAGTSIGSFSQIEVI 462
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ T + LY G+ +D GS + G D
Sbjct: 463 SGSAYADTLNAG---STTGGAILYGGAGNDTLTG-GSGGDVLDGGTGNDSIIGGTASDTI 518
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
+ S + G G + +
Sbjct: 519 RGGAGSDSLAGGLGTDLLDYSDATAAVSVDLATGITGGAALGDSISGFEAVLGSAYADTL 578
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ A R G L+ ++ L L AG D
Sbjct: 579 TGSTGADRLTGGDGNDSLVGGAGNDTLDGGLGNDTLRGGAGSDSLLGGAGTD 630
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 65/512 (12%), Positives = 117/512 (22%), Gaps = 52/512 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
D DV G G I + I G
Sbjct: 1586 GYAGNDVIDGGDGNDSLYGGDGNDVLTGGAGSDVISAGAGSDLINVNAAAGVDSIDGGAD 1645
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
V ++ + S G + A ++ A S
Sbjct: 1646 WDQLVFLGDIGGPGVSVSFTGATANYSYAGGGSGNATGFENYTLTANADVFDASGASGAV 1705
Query: 205 NIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ S + G+D + GG I + G + +
Sbjct: 1706 TVAGGAGNDSITGSIGADYLAAGDGNDTV----SGGDGADILNGDAGNDLLFGGAGDDMV 1761
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++ G GND++ N ++ + +GND G +G DT + + L++
Sbjct: 1762 LLGVGNDTGYGGDGNDLINSNGGASLLYGGAGNDTLQGGAGDDTMYGGTGADLFQSSMDN 1821
Query: 323 NAIIVYDANEHKQD----------------------------------------FLSDVE 342
+ I++ + + S+VE
Sbjct: 1822 DTIVIENGFGNDTIDAGWSGTDFDTVDLSAVTAPLTVTLSGTGAGSITDGTDTISFSNVE 1881
Query: 343 RLRFADQCIDSVNVK--QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
L +++ + + G D G D+
Sbjct: 1882 HLILGSGADVVYGGADAGGLVIDGLGGGDTITGGSGADSISGGDGNDSVSSGSGNDVLTG 1941
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+ D L G+D V +G D E + L
Sbjct: 1942 GDGF----DTLAGGAGNDLIDGGADGDVLLVGQGGGVDTITGGETGFDQDQLQFGGTTEG 1997
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
V ++ G +F L D + G+ + G
Sbjct: 1998 VNVTFTGTEAGSYSYASGGSGSFTGIEQLNGTDLADTINGAAATGPLTFFGMDGNDLISG 2057
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L A ++ L + AG D
Sbjct: 2058 GAGGDLLSGDAGNDTLAGGAGEDFADGGAGND 2089
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 50/425 (11%), Positives = 92/425 (21%), Gaps = 35/425 (8%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG-- 133
+ + D AD+ G + + +G
Sbjct: 1709 GGAGNDSITGSIGADYLAAGDGNDTVSGGDGADILNGDAGNDLLFGGAGDDMVLLGVGND 1768
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ G N G + + ++ + M +D + ++
Sbjct: 1769 TGYGGDGNDLINSNGGASLLYGGAGNDTLQGGAGDDTMYGGTGADLFQSSMDNDTIVIEN 1828
Query: 194 IYGAPKGSLGNNIYKIEV---QQKDSPFIQTIYDSG------GDDLLDLTL------IGG 238
+G G + + +P T+ +G G D + + G
Sbjct: 1829 GFGNDTIDAGWSGTDFDTVDLSAVTAPLTVTLSGTGAGSITDGTDTISFSNVEHLILGSG 1888
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
I G TI + +S+ G GND V S N+V G D
Sbjct: 1889 ADVVYGGADAGGLVIDGLGGGDTITGGSGADSISGGDGNDSVSSGSGNDVLTGGDGFDTL 1948
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD---------------FLSDVER 343
G +G D + + E D + E
Sbjct: 1949 AGGAGND-LIDGGADGDVLLVGQGGGVDTITGGETGFDQDQLQFGGTTEGVNVTFTGTEA 2007
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE--SMKHFYEFGLSEGRDITFDS 401
++ S + L T + + M G D+
Sbjct: 2008 GSYSYASGGSGSFTGIEQLNGTDLADTINGAAATGPLTFFGMDGNDLISGGAGGDLLSGD 2067
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
F G + L + L+ +
Sbjct: 2068 AGNDTLAGGAGEDFADGGAGNDLLSGNDGFDTLSGGEGDDTLLGGTGDDVLLGDLGNDSL 2127
Query: 462 LVQVG 466
G
Sbjct: 2128 QGDAG 2132
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/381 (12%), Positives = 92/381 (24%), Gaps = 37/381 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
TI G+D + GG + +S+ N T+
Sbjct: 26 GGADSLSGLAGNDTIDAGTGNDTV-TGGDGGDYVLLGDGNDSFGDWNTEAGNDTVYGGLG 84
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------------------- 308
+S++G + ND++ G++ ++ +G D G +G D
Sbjct: 85 DDSIIGGADNDLLYGDAGSDTLSGGAGTDNVIGGAGNDYIMVSDDHDFDAIDGGTEFDTI 144
Query: 309 ----YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-----------QCIDS 353
Y +Y + + +++E + D +D
Sbjct: 145 WFGNYLTTQGVYVSFAGTGSGSYDFYGTTGNGSFNNIEAVGGTDYGDSITAASSGAGVDI 204
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
L + + + +G D+ + EF G D + D +
Sbjct: 205 YGEGGNDTLIGSNYTDWIEGGLGNDLITGGAGYDEFVGGAGNDTIDGGADGDIFWIDQTS 264
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
S G + A + + +
Sbjct: 265 GTDSLIGGETGTGNDTLSLADPSLGGVNVTFSANEAGSYAYNGGGASGSFSQIETLWLSD 324
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
G + YL + + G G + A +
Sbjct: 325 GADSVNASATTVGQYLDAVAGNDTLTGGSGADTL--LGGTGNDSLVGGAGNDTIYGGAGN 382
Query: 534 EDLINAFADAPDLVQAGKDHF 554
+ L + L +A D F
Sbjct: 383 DTLAGGTGNDSLLGEADADSF 403
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 59/473 (12%), Positives = 111/473 (23%), Gaps = 27/473 (5%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
S V + + D G G + LG
Sbjct: 769 ITGSAYADVLNASATTTGATLVGGGGDDTLTGGSGADMFNGGDGHDLEYGGLGNDTLNGD 828
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G +YG D + + M++ D ++ I G
Sbjct: 829 AGNDTLYGGAGDDWLLTGSENNMAFGGD---GNDYISDMSGNSLLMGEAGNDTILGGDGN 885
Query: 201 SLGNNIYKIEVQQKDSPF-IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
N + + + D+ +DL + + ++ G
Sbjct: 886 DTINGGLGADSLAGGTGIDLLDYSDAAAGVSVDLATGATGGAALGDTISGFEAVLGSAYA 945
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T+ T +S++G +G+D++ G + N+ +GND G G D+ Y
Sbjct: 946 DTLTGSTGADSILGGAGSDLLTGGAGNDTLIFGAGNDSVYGGDGADSIDDNIGGYDIGAN 1005
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + +S ++ S L A + + G D
Sbjct: 1006 LIDGGAGNDTIWNGGGNDTVYGGDGDDIIDDHNSGDIAGDSSLFGDAGNDTIWAGGGSDT 1065
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
G +D + + G A
Sbjct: 1066 LYGGTGNDALYGENG----------------------ADTFVVQDGWGQDTIGGGSVDAA 1103
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
L+ A L F D + F E + + + D
Sbjct: 1104 IDTLDMSAVTVPLTVTFTDVNYGTITDGTNNITFLNVERIITGTGADS-VNATLDTDGGI 1162
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G D + A ++ + + AG D
Sbjct: 1163 LETGAGNDTVTGSSGADTILAGDGNDVVTGGAGNDSIDAGAGADSVIGGAGAD 1215
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/441 (12%), Positives = 98/441 (22%), Gaps = 44/441 (9%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + + + + I AD G G T+ + G
Sbjct: 1183 AGDGNDVVTGGAGNDSIDAGAGADSVIGGAGADSIALGDGNDTLSMTASDGLADTIDGGS 1242
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
S N G G D Y T Y + + + ++
Sbjct: 1243 GNDSINLGTGGSGNDVVYGGVGNDTLTTQYDLGGGNDTLYGGDGRDVFVAGAGDSIVGGE 1302
Query: 196 GAPK---------------GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
G GN F + +G +
Sbjct: 1303 GGDDFDTIDLSTIPAAASITLTGNGTGTASSGGYTLAFTEVEAITGTALADTINGAADSW 1362
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ G +I+ +S+VG +GND V G + N+ +GND+ G
Sbjct: 1363 GMTYSTGAGNDVVTGGSGADSISGGDGNDSLVGGAGNDTVDGGTGNDTLDGGAGNDLLLG 1422
Query: 301 SSGLDTFFYYAPSYLYKIYR----------------------FENAIIVYDANEHKQDFL 338
+G D+F + + A
Sbjct: 1423 GAGTDSFALQDGFGNDTLVGGESVGDWDQLSLAALTAPVSITYTGADTGTLIGAGGAVTF 1482
Query: 339 SDVERLRFADQCIDSVNVKQRSILE--YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
S++E + +E + + G D +
Sbjct: 1483 SEIESWVLTAGADSLDAALATTTIEVFGGLGNDTITTGSGDDFINASTGAGTDANLIHSG 1542
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
D D + G+D A G + A ++ +
Sbjct: 1543 AGNDYIATSAGNDTIYAGSGNDTVA-----GGAGDSTVYGDAGNDFIAGYAGNDVIDGGD 1597
Query: 457 ADAPDLVQVGKDHFSNFGCEE 477
+ G D + +
Sbjct: 1598 GNDSLYGGDGNDVLTGGAGSD 1618
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/400 (12%), Positives = 82/400 (20%), Gaps = 8/400 (2%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G ND A D+ AV
Sbjct: 1059 AGGGSDTLYGGTGNDALYGENGADTFVVQDGWGQDTIGGGSVDAAIDTLDMSAVTVPLTV 1118
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ ++ I G D ++ TL I ++ G
Sbjct: 1119 TFTDVNYGTITDGTNNITFLNVERIITGTGADSVNATLDTDGG--ILETGAGNDTVTGSS 1176
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
TI + V G +GND + + + +G D G DT A L
Sbjct: 1177 GADTILAGDGNDVVTGGAGNDSIDAGAGADSVIGGAGADSIALGDGNDTLSMTASDGLAD 1236
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + + L + + G
Sbjct: 1237 TIDGGSGNDSINLGTGGSGNDVVYGGVGNDTLTTQYDLGGGNDTLYGGDGRDVFVAGAGD 1296
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
+ + S G+ + G IT
Sbjct: 1297 SIVGGEGGDDFDTIDLSTIPAAASITLTGNGTGTASSGGYTLAFTEVEAITGTALADTIN 1356
Query: 438 DAFKAL----EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGS 491
A + A ++ + G D + D+
Sbjct: 1357 GAADSWGMTYSTGAGNDVVTGGSGADSISGGDGNDSLVGGAGNDTVDGGTGNDTLDGGAG 1416
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
D L G+D A + + G + + L A
Sbjct: 1417 NDLLLGGAGTDSFALQDGFGNDTLVGGESVGDWDQLSLAA 1456
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 71/530 (13%), Positives = 122/530 (23%), Gaps = 75/530 (14%)
Query: 91 TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD 150
T + AD G ++ I G +GG V D
Sbjct: 3 TISGTTGNDTLTGTTGADSILGLGGADSLSGLAGNDTIDAGTGNDTVTGGDGGDYVLLGD 62
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
+ + T + + D+ G ++ + G +
Sbjct: 63 GNDSFGDWNTEAGNDTVYGGLGDDSIIGGADNDLLYGDAGSDTLSGGAGTDNVIGGAGND 122
Query: 211 VQQKDSPFIQTIYDSGGD-DLLDLTLIGGVK----------------------------- 240
D G + D + +
Sbjct: 123 YIMVSDDHDFDAIDGGTEFDTIWFGNYLTTQGVYVSFAGTGSGSYDFYGTTGNGSFNNIE 182
Query: 241 ---------NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ ++ + I G N T+ + + G GND++ G + + F
Sbjct: 183 AVGGTDYGDSITAASSGAGVDIYGEGGNDTLIGSNYTDWIEGGLGNDLITGGAGYDEFVG 242
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI-------------------------I 326
+GND DG + D F+ S + E
Sbjct: 243 GAGNDTIDGGADGDIFWIDQTSGTDSLIGGETGTGNDTLSLADPSLGGVNVTFSANEAGS 302
Query: 327 VYDANEHKQDFLSDVERLRFADQ--CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
S +E L +D +++ L+ A + L G D
Sbjct: 303 YAYNGGGASGSFSQIETLWLSDGADSVNASATTVGQYLDAVAGNDTLTGGSGADTLLGGT 362
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA--AARHYITHGVKEGRNPDAFKA 442
G D + D L G+D A G +G +
Sbjct: 363 GNDSLVGGAGNDTIYGGAG----NDTLAGGTGNDSLLGEADADSFAIGTSQGTDTIVGGE 418
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ A + G G F + +Y D N +
Sbjct: 419 TGTDTDTLNFGTAVGGVSVTFSANETGSYTAGTSIGSFSQIEVIS-GSAYADTLNAGSTT 477
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
GA Y G L+ ++ +I A AG D
Sbjct: 478 GGAIL--YGGAGNDTLTGGSGGDVLDGGTGNDSIIGGTASDTIRGGAGSD 525
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 67/281 (23%), Gaps = 26/281 (9%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ + + DV G G T+ I
Sbjct: 1911 TITGGSGADSISGGDGNDSVSSGSGNDVLTGGDGFDTLAGGAGNDLIDGGADGDVLLVGQ 1970
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
GG + D + + + + I
Sbjct: 1971 GGGVDTITGGETGFDQDQLQFGGTTEGVNVTFTGTEAGSYSYASGGSGSFTGIEQLNGTD 2030
Query: 202 LGNNI----YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
L + I + I G DLL G N G
Sbjct: 2031 LADTINGAAATGPLTFFGMDGNDLISGGAGGDLL----SGDAGNDTLAGGAGEDFADGGA 2086
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND------------------VFD 299
N ++ + +++ G G+D ++G + ++V GND
Sbjct: 2087 GNDLLSGNDGFDTLSGGEGDDTLLGGTGDDVLLGDLGNDSLQGDAGNDLLDSGDGDDTVT 2146
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G G DT + + L + +V D + D ++
Sbjct: 2147 GGVGDDTLGTGSGADLLVLTTDGGTDLVTDFDITLVDGFTN 2187
>gi|260787545|ref|XP_002588813.1| hypothetical protein BRAFLDRAFT_89756 [Branchiostoma floridae]
gi|229273983|gb|EEN44824.1| hypothetical protein BRAFLDRAFT_89756 [Branchiostoma floridae]
Length = 393
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 64/187 (34%), Gaps = 43/187 (22%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIK-- 80
W + Y+ + + +AR A W + LTF +DI+
Sbjct: 132 WQKRDLTYRIAQYPGENHLLH----SEVDEAIAR-AFQIWEEATLLTFTAIDTKADIEIK 186
Query: 81 -----------FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
F S + +++FD A++W GT L ALHE G
Sbjct: 187 FARGDHGDDTPFDGSGHTLAHAFSPGDGIHGDVHFDDAELWTVDSPMGTNLFMVALHEFG 246
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
H+LGL H + + SVM + P +S+ D++
Sbjct: 247 HSLGLNHSDNTD-------------------SVMYPWYP--GYPGSSYKLP----TVDVM 281
Query: 190 AVQKIYG 196
A+Q +YG
Sbjct: 282 AIQALYG 288
>gi|157818219|ref|NP_001099638.1| matrix metallopeptidase 15 [Rattus norvegicus]
gi|149032397|gb|EDL87288.1| rCG39153 [Rattus norvegicus]
Length = 657
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 54/164 (32%), Gaps = 31/164 (18%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
+ L + WSNY + + T ++ E R A W +V L F+E
Sbjct: 128 YTLTGKTWSNYHLTFSIQNYTEKLGWYNS-------MEAVRRAFQVWEQVTPLVFQEVPY 180
Query: 76 H---------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWR 111
+DI + ++ + P + D+ +
Sbjct: 181 DDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLAHAYFPGPGLGGDTHFDADEPWTFS 240
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + D +N
Sbjct: 241 STDLHGISLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTDN 284
>gi|99078019|ref|YP_611277.1| hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
gi|99035157|gb|ABF62015.1| Hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
Length = 1043
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/309 (13%), Positives = 79/309 (25%), Gaps = 29/309 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ T+Y +D LD ++ G + I + G N TI
Sbjct: 470 GNDTLEGGDGNDTLYAGVDNDSLDGGLGNDSMFGEAGSDIMFGGGGMDYMEGGIGNDTID 529
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++++G G+D++ G + N+ +GND G G DT +
Sbjct: 530 GGDDDDTILGGDGDDLIYGGAGNDSLTTGAGNDTLFGGEGDDTLR--NSVGDDSLSGGTG 587
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ D + + LI G D+
Sbjct: 588 NDSIVA-----------------TDGNDTLDGGSGNDTMYGGNDNDLLIGGTGADLMYGE 630
Query: 384 KHFYEFGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
F + + G D + + +G + F
Sbjct: 631 ADADTFRIEDNFGNDTIVGGEAGNDQDVVDLSYMTGPVTVTYTGPEAGTITDGTDTIQFS 690
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
+E + + A G + + D G+ DDL ++ S
Sbjct: 691 EIEELILTDQDDVVDARNDTAGVQINAGS---GNDSLTGGSGDDVFTGGAGDDLISLTAS 747
Query: 502 DRGAAARHY 510
+
Sbjct: 748 GGVDQITDF 756
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 64/380 (16%), Positives = 108/380 (28%), Gaps = 60/380 (15%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND- 152
+ + I D G G I + LG G ++ D
Sbjct: 395 GGTGSDVLIGGLGGDTISGGDGDDLIDGGEGDDFLSTGLGNDTLLGGEGNDTLHNSAGDD 454
Query: 153 -----------------------YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
ND+ V + + D+ FG + ++
Sbjct: 455 SLVGGVGDDSIVATEGNDTLEGGDGNDTLYAGVDNDSLDGGLGNDSMFGEAGSDIMFGGG 514
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYID 244
+ + G G+ + + IY G+D L TL GG +
Sbjct: 515 GMDYMEGGI-GNDTIDGGDDDDTILGGDGDDLIYGGAGNDSLTTGAGNDTLFGGEGDDTL 573
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
N+ S+ G N +I +++ G SGND + G + N++ +G D+ G +
Sbjct: 574 RNSVGDDSLSGGTGNDSIVATDGNDTLDGGSGNDTMYGGNDNDLLIGGTGADLMYGEADA 633
Query: 305 DTFFYYAPSYLYKIYRFENA---------------IIVYDANEHKQDF-------LSDVE 342
DTF I E + Y E S++E
Sbjct: 634 DTFRIEDNFGNDTIVGGEAGNDQDVVDLSYMTGPVTVTYTGPEAGTITDGTDTIQFSEIE 693
Query: 343 RLRFADQCIDSVNVKQRS--ILEYTASYEDLIQVIGQDVFESMKH------FYEFGLSEG 394
L DQ + + + + L G DVF G+ +
Sbjct: 694 ELILTDQDDVVDARNDTAGVQINAGSGNDSLTGGSGDDVFTGGAGDDLISLTASGGVDQI 753
Query: 395 RDITFDSYLYLGSYDDLRNV 414
D + G Y+D +V
Sbjct: 754 TDFDINDTDVDGFYNDQLDV 773
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/418 (12%), Positives = 106/418 (25%), Gaps = 23/418 (5%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
ND + + + V + + D + V++ + G
Sbjct: 242 GEPVNINSTATFNDLDQNYYNYDVEAVSLDTDEYTAFGTSDGTSLNVTNQDGSVRAAGTE 301
Query: 199 KGSLGNNIYKIEVQQKDSPFI-QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + + + FI T+ L+ + ++ G
Sbjct: 302 ANNPDDQDAWFSAEFEGRDFITFTLEARSTISGFTLSGDLIEDGVYVPIEQGNDTLLGGL 361
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ I +S+ G G+D + G ++V F +G+DV G G DT
Sbjct: 362 GSDVIMGQGGNDSLDGGDGDDSIDGGEGDDVMFGGTGSDVLIGGLGGDTI----SGGDGD 417
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + D L E L +A + L+ +G
Sbjct: 418 DLIDGGEGDDFLSTGLGNDTLLGGE---------------GNDTLHNSAGDDSLVGGVGD 462
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D + + +G D + L N + + G+
Sbjct: 463 DSIVATEGNDTLEGGDGNDTLYAGVDNDSLDGGLGNDSMFGEAGSDIMFGGGGMDYMEGG 522
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
++ + ++ D G D + + F S D
Sbjct: 523 IGNDTIDGGDDDDTILGGDGDDLIYGGAGNDSLTTGAGNDTLFGGEGDDTLRNSVGDDSL 582
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G+ + T G + ++ LI +A D F
Sbjct: 583 SGGTGNDSIVA---TDGNDTLDGGSGNDTMYGGNDNDLLIGGTGADLMYGEADADTFR 637
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/308 (14%), Positives = 84/308 (27%), Gaps = 48/308 (15%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + + T D G + + + +
Sbjct: 466 VATEGNDTLEGGDG--NDTLYAGVDNDSLDGGLGNDSMFGEAGSDIMFGGGGMDYMEGGI 523
Query: 133 G---------------------LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
G + + G D + + T S S
Sbjct: 524 GNDTIDGGDDDDTILGGDGDDLIYGGAGNDSLTTGAGNDTLFGGEGDDTLRNSVGDDSLS 583
Query: 172 MMDASFGYCATPM---VSDIVAVQKIYGAPKGSL--GNNIYKIEVQQKDSPFIQTIYDSG 226
+ AT + +YG L G + + D+ I D+
Sbjct: 584 GGTGNDSIVATDGNDTLDGGSGNDTMYGGNDNDLLIGGTGADLMYGEADAD-TFRIEDNF 642
Query: 227 GDDLLDLTLIGGVKNYIDL----NTESWSSIGGYEKNMTIAQHTV----IESVVGSSGND 278
G+D + G ++ +DL + + G +T T+ IE ++ + +D
Sbjct: 643 GNDTIVGGEAGNDQDVVDLSYMTGPVTVTYTGPEAGTITDGTDTIQFSEIEELILTDQDD 702
Query: 279 V-----------VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
V + S N+ SG+DVF G +G D A + +I F+
Sbjct: 703 VVDARNDTAGVQINAGSGNDSLTGGSGDDVFTGGAGDDLISLTASGGVDQITDFDINDTD 762
Query: 328 YDANEHKQ 335
D + Q
Sbjct: 763 VDGFYNDQ 770
>gi|329848647|ref|ZP_08263675.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843710|gb|EGF93279.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 715
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/307 (14%), Positives = 87/307 (28%), Gaps = 27/307 (8%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN+ Y ++ + + +L G V + L + + G + I
Sbjct: 360 GNDTYYLDDTGDRVTETAGQGNDLVRSTVTWSLAGQVIEDLILTEGASVNGTGNSLSNHI 419
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
++ + G G+DV+ G N+ +G+D+ G G DT +
Sbjct: 420 TGNSGNNILYGMGGDDVLSGMDGNDSLTGGAGHDILSGDGGDDTL--AGGDGNDQYNINT 477
Query: 323 NAIIVYDANEHKQDFLSD----------VERLRFAD-QCIDSVNVKQRSILEYTASYEDL 371
A +V + D +S +E L +++ + L + L
Sbjct: 478 VADLVLENAGQGTDTVSSSITYSLSGKQIENLILTGSGALNATGNNLANALTGNSGANLL 537
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+ G D G D + +G G+D A+ +
Sbjct: 538 SGLAGHDHLNGGSGADTLIGGTGNDTF--TVDNIGDLVTEVAGGGADLVQASASFTLDAY 595
Query: 432 KE-----------GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS-NFGCEEGR 479
E G + + L + G D F G + R
Sbjct: 596 VENLILTGTKTIHGTGNGHGNDMTGNGRNNTLNGLGGNDSLTGGQGGDVFLFQTGSGDDR 655
Query: 480 FVTFDSY 486
+ F +
Sbjct: 656 ILDFSAA 662
Score = 58.3 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 41/304 (13%), Positives = 77/304 (25%), Gaps = 47/304 (15%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G T+ +S+ G G+D++ G ++ +G D G G DT++
Sbjct: 309 RLTGSAYGDTLYGLAGNDSLNGGVGDDLITGGGGHDRMTGDAGADTLAGGIGNDTYYLDD 368
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ +V + + ++ + + + L
Sbjct: 369 TGDRVTETAGQGNDLVRSTVTWSLAGQVIEDLILTEGASVNGTGNSLSNHITGNSGNNIL 428
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+ G DV M G DI G
Sbjct: 429 YGMGGDDVLSGMDGNDSLTGGAGHDILSGD----------------------------GG 460
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+ I + DL+ A +S G + + S +
Sbjct: 461 DDTLAGGDGNDQYNINTVADLVLENAGQGTDTVSSSITYSLSGKQIENLILTGSGALNAT 520
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
++L N + GA L +A H+ L + G
Sbjct: 521 GNNLANALTGNSGANL-------------------LSGLAGHDHLNGGSGADTLIGGTGN 561
Query: 552 DHFS 555
D F+
Sbjct: 562 DTFT 565
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 46/304 (15%), Positives = 81/304 (26%), Gaps = 13/304 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ N +S + DV G ++ H+I G
Sbjct: 403 TEGASVNGTGNSLSNHITGNSGNNILYGMGGDDVLSGMDGNDSLTGGAG-HDILSGDGGD 461
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ--- 192
+ G Y ++ + + + S +++ A+
Sbjct: 462 DTLAGGDGNDQYNINTVADLVLENAGQGTDTVSSSITYSLSGKQIENLILTGSGALNATG 521
Query: 193 -KIYGAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI----- 243
+ A G+ G N+ T+ G+D + IG + +
Sbjct: 522 NNLANALTGNSGANLLSGLAGHDHLNGGSGADTLIGGTGNDTFTVDNIGDLVTEVAGGGA 581
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL S S I T G+ + + GN NN GND G G
Sbjct: 582 DLVQASASFTLDAYVENLILTGTKTIHGTGNGHGNDMTGNGRNNTLNGLGGNDSLTGGQG 641
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D F + S +I F A ++D + + +I
Sbjct: 642 GDVFLFQTGSGDDRILDFSAAQNDTINVNAYTGGVADNSLVAQVGGNVVITFDASNTITV 701
Query: 364 YTAS 367
A+
Sbjct: 702 IGAT 705
>gi|296534518|ref|ZP_06896938.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296265155|gb|EFH11360.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 1158
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/244 (18%), Positives = 77/244 (31%), Gaps = 21/244 (8%)
Query: 203 GNNIYKIEVQ---------QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
GN+ Y + Q I D D +++ + G S + I
Sbjct: 855 GNDTYSVNDPRDIVVEHIHQGFDTVRSWIEDYALPDWVEVLELWGHVARNGTGNASHNRI 914
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF------ 307
G + +A + + G +G+D + G ++ SG+DV DG +G D
Sbjct: 915 TGNALDNRLAGGAGNDMLYGMAGDDWLEGGEGDDWLIGGSGHDVLDGGAGFDRMHGGPGN 974
Query: 308 -FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYT 365
Y+ +I FE + VE L + + + + +
Sbjct: 975 DIYWLRDPRDRILEFEGNGYDTVFAFVDTQLPAHVEALVLLGEAPLKGTGNRLDNRIIGH 1034
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ L + G DV + EG D D+L G+DR RH
Sbjct: 1035 DAGSRLWGMGGDDVLIGGAGQDQLRGGEGDDWL----EGGAGDDELAGGAGADRFVFGRH 1090
Query: 426 YITH 429
+
Sbjct: 1091 FGQD 1094
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/238 (18%), Positives = 71/238 (29%), Gaps = 59/238 (24%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG------ 273
Q + D G+D ++ + IDL+ + S I G + IA+ TVIE +G
Sbjct: 462 QVLRDEAGEDRINAAAVS-GPVRIDLSGATESRIAGQR--LVIAEGTVIEHALGGDGDDW 518
Query: 274 ------------------------------SSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+G+D++IG++ ++V G D G +G
Sbjct: 519 LGGNAADNHLIGNRGSDTLRGLEGNDILEGGAGDDLLIGDAGDDVLEGGPGADRMLGGAG 578
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF----------------- 346
D + P + E + VERL
Sbjct: 579 DDLYRVDDPR--DAVIEQEGEGYDTVRASIDYALPAHVERLELLPGARIGAGNALGNVII 636
Query: 347 -ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
D + + + +L A + L GQD E G D+
Sbjct: 637 GHDGGVRLLGLAGDDVLRGGAGDDVLEGGEGQDRLEGGAGDDRLLGGAGNDLLLGGEG 694
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 65/227 (28%), Gaps = 13/227 (5%)
Query: 202 LGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+++ + + + + GDD L +GG N + L E + G
Sbjct: 648 AGDDVLRGGAGDDVLEGGEGQDRLEGGAGDDRL----LGGAGNDLLLGGEGRDWLEGGGG 703
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + G G+D+++G + G D +G +G D Y+ ++
Sbjct: 704 GDRLEGGAGDDHLFGQEGDDILLGGGGRDRLNGGGGADWMEGGAGDD--VYWVDHPGDRV 761
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
VE L ++++ A L G D
Sbjct: 762 VERAGEGHDRVVASIDYTLPEHVEELLLEGLARRGTGNALGNLIDGNALDNWLQGGAGDD 821
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
E G D D + FG+D +
Sbjct: 822 WLEGGGGDDRLEGGHGNDFLKGGSG----ADVMLGGFGNDTYSVNDP 864
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/239 (13%), Positives = 65/239 (27%), Gaps = 53/239 (22%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ N + M D G G ++ + + G G
Sbjct: 915 TGNALDNRLAGGAGNDMLYGMAGDDWLEGGEGDDWLIGGSGHDVLDGGAGFDRMHGGPGN 974
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ D F + D F + T + + + A+ + AP G
Sbjct: 975 DIYWLRDPRDRILEFE----------GNGYDTVFAFVDTQLPAHVEALVLLGEAPLKGTG 1024
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
N +++ + ++ GGDD+L
Sbjct: 1025 N---RLDNRIIGHDAGSRLWGMGGDDVL-------------------------------- 1049
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+G +G D + G ++ +G+D G +G D F + ++ F
Sbjct: 1050 --------IGGAGQDQLRGGEGDDWLEGGAGDDELAGGAGADRFVFGRHFGQDRLLDFN 1100
>gi|292625366|ref|XP_694153.3| PREDICTED: stromelysin-3 [Danio rerio]
Length = 496
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 56/175 (32%), Gaps = 28/175 (16%)
Query: 20 DQYWSNYFIRYKPDVLTTH----RLSFDITELNPNAQE------VARWALGEWSKVVDLT 69
R + D+ L++ I + +P V R AL WS L
Sbjct: 100 GGLLGGRHRRKRFDLFPGRWDKTDLTYKIIQ-SPRQMNLERVRYVIREALRAWSDETPLN 158
Query: 70 FEET-SIHSDIKFISSNNGYVCTPRYDSRYF-------------MEINFDKADVWRYGIG 115
F E S +DI F + +D EI+FD + W G
Sbjct: 159 FTEVLSGRADIMFDFYRYSHGDYLNFDGPGGILAHAFFPRTYREGEIHFDMDESWTLGNS 218
Query: 116 KGTILSHNALHEIGHALGLMH---PGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
GT L A HEIGH LGL H PG+ + + D Y
Sbjct: 219 MGTDLLQVATHEIGHVLGLQHSKVPGAVMAPFYTFSNPVRLSEDDKRGIQALYGS 273
>gi|254286102|ref|ZP_04961062.1| RTX toxin RtxA [Vibrio cholerae AM-19226]
gi|150423771|gb|EDN15712.1| RTX toxin RtxA [Vibrio cholerae AM-19226]
Length = 4558
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 57/220 (25%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4181 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI 4240
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4241 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4299
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ G D+
Sbjct: 4300 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNYNRINAGAGNDVVK 4359
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 4360 -----LMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 4394
Score = 39.0 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 57/193 (29%), Gaps = 25/193 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNM--- 260
+ I ++ GDD + GG + + +++ + +
Sbjct: 4264 GNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSV 4323
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYA 311
TI + +E +GND N +GNDV +G G D A
Sbjct: 4324 TIGNNNQVE---LGAGNDFANVFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIATA 4380
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRSILEYTA 366
S + E ++ +DV+ + ID + + +
Sbjct: 4381 ISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGID 4440
Query: 367 SYEDLIQVIGQDV 379
+ + G D+
Sbjct: 4441 WQKLWFERSGYDL 4453
Score = 38.6 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 37/164 (22%), Gaps = 11/164 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + N + +G G + ++ S SG DT
Sbjct: 21 SVEYFFTGNYSADDGNNNIVAIGFGG--QIHAYGGDDHVTVGSIGATVYTGSGNDTVV-- 76
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTA 366
S K+ + V A + S + FA ID + A
Sbjct: 77 GGSAYLKVEDSTGHLTVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAA 136
Query: 367 SYE--DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+Y + G F + E
Sbjct: 137 AYNGITRKGLSGNVTFAGAGGYNAL-WHETNQGNLSFTGAGAGN 179
Score = 38.2 bits (87), Expect = 4.8, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 57/200 (28%), Gaps = 28/200 (14%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ Y A ++IVA+ G Y + T+Y G+D +
Sbjct: 26 FTGNYSADDGNNNIVAIGF--GGQIH-----AYGGDDHVTVGSIGATVYTGSGNDTVVGG 78
Query: 235 L------IGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSA 285
+ + N++ A I+ + G+ G+ G +A
Sbjct: 79 SAYLKVEDSTGHLTVKGAAGYADINKSGDGNVSFAGAAGGVSIDHL-GNHGDVSYGGAAA 137
Query: 286 NNVFF--ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N SGN F G+ G + ++ + + A + + R
Sbjct: 138 YNGITRKGLSGNVTFAGAGGYNALWHET---------NQGNLSFTGAGAGNKLDRTWFNR 188
Query: 344 LRFADQCIDSVNVKQRSILE 363
+ + + + +
Sbjct: 189 YQGSHGDVTFDGAGAANSIS 208
>gi|153801709|ref|ZP_01956295.1| RTX toxin RtxA [Vibrio cholerae MZO-3]
gi|124122733|gb|EAY41476.1| RTX toxin RtxA [Vibrio cholerae MZO-3]
Length = 4558
Score = 70.2 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 57/220 (25%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4181 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI 4240
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4241 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4299
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ G D+
Sbjct: 4300 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNYNRINAGAGNDVVK 4359
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 4360 -----LMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 4394
Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 57/193 (29%), Gaps = 25/193 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNM--- 260
+ I ++ GDD + GG + + +++ + +
Sbjct: 4264 GNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSV 4323
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYA 311
TI + +E +GND N +GNDV +G G D A
Sbjct: 4324 TIGNNNQVE---LGAGNDFANVFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIATA 4380
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRSILEYTA 366
S + E ++ +DV+ + ID + + +
Sbjct: 4381 ISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGID 4440
Query: 367 SYEDLIQVIGQDV 379
+ + G D+
Sbjct: 4441 WQKLWFERSGYDL 4453
Score = 38.2 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 64/265 (24%), Gaps = 33/265 (12%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ Y A ++IVA+ G Y + T+Y G+D +
Sbjct: 26 FTGNYSADDGNNNIVAIGF--GGQIH-----AYGGDDHVTVGSIGATVYTGSGNDTVVGG 78
Query: 235 L------IGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSA 285
+ + N++ A I+ + G+ G+ G +A
Sbjct: 79 SAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHL-GNHGDVSYGGAAA 137
Query: 286 NNVFF--ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N SGN F G+ G + + + ++
Sbjct: 138 YNGITRKGLSGNVTFAGAGGYNALLHETNQGNLSFTGAGAGNKLDRTWSNRYQGSHGDVT 197
Query: 344 LRFADQCIDSVN--VKQRSILEYTASYEDLI------------QVIGQDVFESMKHFYEF 389
A + + L+ + + + +
Sbjct: 198 FDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTHQAEDVY 257
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNV 414
+ G Y Y D+ +
Sbjct: 258 TQTRGNIRFEGVGGYNSLYSDVAHG 282
Score = 37.1 bits (84), Expect = 9.0, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 37/145 (25%), Gaps = 10/145 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + N + +G G + ++ S SG DT
Sbjct: 21 SVEYFFTGNYSADDGNNNIVAIGFGG--QIHAYGGDDHVTVGSIGATVYTGSGNDTVV-- 76
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTA 366
S K+ +IV A + S + FA ID + A
Sbjct: 77 GGSAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAA 136
Query: 367 SYE--DLIQVIGQDVFESMKHFYEF 389
+Y + G F +
Sbjct: 137 AYNGITRKGLSGNVTFAGAGGYNAL 161
>gi|78188384|ref|YP_378722.1| alkaline phosphatase [Chlorobium chlorochromatii CaD3]
gi|78170583|gb|ABB27679.1| Alkaline phosphatase [Chlorobium chlorochromatii CaD3]
Length = 2182
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 50/135 (37%), Gaps = 8/135 (5%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
I G++ + YI L T ++ G N TI + + G +GN
Sbjct: 2014 GAARITGGEGNNTVFADGSAQ---YIVLGTG-DDTLHGGAGNDTIGSLDGNDYLYGEAGN 2069
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA----NEH 333
D + G N+ +GND+ DG +G D + Y I A
Sbjct: 2070 DTLSGGDDNDHLSGGTGNDLLDGGAGSDIAMFSGALNDYTITHNAITDTYTVADKVSGRD 2129
Query: 334 KQDFLSDVERLRFAD 348
D L+++E +FAD
Sbjct: 2130 GVDTLTNMEYCQFAD 2144
Score = 40.5 bits (93), Expect = 0.81, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 29/131 (22%), Gaps = 2/131 (1%)
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYT 365
+ +I E V+ + L + + L ++ L
Sbjct: 2007 VEFATVIGAARITGGEGNNTVFADGSAQYIVLGTGDDTLHGGAGNDTIGSLDGNDYLYGE 2066
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A + L D G DI L Y N A +
Sbjct: 2067 AGNDTLSGGDDNDHLSGGTGNDLLDGGAGSDIAM-FSGALNDYTITHNAITDTYTVADKV 2125
Query: 426 YITHGVKEGRN 436
GV N
Sbjct: 2126 SGRDGVDTLTN 2136
>gi|99077980|ref|YP_611239.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Ruegeria sp.
TM1040]
gi|99034923|gb|ABF61977.1| peptidase S8 and S53 subtilisin kexin sedolisin [Ruegeria sp.
TM1040]
Length = 862
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQT----IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ N+ Y + D + D+ G D ++ + + ++L+ +
Sbjct: 505 SVASDNDTYIFTDEFSDYAGRSSHNTAFDDAAGLDTINAAAVSAA-STLNLSEGT----- 558
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G ++I + IESV GND + G++ NNVF GND +G G+D A +
Sbjct: 559 GNIDGVSITF-SGIESVYTGDGNDNLTGDAGNNVFQAGRGNDTINGGDGIDQAVVLANQF 617
Query: 315 LYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
Y + +N + +D L+D+E ++FAD +D + L
Sbjct: 618 NYSVAINKNGAVTVTDRNASEGEDGLTDIEMIKFADATLDLTQFVSTASL 667
>gi|17233144|ref|NP_490234.1| hypothetical protein all7128 [Nostoc sp. PCC 7120]
gi|17135666|dbj|BAB78212.1| all7128 [Nostoc sp. PCC 7120]
Length = 3083
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 71/284 (25%), Gaps = 27/284 (9%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
DI A+ A + GN+ + + GGDD ++ + ID
Sbjct: 2765 DIFALTVT--ASNINPGNDT---NNSLSGTSSADVLNGFGGDDYIE---GLAGNDTIDGG 2816
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV---------------FFE 291
+ + G + + I I G GND + A N
Sbjct: 2817 IGRFDRLFGGDGDDAITDPDGILGAHGGLGNDTINVTFAANWDNDSNPNNSPRSDGKITG 2876
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK---QDFLSDVERLRFAD 348
G+D + FF ++ ++ D + +
Sbjct: 2877 GYGDDNITVTMNNSKFFINMKGDEPVNNAQGGNDVITLLGSYQNAIVDLGGGDDTFIGGN 2936
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGS 407
+ + ++L G D+ G+DI +F S
Sbjct: 2937 GSDNVSGGAGNDTIFGFGGNDNLTGNDGDDILVGGSGNDRLTGGSGKDIFSFSSLADGID 2996
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+V A + + V + F D
Sbjct: 2997 TITDFSVADDKIRVNAAGFGSGLVAGNLDASQFVLGSSAQDGSD 3040
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/321 (13%), Positives = 80/321 (24%), Gaps = 13/321 (4%)
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
A++++ ++D+ L I+ N + L T+S + L G D E +
Sbjct: 2753 VTASDNQGTTVTDIFALTVTASNINPGN-DTNNSLSGTSSADVLNGFGGDDYIEGLAGND 2811
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
GR + D + G+ G I + D+ +
Sbjct: 2812 TIDGGIGRFDRLFGGDGDDAITDPDGILGAHGGLGNDT-INVTFAANWDNDSNPNNSPRS 2870
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ D + F N +E + +N G
Sbjct: 2871 DGKITGGYGDDNITVTMNNSKFFINMKGDEPVNNAQGGNDVITLLGSYQNAIVDLGGGDD 2930
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
+G + +++L D + +G D G +F
Sbjct: 2931 TFIGGNGSDNVSGGAGNDTIFGFGGNDNLTGNDGDDILVGGSGND--RLTGGSGKDIFSF 2988
Query: 568 NPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKAD 627
+ L D F + G G+ + + S
Sbjct: 2989 SS---LADGIDTITDFSVADDKIRVN------AAGFGSGLVAGNLDASQFVLGSSAQDGS 3039
Query: 628 LSLSFDHKKVDLYTDYFGDGN 648
++ L D G G
Sbjct: 3040 DRFIYNQATGALLFDVDGIGA 3060
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 46/321 (14%), Positives = 86/321 (26%), Gaps = 23/321 (7%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFM---EINFDKADVWRYGIGKGTILSHNALHE 127
S + V + ADV G I
Sbjct: 2753 VTASDNQGTTVTDIFALTVTASNINPGNDTNNSLSGTSSADVLNGFGGDDYIEGLAGNDT 2812
Query: 128 IGHALGL---MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
I +G + G + ++ F +
Sbjct: 2813 IDGGIGRFDRLFGGDGDDAITDPDGILGAHGGLGNDTINVTFAANWDNDSNPNNSPRSDG 2872
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+ YG ++ N K + K + GG+D++ L +D
Sbjct: 2873 K-----ITGGYGDDNITVTMNNSKFFINMKGDEPVN--NAQGGNDVITLLGSYQN-AIVD 2924
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L + G + ++ +++ G GND + GN +++ SGND G SG
Sbjct: 2925 LG-GGDDTFIGGNGSDNVSGGAGNDTIFGFGGNDNLTGNDGDDILVGGSGNDRLTGGSGK 2983
Query: 305 DTFFYYA---PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
D F + + + + I +A ++ L + + S
Sbjct: 2984 DIFSFSSLADGIDTITDFSVADDKIRVNAAGFGSGLVAG--NLDASQFVLGSSAQDGSDR 3041
Query: 362 LEYTASYEDL---IQVIGQDV 379
Y + L + IG +
Sbjct: 3042 FIYNQATGALLFDVDGIGANT 3062
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 63/195 (32%), Gaps = 6/195 (3%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGG-DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + Q S + I D G +D +++ + + I G + TI
Sbjct: 867 TVSAFNIPQTYSGVSKIIADGGTKNDTIEIKPDIEISADLKGGAGE-DLIYGGSGSDTIR 925
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G +D V G+ ++ +G D+ +G +G DT Y + + I N
Sbjct: 926 GGADWDRLYGGDRDDFVYGDDGDDWLDGGAGADILNGGAGFDTASYTSATSAISI----N 981
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + D +E++ + + + + + + + G D
Sbjct: 982 LVTQVSTGDAADDVFQSIEQIVGSRYDDTLIGDEDNNEFDGGEGNDFISGGAGDDRLSPG 1041
Query: 384 KHFYEFGLSEGRDIT 398
G D
Sbjct: 1042 WGDDVIDGGTGTDTL 1056
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 66/252 (26%), Gaps = 18/252 (7%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
G + F I D G +++ + LG
Sbjct: 1418 YTWGPSRIRYSNFERFDIIGTRYGDELFGGNLDDSLMGGGGADTLKAGLGDDIYILDTQN 1477
Query: 144 YPVYGVDNDYENDSFLTSVMS---YFMPQDSMMDASFGYCAT----PMVSDIVAVQKIY- 195
+++ D+ + + P+ + D S T + + +
Sbjct: 1478 AGGSQIEDAGGTDTLRLTTRNPGATNTPRITDADLSLAVPTTGIFGMRRAGTSLIIDLNK 1537
Query: 196 -GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G I I ++ V + + + I
Sbjct: 1538 DGIAASKTDLTILNFFDTVGTGAGTGFIETVANLAGAEILSKLQVGDDTISGSAADDFID 1597
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGSSGLD 305
G+ N T++ +++ G GND + G N+ +GND DG +G D
Sbjct: 1598 GWLSNDTLSGGAGNDTLWGQDGNDFLNGEDGNDSLQGGNGNDTLTPGWGNDVVDGGAGTD 1657
Query: 306 TFFYYAPSYLYK 317
+ +
Sbjct: 1658 VLVLDYSNLNTR 1669
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 60/248 (24%), Gaps = 32/248 (12%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN---YIDLNTESWSSIGGYEK 258
LG++IY ++ Q I D+GG D L LT I S +
Sbjct: 1466 LGDDIYILDTQNAGGS---QIEDAGGTDTLRLTTRNPGATNTPRITDADLSLAVPTTGIF 1522
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
M A ++I + + N F DT A + +
Sbjct: 1523 GMRRAGTSLIIDLNKDGIAASKTDLTILNFF---------------DTVGTGAGTGFIET 1567
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + D +S + L A + L G D
Sbjct: 1568 VANLAGAEILSKLQVGDDTISG------SAADDFIDGWLSNDTLSGGAGNDTLWGQDGND 1621
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
G D + +D+ + + +
Sbjct: 1622 FLNGEDGNDSLQGGNGNDTLTPGW-----GNDVVDGGAGTDVLVLDYSNLNTRAVAWRTL 1676
Query: 439 AFKALEYI 446
+ + Y+
Sbjct: 1677 SGTSGNYL 1684
Score = 44.4 bits (103), Expect = 0.066, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + T+ G GND + G + ++ G+DV DG +G DT S
Sbjct: 1004 GSRYDDTLIGDEDNNEFDGGEGNDFISGGAGDDRLSPGWGDDVIDGGTGTDTLVIDYSS 1062
>gi|190895183|ref|YP_001985476.1| putative hemolysin-type calcium-binding protein [Rhizobium etli CIAT
652]
gi|190700844|gb|ACE94926.1| putative hemolysin-type calcium-binding protein [Rhizobium etli CIAT
652]
Length = 1253
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 76/462 (16%), Positives = 138/462 (29%), Gaps = 32/462 (6%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG------- 133
F + + T S + D G G T + +N ++
Sbjct: 597 FTITGSSGADTITGGSSADIITGGSGVDTLAGGGGDDTFVVNNGDFAGAESINGGAGANM 656
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY-------CATPMVS 186
L G+ N + S +V + + G +T
Sbjct: 657 LSVAGTNNFTTGILANLQTLSGSSGSDTVTLTGAEMNGFTTVNLGSGGDTVNLTSTSTGL 716
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+ ++ G S + + + TI S G D +
Sbjct: 717 NGRNDIQLSGLEAISAAAALAGVVINLSSQSEGFTITGSAGADTIT-------------G 763
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
++ G N T+ +S+ GS G+DV+IG N++ ++ SG+D+ DG +G DT
Sbjct: 764 GGGNDTLDGGSGNDTLVGAGGNDSLFGSGGSDVLIGGEGNDILYDESGDDILDGGNGDDT 823
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + N + AN + F + + T+
Sbjct: 824 MSDFGGAVASLSGGAGNDAMWTGANMTGSVDGGSDRDVLFVTGGNLTGLAISNVEIYTTS 883
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEG-RDITFDSYLYLGSYDDL---RNVFGSDRGAA 422
+ L V D F+++ F + + DI L D+L V +D A
Sbjct: 884 AEFVLGTVAQLDGFDTITTFDDPAHASSLVDIRISGGGSLDLSDELGLRSAVVTADATAG 943
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR-FV 481
G L+ + ++ L+ A G D +
Sbjct: 944 NGITTGVGDDTITGGAGNDTLDGGSGNDTLVGAGGSDSLFGSGGSDVLIGGEGNDILYDE 1003
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
+ D L G+ DD + FG + + + G+ G N
Sbjct: 1004 SGDDILDGGNGDDTMSDFGGAVASLSGGAGSDGMWTGANMTG 1045
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 62/565 (10%), Positives = 130/565 (23%), Gaps = 93/565 (16%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + T S + D G G T + +N
Sbjct: 439 SGNDIIAINGTSGADTITGSSSADIITGGSGVDTLAGGGGDDTFVVNNGDF--------- 489
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + ++F T ++ + + ++ +V
Sbjct: 490 TGAESIDGGAGANMLFVAGTNNFTTGTLTNLRTLNGSSGSETVTLTGTEMNGFTSVNLGS 549
Query: 196 GAPKGSLGNNIYKIE-VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G+ +L + + ++ I + + + L + + + +I
Sbjct: 550 GSDTVNLTSTSTGLNGRNDNQLSGVEAISAAAALAGVVINLSSQSEGFTITGSSGADTIT 609
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN----NVFFESSGND-------------- 296
G I + ++++ G G+D + N+ + +G +
Sbjct: 610 GGSSADIITGGSGVDTLAGGGGDDTFVVNNGDFAGAESINGGAGANMLSVAGTNNFTTGI 669
Query: 297 -----VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD--- 348
GSSG DT + L+ ++ +
Sbjct: 670 LANLQTLSGSSGSDTVTLTGAEMNGFTTVNLGSGGDTVNLTSTSTGLNGRNDIQLSGLEA 729
Query: 349 ---------------------------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
L+ + + L+ G D
Sbjct: 730 ISAAAALAGVVINLSSQSEGFTITGSAGADTITGGGGNDTLDGGSGNDTLVGAGGNDSLF 789
Query: 382 SMKHFYEFGLSEGRDITFDSYLY----LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
EG DI +D G+ DD + FG + + + G N
Sbjct: 790 GSGGSDVLIGGEGNDILYDESGDDILDGGNGDDTMSDFGGAVASLSGGAGNDAMWTGANM 849
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG-------------RFVTFD 484
D F +L + + + TFD
Sbjct: 850 TGSVDG-----GSDRDVLFVTGGNLTGLAISNVEIYTTSAEFVLGTVAQLDGFDTITTFD 904
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF--------KALEYIASHEDL 536
+ S D+R G + + V + A ++ L
Sbjct: 905 DPAHASSLVDIRISGGGSLDLSDELGLRSAVVTADATAGNGITTGVGDDTITGGAGNDTL 964
Query: 537 INAFADAPDLVQAGKDHFSNFGYEE 561
+ + G D G +
Sbjct: 965 DGGSGNDTLVGAGGSDSLFGSGGSD 989
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 62/434 (14%), Positives = 117/434 (26%), Gaps = 29/434 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI--GHAL 132
T +DV G G + + + G+
Sbjct: 762 TGGGGNDTLDGGSGNDTLVGAGGNDSLFGSGGSDVLIGGEGNDILYDESGDDILDGGNGD 821
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV--- 189
M G ND + ++ + G +S++
Sbjct: 822 DTMSDFGGAVASLSGGAGNDAMWTGANMTGSVDGGSDRDVLFVTGGNLTGLAISNVEIYT 881
Query: 190 --AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD-DLLDLTLIGGVKNYIDLN 246
A + + + I + S + GG DL D + D
Sbjct: 882 TSAEFVLGTVAQLDGFDTITTFDDPAHASSLVDIRISGGGSLDLSDELGLRSAVVTADAT 941
Query: 247 TE-------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES------- 292
+I G N T+ + +++VG+ G+D + G+ ++V
Sbjct: 942 AGNGITTGVGDDTITGGAGNDTLDGGSGNDTLVGAGGSDSLFGSGGSDVLIGGEGNDILY 1001
Query: 293 --SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
SG+D+ DG +G DT + + + + AN + F
Sbjct: 1002 DESGDDILDGGNGDDTMSDFGGAVASLSGGAGSDGMWTGANMTGTVDGGSGRDVLFVTGG 1061
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ + T++ L V D F+++ F + + D + G D
Sbjct: 1062 NLTGLAISNVEIYTTSAEFVLGTVTQLDGFDTITTFDDPAHA---SSLVDIRISGGGSLD 1118
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L + G +A + A ++ L + +G D F
Sbjct: 1119 LSDELG--LRSAVVTADATAGNGITTGVGNDTITGGAGNDTLDGGSGNDTISGGLGNDTF 1176
Query: 471 SNFGCEEGRFVTFD 484
G V D
Sbjct: 1177 VFAANLSGNSVIGD 1190
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/261 (13%), Positives = 64/261 (24%), Gaps = 10/261 (3%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + + T + D G ++ +
Sbjct: 936 VTADATAGNGITTGVGDDTITGGAGNDTLDGGSGNDTLVGAGGSDSLFGSGGSDVLIG-- 993
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G + Y+ + ++ + + D + D + +
Sbjct: 994 GEGNDILYDESGDDILDGGNGDDTMSDFGGAVASLSGGAGSDGMWTGANMTGTVDGGSGR 1053
Query: 193 KIYGAPKGSLGN----NIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNT 247
+ G+L N+ + T D D I ++
Sbjct: 1054 DVLFVTGGNLTGLAISNVEIYTTSAEFVLGTVTQLDGFDTITTFDDPAHASSLVDIRISG 1113
Query: 248 ESW---SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
S G + A T + GND + G + N+ SGND G G
Sbjct: 1114 GGSLDLSDELGLRSAVVTADATAGNGITTGVGNDTITGGAGNDTLDGGSGNDTISGGLGN 1173
Query: 305 DTFFYYAPSYLYKIYRFENAI 325
DTF + A + N
Sbjct: 1174 DTFVFAANLSGNSVIGDFNGG 1194
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 47/428 (10%), Positives = 97/428 (22%), Gaps = 85/428 (19%)
Query: 204 NNIYKIEVQQKDSPFIQT---IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
Q + + + + S G+ + + + SS G N
Sbjct: 383 GTAVTFNANQFGASGLSSSLDLRGSTGNQTVIIQNASNFSAAAWTFGGNGSSAWGNSGND 442
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------------ 308
IA + G+SG D + G+S+ ++ SG D G G DTF
Sbjct: 443 IIA-------INGTSGADTITGSSSADIITGGSGVDTLAGGGGDDTFVVNNGDFTGAESI 495
Query: 309 ---------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+ A + + N + ++ + L+ E F + S +
Sbjct: 496 DGGAGANMLFVAGTNNFTTGTLTNLRTLNGSSGSETVTLTGTEMNGFTSVNLGSGSDTVN 555
Query: 360 S-----------------------------------------ILEYTASYEDLIQVIGQD 378
+ ++ + + D
Sbjct: 556 LTSTSTGLNGRNDNQLSGVEAISAAAALAGVVINLSSQSEGFTITGSSGADTITGGSSAD 615
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP- 437
+ G D ++ + D + GA A G
Sbjct: 616 IITGGSGVDTLAGGGGDDT------FVVNNGDFAGAESINGGAGANMLSVAGTNNFTTGI 669
Query: 438 -DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ L + + + A+ V + + +
Sbjct: 670 LANLQTLSGSSGSDTVTLTGAEMNGFTTVNLGSGGDTVNLTSTSTGLNGRNDIQLSG--L 727
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPD---AFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ A EG + ++ L + + G D
Sbjct: 728 EAISAAAALAGVVINLSSQSEGFTITGSAGADTITGGGGNDTLDGGSGNDTLVGAGGNDS 787
Query: 554 FSNFGYEE 561
G +
Sbjct: 788 LFGSGGSD 795
>gi|261494687|ref|ZP_05991167.1| leukotoxin structural protein [Mannheimia haemolytica serotype A2
str. OVINE]
gi|73621158|sp|Q9EV29|LKA2D_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762040|gb|AAG40298.1|AF314514_1 leukotoxin [Mannheimia haemolytica]
gi|261309652|gb|EEY10875.1| leukotoxin structural protein [Mannheimia haemolytica serotype A2
str. OVINE]
Length = 953
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/331 (13%), Positives = 100/331 (30%), Gaps = 28/331 (8%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
AD L++ + T + F L P + R G++ + L
Sbjct: 507 ADKLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITKLNINRV 566
Query: 74 SI------HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F +N D+ + + + + G G + + E
Sbjct: 567 DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGTTE 626
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
I G G Y +D E + +V + + T +V +
Sbjct: 627 IDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRF--VETGKALHEVTSTHTALVGN 684
Query: 188 IVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++ + + G Y + K ++ I + +D+ +
Sbjct: 685 REEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFN--------- 729
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + TI + + + G G+D++ G + ++ GND+ G G D
Sbjct: 730 ----DAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKGDDI 785
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
F + I + + ++ + +D
Sbjct: 786 FVHRKGDGNDIITDSDGNDKLSFSDSNLKDL 816
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 61/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I G+D V
Sbjct: 571 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-IAKLGEGDDNVF 619
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 620 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKALHEVTSTHT 679
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L VE + K +
Sbjct: 680 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVD 739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 740 TIDGNDGNDRLFGGKGDDILDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRKGD 792
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + D L + S+
Sbjct: 793 GNDIITDSDGNDKLSFSDSN 812
>gi|113477363|ref|YP_723424.1| hemolysin-type calcium-binding protein [Trichodesmium erythraeum
IMS101]
gi|110168411|gb|ABG52951.1| Hemolysin-type calcium-binding region [Trichodesmium erythraeum
IMS101]
Length = 393
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/303 (14%), Positives = 85/303 (28%), Gaps = 15/303 (4%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ + +G G K + Q + I+ G D +LIGG N +
Sbjct: 20 DLMEGFGGNDTIFGE---KGDDTQSGGDGVDEIFGGIGSD----SLIGGEDNDFLKAEDG 72
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G + +I +++ G +GND + G + +++ S G D G G DT
Sbjct: 73 RDLAFGGPGDDSIEGGPGNDTLTGENGNDSLFGETGDDLIIGSQGLDYIIGGGGNDTLRG 132
Query: 310 YAPSYL-------YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV-NVKQRSI 361
+ I+ + + D + D++
Sbjct: 133 NQGNDSLVGNVDDDLIFGDQGNDTGSGGTGNDSLLGGDGDDSLDGGSGNDTIFGESGNDS 192
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L + + G D ++ +G D F + D N
Sbjct: 193 LFGIIGSDFINGNRGNDQVFGGENADNLRGGKGNDTIFGELENDSLFGDSNNDLVIGGIG 252
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ + D +L ++ L + G+D F G +
Sbjct: 253 DDTLFGGKNNDTLQGSDGNDSLLGDLGNDILFGGGGEDTLTGGEGEDTFVLPGELGSIDI 312
Query: 482 TFD 484
D
Sbjct: 313 IND 315
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/301 (17%), Positives = 90/301 (29%), Gaps = 18/301 (5%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ F D G T + + EI +G +
Sbjct: 10 NNFLIGSPEPDLMEGFGGNDTIFGEKGDDTQSGGDGVDEIFGGIGSDSLIGGEDNDFLKA 69
Query: 149 VDNDY------ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI--YGAPKG 200
D +DS + + ++ D+ FG ++ + I G
Sbjct: 70 EDGRDLAFGGPGDDSIEGGPGNDTLTGENGNDSLFGETGDDLIIGSQGLDYIIGGGGNDT 129
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
GN + + I+ G+D GG N L + S+ G N
Sbjct: 130 LRGN---QGNDSLVGNVDDDLIFGDQGNDT----GSGGTGNDSLLGGDGDDSLDGGSGND 182
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + +S+ G G+D + GN N+ F D G G DT F ++
Sbjct: 183 TIFGESGNDSLFGIIGSDFINGNRGNDQVFGGENADNLRGGKGNDTIF--GELENDSLFG 240
Query: 321 FENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
N +V F + + L+ +D + IL + L G+D
Sbjct: 241 DSNNDLVIGGIGDDTLFGGKNNDTLQGSDGNDSLLGDLGNDILFGGGGEDTLTGGEGEDT 300
Query: 380 F 380
F
Sbjct: 301 F 301
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 73/298 (24%), Gaps = 14/298 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
SP + GG+D + G + + I G + ++ +
Sbjct: 10 NNFLIGSPEPDLMEGFGGNDTI----FGEKGDDTQSGGDGVDEIFGGIGSDSLIGGEDND 65
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G D+ G ++ GND G +G D+ F + I + +
Sbjct: 66 FLKAEDGRDLAFGGPGDDSIEGGPGNDTLTGENGNDSLF--GETGDDLIIGSQGLDYIIG 123
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ LR V ++ + G D
Sbjct: 124 GGGNDT--------LRGNQGNDSLVGNVDDDLIFGDQGNDTGSGGTGNDSLLGGDGDDSL 175
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G D F + + + F + + + R + +
Sbjct: 176 DGGSGNDTIFGESGNDSLFGIIGSDFINGNRGNDQVFGGENADNLRGGKGNDTIFGELEN 235
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ L + + +G D + + + LG + G
Sbjct: 236 DSLFGDSNNDLVIGGIGDDTLFGGKNNDTLQGSDGNDSLLGDLGNDILFGGGGEDTLT 293
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/293 (13%), Positives = 77/293 (26%), Gaps = 9/293 (3%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
D G ++ I + GL + G + G
Sbjct: 74 DLAFGGPGDDSIEGGPGNDTLTGENGNDSLFGETGDDLIIGSQGLDYIIGGGGNDTLRGN 133
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ + + + + G + + D G
Sbjct: 134 QGNDSLVGNVDDDLIFGDQGNDTGSGGTG-NDSLLGGDGDDSLDGGSGNDTIFGE---SG 189
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
I + G+D + L GG N S+ G N +
Sbjct: 190 NDSLFGIIGSDFINGNRGNDQVFGGENADNLRGGKGNDTIFGELENDSLFGDSNNDLVIG 249
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G ND + G+ N+ GND+ G G DT + + +
Sbjct: 250 GIGDDTLFGGKNNDTLQGSDGNDSLLGDLGNDILFGGGGEDTLTGGEGEDTFVLPGELGS 309
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
I + + +DFL+ L F D T + + L+ ++
Sbjct: 310 IDIINDFNPLEDFLALSGNLTFEDLSFQQQTGLNFRDTLITINNDRLLAILVN 362
Score = 47.1 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 70/304 (23%), Gaps = 23/304 (7%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFY-------YAPSYLYKIYRFENAIIVYDA 330
++G+ NN S D+ +G G DT F + +I+ + +
Sbjct: 2 ANILGDDNNNFLIGSPEPDLMEGFGGNDTIFGEKGDDTQSGGDGVDEIFGGIGSDSLIGG 61
Query: 331 NEHKQDFLSDVERLRFAD----------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ D L F L + +I G D
Sbjct: 62 EDNDFLKAEDGRDLAFGGPGDDSIEGGPGNDTLTGENGNDSLFGETGDDLIIGSQGLDYI 121
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
++G D + + D N GS G
Sbjct: 122 IGGGGNDTLRGNQGNDSLVGNVDDDLIFGDQGNDTGSGGTGNDSLLGGDGDDSLDGGSGN 181
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE------GRFVTFDSYLYLGSYDD 494
+ + ++ L G D + G F + D
Sbjct: 182 DTIFGESGNDSLFGIIGSDFINGNRGNDQVFGGENADNLRGGKGNDTIFGELENDSLFGD 241
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
N + + D +L ++ L + G+D F
Sbjct: 242 SNNDLVIGGIGDDTLFGGKNNDTLQGSDGNDSLLGDLGNDILFGGGGEDTLTGGEGEDTF 301
Query: 555 SNFG 558
G
Sbjct: 302 VLPG 305
>gi|332968742|gb|EGK07793.1| hemolysin [Kingella kingae ATCC 23330]
Length = 956
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 2/113 (1%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTES--WSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+ D L + D S G + N T+ + + + G +G+D +
Sbjct: 706 HGYQTTDTLKSVEEIVGSQFSDTFKGSKFADIFHGGDGNDTLEGNDGDDRLFGGNGDDHL 765
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G + +++ GNDV +G G D + +Y + + A+
Sbjct: 766 YGGNGDDLLDGGKGNDVINGGDGNDVYISRKGDGNDTLYDSHGSDKLAFADAD 818
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 38/128 (29%), Gaps = 15/128 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
K S F + G+D L+ + + G + +
Sbjct: 725 FSDTFKGSKFADIFHGGDGNDTLE-------------GNDGDDRLFGGNGDDHLYGGNGD 771
Query: 269 ESVVGSSGNDVVIGNSANNVFFE--SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G GNDV+ G N+V+ GND S G D + I
Sbjct: 772 DLLDGGKGNDVINGGDGNDVYISRKGDGNDTLYDSHGSDKLAFADADLSELTIERTAQGI 831
Query: 327 VYDANEHK 334
+ N+
Sbjct: 832 MIKRNDGS 839
Score = 52.5 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 45/208 (21%), Gaps = 45/208 (21%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVF----DGSSGLDTFFYYAP----SYLYKIYRF 321
+V SGND + +G+D DG G + Y + R
Sbjct: 612 NVNAGSGNDDIFAGQGKMNVDGGTGHDRVFYSKDGGLGQ--VNVDGTKATEAGSYTVNRS 669
Query: 322 ENAIIVY----------------------------DANEHKQDFLSDVERLRFADQCIDS 353
N Y + D L VE + +
Sbjct: 670 INNGSFYHEVIKRQTTQVGKRTETLEYRDFELKRPEHGYQTTDTLKSVEEIVGSQFSDTF 729
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
K I + L G D G D+ G +D+ N
Sbjct: 730 KGSKFADIFHGGDGNDTLEGNDGDDRLFGGNGDDHLYGGNGDDLL-----DGGKGNDVIN 784
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFK 441
G D G +
Sbjct: 785 --GGDGNDVYISRKGDGNDTLYDSHGSD 810
>gi|126464829|ref|YP_001041805.1| hemolysin-type calcium-binding region [Rhodobacter sphaeroides ATCC
17029]
gi|126106644|gb|ABN79169.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides ATCC
17029]
Length = 313
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 49/180 (27%), Gaps = 31/180 (17%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS---------SGLD 305
G N + + +VG GND + G + + +G+D+ DG +G D
Sbjct: 28 GTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGNGDDLLDGGFYHDACYGQAGND 87
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDAN----------------------EHKQDFLSDVER 343
TF +Y + + + +E
Sbjct: 88 TFRIRGVDLADDVYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPFGPYVVKSIEI 147
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + + + + L + L G DV M+ G D+
Sbjct: 148 VIGSARADVLLGSRLAETLSGGLGNDRLEGRGGADVLRGMEGADALFGGTGNDLLLGGAG 207
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/257 (15%), Positives = 74/257 (28%), Gaps = 43/257 (16%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI--GHALGLMHPGSY--- 140
+ TP + AD G G TI + + + G+ L+ G Y
Sbjct: 20 SALAQTPAGTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGNGDDLLDGGFYHDA 79
Query: 141 ---------------NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+ VYG D + + D
Sbjct: 80 CYGQAGNDTFRIRGVDLADDVYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPFGP 139
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ +++ + G+ + S +T+ G+D L+
Sbjct: 140 YVVKSIEIVIGSARA----------DVLLGSRLAETLSGGLGNDRLE------------- 176
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G E + T + ++G +GND + G +V +GND+ G G D
Sbjct: 177 GRGGADVLRGMEGADALFGGTGNDLLLGGAGNDRLDGQWERDVLVGGAGNDILIGGGGAD 236
Query: 306 TFFYYAPSYLYKIYRFE 322
F + +I F
Sbjct: 237 RFVFAGNFGRDRIRDFS 253
Score = 40.5 bits (93), Expect = 0.87, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 42/218 (19%), Gaps = 8/218 (3%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT----FDSYLYLGSYD 409
+L + L+ G D G D+ + Y + +
Sbjct: 27 AGTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGNGDDLLDGGFYHDACYGQAGN 86
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
D + G D A Y G
Sbjct: 87 DTFRIRGVD--LADDVYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPFGPYVVKS 144
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
V S L L N RG A G L
Sbjct: 145 IEIVIGSARADVLLGSRLAETLSGGLGNDRLEGRGGADVLRGMEGADALFGGTGNDLLLG 204
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
A ++ L + + AG D G F
Sbjct: 205 GAGNDRLDGQWERDVLVGGAGND--ILIGGGGADRFVF 240
>gi|149916055|ref|ZP_01904578.1| RTX toxins and related Ca2+-binding proteins-like protein
[Roseobacter sp. AzwK-3b]
gi|149810129|gb|EDM69977.1| RTX toxins and related Ca2+-binding proteins-like protein
[Roseobacter sp. AzwK-3b]
Length = 664
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 21/160 (13%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + I+ G D + +GG + + + + G N +A
Sbjct: 383 STDDDLSGTDADDLIHAGDGADTV----LGGAGDDLLIGAAGDDILTGGSGNDRLAGEQG 438
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G G+D++ G + +++ ++ +G D+ G +G DT + +++ I+
Sbjct: 439 NDTLDGGVGDDILTGGAGDDILWDGTGADLLFGDAGNDTIYLADDLEADQVHGGTGDDIL 498
Query: 328 -----------------YDANEHKQDFLSDVERLRFADQC 350
++ D +E D
Sbjct: 499 VLTAGARTAHVDMAAGKVTRSDSPTDTFDGIEIFTAGDGT 538
Score = 62.5 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 48/146 (32%), Gaps = 5/146 (3%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D I + + G + + I ++V+G +G+D++IG +
Sbjct: 361 AGTDADCFEDPMQAARDITFGLSTDDDLSGTDADDLIHAGDGADTVLGGAGDDLLIGAAG 420
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK---QDFLSDVE 342
+++ SGND G G DT + I++D D +D
Sbjct: 421 DDILTGGSGNDRLAGEQGNDTL--DGGVGDDILTGGAGDDILWDGTGADLLFGDAGNDTI 478
Query: 343 RLRFADQCIDSVNVKQRSILEYTASY 368
L + IL TA
Sbjct: 479 YLADDLEADQVHGGTGDDILVLTAGA 504
>gi|218514638|ref|ZP_03511478.1| putative hemolysin-type calcium binding protein [Rhizobium etli
8C-3]
Length = 468
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/450 (12%), Positives = 107/450 (23%), Gaps = 41/450 (9%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D +TE + R L +S E + F + N
Sbjct: 50 DTYIVDNAGDVVTENAGEGTDTIRTGLATYSLASLANVENLTYTGTAAFTGTGNASANVI 109
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
S AD G G T + + + A G
Sbjct: 110 TGSSGNDTLDGGAGADTLSGGAGNDTYVVDDIADVVVEAAGGG----------------- 152
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D T + SY + + G A + + GA +L
Sbjct: 153 --TDLVKTVLASYTLGANVENLTYTGSSAFAGTGNELDNAITGGAGADTLSGGA--GNDT 208
Query: 213 QKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
T+ GDD D+ + + T + G T
Sbjct: 209 LDGGAGADTLIGGLGDDTYIVDNAGDVVSENAGEGTDTVKTSLTTYTLGANVENLTYTGT 268
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ G++ ++++ G + + GND + + I
Sbjct: 269 AAFTGSGNALDNIITGGTGADHLAGGLGNDT----------YIVDNAGDVVTENVGEGID 318
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKH 385
++VE L + + +++ A + L G D +
Sbjct: 319 TVRTALASYTLAANVENLVYTGAAAFAGTGNGLDNMITGGAGADTLTGGAGNDTLDGGVG 378
Query: 386 FYEFGLSEGRD---ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G D + S + + + + ++ + +T+ A
Sbjct: 379 ADHLIGGTGDDIYIVDNASDVVTENAGEGTDTIRTNLATYSLASLTNVENLTYTGTAAFT 438
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSN 472
AS + + G D
Sbjct: 439 GTGNASANVITGGSGNDTLDGGAGADTLIG 468
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 54/382 (14%), Positives = 97/382 (25%), Gaps = 29/382 (7%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD-------LTLIGGVKNYIDLNTESWSSI 253
GN ++ + +S T+ G+D LD L G YI N +
Sbjct: 4 FAGNGQMRMIMPSPESANADTLSGGAGNDTLDGGAGADHLIGGVGDDTYIVDNAGDVVTE 63
Query: 254 GGYEKNMTI-------------------AQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
E TI T + G++ +V+ G+S N+ +G
Sbjct: 64 NAGEGTDTIRTGLATYSLASLANVENLTYTGTAAFTGTGNASANVITGSSGNDTLDGGAG 123
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
D G +G DT + + + ++VE L + +
Sbjct: 124 ADTLSGGAGNDT-YVVDDIADVVVEAAGGGTDLVKTVLASYTLGANVENLTYTGSSAFAG 182
Query: 355 NVK-QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ + A + L G D + G D ++
Sbjct: 183 TGNELDNAITGGAGADTLSGGAGNDTLDGGAGADTLIGGLGDDTYIVDNAGDVVSENAGE 242
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ + + Y E A + D I D + G + +
Sbjct: 243 GTDTVKTS-LTTYTLGANVENLTYTGTAAFTGSGNALDNIITGGTGADHLAGGLGNDTYI 301
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
G VT + + + + Y G + A
Sbjct: 302 VDNAGDVVTENVGEGIDTVRTALASYTLAANVENLVYTGAAAFAGTGNGLDNMITGGAGA 361
Query: 534 EDLINAFADAPDLVQAGKDHFS 555
+ L + G DH
Sbjct: 362 DTLTGGAGNDTLDGGVGADHLI 383
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/391 (13%), Positives = 98/391 (25%), Gaps = 29/391 (7%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGG--------VKNYIDLNTESWSSIGGYEKNM 260
+ GDD + G + I ++S
Sbjct: 30 GNDTLDGGAGADHLIGGVGDDTYIVDNAGDVVTENAGEGTDTIRTGLATYSLASLANVEN 89
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T + G++ +V+ G+S N+ +G D G +G DT + +
Sbjct: 90 LTYTGTAAFTGTGNASANVITGSSGNDTLDGGAGADTLSGGAGNDT-YVVDDIADVVVEA 148
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDV 379
+ ++VE L + + + + A + L G D
Sbjct: 149 AGGGTDLVKTVLASYTLGANVENLTYTGSSAFAGTGNELDNAITGGAGADTLSGGAGNDT 208
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ G D ++ + + + Y E
Sbjct: 209 LDGGAGADTLIGGLGDDTYIVDNAGDVVSENAGEGTDTVKTS-LTTYTLGANVENLTYTG 267
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD------------SYL 487
A + D I D + G + + G VT + +
Sbjct: 268 TAAFTGSGNALDNIITGGTGADHLAGGLGNDTYIVDNAGDVVTENVGEGIDTVRTALASY 327
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITH------GVKEGRNPDAFKALEYIASHEDLINAFA 541
L + + G+ A + + + G L+ + LI
Sbjct: 328 TLAANVENLVYTGAAAFAGTGNGLDNMITGGAGADTLTGGAGNDTLDGGVGADHLIGGTG 387
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNPDLY 572
D +V D + E +I N Y
Sbjct: 388 DDIYIVDNASDVVTENAGEGTDTIRTNLATY 418
>gi|209520246|ref|ZP_03269015.1| Phytanoyl-CoA dioxygenase [Burkholderia sp. H160]
gi|209499321|gb|EDZ99407.1| Phytanoyl-CoA dioxygenase [Burkholderia sp. H160]
Length = 398
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 39/102 (38%), Gaps = 27/102 (26%)
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN----------------P 521
V FD YL + D+ G+ A +HYI +G EGR P
Sbjct: 304 TPIVNFDGDAYLDANPDVAASGGN----ALQHYIYYGRFEGRPLSSAESFQRKARLAQLP 359
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
D F A Y+ ++ D+ A DHF FG EGR
Sbjct: 360 DGFDAKLYLEANPDVAAA-------GVDAVDHFVEFGRAEGR 394
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 28/98 (28%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT---------------- 566
F Y+ ++ D+ + + H+ +G EGR ++
Sbjct: 308 NFDGDAYLDANPDVAASGGN-------ALQHYIYYGRFEGRPLSSAESFQRKARLAQLPD 360
Query: 567 -FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
F+ LYL + D+ A H++ G EGR
Sbjct: 361 GFDAKLYLEANPDVAAA----GVDAVDHFVEFGRAEGR 394
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 28/107 (26%)
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV---------- 481
F Y+ ++ D+ + + H+ +G EGR +
Sbjct: 301 SSLTPIVNFDGDAYLDANPDVAASGGN-------ALQHYIYYGRFEGRPLSSAESFQRKA 353
Query: 482 -------TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
FD+ LYL + D+ A H++ G EGR
Sbjct: 354 RLAQLPDGFDAKLYLEANPDVAAAG----VDAVDHFVEFGRAEGRPL 396
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 40/99 (40%), Gaps = 27/99 (27%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN----------------PDAF 440
+ FD YL + D+ G+ A +HYI +G EGR PD F
Sbjct: 307 VNFDGDAYLDANPDVAASGGN----ALQHYIYYGRFEGRPLSSAESFQRKARLAQLPDGF 362
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
A Y+ ++ D+ A D DHF FG EGR
Sbjct: 363 DAKLYLEANPDVAAAGVD-------AVDHFVEFGRAEGR 394
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSE-KSR 623
+ F+ D YL + D+ G A QHYI +G EGR L S F+ L++
Sbjct: 307 VNFDGDAYLDANPDVAASGG----NALQHYIYYGRFEGRPLS-SAESFQRKARLAQLPDG 361
Query: 624 DKADLSL 630
A L L
Sbjct: 362 FDAKLYL 368
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 25/90 (27%)
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----------------FDSYLYLG 406
Y + D+ G +++H+ +G EGR ++ FD+ LYL
Sbjct: 314 YLDANPDVAASGGN----ALQHYIYYGRFEGRPLSSAESFQRKARLAQLPDGFDAKLYLE 369
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+ D+ A H++ G EGR
Sbjct: 370 ANPDVAAA----GVDAVDHFVEFGRAEGRP 395
>gi|21242933|ref|NP_642515.1| hemolysin-type calcium-binding protein [Xanthomonas axonopodis pv.
citri str. 306]
gi|21108433|gb|AAM37051.1| hemolysin-type calcium binding protein [Xanthomonas axonopodis pv.
citri str. 306]
Length = 1294
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/254 (12%), Positives = 66/254 (25%), Gaps = 15/254 (5%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIG--GYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GD + ++ + S++G TI + V +G+D V +
Sbjct: 1009 GDTTQYVAGSQETFAQLNGSEAFMSNVGKAAGAGADTIYAGAGDDVVNAGAGDDTVFAGT 1068
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----D 340
N++ G+D DG +G D + + ++ A ++ L
Sbjct: 1069 GNDMVAGYDGDDFIDGGAGDDWLDGDYDVVPAAGQQAVETLTIHGAQMVVRNVLEASRHG 1128
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQ--------VIGQDVFESMKHFYEFGLS 392
+ L + IL +++ G D + +
Sbjct: 1129 NDVLDGGAGNDRMRGGGRDDILYGGTGNDEIFGDQDRMNGPETGDDFLDGGEGDDTLVGG 1188
Query: 393 EGRDITF-DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
G D+ + + DD + + A R G L +
Sbjct: 1189 GGADVLLGGAGADILEGDDAADQVDAKWHGADRLDGGAGNDSMYGGGGDDVLAGGEGDDW 1248
Query: 452 LINAFADAPDLVQV 465
L
Sbjct: 1249 LAAKATTGWPGRTS 1262
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 1/87 (1%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ S+ ++++ + + + +G D + N++ GND G G DT+ +
Sbjct: 487 YQSVADDKRDLALGAD-GADVLNTGAGQDFIFAGRGNDILAGGDGNDTLLGGLGSDTYQF 545
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQD 336
+ + + + D
Sbjct: 546 TGGFGRDYVLDQDGLGAIQIDGKTLGD 572
Score = 44.4 bits (103), Expect = 0.065, Method: Composition-based stats.
Identities = 33/269 (12%), Positives = 67/269 (24%), Gaps = 17/269 (6%)
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
V + +G+D G G D + +A D + RL A
Sbjct: 902 VLYGGAGDDTLVGGGGADIILADGNGEALVVGNAADA-----HGTGANDPATGQPRLLMA 956
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK--HFYEFGLSEGRDITFDSYLYL 405
+ + L DL G + + + R + D+ Y+
Sbjct: 957 SMALAQIGTTPYDSLGQRIRKTDLRT-FGVNPLSEVDASGLLAMRAQDIRPLEGDTTQYV 1015
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ + + ++++ K + A + + D
Sbjct: 1016 AGSQETFA-----QLNGSEAFMSNVGKAA--GAGADTIYAGAGDDVVNAGAGDDTVFAGT 1068
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD--A 523
G D + + ++ G YD + H V+
Sbjct: 1069 GNDMVAGYDGDDFIDGGAGDDWLDGDYDVVPAAGQQAVETLTIHGAQMVVRNVLEASRHG 1128
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKD 552
L+ A ++ + D G D
Sbjct: 1129 NDVLDGGAGNDRMRGGGRDDILYGGTGND 1157
Score = 39.0 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 54/242 (22%), Gaps = 14/242 (5%)
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ ++ L+ E + + A + + G D
Sbjct: 1009 GDTTQYVAGSQETFAQLNGSEAFM---SNVGKAAGAGADTIYAGAGDDVVNAGAGDDTVF 1065
Query: 382 SMKHFYEFGLSEGRDIT---FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ +G D G YD + H V+
Sbjct: 1066 AGTGNDMVAGYDGDDFIDGGAGDDWLDGDYDVVPAAGQQAVETLTIHGAQMVVRNVLEAS 1125
Query: 439 --AFKALEYIASHEDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDL 495
L+ A ++ + D G D F + G D D L
Sbjct: 1126 RHGNDVLDGGAGNDRMRGGGRDDILYGGTGNDEIFGDQDRMNGPETGDDFLDGGEGDDTL 1185
Query: 496 RNVFGSDRGAAARHY-ITHGVKEGRNPD----AFKALEYIASHEDLINAFADAPDLVQAG 550
G+D I G D L+ A ++ + D G
Sbjct: 1186 VGGGGADVLLGGAGADILEGDDAADQVDAKWHGADRLDGGAGNDSMYGGGGDDVLAGGEG 1245
Query: 551 KD 552
D
Sbjct: 1246 DD 1247
Score = 37.8 bits (86), Expect = 5.6, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 20/76 (26%), Gaps = 2/76 (2%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ V D+ +G +V +G D G D + +
Sbjct: 483 GALNYQSVADDKRDLALGADGADVLNTGAGQDFIFAGRGNDIL--AGGDGNDTLLGGLGS 540
Query: 325 IIVYDANEHKQDFLSD 340
+D++ D
Sbjct: 541 DTYQFTGGFGRDYVLD 556
>gi|307720204|ref|YP_003891344.1| Lipopolysaccharide biosynthesis protein [Sulfurimonas autotrophica
DSM 16294]
gi|306978297|gb|ADN08332.1| Lipopolysaccharide biosynthesis protein [Sulfurimonas autotrophica
DSM 16294]
Length = 620
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 13/84 (15%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
D F Y+ ++ D I A P H+ +G +EGR+ + F+ YL++Y+D+
Sbjct: 18 DLFDIKYYLFTYTD-IRAMDIDPIW------HYIKYGADEGRNPSDKFDTSFYLSTYNDV 70
Query: 580 WNVFGSDRSAAAQHYITHGMKEGR 603
HYI HG EGR
Sbjct: 71 K----EKGVNPLAHYILHGKNEGR 90
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 43/127 (33%), Gaps = 25/127 (19%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD YL +Y D D HYI +G EGRNP F Y++++ D+
Sbjct: 20 FDIKYYLFTYTD-IRAMDIDPIW---HYIKYGADEGRNPSDKFDTSFYLSTYNDVKEK-G 74
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSI--------TFNPDL---YLTSYDDLWNVFGSDRSAA 590
P H+ G EGR + + Y Y + N +D
Sbjct: 75 VNPL------AHYILHGKNEGRKTSKSNYSNKSSDAVSIPKY--KYVKVNNALKNDSVCI 126
Query: 591 AQHYITH 597
HY
Sbjct: 127 FAHYDKD 133
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYL 487
K + D F Y+ ++ D+ D H+ +G +EGR + FD+
Sbjct: 10 WYKAIKKSDLFDIKYYLFTYTDIRAMDIDP-------IWHYIKYGADEGRNPSDKFDTSF 62
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
YL +Y+D++ + HYI HG EGR
Sbjct: 63 YLSTYNDVKEKGVN----PLAHYILHGKNEGR 90
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 12/85 (14%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD YL +Y D+R + HYI +G EGRNP F Y++++ D+
Sbjct: 19 LFDIKYYLFTYTDIRAM----DIDPIWHYIKYGADEGRNPSDKFDTSFYLSTYNDVKEKG 74
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFV 481
+ H+ G EGR
Sbjct: 75 VNP-------LAHYILHGKNEGRKT 92
Score = 44.8 bits (104), Expect = 0.044, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
I Y +Y D+ + + + H+ ++G EGR+ + FD+ YL +Y+D++
Sbjct: 19 LFDIKYYLFTYTDIRAMD----IDPIWHYIKYGADEGRNPSDKFDTSFYLSTYNDVK--- 71
Query: 416 GSDRGAAARHYITHGVKEGR 435
HYI HG EGR
Sbjct: 72 -EKGVNPLAHYILHGKNEGR 90
>gi|77404853|ref|YP_345425.1| hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
gi|77390503|gb|ABA81684.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
Length = 1544
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 68/546 (12%), Positives = 145/546 (26%), Gaps = 43/546 (7%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG------------------ 117
D + D D GIG
Sbjct: 950 GGDGSDSLDGGADSDVIYGSGGSDLASGGDGDDSIYGGIGSDRIFGGGGDDLLEGDEGSD 1009
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T+ ++ + A G +G + G D+D + + ++
Sbjct: 1010 TLYGNDGNDTLFGAAGFNMLSGGDGNDSLIGGDDDDQLVGGNGADTLIGGQGSDIIIGGD 1069
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
G + ++ V Y + + + S I ++ + +L G
Sbjct: 1070 GGDRLDGGAGVLDVVSYYESDSAVFIDLLSGNTSGGDASGDILAGFEHASGSSYNDSLWG 1129
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+N + + + G + ++ +S+ G +G D + G++ N+ SG D
Sbjct: 1130 DDQNNVLIGLRGADILRGRSGHDDLSGGDGDDSLDGGAGLDRLWGDAGNDTLSGGSGADT 1189
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G +G+DT Y + + + + + D + +E L +D + V
Sbjct: 1190 LSGGTGIDTASYATSASG---LCADLSNSAKNTGDAADDVYAGIENLIGSDFSDELVGSG 1246
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR-----DITFDSYLYLGSYDDLR 412
+ L + ++ L G D + + S D+ + + D
Sbjct: 1247 IGNRLTGGSGHDWLEGRAGADTLDGGSGWDRADYSLSTAGVSADLLTPTSNTGDAAGDTY 1306
Query: 413 NVFGSDRGAAARHYIT-----------HGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
S G+ + G R + L ++ L
Sbjct: 1307 ISIESLGGSNFGDTLAGDNNANTLLGRSGNDVLRGREGDDHLLGHEDNDILDGGAGSDTL 1366
Query: 462 LVQVGKDH--FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI--THGVKE 517
G D + + ++ S ++ D+ + G+ + G
Sbjct: 1367 DGGEGIDRVSYGSATTAVKVDLSDPSINTGDAFGDVYISIENLMGSNNNDNLRGNEGANA 1426
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD 577
+ A + + + QAG D +G F
Sbjct: 1427 IYGASGNDVIYGRAGDDTVTGDDGNDTLYGQAGND--QLYGGSGSDVFVFGAGYARDRIA 1484
Query: 578 DLWNVF 583
D +
Sbjct: 1485 DFEDDV 1490
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/335 (13%), Positives = 85/335 (25%), Gaps = 20/335 (5%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ SG ++L + D + G + + IA +++ G
Sbjct: 461 NGDKLRYAVVASGAPASVNLASLVLDGAVGDARANALD-ASGQTRQVQIAGGEGGDTLRG 519
Query: 274 SSGNDVVIGNSANNVFFESSGNDVF------------DGSSGLDTFFYYAPSYLYKIYRF 321
+ +D++ G+ +V + + GND +G G DT +
Sbjct: 520 GANHDMLSGDGGADVIYGNDGNDTLFIDAADLASGIVNGGRGHDTAIVLGS--EDVVLDL 577
Query: 322 ENAIIVYDANEHKQDFLSDVER-----LRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + A D +S + L+ L A + + G
Sbjct: 578 QAHSLEAAAGGDGNDSISGAQLDLNLYLQGGAGDDSVSGGSGDDTLSGDAGNDTVRGGYG 637
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D K G D+ + GS + G
Sbjct: 638 DDTVFGAKGNDSLQGQAGDDLLLGGEGADSLEGGDGDDIGSGGAGNDVMTGSSGDDHLSG 697
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
D L+ + L + L G D + ++ + S+
Sbjct: 698 DDGADTLDGGMGDDSLEGNEGNDRLLYWRGDDTLIGGLGNDTFVLSTSAEYGSASHWGWV 757
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
+ G + R D + Y A
Sbjct: 758 IMQGGKGQDTLELIGSSDSYSIRKVDDNQWQIYRA 792
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 56/186 (30%), Gaps = 14/186 (7%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
S +Y + D + GG + + S+ G + +
Sbjct: 890 GNDNISGSSGGDLLYGNADKDTI----SGGSGSDSLVGGTGADSLVGGTGADLLLGEAGM 945
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++VG G+D + G + ++V + S G+D+ G G D+ + +I+ ++
Sbjct: 946 DTLVGGDGSDSLDGGADSDVIYGSGGSDLASGGDGDDSIY--GGIGSDRIFGGGGDDLLE 1003
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
L D ++L + LI D
Sbjct: 1004 GDEGSDT--------LYGNDGNDTLFGAAGFNMLSGGDGNDSLIGGDDDDQLVGGNGADT 1055
Query: 389 FGLSEG 394
+G
Sbjct: 1056 LIGGQG 1061
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 77/284 (27%), Gaps = 6/284 (2%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+G S + AD G G + + L + +
Sbjct: 1244 GSGIGNRLTGGSGHDWLEGRAGADTLDGGSGWDRADYSLSTAGVSADLLTPTSNTGDAAG 1303
Query: 145 PVY----GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
Y + D+ + + S D G + + G
Sbjct: 1304 DTYISIESLGGSNFGDTLAGDNNANTLLGRSGNDVLRGREGDDHLLGHEDNDILDGGAGS 1363
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGG--DDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ I+ S D + D + + + + ++ G E
Sbjct: 1364 DTLDGGEGIDRVSYGSATTAVKVDLSDPSINTGDAFGDVYISIENLMGSNNNDNLRGNEG 1423
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
I + + + G +G+D V G+ N+ + +GND G SG D F + A +I
Sbjct: 1424 ANAIYGASGNDVIYGRAGDDTVTGDDGNDTLYGQAGNDQLYGGSGSDVFVFGAGYARDRI 1483
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
FE+ + + + + +L
Sbjct: 1484 ADFEDDVDIILLTGTGISTVGAAMAHARQSGSDVIFDFGGDDVL 1527
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 69/437 (15%), Positives = 110/437 (25%), Gaps = 92/437 (21%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ T+ GDD + + +L G + + L E S+ G + +
Sbjct: 618 SGDDTLSGDAGNDTVRGGYGDDTVFGAKGNDSLQGQAGDDLLLGGEGADSLEGGDGDDIG 677
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP---------- 312
+ + + GSSG+D + G+ + G+D +G+ G D Y+
Sbjct: 678 SGGAGNDVMTGSSGDDHLSGDDGADTLDGGMGDDSLEGNEGNDRLLYWRGDDTLIGGLGN 737
Query: 313 -----SYLYKIYRFENAIIVYDANEHKQDFLS---------------------------- 339
S + + V QD L
Sbjct: 738 DTFVLSTSAEYGSASHWGWVIMQGGKGQDTLELIGSSDSYSIRKVDDNQWQIYRATSASA 797
Query: 340 -------DVERLRFADQC--IDSVNVKQRSILEYTASYED-------------------- 370
D+E LRF D I S++ + +Y S D
Sbjct: 798 KVVIDAMDIEVLRFGDGSTRILSIDTSLDTSADYVRSNTDMWVGDSAASILFGSFVENGT 857
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDI-----TFDSYLYLGSYDDLRNVFGSDRGAAARH 425
L +G+D M EGRD D+ D L D +
Sbjct: 858 LFGWMGEDTLTGMMSSDSIIGGEGRDTVDGGNGNDNISGSSGGDLLYGNADKDTISGGSG 917
Query: 426 Y----ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
G L A + L+ D G +
Sbjct: 918 SDSLVGGTGADSLVGGTGADLLLGEAGMDTLVGGDGSDSLDGGADSDVIYGSGGSDLASG 977
Query: 482 TF-DSYLYLGSYDDLR-----NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
D +Y G D + + Y G F L ++
Sbjct: 978 GDGDDSIYGGIGSDRIFGGGGDDLLEGDEGSDTLYGNDGNDTLFGAAGFNMLSGGDGNDS 1037
Query: 536 LINAFADAPDLVQAGKD 552
LI D + G D
Sbjct: 1038 LIGGDDDDQLVGGNGAD 1054
>gi|84501306|ref|ZP_00999511.1| Nidogen, extracellular region [Oceanicola batsensis HTCC2597]
gi|84390597|gb|EAQ03085.1| Nidogen, extracellular region [Oceanicola batsensis HTCC2597]
Length = 462
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 3/158 (1%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L S +++ G + T+ + + G G DV+ G+ + F G D +G SG
Sbjct: 216 LTPVSGATLTGTDAANTLTGGADGDILRGYEGTDVLRGHGGADWLFGGDGADTLNGGSGD 275
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSI 361
D + + + H D + + + + + + +
Sbjct: 276 DVIEGGTSAADLRDVVYGGDGADRIDAGHGNDLVYGGAGDDVIEGGFGVDELIGQQGDDT 335
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
L A + + G D + G D F
Sbjct: 336 LSGAAWSDLIFGGDGADFLNGGFGYDRLNGGGGGDRFF 373
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 48/145 (33%), Gaps = 11/145 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA + G+ IE + +Y G D +D G N + I G
Sbjct: 265 GADTLNGGSGDDVIEGGTSAADLRDVVYGGDGADRID----AGHGNDLVYGGAGDDVIEG 320
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ +++ G++ +D++ G + G D +G G D FF+
Sbjct: 321 GFGVDELIGQQGDDTLSGAAWSDLIFGGDGADFLNGGFGYDRLNGGGGGDRFFHLGIFD- 379
Query: 316 YKIYRFENAIIVYDANEHKQDFLSD 340
+ V D + + D L
Sbjct: 380 ------HGSDWVQDYSAAEGDALVW 398
>gi|156977658|ref|YP_001448564.1| hypothetical protein VIBHAR_06446 [Vibrio harveyi ATCC BAA-1116]
gi|156529252|gb|ABU74337.1| hypothetical protein VIBHAR_06446 [Vibrio harveyi ATCC BAA-1116]
Length = 959
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 49/184 (26%), Gaps = 30/184 (16%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
F I GDD L ++ G + + + +++
Sbjct: 775 GGYFADVIDGREGDDRLY-------------GEGGDDTLEGGQGDDVLDGGAGNDTLNAG 821
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+GND V + N+V GND G +G D + + D
Sbjct: 822 AGNDTVTAGAGNDVVAGGLGNDTLHGGTGNDQV--SGGEGDDHLTVAYSGSNTLDGGA-G 878
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEY---TASYEDLIQVIGQDVFESMKHFYEFGL 391
D L +++ R Y + LI G D +
Sbjct: 879 DDVL-----------TVETPTSSGRYSSYYKTANNARNTLIGGAGNDRLVGGLGAERYEF 927
Query: 392 SEGR 395
+ G
Sbjct: 928 NRGD 931
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/368 (13%), Positives = 93/368 (25%), Gaps = 39/368 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S F+ N G + + + D G G + + A
Sbjct: 562 GSSSDDFVYGNKGD-DSITVGAGNDFVYGGEGNDTLHGGTGNDRVSGGEGDDHLTVAYSG 620
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G V V+ S Y ++ G +V + A +
Sbjct: 621 SNTLDGGAGDDVLTVETPT---SSGRYSSYYKTANNARNTLIGGAGNDRLVGGLGAERY- 676
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ + G+ I + + I G +L+L + + + S
Sbjct: 677 ----EFNRGDGQDTIRDRDVYGSSVDQIVFGEGIVRDELSLRREGNHLVIMVGGPDSGDS 732
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDV------VIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ + IE +V S G+ V ++ ++ + DV DG G D +
Sbjct: 733 ITIEEGYVNSQHQIEEIVLSDGSTVSPQSLPILSSAEADELRGGYFADVIDGREGDDRLY 792
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
V D D L+ + A
Sbjct: 793 ---GEGGDDTLEGGQGDDVLDGGA-GNDTLN---------------AGAGNDTVTAGAGN 833
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAA 423
+ + +G D + EG D + L G+ DD+ V
Sbjct: 834 DVVAGGLGNDTLHGGTGNDQVSGGEGDDHLTVAYSGSNTLDGGAGDDVLTVETPTSSGRY 893
Query: 424 RHYITHGV 431
Y
Sbjct: 894 SSYYKTAN 901
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/411 (11%), Positives = 104/411 (25%), Gaps = 101/411 (24%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ + + + +G+ + + S +Y + GDD + + G N E
Sbjct: 541 LIHMSISQESRVGD---EFDNDLFGSSSDDFVYGNKGDDSITV----GAGNDFVYGGEGN 593
Query: 251 SSIGGYEKNMTIAQHTVIESVV----------GSSGNDVVI----------------GNS 284
++ G N ++ + + G +G+DV+ N+
Sbjct: 594 DTLHGGTGNDRVSGGEGDDHLTVAYSGSNTLDGGAGDDVLTVETPTSSGRYSSYYKTANN 653
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---------------------- 322
A N +GND G G + + + I +
Sbjct: 654 ARNTLIGGAGNDRLVGGLGAERYEFNRGDGQDTIRDRDVYGSSVDQIVFGEGIVRDELSL 713
Query: 323 ----NAIIVYDANEHKQDFLS----------DVERLRFADQC---------------IDS 353
N +++ D ++ +E + +D +
Sbjct: 714 RREGNHLVIMVGGPDSGDSITIEEGYVNSQHQIEEIVLSDGSTVSPQSLPILSSAEADEL 773
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----FDSYLYLGSY 408
+++ + L G D E + G D D+
Sbjct: 774 RGGYFADVIDGREGDDRLYGEGGDDTLEGGQGDDVLDGGAGNDTLNAGAGNDTVTAGAGN 833
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRN-----PDAFKALEYIASHEDLINAFADAPDLV 463
D + G+D EG + L+ A + L +
Sbjct: 834 DVVAGGLGNDTLHGGTGNDQVSGGEGDDHLTVAYSGSNTLDGGAGDDVLTVETPTSSGRY 893
Query: 464 QV-------GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
++ + + Y + D ++ ++ AA
Sbjct: 894 SSYYKTANNARNTLIGGAGNDRLVGGLGAERYEFNRGDGQDTIVTETCTAA 944
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 54/375 (14%), Positives = 100/375 (26%), Gaps = 44/375 (11%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL---LDLTLIGGVKNYIDLNTESWSSIG 254
L ++ Y + S ++ + S D+L D + + + E + +
Sbjct: 502 NTLKLSDDEYSTNQKNLYSYLFESAHSSTADNLPEGFDKLIHMSISQESRVGDEFDNDLF 561
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + + +S+ +GND V G N+ +GND G G D
Sbjct: 562 GSSSDDFVYGNKGDDSITVGAGNDFVYGGEGNDTLHGGTGNDRVSGGEGDDHL------- 614
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + + + + S + LI
Sbjct: 615 ---TVAYSGSNTLDGGAGDDVLTV----ETPTSSGRYSSYYKTANNA------RNTLIGG 661
Query: 375 IGQDVFESMKHFY--EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH--- 429
G D EF +G+D D +Y S D + G R + +
Sbjct: 662 AGNDRLVGGLGAERYEFNRGDGQDTIRDRDVYGSSVDQIVFGEGIVRDELSLRREGNHLV 721
Query: 430 ---GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--- 483
G + + + + H+ +D + S+ +E R F
Sbjct: 722 IMVGGPDSGDSITIEEGYVNSQHQIEEIVLSDGSTVSPQSLPILSSAEADELRGGYFADV 781
Query: 484 ------DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
D LY DD D G + A ++ +
Sbjct: 782 IDGREGDDRLYGEGGDDTLEGGQGDDVLD----GGAGNDTLNAGAGNDTVTAGAGNDVVA 837
Query: 538 NAFADAPDLVQAGKD 552
+ G D
Sbjct: 838 GGLGNDTLHGGTGND 852
>gi|260820672|ref|XP_002605658.1| hypothetical protein BRAFLDRAFT_264562 [Branchiostoma floridae]
gi|229290993|gb|EEN61668.1| hypothetical protein BRAFLDRAFT_264562 [Branchiostoma floridae]
Length = 499
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/196 (21%), Positives = 59/196 (30%), Gaps = 49/196 (25%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L YW + Y+ T + + + R A WS V LTF E
Sbjct: 120 LVGYYWQKKNLTYRIVRTTPQLSPYVV-------HDAIRRAFNVWSDVTPLTFTEMFHGE 172
Query: 74 ---------SIHSDIK-FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
H D F N R + +FD+ + W +G L
Sbjct: 173 ADIMIDFLWGFHGDGNPFDGPGNTLAHAFFPGPRRGGDTHFDEEEKWTM-TKEGANLFQV 231
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A HE GHALGL H +N + D
Sbjct: 232 ATHEFGHALGLGHSSEHNTIMGPFYRYRD---------------------------PLQL 264
Query: 184 MVSDIVAVQKIYGAPK 199
DI +Q++YGAP+
Sbjct: 265 TEDDIRGIQQLYGAPE 280
>gi|117956039|gb|ABK58601.1| RtxA [Kingella kingae]
Length = 956
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 2/113 (1%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTES--WSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+ D L + D S G + N T+ + + + G +G+D +
Sbjct: 706 HGYQTTDTLKSVEEIVGSQFSDTFKGSKFADIFHGGDGNDTLEGNDGDDRLFGGNGDDHL 765
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G + +++ GNDV +G G D + +Y + + A+
Sbjct: 766 YGGNGDDLLDGGKGNDVINGGDGNDVYISRKGDGNDTLYDSHGSDKLAFADAD 818
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 49/174 (28%), Gaps = 16/174 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
K S F + G+D L+ + + G + +
Sbjct: 725 FSDTFKGSKFADIFHGGDGNDTLE-------------GNDGDDRLFGGNGDDHLYGGNGD 771
Query: 269 ESVVGSSGNDVVIGNSANNVFFE--SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G GNDV+ G N+V+ GND S G D + I
Sbjct: 772 DLLDGGKGNDVINGGDGNDVYISRKGDGNDTLYDSHGSDKLAFADADLSELTIERTAQGI 831
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ N+ ++ E + Q N I + D I D
Sbjct: 832 MIKRND-GSGSINMAEWYKTLSQQNYHGNATDDKIEQIIGKNGDYITSEQIDKL 884
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 45/208 (21%), Gaps = 45/208 (21%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVF----DGSSGLDTFFYYAP----SYLYKIYRF 321
+V SGND + +G+D DG G + Y + R
Sbjct: 612 NVNAGSGNDDIFAGQGKMNVDGGTGHDRVFYSKDGGLGQ--VNVDGTKATEAGSYTVNRS 669
Query: 322 ENAIIVY----------------------------DANEHKQDFLSDVERLRFADQCIDS 353
N Y + D L VE + +
Sbjct: 670 INNGSFYHEVIKRQTTQVGKRTETLEYRDFELKRPEHGYQTTDTLKSVEEIVGSQFSDTF 729
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
K I + L G D G D+ G +D+ N
Sbjct: 730 KGSKFADIFHGGDGNDTLEGNDGDDRLFGGNGDDHLYGGNGDDLL-----DGGKGNDVIN 784
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFK 441
G D G +
Sbjct: 785 --GGDGNDVYISRKGDGNDTLYDSHGSD 810
>gi|332184085|gb|AEE26339.1| Iron-regulated protein frpA [Francisella cf. novicida 3523]
Length = 1829
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/353 (13%), Positives = 97/353 (27%), Gaps = 23/353 (6%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TL G + ++ G N + +++ G SGND ++G + ++ +
Sbjct: 938 DDTLHGSDTDDAIYGKAGDDTLHGGSGNDLLDGGEGDDTLRGDSGNDTLLGGADDDKLYG 997
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-----EHKQDFLSDVERLRF 346
SGND DG G DT + + + ++ D + D++ LR
Sbjct: 998 GSGNDRLDGGEGNDTLRGDSGNDTLLGGEGNDNLVDTDGSNVLDGGAGDDWVQGEGTLRG 1057
Query: 347 ADQCIDS-----------VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ S + +G +
Sbjct: 1058 GSGSDGLWADEYSTNTLEGGQGDDRLYTGYRSTNTIKYNLGDGFDLVARQGDGNAWGRRN 1117
Query: 396 DITFDSYLYLGSY----DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+ ++ + G D + G+D T+G++ + + + +
Sbjct: 1118 EQIYNDKILFGEGITKEDLKLSKEGNDLIIQVGEDSTNGMRVEGFYSTNRTYQSKVNRLE 1177
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
+ + + +F + + S G D G
Sbjct: 1178 FADGTVLRRGVDSIFNPNFVTTEEADDITGSEWSDTIEGKGGDDILRGGIGNDRLD---G 1234
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
G R L +++L++ AG D G G S
Sbjct: 1235 GEGNDTLRGDSGNDTLLGGEGNDNLVDTDGSNVLDGGAGDDWVQGEGTLRGGS 1287
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/362 (12%), Positives = 90/362 (24%), Gaps = 19/362 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHT 266
+ + F G D + + D+ WS +I G + +
Sbjct: 1168 TYQSKVNRLEFADGTVLRRGVDSIFNPNFVTTEEADDITGSEWSDTIEGKGGDDILRGGI 1227
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G GND + G+S N+ GND + G + + +
Sbjct: 1228 GNDRLDGGEGNDTLRGDSGNDTLLGGEGNDNLVDTDGSN--VLDGGAGDDWVQGEG---- 1281
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D L E + S + +G +
Sbjct: 1282 -TLRGGSGSDGLWADEY----STNTLEGGQGDDRLYTGYRSTNTIKYNLGDGFDLVARQG 1336
Query: 387 YEFGLSEGRDITFDSYLYLGSY----DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ ++ + G D + G+D T+G++ +
Sbjct: 1337 DGNAWGRRNEQIYNDKILFGEGITKEDLKLSKEGNDLIIQVGEDSTNGMRVEGFYSTNRT 1396
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ + + + + + +F + + S G D G
Sbjct: 1397 YQSKVNRLEFADGTVLRRGVDSIFNPNFVTTEEADDITGSEWSDTIEGKGGDDILRGGIG 1456
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
G R L +++L++ AG D G G
Sbjct: 1457 NDRLD---GGEGNDTLRGDSGNDTLLGGEGNDNLVDTDGSNVLDGGAGDDWVQGEGTLRG 1513
Query: 563 RS 564
S
Sbjct: 1514 GS 1515
Score = 50.9 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 38/313 (12%), Positives = 74/313 (23%), Gaps = 37/313 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHT 266
+ + F G D + + D+ WS +I G + +
Sbjct: 1396 TYQSKVNRLEFADGTVLRRGVDSIFNPNFVTTEEADDITGSEWSDTIEGKGGDDILRGGI 1455
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G GND + G+S N+ GND + G + + +
Sbjct: 1456 GNDRLDGGEGNDTLRGDSGNDTLLGGEGNDNLVDTDGSN--VLDGGAGDDWVQGEG---- 1509
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D L E + S + +G +
Sbjct: 1510 -TLRGGSGSDGLWADEY----STNTLEGGQGDDRLYTGYRSTNTIKYNLGDGFDLVARQG 1564
Query: 387 YEFGLSEGRDITFDSYLYLG------------SYDDLRNVFGSDRGAAAR----HYITHG 430
+ ++ + G +DL G D R +
Sbjct: 1565 DGNAWGRRNEQIYNDKILFGEGITKEDLKLSKEGNDLIIQVGEDSTNGMRVEGFYSTNRT 1624
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPD---------LVQVGKDHFSNFGCEEGRFV 481
+ N F + + L +D G D ++
Sbjct: 1625 YQSKVNRLEFADGSILNRSDILAGTDSDDTLVGNDNTNIISGNEGDDTLIAGSGDDILEG 1684
Query: 482 TFDSYLYLGSYDD 494
+ Y+ +D
Sbjct: 1685 GAGADTYVIDAND 1697
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 49/331 (14%), Positives = 95/331 (28%), Gaps = 30/331 (9%)
Query: 63 SKVVDLTFEETSIHSDIKF-----ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
+ + F T DI G R + D R G
Sbjct: 1417 DSIFNPNFVTTEEADDITGSEWSDTIEGKGGDDILRGGIGNDRLDGGEGNDTLRGDSGND 1476
Query: 118 TILSHNALHEIGHALG---LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
T+L + G L + + +D S + D
Sbjct: 1477 TLLGGEGNDNLVDTDGSNVLDGGAGDDWVQGEGTLRGGSGSDGLWADEYSTNTLEGGQGD 1536
Query: 175 A--SFGYCATPMV-------SDIVAVQK---IYGAPKGSLGNNIYKIE----------VQ 212
GY +T + D+VA Q +G + N+ +
Sbjct: 1537 DRLYTGYRSTNTIKYNLGDGFDLVARQGDGNAWGRRNEQIYNDKILFGEGITKEDLKLSK 1596
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ + IQ DS ++ +N ++ ++ +A +++V
Sbjct: 1597 EGNDLIIQVGEDSTNGMRVEGFYSTNRTYQSKVNRLEFADGSILNRSDILAGTDSDDTLV 1656
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ +++ GN ++ SG+D+ +G +G DT+ A K + + D
Sbjct: 1657 GNDNTNIISGNEGDDTLIAGSGDDILEGGAGADTYVIDANDTGTKTIKMSSNDDSIDTIR 1716
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
S+VE D + ++
Sbjct: 1717 LDGVNSSNVEFEAVDDDLAILLRGNSGDLIS 1747
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 42/337 (12%), Positives = 73/337 (21%), Gaps = 90/337 (26%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I S D ++ G + I + G E N T+ +
Sbjct: 1420 FNPNFVTTEEADDITGSEWSDTIE----GKGGDDILRGGIGNDRLDGGEGNDTLRGDSGN 1475
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGN-------------------------DVFDGSSG 303
++++G GND ++ +NV +G+ + +G G
Sbjct: 1476 DTLLGGEGNDNLVDTDGSNVLDGGAGDDWVQGEGTLRGGSGSDGLWADEYSTNTLEGGQG 1535
Query: 304 LDTFFYYAPSYLYKIYRFE----------------------------------------- 322
D + S Y
Sbjct: 1536 DDRLYTGYRSTNTIKYNLGDGFDLVARQGDGNAWGRRNEQIYNDKILFGEGITKEDLKLS 1595
Query: 323 --NAIIVYDANEHKQ-------------DFLSDVERLRFADQCI-----DSVNVKQRSIL 362
++ E + S V RL FAD I L
Sbjct: 1596 KEGNDLIIQVGEDSTNGMRVEGFYSTNRTYQSKVNRLEFADGSILNRSDILAGTDSDDTL 1655
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ + G D + G D G+ +
Sbjct: 1656 VGNDNTNIISGNEGDDTLIAGSGDDILEGGAGADTYVIDANDTGTKTIKMSSNDDSIDTI 1715
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
+ E D A+ + DLI+
Sbjct: 1716 RLDGVNSSNVEFEAVDDDLAILLRGNSGDLISKVIVD 1752
>gi|89514399|gb|ABD75068.1| RTX toxin [Ensifer adhaerens]
Length = 234
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 508 RHYITHGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--S 564
RH++ HG EGR+ + F Y+ ++ D+ H+ G EGR
Sbjct: 12 RHFLHHGATEGRHANPFFDTHWYLVNNPDVA-------FSTINPLIHYWRHGALEGRDPH 64
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGM 610
F+ LYL++Y D+ HY+ G EGR + S +
Sbjct: 65 PGFSTGLYLSAYGDV----AYAGYNPLFHYLKWGRAEGRTIWPSAI 106
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 469 HFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFK 525
HF + G EGR FD++ YL + D+ HY HG EGR+P F
Sbjct: 13 HFLHHGATEGRHANPFFDTHWYLVNNPDVA----FSTINPLIHYWRHGALEGRDPHPGFS 68
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
Y++++ D+ P H+ +G EGR+I
Sbjct: 69 TGLYLSAYGDV-AYAGYNPLF------HYLKWGRAEGRTI 101
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 384 KHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-F 440
+HF G +EGR + FD++ YL + D+ HY HG EGR+P F
Sbjct: 12 RHFLHHGATEGRHANPFFDTHWYLVNNPDVA----FSTINPLIHYWRHGALEGRDPHPGF 67
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
Y++++ D+ A + H+ +G EGR +
Sbjct: 68 STGLYLSAYGDVAYAGYNPLF-------HYLKWGRAEGRTI 101
>gi|326664684|ref|XP_700781.5| PREDICTED: matrix metalloproteinase-16 [Danio rerio]
Length = 589
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 54/211 (25%), Gaps = 55/211 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W I Y +T N + R A W V L FE
Sbjct: 93 LTGQKWQREHISYSIKNVTPKVG-------NQETHDAIRRAFDVWQGVTPLRFEAVPFRD 145
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 146 LDSGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 205
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G L A+HE+GHALGL H + D
Sbjct: 206 HDGNDLFLVAVHELGHALGLEHSSDPTAIMAPFYQYMD---------------------T 244
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
SF D+ +QKIYG P +
Sbjct: 245 ESFKLPH----DDLQGIQKIYGPPNKNPQPT 271
>gi|329851154|ref|ZP_08265911.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328840000|gb|EGF89572.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1502
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 65/369 (17%), Positives = 103/369 (27%), Gaps = 22/369 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ I D+G D + + T G D S S + + +
Sbjct: 1097 GQDTLYGGGDGDIYIVDNGNDVVSERTETGTDTGGFDTVRSSVSYLLTPFVEALVLTGGL 1156
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G++ + + GNS N S G D+ G SG D+ Y I +
Sbjct: 1157 DIDGWGNAQANYLTGNSGRNRLDGSGGVDIMSGGSGDDS--YEVDVAADHIVEAASGGTD 1214
Query: 328 YDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ VE L A I+ Q ++L L +G D +
Sbjct: 1215 DVRSLVSYSLPDYVENLVLAGGGAINGTGNAQDNVLTGNTGVNVLTGGLGNDTYFVQNTG 1274
Query: 387 YEF--GLSEGRDITFDSYLY--LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ EG D + S Y G Y + + G+ A + + + + +
Sbjct: 1275 DKVVEANGEGSDTIYASVSYNLTGRYIETLTLTGTAAINATGNSLGNALNGNSGNNVLD- 1333
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
A ++ L + VQ D G EG + F + Y +
Sbjct: 1334 --GGAGNDTLAGGGGNDTYYVQAAGDKVIELGG-EGTDIIFSTVTYNLN----------G 1380
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
R A H G L + L + AG D F
Sbjct: 1381 RYAETIHLTGAGSINATGNSLANTLIGNSGANVLNGLGGNDTLTGGAGADTFLFQASSRA 1440
Query: 563 -RSITFNPD 570
R FN
Sbjct: 1441 DRVTDFNAT 1449
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/258 (14%), Positives = 68/258 (26%), Gaps = 7/258 (2%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
+ + S + + D V + G + N + + + +
Sbjct: 1204 HIVEAASGGTDDVRSLVSYSLPDYVENLVLAGGGAINGTGNA--QDNVLTGNTGVNVLTG 1261
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV-GSSGNDVVIGN 283
G+D + G + S + N+T IE++ + GN
Sbjct: 1262 GLGNDTYFVQNTGDKVVEAN-GEGSDTIYASVSYNLT---GRYIETLTLTGTAAINATGN 1317
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
S N +SGN+V DG +G DT + Y + + +I F +
Sbjct: 1318 SLGNALNGNSGNNVLDGGAGNDTLAGGGGNDTYYVQAAGDKVIELGGEGTDIIFSTVTYN 1377
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
L + + LI G +V + G D
Sbjct: 1378 LNGRYAETIHLTGAGSINATGNSLANTLIGNSGANVLNGLGGNDTLTGGAGADTFLFQAS 1437
Query: 404 YLGSYDDLRNVFGSDRGA 421
N D
Sbjct: 1438 SRADRVTDFNATDGDLIN 1455
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/317 (15%), Positives = 89/317 (28%), Gaps = 24/317 (7%)
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
V E + V D + + A + +
Sbjct: 1199 DVAADHIVEAASGG----TDDVRSLVSYSLPDYVENLVLAGGGAINGTGNAQDNVLTGNT 1254
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
++ + LG N G V + + +D+ SV + G A
Sbjct: 1255 GVNVLTGGLGNDTYFVQNTGDKVVEANGE-GSDTIYASVSYNLTGRYIETLTLTGTAAIN 1313
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+ + A G+ GNN+ T+ GG+D + G +
Sbjct: 1314 ATGN-----SLGNALNGNSGNNV------LDGGAGNDTLAGGGGNDTYYVQAAGDKVIEL 1362
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIE-------SVVGSSGNDVVIGNSANNVFFESSGND 296
+ N+ I + G+S + +IGNS NV GND
Sbjct: 1363 -GGEGTDIIFSTVTYNLNGRYAETIHLTGAGSINATGNSLANTLIGNSGANVLNGLGGND 1421
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G +G DTF + A S ++ F +++ + + +
Sbjct: 1422 TLTGGAGADTFLFQASSRADRVTDFNATDGDLINVNAYTGGVANAGWVPQSGVNVVINFG 1481
Query: 357 KQRSILEYTASYEDLIQ 373
I AS D++
Sbjct: 1482 GGNVITVENASQADVLS 1498
>gi|332227957|ref|XP_003263157.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-15-like
[Nomascus leucogenys]
Length = 753
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 59/212 (27%), Gaps = 56/212 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + W+N+ + + T + + R A W + L F+E
Sbjct: 218 LTGRKWNNHHLTFSIQNYTEKLGWYHS-------MDAVRRAFRVWEQATPLVFQEVPYED 270
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+ +
Sbjct: 271 IRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSST 330
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
G L A+HE+GHALGL H + N + D +N
Sbjct: 331 DLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDN------------------ 372
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
F D+ +Q++YG P G
Sbjct: 373 ---FKLPE----DDLRGIQQLYGTPDGQPQPT 397
>gi|332706925|ref|ZP_08426985.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332354190|gb|EGJ33670.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 457
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 63/226 (27%), Gaps = 41/226 (18%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ I GG+D++ G N I + + G N +
Sbjct: 87 PDFLVGTNKNDLILGRGGNDIIIALGGNDLVFGEEGNDIVIAGSGNDFVSGGSGNDFVFG 146
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + + G SGND + G + N F SSGNDV DG G D+ Y +
Sbjct: 147 SSGNDILDGGSGNDSLFGGTGKNHFIGSSGNDVLDGEEGNDSVDYTGLGRAITLLPTG-- 204
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI----------------------- 361
+ + + QD L VE + ++++
Sbjct: 205 --IVNKSGLGQDTLIRVETIIGDAGQANTIDASSAGTGASVNVNLQQNSLQINVVNGPVL 262
Query: 362 ---------LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++ + +I + G D
Sbjct: 263 NRTVQNFVNVKGAGRNDTIIGDNNSNQLTGGAGSDNITGGGGNDTI 308
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 47/317 (14%), Positives = 87/317 (27%), Gaps = 40/317 (12%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
G + + I D G G + + + G G
Sbjct: 112 GGNDLVFGEEGNDIVIAGSGNDFVSGGSGNDFVFGSSGNDILDGGSGNDSLFGGTGKNHF 171
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
G + D DS+ G T + + I K LG +
Sbjct: 172 IGSSGNDVLD--------GEEGNDSVDYTGLGRAITLLPTGI--------VNKSGLGQDT 215
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDL--NTESWSSIGGYEKNMTIA 263
I D+G + +D + G + ++L N+ + + G N T+
Sbjct: 216 L--------IRVETIIGDAGQANTIDASSAGTGASVNVNLQQNSLQINVVNGPVLNRTVQ 267
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-------Y 316
+V G+ ND +IG++ +N +G+D G G DT P+
Sbjct: 268 NFV---NVKGAGRNDTIIGDNNSNQLTGGAGSDNITGGGGNDTIVGVDPNSKQPGINEID 324
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ A + ++ L D + ++ + L
Sbjct: 325 ILTGGAGADKFVMGDSKNPYYVGGGGFLGLNDYALLKDFQSGTDKIQLKSG---LNYTFA 381
Query: 377 QDVFESMKHFYEFGLSE 393
+ + F S
Sbjct: 382 SNFIAVNQGFSSSDKSL 398
>gi|218532859|ref|YP_002423675.1| hypothetical protein Mchl_4982 [Methylobacterium chloromethanicum
CM4]
gi|218525162|gb|ACK85747.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 137
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 13/85 (15%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F + Y+ + D+ AF P + H+ + G+ EGR + F+ + YL + D+
Sbjct: 32 GFDPIYYLYWYPDVR-AFPQGPLV------HYIHDGWREGRDPSAGFSGEGYLKANPDVR 84
Query: 581 NVFGSDRSAAAQHYITHGMKEGRAL 605
H++ G+ EGR
Sbjct: 85 ----ESGCNPLVHFVECGLAEGRKG 105
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHED 535
FD YL Y D+R HYI G +EGR+P F Y+ ++ D
Sbjct: 27 RTPLPGFDPIYYLYWYPDVRAF----PQGPLVHYIHDGWREGRDPSAGFSGEGYLKANPD 82
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ + P + HF G EGR
Sbjct: 83 VRES-GCNPLV------HFVECGLAEGR 103
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINA 455
FD YL Y D+R HYI G +EGR+P F Y+ ++ D+ +
Sbjct: 31 PGFDPIYYLYWYPDVRAF----PQGPLVHYIHDGWREGRDPSAGFSGEGYLKANPDVRES 86
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
+ HF G EGR
Sbjct: 87 GCNP-------LVHFVECGLAEGR 103
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 10/82 (12%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVF 415
+ Y Y D+ + H+ G EGRD + F YL + D+R
Sbjct: 32 GFDPIYYLYWYPDVRAF----PQGPLVHYIHDGWREGRDPSAGFSGEGYLKANPDVR--- 84
Query: 416 GSDRGAAARHYITHGVKEGRNP 437
H++ G+ EGR
Sbjct: 85 -ESGCNPLVHFVECGLAEGRKG 105
Score = 44.8 bits (104), Expect = 0.048, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
F+P YL Y D+ HYI G +EGR
Sbjct: 31 PGFDPIYYLYWYPDVRAFPQG----PLVHYIHDGWREGR 65
>gi|13937105|gb|AAK50051.1|AF363361_1 RTX toxin IA [Actinobacillus pleuropneumoniae]
Length = 1022
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 52/139 (37%), Gaps = 4/139 (2%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E ++GS+ D G+ ++F + G+D G+ G D + I+ + +
Sbjct: 716 VEEIIGSNRKDKFFGSRFTDIFHGAKGDDEIYGNDGHDILY--GDDGNDVIHGGDGNDHL 773
Query: 328 YDANEHKQ-DFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDVFESMKH 385
N + + L D + + Q ++L A + L G ++F+
Sbjct: 774 VGGNGNDRLIGGKGNNFLNGGDGDDELQVFECQYNVLLGGAGNDILYGSDGTNLFDGGVG 833
Query: 386 FYEFGLSEGRDITFDSYLY 404
+ G+DI S Y
Sbjct: 834 NDKIYGGLGKDIYRYSKEY 852
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 16/131 (12%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
S F + + GDD + G + I + I G + N + + ++G
Sbjct: 730 GSRFTDIFHGAKGDDEI----YGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGG 785
Query: 275 SGNDVVIGNSAN----------NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
GN+ + G + NV +GND+ GS G T + KIY
Sbjct: 786 KGNNFLNGGDGDDELQVFECQYNVLLGGAGNDILYGSDG--TNLFDGGVGNDKIYGGLGK 843
Query: 325 IIVYDANEHKQ 335
I + E+ +
Sbjct: 844 DIYRYSKEYGR 854
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 38/154 (24%), Gaps = 36/154 (23%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G I + I G + + + + + G GND ++G + N+ GN
Sbjct: 729 FGSRFTDIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGNDHLVGGNGNDRLIGGKGN 788
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+ +G G D E F Q +
Sbjct: 789 NFLNGGDGDD------------------------------------ELQVFECQYNVLLG 812
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
IL + +G D +
Sbjct: 813 GAGNDILYGSDGTNLFDGGVGNDKIYGGLGKDIY 846
Score = 42.9 bits (99), Expect = 0.16, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 42/150 (28%), Gaps = 8/150 (5%)
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D L VE + +++ + I +++ G D+ +G
Sbjct: 711 DELHSVEEIIGSNRKDKFFGSRFTDIFHGAKGDDEIYGNDGHDILYGDDGNDVIHGGDGN 770
Query: 396 D----ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
D + L G ++ N D + + G A + Y + +
Sbjct: 771 DHLVGGNGNDRLIGGKGNNFLNGGDGDDELQVFECQYNVLLGG----AGNDILYGSDGTN 826
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
L + + + E GR +
Sbjct: 827 LFDGGVGNDKIYGGLGKDIYRYSKEYGRHI 856
>gi|163741925|ref|ZP_02149314.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
2.10]
gi|161384646|gb|EDQ09026.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
2.10]
Length = 969
Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 79/552 (14%), Positives = 135/552 (24%), Gaps = 69/552 (12%)
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
++ F + ++ S+ + S +V G G + +
Sbjct: 67 NVYFVPDTWYTASGSASATTIPANSMSGTSGNDTISGDANDNVIYGGDGDDYLTGSSGDD 126
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
I G + + G YG D D +
Sbjct: 127 IIFGGEGSDNYDTDTGNDTFYGEGGD---DWVAIYDNMDGESLYGGETGETLGDMLEVYG 183
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D V G+ Q + Y GDD LD + N
Sbjct: 184 DYAGVDVN--VTFTGDGDGTVTFGGQTAYFWEFERFYLHSGDDTLDGSAATSAINVQ--T 239
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+S+ G + TI+ ++V G +G D + S ++V SSG D G +G D
Sbjct: 240 GGGDNSVTGGMGDDTISTGAGADTVDGGAGADSIDAGSGDDVVTGSSG-DTLVGGAGNDQ 298
Query: 307 FFYYA-------PSYLYKIYRFENAIIVYDANEHKQ----------------------DF 337
A PS + +A YD+N+ D
Sbjct: 299 ITINAASGGSVAPSGATVVSDGGSASGDYDSNDFAWNPGSSSSSSISMGGTPGTTGSDDV 358
Query: 338 LSDVERLRFADQ------------------------CIDSVNVKQRSILEYTASYEDLIQ 373
+ L D + + A+
Sbjct: 359 YDSITVLNTTDGAFLGVSQFDVGIDKVYLSEEPVSFTNTLASSGVSDFVVTYANGNTQSF 418
Query: 374 VIGQDVFESMKHFYEF-------GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
D ++ +F G + D+ D + G D+ +
Sbjct: 419 RFYNDGGAAISDPAQFFGTSVISGATLSGGEGDDTLTGGYGADSIDGGDGQDQIILQDGF 478
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ G +L+ + + + F E T S
Sbjct: 479 GNDTITGGEGGVDQDSLDLSQLSSGAVITMSGPEAGTVTVGSDTAQFSEIESITGTEKSD 538
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
GS + + G G + R LE A +DL D
Sbjct: 539 YIDGSAQSGNLAYVNSGGGDDTILGGSGNDDLRGGAGNDRLEGRAGTDDLRGGAGDDYLD 598
Query: 547 VQAGKDHFSNFG 558
+G D + + G
Sbjct: 599 GGSGGD-YIDAG 609
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/340 (13%), Positives = 86/340 (25%), Gaps = 29/340 (8%)
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ 220
+++ D + SD++ + + Y +
Sbjct: 5 YLVTLGDGTLDSGDGISANQSAFTSSDVIGTGSWTWSGQYQGDGQTYSNVTDTGTYHYGS 64
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
D I N S+ G N TI+ + G G+D +
Sbjct: 65 DGNVYFVPDTWYTASGSASATTIPAN-----SMSGTSGNDTISGDANDNVIYGGDGDDYL 119
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ----- 335
G+S +++ F G+D +D +G DTF+ IY + +Y +
Sbjct: 120 TGSSGDDIIFGGEGSDNYDTDTGNDTFYGEGGDDWVAIYDNMDGESLYGGETGETLGDML 179
Query: 336 -------DFLSDVERLRFADQCIDSVNVKQ----RSILEYTASYEDLIQVIGQDVFESMK 384
+V D + + + L
Sbjct: 180 EVYGDYAGVDVNVTFTGDGDGTVTFGGQTAYFWEFERFYLHSGDDTLDGSAATSAINVQT 239
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G D + + + D GA A + + L
Sbjct: 240 G--------GGDNSVTGGMGDDTISTGAGADTVDGGAGADSIDAGSGDDVVTGSSGDTLV 291
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
A ++ + A + G S+ G G + + D
Sbjct: 292 GGAGNDQITINAASGGSVAPSGATVVSDGGSASGDYDSND 331
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/215 (13%), Positives = 63/215 (29%), Gaps = 3/215 (1%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+ YG D+ D ++ D++ G + D+ +
Sbjct: 450 GDDTLTGGYGADSIDGGDGQDQIILQDGFGNDTITGGEGGVDQDSL--DLSQLSSGAVIT 507
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ I++I + D +D + G Y++ +I G
Sbjct: 508 MSGPEAGTVTVGSDTAQFSEIESITGTEKSDYIDGSAQSGNLAYVNSG-GGDDTILGGSG 566
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N + + + G +G D + G + ++ SG D D G DT ++
Sbjct: 567 NDDLRGGAGNDRLEGRAGTDDLRGGAGDDYLDGGSGGDYIDAGMGSDTVIGGTGDDTIQL 626
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
+ V + D + + + D
Sbjct: 627 TADADRDEVILEDGSGSDLIYNFDLGDSGDGTTVD 661
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 45/397 (11%), Positives = 87/397 (21%), Gaps = 55/397 (13%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI---LSHNALHEIGH 130
++ S + G S + D G + + G
Sbjct: 263 TVDGGAGADSIDAGSGDDVVTGSSGDTLVGGAGNDQITINAASGGSVAPSGATVVSDGGS 322
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
A G + + + T+ ++++ + G D+
Sbjct: 323 ASGDYDSNDFAWNPGSSSSSSISMGGTPGTTGSDDVYDSITVLNTTDGAFLGVSQFDV-- 380
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G K L S + + I + +
Sbjct: 381 -----GIDKVYLSEEPVSFTNTLASSGVSDFVVTYANGNTQSFRFYNDGGAAISDPAQFF 435
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN--VFFESSGNDVFDGSSGL---- 304
+ T++ +++ G G D + G + + + GND G G
Sbjct: 436 GT--SVISGATLSGGEGDDTLTGGYGADSIDGGDGQDQIILQDGFGNDTITGGEGGVDQD 493
Query: 305 ---------------------------DTFFYY-------APSYLYKIYRFENAIIVYDA 330
DT + Y ++ + Y
Sbjct: 494 SLDLSQLSSGAVITMSGPEAGTVTVGSDTAQFSEIESITGTEKSDYIDGSAQSGNLAYVN 553
Query: 331 NEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ D + S + LR L A + L G D ++
Sbjct: 554 SGGGDDTILGGSGNDDLRGGAGNDRLEGRAGTDDLRGGAGDDYLDGGSGGDYIDAGMGSD 613
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
G D + L + GSD
Sbjct: 614 TVIGGTGDDTIQLTADADRDEVILEDGSGSDLIYNFD 650
>gi|163797281|ref|ZP_02191234.1| hypothetical protein BAL199_10045 [alpha proteobacterium BAL199]
gi|159177372|gb|EDP61928.1| hypothetical protein BAL199_10045 [alpha proteobacterium BAL199]
Length = 371
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 63/201 (31%), Gaps = 10/201 (4%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDL-------TLIGGVKNYIDLNTESWSSIGGYE 257
+ P T+ G+D + +++ G + S+ G +
Sbjct: 96 TASEGADSIIGGPDDDTLVGGVGNDSITGGTGNGEDSIVAGDGKDTVRGGDGADSLFGGD 155
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
I + + + G SG D + G + ++ F GND G+ G D+ +
Sbjct: 156 GADLIYGNVGSDLLSGGSGTDTMFGGADSDTIFGGEGNDRMWGNLGADSLL--GEAGDDV 213
Query: 318 IYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
IY + + + F D + L D L ++ + L G
Sbjct: 214 IYGNLGNDTIIGGDGNDTMFAGQDNDSLLGGDGRDILYGNLGNDTLYGGSAPDMLYGGQG 273
Query: 377 QDVFESMKHFYEFGLSEGRDI 397
DV + + G D+
Sbjct: 274 NDVLSGGQGVDTLAGNRGNDL 294
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 57/196 (29%), Gaps = 15/196 (7%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGG-YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D + G + + + S GG +I ++V G G D + G ++ +
Sbjct: 102 DSIIGGPDDDTLVGGVGNDSITGGTGNGEDSIVAGDGKDTVRGGDGADSLFGGDGADLIY 161
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ G+D+ G SG DT F + I+ E ++ + L
Sbjct: 162 GNVGSDLLSGGSGTDTMF--GGADSDTIFGGEGNDRMWGN--------LGADSLLGEAGD 211
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD----SYLYLG 406
+ + + D + G D + LY G
Sbjct: 212 DVIYGNLGNDTIIGGDGNDTMFAGQDNDSLLGGDGRDILYGNLGNDTLYGGSAPDMLYGG 271
Query: 407 SYDDLRNVFGSDRGAA 422
+D+ + A
Sbjct: 272 QGNDVLSGGQGVDTLA 287
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 85/263 (32%), Gaps = 20/263 (7%)
Query: 63 SKVVDLTFEETSIHSD---IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
S + ++F ++ + +S D + + + G G+ +I
Sbjct: 74 SSTIGVSFTGANLTGTLLKVNLTASEGADSIIGGPDDDTLVGGVGNDSITGGTGNGEDSI 133
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
++ + + G +G +YG S D FG
Sbjct: 134 VAGDGKDTVRGGDGADSLFGGDGADLIYGNVGSDLL------------SGGSGTDTMFGG 181
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ + +++G G+ + + TI G+D + G
Sbjct: 182 ADSDTIFGGEGNDRMWG-NLGADSLLGEAGDDVIYGNLGNDTIIGGDGNDTM----FAGQ 236
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
N L + + G N T+ + + + G GNDV+ G + + GND+
Sbjct: 237 DNDSLLGGDGRDILYGNLGNDTLYGGSAPDMLYGGQGNDVLSGGQGVDTLAGNRGNDLMI 296
Query: 300 GSSGLDTFFYYAPSYLYKIYRFE 322
G +G D F+ +P I F+
Sbjct: 297 GGTGGDIFWMGSPDGADTISDFD 319
>gi|146386384|gb|ABQ23980.1| membrane-type 5 matrix metalloproteinase [Oryctolagus cuniculus]
Length = 198
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 48/161 (29%), Gaps = 30/161 (18%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 11 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 63
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + D+
Sbjct: 64 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNAN 123
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 124 HDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 164
>gi|291561206|emb|CBL40005.1| hypothetical protein CK3_01310 [butyrate-producing bacterium SS3/4]
Length = 192
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 55/157 (35%), Gaps = 6/157 (3%)
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
D D + +G H+ G +G D + S AA
Sbjct: 39 TDANGGHRDNKNKSGLGSYHYHCNGHPAHLHTNGVCPYAVGGQTDNSSAGNSSTAAAEAP 98
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITF 567
IT+ + + F Y ++ DL A A HF N G EGR F
Sbjct: 99 SITYDLMNSYS-RVFDPDYYYNTYPDLQTAIGTDKL---ALFTHFYNSGMAEGRKGCAEF 154
Query: 568 NPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA 604
+ ++Y + DL FGSD +HY+ G EGR
Sbjct: 155 DVNVYKENNTDLQTAFGSDLRKYYEHYMNTGWAEGRT 191
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D + + E ++S + Y +Y DL IG D HFY
Sbjct: 82 TDNSSAGNSSTAAAEAPSITYDLMNSYSRVFDPDYYYN-TYPDLQTAIGTDKLALFTHFY 140
Query: 388 EFGLSEGRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
G++EGR FD +Y + DL+ FGSD HY+ G EGR
Sbjct: 141 NSGMAEGRKGCAEFDVNVYKENNTDLQTAFGSDLRKYYEHYMNTGWAEGRT 191
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 40/119 (33%), Gaps = 4/119 (3%)
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
D + + L FD Y +Y DL+ G+D+ A
Sbjct: 76 YAVGGQTDNSSAGNSSTAAAEAPSITYDLMNSYSRVFDPDYYYNTYPDLQTAIGTDKLAL 135
Query: 423 ARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
H+ G+ EGR F Y ++ DL AF +H+ N G EGR
Sbjct: 136 FTHFYNSGMAEGRKGCAEFDVNVYKENNTDLQTAFGSDLRKY---YEHYMNTGWAEGRT 191
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGIS-GMQFKSVMNLSEKSRD 624
F+PD Y +Y DL G+D+ A H+ GM EGR + N ++
Sbjct: 111 VFDPDYYYNTYPDLQTAIGTDKLALFTHFYNSGMAEGRKGCAEFDVNVYKENNTDLQTAF 170
Query: 625 KADLSLSFDH--KKVD 638
+DL ++H
Sbjct: 171 GSDLRKYYEHYMNTGW 186
>gi|300868950|ref|ZP_07113554.1| hypothetical protein OSCI_3880007 [Oscillatoria sp. PCC 6506]
gi|300333017|emb|CBN58746.1| hypothetical protein OSCI_3880007 [Oscillatoria sp. PCC 6506]
Length = 1141
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 73/262 (27%), Gaps = 24/262 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + G+D L +G + L + I + I +
Sbjct: 862 DDLIFAGKDNDAVLGGNGNDTL----LGDLGTDTLLGGDGNDWITANFGDDFIEGGNGDD 917
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFE 322
+ G ND+++G + N+ SG+D G G D+ F A I+
Sbjct: 918 LIFGGKDNDIILGENGNDKLLGDSGDDTLIGGFGNDSATGNDGADFIDAGFGDDAIFGGN 977
Query: 323 NAIIV-------YDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ I+ + + + D L + L D L A + L
Sbjct: 978 DNDIIKGEDGNDFVSGDSGDDTLCGGGGSDILYGGDGDDVMDGCTDNDTLYGGAGNDLLT 1037
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D S GR+ L G +D F + +
Sbjct: 1038 GGGGNDFLSGDMGDDTLIGSTGRNT---FVLASGQGNDTIVDFEKGQDLIGLAGGLTFAQ 1094
Query: 433 EGRNPDAFKALEYIASHEDLIN 454
+ L +AS L+
Sbjct: 1095 LSITASNSETLISLASTGQLLA 1116
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 77/283 (27%), Gaps = 23/283 (8%)
Query: 204 NNIYK--IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGY 256
+NIY + I DDL+ + ++GG N L ++ G
Sbjct: 836 DNIYGENGNDFLLGNEGADFIDGGDNDDLIFAGKDNDAVLGGNGNDTLLGDLGTDTLLGG 895
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N I + + + G +G+D++ G N++ +GND G SG DT
Sbjct: 896 DGNDWITANFGDDFIEGGNGDDLIFGGKDNDIILGENGNDKLLGDSGDDTLI--GGFGND 953
Query: 317 KIYRFENAIIVYDANEHKQDFLSD-VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ A + F + + ++ D L + L
Sbjct: 954 SATGNDGADFIDAGFGDDAIFGGNDNDIIKGEDGNDFVSGDSGDDTLCGGGGSDILYGGD 1013
Query: 376 ---------GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
D G D D L G + A
Sbjct: 1014 GDDVMDGCTDNDTLYGGAGNDLLTGGGGNDFLSGDMGD----DTLIGSTGRNTFVLASGQ 1069
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ + L + L +++ L+ +
Sbjct: 1070 GNDTIVDFEKGQDLIGLAGGLTFAQLSITASNSETLISLASTG 1112
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 72/263 (27%), Gaps = 21/263 (7%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TL G + + +I G+ + T+ + +++ G +GND ++GN +
Sbjct: 799 DKTLSGTDFDDFLVGGSDSDAIAGFGGSDTLIGMSNNDNIYGENGNDFLLGNEGADFIDG 858
Query: 292 SSGNDVFD---------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+D+ G +G DT + + + + +
Sbjct: 859 GDNDDLIFAGKDNDAVLGGNGNDTLL--GDLGTDTLLGGDGNDWITANFGDDFIEGGNGD 916
Query: 343 RLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-- 399
L F + D + L + + LI G D G D F
Sbjct: 917 DLIFGGKDNDIILGENGNDKLLGDSGDDTLIGGFGNDSATGNDGADFIDAGFGDDAIFGG 976
Query: 400 --DSYLYLGSYDDLRNVFGSDRGAAARH-----YITHGVKEGRNPDAFKALEYIASHEDL 452
+ + +D + D Y G L A ++ L
Sbjct: 977 NDNDIIKGEDGNDFVSGDSGDDTLCGGGGSDILYGGDGDDVMDGCTDNDTLYGGAGNDLL 1036
Query: 453 INAFADAPDLVQVGKDHFSNFGC 475
+ +G D
Sbjct: 1037 TGGGGNDFLSGDMGDDTLIGSTG 1059
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/325 (14%), Positives = 87/325 (26%), Gaps = 31/325 (9%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
S + S F +D I N + G +
Sbjct: 801 TLSGTDFDDFLVGGSDSDAIAGFGGSDTLIGMSNNDNIYGENGNDFLLGNEGADFIDGGD 860
Query: 142 G---------------GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
G + D D+ L + ++ + D G ++
Sbjct: 861 NDDLIFAGKDNDAVLGGNGNDTLLGDLGTDTLLGGDGNDWITANFGDDFIEGGNGDDLIF 920
Query: 187 DIVAVQKIYGAPKGS-----LGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
I G G++ + I GDD + GG
Sbjct: 921 GGKDNDIILGENGNDKLLGDSGDDTLIGGFGNDSATGNDGADFIDAGFGDDAI----FGG 976
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
N I + + G + T+ + + G G+DV+ G + N+ + +GND+
Sbjct: 977 NDNDIIKGEDGNDFVSGDSGDDTLCGGGGSDILYGGDGDDVMDGCTDNDTLYGGAGNDLL 1036
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G G D F + A+ D + D E+ D + +
Sbjct: 1037 TGGGGND--FLSGDMGDDTLIGSTGRNTFVLASGQGNDTIVDFEK--GQDLIGLAGGLTF 1092
Query: 359 RSILEYTASYEDLIQVIGQDVFESM 383
+ ++ E LI + +
Sbjct: 1093 AQLSITASNSETLISLASTGQLLAT 1117
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/264 (15%), Positives = 78/264 (29%), Gaps = 35/264 (13%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + + + + +++ G G+D +IG S N+ + +GND G+ G D F
Sbjct: 801 TLSGTDFDDFLVGGSDSDAIAGFGGSDTLIGMSNNDNIYGENGNDFLLGNEGAD--FIDG 858
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
I+ ++ V N + + L + +
Sbjct: 859 GDNDDLIFAGKDNDAVLGGNGNDT-----------------LLGDLGTDTLLGGDGNDWI 901
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYL---YLGSYDDLRNVFGSDRGAAARHYIT 428
G D E + DI LG D + G +A +
Sbjct: 902 TANFGDDFIEGGNGDDLIFGGKDNDIILGENGNDKLLGDSGDDTLIGGFGNDSATGNDGA 961
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE----------G 478
+ G A+ ++ + + G D G +
Sbjct: 962 DFIDAGFGD---DAIFGGNDNDIIKGEDGNDFVSGDSGDDTLCGGGGSDILYGGDGDDVM 1018
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSD 502
T + LY G+ +DL G +
Sbjct: 1019 DGCTDNDTLYGGAGNDLLTGGGGN 1042
>gi|297683235|ref|XP_002819295.1| PREDICTED: matrix metalloproteinase-16-like, partial [Pongo abelii]
Length = 470
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 41/131 (31%), Gaps = 23/131 (17%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEETSIHS--------DIKFISSNN------------- 86
+P ++ R AL W V TFEE DI I ++
Sbjct: 7 DPETRKAIRRALDVWQNVTPPTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGG 66
Query: 87 --GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ P + D+ G L A+HE+GHALGL H
Sbjct: 67 FLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIM 126
Query: 145 PVYGVDNDYEN 155
+ + +N
Sbjct: 127 APFYQYMETDN 137
>gi|292619299|ref|XP_002663942.1| PREDICTED: matrix metalloproteinase-25-like [Danio rerio]
Length = 573
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 65/198 (32%), Gaps = 47/198 (23%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
W+ I + + T+++P + +AL WS V +L F S
Sbjct: 115 TTGLRWTKSDITWSVQNYPSVHKRLTPTQVDP----IISYALKAWSDVTNLNFYGASSSE 170
Query: 77 ---SDIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT 118
+DI+ + P +S + +FD ++W Y GT
Sbjct: 171 KDRADIRISFARSLHDDGYPFDGKGGTLAHAFFP-GESDVAGDTHFDDDEIWTYLDESGT 229
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
L A+HE GHALGL + S S+M + S+
Sbjct: 230 DLFAVAVHEFGHALGL-------------------SHSSSSPSIMKPYYQGSVGDVGSYI 270
Query: 179 YCATPMVSDIVAVQKIYG 196
D A+Q +YG
Sbjct: 271 LPD----DDREAIQSLYG 284
>gi|148241991|ref|YP_001227148.1| hypothetical protein SynRCC307_0892 [Synechococcus sp. RCC307]
gi|147850301|emb|CAK27795.1| Uncharacterized protein wiht hemolysin-type calcium-binding regions
[Synechococcus sp. RCC307]
Length = 789
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/285 (16%), Positives = 77/285 (27%), Gaps = 14/285 (4%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
D+ QTIY + LIG N + I + +
Sbjct: 423 TNADADEHQTIYGDREVGRYNDRLIGEDGNDRIYGGWGRDQVNSGWGGDRIYGGYDDDVL 482
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR----------F 321
G GND + G + ++ F SGNDV +G +G D A + Y +
Sbjct: 483 YGEEGNDQLYGEADDDRLFGGSGNDVLNGGTGADYMSGGAGNDTYYVDNENDIIDDRGLS 542
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ V + + +E + + L+ A + L G D
Sbjct: 543 SDVDTVVLQGAVRFTLGNGIESAVGNNANNTLNGNSSNNNLDGGAGNDSLQGASGNDQLI 602
Query: 382 SMKHFYEFGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
GRD + + L G DR + G +
Sbjct: 603 GGAGNDTLNGGSGRDTAVFHGQSNRINLNISGWQNTREGRDRLVSIESVNAGGGNDVVTG 662
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ S D + A + L+ G R V
Sbjct: 663 NRGNNTLSGQSGNDSLRGAAGSDYLLGGNGSDRLIGGSGNDRLVG 707
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 44/240 (18%), Positives = 76/240 (31%), Gaps = 10/240 (4%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S + AD G G T N I GL
Sbjct: 502 GGSGNDVLNGGTGADYMSGGAGNDTYYVDNENDIIDDR-GLSSDVDTVVLQGAVRFTLGN 560
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-----KGSLGNNIYK 208
+S + + + + +S + G + ++ G G G +
Sbjct: 561 GIESAVGNNANNTLNGNSSNNNLDGGAGNDSLQGASGNDQLIGGAGNDTLNGGSGRDTAV 620
Query: 209 IEVQQKDSPFIQTIYDSG--GDDLL--DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
Q + + + G D L ++ G N + +++ G N ++
Sbjct: 621 FHGQSNRINLNISGWQNTREGRDRLVSIESVNAGGGNDVVTGNRGNNTLSGQSGNDSLRG 680
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ ++G +G+D +IG S N+ SGND G SG DTF + +I F N
Sbjct: 681 AAGSDYLLGGNGSDRLIGGSGNDRLVGGSGNDRLVGGSGRDTFVLSEGAGYDRISDFRNG 740
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 63/293 (21%), Gaps = 22/293 (7%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
VIE++V ++ + + ND G G D +
Sbjct: 413 GGVVIENIVFTNADADEHQTIYGDREVGRY-NDRLIGEDGNDRIYGGWGRDQV----NSG 467
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ D L E L + + L G D
Sbjct: 468 WGGDRIYGGYDDDVLYGEE------GNDQLYGEADDDRLFGGSGNDVLNGGTGADYMSGG 521
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ + DI D D + G + +
Sbjct: 522 AGNDTYYVDNENDII-DDRGLSSDVDTVVLQGAVRFTLGNGIESAVGNNANNTLNGNSSN 580
Query: 444 E---YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
A ++ L A + + G D + + + + S N+ G
Sbjct: 581 NNLDGGAGNDSLQGASGNDQLIGGAGNDTLNGGSGRDT------AVFHGQSNRINLNISG 634
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
R + + + L + AG D+
Sbjct: 635 WQNTREGRDRLVSIESVN-AGGGNDVVTGNRGNNTLSGQSGNDSLRGAAGSDY 686
Score = 41.7 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 41/163 (25%), Gaps = 42/163 (25%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF--------------- 290
S+ G N + +++ G SG D + + +N
Sbjct: 585 GGAGNDSLQGASGNDQLIGGAGNDTLNGGSGRDTAVFHGQSNRINLNISGWQNTREGRDR 644
Query: 291 --------ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
GNDV G+ G +T S + + + N
Sbjct: 645 LVSIESVNAGGGNDVVTGNRGNNTL--SGQSGNDSLRGAAGSDYLLGGN----------- 691
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ L + + L+ G+D F +
Sbjct: 692 ------GSDRLIGGSGNDRLVGGSGNDRLVGGSGRDTFVLSEG 728
Score = 39.0 bits (89), Expect = 2.6, Method: Composition-based stats.
Identities = 32/281 (11%), Positives = 68/281 (24%), Gaps = 29/281 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKAD--------VWRYGIGKGTILSHNALH 126
+ + + ++ D + + +
Sbjct: 501 FGGSGNDVLNGGTGADYMSGGAGNDTYYVDNENDIIDDRGLSSDVDTVVLQGAVRFTLGN 560
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL----TSVMSYFMPQDSMMDASFGYCAT 182
I A+G + NG +D NDS + D++ S A
Sbjct: 561 GIESAVGNNANNTLNGNSSNNNLDGGAGNDSLQGASGNDQLIGGAGNDTLNGGSGRDTAV 620
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIG 237
I G G + + + G++ L + +L G
Sbjct: 621 FHGQSNRINLNISGWQNTREGRDRLVSIESVNAGGGNDVVTGNRGNNTLSGQSGNDSLRG 680
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN----------- 286
+ L + G N + + + +VG SG D + +
Sbjct: 681 AAGSDYLLGGNGSDRLIGGSGNDRLVGGSGNDRLVGGSGRDTFVLSEGAGYDRISDFRNG 740
Query: 287 -NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ +G D + + Y L + + +
Sbjct: 741 QDRIQVGAGVDNLRVQNRNGHAYVYEGRDLMAVVQGGAGDL 781
>gi|83645049|ref|YP_433484.1| cell wall biosynthesis glycosyltransferase [Hahella chejuensis KCTC
2396]
gi|83633092|gb|ABC29059.1| Glycosyltransferase involved in cell wall biogenesis [Hahella
chejuensis KCTC 2396]
Length = 1415
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 14/96 (14%)
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 537
R FDS YL +Y D+ + +HY+ G KE R P F + Y + D I
Sbjct: 272 RSPLFDSEWYLKNYPDVAEKGVN----PLKHYLAIGWKESRQPGPYFDSEYYRTRYPD-I 326
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDL 571
P + H+ G EGR F+ D
Sbjct: 327 AGLDMPPLV------HYWLHGCSEGRHPNSLFDMDW 356
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 13/82 (15%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWN 581
F + Y+ ++ D+ P H+ G++E R F+ + Y T Y D+
Sbjct: 276 FDSEWYLKNYPDVAEK-GVNPL------KHYLAIGWKESRQPGPYFDSEYYRTRYPDIAG 328
Query: 582 VFGSDRSAAAQHYITHGMKEGR 603
+ HY HG EGR
Sbjct: 329 L----DMPPLVHYWLHGCSEGR 346
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 34/98 (34%), Gaps = 14/98 (14%)
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIAS 448
R FDS YL +Y D+ +HY+ G KE R P F + Y
Sbjct: 267 YWKLMRSPLFDSEWYLKNYPDVA----EKGVNPLKHYLAIGWKESRQPGPYFDSEYYRTR 322
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FD 484
+ D+ H+ GC EGR FD
Sbjct: 323 YPDIAGLDMPP-------LVHYWLHGCSEGRHPNSLFD 353
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 14/102 (13%)
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FD 484
+ + + F + Y+ ++ D+ + H+ G +E R FD
Sbjct: 263 LLYWYWKLMRSPLFDSEWYLKNYPDVAEKGVNP-------LKHYLAIGWKESRQPGPYFD 315
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FK 525
S Y Y D+ G D HY HG EGR+P++ F
Sbjct: 316 SEYYRTRYPDIA---GLDM-PPLVHYWLHGCSEGRHPNSLFD 353
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
++ RS F+ + YL +Y D+ +HY+ G KE R G
Sbjct: 268 WKLMRSPLFDSEWYLKNYPDV----AEKGVNPLKHYLAIGWKESRQPGP 312
Score = 42.9 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 10/99 (10%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVF 415
Y +Y D + G + KH+ G E R FDS Y Y D+
Sbjct: 275 LFDSEWYLKNYPD-VAEKGVNPL---KHYLAIGWKESRQPGPYFDSEYYRTRYPDIA--- 327
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
G D HY HG EGR+P++ +++ E+L
Sbjct: 328 GLDMP-PLVHYWLHGCSEGRHPNSLFDMDWDRPEENLAP 365
>gi|73621169|sp|Q9EV34|LKTA8_PASHA RecName: Full=Leukotoxin; Short=Lkt
gi|11762022|gb|AAG40289.1|AF314505_1 leukotoxin [Mannheimia haemolytica]
Length = 953
Score = 69.8 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/331 (13%), Positives = 100/331 (30%), Gaps = 28/331 (8%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
AD L++ + T + F L P + R G++ + L
Sbjct: 507 ADKLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITKLNINRV 566
Query: 74 SI------HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F +N D+ + + + + G G + + E
Sbjct: 567 DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGTTE 626
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
I G G Y +D E + +V + + T +V +
Sbjct: 627 IDGGEGYDRVHYSRGNYGALTIDATKEIEQGSYTVNRF--VETGKALHEVTSTHTALVGN 684
Query: 188 IVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++ + + G Y + K ++ I + +D+ +
Sbjct: 685 REEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHNDIFKGSKFN--------- 729
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + TI + + + G G+D++ G + ++ GND+ G G D
Sbjct: 730 ----DAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKGDDI 785
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
F + I + + ++ + +D
Sbjct: 786 FVHRKGDGNDIITDSDGNDKLSFSDSNLKDL 816
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 61/260 (23%), Gaps = 50/260 (19%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I D DLT + I+L N+T + T I G+D V
Sbjct: 571 ITDGAASSTFDLTNVVQRIG-IEL---------DNAGNVTKTKETKI-IAKLGEGDDNVF 619
Query: 282 GNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYAPSYLYKIYRFE 322
S G D S G + F +
Sbjct: 620 VGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKEIEQGSYTVNRFVETGKALHEVTSTHT 679
Query: 323 N-------------AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + A + +D L VE + K +
Sbjct: 680 ALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVD 739
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D K G D ++ G +DL + D H
Sbjct: 740 TIDGNDGNDRLFGGKGDDILDGGNG-----DDFIDGGKGNDLLHGGKGDDI--FVHRKGD 792
Query: 430 GVKEGRNPDAFKALEYIASH 449
G + D L + S+
Sbjct: 793 GNDIITDSDGNDKLSFSDSN 812
>gi|149030869|gb|EDL85896.1| matrix metallopeptidase 24 [Rattus norvegicus]
Length = 514
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 50/148 (33%), Gaps = 32/148 (21%)
Query: 38 HRLSFDITELNPN-----AQEVARWALGEWSKVVDLTFEETSIH--------SDIKFISS 84
+ + DI P ++ R A W KV LTFEE H +DI +
Sbjct: 14 DQTTIDIHNYTPKVGELDTRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFA 73
Query: 85 NN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIG--KGTILSHNALHE 127
+ + P + +FD + W G G L A+HE
Sbjct: 74 SGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGNANHDGNDLFLVAVHE 131
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+GHALGL H + + + N
Sbjct: 132 LGHALGLEHSNDPSAIMAPFYQYMETHN 159
>gi|126463535|ref|YP_001044649.1| hemolysin-type calcium-binding region [Rhodobacter sphaeroides ATCC
17029]
gi|126105199|gb|ABN77877.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides ATCC
17029]
Length = 437
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 80/294 (27%), Gaps = 14/294 (4%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
D+ R G G + + G + G + G D D
Sbjct: 74 GNDQLFGNGGDDLVRGGGGADILTGGTGNDLLAGGAGNDNLHGGTGANLLIGGAGDDLLD 133
Query: 157 SFLTSVM-SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
S ++ + ++ A G D + G+ + +
Sbjct: 134 SRWSTDPDRGGLSFETWRAAKVGTGDEMHGGDGNDRIEASFGNDTLTGD---VGDDVIRG 190
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ G D L +G + E S+ G + + + ++G +
Sbjct: 191 QDGDDQLEGGEGQDTL----MGDAGVDVLSGGEGDDSLDGGLGDDRLDGGEGSDRLIGGN 246
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GNDV+ G +A +V F G+D G D L + ++ + +
Sbjct: 247 GNDVMDGGAARDVLFGGYGDDRITAGEGDDWVDGGGGDDLIDLGAGDDFVAAIEDLGRGD 306
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D + E + + ++ + L G D F
Sbjct: 307 DVIFGGE------GNDTMLGGRGCDQIDGGEGADVLNGGAGDDFLTGGAGADTF 354
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 50/351 (14%), Positives = 89/351 (25%), Gaps = 22/351 (6%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ E P+ + S G DLL + G + G N +
Sbjct: 25 TGLRFESALIAPPWGAPMMGSCGRDLLIASPYGSPLT----GGPEGDVLVGLWGNDQLFG 80
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + V G G D++ G + N++ +GND G +G + + + +
Sbjct: 81 NGGDDLVRGGGGADILTGGTGNDLLAGGAGNDNLHGGTGANLLI--GGAGDDLLDSRWST 138
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + V + +E + + L +G DV
Sbjct: 139 DPDRGGLSFETWRAAKV------GTGDEMHGGDGNDRIEASFGNDTLTGDVGDDVIRGQD 192
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ EG+D D L G D G + L
Sbjct: 193 GDDQLEGGEGQDTLMGDAGV----DVLSGGEGDDSLD-----GGLGDDRLDGGEGSDRLI 243
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
++ + A G D + ++ L D D G
Sbjct: 244 GGNGNDVMDGGAARDVLFGGYGDDRITAGEGDDWVDGGGGDDLIDLGAGDDFVAAIEDLG 303
Query: 505 AAARH-YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ G ++ + L D AG D F
Sbjct: 304 RGDDVIFGGEGNDTMLGGRGCDQIDGGEGADVLNGGAGDDFLTGGAGADTF 354
>gi|307826028|ref|ZP_07656241.1| Hemolysin-type calcium binding domain protein [Methylobacter
tundripaludum SV96]
gi|307732867|gb|EFO03731.1| Hemolysin-type calcium binding domain protein [Methylobacter
tundripaludum SV96]
Length = 1073
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 60/386 (15%), Positives = 102/386 (26%), Gaps = 44/386 (11%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G++ + S TI + G + V + I N
Sbjct: 195 AGDDDISGDANYVASDLNWTITTTNG-----VRQYSPVVGDMAPADAGADVIYAGAGNDY 249
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G GND+++G + N++ G+DV G +G DT+ + +
Sbjct: 250 VWAGQGNDVLFGEDGNDIIMGGAGNDIIGGQQGDDVLIGGTGKDTYLFNRGDGRDTVIDT 309
Query: 322 ----------------------------ENAIIVYDANEHKQDFL--SDVERLRFADQCI 351
N V+ D S V RFAD
Sbjct: 310 EKDSNLLFGEGISAGDITLRLGSLELDLGNGDQVHIDGFDPNDVFNSSSVSTFRFADGTE 369
Query: 352 DSVNVKQRSIL--EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
S+N + T+ + + D G DS D
Sbjct: 370 LSINQLLARGFDLDGTSGDDTITGTNTTDRIRGFDGNDTLSGGAGN----DSLDGGAGAD 425
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP-DLVQVGKD 468
L G D A T +G N + + + + L
Sbjct: 426 ILMGGAGDDTYLAVTGEDTLTDTQGHNTIQLAQANGVGAGGLKATHYGNQSQYLRVDIAL 485
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSY--DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
+ F D+ L + DL + G+ A + + +
Sbjct: 486 DNGETLKIQDAFYGTDATLLFANGHQLDLETLVGASLTTALNLQLDNSGGKLYGGAGNDR 545
Query: 527 LEYIASHEDLINAFADAPDLVQAGKD 552
L + + L A+ D AG D
Sbjct: 546 LYGGSGGDRLSGAWGDDTLSGGAGND 571
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 66/241 (27%), Gaps = 7/241 (2%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ N I I + + GND++ + + F +GNDV G + D
Sbjct: 72 DTLYDSPGNDRILSGNDIVTALRG-GNDLIEAGAGQDKFNGGAGNDVIIGCADNDILAGG 130
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A + A + E L + ++ +
Sbjct: 131 ANDDRLYADAPISVADAIAAGNSQTGSGQKGEWLAGESGDDTLIGGVGNDVITGGGGNDL 190
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
LI G D ++ L+ T Y D+ A +
Sbjct: 191 LIGGAGDDDISGDANYVASDLNWTITTTNGVRQYSPVVGDMAPADAGADVIYAGAGNDYV 250
Query: 431 VKEGRNPDAF-----KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
N F + A ++ + D + GKD + F +GR D+
Sbjct: 251 WAGQGNDVLFGEDGNDIIMGGAGNDIIGGQQGDDVLIGGTGKDTYL-FNRGDGRDTVIDT 309
Query: 486 Y 486
Sbjct: 310 E 310
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 41/344 (11%), Positives = 84/344 (24%), Gaps = 49/344 (14%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
F T + FD D G G ++ + G
Sbjct: 380 FDLDGTSGDDTITGTNTTDRIRGFDGNDTLSGGAGNDSLDGGAGADILMGGAG----DDT 435
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
D + + + + + + +G + + DI +
Sbjct: 436 YLAVTGEDTLTDTQGHNTIQLAQANGVGAGGLKATHYGNQSQYLRVDIALDNGETLKIQD 495
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ + ++T+ + L+L L + G N
Sbjct: 496 AFYGTDATLLFANGHQLDLETLVGASLTTALNLQLDNSGGK-----------LYGGAGND 544
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + + + G+ G+D + G + N+ + D+ G +G D + A S I
Sbjct: 545 RLYGGSGGDRLSGAWGDDTLSGGAGNDTLIGGADRDLLLGGAGNDIYELSATSGADLITD 604
Query: 321 FENAIIVYDANEHKQDFLS-----------------DVER-----------LRFADQCID 352
E I+ A + L+ VE FAD
Sbjct: 605 TEGDNIIRFAADISAANLTVSTLTMAGQPALRMKVNGVEDATITSGVDHYSFEFADGSRM 664
Query: 353 SVNVKQRS------ILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + + + + L D
Sbjct: 665 TSAEFLLNFRAEPQTVYGNDTGDTLYGGQAADTLYGQGGNDSLW 708
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/363 (14%), Positives = 87/363 (23%), Gaps = 66/363 (18%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+ DV G I+ IG G G
Sbjct: 236 AGADVIYAGAGNDYVWAGQGNDVLFGEDGNDIIMGGAGNDIIGGQQGDDVLIGGTGKDTY 295
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
D D+ + + +DS + G A + + +++ G G+ +
Sbjct: 296 LFNRGD-GRDTVIDT------EKDSNLLFGEGISAGDITLRLGSLELDLG-----NGDQV 343
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ D ++ D +L++ + DL G + TI
Sbjct: 344 HIDGFDPNDVFNSSSVSTFRFADGTELSINQLLARGFDL--------DGTSGDDTITGTN 395
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G GND + G + N+ +G D+ G +G DT+ + N I
Sbjct: 396 TTDRIRGFDGNDTLSGGAGNDSLDGGAGADILMGGAGDDTYLAVTGEDTLTDTQGHNTIQ 455
Query: 327 VYDANEHKQDFLSDVE------------------------RLRFADQCIDSVNVKQRSI- 361
+ AN L D + N Q +
Sbjct: 456 LAQANGVGAGGLKATHYGNQSQYLRVDIALDNGETLKIQDAFYGTDATLLFANGHQLDLE 515
Query: 362 ---------------------LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
L A + L G D G D
Sbjct: 516 TLVGASLTTALNLQLDNSGGKLYGGAGNDRLYGGSGGDRLSGAWGDDTLSGGAGNDTLIG 575
Query: 401 SYL 403
Sbjct: 576 GAD 578
Score = 41.3 bits (95), Expect = 0.56, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 32/78 (41%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G+ D+++ + +++ + GND G +G DT+ +++ E
Sbjct: 823 GSAGNDPLSGTDYRDIILAGAGDDLLIGNGGNDDLHGETGTDTYRLSRGGGADQVFEVEG 882
Query: 324 AIIVYDANEHKQDFLSDV 341
+ + + + L+
Sbjct: 883 ETSMIEVSAYNLSRLTGT 900
Score = 40.5 bits (93), Expect = 0.85, Method: Composition-based stats.
Identities = 29/244 (11%), Positives = 53/244 (21%), Gaps = 13/244 (5%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++ E + D + + + + GQD F DI
Sbjct: 68 ANREDTLYDSPGNDRILSGNDIVTALRGGNDLIEAGAGQDKFNGGAGNDVIIGCADNDIL 127
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
Y D A + E ++ D+I
Sbjct: 128 AGGANDDRLYADAPISVADAIAAGNSQTGSGQKGEWLAGESGDDTLIGGVGNDVITGGGG 187
Query: 459 APDLVQVGKDH-------FSNFGCEEGRFVTFDSYLYLGSYDDLRNV-----FGSDRGAA 506
L+ D + T Y D+
Sbjct: 188 NDLLIGGAGDDDISGDANYVASDLNWTITTTNGVRQYSPVVGDMAPADAGADVIYAGAGN 247
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ G D + A ++ + D + GKD + F +GR
Sbjct: 248 DYVWAGQGNDVLFGEDGNDIIMGGAGNDIIGGQQGDDVLIGGTGKDTYL-FNRGDGRDTV 306
Query: 567 FNPD 570
+ +
Sbjct: 307 IDTE 310
>gi|9105546|gb|AAF83478.1|AE003910_14 hemolysin-type calcium binding protein [Xylella fastidiosa 9a5c]
Length = 1208
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/298 (14%), Positives = 87/298 (29%), Gaps = 81/298 (27%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES- 270
+ S I+ G ++L GG + + + ++ G + N T+ ++
Sbjct: 642 SAEGSTAADLIFGDAGANIL----RGGAGDDVLSGGDGDDTLYGGDGNDTLYGDAGNDTL 697
Query: 271 --------------------------VVGSSGNDVVIGN--SANNVFFESSGNDVFDGSS 302
+ G +G+DV+ + SA+NV +G+D GS+
Sbjct: 698 YGGGGNDLLLGGDGDDVLDGGEGSNRLEGGAGDDVLKVSYWSADNVLIGGTGDDTLYGSA 757
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDAN--------------------EHKQDFLS--- 339
DT+ + I + + D +
Sbjct: 758 FADTYLFNQGDGHDTIIEQGGTDKLVFGEGIVAADVRLLRQGQDVVLDLGNGHDSIRLKD 817
Query: 340 ------------DVERLRFADQC-----------IDSVNVKQRSILEYTASYEDLIQVIG 376
D+E++ FAD + ++ L+ + L+ G
Sbjct: 818 WLTSNGTRNHSADIEQIVFADGTLWTPETLSSMGLTTLGTSGNDTLKGWQGKDILLGGAG 877
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
DV + + G D+ Y + + L G D + T+ +G
Sbjct: 878 DDVLDGGEGSNRLEGGAGNDVLK--VSYWSADNVLIGGTGDDTLYGSAFADTYLFNQG 933
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 45/365 (12%), Positives = 94/365 (25%), Gaps = 67/365 (18%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + T + + D DV G G + L +
Sbjct: 680 YGGDGNDTLYGDAGNDTLYGGGGNDLLLGGDGDDVLDGGEGSNRLEGGAGDDV----LKV 735
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA---- 190
+ + N G D Y + T + + D++++ + A
Sbjct: 736 SYWSADNVLIGGTGDDTLYGSAFADTYLFNQGDGHDTIIEQGGTDKLVFGEGIVAADVRL 795
Query: 191 --------VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+ G L + + + + Q ++ G L
Sbjct: 796 LRQGQDVVLDLGNGHDSIRLKDWLTSNGTRNHSADIEQIVFADG---TLWTPETLSSMGL 852
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA-----------NNVFFE 291
L T ++ G++ + + + G G++ + G + +NV
Sbjct: 853 TTLGTSGNDTLKGWQGKDILLGGAGDDVLDGGEGSNRLEGGAGNDVLKVSYWSADNVLIG 912
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-------------------- 331
+G+D GS+ DT+ + I +
Sbjct: 913 GTGDDTLYGSAFADTYLFNQGDGHDTIIEQGGTDKLVFGEGILAADVRLLREGQDVVLDL 972
Query: 332 EHKQDFLS---------------DVERLRFADQCI--DSVNVKQRSILEYTASYEDLIQV 374
+ D + D+E++ FAD + T + L
Sbjct: 973 GNGHDSIRLKDWLTSNGTRNHSADIEQIVFADGTLWTPETLSSMGLTTLGTPGNDTLKGW 1032
Query: 375 IGQDV 379
G+D+
Sbjct: 1033 QGKDI 1037
Score = 45.2 bits (105), Expect = 0.038, Method: Composition-based stats.
Identities = 37/277 (13%), Positives = 66/277 (23%), Gaps = 28/277 (10%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
I G +L + + TI + GG D L + L
Sbjct: 906 ADNVLIGGTGDDTLYGSAFADTYLFNQGDGHDTIIEQGGTDKLVFGEGILAADVRLLREG 965
Query: 249 SWSSIGGYEKNMTI------------AQHTVIESVV---GSSGNDVVIGNSANNVFFESS 293
+ + +I IE +V G+ + + +
Sbjct: 966 QDVVLDLGNGHDSIRLKDWLTSNGTRNHSADIEQIVFADGTLWTPETLSSMGLTTL-GTP 1024
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
GND G G D + N + D L + +
Sbjct: 1025 GNDTLKGWQGKDILLGGDGDDVLDGGEGSNRLE----GGAGNDVLK----VSYWSADNVL 1076
Query: 354 VNVKQRSILEYTASYED--LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ L +A + + G D + EG + + S DDL
Sbjct: 1077 IGGTGDDTLYGSAFADTYLFNKGDGHDTIIEQSGTDKLVFGEG--LHQKEARFTRSGDDL 1134
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+F +G F+ ++
Sbjct: 1135 SLLFNGSEDQVTIAGWFNGSGHQVESLVFQDGTVLSG 1171
Score = 44.0 bits (102), Expect = 0.078, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 84/303 (27%), Gaps = 29/303 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + +V G G T+ G
Sbjct: 875 GAGDDVLDGGEGSNRLEGGAGNDVLKVSYWSADNVLIGGTGDDTLYGSAFADTYLFNQGD 934
Query: 135 MHPGSYNGGYPVYGVDNDYENDS-------FLTSVMSYFMPQDSMMDASFGYCATPM--V 185
H G V + + V+ DS+ +
Sbjct: 935 GHDTIIEQGGTDKLVFGEGILAADVRLLREGQDVVLDLGNGHDSIRLKDWLTSNGTRNHS 994
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+DI + G + + + +P T+ G D+L V +
Sbjct: 995 ADIEQIVFADG--TLWTPETLSSMGLTTLGTPGNDTLKGWQGKDILLGGDGDDVLDG--- 1049
Query: 246 NTESWSSIGGYEKNMTI--AQHTVIESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGS 301
E + + G N + + + ++G +G+D + G++ + F + G+D
Sbjct: 1050 -GEGSNRLEGGAGNDVLKVSYWSADNVLIGGTGDDTLYGSAFADTYLFNKGDGHDTIIEQ 1108
Query: 302 SGLDTFFYYAPSYL--YKIYRFENAIIVYDANEHKQDFLSD--------VERLRFADQCI 351
SG D + + + R + + + Q ++ VE L F D +
Sbjct: 1109 SGTDKLVFGEGLHQKEARFTRSGDDLSLLFNGSEDQVTIAGWFNGSGHQVESLVFQDGTV 1168
Query: 352 DSV 354
S
Sbjct: 1169 LSG 1171
>gi|83942291|ref|ZP_00954752.1| type I secretion target repeat protein [Sulfitobacter sp. EE-36]
gi|83846384|gb|EAP84260.1| type I secretion target repeat protein [Sulfitobacter sp. EE-36]
Length = 1896
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/410 (12%), Positives = 91/410 (22%), Gaps = 11/410 (2%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T S + AD G G I + G N +
Sbjct: 1229 NDTIYGGSGNDTITDVQGADEIYGGDGDDLIEAGIDTFSDYANDQPTVGGRPNPFFNSGD 1288
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ D D + + D +G ++ + +YG +
Sbjct: 1289 PNKDDGRDFVDGGSGNDTIRTGDDSDTIYGGTGDDSINAGIDDDLVYGDDGDDSIIGSHG 1348
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
TIY G++ + V I G N +
Sbjct: 1349 -SDSLYGGEGNDTIYGGFGNEPIAGYEGEEVDATDPQPNNGKDYIEGGAGNDVLYGEDDN 1407
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-----YKIYRFEN 323
++++G + +D + G ++ GND G G DT
Sbjct: 1408 DTILGGADDDYIDGGIDDDSLDGGQGNDTILGGQGNDTIRGAQGHDEIDGGDGDDSILAG 1467
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK---QRSILEYTASYEDLIQVIGQDVF 380
D + + D ++ + A + +I D
Sbjct: 1468 NGDDDVKGGAGNDTIDGGQGHDTIDGGDGDDSILGGFGDDSILGGAGNDTIIAAGDNDTV 1527
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ G DI F N G D
Sbjct: 1528 DGGTGDDSISGVRGDDILFGGEGDDTIDGGEDNDSIDGGDGDDSLLGGFGDDTIEGGDGD 1587
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHF--SNFGCEEGRFVTFDSYLY 488
+ + + + G+D F N G D+ Y
Sbjct: 1588 DTISAGGGDDIISGGAGNDSLHGNDGRDTFTNVNGGDTIDGGAGTDASDY 1637
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/501 (10%), Positives = 115/501 (22%), Gaps = 45/501 (8%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + + G T D G G +++ + +G
Sbjct: 1109 TGDGNDVVNAGGGDDTIDGQGGNDTIDGGKYDDSLIGGDGNDSLVGGEGDDVL---IGNK 1165
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
V V ++ D+ + I
Sbjct: 1166 PGAIGVPDTDVPLVSTPFDQDTNPND----DKDTLIGGAGNDTIDGGDDADYIDGGDDDD 1221
Query: 196 GAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTE 248
G + IY D IY GDDL+ + + +
Sbjct: 1222 VIEGGIDNDTIYGGSGNDTITDVQGADEIYGGDGDDLIEAGIDTFSDYANDQPTVGGRPN 1281
Query: 249 SWSSIGG---YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G + + + +++ +D + G + ++ +D+ G G D
Sbjct: 1282 PFFNSGDPNKDDGRDFVDGGSGNDTIRTGDDSDTIYGGTGDDSINAGIDDDLVYGDDGDD 1341
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV-----NVKQRS 360
+ +Y E +Y ++ + E + D ++
Sbjct: 1342 SII--GSHGSDSLYGGEGNDTIYGGFGNEPIAGYEGEEVDATDPQPNNGKDYIEGGAGND 1399
Query: 361 ILEYTASYEDLIQVIGQDV---------FESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+L + ++ D + + +G D + +
Sbjct: 1400 VLYGEDDNDTILGGADDDYIDGGIDDDSLDGGQGNDTILGGQGNDTIRGAQGHDEIDGGD 1459
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ G ++ + ++ F D L G D
Sbjct: 1460 GDDSILAGNGDDDVKGGAGNDTIDGGQGHDTIDGGDGDDSILGGFGDDSILGGAGNDTII 1519
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
G + G D G G + +++
Sbjct: 1520 AAGDNDTVDGGTGDDSISGVRGDDILFGGE------------GDDTIDGGEDNDSIDGGD 1567
Query: 532 SHEDLINAFADAPDLVQAGKD 552
+ L+ F D G D
Sbjct: 1568 GDDSLLGGFGDDTIEGGDGDD 1588
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/368 (13%), Positives = 94/368 (25%), Gaps = 25/368 (6%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
G+ ++G D DS L + T V + + + G
Sbjct: 993 DGTDGINDTIFGNGGDDTIDSGL------GDDTVDGGAGDDTFTLTDGVDNDIIIGGESG 1046
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT----LIGGVKNYIDLNTESWSS 252
G + ++ + + + G + + L G + + +
Sbjct: 1047 ETDGDVIDSTAVNDDLTVTFTDKEEGTLTNGSGTTEFSEIERLELGGGDDTVTGSGGDEN 1106
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + N + +++ G GND + G ++ GND G G D P
Sbjct: 1107 VMTGDGNDVVNAGGGDDTIDGQGGNDTIDGGKYDDSLIGGDGNDSLVGGEGDDVLIGNKP 1166
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + QD + D + ++ + +
Sbjct: 1167 GA----IGVPDTDVPLVSTPFDQDTNPN-------DDKDTLIGGAGNDTIDGGDDADYID 1215
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFD----SYLYLGSYDDLRNVFGSDRGAAARHYIT 428
DV E G D D +Y G DDL A T
Sbjct: 1216 GGDDDDVIEGGIDNDTIYGGSGNDTITDVQGADEIYGGDGDDLIEAGIDTFSDYANDQPT 1275
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G + ++ + + D + G + D +Y
Sbjct: 1276 VGGRPNPFFNSGDPNKDDGRDFVDGGSGNDTIRTGDDSDTIYGGTGDDSINAGIDDDLVY 1335
Query: 489 LGSYDDLR 496
DD
Sbjct: 1336 GDDGDDSI 1343
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 63/196 (32%), Gaps = 10/196 (5%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+ N V + ++D + S + + + +D + Y ++ + + + G
Sbjct: 420 SFTINENSAPVAVGINDDDDKLNDNDNSQTLAKTTKLDGNTEYAGDKIIPEYSYIVRPEG 479
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID----------LN 246
A S +Y + D+ T D I+ +
Sbjct: 480 AVDSSQDVTVYVVNFDGNDAVGFVTDKPLEVGKSYDFVSHNSNLPSINYDHIAKTYTVTD 539
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + G + + +++ G GND + GN+ ++ + G+D G +G DT
Sbjct: 540 DSTSPTDGTVGGDDVLTGGNGNDTIFGEGGNDSIEGNAGHDSIEGNHGDDTISGGTGNDT 599
Query: 307 FFYYAPSYLYKIYRFE 322
+ +
Sbjct: 600 IYGDNNTGGASTPGGT 615
Score = 41.3 bits (95), Expect = 0.60, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 64/199 (32%), Gaps = 10/199 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ TI +G +D +D ++ G + I E +I G E N +I
Sbjct: 1504 FGDDSILGGAGNDTIIAAGDNDTVDGGTGDDSISGVRGDDILFGGEGDDTIDGGEDNDSI 1563
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+S++G G+D + G ++ G+D+ G +G D+ +
Sbjct: 1564 DGGDGDDSLLGGFGDDTIEGGDGDDTISAGGGDDIISGGAGNDSL--HGNDGRDTFTNVN 1621
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ SD + + + ++ + + + D +
Sbjct: 1622 GGDTIDGGAGTD---ASDYDVIDLRGALSPGGGYRLENVTPDNDAGDTIDGDSPNDGIDG 1678
Query: 383 MKHFYEFGLSEGRDITFDS 401
F + +E + F +
Sbjct: 1679 TIVFTDADGTETGRLDFTN 1697
Score = 40.9 bits (94), Expect = 0.65, Method: Composition-based stats.
Identities = 64/494 (12%), Positives = 127/494 (25%), Gaps = 27/494 (5%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ +S+ + +S + + I S + +G
Sbjct: 679 ITGDGQATNANSSLASLANQDGESATYRLDFSKDVTNISFRINDIDNASKVVIVAVG-PD 737
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G P + + G + + D + T + D+ S + D + +
Sbjct: 738 GARTPINVSTGGGIQAQNQDGVGGN-ETLISRGADGPDTDPSHSALVNIS-GPVDYLEIT 795
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ N I + D G + L + G +
Sbjct: 796 HT--MDQSLSPGNHAGINITDVYFDAPVGGVDGGAGNDLLMGDDGDDFID---GGAGDDT 850
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + T+ + + G G D + G + + F + D DG +G
Sbjct: 851 LFGGDDDDTLIGGDGDDQLTGGEGKDNISGGAGKDTIFGGTDGDTVDGGAGGFNADPALN 910
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI----------- 361
+ + + D + + D + + K I
Sbjct: 911 TDDDTLDLTGLNFRLRDLEPDSNGNGQNGTVDLYNDDGTSAGSFKFTEIENIIGEEMAGP 970
Query: 362 LEYTASYEDLIQVIGQ---DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
++ S ED+ D + + G D T DS L + D
Sbjct: 971 VDGLDSGEDMAPGYTDAQGDQIDGTDGINDTIFGNGGDDTIDSGLGDDTVDGGAGDDTFT 1030
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ I G + G ++ A ++DL F D + + F E
Sbjct: 1031 LTDGVDNDIIIGGESGETDG--DVIDSTAVNDDLTVTFTDKEEGTLTNGSGTTEFSEIER 1088
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
+ GS D + G G ++ + LI
Sbjct: 1089 LELGGGDDTVTGSGGDENVMTGDGNDVVNA---GGGDDTIDGQGGNDTIDGGKYDDSLIG 1145
Query: 539 AFADAPDLVQAGKD 552
+ + G D
Sbjct: 1146 GDGNDSLVGGEGDD 1159
>gi|332705378|ref|ZP_08425456.1| hypothetical protein LYNGBM3L_07500 [Lyngbya majuscula 3L]
gi|332355738|gb|EGJ35200.1| hypothetical protein LYNGBM3L_07500 [Lyngbya majuscula 3L]
Length = 943
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 61/183 (33%), Gaps = 9/183 (4%)
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQK 214
NDS +T +++ + D + + AT ++ ++ G L N +
Sbjct: 723 NDSQITQFLAFGLDLDHIQSPTAIVEATSEINGTQGADQLIGTIDADLING-FGGNDTIA 781
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ ++ GDD+L D I G + I +S+ G
Sbjct: 782 GALGNDILFGGNGDDILRGDNNSRSP---DGKAGGDDIIYGGSGSDRIGGKFGNDSLYGG 838
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDG-----SSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
G+D + G++ +++ GND G SG DTF I FE
Sbjct: 839 FGDDQLWGDAGDDLLSGGLGNDTLTGDNFSNGSGSDTFVLEIGEGTDTITDFELGTDFIG 898
Query: 330 ANE 332
Sbjct: 899 LGN 901
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 41/180 (22%), Gaps = 18/180 (10%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+ G D +IG ++ GND G+ G D F + + N+
Sbjct: 753 INGTQGADQLIGTIDADLINGFGGNDTIAGALGNDILF--GGNGDDILRGDNNS-----R 805
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + A + + L G D
Sbjct: 806 SPDGK-----------AGGDDIIYGGSGSDRIGGKFGNDSLYGGFGDDQLWGDAGDDLLS 854
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G D GS D + + + G I S
Sbjct: 855 GGLGNDTLTGDNFSNGSGSDTFVLEIGEGTDTITDFELGTDFIGLGNGLSFGEVSITSDS 914
>gi|149203810|ref|ZP_01880779.1| Hemolysin-type calcium-binding protein [Roseovarius sp. TM1035]
gi|149142927|gb|EDM30969.1| Hemolysin-type calcium-binding protein [Roseovarius sp. TM1035]
Length = 834
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/381 (14%), Positives = 104/381 (27%), Gaps = 20/381 (5%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
D+ + AD G G IL + GL G G
Sbjct: 404 ANLFHGDAGNDTLFGGNGADTLHGGDGDDYILPLLGDDVVHGGAGLDTYSMSVGNGGFEG 463
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
D L + M F + + + + G+LG + +
Sbjct: 464 SDVSRSFGDKLIVDTGGILEFAPWMSVDFNTNLLERLGNDLVI--------GTLGQSSIR 515
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + + D + +D + + E +I G + + T+A
Sbjct: 516 LVDFYSNPTGWISTSDDSRE--IDFARAATLSDSSPEVPEGGDTITGGDTDDTLAGDAGN 573
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G +GND + + ++V SGND G
Sbjct: 574 DTIDGGAGNDRISASDGDDVVLGGSGNDNIGGG----VGNDTIDGGDGDDVMGAGFGDDS 629
Query: 329 DANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ D L + + L D +++ + +D+ G+D +
Sbjct: 630 VSGGLGNDVLAGGAGNDTLSGGDGNDSMSGSFGNDLIDAGSGADDIGGGTGRDAINAGAG 689
Query: 386 FYEFGLSEGRDIT---FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G EG D + G D G+ + G + D F
Sbjct: 690 NDRVGGGEGDDTISGGNGNDFLAGGGRDDIIDGGTGNDTINGGAGNDVMTGGADADQFVF 749
Query: 443 LEYIASHEDLINAFADAPDLV 463
+ D+I F D D
Sbjct: 750 SAFFDGEADVITDFEDGLDSF 770
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 56/412 (13%), Positives = 104/412 (25%), Gaps = 21/412 (5%)
Query: 62 WSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI-------NFDKADVWRYGI 114
+S V +L F + N Y + + D + +
Sbjct: 400 YSDVANL-FH--GDAGNDTLFGGNGADTLHGGDGDDYILPLLGDDVVHGGAGLDTYSMSV 456
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G G + G L + G + N + ++ + Q S+
Sbjct: 457 GNGGFEGSDVSRSFGDKLIVDTGGILEFAPWMSVDFNTNLLERLGNDLVIGTLGQSSIRL 516
Query: 175 ASFGYCAT---PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
F T D + A + + T+ G+D +
Sbjct: 517 VDFYSNPTGWISTSDDSREIDFARAATLSDSSPEVPEGGDTITGGDTDDTLAGDAGNDTI 576
Query: 232 DL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + + + L +IGG N TI + + G+D V G N
Sbjct: 577 DGGAGNDRISASDGDDVVLGGSGNDNIGGGVGNDTIDGGDGDDVMGAGFGDDSVSGGLGN 636
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLR 345
+V +GND G G D+ I A + + + +R+
Sbjct: 637 DVLAGGAGNDTLSGGDGNDSM--SGSFGNDLIDAGSGADDIGGGTGRDAINAGAGNDRVG 694
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ L + + G D D S +
Sbjct: 695 GGEGDDTISGGNGNDFLAGGGRDDIIDGGTGNDTINGGAGNDVMTGGADADQFVFSAFFD 754
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
G D + + R + E + ++A+ + A
Sbjct: 755 GEADVITDFEDGLDSFFIRRFDPDTGVENISNGGNGLAGFVAAMNIVDVAGG 806
>gi|331284141|ref|NP_001193569.1| macrophage metalloelastase [Bos taurus]
gi|296480368|gb|DAA22483.1| matrix metallopeptidase 12-like [Bos taurus]
Length = 471
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/193 (21%), Positives = 63/193 (32%), Gaps = 47/193 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSD---I 79
W I Y+ + T D+ + + A WS V L F + + I
Sbjct: 110 WKKRLITYRINNYTPDLKPEDVD-------DAFQKAFQVWSDVTPLKFRKVHDNEADIMI 162
Query: 80 KFISSNNGYVCTPRY-----------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+F +G + + + +FD+A+ W G KG L A+HEI
Sbjct: 163 RFAFREHGDAYSFDGPWGILAHAFAPGAGLGGDAHFDEAETWTKG-HKGPNLFLVAVHEI 221
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H +D+ SY S DI
Sbjct: 222 GHSLGLDHS-----------------SDTRAIMFPSYRDVDYRRFRLS--------TDDI 256
Query: 189 VAVQKIYGAPKGS 201
+Q +YG P
Sbjct: 257 RGIQSLYGRPDKH 269
>gi|332162352|ref|YP_004298929.1| putative serine protease [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666582|gb|ADZ43226.1| putative serine protease [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 1806
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 73/291 (25%), Gaps = 35/291 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI------- 262
+ + + TI + L V N I + I T
Sbjct: 500 NGNRVVARGVFTIIGRQHEVLAVNFASSPVSNRIIKRDAYGAFIHSGSGEATTTAYAQLT 559
Query: 263 -------AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
A + ++ G SGNDV+ + + G++ + G+ G D F A
Sbjct: 560 NRHRVLSANRLKVSNLYGGSGNDVLKAGTQGSWLVGRGGSNTYVGNRGDDVFVISASDDP 619
Query: 316 YKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSIL-EYTASYEDL 371
I V + S V + D ++ S+ + L
Sbjct: 620 KNIKGNGGRDTVLIVGKKAVTLNMARSGVTLAQGGDGDDVIISGGNNSVFIKGGRGNTTL 679
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ G DV G+ + + +Y+ + + G
Sbjct: 680 VGGDGDDVLAGGIGKNTIIGGSGKAVIYAGPQGDTIYVAEQGSIIHAGG----------- 728
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
G + +E + + + + + G
Sbjct: 729 --GADKIYGGKGNDVIEAGQGNALIDGGGGINVVSLHGTHADYIITRTDSG 777
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 54/372 (14%), Positives = 101/372 (27%), Gaps = 49/372 (13%)
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
+ +P + + H + A L Y G
Sbjct: 524 FASSPVSNRIIKRDAYGAFIHSGSGEATTTAYAQLTNRHRVLSANRLKVSNLYGGSGNDV 583
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL--GNN 205
S + ++ + SD K G L G
Sbjct: 584 LKAGT------QGSWLVGRGGSNTYVGNRGDDVFVISASDDPKNIKGNGGRDTVLIVGKK 637
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + + Q G D D+ + GG + +++ G + + +A
Sbjct: 638 AVTLNMARSGVTLAQ------GGDGDDVIISGGNNSVFIKGGRGNTTLVGGDGDDVLAGG 691
Query: 266 TVIESVVGSSGNDVVIGN------------------SANNVFFESSGNDVF--------- 298
+++G SG V+ + + GNDV
Sbjct: 692 IGKNTIIGGSGKAVIYAGPQGDTIYVAEQGSIIHAGGGADKIYGGKGNDVIEAGQGNALI 751
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSVNV 356
DG G++ + Y I R ++ + D A L ++++L F+D
Sbjct: 752 DGGGGINVVSLHGTHADYIITRTDSGYQIRDKVAGRDGTLALKNIQKLNFSDISAID--- 808
Query: 357 KQRSILEYTASYEDLIQ-VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
Q + + L G+ + S H D+ F+ L V
Sbjct: 809 LQEDTIVPID--DVLTTNWHGKPLSRSDVHLIRGANLLANDLRFNDKSVLRISAVSDGVG 866
Query: 416 GSDRGAAARHYI 427
G R +AA + +
Sbjct: 867 GRVRLSAAGNIV 878
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+GG + L+ I G I+L T + G +TI I ++V GNDV+
Sbjct: 1444 AGGRNTLNAAAISGAVK-INLVTGEANLGGTT---LTINSPQTIHNIVSGDGNDVLTAGR 1499
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N++ G + G +G + F +
Sbjct: 1500 NNSLLDGGRGRNTLVGGAGKEIFVVRKNAGG 1530
>gi|307826025|ref|ZP_07656238.1| Hemolysin-type calcium-binding region [Methylobacter tundripaludum
SV96]
gi|307732864|gb|EFO03728.1| Hemolysin-type calcium-binding region [Methylobacter tundripaludum
SV96]
Length = 671
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/393 (10%), Positives = 84/393 (21%), Gaps = 60/393 (15%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
I++ G + DV G + + +
Sbjct: 251 SGGGNDIITALRGGNDLIEAGAGQDKVNGGAGNDVIIGGADNDILAGGANDDRLYANAQI 310
Query: 135 MHPGSYNGGYPVYGVDND----YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+ G G T + + + DI
Sbjct: 311 SVADAIAAGNSQTGSGLKGEWLAGESGDDTLIGGVGNDVLTGGGGNDLLIGGAGDDDIS- 369
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G + + I + + D D + G N +
Sbjct: 370 -----GDANYVASDLNWTISTTNGVRQYSPVVGDMTPADAGADVIYAGAGNDYVWAGQGN 424
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + N ++ ++++G +GND++ G +++ GND G +G DT+ +
Sbjct: 425 DVLFGEDGNDSLNGQEGNDTLMGGAGNDIIGGQQGDDILIGGIGNDTLIGGTGQDTYIFN 484
Query: 311 APSYLYKIYRFENAIIVYDANEHKQD---------------------------------- 336
+ E + D
Sbjct: 485 RGDGRDTVIDTEKDSNLIFGEGISADDITLRLGSLALDLGNGDQVHIDGFDPNDVFNSSS 544
Query: 337 ----------------FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
L+ L Q + A + LI G D
Sbjct: 545 VSSFDFADGTELSIEQLLARGFDLDGTGQDDTITGTNTTDRISGLAGNDTLIGGAGNDSL 604
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ G D + D +
Sbjct: 605 DGGAGADILMGGAGDDTYLNVTGEDTLADTEGH 637
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/367 (13%), Positives = 86/367 (23%), Gaps = 23/367 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + G+D++ D+ G + + N + + N
Sbjct: 263 GGNDLIEAGAGQDKVNGGAGNDVIIGGADNDILAGGANDDRLYANAQISVADAIAAGNSQ 322
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT----FFYYAPSYLYK 317
E + G SG+D +IG N+V GND+ G +G D Y A +
Sbjct: 323 TGSGLKGEWLAGESGDDTLIGGVGNDVLTGGGGNDLLIGGAGDDDISGDANYVASDLNWT 382
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
I + + + + +L + L G
Sbjct: 383 ISTTNGVRQYSPVVGDMTPADAGADVIYAGAGNDYVWAGQGNDVLFGEDGNDSLNGQEGN 442
Query: 378 DVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
D G +G DI + L G+ D D
Sbjct: 443 DTLMGGAGNDIIGGQQGDDILIGGIGNDTLIGGTGQDTYIFNRGDGRDTVIDTEKDSNLI 502
Query: 434 GRNPDAFKALEYIASHEDLINAFAD----APDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+ + L D + S + L
Sbjct: 503 FGEGISADDITLRLGSLALDLGNGDQVHIDGFDPNDVFNSSSVSSFDFADGTELSIEQLL 562
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
DL D T+ L A ++ L + A
Sbjct: 563 ARGFDLDGTGQDDTIT-----GTNTTDRISGLAGNDTLIGGAGNDSLDGGAGADILMGGA 617
Query: 550 GKDHFSN 556
G D + N
Sbjct: 618 GDDTYLN 624
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 54/425 (12%), Positives = 108/425 (25%), Gaps = 37/425 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + ++ D D G+G+I+ ++ +
Sbjct: 95 EGGDDTLNGGTGNDTLIGGQGNDTYIYTQGDGFDTLLDSDGQGSIIYNDIT--LSGGSQY 152
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ VD ++ + + + + T + + V +
Sbjct: 153 GDARVHRDANKRLYVDVGQGLVIDGNIMIKDYQSGNLNLTMTGAVAETNPQTTLDIVGDL 212
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G+ K + Q ++ T+YDS G+D I +
Sbjct: 213 ASLNTGADALGNIKTDPSQAEANRKDTLYDSPGND------------RILSGGGNDIITA 260
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
N I + V G +GNDV+IG + N++ + +D ++ + A
Sbjct: 261 LRGGNDLIEAGAGQDKVNGGAGNDVIIGGADNDILAGGANDDRLYANAQISVADAIAAGN 320
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ E L + +L + LI
Sbjct: 321 SQTGSGLKG------------------EWLAGESGDDTLIGGVGNDVLTGGGGNDLLIGG 362
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D ++ L+ T Y D+ A +
Sbjct: 363 AGDDDISGDANYVASDLNWTISTTNGVRQYSPVVGDMTPADAGADVIYAGAGNDYVWAGQ 422
Query: 435 RNPDAF-----KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
N F +L ++ L+ + Q G D + Y+
Sbjct: 423 GNDVLFGEDGNDSLNGQEGNDTLMGGAGNDIIGGQQGDDILIGGIGNDTLIGGTGQDTYI 482
Query: 490 GSYDD 494
+ D
Sbjct: 483 FNRGD 487
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 32/82 (39%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T ++ + + +++G SGND+++G ++ +GND G G DT
Sbjct: 59 TGEDTTTRTGYTDDLLIGDANGNTLLGQSGNDILLGEGGDDTLNGGTGNDTLIGGQGNDT 118
Query: 307 FFYYAPSYLYKIYRFENAIIVY 328
+ Y + + +
Sbjct: 119 YIYTQGDGFDTLLDSDGQGSII 140
>gi|77747511|ref|NP_297958.2| hemolysin-type calcium binding protein [Xylella fastidiosa 9a5c]
Length = 1207
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/298 (14%), Positives = 87/298 (29%), Gaps = 81/298 (27%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES- 270
+ S I+ G ++L GG + + + ++ G + N T+ ++
Sbjct: 641 SAEGSTAADLIFGDAGANIL----RGGAGDDVLSGGDGDDTLYGGDGNDTLYGDAGNDTL 696
Query: 271 --------------------------VVGSSGNDVVIGN--SANNVFFESSGNDVFDGSS 302
+ G +G+DV+ + SA+NV +G+D GS+
Sbjct: 697 YGGGGNDLLLGGDGDDVLDGGEGSNRLEGGAGDDVLKVSYWSADNVLIGGTGDDTLYGSA 756
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDAN--------------------EHKQDFLS--- 339
DT+ + I + + D +
Sbjct: 757 FADTYLFNQGDGHDTIIEQGGTDKLVFGEGIVAADVRLLRQGQDVVLDLGNGHDSIRLKD 816
Query: 340 ------------DVERLRFADQC-----------IDSVNVKQRSILEYTASYEDLIQVIG 376
D+E++ FAD + ++ L+ + L+ G
Sbjct: 817 WLTSNGTRNHSADIEQIVFADGTLWTPETLSSMGLTTLGTSGNDTLKGWQGKDILLGGAG 876
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
DV + + G D+ Y + + L G D + T+ +G
Sbjct: 877 DDVLDGGEGSNRLEGGAGNDVLK--VSYWSADNVLIGGTGDDTLYGSAFADTYLFNQG 932
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 45/365 (12%), Positives = 94/365 (25%), Gaps = 67/365 (18%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + T + + D DV G G + L +
Sbjct: 679 YGGDGNDTLYGDAGNDTLYGGGGNDLLLGGDGDDVLDGGEGSNRLEGGAGDDV----LKV 734
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA---- 190
+ + N G D Y + T + + D++++ + A
Sbjct: 735 SYWSADNVLIGGTGDDTLYGSAFADTYLFNQGDGHDTIIEQGGTDKLVFGEGIVAADVRL 794
Query: 191 --------VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+ G L + + + + Q ++ G L
Sbjct: 795 LRQGQDVVLDLGNGHDSIRLKDWLTSNGTRNHSADIEQIVFADG---TLWTPETLSSMGL 851
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA-----------NNVFFE 291
L T ++ G++ + + + G G++ + G + +NV
Sbjct: 852 TTLGTSGNDTLKGWQGKDILLGGAGDDVLDGGEGSNRLEGGAGNDVLKVSYWSADNVLIG 911
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN-------------------- 331
+G+D GS+ DT+ + I +
Sbjct: 912 GTGDDTLYGSAFADTYLFNQGDGHDTIIEQGGTDKLVFGEGILAADVRLLREGQDVVLDL 971
Query: 332 EHKQDFLS---------------DVERLRFADQCI--DSVNVKQRSILEYTASYEDLIQV 374
+ D + D+E++ FAD + T + L
Sbjct: 972 GNGHDSIRLKDWLTSNGTRNHSADIEQIVFADGTLWTPETLSSMGLTTLGTPGNDTLKGW 1031
Query: 375 IGQDV 379
G+D+
Sbjct: 1032 QGKDI 1036
Score = 45.2 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 37/277 (13%), Positives = 66/277 (23%), Gaps = 28/277 (10%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
I G +L + + TI + GG D L + L
Sbjct: 905 ADNVLIGGTGDDTLYGSAFADTYLFNQGDGHDTIIEQGGTDKLVFGEGILAADVRLLREG 964
Query: 249 SWSSIGGYEKNMTI------------AQHTVIESVV---GSSGNDVVIGNSANNVFFESS 293
+ + +I IE +V G+ + + +
Sbjct: 965 QDVVLDLGNGHDSIRLKDWLTSNGTRNHSADIEQIVFADGTLWTPETLSSMGLTTL-GTP 1023
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
GND G G D + N + D L + +
Sbjct: 1024 GNDTLKGWQGKDILLGGDGDDVLDGGEGSNRLE----GGAGNDVLK----VSYWSADNVL 1075
Query: 354 VNVKQRSILEYTASYED--LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ L +A + + G D + EG + + S DDL
Sbjct: 1076 IGGTGDDTLYGSAFADTYLFNKGDGHDTIIEQSGTDKLVFGEG--LHQKEARFTRSGDDL 1133
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+F +G F+ ++
Sbjct: 1134 SLLFNGSEDQVTIAGWFNGSGHQVESLVFQDGTVLSG 1170
Score = 44.0 bits (102), Expect = 0.084, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 84/303 (27%), Gaps = 29/303 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + +V G G T+ G
Sbjct: 874 GAGDDVLDGGEGSNRLEGGAGNDVLKVSYWSADNVLIGGTGDDTLYGSAFADTYLFNQGD 933
Query: 135 MHPGSYNGGYPVYGVDNDYENDS-------FLTSVMSYFMPQDSMMDASFGYCATPM--V 185
H G V + + V+ DS+ +
Sbjct: 934 GHDTIIEQGGTDKLVFGEGILAADVRLLREGQDVVLDLGNGHDSIRLKDWLTSNGTRNHS 993
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+DI + G + + + +P T+ G D+L V +
Sbjct: 994 ADIEQIVFADG--TLWTPETLSSMGLTTLGTPGNDTLKGWQGKDILLGGDGDDVLDG--- 1048
Query: 246 NTESWSSIGGYEKNMTI--AQHTVIESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGS 301
E + + G N + + + ++G +G+D + G++ + F + G+D
Sbjct: 1049 -GEGSNRLEGGAGNDVLKVSYWSADNVLIGGTGDDTLYGSAFADTYLFNKGDGHDTIIEQ 1107
Query: 302 SGLDTFFYYAPSYL--YKIYRFENAIIVYDANEHKQDFLSD--------VERLRFADQCI 351
SG D + + + R + + + Q ++ VE L F D +
Sbjct: 1108 SGTDKLVFGEGLHQKEARFTRSGDDLSLLFNGSEDQVTIAGWFNGSGHQVESLVFQDGTV 1167
Query: 352 DSV 354
S
Sbjct: 1168 LSG 1170
>gi|73955234|ref|XP_546550.2| PREDICTED: similar to Matrilysin precursor (Pump-1 protease)
(Uterine metalloproteinase) (Matrix metalloproteinase-7)
(MMP-7) (Matrin) [Canis familiaris]
Length = 263
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 56/190 (29%), Gaps = 46/190 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKF 81
W++ I Y+ T F + +L AL WSK + L+F +DI
Sbjct: 104 WTSEVITYRIASYTPDLPRFRVNQL-------VAKALAMWSKEIPLSFRRVPRGTADIMI 156
Query: 82 ISSNNGYV-CTPRYDSRYF------------MEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + P + +FD+ + W G G A HE+
Sbjct: 157 GFARGAHGDYYPFDGPGNILAHAFAPGPDLGGDAHFDEDERWTDGSRIGINFLIAATHEL 216
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + D DI
Sbjct: 217 GHSLGLGHSSDPDAVMYPTYSIRDS-------------------------KSFKLSQDDI 251
Query: 189 VAVQKIYGAP 198
+QK+YG
Sbjct: 252 EGIQKLYGGN 261
>gi|930269|emb|CAA38526.1| propeptide for matix metalloproteinase (type I collagenase) [Sus
scrofa]
Length = 445
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 57/185 (30%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W N + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 84 RWENTHLTYRIENYTPDLSREDVD-------RAIEKAFQLWSNVSPLTFTKVSEGQADIM 136
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 137 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTKNF-RDYNLYRVAA 193
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H +Y D D Y ++ + + T
Sbjct: 194 HELGHSLGLSHSTDIGALMYPNYIYTGDVQLSQDDIDGIQAIYGPSENPVQPSG---PQT 250
Query: 183 PMVSD 187
P V D
Sbjct: 251 PQVCD 255
>gi|291567202|dbj|BAI89474.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 377
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 34/99 (34%), Gaps = 2/99 (2%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ I L + +I G N TI + + G G+D++ GN N+ SGND
Sbjct: 56 NNEQGRILLGHQGNDTIIGNSGNDTIYGGQNDDYLEGGYGDDMLFGNRGNDTLIGGSGND 115
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G G D S + + + Q
Sbjct: 116 TIYGGVGNDWIV--GGSGNNVLSGDRGLDTLTGGSGVNQ 152
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 37/143 (25%), Gaps = 28/143 (19%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+I + N + + ++G GND +IGNS N+ + +D +G G D
Sbjct: 39 PGLPQAIALLQGNDYLVNNEQGRILLGHQGNDTIIGNSGNDTIYGGQNDDYLEGGYGDDM 98
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F + +Y + +
Sbjct: 99 LF--GNRGNDTLIGGSGNDTIY--------------------------GGVGNDWIVGGS 130
Query: 367 SYEDLIQVIGQDVFESMKHFYEF 389
L G D +F
Sbjct: 131 GNNVLSGDRGLDTLTGGSGVNQF 153
>gi|163747732|ref|ZP_02155075.1| hypothetical protein OIHEL45_16931 [Oceanibulbus indolifex HEL-45]
gi|161378995|gb|EDQ03421.1| hypothetical protein OIHEL45_16931 [Oceanibulbus indolifex HEL-45]
Length = 585
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 59/161 (36%), Gaps = 10/161 (6%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D+ ++ + G + I I G N T+ + + +VG S ND + G
Sbjct: 421 DTMKGSSIEDHMFGYGGDDILKGEGGDDFISGMRGNDTLYGGSGDDRMVGLSDNDQLFGE 480
Query: 284 SANNVFFESSGNDVFDGSS---------GLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
N++ GND DG + G DTF ++ S +I F+ + D
Sbjct: 481 EGNDLLRGGEGNDRLDGGAGNDRLYGGKGNDTFIFWQGSGQDRINDFQIGADLIDLESLG 540
Query: 335 QDFLSDVER-LRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
S++E Q + + S++ + + L Q
Sbjct: 541 LSSFSELEEMFNDTKQGLKIAFNAEDSVVIVGHTADQLSQW 581
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 37/123 (30%), Gaps = 19/123 (15%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G +N T+ ++ + + G G+D++ G ++ GND G SG D S
Sbjct: 416 GTMQNDTMKGSSIEDHMFGYGGDDILKGEGGDDFISGMRGNDTLYGGSGDDRMV--GLSD 473
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+++ E D L E L + I
Sbjct: 474 NDQLF-----------GEEGNDLLRGGE------GNDRLDGGAGNDRLYGGKGNDTFIFW 516
Query: 375 IGQ 377
G
Sbjct: 517 QGS 519
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 37/148 (25%), Gaps = 40/148 (27%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ GSS D + G +++ G+D G G DT +
Sbjct: 420 NDTMKGSSIEDHMFGYGGDDILKGEGGDDFISGMRGNDTLY------------------- 460
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
V + L + L G D +
Sbjct: 461 ------------------GGSGDDRMVGLSDNDQLFGEEGNDLLRGGEGNDRLDGGAGND 502
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+G D + GS D N F
Sbjct: 503 RLYGGKGNDT---FIFWQGSGQDRINDF 527
>gi|326329348|ref|ZP_08195673.1| type I secretion target repeat protein [Nocardioidaceae bacterium
Broad-1]
gi|325952923|gb|EGD44938.1| type I secretion target repeat protein [Nocardioidaceae bacterium
Broad-1]
Length = 546
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/323 (13%), Positives = 77/323 (23%), Gaps = 13/323 (4%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ Y S + D + G G I + + + +A L G
Sbjct: 227 TGTDYADRFTGGSGNSIIDGRAGNDWFAPGAGTDLITGGSGVDTVSYA-NLTSGVRIYLG 285
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
P Y + D G ++ I G
Sbjct: 286 QPAYYGAGAGRETIEE----VENLTGSPYADNLVGDLGGNVILGGGGSDYINGLNGNDRL 341
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG----VKNYIDLNTESWSSIGGYEKN 259
+ + T+ G D + S +
Sbjct: 342 DGGTGNDTFWPGKD-NDTVIGGSGTDTISYKGYYRPIQISLATTRAQNTGSSGYETVSQT 400
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I + + + G+SG + + N+ G+DV G +G DT Y ++
Sbjct: 401 ENIIGTSYSDRLAGNSGRNTITAGYGNDTVLPGHGDDVVSGGAGSDTISYRNVGVGVRVS 460
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D ++ VE + + + L A + L G D
Sbjct: 461 LAA---TSRQRTNAGYDKITYVENVIGTTRADVLKGNGSANRLYGDAGGDKLYGSGGADK 517
Query: 380 FESMKHFYEFGLSEGRDITFDSY 402
GRD ++
Sbjct: 518 LYGGTGSDYGDGGTGRDSSYSVE 540
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/288 (15%), Positives = 90/288 (31%), Gaps = 20/288 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ I GDD +D Y + + ++ +
Sbjct: 163 SEGDVLRGGDGADRIAGGAGDDSIDGGAGTDKATYAESASGIVATTTKVTGGLGTDTLAG 222
Query: 268 IESVVG---------SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
IE + G SGN ++ G + N+ F +G D+ G SG+DT Y + +I
Sbjct: 223 IEELTGTDYADRFTGGSGNSIIDGRAGNDWFAPGAGTDLITGGSGVDTVSYANLTSGVRI 282
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
Y + A ++ + +VE L + + V +++ + + + G D
Sbjct: 283 YLGQPAYY---GAGAGRETIEEVENLTGSPYADNLVGDLGGNVILGGGGSDYINGLNGND 339
Query: 379 VFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+ F + D D+ Y G Y ++ + R V +
Sbjct: 340 RLDGGTGNDTFWPGKDNDTVIGGSGTDTISYKGYYRPIQISLATTRAQNTGSSGYETVSQ 399
Query: 434 GRNPDAFKALEYIASHED---LINAFADAPDLVQVGKDHFSNFGCEEG 478
N + +A + + + + L G D S +
Sbjct: 400 TENIIGTSYSDRLAGNSGRNTITAGYGNDTVLPGHGDDVVSGGAGSDT 447
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 35/319 (10%), Positives = 71/319 (22%), Gaps = 6/319 (1%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
LD + + + + + I ++++G S D++ G ++V
Sbjct: 56 LDDVIAVPAGATVSGLGGNDTICVVGQGGAEIYGGAGNDTLIGGSDGDLLNGGDGDDVAR 115
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQ 349
G+D+ + +SG D + + + V S+ + LR D
Sbjct: 116 AGEGDDLIEETSGND--VLAGDAGGDIVLAGSGSDEVDGGVGDDVISGGSEGDVLRGGDG 173
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
++ A + + + G D G+
Sbjct: 174 ADRIAGGAGDDSIDGGAGTDKATYAESASGIVATT--TKVTGGLGTDTLAGIEELTGTDY 231
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
R GS G D + + L Q
Sbjct: 232 ADRFTGGSGNSIIDGRAGNDWFAPGAGTDLITGGSGVDTVSYANLTSGVRIYLGQPAYYG 291
Query: 470 FSNFGCEEGRFVTFDSYLYLGSY-DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
Y + DL G + +G
Sbjct: 292 AGAGRETIEEVENLTGSPYADNLVGDLGGNVILGGGGSDYINGLNGNDRLDGGTGNDTFW 351
Query: 529 YIASHEDLINAFADAPDLV 547
++ +I
Sbjct: 352 PGKDNDTVIGGSGTDTISY 370
>gi|257094797|ref|YP_003168438.1| peptidase S8/S53 subtilisin kexin sedolisin [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047321|gb|ACV36509.1| peptidase S8 and S53 subtilisin kexin sedolisin [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 1388
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/491 (13%), Positives = 131/491 (26%), Gaps = 56/491 (11%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
T E + D + N + R + AD G+G +
Sbjct: 549 TVIENADTGDGNDVLIGNDAANSLRGWRGNDLLDGGPGADTLEGGVGDDVYVV------- 601
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
+ V ND+ T++ +Y + + A G + +
Sbjct: 602 ------------DSAGDVLVEAATGGNDTVRTTLAAYVLGANLEKLAFVGTGSFSGTGNG 649
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
A G + T+ GDD + +G N ++L E
Sbjct: 650 TANVITGG-----------FGNDSLNGGIGVDTLIGGVGDDSYYVDNLG--DNVVELAGE 696
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ + A I + + GN N + + +V G+ G DT++
Sbjct: 697 GNDIVYSSVASTLGANLERI--SLTGNAAISATGNELANTLYGNGAANVLSGALGDDTYY 754
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTAS 367
+ I + + +++ER+ I + + + L +
Sbjct: 755 VGSG---DTIVELASEGNDIVYSTVAWTLGANLERISLTGNAAISATGNELANTLYGNGN 811
Query: 368 --YEDLIQVIGQDVFESMKH--FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
L +G D + E + LG+ + ++ G+ A
Sbjct: 812 GAANVLSGGLGDDTYYVGSGDTIVELASGGNDIVCSSVAWTLGANLERLSLTGNAAINAT 871
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ + + + N A + + S ++ G D ++G
Sbjct: 872 GNELANTLYGNSNSAANVLIGGLGSDTYFAGEGDTISEMADEGSDKVYSYGDAS--LSAN 929
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
LYL + + R G L + + L
Sbjct: 930 VENLYL---NVSAAATLTGNELPNRVSGNIG---------NDILIGLFGSDTLDGGLGAD 977
Query: 544 PDLVQAGKDHF 554
+ AG D +
Sbjct: 978 TLIGGAGNDTY 988
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 62/350 (17%), Positives = 104/350 (29%), Gaps = 41/350 (11%)
Query: 203 GNNIY----KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GN+ Y K V P + + D GG D ++ I +DL SSI G
Sbjct: 485 GNDTYVYTDKFSVLAPADPARRVLSDLGGTDNVNTASIASD-TLLDLRPGYSSSIDGQT- 542
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANN------------------VFFESSGNDVFDG 300
+ I+ TVIE+ GNDV+IGN A N G+DV+
Sbjct: 543 -VVISAGTVIENADTGDGNDVLIGNDAANSLRGWRGNDLLDGGPGADTLEGGVGDDVYVV 601
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
S D A + A ++ E +
Sbjct: 602 DSAGDVLVEAATGGNDTVRTTLAAYVLGANLEKLAFVGTGSFSGTGNGTANVITGGFGND 661
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFG--LSEGRDITFDSYLY-LGSYDDLRNVFGS 417
L + LI +G D + EG DI + S LG+ + ++ G+
Sbjct: 662 SLNGGIGVDTLIGGVGDDSYYVDNLGDNVVELAGEGNDIVYSSVASTLGANLERISLTGN 721
Query: 418 DRGAAARHYIT-----HGVKEGRNPDAFKALEYIASHEDLINAFADA--------PDLVQ 464
+A + + +G + Y+ S + ++ ++ +
Sbjct: 722 AAISATGNELANTLYGNGAANVLSGALGDDTYYVGSGDTIVELASEGNDIVYSTVAWTLG 781
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ S G + L + S +Y+ G
Sbjct: 782 ANLERISLTGNAAISATGNELANTLYGNGNGAANVLSGGLGDDTYYVGSG 831
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 63/390 (16%), Positives = 120/390 (30%), Gaps = 33/390 (8%)
Query: 199 KGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G++GN+I T+ G+D + + + ++L +E S+
Sbjct: 953 SGNIGNDILIGLFGSDTLDGGLGADTLIGGAGNDTYYIDNL--NDSIVELASEGDDSVYS 1010
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPS 313
T+ + + G++ GN N ++ + +V G G D ++ +
Sbjct: 1011 SVG-WTLGANVERLCLTGTAAIAG-TGNELANTLAGNANSTANVLAGGLGDDGYYVGSGD 1068
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTAS--YED 370
+ ++ N + S++ERL I + L A+
Sbjct: 1069 SVVELLGEGN---DIVYSSMSWTLGSNIERLYLTGSAAITGTANALANTLYGNANSAANV 1125
Query: 371 LIQVIGQDVFESMKH-FYEFGLSEGRDITFDS-YLYLGSYDDLRNVFGSDRGAAARHYIT 428
L +G D + EG DI + LG+ + + GS A + +
Sbjct: 1126 LAGGLGDDGYYVGIGDTVVEFSGEGNDIVYSDISWTLGANVERLYLTGSSAIAGTGNDLA 1185
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+ + N A + A A ++ + G D ++G + LY
Sbjct: 1186 NTLYGSANSAANVLAGGLGDDAYYAGAGDTAIEMAKQGIDSVYSYGDYS--LLDNIENLY 1243
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
L S + G++ I A L +A + L + D
Sbjct: 1244 L-SNSTAAALTGNELANRVSGNI-----------ANDILIGLAGRDTLDGSLGDDILEGG 1291
Query: 549 AGKDHFSNFGYEEGRSITFNPDLYLTSYDD 578
G D FG F+ +D
Sbjct: 1292 VGDD--ILFGGGGSDRFVFDTAFGTDRIND 1319
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 62/415 (14%), Positives = 119/415 (28%), Gaps = 47/415 (11%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D L ++ EL ++ + + E S+ + ++ N T
Sbjct: 679 DSYYVDNLGDNVVELAGEGNDIV---YSSVASTLGANLERISLTGNAAISATGNELANTL 735
Query: 93 RYDSRYFMEINFDKADVWRYGIGK---------GTILSHNALHEIGHALGLMHPGSYNGG 143
+ + D + G G I+ +G L +
Sbjct: 736 YGNGAANVLSGALGDDTYYVGSGDTIVELASEGNDIVYSTVAWTLGANLERISLTGNAAI 795
Query: 144 YPVYGVDND--YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS--DI----------- 188
+ Y N + +V+S + D+ S DI
Sbjct: 796 SATGNELANTLYGNGNGAANVLSGGLGDDTYYVGSGDTIVELASGGNDIVCSSVAWTLGA 855
Query: 189 -VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNY 242
+ + G + N + + + G D D +
Sbjct: 856 NLERLSLTGNAAINATGNELANTLYGNSNSAANVLIGGLGSDTYFAGEGDTISEMADEGS 915
Query: 243 IDLNTESWSSIGGYEKNM--------TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ + +S+ +N+ T+ + + V G+ GND++IG ++ G
Sbjct: 916 DKVYSYGDASLSANVENLYLNVSAAATLTGNELPNRVSGNIGNDILIGLFGSDTLDGGLG 975
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDS 353
D G +G DT++ + E VY + ++VERL I
Sbjct: 976 ADTLIGGAGNDTYYIDNLNDSIVELASEGDDSVY--SSVGWTLGANVERLCLTGTAAIAG 1033
Query: 354 VNVKQRSILEYTAS--YEDLIQVIGQDVFESMKHFYEFG-LSEGRDITFDSYLYL 405
+ + L A+ L +G D + L EG DI + S +
Sbjct: 1034 TGNELANTLAGNANSTANVLAGGLGDDGYYVGSGDSVVELLGEGNDIVYSSMSWT 1088
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 68/202 (33%), Gaps = 6/202 (2%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
Y G V+ E + + S +S+ + + G A + +A +YG
Sbjct: 1132 DDGYYVGIGDTVVEFSGEGNDIVYSDISWTLGANVERLYLTGSSAIAGTGNDLANT-LYG 1190
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ + + + T + G D + + + I+ S S+
Sbjct: 1191 SANSAANVLAGGLGDDAYYAGAGDTAIEMAKQGIDSVYSYGDYSLLDNIENLYLSNSTAA 1250
Query: 255 GYEKN---MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
N ++ + + ++G +G D + G+ +++ G+D+ G G D F +
Sbjct: 1251 ALTGNELANRVSGNIANDILIGLAGRDTLDGSLGDDILEGGVGDDILFGGGGSDRFVFDT 1310
Query: 312 PSYLYKIYRFENAIIVYDANEH 333
+I F V +
Sbjct: 1311 AFGTDRINDFTPGEDVIQLSSA 1332
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/282 (17%), Positives = 82/282 (29%), Gaps = 15/282 (5%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
Y G V+ E + + S MS+ + + G A ++ +A +YG
Sbjct: 1059 DDGYYVGSGDSVVELLGEGNDIVYSSMSWTLGSNIERLYLTGSAAITGTANALANT-LYG 1117
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ + T+ + G+ V + I +
Sbjct: 1118 NANSAANVLAGGLGDDGYYVGIGDTVVEFSGE------GNDIVYSDISWTLGANVERLYL 1171
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ IA T + G+ NSA NV G+D + +G DT A +
Sbjct: 1172 TGSSAIA-GTGNDLANTLYGSA----NSAANVLAGGLGDDAYYAGAG-DTAIEMAKQGID 1225
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+Y + + D E+ S L + IL A + L +G
Sbjct: 1226 SVYSY-GDYSLLDNIENLYLSNSTAAALTGNELANRVSGNIANDILIGLAGRDTLDGSLG 1284
Query: 377 QDVFESMKHFYEFGLSEGRD-ITFDSYLYLGSYDDLRNVFGS 417
D+ E G D FD+ +D
Sbjct: 1285 DDILEGGVGDDILFGGGGSDRFVFDTAFGTDRINDFTPGEDV 1326
>gi|260820268|ref|XP_002605457.1| hypothetical protein BRAFLDRAFT_120668 [Branchiostoma floridae]
gi|229290790|gb|EEN61467.1| hypothetical protein BRAFLDRAFT_120668 [Branchiostoma floridae]
Length = 548
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 61/199 (30%), Gaps = 56/199 (28%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETSI-HS 77
D W + Y+ T L+P+ +E R WS V L F ET+ ++
Sbjct: 127 DYRWKKNDLTYRIWNYTPD--------LSPSQVREAIRRGFQVWSDVTPLRFRETTSSNA 178
Query: 78 DIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + P +F D + W G+ GT L
Sbjct: 179 DINIQFSRFDHRDGYPFDGRGGTLAHAFYPEDGRTHF-----DDDEQWTDGMYAGTNLFI 233
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HEIGHALGL H SY + +
Sbjct: 234 VTAHEIGHALGLAH--------------------------SSYPGALMAPFYQGYDPDFK 267
Query: 183 PMVSDIVAVQKIYGAPKGS 201
V D +Q++YG P S
Sbjct: 268 LPVDDTRGIQQLYGMPDVS 286
>gi|220925547|ref|YP_002500849.1| CHRD domain containing protein [Methylobacterium nodulans ORS 2060]
gi|219950154|gb|ACL60546.1| CHRD domain containing protein [Methylobacterium nodulans ORS 2060]
Length = 460
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/348 (14%), Positives = 94/348 (27%), Gaps = 24/348 (6%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
I N+ V P D + + ++ D I + +A +G
Sbjct: 84 GQINPAQDNDDLVIVPNADGSWTVSGRWETTDPANVSIANFSTTLGSA------TVGSEV 137
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
P +N + +++ ++ + + P + V + G
Sbjct: 138 PLYFNVHTNQFPAGE------IRGQLVAIADDSNNTVVGTADDELLPGLGGDDIVLGLAG 191
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWS 251
G+ +++ G+DL+ D GG N +
Sbjct: 192 NDTIQGGD----GNDFVSGGFGADSVFGGAGNDLVFGDDDDDLADGGAGNDLVYGGTGSD 247
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + + + V G GND V G N+V +GND+ G G D +
Sbjct: 248 RVFGAAGDDQVYGEWGNDFVSGGEGNDFVSGGFGNDVVNGDAGNDLIFGDDGDDAVY--G 305
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYED 370
+ ++Y +V Q F E + L +
Sbjct: 306 GAGNDRVYGGTGNDLVSGDGGQDQLFGEQGEDVLLGGAGPDYLSGGAGNDQLFGGEGADL 365
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
L G DV F G G + F +
Sbjct: 366 LFGNAGNDVLTGGLGADVFAFGRGDGQDVIRDFVTGGAERDVIAFNNG 413
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 48/284 (16%), Positives = 84/284 (29%), Gaps = 14/284 (4%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T + + D+ G TI + + G G V+G
Sbjct: 165 NNTVVGTADDELLPGLGGDDIVLGLAGNDTIQGGDGNDFVSGGFGADSVFGGAGNDLVFG 224
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
D+D D + + Y + D FG V + G + +
Sbjct: 225 DDDDDLADGGAGNDLVYGG---TGSDRVFGAAGDDQVYGEWGNDFVSGGEGNDFVSGGFG 281
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
I+ GDD + + + GG N + + G + +
Sbjct: 282 -NDVVNGDAGNDLIFGDDGDDAVYGGAGNDRVYGGTGNDLVSGDGGQDQLFGEQGEDVLL 340
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G +GND + G ++ F ++GNDV G G D F + I F
Sbjct: 341 GGAGPDYLSGGAGNDQLFGGEGADLLFGNAGNDVLTGGLGADVFAFGRGDGQDVIRDF-- 398
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
V E ++ FA + V +++ Y
Sbjct: 399 ---VTGGAERDVIAFNNGAFGSFAAVQAATQQVGSDAVIAYGTG 439
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/244 (12%), Positives = 62/244 (25%), Gaps = 19/244 (7%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ +VVG++ ++++ G +++ +GND G G D F
Sbjct: 154 RGQLVAIADDSNNTVVGTADDELLPGLGGDDIVLGLAGNDTIQGGDGND--FVSGGFGAD 211
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
++ +V+ ++ + ++ + + G
Sbjct: 212 SVFGGAGNDLVFGDDDDD-----------------LADGGAGNDLVYGGTGSDRVFGAAG 254
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D EG D + D N Y G
Sbjct: 255 DDQVYGEWGNDFVSGGEGNDFVSGGFGNDVVNGDAGNDLIFGDDGDDAVYGGAGNDRVYG 314
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ + L + L G D+ S + F + L G+ +
Sbjct: 315 GTGNDLVSGDGGQDQLFGEQGEDVLLGGAGPDYLSGGAGNDQLFGGEGADLLFGNAGNDV 374
Query: 497 NVFG 500
G
Sbjct: 375 LTGG 378
>gi|163815758|ref|ZP_02207129.1| hypothetical protein COPEUT_01938 [Coprococcus eutactus ATCC 27759]
gi|158448899|gb|EDP25894.1| hypothetical protein COPEUT_01938 [Coprococcus eutactus ATCC 27759]
Length = 1746
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 66/518 (12%), Positives = 142/518 (27%), Gaps = 45/518 (8%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S + +I G S D +D G + + + G
Sbjct: 815 SGTNQNSYIFGKAGDDQL-SGGSGSDRIYGEDGSDKLYGNAGNDILSGGSGDDCLDGGSG 873
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV---A 190
N G D++Y + + + + + V+ + A
Sbjct: 874 NDILYGGNIGDTSEDGDDEYVFSTGYGQDIIVDYGGSNTIRFTGVSSKDIRVNGVNEYDA 933
Query: 191 VQKIYGAPKGSL-----GNNIYKIEVQQ---------KDSPFIQTIYDSGGDDLL----- 231
+I G + +Y + IY + +D L
Sbjct: 934 EIRIQGTNDTLTLKNFCKDEVYTDYTLIFRDKKIHCLDEDSPFHYIYGTETEDSLKAVVE 993
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + G +N + + I G + I +++ G G D + +++ F
Sbjct: 994 DSYMYGYAENDTIIGSAGKDIIYGNAGDDQIEAGDGADTIYGGDGKDQIKAGDGDDILFG 1053
Query: 292 SSG---------NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS--- 339
+G ND G G DT+ + + I + + L+
Sbjct: 1054 GAGADILCGNKGNDYMFGEEGDDTYIFDKSDGVDVIEDNSGTSTIQFGEGIHLNDLTAMK 1113
Query: 340 -DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ D + V Y+ + E I +G+D + + +E I
Sbjct: 1114 VGDDLFFLISGTADRLVVTG-----YSDNPERFIVYVGEDEVDVSDILTKTDAAELPQID 1168
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
++ +++ + A+ + + D + I+ E+ FA+
Sbjct: 1169 GETDSSPDVTEEIPQIATPTDADASDDAMDSSAQASDKRDVSDNVNIISGTENSDAVFAE 1228
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLY--LGSYDDLRNVFGSDRGAAARHYITHGVK 516
+ F + + DD V+G D + + +G
Sbjct: 1229 NSKNFIFAGAEYDYIVGGSNADYIFGDRDVDRILAGDDADVVYGMDGDD--QVFGENGDD 1286
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ A ++ +I+ + A D +
Sbjct: 1287 IISGGAGNDYVSGGAGNDVVISQSGNDFIDGGADDDTY 1324
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 80/283 (28%), Gaps = 48/283 (16%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G + D +YI + G + I + + G++GND++ G S +
Sbjct: 807 GTEKADRYSGTNQNSYI-FGKAGDDQLSGGSGSDRIYGEDGSDKLYGNAGNDILSGGSGD 865
Query: 287 NVFFESSGNDVFDGS-------SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ SGND+ G G D + + I + + + +D
Sbjct: 866 DCLDGGSGNDILYGGNIGDTSEDGDDEYVFSTGYGQDIIVDYGGSNTIRFTGVSSKDIRV 925
Query: 340 DVE-------RLRFADQCIDSVNVKQRSI------------------------LEYTASY 368
+ R++ + + N + + + T +
Sbjct: 926 NGVNEYDAEIRIQGTNDTLTLKNFCKDEVYTDYTLIFRDKKIHCLDEDSPFHYIYGTETE 985
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L V+ S G+DI Y + DD A Y
Sbjct: 986 DSLKAVVEDSYMYGYAENDTIIGSAGKDII-----YGNAGDDQIEAGDG----ADTIYGG 1036
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
G + + D L A + L + + G D +
Sbjct: 1037 DGKDQIKAGDGDDILFGGAGADILCGNKGNDYMFGEEGDDTYI 1079
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 57/249 (22%), Gaps = 65/249 (26%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++I + + ++++G GN+ + GN ++ G D+ G +G D + Y
Sbjct: 1429 TTIVAENGDDQLNGSEASDNLIGGDGNNRIAGNGGDDYLDGGKGTDMLYGGAGADVYIYQ 1488
Query: 311 APSYLYKIYRFENAIIV-----------------------------YDANEHKQDFLSDV 341
I + I+ ++ D L +
Sbjct: 1489 KGYGTDTISDAQGENIIEITGYGISDIKAYRTNWNNLTMILDGSGEAGLSDSGADKLI-I 1547
Query: 342 ERLRFADQ-------------------------------CIDSVNVKQRSILEYTASYED 370
E +D R +
Sbjct: 1548 ENFFVSDANRQYKVICDGSVFGITDFGSPCRTLYGTAGSDYMLGFDGGRMTYYGLDGADT 1607
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L G DV G D D L G+D Y T
Sbjct: 1608 LNGSDGTDVLYGGTGDDRILGGNGNDCLLGEAG----NDYLEGGAGNDTYYFGIGYGTDS 1663
Query: 431 VKEGRNPDA 439
+ + +
Sbjct: 1664 ISDNSGINE 1672
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/303 (14%), Positives = 90/303 (29%), Gaps = 25/303 (8%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T+ ++ I+ G + + + D ++ + + I
Sbjct: 1403 TASGGVLRTINDWEGTEYHTSIYTDGTTIVAENGDDQLNGSEASDNLIGGDGNNRIAGNG 1462
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G +GG + D ++ + +SDI A +
Sbjct: 1463 G---DDYLDGGKGTDMLYGGAGADVYIYQKGYGTDTISDAQGENIIEITGYGISDIKAYR 1519
Query: 193 KIY-------------GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----T 234
+ G I + + + I D + D T
Sbjct: 1520 TNWNNLTMILDGSGEAGLSDSGADKLIIENFFVSDANRQYKVICDGSVFGITDFGSPCRT 1579
Query: 235 LIGGVKNYIDLN-TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
L G + L + G + T+ + + G +G+D ++G + N+ +
Sbjct: 1580 LYGTAGSDYMLGFDGGRMTYYGLDGADTLNGSDGTDVLYGGTGDDRILGGNGNDCLLGEA 1639
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-AIIVYDANEHKQDFLSDVERLRFADQCID 352
GND +G +G DT+++ I I++ +D L VER + D I
Sbjct: 1640 GNDYLEGGAGNDTYYFGIGYGTDSISDNSGINEIIFCEGLKCEDIL--VERTNWNDLTIR 1697
Query: 353 SVN 355
Sbjct: 1698 FAG 1700
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 49/406 (12%), Positives = 98/406 (24%), Gaps = 77/406 (18%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
F + + Y ++ I +KAD + I ++ G
Sbjct: 779 STWSEHFSAISTHYAEVIELAKTGYVYIGTEKADRYSGTNQNSYIFGKAGDDQLSGGSGS 838
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G +YG + ++S D + S +
Sbjct: 839 DRIYGEDGSDKLYGNAGN--------DILSGGSGDDCLDGGSG-------------NDIL 877
Query: 195 YGAP---KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
YG G++ Y I D GG + + T + ++ E +
Sbjct: 878 YGGNIGDTSEDGDDEYVF----STGYGQDIIVDYGGSNTIRFTGVSSKDIRVNGVNEYDA 933
Query: 252 SIGGYEKNMTIA--------------------------QHTVIESVVGSSGNDVVIGNSA 285
I N T+ + + + G+ D +
Sbjct: 934 EIRIQGTNDTLTLKNFCKDEVYTDYTLIFRDKKIHCLDEDSPFHYIYGTETEDSLKAVVE 993
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
++ + + ND GS+G D + + +I + A +Y
Sbjct: 994 DSYMYGYAENDTIIGSAGKDIIY--GNAGDDQIEAGDGADTIYGG--------------- 1036
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
D IL A + L G D + + + + +
Sbjct: 1037 --DGKDQIKAGDGDDILFGGAGADILCGNKGNDYMFGEEGDDTYIFDKSDGVD----VIE 1090
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+ FG + G + + D
Sbjct: 1091 DNSGTSTIQFGEGIHLNDLTAMKVGDDLFFLISGTADRLVVTGYSD 1136
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/407 (10%), Positives = 93/407 (22%), Gaps = 86/407 (21%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ +Y GDD + G + I + G N + + +
Sbjct: 1259 DRILAGDDADVVYGMDGDDQV----FGENGDDIISGGAGNDYVSGGAGNDVVISQSGNDF 1314
Query: 271 VVGSSGNDV-----------VIGNSANNVFFESSG-------------NDVFDGSSGLDT 306
+ G + +D + N + G ND+ G +T
Sbjct: 1315 IDGGADDDTYYISPSCGTVTIKDTEGKNTIVCADGLESTKIKAYRLDWNDLLIVFEGTET 1374
Query: 307 ---------------FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---------- 341
F L + ++ + ++ + +
Sbjct: 1375 SIVIKNYCINEDARGFRLIFADGLVEYATASGGVLRTINDWEGTEYHTSIYTDGTTIVAE 1434
Query: 342 ---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++L ++ + + + + + L G D+ + +G
Sbjct: 1435 NGDDQLNGSEASDNLIGGDGNNRIAGNGGDDYLDGGKGTDMLYGGAGADVYIYQKGYGTD 1494
Query: 399 F------------------DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
D Y ++++L + A + + F
Sbjct: 1495 TISDAQGENIIEITGYGISDIKAYRTNWNNLTMILDGSGEAGLSDSG----ADKLIIENF 1550
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS---YLYLGSYDDLRN 497
+ ++ + + + FD Y D N
Sbjct: 1551 FVSDANRQYKVICDGSVFGITDFGSPCRTLYGTAGSDYML-GFDGGRMTYYGLDGADTLN 1609
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
GSD Y G + L A ++ L +
Sbjct: 1610 --GSDGTDVL--YGGTGDDRILGGNGNDCLLGEAGNDYLEGGAGNDT 1652
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 61/535 (11%), Positives = 130/535 (24%), Gaps = 87/535 (16%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
T + + D G G TI + +I G G
Sbjct: 998 YGYAENDTIIGSAGKDIIYGNAGDDQIEAGDGADTIYGGDGKDQIKAGDGDDILFGGAGA 1057
Query: 144 Y---PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM----VSDIVAV---QK 193
G D + + T + D + D S ++D+ A+
Sbjct: 1058 DILCGNKGNDYMFGEEGDDTYIFDKSDGVDVIEDNSGTSTIQFGEGIHLNDLTAMKVGDD 1117
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
++ G+ + + + D + ID T+S +
Sbjct: 1118 LFFLISGTADRLVVTGYSDNPERFIVYVGEDEVDVSDILTKTDAAELPQIDGETDSSPDV 1177
Query: 254 GGYEKNMT-----------------------IAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ ++ + I + G+ +D V ++ N F
Sbjct: 1178 TEEIPQIATPTDADASDDAMDSSAQASDKRDVSDNVNI--ISGTENSDAVFAENSKNFIF 1235
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ D G S D + + + +I ++A +VY + Q + +
Sbjct: 1236 AGAEYDYIVGGSNAD--YIFGDRDVDRILAGDDADVVYGMDGDDQ--------VFGENGD 1285
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS-----------EGRDITF 399
+ A + +I G D + + +S EG++
Sbjct: 1286 DIISGGAGNDYVSGGAGNDVVISQSGNDFIDGGADDDTYYISPSCGTVTIKDTEGKNTIV 1345
Query: 400 DSYL--------YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+ Y ++DL VF + + + E + + +
Sbjct: 1346 CADGLESTKIKAYRLDWNDLLIVFEGTETSIV--IKNYCINEDARGFRLIFADGLVEYAT 1403
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
+ + + H S + D + D +
Sbjct: 1404 ASGGVLRTINDWEGTEYHTSIY---------TDGTTIVAENGDDQLNGSEASDNLI---- 1450
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
D + + L AG D + +I+
Sbjct: 1451 --------GGDGNNRIAGNGGDDYLDGGKGTDMLYGGAGADVYIYQKGYGTDTIS 1497
Score = 46.7 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 42/383 (10%), Positives = 82/383 (21%), Gaps = 50/383 (13%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL-- 132
+ I S + + I+ D G T + +
Sbjct: 1280 FGENGDDIISGGAGNDYVSGGAGNDVVISQSGNDFIDGGADDDTYYISPSCGTVTIKDTE 1339
Query: 133 --GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+ + D+ + + + + + +D +
Sbjct: 1340 GKNTIVCADGLESTKIKAYRLDWNDLLIVFEGTETSIVIKNYCINEDARGFRLIFADGLV 1399
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT--- 247
N+ E TI GDD L+ + D N
Sbjct: 1400 EYATASGGVLRTINDWEGTEYHTSIYTDGTTIVAENGDDQLNGSEASDNLIGGDGNNRIA 1459
Query: 248 --ESWSSIGGYEKNMTIAQHTVIESVV--GSSGNDVVIGNSANNVF--FESSGNDV---- 297
+ G + + + + G D + N+ +D+
Sbjct: 1460 GNGGDDYLDGGKGTDMLYGGAGADVYIYQKGYGTDTISDAQGENIIEITGYGISDIKAYR 1519
Query: 298 ---------FDGSS-------GLDT-----FFYYAPSYLYKIYRFENAIIVYD------- 329
DGS G D FF + YK+ + + D
Sbjct: 1520 TNWNNLTMILDGSGEAGLSDSGADKLIIENFFVSDANRQYKVICDGSVFGITDFGSPCRT 1579
Query: 330 -ANEHKQDFLSDVERLRFA----DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D++ + R D +L + ++ G D
Sbjct: 1580 LYGTAGSDYMLGFDGGRMTYYGLDGADTLNGSDGTDVLYGGTGDDRILGGNGNDCLLGEA 1639
Query: 385 HFYEFGLSEGRDITFDSYLYLGS 407
G D + Y
Sbjct: 1640 GNDYLEGGAGNDTYYFGIGYGTD 1662
Score = 41.3 bits (95), Expect = 0.47, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 80/271 (29%), Gaps = 28/271 (10%)
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
H Y G + + D + + S ++ + + G + +Y
Sbjct: 1421 HTSIYTDGTTIVAENGDDQLNGSEASDNLIGGDGNNRIAGNGGDDY---LDGGKGTDMLY 1477
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN---YIDLNTESWSS 252
G G ++Y + TI D+ G++++++T G + N +
Sbjct: 1478 GG----AGADVYIY----QKGYGTDTISDAQGENIIEITGYGISDIKAYRTNWNNLTMIL 1529
Query: 253 IGGYEKNMTIAQHT--VIESVVGSSGN---DVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
G E ++ + +IE+ S N V+ S + S G++G D +
Sbjct: 1530 DGSGEAGLSDSGADKLIIENFFVSDANRQYKVICDGSVFGITDFGSPCRTLYGTAGSD-Y 1588
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
Y + A + D L + L A
Sbjct: 1589 MLGFDGGRMTYYGLDGADTL--NGSDGTDVLYG------GTGDDRILGGNGNDCLLGEAG 1640
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ L G D + + +S+ I
Sbjct: 1641 NDYLEGGAGNDTYYFGIGYGTDSISDNSGIN 1671
>gi|300690485|ref|YP_003751480.1| metalloprotease, Hemolysin-type calcium-binding region [Ralstonia
solanacearum PSI07]
gi|299077545|emb|CBJ50171.1| putative metalloprotease, Hemolysin-type calcium-binding region
[Ralstonia solanacearum PSI07]
Length = 2942
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/340 (13%), Positives = 95/340 (27%), Gaps = 10/340 (2%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ +TI+ G+DL+ + + S + N TI ++
Sbjct: 978 NPNGGGSETIFGGSGNDLIITSNGDCYVD----AGSGNSLVYAGAGNDTIFAGVGNSTIS 1033
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G+D + G S N++ +GN+ G SG DT + P V +
Sbjct: 1034 GGGGDDYIDGESGNHLIAGGAGNNTIFGGSGNDTIYAGVPDGASTGDINAGNNYVDAGSG 1093
Query: 333 HKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ F S + L V + + + + G D+ +
Sbjct: 1094 NSIVFGSAGNDTLMAGSGQDTLVAGNGNTTIYGGTGVDLIYGGSGNDLIYAGDGGTAGAA 1153
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+ + ++ +Y G D+ + + + Y + D
Sbjct: 1154 TTVVAGSGNTTIYGGLGVDVIYGGAGSDVIYVGDGGSAAQRSVVYAGSGDTTVYGGAGFD 1213
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
I+ + L T +S LY G+ D+ + +
Sbjct: 1214 EIHGGSGNDVLYAGDGGSVDAPTVVY--AGTGNSTLYGGAGVDILSASAAGSTLLV---G 1268
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
G + L ++ L + +G
Sbjct: 1269 GSGQETLLGGVGDDTLVAGTGNDSLDGGAGSNTYVFNSGF 1308
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/376 (13%), Positives = 105/376 (27%), Gaps = 27/376 (7%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ N + + +Y GDD +DL G N ++L + S
Sbjct: 2404 GNDTFVLNAVAGSRDVAQLGDGNNMVYGQDGDDEVDL---GAGDNTVNLGSGSNYIGSTQ 2460
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N ++ G + V +N+ +G D +G +T + S
Sbjct: 2461 SSN----AGNGNNAIYLGDGQNTVWLGDGDNILGVGTGRDWIHVGNGNNTLYAGRRSAND 2516
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVE-RLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
I + V + + + E ++ + + +
Sbjct: 2517 TIQFGDGNNTVTVGDGANAVTVGNGENKIWGGNGSNQINVGDGNDTIGLGNGNNIVKTGS 2576
Query: 376 GQDVFESMKHFYEFGLSEG-------------RDITFDSYLYLGSYDDLRNVFGSDRGAA 422
G + L EG R D+ Y+G+ ++ G +
Sbjct: 2577 GASSVSVGDGSNQLWLGEGANTISAGAGDNVIRGGNGDNAAYVGNGNNDVEFGGGNNTVG 2636
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
V G +A A S+ + A+ + + G +
Sbjct: 2637 LGT-GNSTVILGGGSNAIYAGHGTGSNTIFVGDGANVVTVADGANYINAGSGADHVYGGN 2695
Query: 483 FDSYLYLGSYDDLRNVFGSD-----RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
D+ ++LG+ D N+ + Y+ +G + A+ + L
Sbjct: 2696 GDNTIWLGNGVDTVNLGDGANSIHIWDGDSAVYVGNGNNQIALGRGNDAVSAGNGNNTLT 2755
Query: 538 NAFADAPDLVQAGKDH 553
++ + G +H
Sbjct: 2756 TGDGNSNIWMGTGNNH 2771
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/345 (12%), Positives = 94/345 (27%), Gaps = 9/345 (2%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + N + TI + + + G
Sbjct: 2474 GDGQNTVWLGDGDNILGVGTGRDWIHVGNGNNTLYAGRRSANDTIQFGDGNNTVTVGDGA 2533
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
NG ++G + + + + ++++ G + + +
Sbjct: 2534 NAVTVGNGENKIWGGNGSNQINVGDGNDTIGLGNGNNIVKTGSGASSVSVGDGSNQLWLG 2593
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI- 253
GA S G V + + +G +D GG N + L T + + I
Sbjct: 2594 EGANTISAG---AGDNVIRGGNGDNAAYVGNGNND----VEFGGGNNTVGLGTGNSTVIL 2646
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
GG + T ++ G +VV N SG D G +G +T +
Sbjct: 2647 GGGSNAIYAGHGTGSNTIFVGDGANVVTVADGANYINAGSGADHVYGGNGDNTIWLGNGV 2706
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ N+I ++D + + ++ + L ++
Sbjct: 2707 DTVNLGDGANSIHIWDGDSAVY-VGNGNNQIALGRGNDAVSAGNGNNTLTTGDGNSNIWM 2765
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
G + + G+ T + G+ +D
Sbjct: 2766 GTGNNHIQVGNGSNTIGVGSADGSTNTIQVGDGNNAIAVAAGTND 2810
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 51/449 (11%), Positives = 112/449 (24%), Gaps = 50/449 (11%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----------DLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ S I GG++ + D T+IGG N + + + +
Sbjct: 729 DDTLFGSSGNDLINAGGGNNQIYGAQAGAAQGGDDTIIGGDGNNVIHDGDGNIRVTVGNG 788
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
I ++V +G+D V NN + G DV +G + F L
Sbjct: 789 ANQIFLGDGANTLVMGTGSDYVAVGGGNNQIEGNGGRDVIVVGNGNNAIFANKKIDLASA 848
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+++ + + V+ ++ + +I G D
Sbjct: 849 IANRDSLSASGLQGD---------LIAVGNGNNTIVSGTGNDLVVVGGGNDVVILGPGND 899
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY-ITHGVKEGRNP 437
+ + + + + + HY G
Sbjct: 900 TVVGGEVASQIYAA------WSAQSVMSDASTGGQPSTGHFVNTVTHYQGLTTASSGGYM 953
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ + +A + + D G G +T + Y+ +
Sbjct: 954 PSAELSALLAQYPGIQPYNVDPNGNPNGGGSETIFGGSGNDLIITSNGDCYVDAGSGNSL 1013
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
V+ + G ++ + + + + +G D
Sbjct: 1014 VYAGAGNDTI--FAGVGNSTISGGGGDDYIDGESGNHLIAGGAGNNTIFGGSGND----- 1066
Query: 558 GYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMN 617
T Y + + + A +Y+ G G +G +
Sbjct: 1067 ----------------TIYAGVPDGASTGDINAGNNYVDAGSGNSIVFGSAGNDTLMAGS 1110
Query: 618 LSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ + + VDL G+
Sbjct: 1111 GQDTLVAGNGNTTIYGGTGVDLIYGGSGN 1139
Score = 44.8 bits (104), Expect = 0.054, Method: Composition-based stats.
Identities = 52/495 (10%), Positives = 118/495 (23%), Gaps = 43/495 (8%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
++ R ++ D G G + A G++ +Y+
Sbjct: 2183 STTTQADGSYVRTWTKTDGSTGTDIHHADGTGSGTVQYANGTYSTYTSTAQGVVTTLNYD 2242
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM--VSDIVAVQKIYGAPK 199
+ + +Y + + D T V + + +
Sbjct: 2243 ASGNQVSYAVAATDSAGNWLQTAYDLNGIKLSDQWTRTDGTTGSDVFNADGPVETKTSQT 2302
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G V Q D F++T S G D+ G + + S GG+
Sbjct: 2303 DAAGITTTTDTVTQSDGSFLRTWSKSDGSSGTDIRNADGSMS-----GTTDSPTGGHGTY 2357
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNS-ANNVFFESSG--NDVFDGSSGLDTFFYYAPSYLY 316
V ++ ++ + + G S N + N G G DTF A +
Sbjct: 2358 TDDGHGNVAHTLTATADDQTLAGTSAGVNALRADAAYSNVTLQGGPGNDTFVLNAVAGSR 2417
Query: 317 KIYRFENAIIVYDA--NEHKQDFLSDVERLRFADQCIDSVN------VKQRSILEYTASY 368
+ + + + + + D + + + + +
Sbjct: 2418 DVAQLGDGNNMVYGQDGDDEVDLGAGDNTVNLGSGSNYIGSTQSSNAGNGNNAIYLGDGQ 2477
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ G ++ + G + + + D ++ G++
Sbjct: 2478 NTVWLGDGDNILGVGTGRDWIHVGNGNNTLYAGR--RSANDTIQFGDGNNTVTVGDGANA 2535
Query: 429 HGVKEGRN---PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
V G N + D I + + G + +
Sbjct: 2536 VTVGNGENKIWGGNGSNQINVGDGNDTIGLGNGNNIVKTGSGASSVSVGDGSNQLWLGEG 2595
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
+ + G R + A + D+ +
Sbjct: 2596 ANTISAGA--------------------GDNVIRGGNGDNAAYVGNGNNDVEFGGGNNTV 2635
Query: 546 LVQAGKDHFSNFGYE 560
+ G G
Sbjct: 2636 GLGTGNSTVILGGGS 2650
>gi|270012816|gb|EFA09264.1| matrix metalloproteinase 2 [Tribolium castaneum]
Length = 701
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 65/206 (31%), Gaps = 48/206 (23%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETSIH 76
L Q W + + D+ ++P + V AL W++ LTF E
Sbjct: 182 LHGQKWPYTNLTWSLRSR-------DLMGMDPYQVRLVISKALDVWARHSKLTFTEVDSP 234
Query: 77 -SDI-----------KFISSNNG----YVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
+DI F G + P + + D+A +GT L
Sbjct: 235 KADILIFFVRGEHGDNFPFDGKGVILAHAFFPNGGHSIDVHFDADEAWTTVPNSDEGTNL 294
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
+ A HE GH+LGL H S + Y ++ +
Sbjct: 295 FNVAAHEFGHSLGLSH--------------------SSEEGALMYPWYKEMENGFDYELP 334
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNI 206
D + +Q +YGA L + I
Sbjct: 335 D----DDKLGIQALYGARTTRLWDRI 356
>gi|77460468|ref|YP_349975.1| hemolysin-type calcium-binding region [Pseudomonas fluorescens Pf0-1]
gi|77384471|gb|ABA75984.1| Hemolysin-type calcium-binding region protein [Pseudomonas
fluorescens Pf0-1]
Length = 1213
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 71/435 (16%), Positives = 129/435 (29%), Gaps = 29/435 (6%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ + ++ E + R + + ++ E + F N
Sbjct: 729 DIYYINGTGVNVIEAAGGGDDEVRTIMLNQTLAANV--ERLTYVGTGSFTGYGNASDNII 786
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
AD + G G T+ ++ + G G++
Sbjct: 787 TGGVGADTLFGGAGADQFFGGDGFDTVSYGDSAAGVTINTKTGVNTGIAAGDTYNGIEQI 846
Query: 153 YENDSFLTSVMSYFMPQDSMMDA----SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ V S + + D SF + + D+ A + G G +I
Sbjct: 847 RGSSYGDIFVGSAGVDRFDGGDGNDILSFAGENSGVTLDLSAAV-LTGIAAGDFYTSIEA 905
Query: 209 I------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + ++ GG D L G Y++ ++ ++
Sbjct: 906 FQGSAYADTFTGSNALRESFIGGGGADTLIGVGRGDSAWYVNSSSAVQVNLLTGTGVGGD 965
Query: 263 AQH---TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF--YYAPSYLYK 317
AQ T I+++VGS+ ND + GN N+ GND+ G G DT + + +
Sbjct: 966 AQGDVLTNIDNLVGSAFNDTLTGNGYANMLEGGDGNDILYGGDGSDTLYGHSFTNTGALA 1025
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + + D++ R D + + G
Sbjct: 1026 VPFATDNQADIIYGGNGDDYIIGYVR----DVGSVFYGEAGNDNITVISG--VADGGDGN 1079
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D + H YE G D LYL + D GSD + + EG
Sbjct: 1080 DTLMGLGHGYELRGGAGAD-----KLYLSASGDAYGGEGSDSYFVSSKTMVAIFDEGTTG 1134
Query: 438 DAFKALEYIASHEDL 452
L+ I S D+
Sbjct: 1135 IDIVTLKNIQSFNDV 1149
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 53/375 (14%), Positives = 104/375 (27%), Gaps = 26/375 (6%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
D L + D+ + ++ E + R L S ++ E +
Sbjct: 99 DVLTAQTSGNTLNGGAGDDIYYINGSGVNVIEAAGGGDDEVRTILLNHSLAANV--ERLT 156
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
F N AD + G G T+ ++ +
Sbjct: 157 YVGTGSFTGYGNALDNVITGGVGNDYLFGGAGADRFIGGAGNDTVSYGDSGVGVTINTKT 216
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G++ + S T + + S + Y + + V
Sbjct: 217 GVNTGIAAGDTYVGIEALQGSGSNDTFISGEAADQFYGSGGTDTIDYSGSSSGVTVSLVG 276
Query: 193 KIYGAPKGSLGNNIY--------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+ G + G+ ++ T+ GDD+ + G N I+
Sbjct: 277 GVAGVGGDAQGDKLWEFETVIGSSFNDVLTAQTSGNTLNGGAGDDIYY--INGSGVNVIE 334
Query: 245 LNTESWSSIGGYEKNMTIAQ--------HTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ N T+A T + G++ ++V+ G N+ F +G D
Sbjct: 335 AAGGGDDEVRTIMLNQTLAANVERLTYVGTGSFTGYGNALDNVITGGVGNDYLFGGAGAD 394
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
F G +G DT Y I A D +E L+ + ++
Sbjct: 395 RFIGGAGNDTVSYGDSGVGVAINTKTGVNTGIAAG----DTYVGIEALQGSGSNDTFISG 450
Query: 357 KQRSILEYTASYEDL 371
+ + + +
Sbjct: 451 EAADQFYGSGGTDTI 465
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 68/558 (12%), Positives = 137/558 (24%), Gaps = 38/558 (6%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
D L + D+ + ++ E + R + + ++ E +
Sbjct: 303 DVLTAQTSGNTLNGGAGDDIYYINGSGVNVIEAAGGGDDEVRTIMLNQTLAANV--ERLT 360
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
F N AD + G G T+ ++ +
Sbjct: 361 YVGTGSFTGYGNALDNVITGGVGNDYLFGGAGADRFIGGAGNDTVSYGDSGVGVAINTKT 420
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVM--SYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G++ + S T + + S + Y + + V
Sbjct: 421 GVNTGIAAGDTYVGIEALQGSGSNDTFISGEAADQFYGSGGTDTIDYSGSSSGVTVSLVG 480
Query: 193 KIYGAPKGSLGNNIY--------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+ G + G+ ++ + GDD+ + G N I+
Sbjct: 481 GVAGVGGDAQGDKLWEFETVIGSSFNDVLTAQTSGNILNGGAGDDIYY--INGTGVNVIE 538
Query: 245 LNTESWSSIGGYEKNMTIAQ--------HTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ N T+A T + G++ ++V+ G N+ F +G D
Sbjct: 539 AAGGGDDEVRTIMLNQTLAANVERLTYVGTGSFTGYGNALDNVITGGVGNDYLFGGAGAD 598
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
F G +G D Y I A D +E L+ + ++
Sbjct: 599 QFIGGAGNDIVSYGDSGVGVTINTKTGVNTGIAAG----DTYVGIEALQGSGSNDTFISG 654
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ + G D + +S + G
Sbjct: 655 EAADQFYGSG---------GTDTIDYSGSSSGVTVSLVGGVAGVGGDAQGDKLWEFETVI 705
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
T G + A ++ + + E
Sbjct: 706 GSSFNDVLTAQTSGNILNGGAGDDIYYINGTGVNVIEAAGGGDDEVRTIMLNQTLAANVE 765
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+V S Y + + + A + G + D F + Y S +
Sbjct: 766 RLTYVGTGS---FTGYGNASDNIITGGVGADTLFGGAGADQFFGGDGFDTVSYGDSAAGV 822
Query: 537 INAFADAPDLVQAGKDHF 554
+ A D +
Sbjct: 823 TINTKTGVNTGIAAGDTY 840
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/238 (15%), Positives = 72/238 (30%), Gaps = 15/238 (6%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G T+ + + + G +GND + G N++ +G D+ +G +G+DT Y
Sbjct: 3 VINGTSGTDTLVGTSSADELFGFAGNDSLSGGEGNDLLDGGAGADILNGGNGIDTASYAN 62
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-D 370
+ + + + + D L+ +E + + + L A +
Sbjct: 63 STAGVTVNLATGTGV---GADAQGDTLTSIEAVIGSSFNDVLTAQTSGNTLNGGAGDDIY 119
Query: 371 LIQVIGQDVFESMKHFY----------EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
I G +V E+ + R + + G + L NV G
Sbjct: 120 YINGSGVNVIEAAGGGDDEVRTILLNHSLAANVERLTYVGTGSFTGYGNALDNVITGGVG 179
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ G + Y S + + D + +G
Sbjct: 180 NDYL-FGGAGADRFIGGAGNDTVSYGDSGVGVTINTKTGVNTGIAAGDTYVGIEALQG 236
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 76/597 (12%), Positives = 146/597 (24%), Gaps = 79/597 (13%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ + ++ E + R + + ++ E + F N
Sbjct: 525 DIYYINGTGVNVIEAAGGGDDEVRTIMLNQTLAANV--ERLTYVGTGSFTGYGNALDNVI 582
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
AD + G G + ++ + G G++
Sbjct: 583 TGGVGNDYLFGGAGADQFIGGAGNDIVSYGDSGVGVTINTKTGVNTGIAAGDTYVGIEAL 642
Query: 153 YENDSFLTSVM--SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY--- 207
+ S T + + S + Y + + V + G + G+ ++
Sbjct: 643 QGSGSNDTFISGEAADQFYGSGGTDTIDYSGSSSGVTVSLVGGVAGVGGDAQGDKLWEFE 702
Query: 208 -----KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ GDD+ + G N I+ + N T+
Sbjct: 703 TVIGSSFNDVLTAQTSGNILNGGAGDDIYY--INGTGVNVIEAAGGGDDEVRTIMLNQTL 760
Query: 263 AQ--------HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
A T + G++ ++++ G + F +G D F G G DT Y +
Sbjct: 761 AANVERLTYVGTGSFTGYGNASDNIITGGVGADTLFGGAGADQFFGGDGFDTVSYGDSAA 820
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE----- 369
I A D + +E++R + V + +
Sbjct: 821 GVTINTKTGVNTGIAAG----DTYNGIEQIRGSSYGDIFVGSAGVDRFDGGDGNDILSFA 876
Query: 370 -------------DLIQVIGQDV------FESMKHFYEFGLSE--------GRDITFDSY 402
L + D F+ + F S G
Sbjct: 877 GENSGVTLDLSAAVLTGIAAGDFYTSIEAFQGSAYADTFTGSNALRESFIGGGGADTLIG 936
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
+ G N + + G +G L A ++ L
Sbjct: 937 VGRGDSAWYVNSSSAVQVNLLTGTGVGGDAQGDVLTNIDNLVGSAFNDTLTGNGYANMLE 996
Query: 463 VQVGKD--------------HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
G D F+N G F T + + + + G R +
Sbjct: 997 GGDGNDILYGGDGSDTLYGHSFTNTGALAVPFATDNQADIIYGGNGDDYIIGYVRDVGSV 1056
Query: 509 HYITHGVKE-------GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
Y G D L + +L + A D + G
Sbjct: 1057 FYGEAGNDNITVISGVADGGDGNDTLMGLGHGYELRGGAGADKLYLSASGDAYGGEG 1113
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 60/420 (14%), Positives = 107/420 (25%), Gaps = 33/420 (7%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+ + AD+ G G T N+ + L +
Sbjct: 26 AGNDSLSGGEGNDLLDGGAGADILNGGNGIDTASYANSTAGVTVNLATGTGVGADAQGDT 85
Query: 147 YGVDNDYENDSFLT--SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
SF + + + Y V+ I A G +
Sbjct: 86 LTSIEAVIGSSFNDVLTAQTSGNTLNGGAGDDIYYINGSGVNVIEAAGG--GDDEVRTIL 143
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + + ++ T +G + LD + GGV N G N T++
Sbjct: 144 LNHSLAANVERLTYVGTGSFTGYGNALDNVITGGVGNDYLFGGAGADRFIGGAGNDTVSY 203
Query: 265 H---------------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
T I + G + + G+ +N+ F D F GS G DT Y
Sbjct: 204 GDSGVGVTINTKTGVNTGIAAGDTYVGIEALQGSGSNDTFISGEAADQFYGSGGTDTIDY 263
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S + + + D L + E + + + L A +
Sbjct: 264 SGSSSGVTVSLVGGVAG--VGGDAQGDKLWEFETVIGSSFNDVLTAQTSGNTLNGGAGDD 321
Query: 370 -DLIQVIGQDVFESMKHFY----------EFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
I G +V E+ + R + + G + L NV
Sbjct: 322 IYYINGSGVNVIEAAGGGDDEVRTIMLNQTLAANVERLTYVGTGSFTGYGNALDNVITGG 381
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
G + G + Y S + + D + +G
Sbjct: 382 VGNDYL-FGGAGADRFIGGAGNDTVSYGDSGVGVAINTKTGVNTGIAAGDTYVGIEALQG 440
Score = 42.5 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 75/542 (13%), Positives = 139/542 (25%), Gaps = 74/542 (13%)
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G G T + + I +G + G G ND+ + ++
Sbjct: 363 GTGSFTGYGNALDNVITGGVGNDYLFGGAGADRFIGG---AGNDTVSYGDSGVGVAINTK 419
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
+ G A I A+Q Y SGG D +D
Sbjct: 420 TGVNTGIAAGDTYVGIEALQGS-------------GSNDTFISGEAADQFYGSGGTDTID 466
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ + + + E+V+GSS NDV+ ++ N+
Sbjct: 467 YSGSSSGVTVSLVGGVAGVGGDAQGDKLW-----EFETVIGSSFNDVLTAQTSGNILNGG 521
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+G+D+ +Y + + I Q ++VERL +
Sbjct: 522 AGDDI----------YYINGTGVNVIEAAGGGDDEVRTIMLNQTLAANVERLTY------ 565
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
A + +G D +F G DI +G + +
Sbjct: 566 --VGTGSFTGYGNALDNVITGGVGNDYLFGGAGADQFIGGAGNDIVSYGDSGVGVTINTK 623
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ A + ++ + D F + E A D+ +
Sbjct: 624 TGVNTGIAAGDTYVGIEALQGSGSNDTFISGE---------AADQFYGSGGTDTIDYSGS 674
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
V + + + D F + G++ L S
Sbjct: 675 SSGVTVSLVGGVAGVGGDAQGDKLWEFETVIGSSF----------------NDVLTAQTS 718
Query: 533 HEDLINAFADAPDLVQAGKDHFSNF---GYEEGRSITFNPDLYLTSYDDLWNVFGSDRSA 589
L D + + G +E R+I N L + + G+
Sbjct: 719 GNILNGGAGDDIYYINGTGVNVIEAAGGGDDEVRTIMLNQT--LAANVERLTYVGTGSFT 776
Query: 590 AAQHYITHGMKEGRA-----LGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYF 644
+ + + G G QF S + ++ + K
Sbjct: 777 GYGNASDNIITGGVGADTLFGGAGADQFFGGDGFDTVSYGDSAAGVTINTKTGVNTGIAA 836
Query: 645 GD 646
GD
Sbjct: 837 GD 838
>gi|113475690|ref|YP_721751.1| RTX toxins and related Ca2+-binding protein [Trichodesmium erythraeum
IMS101]
gi|110166738|gb|ABG51278.1| RTX toxins and related Ca2+-binding protein [Trichodesmium erythraeum
IMS101]
Length = 1363
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/420 (13%), Positives = 108/420 (25%), Gaps = 17/420 (4%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+T + I + + ++ D D+ G + +
Sbjct: 703 TDTLTGGEGDDIINGGADNDDIKGEAGDDKLFGGDGDDLVSGAEGNDLLKGDGGTDTLTG 762
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--SDI 188
G +G + G +D + + + + ++ G DI
Sbjct: 763 GEGNDIIAGGDGDDDIKGEADDDKLFGGKGNDLVSGGEGNDLLRGDGGNDTLSGGEGDDI 822
Query: 189 VAVQKIYGAPKGSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+A + KG GNN + + GG D L G + ID
Sbjct: 823 IAGGEGNDEIKGETGNNQLFAGEGNDLVSSAEGNDLLRGDGGADTLTA---GEGDDTIDG 879
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ I G + + ++V+G+ GND++ G+ N+ G+D+ G G D
Sbjct: 880 GAD-NDDIKGEAGDDKLFGGDGDDTVLGAEGNDLLRGDGGNDTLSGGEGDDIIAGGDGDD 938
Query: 306 TFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVK 357
+A + E ++ + + D
Sbjct: 939 EIKGETGNNKLFAGEGNDLVSSAEGNDLLRGDGGADTLTAGEGDDTIDGGADNDDIKGEA 998
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L + ++ G D+ EG DI + N
Sbjct: 999 GDDQLFGGDGDDIVLGAEGNDLLRGDGGNDTLTGGEGDDIIAGGEGNDEIKGETGNNQLF 1058
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
G R + L + L D + G D +
Sbjct: 1059 AGKGNDLVSSAEGNDLLRGDEGNDTLTAGGGDDKLFGGDGDDELTGEAGDDQLFAAEGND 1118
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/476 (12%), Positives = 117/476 (24%), Gaps = 28/476 (5%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ + D+ + G T+ I G ++ D D
Sbjct: 519 GGDGDDLVSGAEGNDLLKGDGGTDTLTGGEGDDIIAGGDGDDDIKGEADNDKLFAGDGDD 578
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ + + G +D ++ G K G+ +
Sbjct: 579 LVSGGEGNDLLTGDGGTDTLTGGEGDDIINGGADNDDIKGEAGDDKLFGGD----GDDLV 634
Query: 214 KDSPFIQTIYDSGGDDLLD-----LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + GG D L + GG + + + + ++
Sbjct: 635 SGAEGNDLLKGDGGTDTLTGGEGDDIIAGGDGDDDIKGEADNDKLFAGDGDDLVSGGEGN 694
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G G D + G +++ + ND G +G D F + E ++
Sbjct: 695 DLLTGDGGTDTLTGGEGDDIINGGADNDDIKGEAGDDKLF--GGDGDDLVSGAEGNDLLK 752
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQ---RSILEYTASYEDLIQVIGQDVFESMKH 385
+ D L+ E ++K L + + G D+
Sbjct: 753 --GDGGTDTLTGGEGNDIIAGGDGDDDIKGEADDDKLFGGKGNDLVSGGEGNDLLRGDGG 810
Query: 386 FYEFGLSEGRDIT-----FDSYLYLGSYDDLRNVFGSDRGAAARHY----ITHGVKEGRN 436
EG DI D + L G+D ++A G
Sbjct: 811 NDTLSGGEGDDIIAGGEGNDEIKGETGNNQLFAGEGNDLVSSAEGNDLLRGDGGADTLTA 870
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ ++ A ++D+ D G D + + G D
Sbjct: 871 GEGDDTIDGGADNDDIKGEAGDDKLFGGDGDDTVLGAEGNDLLRGDGGNDTLSGGEGDDI 930
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G G + + + ++ L G D
Sbjct: 931 IAGGDGDDEIK---GETGNNKLFAGEGNDLVSSAEGNDLLRGDGGADTLTAGEGDD 983
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/331 (14%), Positives = 85/331 (25%), Gaps = 10/331 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + S+ R D + D G I ++ G
Sbjct: 842 FAGEGNDLVSSAEGNDLLRGDGGADTLTAGEGDDTIDGGADNDDIKGEAGDDKLFGGDGD 901
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + G + + D + G + +
Sbjct: 902 DTVLGAEGNDLLRGDGGNDTLSGGEGDDIIAGGDGDDEIKGETGNNKLF-AGEGNDLVSS 960
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTES 249
G+ TI +D + D L GG + I L E
Sbjct: 961 AEGNDLLRGD---GGADTLTAGEGDDTIDGGADNDDIKGEAGDDQLFGGDGDDIVLGAEG 1017
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G N T+ + + G GND + G + NN F GND+ + G D
Sbjct: 1018 NDLLRGDGGNDTLTGGEGDDIIAGGEGNDEIKGETGNNQLFAGKGNDLVSSAEGNDLLRG 1077
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + + + + + ++L A+ + +L+ +
Sbjct: 1078 DEGNDT-LTAGGGDDKLFGGDGDDELTGEAGDDQLFAAEGNDLISGGEGNDLLKGEGGND 1136
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
L G D E G D+
Sbjct: 1137 TLSGGEGDDTIFGCHGSDEIKGDAGDDLIIS 1167
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 42/371 (11%), Positives = 81/371 (21%), Gaps = 33/371 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
I GDD + G N + + G E N +
Sbjct: 377 GGTDTLTGGEGDDIIAGGDGDDEIK----GEADNDKLFAGDGDDLVSGGEGNDLLKGDGG 432
Query: 268 IESVVGSSG------------------NDVVIGNSANNVFFESSGNDVFDGSSGLDTF-- 307
+++ G G ND + +++ GND+ G G DT
Sbjct: 433 TDTLTGGEGDDIIAGGDGDDDIKGEADNDKLFAGDGDDLVSGGEGNDLLTGDGGTDTLTG 492
Query: 308 -----FYYAPSYLYKIYRFENAIIVYDANEHK-QDFLSDVERLRFADQCIDSVNVKQRSI 361
+ I ++ + + L+ + I
Sbjct: 493 GEGDDIINGGADNDDIKGEAGDDKLFGGDGDDLVSGAEGNDLLKGDGGTDTLTGGEGDDI 552
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ +D+ D + EG D+ + +
Sbjct: 553 IAGGDGDDDIKGEADNDKLFAGDGDDLVSGGEGNDLLTGDGGTDTLTGGEGDDIINGGAD 612
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
G + D + ++ L G D + ++
Sbjct: 613 NDDIKGEAGDDKLFGGDGDDLVSGAEGNDLLKGDGGTDTLTGGEGDDIIAGGDGDDDIKG 672
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 541
D+ D G G + + A ++D+
Sbjct: 673 EADNDKLFAGDGDDLVSGGEGNDLLT---GDGGTDTLTGGEGDDIINGGADNDDIKGEAG 729
Query: 542 DAPDLVQAGKD 552
D G D
Sbjct: 730 DDKLFGGDGDD 740
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 48/297 (16%), Positives = 84/297 (28%), Gaps = 9/297 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + I GDD L GG + + L E + G + T++
Sbjct: 225 GNDRLLGVEVNEEIKGKAGDDKL----FGGGGDDLVLGGEGKDFLRGDGGHDTLSGGEGD 280
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G G+D + G + ++ F GND+ G G D + E I+
Sbjct: 281 DIIDGGDGDDDIKGEAGDDKLFGGKGNDLVSGKEGNDLLRGDG--GTDTLTGGEGDDIIN 338
Query: 329 DANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
++ + ++L D + +L+ + L G D+
Sbjct: 339 GGADNDDIKGEAGDDKLFGGDGDDLVSGAEGNDLLKGDGGTDTLTGGEGDDIIAGGDGDD 398
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
E D F N G G D ++ A
Sbjct: 399 EIKGEADNDKLFAGDGDDLVSGGEGNDLLKGDGGTDTLTGGEGDDIIAGGDGDDDIKGEA 458
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYDDLRNVFGSD 502
++ L D G D + G + D DD++ G D
Sbjct: 459 DNDKLFAGDGDDLVSGGEGNDLLTGDGGTDTLTGGEGDDIINGGADNDDIKGEAGDD 515
>gi|332559588|ref|ZP_08413910.1| hemolysin-type calcium-binding region; RTX toxin [Rhodobacter
sphaeroides WS8N]
gi|332277300|gb|EGJ22615.1| hemolysin-type calcium-binding region; RTX toxin [Rhodobacter
sphaeroides WS8N]
Length = 437
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 79/294 (26%), Gaps = 14/294 (4%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
D+ R G G + + G G + G D D
Sbjct: 74 GNDQLYGNGGNDLVRGGGGADILTGGTGNDLLAGGAGNDSLHGGTGANLLIGGAGDDLLD 133
Query: 157 SFLTSVM-SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
S ++ + ++ A G D + G+ + +
Sbjct: 134 SRWSTDPDRGGLSFETWRAAKIGTGDEMHGGDGNDRIEASFGNDTLTGD---AGDDVIRG 190
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ G D L +G + E S+ G + + + ++G +
Sbjct: 191 QDGDDQLEGGEGQDTL----MGDAGADVLSGGEGDDSLDGGLGDDRLDGGEGSDRLIGGN 246
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GNDV+ G +A +V F G+D G D L + ++ + +
Sbjct: 247 GNDVMDGGAARDVLFGGYGDDRITAGEGDDWVDGGGGDDLIDLGAGDDFVAAIEDLGRGD 306
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D + E + + ++ + L G D F
Sbjct: 307 DVIFGGE------GNDTMLGGRGCDQIDGGEGADVLNGGAGDDFLTGGAGADAF 354
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/347 (13%), Positives = 88/347 (25%), Gaps = 22/347 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
E P+ + + G DLL + G L + G N + +
Sbjct: 29 FESALIAPPWGAPMMGNCGRDLLIASPFGSSL----LGGPEGDVLVGLWGNDQLYGNGGN 84
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ V G G D++ G + N++ +GND G +G + + + +
Sbjct: 85 DLVRGGGGADILTGGTGNDLLAGGAGNDSLHGGTGANLLI--GGAGDDLLDSRWSTDPDR 142
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ + + + +E + + L G DV +
Sbjct: 143 GGLSFETWRAAKI------GTGDEMHGGDGNDRIEASFGNDTLTGDAGDDVIRGQDGDDQ 196
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
EG+D D+ + D G + L
Sbjct: 197 LEGGEGQDTLMGDA-----GADVLSGGEGDDSLD----GGLGDDRLDGGEGSDRLIGGNG 247
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
++ + A G D + ++ L D D G
Sbjct: 248 NDVMDGGAARDVLFGGYGDDRITAGEGDDWVDGGGGDDLIDLGAGDDFVAAIEDLGRGDD 307
Query: 509 H-YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ G ++ + L D AG D F
Sbjct: 308 VIFGGEGNDTMLGGRGCDQIDGGEGADVLNGGAGDDFLTGGAGADAF 354
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 78/266 (29%), Gaps = 5/266 (1%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ GDDLLD + + L+ E+W + + +
Sbjct: 110 GNDSLHGGTGANLLIGGAGDDLLD-SRWSTDPDRGGLSFETWRAAKIGTGD-EMHGGDGN 167
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + S GND + G++ ++V G+D +G G DT + + E +
Sbjct: 168 DRIEASFGNDTLTGDAGDDVIRGQDGDDQLEGGEGQDTLM--GDAGADVLSGGEGDDSLD 225
Query: 329 DA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + D +RL + R +L + + G D +
Sbjct: 226 GGLGDDRLDGGEGSDRLIGGNGNDVMDGGAARDVLFGGYGDDRITAGEGDDWVDGGGGDD 285
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
L G D D + G+D R EG + A +
Sbjct: 286 LIDLGAGDDFVAAIEDLGRGDDVIFGGEGNDTMLGGRGCDQIDGGEGADVLNGGAGDDFL 345
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNF 473
+ +AF FS+
Sbjct: 346 TGGAGADAFQMRSAHGIDTIADFSSA 371
>gi|109097139|ref|XP_001111542.1| PREDICTED: matrix metalloproteinase-19 isoform 1 [Macaca mulatta]
Length = 485
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 51/161 (31%), Gaps = 38/161 (23%)
Query: 51 AQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRYDSRYF---------- 99
A+ R A +WS V LTF E + +DI+ +
Sbjct: 102 ARAALRQAFQDWSNVAPLTFREVQAGGADIRLSFHGRQSLYCSNSFDGPGRVLAHADIPE 161
Query: 100 -MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
++FD+ + W G +G L A HE+GHALGL H
Sbjct: 162 LGSVHFDEDEFWTEGTYRGVNLRIIAAHEVGHALGLGH---------------------- 199
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
Y + + + D+ +Q +YG
Sbjct: 200 ----SRYSQALMAPVYQGYQPHFKLHPDDVAGIQALYGKKS 236
>gi|307321266|ref|ZP_07600667.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
gi|306893076|gb|EFN23861.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
Length = 412
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 46/125 (36%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
Q+ + ++ G D + + S ++ G I + ++
Sbjct: 260 ETQQSYTITVVVSNASGSFTKDFVIGVTDVIETIVGNSSSQTMMGGIGADKIMAGSGNDT 319
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G++G+D++ G N+ +G D DG +G DT Y + + K + DA
Sbjct: 320 LIGNAGDDLLFGELGNDTILGGAGKDRLDGGAGNDTASYESATAGVKASLAAKSTNTNDA 379
Query: 331 NEHKQ 335
Sbjct: 380 AGDSY 384
Score = 45.2 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y I V ++ T G + T++G + + I N T+ +
Sbjct: 265 YTITVVVSNASGSFTKDFVIGVTDVIETIVGNSSSQTMMGGIGADKIMAGSGNDTLIGNA 324
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ + G GND ++G + + +GND
Sbjct: 325 GDDLLFGELGNDTILGGAGKDRLDGGAGNDT 355
Score = 44.4 bits (103), Expect = 0.064, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 30/134 (22%), Gaps = 12/134 (8%)
Query: 306 TFFYYAPSYLYK---IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
T S + + + I N Q + + + L
Sbjct: 268 TVVVSNASGSFTKDFVIGVTDVIETIVGNSSSQTMMGGI-------GADKIMAGSGNDTL 320
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
A + L +G D G D G L + AA
Sbjct: 321 IGNAGDDLLFGELGNDTILGGAGKDRLDGGAGNDTASYESATAGVKASLAAKSTNTNDAA 380
Query: 423 ARHYITHGVKEGRN 436
Y +G+ N
Sbjct: 381 GDSY--YGIDNHGN 392
>gi|116252708|ref|YP_768546.1| cation-binding protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115257356|emb|CAK08451.1| putative calcium-binding cadherin-like RTX protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 929
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/287 (16%), Positives = 79/287 (27%), Gaps = 10/287 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+D I +G T ++ D D G+G I +I +
Sbjct: 439 TGTDGNDIFDGSGGNDTINGNAGNDKLTGGDGNDQIFGGVGNDVIKGGAGDDKITDGDNM 498
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G D + + + D P + +
Sbjct: 499 STAPEAFDIDAGDGDDAI----NLQSHSSALSGVIDGGAGTDTLQVIKPTLGPGQESMGL 554
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G ++ + ++ D + L + + +
Sbjct: 555 AGFTIKNVEILETAGAEVLASAAQFESFDK---IVKYDKPGYENDVLALTLTDSAHADLS 611
Query: 255 GYEKN--MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
N + I V G+D G N+ F +GNDV G +G+DT +
Sbjct: 612 DELANRHVDIFGTAFGIDVKTGGGHDYFFGTGGNDRFEGGAGNDVLLGGAGIDTAVFSGN 671
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
Y + N + + +D L+DVE RFAD D K
Sbjct: 672 FAKY-TFALNNGSHILTSALEGKDTLTDVEFARFADGVYDFAKGKFT 717
Score = 58.3 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 63/453 (13%), Positives = 121/453 (26%), Gaps = 27/453 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
S + T D+ G T+ + EI +G
Sbjct: 62 GSSGPNTITTGAGNDTIVSGGGADTLSGGAGNDLLNGEAGNDTLNGGDGNDEIYGGVGND 121
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + D DY +D T + D ++ + + D A
Sbjct: 122 VLKGGAGNDTI--SDGDYFSDVAETFNIDAGDGNDKVILFTGSFAKISGTIDGGAGTDTL 179
Query: 196 GAPKGS---------LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-DL 245
A + L + I +G D + L L G + D
Sbjct: 180 QANDLTGLTIKNVEILQPATSSVTASTAQFESFDKIIGTGSDSSVQLVLTDGAHVDLSDE 239
Query: 246 NTESWSSIGGYEK--NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ I G + + + + + G++GND+ N+ + GND G G
Sbjct: 240 LAGKLNYIFGGPNVSGIDVTTGSARDLLTGTAGNDIFDAGDGNDYINGNGGNDRLIGGKG 299
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D S L ++ + D ++ + + ID +
Sbjct: 300 DDVIVDGDVSSL-------SSEVFNIDAGDGNDIVTLQTQSQGLSGTIDGGTGIDTLRVS 352
Query: 364 YTAS----YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD- 418
A ++++ S F G F S + + D +V SD
Sbjct: 353 RLAGLTIKNFEILETNEYGFTGSSAQLESFDKISGTKDAFGSSIAILRLTDKAHVDLSDE 412
Query: 419 -RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ A + T + + ++ + + G D + +
Sbjct: 413 LGNSRASIFGTVSGIDVKTGAGDDIFTGTDGNDIFDGSGGNDTINGNAGNDKLTGGDGND 472
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
F + + G D + G + A +
Sbjct: 473 QIFGGVGNDVIKGGAGDDKITDGDNMSTAPEAF 505
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/285 (17%), Positives = 82/285 (28%), Gaps = 19/285 (6%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLD------LTLIGGVKNYIDLNTESWSSIGGYEK 258
++ + S T+ DS DL D ++ G +I
Sbjct: 24 DVIRNSAANPLSAVALTVSDSSVADLADELGSVSASVRGSSGPNTITTGAGNDTIVSGGG 83
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
T++ + + G +GND + G N+ + GNDV G +G DT Y
Sbjct: 84 ADTLSGGAGNDLLNGEAGNDTLNGGDGNDEIYGGVGNDVLKGGAGNDTI----SDGDYFS 139
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFA--DQCIDSVNVKQRSILEYTASYEDLIQVIG 376
E I K + D + ++ + T +++Q
Sbjct: 140 DVAETFNIDAGDGNDKVILFTGSFAKISGTIDGGAGTDTLQANDLTGLTIKNVEILQPAT 199
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG----VK 432
V S F F G L L +V SD A +YI G
Sbjct: 200 SSVTASTAQFESFDKIIGTGSDSSVQLVLTDG---AHVDLSDELAGKLNYIFGGPNVSGI 256
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ A L A ++ + G D ++
Sbjct: 257 DVTTGSARDLLTGTAGNDIFDAGDGNDYINGNGGNDRLIGGKGDD 301
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 60/422 (14%), Positives = 100/422 (23%), Gaps = 81/422 (19%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
TI GG D L GG N + ++ G + N I
Sbjct: 64 SGPNTITTGAGNDTIVSGGGADTL----SGGAGNDLLNGEAGNDTLNGGDGNDEIYGGVG 119
Query: 268 IESVVGSSGNDVVIGNSANN------VFFESSGND--------------VFDGSSGLDTF 307
+ + G +GND + + GND DG +G DT
Sbjct: 120 NDVLKGGAGNDTISDGDYFSDVAETFNIDAGDGNDKVILFTGSFAKISGTIDGGAGTDTL 179
Query: 308 FYY----------------APSYLYKIYRFENAIIVYDANEHK--QDFLSDVERLRFADQ 349
S +FE+ + Q L+D + +D+
Sbjct: 180 QANDLTGLTIKNVEILQPATSSVTASTAQFESFDKIIGTGSDSSVQLVLTDGAHVDLSDE 239
Query: 350 ---------------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
ID R +L TA + G D +G
Sbjct: 240 LAGKLNYIFGGPNVSGIDVTTGSARDLLTGTAGNDIFDAGDGNDYINGNGGNDRLIGGKG 299
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
D+ D + S + G + G+ + ++ L
Sbjct: 300 DDVIVDGDVSSLSSEVFNIDAGDGNDIVTLQTQSQGLSGTIDGGTGIDTLRVSRLAGLTI 359
Query: 455 AF----ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG-----SYDDLRNVFGSDRGA 505
+F G F S + + ++ DL + G+ R +
Sbjct: 360 KNFEILETNEYGFTGSSAQLESFDKISGTKDAFGSSIAILRLTDKAHVDLSDELGNSRAS 419
Query: 506 AARHY---------------ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
T G + A ++ L + G
Sbjct: 420 IFGTVSGIDVKTGAGDDIFTGTDGNDIFDGSGGNDTINGNAGNDKLTGGDGNDQIFGGVG 479
Query: 551 KD 552
D
Sbjct: 480 ND 481
Score = 52.5 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 69/607 (11%), Positives = 135/607 (22%), Gaps = 126/607 (20%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ G T + + D G G I + G
Sbjct: 70 TTGAGNDTIVSGGGADTLSGGAGNDLLNGEAGNDTLNGGDGNDEIYGGVGNDVLKGGAGN 129
Query: 135 MHPGSYNGGYPVYGVDN-DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ- 192
+ V N D + + + + + S T +D+ +
Sbjct: 130 DTISDGDYFSDVAETFNIDAGDGNDKVILFTGSFAKISGTIDGGAGTDTLQANDLTGLTI 189
Query: 193 ---KIYGAPKGSLGNNIYKIEV------QQKDSPFIQTIYDSGGDDLLD----------- 232
+I S+ + + E DS + D DL D
Sbjct: 190 KNVEILQPATSSVTASTAQFESFDKIIGTGSDSSVQLVLTDGAHVDLSDELAGKLNYIFG 249
Query: 233 ------LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
+ + G + T + N I + + ++G G+DV++ +
Sbjct: 250 GPNVSGIDVTTGSARDLLTGTAGNDIFDAGDGNDYINGNGGNDRLIGGKGDDVIVDGDVS 309
Query: 287 N------VFFESSGND-------------VFDGSSGLDTFF------------------- 308
+ GND DG +G+DT
Sbjct: 310 SLSSEVFNIDAGDGNDIVTLQTQSQGLSGTIDGGTGIDTLRVSRLAGLTIKNFEILETNE 369
Query: 309 --YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-------------CIDS 353
+ S + + + + L+D + +D+ ID
Sbjct: 370 YGFTGSSAQLESFDKISGTKDAFGSSIAILRLTDKAHVDLSDELGNSRASIFGTVSGIDV 429
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD---SYLYLGSYDD 410
I T + G D + +G D F + + G D
Sbjct: 430 KTGAGDDIFTGTDGNDIFDGSGGNDTINGNAGNDKLTGGDGNDQIFGGVGNDVIKGGAGD 489
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF-----ADAPDLVQV 465
+ G + A + + ++ D
Sbjct: 490 DKITDGDNMSTAPEAFDIDAGDGDDAINLQSHSSALSGVIDGGAGTDTLQVIKPTLGPGQ 549
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSY------------------DDLRNVFGSDRG--- 504
+ F + + L S +D+ + +D
Sbjct: 550 ESMGLAGFTIKNVEILETAGAEVLASAAQFESFDKIVKYDKPGYENDVLALTLTDSAHAD 609
Query: 505 ----AAARHYITHGVKEG------------RNPDAFKALEYIASHEDLINAFADAPDLVQ 548
A RH G G E A ++ L+ +
Sbjct: 610 LSDELANRHVDIFGTAFGIDVKTGGGHDYFFGTGGNDRFEGGAGNDVLLGGAGIDTAVFS 669
Query: 549 AGKDHFS 555
++
Sbjct: 670 GNFAKYT 676
>gi|258544110|ref|ZP_05704344.1| iron-regulated protein FrpA [Cardiobacterium hominis ATCC 15826]
gi|258520618|gb|EEV89477.1| iron-regulated protein FrpA [Cardiobacterium hominis ATCC 15826]
Length = 545
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 66/249 (26%), Gaps = 42/249 (16%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + G N I I G E + + ++++GS GND + G + +
Sbjct: 286 DDHIYGSKDNDIINGKGGNDVISGEEGDDELYGEDGNDNLIGSVGNDKLSGGAGEDSLNG 345
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G D G +G D L +
Sbjct: 346 GDGRDHLSGGAGNDELIDGEDDDQ----------------------------LHGNEGDD 377
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF-----YEFGLSEGRDITFDSYLY-- 404
+L + + L G D++ + F + GR + D
Sbjct: 378 KLYGGTGNDLLIGDSGNDVLSGSAGNDIYRFARGFGHDVINNYDGGLGRHDSIDFSDMNR 437
Query: 405 -------LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
G+ L + G ++ H+ + L++ A + + A
Sbjct: 438 SDFDIRREGNNLVLHSKDGKNQITVTNHFFNGWQIDSIRFADGTTLDHGAINSAVSTQNA 497
Query: 458 DAPDLVQVG 466
+ +
Sbjct: 498 PRGNYMHPA 506
Score = 39.4 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 51/338 (15%), Positives = 90/338 (26%), Gaps = 86/338 (25%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--------------DGSSGLD 305
+ +AQ T ++ V G+ NDV+I ++ N + G DV+ D +S D
Sbjct: 153 LNLAQGTPLKPVNGTDRNDVLISSADNELLAGKGGKDVYQFSRGFGHDLINNHDENSNQD 212
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-----------SDVERLRFADQCIDSV 354
+ + +Y + D L + +RFAD I +
Sbjct: 213 DVVTFTNMNRKDFLIMRDYTSLYLRSLSGTDELRIMGQFPANSKWRIGEIRFADGSILTA 272
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ +R + + T + + D+ EG D
Sbjct: 273 DEIERELQKTTEGDDHIYGSKDNDIINGKGGNDVISGEEGDD------------------ 314
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
E D L ++ L + G+DH S
Sbjct: 315 ------------------ELYGEDGNDNLIGSVGNDKLSGGAGEDSLNGGDGRDHLSGGA 356
Query: 475 CEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
+ D G+ D + G L + ++
Sbjct: 357 GNDELIDGEDDDQLHGNEGDDKLYGG---------------------TGNDLLIGDSGND 395
Query: 535 DLINAFADAPDLVQAGKDHFSNFGYEEG----RSITFN 568
L + + G H Y+ G SI F+
Sbjct: 396 VLSGSAGNDIYRFARGFGHDVINNYDGGLGRHDSIDFS 433
>gi|300866983|ref|ZP_07111654.1| hypothetical protein OSCI_3190010 [Oscillatoria sp. PCC 6506]
gi|300335018|emb|CBN56820.1| hypothetical protein OSCI_3190010 [Oscillatoria sp. PCC 6506]
Length = 296
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 58/197 (29%), Gaps = 9/197 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G D +D G N L ++ + G E +I +
Sbjct: 51 GNDNLYGGNSKDILNGNEGSDFID----GSKGNDFILGGKNNDILLGGEGQDSILGNRGQ 106
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S+ G ND++ GN ++ GND G D ++ +
Sbjct: 107 DSINGGEKNDLINGNQGDDFIDGGKGNDSLFGGKNND--VLIGSRGEDSLWGNLGDDTLC 164
Query: 329 DANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + + + + + K L + L +G D
Sbjct: 165 GSQANDYLSGNGNNDIIDGCGGNDTIYGGKGNDTLLGCGGDDILYGDLGNDTLIGDSGND 224
Query: 388 EF--GLSEGRDITFDSY 402
F G+ +G DI D
Sbjct: 225 VFVLGVGQGLDIIADFT 241
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 60/164 (36%), Gaps = 5/164 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +++ +D+L + L G + + +++ + G N I
Sbjct: 123 GDDFIDGGKGNDSLFGGKNNDVLIGSRGEDSLWGNLGDDTLCGSQANDYLSGNGNNDIID 182
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++ G GND ++G +++ + GND G SG D F L I F
Sbjct: 183 GCGGNDTIYGGKGNDTLLGCGGDDILYGDLGNDTLIGDSGNDVFVLGVGQGLDIIADFTK 242
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + ++ ++ A +S+ + ++L +
Sbjct: 243 GEDLLGLSGGLTFNQLNITQVESATLISNSIGGEVLALLSGVQA 286
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/239 (13%), Positives = 61/239 (25%), Gaps = 19/239 (7%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D+++ N I T + G + +++ G + D++ GN ++
Sbjct: 12 DNIIYSNNTSNNTNSIQFGTLENDAFHGRDSGNIFHAKLGNDNLYGGNSKDILNGNEGSD 71
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
S GND G D QD ++ E+
Sbjct: 72 FIDGSKGNDFILGGKNNDIL-------------LGGEGQDSILGNRGQDSINGGEK---- 114
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ ++ + L DV + + G D S
Sbjct: 115 --NDLINGNQGDDFIDGGKGNDSLFGGKNNDVLIGSRGEDSLWGNLGDDTLCGSQANDYL 172
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ N G Y G L ++ LI + ++ VG
Sbjct: 173 SGNGNNDIIDGCGGNDTIYGGKGNDTLLGCGGDDILYGDLGNDTLIGDSGNDVFVLGVG 231
>gi|66046305|ref|YP_236146.1| hemolysin-type calcium-binding region:haemolysin-type calcium
binding related [Pseudomonas syringae pv. syringae
B728a]
gi|63257012|gb|AAY38108.1| Hemolysin-type calcium-binding region:Haemolysin-type calcium
binding related [Pseudomonas syringae pv. syringae
B728a]
Length = 855
Score = 69.4 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 78/295 (26%), Gaps = 88/295 (29%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+V Q + T+ GGDD L ++ G N T+
Sbjct: 478 TEGNDVLQGEESVADTLNGLGGDDTLY-------------GLSGNDTLNGGAGNDTLYGG 524
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA- 324
+++ G +GND + G + + GND G +G DT+ +Y + I ++++
Sbjct: 525 AGADTLDGGAGNDTLYGGAGADTLDGGVGNDNLYGDAGNDTYLFYRGAGQDWISDYDSSA 584
Query: 325 -----------------------IIVYDANEHKQD----------FLSDVERLRFADQC- 350
+Y D + VE+++F+D
Sbjct: 585 GNLDVIRVSDSLTPADIQLSRSAYDLYVGIAGSADKLTVSGWFSNTSTQVEQIQFSDGTT 644
Query: 351 -------------------------------------IDSVNVKQRSILEYTASYEDLIQ 373
+ + IL A + L
Sbjct: 645 WGIDAIRAMSSGTASQGNDVLYGNDALADSLSGLDGDDEINGLGGNDILSGGAGNDRLYG 704
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
G D + G D+ G D+ N F D +
Sbjct: 705 DAGNDTLTGGTGNDQLDGGRGNDLY---QFERGDGQDVINDFDPDANTDVLQFGA 756
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 82/579 (14%), Positives = 135/579 (23%), Gaps = 125/579 (21%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ D + + G G + +G+ +
Sbjct: 19 YGTSANDILDGGAGNDRLSGGLGNDTYLFYRGMGQDTVTDFDWTVGNIDTIKVAADIAPA 78
Query: 144 YPVYGVDNDYENDSFLTSV--MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
D Y S + MS + A V DI ++ +
Sbjct: 79 DVTVSRDGTYLYLSIKGTTDKMSVTFFNNINYQVERVEFADGTVWDIDTLKTMTRGVASD 138
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ +Y D+ D L G N E + G E N T
Sbjct: 139 TADTLYG--------------------DVGDDVLDGLNGNDKLYGEEGNDLLSGGEGNDT 178
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T +++ G +GND + G+ ++ +GND GS G DT+ +Y I F
Sbjct: 179 LNGGTGNDTLNGGAGNDSLSGDDGDDTLDGGAGNDYLSGSRGNDTYLFYRGMGQDTISEF 238
Query: 322 EN---------------------------------AIIVYDANEHKQDFLSDVERLRFAD 348
+ + D VER+ FAD
Sbjct: 239 DTTAGNADTIKVAADIIPDDVVVRRENTDLYLSIKGTTDWMKIYSYTDSGYQVERVEFAD 298
Query: 349 QCI----------------------------DSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + A + L+ G D+
Sbjct: 299 GTVWSVSDLKRLSRVVASEGAETIYGDETSEQLDGLGGNDQIYGLAGNDVLLGGAGDDLL 358
Query: 381 ESMKHFYEFGLSEGR--------------------DITFDSYLYLGSYDDLRNVFGSDRG 420
+ G D+ D G+ D L+ G
Sbjct: 359 DGGMGLDTLDGGAGNDMLYGGSGNDTYLFQRGGGQDVINDRDWTAGNIDTLKLAPGIVST 418
Query: 421 AAARHYITHGVKEGRNPDAFK----ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ ++ + K Y A + FAD +
Sbjct: 419 DIKVSRAGNNLELAIIGTSDKITVRDWFYSADSQVEQVQFADGTLWDVATLNAMVKGVAT 478
Query: 477 EGRFV--------------TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
EG V D LY S +D N + Y G
Sbjct: 479 EGNDVLQGEESVADTLNGLGGDDTLYGLSGNDTLNGGAGNDTL----YGGAGADTLDGGA 534
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
L A + L + AG D + +
Sbjct: 535 GNDTLYGGAGADTLDGGVGNDNLYGDAGNDTYLFYRGAG 573
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 58/183 (31%), Gaps = 43/183 (23%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE- 322
T+ + G SG+D + G SAN++ +GND G G DT+ +Y + F+
Sbjct: 2 GDTMATIINGQSGDDWLYGTSANDILDGGAGNDRLSGGLGNDTYLFYRGMGQDTVTDFDW 61
Query: 323 -----------------------NAIIVYDANEHKQDFLS---------DVERLRFADQC 350
+ +Y + + D +S VER+ FAD
Sbjct: 62 TVGNIDTIKVAADIAPADVTVSRDGTYLYLSIKGTTDKMSVTFFNNINYQVERVEFADGT 121
Query: 351 IDSVNVKQR----------SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ ++ + L + L + G D + EG D
Sbjct: 122 VWDIDTLKTMTRGVASDTADTLYGDVGDDVLDGLNGNDKLYGEEGNDLLSGGEGNDTLNG 181
Query: 401 SYL 403
Sbjct: 182 GTG 184
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 71/556 (12%), Positives = 133/556 (23%), Gaps = 103/556 (18%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ + D G G T+ + + +GG + ND
Sbjct: 166 GNDLLSGGEGNDTLNGGTGNDTLNGGAGNDSLSGD---DGDDTLDGGAGNDYLSGSRGND 222
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV--------AVQKIYGAPKGSLGN-NIY 207
++L + + +DI+ +Y + KG+ IY
Sbjct: 223 TYLFYRGMGQDTISEFDTTAGNADTIKVAADIIPDDVVVRRENTDLYLSIKGTTDWMKIY 282
Query: 208 KIEVQQKDSPFIQ----TIYDSGGDDLLDLTLIGGVKNYIDLNT--------ESWSSIGG 255
++ T++ L + I + I G
Sbjct: 283 SYTDSGYQVERVEFADGTVWSVSDLKRLSRVVASEGAETIYGDETSEQLDGLGGNDQIYG 342
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------------DG 300
N + + + G G D + G + N++ + SGND +
Sbjct: 343 LAGNDVLLGGAGDDLLDGGMGLDTLDGGAGNDMLYGGSGNDTYLFQRGGGQDVINDRDWT 402
Query: 301 SSGLDTFFYYAP--SYLYKIYRFENAIIVYDANEHKQDFLSD--------VERLRFADQC 350
+ +DT S K+ R N + + + + D VE+++FAD
Sbjct: 403 AGNIDTLKLAPGIVSTDIKVSRAGNNLELAIIGTSDKITVRDWFYSADSQVEQVQFADGT 462
Query: 351 --------------------------------------IDSVNVKQRSILEYTASYEDLI 372
+ L A + L
Sbjct: 463 LWDVATLNAMVKGVATEGNDVLQGEESVADTLNGLGGDDTLYGLSGNDTLNGGAGNDTLY 522
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D + G D Y D N A + +I+
Sbjct: 523 GGAGADTLDGGAGNDTLYGGAGADTLDGGVGNDNLYGDAGNDTYLFYRGAGQDWISDYDS 582
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC--------------EEG 478
N D + + + + ++ A + G +G
Sbjct: 583 SAGNLDVIRVSDSLTPADIQLSRSAYDLYVGIAGSADKLTVSGWFSNTSTQVEQIQFSDG 642
Query: 479 RFVTFDSYLYLGSY--DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
D+ + S +V + A G E L A ++ L
Sbjct: 643 TTWGIDAIRAMSSGTASQGNDVLYGNDALADSLSGLDGDDEINGLGGNDILSGGAGNDRL 702
Query: 537 INAFADAPDLVQAGKD 552
+ G D
Sbjct: 703 YGDAGNDTLTGGTGND 718
>gi|220922698|ref|YP_002498000.1| hypothetical protein Mnod_2744 [Methylobacterium nodulans ORS 2060]
gi|219947305|gb|ACL57697.1| hypothetical protein Mnod_2744 [Methylobacterium nodulans ORS 2060]
Length = 133
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI---TFNPDLYLTSYDDLWN 581
Y+ ++D+ A A V+ K HF +GY EGR + YL Y D+
Sbjct: 43 DEQWYLERYQDVKAAIAA--GSVKTAKQHFVKYGYFEGRLPRPIEVDEVFYLREYPDVRA 100
Query: 582 VFGSDRS-AAAQHYITHGMKEGR 603
S A H+ T G +EGR
Sbjct: 101 AIESGEIPDATTHFHTAGAREGR 123
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 5/86 (5%)
Query: 484 DSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDAF--KALEYIASHEDLINAF 540
D YL Y D++ + A +H++ +G EGR P + Y+ + D+ A
Sbjct: 43 DEQWYLERYQDVKAAIAAGSVKTAKQHFVKYGYFEGRLPRPIEVDEVFYLREYPDVRAAI 102
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ HF G EGR
Sbjct: 103 ES--GEIPDATTHFHTAGAREGRIPY 126
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV---TFDSYLYLGSY 492
N Y+ ++D+ A A K HF +G EGR D YL Y
Sbjct: 38 NSVKVDEQWYLERYQDVKAAIAAGSVKT--AKQHFVKYGYFEGRLPRPIEVDEVFYLREY 95
Query: 493 DDLRNVFGSD-RGAAARHYITHGVKEGRNP 521
D+R S A H+ T G +EGR P
Sbjct: 96 PDVRAAIESGEIPDATTHFHTAGAREGRIP 125
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 5/90 (5%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGA-AARHYITHGVKEGRNPDA--FKALEYIASHED 451
+ D YL Y D++ + A +H++ +G EGR P + Y+ + D
Sbjct: 38 NSVKVDEQWYLERYQDVKAAIAAGSVKTAKQHFVKYGYFEGRLPRPIEVDEVFYLREYPD 97
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ A + HF G EGR
Sbjct: 98 VRAAIESG--EIPDATTHFHTAGAREGRIP 125
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG---RDITFDSYLYLG 406
I +VK + + V + +HF ++G EG R I D YL
Sbjct: 34 AIALNSVKVDEQWYLERYQDVKAAIAAGSVKTAKQHFVKYGYFEGRLPRPIEVDEVFYLR 93
Query: 407 SYDDLRNVFGSDRG-AAARHYITHGVKEGRNP 437
Y D+R S A H+ T G +EGR P
Sbjct: 94 EYPDVRAAIESGEIPDATTHFHTAGAREGRIP 125
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGR 603
S+ + YL Y D+ + A QH++ +G EGR
Sbjct: 39 SVKVDEQWYLERYQDVKAAIAAGSVKTAKQHFVKYGYFEGR 79
>gi|27382784|ref|NP_774313.1| hypothetical protein bll7673 [Bradyrhizobium japonicum USDA 110]
gi|27355957|dbj|BAC52938.1| bll7673 [Bradyrhizobium japonicum USDA 110]
Length = 465
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/322 (14%), Positives = 84/322 (26%), Gaps = 6/322 (1%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L G + + +I G + N T++ +++ G +GND + GN+ +
Sbjct: 42 DDVLPGTAADDQINGLQGNDTITGLDGNDTVSGGPGNDNIDGGAGNDTLDGNAGIDTIAG 101
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQC 350
G+D +G +G DT + + I+ + F + + + D
Sbjct: 102 GDGDDTINGGAGDDTL--NGNAGVDTIHGNAGIDTIDGGTGDDHLFGDAGDDSIHGGDGN 159
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
D L A + L G DV G D
Sbjct: 160 DDVHGGAGADTLWGDAGDDTLSGDAGNDVLNGGDGNDVLNGGLGDDTLNGDAGNDTLNGG 219
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L N + G D + A + + + G D
Sbjct: 220 LGNDLLNGGMGDDILNGGAGADTLNGGDGIDTMHGDAGDDLMDGGGGNDVMFGDAGDDLM 279
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
+ + G + + A G D +L
Sbjct: 280 AGGAGNDTMSGGNGDDELSGGAGNDTLNGDAGDDTLA---GGDGADVLNGGDGADSLSGG 336
Query: 531 ASHEDLINAFADAPDLVQAGKD 552
A ++ L D G D
Sbjct: 337 AGNDTLNGDAGDDELSGGNGAD 358
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 78/296 (26%), Gaps = 12/296 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + + TI+ + G D +D GG + SI G + N +
Sbjct: 113 GDDTLNGNAGVDTIHGNAGIDTID----GGTGDDHLFGDAGDDSIHGGDGNDDVHGGAGA 168
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS-----YLYKIYRFEN 323
+++ G +G+D + G++ N+V GNDV +G G DT A + L
Sbjct: 169 DTLWGDAGDDTLSGDAGNDVLNGGDGNDVLNGGLGDDTLNGDAGNDTLNGGLGNDLLNGG 228
Query: 324 AIIVYDANEHKQDFLSD---VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L+ ++ + ++ A + + G D
Sbjct: 229 MGDDILNGGAGADTLNGGDGIDTMHGDAGDDLMDGGGGNDVMFGDAGDDLMAGGAGNDTM 288
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
E G D + A G
Sbjct: 289 SGGNGDDELSGGAGNDTLNGDAGDDTLAGGDGADVLNGGDGADSLSGGAGNDTLNGDAGD 348
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
L + L D G D + F + + D+
Sbjct: 349 DELSGGNGADVLSGGLGDDVLTGGGGTDTHNFGDGTATNFGNDEVTDLSAADGDVV 404
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 50/432 (11%), Positives = 91/432 (21%), Gaps = 43/432 (9%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
D D G G I + G+ +G
Sbjct: 47 GTAADDQINGLQGNDTITGLDGNDTVSGGPGNDNIDGGAGNDTLDGNAGIDTIAGGDGDD 106
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ G D + + +D G + ++ G
Sbjct: 107 TINGGAGDDTLNGNAGVDTIHGNAGIDTIDGGTGDDHLFGDAGDDSIHGGDG-------- 158
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T++ GDD L G N + + + G + T+
Sbjct: 159 -----NDDVHGGAGADTLWGDAGDDTL----SGDAGNDVLNGGDGNDVLNGGLGDDTLNG 209
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------------F 308
+++ G GND++ G +++ +G D +G G+DT
Sbjct: 210 DAGNDTLNGGLGNDLLNGGMGDDILNGGAGADTLNGGDGIDTMHGDAGDDLMDGGGGNDV 269
Query: 309 YYAPSYLYKIYRFENAIIVYDA-------NEHKQDFLSDV---ERLRFADQCIDSVNVKQ 358
+ + + + D L+ + L D
Sbjct: 270 MFGDAGDDLMAGGAGNDTMSGGNGDDELSGGAGNDTLNGDAGDDTLAGGDGADVLNGGDG 329
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
L A + L G D G D+
Sbjct: 330 ADSLSGGAGNDTLNGDAGDDELSGGNGADVLSGGLGDDVLTGGGGTDTHNFGDGTATNFG 389
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
G + A + +D N D E
Sbjct: 390 NDEVTDLSAADGDVVHVDAPAGFDPATVVVDDDGTNTVLDFGFGTIQLDGVSGGATPFES 449
Query: 479 RFVTFDSYLYLG 490
++ Y
Sbjct: 450 IDDINNAAGYTA 461
Score = 53.3 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/367 (13%), Positives = 92/367 (25%), Gaps = 40/367 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
N + T D G TI + + I G
Sbjct: 82 DGGAGNDTLDGNAGIDTIAGGDGDDTINGGAGDDTLNGNAGVDTIHGNAGIDTIDGGTGD 141
Query: 135 MHPGSYNGGYPVYGVDN---------------DYENDSFLTSVMSYFMPQDSMMDASFGY 179
H G ++G D D +D+ + + D G
Sbjct: 142 DHLFGDAGDDSIHGGDGNDDVHGGAGADTLWGDAGDDTLSGDAGNDVLNGGDGNDVLNGG 201
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLT 234
++ + G L N + T+ G D + D
Sbjct: 202 LGDDTLNGDAGNDTLNGGLGNDLLNGGMG-DDILNGGAGADTLNGGDGIDTMHGDAGDDL 260
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ GG N + + G N T++ + + G +GND + G++ ++ G
Sbjct: 261 MDGGGGNDVMFGDAGDDLMAGGAGNDTMSGGNGDDELSGGAGNDTLNGDAGDDTLAGGDG 320
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
DV +G G D+ A + D LS +
Sbjct: 321 ADVLNGGDGADSL-------------SGGAGNDTLNGDAGDDELSG------GNGADVLS 361
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+L + G + ++G + D+ + +
Sbjct: 362 GGLGDDVLTGGGGTDTHNFGDGTATNFGNDEVTDLSAADGDVVHVDAPAGFDPATVVVDD 421
Query: 415 FGSDRGA 421
G++
Sbjct: 422 DGTNTVL 428
>gi|84495083|ref|ZP_00994202.1| type I secretion target repeat protein [Janibacter sp. HTCC2649]
gi|84384576|gb|EAQ00456.1| type I secretion target repeat protein [Janibacter sp. HTCC2649]
Length = 3687
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/508 (12%), Positives = 125/508 (24%), Gaps = 34/508 (6%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
++ V T + FD T+ A + LG
Sbjct: 2316 ADTDTNTVSTGTGSDTVYGSNGFDFVTTASTATQTATVFGGGAADVLTGGLGSDKIYGGP 2375
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G V +T V+ + DA +T ++ +IYG+
Sbjct: 2376 GDDYVVAAPATVSAPGAITDVLGSARDVAVLPDAGG---STKLLVGGTGSDRIYGSD--- 2429
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G + + + + + + L + N
Sbjct: 2430 -GPSTIFGDTTVDACDVQSNPVSAQPAETT----VSADAADLILGGNGVDVVNAGGGNDW 2484
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + G+SG D + A ++ F SG+D G G D + +Y
Sbjct: 2485 AYAAGASDRLCGNSGADHLYAGDAADLVFGGSGDDQAYGEDGPDQVY--GNDGADSLYGS 2542
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
A + E + +L + L+
Sbjct: 2543 TGADRLQGNAGSDW-VDGGSEADVLLGGTSVAGAADGGDVLLGAGGADVLVGDNAPSDVL 2601
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
S + + S D T YL + DD +G A Y G
Sbjct: 2602 SDQPYPTDLGS--TDATLGGADYLVAGDDDDRAYG--GLADDTVYGGLGNDVAEGNPGSD 2657
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
+ A +D+I + + G+ + D + + G+
Sbjct: 2658 GIWGEAGDDDIIGGSSQLASGTEQGRPDSGDT------LTGGDGQDVITGDNATVTRGGT 2711
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
A +T + + ++ ++ + Q G D +
Sbjct: 2712 AHAVMAGRGLTTPRGVDLADEGSGSPTGVSGNDLIDAGSGVDVVFAQRGNDTVTLG---- 2767
Query: 562 GRSITFNPDLYLTSYDDLWNVFGSDRSA 589
+ Y D +V G +
Sbjct: 2768 ------DGADYGEGGPDTDSVTGGAQDD 2789
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 57/474 (12%), Positives = 108/474 (22%), Gaps = 30/474 (6%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET 73
ADHL F D + + + +
Sbjct: 2500 ADHLYAGDAADLVFGGSGDDQAYGEDGPDQVYGNDGADSLYGSTGADRLQGNAGSDWVDG 2559
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI-LSHNALHEIGHAL 132
+D+ ++ + + ADV + ++G
Sbjct: 2560 GSEADVLLGGTSVAGAA-----DGGDVLLGAGGADVLVGDNAPSDVLSDQPYPTDLGSTD 2614
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV--A 190
+ Y D + + S G DI+ +
Sbjct: 2615 ATLGGADYLVAGDDDDRAYGGLADDTVYGGL--GNDVAEGNPGSDGIWGEAGDDDIIGGS 2672
Query: 191 VQKIYGAPKGS--LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
Q G +G G+ + + Q + T+ G + +DL E
Sbjct: 2673 SQLASGTEQGRPDSGDTLTGGDGQDVITGDNATVTRGGTAHAVMAGRGLTTPRGVDLADE 2732
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S G N I + ++ V GND V + D G + D
Sbjct: 2733 GSGSPTGVSGNDLIDAGSGVDVVFAQRGNDTVTLGDGADYGEGGPDTDSVTGGAQDDDVV 2792
Query: 309 YYA----------PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ + + ++ N +
Sbjct: 2793 GGSFTTASGEAGQADAGDTLTGGDGQDVITGDNAKVTRGGPAHPVMSGRGLTTTRGVDLA 2852
Query: 359 RSIL---EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF---DSYLYLGSYDDLR 412
+ + + DV + + L +G D D+ G D
Sbjct: 2853 DEGAGSPTGVSGNDVIDAGNDADVVFAQRGNDTVTLGDGADYGEGGPDADSISGGAQDDD 2912
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALE--YIASHEDLINAFADAPDLVQ 464
V GS + + G +G + A A + + + L P
Sbjct: 2913 VVGGSYTPGSEVSPLVIGQPDGGDTLAGDAGQDVVLGDNGSLTRPAGTPPVSPA 2966
Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 33/286 (11%), Positives = 66/286 (23%), Gaps = 30/286 (10%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D+ G +++D + + ++ A + + V G G D + + N
Sbjct: 2106 GSDGDDVIRTGVGTSWVDGGKGADTITTLDRTDLATAPGSAVAHVAGGQGPDAITVGNGN 2165
Query: 287 NVFFES------------------SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII-- 326
+V +G+ + +D+ A + + I
Sbjct: 2166 DVVAGDASLAHADSSPSVALSPDKAGSVTLTNAVKVDSTLTDAADADFYSANPTGSGIDQ 2225
Query: 327 -------VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI---LEYTASYEDLIQVIG 376
V + D + AD S Y A ++ G
Sbjct: 2226 IAAGLGQVRLSGNGGADTIGTANDSVLADSKGIKAGTTGGSAEKEALYRAQGSVIVGGAG 2285
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
DV +S I + D V +
Sbjct: 2286 SDVLKSGSATDTVYTGTFAAIGESDAGSGDADTDTNTVSTGTGSDTVYGSNGFDFVTTAS 2345
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
A + D++ + + D +
Sbjct: 2346 TATQTATVFGGGAADVLTGGLGSDKIYGGPGDDYVVAAPATVSAPG 2391
Score = 37.5 bits (85), Expect = 8.4, Method: Composition-based stats.
Identities = 50/343 (14%), Positives = 94/343 (27%), Gaps = 24/343 (6%)
Query: 10 TERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVA----RWALGEWSKV 65
+ AD + D + I P + D + ++ R + + V
Sbjct: 3164 ADGGADTIHGDVALAATEIVAAPAGAAWSTPAVDAAPVTAGQDDLTGGWGRQGYRDGNDV 3223
Query: 66 V----DLTFEETSIHSDI--KFISSNNGYVCTPRYDSRYFME--INFDKADVWRYGIGKG 117
+ + F + I V TPRY + + +
Sbjct: 3224 IHGDGNDDFV-VGDNGSIQRVVDGGTTDRVYTPRYGTSRLGQAKVRVAGGGASSTRFCPT 3282
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
T + + E+ A G +G +YG D Y +
Sbjct: 3283 TGSTTTSTCEVAGAFGSDTVFGDDGQDVLYGQDGGDNILGGADDDDIYGELGADTLFGED 3342
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
G ++ D +Q + S + + T D DL
Sbjct: 3343 G--EDAILGDRGGIQNRFETGSRSTTTTL-----TMPPAVSFTTRRDGSVSREADLLHDV 3395
Query: 238 GVKNYIDLNTESWSSIGGYE--KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+++ T + + G I +S+ +G+D+ G+S + F G
Sbjct: 3396 NGTDFVGGATSTPMPLNGITFGGADRIRGGAGHDSIHAGAGDDLANGDSGGDSLFGDRGK 3455
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
DV G +G Y + I + A +D +
Sbjct: 3456 DVMWGGAG--KVCTYTDALCLADAGTNGEFIDHIAGGKDEDVI 3496
>gi|240142877|ref|YP_002967390.1| putative peptidase [Methylobacterium extorquens AM1]
gi|240012824|gb|ACS44049.1| putative peptidase [Methylobacterium extorquens AM1]
Length = 1045
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 71/527 (13%), Positives = 133/527 (25%), Gaps = 92/527 (17%)
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+G + ++Y E + + T+ D+ GG D L+ + + + +
Sbjct: 513 FGGQHTADDLHVYTDEFRVYGAGTRATLRDADGGIDTLNASPVTTAIAFDLATGGTI--- 569
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD---------GSSGL 304
+ +++A TV+E+ V G+D + GN+A+N G+DV D G +G
Sbjct: 570 --AGRAVSVASGTVLENFVAGDGDDRITGNAADNRLLGGRGDDVLDGGAGRNRLEGGAGD 627
Query: 305 DTFFYYAPSYLYKIYRFENAI--------------IVYDANEHKQDFLSDVERLRFADQC 350
D F L ++ A +A D L+ +E++
Sbjct: 628 DVLFASGIDQLDGGEGYDTATWRNATSRIVIDMANQSRNAGAAAGDSLTGIEKIVGTAYG 687
Query: 351 IDSVNVKQRSILEYTASYE----------DLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ +E + L G D F EG D
Sbjct: 688 DEIHAGGGVVRIEAGGGNDVLHGDGVSGAVLSGEAGDDRFIGGAGGQVHDGGEGFDTVSF 747
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
G D + + A + G++ + + + + +
Sbjct: 748 ETARSGVTVDFADGSHNRGDAEGDTF--EGIEAVQGSRFDDVVRLAGTVRTVDAGAGNDV 805
Query: 461 DLVQVGKDHFSNFGCEE-----------GRFVTFDSYLYLGSY----------------- 492
D + D YL S
Sbjct: 806 VQGSAQADGIKGGEGADWIEGGAGADVLDGGAGIDWLSYLASGAAVRVDMVAGVCGGGDA 865
Query: 493 -DDLRNVFGSDRGAAARHYI-----------THGVKEGRNPDAFKALEYIASHEDLINAF 540
D + F + G+ + G E R L ++ L
Sbjct: 866 QGDRISNFENVTGSRFADVLFGNNAANTLEGNAGDDEIRGGGGADILRGGDGNDRLFGDD 925
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
+ AG + G + + F + G
Sbjct: 926 GSDMLVGGAGTN--RLTGGAGADLFQVSRIG-----MQIVEDFTRGQDRIYLQASEFG-S 977
Query: 601 EGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
+ F + + + F+ LY D G G
Sbjct: 978 ILADKRVGADDFAAGVRV---DFAGRHAGFFFETGSATLYFDADGQG 1021
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/451 (11%), Positives = 109/451 (24%), Gaps = 77/451 (17%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWS--------------- 63
R + + + D R +F L + L ++
Sbjct: 482 RGEESAGTWTVRIADSAVGTRGTFTGASLTAFGGQHTADDLHVYTDEFRVYGAGTRATLR 541
Query: 64 ------KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
++ + T+I D+ + G + + + D D
Sbjct: 542 DADGGIDTLNASPVTTAIAFDLATGGTIAGRAVSVASGTVLENFVAGDGDDRITGNAADN 601
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD------S 171
+L + G G ++ D + ++ +
Sbjct: 602 RLLGGRGDDVLDGGAGRNRLEGGAGDDVLFASGIDQLDGGEGYDTATWRNATSRIVIDMA 661
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK----------------------- 208
+ G A ++ I + + G + +
Sbjct: 662 NQSRNAGAAAGDSLTGIEKIVGTAYGDEIHAGGGVVRIEAGGGNDVLHGDGVSGAVLSGE 721
Query: 209 -IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM------- 260
+ + Q G D + +D S +
Sbjct: 722 AGDDRFIGGAGGQVHDGGEGFDTVSFE-TARSGVTVDFADGSHNRGDAEGDTFEGIEAVQ 780
Query: 261 ---------------TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
T+ + V GS+ D + G + +G DV DG +G+D
Sbjct: 781 GSRFDDVVRLAGTVRTVDAGAGNDVVQGSAQADGIKGGEGADWIEGGAGADVLDGGAGID 840
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
Y A ++ V + + D +S+ E + + + LE
Sbjct: 841 WLSYLASGAAVRVDMVAG---VCGGGDAQGDRISNFENVTGSRFADVLFGNNAANTLEGN 897
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
A +++ G D+ +G D
Sbjct: 898 AGDDEIRGGGGADILRGGDGNDRLFGDDGSD 928
>gi|220903557|ref|YP_002478869.1| outer membrane adhesin-like protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219867856|gb|ACL48191.1| outer membrane adhesin like proteiin [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 3091
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 56/203 (27%), Gaps = 7/203 (3%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + V + D G +N + + G N ++
Sbjct: 2869 DSFGYTVSDNRGGNDSSSIDVGITFTAGSGNADATENQLIFGNNGSDDLHGGAGNDILSG 2928
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G +G+D + G + N+ GN+ G G D ++ I
Sbjct: 2929 GAGDDHLYGGAGDDYLFGGAGNDFLDGGEGNNHLYGGDGNDVLVFHQG---DTIDGGAGT 2985
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF---- 380
I+ +++ + D + + S+ + + I +
Sbjct: 2986 DILLVSDKEGEGLNIDDLFTNTSGIEVVVTGADVNSLTNMGSLADKGITFNADNQVVLDH 3045
Query: 381 ESMKHFYEFGLSEGRDITFDSYL 403
H S G D+ +
Sbjct: 3046 AKGWHVDTTASSGGHDVWTNDAG 3068
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 62/245 (25%), Gaps = 58/245 (23%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
D G A + +D A + A + N + + T D+ G
Sbjct: 2786 DADWGTGSHAFELATDADANDTL--AYAHAGTNAAIEAGTSISGNFGTLTFSDNAGHLAY 2843
Query: 232 DLTLIGGVKNYIDLNTE-----------SWSSIGGYEKNMTIAQHTVIESVVGSSGND-- 278
+ L N + L ++ N + + I + SGN
Sbjct: 2844 EYKLDTSHDNLVRLAEAHAAGQELKDSFGYTVSDNRGGNDSSSIDVGI-TFTAGSGNADA 2902
Query: 279 ----VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
++ GN+ ++ +GND+ G +G D +
Sbjct: 2903 TENQLIFGNNGSDDLHGGAGNDILSGGAGDDHLY----------------------GGAG 2940
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D+L L+ L G DV + G
Sbjct: 2941 DDYL---------------FGGAGNDFLDGGEGNNHLYGGDGNDVLVFHQG-DTIDGGAG 2984
Query: 395 RDITF 399
DI
Sbjct: 2985 TDILL 2989
>gi|119487849|ref|ZP_01621346.1| hypothetical protein L8106_28336 [Lyngbya sp. PCC 8106]
gi|119455425|gb|EAW36563.1| hypothetical protein L8106_28336 [Lyngbya sp. PCC 8106]
Length = 724
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 44/152 (28%), Gaps = 11/152 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G ++ + + +VG+ ++ + G + N+ G+D G G D
Sbjct: 527 YIEGGQEQNILFGSRDADELVGTEISEKLYGRAGNDTLAGGLGDDQLFGGDGDDIL---R 583
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
++ + D L + L + L
Sbjct: 584 GDRNHRSPGGSVGGDDILSGGFGNDRLGG------KGGNDTLYGDEGDDQLWGDHGDDLL 637
Query: 372 IQVIGQDVFESMKHFYEF--GLSEGRDITFDS 401
+G D + F G+ +G D+ D
Sbjct: 638 WGGLGNDTVTGGQGNDTFVVGVGQGTDLIADF 669
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 13/156 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
++ GDD+L D + + G N +
Sbjct: 560 GNDTLAGGLGDDQLFGGDGDDILRGDRNHRSPGGSV-----GGDDILSGGFGNDRLGGKG 614
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE---- 322
+++ G G+D + G+ +++ + GND G G DTF I F
Sbjct: 615 GNDTLYGDEGDDQLWGDHGDDLLWGGLGNDTVTGGQGNDTFVVGVGQGTDLIADFNIGKD 674
Query: 323 --NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + ++ + + + F D+ + V+
Sbjct: 675 LIGLVNGLEVSQLSFNVNGNNTEVVFGDETLAIVDG 710
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 42/165 (25%), Gaps = 12/165 (7%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ I + GS D ++G + + +GND G G D F
Sbjct: 523 QAQFYIEGGQEQNILFGSRDADELVGTEISEKLYGRAGNDTLAGGLGDDQLF---GGDGD 579
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
I R + + D LS L + L G
Sbjct: 580 DILRGDRNHRSPGGSVGGDDILSGGF------GNDRLGGKGGNDTLYGDEGDDQLWGDHG 633
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
D+ +G D + +G DL F +
Sbjct: 634 DDLLWGGLGNDTVTGGQGNDT---FVVGVGQGTDLIADFNIGKDL 675
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/269 (14%), Positives = 77/269 (28%), Gaps = 35/269 (13%)
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN- 204
V G DN + +F + + + + +D + +++G G+
Sbjct: 448 VTGSDNFGASVTFEPGQSRFEPNLTPQQEVTLAWDTFSEAADEAGLSRLFGGIHFEDGDL 507
Query: 205 --NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+V + Q + G + + L G + TE + G N T+
Sbjct: 508 NGRTLGQDVATEVFEQAQFYIEGGQEQNI---LFGSRDADELVGTEISEKLYGRAGNDTL 564
Query: 263 AQHTVIESVVGSSGNDVVIGN----------SANNVFFESSGNDVFDGSSGLDTFFYY-- 310
A + + G G+D++ G+ +++ GND G G DT +
Sbjct: 565 AGGLGDDQLFGGDGDDILRGDRNHRSPGGSVGGDDILSGGFGNDRLGGKGGNDTLYGDEG 624
Query: 311 --------------APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + D + I VN
Sbjct: 625 DDQLWGDHGDDLLWGGLGNDTVTGGQGNDTFVVGVGQGTDL---IADFNIGKDLIGLVNG 681
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ S L + + + V G + +
Sbjct: 682 LEVSQLSFNVNGNNTEVVFGDETLAIVDG 710
Score = 39.8 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 51/177 (28%), Gaps = 19/177 (10%)
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + R I D + + + DV F ++++IL +
Sbjct: 484 FSEAADEAGLSRLFGGIHFEDGDLNGRTLGQDVATEVFEQAQFYIEGGQEQNILFGSRDA 543
Query: 369 EDLIQV---------IGQDVFESMKHFYEFGLSEGRDIT------FDSYLYLGSYDDLRN 413
++L+ G D + +G DI +G D L
Sbjct: 544 DELVGTEISEKLYGRAGNDTLAGGLGDDQLFGGDGDDILRGDRNHRSPGGSVGGDDILSG 603
Query: 414 VFGSDRGAAARH----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
FG+DR Y G + L ++ + + +V VG
Sbjct: 604 GFGNDRLGGKGGNDTLYGDEGDDQLWGDHGDDLLWGGLGNDTVTGGQGNDTFVVGVG 660
>gi|296434219|ref|NP_001171780.1| matrix metallopeptidase 19-like [Saccoglossus kowalevskii]
Length = 505
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 61/208 (29%), Gaps = 39/208 (18%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+T+ R + L + W + YK T ++ A WS V
Sbjct: 104 FTSYRSKRYALAGRKWDRTNLTYKFVNFTPDLAIV-------EQKKTIEQAFAAWSDVTP 156
Query: 68 LTFEET----------------SIHSDIKFISSNN--GYVCTPRYDSRYFMEINFDKADV 109
L+F E S + F + P++ +F + +
Sbjct: 157 LSFTEVFDGRPDILLEFSSGVHSDGKNAAFDGPGGVLAHAYYPQFGDAHFDDDEY----- 211
Query: 110 WRYGIGKGTILSHNALHEIGHALGLMH---------PGSYNGGYPVYGVDNDYENDSFLT 160
+ G L A HE GH+LGL H P ++D +
Sbjct: 212 FTVRTSDGVNLLFTAAHEFGHSLGLAHSSVSDALMYPFYQGYNPDFALTEDDIRGIQAIY 271
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDI 188
V P + +DA T + DI
Sbjct: 272 GVPDATHPDEPGVDADGMTMETHSIPDI 299
>gi|291303869|ref|YP_003515147.1| hypothetical protein Snas_6438 [Stackebrandtia nassauensis DSM
44728]
gi|290573089|gb|ADD46054.1| hypothetical protein Snas_6438 [Stackebrandtia nassauensis DSM
44728]
Length = 680
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/316 (15%), Positives = 88/316 (27%), Gaps = 24/316 (7%)
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--IVAVQ 192
H + G D ++DS +S D++ D + A+
Sbjct: 231 EHVNNDINVSTGDGKDVVTDHDSKGQRTISTGAGDDTVAVTGQDRNIFTEAGDDKVTAIG 290
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G +++ I DD L E ++
Sbjct: 291 DKNNVGTGDGNDDVKTTGGTAYAGDGDDKIRAGNHDDPLYKD-----------ADEHDTT 339
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + I T +++ G G D + G+ ++V + +D DG G D
Sbjct: 340 IYGNDGDDEIQGSTKNDTISGGKGEDEIYGHEGDDVIAGNDDHDYIDGQDGNDKI--SGG 397
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+Y + + +D+L D + +L +DL
Sbjct: 398 GDKDVLYGLDGNDAI--DGGAGRDYLEG------GDDKDVLTGGAEEDVLSGGRGDDDLR 449
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
DV + + G D +F + D V D + G
Sbjct: 450 GGDADDVTYAGEGKDTIDGGAGNDKSFVQDGDTVAKDKGDTVQKVDIADNS-FIKIDGSD 508
Query: 433 EGRNPDAFKALEYIAS 448
E ++ Y +S
Sbjct: 509 EFQDRIRADLDMYSSS 524
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/282 (13%), Positives = 71/282 (25%), Gaps = 8/282 (2%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
++DI + + V T D I + ++
Sbjct: 234 NNDINVSTGDGKDVVTDHDSKGQRTISTGAGDDTVAVTGQDRNIFTEAGDDKVTAIGDKN 293
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G+ +G V + + DA +Q
Sbjct: 294 NVGTGDGNDDVKTTGGTAYAGDGDDKIRAGNHDDPLYKDADEHDTTIYGNDGDDEIQGST 353
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G K E + I + D +D G N + G
Sbjct: 354 -KNDTISGG---KGEDEIYGHEGDDVIAGNDDHDYID----GQDGNDKISGGGDKDVLYG 405
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N I + + G DV+ G + +V G+D G D +
Sbjct: 406 LDGNDAIDGGAGRDYLEGGDDKDVLTGGAEEDVLSGGRGDDDLRGGDADDVTYAGEGKDT 465
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ V D + +D V+++ AD ++
Sbjct: 466 IDGGAGNDKSFVQDGDTVAKDKGDTVQKVDIADNSFIKIDGS 507
>gi|158339292|ref|YP_001520469.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158309533|gb|ABW31150.1| hemolysin-type calcium-binding region protein [Acaryochloris marina
MBIC11017]
Length = 348
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 68/243 (27%), Gaps = 21/243 (8%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y T+Y G+D L G N + S+ G++ N +
Sbjct: 4 YGGNDTLIGGDDDDTLYGGSGNDRL----FGLGGNDVLSGGSGNDSLFGWKGNDKLYAGP 59
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------------FYY 310
+S+ G G+D + G + N+V +G D G SG D+ +
Sbjct: 60 GNDSLDGGIGDDTLYGEAGNDVLNGGAGRDSLYGGSGNDSLYGYHDHTVESSADSDDYLS 119
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S +Y +Y +H F D + L L A +
Sbjct: 120 GGSGNDMLYGGAGKDRIYGGTDHDSLFGGIDNDSLYGGSGVDRLYGQAGNDYLSGEADTD 179
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G D H + G D + Y N + + Y
Sbjct: 180 TLFAGSGNDTLRGGDHNDQLYSDSGNDWLYGDDGGDLLYSGTGNDYLYGGDGSDVLYGEA 239
Query: 430 GVK 432
G
Sbjct: 240 GND 242
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 65/246 (26%), Gaps = 8/246 (3%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G N + + ++ G N + + + G SGND + G N+ + GN
Sbjct: 2 YGYGGNDTLIGGDDDDTLYGGSGNDRLFGLGGNDVLSGGSGNDSLFGWKGNDKLYAGPGN 61
Query: 296 DVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER-LRFA 347
D DG G DT + + +Y +Y ++H + +D + L
Sbjct: 62 DSLDGGIGDDTLYGEAGNDVLNGGAGRDSLYGGSGNDSLYGYHDHTVESSADSDDYLSGG 121
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ + ++ L I D G D
Sbjct: 122 SGNDMLYGGAGKDRIYGGTDHDSLFGGIDNDSLYGGSGVDRLYGQAGNDYLSGEADTDTL 181
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
+ N + Y G D L ++ L + G
Sbjct: 182 FAGSGNDTLRGGDHNDQLYSDSGNDWLYGDDGGDLLYSGTGNDYLYGGDGSDVLYGEAGN 241
Query: 468 DHFSNF 473
D
Sbjct: 242 DRLDGG 247
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 48/343 (13%), Positives = 91/343 (26%), Gaps = 28/343 (8%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
I D D G G + + G + G +Y +
Sbjct: 5 GGNDTLIGGDDDDTLYGGSGNDRLFGLGGNDVLSGGSGNDSLFGWKGNDKLYAGPGNDSL 64
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
D + Y + +++ G + + +YG ++ ++ +
Sbjct: 65 DGGIGDDTLYGEAGNDVLNGGAGRDS---LYGGSGNDSLYGYHDHTVESSADS-DDYLSG 120
Query: 216 SPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+Y G D + +L GG+ N + G N ++ ++
Sbjct: 121 GSGNDMLYGGAGKDRIYGGTDHDSLFGGIDNDSLYGGSGVDRLYGQAGNDYLSGEADTDT 180
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFEN 323
+ SGND + G N+ + SGND G G D + Y +Y
Sbjct: 181 LFAGSGNDTLRGGDHNDQLYSDSGNDWLYGDDGGDLLYSGTGNDYLYGGDGSDVLYGEAG 240
Query: 324 AIIVYDANEHKQDFL------------SDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ ++ D+L + + LR V L+ + L
Sbjct: 241 NDRLDGGWDYHVDYLYGGDGEDRLWGRNGNDFLRGDGGNDQLVGGYGNDDLDGGDGDDTL 300
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ G + DS N
Sbjct: 301 WGAATMGESVGSIDTLDGGNGFDLFVLGDSSGRFYDNPSTSNG 343
>gi|149202805|ref|ZP_01879777.1| alkaline phosphatase [Roseovarius sp. TM1035]
gi|149144087|gb|EDM32121.1| alkaline phosphatase [Roseovarius sp. TM1035]
Length = 1423
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 82/296 (27%), Gaps = 29/296 (9%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
N D D G + + G + G
Sbjct: 1154 GDGNTAIYNLDNLGVDSSPTGRSDGDDTLVGTDGDDVFGAGAGDDLVNGGAGNDNLGGGF 1213
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G V G + + L + + + + G
Sbjct: 1214 GNDTVNGGAGNDTIGAGLGDDIVNGGAGNDVANGGAG-------------------NDLV 1254
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G + + T+ GDD G + +D + S +GG + T
Sbjct: 1255 RGED---GNDRLGGGQGADTVEGGTGDD---FIGGGAGTDLLDGGEGNDS-LGGGLGDDT 1307
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY---APSYLYKI 318
+ + V G +DV+ G + N+ SGND+ G G+DTF + +
Sbjct: 1308 VLGGAGDDFVAGGGRDDVLDGGAGNDTLNGGSGNDLMTGGEGVDTFVFNTLTSGEADIIT 1367
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ V + D L + + A +D + ++L + ++ +
Sbjct: 1368 DFDASTETVILRSVASFDTLDITDTVAGAVVAVDGQTITFEAVLAADLTADNFLFG 1423
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 57/216 (26%), Gaps = 22/216 (10%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
S G+D ++G ++VF +G+D+ +G +G D + +
Sbjct: 1176 SDGDDTLVGTDGDDVFGAGAGDDLVNGGAGNDNL--GGGFGNDTVNGGAGNDTI--GAGL 1231
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D ++ + ++ + L G D E G
Sbjct: 1232 GDDIVNG------GAGNDVANGGAGNDLVRGEDGNDRLGGGQGADTVEGGTGDDFIGGGA 1285
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
G D+ D L G D G L+ A ++ L
Sbjct: 1286 GTDLL----DGGEGNDSLGGGLGDDTVL-----GGAGDDFVAGGGRDDVLDGGAGNDTLN 1336
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRF---VTFDSY 486
+ G D F G FD+
Sbjct: 1337 GGSGNDLMTGGEGVDTFVFNTLTSGEADIITDFDAS 1372
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/252 (14%), Positives = 54/252 (21%), Gaps = 47/252 (18%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVY--DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
Y IY +N + D L D ++
Sbjct: 1148 IAIAYEGDGNTAIYNLDNLGVDSSPTGRSDGDDTLVG------TDGDDVFGAGAGDDLVN 1201
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
A ++L G D G G DI G+ +D+ N
Sbjct: 1202 GGAGNDNLGGGFGNDTVNGGAGNDTIGAGLGDDIVNG-----GAGNDVANGGA------- 1249
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
G R D L + + D G D +
Sbjct: 1250 ------GNDLVRGEDGNDRLGGGQGADTVEGGTGDDFIGGGAGTDLLDGGEGNDSLGGGL 1303
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
LG D G GR+ L+ A ++ L +
Sbjct: 1304 GDDTVLGGAGDDFVAGG-----------------GRD----DVLDGGAGNDTLNGGSGND 1342
Query: 544 PDLVQAGKDHFS 555
G D F
Sbjct: 1343 LMTGGEGVDTFV 1354
>gi|255264748|ref|ZP_05344090.1| hemolysin-type calcium-binding protein [Thalassiobium sp. R2A62]
gi|255107083|gb|EET49757.1| hemolysin-type calcium-binding protein [Thalassiobium sp. R2A62]
Length = 447
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/251 (14%), Positives = 76/251 (30%), Gaps = 9/251 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + GDD LD GG + ++ G E N + T
Sbjct: 122 GNDVISGGFGQDMLSGNAGDDTLD----GGNNADVLTGGGGNDTLNGGEGNDDLTGRTGN 177
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++++G +G+D + + NN +G+D+ G G+ + + II
Sbjct: 178 DTIMGGAGDDKIYDRNGNNTLDGGAGDDMITGFGGV-QIVDGGVGNDTILTGQGDDIISG 236
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ + D + I+ ++L+ +G DV + +
Sbjct: 237 GDGNDSIKTKEGDDDINGGDGNDEIEGGAGDDIVNGGDGNDELLGGLGADVIDGGEGNDL 296
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+G DI D L ++ DR + + N + +
Sbjct: 297 IAGQDGADI----MNGGAGNDVLVSIDVPDRTTGIPTLTGNADADELNGGTGDDILSGDA 352
Query: 449 HEDLINAFADA 459
++ L
Sbjct: 353 NDTLSGGTGVD 363
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 73/276 (26%), Gaps = 12/276 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I GDD + D L G + I G +
Sbjct: 76 GGNDAADGGTGNDRILGGDGDDTIAGGDSDDDLDGNLGADTLSGGAGNDVISGGFGQDML 135
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + +++ G + DV+ G N+ GND G +G DT + KIY
Sbjct: 136 SGNAGDDTLDGGNNADVLTGGGGNDTLNGGEGNDDLTGRTGNDTIM--GGAGDDKIYDRN 193
Query: 323 NAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ V+ + + + I+ + + G D
Sbjct: 194 GNNTLDGGAGDDMITGFGGVQIVDGGVGNDTILTGQGDDIISGGDGNDSIKTKEGDDDIN 253
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
E G DI D+L G+D ++G +
Sbjct: 254 GGDGNDEIEGGAGDDIV----NGGDGNDELLGGLGADVIDGGEGNDLIAGQDGADIMNGG 309
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
A + D+ + P L N G +
Sbjct: 310 AGNDVLVSIDVPDRTTGIPTLTGNADADELNGGTGD 345
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/231 (11%), Positives = 49/231 (21%), Gaps = 12/231 (5%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ N T + ++G G+D + G +++ + G D G +G D
Sbjct: 67 AGNDEVFLRGGNDAADGGTGNDRILGGDGDDTIAGGDSDDDLDGNLGADTLSGGAGND-- 124
Query: 308 FYYAPSYLYKIYRFENAIIVYDA-------NEHKQDFLSDVE---RLRFADQCIDSVNVK 357
+ + D L+ E L +
Sbjct: 125 VISGGFGQDMLSGNAGDDTLDGGNNADVLTGGGGNDTLNGGEGNDDLTGRTGNDTIMGGA 184
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ L G D+ G D N
Sbjct: 185 GDDKIYDRNGNNTLDGGAGDDMITGFGGVQIVDGGVGNDTILTGQGDDIISGGDGNDSIK 244
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
+ G E + +++L+ G D
Sbjct: 245 TKEGDDDINGGDGNDEIEGGAGDDIVNGGDGNDELLGGLGADVIDGGEGND 295
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 46/319 (14%), Positives = 81/319 (25%), Gaps = 14/319 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
++ ++ D G G TI ++ ++ LG
Sbjct: 56 GGSLEDSINSLAGNDEVFLRGGNDAADGGTGNDRILGGDGDDTIAGGDSDDDLDGNLGAD 115
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + G ++ G +
Sbjct: 116 TLSGGAGNDVISGGFGQDMLSGNAGDDTLDGGNNADVLTGGGGNDTLNGGEGNDDLTGRT 175
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESW 250
G G + + D T+ GDD++ GGV N L +
Sbjct: 176 GNDTIMGG----AGDDKIYDRNGNNTLDGGAGDDMITGFGGVQIVDGGVGNDTILTGQGD 231
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
I G + N +I + + G GND + G + +++ GND G G D
Sbjct: 232 DIISGGDGNDSIKTKEGDDDINGGDGNDEIEGGAGDDIVNGGDGNDELLGGLGAD--VID 289
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
I + A I+ D L ++ L +D
Sbjct: 290 GGEGNDLIAGQDGADIM--NGGAGNDVLVSIDVPDRTTGIPTLTGNADADELNGGTG-DD 346
Query: 371 LIQVIGQDVFESMKHFYEF 389
++ D +F
Sbjct: 347 ILSGDANDTLSGGTGVDQF 365
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 40/288 (13%), Positives = 68/288 (23%), Gaps = 19/288 (6%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
N T + + D+ G T+ N + G G
Sbjct: 111 NLGADTLSGGAGNDVISGGFGQDMLSGNAGDDTLDGGNNADVLTGGGGNDTLNGGEGNDD 170
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
+ G + Y ++ +D G + V G
Sbjct: 171 LTGRTGNDTIMGGAGDDKIYDRNGNNTLDGGAGDDMITGFGGVQIVDGGVG--------- 221
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
I G+D + N + I G + +
Sbjct: 222 ----NDTILTGQGDDIISGGDGNDSIKTKEGDDDIN----GGDGNDEIEGGAGDDIVNGG 273
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI--YRFEN 323
+ ++G G DV+ G N++ G D+ +G +G D N
Sbjct: 274 DGNDELLGGLGADVIDGGEGNDLIAGQDGADIMNGGAGNDVLVSIDVPDRTTGIPTLTGN 333
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
A D LS + V + T + DL
Sbjct: 334 ADADELNGGTGDDILSGDANDTLSGGTGVDQFVVFNDGSQGTTTITDL 381
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 27/271 (9%), Positives = 54/271 (19%), Gaps = 4/271 (1%)
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+ ++ S D + +G D F N I+ +
Sbjct: 47 PSEGDDRILGGSLEDSINSLAGNDEVFLRGG-NDAADGGTGNDRILGGDGDDTIAGGDSD 105
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ L ++ + L G D + + G D
Sbjct: 106 DDLDGNLGADTLSGGAGNDVISGGFGQDMLSGNAGDDTLDGGNNADVLTGGGGNDTLNGG 165
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
N + Y +G + + + +
Sbjct: 166 EGNDDLTGRTGNDTIMGGAGDDKIYDRNGNNTLDGGAGDDMITGFGGVQIVDGGVGNDTI 225
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
L G D S + G + G+ G E
Sbjct: 226 LTGQGDDIISGGDGNDSIKTKEGDDDINGGDGNDEIEGGAGDDIVN---GGDGNDELLGG 282
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKD 552
++ ++ + AG D
Sbjct: 283 LGADVIDGGEGNDLIAGQDGADIMNGGAGND 313
>gi|104779436|ref|YP_605934.1| surface adhesion protein [Pseudomonas entomophila L48]
gi|95108423|emb|CAK13117.1| Surface adhesion protein [Pseudomonas entomophila L48]
Length = 5862
Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 18/185 (9%)
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H G V+ ND ++++ + ++A GY A+ + D V
Sbjct: 5604 LGHTEVTQPGNDT--VNGGDGNDIIFGDLVTFDGIAGTGVEAIQGYVASKLGVDAGDVDA 5661
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
N Y + + T+ G+D I I
Sbjct: 5662 R---TMHKYINEHYTEFDVSRSNDGADTLLGGNGND-------------IIFGQGGNDYI 5705
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N + T ++++G GND++ G + N++ GND+ G +G DTF + A
Sbjct: 5706 DGGKGNDILLGGTGNDTLLGGEGNDLLFGGAGNDLLIGGKGNDIMTGGTGADTFVWKAGD 5765
Query: 314 YLYKI 318
+
Sbjct: 5766 LGNDV 5770
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 48/181 (26%), Gaps = 31/181 (17%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
DV N + +GND+ G G D + + +
Sbjct: 5676 DVSRSNDGADTLLGGNGNDIIFGQGGND--YIDGGKGNDILLGGTGNDTLL--------- 5724
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS---EG 394
+ +L A + LI G D+ F G
Sbjct: 5725 -----------------GGEGNDLLFGGAGNDLLIGGKGNDIMTGGTGADTFVWKAGDLG 5767
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
D+ D G DL ++ +R + +++ G + + + L N
Sbjct: 5768 NDVIKDFKASEGDRLDLSDLLQGERASTIDNFLKLTTVNGESTLQVSTEGKLNAAGGLAN 5827
Query: 455 A 455
A
Sbjct: 5828 A 5828
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/368 (13%), Positives = 94/368 (25%), Gaps = 35/368 (9%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+N + ++ + + I G + A LG
Sbjct: 5417 GGTNYEDAFKTTANWFQNLKDGGNTGSNQTFFITDGKPTYYQANENSNPTLGTSGITLDT 5476
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK-- 199
+ N +S +Y ++ Y YG
Sbjct: 5477 FLASINYKSGMAYNGYIDSSNTNYVSIDNAGNLQVQYYRNG----------WKYGVSGEL 5526
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-----SIG 254
+ GN Y++ + T + D L I LN +
Sbjct: 5527 HAEGNGTYELSSRGGLGYDTNTTTTNNSQDSFKLLSGLSEVEAIGLNNGVNTNDLKPYDT 5586
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ I + E+++G + N+ GND+ G TF A +
Sbjct: 5587 DGKPQTNIDPSKLAEAILGH----TEVTQPGNDTVNGGDGNDIIFGDLV--TFDGIAGTG 5640
Query: 315 LYKIYRFENAIIVYDANEHKQDFL--------SDVERLRFADQCIDSVNVKQRSILEYTA 366
+ I + + + DA + + ++ + R D + I+
Sbjct: 5641 VEAIQGYVASKLGVDAGDVDARTMHKYINEHYTEFDVSRSNDGADTLLGGNGNDIIFGQG 5700
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + G D+ EG D+ F D L G+D
Sbjct: 5701 GNDYIDGGKGNDILLGGTGNDTLLGGEGNDLLFGGAG----NDLLIGGKGNDIMTGGTGA 5756
Query: 427 ITHGVKEG 434
T K G
Sbjct: 5757 DTFVWKAG 5764
>gi|300868145|ref|ZP_07112778.1| hypothetical protein OSCI_3580002 [Oscillatoria sp. PCC 6506]
gi|300333848|emb|CBN57958.1| hypothetical protein OSCI_3580002 [Oscillatoria sp. PCC 6506]
Length = 1744
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/302 (14%), Positives = 82/302 (27%), Gaps = 19/302 (6%)
Query: 45 TELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINF 104
+ + + A L + V + F F + +
Sbjct: 1406 SGFSQSTTNPADIVLASGATVSGIDF--------GNFRQTFTPSPSPTPEPTPTPTPAPA 1457
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
A L P + + +N+ S
Sbjct: 1458 PAPVPAPAPTPAPGPSPSPAPVPTPVPTDLACPADFARIAAPNLPPSPAQNNVVNGSDGD 1517
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTI 222
+ + D +G+ + I G + +Y I
Sbjct: 1518 EILVGSAGSDTIYGFNGNDAIFGQQGSDYING---NVGNDTVYGGVENDTLFGGKGFDLI 1574
Query: 223 YDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
+ G+D + + ++ G N + + + G + + +++ G S N
Sbjct: 1575 FGDRGNDTIYGNRGNDSISGDEGNDVSYGGKGNDVVLGGLGDDQLLGDQGNDTLCGGSDN 1634
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D+V G S +++ F GND+F G G DT S + + A V D D
Sbjct: 1635 DIVFGGSGDDLLFGDIGNDLFFGGLGSDTLLGGGGSDRFILASGSVADTVID-FAQGTDS 1693
Query: 338 LS 339
L
Sbjct: 1694 LV 1695
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 49/190 (25%), Gaps = 19/190 (10%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
N+VV G+ + + S+G+D G +G D F I VY E+
Sbjct: 1508 NNVVNGSDGDEILVGSAGSDTIYGFNGNDAIF--GQQGSDYINGNVGNDTVYGGVENDTL 1565
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
F L F D+ + + + G DV K G D
Sbjct: 1566 FGGKGFDLIFGDR--------GNDTIYGNRGNDSISGDEGNDVSYGGKGNDVVLGGLGDD 1617
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
D L +D + G + L+
Sbjct: 1618 QLLGDQG----NDTLCGGSDNDIV-----FGGSGDDLLFGDIGNDLFFGGLGSDTLLGGG 1668
Query: 457 ADAPDLVQVG 466
++ G
Sbjct: 1669 GSDRFILASG 1678
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 54/192 (28%), Gaps = 28/192 (14%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
NNV S G+++ GS+G DT + + I+ + + + D +
Sbjct: 1508 NNVVNGSDGDEILVGSAGSDTIY--GFNGNDAIFGQQGSDYI--NGNVGNDTV------- 1556
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ L ++ + G D + EG D+++
Sbjct: 1557 --------YGGVENDTLFGGKGFDLIFGDRGNDTIYGNRGNDSISGDEGNDVSYGGKG-- 1606
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
D + G D+ + G + + + L + +
Sbjct: 1607 --NDVVLGGLGDDQLLGDQ-----GNDTLCGGSDNDIVFGGSGDDLLFGDIGNDLFFGGL 1659
Query: 466 GKDHFSNFGCEE 477
G D G +
Sbjct: 1660 GSDTLLGGGGSD 1671
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 15/185 (8%), Positives = 40/185 (21%), Gaps = 7/185 (3%)
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + + + D + + + + + +
Sbjct: 1506 AQNNVVNGSDGDEILVGSA-GSDTIYGF------NGNDAIFGQQGSDYINGNVGNDTVYG 1558
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+ D K F G D + + D N G +
Sbjct: 1559 GVENDTLFGGKGFDLIFGDRGNDTIYGNRGNDSISGDEGNDVSYGGKGNDVVLGGLGDDQ 1618
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
L + ++ + D +G D F + S ++ +
Sbjct: 1619 LLGDQGNDTLCGGSDNDIVFGGSGDDLLFGDIGNDLFFGGLGSDTLLGGGGSDRFILASG 1678
Query: 494 DLRNV 498
+ +
Sbjct: 1679 SVADT 1683
>gi|94498404|ref|ZP_01304962.1| hypothetical protein SKA58_11950 [Sphingomonas sp. SKA58]
gi|94422159|gb|EAT07202.1| hypothetical protein SKA58_11950 [Sphingomonas sp. SKA58]
Length = 940
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 87/654 (13%), Positives = 163/654 (24%), Gaps = 100/654 (15%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
F + AD G G + + +
Sbjct: 274 FNIRGYAGNDRLFGTQGANLIDGGSGADYMVGGDGDDIYIVDQIDDVVVESQDQG--LDQ 331
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
Y + N+ EN + ++ + D D + D +YG
Sbjct: 332 ISSSVSYSLANNVENLILIGALNIDGVGNDLANDIRGNAGDNFLYGDAGD-DHLYGNAGV 390
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGD----------DLLDLTLIGGVKNYIDL----- 245
L + + + + I D+ GD D++D ++ + + I+
Sbjct: 391 DLLSGGIGADWMEGGQGNDRYIVDNMGDTAVERAGEGFDMVDTSISYTLGDNIEALRLIG 450
Query: 246 --------NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ + + ++ A T I + G G+D ++G+ ++ +G D
Sbjct: 451 AQGAVDARGNGAKNWLNAAWVDVAPAAGTQI-RLYGEGGDDNLLGSRYGDLLDGGTGVDS 509
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G +G D + + + +V + ++ + RL +++
Sbjct: 510 MTGGAGNDRYIVDNAGDVVIEQADQGFDMVDTSISYRLGDNVEALRLMGVTGAVEAHGNA 569
Query: 358 QRS-----------------ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ L +DL D+ + G D
Sbjct: 570 GNNWLNAVWVNVAPAAGTQIRLYGEGGNDDLQGSRYGDLLDGGTGADRMTGGLGNDSYVV 629
Query: 401 SYLY-------LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
YD + + G G GV G A + +
Sbjct: 630 DNAGDIVVEQAGAGYDVVTSSIGYALGDNVEAVRLIGVAAGATVVAQGNDLNNELNAVWV 689
Query: 454 NAFADAPDLVQVGKDHFSN----------FGCEEGRFVTFDSYLYLGSYDDLR---NVFG 500
+ A L G D G + R + + S DL G
Sbjct: 690 DQSAKVSLLGGGGNDRLLGSRYDDLLDGGTGADTMRGGRGNDSYVVDSVTDLVYEQAGEG 749
Query: 501 SDRGAAARHYITHGVKEG-RNPDAFKALEYIASHEDLINAFAD----------------- 542
D ++ Y EG R + +A DL N+
Sbjct: 750 YDVITSSVGYRLGANVEGLRLVGVAEGASVVAQGNDLNNSLNAVWVDKSASISLLGHGGD 809
Query: 543 ---------APDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA-AQ 592
AG D G F L + D F
Sbjct: 810 DTLQGSRFGDLLDGGAGSD--RLTGGGGADRFHFGDVLNAATNVDTILDFQKGVDVIELD 867
Query: 593 HYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ G+ G+ + F + + AD + +D L+ D G
Sbjct: 868 DAVFAGLNLGK---LDASAFVANA---SGTATSADQRIIYDTDSGQLFYDADGS 915
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/398 (12%), Positives = 93/398 (23%), Gaps = 54/398 (13%)
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
G D D D+++D F + +++G +L +
Sbjct: 237 TIGSGTDLYVDYRKYVDTLDASDGDNIVDGYFTDINAFNIRGYAGNDRLFGTQGANLIDG 296
Query: 206 IYKIEVQQKDSPFIQTIYDS----------GGDDLLD----LTLIGGVKNYIDLNTESWS 251
+ I D G D + +L V+N I + +
Sbjct: 297 GSGADYMVGGDGDDIYIVDQIDDVVVESQDQGLDQISSSVSYSLANNVENLILIGALNID 356
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+G N I + + G +G+D + GN+ ++ G D +G G D +
Sbjct: 357 GVGNDLAND-IRGNAGDNFLYGDAGDDHLYGNAGVDLLSGGIGADWMEGGQGNDRYIVDN 415
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF------------------------- 346
E +V ++E LR
Sbjct: 416 MGDTAVERAGEGFDMV--DTSISYTLGDNIEALRLIGAQGAVDARGNGAKNWLNAAWVDV 473
Query: 347 ---ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL-SEGRDITFDSY 402
A I L + + L G D + + + G + +
Sbjct: 474 APAAGTQIRLYGEGGDDNLLGSRYGDLLDGGTGVDSMTGGAGNDRYIVDNAGDVVIEQAD 533
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA------- 455
D + D A R G E L + +
Sbjct: 534 QGFDMVDTSISYRLGDNVEALRLMGVTGAVEAHGNAGNNWLNAVWVNVAPAAGTQIRLYG 593
Query: 456 -FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ D + + Y+
Sbjct: 594 EGGNDDLQGSRYGDLLDGGTGADRMTGGLGNDSYVVDN 631
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 45/375 (12%), Positives = 96/375 (25%), Gaps = 54/375 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE-IG 129
+ + + + G + D G G + NA I
Sbjct: 471 VDVAPAAGTQIRLYGEGGDDNLLGSRYGDLLDGGTGVDSMTGGAGNDRYIVDNAGDVVIE 530
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM----- 184
A + Y + +V ++ ++ ++A + A
Sbjct: 531 QADQGFDMVDTSISYRLGDNVEALRLMGVTGAVEAHGNAGNNWLNAVWVNVAPAAGTQIR 590
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+ + G+ G L + + + D+ GD +++ G
Sbjct: 591 LYGEGGNDDLQGSRYGDLLDGGTGADRMTGGLGNDSYVVDNAGDIVVEQAGAGYDVVTSS 650
Query: 245 LNTESWSS------IGGYEKNMTIAQHTVIES--------------VVGSSGNDVVIGNS 284
+ + IG +AQ + + ++G GND ++G+
Sbjct: 651 IGYALGDNVEAVRLIGVAAGATVVAQGNDLNNELNAVWVDQSAKVSLLGGGGNDRLLGSR 710
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+++ +G D G G D++ S +Y + ++VE L
Sbjct: 711 YDDLLDGGTGADTMRGGRGNDSYVVD--SVTDLVYEQAGEGYDVITSSVGYRLGANVEGL 768
Query: 345 RFAD--------------------------QCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
R I + L+ + + L G D
Sbjct: 769 RLVGVAEGASVVAQGNDLNNSLNAVWVDKSASISLLGHGGDDTLQGSRFGDLLDGGAGSD 828
Query: 379 VFESMKHFYEFGLSE 393
F +
Sbjct: 829 RLTGGGGADRFHFGD 843
>gi|197104660|ref|YP_002130037.1| Hemolysin-type calcium-binding region [Phenylobacterium zucineum
HLK1]
gi|196478080|gb|ACG77608.1| Hemolysin-type calcium-binding region [Phenylobacterium zucineum
HLK1]
Length = 1836
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/264 (15%), Positives = 71/264 (26%), Gaps = 15/264 (5%)
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----D 232
G T +V D ++ ++G + Q ++ G + L D
Sbjct: 1520 GTPNTALVIDTRSLPSGVTLQLDNVGFAAVVGAARVIGGEGSQRVWGDGANQSLFLGADD 1579
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
L GG + + G + + ++ + V G +G D V GN ++
Sbjct: 1580 DELHGGGGADTVASAGGDDRLFGDDGDDAVSGGEGADQVWGGAGEDHVHGNVGDDFVHGG 1639
Query: 293 SGNDVFDGSSGLDTFFYYAPSY------LYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
G D G G D Y + V +
Sbjct: 1640 EGRDTLHGGQGHDVVRGGQGDDIALGDLGYDTLFGDLGADVLQGGAGDDVVWGGGGLVPG 1699
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSY 402
AD + + + ++ +G DV + +G D D
Sbjct: 1700 ADAGDWIDGGEGSDFVHGNQGDDTVLGGLGADVVHGGQGADRLEGEDGADTLSGDQGDDV 1759
Query: 403 LYLGSYDDLRNVFGSDRGAAARHY 426
L G+ D VF +
Sbjct: 1760 LIGGAGADRFLVFAGGGVDRILDF 1783
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 68/232 (29%), Gaps = 14/232 (6%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM-HPGSYNGGYPVYGVDN 151
D D G G T+ S + G G G
Sbjct: 1565 WGDGANQSLFLGADDDELHGGGGADTVASAGGDDRLFGDDGDDAVSGGEGADQVWGGAGE 1624
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI-YGAPKGSLGNNIYKIE 210
D+ + + + +D++ D +A+ + Y G LG ++ +
Sbjct: 1625 DHVHGNVGDDFVHGGEGRDTLHGGQGHDVVRGGQGDDIALGDLGYDTLFGDLGADVLQGG 1684
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ ++ID S + G + + T+ +
Sbjct: 1685 AGDDVVWGGGGLVPG-----------ADAGDWIDGGEGS-DFVHGNQGDDTVLGGLGADV 1732
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
V G G D + G + G+DV G +G D F +A + +I F+
Sbjct: 1733 VHGGQGADRLEGEDGADTLSGDQGDDVLIGGAGADRFLVFAGGGVDRILDFD 1784
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 65/248 (26%), Gaps = 37/248 (14%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + T+ +GGDD L G + E + G + + +
Sbjct: 1579 DDELHGGGGADTVASAGGDDRL----FGDDGDDAVSGGEGADQVWGGAGEDHVHGNVGDD 1634
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS---------------- 313
V G G D + G ++V G+D+ G G DT F +
Sbjct: 1635 FVHGGEGRDTLHGGQGHDVVRGGQGDDIALGDLGYDTLFGDLGADVLQGGAGDDVVWGGG 1694
Query: 314 -----YLYKIYRFENAIIVYDANEHKQDFL------------SDVERLRFADQCIDSVNV 356
+ + D + +RL D
Sbjct: 1695 GLVPGADAGDWIDGGEGSDFVHGNQGDDTVLGGLGADVVHGGQGADRLEGEDGADTLSGD 1754
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ +L A + + G V + + G D L D + ++ G
Sbjct: 1755 QGDDVLIGGAGADRFLVFAGGGVDRILDFDVQEGDRLHLDAGLSYTLRQDGADTIVDLGG 1814
Query: 417 SDRGAAAR 424
R A
Sbjct: 1815 GQRVVLAD 1822
>gi|261249969|ref|NP_001159701.1| interstitial collagenase [Sus scrofa]
gi|116854|sp|P21692|MMP1_PIG RecName: Full=Interstitial collagenase; AltName: Full=Matrix
metalloproteinase-1; Short=MMP-1; Contains: RecName:
Full=18 kDa interstitial collagenase; Flags: Precursor
gi|199652431|gb|ACH91675.1| matrix metallopeptidase 1 [Sus scrofa]
Length = 469
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 57/185 (30%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W N + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 108 RWENTHLTYRIENYTPDLSREDVD-------RAIEKAFQLWSNVSPLTFTKVSEGQADIM 160
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 161 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTKNF-RDYNLYRVAA 217
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H +Y D D Y ++ + + T
Sbjct: 218 HELGHSLGLSHSTDIGALMYPNYIYTGDVQLSQDDIDGIQAIYGPSENPVQPSG---PQT 274
Query: 183 PMVSD 187
P V D
Sbjct: 275 PQVCD 279
>gi|294678707|ref|YP_003579322.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294477527|gb|ADE86915.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 447
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 51/301 (16%), Positives = 82/301 (27%), Gaps = 41/301 (13%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++ + + Y GG D LD E SI G N I
Sbjct: 82 GDDWIRGNELGNQLLGDENTYGLGGADTLD-------------GAEGDDSIYGGSGNDEI 128
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL-DTFFYYAPSYLYKIYRF 321
T + + G++ ND ++G S + +G DV DG + D Y S ++
Sbjct: 129 LGDTGNDLLFGNADNDTILGGSGRDTITGGTGADVLDGGANAGDLLSYAQSSAGVRVVLS 188
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDS-----------------VNVKQRSILEY 364
A + + D ++ + + +L
Sbjct: 189 YGATTRGTGGDAEGDRITGFFDIVGSANDDKLFDSVVTDLAQGGNANFFDGGLGNDLLSM 248
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ + G D + GRD+ D + G+DR
Sbjct: 249 GGGNDTALGGRGDDTLQGGNGNDLLDGGIGRDVIQAGNG----NDTVTGGLGTDRIN--- 301
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS-NFGCEEGRFVTF 483
G D L A + LI+ G D F + G F
Sbjct: 302 --GNSGNDRIDGGDGNDTLAGDAGDDVLISGRGSDLLTGGFGADRFVFATVSDSGAGAGF 359
Query: 484 D 484
D
Sbjct: 360 D 360
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/302 (15%), Positives = 78/302 (25%), Gaps = 19/302 (6%)
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
AD G +I + EI G + G
Sbjct: 100 NTYGLGGADTLDGAEGDDSIYGGSGNDEILGDTGNDLLFGNADNDTILGGSGRDT----- 154
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI 219
+ + D +A + + V YGA G + + +
Sbjct: 155 ITGGTGADVLDGGANAGDLLSYAQSSAGVRVVL-SYGATTRGTGGDAEG-DRITGFFDIV 212
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
+ D D + L G + N T +++ G +GND+
Sbjct: 213 GSANDDKLFDSVVTDLAQGGNANFFDGGLGNDLLSMGGGNDTALGGRGDDTLQGGNGNDL 272
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH------ 333
+ G +V +GND G G D S +I + +
Sbjct: 273 LDGGIGRDVIQAGNGNDTVTGGLGTDRI--NGNSGNDRIDGGDGNDTLAGDAGDDVLISG 330
Query: 334 -KQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D L+ +R FA I ++ + D I + G D + F
Sbjct: 331 RGSDLLTGGFGADRFVFATVSDSGAGAGFDKITDFKGAEGDRIDLSGIDANRNAPGDAAF 390
Query: 390 GL 391
Sbjct: 391 TF 392
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 73/294 (24%), Gaps = 27/294 (9%)
Query: 268 IESVVGSSGNDVVIGNSANNVF------FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
IE+ G+ G+D + GN N + G D DG+ G D+ + S +I
Sbjct: 74 IENARGAGGDDWIRGNELGNQLLGDENTYGLGGADTLDGAEGDDSIY--GGSGNDEILGD 131
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+++ ++ + +L+ A+ DL+
Sbjct: 132 TGNDLLFGNADNDT--------ILGGSGRDTITGGTGADVLDGGANAGDLLS--YAQSSA 181
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
++ +G T D + F A V +
Sbjct: 182 GVRVVLSYGA------TTRGTGGDAEGDRITGFFDIVGSANDDKLFDSVVTDLAQGGNAN 235
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
+ ++ L + L G D + + + G
Sbjct: 236 FFDGGLGNDLLSMGGGNDTALGGRGDDTLQGGNGNDLLDGGIGRDVIQAGNGNDTVTGGL 295
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G D L A + LI+ G D F
Sbjct: 296 GTDRIN---GNSGNDRIDGGDGNDTLAGDAGDDVLISGRGSDLLTGGFGADRFV 346
>gi|85705845|ref|ZP_01036941.1| hypothetical protein ROS217_08610 [Roseovarius sp. 217]
gi|85669433|gb|EAQ24298.1| hypothetical protein ROS217_08610 [Roseovarius sp. 217]
Length = 983
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/301 (14%), Positives = 79/301 (26%), Gaps = 18/301 (5%)
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT--IYDSGGDDLLDLTLIGGVK 240
+ DIV + G+ I V + + T + SGG+ +
Sbjct: 645 FGLEDIVVTLGSAILDVDTDGDGIADSTVTLEGNFTNATFNVETSGGNTQITSAGALPNI 704
Query: 241 NYIDLNTE--------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
N ++ SI G N +I + V G +GND + G N+
Sbjct: 705 NIVNGTAASEFLPGTLGDDSITGGGGNDSIPASDGDDVVNGGAGNDNIGGGFGNDTINGG 764
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS-DVERLRFADQCI 351
G+D+ G D+ + + + + S + +
Sbjct: 765 DGDDIMGAGFGDDSVV--GAAGNDVVAGGAGNDTLSGGSGDDSMSGSFGNDLINAGGGAD 822
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----FDSYLYLG 406
D + + A + + G DV DI D+
Sbjct: 823 DIGGGAGQDTINAGAGNDQVGGGEGDDVISGGDDNDFLAGGGRNDIIDGGSGDDTINGGA 882
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
D + G+D+ + G D + + D + G
Sbjct: 883 GNDQMTGGTGADQFVFSAFVAGESDVIGDFEDGIDSFFIRIINPDTGAENINNGGNGIAG 942
Query: 467 K 467
Sbjct: 943 F 943
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 1/127 (0%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+I PF T +DL + + S +I G + I+
Sbjct: 136 DIPAGGPFSPGVPFALTSVPGVTTAEVDLFSPTEGNDTL-TGFGSNDAIDGLGGDDEISG 194
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++++G +G+D + GN +++ G D DG GLD + +
Sbjct: 195 SGGADTLLGGTGDDRLFGNDGSDLLIGGPGADTVDGGLGLDILQGTSAELNGDTLVIGHG 254
Query: 325 IIVYDAN 331
+
Sbjct: 255 DEIRITG 261
>gi|255066629|ref|ZP_05318484.1| putative type 1 secretion protein [Neisseria sicca ATCC 29256]
gi|255049213|gb|EET44677.1| putative type 1 secretion protein [Neisseria sicca ATCC 29256]
Length = 922
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/370 (13%), Positives = 97/370 (26%), Gaps = 79/370 (21%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
G + + + + + N T+ +++ G G+D + G+ N++ ++G
Sbjct: 85 GAGNNSDNVLVGNSGNNRLYSGRGNDTVYGGAGHDNINGGEGDDQLFGDEGNDILDGAAG 144
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS--------------- 339
NDV G G DT+ + S + + + + + D L+
Sbjct: 145 NDVLQGGEGNDTYLFGEKSGKDTVIDRQGSNSIRFLDGLSADDLTVTAVRNAEGGQDWRI 204
Query: 340 ----------------------DVERLRFADQCIDSVNV------------KQRSILEYT 365
V+R FA+ ++ +E T
Sbjct: 205 AVKHTQSVLTISNQYQEGSNMPSVQRFVFANGTLNLNQFIKATQAQVEIRDNAGERIEGT 264
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ L +G DV + G D + + G+D ++
Sbjct: 265 EGNDALNGTVGNDVIDGKAGADMMRGGIGDDTYYVDNA--KDVVVENSSEGNDTVISSVS 322
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
Y E + A + + + G D + G +
Sbjct: 323 YTASTHVENVTLTGNANIY----------AAGNNSNNILTGNDGHNRLNSGRG-----ND 367
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
+Y +D N G D + A + LI
Sbjct: 368 TVYGMGGNDNIN-------------GGDGNDYLDGGDGNDTINGDAGDDTLIGGAGKDML 414
Query: 546 LVQAGKDHFS 555
G D +
Sbjct: 415 KGGTGNDTYI 424
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 61/384 (15%), Positives = 110/384 (28%), Gaps = 24/384 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ N +S + D G G I ++ G
Sbjct: 78 TGSDNIYGAGNNSDNVLVGNSGNNRLYSGRGNDTVYGGAGHDNINGGEGDDQLFGDEGND 137
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + G + ND++L S ++ + +D + V
Sbjct: 138 ILDGAAGNDVLQGGEG---NDTYLFGEKSGKDTVIDRQGSNSIRFLDGLSADDLTVT--- 191
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
A + + G ++I V+ S + G ++ + ++LN I
Sbjct: 192 -AVRNAEGGQDWRIAVKHTQSVLTISNQYQEGSNMPSVQRFVFANGTLNLN----QFIKA 246
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + I + E + G+ GND + G N+V +G D+ G G DT++ +
Sbjct: 247 TQAQVEIRDNAG-ERIEGTEGNDALNGTVGNDVIDGKAGADMMRGGIGDDTYYVDNAKDV 305
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
E V + + VE + I + +IL + L
Sbjct: 306 VVENSSEGNDTVI--SSVSYTASTHVENVTLTGNANIYAAGNNSNNILTGNDGHNRLNSG 363
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D M +G D YL G +D N D G
Sbjct: 364 RGNDTVYGMGGNDNINGGDGND-----YLDGGDGNDTINGDAGDDTL----IGGAGKDML 414
Query: 435 RNPDAFKALEYIASHEDLINAFAD 458
+ Y + + N +
Sbjct: 415 KGGTGNDTYIYGSDDTIIDNQGNN 438
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 72/253 (28%), Gaps = 14/253 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH---NALHEIGHAL 132
D T D+ I D+ + G G T + + G+
Sbjct: 380 GGDGNDYLDGGDGNDTINGDAGDDTLIGGAGKDMLKGGTGNDTYIYGSDDTIIDNQGNNT 439
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC---ATPMVSDIV 189
V +DN + ++ + + + +DA + +
Sbjct: 440 LKFSDDLRVSDIKVNVIDNADGSKNWEITSANGSATIQNQVDAKGHISINQFQFLGENYT 499
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A + G I + + +P I S +D L G + +
Sbjct: 500 AETLLKAVNTGKADQGI-----KNEGTPNDDVIVGSKFNDEL---SSGTDGRDVIYGMDG 551
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
I + + + + G +GND + + +G+D +G G DT+ +
Sbjct: 552 DDIIRDEGTTYWGNEWSSDDKLYGGNGNDKLYARVGADYLDGGAGDDYLEGGDGRDTYVF 611
Query: 310 YAPSYLYKIYRFE 322
I+ F
Sbjct: 612 GKGYGHDTIFDFG 624
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ G++ ++ N ++ ++ G N I + + G GND + G++
Sbjct: 342 AAGNNSNNILTGNDGHNRLNSGRG-NDTVYGMGGNDNINGGDGNDYLDGGDGNDTINGDA 400
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
++ +G D+ G +G DT+ Y I + + +++
Sbjct: 401 GDDTLIGGAGKDMLKGGTGNDTYIYG---SDDTIIDNQGNNTLKFSDD 445
Score = 50.6 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 46/367 (12%), Positives = 88/367 (23%), Gaps = 26/367 (7%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-------GYEKNMT 261
+ GDD + + + + + I + +N+T
Sbjct: 275 GNDVIDGKAGADMMRGGIGDDTYYVDN-AKDVVVENSSEGNDTVISSVSYTASTHVENVT 333
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + I G++ N+++ GN +N GND G G D +
Sbjct: 334 LTGNANIY-AAGNNSNNILTGNDGHNRLNSGRGNDTVYGMGGNDNI--NGGDGNDYLDGG 390
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + + D L Y S + +I G + +
Sbjct: 391 DGNDTI--NGDAGDDTLIG------GAGKDMLKGGTGNDTYIYG-SDDTIIDNQGNNTLK 441
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ D + ++ A H + + +
Sbjct: 442 FSDDLRVSDIKVNVIDNADGSKNWEITSANGSATIQNQVDAKGHISINQFQFLGENYTAE 501
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
L A + + S F E +Y DD+
Sbjct: 502 TLL-KAVNTGKADQGIKNEGTPNDDVIVGSKFNDELSSGTDGRDVIYGMDGDDIIR---- 556
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D G + + L + L D G+D + FG
Sbjct: 557 DEGTTYWGNEWSSDDKLYGGNGNDKLYARVGADYLDGGAGDDYLEGGDGRDTYV-FGKGY 615
Query: 562 GRSITFN 568
G F+
Sbjct: 616 GHDTIFD 622
Score = 43.6 bits (101), Expect = 0.095, Method: Composition-based stats.
Identities = 36/279 (12%), Positives = 71/279 (25%), Gaps = 23/279 (8%)
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
VF + GND YYA I N + ++VE L
Sbjct: 30 VFQGTKGND-----------VYYATHTADNIVEKANEGQDTVYSNVSYTLPNNVENLVLT 78
Query: 348 DQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY---- 402
++L + L G D EG D F
Sbjct: 79 GSDNIYGAGNNSDNVLVGNSGNNRLYSGRGNDTVYGGAGHDNINGGEGDDQLFGDEGNDI 138
Query: 403 -LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF--ADA 459
D L+ G+D V + + ++ + L+ +++ + + A A+
Sbjct: 139 LDGAAGNDVLQGGEGNDTYLFGEKSGKDTVIDRQGSNSIRFLDGLSADDLTVTAVRNAEG 198
Query: 460 PDLVQVGKDHFSN----FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
++ H + + ++ + L A +
Sbjct: 199 GQDWRIAVKHTQSVLTISNQYQEGSNMPSVQRFVFANGTLNLNQFIKATQAQVEIRDNAG 258
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ + AL ++ + G D +
Sbjct: 259 ERIEGTEGNDALNGTVGNDVIDGKAGADMMRGGIGDDTY 297
>gi|209524770|ref|ZP_03273317.1| peptidase domain protein [Arthrospira maxima CS-328]
gi|209494914|gb|EDZ95222.1| peptidase domain protein [Arthrospira maxima CS-328]
Length = 551
Score = 69.0 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 7/139 (5%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
N+ + PF + S GDD++ +G + L E + G + N T+
Sbjct: 333 NDSIQNSNNSITQPFPNQWFGSDGDDVI----MGSDSDETLLGFEGDDYLDGQQGNNTLF 388
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++VG SG D ++GN +++ F S D G G DT A ++ +
Sbjct: 389 GGQGNDTLVGGSGRDALLGNKDDDILFGGSSGDTLYGGQGHDTLV--AGEGNSLLFGDKG 446
Query: 324 AIIVYDANEHKQDFLSDVE 342
I+Y +E D L+ E
Sbjct: 447 NDILYGGSE-GIDTLNGGE 464
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 41/138 (29%), Gaps = 20/138 (14%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I E+++G G+D + G NN F GND G SG D
Sbjct: 351 WFGSDGDDVIMGSDSDETLLGFEGDDYLDGQQGNNTLFGGQGNDTLVGGSGRDALL--GN 408
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++ + +Y D L E S+L + L
Sbjct: 409 KDDDILFGGSSGDTLYGGQ--GHDTLVAGE---------------GNSLLFGDKGNDILY 451
Query: 373 QVI-GQDVFESMKHFYEF 389
G D + F
Sbjct: 452 GGSEGIDTLNGGEGNDTF 469
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 52/145 (35%), Gaps = 5/145 (3%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
++ + T++ G+D L +GG L + + G T+
Sbjct: 372 FEGDDYLDGQQGNNTLFGGQGNDTL----VGGSGRDALLGNKDDDILFGGSSGDTLYGGQ 427
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESS-GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+++V GN ++ G+ N++ + S G D +G G DTF + +E
Sbjct: 428 GHDTLVAGEGNSLLFGDKGNDILYGGSEGIDTLNGGEGNDTFVMLPGEGYTVVADWEMNQ 487
Query: 326 IVYDANEHKQDFLSDVERLRFADQC 350
V + ++ L F +
Sbjct: 488 DVMVLLGNATNYRIGDLPLGFTNAT 512
Score = 44.0 bits (102), Expect = 0.080, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 39/159 (24%), Gaps = 43/159 (27%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS G+DV++G+ ++ G+D DG G +T F
Sbjct: 353 GSDGDDVIMGSDSDETLLGFEGDDYLDGQQGNNTLF----------------------GG 390
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D L R L + L D +
Sbjct: 391 QGNDTLVG---------------GSGRDALLGNKDDDILFGGSSGDTLYGGQGHDTLVAG 435
Query: 393 EGRDITFDSYLYLGSY------DDLRNVFGSDRGAAARH 425
EG + F Y D L G+D
Sbjct: 436 EGNSLLFGDKGNDILYGGSEGIDTLNGGEGNDTFVMLPG 474
Score = 43.6 bits (101), Expect = 0.100, Method: Composition-based stats.
Identities = 16/143 (11%), Positives = 33/143 (23%), Gaps = 6/143 (4%)
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + + ++ + + +D + + L+
Sbjct: 324 VISSDESEPNDSIQNSNNSITQPFPNQWFGSDGDDVIMGSDSDETLLGFEGDDYLDGQQG 383
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAA- 422
L G D ++ DI F LY G D +
Sbjct: 384 NNTLFGGQGNDTLVGGSGRDALLGNKDDDILFGGSSGDTLYGGQGHDTLVAGEGNSLLFG 443
Query: 423 -ARHYITHGVKEGRNPDAFKALE 444
+ I +G EG +
Sbjct: 444 DKGNDILYGGSEGIDTLNGGEGN 466
>gi|260818326|ref|XP_002604334.1| hypothetical protein BRAFLDRAFT_88624 [Branchiostoma floridae]
gi|229289660|gb|EEN60345.1| hypothetical protein BRAFLDRAFT_88624 [Branchiostoma floridae]
Length = 423
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/217 (21%), Positives = 69/217 (31%), Gaps = 60/217 (27%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
+ +A + L W+ + Y+ L+ +TE A+E R A WS L
Sbjct: 36 VPDVLARYALSGTKWAKNDLTYRL-----ESLTSHLTE--TEAREAIRDAFRVWSDYTPL 88
Query: 69 TFEETSIH-SDIKFISSNN----------------------GYVCTP---RYDSRYFMEI 102
TF +DI S + P +
Sbjct: 89 TFTAVPSGRADIIIKFSTGDHQDGSPFDGRFDFHTGRGLRLAHAFQPPRDSNTYYIDGDT 148
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
+FD ++W +GT L A+HE GHALGL H PV G + +
Sbjct: 149 HFDADELWTLNSPEGTNLFQVAVHEFGHALGLSH-------TPVPG--------TIMFPA 193
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
Y D D +A+Q +YG +
Sbjct: 194 YIYKDNPCMHPD------------DKMAIQSLYGKDE 218
>gi|15146408|gb|AAK84651.1|AF205359_1 RTX toxin [Moraxella bovis]
gi|149774821|gb|ABR28451.1| cytotoxin [Moraxella bovis]
gi|149774823|gb|ABR28452.1| cytotoxin [Moraxella bovis]
gi|149774825|gb|ABR28453.1| cytotoxin [Moraxella bovis Epp63]
gi|149774827|gb|ABR28454.1| cytotoxin [Moraxella bovis]
gi|149774829|gb|ABR28455.1| cytotoxin [Moraxella bovis]
gi|149774831|gb|ABR28456.1| cytotoxin [Moraxella bovis]
gi|149774833|gb|ABR28457.1| cytotoxin [Moraxella bovis]
gi|149774835|gb|ABR28458.1| cytotoxin [Moraxella bovis]
gi|149774837|gb|ABR28459.1| cytotoxin [Moraxella bovis]
Length = 927
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 34/87 (39%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
E + + + + G GND + G+ +++ SG+DV +G +G D + +
Sbjct: 706 NDIFHSGEGDDLLDGGAGDDRLFGGKGNDRLSGDEGDDLLDGGSGDDVLNGGAGNDVYIF 765
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQD 336
+Y + A+ + D
Sbjct: 766 RKGDGNDTLYDGTGNDKLAFADANISD 792
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G + N + + G +G+D + G N+ G+D+ DG SG D
Sbjct: 697 NDVFKGSKFNDIFHSGEGDDLLDGGAGDDRLFGGKGNDRLSGDEGDDLLDGGSGDDVLNG 756
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
A + +Y + + +YD + ++L FAD I +
Sbjct: 757 GAGNDVYIFRKGDGNDTLYDG--------TGNDKLAFADANISDI 793
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 40/130 (30%), Gaps = 30/130 (23%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E V+GS NDV G+ N++F G+D+ DG +G D F
Sbjct: 688 VEEVIGSQFNDVFKGSKFNDIFHSGEGDDLLDGGAGDDRLF------------------- 728
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI--QVIGQDVFESMKH 385
D LS E +L A + I + G D
Sbjct: 729 ---GGKGNDRLSGDE------GDDLLDGGSGDDVLNGGAGNDVYIFRKGDGNDTLYDGTG 779
Query: 386 FYEFGLSEGR 395
+ ++
Sbjct: 780 NDKLAFADAN 789
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 7/136 (5%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + + + S +D+ + N I + E + G + +
Sbjct: 677 YGYQSTDNLKSV-EEVIGSQFNDVFKGSKF----NDIFHSGEGDDLLDGGAGDDRLFGGK 731
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G G+D++ G S ++V +GNDV+ G DT + + +
Sbjct: 732 GNDRLSGDEGDDLLDGGSGDDVLNGGAGNDVYIFRKGDGNDTLYDGTGNDKLAFADANIS 791
Query: 325 IIVYDANEHKQDFLSD 340
I+ + + +
Sbjct: 792 DIMIERTKEGIIVKRN 807
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 15/128 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
K S F + GDDLLD + G + N ++
Sbjct: 696 FNDVFKGSKFNDIFHSGEGDDLLD-------------GGAGDDRLFGGKGNDRLSGDEGD 742
Query: 269 ESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G SG+DV+ G + N+V F + GND +G D + + + I
Sbjct: 743 DLLDGGSGDDVLNGGAGNDVYIFRKGDGNDTLYDGTGNDKLAFADANISDIMIERTKEGI 802
Query: 327 VYDANEHK 334
+ N+H
Sbjct: 803 IVKRNDHS 810
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 47/206 (22%), Gaps = 52/206 (25%)
Query: 262 IAQHTVIESVVGSSGNDVV----IGNSANNVFFESSGNDVFDGSSGLDTFFY--YAPSYL 315
+ VI+ V + G D + + N+ F G DG G D FY
Sbjct: 562 LDFSKVIQRVAETEGTDEIGLIVNAKAGNDDIFVGQGKMNIDGGDGHDRVFYSKDGGFGN 621
Query: 316 YKIYRF----ENAIIV-------------------------------------YDANEHK 334
+ + V
Sbjct: 622 ITVDGTSATEAGSYTVNRKVARGDIYHEVVKRQETKVGKRTETIQYRDYELRKVGYGYQS 681
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D L VE + + K I + L G D K EG
Sbjct: 682 TDNLKSVEEVIGSQFNDVFKGSKFNDIFHSGEGDDLLDGGAGDDRLFGGKGNDRLSGDEG 741
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRG 420
D+ GS DD+ N +
Sbjct: 742 DDLL-----DGGSGDDVLNGGAGNDV 762
>gi|95930808|ref|ZP_01313540.1| Hemolysin-type calcium-binding region [Desulfuromonas acetoxidans DSM
684]
gi|95133156|gb|EAT14823.1| Hemolysin-type calcium-binding region [Desulfuromonas acetoxidans DSM
684]
Length = 12388
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 51/386 (13%), Positives = 110/386 (28%), Gaps = 19/386 (4%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
++ + I + + ++ + ++A +
Sbjct: 1421 AGVSTVAGAADIQITLTDGSTVSIDLSNAETLQDVLDLIEEASSLLTVVLNDDGNGLTLS 1480
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+ L N + L V + D + S G ++
Sbjct: 1481 DSAAGSGDLTVTALNGSQAANDLGILGSGNGATLDGVPFVAVAGDVRVILSDGTVVDVVL 1540
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
SD V+ A + N K+ I + SGG ++ + + G DL
Sbjct: 1541 SDADTVEDFLNAFSDAHDNLTAKLNSDGTGINLIDS---SGGSQVVSVVALNGAGAVDDL 1597
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ ++ + + VI + G +G+D + G +++ G+D DG G D
Sbjct: 1598 GLSTGTASTTGIEGTALVTGYVI--LDGGAGDDTLTGTIGDDIITGGLGSDTIDGGLGSD 1655
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSI 361
T F+ + D LS +E ID+ + +
Sbjct: 1656 TL------EESSTGDFDLGDTSLVM-DGGTDTLSSIELATLTGGEAGQTIDAADFSGDTT 1708
Query: 362 LEYTASYEDLIQVIGQDVFESM---KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
L + L+ G D F + G+ + + + + + G +
Sbjct: 1709 LISGGGADTLLGGSGNDQFRVDISNLDANDDGVKDEDEKVYVDVGGGSDNELVILGAGGN 1768
Query: 419 RGAAARHYITHGVKEGRNPDAFKALE 444
+ +I +G + +
Sbjct: 1769 ALLSNIDWIDFADTDGLSLTFSEEDS 1794
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 66/534 (12%), Positives = 130/534 (24%), Gaps = 66/534 (12%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + + + + D G G + + + + G+
Sbjct: 468 GGSANDVLIGDDSANELTGGAGNDVLLGGSGDDTLSGGAGDDQLSGGDGVDALDGGDGVD 527
Query: 136 HPGSYNGGYPVYGVDNDYENDS-------FLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
D + + S + + Q + S +
Sbjct: 528 TLTEQQDSDISLYDYADSTDVADDAVLVLGEDSELLEHIEQVDLTTGSSDNLVDIASFTL 587
Query: 189 VAVQKIYGA------PKGSLGNNIYKIEV----------QQKDSPFIQTIYDSGGDDLLD 232
AV G S + Y + TI G D LD
Sbjct: 588 GAVTVSTGDGDDTLDASTSADDLTYTFSSLTDLVLSSTTNNMTVNDVTTIVGGSGYDTLD 647
Query: 233 LTLIGGVKNYIDLNTESWSSIGGY-----EKNMTIAQHTVI------ESVVGSSGNDVVI 281
+ + + S S G + +T++ +V+ +++GS+GN +
Sbjct: 648 FSSLSDDLAMVIRADGSVSISDGSYTIEEDGTVTLSGGSVVITASEVNNLIGSNGNTTFV 707
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--ENAIIVYDANEHKQDFLS 339
+ + V DG G Y+ +Y + D +S
Sbjct: 708 FED------GGAIDGVLDGGPGGTNLLDYSGCTDLNVYVNMISPDGDGSTGSASNTDGIS 761
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE---------FG 390
+ + D + + +I+ A + + G D ++
Sbjct: 762 RIHNVLAGDGDDEITGSDEANIIITGAGDDTIYGGGGADTIDAGAGDDILGGGDGVDILI 821
Query: 391 LSEGRDIT---FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
EG D+ D+ + + L V G I + G +
Sbjct: 822 GGEGTDLLDEQLDATSMVLTDTSLTTVVGGVTTTDTLTDIEQAMLTGGDSVNTLDASAFT 881
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS------ 501
+ L+ D + + G L D V
Sbjct: 882 LGSVALYGEGGDDTLIGSVSDDYLSGGEGSDAISGNGGIDTLIEARDADMVLTDSALTIG 941
Query: 502 ---DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D + H G G + + A + A + L D +G D
Sbjct: 942 AEVDSLSGITHAELTG---GDSANVIDASTFTAGNVTLDGGAGDDILYGGSGDD 992
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 63/453 (13%), Positives = 121/453 (26%), Gaps = 53/453 (11%)
Query: 91 TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA------LGLMHPGSYNGGY 144
T D+ + A G G T+ + + ++ + L L +
Sbjct: 573 TGSSDNLVDIASFTLGAVTVSTGDGDDTLDASTSADDLTYTFSSLTDLVLSSTTNNMTVN 632
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK----- 199
V + D+ S +S + D S + + G
Sbjct: 633 DVTTIVGGSGYDTLDFSSLSDDLAMVIRADGSVSISDGSYTIEEDGTVTLSGGSVVITAS 692
Query: 200 ------GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-------DLN 246
GS GN + E + GG +LLD + + Y+ D +
Sbjct: 693 EVNNLIGSNGNTTFVFEDGGAIDGVLD--GGPGGTNLLDYSGCTDLNVYVNMISPDGDGS 750
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND---------- 296
T S S+ G + + + + GS +++I + ++ + G D
Sbjct: 751 TGSASNTDGISRIHNVLAGDGDDEITGSDEANIIITGAGDDTIYGGGGADTIDAGAGDDI 810
Query: 297 --------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ G G D + + ++ D L+D+E+
Sbjct: 811 LGGGDGVDILIGGEGTD--LLDEQLDATSMVLTDTSLTTVVGGVTTTDTLTDIEQAMLTG 868
Query: 349 QC-----IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
S L + LI + D + + G D ++
Sbjct: 869 GDSVNTLDASAFTLGSVALYGEGGDDTLIGSVSDDYLSGGEGSDAISGNGGIDTLIEARD 928
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
D G++ + + G + + A + A + L D
Sbjct: 929 ADMVLTDSALTIGAE-VDSLSGITHAELTGGDSANVIDASTFTAGNVTLDGGAGDDILYG 987
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
G D G + DD+R
Sbjct: 988 GSG-DDLLTGGAGIDELYGNAGTDTVAESDDVR 1019
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 42/139 (30%), Gaps = 7/139 (5%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFEN 323
+ G G+D +IG+ +++ G+D G+ G+DT S L ++
Sbjct: 887 LYGEGGDDTLIGSVSDDYLSGGEGSDAISGNGGIDTLIEARDADMVLTDSALTIGAEVDS 946
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ A D + ++ F + IL + + L G D
Sbjct: 947 LSGITHAELTGGDSANVIDASTFTAGNVTLDGGAGDDILYGGSGDDLLTGGAGIDELYGN 1006
Query: 384 KHFYEFGLSEGRDITFDSY 402
S+
Sbjct: 1007 AGTDTVAESDDVRFILSDT 1025
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 77/273 (28%), Gaps = 15/273 (5%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWR-YGIGKGTILSHNALHEIGHALGLMHP 137
I+ S N+ + D D + + + ++ H G
Sbjct: 11859 IELGSGNDTFNTQSTLTGTSTTVYANDGNDTFNVSSDAPDNLGDLDGINGDLHLDGGDGD 11918
Query: 138 GSYNGGYPVYGVDNDYEND----SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ N D S L + ++ G+ D
Sbjct: 11919 NTLNISDRGNDSGRTIVIDENGISGLGDSSDGAITFETSGTFGGGFNLALGDGDDDVTVI 11978
Query: 194 IYGAPKGSL-----GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ G++ + Q ++ GDD +D I + E
Sbjct: 11979 GAQTDSVTTLRVGGGDDQVIFDNQSPQEDGTVVVFGEAGDDTVDGANWQNDLILIGDDGE 12038
Query: 249 SWSSIGGYEKNM-----TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
N+ I+ +++VG SG+DVVIG ++ + +SGND G SG
Sbjct: 12039 VVYDGEQMPDNLRRVTSFISDGDGDDTLVGGSGHDVVIGGMGDDALYGNSGNDSLLGDSG 12098
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
T+ A Y + F D
Sbjct: 12099 QVTYDNNASLYQVEATNFFVGGEDLLNGGSGND 12131
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 60/191 (31%), Gaps = 11/191 (5%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + + G + + + ++G SG+D + G + ++ G D DG G+
Sbjct: 467 IGGSANDVLIGDDSANELTGGAGNDVLLGGSGDDTLSGGAGDDQLSGGDGVDALDGGDGV 526
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDAN----EHKQDFLSDVERLRFADQCIDSVNVKQRS 360
DT +Y + ++ V D + L +E++ D
Sbjct: 527 DTLT-EQQDSDISLYDYADSTDVADDAVLVLGEDSELLEHIEQVDLTTGSSD----NLVD 581
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFY--EFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
I +T + G D ++ + S D+ S + +D+ + G
Sbjct: 582 IASFTLGAVTVSTGDGDDTLDASTSADDLTYTFSSLTDLVLSSTTNNMTVNDVTTIVGGS 641
Query: 419 RGAAARHYITH 429
Sbjct: 642 GYDTLDFSSLS 652
Score = 47.1 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 51/339 (15%), Positives = 89/339 (26%), Gaps = 24/339 (7%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+G DS + D G+G LS+ L E+ LG +
Sbjct: 11813 GGDGQDSLILDDSGDSTDNTGLLTDTTISGLGLRDGLSYAGLEELAIELGSGNDTFNTQS 11872
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
Y ND T +S P + + I + G +
Sbjct: 11873 TLTGTSTTVYANDGNDTFNVSSDAPDNLGD-----------LDGINGDLHLDGGDGDNTL 11921
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
N + + + GD + ++ G +
Sbjct: 11922 NISDRGNDSGRTIVIDENGISGLGDSSDGAITFETSGTF----GGGFNLALGDGDDDVTV 11977
Query: 264 QHTVIESV----VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+SV VG + V+ N + G V G +G DT A I
Sbjct: 11978 IGAQTDSVTTLRVGGGDDQVIFDNQSPQE----DGTVVVFGEAGDDT-VDGANWQNDLIL 12032
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
++ +VYD + + + D V ++ + L G D
Sbjct: 12033 IGDDGEVVYDGEQMPDNLRRVTSFISDGDGDDTLVGGSGHDVVIGGMGDDALYGNSGNDS 12092
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ + + ++G D L G+D
Sbjct: 12093 LLGDSGQVTYDNNASLYQVEATNFFVGGEDLLNGGSGND 12131
Score = 45.5 bits (106), Expect = 0.025, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 57/162 (35%), Gaps = 7/162 (4%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
T+ S G +L + +++ + ++ + ++++G++G+
Sbjct: 1241 GTLTVAISQGGQAANLLDSIEQAELVGGISDNIMDASAFSGSVVLYGADGDDTLIGAAGD 1300
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + GN+ + G+D+ DG D + + + + + D
Sbjct: 1301 DELYGNAGFDTLTGGLGDDLIDGGEDEDLLMEQRDASTITLTNTSLTM------DSESDT 1354
Query: 338 LSDVERLRFADQ-CIDSVNVKQRSILEYTASYEDLIQVIGQD 378
L+ +E + ++++ + L S L G D
Sbjct: 1355 LTGIEVAQLTGGASSNAIDASAFTGLSSDTSRIYLNNGEGVD 1396
Score = 45.2 bits (105), Expect = 0.032, Method: Composition-based stats.
Identities = 58/490 (11%), Positives = 119/490 (24%), Gaps = 32/490 (6%)
Query: 69 TFEETSIH-SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
E + + + + + T +S + DV GT+
Sbjct: 11455 DVVEVTTNVGTLDLQTQDGADSVTVGSNSGDMTLDSGLDDDVVEVTANLGTMDLQTQDGA 11514
Query: 128 IGHALGLMHPG-SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
+G + + G V+ + ++ + +
Sbjct: 11515 DTVTVGSNSGDMTLDSGLGDDVVEVTANLGTMDLQTQDGADTVTVGSNSGDMTLDSGLGD 11574
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D+V V G + V + T+ GDD +DL G +
Sbjct: 11575 DVVEVTANLGTMDLQTQDGADT--VTVGSNSGDMTLDSGSGDDQVDLFTNTGTLDVQTQQ 11632
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + + I + +++ S + + G+D+ D
Sbjct: 11633 GSDTVHLYSTDGEVVIDTGSENDTLTVGSLTATLDEINGPVTVIGGDGSDILVFDDSGDN 11692
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ F+ + DV + ++ + T+
Sbjct: 11693 SDNSGTLSEDTLSGFD------MGSPLSYTTFEDVTLALGSGNDDLTIASTIPGVTTVTS 11746
Query: 367 SYED----LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD-LRNVFGSDRGA 421
D + G + R + L G+ DD
Sbjct: 11747 GDGDDQVEVETSQGDLTVFGDAGADTLIV---RTTDGNVVLDGGAGDDSFLLGSEDGLLD 11803
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ IT +G++ + L + +G ++ E +
Sbjct: 11804 GLQGPITLVGGDGQDSLILDDSGDSTDNTGL----LTDTTISGLGLRDGLSYAGLEELAI 11859
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK----EGRNPDAFKALEYIASHEDLI 537
LGS +D N + G + Y G PD L+ I L
Sbjct: 11860 E------LGSGNDTFNTQSTLTGTSTTVYANDGNDTFNVSSDAPDNLGDLDGINGDLHLD 11913
Query: 538 NAFADAPDLV 547
D +
Sbjct: 11914 GGDGDNTLNI 11923
>gi|254471153|ref|ZP_05084555.1| 5'-nucleotidase [Pseudovibrio sp. JE062]
gi|211959299|gb|EEA94497.1| 5'-nucleotidase [Pseudovibrio sp. JE062]
Length = 1553
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 85/294 (28%), Gaps = 30/294 (10%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA---------N 286
G + + T+ + G+ N TI+ + + + GND++ +
Sbjct: 17 FGTWWDDVINGTDGIDWVWGFNGNDTISTYAGNDWIRAGKGNDLIFAGDGNDRISAAGGD 76
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII----VYDANEHKQDFLSDVE 342
+V +GND +G G DT Y Y + V + ++D L +VE
Sbjct: 77 DVIHGGAGNDSINGGRGFDTAVYEGSIDDYSFQQRGRWWNPKTKVIANDGSEKDTLMNVE 136
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+ F Y + I+ V + + +
Sbjct: 137 AVYFQ----------ADDYTYYLDGRNNEIRAGEDAVASGDEGLVIDAA----TLLENDK 182
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD- 461
Y G + + A + +G + F +L + ED +
Sbjct: 183 DYDGD-TLSITGVSATSTSGATVSLENGQVSYIPGNVFDSLREGETAEDTFTYTVTDGNG 241
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY-DDLRNVFGSDRGAAARHYITHG 514
+ + G + ++ S + + ++ +D Y G
Sbjct: 242 STKDVTVTVTVTGSNQAPVLSVASEVSIAENTTEVATASATDVDNTDLTYSVSG 295
>gi|149774839|gb|ABR28460.1| cytotoxin [Moraxella bovis]
gi|149774841|gb|ABR28461.1| cytotoxin [Moraxella bovis]
Length = 927
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 34/87 (39%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
E + + + + G GND + G+ +++ SG+DV +G +G D + +
Sbjct: 706 NDIFHSGEGDDLLDGGAGDDRLFGGKGNDRLSGDEGDDLLDGGSGDDVLNGGAGNDVYIF 765
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQD 336
+Y + A+ + D
Sbjct: 766 RKGDGNDTLYDGTGNDKLAFADANISD 792
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G + N + + G +G+D + G N+ G+D+ DG SG D
Sbjct: 697 NDVFKGSKFNDIFHSGEGDDLLDGGAGDDRLFGGKGNDRLSGDEGDDLLDGGSGDDVLNG 756
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
A + +Y + + +YD + ++L FAD I +
Sbjct: 757 GAGNDVYIFRKGDGNDTLYDG--------TGNDKLAFADANISDI 793
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 7/136 (5%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + + + S +D+ + N I + E + G + +
Sbjct: 677 YGYQSTDNLKSV-EEVIGSQFNDVFKGSKF----NDIFHSGEGDDLLDGGAGDDRLFGGK 731
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G G+D++ G S ++V +GNDV+ G DT + + +
Sbjct: 732 GNDRLSGDEGDDLLDGGSGDDVLNGGAGNDVYIFRKGDGNDTLYDGTGNDKLAFADANIS 791
Query: 325 IIVYDANEHKQDFLSD 340
I+ + + +
Sbjct: 792 DIMIERTKEGIIVKRN 807
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 15/128 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
K S F + GDDLLD + G + N ++
Sbjct: 696 FNDVFKGSKFNDIFHSGEGDDLLD-------------GGAGDDRLFGGKGNDRLSGDEGD 742
Query: 269 ESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G SG+DV+ G + N+V F + GND +G D + + + I
Sbjct: 743 DLLDGGSGDDVLNGGAGNDVYIFRKGDGNDTLYDGTGNDKLAFADANISDIMIERTKEGI 802
Query: 327 VYDANEHK 334
+ N+H
Sbjct: 803 IVKRNDHS 810
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 55/220 (25%), Gaps = 31/220 (14%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
+ D LD + + + E + N I ++ G G+D V
Sbjct: 553 VTDGEASSKLDFSKVIQRVAETEGTDEIGLIVNAKAGNDDIFVGQGKMNIDGGDGHDRVF 612
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY---------------------KIYR 320
+ GN DG+S + Y + I
Sbjct: 613 YSK-----DGGFGNITVDGTSATEAGSYTVNRKVARGDIYHEVVKRQETKVGKRTETIEY 667
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + D L VE + + K I + L G D
Sbjct: 668 RDYELRKVGYGYQSTDNLKSVEEVIGSQFNDVFKGSKFNDIFHSGEGDDLLDGGAGDDRL 727
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
K EG D+ GS DD+ N +
Sbjct: 728 FGGKGNDRLSGDEGDDLL-----DGGSGDDVLNGGAGNDV 762
>gi|153829724|ref|ZP_01982391.1| RTX toxin RtxA [Vibrio cholerae 623-39]
gi|148874803|gb|EDL72938.1| RTX toxin RtxA [Vibrio cholerae 623-39]
Length = 4558
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 57/220 (25%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4181 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI 4240
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4241 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4299
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ G D+
Sbjct: 4300 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVVK 4359
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 4360 -----LMGYHAVLNGGDGDDHLIAAAISKFSQFNGGEGRD 4394
Score = 39.0 bits (89), Expect = 2.6, Method: Composition-based stats.
Identities = 36/319 (11%), Positives = 74/319 (23%), Gaps = 70/319 (21%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
DI N + + + + +G + I
Sbjct: 4191 GDGDINISLGNYNF----NWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI------ 4240
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G N + G +N +M D+ + A D +
Sbjct: 4241 FTGGEGNDMGVLMGREN----------MMFGGDGNDTAVVAGRINHVFLGAGDDQS---- 4286
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
++ + + SG + +D +S
Sbjct: 4287 ----------FVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQD-----------YSVTI 4325
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLD 305
G + + ++ G+ N +GNDV +G G D
Sbjct: 4326 GNNNQVELGAGNDFANIFGNY-----------NRINAGAGNDVVKLMGYHAVLNGGDGDD 4374
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRS 360
A S + E ++ +DV+ + ID + +
Sbjct: 4375 HLIAAAISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNI 4434
Query: 361 ILEYTASYEDLIQVIGQDV 379
+ + + G D+
Sbjct: 4435 VFNGIDWQKLWFERSGYDL 4453
Score = 39.0 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 37/164 (22%), Gaps = 11/164 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + N + +G G + ++ S SG DT
Sbjct: 21 SVEYFFTGNYSADDGNNNIVAIGFGG--QIHAYGGDDHVTVGSIGATVYTGSGNDTVV-- 76
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTA 366
S K+ + V A + S + FA ID + A
Sbjct: 77 GGSAYLKVEDSTGHLTVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAA 136
Query: 367 SYE--DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+Y + G F + E
Sbjct: 137 AYNGITRKGLSGNVTFAGAGGYNAL-WHETNQGNLSFTGAGAGN 179
Score = 38.2 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 57/200 (28%), Gaps = 28/200 (14%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ Y A ++IVA+ G Y + T+Y G+D +
Sbjct: 26 FTGNYSADDGNNNIVAIGF--GGQIH-----AYGGDDHVTVGSIGATVYTGSGNDTVVGG 78
Query: 235 L------IGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSA 285
+ + N++ A I+ + G+ G+ G +A
Sbjct: 79 SAYLKVEDSTGHLTVKGAAGYADINKSGDGNVSFAGAAGGVSIDHL-GNHGDVSYGGAAA 137
Query: 286 NNVFF--ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N SGN F G+ G + ++ + + A + + R
Sbjct: 138 YNGITRKGLSGNVTFAGAGGYNALWHET---------NQGNLSFTGAGAGNKLDRTWFNR 188
Query: 344 LRFADQCIDSVNVKQRSILE 363
+ + + + +
Sbjct: 189 YQGSHGDVTFDGAGAANSIS 208
>gi|17228898|ref|NP_485446.1| hypothetical protein alr1403 [Nostoc sp. PCC 7120]
gi|17130750|dbj|BAB73360.1| alr1403 [Nostoc sp. PCC 7120]
Length = 556
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/353 (12%), Positives = 86/353 (24%), Gaps = 30/353 (8%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG--KGTILSHNALHEIGHALG 133
S T + + + D D G G + +
Sbjct: 122 GGAGNDELSGGAGNDTLDGGTGFDILKGGDGDDTLIDTEGNIDGGAGTDTLRADYSRYDN 181
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G +++ + + + D G ++ +
Sbjct: 182 GAGVHVGYLGQAQIFSRLTGTGILGYSNIEKFEITGTNYADILQGGSGNDILKGGAGNDE 241
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQ-----------TIYDSGGDDLLDLTLIGGVKNY 242
+ G + + + D + + D + D T
Sbjct: 242 LSGKGGNDTLDGGFGYDTVVYDGNYADYGISFLSNGDLQVIDKNLTNGNDGTDTIRGVEV 301
Query: 243 IDLNTES-WSSIGGYEKNMTIA---------QHTVIESVVGSSGNDVVIGNSANNVFFES 292
I+ + + G N + + + G +GND + G++ N+
Sbjct: 302 INFRQGGSYGVVTGTTGNDVLTASNMWSFVFGGGGNDIITGGTGNDTLDGSTGNDTLIGG 361
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY-----DANEHKQDFLSDVERLRFA 347
+GND G +G+DT Y Y I N + D L VE + F
Sbjct: 362 AGNDTLIGGAGVDTAVYAGNYADYGISFLSNGDLQVIDKNLTNGNDGTDILKGVEVINFT 421
Query: 348 DQC--IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++L + + + G D G D
Sbjct: 422 QGGSYGVVTGTTGNNVLTASNMWSFVFGGNGNDTITGGTGNDTLVGGLGADTL 474
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 47/159 (29%), Gaps = 13/159 (8%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-------FDGSSGLDTFFYY 310
+ + + +++ G G D + G + ++ G+D DG +G DT
Sbjct: 3 GDDILTGGSQNDTIEGGEGKDTINGGAGFDILKGGDGDDTLIDTEGNIDGGAGTDTLRAD 62
Query: 311 APSYLYKIYRFEN----AIIVYDANEHKQDFLSDVERLRFADQ--CIDSVNVKQRSILEY 364
Y A I S++E+ +L+
Sbjct: 63 YSKYDNGAGVHVGYLGQAQIFSRQTGTGILGYSNIEKFEITGTKYADILQGGVGNDVLKG 122
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
A ++L G D + F +G D D+
Sbjct: 123 GAGNDELSGGAGNDTLDGGTGFDILKGGDGDDTLIDTEG 161
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/314 (16%), Positives = 90/314 (28%), Gaps = 43/314 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + + + G +GND + G + N+ +G D+ G G DT
Sbjct: 102 ITGTKYADILQGGVGNDVLKGGAGNDELSGGAGNDTLDGGTGFDILKGGDGDDTLIDTEG 161
Query: 313 S----YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ R + + A H R I + ++ + T
Sbjct: 162 NIDGGAGTDTLRADYSRYDNGAGVHVGYLGQAQIFSRLTGTGILGYSNIEKFEITGTNYA 221
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L G D+ + E G D L FG D +Y
Sbjct: 222 DILQGGSGNDILKGGAGNDELSGKGGND-------------TLDGGFGYDTVVYDGNYAD 268
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+G+ N D + + + D G + R V ++
Sbjct: 269 YGISFLSNGDLQVIDKNLTNGND----------------------GTDTIRGVEVINFRQ 306
Query: 489 LGSYDDLRNVFGSDRGAAAR----HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
GSY + G+D A+ + G L+ ++ LI +
Sbjct: 307 GGSYGVVTGTTGNDVLTASNMWSFVFGGGGNDIITGGTGNDTLDGSTGNDTLIGGAGNDT 366
Query: 545 DLVQAGKDHFSNFG 558
+ AG D G
Sbjct: 367 LIGGAGVDTAVYAG 380
>gi|125838084|ref|XP_001345507.1| PREDICTED: collagenase 3 [Danio rerio]
Length = 461
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 58/205 (28%), Gaps = 57/205 (27%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTH--RLSFDITELNPNAQEVARWALGEWSKVVDLTFEE 72
+H RD W + ++ T + D R AL WSKV L F +
Sbjct: 96 NHFPRDLKWKTTNVTFRILNYTPDLKKKVVD---------RAVRKALNVWSKVTPLRFTK 146
Query: 73 T-SIHSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGK 116
T +DI + P + +FD+ + W
Sbjct: 147 TFDGTADIMISFGTKEHGDFNPFDGPEGLLAHAYPP--GIGIGGDTHFDEDETWTEDYHA 204
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
L A HE GHALG+ H S + V SY D
Sbjct: 205 FN-LFLVAAHEFGHALGMAHSSDPG---------------SLMYPVYSYAKGFPLSED-- 246
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGS 201
DI +Q +YG
Sbjct: 247 ----------DIEGIQSLYGENPDH 261
>gi|158338174|ref|YP_001519351.1| hemolysin-type calcium-binding protein [Acaryochloris marina
MBIC11017]
gi|158308415|gb|ABW30032.1| hemolysin-type calcium-binding region protein, putative
[Acaryochloris marina MBIC11017]
Length = 1227
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/255 (15%), Positives = 77/255 (30%), Gaps = 5/255 (1%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
+ D G G T+ LG+ + G
Sbjct: 931 AAGNNRLEGNDGNDELAGGAGNDTLLGGAGNDTLRGGGGNDITDGGLGIDTADFSDIGAA 990
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQD--SMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
V +++ + + + S+ + A + + +A + GA +L
Sbjct: 991 VTARLDEHGRGIAIYQGPNGRVVDRLISIENLIGSANADSLSGNELANELAGGAGNDTLL 1050
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + G D D + IG ++ +
Sbjct: 1051 GGA--GDDILRGGGGNDVTDGGLGIDTADFSDIGAAVTASIDEHGRGTATYQGPNGLVTD 1108
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-APSYLYKIYRFE 322
Q IE++ GS NDV++GN+ NV + G+D G G DTF + + F+
Sbjct: 1109 QLISIENLTGSENNDVLLGNAEVNVLVGNGGDDTLTGGLGADTFVFGPEALGADVVTDFQ 1168
Query: 323 NAIIVYDANEHKQDF 337
+ + + D +
Sbjct: 1169 DGLDLLDVSAFSLGT 1183
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 67/202 (33%), Gaps = 30/202 (14%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-------------------- 248
T+ GG+D+ D L ++ D+
Sbjct: 951 GNDTLLGGAGNDTLRGGGGNDITDGGLGIDTADFSDIGAAVTARLDEHGRGIAIYQGPNG 1010
Query: 249 -------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
S ++ G +++ + + + G +GND ++G + +++ GNDV DG
Sbjct: 1011 RVVDRLISIENLIGSANADSLSGNELANELAGGAGNDTLLGGAGDDILRGGGGNDVTDGG 1070
Query: 302 SGLDTFFYYA-PSYLYKIYRFENAIIVYDANEHK--QDFLSDVERLRFADQCIDSVNVKQ 358
G+DT + + + + D L +E L ++ + +
Sbjct: 1071 LGIDTADFSDIGAAVTASIDEHGRGTATYQGPNGLVTDQLISIENLTGSENNDVLLGNAE 1130
Query: 359 RSILEYTASYEDLIQVIGQDVF 380
++L + L +G D F
Sbjct: 1131 VNVLVGNGGDDTLTGGLGADTF 1152
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 77/276 (27%), Gaps = 19/276 (6%)
Query: 223 YDSGGDDLLDLTLIGGVKNYID--LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
D+G ++ + I+ + + I N + + + + G +GND +
Sbjct: 896 VDTGDGNVFTEIIETDTLASIENVVGSNDNDVILAAAGNNRLEGNDGNDELAGGAGNDTL 955
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYY--APSYLYKIYRFENAIIVYDANEHKQ-DF 337
+G + N+ GND+ DG G+DT + + ++ I +Y + D
Sbjct: 956 LGGAGNDTLRGGGGNDITDGGLGIDTADFSDIGAAVTARLDEHGRGIAIYQGPNGRVVDR 1015
Query: 338 LSDVERLRFADQCI---------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
L +E L + + L A + L G DV +
Sbjct: 1016 LISIENLIGSANADSLSGNELANELAGGAGNDTLLGGAGDDILRGGGGNDVTDGGLGIDT 1075
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
S+ S G E L A
Sbjct: 1076 ADFSDIGAAVTASIDEHGRGTATYQGPNGLVTDQLISIENLTGSE-----NNDVLLGNAE 1130
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
L+ D +G D F G V D
Sbjct: 1131 VNVLVGNGGDDTLTGGLGADTFVFGPEALGADVVTD 1166
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 37/306 (12%), Positives = 75/306 (24%), Gaps = 19/306 (6%)
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + D L+ +E + ++ + + LE ++L G D
Sbjct: 895 GVDTGDGNVFTEIIETDTLASIENVVGSNDNDVILAAAGNNRLEGNDGNDELAGGAGNDT 954
Query: 380 FESMKHFYEFGLSEGRDIT-----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHG---- 430
G DIT D+ + + A + +G
Sbjct: 955 LLGGAGNDTLRGGGGNDITDGGLGIDTADFSDIGAAVTARLDEHGRGIAIYQGPNGRVVD 1014
Query: 431 ----VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
++ +L +L + L G D G +
Sbjct: 1015 RLISIENLIGSANADSLSGNELANELAGGAGNDTLLGGAGDDILRGGGGNDVTDGGLGID 1074
Query: 487 LYLGSY-DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
S + G Y + + L +++ L+
Sbjct: 1075 TADFSDIGAAVTASIDEHGRGTATYQGPNGLVTDQLISIENLTGSENNDVLLGNAEVNVL 1134
Query: 546 LVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
+ G D + G + F P+ D+ F + G E +++
Sbjct: 1135 VGNGGDD--TLTGGLGADTFVFGPE---ALGADVVTDFQDGLDLLDVSAFSLGTTELQSV 1189
Query: 606 GISGMQ 611
S Q
Sbjct: 1190 ISSAQQ 1195
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 35/301 (11%), Positives = 69/301 (22%), Gaps = 8/301 (2%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++ + + V GND G +G DT + + +N
Sbjct: 671 DVILSGFDDTFTSSSRRGAVITGGLGNDSISGGTGRDTVRFDDIDVPVNVTLDDNGNGTA 730
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
++E + L +
Sbjct: 731 TRKNGFALHFENIEVDSLNTAAVADDAAFLSEALAGNLYFNIHTNDFNGGEIRGQLDNIV 790
Query: 389 FGLSEG--RDITFDSYLYLGSYDDLRNVFGSDR------GAAARHYITHGVKEGRNPDAF 440
++EG R + + L + + A IT+ + A
Sbjct: 791 SDVTEGGVRTVVLSAVLDAAQEPGPTSDSEATGEGLVTLTVAPDGSITYDLSLQTTGLAT 850
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
L +A + A A V D + G + V +
Sbjct: 851 FDLLPVAGFSAIHLHNAPAGVNGPVILDVVQDAGGDITGLVQAPGVDTGDGNVFTEIIET 910
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
+ ++ LE +++L + L AG D G
Sbjct: 911 DTLASIENVVGSNDNDVILAAAGNNRLEGNDGNDELAGGAGNDTLLGGAGNDTLRGGGGN 970
Query: 561 E 561
+
Sbjct: 971 D 971
>gi|238785711|ref|ZP_04629686.1| serine protease [Yersinia bercovieri ATCC 43970]
gi|238713396|gb|EEQ05433.1| serine protease [Yersinia bercovieri ATCC 43970]
Length = 1815
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 49/156 (31%), Gaps = 8/156 (5%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+V G+ G+D +I + + G + + G+SG D F A I V
Sbjct: 572 NVYGARGDDDLIASPEGSWLVGRGGRNTYTGNSGNDVFVISASDDTRYIQGKGGTDTVLI 631
Query: 330 ANEHKQDFL---SDVERLRFADQCIDSVNVKQRSIL-EYTASYEDLIQVIGQDVFESMKH 385
+ S + + D ++ S+ + L+ G DV +
Sbjct: 632 TGDQGVGLNMARSGITIAQGGDGDDIIISGGNNSVFIQGGNGNSTLVGGGGNDVLSGGRG 691
Query: 386 FYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGS 417
+ G+ + + +Y + + G
Sbjct: 692 KNKIIGGSGKAVIYAGPQGDTIYASEQGSIIHAGGG 727
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 58/190 (30%), Gaps = 35/190 (18%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G+ GN+++ S + I GG D + +T GV +++ + G
Sbjct: 599 TYTGNSGNDVF----VISASDDTRYIQGKGGTDTVLITGDQGVG--LNMARSGITIAQGG 652
Query: 257 EKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + I + G +GN ++G N+V G + G SG YA
Sbjct: 653 DGDDIIISGGNNSVFIQGGNGNSTLVGGGGNDVLSGGRGKNKIIGGSG--KAVIYAGPQG 710
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
IY E I+ + S + ++
Sbjct: 711 DTIYASEQGSII--------------------------HAGGGADRIYGNKSNDVIVAGQ 744
Query: 376 GQDVFESMKH 385
G + + +
Sbjct: 745 GDALIDGGEG 754
Score = 45.5 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG + L+++ + L E+ + +T+ I +++ GND++I
Sbjct: 1444 GGRNTLNMSAVAADVKVNLLTGEA----TLGDAQLTLRSPARIHNLISGDGNDILIAGRQ 1499
Query: 286 NNVFFESSGNDVFDGSSGLDTFFY 309
++V G +V G +G + F
Sbjct: 1500 HSVLDGGRGLNVLTGGAGKEIFVV 1523
>gi|229368716|gb|ACQ62999.1| matrix metalloproteinase 24 preproprotein (predicted), 5 prime
[Dasypus novemcinctus]
Length = 245
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 48/161 (29%), Gaps = 30/161 (18%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L Q W I Y T D ++ R A W KV LTFEE H
Sbjct: 76 LTGQKWRQKHITYSIHNYTPKVGELD-------TRKAIRQAFDVWQKVTPLTFEEVPYHE 128
Query: 77 -------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
+DI ++ + P + D+
Sbjct: 129 IKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNAN 188
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + N
Sbjct: 189 HDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 229
>gi|74196364|dbj|BAE33072.1| unnamed protein product [Mus musculus]
Length = 473
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 60/185 (32%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 113 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 172
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 173 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 229
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S + YF P DI +Q
Sbjct: 230 LQHSNNPK---------------SIMYPTYRYFNPST----------FRLSADDIRNIQS 264
Query: 194 IYGAP 198
+YGAP
Sbjct: 265 LYGAP 269
>gi|73955224|ref|XP_546546.2| PREDICTED: similar to Interstitial collagenase precursor (Matrix
metalloproteinase-1) (MMP-1) (Fibroblast collagenase)
[Canis familiaris]
Length = 465
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 57/190 (30%), Gaps = 32/190 (16%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
L W + + Y+ + T ++ A WS V LTF +
Sbjct: 102 LTDGSQWDHTHLTYRIENYTPDLPRAEVDS-------AIEKAFQLWSNVSPLTFTKVFEG 154
Query: 76 HSDIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
+DI N + P +I+FD+ + W + L
Sbjct: 155 QADIMISFVWGDHRDNSPFDGPNGNLAHAFQP--GPNLGGDIHFDEDETWTNNF-RNYNL 211
Query: 121 SHNALHEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
A HE+GH+LGL H +Y + D Y Q+ +
Sbjct: 212 YRVAAHELGHSLGLSHSTDIGALMYPNYMYSGNVQLSQDDINGIQAIYGPSQNPVQPTG- 270
Query: 178 GYCATPMVSD 187
TP V D
Sbjct: 271 --PQTPQVCD 278
>gi|119387287|ref|YP_918321.1| hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
gi|119377862|gb|ABL72625.1| Hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
Length = 245
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 49/163 (30%), Gaps = 10/163 (6%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ G + + ++ G E N I + ++G SGNDV+ N+ G
Sbjct: 22 IWGRSGDDLLFGRAGNDTLDGGEGNDRIDAGSGHNRIIGGSGNDVIKALGGNDRITAGEG 81
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
NDV G +T S + + + +R
Sbjct: 82 NDVVQAGGGNNTI--SLGSGNDRSVSGGGRDTISGGEGNDT--------IRAGGGNDLIR 131
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ L A ++ +I G D + EG D+
Sbjct: 132 GGEGDDRLFGEAGHDRIIAGEGNDTLNGGRGNDTMTGGEGADV 174
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 4/119 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + GG++ + L G N ++ +I G E N TI
Sbjct: 71 GGNDRITAGEGNDVVQAGGGNNTISL----GSGNDRSVSGGGRDTISGGEGNDTIRAGGG 126
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G G+D + G + ++ GND +G G DT + ++ + I
Sbjct: 127 NDLIRGGEGDDRLFGEAGHDRIIAGEGNDTLNGGRGNDTMTGGEGADVFVWNGGRDRIT 185
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 31/207 (14%), Positives = 57/207 (27%), Gaps = 28/207 (13%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + +VG+ D + G S +++ F +GND DG G D A S +I
Sbjct: 4 IRGNDDDNRLVGTKFADQIWGRSGDDLLFGRAGNDTLDGGEGNDRI--DAGSGHNRIIGG 61
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
++ + + + +++ + G D
Sbjct: 62 SGNDVIKALGGNDRITA-----------------GEGNDVVQAGGGNNTISLGSGNDRSV 104
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
S EG D G +DL D + G +
Sbjct: 105 SGGGRDTISGGEGNDTIR-----AGGGNDLIRGGEGDDRL----FGEAGHDRIIAGEGND 155
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKD 468
L ++ + + G+D
Sbjct: 156 TLNGGRGNDTMTGGEGADVFVWNGGRD 182
>gi|27366913|ref|NP_762440.1| Autotransporter adhesin [Vibrio vulnificus CMCP6]
gi|27358480|gb|AAO07430.1|AE016809_192 Autotransporter adhesin [Vibrio vulnificus CMCP6]
Length = 5206
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 58/220 (26%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4829 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI 4888
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4889 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4947
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ S G D+
Sbjct: 4948 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNYNRINASAGNDVVK 5007
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N + A G
Sbjct: 5008 -----LMGYHAVLNGGEGEDHLIAAAISKFSQFNGGEGHD 5042
Score = 39.8 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 71/295 (24%), Gaps = 38/295 (12%)
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
Y +Y D S+++ + + V I A
Sbjct: 6 WRSVEYFFTGNYSADDGNNSIVAIGFGGEIHAYGGDDHVT---VGSIGATVYTGSGNDTV 62
Query: 202 LGNNIY----------------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+G + Y K + + G +D G +Y
Sbjct: 63 VGGSAYLRVEDTTGHLSVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGA 122
Query: 246 NTESWSSIGGYEKNMTI--AQHTVIESVVGSSGNDVVIGNSANNVFF--------ESSGN 295
+ + G N+T A + GN G A N S G+
Sbjct: 123 AAYNGITRKGLSGNVTFKGAGGYNALWHETNQGNLSFAGAGAGNKLDRTWFNRYQGSRGD 182
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD------VERLRFADQ 349
FDG+ ++ + + + L +ER R
Sbjct: 183 VTFDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTR--QA 240
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQ-DVFESMKHFYEFGLSEGRDITFDSYL 403
+ E Y L + D+ S Y +G +FD+
Sbjct: 241 EDVYAQTRGNIRFEGVGGYNSLYSDVAHGDIHFSGGGAYNTITRKGSGSSFDAQG 295
>gi|332711478|ref|ZP_08431409.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332349456|gb|EGJ29065.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 296
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 77/239 (32%), Gaps = 4/239 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + T+ +++ G+SGND + G N+ +GND G SG DT Y
Sbjct: 37 TMTGNGGDDTLIGGPKNDTLYGNSGNDKLYGEGGNDYLDGWTGNDNMYGGSGNDTLLGY- 95
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
S +Y +Y + + D + + + + L ++ ++
Sbjct: 96 -SGHDNLYGNSGNDKLYGESGNDYLDGWTGNDNMYGGSGNDTLLGYSGNDYLSGSSGHDS 154
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY-ITH 429
L G D G DI +G YD L + S + Y
Sbjct: 155 LKGESGHDTLLGGTGTDTLVGGSGNDILNGYGGTIGEYDILSGDYSSSQPGVQGSYDGAD 214
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G AF A+ D + D ++ D+ +F G Y
Sbjct: 215 TFVLGNAFGAFYLGSGYATITDFYWSEGDKFEVYGSASDYSLSFQNWSGSSAKDTLIYY 273
>gi|317124119|ref|YP_004098231.1| RTX toxins and related Ca2+-binding protein-like protein
[Intrasporangium calvum DSM 43043]
gi|315588207|gb|ADU47504.1| RTX toxins and related Ca2+-binding protein-like protein
[Intrasporangium calvum DSM 43043]
Length = 3498
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 52/414 (12%), Positives = 99/414 (23%), Gaps = 52/414 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-----SSIGGYEKNMTIA 263
+I+ D + S ++ G + N I
Sbjct: 2437 GNDHILGGDGPASIFGDTLRDTATVGAAANETCRDGSPVTSDPVPEGTTSGTGDGNDLIE 2496
Query: 264 QHTVIESVVGSSGNDVVIGN---------SANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+++V D V+ + ++V G D G SG D + +
Sbjct: 2497 GGAGVDTVSAGGARDRVLAHGSADLVCGQQGDDVLLGGDGPDRIWGGSGNDRAY--GEAD 2554
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT--------- 365
++ ++ +Y + D + ++
Sbjct: 2555 ADLVFGNDDEDQLYGQGSTDV--------IEGNDGSDRASGGDGDDLVYGGTRHAGRADT 2606
Query: 366 ------ASYEDLIQVIGQDVFESMKHF--YEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ + L G D+ + R I D G
Sbjct: 2607 GPASDPDAGDILAGDTGVDILIGDNGTVDDPLNTGDARAIPLD-----LDGATPTAGRGD 2661
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+G + +++ + D DA + VG F
Sbjct: 2662 LIYGGDGTDTAYGGLGPDKVNGGNDADHLEGNNDSDVVHGDAGEDEIVGGS-FQQAASGI 2720
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE-DL 536
GR L+ + DL + +AA V R A ++ + D
Sbjct: 2721 GR-PDAGDVLHGDAGPDLMAGDNAILASAATEADATAVTRMRGFAANHGVQLLDLDPTDT 2779
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD-LYLTSYDDLWNVFGSDRSA 589
+ G+D FG I N + Y + V G+
Sbjct: 2780 AGNWGADEIYGGDGED--VIFGQRGDDRIKGNAEDDYAEGGPGIDWVEGNAGDD 2831
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 66/528 (12%), Positives = 121/528 (22%), Gaps = 69/528 (13%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
S ++ + G + +N A + T + I
Sbjct: 2609 ASDPDAGDILAGDTGVDILIGDNGTVDDPLNTGDARAIPLDLDGATPTAGRG-DLIYGGD 2667
Query: 133 GLMHP-GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT-PMVSDIVA 190
G G G D D+ + + V+ +D ++ SF A+ D
Sbjct: 2668 GTDTAYGGLGPDKVNGGNDADHLEGNNDSDVVHGDAGEDEIVGGSFQQAASGIGRPDAGD 2727
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
V P G+N + T + +DL+
Sbjct: 2728 VLHGDAGPDLMAGDNAILASAATEADATAVTRMRGFAANH--------GVQLLDLDP--- 2776
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY- 309
+ G I + + G G+D + GN+ ++ G D +G++G D
Sbjct: 2777 TDTAGNWGADEIYGGDGEDVIFGQRGDDRIKGNAEDDYAEGGPGIDWVEGNAGDDDLVGG 2836
Query: 310 ----YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ------CIDSVNVK-- 357
+ + + A ++ + + LR + +
Sbjct: 2837 SSDPSGGADETTAGQGDVADALFGGPGDDVALGDNGQVLRPGAGQTPSSVTVRLGSTSGA 2896
Query: 358 ---------------------------QRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + L+ G DV H
Sbjct: 2897 AMTPRVIQVWDRSTGTGYLAAPPASRYGADRISGGDGVDVLLGQDGDDVITGDAHGDYVE 2956
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
+ G D F L + + AA + +
Sbjct: 2957 GNGGADSIFGD---LAFGTASAHGTPATPLAATWPGTPSAAALRVGTSTTPGQDDLIGGT 3013
Query: 451 DLINAFADAPDLVQVGKDHFSNFG------CEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ G D +G + +Y Y D G
Sbjct: 3014 PTPAYRDGGDTIEGNGADDVILGDDGSLLRTLQGTPGSLTEQVYTDRYPD-----GDVPA 3068
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
A R G + F A+ D A + G D
Sbjct: 3069 DATRSRTHDPALPGPS-TRFCLSAPTATTCDQTGASGNDRIWGDGGND 3115
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/376 (13%), Positives = 84/376 (22%), Gaps = 30/376 (7%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
LG + +I D + + ++ + G +
Sbjct: 2271 LGGTVTSKGNVLIGGLGSDSIAGGTATDTIYASTETTFGVDSPGPADTLTVKDGKDIPNI 2330
Query: 262 IAQHTVIESVVGSSGNDVVIGNS------------ANNVFFESSGNDVFDGSSGLDTFFY 309
I T + V GS+ D+V +S + G+D G G D
Sbjct: 2331 IETGTGNDVVYGSNAEDIVTSHSEKAQKARILGGGGPDALVGGYGSDEIFGGPGDDYVIA 2390
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
V + L + + + V +
Sbjct: 2391 EPSEVGALGSTQHQIEGVSFGLKRTVTHLPLPPNTSPSAKTL--VGGLGNDHILGGDGPA 2448
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFD-----SYLYLGSYDDLR-NVFGSDRGA-- 421
+ +D +G +T D + G +DL G D +
Sbjct: 2449 SIFGDTLRDTATVGA-AANETCRDGSPVTSDPVPEGTTSGTGDGNDLIEGGAGVDTVSAG 2507
Query: 422 -AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
A + HG + + D I + +E +
Sbjct: 2508 GARDRVLAHGSADLVCGQQGDDVLLGGDGPDRIWGGSGNDRAYGEADADLVFGNDDEDQL 2567
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAA----ARHYITHGVKEGRNPDAFKALEYIASHEDL 536
S + D G D RH +PDA L + L
Sbjct: 2568 YGQGSTDVIEGNDGSDRASGGDGDDLVYGGTRHAGRADTGPASDPDAGDILAGDTGVDIL 2627
Query: 537 INAFAD--APDLVQAG 550
I P
Sbjct: 2628 IGDNGTVDDPLNTGDA 2643
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 41/344 (11%), Positives = 88/344 (25%), Gaps = 21/344 (6%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
++ + ++ + + D DV + + I
Sbjct: 2908 RSTGTGYLAAPPASRYGADRISGGDGVDVLLGQDGDDVITGDAHGDYVEGNGGADSIFG- 2966
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
L + G P + + ++ D G TP D
Sbjct: 2967 -DLAFGTASAHGTPATPLAATWPGTPSAAALRVGTSTTPGQDDLIGGTP-TPAYRDGGDT 3024
Query: 192 QKIYGAPKGSLGNN------------IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ GA LG++ +V P D+ D L G
Sbjct: 3025 IEGNGADDVILGDDGSLLRTLQGTPGSLTEQVYTDRYPDGDVPADATRSRTHDPALPGPS 3084
Query: 240 KNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ + + G N I + + G GND + G ++ + G+D
Sbjct: 3085 TRFCLSAPTATTCDQTGASGNDRIWGDGGNDGIWGQDGNDQISGGDGDDDLYGELGDDRI 3144
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK--QDFLSDVERLRFADQCIDSVNV 356
+G +G D + + + + + + + R + + +V
Sbjct: 3145 NGDAGEDAILGDRGGVVNQRLSAGDEPMQFTETLQNPPMETFTGFRRGDYDRRADLLHDV 3204
Query: 357 KQRSILEYTASYEDLIQVI---GQDVFESMKHFYEFGLSEGRDI 397
+ + + G+D+ G D+
Sbjct: 3205 DGDQWIGTSTGTPMPHAGLTEGGRDLIRGGPDADTIHAGFGDDV 3248
>gi|218886262|ref|YP_002435583.1| Hemolysin-type calcium-binding region [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757216|gb|ACL08115.1| Hemolysin-type calcium-binding region [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 2537
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 67/210 (31%), Gaps = 6/210 (2%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D + I + +I G + I + + G SGNDV+ G N+V
Sbjct: 2297 FDGSDDAHGIGLIVAGSAHGDTITGSSGDDRIHGGAGNDHLYGGSGNDVLHGGDGNDVLH 2356
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
GND DG +G++T + A ++ V D DF L D
Sbjct: 2357 GGDGNDYLDGGAGVNTLYGDAGDDTLVVHDTGGGTGVADGYLDNHDFAG----LHGGDGY 2412
Query: 351 IDSVNVKQRSILEYTA-SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS-YLYLGSY 408
+ + L+++ + + + + D+ L + S + G
Sbjct: 2413 DTLLVQGEDVTLDFSRIAADTVTGIEAIDLTAHGAQHVTLSLDDLTSSDTGSLAVVFGET 2472
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
L + AA +T G +
Sbjct: 2473 PVLSASTAASSEHAADGSVTFTAARGDSVT 2502
>gi|284045307|ref|YP_003395647.1| Hemolysin-type calcium-binding region [Conexibacter woesei DSM
14684]
gi|283949528|gb|ADB52272.1| Hemolysin-type calcium-binding region [Conexibacter woesei DSM
14684]
Length = 472
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 78/282 (27%), Gaps = 30/282 (10%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
D A+ A G G++ + + + G+D+LD T
Sbjct: 101 GDDSALLATNAAVDGGPGDDRL----RAEREAGYVSFIGGEGNDVLDATDPNA------- 149
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
S++ G + ++ + ++G +G+D + N+ G D DG +G D
Sbjct: 150 -----STLDGGPGDDVLSGSGGEDGLIGGAGDDQLSAARGNDFLTPGPGADDVDGGAGRD 204
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCIDSVNVKQRSILEY 364
F + +D +E + D + +++
Sbjct: 205 LF-------SHADRGTTPLTFALTDGRTGEDPRAVGIEDVIGGDGADRITGDDRPNLILG 257
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ +DL G D + G D + D G+DR
Sbjct: 258 SGGNDDLAARGGDDEVDGDGGADTLDGGPGADHVYGRRAAWRGPLDSSERDGADRLRGGP 317
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
++G + D + A G
Sbjct: 318 G------RDGLDGGPGADRLTCDGGFDHVAAGDGDRLPTPAG 353
>gi|288960450|ref|YP_003450790.1| haemolysin-type calcium-binding region-containing protein
[Azospirillum sp. B510]
gi|288912758|dbj|BAI74246.1| haemolysin-type calcium-binding region-containing protein
[Azospirillum sp. B510]
Length = 272
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 50/167 (29%), Gaps = 3/167 (1%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G + + T I G + N ++++G G+DV+ G + +V +G DV
Sbjct: 6 GGSYDVHVGTNHDDLIVGGQGNDLSLGGNGNDTLLGGDGHDVLSGGNGADVIHGGTGADV 65
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNV 356
G SG D S I ++ D + + L D
Sbjct: 66 LLGGSGSDII--DGGSGDDIILGGNGDDVLIGGAGRDVLDGGNGDDVLSGGDGNDVLTGG 123
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
K L + L G D+ +G D F
Sbjct: 124 KGDDTLMGGGHDDILDGGKGDDILHGGTGNDILKGGDGDDTLFGDDG 170
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 41/118 (34%), Gaps = 4/118 (3%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ G+D+L GG + + + G + + + T +
Sbjct: 100 DVLDGGNGDDVLSGGDGNDVLT----GGKGDDTLMGGGHDDILDGGKGDDILHGGTGNDI 155
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ G G+D + G+ ++ G+D+ G +G D F + + F+ +
Sbjct: 156 LKGGDGDDTLFGDDGDDRLEGGKGDDILSGGAGHDVFIFSGGGGQDMVLDFKAGEDIL 213
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/213 (15%), Positives = 54/213 (25%), Gaps = 19/213 (8%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S+ G + I + +G +GND ++G ++V +G DV G +G D
Sbjct: 6 GGSYDVHVGTNHDDLIVGGQGNDLSLGGNGNDTLLGGDGHDVLSGGNGADVIHGGTGAD- 64
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
S I I+ N + R +L+
Sbjct: 65 -VLLGGSGSDIIDGGSGDDIILGGN-----------------GDDVLIGGAGRDVLDGGN 106
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L G DV K DI + N +
Sbjct: 107 GDDVLSGGDGNDVLTGGKGDDTLMGGGHDDILDGGKGDDILHGGTGNDILKGGDGDDTLF 166
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
G L A H+ I +
Sbjct: 167 GDDGDDRLEGGKGDDILSGGAGHDVFIFSGGGG 199
Score = 40.2 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 27/206 (13%), Positives = 58/206 (28%), Gaps = 38/206 (18%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
VG++ +D+++G N++ +GND G G D + I+ A ++
Sbjct: 13 VGTNHDDLIVGGQGNDLSLGGNGNDTLLGGDGHD--VLSGGNGADVIHGGTGADVLL--- 67
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
I++ + + ++ G DV
Sbjct: 68 -----------------------GGSGSDIIDGGSGDDIILGGNGDDVLIGGAGRDVLDG 104
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
G D+ G +D+ D + G + + + + + D
Sbjct: 105 GNGDDVL-----SGGDGNDVLTGGKGDDTL-----MGGGHDDILDGGKGDDILHGGTGND 154
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEE 477
++ L D G +
Sbjct: 155 ILKGGDGDDTLFGDDGDDRLEGGKGD 180
>gi|157688252|gb|ABQ02443.1| enterohemolysin [Escherichia coli]
Length = 998
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 51/186 (27%), Gaps = 28/186 (15%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G + N I + + + G G+D + G ++ F SGND G G + +
Sbjct: 721 NDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNN--YL 778
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S ++ I+ +L+ +
Sbjct: 779 TGGSGNDELQAHGAYNILSGGT-----------------GDDKLYGGGGIDLLDGGEGND 821
Query: 370 DLIQVIGQDV----FESMKHFYEFGLSEGR-----DITFDSYLYLGSYDDLRNVFGSDRG 420
L G D+ H +G DI+FD + +DL +
Sbjct: 822 YLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLSDISFDDIAFKRVGNDLIMNKAINGV 881
Query: 421 AAARHY 426
+
Sbjct: 882 LSFNES 887
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 54/200 (27%), Gaps = 33/200 (16%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYR 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKAINGVLSFNESND 889
Query: 370 D----LIQVIGQDVFESMKH 385
+D + H
Sbjct: 890 VNGITFKNWFAKDASGADNH 909
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 56/197 (28%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKRVGNDLI 873
>gi|126727017|ref|ZP_01742855.1| type I secretion target repeat protein [Rhodobacterales bacterium
HTCC2150]
gi|126703689|gb|EBA02784.1| type I secretion target repeat protein [Rhodobacterales bacterium
HTCC2150]
Length = 456
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 69/264 (26%), Gaps = 8/264 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G + ++ G + + ++ G + I+ + + G D + G N
Sbjct: 107 GTITENDSITGTNLTDVFSSGAGKDTVFGGDGEDVISGGAQSDKLYGDDDADDLYGGLGN 166
Query: 287 NVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ + + ND G G D + +Y L K++ +Y + + +
Sbjct: 167 DALYGGAANDTMYGDEGNDKLYGGADSDSFYGGVGLDKLFGGTENDSLYGGENNDKIYGQ 226
Query: 340 -DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++L D L + L DV + G D
Sbjct: 227 DGADKLYGGDDKDVLFGGAGTDTLVGDDGGDKLFGNGAVDVLYGGSGKDTLYGNSGNDTL 286
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
F + + A + G E + L A + L D
Sbjct: 287 FGGDDQDVLFGGNHSDVMYGGDFADSFFGGVGNDEAYGGNGNDVLRGQAGEDTLDGGAND 346
Query: 459 APDLVQVGKDHFSNFGCEEGRFVT 482
G D ++
Sbjct: 347 DQLFGGGGNDTLIGGSGDDTMSGG 370
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/278 (12%), Positives = 74/278 (26%), Gaps = 3/278 (1%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D ++ + +N T T+ + + G + +D + G+ +
Sbjct: 100 DYNNIAIGTITENDSITGTNLTDVFSSGAGKDTVFGGDGEDVISGGAQSDKLYGDDDADD 159
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFA 347
+ GND G + DT + K+Y ++ Y K ++ + L
Sbjct: 160 LYGGLGNDALYGGAANDTMY--GDEGNDKLYGGADSDSFYGGVGLDKLFGGTENDSLYGG 217
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ L + L G D + + D+ +
Sbjct: 218 ENNDKIYGQDGADKLYGGDDKDVLFGGAGTDTLVGDDGGDKLFGNGAVDVLYGGSGKDTL 277
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
Y + N + + D + +++ + Q G+
Sbjct: 278 YGNSGNDTLFGGDDQDVLFGGNHSDVMYGGDFADSFFGGVGNDEAYGGNGNDVLRGQAGE 337
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
D ++ F + +G D GS
Sbjct: 338 DTLDGGANDDQLFGGGGNDTLIGGSGDDTMSGGSGLDT 375
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 63/236 (26%), Gaps = 8/236 (3%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D G + +GL +YG +N+
Sbjct: 162 GGLGNDALYGGAANDTMYGDEGNDKLYGGADSDSFYGGVGLDKLFGGTENDSLYGGENN- 220
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ + D + T + D GA G +
Sbjct: 221 DKIYGQDGADKLYGGDDKDVLFGGAGTDTLVGDDGGDKLFGNGAVDVLYGG---SGKDTL 277
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ T++ D+L GG + + + S G N + + G
Sbjct: 278 YGNSGNDTLFGGDDQDVL----FGGNHSDVMYGGDFADSFFGGVGNDEAYGGNGNDVLRG 333
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+G D + G + ++ F GND G SG DT + + I+ D
Sbjct: 334 QAGEDTLDGGANDDQLFGGGGNDTLIGGSGDDTMSGGSGLDTFIFVDGFGVDIITD 389
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 66/297 (22%), Gaps = 40/297 (13%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N+ I T +S+ G++ DV + + F G DV G + D +
Sbjct: 100 DYNNIAIGTITENDSITGTNLTDVFSSGAGKDTVFGGDGEDVISGGAQSDKLY------- 152
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
D D L A+ + +
Sbjct: 153 ------------------------------GDDDADDLYGGLGNDALYGGAANDTMYGDE 182
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D F G D F Y N + A + Y
Sbjct: 183 GNDKLYGGADSDSFYGGVGLDKLFGGTENDSLYGGENNDKIYGQDGADKLYGGDDKDVLF 242
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
L + L A GKD + F D + G
Sbjct: 243 GGAGTDTLVGDDGGDKLFGNGAVDVLYGGSGKDTLYGNSGNDTLFGGDDQDVLFGGNHSD 302
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G A + G E + L A + L D G D
Sbjct: 303 VMYGGD---FADSFFGGVGNDEAYGGNGNDVLRGQAGEDTLDGGANDDQLFGGGGND 356
Score = 39.4 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 28/246 (11%), Positives = 53/246 (21%), Gaps = 3/246 (1%)
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + V D N +++ + + + + + +
Sbjct: 78 AVEASGTLSAISSGPFAPGAVLDYNNIAIGTITENDSITGTNLTDVFSSGAGKDTVFGGD 137
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + D + G D + Y D N + Y
Sbjct: 138 GEDVISGGAQSDKLYGDDDADDLYGGLGNDALYGGAANDTMYGDEGNDKLYGGADSDSFY 197
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
G+ + +L Y + D I A L G V D
Sbjct: 198 GGVGLDKLFGGTENDSL-YGGENNDKIYGQDGADKLYGGDDKDVLFGGAGTDTLVGDDGG 256
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
L + ++G Y G D L + +
Sbjct: 257 DKLFGNGAVDVLYGGSGKDTL--YGNSGNDTLFGGDDQDVLFGGNHSDVMYGGDFADSFF 314
Query: 547 VQAGKD 552
G D
Sbjct: 315 GGVGND 320
>gi|307293860|ref|ZP_07573704.1| Phytanoyl-CoA dioxygenase [Sphingobium chlorophenolicum L-1]
gi|306880011|gb|EFN11228.1| Phytanoyl-CoA dioxygenase [Sphingobium chlorophenolicum L-1]
Length = 460
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 20/138 (14%)
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-------AFKALEYI 530
+ FD LYL D+ A H+ +G +E R D F Y
Sbjct: 36 PNEIMFDPQLYLLRNPDVAAAG----VDARLHWEQYGREEERRGDRKSWWAPHFDEEAYR 91
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT------FNPDLYLTSYDDLWNVFG 584
A+H D + A + + A +HF G + RS + F+ Y + +
Sbjct: 92 AAHPDALLAIEEGRFVSGA--EHFLAIGRAQLRSGSQIAPEGFSESDYRMTRPSVGQAID 149
Query: 585 SDRS-AAAQHYITHGMKE 601
+ + H++ G E
Sbjct: 150 AGIYVSGYDHWLQWGSHE 167
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 23/136 (16%)
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--------FDSYLYLGS 491
F Y+ + D+ A D + H+ +G EE R FD Y +
Sbjct: 41 FDPQLYLLRNPDVAAAGVD-------ARLHWEQYGREEERRGDRKSWWAPHFDEEAYRAA 93
Query: 492 YDDLRNVFGSD-RGAAARHYITHGVKEGRN-----PDAFKALEYIASHEDLINAFADAPD 545
+ D + A H++ G + R+ P+ F +Y + + A
Sbjct: 94 HPDALLAIEEGRFVSGAEHFLAIGRAQLRSGSQIAPEGFSESDYRMTRPSVGQAI--DAG 151
Query: 546 LVQAGKDHFSNFGYEE 561
+ +G DH+ +G E
Sbjct: 152 IYVSGYDHWLQWGSHE 167
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 45/137 (32%), Gaps = 20/137 (14%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-------AFKALEYIA 447
+I FD LYL D+ A H+ +G +E R D F Y A
Sbjct: 37 NEIMFDPQLYLLRNPDVAAA----GVDARLHWEQYGREEERRGDRKSWWAPHFDEEAYRA 92
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV------TFDSYLYLGSYDDLRNVFGS 501
+H D + A + G +HF G + R F Y + + +
Sbjct: 93 AHPDALLAIEEG--RFVSGAEHFLAIGRAQLRSGSQIAPEGFSESDYRMTRPSVGQAIDA 150
Query: 502 DR-GAAARHYITHGVKE 517
+ H++ G E
Sbjct: 151 GIYVSGYDHWLQWGSHE 167
Score = 40.5 bits (93), Expect = 0.90, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
F+P LYL D+ A H+ +G +E R
Sbjct: 41 FDPQLYLLRNPDVAAA----GVDARLHWEQYGREEERRG 75
>gi|254848571|ref|ZP_05237921.1| RTX toxin RtxA [Vibrio cholerae MO10]
gi|254844276|gb|EET22690.1| RTX toxin RtxA [Vibrio cholerae MO10]
Length = 4558
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 57/220 (25%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4181 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKSNI 4240
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4241 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4299
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ G D+
Sbjct: 4300 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVVK 4359
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 4360 -----LMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 4394
Score = 39.0 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 57/193 (29%), Gaps = 25/193 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNM--- 260
+ I ++ GDD + GG + + +++ + +
Sbjct: 4264 GNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSV 4323
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYA 311
TI + +E +GND N +GNDV +G G D A
Sbjct: 4324 TIGNNNQVE---LGAGNDFANIFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIATA 4380
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRSILEYTA 366
S + E ++ +DV+ + ID + + +
Sbjct: 4381 ISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGID 4440
Query: 367 SYEDLIQVIGQDV 379
+ + G D+
Sbjct: 4441 WQKLWFERSGYDL 4453
Score = 38.2 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 65/265 (24%), Gaps = 33/265 (12%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ Y A ++IVA+ G Y + T+Y G+D +
Sbjct: 26 FTGNYSADDGNNNIVAIGF--GGQIH-----AYGGDDHVTVGSIGATVYTGSGNDTVVGG 78
Query: 235 L------IGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSA 285
+ + N++ A I+ + G+ G+ G +A
Sbjct: 79 SAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHL-GNHGDVSYGGAAA 137
Query: 286 NNVFF--ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N SGN F G+ G + ++ + ++
Sbjct: 138 YNGITRKGLSGNVTFAGAGGYNALWHETNQGNLSFTGAGAGNKLDRTWSNRYQGSHGDVT 197
Query: 344 LRFADQCIDSVN--VKQRSILEYTASYEDLI------------QVIGQDVFESMKHFYEF 389
A + + L+ + + + +
Sbjct: 198 FDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTHQAEDVY 257
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNV 414
+ G Y Y D+ +
Sbjct: 258 TQTRGNIRFEGVGGYNSLYSDVAHG 282
Score = 38.2 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 38/164 (23%), Gaps = 11/164 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + N + +G G + ++ S SG DT
Sbjct: 21 SVEYFFTGNYSADDGNNNIVAIGFGG--QIHAYGGDDHVTVGSIGATVYTGSGNDTVV-- 76
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTA 366
S K+ +IV A + S + FA ID + A
Sbjct: 77 GGSAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAA 136
Query: 367 SYE--DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+Y + G F + E
Sbjct: 137 AYNGITRKGLSGNVTFAGAGGYNAL-WHETNQGNLSFTGAGAGN 179
>gi|15641462|ref|NP_231094.1| RTX toxin RtxA [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|9655951|gb|AAF94608.1| RTX toxin RtxA [Vibrio cholerae O1 biovar El Tor str. N16961]
Length = 4558
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 57/220 (25%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4181 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKSNI 4240
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4241 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4299
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ G D+
Sbjct: 4300 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVVK 4359
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 4360 -----LMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 4394
Score = 39.0 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 57/193 (29%), Gaps = 25/193 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNM--- 260
+ I ++ GDD + GG + + +++ + +
Sbjct: 4264 GNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSV 4323
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYA 311
TI + +E +GND N +GNDV +G G D A
Sbjct: 4324 TIGNNNQVE---LGAGNDFANIFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIATA 4380
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRSILEYTA 366
S + E ++ +DV+ + ID + + +
Sbjct: 4381 ISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGID 4440
Query: 367 SYEDLIQVIGQDV 379
+ + G D+
Sbjct: 4441 WQKLWFERSGYDL 4453
Score = 38.2 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 65/265 (24%), Gaps = 33/265 (12%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ Y A ++IVA+ G Y + T+Y G+D +
Sbjct: 26 FTGNYSADDGNNNIVAIGF--GGQIH-----AYGGDDHVTVGSIGATVYTGSGNDTVVGG 78
Query: 235 L------IGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSA 285
+ + N++ A I+ + G+ G+ G +A
Sbjct: 79 SAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHL-GNHGDVSYGGAAA 137
Query: 286 NNVFF--ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N SGN F G+ G + ++ + ++
Sbjct: 138 YNGITRKGLSGNVTFAGAGGYNALWHETNQGNLSFTGAGAGNKLDRTWSNRYQGSHGDVT 197
Query: 344 LRFADQCIDSVN--VKQRSILEYTASYEDLI------------QVIGQDVFESMKHFYEF 389
A + + L+ + + + +
Sbjct: 198 FDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTHQAEDVY 257
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNV 414
+ G Y Y D+ +
Sbjct: 258 TQTRGNIRFEGVGGYNSLYSDVAHG 282
Score = 38.2 bits (87), Expect = 5.1, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 38/164 (23%), Gaps = 11/164 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + N + +G G + ++ S SG DT
Sbjct: 21 SVEYFFTGNYSADDGNNNIVAIGFGG--QIHAYGGDDHVTVGSIGATVYTGSGNDTVV-- 76
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTA 366
S K+ +IV A + S + FA ID + A
Sbjct: 77 GGSAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAA 136
Query: 367 SYE--DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+Y + G F + E
Sbjct: 137 AYNGITRKGLSGNVTFAGAGGYNAL-WHETNQGNLSFTGAGAGN 179
>gi|291566647|dbj|BAI88919.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 303
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 52/162 (32%), Gaps = 19/162 (11%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D T+ G L + S+ G N TI ++++G +GND++ GN +
Sbjct: 68 TDSAGETVRGTGAADRILGGDGPDSLLGGSNNDTIYGGPGSDTLLGEAGNDLLFGNQGRD 127
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ + +GND G DT + A L F N + D L
Sbjct: 128 LLYGGNGNDTLYGGQEADTLYGEAGDDLL----FGNLANDWLYGGDGNDTL--------- 174
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
K IL + L G D + F
Sbjct: 175 ------FGGKNDDILYGGDGNDLLSGDTGADTLIGGEGRDSF 210
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 52/165 (31%), Gaps = 12/165 (7%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
G N I + + ++ G I +S++G S ND + G ++
Sbjct: 55 TLSSNGSVNEITVTDSAGETVRGTGAADRILGGDGPDSLLGGSNNDTIYGGPGSDTLLGE 114
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+GND+ G+ G D +Y +Y E + + L F + D
Sbjct: 115 AGNDLLFGNQGRD-----------LLYGGNGNDTLYGGQEADTLYGEAGDDLLFGNLAND 163
Query: 353 -SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
L + + L G D+ EGRD
Sbjct: 164 WLYGGDGNDTLFGGKNDDILYGGDGNDLLSGDTGADTLIGGEGRD 208
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 5/125 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
P T+ G+DLL L GG N + ++ G + +
Sbjct: 97 SNNDTIYGGPGSDTLLGEAGNDLLFGNQGRDLLYGGNGNDTLYGGQEADTLYGEAGDDLL 156
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + + G GND + G +++ + GND+ G +G DT + +
Sbjct: 157 FGNLANDWLYGGDGNDTLFGGKNDDILYGGDGNDLLSGDTGADTLIGGEGRDSFVVSSLS 216
Query: 323 NAIIV 327
+ +
Sbjct: 217 GGVNI 221
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 56/204 (27%), Gaps = 28/204 (13%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ +V E V S + V G A + G D G S DT + +
Sbjct: 58 SNGSVNEITVTDSAGETVRGTGAADRILGGDGPDSLLGGSNNDTIY--GGPGSDTLLGEA 115
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+++ +D L L + L G D+
Sbjct: 116 GNDLLF--GNQGRDLL---------------YGGNGNDTLYGGQEADTLYGEAGDDLLFG 158
Query: 383 MKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGA----AARHYITHGVKEG 434
+G D F D LY G +DL + ++ + G
Sbjct: 159 NLANDWLYGGDGNDTLFGGKNDDILYGGDGNDLLSGDTGADTLIGGEGRDSFVVSSLSGG 218
Query: 435 RNPDAFKALE-YIASHEDLINAFA 457
N + Y S +D++ +
Sbjct: 219 VNIPEADVIMDYTPSDDDILLSGG 242
Score = 44.0 bits (102), Expect = 0.083, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 37/156 (23%)
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N I V D+ +R+ D + + + L+ G D+
Sbjct: 63 NEITVTDSAGETVRGTGAADRILGGDGPDSLLGGSNNDTIYGGPGSDTLLGEAGNDLLFG 122
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ G D + Y + + A Y G
Sbjct: 123 NQGRDLLYGGNGNDTLYGGQEADTLYGEAGDDLLFGNLANDWLYGGDGNDTLFGGKNDDI 182
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
L ++ L + G+D F G
Sbjct: 183 LYGGDGNDLLSGDTGADTLIGGEGRDSFVVSSLSGG 218
>gi|296196996|ref|XP_002746081.1| PREDICTED: interstitial collagenase isoform 1 [Callithrix jacchus]
Length = 471
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 54/185 (29%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIK 80
W + Y+ + T D+ A WS V LTF + +DI
Sbjct: 110 RWEKTHLTYRIENYTPDLPRADVD-------HAIEKAFQLWSNVTPLTFTKVPKGQADIM 162
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ ++W + L A
Sbjct: 163 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDEMWTNNF-REYNLYRVAA 219
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 220 HELGHSLGLSHSTDIGALMFPSYTFSGDVQLAQDDINGIQAIYGRSQNPVQPTG---PQT 276
Query: 183 PMVSD 187
P V D
Sbjct: 277 PQVCD 281
>gi|227081623|ref|YP_002810174.1| RTX toxin RtxA [Vibrio cholerae M66-2]
gi|298498470|ref|ZP_07008277.1| RTX toxin RtxA [Vibrio cholerae MAK 757]
gi|298499366|ref|ZP_07009172.1| RTX toxin RtxA [Vibrio cholerae MAK 757]
gi|227009511|gb|ACP05723.1| RTX toxin RtxA [Vibrio cholerae M66-2]
gi|297541347|gb|EFH77398.1| RTX toxin RtxA [Vibrio cholerae MAK 757]
gi|297542803|gb|EFH78853.1| RTX toxin RtxA [Vibrio cholerae MAK 757]
Length = 4558
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 57/220 (25%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4181 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKSNI 4240
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4241 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4299
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ G D+
Sbjct: 4300 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVVK 4359
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 4360 -----LMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 4394
Score = 39.0 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 57/193 (29%), Gaps = 25/193 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNM--- 260
+ I ++ GDD + GG + + +++ + +
Sbjct: 4264 GNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSV 4323
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYA 311
TI + +E +GND N +GNDV +G G D A
Sbjct: 4324 TIGNNNQVE---LGAGNDFANIFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIATA 4380
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRSILEYTA 366
S + E ++ +DV+ + ID + + +
Sbjct: 4381 ISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGID 4440
Query: 367 SYEDLIQVIGQDV 379
+ + G D+
Sbjct: 4441 WQKLWFERSGYDL 4453
Score = 38.2 bits (87), Expect = 4.2, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 65/265 (24%), Gaps = 33/265 (12%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ Y A ++IVA+ G Y + T+Y G+D +
Sbjct: 26 FTGNYSADDGNNNIVAIGF--GGQIH-----AYGGDDHVTVGSIGATVYTGSGNDTVVGG 78
Query: 235 L------IGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSA 285
+ + N++ A I+ + G+ G+ G +A
Sbjct: 79 SAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHL-GNHGDVSYGGAAA 137
Query: 286 NNVFF--ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N SGN F G+ G + ++ + ++
Sbjct: 138 YNGITRKGLSGNVTFAGAGGYNALWHETNQGNLSFTGAGAGNKLDRTWSNRYQGSHGDVT 197
Query: 344 LRFADQCIDSVN--VKQRSILEYTASYEDLI------------QVIGQDVFESMKHFYEF 389
A + + L+ + + + +
Sbjct: 198 FDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTHQAEDVY 257
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNV 414
+ G Y Y D+ +
Sbjct: 258 TQTRGNIRFEGVGGYNSLYSDVAHG 282
Score = 38.2 bits (87), Expect = 5.1, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 38/164 (23%), Gaps = 11/164 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + N + +G G + ++ S SG DT
Sbjct: 21 SVEYFFTGNYSADDGNNNIVAIGFGG--QIHAYGGDDHVTVGSIGATVYTGSGNDTVV-- 76
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTA 366
S K+ +IV A + S + FA ID + A
Sbjct: 77 GGSAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAA 136
Query: 367 SYE--DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+Y + G F + E
Sbjct: 137 AYNGITRKGLSGNVTFAGAGGYNAL-WHETNQGNLSFTGAGAGN 179
>gi|126208432|ref|YP_001053657.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae L20]
gi|126097224|gb|ABN74052.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 956
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 9/234 (3%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFM--PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G +D +D S Y + Y V D A+ + +
Sbjct: 624 GSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHETIATHQT 683
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++GN KIE +++D F + ++ + N I ++ G
Sbjct: 684 NVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQF-NDIFKGSQFDDVFHGGNGVD 742
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + + + G +G+DV+ G + NN +GND+ G D + + I
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 321 FENAIIVYDANEHKQDFL-----SDVERLRFADQCIDSVN-VKQRSILEYTASY 368
+ ++ + +D S +E + + + N + + A+Y
Sbjct: 803 SGGQDTLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRIGNWFLEDDLASTVANY 856
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 60/212 (28%), Gaps = 61/212 (28%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT----ESWS------------- 251
I G D + + ID S+S
Sbjct: 617 GNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHE 676
Query: 252 SIGGYEKNMT--------------------------------------IAQHTVIESVV- 272
+I ++ N+ I + + + V
Sbjct: 677 TIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQFNDIFKGSQFDDVFH 736
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G D + GN ++ F +G+DV DG +G + F + I ++ I
Sbjct: 737 GGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNN--FLVGGTGNDIISGGKDNDIYVHKTG 794
Query: 333 HKQDFLSDV---ERLRFADQCIDSVNVKQRSI 361
D ++D + L F+D + + K+
Sbjct: 795 DGNDSITDSGGQDTLAFSDVNLKDLTFKKVDS 826
Score = 40.9 bits (94), Expect = 0.78, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 54/219 (24%), Gaps = 48/219 (21%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG---------- 303
N+ ++ T I +GND V S+ V G+D S G
Sbjct: 596 FDDAGNIIESKDTKI-IANLGAGNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDAT 654
Query: 304 --------------LDTFFYYAPSYLYKIYRFENAIIVYDANEHK--------QDFLSDV 341
D+ + ++ + E D L V
Sbjct: 655 AETEKGSYSVKRYVGDSKALHETIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSV 714
Query: 342 ERL---RFAD------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
E + +F D ++ + L G DV +
Sbjct: 715 EEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGG 774
Query: 393 EGRDIT---FDSYLY---LGSYDDLRNVFGSDRGAAARH 425
G DI D+ +Y G +D G A
Sbjct: 775 TGNDIISGGKDNDIYVHKTGDGNDSITDSGGQDTLAFSD 813
>gi|330828501|ref|YP_004391453.1| RTX protein [Aeromonas veronii B565]
gi|328803637|gb|AEB48836.1| RTX protein [Aeromonas veronii B565]
Length = 2390
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 28/129 (21%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G GND++ G +++ F +GND+ G +G DT + S +Y +Y
Sbjct: 2189 DVLIGGEGNDILFGQGGDDILFGGAGNDILFGGAGNDTLY--GESGNDTLYGGSGNDTLY 2246
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
L S + L+ +G D+ +
Sbjct: 2247 --------------------------GGSGDDTLSGGLSNDILVGGLGNDILKGDGGADT 2280
Query: 389 FGLSEGRDI 397
F +G +
Sbjct: 2281 FTWLQGDTV 2289
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 83/283 (29%), Gaps = 20/283 (7%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S + S+ Y + FM + + G G S + ++ G
Sbjct: 2005 SSNGYTIIDSAGRVYADGRYSNPIGFMRPDGRGGYTYSTLDGDGGTTSSSTINNSVAGFG 2064
Query: 134 LMHPGSYN------GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS-FGYCATPMVS 186
L+ G Y Y++D + + ++ ++++ S + +
Sbjct: 2065 LLTGMGVTVEAIGLGANISYNDLKSYDSDGVIMTGVNASDLANAILGTSVNNLPGSDRID 2124
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEV---QQKDSPFIQTIYDSGGDDLLDL------TLIG 237
++G G N ++ D+ D +
Sbjct: 2125 GGAGDDILFGDAIHFAGINGEGYAAIKQYVAGKLSAGSVTDAQVHDYITDHASEFDQSST 2184
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
K + + E + G + + + + G +GND + G S N+ + SGND
Sbjct: 2185 NDKADVLIGGEGNDILFGQGGDDILFGGAGNDILFGGAGNDTLYGESGNDTLYGGSGNDT 2244
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G SG DT + I+ + D +
Sbjct: 2245 LYGGSGDDTL--SGGLSNDILVGGLGNDILK--GDGGADTFTW 2283
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 52/362 (14%), Positives = 99/362 (27%), Gaps = 32/362 (8%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA--P 198
G P Y + N+ N L S + + + + S+ + G
Sbjct: 1961 TDGQPTYYLGNEGSNPRVLNFSGSSYDVYLNSLLGGTYIPSRVYSSNGYTIIDSAGRVYA 2020
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE---------- 248
G N I + + T+ GG +
Sbjct: 2021 DGRYSNPIGFMRPDGRGGYTYSTLDGDGGTTSSSTINNSVAGFGLLTGMGVTVEAIGLGA 2080
Query: 249 --SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS---- 302
S++ + Y+ + I + + V ++ +G+D+ G +
Sbjct: 2081 NISYNDLKSYDSDGVIMTGVNASDLANAILGTSVNNLPGSDRIDGGAGDDILFGDAIHFA 2140
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G++ Y A ++ +++ D S+ ++ D+ + + IL
Sbjct: 2141 GINGEGYAAIKQYVAGKLSAGSVTDAQVHDYITDHASEFDQSSTNDKADVLIGGEGNDIL 2200
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDD-------- 410
+ L G D+ G D + + LY GS DD
Sbjct: 2201 FGQGGDDILFGGAGNDILFGGAGNDTLYGESGNDTLYGGSGNDTLYGGSGDDTLSGGLSN 2260
Query: 411 --LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
L G+D T +G A +Y+ D DL+
Sbjct: 2261 DILVGGLGNDILKGDGGADTFTWLQGDTVVDSVAKDYVVDFSKTEGDKLDLSDLLDHDGS 2320
Query: 469 HF 470
H
Sbjct: 2321 HS 2322
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 68/199 (34%), Gaps = 18/199 (9%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
Y + D + + +V DI+AV GN I Q S I T
Sbjct: 1487 YATLGYQISDGANLSNSGKLVIDIMAVADKPVVDISLTGNGIPLY--TQYPSSGISTGAF 1544
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+ + G + D T +GG + ++ + VG +GNDV++G +
Sbjct: 1545 QSGN--FNKGNFGITNSLTDSTTSQDQVVGGNGNDYIVSVKGGGDYFVGGAGNDVLVGGN 1602
Query: 285 -----------ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
N++ G D G +G D Y I R + + E+
Sbjct: 1603 STSGDTLDGATGNDILVAGLGGDTLFGGAGTDLAVLMGSRANYVIERRSDGGFNFLVKEN 1662
Query: 334 KQD---FLSDVERLRFADQ 349
L D+E ++F D
Sbjct: 1663 GITISKSLYDIELVQFDDG 1681
>gi|145219250|ref|YP_001129959.1| hypothetical protein Cvib_0435 [Prosthecochloris vibrioformis DSM
265]
gi|145205414|gb|ABP36457.1| conserved hypothetical protein [Chlorobium phaeovibrioides DSM 265]
Length = 7428
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/302 (15%), Positives = 96/302 (31%), Gaps = 23/302 (7%)
Query: 65 VVDLTFEETSIHS----DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
++LT E S + F S T S + + G GT
Sbjct: 2422 ALNLTLTEISDTAAEINTADFADSAYSTFTTITNTSGVAELTATELGERAITLAGDGTFQ 2481
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
+ E+ AL + + + + + + +++
Sbjct: 2482 VTGTVDELL-ALDAAVYDNTDTLIISDTANEISTLTTTEIAELISRGIDQILVNDGNTVE 2540
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
T I + + + + + + SG DDLL
Sbjct: 2541 FT-----IAQTRAFAQNDEATALVDTTVVNTVNSIALPAFDYIASGDDDLLK-------- 2587
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
T+ +I + + ++V G +G+D + G N+ +GNDV DG
Sbjct: 2588 -----GTDGADNIDALADDDVVYAAAGDDTVSGGTGDDTLYGEGGNDTLTGGAGNDVIDG 2642
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+GL+T + + Y I + + + + D +++V+ L F+D+ + V +
Sbjct: 2643 GTGLNTVNFSSSYASYTIGEQGDTVSLSVSGPDGTDVVTNVDILHFSDKDVYVVGHGGYA 2702
Query: 361 IL 362
Sbjct: 2703 TF 2704
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 58/445 (13%), Positives = 112/445 (25%), Gaps = 20/445 (4%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG- 133
+ S T D++ G + ++ E+ +
Sbjct: 3018 FGGEGDDTLSGAAGSDTLFGGVGADTLDGGAGEDLFIVGTDYRSGSYYSGATEMTSTVDD 3077
Query: 134 -LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
L+ G Y+N + + + F S +A+
Sbjct: 3078 YLLDTLIGGAGTDTLQFQGTYDNQELVITAWDGTNETGTEGIERFVVLDRYATSTTLALD 3137
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFI-QTIYDSGGDDLLDLTLIG-----GVKNYIDLN 246
A + + + S G + L + G
Sbjct: 3138 LDLSALTDDGEDYSVTLADSLGTVTIDGAELVGSTGLNTLKGSAYSDIIRGGDGEDALYG 3197
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G E N I + ++G +G D G++ ++VF +G+D F G +G DT
Sbjct: 3198 QSGDDILYGEEGNDQIFGGEGDDLILGGTGVDAAYGDAGDDVFEGGAGDDFFSGGAGSDT 3257
Query: 307 FFYYAPS--YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
S L RF+ V D VE + S L
Sbjct: 3258 AIVATGSTVSLTGDARFDELASVVVTGSEGTDTYEGVETINVGGTVSVSGTAAAGDGLST 3317
Query: 365 T---ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
T + DL + + +G + S + + G
Sbjct: 3318 TITDGTAVDLTLAFRLIDSDGETLRGTYASLDG------ALGAAASGNTIAVADGETVSV 3371
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
++ + GV + A + D+ + + + + +G V
Sbjct: 3372 SSSTTLVSGVSIVGSGTDDAATFTGSLDIDVSGVTLEGVRFESISDNTTAITISADGATV 3431
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAA 506
+ D +A
Sbjct: 3432 N-NVSFTGNGTPDSAVAIEVTLVSA 3455
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 56/185 (30%), Gaps = 2/185 (1%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS--SIGGYEKNMTIAQHTV 267
T S D L L + + S I G N I+ T
Sbjct: 2872 STTLLTPNGDVTQIGSSNSDTLTAFLPSDTGYSLATVNDEVSGQIIDGLSGNDRISGSTY 2931
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ ++G +G D +IG S +++ + +D++ S+G ++ + +
Sbjct: 2932 TDKLIGGTGQDYLIGGSGDDILVGGADSDLYYVSTGDVVVELNVGGSSDEVRTDLGSYDL 2991
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ E + + + + L A + L +G D +
Sbjct: 2992 TEYVEILRYTGTGDFTGTGNAEDNLIFGGEGDDTLSGAAGSDTLFGGVGADTLDGGAGED 3051
Query: 388 EFGLS 392
F +
Sbjct: 3052 LFIVG 3056
Score = 54.4 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 64/191 (33%), Gaps = 4/191 (2%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+D +L N + + + G N TI ++++G+ GND + G +V
Sbjct: 2130 IDASLDTTGVNL--TGNDEDNELTGGSGNDTITGDIGEDTLIGNDGNDELDGGDEADVLE 2187
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+G+D G SG D + ++ D ++ +
Sbjct: 2188 GGTGDDTLIGGSGADQLDGGSGDDEFEYNAGAEVGSDTIIGGSGDDTVTIKAAGTYDFST 2247
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+++ + + +E A+ + IG + ++ G D+ D+ +
Sbjct: 2248 LNASSGIENLSIEGDAATSRVT--IGTKLVDAGTPLSITGDGISHDVEIDAGDLTSNQSI 2305
Query: 411 LRNVFGSDRGA 421
+ G +
Sbjct: 2306 ELDATGFEGDD 2316
Score = 44.4 bits (103), Expect = 0.057, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 30/76 (39%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+++ + + I + + G+ G+D +IG ++ F G+D+ G SG D
Sbjct: 6887 GSDADNVFLLGSGDDYIDGGAGDDYLRGADGSDYIIGGEGDDYLFGGDGDDLLYGGSGTD 6946
Query: 306 TFFYYAPSYLYKIYRF 321
+ + F
Sbjct: 6947 GSDFISGGDGLDTAVF 6962
>gi|83593942|ref|YP_427694.1| hypothetical protein Rru_A2610 [Rhodospirillum rubrum ATCC 11170]
gi|83576856|gb|ABC23407.1| hypothetical protein Rru_A2610 [Rhodospirillum rubrum ATCC 11170]
Length = 1313
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 483 FDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD+ YL +Y D+ +A H+ +G KE RNP + F A Y A + D++NA
Sbjct: 5 FDTTSYLTTYPDVARAVSLGQFASAKEHFDQYGAKELRNPTSWFDAAYYAAQNPDVLNAV 64
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSI-----TFNPDLYLTSYDDLWNVFGSDRS-AAAQHY 594
+ + + HF FG EGR+ TF+ +YL + D+ + +A HY
Sbjct: 65 SS--GVFPSVWAHFLAFGINEGRAPLEALATFDKAIYLAANTDVAAAVANGTMPSALFHY 122
Query: 595 ITHGMKEGRALGISGMQFKSVMNLSEKSRDK 625
+ GM EGR G + + + + S
Sbjct: 123 VAFGMDEGRPSGQTFILTTAQDPFTGTSGAD 153
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLR 496
AF Y+ ++ D+ A + K+HF +G +E R T FD+ Y D+
Sbjct: 4 AFDTTSYLTTYPDVARAV--SLGQFASAKEHFDQYGAKELRNPTSWFDAAYYAAQNPDVL 61
Query: 497 NVFGSDRGAAA-RHYITHGVKEGRNP----DAFKALEYIASHEDLINAFADAPDLVQAGK 551
N S + H++ G+ EGR P F Y+A++ D+ A A+ + +
Sbjct: 62 NAVSSGVFPSVWAHFLAFGINEGRAPLEALATFDKAIYLAANTDVAAAVAN--GTMPSAL 119
Query: 552 DHFSNFGYEEGR 563
H+ FG +EGR
Sbjct: 120 FHYVAFGMDEGR 131
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
AF Y+ ++ D+ A + + K+HF +G +E R+ T F+ Y D+
Sbjct: 4 AFDTTSYLTTYPDVARAVS--LGQFASAKEHFDQYGAKELRNPTSWFDAAYYAAQNPDVL 61
Query: 581 NVFGSDRSAAA-QHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLS 629
N S + H++ G+ EGRA + F + L+ + A ++
Sbjct: 62 NAVSSGVFPSVWAHFLAFGINEGRAPLEALATFDKAIYLAANTDVAAAVA 111
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDL 411
+++ + T + V + +HF ++G E R+ T FD+ Y D+
Sbjct: 1 MSLAFDTTSYLTTYPDVARAVSLGQFASAKEHFDQYGAKELRNPTSWFDAAYYAAQNPDV 60
Query: 412 RNVFGSD-RGAAARHYITHGVKEGRNP----DAFKALEYIASHEDLINAFADAPDLVQVG 466
N S + H++ G+ EGR P F Y+A++ D+ A A+ +
Sbjct: 61 LNAVSSGVFPSVWAHFLAFGINEGRAPLEALATFDKAIYLAANTDVAAAVANGT--MPSA 118
Query: 467 KDHFSNFGCEEGRFVT 482
H+ FG +EGR
Sbjct: 119 LFHYVAFGMDEGRPSG 134
>gi|73955228|ref|XP_546547.2| PREDICTED: similar to Neutrophil collagenase precursor (Matrix
metalloproteinase-8) (MMP-8) (PMNL collagenase)
(PMNL-CL) [Canis familiaris]
Length = 451
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 54/184 (29%), Gaps = 30/184 (16%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS-DIKF 81
W + Y+ T ++E N + + A WS V LTF + S DI+
Sbjct: 94 WKQTNLTYRIIKYTPQ-----LSEANV--ETAIQKAFQVWSNVSPLTFTKVSQGEVDIRI 146
Query: 82 IS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+N P +++FD + W L A HE+
Sbjct: 147 SFVQGDHGDNSPFDGPNGILAHAFQPGQGIGGDVHFDAEETWTENSSNYN-LFLVAAHEV 205
Query: 129 GHALGLMHPGS-----YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
GH+LGL H Y D Y + + +TP
Sbjct: 206 GHSLGLSHSTDPGALMYPNYVFHDPSTYTLPQDDINGIQTIYGPSSNPVQPTG---PSTP 262
Query: 184 MVSD 187
D
Sbjct: 263 TTCD 266
>gi|121728447|ref|ZP_01681473.1| RTX toxin RtxA [Vibrio cholerae V52]
gi|121629271|gb|EAX61706.1| RTX toxin RtxA [Vibrio cholerae V52]
Length = 4558
Score = 68.7 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 57/220 (25%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4181 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKSNI 4240
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4241 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4299
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ G D+
Sbjct: 4300 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVVK 4359
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 4360 -----LMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 4394
Score = 39.0 bits (89), Expect = 2.8, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 57/193 (29%), Gaps = 25/193 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNM--- 260
+ I ++ GDD + GG + + +++ + +
Sbjct: 4264 GNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSV 4323
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYA 311
TI + +E +GND N +GNDV +G G D A
Sbjct: 4324 TIGNNNQVE---LGAGNDFANIFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIATA 4380
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRSILEYTA 366
S + E ++ +DV+ + ID + + +
Sbjct: 4381 ISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGID 4440
Query: 367 SYEDLIQVIGQDV 379
+ + G D+
Sbjct: 4441 WQKLWFERSGYDL 4453
Score = 38.2 bits (87), Expect = 4.5, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 65/265 (24%), Gaps = 33/265 (12%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ Y A ++IVA+ G Y + T+Y G+D +
Sbjct: 26 FTGNYSADDGNNNIVAIGF--GGQIH-----AYGGDDHVTVGSIGATVYTGSGNDTVVGG 78
Query: 235 L------IGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSA 285
+ + N++ A I+ + G+ G+ G +A
Sbjct: 79 SAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHL-GNHGDVSYGGAAA 137
Query: 286 NNVFF--ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N SGN F G+ G + ++ + ++
Sbjct: 138 YNGITRKGLSGNVTFAGAGGYNALWHETNQGNLSFTGAGAGNKLDRTWSNRYQGSHGDVT 197
Query: 344 LRFADQCIDSVN--VKQRSILEYTASYEDLI------------QVIGQDVFESMKHFYEF 389
A + + L+ + + + +
Sbjct: 198 FDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTHQAEDVY 257
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNV 414
+ G Y Y D+ +
Sbjct: 258 TQTRGNIRFEGVGGYNSLYSDVAHG 282
Score = 37.8 bits (86), Expect = 5.2, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 38/164 (23%), Gaps = 11/164 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + N + +G G + ++ S SG DT
Sbjct: 21 SVEYFFTGNYSADDGNNNIVAIGFGG--QIHAYGGDDHVTVGSIGATVYTGSGNDTVV-- 76
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTA 366
S K+ +IV A + S + FA ID + A
Sbjct: 77 GGSAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAA 136
Query: 367 SYE--DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+Y + G F + E
Sbjct: 137 AYNGITRKGLSGNVTFAGAGGYNAL-WHETNQGNLSFTGAGAGN 179
>gi|291568485|dbj|BAI90757.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 1059
Score = 68.7 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 52/132 (39%), Gaps = 7/132 (5%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
PF + S GDDL+ + L + + + N T+ ++
Sbjct: 848 NNSITQPFPNQWFGSDGDDLIMGSDYDETL----LGFKGNDFLDARQGNNTLFGGQGNDT 903
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG SG D ++GN +++ F + D G G DT A ++ + I+Y
Sbjct: 904 LVGGSGRDALLGNKDDDILFGGNSGDTLYGGQGDDTLV--AGEGNSLLFGDKGNDILYGG 961
Query: 331 NEHKQDFLSDVE 342
+E D L+ E
Sbjct: 962 SE-GIDTLNGGE 972
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 39/137 (28%), Gaps = 18/137 (13%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I E+++G GND + NN F GND G SG D
Sbjct: 859 WFGSDGDDLIMGSDYDETLLGFKGNDFLDARQGNNTLFGGQGNDTLVGGSGRDALL--GN 916
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++ + +Y + L F D+ IL
Sbjct: 917 KDDDILFGGNSGDTLYGGQGDDTLVAGEGNSLLFGDK--------GNDILYG-------- 960
Query: 373 QVIGQDVFESMKHFYEF 389
G D + F
Sbjct: 961 GSEGIDTLNGGEGNDTF 977
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 5/115 (4%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+K T++ G+D L +GG L + + G T+
Sbjct: 880 FKGNDFLDARQGNNTLFGGQGNDTL----VGGSGRDALLGNKDDDILFGGNSGDTLYGGQ 935
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESS-GNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+++V GN ++ G+ N++ + S G D +G G DTF +
Sbjct: 936 GDDTLVAGEGNSLLFGDKGNDILYGGSEGIDTLNGGEGNDTFVMLPGEGYTVVAD 990
Score = 45.2 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 39/159 (24%), Gaps = 43/159 (27%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS G+D+++G+ + GND D G +T F
Sbjct: 861 GSDGDDLIMGSDYDETLLGFKGNDFLDARQGNNTLF----------------------GG 898
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D L R L + L D +
Sbjct: 899 QGNDTLVG---------------GSGRDALLGNKDDDILFGGNSGDTLYGGQGDDTLVAG 943
Query: 393 EGRDITFDSYL----YLGSY--DDLRNVFGSDRGAAARH 425
EG + F Y GS D L G+D
Sbjct: 944 EGNSLLFGDKGNDILYGGSEGIDTLNGGEGNDTFVMLPG 982
>gi|220926572|ref|YP_002501874.1| Hemolysin-type calcium-binding region [Methylobacterium nodulans
ORS 2060]
gi|219951179|gb|ACL61571.1| Hemolysin-type calcium-binding region [Methylobacterium nodulans
ORS 2060]
Length = 526
Score = 68.7 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/326 (14%), Positives = 88/326 (26%), Gaps = 24/326 (7%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D + ++ G N ++ G + + + + + V G GND + GN N+
Sbjct: 157 DADNNSVDGTSANDEVYGLAGNDTVRGLDGDDLLFGGSGDDFVHGGFGNDRLEGNKGNDG 216
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFA 347
F G D G G D + +Y +V+ + F + L
Sbjct: 217 LFGDPGRDALSGGEGQDALY--GGLDDDIVYGDAGDDLVFGQEGNDSGFGGVGNDFLSGG 274
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
D + ++L + + + I D+ G D F
Sbjct: 275 DGNDTLDGGEGNNLLFGDENDDRITAGIDNDLAYGGTGNDVIFGQTGNDALFGETGD--- 331
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
D + G D + T +EG N + + ++ + G
Sbjct: 332 -DFIGAGSGDDFLSGGDGNDTLFGEEGNNLLFGD-----ENDDRILAGTGNDLAYGGTGN 385
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
D + F D G+ G+ D L
Sbjct: 386 DVIFGQTGNDVLFGETGDDFIGAGAGDDLLSGGA------------GIDSLFGEDGNDLL 433
Query: 528 EYIASHEDLINAFADAPDLVQAGKDH 553
+ ++L+ V G H
Sbjct: 434 FGNSGDDELVGGAGADTFFVGLGDGH 459
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/307 (14%), Positives = 73/307 (23%), Gaps = 22/307 (7%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
S + G N ++ + + V G +GND V G +++ F SG+D G G D
Sbjct: 147 RPSLESVVSGDADNNSVDGTSANDEVYGLAGNDTVRGLDGDDLLFGGSGDDFVHGGFGND 206
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
++ + +D LS E I+
Sbjct: 207 RL--EGNKGNDGLF-----------GDPGRDALSGGE------GQDALYGGLDDDIVYGD 247
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A + + G D +G D + D + +
Sbjct: 248 AGDDLVFGQEGNDSGFGGVGNDFLSGGDGNDTLDGGEGNNLLFGDENDDRITAGIDNDLA 307
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
Y G AL + + D G D F +
Sbjct: 308 YGGTGNDVIFGQTGNDALFGETGDDFIGAGSGDDFLSGGDGNDTLFGEEGNNLLFGDEND 367
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
L + G+ + G + A + L
Sbjct: 368 DRILAGTGNDLAYGGTGNDVI---FGQTGNDVLFGETGDDFIGAGAGDDLLSGGAGIDSL 424
Query: 546 LVQAGKD 552
+ G D
Sbjct: 425 FGEDGND 431
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 78/253 (30%), Gaps = 10/253 (3%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D + D G+ + + G G + G D +
Sbjct: 219 GDPGRDALSGGEGQDALYGGLDDDIVYGDAGDDLVFGQEGNDSGFGGVGNDFLSGGDGND 278
Query: 154 ENDSFLTSVMSYFMPQDS--MMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK--- 208
D + + + D +D++ Q A G G++
Sbjct: 279 TLDGGEGNNLLFGDENDDRITAGIDNDLAYGGTGNDVIFGQTGNDALFGETGDDFIGAGS 338
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ T++ G++LL D ++ G N + I G N +
Sbjct: 339 GDDFLSGGDGNDTLFGEEGNNLLFGDENDDRILAGTGNDLAYGGTGNDVIFGQTGNDVLF 398
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T + + +G+D++ G + + F GND+ G+SG D A + + + +
Sbjct: 399 GETGDDFIGAGAGDDLLSGGAGIDSLFGEDGNDLLFGNSGDDELVGGAGADTFFVGLGDG 458
Query: 324 AIIVYDANEHKQD 336
++ D D
Sbjct: 459 HELIRDFAASGPD 471
>gi|329851818|ref|ZP_08266499.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
gi|328839667|gb|EGF89240.1| rhizobiocin RzcA [Asticcacaulis biprosthecum C19]
Length = 593
Score = 68.7 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 49/346 (14%), Positives = 96/346 (27%), Gaps = 14/346 (4%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T W+ + G + +A + + + G+ GND + G N+ +G DV G G D
Sbjct: 209 TSQWAPLIGDDDGNLLAGDSSADLINGNGGNDTLTGAGNNDTIDGGTGYDVMTGGLGDDV 268
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
++ L FE +Y + + + ++ ++L +
Sbjct: 269 YYVDHVYDLVNELHFEGTDTLYSSVTYSLFGRAVENAYLTGAANLNITGNSLANVLTGNS 328
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ G D + ++ D+ ++ +
Sbjct: 329 GNNRIDGAQGADTMSGGAGDDLYTVNAAGDVIIEATNEGLDIVHASVNYTLSDNLEDLTL 388
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+T G +G L + L A + VG+D + ++ +
Sbjct: 389 LTAGNLKGTGNAGNNVLYGNPGNNKLDGAAGNDVLDGSVGQDTLIGGLGNDTYYIHDTAA 448
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHG-VKEGRNPDAFK--ALEYIASHEDLINAFADA 543
+ G+D + Y HG E + + LI
Sbjct: 449 KVTEVNGE-----GTDIIYSDVSYNLHGRYIETLELTGIDNIDATGNSVNNILIGNANSN 503
Query: 544 PDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSA 589
GKD G F L + D F + +
Sbjct: 504 TLNGLGGKD--ILTGGLGADIFLF----QLGAAKDTITDFSASDND 543
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 43/305 (14%), Positives = 82/305 (26%), Gaps = 30/305 (9%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ N +S AD G G + A I A
Sbjct: 308 TGAANLNITGNSLANVLTGNSGNNRIDGAQGADTMSGGAGDDLYTVNAAGDVIIEA---- 363
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G V+ N +D+ + +A +Y
Sbjct: 364 ---TNEGLDIVHASVNYTLSDNLEDLTLLTAGNLKGTGNAGNNV--------------LY 406
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G P + + S T+ G+D + ++ +
Sbjct: 407 GNPGNNKLDGAAG-NDVLDGSVGQDTLIGGLGNDTYYIHDTAAKVTEVN-GEGTDIIYSD 464
Query: 256 YEKNMTIAQ-----HTVIES--VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
N+ T I++ G+S N+++IGN+ +N G D+ G G D F
Sbjct: 465 VSYNLHGRYIETLELTGIDNIDATGNSVNNILIGNANSNTLNGLGGKDILTGGLGADIFL 524
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + I F + +++ + A + I A+
Sbjct: 525 FQLGAAKDTITDFSASDNDMININGFTGGVANTGLVTQAGLNVLITLNSGNIITINNATT 584
Query: 369 EDLIQ 373
D++
Sbjct: 585 ADVLS 589
>gi|321461202|gb|EFX72236.1| hypothetical protein DAPPUDRAFT_326457 [Daphnia pulex]
Length = 634
Score = 68.7 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 25/162 (15%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W+ I Y + + T + A WS L F + + +DI
Sbjct: 219 WNKRRITYFLANWSPKIGDEETT------IQQLERAFKVWSDYAHLKFVQVPTPDADITI 272
Query: 82 ISS---------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL--SHNA 124
+ + P + +++FD+ + W +G+ + A
Sbjct: 273 LFGRGYHGDRYPFDGVGYTLAHAYYPYEFDNFGGDVHFDEDEPWAVNPDEGSGIDFFTVA 332
Query: 125 LHEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
HE+GH+LGL H P + +P Y + + Y
Sbjct: 333 THELGHSLGLAHSPVPGSVMFPYYKGSQPNLQLDYDDILAMY 374
>gi|109108464|ref|XP_001098302.1| PREDICTED: interstitial collagenase isoform 2 [Macaca mulatta]
Length = 469
Score = 68.7 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 52/185 (28%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T + A WS V LTF + S +DI
Sbjct: 108 RWEQTHLTYRIENYTPDLP-------RAAVDQAIEKAFQLWSNVTPLTFTKVSEGQADIM 160
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 161 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLYRVAA 217
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE GH+LGL H + D D Y Q+ + T
Sbjct: 218 HEFGHSLGLAHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGGSQNPVQPTG---PQT 274
Query: 183 PMVSD 187
P V D
Sbjct: 275 PKVCD 279
>gi|299065746|emb|CBJ36922.1| putative metalloprotease, Hemolysin-type calcium-binding region
(rtxA) [Ralstonia solanacearum CMR15]
Length = 2428
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 53/344 (15%), Positives = 98/344 (28%), Gaps = 19/344 (5%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
D +TI+ G+DL+ + NYID + S + + TI T ++
Sbjct: 467 NPDGGGSETIFGGSGNDLIITSN---GNNYIDAGSG-NSLVCAGAGDDTIFAGTGNSTIT 522
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G+D + G S N++ +GN+ G SG DT + + ++ +A
Sbjct: 523 GGGGDDYIDGESGNHLMAGGAGNNTIFGGSGNDTIY--------AGVAYGSSTGDINAGN 574
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ D S + + + + L + G D+
Sbjct: 575 NYVDAGSGNSIVFGSAGNDTLMAGSGQDTLVAGNGNTTIYGGTGVDLIYGGSGNDLIYAG 634
Query: 393 EGRDITFDSYLYLGS-YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+G + + GS + G D V +G + + + +
Sbjct: 635 DGGTAGVVTTVVAGSGNTTIYGGLGVDVIYGGAGSDVIYVGDGGSAAQRSVVYAGSGNTT 694
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
+ G D T L G D A+
Sbjct: 695 VYGGLGADEIHGGSGNDVLYAGDGGSTDAPT--VVYAGTGNSTLYGGAGVDILNASA--- 749
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G + L A + L+ + AG + +
Sbjct: 750 -AGSTLLVGGSGNETLLGGAGDDTLVAGTGNDSMDGGAGSNTYI 792
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/375 (13%), Positives = 105/375 (28%), Gaps = 27/375 (7%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ N + + +Y G+D +DL G N I+L S
Sbjct: 1890 GSDTFVLNAVAGSRDVAELGDGSNVVYGQDGNDEVDL---GAGDNIINLGNGSNYIGSTR 1946
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N ++ G + V +NV +G D +G +T + S
Sbjct: 1947 SSN----AGNGNNAIYLGDGQNTVWLGDGDNVLGVGTGLDQIHVGNGNNTLYAGHGSSND 2002
Query: 317 KIYRFENAIIVYDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
I + V + + + ++ + + + +
Sbjct: 2003 TIQGGDGDNTVTVGDGANTVTVGNGKNKIWGGNGNNQVNVGDGNDTIGLGSGNNIVKTGN 2062
Query: 376 GQDVFESMKHFYEFGLSEG-------------RDITFDSYLYLGSYDDLRNVFGSDRGAA 422
G + GL +G R D+ Y+G+ D+ G +
Sbjct: 2063 GASSVSVGDGMNQIGLGDGANTVSAGAGTNVIRGGNGDNAAYVGNGDNDVEFGGGNNTVG 2122
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ V G + A S+ + A+ + + G +
Sbjct: 2123 LGT-GNNTVLLGGGANTVYAGYGTGSNSISVGNGANTVTVADGANYINAGNGTDHVYGGN 2181
Query: 483 FDSYLYLGSYDDLRNVFGSDRG-----AAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
D+ ++LG+ D N+ + Y+ +G + R + + L
Sbjct: 2182 GDNTIWLGNGVDTVNLGDGANSIHIWDGDSAVYVGNGSNQIRLGLGNDVVSAGNGNNTLT 2241
Query: 538 NAFADAPDLVQAGKD 552
++ + AG +
Sbjct: 2242 TGDGNSNIWMGAGNN 2256
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/345 (12%), Positives = 97/345 (28%), Gaps = 9/345 (2%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ V N + +G TI + + + G
Sbjct: 1960 GDGQNTVWLGDGDNVLGVGTGLDQIHVGNGNNTLYAGHGSSNDTIQGGDGDNTVTVGDGA 2019
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
NG ++G + + + + + ++++ G + + + +
Sbjct: 2020 NTVTVGNGKNKIWGGNGNNQVNVGDGNDTIGLGSGNNIVKTGNGASSVSVGDGMNQIGLG 2079
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI- 253
GA S G V + + +G +D GG N + L T + + +
Sbjct: 2080 DGANTVSAG---AGTNVIRGGNGDNAAYVGNGDND----VEFGGGNNTVGLGTGNNTVLL 2132
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
GG + T S+ +G + V N +G D G +G +T +
Sbjct: 2133 GGGANTVYAGYGTGSNSISVGNGANTVTVADGANYINAGNGTDHVYGGNGDNTIWLGNGV 2192
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ N+I ++D + + ++R + L ++
Sbjct: 2193 DTVNLGDGANSIHIWDGDSAVY-VGNGSNQIRLGLGNDVVSAGNGNNTLTTGDGNSNIWM 2251
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
G + + G+ T G+ +D
Sbjct: 2252 GAGNNQIQVGNGNNTIGIGGVAGSTNTIQAGDGNNTIAVAAGTND 2296
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 52/454 (11%), Positives = 107/454 (23%), Gaps = 45/454 (9%)
Query: 203 GNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ +Y ++ G D + + G N I + S G N
Sbjct: 224 DDTLYGSSGNDLINAGGGNNQVWGGEGADTI---IAGDGGNLIHDGDGNNSITVGNGAN- 279
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I +++ +G+D V NN + G DV +G + F L
Sbjct: 280 QIFLGNGANTLITGTGSDYVTVGDGNNQIEGNGGRDVIVAGNGDNAIFANKKIDLASAIA 339
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+++ + V+ ++ + ++ G D
Sbjct: 340 NRDSLSAAGLQGD---------LIAVGSGNNTIVSGTGNDLVVLGGGNDVVVLGPGNDTV 390
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY-ITHGVKEGRNPDA 439
+ + + + + A HY G +
Sbjct: 391 VGGEVASQVY------PAWSAPSVMTDAATGGQPSAGHFVDAVTHYQGLTTTSSGGYVPS 444
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
+A + DA G G +T + Y+ + V
Sbjct: 445 ADLSALLAQYPSTQQYNVDAYGNPDGGGSETIFGGSGNDLIITSNGNNYIDAGSGNSLVC 504
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
+ G ++ + + + + +G D
Sbjct: 505 AGAGDDTI--FAGTGNSTITGGGGDDYIDGESGNHLMAGGAGNNTIFGGSGND------- 555
Query: 560 EEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLS 619
T Y + + A +Y+ G G +G +
Sbjct: 556 --------------TIYAGVAYGSSTGDINAGNNYVDAGSGNSIVFGSAGNDTLMAGSGQ 601
Query: 620 EKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSD 653
+ + + VDL G+ Y D
Sbjct: 602 DTLVAGNGNTTIYGGTGVDLIYGGSGNDLIYAGD 635
>gi|16265074|ref|NP_437866.1| putative protease protein [Sinorhizobium meliloti 1021]
gi|15141213|emb|CAC49726.1| putative protease [Sinorhizobium meliloti 1021]
Length = 213
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 53/142 (37%), Gaps = 35/142 (24%)
Query: 184 MVSDIVAVQKIYGAP-KGSLGNNIYKIEVQQKDS-------------PFIQTIYDSGGDD 229
M+ DI A+Q++YGA + GN +YK + P ++ +D GG D
Sbjct: 1 MMGDIAALQEMYGADFTTNSGNTVYKGTPGSGATFVNGAGRNLAGRQPQLRHHWDGGGKD 60
Query: 230 LLDLTLIGGVKNYIDLNTESWSSI---------GGYEKNMTIAQ-----------HTVIE 269
DLT +DL S+ GG ++IE
Sbjct: 61 TYDLTAYTTALK-VDLRPGKASTFSIDQLAWLDGGPNGGFAAGNIFNALLYRGDTRSLIE 119
Query: 270 SVVGSSGNDVVIGNSANNVFFE 291
+V G S D + GN A NV +
Sbjct: 120 NVKGGSAGDAITGNQAANVLWG 141
>gi|121588038|ref|ZP_01677789.1| RTX toxin RtxA [Vibrio cholerae 2740-80]
gi|121547733|gb|EAX57825.1| RTX toxin RtxA [Vibrio cholerae 2740-80]
Length = 4545
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 57/220 (25%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4168 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKSNI 4227
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4228 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4286
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ G D+
Sbjct: 4287 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVVK 4346
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 4347 -----LMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 4381
Score = 39.0 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 57/193 (29%), Gaps = 25/193 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNM--- 260
+ I ++ GDD + GG + + +++ + +
Sbjct: 4251 GNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSV 4310
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYA 311
TI + +E +GND N +GNDV +G G D A
Sbjct: 4311 TIGNNNQVE---LGAGNDFANIFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIATA 4367
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRSILEYTA 366
S + E ++ +DV+ + ID + + +
Sbjct: 4368 ISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGID 4427
Query: 367 SYEDLIQVIGQDV 379
+ + G D+
Sbjct: 4428 WQKLWFERSGYDL 4440
Score = 38.2 bits (87), Expect = 4.8, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 65/265 (24%), Gaps = 33/265 (12%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ Y A ++IVA+ G Y + T+Y G+D +
Sbjct: 13 FTGNYSADDGNNNIVAIGF--GGQIH-----AYGGDDHVTVGSIGATVYTGSGNDTVVGG 65
Query: 235 L------IGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSA 285
+ + N++ A I+ + G+ G+ G +A
Sbjct: 66 SAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHL-GNHGDVSYGGAAA 124
Query: 286 NNVFF--ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N SGN F G+ G + ++ + ++
Sbjct: 125 YNGITRKGLSGNVTFAGAGGYNALWHETNQGNLSFTGAGAGNKLDRTWSNRYQGSHGDVT 184
Query: 344 LRFADQCIDSVN--VKQRSILEYTASYEDLI------------QVIGQDVFESMKHFYEF 389
A + + L+ + + + +
Sbjct: 185 FDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTHQAEDVY 244
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNV 414
+ G Y Y D+ +
Sbjct: 245 TQTRGNIRFEGVGGYNSLYSDVAHG 269
Score = 37.8 bits (86), Expect = 5.3, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 38/164 (23%), Gaps = 11/164 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + N + +G G + ++ S SG DT
Sbjct: 8 SVEYFFTGNYSADDGNNNIVAIGFGG--QIHAYGGDDHVTVGSIGATVYTGSGNDTVV-- 63
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTA 366
S K+ +IV A + S + FA ID + A
Sbjct: 64 GGSAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAA 123
Query: 367 SYE--DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+Y + G F + E
Sbjct: 124 AYNGITRKGLSGNVTFAGAGGYNAL-WHETNQGNLSFTGAGAGN 166
>gi|4455065|gb|AAD21057.1| RtxA protein [Vibrio cholerae]
Length = 4545
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 57/220 (25%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4168 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKSNI 4227
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4228 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4286
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ G D+
Sbjct: 4287 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVVK 4346
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 4347 -----LMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 4381
Score = 39.0 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 56/192 (29%), Gaps = 25/192 (13%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNM--- 260
+ I ++ GDD + GG + + +++ + +
Sbjct: 4251 GNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSV 4310
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYA 311
TI + +E +GND N +GNDV +G G D A
Sbjct: 4311 TIGNNNQVE---LGAGNDFANIFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIATA 4367
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRSILEYTA 366
S + E ++ +DV+ + ID + + +
Sbjct: 4368 ISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGID 4427
Query: 367 SYEDLIQVIGQD 378
+ + G D
Sbjct: 4428 WQKLWFERSGYD 4439
Score = 38.2 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 65/265 (24%), Gaps = 33/265 (12%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ Y A ++IVA+ G Y + T+Y G+D +
Sbjct: 13 FTGNYSADDGNNNIVAIGF--GGQIH-----AYGGDDHVTVGSIGATVYTGSGNDTVVGG 65
Query: 235 L------IGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSA 285
+ + N++ A I+ + G+ G+ G +A
Sbjct: 66 SAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHL-GNHGDVSYGGAAA 124
Query: 286 NNVFF--ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N SGN F G+ G + ++ + ++
Sbjct: 125 YNGITRKGLSGNVTFAGAGGYNALWHETNQGNLSFTGAGAGNKLDRTWSNRYQGSHGDVT 184
Query: 344 LRFADQCIDSVN--VKQRSILEYTASYEDLI------------QVIGQDVFESMKHFYEF 389
A + + L+ + + + +
Sbjct: 185 FDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTHQAEDVY 244
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNV 414
+ G Y Y D+ +
Sbjct: 245 TQTRGNIRFEGVGGYNSLYSDVAHG 269
Score = 37.8 bits (86), Expect = 5.3, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 38/164 (23%), Gaps = 11/164 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + N + +G G + ++ S SG DT
Sbjct: 8 SVEYFFTGNYSADDGNNNIVAIGFGG--QIHAYGGDDHVTVGSIGATVYTGSGNDTVV-- 63
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTA 366
S K+ +IV A + S + FA ID + A
Sbjct: 64 GGSAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAA 123
Query: 367 SYE--DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+Y + G F + E
Sbjct: 124 AYNGITRKGLSGNVTFAGAGGYNAL-WHETNQGNLSFTGAGAGN 166
>gi|153817921|ref|ZP_01970588.1| RTX toxin RtxA [Vibrio cholerae NCTC 8457]
gi|126511548|gb|EAZ74142.1| RTX toxin RtxA [Vibrio cholerae NCTC 8457]
Length = 4545
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 57/220 (25%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4168 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKSNI 4227
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4228 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4286
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ G D+
Sbjct: 4287 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVVK 4346
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 4347 -----LMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 4381
Score = 39.0 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 57/193 (29%), Gaps = 25/193 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNM--- 260
+ I ++ GDD + GG + + +++ + +
Sbjct: 4251 GNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSV 4310
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYA 311
TI + +E +GND N +GNDV +G G D A
Sbjct: 4311 TIGNNNQVE---LGAGNDFANIFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIATA 4367
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRSILEYTA 366
S + E ++ +DV+ + ID + + +
Sbjct: 4368 ISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGID 4427
Query: 367 SYEDLIQVIGQDV 379
+ + G D+
Sbjct: 4428 WQKLWFERSGYDL 4440
Score = 38.2 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 65/265 (24%), Gaps = 33/265 (12%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ Y A ++IVA+ G Y + T+Y G+D +
Sbjct: 13 FTGNYSADDGNNNIVAIGF--GGQIH-----AYGGDDHVTVGSIGATVYTGSGNDTVVGG 65
Query: 235 L------IGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSA 285
+ + N++ A I+ + G+ G+ G +A
Sbjct: 66 SAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHL-GNHGDVSYGGAAA 124
Query: 286 NNVFF--ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N SGN F G+ G + ++ + ++
Sbjct: 125 YNGITRKGLSGNVTFAGAGGYNALWHETNQGNLSFTGAGAGNKLDRTWSNRYQGSHGDVT 184
Query: 344 LRFADQCIDSVN--VKQRSILEYTASYEDLI------------QVIGQDVFESMKHFYEF 389
A + + L+ + + + +
Sbjct: 185 FDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTHQAEDVY 244
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNV 414
+ G Y Y D+ +
Sbjct: 245 TQTRGNIRFEGVGGYNSLYSDVAHG 269
Score = 37.8 bits (86), Expect = 5.4, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 38/164 (23%), Gaps = 11/164 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + N + +G G + ++ S SG DT
Sbjct: 8 SVEYFFTGNYSADDGNNNIVAIGFGG--QIHAYGGDDHVTVGSIGATVYTGSGNDTVV-- 63
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTA 366
S K+ +IV A + S + FA ID + A
Sbjct: 64 GGSAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAA 123
Query: 367 SYE--DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+Y + G F + E
Sbjct: 124 AYNGITRKGLSGNVTFAGAGGYNAL-WHETNQGNLSFTGAGAGN 166
>gi|56681784|gb|AAW21428.1| leukotoxin A [Pasteurellaceae bacterium I17]
Length = 390
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 73/228 (32%), Gaps = 22/228 (9%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
G G + + EI G G Y +D E + +V +
Sbjct: 112 NLGAGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEKGSYTVN--RFVET 169
Query: 171 SMMDASFGYCATPMVSDIVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
T +V + ++ +G K +G Y + K ++ I + +D
Sbjct: 170 GKALHEVTSTHTALVGNREEKIEYRHGNNKQHVG---YYTKDTLKA---VEEIIGTSHND 223
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + + G + TI + + + G G+D++ G + ++
Sbjct: 224 IFKGSKF-------------DDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFI 270
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
GND+ G G D F + I E + ++ + +D
Sbjct: 271 DGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDL 318
Score = 44.8 bits (104), Expect = 0.049, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 47/211 (22%), Gaps = 39/211 (18%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYA 311
+G+D V S G D S G + F
Sbjct: 111 ANLGAGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEKGSYTVNRFVETG 170
Query: 312 ------PSYLYKIYRFENAIIVYDANEHKQ-------DFLSDVERLRFADQCIDSVNVKQ 358
S + I Y +KQ D L VE + K
Sbjct: 171 KALHEVTSTHTALVGNREEKIEYRHGNNKQHVGYYTKDTLKAVEEIIGTSHNDIFKGSKF 230
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ + G D K G D ++ G +DL + D
Sbjct: 231 DDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKGD 285
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASH 449
H G + L + S+
Sbjct: 286 DI--FVHRQGDGNDSITESEGNDKLSFSDSN 314
>gi|73621356|sp|Q9RCG8|PAXA_PASAE RecName: Full=Exotoxin paxA
gi|6531347|gb|AAF15370.1|U66588_2 PaxA [Pasteurella aerogenes]
Length = 1049
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 41/126 (32%), Gaps = 18/126 (14%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G+D++ GN +++ + GND G +G D + K++ + +
Sbjct: 754 GADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLY--GGEGNDKLFGGNGNNYL--SGG 809
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D L V ++L + L G D + +
Sbjct: 810 DGDDELQ--------------VLGNGFNVLRGGKGNDKLYGGAGSDFLDGGEGDDYLAGG 855
Query: 393 EGRDIT 398
EG D
Sbjct: 856 EGNDFY 861
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 49/195 (25%), Gaps = 39/195 (20%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
K + ++ + G + D I + + G + + +
Sbjct: 717 SGNSNLKAKDNLYSVEEIIGSNHRDEFKGSKF-RDIFHGADGDDLLNGNDGDDILYGDKG 775
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G +GND + G N+ F +GN+ G G D
Sbjct: 776 NDELRGDNGNDQLYGGEGNDKLFGGNGNNYLSGGDGDD---------------------- 813
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
E + K L A + L G D +
Sbjct: 814 --------------ELQVLGNGFNVLRGGKGNDKLYGGAGSDFLDGGEGDDYLAGGEGND 859
Query: 388 --EFGLSEGRDITFD 400
+ + G +D
Sbjct: 860 FYVYRSTSGNHTIYD 874
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 14/124 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + +Y G+D L G N E + G N ++
Sbjct: 757 GDDLLNGNDGDDILYGDKGNDEL----RGDNGNDQLYGGEGNDKLFGGNGNNYLSGGDGD 812
Query: 269 ESV----------VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + G GND + G + ++ G+D G G D + Y + S + I
Sbjct: 813 DELQVLGNGFNVLRGGKGNDKLYGGAGSDFLDGGEGDDYLAGGEGNDFYVYRSTSGNHTI 872
Query: 319 YRFE 322
Y
Sbjct: 873 YDQG 876
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/131 (12%), Positives = 34/131 (25%), Gaps = 9/131 (6%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+L + L G D + EG D F G+ ++ +
Sbjct: 753 HGADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGNDKLFG-----GNGNNYLS 807
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
D + ++ G+ Y + D ++ L + F +
Sbjct: 808 GGDGDDELQVLGNGFNVLRGGKG----NDKLYGGAGSDFLDGGEGDDYLAGGEGNDFYVY 863
Query: 474 GCEEGRFVTFD 484
G +D
Sbjct: 864 RSTSGNHTIYD 874
Score = 37.1 bits (84), Expect = 9.5, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 62/287 (21%), Gaps = 71/287 (24%)
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYL----YKIYRFENAIIVYDANEHKQDFLSD 340
N+ F +SG+ G D +Y + +
Sbjct: 631 GNDKVFLASGSAEIHAGDGHDVVYYDKTDTGLLMVDGTQATKQGDYTVTRELSGATQILR 690
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK------------HFYE 388
+ + + S E ++ + G ++ H E
Sbjct: 691 --------EVVKNQKSSVGSRQETVEYRDNELAQSGNSNLKAKDNLYSVEEIIGSNHRDE 742
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
F S+ RDI + DDL N D Y G E R + L
Sbjct: 743 FKGSKFRDI-----FHGADGDDLLNGNDGDDIL----YGDKGNDELRGDNGNDQLYGGEG 793
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
++ L + G D G
Sbjct: 794 NDKLFGGNGNNYLSGGDGDDELQVLG---------------------------------- 819
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+G R L A + L D G D +
Sbjct: 820 ----NGFNVLRGGKGNDKLYGGAGSDFLDGGEGDDYLAGGEGNDFYV 862
>gi|199652449|gb|ACH91676.1| matrix metallopeptidase 1 [Sus scrofa]
Length = 469
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 57/185 (30%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W N + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 108 RWENTHLTYRIENYTPDLSREDVD-------RAIEKAFQLWSNVSPLTFTKVSEGQADIM 160
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 161 ISFVRGDNRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTKNF-RDYNLYRVAA 217
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H +Y D D Y ++ + + T
Sbjct: 218 HELGHSLGLSHSTDIGALMYPNYIYTGDVQLSQDDIDGIQAIYGPSENPVQPSG---PQT 274
Query: 183 PMVSD 187
P V D
Sbjct: 275 PQVCD 279
>gi|158422624|ref|YP_001523916.1| hypothetical protein AZC_1000 [Azorhizobium caulinodans ORS 571]
gi|158329513|dbj|BAF86998.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 379
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/252 (15%), Positives = 72/252 (28%), Gaps = 4/252 (1%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
I L + G + + + G+ GND +IG N+V +G D+
Sbjct: 18 GSKNILLGLGGDDVLHGQNLADHLEGARGDDWLYGAGGNDTLIGGEGNDVLNGGAGADLL 77
Query: 299 DGSSGLDTFFYYAPSYLYKIYRF-ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G +G+DT Y A ++ + + E + D +E + +
Sbjct: 78 IGGTGIDTVDYSASGGAAQVGVTVDLSAGEGSGGEAEGDLYFGIENIIGTSAADTLLGNA 137
Query: 358 QRSILEYTASY---EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
++++ AS + ++ G D + +G D + GS V
Sbjct: 138 GANVIDAGASAIAGDVILAGGGDDTVLIGANAATADGGDGFDRLVLNLGTEGSTTGATFV 197
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
F S + + A + A + L G D
Sbjct: 198 FDSGATSLGATFTNFETVTVTGTAATDTVFGGAGDDVLDGGAGRDYLRGGAGGDVLIGGV 257
Query: 475 CEEGRFVTFDSY 486
+
Sbjct: 258 GHDSLRGGDGDD 269
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/248 (15%), Positives = 62/248 (25%), Gaps = 34/248 (13%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G +G + + G D +D + GG S G
Sbjct: 54 GGNDTLIGG---EGNDVLNGGAGADLLIGGTGIDTVDYSASGGAAQVGVTVDLSAGEGSG 110
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS---GNDVFDGSSGLDTFFYYAP 312
E + IE+++G+S D ++GN+ NV + DV G DT A
Sbjct: 111 GEAEGDLYFG--IENIIGTSAADTLLGNAGANVIDAGASAIAGDVILAGGGDDTVLIGAN 168
Query: 313 SYLYKIYRFENAIIVYDANEHKQD---------------FLSDVER-----------LRF 346
+ + +++ E ++ E +
Sbjct: 169 AATADGGDGFDRLVLNLGTEGSTTGATFVFDSGATSLGATFTNFETVTVTGTAATDTVFG 228
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
R L A + LI +G D G D
Sbjct: 229 GAGDDVLDGGAGRDYLRGGAGGDVLIGGVGHDSLRGGDGDDRLEGGWGNDFLVGGKGSDT 288
Query: 407 SYDDLRNV 414
D N
Sbjct: 289 FVYDDLNS 296
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 60/242 (24%), Gaps = 15/242 (6%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT--ILSHNALHEIGHALGLMHPGSYN 141
G T + AD+ G G T + ++G + L
Sbjct: 51 YGAGGNDTLIGGEGNDVLNGGAGADLLIGGTGIDTVDYSASGGAAQVGVTVDLSAGEGSG 110
Query: 142 GGYPV-YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G + + + + + + +++ + GA
Sbjct: 111 GEAEGDLYFGIENIIGTSAADTLLGNAGANVIDAGASAIAGDVILAGGGDDTVLIGANAA 170
Query: 201 SLGN---------NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID---LNTE 248
+ N+ + + S G + +
Sbjct: 171 TADGGDGFDRLVLNLGTEGSTTGATFVFDSGATSLGATFTNFETVTVTGTAATDTVFGGA 230
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G + + ++G G+D + G ++ GND G G DTF
Sbjct: 231 GDDVLDGGAGRDYLRGGAGGDVLIGGVGHDSLRGGDGDDRLEGGWGNDFLVGGKGSDTFV 290
Query: 309 YY 310
Y
Sbjct: 291 YD 292
Score = 44.8 bits (104), Expect = 0.051, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 60/247 (24%), Gaps = 62/247 (25%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT- 266
+ + + GDD L G N + E + G + T
Sbjct: 27 GGDDVLHGQNLADHLEGARGDDWL----YGAGGNDTLIGGEGNDVLNGGAGADLLIGGTG 82
Query: 267 -------------------------------------VIESVVGSSGNDVVIGNSANNVF 289
IE+++G+S D ++GN+ NV
Sbjct: 83 IDTVDYSASGGAAQVGVTVDLSAGEGSGGEAEGDLYFGIENIIGTSAADTLLGNAGANVI 142
Query: 290 FESS---GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD---------- 336
+ DV G DT A + + +++ E
Sbjct: 143 DAGASAIAGDVILAGGGDDTVLIGANAATADGGDGFDRLVLNLGTEGSTTGATFVFDSGA 202
Query: 337 -----FLSDVERLRFADQCIDSV--NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
++ E + +L+ A + L G DV
Sbjct: 203 TSLGATFTNFETVTVTGTAATDTVFGGAGDDVLDGGAGRDYLRGGAGGDVLIGGVGHDSL 262
Query: 390 GLSEGRD 396
+G D
Sbjct: 263 RGGDGDD 269
>gi|148227776|ref|NP_001080518.1| matrix metalloproteinase 1 [Xenopus laevis]
gi|32450369|gb|AAH54233.1| Mmp1-prov protein [Xenopus laevis]
Length = 466
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 62/219 (28%), Gaps = 53/219 (24%)
Query: 33 DVLTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFEETSIH-SDIKFIS--- 83
V L++ I P+ + A WS V LTF + +DI+
Sbjct: 106 PVWNKKDLTYRIQNYTPDMTRDEVDRAIQKAFKVWSDVTPLTFTRVNDGVADIEISFAAR 165
Query: 84 ------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ P ++ + +FD+ + W G G L A HE GH+
Sbjct: 166 DHKDFYPFDGPYGTLAHAFAPGNNNG--GDAHFDEDEDWTSG-SVGFNLFLVAAHEFGHS 222
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--SDIV 189
LGL H N + + T + D+
Sbjct: 223 LGLYHSNDPNALM---------------------------YPNYHYVNPNTYQLPQDDLN 255
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
+Q +YGA + + I G+
Sbjct: 256 GIQSLYGARTKPAEPSTPSNPTNCPPNITFDAITTLRGE 294
>gi|283558389|gb|ACM17707.2| RTX toxin RtxA [Vibrio vulnificus]
Length = 4595
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 58/220 (26%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+L+ +++ G + A + G G+DV +N+
Sbjct: 4218 DFLRNSGHLQGDGDINLSLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI 4277
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4278 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4336
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ S G D+
Sbjct: 4337 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNYNRINASAGNDVVK 4396
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N + A G
Sbjct: 4397 -----LMGYHAVLNGGEGEDHLIAAAISKFSQFNGGEGRD 4431
>gi|221125872|ref|XP_002165203.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 306
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 52/149 (34%), Gaps = 19/149 (12%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
W+ + Y D++ + ++ R A WS V L F ETS DI
Sbjct: 90 WTKTTLTYSF-----RNKCEDLS--DGAVRQTIREAFKVWSDVTHLAFTETSGKGDITIG 142
Query: 83 SSNNGYVCTPRYDS-------RYFMEIN---FDKADVWRYGIGKGTILSHNALHEIGHAL 132
+N + +D YF FD+ + W GT L A+HEIGH L
Sbjct: 143 FHHNSHGDNSPFDGPGRVLAHAYFPPEGRLCFDEGERWVIKT-TGTDLFEIAVHEIGHIL 201
Query: 133 GLMHPG-SYNGGYPVYGVDNDYENDSFLT 160
GL H YP Y +
Sbjct: 202 GLEHSNIQGTIMYPSYSGYRPNLQLHYDD 230
>gi|163746969|ref|ZP_02154326.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Oceanibulbus
indolifex HEL-45]
gi|161380083|gb|EDQ04495.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Oceanibulbus
indolifex HEL-45]
Length = 354
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 48/134 (35%), Gaps = 2/134 (1%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + + + + + G + + + + G GND ++G ++
Sbjct: 32 DTINGVATEGDVIPDNGADVDLIGTAGDDRLEGVEGDDHIDGRYGNDTLLGAGGDDNLEG 91
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA--NEHKQDFLSDVERLRFADQ 349
+G+D +G G D + + + I + + D L+ +E++ F+D+
Sbjct: 92 GAGDDFLNGGLGEDAAIFLGNASSFTIRFSKTGDVTVSDRVGAEGVDTLTGIEQIVFSDR 151
Query: 350 CIDSVNVKQRSILE 363
D + L
Sbjct: 152 TFDLGQFASLAALS 165
>gi|47223012|emb|CAG07099.1| unnamed protein product [Tetraodon nigroviridis]
Length = 592
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 45/161 (27%), Gaps = 30/161 (18%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W I Y +T + + R A W V L FE +
Sbjct: 73 LTGQKWQRAHITYSIKNVTPKVGA-------RETHDAIRRAFDVWQGVTPLRFEAVPYSA 125
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + D+
Sbjct: 126 LETGRRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPN 185
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + D EN
Sbjct: 186 HDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMDTEN 226
>gi|255745829|ref|ZP_05419777.1| RTX toxins and related Ca2+-binding proteins [Vibrio cholera CIRS
101]
gi|255736904|gb|EET92301.1| RTX toxins and related Ca2+-binding proteins [Vibrio cholera CIRS
101]
Length = 4533
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 57/220 (25%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4168 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKSNI 4227
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4228 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4286
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ G D+
Sbjct: 4287 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVVK 4346
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 4347 -----LMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRD 4381
Score = 38.6 bits (88), Expect = 3.1, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 57/193 (29%), Gaps = 25/193 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNM--- 260
+ I ++ GDD + GG + + +++ + +
Sbjct: 4251 GNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSV 4310
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYA 311
TI + +E +GND N +GNDV +G G D A
Sbjct: 4311 TIGNNNQVE---LGAGNDFANIFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIATA 4367
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRSILEYTA 366
S + E ++ +DV+ + ID + + +
Sbjct: 4368 ISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGID 4427
Query: 367 SYEDLIQVIGQDV 379
+ + G D+
Sbjct: 4428 WQKLWFERSGYDL 4440
Score = 37.8 bits (86), Expect = 5.3, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 65/265 (24%), Gaps = 33/265 (12%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ Y A ++IVA+ G Y + T+Y G+D +
Sbjct: 13 FTGNYSADDGNNNIVAIGF--GGQIH-----AYGGDDHVTVGSIGATVYTGSGNDTVVGG 65
Query: 235 L------IGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSA 285
+ + N++ A I+ + G+ G+ G +A
Sbjct: 66 SAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHL-GNHGDVSYGGAAA 124
Query: 286 NNVFF--ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N SGN F G+ G + ++ + ++
Sbjct: 125 YNGITRKGLSGNVTFAGAGGYNALWHETNQGNLSFTGAGAGNKLDRTWSNRYQGSHGDVT 184
Query: 344 LRFADQCIDSVN--VKQRSILEYTASYEDLI------------QVIGQDVFESMKHFYEF 389
A + + L+ + + + +
Sbjct: 185 FDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTHQAEDVY 244
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNV 414
+ G Y Y D+ +
Sbjct: 245 TQTRGNIRFEGVGGYNSLYSDVAHG 269
Score = 37.8 bits (86), Expect = 5.9, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 38/164 (23%), Gaps = 11/164 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + N + +G G + ++ S SG DT
Sbjct: 8 SVEYFFTGNYSADDGNNNIVAIGFGG--QIHAYGGDDHVTVGSIGATVYTGSGNDTVV-- 63
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTA 366
S K+ +IV A + S + FA ID + A
Sbjct: 64 GGSAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAA 123
Query: 367 SYE--DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+Y + G F + E
Sbjct: 124 AYNGITRKGLSGNVTFAGAGGYNAL-WHETNQGNLSFTGAGAGN 166
>gi|193076527|gb|ABO11182.2| iron-regulated protein [Acinetobacter baumannii ATCC 17978]
Length = 979
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/261 (15%), Positives = 76/261 (29%), Gaps = 15/261 (5%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
T D G G+ T++ + + + G
Sbjct: 664 DTLNGTKNNDTLNGGWGNDKLNGGAGQDTLIGGSGNAVMTGG-----DYEKDIYIFQSGH 718
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL------G 203
D ND + A+F V + + V K +G
Sbjct: 719 GQDIINDKSYDWTNLQYFNDVKFEGANFTDAQFLRVGNDL-VIKAFGTDDSVSFKNYLND 777
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
N+ Y + + T D + + L G N + + ++ G + T+
Sbjct: 778 NDSYSRDFNFIFADKTLTTADVMN---IVIPLNGTDGNDVQNGWKGKDNLLGSLGDDTLN 834
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G +GND++ G N++ +GND G G DT + + N
Sbjct: 835 GLAGDDWLEGGAGNDILNGGEGNDLLEGGAGNDTLTGGIGADTAIFKILAGFGNDATGGN 894
Query: 324 AIIVYDANEHKQDFLSDVERL 344
+ + Q ++ L
Sbjct: 895 GVDTWSDFNISQGDKINISEL 915
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/234 (15%), Positives = 67/234 (28%), Gaps = 17/234 (7%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + +++ G+ ND + G N+ +G D G SG Y IY F
Sbjct: 657 IIGTKLDDTLNGTKNNDTLNGGWGNDKLNGGAGQDTLIGGSGN--AVMTGGDYEKDIYIF 714
Query: 322 EN--AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
++ + + + L ++F + +I+ G D
Sbjct: 715 QSGHGQDIINDKSYDWTNLQYFNDVKFE-------GANFTDAQFLRVGNDLVIKAFGTDD 767
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF----GSDRGAAARHYITHGVKEGR 435
S K++ S RD F + D+ N+ G+D + G
Sbjct: 768 SVSFKNYLNDNDSYSRDFNFIFADKTLTTADVMNIVIPLNGTDGNDVQNGWK--GKDNLL 825
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
L +A + L + G D + + +
Sbjct: 826 GSLGDDTLNGLAGDDWLEGGAGNDILNGGEGNDLLEGGAGNDTLTGGIGADTAI 879
Score = 40.9 bits (94), Expect = 0.65, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 54/228 (23%), Gaps = 17/228 (7%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+ K L + L GQD + +
Sbjct: 656 FIIGTKLDDTLNGTKNNDTLNGGWGNDKLNGGAGQDTLIGGSGNAVMTGGDYEKDIYIFQ 715
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
G D+ N D Y EG N A ++ +I AF
Sbjct: 716 S--GHGQDIINDKSYDWTNL--QYFNDVKFEGAN--FTDAQFLRVGNDLVIKAFGTDD-- 767
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF----GSDRGAAARHYITHGVKEG 518
V ++ N R F + D+ N+ G+D + G
Sbjct: 768 -SVSFKNYLNDNDSYSRDFNFIFADKTLTTADVMNIVIPLNGTDGNDVQNGWK--GKDNL 824
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
L +A + L + G D G ++T
Sbjct: 825 LGSLGDDTLNGLAGDDWLEGGAGNDILNGGEGND--LLEGGAGNDTLT 870
>gi|302875309|ref|YP_003843942.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578166|gb|ADL52178.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 2147
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 65/490 (13%), Positives = 128/490 (26%), Gaps = 60/490 (12%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + T S D++ + G G + N I L
Sbjct: 1407 GGNGNDTINAGSGNDTLNGGSGNDTLSGDIGDDIYIFKKGYGQDIIDNHTATINDIDILK 1466
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G V D T + S
Sbjct: 1467 MDGIKVEDIDVIRQGKDLILIIKDTKESLTIQGYFNYGTYSLDKIVF------------- 1513
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G++ ++ K++ + + I G D LD + G I + SI G
Sbjct: 1514 ---DGNVEWDVDKVKEIIRYIEGTEAIDTIQGFDDLDNVIQGYGGADIITGGSNKDSIFG 1570
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N I + I+ + G + +D + G+ N++ GND G G D+
Sbjct: 1571 GSGNDNIHGNDGIDILSGGNEDDSLYGDDGNDILKGELGNDTLYGGLGNDSL-------- 1622
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
D + L V+ IL+ + L+ +
Sbjct: 1623 --------------------DGAEGDDTLFGEQGDDSLVSGIGNDILDGGLGNDYLVGGL 1662
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D + +++ G+DI ++ + ++ + + + G
Sbjct: 1663 GNDTYTFQENY-------GQDII-NNLNVGANNSEVDILNMVGIQSVDVTAVRSGQDLIL 1714
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
I + + +A K + D+ + + +L
Sbjct: 1715 KVKEKNDSVSIQGYFNYDSAALSNIIFADNVKWDVTKIKEMPITVEGTDNVDTIIGFSEL 1774
Query: 496 RNV----FGSDRGAAARHYIT----HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
+N+ G+D + + T G L+ + L +
Sbjct: 1775 KNIVLGKGGTDIITGSSNADTLDGGLGNDMLAGGAGDDILKGGDGDDSLTGGIGNDILDG 1834
Query: 548 QAGKDHFSNF 557
+ G DH
Sbjct: 1835 EQGNDHLIGS 1844
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/418 (12%), Positives = 116/418 (27%), Gaps = 32/418 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D I T + D G +++S + LG
Sbjct: 1596 YGDDGNDILKGELGNDTLYGGLGNDSLDGAEGDDTLFGEQGDDSLVSGIGNDILDGGLGN 1655
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--------- 185
+ G Y +Y D + + +++
Sbjct: 1656 DYLVGG-LGNDTYTFQENYGQDIINNLNVGANNSEVDILNMVGIQSVDVTAVRSGQDLIL 1714
Query: 186 -----SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+D V++Q + +L N I+ V+ + + G D +D +
Sbjct: 1715 KVKEKNDSVSIQGYFNYDSAALSNIIFADNVKWDVTKIKEMPITVEGTDNVDTIIGFSEL 1774
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
I L I G T+ + + G +G+D++ G ++ GND+ DG
Sbjct: 1775 KNIVLGKGGTDIITGSSNADTLDGGLGNDMLAGGAGDDILKGGDGDDSLTGGIGNDILDG 1834
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
G D + Y + + D ++ +D + +
Sbjct: 1835 EQGNDHLIGSYGNDTYIFRKGYGEERI-----ENYDSGTNS-----SDIDVLKMVGIMPE 1884
Query: 361 ILEYTASYEDLI-QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
++ +DLI + + +++ ++ +G I F + + +
Sbjct: 1885 EVKVLRENDDLILTIKDTNDKVTIQGYFNYGSYAVNKIVF------ENNVEWDITKTKEI 1938
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
T + D F + +D+I L + + G +
Sbjct: 1939 AMLEAIEGTDAGENLTGFDDFNTILMGKGGDDIIQGKNGNDKLFGDDGTDYLDGGSGD 1996
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/312 (16%), Positives = 92/312 (29%), Gaps = 18/312 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ S F I GDD + + GG N I + S+ G +
Sbjct: 935 DTLVGYSDFNNIIKGYDGDDNITGSNYKDELYGGNGNDIIVAGVGDDSLEGGAGIDNLDG 994
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T + + G ND + G N++ SG D+ +G +G DT+ + I +
Sbjct: 995 GTGNDLLNGGYDNDTLKGGDGNDILIGGSGYDILEGGNGNDTYIFKQGFRQDIINNSNTS 1054
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM- 383
+ + D L +E L+ +D + + T Y + D
Sbjct: 1055 NDIT-----EVDILK-MEGLKESDVRVSRQGQNLILGIRETGEYVKVQGYFNYDSSALKK 1108
Query: 384 ---KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
E+ + + R + + + D+ + + G E D
Sbjct: 1109 IIFDGNVEWDIEKTRQVAMATTIEGTEGRDIIQGYSD---FNNKIVAKGGDDEVTGSDNN 1165
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
L+ A + L + + +G D + + + G D G
Sbjct: 1166 DTLDGGAGIDILNGKGGNDTLIGGMGNDSLLGGTGNDSLLGGIGNDILKGEAGDDTLNGG 1225
Query: 501 SDRGAAARHYIT 512
Y T
Sbjct: 1226 IGNDTLIGGYGT 1237
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/336 (13%), Positives = 95/336 (28%), Gaps = 30/336 (8%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G + +D + N I +I G + T +++ GSSG+D + G + +
Sbjct: 363 GTEEIDKIVAFSNFNTIVNGKGGEDTISGNNGDDVFYGGTGNDTLSGSSGSDTLRGENDD 422
Query: 287 NVFFESSGNDVFDGSSGLDTFF---------------YYAPSYLYKIYRFENAIIVYDAN 331
++ G+D G +G D + + +Y
Sbjct: 423 DILLGGIGDDELYGGAGNDKLYGESVNPLGTETGNDILDGGTGNDFLYGGYGVDTYIFKR 482
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG--QDVFESMKHFYEF 389
+ +D +++ I + + S ++ +DL+ +I D +F
Sbjct: 483 GYGEDTINNSVPSGSNSVDILKMIGIKESEVKAVRESDDLLLIIKETNDSVRIQNYFKGG 542
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
S G+ + D + + + + + F +
Sbjct: 543 SYSLGKMVFDDVEWDVTKAKEKAMLSTIEGTEEIDKIVAF--------SNFNTIVNGKGG 594
Query: 450 EDLINA-FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
ED I+ D G D S + D + LG D G+
Sbjct: 595 EDTISGNNGDDVFYGGTGNDTLSGSSGSDTLRGENDDDILLGGIGDDELYGGAGNDKL-- 652
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
Y G L+ ++ L +
Sbjct: 653 -YGESVNPLGTE-TGNDILDGGTGNDFLYGGYGVDT 686
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/324 (12%), Positives = 82/324 (25%), Gaps = 58/324 (17%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + + I TI G+D G N I + G + + ++
Sbjct: 1347 FDTKVEGRGGIDTILGDSGNDNFK----GEGGNDILTGGSGNDVLDGGDGDDSLDGGQGD 1402
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI---------- 318
+ +VG +GND + S N+ SGND G G D + + I
Sbjct: 1403 DLLVGGNGNDTINAGSGNDTLNGGSGNDTLSGDIGDDIYIFKKGYGQDIIDNHTATINDI 1462
Query: 319 ----------------------------------------YRFENAIIVYDANEHKQDFL 338
Y + + + D
Sbjct: 1463 DILKMDGIKVEDIDVIRQGKDLILIIKDTKESLTIQGYFNYGTYSLDKIVFDGNVEWDVD 1522
Query: 339 SDVERLRFADQCIDSVNVKQ----RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
E +R+ + ++ ++++ + + +D ++G
Sbjct: 1523 KVKEIIRYIEGTEAIDTIQGFDDLDNVIQGYGGADIITGGSNKDSIFGGSGNDNIHGNDG 1582
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
DI Y D N Y G + L + L++
Sbjct: 1583 IDILSGGNEDDSLYGDDGNDILKGELGNDTLYGGLGNDSLDGAEGDDTLFGEQGDDSLVS 1642
Query: 455 AFADAPDLVQVGKDHFSNFGCEEG 478
+ +G D+ +
Sbjct: 1643 GIGNDILDGGLGNDYLVGGLGNDT 1666
Score = 53.6 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 66/473 (13%), Positives = 131/473 (27%), Gaps = 54/473 (11%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
V F + S N + +D R +L
Sbjct: 580 VAFSNFNTIVNGKGGEDTISGNNGDDVFYGGTGNDTLSGSSGSDTLRGENDDDILLGGIG 639
Query: 125 LHEIGHALG-----------LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
E+ G L + G D Y T + +D++
Sbjct: 640 DDELYGGAGNDKLYGESVNPLGTETGNDILDGGTGNDFLYGGYGVDTYIFRRGYGEDTIN 699
Query: 174 DASFGYCATPMVSDIVAVQKIYGAP--KGSLGNNIYKIEVQQKDSPFIQTIYDSG----G 227
++ + DI+ + I + +++ I + DS IQ + G G
Sbjct: 700 NS---VPSGSNSVDILKMIGIKESEVKAVRESDDLLLIIKETNDSVRIQNYFKGGSYSLG 756
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+ D K + E SS + N T+ +++ G G+D + N+
Sbjct: 757 KMVFDDVEWDAAKVNAIVVQERGSS--PLDGNDTLIGTEGSDTLYGGLGDDTLKSLGGND 814
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ +G D+ +G SG D + + I + + + K +++ E
Sbjct: 815 ILEGGAGTDILEGGSGNDIYIFKKGYREDTIINSTLEDNISEIDTLKMLGITEDEVKAVR 874
Query: 348 DQCIDSV-------NVKQRSILEYTASYED--------------------LIQVIGQDVF 380
+ + VK + Y +S D L + G +V
Sbjct: 875 EGQDLRIFVKETGEGVKIKDYFNYGSSAIDKIVFEGNVEWDIAKTKEKAMLSAIEGTEVN 934
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+++ + +F D+ D+L G+D A G
Sbjct: 935 DTLVGYSDFNNIIKGYDGDDNITGSNYKDELYGGNGNDIIVA-----GVGDDSLEGGAGI 989
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
L+ ++ L + + G D + + Y+
Sbjct: 990 DNLDGGTGNDLLNGGYDNDTLKGGDGNDILIGGSGYDILEGGNGNDTYIFKQG 1042
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 66/478 (13%), Positives = 124/478 (25%), Gaps = 46/478 (9%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
NG + D GIG T + G ++
Sbjct: 41 YGNGGDDILHGAGGDDTIYGGEGNDTLEGGIGSDTYIFQKGY-------GQDIINNFTEI 93
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+D V + QD +++ + + V K Y
Sbjct: 94 NDTTEIDTLKMVGIREEEVYAVRDGQDLILNIKYT--------NDKMVVKGY------FN 139
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
N Y +E D + + L N I + + + G + I
Sbjct: 140 NGTYSLEKIIFDGNVAWDVAKTNKMVLRTTVEGTEANNTISGIASTNTVVIGKGGDDIIT 199
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS--------GLDTFFYYAPSYL 315
+ + G G+D + G N+ + +GND G S G D +
Sbjct: 200 GINGNDLLYGGDGDDKLSGGLGNDDLYGGAGNDKLYGESVNPSGTEIGNDIL--DGGTGN 257
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+Y + +D +++ I + + S ++ +DL+ +I
Sbjct: 258 DFLYGGYGVDTYIFKRGYGEDTINNSVPSGSNSVDILKMIGIKESEVKAVRESDDLLLII 317
Query: 376 G--QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
D +F S G+ + D + + + + +
Sbjct: 318 KETNDSVRIQNYFKGGSYSLGKMVFDDVEWDVTKAKEKAMLSTIEGTEEIDKIVAF---- 373
Query: 434 GRNPDAFKALEYIASHEDLINA-FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
F + ED I+ D G D S + D + LG
Sbjct: 374 ----SNFNTIVNGKGGEDTISGNNGDDVFYGGTGNDTLSGSSGSDTLRGENDDDILLGGI 429
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
D G+ Y G L+ ++ L + + + G
Sbjct: 430 GDDELYGGAGNDKL---YGESVNPLGTE-TGNDILDGGTGNDFLYGGYGVDTYIFKRG 483
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 66/489 (13%), Positives = 133/489 (27%), Gaps = 62/489 (12%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
I + +D G+G T+ S + G G +Y Y
Sbjct: 784 DGNDTLIGTEGSDTLYGGLGDDTLKSLGGNDILEGGAGTD-ILEGGSGNDIYIFKKGYRE 842
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
D+ + S + +D++ + ++ AV++ I+ E +
Sbjct: 843 DTIINSTL-----EDNISEIDTLKMLGITEDEVKAVRE---GQDLR----IFVKETGEGV 890
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV-GS 274
Y S D + S+I G E N T+ ++ +++ G
Sbjct: 891 KIKDYFNYGSSAIDKIVFEGNVEWDIAKTKEKAMLSAIEGTEVNDTLVGYSDFNNIIKGY 950
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D + G++ + + +GND+ G D+ + + + ++ +
Sbjct: 951 DGDDNITGSNYKDELYGGNGNDIIVAGVGDDSL--EGGAGIDNLDGGTGNDLL--NGGYD 1006
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D L IL + Y+ L G D + + F + ++
Sbjct: 1007 NDTLKG---------------GDGNDILIGGSGYDILEGGNGNDTYIFKQGFRQDIINNS 1051
Query: 395 R------DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI-- 446
++ L D + G + R + +G AL+ I
Sbjct: 1052 NTSNDITEVDILKMEGLKESDVRVSRQGQNLILGIRETGEYVKVQGYFNYDSSALKKIIF 1111
Query: 447 --------ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ A + +S+F + D + D L
Sbjct: 1112 DGNVEWDIEKTRQVAMATTIEGTEGRDIIQGYSDFNNKIVAKGGDDEVTGSDNNDTLDGG 1171
Query: 499 FGSDRGAAA-------------RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
G D G L+ A + L +
Sbjct: 1172 AGIDILNGKGGNDTLIGGMGNDSLLGGTGNDSLLGGIGNDILKGEAGDDTLNGGIGNDTL 1231
Query: 546 LVQAGKDHF 554
+ G D +
Sbjct: 1232 IGGYGTDIY 1240
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 67/556 (12%), Positives = 145/556 (26%), Gaps = 59/556 (10%)
Query: 56 RWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG 115
R + +S + + + D + S+N T + + D G+G
Sbjct: 1137 RDIIQGYSDFNN---KIVAKGGDDEVTGSDN--NDTLDGGAGIDILNGKGGNDTLIGGMG 1191
Query: 116 KGTILSHNALHEIGHALG---LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
++L + +G L + G D QD +
Sbjct: 1192 NDSLLGGTGNDSLLGGIGNDILKGEAGDDTLNGGIGNDTLIGGYGTDIYKFKKGFGQDII 1251
Query: 173 MDASFGYCATPMVSDIVAV-----------QKIYGAPKGSLGNNIYKIEVQQKDSPFIQT 221
++++ D+ + Q + K + + + S +
Sbjct: 1252 INSNETNAFELDRLDMDGIKEEEVKATREGQDLVLIIKETEESIRIQDYFTYGSSAISKI 1311
Query: 222 IYDSGGDD--------LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+D + + ++ + I+ ++ + + G TI + ++ G
Sbjct: 1312 KFDDAEWNITKVKEMAMANVIEGTEGDDQINAYSDFDTKVEGRGGIDTILGDSGNDNFKG 1371
Query: 274 SSGNDVVIGNS------------------ANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
GND++ G S +++ +GND + SG DT S
Sbjct: 1372 EGGNDILTGGSGNDVLDGGDGDDSLDGGQGDDLLVGGNGNDTINAGSGNDTL--NGGSGN 1429
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ I + QD + + + +K I + ++ +
Sbjct: 1430 DTLSGDIGDDIYIFKKGYGQDIIDNHTATINDIDILKMDGIKVEDIDVIRQGKDLILIIK 1489
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
+++ ++ +G I FD + D+ YI
Sbjct: 1490 DTKESLTIQGYFNYGTYSLDKIVFDG----------NVEWDVDKVKEIIRYIEGTEAIDT 1539
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
I + + G N +G + Y D
Sbjct: 1540 IQGFDDLDNVIQGYGGADIITGGSNKDSIFGGSGNDNIHGNDGIDILSGGNEDDSLYGDD 1599
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
N Y G + L + L++ + G D+
Sbjct: 1600 GNDILKGELGNDTLYGGLGNDSLDGAEGDDTLFGEQGDDSLVSGIGNDILDGGLGNDYLV 1659
Query: 556 NFGYEEGRSITFNPDL 571
G + TF +
Sbjct: 1660 --GGLGNDTYTFQENY 1673
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 64/461 (13%), Positives = 111/461 (24%), Gaps = 103/461 (22%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G GNN + T+ S G D L G + I L + G
Sbjct: 593 GGEDTISGNN---GDDVFYGGTGNDTLSGSSGSDTL----RGENDDDILLGGIGDDELYG 645
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTF---FYY 310
N + +V + +GND++ G + N+ + G D + G DT
Sbjct: 646 GAGNDKLYGESVNP-LGTETGNDILDGGTGNDFLYGGYGVDTYIFRRGYGEDTINNSVPS 704
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA----------------------- 347
+ + + A D L ++ +
Sbjct: 705 GSNSVDILKMIGIKESEVKAVRESDDLLLIIKETNDSVRIQNYFKGGSYSLGKMVFDDVE 764
Query: 348 -------------------DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D + + L + L + G D+ E
Sbjct: 765 WDAAKVNAIVVQERGSSPLDGNDTLIGTEGSDTLYGGLGDDTLKSLGGNDILEGGAGTDI 824
Query: 389 FGLSEGRDITFDSYLYLGSY------DDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-- 440
G DI Y +D + + + V+EG++ F
Sbjct: 825 LEGGSGNDIYIFKKGYREDTIINSTLEDNISEIDTLKMLGITEDEVKAVREGQDLRIFVK 884
Query: 441 ---------KALEYIASHED--------------------LINAFADAPDLVQVGKDHFS 471
Y +S D L + VG F+
Sbjct: 885 ETGEGVKIKDYFNYGSSAIDKIVFEGNVEWDIAKTKEKAMLSAIEGTEVNDTLVGYSDFN 944
Query: 472 NF-----GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
N G + + LY G+ +D+ D G+
Sbjct: 945 NIIKGYDGDDNITGSNYKDELYGGNGNDIIVAGVGDDSLE----GGAGIDNLDGGTGNDL 1000
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
L ++ L + + +G D G + F
Sbjct: 1001 LNGGYDNDTLKGGDGNDILIGGSGYD--ILEGGNGNDTYIF 1039
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 77/282 (27%), Gaps = 12/282 (4%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
I +++ L + G E + G+ G+D++ G ++ + G
Sbjct: 4 NITNQQSFEALPPSTTGGYFGSPTADIYLGEYYNEEIYGNGGDDILHGAGGDDTIYGGEG 63
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND +G G DT+ + I N + D E + + + + +V
Sbjct: 64 NDTLEGGIGSDTYIFQKGYGQDII---NNFTEINDTTEIDTLKMVGIRE-----EEVYAV 115
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG---SYDDL 411
Q IL + + ++ + F + D+ + + L +
Sbjct: 116 RDGQDLILNIKYTNDKMVVKGYFNNGTYSLEKIIFDGNVAWDVAKTNKMVLRTTVEGTEA 175
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH-F 470
N G + L + L + G D +
Sbjct: 176 NNTISGIASTNTVVIGKGGDDIITGINGNDLLYGGDGDDKLSGGLGNDDLYGGAGNDKLY 235
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
G + D D L +G D R Y
Sbjct: 236 GESVNPSGTEIGNDILDGGTGNDFLYGGYGVDTYIFKRGYGE 277
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 68/500 (13%), Positives = 124/500 (24%), Gaps = 66/500 (13%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ S+ I +G + + ++ D G + + L
Sbjct: 1559 ITGGSNKDSIFGGSG-NDNIHGNDGIDILSGGNEDDSLYGDDGNDILKGELGNDTLYGGL 1617
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G ++G D S++S Y + +D Q
Sbjct: 1618 GNDSLDGAEGDDTLFGEQGD-------DSLVSGIGNDILDGGLGNDYLVGGLGNDTYTFQ 1670
Query: 193 KIYG---APKGSLG-NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ YG ++G NN + + G DL+ I
Sbjct: 1671 ENYGQDIINNLNVGANNSEVDILNMVGIQSVDVTAVRSGQDLILKVKEKNDSVSI---QG 1727
Query: 249 SWSSIGGYEKNMTIAQHTVIE---------SVVGSSGNDVVIG-NSANNVFFESSGNDVF 298
++ N+ A + + +V G+ D +IG + N+ G D+
Sbjct: 1728 YFNYDSAALSNIIFADNVKWDVTKIKEMPITVEGTDNVDTIIGFSELKNIVLGKGGTDII 1787
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
GSS DT + I+ D
Sbjct: 1788 TGSSNADTL--DGGLGNDMLAGGAGDDILKGG-----------------DGDDSLTGGIG 1828
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF--- 415
IL+ + LI G D + K + E R +DS D L+ V
Sbjct: 1829 NDILDGEQGNDHLIGSYGNDTYIFRKGY-----GEERIENYDSGTNSSDIDVLKMVGIMP 1883
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ + +K+ + + S+ F + + +
Sbjct: 1884 EEVKVLRENDDLILTIKDTNDKVTIQGYFNYGSYAVNKIVFENNVEWDITKTKEIAMLEA 1943
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
EG + + L G D + L +
Sbjct: 1944 IEGTDAGENLTGFDDFNTILMGKGGDDIIQGK--------------NGNDKLFGDDGTDY 1989
Query: 536 LINAFADAPDLVQAGKDHFS 555
L D +G D +
Sbjct: 1990 LDGGSGDDSLFGGSGNDTYI 2009
>gi|114640115|ref|XP_508724.2| PREDICTED: macrophage metalloelastase [Pan troglodytes]
Length = 470
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 67/193 (34%), Gaps = 47/193 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W ++I Y+ + T D+ R A WS V L F + + +DI
Sbjct: 109 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 161
Query: 82 ISSNNGYVCTPRY-------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + + + S + +FD+ + W G GT L A+HEI
Sbjct: 162 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H P + Y+ T +S DI
Sbjct: 221 GHSLGLGHS-----SDPKAVMFPTYKYVDINTFRLS--------------------ADDI 255
Query: 189 VAVQKIYGAPKGS 201
+Q +YG PK +
Sbjct: 256 RGIQSLYGDPKEN 268
>gi|115840549|ref|XP_793994.2| PREDICTED: similar to Interstitial collagenase precursor (Matrix
metalloproteinase-1) (MMP-1) [Strongylocentrotus
purpuratus]
Length = 290
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 62/196 (31%), Gaps = 52/196 (26%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH---- 76
Q W + Y+ TT DI + + A WS V ++TF + +
Sbjct: 67 QRWPKNDLTYRISTYTTKLP-VDIVD------DAVSRAFKLWSDVANITFTKITSGKADI 119
Query: 77 ---------SDIKFISSNN---GYVCTP---RYDSRYFMEINFDKADVWRYGIGKGTILS 121
D + + G+ P I+ D+ + W G L
Sbjct: 120 DISFHRGDHGDSRPFDGSGLVLGHAFPPGLITSRPDLIGSIHLDEEENWTANSRSGKNLW 179
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
HEIGHA+GL H L ++M + P S+
Sbjct: 180 LTVGHEIGHAIGLSHS-------------------RVLPALMYPWYP-------SYNPSF 213
Query: 182 TPMVSDIVAVQKIYGA 197
T DI VQ +YGA
Sbjct: 214 TLDRDDIEGVQFLYGA 229
>gi|37676690|ref|NP_937086.1| RTX repeat-containing cytotoxin [Vibrio vulnificus YJ016]
gi|37201233|dbj|BAC97056.1| RTX (repeat in toxin) cytotoxin [Vibrio vulnificus YJ016]
Length = 5206
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 58/220 (26%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4829 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI 4888
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4889 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4947
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ S G D+
Sbjct: 4948 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNYNRINASAGNDVVK 5007
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N + A G
Sbjct: 5008 -----LMGYHAVLNGGEGEDHLIAAAISKFSQFNGGEGRD 5042
Score = 39.8 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 71/295 (24%), Gaps = 38/295 (12%)
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
Y +Y D S+++ + + V I A
Sbjct: 6 WRSVEYFFTGNYSADDGNNSIVAIGFGGEIHAYGGDDHVT---VGSIGATVYTGSGNDTV 62
Query: 202 LGNNIY----------------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+G + Y K + + G +D G +Y
Sbjct: 63 VGGSAYLRVEDTTGHLSVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGA 122
Query: 246 NTESWSSIGGYEKNMTI--AQHTVIESVVGSSGNDVVIGNSANNVFF--------ESSGN 295
+ + G N+T A + GN G A N S G+
Sbjct: 123 AAYNGITRKGLSGNVTFKGAGGYNALWHETNQGNLSFAGAGAGNKLDRTWFNRYQGSRGD 182
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD------VERLRFADQ 349
FDG+ ++ + + + L +ER R
Sbjct: 183 VTFDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTR--QA 240
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQ-DVFESMKHFYEFGLSEGRDITFDSYL 403
+ E Y L + D+ S Y +G +FD+
Sbjct: 241 EDVYAQTRGNIRFEGVGGYNSLYSDVAHGDIHFSGGGAYNTITRKGSGSSFDAQG 295
>gi|319894304|gb|ADV76433.1| RTX toxin RtxA [Vibrio vulnificus]
Length = 4700
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 58/220 (26%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+L+ +++ G + A + G G+DV +N+
Sbjct: 4323 DFLRNSGHLQGDGDINLSLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI 4382
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4383 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4441
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ S G D+
Sbjct: 4442 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGDDFANVFGNYNRINASAGNDVVK 4501
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N + A G
Sbjct: 4502 -----LMGYHAVLNGGEGEDHLIAAAISKFSQFNGGEGRD 4536
>gi|327484109|gb|AEA78516.1| RTX (Repeat in toxin) cytotoxin [Vibrio cholerae LMA3894-4]
Length = 4545
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 57/220 (25%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4168 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI 4227
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F G+D + G G DT A + + + D S
Sbjct: 4228 FTGGEGHDMGVLMGRENIMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4286
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ G D+
Sbjct: 4287 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNYNRINAGAGNDVVK 4346
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 4347 -----LMGYHAVLNGGDGDDHLIAAAISKFSQFNGGEGRD 4381
Score = 38.6 bits (88), Expect = 3.2, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 57/193 (29%), Gaps = 25/193 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNM--- 260
+ I ++ GDD + GG + + +++ + +
Sbjct: 4251 GNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSV 4310
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYA 311
TI + +E +GND N +GNDV +G G D A
Sbjct: 4311 TIGNNNQVE---LGAGNDFANVFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIAAA 4367
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRSILEYTA 366
S + E ++ +DV+ + ID + + +
Sbjct: 4368 ISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGID 4427
Query: 367 SYEDLIQVIGQDV 379
+ + G D+
Sbjct: 4428 WQKLWFERSGYDL 4440
Score = 38.6 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 37/164 (22%), Gaps = 11/164 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + N + +G G + ++ S SG DT
Sbjct: 8 SVEYFFTGNYSADDGNNNIVAIGFGG--QIHAYGGDDHVTVGSIGATVYTGSGNDTVV-- 63
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTA 366
S K+ + V A + S + FA ID + A
Sbjct: 64 GGSAYLKVEDSTGHLTVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAA 123
Query: 367 SYE--DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+Y + G F + E
Sbjct: 124 AYNGITRKGLSGNVTFAGAGGYNAL-WHETNQGNLSFTGAGAGN 166
Score = 38.2 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 57/200 (28%), Gaps = 28/200 (14%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ Y A ++IVA+ G Y + T+Y G+D +
Sbjct: 13 FTGNYSADDGNNNIVAIGF--GGQIH-----AYGGDDHVTVGSIGATVYTGSGNDTVVGG 65
Query: 235 L------IGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSA 285
+ + N++ A I+ + G+ G+ G +A
Sbjct: 66 SAYLKVEDSTGHLTVKGAAGYADINKSGDGNVSFAGAAGGVSIDHL-GNHGDVSYGGAAA 124
Query: 286 NNVFF--ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N SGN F G+ G + ++ + + A + + R
Sbjct: 125 YNGITRKGLSGNVTFAGAGGYNALWHET---------NQGNLSFTGAGAGNKLDRTWFNR 175
Query: 344 LRFADQCIDSVNVKQRSILE 363
+ + + + +
Sbjct: 176 YQGSHGDVTFDGAGAANSIS 195
>gi|325981131|ref|YP_004293533.1| Na-Ca exchanger/integrin-beta4 [Nitrosomonas sp. AL212]
gi|325530650|gb|ADZ25371.1| Na-Ca exchanger/integrin-beta4 [Nitrosomonas sp. AL212]
Length = 1040
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 61/236 (25%), Gaps = 4/236 (1%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + + G+ D G + N+ F GND G G DTF Y
Sbjct: 805 GTSGNDILQGTQFRDAFTGGAGNDTFNGGDGNDSMVGGGGNDTFLVENAGDTYSEAGGGG 864
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+V + ++VE L + + + L G D+
Sbjct: 865 TDLVISYLPN-HTLGANVENLLLTGTATTGIGNTLANTITGNGGNNTLNGSSGNDILNGA 923
Query: 384 KHFYEFGLSEGRDIT-FDSYLYLGSYDDLRNVFG--SDRGAAARHYITHGVKEGRNPDAF 440
G D F++ L + D F D T G P
Sbjct: 924 AGSDNISGGTGSDFIVFNTALNAATNVDTLADFNVIDDTIRLENAIFTQFTAAGAIPANT 983
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
A D + + D N + F T L + D +
Sbjct: 984 LVSGPGAVALDSNDFLIYNTTNGNLYYDADGNGAGAQVAFATLTGTPALTAADFVI 1039
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 56/258 (21%), Gaps = 14/258 (5%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
F L + N S L+ +
Sbjct: 767 NFSFNLSGAVNATIGNASASATIIDNESAAPAAPIAIAGTSGNDILQGTQFRDAFTGGAG 826
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD---DLRNVFGSDRGAAARHYITHG 514
+ G D G + V Y + DL + + A
Sbjct: 827 NDTFNGGDGNDSMVGGGGNDTFLVENAGDTYSEAGGGGTDLVISYLPNHTLGANVENLLL 886
Query: 515 VKEGRNPDAFKALEYIASHEDLINAF---ADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
I + + AG D+ G I FN L
Sbjct: 887 TGTATTGIGNTLANTITGNGGNNTLNGSSGNDILNGAAGSDN--ISGGTGSDFIVFNTAL 944
Query: 572 YLTSYDDLWNVF-GSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSL 630
+ D F D + ++ I A I S ++ L
Sbjct: 945 NAATNVDTLADFNVIDDTIRLENAIFTQFT--AAGAIPANTLVSGPGAV---ALDSNDFL 999
Query: 631 SFDHKKVDLYTDYFGDGN 648
++ +LY D G+G
Sbjct: 1000 IYNTTNGNLYYDADGNGA 1017
>gi|4103168|gb|AAD01698.1| RTX protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
Length = 1805
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 51/350 (14%), Positives = 94/350 (26%), Gaps = 66/350 (18%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + +GND V G + ++ GND+ G G DT+ +
Sbjct: 1353 LFGTDGDDNINDWGRNSVIDAGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYIFSKG 1412
Query: 313 SYLYKIYRFENAI-----------IVYDANE---------------HKQDFLS------- 339
+Y N + E H D ++
Sbjct: 1413 HGQDIVYEDTNNDNRARDIDTLKFTDVNYAEVKFRRVDNDLMLFGYHDTDSVTVKSFYSH 1472
Query: 340 ---DVERLRFADQCIDSVNVKQRSI-LEYTASYED----------LIQVIGQDVFESMKH 385
++L FAD+ I + + + L T +D L G D+
Sbjct: 1473 VDYQFDKLEFADRSITRDELIKAGLHLYGTDGNDDIKDHADWDSILEGGKGNDILRGGYG 1532
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
+ S+G +Y + +D R +Y + N Y
Sbjct: 1533 ADTYIFSKGHG---QDIVYEDTNNDNRARDIDTLKFTDVNYAEVKFRRVDNDLM--LFGY 1587
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ I +F + F + R +T D +FG+D
Sbjct: 1588 HDTDSVTIKSFYNH------VDYQFDKLEFAD-RSITRDEL-----GKQGMALFGTDGDD 1635
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ + + + LI + G D +
Sbjct: 1636 NINDWGRN--SVIDAGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYI 1683
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/332 (14%), Positives = 92/332 (27%), Gaps = 66/332 (19%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI----- 325
++GS ++ + G++ +++ GND GS G DT+ + +Y N
Sbjct: 1096 LLGSQKDNNLSGSAGDDLLIGGEGNDTLKGSYGADTYIFSKGHGQDIVYEDTNNDNRARD 1155
Query: 326 ------IVYDANE---------------HKQDFLS----------DVERLRFADQCIDSV 354
+ E H D ++ ++L FAD+ I
Sbjct: 1156 IDTLKFTDVNYAEVKFRRVDNDLMLFGYHDTDSVTVKSFYSHVDYQFDKLEFADRSITRD 1215
Query: 355 NVKQRSI-LEYTASYED----------LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + + L T +D L G D+ + S+G +
Sbjct: 1216 ELIKAGLHLYGTDGNDDIKDHADWDSILEGGKGNDILRGGYGADTYIFSKGHG---QDIV 1272
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
Y + +D R +Y + N Y + I +F +
Sbjct: 1273 YEDTNNDNRARDIDTLKFTDVNYAEVKFRRVDNDLM--LFGYHDTDSVTIKSFYNH---- 1326
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
F + R +T D +FG+D + +
Sbjct: 1327 --VDYQFDKLEFAD-RSITRDEL-----GKQGMALFGTDGDDNINDWGRN--SVIDAGAG 1376
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ + LI + G D +
Sbjct: 1377 NDTVNGGNGDDTLIGGKGNDILRGGYGADTYI 1408
>gi|119357547|ref|YP_912191.1| 5'-nucleotidase domain-containing protein [Chlorobium
phaeobacteroides DSM 266]
gi|119354896|gb|ABL65767.1| 5'-Nucleotidase domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 3977
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 42/136 (30%), Gaps = 4/136 (2%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N + E + + + + V G+D + G+ N+ GND
Sbjct: 3712 GEGANIVYAGGEGSQDMELGSDDDELHGGDGDDYVGSLGGDDTLFGDDDNDTLKGGQGND 3771
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAI----IVYDANEHKQDFLSDVERLRFADQCID 352
DG G DT + Y I E + + A+ D + E RFAD +
Sbjct: 3772 SLDGGEGDDTVEFAGNFDDYTISYDEASDRYTIVDKTADRDGTDHVIGFEHFRFADGTKE 3831
Query: 353 SVNVKQRSILEYTASY 368
+
Sbjct: 3832 DIIDPTVKAFNPGDGA 3847
>gi|268679624|ref|YP_003304055.1| hypothetical protein Sdel_0991 [Sulfurospirillum deleyianum DSM
6946]
gi|268617655|gb|ACZ12020.1| hypothetical protein Sdel_0991 [Sulfurospirillum deleyianum DSM
6946]
Length = 679
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 61/306 (19%), Positives = 96/306 (31%), Gaps = 21/306 (6%)
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
F +N + + Y N VW+ I+ N G + + +
Sbjct: 87 NFGDKDNLNGNPFDFSTYYNGLTNSCVDYVWKAL----NIIGMNPSDFEGQNIPTSNADN 142
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQ-DSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+G Y N S S +Y + D G T + IYG
Sbjct: 143 VDGSLYNYLFGNTSGWSSSDASKGNYDAIYGSNNDDILRGDSKTDAIYGGGGKDDIYGG- 201
Query: 199 KGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
SL +Y + S TI + G+D LD GG L ++ G
Sbjct: 202 --SLAEKLYGGEGDDFIDGSLGNDTIEGAEGNDTLD----GGDGTDTLLGGTGDDNLFGD 255
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ T+ +++ G SG D ++G S N+ GND DG G DT Y
Sbjct: 256 AGDDTLNGGEDNDTLNGGSGLDTLLGESGNDTLIGGGGNDTLDGGEGSDTL---MGGDDY 312
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID-SVNVKQRSILEYTASYEDLIQVI 375
Y N + D++ + + E + + V + Y+ S L
Sbjct: 313 DTYLAGNGDTISDSDGSGR---VNFEGNMLSGGTFNKDTGVYEGDGGSYSLSGGTLTFTN 369
Query: 376 GQDVFE 381
G
Sbjct: 370 GAGTIT 375
>gi|84386478|ref|ZP_00989505.1| Autotransporter adhesin [Vibrio splendidus 12B01]
gi|84378583|gb|EAP95439.1| Autotransporter adhesin [Vibrio splendidus 12B01]
Length = 4872
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 59/220 (26%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4497 DFLRNSGHLQGDGDINVSLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVYYATGTSNI 4556
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D +
Sbjct: 4557 FTGGEGNDMGVLMGRENMMFGGEGNDTAVV-AGRINHVFLGAGDDESFVFGEGGEIDTGT 4615
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ S G D+
Sbjct: 4616 GRDYVVTSGNYNRVDTGGDQDYSVTIGNNNQVELGAGNDFANVFGNYNRINASGGNDVVK 4675
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y+ + N D A G
Sbjct: 4676 -----LMGYNAVLNGGEGDDHLIAAALSKFSQLNGGEGSD 4710
Score = 39.4 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 34/280 (12%), Positives = 72/280 (25%), Gaps = 48/280 (17%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
DI N + + + + +G + I
Sbjct: 4507 GDGDINVSLGNYNF----NWGGDGKDLGAYLGDNNNFWGGRGDDVYYATGTSNI------ 4556
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G N + G +N +M D+ + A D +
Sbjct: 4557 FTGGEGNDMGVLMGREN----------MMFGGEGNDTAVVAGRINHVFLGAGDDES---- 4602
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
++ + + SG + +D +S
Sbjct: 4603 ----------FVFGEGGEIDTGTGRDYVVTSGNYNRVDTGGDQD-----------YSVTI 4641
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + +V G+ + + + N+V N V +G G D A S
Sbjct: 4642 GNNNQVELGAGNDFANVFGNY--NRINASGGNDVVKLMGYNAVLNGGEGDDHLIAAALSK 4699
Query: 315 LYKIYRFENAII-VYDANEHKQDFLSDVERLRFADQCIDS 353
++ E + + V ++ + V+ + ID+
Sbjct: 4700 FSQLNGGEGSDVMVLGGFQNTFKGGTGVDSFVVSGDVIDN 4739
Score = 37.5 bits (85), Expect = 7.3, Method: Composition-based stats.
Identities = 39/258 (15%), Positives = 62/258 (24%), Gaps = 35/258 (13%)
Query: 188 IVAVQKIYGAPKGSLGNNIY----------------KIEVQQKDSPFIQTIYDSGGDDLL 231
I A +G Y K + + G +
Sbjct: 49 IGATVYTGSGNDTVVGGAAYLRVEDSVGNLNVKGAAGYADINKSGDGNVSFAGAAGGVSI 108
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV--GSSGNDVVIGNSANNVF 289
D G NY + + + G N+T S+ + GN G A N
Sbjct: 109 DHLGNRGDVNYGGVAAYNGITRKGLSGNVTFGGAGGYNSLWHETNQGNLSFTGAGAGNKL 168
Query: 290 F--------ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD- 340
S GN FDG ++ + + + L
Sbjct: 169 DRTWFNQYQGSRGNVTFDGVGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGA 228
Query: 341 -----VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ-DVFESMKHFYEFGLSEG 394
+ER R +D V + E Y + + D+ S Y +G
Sbjct: 229 GASNRIERTRQSD--DVYVETRGNIRFEGVGGYNSIYSDVAHGDIHFSGGGAYNKITRKG 286
Query: 395 RDITFDSYLYLGSYDDLR 412
F + D
Sbjct: 287 SGNDFKGEGLANANADEI 304
>gi|163794873|ref|ZP_02188842.1| calcium binding hemolysin protein, putative [alpha proteobacterium
BAL199]
gi|159179692|gb|EDP64219.1| calcium binding hemolysin protein, putative [alpha proteobacterium
BAL199]
Length = 690
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 14/189 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+P+ T+ + GDD +D + + + G E N ++ +
Sbjct: 511 GDGSGPTPYNDTLTGTPGDDTIDAL----AGDDVVFGGLGNDVLIGGEGNDALSGSYGND 566
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++VG +G+D + G+ ++ GND+ G SG DT + + + +
Sbjct: 567 TLVGGTGDDTLFGSLDDDQISGGDGNDLLIGGSGNDTL--SGGAGDDTLLADDGDDVADG 624
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + A + L+ + L G D+ +
Sbjct: 625 GDGNDLAL--------GAAGDDLLIGGNGDDTLDGAGGNDTLSGGAGDDILGGVDGDDSV 676
Query: 390 GLSEGRDIT 398
G D+
Sbjct: 677 LGGAGNDLL 685
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 60/316 (18%), Positives = 100/316 (31%), Gaps = 33/316 (10%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
DL ID + +I G E I T +S+VG+ G+D + G++ N+V +
Sbjct: 333 DLIGWSAAGLRIDAGAGA-DTILGSEYRDYIIGGTGADSLVGNGGDDTLQGDAGNDVLYG 391
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+G+DV DG +G DT + + L+ I A E D +D D
Sbjct: 392 GAGDDVLDGGAGADTLYGGEGNDLFVIRVENG-----TAPEFVGDVFADFGE---GDGIR 443
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
S + T + + L +G D+ G I S+ G+Y +
Sbjct: 444 LEGANISASAITLTVAEDGLTTSVGIDLN-------------GDGIPDVSFSIDGAYHSV 490
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ G +G P + +D I+A A + +
Sbjct: 491 IPTVTTAGGVTYTDIAFSEDGDGSGPTPYNDTLTGTPGDDTIDALAGDDVVFGGLGNDVL 550
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
G D+ D L G D + + + D L +
Sbjct: 551 IGGE------GNDALSGSYGNDTLVGGTGDDTL-----FGSLDDDQISGGDGNDLLIGGS 599
Query: 532 SHEDLINAFADAPDLV 547
++ L D L
Sbjct: 600 GNDTLSGGAGDDTLLA 615
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 43/166 (25%), Gaps = 13/166 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNTESWSSIGGYEKNMT 261
+ + I + GDD N + ++ G + N T
Sbjct: 63 FSDGSSLNVPQIMARIDGTAGDDTFSFGETAVGMKAADGNDVITTGGFADTLSGGDGNDT 122
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I+ + V G +GND + ++ +G+D DG +G D + +
Sbjct: 123 ISSGDGADIVSGGNGNDRINAGQGSDTVHGGAGDDTIDGGAGAD--LLSGGAGNDVLLGS 180
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
D L + ++
Sbjct: 181 GGQKNTGVNESAADDTLVG------GAGNDTLYGGGGNDLYRFSRG 220
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 7/131 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
S T+ GDD L D + GG N + + ++ G + T+
Sbjct: 555 GNDALSGSYGNDTLVGGTGDDTLFGSLDDDQISGGDGNDLLIGGSGNDTLSGGAGDDTLL 614
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ G GND+ +G + +++ +G+D DG+ G DT + + +
Sbjct: 615 ADDGDDVADGGDGNDLALGAAGDDLLIGGNGDDTLDGAGGNDTL--SGGAGDDILGGVDG 672
Query: 324 AIIVYDANEHK 334
V +
Sbjct: 673 DDSVLGGAGND 683
Score = 44.4 bits (103), Expect = 0.063, Method: Composition-based stats.
Identities = 46/427 (10%), Positives = 86/427 (20%), Gaps = 57/427 (13%)
Query: 67 DLTFEETSIHSDI--KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
++ F + ++++D S G + + AD + I+
Sbjct: 308 NIKFGDVTVNADALSSIAGSVTGGDDLIGWSAAGLRIDAGAGADTILGSEYRDYIIGGTG 367
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-------MMDASF 177
+ G G +YG D D + Y + A
Sbjct: 368 ADSLVGNGGDDTLQGDAGNDVLYGGAGDDVLDGGAGADTLYGGEGNDLFVIRVENGTAPE 427
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
++ GA + + E S I D D +
Sbjct: 428 FVGDVFADFGEGDGIRLEGANISASAITLTVAEDGLTTSVGIDLNGDGIPDVSFSIDGAY 487
Query: 238 GVKNYIDLNTES--WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
++ I E +++ G+ G+D + + ++V F GN
Sbjct: 488 HSVIPTVTTAGGVTYTDIAFSEDGDGSGPTPYNDTLTGTPGDDTIDALAGDDVVFGGLGN 547
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
DV G
Sbjct: 548 DVLIGGE----------------------------------------------GNDALSG 561
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
L + L + D G D D +
Sbjct: 562 SYGNDTLVGGTGDDTLFGSLDDDQISGGDGNDLLIGGSGNDTLSGGAGDDTLLADDGDDV 621
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
G + L+ ++ L D G D
Sbjct: 622 ADGGDGNDLALGAAGDDLLIGGNGDDTLDGAGGNDTLSGGAGDDILGGVDGDDSVLGGAG 681
Query: 476 EEGRFVT 482
+ +
Sbjct: 682 NDLLATS 688
Score = 37.8 bits (86), Expect = 5.5, Method: Composition-based stats.
Identities = 39/324 (12%), Positives = 70/324 (21%), Gaps = 30/324 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
++ +GGDD L + L GG + + ++ G E N
Sbjct: 358 YRDYIIGGTGADSLVGNGGDDTLQGDAGNDVLYGGAGDDVLDGGAGADTLYGGEGNDLFV 417
Query: 264 QHTVIESVVGSSGN--------------------DVVIGNSANNVFFESSGNDVFDGSSG 303
+ G+ + A + S G D+
Sbjct: 418 IRVENGTAPEFVGDVFADFGEGDGIRLEGANISASAITLTVAEDGLTTSVGIDLNGDGIP 477
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-----VERLRFADQCIDSVNVKQ 358
+F + + Y +D + L +
Sbjct: 478 DVSFSIDGAYHSVIPTVTTAGGVTYTDIAFSEDGDGSGPTPYNDTLTGTPGDDTIDALAG 537
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
++ + LI G D G D F S N
Sbjct: 538 DDVVFGGLGNDVLIGGEGNDALSGSYGNDTLVGGTGDDTLFGSLDDDQISGGDGNDLLIG 597
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
G D + ++ + A D + G D G +
Sbjct: 598 GSGNDTLSGGAGDDTLLADDGDDVADGGDGNDLALGAAGDDLLIGGNGDDTLDGAGGNDT 657
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSD 502
+ G D + G+
Sbjct: 658 LSGGAGDDILGGVDGDDSVLGGAG 681
>gi|47220689|emb|CAG11758.1| unnamed protein product [Tetraodon nigroviridis]
Length = 439
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 60/186 (32%), Gaps = 40/186 (21%)
Query: 35 LTTHRLSFDITELNPNAQ-----EVARWALGEWSKVVDLTFEETSIH-SDIKFISS---- 84
L++ I +P+ + R A WS V DLTF E +DI+
Sbjct: 78 WRKKSLTYRIYNYSPDMRRADIGAAVRAAFRYWSDVADLTFREIPYGRADIRLAFHKRDG 137
Query: 85 ----NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ + ++FD ++W G +GT L A HEIGHALGL H
Sbjct: 138 FCPFDGRGHVLAHAEPPESGVVHFDDDELWTEGSYRGTNLRIVAAHEIGHALGLGH---- 193
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ + + + DI +Q +YG
Sbjct: 194 ----------------------SQFSSALMAAVYTGYRVNFKLHWDDIRGIQALYGKRAT 231
Query: 201 SLGNNI 206
S +
Sbjct: 232 SSVDAT 237
>gi|166365707|ref|YP_001657980.1| hypothetical protein MAE_29660 [Microcystis aeruginosa NIES-843]
gi|166088080|dbj|BAG02788.1| hypothetical protein MAE_29660 [Microcystis aeruginosa NIES-843]
Length = 1289
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/269 (13%), Positives = 65/269 (24%), Gaps = 18/269 (6%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + G + + + G N A+ + G +++ G + ++ F
Sbjct: 989 TQTVVDVTGTQRLVGRAGYVNGVLVGNGGNYLDARGVFSPNGEG-KASELFGGTNGSDQF 1047
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G+D G G DTF+ + + E+ D L
Sbjct: 1048 KGLAGDDCMWGDGGADTFW----AGDDNDFADGGEGHDTIYGENGFDMLRG------DAG 1097
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ + L G D G D D
Sbjct: 1098 NDQIYGGTGNDDMYGGEGNDSLFGEDGIDDLNGGNGNDLVSGGLGN----DQVKGQAGND 1153
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
L G+D E + L S D + + +
Sbjct: 1154 TLIGGQGNDIITGGGGNDLFTFNEAPGLNGVDQLRDFNSTLDKLVFDKNVYAGLSGSTLT 1213
Query: 470 FSNFGCEEGRFVTFDSYL---YLGSYDDL 495
+ E G V + Y S DL
Sbjct: 1214 AAQLRAEAGATVATTASQRFIYNLSNGDL 1242
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 53/161 (32%), Gaps = 9/161 (5%)
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-- 231
+ G ++ + GA G++ TIY G D+L
Sbjct: 1039 GGTNGSDQFKGLAGDDCMWGDGGADTFWAGDD----NDFADGGEGHDTIYGENGFDMLRG 1094
Query: 232 ---DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ + GG N E S+ G + + + V G GND V G + N+
Sbjct: 1095 DAGNDQIYGGTGNDDMYGGEGNDSLFGEDGIDDLNGGNGNDLVSGGLGNDQVKGQAGNDT 1154
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
GND+ G G D F + L + + + D
Sbjct: 1155 LIGGQGNDIITGGGGNDLFTFNEAPGLNGVDQLRDFNSTLD 1195
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/366 (9%), Positives = 87/366 (23%), Gaps = 21/366 (5%)
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G +T++ + + + + + D + +
Sbjct: 920 RGDETYYLSKLAATDLVEEIKGKTVADMVMAATGVKHLYHKIFAVNDADYERSLQSFNTY 979
Query: 362 LE---YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ + ++ V G + L D+ + +
Sbjct: 980 SSEALLLGATQTVVDVTGTQRLVGRAGYVNGVLVGNGGNYLDARGVFSPNGEGKASELFG 1039
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ + + D + D + +
Sbjct: 1040 GTNGSDQFKGLAGDDCMWGDGGADTFWAGDDNDFADGGEGHDTIYGENGFDMLRG----- 1094
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
D DD+ G+D + G+ + + + ++ +
Sbjct: 1095 -DAGNDQIYGGTGNDDMYGGEGND-----SLFGEDGIDDLNGGNGNDLVSGGLGNDQVKG 1148
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ + G D G TFN L D L + + + G
Sbjct: 1149 QAGNDTLIGGQGND--IITGGGGNDLFTFNEAPGLNGVDQLRDFNSTLDKLVFDKNVYAG 1206
Query: 599 MKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSMH 658
+ ++ Q ++ + A ++ DL+ D G G + + +++
Sbjct: 1207 LS---GSTLTAAQLRAEAGATV--ATTASQRFIYNLSNGDLFFDPDGTGVLAVTQIANLN 1261
Query: 659 DINHDF 664
N F
Sbjct: 1262 RFNPAF 1267
>gi|284050793|ref|ZP_06381003.1| hypothetical protein AplaP_04894 [Arthrospira platensis str.
Paraca]
Length = 303
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 52/162 (32%), Gaps = 19/162 (11%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D T+ G L + S+ G N TI ++++G +GND++ GN +
Sbjct: 68 TDSAGETVRGTGAADRILGGDGPDSLLGGSNNDTIYGKAGSDTLLGEAGNDLLFGNQGRD 127
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ + +GND G DT + A L F N + D L
Sbjct: 128 LLYGGNGNDTLYGGQEADTLYGEAGDDLL----FGNLANDWLYGGDGNDTL--------- 174
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
K IL + L G D + F
Sbjct: 175 ------FGGKNDDILYGGDGNDLLSGDTGADTLIGGEGRDSF 210
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 53/165 (32%), Gaps = 12/165 (7%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
G N I + + ++ G I +S++G S ND + G + ++
Sbjct: 55 TLSSNGSVNEITVTDSAGETVRGTGAADRILGGDGPDSLLGGSNNDTIYGKAGSDTLLGE 114
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+GND+ G+ G D +Y +Y E + + L F + D
Sbjct: 115 AGNDLLFGNQGRD-----------LLYGGNGNDTLYGGQEADTLYGEAGDDLLFGNLAND 163
Query: 353 -SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
L + + L G D+ EGRD
Sbjct: 164 WLYGGDGNDTLFGGKNDDILYGGDGNDLLSGDTGADTLIGGEGRD 208
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
T+ G+DLL L GG N + ++ G + +
Sbjct: 97 SNNDTIYGKAGSDTLLGEAGNDLLFGNQGRDLLYGGNGNDTLYGGQEADTLYGEAGDDLL 156
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + + G GND + G +++ + GND+ G +G DT + +
Sbjct: 157 FGNLANDWLYGGDGNDTLFGGKNDDILYGGDGNDLLSGDTGADTLIGGEGRDSFVVSSLS 216
Query: 323 NAIIVYDA 330
+ + +A
Sbjct: 217 GGVNIREA 224
Score = 44.8 bits (104), Expect = 0.042, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 38/156 (24%)
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N I V D+ +R+ D + + A + L+ G D+
Sbjct: 63 NEITVTDSAGETVRGTGAADRILGGDGPDSLLGGSNNDTIYGKAGSDTLLGEAGNDLLFG 122
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ G D + Y + + A Y G
Sbjct: 123 NQGRDLLYGGNGNDTLYGGQEADTLYGEAGDDLLFGNLANDWLYGGDGNDTLFGGKNDDI 182
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
L ++ L + G+D F G
Sbjct: 183 LYGGDGNDLLSGDTGADTLIGGEGRDSFVVSSLSGG 218
>gi|226941651|ref|YP_002796725.1| outer membrane adhesin like proteiin [Laribacter hongkongensis HLHK9]
gi|226716578|gb|ACO75716.1| putative outer membrane adhesin like proteiin [Laribacter
hongkongensis HLHK9]
Length = 2392
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 8/155 (5%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D L GG N + + + G N + ++++G GNDV++G S
Sbjct: 2203 GDGNDRL----YGGEGNDVLMGMGGDDHLSGGAGNDVLFGGAGNDTLLGGHGNDVLLGGS 2258
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+ +GND+ G SG+DTF + + + + + + L
Sbjct: 2259 GNDTLTGGAGNDILIGGSGVDTFVWNLADAGTGSAPARDVVKDFHLTANG----EQGDIL 2314
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
F+D + + ++ +Y +D DV
Sbjct: 2315 DFSDLLQHAGDKSAATLDQYLDFRDDGHGNTVIDV 2349
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 64/294 (21%), Gaps = 45/294 (15%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN--MTIAQHTV 267
P I+ G+D++ + S+ I +H
Sbjct: 2039 NATFDAIPGSDIIHGGAGNDVIFGDSGFANLQAVIAAALGISADKLSAAQMLDYIQKHPD 2098
Query: 268 IESVVGSSGNDVVIGN-------SANNVFFESSGNDVFDGSSGLDTFFYYAP--SYLYKI 318
V SSG+ + G ++ SG+D G G D +
Sbjct: 2099 DFDVSKSSGDVTIDGKPTHVDQFDKGDILIGGSGHDTVYGQGGDDLLIGDGGHVGNQAGL 2158
Query: 319 YRFENAI-------------------------------IVYDANEHKQDFLSDVE---RL 344
+ ++ + A D L E L
Sbjct: 2159 DAYLGSLQGLLHAEGYSVEDLTQAIHSMSADALKDLAQELEGAAGDGNDRLYGGEGNDVL 2218
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
+L A + L+ G DV G DI
Sbjct: 2219 MGMGGDDHLSGGAGNDVLFGGAGNDTLLGGHGNDVLLGGSGNDTLTGGAGNDILIGGSGV 2278
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+L + A H G D + + D A D
Sbjct: 2279 DTFVWNLADAGTGSAPARDVVKDFHLTANGEQGDILDFSDLLQHAGDKSAATLD 2332
Score = 44.0 bits (102), Expect = 0.078, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 72/290 (24%), Gaps = 41/290 (14%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG--LDTFFYYAPSYLYKIYRFENAII 326
++ + + N +++ +GNDV G SG A + ++
Sbjct: 2031 DAALEAGKNATFDAIPGSDIIHGGAGNDVIFGDSGFANLQAVIAAALGISADKLSAAQML 2090
Query: 327 VYDAN-EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
Y D + + + IL + ++ + G D+
Sbjct: 2091 DYIQKHPDDFDVSKSSGDVTIDGKPTHVDQFDKGDILIGGSGHDTVYGQGGDDLLIGD-- 2148
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
G G D+ YLGS L + G + + ++
Sbjct: 2149 ----GGHVGNQAGLDA--YLGSLQGLLHAEGYSVEDLTQAIHSMSADALKDLAQELEGAA 2202
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
++ L + + G DH S + F
Sbjct: 2203 GDGNDRLYGGEGNDVLMGMGGDDHLSGGAGNDVLFGG----------------------- 2239
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G L + ++ L + + +G D F
Sbjct: 2240 -------AGNDTLLGGHGNDVLLGGSGNDTLTGGAGNDILIGGSGVDTFV 2282
>gi|221112764|ref|XP_002163814.1| PREDICTED: similar to matrix metalloproteinase [Hydra
magnipapillata]
Length = 316
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 52/149 (34%), Gaps = 19/149 (12%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFI 82
W+ + Y D++ + ++ R A WS V L F ETS DI
Sbjct: 90 WTKTTLTYSF-----RNKCEDLS--DGAVRQTIREAFKVWSDVTHLAFTETSGKGDITIG 142
Query: 83 SSNNGYVCTPRYDS-------RYFMEIN---FDKADVWRYGIGKGTILSHNALHEIGHAL 132
+N + +D YF FD+ + W GT L A+HEIGH L
Sbjct: 143 FHHNSHGDNSPFDGPGRVLAHAYFPPEGRLCFDEGERWVIKT-TGTDLFEIAIHEIGHIL 201
Query: 133 GLMHPG-SYNGGYPVYGVDNDYENDSFLT 160
GL H YP Y +
Sbjct: 202 GLEHSNIQGTIMYPSYSGYRPNLQLHYDD 230
>gi|119384399|ref|YP_915455.1| hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
gi|119374166|gb|ABL69759.1| Hemolysin-type calcium-binding region [Paracoccus denitrificans
PD1222]
Length = 260
Score = 68.3 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 55/204 (26%), Gaps = 34/204 (16%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ GG+D L + ++ G N +
Sbjct: 39 TFNDWLSGLGGHDQLSGFGGNDRL-------------HGGDGDDTLKGGNGNDELEGGRG 85
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G +G D + G + N+ + GND +G +G D + A + ++ I+
Sbjct: 86 NDRLYGGNGRDELEGGAGNDTLYGGDGNDELEGGAGADRLY--AGAGRDELEGGAGNDIL 143
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
Y + L + L G D+
Sbjct: 144 YGGA-----------------GNDELDGGSGNDRLNGGNGRDRLEGGRGNDILTGGAGAD 186
Query: 388 EFGL--SEGRDITFDSYLYLGSYD 409
F +GRD D + D
Sbjct: 187 VFEFERGDGRDTITDFQNGMDRLD 210
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 45/167 (26%), Gaps = 10/167 (5%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + T + G + ++ + + G G+D + G + N+ GND
Sbjct: 28 GTNFGDVLNGTTFNDWLSGLGGHDQLSGFGGNDRLHGGDGDDTLKGGNGNDELEGGRGND 87
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G +G D + +Y + + RL +
Sbjct: 88 RLYGGNGRD--ELEGGAGNDTLYGGDGNDELEGGAGAD--------RLYAGAGRDELEGG 137
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
IL A ++L G D G DI
Sbjct: 138 AGNDILYGGAGNDELDGGSGNDRLNGGNGRDRLEGGRGNDILTGGAG 184
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 51/140 (36%), Gaps = 6/140 (4%)
Query: 204 NNIYKIE--VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ +Y + + T+Y G+D L+ GG + G N
Sbjct: 87 DRLYGGNGRDELEGGAGNDTLYGGDGNDELE----GGAGADRLYAGAGRDELEGGAGNDI 142
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G SGND + G + + GND+ G +G D F + I F
Sbjct: 143 LYGGAGNDELDGGSGNDRLNGGNGRDRLEGGRGNDILTGGAGADVFEFERGDGRDTITDF 202
Query: 322 ENAIIVYDANEHKQDFLSDV 341
+N + D ++ + + +
Sbjct: 203 QNGMDRLDFDDFSRTQVQAI 222
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 50/172 (29%), Gaps = 14/172 (8%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S G T + T + +G++ DV+ G + N+ G+D G G D +
Sbjct: 6 SLRPGDPDADTQERTTDMVRKIGTNFGDVLNGTTFNDWLSGLGGHDQLSGFGGNDRL--H 63
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + +RL + + L ++
Sbjct: 64 GGDGDDTLKGGNGNDELEGG--------RGNDRLYGGNGRDELEGGAGNDTLYGGDGNDE 115
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
L G D + E G DI + D+L G+DR
Sbjct: 116 LEGGAGADRLYAGAGRDELEGGAGNDILYGGAG----NDELDGGSGNDRLNG 163
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 34/152 (22%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
L + L G D E + GRD
Sbjct: 48 GGHDQLSGFGGNDRLHGGDGDDTLKGGNGNDELEGGRGNDRLYGGNGRDELEGGAGNDTL 107
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
Y N A R Y G E L A +++L + G+
Sbjct: 108 YGGDGNDELEGGAGADRLYAGAGRDELEGGAGNDILYGGAGNDELDGGSGNDRLNGGNGR 167
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
D + + ++ D R+
Sbjct: 168 DRLEGGRGNDILTGGAGADVFEFERGDGRDTI 199
Score = 39.8 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 31/152 (20%), Gaps = 8/152 (5%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT----FDSYLYLGSYDD 410
L ++ L G D G D + LY G+ D
Sbjct: 37 GTTFNDWLSGLGGHDQLSGFGGNDRLHGGDGDDTLKGGNGNDELEGGRGNDRLYGGNGRD 96
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ Y G E L A ++L + G D
Sbjct: 97 ELEGGAGNDTL----YGGDGNDELEGGAGADRLYAGAGRDELEGGAGNDILYGGAGNDEL 152
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ G + G+
Sbjct: 153 DGGSGNDRLNGGNGRDRLEGGRGNDILTGGAG 184
>gi|126726453|ref|ZP_01742294.1| calcium binding hemolysin protein, putative [Rhodobacterales
bacterium HTCC2150]
gi|126704316|gb|EBA03408.1| calcium binding hemolysin protein, putative [Rhodobacterales
bacterium HTCC2150]
Length = 1097
Score = 68.3 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 64/275 (23%), Gaps = 10/275 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ IY GDD+L + I G I +
Sbjct: 63 TGDDTVNGDYGSDRIYGGSGDDVLFGGDVLTSNAPAQGTGGIDDQIWGGSGTDEIHGQSG 122
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G +DV+ G + D G +G DT S Y ++
Sbjct: 123 NDRLFGQRDSDVIYGQEGTDYVHGGLDTDQLFGGTGNDTL--DGGSQNDAAYGGFGTDLL 180
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
Y A+ L + R +L A + L D
Sbjct: 181 YGADGDD--------SLFGGTGNDAVLGGTGRDVLMGEAGADMLYGGADADALRGGTGND 232
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
EG D+ L + A + + G L+
Sbjct: 233 LLQGDEGDDLLRGEDGEDILNAGLGHDVAYGGTADDKINLHEGNDYAVGGAGEDTLDGGI 292
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
++ + L + EG T
Sbjct: 293 GNDVIYGDKLPDNLLAGEDTSVGLSVAQFEGADWT 327
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 79/282 (28%), Gaps = 10/282 (3%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + + +G+ S + D G G +
Sbjct: 775 VNGEAGQDLVFGGSGF-DHLFGGSGNDSLYGGEDTDEVNGGRGNDLAFGGFGADVVYGET 833
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G ++G + + + +MD + +
Sbjct: 834 GNDTLSGNEGADQLFGGAGRDQLFGDEGEDQLFGGSGNDVMDGGADADQLEGGNGNDVLD 893
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNT 247
GA + G + G DLL + L G N
Sbjct: 894 GGAGADQLDGG----SGNDTLSGKEGSDMLLGGRGKDLLQGGSGEDFLSGNSGNDELHGG 949
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
I G + N T+ +++ G +G D + G S +++ +G ++ G +G DTF
Sbjct: 950 SDNDQINGDQGNDTLHGDAGADTISGGAGKDTIFGGSGDDLIEAGAGQNMISGGAGADTF 1009
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+ + + + + A+ LS +E D
Sbjct: 1010 VFLSDNGSHHDTVLDFNCYGDSADSLDLTDLSLLESYESTDA 1051
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 51/412 (12%), Positives = 106/412 (25%), Gaps = 18/412 (4%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY-NGG 143
+G D G I + + L G
Sbjct: 43 GSGGSDLVSLGGDEDRAYAGTGDDTVNGDYGSDRIYGGSGDDVLFGGDVLTSNAPAQGTG 102
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ D + + D +G T V + +++G
Sbjct: 103 GIDDQIWGGSGTDEIHGQSGNDRLFGQRDSDVIYGQEGTDYVHGGLDTDQLFGGTGNDTL 162
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ +Y + GDD +L GG N L + G +
Sbjct: 163 DGG-SQNDAAYGGFGTDLLYGADGDD----SLFGGTGNDAVLGGTGRDVLMGEAGADMLY 217
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++ G +GND++ G+ +++ G D+ + G D + + KI E
Sbjct: 218 GGADADALRGGTGNDLLQGDEGDDLLRGEDGEDILNAGLGHDVAY--GGTADDKINLHEG 275
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS---YEDLIQVIGQDVF 380
+ + D+ D++ + + + + + D D
Sbjct: 276 NDYAVGGAGEDTLDGGIGNDVIYGDKLPDNLLAGEDTSVGLSVAQFEGADWTVTQDSDTG 335
Query: 381 ESM-------KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
++ + + +S F G+ + L N D+ E
Sbjct: 336 QTKMSQVIDTQSEKTYKVSIDVAANFAGGFTSGAIEVLWNDQVIDKIEVGSGEFRTLNYE 395
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ A A+ + D A + + G + F
Sbjct: 396 VQGFGADTAIAISTADPDSNAASIYDTSGPIYSYEKTVDLGDGDIMVSGFAP 447
>gi|83313155|ref|YP_423419.1| RTX toxins and related Ca2+-binding protein [Magnetospirillum
magneticum AMB-1]
gi|82947996|dbj|BAE52860.1| RTX toxins and related Ca2+-binding protein [Magnetospirillum
magneticum AMB-1]
Length = 1352
Score = 68.3 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/280 (16%), Positives = 81/280 (28%), Gaps = 12/280 (4%)
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G G T + S + + I A Q G
Sbjct: 582 DGSTASGDVVLVGGAQGATIIGGSGNDTLSGGAGADSFIGGSGNDVIYANQGDPLINGGI 641
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + D+ F T + + G +D +E ++ ++T
Sbjct: 642 GTDTLVITATTFDDNNFDDTHLQGIEVINITNASVAGQYFKVDNQSEGFTINVTSSAHVT 701
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T + + G S + + G N+ ++GND G +G D + + Y +
Sbjct: 702 VLGGTGNDVINGGSAGEYLWGYQGNDTITGNAGNDTIVGDAGADVAVFTGNAADYLLTTS 761
Query: 322 ENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ V D + D L+ +E L FAD +AS L +
Sbjct: 762 SGTLTVTDRSGTDGTDTLTGIETLTFADGS-----------FAVSASGTTLTALGASSTL 810
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
F E + G + L + + G D
Sbjct: 811 TVGSGFAEVIMGSGTNKLVTDMATLSAGLSILGGAGLDTV 850
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/369 (14%), Positives = 107/369 (28%), Gaps = 14/369 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + V ++ ++ G + + + A G
Sbjct: 733 AGNDTIVGDAGADVAVFTGNAADYLLTTSSGTLTVTDRSGTDGTDTLTGIETLTFADG-- 790
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G S +V S F + +S +++
Sbjct: 791 -----SFAVSASGTTLTALGASSTLTVGSGFAEVIMGSGTNKLVTDMATLSAGLSILGGA 845
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + + VQ I+T+ + +GG LN S+ G
Sbjct: 846 GLDTVVISDTASMGSVQMPALTGIETLTLASSITAAQSVYLGGQAESAGLNVVDASAATG 905
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + A + ++ G SGND + G + N+ G++ D +G DT Y S
Sbjct: 906 AVE-IHGAFRSDDLTLTGGSGNDTIHGAAGNDTLVGGGGSNTIDAGAGTDTVSY--GSMG 962
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID--SVNVKQRSILEYTASYEDL-I 372
I N + D +++ E LR + + ++ A + +
Sbjct: 963 SGITATLNGSSAVVTHSASTDTVTNTEILRGSGHDDVFFVASASVGVTVDGGAGVDTMDY 1022
Query: 373 QVIGQDVFESMKHF-YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+G + ++ + G D + ++GS D + S +
Sbjct: 1023 SAMGAGITATVTGTSASVVHAGGTDAITNVEAWVGSAHDDTFIGDSGGDTFFGGIGADHL 1082
Query: 432 KEGRNPDAF 440
G D F
Sbjct: 1083 TGGGGADTF 1091
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 42/301 (13%), Positives = 74/301 (24%), Gaps = 51/301 (16%)
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
++ L S +G V + + S + + +
Sbjct: 348 SIKLNSGHSDHGTAVVNADGSITFTATAGYSGAATITYTITDGHGGSVQGTAFSAVTVGT 407
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G G + TI DSGG D L ++ G I+L +
Sbjct: 408 QVTTAGTDHLDGGAGASAYLSSVANFTAGDTISDSGGLDTLTVSDAG----TINLAAGTV 463
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN-----VFFESSGNDVFDGSSGLD 305
T IE + ++G + VI N +G DV + G
Sbjct: 464 ---------------TGIEILTLAAGGNTVILGGGVNPQQFTTIVGGAGTDVIKQADGGG 508
Query: 306 TFFYYA----PSYLYKIYRFENAIIVYDANEHKQDFLSD--------VERLRFADQCIDS 353
TF ++I + + + + D V + ++
Sbjct: 509 TFDLTGIVLTSVESIATGTGTSSITFDEVSAAGVNTVVDAVSGDGDSVTFYQTTAGTLNI 568
Query: 354 ---------------VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+L A +I G D F G D+
Sbjct: 569 SAKTFVNIEGIILDGSTASGDVVLVGGAQGATIIGGSGNDTLSGGAGADSFIGGSGNDVI 628
Query: 399 F 399
+
Sbjct: 629 Y 629
>gi|297698857|ref|XP_002826519.1| PREDICTED: matrix metalloproteinase-15-like [Pongo abelii]
Length = 669
Score = 68.3 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 48/162 (29%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + W+N+ + + T + E R A W + L F+E
Sbjct: 134 LTGRKWNNHHLTFSIQNYTEKLGWYHS-------MEAVRRAFRVWEQATPLVFQEVPYED 186
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+ +
Sbjct: 187 IRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSST 246
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + N + D +N
Sbjct: 247 DLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDN 288
>gi|219518916|gb|AAI43774.1| Matrix metallopeptidase 12 (macrophage elastase) [Homo sapiens]
Length = 470
Score = 68.3 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 67/193 (34%), Gaps = 47/193 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W ++I Y+ + T D+ R A WS V L F + + +DI
Sbjct: 109 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 161
Query: 82 ISSNNGYVCTPRY-------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + + + S + +FD+ + W G GT L A+HEI
Sbjct: 162 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H P + Y+ T +S DI
Sbjct: 221 GHSLGLGHS-----SDPKAVMFPTYKYVDINTFRLS--------------------ADDI 255
Query: 189 VAVQKIYGAPKGS 201
+Q +YG PK +
Sbjct: 256 RGIQSLYGDPKEN 268
>gi|4505211|ref|NP_002419.1| matrix metalloproteinase-15 preproprotein [Homo sapiens]
gi|1705988|sp|P51511|MMP15_HUMAN RecName: Full=Matrix metalloproteinase-15; Short=MMP-15; AltName:
Full=Membrane-type matrix metalloproteinase 2;
Short=MT-MMP 2; Short=MTMMP2; AltName:
Full=Membrane-type-2 matrix metalloproteinase;
Short=MT2-MMP; Short=MT2MMP; AltName: Full=SMCP-2;
Flags: Precursor
gi|963056|emb|CAA88373.1| membrane-type matrix metalloproteinase 2 [Homo sapiens]
gi|33585869|gb|AAH55428.1| Matrix metallopeptidase 15 (membrane-inserted) [Homo sapiens]
gi|54673588|gb|AAH36495.1| Matrix metallopeptidase 15 (membrane-inserted) [Homo sapiens]
gi|116069818|gb|ABJ53423.1| matrix metallopeptidase 15 (membrane-inserted) [Homo sapiens]
gi|119603371|gb|EAW82965.1| matrix metallopeptidase 15 (membrane-inserted), isoform CRA_a [Homo
sapiens]
gi|119603372|gb|EAW82966.1| matrix metallopeptidase 15 (membrane-inserted), isoform CRA_a [Homo
sapiens]
gi|261858710|dbj|BAI45877.1| matrix metallopeptidase 15 [synthetic construct]
Length = 669
Score = 68.3 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 48/162 (29%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + W+N+ + + T + E R A W + L F+E
Sbjct: 134 LTGRKWNNHHLTFSIQNYTEKLGWYHS-------MEAVRRAFRVWEQATPLVFQEVPYED 186
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+ +
Sbjct: 187 IRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSST 246
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + N + D +N
Sbjct: 247 DLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDN 288
>gi|281341735|gb|EFB17319.1| hypothetical protein PANDA_011007 [Ailuropoda melanoleuca]
Length = 407
Score = 68.3 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 64/194 (32%), Gaps = 49/194 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEETSIH-SDIK 80
W FI Y+ + T + P + + A WS V L F + + +DI
Sbjct: 78 WKKRFITYRINNYTPD--------MRPADVDYAIQKAFQVWSDVTPLKFRKINSGEADIM 129
Query: 81 FISSNNGYVCTPRY-------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
++ + + + +FD+A++W KGT L A+HE
Sbjct: 130 IRFASGAHGDFTPFDGRGGVIAHAFGPGPGIGGDTHFDEAEIWTKNY-KGTNLFLVAVHE 188
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H + SY P D
Sbjct: 189 LGHSLGLSHSSDPKA---------------IMFPTYSYVDPNT----------FRLSADD 223
Query: 188 IVAVQKIYGAPKGS 201
+ +Q +YG P+
Sbjct: 224 VRGIQSLYGRPERH 237
>gi|148683759|gb|EDL15706.1| matrix metallopeptidase 28 (epilysin), isoform CRA_c [Mus musculus]
Length = 529
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 52/169 (30%), Gaps = 42/169 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 182 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHA 241
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD + W +G L HEIGH LGL H P P Y
Sbjct: 242 FLPRRGEAHFDGDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRD 301
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+ D++AVQ +YG P G
Sbjct: 302 ALLSWD---------------------------DVLAVQSLYGKPLGRS 323
>gi|30348964|ref|NP_766385.1| matrix metalloproteinase-28 isoform 2 [Mus musculus]
gi|26341830|dbj|BAC34577.1| unnamed protein product [Mus musculus]
gi|27461084|gb|AAL57762.1| matrix metalloproteinase-28 variant B precursor [Mus musculus]
gi|56207070|emb|CAI24739.1| matrix metalloproteinase 28 (epilysin) [Mus musculus]
gi|223459846|gb|AAI37922.1| Matrix metallopeptidase 28 (epilysin) [Mus musculus]
Length = 496
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 52/169 (30%), Gaps = 42/169 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHA 208
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD + W +G L HEIGH LGL H P P Y
Sbjct: 209 FLPRRGEAHFDGDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRD 268
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+ D++AVQ +YG P G
Sbjct: 269 ALLSWD---------------------------DVLAVQSLYGKPLGRS 290
>gi|326669661|ref|XP_002662954.2| PREDICTED: matrix metalloproteinase-15-like [Danio rerio]
Length = 655
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 46/162 (28%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L W I + T ++ E R A W KV LTF+E
Sbjct: 118 LTGHKWDKTHITFSIQNYTPKIGEYNSYE-------AIRRAFRVWEKVTPLTFDEIPFHE 170
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+
Sbjct: 171 VKYGRRKEPDIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGMGGDTHFDSDEPWTIGSQ 230
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+G L A+HE+GHALGL H + + D EN
Sbjct: 231 NLQGNDLFLVAVHELGHALGLEHSNNPLAIMAPFYQWMDTEN 272
>gi|254417324|ref|ZP_05031067.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196175862|gb|EDX70883.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 288
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/252 (17%), Positives = 77/252 (30%), Gaps = 13/252 (5%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L G + + E + I + I + +++ GND + N NV
Sbjct: 10 DDWLEGTSSDDVIFGGEGINRIIAIYGDNLIYGGSAADTITAGDGNDTIYANEGLNVIDA 69
Query: 292 SSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
GN++ G S DT YA L I + ++Y + +
Sbjct: 70 GDGNNLIYGGSAADTIRAGNGNDTIYANEGLNVIDAGDGNNLIYGGSAADTIKAGNGNDT 129
Query: 345 RFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+A++ ++ ++ +++ + + + G D + + +G DI
Sbjct: 130 IYANEGVNIIDAGDGDNLIYSGSGNDTITTGSGDDTIYAGEGVNTISTGDGNDII----- 184
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
Y GS DDL N E DL + L+
Sbjct: 185 YSGSGDDLINAGRGQNQIWLGGGQDTISLEMWGSSEINNFNPYQDQIDLGLSNLSGVVLI 244
Query: 464 QVGKDHFSNFGC 475
G D G
Sbjct: 245 GQGNDTMIGLGN 256
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 71/207 (34%), Gaps = 13/207 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ I G + + + + + G G + +I +N+ + S D G DT +
Sbjct: 2 NYIFGTVGDDWLEGTSSDDVIFGGEGINRIIAIYGDNLIYGGSAADTITAGDGNDTIY-- 59
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYE 369
A L I + ++Y + + +A++ ++ ++ +++ ++ +
Sbjct: 60 ANEGLNVIDAGDGNNLIYGGSAADTIRAGNGNDTIYANEGLNVIDAGDGNNLIYGGSAAD 119
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D + + +G ++ + D + G D A
Sbjct: 120 TIKAGNGNDTIYANEGVNIIDAGDGDNLIYSGSG----NDTITTGSGDDTIYAGEG---- 171
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAF 456
+ + Y S +DLINA
Sbjct: 172 --VNTISTGDGNDIIYSGSGDDLINAG 196
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 65/201 (32%), Gaps = 4/201 (1%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+G+ +++ I G D G + I N + I +
Sbjct: 14 EGTSSDDVIFGGEGINRIIAIYGDNLIYGGSAADTITAGDGNDTIYANEG-LNVIDAGDG 72
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I + +++ +GND + N NV GN++ G S DT A + I
Sbjct: 73 NNLIYGGSAADTIRAGNGNDTIYANEGLNVIDAGDGNNLIYGGSAADTI--KAGNGNDTI 130
Query: 319 YRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
Y E I+ + + S + + + + + + + G
Sbjct: 131 YANEGVNIIDAGDGDNLIYSGSGNDTITTGSGDDTIYAGEGVNTISTGDGNDIIYSGSGD 190
Query: 378 DVFESMKHFYEFGLSEGRDIT 398
D+ + + + L G+D
Sbjct: 191 DLINAGRGQNQIWLGGGQDTI 211
>gi|153826862|ref|ZP_01979529.1| RTX toxin RtxA [Vibrio cholerae MZO-2]
gi|149739325|gb|EDM53577.1| RTX toxin RtxA [Vibrio cholerae MZO-2]
Length = 4558
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 57/220 (25%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4181 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI 4240
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F G+D + G G DT A + + + D S
Sbjct: 4241 FTGGEGHDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4299
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ G D+
Sbjct: 4300 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNYNRINAGAGNDVVK 4359
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N D A G
Sbjct: 4360 -----LMGYHAVLNGGDGDDHLIAAAISKFSQFNGGEGCD 4394
Score = 38.6 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 64/265 (24%), Gaps = 33/265 (12%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ Y A ++IVA+ G Y + T+Y G+D +
Sbjct: 26 FTGNYSADDGNNNIVAIGF--GGQIH-----AYGGDDHVTVGSIGATVYTGSGNDTVVGG 78
Query: 235 L------IGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSA 285
+ + N++ A I+ + G+ G+ G +A
Sbjct: 79 SAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHL-GNHGDVSYGGAAA 137
Query: 286 NNVFF--ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N SGN F G+ G + + + ++
Sbjct: 138 YNGITRKGLSGNVTFAGAGGYNALLHETNQGNLSFTGAGAGNKLDRTWSNRYQGSHGDVT 197
Query: 344 LRFADQCIDSVN--VKQRSILEYTASYEDLI------------QVIGQDVFESMKHFYEF 389
A + + L+ + + + +
Sbjct: 198 FDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTHQAEDVY 257
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNV 414
+ G Y Y D+ +
Sbjct: 258 TQTRGNIRFEGVGGYNSLYSDVAHG 282
Score = 37.8 bits (86), Expect = 5.5, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 57/193 (29%), Gaps = 25/193 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNM--- 260
+ I ++ GDD + GG + + +++ + +
Sbjct: 4264 GNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSV 4323
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYA 311
TI + +E +GND N +GNDV +G G D A
Sbjct: 4324 TIGNNNQVE---LGAGNDFANVFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIAAA 4380
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID----SVNVKQRSILEYTA 366
S + E ++ +DV+ + ID + + +
Sbjct: 4381 ISKFSQFNGGEGCDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGID 4440
Query: 367 SYEDLIQVIGQDV 379
+ + G D+
Sbjct: 4441 WQKLWFERSGYDL 4453
Score = 37.5 bits (85), Expect = 8.3, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 37/145 (25%), Gaps = 10/145 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + N + +G G + ++ S SG DT
Sbjct: 21 SVEYFFTGNYSADDGNNNIVAIGFGG--QIHAYGGDDHVTVGSIGATVYTGSGNDTVV-- 76
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTA 366
S K+ +IV A + S + FA ID + A
Sbjct: 77 GGSAYLKVEDSTGHLIVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGAA 136
Query: 367 SYE--DLIQVIGQDVFESMKHFYEF 389
+Y + G F +
Sbjct: 137 AYNGITRKGLSGNVTFAGAGGYNAL 161
>gi|73955222|ref|XP_854594.1| PREDICTED: similar to Macrophage metalloelastase precursor (HME)
(Matrix metalloproteinase-12) (MMP-12) (Macrophage
elastase) (ME) [Canis familiaris]
Length = 601
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/225 (19%), Positives = 75/225 (33%), Gaps = 50/225 (22%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEETSIH-SDIK 80
W + I Y+ + T + P + A WS V L F + + +DI
Sbjct: 241 WKKHLITYRINNYTPD--------MQPADVDYAIHKAFEVWSNVTPLKFRKVNSGEADIM 292
Query: 81 FISSNNGYVCTPRY-------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ ++ + + + +++FD+A++W KGT L A+HE
Sbjct: 293 ILFASRAHGDFSPFDGRGGVIAHAFGPGPQIGGDMHFDEAEIWTKTY-KGTNLFLVAVHE 351
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H + SY P D
Sbjct: 352 LGHSLGLGHSSDPKA---------------IMFPTYSYVNPNTFH----------LSADD 386
Query: 188 IVAVQKIYGAPKGS-LGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
I +Q +YG P+ +N E DS + G+ +
Sbjct: 387 IHGIQSLYGGPEKHQFSSNTDGTESANCDSNLSFDAVTTVGNKIF 431
>gi|261379743|ref|ZP_05984316.1| putative type I secretion target GGXGXDXXX repeat-containing domain
protein [Neisseria subflava NJ9703]
gi|284797419|gb|EFC52766.1| putative type I secretion target GGXGXDXXX repeat-containing domain
protein [Neisseria subflava NJ9703]
Length = 912
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 90/277 (32%), Gaps = 34/277 (12%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ G++ ++ +N ++ ++ G N + + + G GND++ G++
Sbjct: 342 AAGNNSNNILTGNEGRNRLNSGRG-DDTVYGMGGNDNLNGGDGNDYLDGGDGNDLINGDA 400
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYY-------------------------------APS 313
N++ +G D+ G +G DT+ Y
Sbjct: 401 GNDILMGGNGKDILKGGAGNDTYIYGDNDTIIDNQGINTLKFSDGLNNAKLNLKTIHNDD 460
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ N+ D ++R +F+DQ + +Q A + +
Sbjct: 461 GSQSWEITSDQGSALIQNQIGADGSISIDRFQFSDQTYTAAQFQQAFQ-ALKAKNINFVG 519
Query: 374 VIGQDVFESMKHFYEF-GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D E G ++GRDI + + +G++ + + Y +G
Sbjct: 520 TNGDDTLHGNAGNNEIDGGNDGRDILYGHDGDDILREHSETYYGNEPASDDKLYGGNGND 579
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ L+ A ++ L + + G H
Sbjct: 580 KLYAHVGTDLLDGGAGNDYLEGGEHNDTYVFGKGYGH 616
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 51/407 (12%), Positives = 102/407 (25%), Gaps = 83/407 (20%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ +Y + + ++ G N I + E + +
Sbjct: 52 NPNGGDDTVYSNVSYTLPNHVENLVLTG----TANIFGAGNNSNNILIGNEGRNRLNSGC 107
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + + + G GND + G + N+ +GNDV +G G DT+ + A S
Sbjct: 108 GDDIVYGGGGNDFINGGEGNDCLFGETGNDTLNGEAGNDVLEGGEGDDTYLFSAKSEQDT 167
Query: 318 IYRFENAIIVYDANE---------------HKQDFLSDVERLRFADQCIDSVNVKQRS-- 360
I + + + QD+L V+ + +
Sbjct: 168 IIDNQGHNSIRFHTDLSLNDLTVEARNNETGGQDWLIAVKNSNAVLTIKNQYTQNGTTPA 227
Query: 361 --------------------------------ILEYTASYEDLIQVIGQDVFESMKHFYE 388
++ + + LI G D+ +
Sbjct: 228 VSQFIIGTQKLDVNSFAKYFDISLTEYTESGKTIDGSDGNDHLIGTSGDDIIDGKAGADI 287
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+G D Y+ + D+ I+H +
Sbjct: 288 MEGRDGNDT-----YYVDNTKDVVIEQAGGGEDTVFSSISHTAA-------THVENVTLT 335
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
I A + + + G + + G D +Y +D N
Sbjct: 336 GSANIFAAGNNSNNILTGNEGRNRLNSGRG-----DDTVYGMGGNDNLN----------- 379
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G D + A ++ L+ AG D +
Sbjct: 380 --GGDGNDYLDGGDGNDLINGDAGNDILMGGNGKDILKGGAGNDTYI 424
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 75/248 (30%), Gaps = 5/248 (2%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D D+ + + + D+ + G G T + + I G+
Sbjct: 380 GGDGNDYLDGGDGNDLINGDAGNDILMGGNGKDILKGGAGNDTYIYGD-NDTIIDNQGIN 438
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+G ND S +++ G + + + Y
Sbjct: 439 TLKFSDGLNNAKLNLKTIHNDDGSQSWEITSDQGSALIQNQIGADGSISIDRFQFSDQTY 498
Query: 196 GAPKGSLGNNIYKI-EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
A + K + + T++ + G++ +D G I + +
Sbjct: 499 TAAQFQQAFQALKAKNINFVGTNGDDTLHGNAGNNEID---GGNDGRDILYGHDGDDILR 555
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ + + + + G +GND + + ++ +GND +G DT+ +
Sbjct: 556 EHSETYYGNEPASDDKLYGGNGNDKLYAHVGTDLLDGGAGNDYLEGGEHNDTYVFGKGYG 615
Query: 315 LYKIYRFE 322
I+ +
Sbjct: 616 HDTIFDYN 623
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 62/522 (11%), Positives = 125/522 (23%), Gaps = 58/522 (11%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH------NALH 126
FI+ G C ++ DV G G T L +
Sbjct: 112 VYGGGGNDFINGGEGNDCL-FGETGNDTLNGEAGNDVLEGGEGDDTYLFSAKSEQDTIID 170
Query: 127 EIGHA-------LGLMHPGSYNGGYPVYGVDNDYE---NDSFLTSVMSYFMPQDSMMDAS 176
GH L L G D +++ LT Y + +
Sbjct: 171 NQGHNSIRFHTDLSLNDLTVEARNNETGGQDWLIAVKNSNAVLTIKNQYTQNGTTPAVSQ 230
Query: 177 F-------GYCATPMVSDIVAVQKIYGAPKGSLGNNI-----YKIEVQQKDSPFIQTIYD 224
F + DI + + + +
Sbjct: 231 FIIGTQKLDVNSFAKYFDISLTEYTESGKTIDGSDGNDHLIGTSGDDIIDGKAGADIMEG 290
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIG--------GYEKNMTIAQHTVIESVVGSSG 276
G+D + I+ ++ + +N+T+ I G++
Sbjct: 291 RDGNDTYYVDN--TKDVVIEQAGGGEDTVFSSISHTAATHVENVTLTGSANIF-AAGNNS 347
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
N+++ GN N G+D G G D + + ++ + D
Sbjct: 348 NNILTGNEGRNRLNSGRGDDTVYGMGGNDNL--NGGDGNDYLDGGDGNDLI--NGDAGND 403
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
L + Y + +I G + + L+
Sbjct: 404 ILMG------GNGKDILKGGAGNDTYIYGD-NDTIIDNQGINTLKFSDGLNNAKLNLKTI 456
Query: 397 ITFDSYLYLGSYDD-----LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
D D ++N G+D + + A + +
Sbjct: 457 HNDDGSQSWEITSDQGSALIQNQIGADGSISIDRFQFSDQTYTAAQFQQAFQALKAKNIN 516
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI 511
+ D G + D L + + +G++ + + Y
Sbjct: 517 FVGTNGDDTLHGNAGNNEIDGGNDGRDILYGHDGDDILREHSETY--YGNEPASDDKLYG 574
Query: 512 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+G + L+ A ++ L + + G H
Sbjct: 575 GNGNDKLYAHVGTDLLDGGAGNDYLEGGEHNDTYVFGKGYGH 616
Score = 47.1 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 82/625 (13%), Positives = 160/625 (25%), Gaps = 73/625 (11%)
Query: 57 WALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK 116
S E ++ ++ N + + D G
Sbjct: 316 TVFSSISHTAATHVENVTLTGSANIFAAGNNSNNILTGNEGRNRLNSGRGDDTVYGMGGN 375
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
+ + + G G + G + + + D+++D
Sbjct: 376 DNLNGGDGNDYLDGGDGNDLINGDAGNDILMGGNGKDILKGGAGNDTYIYGDNDTIIDNQ 435
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
T SD + K+ + + + S IQ + G +D
Sbjct: 436 G--INTLKFSDGLNNAKLNLKTIHNDDGSQSWEITSDQGSALIQNQIGADGSISIDRFQF 493
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES-SGN 295
+++ ++ N VG++G+D + GN+ NN G
Sbjct: 494 SDQTYTAAQFQQAFQALKAKNINF-----------VGTNGDDTLHGNAGNNEIDGGNDGR 542
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D+ G G D E++ Y D L
Sbjct: 543 DILYGHDGDDILR-------------EHSETYYGNEPASDDKL---------------YG 574
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLRN 413
L + L G D E +H FG G D FD S L +
Sbjct: 575 GNGNDKLYAHVGTDLLDGGAGNDYLEGGEHNDTYVFGKGYGHDTIFDYNFGFDSEASL-H 633
Query: 414 VFGSDRGAAARHYITH----GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
++ V++G + + D + G D
Sbjct: 634 RLNANVVKFTGGITLDDLEITVEKGYDKTGIADIPDSNQFVSPPLLDGDTWHIRIKGTDD 693
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
+ G + + + G+ + + H I + + L
Sbjct: 694 VLTIKNQSGIYGAISEFQFDGNTSYSTGELINHFKLSIPHMIGNKNIVQYTGQPVEELN- 752
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSA 589
+ + + D H+++ E R + + L ++ + G + +
Sbjct: 753 RDVYNNFNHTIHADSDNSDLDLSHYTS--VVEYRGNRSDETITLGRGINIVDTAGGNDTI 810
Query: 590 ----AAQHYITHGMKEG-----------------RALGISGMQFKSVMNLSEKSRDKADL 628
A I G G L + +Q K+ + +D D
Sbjct: 811 TDPGADNTVIMFGRNSGNDTFNPYGGSDTQVLFKEGLTLKDLQLKTGDDWVLTIKDTGDT 870
Query: 629 SLSFDHKKVDLYTDYFGDGNYYDSD 653
D ++ + FG+G Y +D
Sbjct: 871 LTIHDIANNNVDSFVFGNGKSYTAD 895
>gi|435970|gb|AAA58658.1| metalloproteinase [Homo sapiens]
Length = 470
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 67/193 (34%), Gaps = 47/193 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W ++I Y+ + T D+ R A WS V L F + + +DI
Sbjct: 109 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 161
Query: 82 ISSNNGYVCTPRY-------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + + + S + +FD+ + W G GT L A+HEI
Sbjct: 162 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H P + Y+ T +S DI
Sbjct: 221 GHSLGLGHS-----SDPKAVMFPTYKYVDINTFRLS--------------------ADDI 255
Query: 189 VAVQKIYGAPKGS 201
+Q +YG PK +
Sbjct: 256 RGIQSLYGDPKEN 268
>gi|73858572|ref|NP_002417.2| macrophage metalloelastase preproprotein [Homo sapiens]
gi|729179|sp|P39900|MMP12_HUMAN RecName: Full=Macrophage metalloelastase; Short=MME; AltName:
Full=Macrophage elastase; Short=ME; Short=hME; AltName:
Full=Matrix metalloproteinase-12; Short=MMP-12; Flags:
Precursor
gi|56788330|gb|AAW29944.1| matrix metalloproteinase 12 (macrophage elastase) [Homo sapiens]
gi|85567332|gb|AAI12302.1| Matrix metalloproteinase 12, preproprotein [Homo sapiens]
gi|119587437|gb|EAW67033.1| matrix metallopeptidase 12 (macrophage elastase) [Homo sapiens]
gi|189054155|dbj|BAG36675.1| unnamed protein product [Homo sapiens]
gi|307685507|dbj|BAJ20684.1| matrix metallopeptidase 12 [synthetic construct]
gi|313883062|gb|ADR83017.1| matrix metallopeptidase 12 (macrophage elastase) [synthetic
construct]
Length = 470
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 67/193 (34%), Gaps = 47/193 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W ++I Y+ + T D+ R A WS V L F + + +DI
Sbjct: 109 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 161
Query: 82 ISSNNGYVCTPRY-------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + + + S + +FD+ + W G GT L A+HEI
Sbjct: 162 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H P + Y+ T +S DI
Sbjct: 221 GHSLGLGHS-----SDPKAVMFPTYKYVDINTFRLS--------------------ADDI 255
Query: 189 VAVQKIYGAPKGS 201
+Q +YG PK +
Sbjct: 256 RGIQSLYGDPKEN 268
>gi|260221989|emb|CBA31104.1| hypothetical protein Csp_C26880 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 499
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 73/271 (26%), Gaps = 12/271 (4%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
GG N + G N T+ +++ G +GNDV+ G + N++ +G
Sbjct: 192 DGGTGNDTLTGGAGRDYLMGGNGNDTLNGGDAADTLEGGAGNDVLNGGTGNDLLIGGAGT 251
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-------SDVERLR-FA 347
D G G D + V + + L +++E L +
Sbjct: 252 DTLTGGVGDDFYRLSDTLDTIVEAAGSGTDTVQLDSTYVSTNLSTTYVLATNLENLVAYD 311
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----TFDSYL 403
I+ + LE ++ + + G D K G D D
Sbjct: 312 GGAINLTGNASANRLEGNSAANTISGLDGNDFIVGGKGNDILTGGTGSDTFAWRLNDGGT 371
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
D F G + V + R + S +
Sbjct: 372 AGSPAVDHVTDFNYGGGYSNVSLSGGDVLDLRELLVGEHTSSGNSGSAATDVAISNLLNY 431
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ +N F Y + +D
Sbjct: 432 IDININGANTEIRISSTGGFAGGTYSAAAED 462
>gi|291087214|ref|ZP_06345741.2| conserved hypothetical protein [Clostridium sp. M62/1]
gi|291076001|gb|EFE13365.1| conserved hypothetical protein [Clostridium sp. M62/1]
Length = 234
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
FD+ Y +DL FG ++ H++T G+KEGR AF Y ++ DL+ AF
Sbjct: 153 FDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQAFG 212
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
D A +H+ NFGY+E R
Sbjct: 213 DNL---PAYYEHYMNFGYDENR 231
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F A+ Y +EDL AF + + +HF G +EGR + FN +Y + DL
Sbjct: 153 FDAVYYADHNEDLYGAFGYNQEDL---LNHFLTSGMKEGRVASEAFNISVYKENNADLVQ 209
Query: 582 VFGSDRSAAAQHYITHGMKEGR 603
FG + A +HY+ G E R
Sbjct: 210 AFGDNLPAYYEHYMNFGYDENR 231
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFG 416
+ Y EDL G + + + HF G+ EGR F+ +Y + DL FG
Sbjct: 153 FDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQAFG 212
Query: 417 SDRGAAARHYITHGVKEGR 435
+ A HY+ G E R
Sbjct: 213 DNLPAYYEHYMNFGYDENR 231
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
F A+ Y +EDL AF + +HF G +EGR + F+ +Y +
Sbjct: 148 HIDRIFDAVYYADHNEDLYGAFG---YNQEDLLNHFLTSGMKEGRVASEAFNISVYKENN 204
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGR 519
DL FG + A HY+ G E R
Sbjct: 205 ADLVQAFGDNLPAYYEHYMNFGYDENR 231
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLIN 454
D FD+ Y +DL FG ++ H++T G+KEGR +AF Y ++ DL+
Sbjct: 150 DRIFDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQ 209
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGR 479
AF D +H+ NFG +E R
Sbjct: 210 AFGDNLPAY---YEHYMNFGYDENR 231
Score = 44.4 bits (103), Expect = 0.059, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
F+ Y +DL+ FG ++ H++T GMKEGR
Sbjct: 152 IFDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVAS 192
>gi|110678852|ref|YP_681859.1| iron-regulated protein FrpC, putative [Roseobacter denitrificans OCh
114]
gi|109454968|gb|ABG31173.1| iron-regulated protein FrpC, putative [Roseobacter denitrificans OCh
114]
Length = 1138
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 72/539 (13%), Positives = 129/539 (23%), Gaps = 46/539 (8%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ FE + S I +G + D G G I +
Sbjct: 502 INFENVNTGSGDNTIVGTSG-ANVIDGGAGNDDINGGGGNDTIFGGDGNDVIDGGFGTDD 560
Query: 128 I--GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+ G L+ S G G D ++ + + + + M+
Sbjct: 561 VFGGAGDDLLLLVSGAGSDNFDGGAGTDTVDFTGVNLDTTIDLDAGIWNFTGFAPNFDMI 620
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
V + G G++ TI GDD + G +
Sbjct: 621 --DVENVILSGGDDVVTGSSA---ANVITTGGGNDTIDGGAGDDTI--FAGAGNDTVFNA 673
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN-NVFFESSGNDVFDGSSGL 304
N +++ G + + TI + ++V G +G+D + G D + +
Sbjct: 674 NFSGANTVFGGDGDDTI-TSSGEDTVFGEAGDDTIFAGLGVLENLDGGDGEDTLNTTLFN 732
Query: 305 DTFFYYAPSY------------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+ + I + + A E++ +R+ D D
Sbjct: 733 GAYVVNLATGLTNFAGEVFTNFENIISGNGSDELFGTAGENEMTGGGGNDRILGFDGDDD 792
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
IL +DL G D+ E +G D+ + L
Sbjct: 793 LFGGLGNDILNGGNGNDDLEGGDGNDIMYGGAGNDEMEGGDGDDLLIGNDGNDRMEGGLG 852
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
N G E D L ++ + + D G D
Sbjct: 853 NDMFRGGTGVDIIDGDEGDDEAFGGDGNDILRGGDGNDLMDGSAGDDSIQGGEGDDILVG 912
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD---------- 522
+ + G + G+ + G D
Sbjct: 913 QIGSDILQGDNGADELRGGGGNDVLNGGTGNDTLFGGANEDTLFGGTGDDFLQGNQQDDD 972
Query: 523 -----AFKALEYIASHEDLINAFADAPDLVQAGKDHF-------SNFGYEEGRSITFNP 569
L + L D G+D G G + FN
Sbjct: 973 LFGQSGNDRLFGGDGFDFLDGGIGDDRLEGNNGRDTLVGGTGADILIGGALGDTFRFNS 1031
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/263 (16%), Positives = 77/263 (29%), Gaps = 12/263 (4%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
GG N I + + G + +I + +VG G+D++ G++ + GN
Sbjct: 875 FGGDGNDILRGGDGNDLMDGSAGDDSIQGGEGDDILVGQIGSDILQGDNGADELRGGGGN 934
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSV 354
DV +G +G DT F + ++ + + F S +RL D
Sbjct: 935 DVLNGGTGNDTLF--GGANEDTLFGGTGDDFLQGNQQDDDLFGQSGNDRLFGGDGFDFLD 992
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE-------GRDITFDSYLYLGS 407
LE + L+ G D+ F + RD +
Sbjct: 993 GGIGDDRLEGNNGRDTLVGGTGADILIGGALGDTFRFNSVADSNLASRDTIVGIDGIGVA 1052
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
D+ +V D + AL + A + NA +
Sbjct: 1053 NGDVIDVSAIDADTTVGGNQAFTFLGLQ--TTASALSFGAGALWVENAGGPTLLFGNIDN 1110
Query: 468 DHFSNFGCEEGRFVTFDSYLYLG 490
D F + + Y
Sbjct: 1111 DATIEFAVQINDGAGTSAADYTL 1133
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 60/440 (13%), Positives = 115/440 (26%), Gaps = 25/440 (5%)
Query: 134 LMHPGSYNGGYPVYGVDN-DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
L H + N G +DS V + Y I A
Sbjct: 392 LAHILNSNVITTGTGNTTVLAASDSEDYFVFGQGGNDTINSNGFGEYLGGAGNDTIRAGA 451
Query: 193 KIYGAPKGSLGNNIYKIEV-QQKDSPFIQTIYDSGGDDLLDLTLIGGVK--NYIDLNTE- 248
G + L + + I + G + ++ N+ ++NT
Sbjct: 452 GTNGTGRSELLDGGVGTDTLDLTGQAGAYDINLATGVTTFNGAVVTEESFINFENVNTGS 511
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++I G I + + G GND + G N+V G D G +G D
Sbjct: 512 GDNTIVGTSGANVIDGGAGNDDINGGGGNDTIFGGDGNDVIDGGFGTDDVFGGAGDDLLL 571
Query: 309 YYAPSYLYKIYRFENAIIVYDAN---EHKQDFLSDVERLRFADQCIDSVN------VKQR 359
+ + V + D + + D ++
Sbjct: 572 LVSGAGSDNFDGGAGTDTVDFTGVNLDTTIDLDAGIWNFTGFAPNFDMIDVENVILSGGD 631
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
++ +++ + G D + G D F++ + + G D
Sbjct: 632 DVVTGSSAANVITTGGGNDTIDGGAGDDTIFAGAGNDTVFNANFSGAN--TVFGGDGDDT 689
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
++ G E + F L + + + L G
Sbjct: 690 ITSSGEDTVFG--EAGDDTIFAGLGVLENLDGGDGEDTLNTTLFNGAYVVNLATGLTNFA 747
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-------FKALEYIAS 532
F ++ + S + +FG+ + G + D L
Sbjct: 748 GEVFTNFENIISGNGSDELFGTAGENEMTGGGGNDRILGFDGDDDLFGGLGNDILNGGNG 807
Query: 533 HEDLINAFADAPDLVQAGKD 552
++DL + AG D
Sbjct: 808 NDDLEGGDGNDIMYGGAGND 827
>gi|30584797|gb|AAP36651.1| Homo sapiens matrix metalloproteinase 15 (membrane-inserted)
[synthetic construct]
Length = 565
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 48/162 (29%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + W+N+ + + T + E R A W + L F+E
Sbjct: 29 LTGRKWNNHHLTFSIQNYTEKLGWYHS-------MEAVRRAFRVWEQATPLVFQEVPYED 81
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+ +
Sbjct: 82 IRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSST 141
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + N + D +N
Sbjct: 142 DLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDN 183
>gi|115496089|ref|NP_001069451.1| matrix metalloproteinase-19 [Bos taurus]
gi|115305300|gb|AAI23723.1| Matrix metallopeptidase 19 [Bos taurus]
gi|296487677|gb|DAA29790.1| matrix metalloproteinase 19 [Bos taurus]
Length = 499
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 61/197 (30%), Gaps = 46/197 (23%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
+LL +W + ++ L + + A+ A WS V LTF E
Sbjct: 98 KYLLLG-HWRKKHLTFRILNLPSTLP-------SSTARAALLQAFQYWSNVAPLTFREVK 149
Query: 75 IH-SDIKFISSNNGYVCTPRYDSRYF-----------MEINFDKADVWRYGIGKGTILSH 122
+DI+ + ++FD+ ++W G +G L
Sbjct: 150 AGWADIRLSFHGRHSLYCSNSFDGPGRVLAHADIPELGSVHFDEDELWTEGTYRGVNLRI 209
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HEIGHALGL H Y + + A +
Sbjct: 210 IAAHEIGHALGLGH--------------------------SRYTQALMAPVYAGYRPYFK 243
Query: 183 PMVSDIVAVQKIYGAPK 199
D+ +Q +YG
Sbjct: 244 LHPDDVAGIQALYGKKS 260
>gi|297690065|ref|XP_002822446.1| PREDICTED: interstitial collagenase-like isoform 1 [Pongo abelii]
Length = 469
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 54/185 (29%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 108 RWEQTHLTYRIENYTPDLPRADVD-------HAIEKAFQLWSNVTPLTFTKVSEGQADIM 160
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 161 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLYRVAA 217
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 218 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGPSQNPVQPIG---PQT 274
Query: 183 PMVSD 187
P V D
Sbjct: 275 PKVCD 279
>gi|84502244|ref|ZP_01000392.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
gi|84389604|gb|EAQ02323.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
Length = 1580
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 74/248 (29%), Gaps = 5/248 (2%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+D L V + S+ G + T+ + + + G G D ++G + ++
Sbjct: 1079 VDRVLGTSVADTFTATGSGAISLFGRTGDDTLTAGSGNDILDGGLGADSLLGGNGDDTID 1138
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
S DV +G +G D Y + + + + A++ D L ++E ++
Sbjct: 1139 GGSNPDVINGGAGDDWVTYESAASGARRISLGGSAGEGGASQG--DVLINIENAIGSNFR 1196
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ + L + G D + +G D
Sbjct: 1197 DLFIGTGTANQLNGLQGDDTFFSGAGNDTIDGGSGDDVIDAGDGADSITGGAGIDTVRYA 1256
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ A + T G EG + + + + +I D G DH
Sbjct: 1257 SSAAVQINLAA---NIATGGQAEGDTFFGIENVVGSQNADTIIGDGQDNLIEGIGGDDHM 1313
Query: 471 SNFGCEEG 478
+
Sbjct: 1314 RGGLGADT 1321
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/433 (12%), Positives = 118/433 (27%), Gaps = 36/433 (8%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKAD-VWRYGIGKGTILSHNALHEIGHAL 132
+ + + ++ + G+ ++ + + D + G + A E+
Sbjct: 1001 TDDATLNLLNQSAGFGFALLRNATTMDLVALNNGDGTGSADLDFGEFIDVAATFELNTDT 1060
Query: 133 GLMHPGSYNGGYPVYGVDNDYEND-SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G + V+ D S + + S+ + T + + +
Sbjct: 1061 NEGDGSGGTLGADLTAVNVDRVLGTSVADTFTATGSGAISLFGRTGDDTLTAGSGNDI-L 1119
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW- 250
GA GN + I GDD + I L +
Sbjct: 1120 DGGLGADSLLGGN----GDDTIDGGSNPDVINGGAGDDWVTYESAASGARRISLGGSAGE 1175
Query: 251 -------------SSIGGYEKNMTIAQHT--------VIESVVGSSGNDVVIGNSANNVF 289
++IG +++ I T ++ +GND + G S ++V
Sbjct: 1176 GGASQGDVLINIENAIGSNFRDLFIGTGTANQLNGLQGDDTFFSGAGNDTIDGGSGDDVI 1235
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G D G +G+DT Y + + + + + + D +E + +
Sbjct: 1236 DAGDGADSITGGAGIDTVRYASSAAVQINLAAN----IATGGQAEGDTFFGIENVVGSQN 1291
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ Q +++E + + +G D D + +
Sbjct: 1292 ADTIIGDGQDNLIEGIGGDDHMRGGLGADTIIGYNGIDTASYQ---DSAVGVNVGIYRVG 1348
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
G R + E LE + LI+ A + G D
Sbjct: 1349 TGGTAEGDRLIYVERIIGSGHDDELVGGGTAPILEGAGGDDLLIDYGGAATIMGGNGDDT 1408
Query: 470 FSNFGCEEGRFVT 482
+ +
Sbjct: 1409 INAGTGADSIDGG 1421
Score = 42.1 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 41/248 (16%), Positives = 67/248 (27%), Gaps = 14/248 (5%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T D + + D R G+G TI+ +N + A N G G
Sbjct: 1292 ADTIIGDGQDNLIEGIGGDDHMRGGLGADTIIGYNGIDT---ASYQDSAVGVNVGIYRVG 1348
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
E D + D + + GA GN
Sbjct: 1349 TGGTAEGDRLIYVERIIGSGHDDELVGGGTAPILEGAGGDDLLIDYGGAATIMGGN---- 1404
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ +I G D + V+ IDL + S + +
Sbjct: 1405 GDDTINAGTGADSIDGGAGIDTVRYANTSSVQ--IDLAAGTGSGFAAEGDTL-----VNV 1457
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+V+GS+ D + G+ N G D G G D + ++ +
Sbjct: 1458 ENVIGSNAGDTLTGDDQVNRLEGLYGEDTIKGGLGNDLLLGGGNADVFVFDAVGFGRDLI 1517
Query: 329 DANEHKQD 336
+ D
Sbjct: 1518 LDWQDNYD 1525
Score = 38.2 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 41/327 (12%), Positives = 80/327 (24%), Gaps = 30/327 (9%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E +I S+ + + G + D G G I + + I
Sbjct: 1188 ENAIGSNFRDLFIGTGTANQLNGLQGDDTFFSGAGNDTIDGGSGDDVIDAGDGADSITGG 1247
Query: 132 LGLM------HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
G+ E D+F + +
Sbjct: 1248 AGIDTVRYASSAAVQINLAANIATGGQAEGDTFFGIENVVGSQNADTIIGDGQDNLIEGI 1307
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
++ GA N I Q IY G + + V+ I
Sbjct: 1308 GGDDHMRGGLGADTIIGYNGIDTASYQDSAVGVNVGIYRVGTGGTAEGDRLIYVERII-- 1365
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G + + ++ G ++G + ++ +G D DG +G+D
Sbjct: 1366 GSGHDDELVGGGTAPILEGAGGDDLLIDYGGAATIMGGNGDDTINAGTGADSIDGGAGID 1425
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T Y S + + D L +VE + ++
Sbjct: 1426 TVRYANTSSVQIDLAAGTG----SGFAAEGDTLVNVENVIGSNA---------------- 1465
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ L + E +
Sbjct: 1466 --GDTLTGDDQVNRLEGLYGEDTIKGG 1490
>gi|114640096|ref|XP_508722.2| PREDICTED: interstitial collagenase isoform 3 [Pan troglodytes]
Length = 469
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 54/185 (29%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 108 RWEQTHLTYRIENYTPDLPRADVD-------HAIAKAFQLWSNVTPLTFTKVSEGQADIM 160
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 161 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLYRVAA 217
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 218 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIG---PQT 274
Query: 183 PMVSD 187
P V D
Sbjct: 275 PKVCD 279
>gi|148653163|ref|YP_001280256.1| hypothetical protein PsycPRwf_1361 [Psychrobacter sp. PRwf-1]
gi|148572247|gb|ABQ94306.1| hypothetical protein PsycPRwf_1361 [Psychrobacter sp. PRwf-1]
Length = 2329
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 52/389 (13%), Positives = 108/389 (27%), Gaps = 56/389 (14%)
Query: 41 SFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYF- 99
S DI+ L+ + L + VDLTF + ++ ++ G +
Sbjct: 1953 SVDISVLSDSG-------LQGAATTVDLTFTAVADPVEMT-AQNSAGQAYEWVELNTNIK 2004
Query: 100 -MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
+ + + G L IG + G + + + D
Sbjct: 2005 MTDDDGSETLTLTIAPAAGKPFQDTMLFRIG-----------DDGTVMGLNNASADADGV 2053
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
S + V+DI + Y ++
Sbjct: 2054 AIS--------FDGTNYRLTGIPADKVNDIQILSHDYSGEVTYTTQSVETSNDDASAEVV 2105
Query: 219 IQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ ++ T+ GG N + I G N TI + + G
Sbjct: 2106 GTANLNLSNSVEINTGAQNDTITGGNGNDVINAGAGDDVIYGKAGNDTINGGEDDDDLKG 2165
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSG---------LDTFFY-------YAPSYLYK 317
+ GND++ G + ++ SG+D DG +G DT + +
Sbjct: 2166 AEGNDILNGGAGDDTLRGGSGDDYLDGGAGEDGLYGDTDNDTLVFDSANRFMNGGDGVDA 2225
Query: 318 IYRFENAIIVYDANEHKQDF------LSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + +S++E L + + ++++ T L
Sbjct: 2226 LLLPAASSTFDFNSLIGTVTNSSLNKVSNIEVLDLSGADFTITELTANAVIQITDENNHL 2285
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ +E G + G ++
Sbjct: 2286 EIDGDNSDSVQLTGNWEQGATSGGYTSYS 2314
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 30/227 (13%), Positives = 53/227 (23%), Gaps = 43/227 (18%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + D+ + +D L + I + S + T
Sbjct: 2037 DGTVMGLNNASADADGVAISFDGTNYRLTGIPADKVNDIQILSHDYSGEVTYTTQSVETS 2096
Query: 263 AQHTVIESVVGSSGNDV----VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
E V ++ N + + N+ +GNDV + +G D +
Sbjct: 2097 NDDASAEVVGTANLNLSNSVEINTGAQNDTITGGNGNDVINAGAGDDVIY---------- 2146
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ D ++ E L+ + L G D
Sbjct: 2147 ------------GKAGNDTINGGED---------------DDDLKGAEGNDILNGGAGDD 2179
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF--GSDRGAAA 423
G D + D N F G D A
Sbjct: 2180 TLRGGSGDDYLDGGAGEDGLYGDTDNDTLVFDSANRFMNGGDGVDAL 2226
>gi|332709829|ref|ZP_08429786.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332351427|gb|EGJ31010.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 367
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 47/134 (35%), Gaps = 6/134 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + +T++ + +D + G N +E + + G + I + +
Sbjct: 186 DEVIVGTSNDETLFGTADNDTI----YGQGGNDTIFGSEGVNILYGGAGDDLIFGGSNSD 241
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G +GND + + +N + GND D +G D I IV
Sbjct: 242 NIYGGTGNDRIFSSGGSNSVYGGIGNDFIDTGTGNDFVV--GGFGNDTIRLGGGQDIVVL 299
Query: 330 ANEHKQDFLSDVER 343
D + + E
Sbjct: 300 EARKGTDTIINFEA 313
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 52/138 (37%), Gaps = 5/138 (3%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + T+ +++ G GND + G+ N+ + +G+D+ G S D + +
Sbjct: 191 GTSNDETLFGTADNDTIYGQGGNDTIFGSEGVNILYGGAGDDLIFGGSNSDNIY--GGTG 248
Query: 315 LYKIYRFENAIIVYDANEHK-QDFLSDVERLR--FADQCIDSVNVKQRSILEYTASYEDL 371
+I+ + VY + D + + + F + I + +LE + +
Sbjct: 249 NDRIFSSGGSNSVYGGIGNDFIDTGTGNDFVVGGFGNDTIRLGGGQDIVVLEARKGTDTI 308
Query: 372 IQVIGQDVFESMKHFYEF 389
I +F + F
Sbjct: 309 INFEAGKMFLGLSGALTF 326
Score = 39.8 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 23/191 (12%), Positives = 55/191 (28%), Gaps = 33/191 (17%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++++ ++V++G S + F ++ ND G G DT F + +Y +
Sbjct: 176 LVDNLKVVPKDEVIVGTSNDETLFGTADNDTIYGQGGNDTIF--GSEGVNILYGGAGDDL 233
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
++ + + + + G +
Sbjct: 234 IFGGSNS--------------------------DNIYGGTGNDRIFSSGGSNSVYGGIGN 267
Query: 387 YEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFK 441
G D + + LG D+ + ++ + G + F
Sbjct: 268 DFIDTGTGNDFVVGGFGNDTIRLGGGQDIVVLEARKGTDTIINFEAGKMFLGLSGALTFS 327
Query: 442 ALEYIASHEDL 452
L + S D+
Sbjct: 328 NLTFNQSGGDV 338
>gi|194292665|ref|YP_002008572.1| hypothetical protein RALTA_B1940 [Cupriavidus taiwanensis LMG 19424]
gi|193226569|emb|CAQ72520.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424]
Length = 1062
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/324 (13%), Positives = 92/324 (28%), Gaps = 14/324 (4%)
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
H LG G + V + D + + S + + +
Sbjct: 711 HLLGGFEGGDWLQAASVNLMKVDVAAGASVDGDASGTVWANDQGLGGLDIPVGYSSLVRL 770
Query: 190 AVQKIYGAPK---GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
+ + GA S + + + I G + + + +
Sbjct: 771 DLDEQAGADSKLILSGSGKVTGFAFEDNNFATIDASALKGSGVTIVMEDPSDAAAFTFIG 830
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + + T+ +++ G+ G DV+ G + N+ F GND DG +G D
Sbjct: 831 SGNDDLVYASNSADTLNGGAGDDTLFGNGGADVINGGAGNDELFGGEGNDKIDGGAGDD- 889
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F + + A Y + L A + + ++ ++
Sbjct: 890 -FIAGGLHSDVLTGGAGADSFYFNFDQNH--------LAEAGKSTNPGAAAKQDVITDFK 940
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
ED I V + + + + + G + Y+G D NV
Sbjct: 941 VAEDTILVDVTNPLSAGDYAFYVTNAPGANGFPAFAYYIGDGLDPVNVVIRVGTYNEDGS 1000
Query: 427 ITHGVKEGRNPDAFKALEYIASHE 450
+ G + E A +
Sbjct: 1001 FNY-NANGTDLQLLFNTEGEAFNP 1023
>gi|329848341|ref|ZP_08263369.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843404|gb|EGF92973.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1667
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 62/512 (12%), Positives = 120/512 (23%), Gaps = 35/512 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ Y S G G L N +G
Sbjct: 893 DGGAGNDTLNGQAGFDIASYASATGPVTVSLALQGAAQATGNGNDLLTNFEGLLGSTFND 952
Query: 135 MHPGSYNGG---YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA- 190
G N + + S + + + A
Sbjct: 953 SLTGDNNANRLDGNTGNDTLVGGLGNDTYVINSAGDAFGEAAGGGLDTVESSITLTLSAE 1012
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-------KNYI 243
++ + + + + + GDD + I
Sbjct: 1013 LENLTLTSTAVINGTGNGLNNILTGNSATNVLSGGLGDDTYVVQNSSDNVVESAGQGTDI 1072
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ S+S G + +T+ I+ G+ + + GNS +N +GND G G
Sbjct: 1073 IFASASYSLAGRIVEVLTLTGAADID-ATGNGNANTLNGNSGHNRLDGGTGNDSLTGGLG 1131
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSIL 362
DT+ + +++E L I+ + ++L
Sbjct: 1132 NDTYVVNTT--GDLVTEAAGEGTDTVETSITLTLGANLENLSLIGATAINGIGNALDNVL 1189
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L + G D + S G + +Y + D +
Sbjct: 1190 TGNSGNNVLSGLAGNDTYYVQSQTDSVVESAGGGV---DVVYSSATRDFLGTQVENLIL- 1245
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
G + +E + + L D +VQ D E V
Sbjct: 1246 ----TGSANINGSGNELANRIEGNSGNNVLTGLAGDDTYVVQNTGDSTVEAAAEGTDTVE 1301
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
LGS + + G+ G L ++ L +
Sbjct: 1302 SAITWTLGSNVENLLLTGAA------------AVNGTGNTGNNVLSGNEANNVLSGLAGN 1349
Query: 543 APDLVQAGKDHFSNFGYEEGRSITFNPDLYLT 574
+Q D+ + ++ L
Sbjct: 1350 DTYYIQNSGDNVVEANGDGSDTVISTVSYSLA 1381
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 80/595 (13%), Positives = 172/595 (28%), Gaps = 65/595 (10%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
+++L +N D + S D + +A +S + E +
Sbjct: 1032 NNILTGNSATNVLSGGLGDDTYVVQNSSDNVVESAGQGTDIIFASASYS-LAGRIVEVLT 1090
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ ++ NG T +S + D G+G T + + + A G
Sbjct: 1091 LTGAADIDATGNGNANTLNGNSGHNRLDGGTGNDSLTGGLGNDTYVVNTTGDLVTEAAGE 1150
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + + + T++ D+++
Sbjct: 1151 GTDTVETSITLTLGANLENLSLIGATAINGIGNALDNVL--------------------- 1189
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G+ GNN+ + G+D + + ++ +
Sbjct: 1190 ----TGNSGNNV---------------LSGLAGNDTYYV--QSQTDSVVESAGGGVDVVY 1228
Query: 255 GYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ T +E+++ S N GN N +SGN+V G +G DT+
Sbjct: 1229 SSATRDFL--GTQVENLILTGSANINGSGNELANRIEGNSGNNVLTGLAGDDTYVVQNT- 1285
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLI 372
+ S+VE L ++ ++L + L
Sbjct: 1286 -GDSTVEAAAEGTDTVESAITWTLGSNVENLLLTGAAAVNGTGNTGNNVLSGNEANNVLS 1344
Query: 373 QVIGQDVFESMKHFYEF--GLSEGRDITFDSYLYLGSYDDL--------RNVFGSDRGAA 422
+ G D + +G D + Y + + N+ + G A
Sbjct: 1345 GLAGNDTYYIQNSGDNVVEANGDGSDTVISTVSYSLAGRYVEFLTLAGAANLDATGNGNA 1404
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+GV +L+ A + +I + +V +D + E V+
Sbjct: 1405 NTLTGNNGVNTLSGLGGHDSLDGGAGADTMIGGTGNDSYVVDDAEDVVTEAAGEGIDLVS 1464
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYIT------HGVKEGRNPDAFKALEYIASHEDL 536
L + D + GSD + + GV S +++
Sbjct: 1465 TALTHTLAANVDNLTLTGSDAVNGTGNALNNVLTGNSGVNVLTGGLGNDTYYVQTSGDNV 1524
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA 591
+ A + D++ + + + Y E ++T + ++ T + G+ +
Sbjct: 1525 VEASGEGTDVISSTVSYSLSGRYAETINLTGSANVNATGNSLANTLTGNSGNNTL 1579
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 58/448 (12%), Positives = 115/448 (25%), Gaps = 34/448 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN-----MTI 262
+ + G+D L + +G I+ +++ G + +T+
Sbjct: 949 TFNDSLTGDNNANRLDGNTGNDTL-VGGLGNDTYVINSAGDAFGEAAGGGLDTVESSITL 1007
Query: 263 AQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+E++ S+ GN NN+ +S +V G G DT+ S
Sbjct: 1008 TLSAELENLTLTSTAVINGTGNGLNNILTGNSATNVLSGGLGDDTYVVQNSSDNVVESAG 1067
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVF 380
+ I++ + + VE L + L + + L G D
Sbjct: 1068 QGTDIIFASASYSL-AGRIVEVLTLTGAADIDATGNGNANTLNGNSGHNRLDGGTGNDSL 1126
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ ++ D+ ++ + I G
Sbjct: 1127 TGGLGNDTYVVNTTGDLVTEAAGEGTDTVETSITLTLGANLENLSLIGATAINGIGNALD 1186
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
L + + L + VQ D E D + D L
Sbjct: 1187 NVLTGNSGNNVLSGLAGNDTYYVQSQTDSVV-----ESAGGGVDVVYSSATRDFLGTQVE 1241
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYE 560
+ + + G + + + + L D +VQ D E
Sbjct: 1242 NLILTGSANINGSGNELANRIEGN------SGNNVLTGLAGDDTYVVQNTGDSTVEAAAE 1295
Query: 561 EGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSE 620
++ L S + + + G G +G S +
Sbjct: 1296 GTDTVESAITWTLGSNVE--------------NLLLTGAAAVNGTGNTGNNVLSGNEANN 1341
Query: 621 KSRDKADLSLSFDHKKVDLYTDYFGDGN 648
A + D + GDG+
Sbjct: 1342 VLSGLAGNDTYYIQNSGDNVVEANGDGS 1369
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 73/491 (14%), Positives = 132/491 (26%), Gaps = 40/491 (8%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
++ ++I ++ + F D + A+
Sbjct: 677 ALTANIVLNETSLTSTRLSLLNFEVFNVTFGSGNDTVTRTTATSEQFRLAGGDD---AIT 733
Query: 134 LMHPGSYNGGYPVYGVD-NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
L Y G D N+S T V SY + Y + ++
Sbjct: 734 LNSAIGYQYVEGGSGYDFLTVRNNSQDTGVTSYIYNDSGVRFYGDFYNEGANRTQFNGME 793
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQT-IYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+I A G+++ ++ + + + G D L+L L G + WS
Sbjct: 794 RI--AYTMGRGDDVMNVDGNALGAAGNRLNLSGGTGIDHLNLNLSGLSGLNL-----VWS 846
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ T A I +V +SG+ ++ N+ + S+ ND DG +G DT A
Sbjct: 847 GVTLTIGVNTFASFESI-NVALASGSQYILRGGGNDSYAGSNSNDTIDGGAGNDTLNGQA 905
Query: 312 PSYLYKIYRFENAIIVY-------DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ + V A + D L++ E L + + L+
Sbjct: 906 GFDIASYASATGPVTVSLALQGAAQATGNGNDLLTNFEGLLGSTFNDSLTGDNNANRLDG 965
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ L+ +G D + FG + G + + A
Sbjct: 966 NTGNDTLVGGLGNDTYVINSAGDAFGEAAGGGLDTVESSITLTLSAELENLTLTSTAVI- 1024
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
G L ++ L D +VQ D+ E D
Sbjct: 1025 --------NGTGNGLNNILTGNSATNVLSGGLGDDTYVVQNSSDNVV-----ESAGQGTD 1071
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
SY + A G + + H L +
Sbjct: 1072 IIFASASYSLAGRIVEVLTLTGAADIDATGNGNANTLNGN------SGHNRLDGGTGNDS 1125
Query: 545 DLVQAGKDHFS 555
G D +
Sbjct: 1126 LTGGLGNDTYV 1136
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 43/306 (14%), Positives = 81/306 (26%), Gaps = 37/306 (12%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
++ ++ NG T ++ D G G T++
Sbjct: 1389 TLAGAANLDATGNGNANTLTGNNGVNTLSGLGGHDSLDGGAGADTMIGGTGND------- 1441
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
Y D V ++ T ++ V
Sbjct: 1442 ------------------SYVVDDAEDVVTEAAGEGIDLVST----ALTHTLAANVDNLT 1479
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTE 248
+ G+ + N + + + + G+D + G D+ +
Sbjct: 1480 LTGSDAVNGTGNA--LNNVLTGNSGVNVLTGGLGNDTYYVQTSGDNVVEASGEGTDVISS 1537
Query: 249 SWSSIGGYEKNMTIA-QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ S TI + + G+S + + GNS NN G DV G G D F
Sbjct: 1538 TVSYSLSGRYAETINLTGSANVNATGNSLANTLTGNSGNNTLNGKGGADVLAGGLGADLF 1597
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ A S I F A + + + + I +A+
Sbjct: 1598 LFEAASGADTISDFSAAQNDTININAYTSGVVSSGMVTQSGANVLITLGGGNVITVNSAT 1657
Query: 368 YEDLIQ 373
D++
Sbjct: 1658 TADVLA 1663
>gi|114662852|ref|XP_523380.2| PREDICTED: matrix metalloproteinase 15 isoform 2 [Pan troglodytes]
Length = 671
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 48/162 (29%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + W+N+ + + T + E R A W + L F+E
Sbjct: 136 LTGRKWNNHHLTFSIQNYTEKLGWYHS-------MEAVRRAFRVWEQATPLVFQEVPYED 188
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+ +
Sbjct: 189 IRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSST 248
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + N + D +N
Sbjct: 249 DLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDIDN 290
>gi|221235629|ref|YP_002518066.1| iron-regulated protein FrpC [Caulobacter crescentus NA1000]
gi|220964802|gb|ACL96158.1| iron-regulated protein frpC [Caulobacter crescentus NA1000]
Length = 657
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 49/342 (14%), Positives = 95/342 (27%), Gaps = 24/342 (7%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + D G G +A + L L + GG
Sbjct: 52 NDVLQGGDGDDYMLGGPGNDTLDGGAGSDWAAYEDATAGVKVDLNLSGAQNTGGGGTDRL 111
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ S + + + + T D ++G+ +
Sbjct: 112 TSIENLYGSAFNDTLIGNAGDNMITGGAGADSITGGKGDDT----LWGSAGNDTLDGG-D 166
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT----IAQ 264
+ I G D T + +IG + ++ +
Sbjct: 167 GDDWMVGGAGDDVIKGGAGGDWSSYEDATAGVTVDLTKTTAQDTIGAGKDTLSGVENLWG 226
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSSGLDTFFYYAPSYL 315
+ + G +G++ + G++ ++ + +G+D V DG G DT Y +
Sbjct: 227 SKFADVLTGDAGSNYIWGDAGDDKLYGGAGDDFFAGGAGVNVIDGGEGFDTIDYGMSAVG 286
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
++ N + D LS +E + + + + L A + L
Sbjct: 287 VEVDLSRNIATSRFGDTSISDTLSSIELVTGSIYADFIIGNMAENYLYGDAGNDVLRAEG 346
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
G DV E + S L G DD +V G
Sbjct: 347 GGDVLEGGEGDDFLIGS------LSDILIGGGGDDQLSVSGG 382
Score = 37.5 bits (85), Expect = 8.1, Method: Composition-based stats.
Identities = 12/148 (8%), Positives = 29/148 (19%), Gaps = 7/148 (4%)
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
V L + + ++ + L G D + +G D
Sbjct: 3 LGEWVMDLNGTQGADTLIGGAEDDVIYGFGGNDTLRGGAGDDAIAGHEGNDVLQGGDGDD 62
Query: 397 ITFD-------SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+ + + + G + Y ++
Sbjct: 63 YMLGGPGNDTLDGGAGSDWAAYEDATAGVKVDLNLSGAQNTGGGGTDRLTSIENLYGSAF 122
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEE 477
D + A + G +
Sbjct: 123 NDTLIGNAGDNMITGGAGADSITGGKGD 150
>gi|260818324|ref|XP_002604333.1| hypothetical protein BRAFLDRAFT_125272 [Branchiostoma floridae]
gi|229289659|gb|EEN60344.1| hypothetical protein BRAFLDRAFT_125272 [Branchiostoma floridae]
Length = 524
Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 47/218 (21%), Positives = 70/218 (32%), Gaps = 63/218 (28%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
+ IAD+ L W I Y+ + T + +TE ++ R A G WS LTF
Sbjct: 131 DIIADYQLSGTKWEKNHITYRIENFTPY-----LTE--QEVRDTVRTAFGVWSDYTPLTF 183
Query: 71 EETSIHS----DI--KFISSNNGYV------CTPRYDSR-----------------YFME 101
E DI +F S ++G P +
Sbjct: 184 SEVRDRDRTDVDILVEFTSGDHGDNSPFDGRYVPGTGRGQNLAHAFQPPRDSHSYRIDGD 243
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTS 161
+FD + W +G L A+HE GHALG+ H + +
Sbjct: 244 SHFDGDEEWTLNTDRGVNLLIVAIHEFGHALGISH---------------TPTLGAIMFP 288
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
Y D D A+Q++YGA +
Sbjct: 289 AYVYQEEPCIHPD------------DKAAIQELYGAQE 314
>gi|330896840|gb|EGH28436.1| putative hemolysin-type calcium-binding region [Pseudomonas
syringae pv. japonica str. M301072PT]
Length = 436
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 82/293 (27%), Gaps = 12/293 (4%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S +D ++G+S N+V G D G G D + + +
Sbjct: 53 HIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTV 112
Query: 330 ANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ +++E L I+ ++++ AS L G D+
Sbjct: 113 VSSVSWTLGANLENLLLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTGGDGSDS 172
Query: 389 FGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRGAAARH---YITHGVKEGRNPDAFKAL 443
+ + + R + ++ +G D + + S A + G +
Sbjct: 173 YYVDDAADRVVETNADAKVGGVDTVYSSLASYTLGANLENIVINSSGAANATGNALDNLI 232
Query: 444 EYIASHEDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
A + + + L ++L +D
Sbjct: 233 YAGAGDNVMDGRGGNDTASYLFATAGVTVALNTSAQQATGGSGLDTLKGTENLIGSQFAD 292
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
++ T DA L A + LI + G DH+
Sbjct: 293 TLTGNKNANTLS-----GGDANDTLSGGAGDDVLIGGSGADTLIGGTGADHYV 340
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/307 (12%), Positives = 90/307 (29%), Gaps = 17/307 (5%)
Query: 192 QKIYGAPKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLL-------DLTLIGGVKN 241
Q G G+ ++ + G+D+ +T +
Sbjct: 48 QNEGGHIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPS 107
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+D S S G + + G++ +V+IGN++NN+ ++G D+ G
Sbjct: 108 QVDTVVSSVSWTLGANLENLLLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTGG 167
Query: 302 SGLDTFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRF-ADQCIDSVNVK 357
G D+++ + + + ++ +++E + + ++
Sbjct: 168 DGSDSYYVDDAADRVVETNADAKVGGVDTVYSSLASYTLGANLENIVINSSGAANATGNA 227
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+++ A + G D + F G++ + + D L+
Sbjct: 228 LDNLIYAGAGDNVMDGRGGNDTASYL--FATAGVTVALNTSAQQATGGSGLDTLKGTENL 285
Query: 418 DRGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
A + + L A + LI + G DH+
Sbjct: 286 IGSQFADTLTGNKNANTLSGGDANDTLSGGAGDDVLIGGSGADTLIGGTGADHYVFNSSS 345
Query: 477 EGRFVTF 483
+
Sbjct: 346 DTGLGGL 352
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 82/283 (28%), Gaps = 23/283 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ +TE N + + S + E + + N
Sbjct: 88 DIYVVDNAFDTVTESNDS-PSQVDTVVSSVSWTLGANLENLLLTGVSAINGTGNAVKNVI 146
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ + AD+ G G + +A +
Sbjct: 147 IGNASNNILDGAAGADMLTGGDGSDSYYVDDAA---------------DRVVETNADAKV 191
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ +S+ SY + + A + + GA G+N+ + +
Sbjct: 192 GGVDTVYSSLASYTLGANLENIVINSSGAANATGNALDNLIYAGA-----GDNVM--DGR 244
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ +G L+ + + ++ G + T+ + ++
Sbjct: 245 GGNDTASYLFATAGVTVALNTSAQQATGGSGLDTLKGTENLIGSQFADTLTGNKNANTLS 304
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
G ND + G + ++V SG D G +G D + + + S
Sbjct: 305 GGDANDTLSGGAGDDVLIGGSGADTLIGGTGADHYVFNSSSDT 347
>gi|268609717|ref|ZP_06143444.1| Ig family protein [Ruminococcus flavefaciens FD-1]
Length = 1014
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 46/298 (15%), Positives = 79/298 (26%), Gaps = 68/298 (22%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ P I+ GG+D + D G + + L + + N
Sbjct: 415 DDTITGYPETNYIWGLGGNDYICGNKTDDYLFGGDGDDTLTLPDGCFGLLSHNSGNNYAY 474
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG--SSGLDTFFYYAPSYLYKIYR- 320
+++ GND + G +++ SG D+ G D Y
Sbjct: 475 GMDGNDTIRLGCGNDFIWGGKGDDIIKSGSGEDIIYYELGDGNDYIDDTTGKGSYPSSGK 534
Query: 321 -------------------------------FENAIIVYDANEHKQDFLSDVERLRFADQ 349
+ I + + +E + FAD
Sbjct: 535 DVLWLGEGILPDQVQVSFSDKYYEYNLHIMKTGDTITIPGNMYSGITPVFPIEEIHFADG 594
Query: 350 CI--DSVNVKQRSILEYTASYEDLIQVI--------------------GQDVFESMKHFY 387
+++ L T + L V+ G DV K
Sbjct: 595 TTWGRLDLLERTRYLYGTDGDDTLTAVVDVDAEFKKEYVPDAILKGFGGNDVLTGAKGND 654
Query: 388 EFGLSEGRDI----TFDSYLY--LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ +G D+ D Y LG +DL ++ Y + EG NPD
Sbjct: 655 KIYGGKGDDVMRGGNGDDTFYYELGDGNDLIDMGTGKSSYPQGGYNVVVLGEGINPDE 712
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 52/382 (13%), Positives = 97/382 (25%), Gaps = 53/382 (13%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
S+N D G G I S + I + LG Y
Sbjct: 465 SHNSGNNYAYGMDGNDTIRLGCGNDFIWGGKGDDIIKSGSGEDIIYYELG--DGNDYIDD 522
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCATPM-VSDIVAV-QKIYGAPK- 199
G D Q S D + Y M D + + +Y
Sbjct: 523 TTGKGSYPSSGKDVLWLGEGILPDQVQVSFSDKYYEYNLHIMKTGDTITIPGNMYSGITP 582
Query: 200 -------GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-------KNYIDL 245
+ + + + +Y + GDD L + + I
Sbjct: 583 VFPIEEIHFADGTTWGRLDLLERTRY---LYGTDGDDTLTAVVDVDAEFKKEYVPDAILK 639
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI--GNSANNVFFES--------SGN 295
+ G + N I + + G +G+D N++ G
Sbjct: 640 GFGGNDVLTGAKGNDKIYGGKGDDVMRGGNGDDTFYYELGDGNDLIDMGTGKSSYPQGGY 699
Query: 296 DVFDGSSGL--DTFFYYAPSYLYK----IYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+V G+ D + Y + ++ + L ++ ++FAD
Sbjct: 700 NVVVLGEGINPDEVTIERSADEYSYTLWFDKTGESLGMTGNVVSGLTNLFQIKEIQFADG 759
Query: 350 CIDSVNVK------------QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR-- 395
+ + L + + + + G D + G
Sbjct: 760 TVWDHDYLDSHYVTWIKGTDGDDSLMDSTADDIVYCGKGNDYIRGRGGDDLYIYELGDGC 819
Query: 396 DITFDSYLYLGSYDDLRNVFGS 417
D DS ++ Y+ L+ G
Sbjct: 820 DTIIDSTVWGNGYNTLKFGEGI 841
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 80/303 (26%), Gaps = 32/303 (10%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG+ +D + G N + GND G+ D + + + + +
Sbjct: 409 LVGTENDDTITGYPETNYIWGLGGNDYICGNKTDD--YLFGGDGDDTLTLPDGCFGLLSH 466
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
N + + + + + G D+ +S
Sbjct: 467 NS----------------GNNYAYGMDGNDTIRLGCGNDFIWGGKGDDIIKSGSGEDIIY 510
Query: 391 LSEGRDITF-DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G + D GSY G D + V+ + ++ +I
Sbjct: 511 YELGDGNDYIDDTTGKGSYP----SSGKDVLWLGEGILPDQVQVSFSDKYYEYNLHIMKT 566
Query: 450 EDLINAFADAPDLVQVGKD----HFSNFGCEEGRFVTFDSYLYL--GSYDDLRNVFGSDR 503
D I + + HF++ G GR + YL DD
Sbjct: 567 GDTITIPGNMYSGITPVFPIEEIHFAD-GTTWGRLDLLERTRYLYGTDGDDTLTAVVDVD 625
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ Y+ + +G L ++ + D G D F +
Sbjct: 626 AEFKKEYVPDAILKGF--GGNDVLTGAKGNDKIYGGKGDDVMRGGNGDDTFYYELGDGND 683
Query: 564 SIT 566
I
Sbjct: 684 LID 686
Score = 41.7 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 42/118 (35%), Gaps = 8/118 (6%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+ G+D ++ ++A+++ + GND G G D + Y I I
Sbjct: 774 WIKGTDGDDSLMDSTADDIVYCGKGNDYIRGRGGDDLYIYELGDGCDTI-------IDST 826
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE-YTASYEDLIQVIGQDVFESMKHF 386
+ + L E + + ++ + + Y S ++V G +
Sbjct: 827 VWGNGYNTLKFGEGIVMENIYTETSVYEGTKVDRFYIGSKNSYVEVSGINEVVFSDGT 884
>gi|256829658|ref|YP_003158386.1| hemolysin-type calcium-binding protein [Desulfomicrobium baculatum
DSM 4028]
gi|256578834|gb|ACU89970.1| Hemolysin-type calcium-binding region [Desulfomicrobium baculatum DSM
4028]
Length = 2836
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 70/539 (12%), Positives = 141/539 (26%), Gaps = 78/539 (14%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+++ + ++ + I D D G G T++ + G +H +
Sbjct: 1730 GTTDTAHGDVLTGNTLANLLIGLDGDDTLIGGSGNDTLIGGVGADSL---DGGLHSDMVD 1786
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
V+ + + + ++ D G +DI + G +
Sbjct: 1787 YSASASWVNVNLNLATAQ---LGGGDGNHALGDTLAGIENLTGTNDIAHGDVLTGNNLSN 1843
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
L + + + F TIY G+D +D GG ++ G +
Sbjct: 1844 LLSGLDG-DDTIYGGGFYDTIYGGDGNDSID----GGTHEDAIYGGTGNDTLHGGGGIDS 1898
Query: 262 IAQHTVIESVVGSSGN--DVVIGNSANNVFFESSGN--DVFDGSSGLDTFFYYAPSYLYK 317
I + + G + N D++IG + N+ S D G G D
Sbjct: 1899 IRGGAGDDYLYGGADNIQDLLIGGTGNDTLEGGSATLWDTLVGGMGADRIIGNGVRSSAS 1958
Query: 318 IYRFENAIIVY---------------------------DANEHKQDFLSDVERLRFADQC 350
+ ++ D L+ + +
Sbjct: 1959 YELTGHGDYDVNWQGVYLDLRLQGLDADGNLMVQPGKPGGDDATGDILTGIVNAVGTNGA 2018
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ Q + + + + +I +G D + + G D+ + Y +
Sbjct: 2019 DTLIGNDQNNEMLGQDADDLMIGGVGNDSLWGVNNNDTLEGGLGEDLIWGGMDYDIASY- 2077
Query: 411 LRNVFGSDRGAAARHYITHGV--------KEGRNPDAFKALEYIASHEDLINAFADAPDL 462
G + ++Y G +E + + + + D + +
Sbjct: 2078 ANAASGVNVSLEIQNYDADGNYSRQSGAGEENGDSLWYMDGLWGSEFNDTLTGRSTDIPD 2137
Query: 463 VQVGKDHFSNFGCEEGRF-----------VTFDSYLYLGS----YDDLRNVFGSDRGAAA 507
+ G ++ D+ Y S DL G
Sbjct: 2138 YMSVHNLIEGRGGDDILAGLSGNDTLDGGTGSDTANYSLSTSAVNVDLALSTAQTGGEVG 2197
Query: 508 RHY---------ITHGVKEGRNPDA---FKALEYIASHEDLINAFADAPDLVQAGKDHF 554
H G G L +A + LI D + AG D F
Sbjct: 2198 NHAAGDVLISIENVTGSAYGDTLTGDGGNNVLSGLAGDDSLIGGGGDDTLIGGAGSDTF 2256
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 70/536 (13%), Positives = 134/536 (25%), Gaps = 70/536 (13%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
S++ + ++ I D D G G T++S + G Y
Sbjct: 586 IGSNDATHGDVLTGNAANNHLIGLDGDDTLIGGAGNDTLVSGAGADRVDGGTGTRDLADY 645
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ VD + +N + + + + SD ++ G+ +
Sbjct: 646 SASTAWVNVDLNIQNGTTAQTGGGAGNHAEGDILTGIEDVNGSQYSD--SLTGNGGSNRI 703
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGG 255
Y + F TI+ G+D +D + G N SI G
Sbjct: 704 WA----YDGDDTIFGGGFYDTIHGGDGNDSIDGGTHEDFIYGDAGNDTLHGGGGIDSIWG 759
Query: 256 YEKNMTIAQHTVI--ESVVGSSGNDVVIGNSA--NNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + + + ++G +GND + G SA + G D G+ + Y
Sbjct: 760 GAGDDYLYGGSDNTQDLLIGGTGNDTLEGGSATLLDTLIGGMGADRIIGNGIRSSASYEL 819
Query: 312 PSYLYKIYRFENAIIVY------------------DANEHKQDFLSDVERLRFADQCIDS 353
Y ++ + ++ D L+ + +
Sbjct: 820 TGYGDFDVSYQGVYLDLRLQGLDADGNLMVQPGKPGGDDATGDILTGIVNAVGTNGSDTL 879
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY--------- 404
+ Q + + + +I G D E + + G D + Y
Sbjct: 880 IGNDQANEMFGVDGDDLMIGGAGNDKLEGVNNNDTLEGGLGADYIWGGMDYDIASYANAA 939
Query: 405 -LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
+ G GA + +G F ++ E A
Sbjct: 940 SGVNVSLEIQKGGLQSGAGEENGDELWYMDGLWGSEFNDTLTGSTVEQPEYLSAQNLLQG 999
Query: 464 QVGKDHFSNFGCEEGRFVT--FDSYLYLGS--------YDDLRNVFGSDRGAAARHYITH 513
G D + G + D+ Y S G D A + +
Sbjct: 1000 GAGDDVLAGLGGNDTLDGGDGIDTADYSLSEASVLVDLNLTTAQTGGGDVTTALYWFDAY 1059
Query: 514 GVKEGRNPDAF-----------------KALEYIASHEDLINAFADAPDLVQAGKD 552
+ L + L + G D
Sbjct: 1060 TSGTRYGGNHAQGDMLVSIENVTGSAYGDTLIGDGGNNVLSGLDGADSLVGGDGSD 1115
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 58/408 (14%), Positives = 111/408 (27%), Gaps = 52/408 (12%)
Query: 206 IYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+Y + T+ G D +D + DLN + GG +
Sbjct: 1569 VYGFVGNDILRGGVNADTLDGGLGTDTVDYS-ASAAWVQADLNLATAQIGGGAGNDALGD 1627
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
IE++ GSS +D + G+ NV +G D G +G DT + + +
Sbjct: 1628 VLAGIENLTGSSWDDSLTGDGQANVLTGLAGIDTLIGGAGNDTLI--GGAGVDSMDGGTG 1685
Query: 324 AIIVYDANEHKQ----------------------DFLSDVERLRFADQC---IDSVNVKQ 358
+ + D L+ +E L
Sbjct: 1686 TDMGDYSGGASWVQVNLTLATAQVGGGADNDALGDTLAGIENLTGTTDTAHGDVLTGNTL 1745
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI---TFDSYLYLGSYDDLRNVF 415
++L + LI G D D+ + + + +
Sbjct: 1746 ANLLIGLDGDDTLIGGSGNDTLIGGVGADSLDGGLHSDMVDYSASASWVNVNLNLATAQL 1805
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASH--EDLINAFADAPDLVQVGKDH--FS 471
G G A G++ + + + + +L++ + G +
Sbjct: 1806 GGGDGNHALGDTLAGIENLTGTNDIAHGDVLTGNNLSNLLSGLDGDDTIYGGGFYDTIYG 1865
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
G + T + +Y G+ +D + G G+ R L A
Sbjct: 1866 GDGNDSIDGGTHEDAIYGGTGNDTLHGGG-------------GIDSIRGGAGDDYLYGGA 1912
Query: 532 SH--EDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD 577
+ + LI + + + G I N SY+
Sbjct: 1913 DNIQDLLIGGTGNDTLEGGSATLWDTLVGGMGADRIIGNGVRSSASYE 1960
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 66/502 (13%), Positives = 129/502 (25%), Gaps = 56/502 (11%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ +G + I D G G T + I G
Sbjct: 2219 TLTGDGGNNVLSGLAGDDSLIGGGGDDTLIGGAGSDTFQGGDGDDLIRA--GAGDVVDGG 2276
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP----MVSDIVAVQKIYGA 197
G V +++Y + + T++ + V+D +
Sbjct: 2277 VGSDVLVSEDEYLDVTSSTTITGIERIDLTGAGKDLAVNGDAILLNGVADPAGSGFMALV 2336
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----------GVKNYIDLN 246
G G+++ ++ + + G L N I+L
Sbjct: 2337 VNGDDGDSVIRVADGWSWTLVASDMTVGGDGLTYALYEASKAGQTVRLYMETGLNEIELA 2396
Query: 247 TESWSSIGGYEKNM-----TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ +G + ++ G G+D ++G ++ +G+D+ DG
Sbjct: 2397 DGVYHVLGTEGHDDLTTVWDFTDSRHPFNIQGLGGDDTLLGGPGDDTLAGGAGSDLMDGG 2456
Query: 302 SGLDTFFYYAPSYLYKIY-----RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+G D Y + + AN D L E + ++ +
Sbjct: 2457 AGYDMASYSTSASWVDMDLNLQDGVTAQSGGGAANHAAGDTLIGFEGVIGSNDAAHGDVL 2516
Query: 357 KQRS---ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS---YDD 410
+L + L+ G D + +G D D + D
Sbjct: 2517 TGDDQANMLVGLDGDDSLVGGAGNDTLVGGLGYDTLEGGDGDDWFQDGVGSYDNTYTGDY 2576
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L G D + V + +F Y ++ D + + + D
Sbjct: 2577 LVGGAGIDTVDYSNSLDVCMVDLTDSWYSFPNSSYSDAYCDTLVGIEN--IIGSQWFDSL 2634
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
G LG D + GSD L+
Sbjct: 2635 LGDGGANMIDGGGYWDYILGRGGDDTLLGGSD---------------------NDTLDGG 2673
Query: 531 ASHEDLINAFADAPDLVQAGKD 552
A ++ + + + AG D
Sbjct: 2674 AGNDFMDGGADNDLLIGGAGID 2695
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/371 (13%), Positives = 90/371 (24%), Gaps = 23/371 (6%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTE------------SWSSIGGYEKNMTIAQHTVIESVVGS 274
G D +D T + ++ G N +I + G
Sbjct: 451 GGDTVDYTASTAAVDIDLTRATQAGGHAEGDVLIGIENVIGSGFNDSITGDAAANFLSGL 510
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--LYKIYRFENAIIVYDANE 332
G D ++G N+ +G D+ DG +G D Y + + +
Sbjct: 511 DGTDTLLGGVGNDTLRGGAGADLIDGGAGQDFADYRTSASWVNVDLNIQDGTTAQSGGGA 570
Query: 333 H---KQDFLSDVERLRFADQC---IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ D L +E L ++ + L + LI G D S
Sbjct: 571 DNDAEGDTLIGIENLIGSNDATHGDVLTGNAANNHLIGLDGDDTLIGGAGNDTLVSGAGA 630
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G T D Y S + G A+ G +
Sbjct: 631 DRVDGGTG---TRDLADYSASTAWVNVDLNIQNGTTAQTGGGAGNHAEGDILTGIEDVNG 687
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ + D + + + D G D + ++G
Sbjct: 688 SQYSDSLTGNGGSNRIWAYDGDDTIFGGGFYDTIHGGDGNDSIDGGTHEDFIYGDAGNDT 747
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
G D + + + LI + + + G I
Sbjct: 748 LHGGGGIDSIWGGAGDDYLYGGSDNTQDLLIGGTGNDTLEGGSATLLDTLIGGMGADRII 807
Query: 567 FNPDLYLTSYD 577
N SY+
Sbjct: 808 GNGIRSSASYE 818
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 63/205 (30%), Gaps = 22/205 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG------------- 255
+ T+ G D D +L +DLN + + GG
Sbjct: 1002 GDDVLAGLGGNDTLDGGDGIDTADYSL-SEASVLVDLNLTTAQTGGGDVTTALYWFDAYT 1060
Query: 256 ----YEKNMTIAQH-TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY- 309
Y N IE+V GS+ D +IG+ NNV G D G G DT Y
Sbjct: 1061 SGTRYGGNHAQGDMLVSIENVTGSAYGDTLIGDGGNNVLSGLDGADSLVGGDGSDTADYS 1120
Query: 310 -YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + N + D L+ +E + + V +IL+
Sbjct: 1121 LSTSAVNVDLTLTTSQTGGEAGNHAEGDVLTGMENVTGSAHADTLVGDAGVNILDGLGGD 1180
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSE 393
+ +I G D +
Sbjct: 1181 DVIIAGAG-DTVLGGAGSDVLYSGD 1204
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 72/261 (27%), Gaps = 34/261 (13%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
+ S++ + D + M + D D G G T++ + G
Sbjct: 2502 EGVIGSNDAAHGDVLTGDDQANMLVGLDGDDSLVGGAGNDTLVGGLGYDTLEGGDG---- 2557
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+D+ D + +Y + +
Sbjct: 2558 -------------DDWFQDGVGSYDNTYTGDYLVGGAGIDTVDYSNSLD----------V 2594
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSG---GDDLLDLTLIGGVKNYIDLNTESWSSIG 254
L ++ Y + T+ G D L G N ID W I
Sbjct: 2595 CMVDLTDSWYSFPNSSYSDAYCDTLVGIENIIGSQWFDSLLGDGGANMID-GGGYWDYIL 2653
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + T+ + +++ G +GND + G + N++ +G D G +G D
Sbjct: 2654 GRGGDDTLLGGSDNDTLDGGAGNDFMDGGADNDLLIGGAGIDTIQGGTGDD---LIHGGA 2710
Query: 315 LYKIYRFENAIIVYDANEHKQ 335
+ + +
Sbjct: 2711 DDVVDGGDGFDTFRLEDNIGT 2731
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 45/265 (16%), Positives = 82/265 (30%), Gaps = 11/265 (4%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D G+G+ I ++I + + Y D +Y
Sbjct: 2041 GGVGNDSLWGVNNNDTLEGGLGEDLIWGG-MDYDIASYANAASGVNVSLEIQNYDADGNY 2099
Query: 154 ENDSFLTSVMSYFMPQDSMMDAS-FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
S + + S F T +DI ++ +G G++I
Sbjct: 2100 SRQSGAGEENGDSLWYMDGLWGSEFNDTLTGRSTDIPDYMSVHNLIEGRGGDDI------ 2153
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
T+ G D + +L N +DL + + G + IE+V
Sbjct: 2154 LAGLSGNDTLDGGTGSDTANYSLSTSAVN-VDLALSTAQTGGEVGNHAAGDVLISIENVT 2212
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS+ D + G+ NNV +G+D G G DT + + ++
Sbjct: 2213 GSAYGDTLTGDGGNNVLSGLAGDDSLIGGGGDDTLI--GGAGSDTFQGGDGDDLIRAGAG 2270
Query: 333 HKQDFLSDVERLRFADQCIDSVNVK 357
D + L D+ +D +
Sbjct: 2271 DVVDGGVGSDVLVSEDEYLDVTSST 2295
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 61/402 (15%), Positives = 112/402 (27%), Gaps = 32/402 (7%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ + + D G G T + + L L + G
Sbjct: 995 NLLQGGAGDDVLAGLGGNDTLDGGDGIDTADYSLSEASVLVDLNLTTAQTGGG------- 1047
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+T+ + +F S + M+ I V +G+
Sbjct: 1048 --------DVTTALYWFDAYTSGTRYGGNHAQGDMLVSIENVTGSAYG-DTLIGD---GG 1095
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ G D D +L N +DL + + G + T +E
Sbjct: 1096 NNVLSGLDGADSLVGGDGSDTADYSLSTSAVN-VDLTLTTSQTGGEAGNHAEGDVLTGME 1154
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+V GS+ D ++G++ N+ G+DV +G DT + +Y + ++ +
Sbjct: 1155 NVTGSAHADTLVGDAGVNILDGLGGDDVIIAGAG-DTVL--GGAGSDVLYSGDASLDISA 1211
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH-FYE 388
+ +S VER+ + Y A+ + V
Sbjct: 1212 S-----TTISGVERIDLTGTAGSLTVSG--DAILYNAALDPAGSGNMALVVNGDAGDVLH 1264
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG-VKEGRNPDAFKALEYIA 447
G + T D LG G + Y+ G V G A +
Sbjct: 1265 IGYAVWNWATIDEGFALGDGKTYTVYEAESGGETVKLYLESGMVLGGGETAPVMADFAVT 1324
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+ ED AF +F + + L
Sbjct: 1325 TDEDTALAFQSGDFTADGRYADDHSFEPALVKITGLPDHGTL 1366
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 50/221 (22%), Gaps = 17/221 (7%)
Query: 280 VIGNSANNVFFESSGNDVFDGSS--------------GLDTFFYYAPSYLYKIYRFENAI 325
V G N+ +G+D DG G DT Y A + I
Sbjct: 414 VFGFDGNDTLRGGAGSDTLDGGGQTYASHTPWLYTQEGGDTVDYTASTAAVDIDLTRATQ 473
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ D L +E + + + L + L+ +G D
Sbjct: 474 A---GGHAEGDVLIGIENVIGSGFNDSITGDAAANFLSGLDGTDTLLGGVGNDTLRGGAG 530
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
G+D DL G+ + +
Sbjct: 531 ADLIDGGAGQDFADYRTSASWVNVDLNIQDGTTAQSGGGADNDAEGDTLIGIENLIGSND 590
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ L A+ + G D + +
Sbjct: 591 ATHGDVLTGNAANNHLIGLDGDDTLIGGAGNDTLVSGAGAD 631
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 42/338 (12%), Positives = 83/338 (24%), Gaps = 56/338 (16%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + + GY S +++++ + D G G IG
Sbjct: 2445 AGGAGSDLMDGGAGYDMASYSTSASWVDMDLNLQDGVTAQSGGGAANHAAGDTLIG---- 2500
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G + D ++ + A + D +
Sbjct: 2501 ----FEGVIGSNDAAHGDVLTGDDQANMLVGLDGDDSLVGGAGNDTLVGGLGYDTL---- 2552
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFI-QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+G G++ ++ V D+ + + G D +D + +DL +S
Sbjct: 2553 -----EGGDGDDWFQDGVGSYDNTYTGDYLVGGAGIDTVDYSN-SLDVCMVDLTDSWYSF 2606
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ IE+++GS D ++G+ N+ D G G DT
Sbjct: 2607 PNSSYSDAYCDTLVGIENIIGSQWFDSLLGDGGANMIDGGGYWDYILGRGGDDTLL---- 2662
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
D L ++ A + LI
Sbjct: 2663 ------------------GGSDNDTL---------------DGGAGNDFMDGGADNDLLI 2689
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
G D + + +D
Sbjct: 2690 GGAGIDTIQGGTGDDLIHGGADDVVDGGDGFDTFRLED 2727
Score = 44.8 bits (104), Expect = 0.050, Method: Composition-based stats.
Identities = 28/264 (10%), Positives = 63/264 (23%), Gaps = 54/264 (20%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-YIDLNTE-------------SWSSIG 254
+ + G D+ + + ++L + ++
Sbjct: 2440 GDDTLAGGAGSDLMDGGAGYDMASYSTSASWVDMDLNLQDGVTAQSGGGAANHAAGDTLI 2499
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------ 308
G+E + + + G ++++G ++ +GND G G DT
Sbjct: 2500 GFEGVIGSNDAAHGDVLTGDDQANMLVGLDGDDSLVGGAGNDTLVGGLGYDTLEGGDGDD 2559
Query: 309 --------YYAPSYLYKIYRFENAIIVYDANEHKQ----------------------DFL 338
Y + V +N D L
Sbjct: 2560 WFQDGVGSYDNTYTGDYLVGGAGIDTVDYSNSLDVCMVDLTDSWYSFPNSSYSDAYCDTL 2619
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+E + + + ++++ ++ ++ G D G D
Sbjct: 2620 VGIENIIGSQWFDSLLGDGGANMIDGGGYWDYILGRGGDDTLLGGSDNDTLDGGAGNDF- 2678
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAA 422
D L G D
Sbjct: 2679 ---MDGGADNDLLIGGAGIDTIQG 2699
>gi|83311100|ref|YP_421364.1| Type V secretory pathway, adhesin AidA [Magnetospirillum magneticum
AMB-1]
gi|82945941|dbj|BAE50805.1| Type V secretory pathway, adhesin AidA [Magnetospirillum magneticum
AMB-1]
Length = 3730
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 78/272 (28%), Gaps = 13/272 (4%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+T T + ++ + V + D G G T+
Sbjct: 992 VTATSTEASNGSTATTTTSFDVSFSGTAAGNDTLDGGAGNDTLFGGAGNDTLTGGAGADL 1051
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ G + + + + + ++ + +
Sbjct: 1052 LEGGDG----NDVLNYSTDGTWSGGFVSQNVGDTTHAGTNETYTITGDNDSQDVFRGGAG 1107
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ G L + I++I G+D++DLT
Sbjct: 1108 TDTLVMGSGNDALFLDDGYSGSPTGGARIDGIESIVAGEGNDVVDLTSSKYT-------- 1159
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+I G N + + + + G +GNDV+ G S N+ G D DG G DT
Sbjct: 1160 YGDVTIDGGAGNDVLMGNAGNDVIDGGTGNDVLYGASGNDTLRGGDGADTLDGGYGADTI 1219
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
A + L I ++A YD D L
Sbjct: 1220 DAGAGNDLGIIKGGQSAGDNYDGGT-GTDTLR 1250
Score = 57.5 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/413 (9%), Positives = 93/413 (22%), Gaps = 49/413 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFM-EINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ +P + ++ +A G T+ + + + G
Sbjct: 853 GSTAGTAHFGMAAVADSPVLSASNITVDLGAGQAQTLNGTTGNDTLSGGSGNDVVNGSSG 912
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G ++ S + + + T
Sbjct: 913 DDVLYGDGTGSVTVPLNISDRLSDTDGSESLGSVTIGGLPAGASLSAGT----------- 961
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+ + + Q + T + + T T S+
Sbjct: 962 -------HNSDGTWTLTPAQLTGLSVTTTEGTALHLSVTATSTEASNGSTATTTTSFDVS 1014
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+++ G +GND + G + N+ +G D+ +G G D Y
Sbjct: 1015 FSGTA-------AGNDTLDGGAGNDTLFGGAGNDTLTGGAGADLLEGGDGNDVLNYSTDG 1067
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ +N A ++ ++ S +
Sbjct: 1068 TWSGGFVSQNVGDTTHAGTNETYTITG-----------------------DNDSQDVFRG 1104
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D L +G + + + + G+D T+G
Sbjct: 1105 GAGTDTLVMGSGNDALFLDDGYSGSPTGGARIDGIESIVAGEGNDVVDLTSSKYTYGDVT 1164
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
L A ++ + + G D + + +
Sbjct: 1165 IDGGAGNDVLMGNAGNDVIDGGTGNDVLYGASGNDTLRGGDGADTLDGGYGAD 1217
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 34/270 (12%), Positives = 76/270 (28%), Gaps = 19/270 (7%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S H + + + + + + G TI G + G
Sbjct: 3388 SHHGSLVVDADSGSFFYNADDTKWSGTDTFTVQVSDGEGGKATQTISVQVTGGSKGGSGG 3447
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ G ++ N S+ + + G + +
Sbjct: 3448 SGGGHAIGWGNGGGRDESWGSNGSWEVDGAGHSGGGHVTHASDNGSNWSSGWHGVDVGNG 3507
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK-----NYIDLNTE 248
+ S+ Y + T+ + G+D + L + ++I L
Sbjct: 3508 GHAGTGDSIDIAGYNRHDESYRGSGGDTLIGAAGNDYMSLEGGDHAQKISGIDHIQLGDG 3567
Query: 249 SW-----SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD---- 299
++ ++T+A + + + +SG+D+++ + N +GND
Sbjct: 3568 DNVILDMTTTRYDYGDLTVAGGSGHDVIWSASGDDLLVAGNGGNTIHGGAGNDTIVAGAG 3627
Query: 300 -----GSSGLDTFFYYAPSYLYKIYRFENA 324
G G DTF + S +
Sbjct: 3628 SDELMGQEGNDTFLFDFGSGHDTVNGGAGT 3657
>gi|1418215|dbj|BAA13071.1| matrix metalloproteinase, MT2MMP [Homo sapiens]
gi|30582269|gb|AAP35361.1| matrix metalloproteinase 15 (membrane-inserted) [Homo sapiens]
Length = 564
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 48/162 (29%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + W+N+ + + T + E R A W + L F+E
Sbjct: 29 LTGRKWNNHHLTFSIQNYTEKLGWYHS-------MEAVRRAFRVWEQATPLVFQEVPYED 81
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+ +
Sbjct: 82 IRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSST 141
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + N + D +N
Sbjct: 142 DLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDN 183
>gi|325919466|ref|ZP_08181489.1| hemolysin-type calcium-binding protein [Xanthomonas gardneri ATCC
19865]
gi|325550053|gb|EGD20884.1| hemolysin-type calcium-binding protein [Xanthomonas gardneri ATCC
19865]
Length = 790
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/298 (16%), Positives = 83/298 (27%), Gaps = 41/298 (13%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N T A + V G +GNDVV G + ++ GNDV +G G D F
Sbjct: 518 NGTFAGTVSDDLVWGGTGNDVVTGGAGADLIGGGYGNDVLNGGDGSDQLFGGMGDDSLDG 577
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT--ASYEDLIQVIG 376
+ ++ D LS +L A LI G
Sbjct: 578 GDGNDLLL----GGDGNDSLSG------GSGTDRLDGGAGDDVLSVNPQARDSVLIGGTG 627
Query: 377 QDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
D + F +G D ++ Y G+ D + VFG A+ + G+
Sbjct: 628 NDTLNGSWYSDTYLFNKGDGHDTVLETSTYSGAVDKV--VFGEGIAASDVRVLRQGL--- 682
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ + + D + + +G T ++ +G
Sbjct: 683 ------DVVLDLGNGTDSVRLKDWLSGASENDSAGIEQLVFADGTIWTPETLRAMG---- 732
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G+D + + L ++ L AG D
Sbjct: 733 -LTTLGTDAADTLTGW-----------NGNDLLLGGDGNDSLSGGSGTDRLDGGAGDD 778
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/277 (12%), Positives = 73/277 (26%), Gaps = 19/277 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ ++ G+D++ GG + + G + + + +
Sbjct: 518 NGTFAGTVSDDLVWGGTGNDVVT----GGAGADLIGGGYGNDVLNGGDGSDQLFGGMGDD 573
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---------FYYAPSYLYKIYR 320
S+ G GND+++G N+ SG D DG +G D + +
Sbjct: 574 SLDGGDGNDLLLGGDGNDSLSGGSGTDRLDGGAGDDVLSVNPQARDSVLIGGTGNDTLNG 633
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ D + + A + S + D++ +G
Sbjct: 634 SWYSDTYLFNKGDGHDTVLETSTYSGAVDKVVFGEGIAASDVRVLRQGLDVVLDLGNGTD 693
Query: 381 ESMKHFYEFGLSEGRD------ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
+ G SE + D ++ + AA +G
Sbjct: 694 SVRLKDWLSGASENDSAGIEQLVFADGTIWTPETLRAMGLTTLGTDAADTLTGWNGNDLL 753
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
D +L + + L D V
Sbjct: 754 LGGDGNDSLSGGSGTDRLDGGAGDDVLSVNPQARDSV 790
>gi|99081440|ref|YP_613594.1| hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
gi|99037720|gb|ABF64332.1| Hemolysin-type calcium-binding region [Ruegeria sp. TM1040]
Length = 303
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + T+ G+D ++ + G + + + G N
Sbjct: 127 TLGFGDDVINGGRGNDTVSAGAGNDTINGNAGRDQINGHDGDDVLTGGGGRDKLNGGVGN 186
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++ + + +VG +GND + G + ++V +G+DV G +G D F + A + I
Sbjct: 187 DVLSGNAGRDKLVGGTGNDTLSGGADDDVLRGGTGDDVLTGGAGADVFKFRANDHTNVIT 246
Query: 320 RFENAI 325
FE +
Sbjct: 247 DFEVGV 252
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 46/180 (25%), Gaps = 21/180 (11%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ + + G + L++ G + +L + + + I + + G GND
Sbjct: 85 YEDFFAANGRERLNMVFEGADEITSNLGSGL--RMNFQAGDDVITLGFGDDVINGGRGND 142
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V + N+ ++G D +G G D D L
Sbjct: 143 TVSAGAGNDTINGNAGRDQINGHDGDDVL-------------TGGGGRDKLNGGVGNDVL 189
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
S V L A + L G DV F
Sbjct: 190 SG------NAGRDKLVGGTGNDTLSGGADDDVLRGGTGDDVLTGGAGADVFKFRANDHTN 243
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 43/174 (24%), Gaps = 14/174 (8%)
Query: 302 SGLDTFFYYAPSYLYKIYRFENAI-----IVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G DT + L F +V++ + L R+ F
Sbjct: 70 DGADTLVSISDMALSYEDFFAANGRERLNMVFEGADEITSNLGSGLRMNFQAGDDVITLG 129
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
++ + + G D + +G D+ G D L G
Sbjct: 130 FGDDVINGGRGNDTVSAGAGNDTINGNAGRDQINGHDGDDVL----TGGGGRDKLNGGVG 185
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+D + G + L A + L D G D F
Sbjct: 186 NDVLS-----GNAGRDKLVGGTGNDTLSGGADDDVLRGGTGDDVLTGGAGADVF 234
>gi|150377150|ref|YP_001313746.1| hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
gi|150031697|gb|ABR63813.1| Hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
Length = 387
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 81/299 (27%), Gaps = 14/299 (4%)
Query: 200 GSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+L + I + +Y G+D + GG N G +
Sbjct: 6 TNLADTIRGFLADDVIWGYEGDDYLYGDAGNDRI----FGGSGNDFINAGLGNDYAEGGD 61
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYY 310
N + +++ G GND G + N++ G+D G G DT +
Sbjct: 62 GNDRLEGGLGDDTLDGGLGNDTFDGGNGNDIVKGGDGHDQILGGRGHDTIYGGAGEEYID 121
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
A IY + L+ + + + L+ A +
Sbjct: 122 AGDGDDVIYAGSGNDGFNNRINPATGKLTQ-QAVGGGAGNDTIYGEEGNDALKGQAGNDK 180
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ IG D+ + +G D+ +Y + + Y G
Sbjct: 181 VYGGIGDDIVDGGNGDNFLDGGDGNDVLDSEGGIDVAYGGVGKDKIAVGAGNDLAYGDDG 240
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
L ++ + + GKD + + DS ++
Sbjct: 241 DDILSGEAGADILHGGNGNDLIYGGNGNDIVRGDAGKDTLVGEAGSDILWGGADSDRFV 299
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/309 (10%), Positives = 76/309 (24%), Gaps = 10/309 (3%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
M + + +++ G +DV+ G ++ + +GND G SG D F A
Sbjct: 1 MILKGTNLADTIRGFLADDVIWGYEGDDYLYGDAGNDRIFGGSGND--FINAGLGNDYAE 58
Query: 320 RFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + D + + + ++ + G++
Sbjct: 59 GGDGNDRLEGGLGDDTLDGGLGNDTFDGGNGNDIVKGGDGHDQILGGRGHDTIYGGAGEE 118
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
++ G D + + V G Y G +
Sbjct: 119 YIDAGDGDDVIYAGSGNDGFNNRINPATGKLTQQAVGGGAGNDTI--YGEEGNDALKGQA 176
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ + + D G D + G + + +
Sbjct: 177 GNDKVYGGIGDDIVDGGNGDNFLDGGDGNDVLDSEGGIDVAYGGVGKDKIAVGAGNDLAY 236
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
+ G + + ++ + + +AG D +G
Sbjct: 237 GDDGDDILS---GEAGADILHGGNGNDLIYGGNGNDIVRGDAGKDTLVGEAGSD--ILWG 291
Query: 559 YEEGRSITF 567
+ F
Sbjct: 292 GADSDRFVF 300
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 77/287 (26%), Gaps = 13/287 (4%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ D G+G T N + G
Sbjct: 40 FGGSGNDFINAGLGNDYAEGGDGNDRLEGGLGDDTLDGGLGNDTFDGGNGNDIVKGGDGH 99
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G +YG + D+ + Y + + + Q+
Sbjct: 100 DQILGGRGHDTIYGGAGEEYIDAGDGDDVIYAGSGNDGFNNRINPATGKLT------QQA 153
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTES 249
G G+ + K +Y GDD++D GG N + +
Sbjct: 154 VGGGAGNDTIYGEEGNDALKGQAGNDKVYGGIGDDIVDGGNGDNFLDGGDGNDVLDSEGG 213
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G IA + G G+D++ G + ++ +GND+ G +G D
Sbjct: 214 IDVAYGGVGKDKIAVGAGNDLAYGDDGDDILSGEAGADILHGGNGNDLIYGGNGNDIVR- 272
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ + + I++ + + L D +D +
Sbjct: 273 -GDAGKDTLVGEAGSDILWGGADSDRFVFKGTPTLSGQDSVMDFQDG 318
>gi|170739580|ref|YP_001768235.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
gi|168193854|gb|ACA15801.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
Length = 1292
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 52/255 (20%), Positives = 84/255 (32%), Gaps = 37/255 (14%)
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE-----------------GR 435
G+ + FD Y Y DLR++ D A HY+ HG KE G
Sbjct: 37 LGQSVEFDPDFYSRLYPDLRHL--RDAKALLSHYLVHGRKERRFPTRTAYLAHLFTKHGD 94
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
P+ F Y ++DL + + H+ FG E R +S +
Sbjct: 95 LPEGFDPTIYRDLNQDLAALLQEDWEYAA----HYVQFGRVERRRFRRESERGDEAAWPS 150
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
D A H H + GR F ++I + D AP G F+
Sbjct: 151 LVCAEVDDALVAAHLRRHDLMPGRWQQRFDLAQFIFLNAD---WIGAAPATRIQGMLLFA 207
Query: 556 NFGYEEGRSIT----FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
G + + F+P Y ++ + G +H++ +EG LG + +
Sbjct: 208 EQGVDRLAPLNIEDAFDPAFYRANHP-VAASLGDA--DLYRHWL----REGVELGFAPNE 260
Query: 612 FKSVMNLSEKSRDKA 626
L + +
Sbjct: 261 RACTAALIGQGAFPS 275
>gi|397995|gb|AAB36691.1| LktA [Mannheimia haemolytica]
Length = 953
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 72/228 (31%), Gaps = 22/228 (9%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
G G + + EI G G Y +D E + +V + +
Sbjct: 610 TLGDGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKEPEQGSYTVNRF--VES 667
Query: 171 SMMDASFGYCATPMVSDIVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
T +V + ++ + + G Y + K ++ I + +D
Sbjct: 668 GKALHEVTSTHTALVGNREEKIEYRHSNNQHHAG---YYTKDTLKA---VEEIIGTSHND 721
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + + G + TI + + + G G+D++ G + ++
Sbjct: 722 IFKGSKFN-------------DAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFI 768
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
GN + G G+D F + I E + ++ + +D
Sbjct: 769 DGGKGNHLLHGGKGVDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDL 816
Score = 47.1 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 32/161 (19%), Gaps = 41/161 (25%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIV------ 327
V ++ F SG DG G D Y +Y + V
Sbjct: 608 VATLGDGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKEPEQGSYTVNRFVES 667
Query: 328 ------------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ A + +D L VE + K
Sbjct: 668 GKALHEVTSTHTALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSK 727
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + G D K G D
Sbjct: 728 FNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFI 768
>gi|330890709|gb|EGH23370.1| calcium binding hemolysin protein [Pseudomonas syringae pv. mori str.
301020]
Length = 1526
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 57/428 (13%), Positives = 104/428 (24%), Gaps = 15/428 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI-GHALGL 134
+ T D + D G G + + G A
Sbjct: 597 GGAGNDKLAGGAGADTLSGDEGNDLLQGGSGNDTLTGGAGDDVLDGGAGNDRLDGGAGDD 656
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G N+ T + D + + ++ +
Sbjct: 657 TYLFGKGSGQDTLYYVNEARAGKVDTIQLVGLGVSDVSVSRDGYDLVVRVNGTTDTLRVM 716
Query: 195 Y---GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Y G + + I G+D + ID
Sbjct: 717 YHFMGDATSGYQIDRIQFADGNIWGQDTIKIQALLGNDADQYLAGYATDDLID-AGGGDD 775
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G N T+ + +++ G GND++ G + N++ +GNDV DG +G D A
Sbjct: 776 TINGAAGNDTLIGGSGADTLSGEEGNDLLQGGAGNDILNGGAGNDVLDGGAGNDRLDGGA 835
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y + +Y ANE + + V+ + + V ++ + + L
Sbjct: 836 GDDTYLFGKGSGQDTIYYANETRAGKVDQVKLVGLNAADVSVVREGYDLVIRINGTTDTL 895
Query: 372 ----------IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
D E + + S +
Sbjct: 896 RVMYHFMSDATAGYQIDRIEFADGSNWDQSAIKAQVLTSSDAAQVLTGFASDDLIDGGAD 955
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
Y G D +L + L + G D +
Sbjct: 956 DDTLYGGAGQDRLLGGDGADSLNGDEGDDYLNGGAGNDSLAGGSGNDVLDGGAGNDRLDG 1015
Query: 482 TFDSYLYL 489
YL
Sbjct: 1016 GAGDDTYL 1023
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 59/359 (16%), Positives = 107/359 (29%), Gaps = 39/359 (10%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TL G + + + ++ G N +++ T +++ G GND++ G S N+V
Sbjct: 192 DETLTGFASDDVIDGSGGDDTLNGAAGNDSLSGGTGSDTLNGEDGNDLLQGGSGNDVLNG 251
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
S+GNDV DG +G D A +Y + ++Y ANE + + ++ + I
Sbjct: 252 SAGNDVLDGGAGNDRLDGGAGDDIYLFGKGSGQDVIYYANEARTGKVDTIQLVGLNAGDI 311
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+L + D + HF S + +
Sbjct: 312 SISRAGYDLVLRVNGT---------TDSLRVVYHFLSDATSGYQIDRIQFADGNIWGQET 362
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
A ++ +G + A Y A+ D + + + D
Sbjct: 363 IKSLALQGTDADQYLEGYGTDDLIEAGAGDDTVYGAAGNDKLFGNSGDDVVNGDDGDDLV 422
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
G D+ D L L A
Sbjct: 423 QGGS------GNDTLNGGAGNDVLDG-----------------------GTGNDILNGGA 453
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
++ L + AG D + FG G+ + + T D + G +
Sbjct: 454 GNDLLDGGAGNDRLDGGAGDDTYL-FGKGSGQDTIYYANETRTGKVDTIQLVGLGAADI 511
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/390 (13%), Positives = 96/390 (24%), Gaps = 66/390 (16%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + + D+ G G + G
Sbjct: 424 GGSGNDTLNGGAGNDVLDGGTGNDILNGGAGNDLLDGGAGNDRLDGGAGDDTYLFGKGSG 483
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
Y G + + + +S ++ G + V A
Sbjct: 484 QDTIYYANETRTGKVDTIQLVGLGAADISVSRDGSDLVIRVNGTTDSLRVVYHFAGDATS 543
Query: 196 G-------APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
G GS + + S Q + DDL+D GG + +
Sbjct: 544 GYQIDRIQFADGSAWDQEAIKSQVLQGSDADQYLAGYATDDLID----GGAGDDTIVGGA 599
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G T++ + + G SGND + G + ++V +GND DG +G DT+
Sbjct: 600 GNDKLAGGAGADTLSGDEGNDLLQGGSGNDTLTGGAGDDVLDGGAGNDRLDGGAGDDTYL 659
Query: 309 YYAPSYLYKIYRFEN--------------AIIVYDANEHKQDFLSD-------------- 340
+ S +Y + + D +
Sbjct: 660 FGKGSGQDTLYYVNEARAGKVDTIQLVGLGVSDVSVSRDGYDLVVRVNGTTDTLRVMYHF 719
Query: 341 ---------VERLRFADQCI------------------DSVNVKQRSILEYTASYEDLIQ 373
++R++FAD I +++ + +
Sbjct: 720 MGDATSGYQIDRIQFADGNIWGQDTIKIQALLGNDADQYLAGYATDDLIDAGGGDDTING 779
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
G D EG D+
Sbjct: 780 AAGNDTLIGGSGADTLSGEEGNDLLQGGAG 809
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/443 (12%), Positives = 110/443 (24%), Gaps = 33/443 (7%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ SD + + + D G G ++ +
Sbjct: 930 QVLTSSDAAQVLTGFASDDLIDGGADDDTLYGGAGQDRLLGGDGADSLNGDEGDDYLNGG 989
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G +G + G + D F + + D V +
Sbjct: 990 AGNDSLAGGSGNDVLDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYYANESRAGKVDQVKL 1049
Query: 192 QKIYGAPKGSLGNN----------------IYKIEVQQKDSPFIQTIYDSGGD------- 228
+ A + +Y I I + G
Sbjct: 1050 VDLNAADVSVARDGYDLVIRILGTTDTLRVVYHFMGDATAGYQIDRIAFADGGFWDQTAI 1109
Query: 229 -------DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
D TL G + + S+ G N T++ + +++ G GNDV+
Sbjct: 1110 KAQVLQGTEADETLSGTGSDDVIYAAAGDDSVNGGSGNDTLSGGSGADTLNGEDGNDVLN 1169
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + + +GND DG +G D Y + +Y A E + D L V
Sbjct: 1170 GGDGKDSLYGGNGNDQLDGGAGNDMLDGGNGDDTYLFGKGSGQDSIYYAYEGRADKLDTV 1229
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF--YEFGLSEGRDITF 399
+ + + ++ + + L V+ ++ + ++G
Sbjct: 1230 KLIDLNAADVSVRRDGNDLLIRVLGTTDSLR-VVAHFTNDATYGYQVDRIQFADGNSWNQ 1288
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
S + + + G L + L D
Sbjct: 1289 ASIKSAVLQGTDADETLAGTAISDSIDAGAGDDTVNGGSGDDTLSGSKGADTLNGEAGDD 1348
Query: 460 PDLVQVGKDHFSNFGCEEGRFVT 482
L +G D + +
Sbjct: 1349 LLLGGMGNDTLNGGLGNDILDGG 1371
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 65/525 (12%), Positives = 125/525 (23%), Gaps = 61/525 (11%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ SD + + + D G G T+ +
Sbjct: 565 SQVLQGSDADQYLAGYATDDLIDGGAGDDTIVGGAGNDKLAGGAGADTLSGDEGNDLLQG 624
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G G + G + D F + A D +
Sbjct: 625 GSGNDTLTGGAGDDVLDGGAGNDRLDGGAGDDTYLFGKGSGQDTLYYVNEARAGKVDTIQ 684
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ + G S+ + Y + V+ G D L + +
Sbjct: 685 LVGL-GVSDVSVSRDGYDLVVRVN-----------GTTDTLRVMYHFMGDAT---SGYQI 729
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
I + N+ I++++G+ + + G + +++ G+D +G++G DT
Sbjct: 730 DRIQFADGNIWGQDTIKIQALLGNDADQYLAGYATDDLIDAGGGDDTINGAAGNDTLI-- 787
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + E D L IL A +
Sbjct: 788 -----------GGSGADTLSGEEGNDLLQG---------------GAGNDILNGGAGNDV 821
Query: 371 LIQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
L G D + FG G+D + + D + G + +
Sbjct: 822 LDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYYANETRAGKVDQVKLVGLNAADVSVVREG 881
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG--------KDHFSNFGCEEGRF 480
+ + N D + G K
Sbjct: 882 YDLVIRINGTTDTLRVMYHFMSDATAGYQIDRIEFADGSNWDQSAIKAQVLTSSDAAQVL 941
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-------FKALEYIASH 533
F S + D ++G G D +L + +
Sbjct: 942 TGFASDDLIDGGADDDTLYGGAGQDRLLGGDGADSLNGDEGDDYLNGGAGNDSLAGGSGN 1001
Query: 534 EDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDD 578
+ L + AG D + FG G+ + + D
Sbjct: 1002 DVLDGGAGNDRLDGGAGDDTYL-FGKGSGQDTIYYANESRAGKVD 1045
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 62/395 (15%), Positives = 103/395 (26%), Gaps = 45/395 (11%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
D A Y KGS + IY + + G D+ + ++
Sbjct: 467 LDGGAGDDTYLFGKGSGQDTIYYANETRTGKVDTIQLVGLGAADISVSRDGSDLVIRVNG 526
Query: 246 NTESWSSIGGYEKNMTIAQHT-VIESVVGSSGND------VVIGNSANNVFFESSGNDVF 298
T+S + + + T I+ GS+ + V+ G+ A+ + +D+
Sbjct: 527 TTDSLRVVYHFAGDATSGYQIDRIQFADGSAWDQEAIKSQVLQGSDADQYLAGYATDDLI 586
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
DG +G DT A A D LS E
Sbjct: 587 DGGAGDDTIV-------------GGAGNDKLAGGAGADTLSGDE------GNDLLQGGSG 627
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLRNVFG 416
L A + L G D + FG G+D + D + G
Sbjct: 628 NDTLTGGAGDDVLDGGAGNDRLDGGAGDDTYLFGKGSGQDTLYYVNEARAGKVDTIQLVG 687
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ + + N D + + G + +
Sbjct: 688 LGVSDVSVSRDGYDLVVRVNGTTDTLRVMYHFMGDATSGYQIDRIQFADGNI-WGQDTIK 746
Query: 477 EGRFVTFDSYLYLGSY--DDLRNVFGSDRG--------------AAARHYITHGVKEGRN 520
+ D+ YL Y DDL + G D A G +
Sbjct: 747 IQALLGNDADQYLAGYATDDLIDAGGGDDTINGAAGNDTLIGGSGADTLSGEEGNDLLQG 806
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
L A ++ L + AG D +
Sbjct: 807 GAGNDILNGGAGNDVLDGGAGNDRLDGGAGDDTYL 841
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 59/477 (12%), Positives = 110/477 (23%), Gaps = 62/477 (12%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
S+ + D G G T+ + +
Sbjct: 185 VPQSSNADETLTGFASDDVIDGSGGDDTLNGAAGNDSLSGGTGSDTLNGEDGNDLLQGGS 244
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G + G + D + F + A D + +
Sbjct: 245 GNDVLNGSAGNDVLDGGAGNDRLDGGAGDDIYLFGKGSGQDVIYYANEARTGKVDTIQLV 304
Query: 193 KIYGAP----------------KGSLGNNIYKIEVQQKDSPFIQTIYDSGGD-------- 228
+ +Y I I + G+
Sbjct: 305 GLNAGDISISRAGYDLVLRVNGTTDSLRVVYHFLSDATSGYQIDRIQFADGNIWGQETIK 364
Query: 229 ------DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ------------------ 264
D L G + + ++ G N +
Sbjct: 365 SLALQGTDADQYLEGYGTDDLIEAGAGDDTVYGAAGNDKLFGNSGDDVVNGDDGDDLVQG 424
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ +++ G +GNDV+ G + N++ +GND+ DG +G D A Y +
Sbjct: 425 GSGNDTLNGGAGNDVLDGGTGNDILNGGAGNDLLDGGAGNDRLDGGAGDDTYLFGKGSGQ 484
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI---GQDVFE 381
+Y ANE + + ++ + I ++ + + L V G
Sbjct: 485 DTIYYANETRTGKVDTIQLVGLGAADISVSRDGSDLVIRVNGTTDSLRVVYHFAGDATSG 544
Query: 382 SMKHFYEFGLSEGRD---------ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+F D D+ YL Y + G G
Sbjct: 545 YQIDRIQFADGSAWDQEAIKSQVLQGSDADQYLAGYATDDLIDGGAGDDTIV--GGAGND 602
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+ L ++ L + G D + YL
Sbjct: 603 KLAGGAGADTLSGDEGNDLLQGGSGNDTLTGGAGDDVLDGGAGNDRLDGGAGDDTYL 659
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 63/211 (29%), Gaps = 49/211 (23%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+TI E++ G +G+D + GN +++ +GND DG G DT+ + S +
Sbjct: 48 LTITGTEANETLTGGAGHDTLYGNGGDDILEGGAGNDRLDGGYGNDTYVFGKGSGQDTVL 107
Query: 320 RFENAIIVYD------------------------------------ANEHKQDFLSDVER 343
++ D + + + +
Sbjct: 108 AYDPVSTRVDVVKLTGLNSSDVVITRESSDLLIRVKGATDTLRVSNHFINDSTYGYQINQ 167
Query: 344 LRFADQCIDSVNV---------KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
++FAD + S+ L AS + + G D G
Sbjct: 168 IQFADGDVLSLAAINALVPQSSNADETLTGFASDDVIDGSGGDDTLNGAAGNDSLSGGTG 227
Query: 395 RDI----TFDSYLYLGSYDDLRNVFGSDRGA 421
D + L GS +D+ N +
Sbjct: 228 SDTLNGEDGNDLLQGGSGNDVLNGSAGNDVL 258
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/364 (12%), Positives = 94/364 (25%), Gaps = 40/364 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + D G G + N G
Sbjct: 1151 SGGSGADTLNGEDGNDVLNGGDGKDSLYGGNGNDQLDGGAGNDMLDGGNGDDTYLFGKGS 1210
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
Y + + + +S + ++ G + V
Sbjct: 1211 GQDSIYYAYEGRADKLDTVKLIDLNAADVSVRRDGNDLLIRVLGTTDSLRVVAHFTNDAT 1270
Query: 195 YGAPKGS---LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
YG N + + ++ + ++ G +
Sbjct: 1271 YGYQVDRIQFADGNSWNQASIKSAVLQGTDADETLAGTAISDSIDAGAGDDTVNGGSGDD 1330
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG----------- 300
++ G + T+ + ++G GND + G N++ +GND DG
Sbjct: 1331 TLSGSKGADTLNGEAGDDLLLGGMGNDTLNGGLGNDILDGGAGNDRLDGGDGDDTYLFAR 1390
Query: 301 SSGLDTFFY--------------------------YAPSYLYKIYRFENAIIVYDANEHK 334
+G DT +Y L + + + V +
Sbjct: 1391 GAGQDTVYYAYESRIGKLDTVKLTDLNAVDVSVRRDGSDLLILVLGSTDTLRVMSHFTND 1450
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ ++R++FAD + + +L+ + + E L G DV ++ + G
Sbjct: 1451 ATYGYQIDRIQFADGSFWDQSAIKNQVLQGSDADETLSGTGGNDVIDAGAGDDVINGAVG 1510
Query: 395 RDIT 398
D
Sbjct: 1511 NDTL 1514
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/387 (12%), Positives = 96/387 (24%), Gaps = 80/387 (20%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ T S D DV G GK ++ N ++ G G
Sbjct: 1142 NGGSGNDTLSGGSGADTLNGEDGNDVLNGGDGKDSLYGGNGNDQLDGGAG-NDMLDGGNG 1200
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
Y DS + D++ + D + SL
Sbjct: 1201 DDTYLFGKGSGQDSIYYAYEGRADKLDTVKLIDLNAADVSVRRDGNDLLIRVLGTTDSLR 1260
Query: 204 NNIYKIEVQQKDSPFIQTIYDSG--------------GDDLLDLTLIGGVKNYIDLNTES 249
+ + + G G D + + + ID
Sbjct: 1261 VVAHFTNDATYGYQVDRIQFADGNSWNQASIKSAVLQGTDADETLAGTAISDSIDAGAG- 1319
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG--------- 300
++ G + T++ +++ G +G+D+++G N+ GND+ DG
Sbjct: 1320 DDTVNGGSGDDTLSGSKGADTLNGEAGDDLLLGGMGNDTLNGGLGNDILDGGAGNDRLDG 1379
Query: 301 -----------SSGLDTFFY--------------------------YAPSYLYKIYRFEN 323
+G DT +Y L + +
Sbjct: 1380 GDGDDTYLFARGAGQDTVYYAYESRIGKLDTVKLTDLNAVDVSVRRDGSDLLILVLGSTD 1439
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCI------------------DSVNVKQRSILEYT 365
+ V + + ++R++FAD +++
Sbjct: 1440 TLRVMSHFTNDATYGYQIDRIQFADGSFWDQSAIKNQVLQGSDADETLSGTGGNDVIDAG 1499
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLS 392
A + + +G D
Sbjct: 1500 AGDDVINGAVGNDTLTGKAGADTLNGG 1526
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 57/406 (14%), Positives = 111/406 (27%), Gaps = 67/406 (16%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + IY + GDD ++ GG N ++ G + N + +
Sbjct: 1120 DETLSGTGSDDVIYAAAGDD----SVNGGSGNDTLSGGSGADTLNGEDGNDVLNGGDGKD 1175
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDV-FDG-SSGLDTFFY------------------ 309
S+ G +GND + G + N++ +G+D G SG D+ +Y
Sbjct: 1176 SLYGGNGNDQLDGGAGNDMLDGGNGDDTYLFGKGSGQDSIYYAYEGRADKLDTVKLIDLN 1235
Query: 310 --------YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ---------CID 352
L ++ +++ V + + V+R++FAD
Sbjct: 1236 AADVSVRRDGNDLLIRVLGTTDSLRVVAHFTNDATYGYQVDRIQFADGNSWNQASIKSAV 1295
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF------------- 399
L TA + + G D S+G D
Sbjct: 1296 LQGTDADETLAGTAISDSIDAGAGDDTVNGGSGDDTLSGSKGADTLNGEAGDDLLLGGMG 1355
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
+ L G +D+ + + + Y + L
Sbjct: 1356 NDTLNGGLGNDILDGGAGNDRLDGGDGDDTYLFARGAGQDTVYYAYESRIGKLDTVKLTD 1415
Query: 460 PDLVQVGKD-----------HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA- 507
+ V V ++ F +Y Y + D+ A
Sbjct: 1416 LNAVDVSVRRDGSDLLILVLGSTDTLRVMSHFTNDATYGYQIDRIQFADGSFWDQSAIKN 1475
Query: 508 RHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKD 552
+ E + ++ A + + A + +AG D
Sbjct: 1476 QVLQGSDADETLSGTGGNDVIDAGAGDDVINGAVGNDTLTGKAGAD 1521
>gi|148692991|gb|EDL24938.1| matrix metallopeptidase 27 [Mus musculus]
Length = 511
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 52/180 (28%), Gaps = 33/180 (18%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEETSIH-SDIK 80
W Y + Y+ T + P + + AL WSKV LTF S +DI
Sbjct: 106 WRKYSLTYRIMNYTPD--------MTPADVDEAIQKALQVWSKVTPLTFTRISKGVADIM 157
Query: 81 FISSNN----------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
G+ P FD+ + W G+G L A
Sbjct: 158 IAFRTGVHGWCPRHFDGPLGVLGHAFPPGLGLGGDTH--FDEDETWIAKDGEGFNLFLVA 215
Query: 125 LHEIGHALGLMHPGSYNG-GYPVY----GVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
HE GH+LGL H +P Y D Y P S
Sbjct: 216 AHEFGHSLGLSHSNDQTALMFPNYISLDPSKYPLSQDDIDGIQSIYGSPPKVTTKPSGNS 275
>gi|325958660|ref|YP_004290126.1| family 2 glycosyl transferase [Methanobacterium sp. AL-21]
gi|325330092|gb|ADZ09154.1| glycosyl transferase family 2 [Methanobacterium sp. AL-21]
Length = 1008
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDL 571
G +E + + Y+ ++ D+ P + H+ G++EGR+ + F+ +
Sbjct: 271 GYQEIKKNNLLDVGYYLNTYADIRKT-GKDPII------HYIYNGFKEGRNPSREFDAEY 323
Query: 572 YLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
Y ++ D+ + HY +G+KE R
Sbjct: 324 YFENHSDVKK----SKLNPLVHYALYGIKENR 351
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
D YL +Y D+R HYI +G KEGRNP F A Y +H D+ +
Sbjct: 281 LDVGYYLNTYADIRKTGKD----PIIHYIYNGFKEGRNPSREFDAEYYFENHSDVKKS-K 335
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
P + H++ +G +E R
Sbjct: 336 LNPLV------HYALYGIKENR 351
Score = 45.9 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 12/85 (14%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAF 456
D YL +Y D+R HYI +G KEGRNP F A Y +H D+ +
Sbjct: 280 LLDVGYYLNTYADIRK----TGKDPIIHYIYNGFKEGRNPSREFDAEYYFENHSDVKKSK 335
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFV 481
+ H++ +G +E R
Sbjct: 336 LNP-------LVHYALYGIKENRKT 353
Score = 41.3 bits (95), Expect = 0.48, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGS 417
+ Y +Y D+ + G+D H+ G EGR+ + FD+ Y ++ D++
Sbjct: 282 DVGYYLNTYADIRK-TGKDPII---HYIYNGFKEGRNPSREFDAEYYFENHSDVKKS--- 334
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+ HY +G+KE R + ++
Sbjct: 335 -KLNPLVHYALYGIKENRKTHREETEAESKNYSG 367
>gi|254473411|ref|ZP_05086808.1| iron-regulated protein FrpC [Pseudovibrio sp. JE062]
gi|211957527|gb|EEA92730.1| iron-regulated protein FrpC [Pseudovibrio sp. JE062]
Length = 862
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 83/556 (14%), Positives = 136/556 (24%), Gaps = 94/556 (16%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
F E I+F ++ Y Y+ D DV G T LH +G
Sbjct: 263 FSEGQGIQTIRFADAD--YFVLSGYEIMEATFNFTDGDDVIHGGEQGDT------LHGVG 314
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
L + YG D T Y D+++D D
Sbjct: 315 GNDTLYGYAGDDTLIGGYGDDTLEGGSGNDTYKYEYGDGNDTIIDVHG---------DSS 365
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
V ++ + + + + T YD G + + G I
Sbjct: 366 EVNELIIGSGYQPYDVQFSRPSGTDNDDLLLTFYDGGTLLIKNQFSEGQGIQTIRFADAD 425
Query: 250 WSSIGGY----------EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ GY + + I +++ G GND + G + ++ G+D +
Sbjct: 426 HFVLSGYEIMEATFNFTDGDDVIHGGEQGDTLHGVGGNDTLYGYAGDDTLIGGYGDDTLE 485
Query: 300 GSSGLDTFFYYAPSYLYKI-----------------------------YRFENAIIVYDA 330
G SG DT+ Y I +N ++
Sbjct: 486 GGSGNDTYKYEYGDGNDTIIDVHGDSSEVNELVIGSGYQPYDVQFSRPSGADNDDLLLTF 545
Query: 331 NEHKQDFLSDVER---------------------------LRFADQCIDSVNVKQRSILE 363
+ + + F D +Q L
Sbjct: 546 YDGGTLLIKNQFSEGQGIQTIRFADADYFVLSGYEIMEATFNFTDGDDVIHGGEQGDTLY 605
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ L G D G D Y Y D + +V G
Sbjct: 606 GVGGNDTLYGYAGDDTLIGGYGDDTLEGGSGNDTYK--YEYGDGNDTIIDVHGDSSEVNE 663
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
G + S D + D + + + G
Sbjct: 664 LVI-------GSGYQPYDVQFSRPSGTDNDDLLLTFYDGGTLLIKNQFSEGQGIQTIRFA 716
Query: 484 DSYLYLGS-YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
D+ ++ S Y+ + F G H G L A + LI + D
Sbjct: 717 DADYFVLSGYEIMEATFNFTDGDDVIHGGEQG-DTLHGVGGNDTLYGYAGDDTLIGGYGD 775
Query: 543 APDLVQAGKDHFSNFG 558
+G D F G
Sbjct: 776 DTLEGGSGNDTFKFEG 791
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 83/555 (14%), Positives = 148/555 (26%), Gaps = 76/555 (13%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
F E I+F ++ Y Y+ D DV G T LH +G
Sbjct: 116 FSEGQGIQTIRFADAD--YFVLSGYEIMEATFNFTDGDDVIHGGEQGDT------LHGVG 167
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
L + YG D T Y D+++D D
Sbjct: 168 GNDTLYGYAGDDTLIGGYGDDTLEGGSGNDTYKYEYGDGNDTIIDVHG---------DSS 218
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
V ++ + + + + T YD G + + G I
Sbjct: 219 EVNELIIGSGYQPHDVQFSRPSGTDNDDLLLTFYDGGTLLIKNQFSEGQGIQTIRFADAD 278
Query: 250 WSSIGGY----------EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ + GY + + I +++ G GND + G + ++ G+D +
Sbjct: 279 YFVLSGYEIMEATFNFTDGDDVIHGGEQGDTLHGVGGNDTLYGYAGDDTLIGGYGDDTLE 338
Query: 300 GSSGLDTFFYYAPSYLYKI-----------------------------YRFENAIIVYDA 330
G SG DT+ Y I +N ++
Sbjct: 339 GGSGNDTYKYEYGDGNDTIIDVHGDSSEVNELIIGSGYQPYDVQFSRPSGTDNDDLLLTF 398
Query: 331 NEHKQDFLSD-------VERLRFADQC--IDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + + ++ +RFAD + S + +T + + D
Sbjct: 399 YDGGTLLIKNQFSEGQGIQTIRFADADHFVLSGYEIMEATFNFTDGDDVIHGGEQGDTLH 458
Query: 382 SMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAA-----RHYITHGVK 432
+ G D D L GS +D D + +
Sbjct: 459 GVGGNDTLYGYAGDDTLIGGYGDDTLEGGSGNDTYKYEYGDGNDTIIDVHGDSSEVNELV 518
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS- 491
G + S D + D + + + G D+ ++ S
Sbjct: 519 IGSGYQPYDVQFSRPSGADNDDLLLTFYDGGTLLIKNQFSEGQGIQTIRFADADYFVLSG 578
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
Y+ + F G H G L A + LI + D +G
Sbjct: 579 YEIMEATFNFTDGDDVIHGGEQG-DTLYGVGGNDTLYGYAGDDTLIGGYGDDTLEGGSGN 637
Query: 552 DHFSNFGYEEGRSIT 566
D + + +I
Sbjct: 638 DTYKYEYGDGNDTII 652
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 64/430 (14%), Positives = 109/430 (25%), Gaps = 85/430 (19%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
F E I+F ++ + Y+ D DV G T LH +G
Sbjct: 410 FSEGQGIQTIRFADAD--HFVLSGYEIMEATFNFTDGDDVIHGGEQGDT------LHGVG 461
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
L + YG D T Y D+++D D
Sbjct: 462 GNDTLYGYAGDDTLIGGYGDDTLEGGSGNDTYKYEYGDGNDTIIDVHG---------DSS 512
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
V ++ + + + + T YD G + + G I
Sbjct: 513 EVNELVIGSGYQPYDVQFSRPSGADNDDLLLTFYDGGTLLIKNQFSEGQGIQTIRFADAD 572
Query: 250 WSSIGGY----------EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ + GY + + I +++ G GND + G + ++ G+D +
Sbjct: 573 YFVLSGYEIMEATFNFTDGDDVIHGGEQGDTLYGVGGNDTLYGYAGDDTLIGGYGDDTLE 632
Query: 300 GSSGLDTFFYYAPSYLYKI-----------------------------YRFENAIIVYDA 330
G SG DT+ Y I +N ++
Sbjct: 633 GGSGNDTYKYEYGDGNDTIIDVHGDSSEVNELVIGSGYQPYDVQFSRPSGTDNDDLLLTF 692
Query: 331 NEHKQDFLSD-------VERLRF--------------------ADQCIDSVNVKQRSILE 363
+ + + ++ +RF D +Q L
Sbjct: 693 YDGGTLLIKNQFSEGQGIQTIRFADADYFVLSGYEIMEATFNFTDGDDVIHGGEQGDTLH 752
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ L G D G D LY G+ D F D
Sbjct: 753 GVGGNDTLYGYAGDDTLIGGYGDDTLEGGSGNDTFKFEGLYFGN--DTVTDFNVDTEVVQ 810
Query: 424 RHYITHGVKE 433
+ E
Sbjct: 811 LEFGMVTSFE 820
>gi|126640800|ref|YP_001083784.1| iron-regulated protein [Acinetobacter baumannii ATCC 17978]
Length = 896
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/261 (15%), Positives = 76/261 (29%), Gaps = 15/261 (5%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
T D G G+ T++ + + + G
Sbjct: 581 DTLNGTKNNDTLNGGWGNDKLNGGAGQDTLIGGSGNAVMTGG-----DYEKDIYIFQSGH 635
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL------G 203
D ND + A+F V + + V K +G
Sbjct: 636 GQDIINDKSYDWTNLQYFNDVKFEGANFTDAQFLRVGNDL-VIKAFGTDDSVSFKNYLND 694
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
N+ Y + + T D + + L G N + + ++ G + T+
Sbjct: 695 NDSYSRDFNFIFADKTLTTADVMN---IVIPLNGTDGNDVQNGWKGKDNLLGSLGDDTLN 751
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G +GND++ G N++ +GND G G DT + + N
Sbjct: 752 GLAGDDWLEGGAGNDILNGGEGNDLLEGGAGNDTLTGGIGADTAIFKILAGFGNDATGGN 811
Query: 324 AIIVYDANEHKQDFLSDVERL 344
+ + Q ++ L
Sbjct: 812 GVDTWSDFNISQGDKINISEL 832
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/234 (15%), Positives = 67/234 (28%), Gaps = 17/234 (7%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + +++ G+ ND + G N+ +G D G SG Y IY F
Sbjct: 574 IIGTKLDDTLNGTKNNDTLNGGWGNDKLNGGAGQDTLIGGSGN--AVMTGGDYEKDIYIF 631
Query: 322 EN--AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
++ + + + L ++F + +I+ G D
Sbjct: 632 QSGHGQDIINDKSYDWTNLQYFNDVKFE-------GANFTDAQFLRVGNDLVIKAFGTDD 684
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF----GSDRGAAARHYITHGVKEGR 435
S K++ S RD F + D+ N+ G+D + G
Sbjct: 685 SVSFKNYLNDNDSYSRDFNFIFADKTLTTADVMNIVIPLNGTDGNDVQNGWK--GKDNLL 742
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
L +A + L + G D + + +
Sbjct: 743 GSLGDDTLNGLAGDDWLEGGAGNDILNGGEGNDLLEGGAGNDTLTGGIGADTAI 796
Score = 40.5 bits (93), Expect = 0.89, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 54/228 (23%), Gaps = 17/228 (7%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+ K L + L GQD + +
Sbjct: 573 FIIGTKLDDTLNGTKNNDTLNGGWGNDKLNGGAGQDTLIGGSGNAVMTGGDYEKDIYIFQ 632
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
G D+ N D Y EG N A ++ +I AF
Sbjct: 633 S--GHGQDIINDKSYDWTNL--QYFNDVKFEGAN--FTDAQFLRVGNDLVIKAFGTDD-- 684
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF----GSDRGAAARHYITHGVKEG 518
V ++ N R F + D+ N+ G+D + G
Sbjct: 685 -SVSFKNYLNDNDSYSRDFNFIFADKTLTTADVMNIVIPLNGTDGNDVQNGWK--GKDNL 741
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
L +A + L + G D G ++T
Sbjct: 742 LGSLGDDTLNGLAGDDWLEGGAGNDILNGGEGND--LLEGGAGNDTLT 787
>gi|30348960|ref|NP_536701.1| matrix metalloproteinase-28 isoform 1 [Mus musculus]
gi|27461082|gb|AAL57761.1| matrix metalloproteinase-28 variant A precursor [Mus musculus]
gi|56207069|emb|CAI24738.1| matrix metalloproteinase 28 (epilysin) [Mus musculus]
gi|219518500|gb|AAI45050.1| Matrix metallopeptidase 28 (epilysin) [Mus musculus]
Length = 510
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 52/169 (30%), Gaps = 42/169 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHA 208
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD + W +G L HEIGH LGL H P P Y
Sbjct: 209 FLPRRGEAHFDGDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRD 268
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+ D++AVQ +YG P G
Sbjct: 269 ALLSWD---------------------------DVLAVQSLYGKPLGRS 290
>gi|74222651|dbj|BAE42198.1| unnamed protein product [Mus musculus]
Length = 473
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 60/185 (32%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + ++
Sbjct: 113 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAN 172
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 173 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 229
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S + Y P DI +Q
Sbjct: 230 LQHSNNPK---------------SIMYPTYRYLNPST----------FRLSADDIRNIQS 264
Query: 194 IYGAP 198
+YGAP
Sbjct: 265 LYGAP 269
>gi|87312328|ref|ZP_01094423.1| hypothetical protein DSM3645_17926 [Blastopirellula marina DSM
3645]
gi|87284950|gb|EAQ76889.1| hypothetical protein DSM3645_17926 [Blastopirellula marina DSM
3645]
Length = 322
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 54/197 (27%), Gaps = 10/197 (5%)
Query: 204 NNIYKI--EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGY 256
+ IY +Y G D + D TL G I + +I G
Sbjct: 23 DTIYGGGNNDTIFGGRDNDLVYGGSGADTIQGDAGDDTLFGNSGGDIIHGNDGVDTIYGD 82
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + + + G GND++ G + + + G+D G G D
Sbjct: 83 LGDDQLFGDAGEDLIYGGDGNDLLEGGDDADQLYGNQGDDKLVGGDGDD--LLQGGHGED 140
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVI 375
+ V ++ + + + A + L
Sbjct: 141 LLVAGNGDDTVRGGKGGDFLLGNNGDDFLGGGRGNDELYGGGDDDKIRGGAGRDILSGDK 200
Query: 376 GQDVFESMKHFYEFGLS 392
G D+ + + F +
Sbjct: 201 GNDILKGGRGIDTFAFN 217
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/253 (17%), Positives = 76/253 (30%), Gaps = 13/253 (5%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ G+D + G + + +I G N TI + V G SG D + G++
Sbjct: 1 NDGNDTIYGYNGGDLLLG----GKGEDTIYGGGNNDTIFGGRDNDLVYGGSGADTIQGDA 56
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER- 343
++ F +SG D+ G+ G+DT + F +A D L +
Sbjct: 57 GDDTLFGNSGGDIIHGNDGVDTIYGDLGDDQL----FGDAGEDLIYGGDGNDLLEGGDDA 112
Query: 344 --LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
L V +L+ + L+ G D K + G D
Sbjct: 113 DQLYGNQGDDKLVGGDGDDLLQGGHGEDLLVAGNGDDTVRGGKGGDFLLGNNGDDFLGGG 172
Query: 402 YLY--LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
L D + G + + +G A ++ L + A
Sbjct: 173 RGNDELYGGGDDDKIRGGAGRDILSGDKGNDILKGGRGIDTFAFNANGTNSKLDSEGAVP 232
Query: 460 PDLVQVGKDHFSN 472
D+ F
Sbjct: 233 EDVETDYVLDFMK 245
Score = 40.5 bits (93), Expect = 0.93, Method: Composition-based stats.
Identities = 25/199 (12%), Positives = 41/199 (20%), Gaps = 3/199 (1%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ + + G D + + G DI + Y D
Sbjct: 23 DTIYGGGNNDTIFGGRDNDLVYGGSGADTIQGDAGDDTLFGNSGGDIIHGNDGVDTIYGD 82
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
L + Y G D L + L+ D G+D
Sbjct: 83 LGDDQLFGDAGEDLIYGGDGNDLLEGGDDADQLYGNQGDDKLVGGDGDDLLQGGHGEDLL 142
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
++ LG+ D G Y + R L
Sbjct: 143 VAGNGDDTVRGGKGGDFLLGNNGDDFLGGGRGNDEL---YGGGDDDKIRGGAGRDILSGD 199
Query: 531 ASHEDLINAFADAPDLVQA 549
++ L A
Sbjct: 200 KGNDILKGGRGIDTFAFNA 218
>gi|283558386|gb|ACM17705.2| RTX toxin RtxA [Vibrio vulnificus]
Length = 4703
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 58/220 (26%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4326 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI 4385
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4386 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4444
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ S G D+
Sbjct: 4445 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNYNRINASAGNDVVK 4504
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N + A G
Sbjct: 4505 -----LMGYHAVLNGGEGEDHLIAAAISKFSQFNGGEGRD 4539
Score = 38.6 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 71/295 (24%), Gaps = 38/295 (12%)
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
Y +Y D S+++ + + V I A
Sbjct: 6 WRSVEYFFTGNYSADDGNNSIVAIGFGGEIHAYGGDDHVT---VGSIGAKVYTGSGNDTV 62
Query: 202 LGNNIY----------------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+G + Y K + + G +D G +Y
Sbjct: 63 VGGSAYLRVEDTTGHLSVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGA 122
Query: 246 NTESWSSIGGYEKNMTI--AQHTVIESVVGSSGNDVVIGNSANNVFF--------ESSGN 295
+ + G N+T A + GN G A N S G+
Sbjct: 123 AAYNGITRKGLSGNVTFKGAGGYNALWHETNQGNLSFAGAGAGNKLDRTWFNRYQGSRGD 182
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD------VERLRFADQ 349
FDG+ ++ + + + L +ER R
Sbjct: 183 VTFDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTR--QA 240
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQ-DVFESMKHFYEFGLSEGRDITFDSYL 403
+ E Y L + D+ S Y +G +FD+
Sbjct: 241 EDVYAQTRGNIRFEGVGGYNSLYSDVAHGDIHFSGGGAYNTITRKGSGSSFDAQG 295
>gi|27446748|gb|AAL47576.1| matrix metalloproteinase-28 precursor [Mus musculus]
gi|56207071|emb|CAI24740.1| matrix metalloproteinase 28 (epilysin) [Mus musculus]
gi|219520252|gb|AAI45049.1| Mmp28 protein [Mus musculus]
Length = 520
Score = 67.9 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 52/169 (30%), Gaps = 42/169 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHA 208
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD + W +G L HEIGH LGL H P P Y
Sbjct: 209 FLPRRGEAHFDGDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRD 268
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+ D++AVQ +YG P G
Sbjct: 269 ALLSWD---------------------------DVLAVQSLYGKPLGRS 290
>gi|301773298|ref|XP_002922071.1| PREDICTED: macrophage metalloelastase-like [Ailuropoda melanoleuca]
Length = 493
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 64/194 (32%), Gaps = 49/194 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEETSIH-SDIK 80
W FI Y+ + T + P + + A WS V L F + + +DI
Sbjct: 133 WKKRFITYRINNYTPD--------MRPADVDYAIQKAFQVWSDVTPLKFRKINSGEADIM 184
Query: 81 FISSNNGYVCTPRY-------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
++ + + + +FD+A++W KGT L A+HE
Sbjct: 185 IRFASGAHGDFTPFDGRGGVIAHAFGPGPGIGGDTHFDEAEIWTKNY-KGTNLFLVAVHE 243
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H + SY P D
Sbjct: 244 LGHSLGLSHSSDPKA---------------IMFPTYSYVDPNT----------FRLSADD 278
Query: 188 IVAVQKIYGAPKGS 201
+ +Q +YG P+
Sbjct: 279 VRGIQSLYGRPERH 292
>gi|171058980|ref|YP_001791329.1| heme peroxidase [Leptothrix cholodnii SP-6]
gi|170776425|gb|ACB34564.1| Animal haem peroxidase [Leptothrix cholodnii SP-6]
Length = 1650
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 69/277 (24%), Gaps = 26/277 (9%)
Query: 200 GSLGNNIYKIEVQQKDS----PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
++G N Q + D G+ + V + T + G
Sbjct: 1330 TNVGTNTAAFTPAQAQVGQFLRVTVSFTDGQGNLESLTSAPTSVIGDLFGGTAAADVFNG 1389
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
A +++ G +GND + G + N+ +G D G G DTF +
Sbjct: 1390 TAGADNAAGAGAADTLNGQAGNDTLNGGAGNDTLNGGTGADSMTGGGGNDTFLVDDAGDV 1449
Query: 316 YKIYRFENAIIVYDAN-EHKQDFLSDVERLRFADQCIDSVNV------------------ 356
V + + ++ E L +
Sbjct: 1450 VVEGNGGGTDTVQVQSLLNAFTLAANFENLLVVGATNFAGTGNGVGNTLTGGTGGDTLSG 1509
Query: 357 -KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRN 413
+L + L+ G D G D I + + DL
Sbjct: 1510 LGGADVLNGGDGNDVLLGGAGADDLTGGVGADTMTGGAGADNFIYTNVDQSTAALRDLII 1569
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
FG+ + N +F ++
Sbjct: 1570 DFGATDDIDLGAIDANAGTVANNAFSFIGTAAFGANA 1606
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 48/164 (29%), Gaps = 6/164 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + GDD+L + G N + N+ + + G + I
Sbjct: 894 GNDRLEGGAGNDFFFAGEGDDILTDSFGDDNMKGQGGNDVISNSGGFDLLFGGDGKDFIL 953
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G G+D + + N F SGND +G G D ++
Sbjct: 954 GGQGDAESFGGHGDDFIHAGTGINTVFGDSGNDWIEGGDGADLLQGDNGDP-FQQSTIIG 1012
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
++ D S + + + + + Y S
Sbjct: 1013 HDVLLGDGNDDYDSESGDDIMFGTPGTNRAEGMLGFDWVTYARS 1056
Score = 40.9 bits (94), Expect = 0.63, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 7/127 (5%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
I L A + L G D E F EG DI DS+ D+
Sbjct: 869 ILMGGTDGADRLRAGAGDDTLHGDAGNDRLEGGAGNDFFFAGEGDDILTDSFGD----DN 924
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRN---PDAFKALEYIASHEDLINAFADAPDLVQVGK 467
++ G+D + + + +G++ A + +D I+A +
Sbjct: 925 MKGQGGNDVISNSGGFDLLFGGDGKDFILGGQGDAESFGGHGDDFIHAGTGINTVFGDSG 984
Query: 468 DHFSNFG 474
+ + G
Sbjct: 985 NDWIEGG 991
Score = 39.4 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 42/327 (12%), Positives = 67/327 (20%), Gaps = 63/327 (19%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ +A + +DV ++ L
Sbjct: 1351 RVTVSFTDGQGNLESLTSAPTSVIGDLFGGTAAADV--FNGTAGADNAAGAGAADTLNGQ 1408
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A + L G D G D +L + D + G
Sbjct: 1409 AGNDTLNGGAGNDTLNGGTGADSMTGGGGNDT----FLVDDAGDVVVEGNGGGTDTVQVQ 1464
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ + L F + + N T
Sbjct: 1465 SLLNAF-------------------TLAANFENLLVVGATNFAGTGNGVGNTLTGGTGGD 1505
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
L D+ N D L A +DL
Sbjct: 1506 TLSGLGGADVLN----------------------GGDGNDVLLGGAGADDLTGGVGADTM 1543
Query: 546 LVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
AG D+F N D + DL FG+ I G + A
Sbjct: 1544 TGGAGADNFIYT----------NVDQSTAALRDLIIDFGATDD------IDLGAIDANAG 1587
Query: 606 GISGMQFKSVMNLSEKSRDKADLSLSF 632
++ F + + + L SF
Sbjct: 1588 TVANNAFSFIGTAAFGANATGQLRYSF 1614
>gi|332208024|ref|XP_003253096.1| PREDICTED: interstitial collagenase isoform 1 [Nomascus leucogenys]
Length = 470
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 55/191 (28%), Gaps = 33/191 (17%)
Query: 17 LLRDQ-YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI 75
L W + Y+ + T D+ A WS V LTF + S
Sbjct: 103 LTAGNPRWEQTHLTYRIENYTPDLPRADVD-------HAIEKAFKLWSNVTPLTFTKVSE 155
Query: 76 H-SDIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
+DI N + P + +FD+ + W +
Sbjct: 156 GQADIMISFVRGDHQDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYN 212
Query: 120 LSHNALHEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
L A HE+GH+LGL H + D D Y Q+ +
Sbjct: 213 LYRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIG 272
Query: 177 FGYCATPMVSD 187
TP V D
Sbjct: 273 ---PQTPKVCD 280
>gi|307688161|ref|ZP_07630607.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 1383
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 65/490 (13%), Positives = 128/490 (26%), Gaps = 60/490 (12%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + T S D++ + G G + N I L
Sbjct: 643 GGNGNDTINAGSGNDTLNGGSGNDTLSGDIGDDIYIFKKGYGQDIIDNHTATINDIDILK 702
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G V D T + S
Sbjct: 703 MDGIKVEDIDVIRQGKDLILIIKDTKESLTIQGYFNYGTYSLDKIVF------------- 749
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G++ ++ K++ + + I G D LD + G I + SI G
Sbjct: 750 ---DGNVEWDVDKVKEIIRYIEGTEAIDTIQGFDDLDNVIQGYGGADIITGGSNKDSIFG 806
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N I + I+ + G + +D + G+ N++ GND G G D+
Sbjct: 807 GSGNDNIHGNDGIDILSGGNEDDSLYGDDGNDILKGELGNDTLYGGLGNDSL-------- 858
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
D + L V+ IL+ + L+ +
Sbjct: 859 --------------------DGAEGDDTLFGEQGDDSLVSGIGNDILDGGLGNDYLVGGL 898
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D + +++ G+DI ++ + ++ + + + G
Sbjct: 899 GNDTYTFQENY-------GQDII-NNLNVGANNSEVDILNMVGIQSVDVTAVRSGQDLIL 950
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
I + + +A K + D+ + + +L
Sbjct: 951 KVKEKNDSVSIQGYFNYDSAALSNIIFADNVKWDVTKIKEMPITVEGTDNVDTIIGFSEL 1010
Query: 496 RNV----FGSDRGAAARHYIT----HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
+N+ G+D + + T G L+ + L +
Sbjct: 1011 KNIVLGKGGTDIITGSSNADTLDGGLGNDMLAGGAGDDILKGGDGDDSLTGGIGNDILDG 1070
Query: 548 QAGKDHFSNF 557
+ G DH
Sbjct: 1071 EQGNDHLIGS 1080
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 54/418 (12%), Positives = 116/418 (27%), Gaps = 32/418 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D I T + D G +++S + LG
Sbjct: 832 YGDDGNDILKGELGNDTLYGGLGNDSLDGAEGDDTLFGEQGDDSLVSGIGNDILDGGLGN 891
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--------- 185
+ G Y +Y D + + +++
Sbjct: 892 DYLVGG-LGNDTYTFQENYGQDIINNLNVGANNSEVDILNMVGIQSVDVTAVRSGQDLIL 950
Query: 186 -----SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+D V++Q + +L N I+ V+ + + G D +D +
Sbjct: 951 KVKEKNDSVSIQGYFNYDSAALSNIIFADNVKWDVTKIKEMPITVEGTDNVDTIIGFSEL 1010
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
I L I G T+ + + G +G+D++ G ++ GND+ DG
Sbjct: 1011 KNIVLGKGGTDIITGSSNADTLDGGLGNDMLAGGAGDDILKGGDGDDSLTGGIGNDILDG 1070
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
G D + Y + + D ++ +D + +
Sbjct: 1071 EQGNDHLIGSYGNDTYIFRKGYGEERI-----ENYDSGTNS-----SDIDVLKMVGIMPE 1120
Query: 361 ILEYTASYEDLI-QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
++ +DLI + + +++ ++ +G I F + + +
Sbjct: 1121 EVKVLRENDDLILTIKDTNDKVTIQGYFNYGSYAVNKIVF------ENNVEWDITKTKEI 1174
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
T + D F + +D+I L + + G +
Sbjct: 1175 AMLEAIEGTDAGENLTGFDDFNTILMGKGGDDIIQGKNGNDKLFGDDGTDYLDGGSGD 1232
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/312 (16%), Positives = 92/312 (29%), Gaps = 18/312 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ S F I GDD + + GG N I + S+ G +
Sbjct: 171 DTLVGYSDFNNIIKGYDGDDNITGSNYKDELYGGNGNDIIVAGVGDDSLEGGAGIDNLDG 230
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T + + G ND + G N++ SG D+ +G +G DT+ + I +
Sbjct: 231 GTGNDLLNGGYDNDTLKGGDGNDILIGGSGYDILEGGNGNDTYIFKQGFRQDIINNSNTS 290
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM- 383
+ + D L +E L+ +D + + T Y + D
Sbjct: 291 NDIT-----EVDILK-MEGLKESDVRVSRQGQNLILGIRETGEYVKVQGYFNYDSSALKK 344
Query: 384 ---KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
E+ + + R + + + D+ + + G E D
Sbjct: 345 IIFDGNVEWDIEKTRQVAMATTIEGTEGRDIIQGYSD---FNNKIVAKGGDDEVTGSDNN 401
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
L+ A + L + + +G D + + + G D G
Sbjct: 402 DTLDGGAGIDILNGKGGNDTLIGGMGNDSLLGGTGNDSLLGGIGNDILKGEAGDDTLNGG 461
Query: 501 SDRGAAARHYIT 512
Y T
Sbjct: 462 IGNDTLIGGYGT 473
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/324 (12%), Positives = 82/324 (25%), Gaps = 58/324 (17%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + + I TI G+D G N I + G + + ++
Sbjct: 583 FDTKVEGRGGIDTILGDSGNDNFK----GEGGNDILTGGSGNDVLDGGDGDDSLDGGQGD 638
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI---------- 318
+ +VG +GND + S N+ SGND G G D + + I
Sbjct: 639 DLLVGGNGNDTINAGSGNDTLNGGSGNDTLSGDIGDDIYIFKKGYGQDIIDNHTATINDI 698
Query: 319 ----------------------------------------YRFENAIIVYDANEHKQDFL 338
Y + + + D
Sbjct: 699 DILKMDGIKVEDIDVIRQGKDLILIIKDTKESLTIQGYFNYGTYSLDKIVFDGNVEWDVD 758
Query: 339 SDVERLRFADQCIDSVNVKQ----RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
E +R+ + ++ ++++ + + +D ++G
Sbjct: 759 KVKEIIRYIEGTEAIDTIQGFDDLDNVIQGYGGADIITGGSNKDSIFGGSGNDNIHGNDG 818
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
DI Y D N Y G + L + L++
Sbjct: 819 IDILSGGNEDDSLYGDDGNDILKGELGNDTLYGGLGNDSLDGAEGDDTLFGEQGDDSLVS 878
Query: 455 AFADAPDLVQVGKDHFSNFGCEEG 478
+ +G D+ +
Sbjct: 879 GIGNDILDGGLGNDYLVGGLGNDT 902
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 67/556 (12%), Positives = 145/556 (26%), Gaps = 59/556 (10%)
Query: 56 RWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG 115
R + +S + + + D + S+N T + + D G+G
Sbjct: 373 RDIIQGYSDFNN---KIVAKGGDDEVTGSDN--NDTLDGGAGIDILNGKGGNDTLIGGMG 427
Query: 116 KGTILSHNALHEIGHALG---LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
++L + +G L + G D QD +
Sbjct: 428 NDSLLGGTGNDSLLGGIGNDILKGEAGDDTLNGGIGNDTLIGGYGTDIYKFKKGFGQDII 487
Query: 173 MDASFGYCATPMVSDIVAV-----------QKIYGAPKGSLGNNIYKIEVQQKDSPFIQT 221
++++ D+ + Q + K + + + S +
Sbjct: 488 INSNETNAFELDRLDMDGIKEEEVKATREGQDLVLIIKETEESIRIQDYFTYGSSAISKI 547
Query: 222 IYDSGGDD--------LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+D + + ++ + I+ ++ + + G TI + ++ G
Sbjct: 548 KFDDAEWNITKVKEMAMANVIEGTEGDDQINAYSDFDTKVEGRGGIDTILGDSGNDNFKG 607
Query: 274 SSGNDVVIGNS------------------ANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
GND++ G S +++ +GND + SG DT S
Sbjct: 608 EGGNDILTGGSGNDVLDGGDGDDSLDGGQGDDLLVGGNGNDTINAGSGNDTL--NGGSGN 665
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ I + QD + + + +K I + ++ +
Sbjct: 666 DTLSGDIGDDIYIFKKGYGQDIIDNHTATINDIDILKMDGIKVEDIDVIRQGKDLILIIK 725
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
+++ ++ +G I FD + D+ YI
Sbjct: 726 DTKESLTIQGYFNYGTYSLDKIVFDG----------NVEWDVDKVKEIIRYIEGTEAIDT 775
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
I + + G N +G + Y D
Sbjct: 776 IQGFDDLDNVIQGYGGADIITGGSNKDSIFGGSGNDNIHGNDGIDILSGGNEDDSLYGDD 835
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
N Y G + L + L++ + G D+
Sbjct: 836 GNDILKGELGNDTLYGGLGNDSLDGAEGDDTLFGEQGDDSLVSGIGNDILDGGLGNDYLV 895
Query: 556 NFGYEEGRSITFNPDL 571
G + TF +
Sbjct: 896 --GGLGNDTYTFQENY 909
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 66/489 (13%), Positives = 133/489 (27%), Gaps = 62/489 (12%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
I + +D G+G T+ S + G G +Y Y
Sbjct: 20 DGNDTLIGTEGSDTLYGGLGDDTLKSLGGNDILEGGAGTD-ILEGGSGNDIYIFKKGYRE 78
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
D+ + S + +D++ + ++ AV++ I+ E +
Sbjct: 79 DTIINSTL-----EDNISEIDTLKMLGITEDEVKAVRE---GQDLR----IFVKETGEGV 126
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV-GS 274
Y S D + S+I G E N T+ ++ +++ G
Sbjct: 127 KIKDYFNYGSSAIDKIVFEGNVEWDIAKTKEKAMLSAIEGTEVNDTLVGYSDFNNIIKGY 186
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G+D + G++ + + +GND+ G D+ + + + ++ +
Sbjct: 187 DGDDNITGSNYKDELYGGNGNDIIVAGVGDDSL--EGGAGIDNLDGGTGNDLL--NGGYD 242
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D L IL + Y+ L G D + + F + ++
Sbjct: 243 NDTLKG---------------GDGNDILIGGSGYDILEGGNGNDTYIFKQGFRQDIINNS 287
Query: 395 R------DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI-- 446
++ L D + G + R + +G AL+ I
Sbjct: 288 NTSNDITEVDILKMEGLKESDVRVSRQGQNLILGIRETGEYVKVQGYFNYDSSALKKIIF 347
Query: 447 --------ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ A + +S+F + D + D L
Sbjct: 348 DGNVEWDIEKTRQVAMATTIEGTEGRDIIQGYSDFNNKIVAKGGDDEVTGSDNNDTLDGG 407
Query: 499 FGSDRGAAA-------------RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
G D G L+ A + L +
Sbjct: 408 AGIDILNGKGGNDTLIGGMGNDSLLGGTGNDSLLGGIGNDILKGEAGDDTLNGGIGNDTL 467
Query: 546 LVQAGKDHF 554
+ G D +
Sbjct: 468 IGGYGTDIY 476
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 36/265 (13%), Positives = 78/265 (29%), Gaps = 32/265 (12%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N T+ +++ G G+D + N++ +G D+ +G SG D + +
Sbjct: 19 LDGNDTLIGTEGSDTLYGGLGDDTLKSLGGNDILEGGAGTDILEGGSGNDIYIFKKGYRE 78
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV-------NVKQRSILEYTASY 368
I + + + K +++ E + + VK + Y +S
Sbjct: 79 DTIINSTLEDNISEIDTLKMLGITEDEVKAVREGQDLRIFVKETGEGVKIKDYFNYGSSA 138
Query: 369 ED--------------------LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
D L + G +V +++ + +F D+
Sbjct: 139 IDKIVFEGNVEWDIAKTKEKAMLSAIEGTEVNDTLVGYSDFNNIIKGYDGDDNITGSNYK 198
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
D+L G+D A G L+ ++ L + + G D
Sbjct: 199 DELYGGNGNDIIVA-----GVGDDSLEGGAGIDNLDGGTGNDLLNGGYDNDTLKGGDGND 253
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYD 493
+ + Y+
Sbjct: 254 ILIGGSGYDILEGGNGNDTYIFKQG 278
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 68/500 (13%), Positives = 124/500 (24%), Gaps = 66/500 (13%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ S+ I +G + + ++ D G + + L
Sbjct: 795 ITGGSNKDSIFGGSG-NDNIHGNDGIDILSGGNEDDSLYGDDGNDILKGELGNDTLYGGL 853
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G ++G D S++S Y + +D Q
Sbjct: 854 GNDSLDGAEGDDTLFGEQGD-------DSLVSGIGNDILDGGLGNDYLVGGLGNDTYTFQ 906
Query: 193 KIYG---APKGSLG-NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ YG ++G NN + + G DL+ I
Sbjct: 907 ENYGQDIINNLNVGANNSEVDILNMVGIQSVDVTAVRSGQDLILKVKEKNDSVSI---QG 963
Query: 249 SWSSIGGYEKNMTIAQHTVIE---------SVVGSSGNDVVIG-NSANNVFFESSGNDVF 298
++ N+ A + + +V G+ D +IG + N+ G D+
Sbjct: 964 YFNYDSAALSNIIFADNVKWDVTKIKEMPITVEGTDNVDTIIGFSELKNIVLGKGGTDII 1023
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
GSS DT + I+ D
Sbjct: 1024 TGSSNADTL--DGGLGNDMLAGGAGDDILKGG-----------------DGDDSLTGGIG 1064
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF--- 415
IL+ + LI G D + K + E R +DS D L+ V
Sbjct: 1065 NDILDGEQGNDHLIGSYGNDTYIFRKGY-----GEERIENYDSGTNSSDIDVLKMVGIMP 1119
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ + +K+ + + S+ F + + +
Sbjct: 1120 EEVKVLRENDDLILTIKDTNDKVTIQGYFNYGSYAVNKIVFENNVEWDITKTKEIAMLEA 1179
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
EG + + L G D + L +
Sbjct: 1180 IEGTDAGENLTGFDDFNTILMGKGGDDIIQGK--------------NGNDKLFGDDGTDY 1225
Query: 536 LINAFADAPDLVQAGKDHFS 555
L D +G D +
Sbjct: 1226 LDGGSGDDSLFGGSGNDTYI 1245
Score = 38.6 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 63/262 (24%), Gaps = 48/262 (18%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
D + + L + L + G D+ E G DI Y
Sbjct: 20 DGNDTLIGTEGSDTLYGGLGDDTLKSLGGNDILEGGAGTDILEGGSGNDIYIFKKGYRED 79
Query: 408 Y------DDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-----------KALEYIASHE 450
+D + + + V+EG++ F Y +S
Sbjct: 80 TIINSTLEDNISEIDTLKMLGITEDEVKAVREGQDLRIFVKETGEGVKIKDYFNYGSSAI 139
Query: 451 D--------------------LINAFADAPDLVQVGKDHFSNF-----GCEEGRFVTFDS 485
D L + VG F+N G + +
Sbjct: 140 DKIVFEGNVEWDIAKTKEKAMLSAIEGTEVNDTLVGYSDFNNIIKGYDGDDNITGSNYKD 199
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
LY G+ +D+ D G+ L ++ L +
Sbjct: 200 ELYGGNGNDIIVAGVGDDSLE----GGAGIDNLDGGTGNDLLNGGYDNDTLKGGDGNDIL 255
Query: 546 LVQAGKDHFSNFGYEEGRSITF 567
+ +G D G + F
Sbjct: 256 IGGSGYD--ILEGGNGNDTYIF 275
>gi|302875677|ref|YP_003844310.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578534|gb|ADL52546.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 2125
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 66/193 (34%), Gaps = 43/193 (22%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ I G +++ I +++ G G+D +IG N++ + +G+D+ G G DT+
Sbjct: 559 GDNIIYGSDQDDIIFGFGGDDTIYGYGGDDQLIGGDGNDILYGGTGSDLLAGDEGSDTYI 618
Query: 309 YYAPSYLYKIYRFENAIIVYD------------------ANEHK---------------- 334
+ + I F+++ D N+
Sbjct: 619 FKKGDGMDFISEFDSSGKDIDTVKITDGILAKDVMLKRYGNDLGIEVKGTEDILIIMDYF 678
Query: 335 QDFLSDVERLRFADQC---------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D VE++ F D I + +++ T + LI D F+ +
Sbjct: 679 VDSACQVEKIIFDDGTALDGGQIEVIVNGGGDVINVITGTDGNDTLIGTDKIDRFDGLTG 738
Query: 386 FYEFGLSEGRDIT 398
F +G DI
Sbjct: 739 NDTFIGDKGNDIY 751
Score = 53.6 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 54/387 (13%), Positives = 106/387 (27%), Gaps = 71/387 (18%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ ++ + GS+G+D++ S N++ GND GS+G DT+ + + I F
Sbjct: 280 LDGTEGVDIITGSTGDDIIYAYSGNDIIDGKGGNDYVTGSTGNDTYIFNKGYGVLTIDDF 339
Query: 322 ENAIIVYDANEHKQDFL---------------------------------------SDVE 342
+ + D + L + E
Sbjct: 340 DTTVGNMDTIKFGDGILPENILFVRVDKNLEITIKGSSDKIIIKDYFDVNFDINVNTRFE 399
Query: 343 RLRFADQCIDS-----------VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
++ FA+ + + IL + ++G D F K +
Sbjct: 400 KIEFANGVVWDSTIIVSQRVYTIGTSDDDILNGIDKVDIFDGLLGNDTFIGGKGNDIYIY 459
Query: 392 SE--GRDITFDSYLYLGSYDDLRNVFGSDRGAA----ARHYITHGVKEGRNPDAFKALEY 445
+ G D+ + G+ D + G D + +KE +
Sbjct: 460 NLNTGIKTIKDNDITGGNVDTIEFGVGIDPKNIVFTRVGDNLEISIKESSGKVIVENYYI 519
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ I FAD + +G + + D +FG
Sbjct: 520 GIENHIEIIKFADGTIWNDERINKQPVVIRGQGEIHGMEGDNIIYGSDQDDIIFGFGGDD 579
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
Y L ++ L G D + +++G +
Sbjct: 580 TIYGYGGD-----------DQLIGGDGNDILYGGTGSDLLAGDEGSDTYI---FKKGDGM 625
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQ 592
F + + D+ V +D A
Sbjct: 626 DFISEFDSSG-KDIDTVKITDGILAKD 651
Score = 53.3 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 55/173 (31%), Gaps = 5/173 (2%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G + I + + ++ G D + N++ G D +G+ G D
Sbjct: 1911 GSNGNDILTGSAVDDEIYSYGGNDVIIALDGADNIYSAEGNDILDGGIGTDNLNGAEGSD 1970
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL--- 362
T+ + I+ F++ D + + + + + + + IL
Sbjct: 1971 TYIFKKGYGEDFIFEFDDTGKAVDTVKLGEGIVQSDLKFIKDGENLQISIGNTKDILTVV 2030
Query: 363 --EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
Y+ + G ++G +T+ + + D+ N
Sbjct: 2031 GYYSDPGYKVEQIEFANGTIGVLGEININGTTDGNVVTYIKGSIVDTEVDINN 2083
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 61/442 (13%), Positives = 113/442 (25%), Gaps = 103/442 (23%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW--SSIGGYE 257
G+ GN+ Y T G D + +N I + I G
Sbjct: 1536 GNKGNDTYIFNKGTGIKIIEDTDVTVGNIDTIKFGEGITQENIIFGRAGNNLEIVIKGTS 1595
Query: 258 K----------NMTIAQHTVIESV--------------------VGSSGNDVVIGNSANN 287
+ I + IE + +G+ GND + G +
Sbjct: 1596 DKVIVKNYFVVDYDINISSAIEKIEFEGGVVWDSTIIASQVIYILGTDGNDSLSGTDKAD 1655
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSY----LYKIYRFENAIIVYDA------------- 330
+F GND F G++G D + + + S N +
Sbjct: 1656 IFNGYLGNDTFIGNNGNDVYLFESNSGVKIIEDSDETVGNIDTIRFGKGIAKENILFGRA 1715
Query: 331 ----------------------NEHKQDFLSDVERLRFADQCIDSVNVKQRSILE--YTA 366
++ + + +E++ FAD I ++ T
Sbjct: 1716 GNNLEIVIKGSNDKVIIKNYFIADYDVNISNTIEKIEFADGAIWDATTIASQVIYILGTD 1775
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----------DSYLYLGSYDDLRNVF 415
+ L D+F F +G D+ D+ G+ D +R
Sbjct: 1776 GNDSLNGTDKADIFNGQLGNDYFSGGKGNDVYLFELNSGIKTIEDNDGTDGNIDTIRFGS 1835
Query: 416 G--------SDRGAAARHYITHGVKEGRNPDAFKALEYIASHE-----DLINAFADAPDL 462
I + + F+ I+ + + N +
Sbjct: 1836 KILPEDIEFVRIENNLEVTIKGSSDKVIIKNYFENEYEISLNNKIEKIEFSNGIVWDETI 1895
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
+ H S G D D++ + G+D A G + +
Sbjct: 1896 ISNQPIHVSGQEYLSG-SNGNDILTGSAVDDEIYSYGGNDVIIALD-----GADNIYSAE 1949
Query: 523 AFKALEYIASHEDLINAFADAP 544
L+ ++L A
Sbjct: 1950 GNDILDGGIGTDNLNGAEGSDT 1971
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 41/168 (24%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY----------------- 314
+G+ GND + G +++ GND+ G G DT+ + +
Sbjct: 848 IGTDGNDEIHGTGKDDIIDGHLGNDILIGGKGNDTYIFNLGTGIKIIEDIDVTIGNIDTI 907
Query: 315 ---------LYKIYRFENAIIVYDANEHKQDFLSD-------------VERLRFADQCID 352
R +N + + + + + +ER+ F +
Sbjct: 908 KFGTGIKPENIVFVRVDNNLEITIIGSSDKIIIKNYFDIDFNVKITNIIERIEFVGGIVW 967
Query: 353 SVNVKQRSILEYTASYED--LIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+++ Q I+ S D LI IG D+F+ F +G D
Sbjct: 968 DIDIIQSQIVHLIGSDNDDKLIGTIGVDIFDGHLGKDIFVGGKGNDTY 1015
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 50/367 (13%), Positives = 107/367 (29%), Gaps = 54/367 (14%)
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
Y G + D ++ + + + ++ + + I + G
Sbjct: 1110 YTLGTDKDDTLTGTDKDDIFDGLLGNDIFIGNKGNDTYIFNKGTGIKIIEDIDITVGNID 1169
Query: 200 G-SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT--ESWSSIGGY 256
G I + I G D + + + I++ E GG
Sbjct: 1170 TIKFGEGILPGNIIFVRVDNNLEITIKGSADKVIIKNYFDIDLDINITNKIEKIIFHGGV 1229
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-- 314
+ TI VI + +G++GND + G +++F GND F G+ G DT+ + +
Sbjct: 1230 IWDETIIASQVIYT-IGTNGNDTLTGTVKDDIFDGLLGNDTFIGNKGNDTYIFNLGTGIK 1288
Query: 315 ------------------------LYKIYRFENAIIVYDANEHKQDFLSD---------- 340
R +N + + + + +
Sbjct: 1289 IIEDIDITVGNIDTIRFGEGVLPGNVIFVRVDNNLEIVIKGSTDKIIIKNYFVIDYDVNI 1348
Query: 341 ---VERLRFADQ-----------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+E++ F I ++ + L T + ++G D+F K
Sbjct: 1349 TNRIEKIEFFGGITWDIDVIAKQLIYTLGTDKDDTLTGTDKDDIFDGLLGNDIFIGNKGN 1408
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
+ ++G I + + + FG ++ G I
Sbjct: 1409 DTYIFNKGTGIKIIEDIDITVGNIDTIKFGEGILPGNILFVHVGSNLEIIIKGSNDKVII 1468
Query: 447 ASHEDLI 453
++ D+
Sbjct: 1469 KNYFDVD 1475
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 32/269 (11%), Positives = 71/269 (26%), Gaps = 73/269 (27%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE--------SWSSIG 254
GN+ Y + G D + N I + + +
Sbjct: 1011 GNDTYIFNLGTGIKIIEDIDITVGNIDTIRFGEGVLPGNIIFVRVDNNLEIVIKGSTDKI 1070
Query: 255 GYEKNMTIAQHTVIESVV------------------------GSSGNDVVIGNSANNVFF 290
+ I I + + G+ +D + G +++F
Sbjct: 1071 IIKNYFVIDYDVNITNRIEKIEFFGGITWDIDVIAKQLIYTLGTDKDDTLTGTDKDDIFD 1130
Query: 291 ESSGNDVFDGSSGLDTFFYYAPS--------------------------YLYKIYRFENA 324
GND+F G+ G DT+ + + R +N
Sbjct: 1131 GLLGNDIFIGNKGNDTYIFNKGTGIKIIEDIDITVGNIDTIKFGEGILPGNIIFVRVDNN 1190
Query: 325 IIVYDANEHKQDFLSD-------------VERLRFADQCIDSVNVKQRSILEYTA--SYE 369
+ + + + + +E++ F I + ++ +
Sbjct: 1191 LEITIKGSADKVIIKNYFDIDLDINITNKIEKIIFHGGVIWDETIIASQVIYTIGTNGND 1250
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
L + D+F+ + F ++G D
Sbjct: 1251 TLTGTVKDDIFDGLLGNDTFIGNKGNDTY 1279
Score = 45.2 bits (105), Expect = 0.034, Method: Composition-based stats.
Identities = 43/342 (12%), Positives = 82/342 (23%), Gaps = 48/342 (14%)
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
+ D+ G I +++ I G + G
Sbjct: 280 LDGTEGVDIITGSTGDDIIYAYSGNDIIDGKGGNDYVTGSTGNDTYIFNKGYGVLTIDDF 339
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ 220
M D + D I G+ + + + + + +
Sbjct: 340 DTTVGNMDTIKFGDGILPENILFVRVDKNLEITIKGSSDKIIIKDYFDVNFDINVNTRFE 399
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
I + G ++ I T + G +K ++ +G GND+
Sbjct: 400 KIEFANGVVWDSTIIVSQRVYTI--GTSDDDILNGIDKVDIFDGLLGNDTFIGGKGNDIY 457
Query: 281 IGNSA-------NNVFFESSGNDVFDGSSGLD--TFFYYAPSYLYKIYRFENAIIVYDAN 331
I N +N + D + G+D + +I E++ V N
Sbjct: 458 IYNLNTGIKTIKDNDITGGN-VDTIEFGVGIDPKNIVFTRVGDNLEISIKESSGKVIVEN 516
Query: 332 EHKQDFLSDVERLRFADQCI-----------------------------------DSVNV 356
+ + +E ++FAD I
Sbjct: 517 YY-IGIENHIEIIKFADGTIWNDERINKQPVVIRGQGEIHGMEGDNIIYGSDQDDIIFGF 575
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + LI G D+ EG D
Sbjct: 576 GGDDTIYGYGGDDQLIGGDGNDILYGGTGSDLLAGDEGSDTY 617
Score = 45.2 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 47/194 (24%), Gaps = 51/194 (26%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I V E + GS+G D + N++ G D+ G +G D + + I
Sbjct: 138 IVGTDVNEWIEGSTGKDDIEARGGNDIIDGRGGGDLSKGGTGSDIYIFNKGYGELIIEET 197
Query: 322 ENAIIVYDANEHK----------------------------------QDFLSDVERLRFA 347
I D +D +E + F
Sbjct: 198 AETIGNIDKIRFGKGINPDDVVFNKEGLNLIITIKGTTDKIVIVDYYKDLSLRIEEIDFF 257
Query: 348 DQCI-----------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
I + I+ + + + G D+ +
Sbjct: 258 GGVIWNKDDINARPVYILGSGKLDGTEGVDIITGSTGDDIIYAYSGNDIIDGKGGNDYVT 317
Query: 391 LSEGRDITFDSYLY 404
S G D + Y
Sbjct: 318 GSTGNDTYIFNKGY 331
Score = 44.4 bits (103), Expect = 0.064, Method: Composition-based stats.
Identities = 45/337 (13%), Positives = 102/337 (30%), Gaps = 56/337 (16%)
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
Y G D ++ + + ++ + + I + G
Sbjct: 1242 YTIGTNGNDTLTGTVKDDIFDGLLGNDTFIGNKGNDTYIFNLGTGIKIIEDIDITVGNID 1301
Query: 200 G-SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT--ESWSSIGGY 256
G + V I G D + + + +++ E GG
Sbjct: 1302 TIRFGEGVLPGNVIFVRVDNNLEIVIKGSTDKIIIKNYFVIDYDVNITNRIEKIEFFGGI 1361
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-- 314
++ + +I ++ G+ +D + G +++F GND+F G+ G DT+ + +
Sbjct: 1362 TWDIDVIAKQLIYTL-GTDKDDTLTGTDKDDIFDGLLGNDIFIGNKGNDTYIFNKGTGIK 1420
Query: 315 ---------------------------------LYKIYRFENAIIVYDANEHKQDFLSDV 341
+I + V N D+ ++
Sbjct: 1421 IIEDIDITVGNIDTIKFGEGILPGNILFVHVGSNLEIIIKGSNDKVIIKNYFDVDYNVNI 1480
Query: 342 ----ERLRFADQ-----------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
E++ F I ++ + L T + ++G D+F K
Sbjct: 1481 TNRIEKIEFFGGITWDIDVIAKQLIYTLGTDKDDTLTGTDKDDIFDGLLGNDIFVGNKGN 1540
Query: 387 YEFGLSEGR--DITFDSYLYLGSYDDLRNVFGSDRGA 421
+ ++G I D+ + +G+ D ++ G +
Sbjct: 1541 DTYIFNKGTGIKIIEDTDVTVGNIDTIKFGEGITQEN 1577
Score = 44.4 bits (103), Expect = 0.071, Method: Composition-based stats.
Identities = 42/345 (12%), Positives = 91/345 (26%), Gaps = 66/345 (19%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
GG ++ + +I ++ G+ +D + G +++F GND+F G+ G DT+ +
Sbjct: 1489 FFGGITWDIDVIAKQLIYTL-GTDKDDTLTGTDKDDIFDGLLGNDIFVGNKGNDTYIFNK 1547
Query: 312 PSY----LYKIYRFENAIIVYDAN-----------------------------------E 332
+ N + +
Sbjct: 1548 GTGIKIIEDTDVTVGNIDTIKFGEGITQENIIFGRAGNNLEIVIKGTSDKVIVKNYFVVD 1607
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILE--YTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + S +E++ F + + ++ T + L D+F F
Sbjct: 1608 YDINISSAIEKIEFEGGVVWDSTIIASQVIYILGTDGNDSLSGTDKADIFNGYLGNDTFI 1667
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
+ G D+ S ++ + SD I G + IA
Sbjct: 1668 GNNGNDVYL-----FESNSGVKIIEDSDETVGNIDTIRFG-------------KGIAKEN 1709
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
L + ++V G + + + + A++
Sbjct: 1710 ILFGRAGNNLEIVIKGSNDKVIIKNYFIADYDVNISNTIEKIEFADGAIWDATTIASQVI 1769
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G D +L + + G D +
Sbjct: 1770 YILG------TDGNDSLNGTDKADIFNGQLGNDYFSGGKGNDVYL 1808
Score = 40.2 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 57/182 (31%), Gaps = 50/182 (27%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY----------- 314
+ I ++GS +D +IG ++F G D+F G G DT+ + +
Sbjct: 974 SQIVHLIGSDNDDKLIGTIGVDIFDGHLGKDIFVGGKGNDTYIFNLGTGIKIIEDIDITV 1033
Query: 315 ---------------LYKIYRFENAIIVYDANEHKQDFLSD-------------VERLRF 346
R +N + + + + + +E++ F
Sbjct: 1034 GNIDTIRFGEGVLPGNIIFVRVDNNLEIVIKGSTDKIIIKNYFVIDYDVNITNRIEKIEF 1093
Query: 347 ADQ-----------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
I ++ + L T + ++G D+F K + ++G
Sbjct: 1094 FGGITWDIDVIAKQLIYTLGTDKDDTLTGTDKDDIFDGLLGNDIFIGNKGNDTYIFNKGT 1153
Query: 396 DI 397
I
Sbjct: 1154 GI 1155
Score = 40.2 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 58/469 (12%), Positives = 125/469 (26%), Gaps = 96/469 (20%)
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
+ D + Y ++ + G S GN+ Y G D
Sbjct: 292 STGDDIIYAYSGNDIIDGKGGNDYVTG----STGNDTYIFNKGYGVLTIDDFDTTVGNMD 347
Query: 230 LLDLTLIGGVKN------------YIDLNTESWSSIGGYEKNMTIAQHTV---IESVVGS 274
+ +N I +++ ++ N I +T IE G
Sbjct: 348 TIKFGDGILPENILFVRVDKNLEITIKGSSDKIIIKDYFDVNFDINVNTRFEKIEFANGV 407
Query: 275 SGNDVVI--------GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ +I G S +++ D+FDG G DTF + +Y
Sbjct: 408 VWDSTIIVSQRVYTIGTSDDDILNGIDKVDIFDGLLGNDTFIGGKGNDIYIYNLNTGIKT 467
Query: 327 VYDANEHK--QDFL-----------------------------------------SDVER 343
+ D + D + + +E
Sbjct: 468 IKDNDITGGNVDTIEFGVGIDPKNIVFTRVGDNLEISIKESSGKVIVENYYIGIENHIEI 527
Query: 344 LRFADQCI-----------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
++FAD I + ++ +I+ + + + G D
Sbjct: 528 IKFADGTIWNDERINKQPVVIRGQGEIHGMEGDNIIYGSDQDDIIFGFGGDDTIYGYGGD 587
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
+ +G DI + D + + +I+ G++ D K + I
Sbjct: 588 DQLIGGDGNDILYGGTGSDLLAGDEGSDTYIFKKGDGMDFISEFDSSGKDIDTVKITDGI 647
Query: 447 ASHEDLINAFADAPDLVQVGKD------HFSNFGCEEGRFVTFDSYLYLGSYD-DLRNVF 499
+ + ++ + + + G + + + + FD L ++
Sbjct: 648 LAKDVMLKRYGNDLGIEVKGTEDILIIMDYFVDSACQVEKIIFDDGTALDGGQIEVIVNG 707
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
G D T G D + + ++ I + ++
Sbjct: 708 GGDVINVIT--GTDGNDTLIGTDKIDRFDGLTGNDTFIGDKGNDIYVIN 754
Score = 37.8 bits (86), Expect = 6.6, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 62/240 (25%), Gaps = 20/240 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE--SWSSIGGYEKN-MTIAQH 265
+ G+D G +LN+ + G + N TI
Sbjct: 1776 GNDSLNGTDKADIFNGQLGNDYFSG-GKGNDVYLFELNSGIKTIEDNDGTDGNIDTIRFG 1834
Query: 266 TVI--------------ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ I E + S + V+I N N +E S N+ + + +
Sbjct: 1835 SKILPEDIEFVRIENNLEVTIKGSSDKVIIKNYFENE-YEISLNNKIEKIEFSNGIVWDE 1893
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYED 370
+ + +N + S V+ ++ + + + +
Sbjct: 1894 TIISNQPIHVSGQEYLSGSNGNDILTGSAVDDEIYSYGGNDVIIALDGADNIYSAEGNDI 1953
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L IG D + + +G F G + +I G
Sbjct: 1954 LDGGIGTDNLNGAEGSDTYIFKKGYGEDFIFEFDDTGKAVDTVKLGEGIVQSDLKFIKDG 2013
>gi|329764725|ref|ZP_08256320.1| NHL repeat-containing protein [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329138775|gb|EGG43016.1| NHL repeat-containing protein [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 500
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 49/177 (27%), Gaps = 23/177 (12%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+S + I + G+D L G N + + E I G + N I + +
Sbjct: 328 SPESAYDTRIDGTAGNDKLK----GTNGNDLIIGYEGDDKIDGKKGNDCIIGGPGNDKIN 383
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G G+D + GN ++ GND+ G G D I V
Sbjct: 384 GGGGDDKIQGNEGDDKISGGKGNDIISGGDGDDKI--NGGKDNDMISGGLGNDKV--HGN 439
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D ++ E L + + G + +
Sbjct: 440 QGDDTITGDE---------------GNDRLHGGKGNDTIDGGTGINRCNGGQGINTL 481
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 45/153 (29%), Gaps = 3/153 (1%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + I G N + + ++G G+D + G N+ GND +G G D
Sbjct: 331 SAYDTRIDGTAGNDKLKGTNGNDLIIGYEGDDKIDGKKGNDCIIGGPGNDKINGGGGDDK 390
Query: 307 FFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
KI + I+ + K + D + + + +
Sbjct: 391 I--QGNEGDDKISGGKGNDIISGGDGDDKINGGKDNDMISGGLGNDKVHGNQGDDTITGD 448
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ L G D + +G +
Sbjct: 449 EGNDRLHGGKGNDTIDGGTGINRCNGGQGINTL 481
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
P I GGDD + D + GG N I + I G + N I+
Sbjct: 369 GNDCIIGGPGNDKINGGGGDDKIQGNEGDDKISGGKGNDIISGGDGDDKINGGKDNDMIS 428
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ V G+ G+D + G+ N+ GND DG +G++
Sbjct: 429 GGLGNDKVHGNQGDDTITGDEGNDRLHGGKGNDTIDGGTGINR 471
>gi|149186311|ref|ZP_01864624.1| calcium binding hemolysin protein, putative [Erythrobacter sp. SD-21]
gi|148829900|gb|EDL48338.1| calcium binding hemolysin protein, putative [Erythrobacter sp. SD-21]
Length = 2532
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/324 (12%), Positives = 80/324 (24%), Gaps = 3/324 (0%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNM 260
S TI D+G + + + G L + + G +
Sbjct: 2112 SSGTFGGSGATVDISDGSATIGDAGQLQVSSIEGLIGTHLADTLVAGAGTNRLWGDRGDD 2171
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + + G + ND + G + + G+D DG +G DT Y + + +
Sbjct: 2172 ALYAGGGNDLLHGGADNDALSGGTGWDDLEGGEGDDTLDGGNGYDTARYSSAAAGVTVSL 2231
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L +E L + + + + + IG D+
Sbjct: 2232 ALVGAQDTGG--AGIDTLVSMEYLVGSAFGDTLTGSDLANQMYGEDGDDTMAGGIGNDLV 2289
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ D+ + A G
Sbjct: 2290 IGGEGSDTIYGQASWDVLRGDAGDDTLWGGNGGDVLLGGDDADSLNGEAGTDRLYGEAGN 2349
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
L+ A+++ D G D + D+ G + G
Sbjct: 2350 DTLDAGAANDQAYGQAGDDTVNGGDGDDFIMGNKGTDTLDGGADNDTVHGGEGNDILAGG 2409
Query: 501 SDRGAAARHYITHGVKEGRNPDAF 524
S + + G D F
Sbjct: 2410 SGDDILIGSWGVDTMSGGTGADTF 2433
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 64/484 (13%), Positives = 116/484 (23%), Gaps = 40/484 (8%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
D+ G G I + +E+ +G S G ++G + D
Sbjct: 1749 SGSGDTDNIYTGAGDDIVHGGGGDDVIFAQGGNNELLGGIGNDIIRSSYGENLLFGEEGD 1808
Query: 153 YENDSFL-TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
+ + D++ + D V Y G N ++
Sbjct: 1809 DILSTGSGADFVDGGSGNDTINLNRGAHIVLGGAGDDTVVTYDY----IYDGANATLLDG 1864
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY--IDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + G D + + + I + + T+ +
Sbjct: 1865 GEGFDTLDIELDRYGAAVSADFSDLSQEQTVGGILIRNFESIGLVLTNNGDTVTGGAFDD 1924
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+D + G + ++V GND G +G DTF S + I+
Sbjct: 1925 NLDGYYGDDTLAGGAGDDVLVGGYGNDTLSGGTGNDTFDVTGGSDTANGGDGTDTAILRF 1984
Query: 330 ANEHKQD-------------------FLSDVERLRF--ADQCIDSVNVKQRSILEYTASY 368
D L +E L + +
Sbjct: 1985 NLTQGLDIDYTSADGGVFQLNDTDVATLISIEALTIFVTSHDNRILLGDHDDSVYGGQGD 2044
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ G D + +G D + D + G D T
Sbjct: 2045 DYFDGGAGDDYLNGSSGNNQLFGGDGND-----EIVTRGIDIVDGGAGDDLIYFYGVSAT 2099
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G + + + S + + A S G +
Sbjct: 2100 VDGGAGLDTLRLSSGTFGGSGATVDISDGSATIGDAGQLQVSSIEG-----LIGTHLADT 2154
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
L + ++G A Y G AL +DL D
Sbjct: 2155 LVAGAGTNRLWGDRGDDAL--YAGGGNDLLHGGADNDALSGGTGWDDLEGGEGDDTLDGG 2212
Query: 549 AGKD 552
G D
Sbjct: 2213 NGYD 2216
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 63/430 (14%), Positives = 117/430 (27%), Gaps = 40/430 (9%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ D G T+ I +G G + G D
Sbjct: 588 DGGNGIDTLRGGGGDDSINGGADDDTLEGGGGADVINAGIGSDVVDGGEGHDTLDGEAGD 647
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFG--YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
D + Y M G + D+ GA G + I+
Sbjct: 648 DTIDGGAGDDVIYGQAGADSMSGGDGNDLIYSNFSGDVADTLIDGGA-----GEDTALID 702
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ + + GD L+D T I ++ + G + + +
Sbjct: 703 MTSSIAALTFSTLAV-GDQLVDTTTIRSIEKVNFYAGSGDDVLTGGVYEDILYGNDGNDV 761
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD- 329
+ G G+D +IG++ ++V G D+ DG G DT Y +V D
Sbjct: 762 LTGGEGDDELIGSAGDDVLAVGGGADIADGGEGSDTLVLTGNRDDYDFTTSYYTTVVVDL 821
Query: 330 --ANEHKQDFLSDVERLRFADQC--------------------------IDSVNVKQRSI 361
+ + + ++E ++FAD
Sbjct: 822 REGSPDGTNSVRNIEYVQFADGTFLLADVAQTTWFGTEGDDRYNGTYARDIIYGFGGDDR 881
Query: 362 LEYTASYEDLIQVIGQDVFES--MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
L +++ + + G D ++ EG D + Y+ + + +D
Sbjct: 882 LSGSSAADTIYGGDGNDYIDAYNWDGDILLDGGEGTDTLNIALAYMTAGVVIDLSSSNDF 941
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
A + + F S D I A A L G + + ++
Sbjct: 942 MIADTR-VVSIEQLSITGTPFDDTIIGGSENDSIRGGAGADLLSGGGGNDYITAEADDVL 1000
Query: 480 FVTFDSYLYL 489
+ YL
Sbjct: 1001 ADGGEGEDYL 1010
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 55/397 (13%), Positives = 102/397 (25%), Gaps = 16/397 (4%)
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
T + + D DV G G + + LG +G +
Sbjct: 258 AGDTLTGGALNDIITGRDGDDVVDGGAGDDEVYGEAGDDIVYGGLGNDFVSGGDGNDVLE 317
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
G ND + D + T +D +A G GN++
Sbjct: 318 GG---AGNDELHAFTGLDTLRGGEGDDIVWVRLETGGTADALA--------DGGSGNDML 366
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
K E + D T+ G + + L + + + ++ T
Sbjct: 367 KFEAPDYSEAITLDFSNGTKFDYYGTTIRGFERYTL-LGGAAGDYMVAGASDDVLSGRTG 425
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G +GND V G ++ + GND G +G D + A +
Sbjct: 426 NDVLAGFTGNDTVFGEEGDDRIYGGDGNDELLGGAGADEVYGGAGDDTVWTVFTPGEVHD 485
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE----DLIQVIGQDVFESM 383
+ ++R A + VN +L+ T+ G D+
Sbjct: 486 AVLDGGGGIDTLSLDRKAMAGATVIDVNAAGTQVLDGTSIANFERLYFYGGSGDDIVTGG 545
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ + G D +G+ R ++
Sbjct: 546 DYRDVLDGNAGDDTLDGGGGDDELDGGDGIDTLLGGEGDDALDGGNGIDTLRGGGGDDSI 605
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
A + L +G D +
Sbjct: 606 NGGADDDTLEGGGGADVINAGIGSDVVDGGEGHDTLD 642
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/259 (14%), Positives = 66/259 (25%), Gaps = 9/259 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G DL+D + + + G N + + + G G D + G + N
Sbjct: 1053 GGDLVDYLRGNAGNDTLS-GGGDNDWLTGAAGNDVLNGGAGNDRIEGDDGADELHGGAGN 1111
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ G D G G D +Y Y + + +D +R
Sbjct: 1112 DRIEGGLGVDALYGGDGDDYLNIDNINYSYVDGEYVYLTESVFDSMIDGGAGTDRATIRL 1171
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLI--------QVIGQDVFESMKHFYEFGLSEGRDIT 398
A D + Y + ++ +GQD +EG D
Sbjct: 1172 AGADTDVTLSIANPDVAYVTNGSTIVGVEILDYLGALGQDTITGGAFNDRIDGAEGNDRL 1231
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
F + D + A G + A ++L D
Sbjct: 1232 FGGLGDDSLFGDDGDDVLRGGDDADFVRGGAGTDTLYGDAGNDRIYGDAGADNLYGGDGD 1291
Query: 459 APDLVQVGKDHFSNFGCEE 477
G D ++
Sbjct: 1292 DLLDAGAGADSLYGESGDD 1310
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/344 (13%), Positives = 87/344 (25%), Gaps = 30/344 (8%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+ G N + T W I G + TI+ + + G G+D + G + ++ +
Sbjct: 3 DITGTPNNDTLVGTLYWDWIEGRAGDDTISGLAGSDYLRGEDGDDTIDGGAGDDEIYGGG 62
Query: 294 GNDVFDGSSGLDTFF------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
G D+ G G D+ + YY P + + + +
Sbjct: 63 GADILRGGDGDDSIYSSFFTGYYVPDVNDILLDGGAGTDFLSLDVGDYAGSITFSLVDPS 122
Query: 348 DQCIDSV------------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ I + + A + +I G DV + E GR
Sbjct: 123 VEQIVAGIRISGFEQIDYEGGYGVDTITGGALDDRIIGWNGDDVLDGGAGDDELDGRTGR 182
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI--ASHEDLI 453
D G DD ++ + G I S
Sbjct: 183 DTLRG-----GDGDDTIRSIDTEGESDLLVDGGAGTDLAVISKEDATTALIFDLSDPSQA 237
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD-----RGAAAR 508
+ + + + + + DD+ + D
Sbjct: 238 QTIGGTVVVNVERVEIYGGLAGDTLTGGALNDIITGRDGDDVVDGGAGDDEVYGEAGDDI 297
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
Y G D LE A +++L G D
Sbjct: 298 VYGGLGNDFVSGGDGNDVLEGGAGNDELHAFTGLDTLRGGEGDD 341
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 64/476 (13%), Positives = 114/476 (23%), Gaps = 40/476 (8%)
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
+ D G TI + G G +YG
Sbjct: 4 ITGTPNNDTLVGTLYWDWIEGRAGDDTISGLAGSDYLRGEDGDDTIDGGAGDDEIYGGGG 63
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
++ DS+ + F P V+DI+ G G + ++V
Sbjct: 64 --------ADILRGGDGDDSIYSSFFTGYYVPDVNDILL--------DGGAGTDFLSLDV 107
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
++ D + ++ I G + +I G + I + +
Sbjct: 108 GDYAGSITFSLVDPSVEQIVAGIRISGFEQIDYEGGYGVDTITGGALDDRIIGWNGDDVL 167
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVF-------------DGSSGLDTFFYYAPSYLYKI 318
G +G+D + G + + G+D DG +G D +
Sbjct: 168 DGGAGDDELDGRTGRDTLRGGDGDDTIRSIDTEGESDLLVDGGAGTDLAVISKEDATTAL 227
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQ--CIDSVNVKQRSILEYTASYEDLIQVIG 376
+ A + +VER+ I+ + + G
Sbjct: 228 IF--DLSDPSQAQTIGGTVVVNVERVEIYGGLAGDTLTGGALNDIITGRDGDDVVDGGAG 285
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D G D D L G+D A T EG +
Sbjct: 286 DDEVYGEAGDDIVYGGLGNDFV----SGGDGNDVLEGGAGNDELHAFTGLDTLRGGEGDD 341
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ + + D+ + FD Y +
Sbjct: 342 IVWVRLETGGTADALADGGSGNDMLKF-EAPDYSEAITLDFSNGTKFDYYGTTIRGFERY 400
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G G + V GR L ++ + D G D
Sbjct: 401 TLLGGAAGDYMVAGASDDVLSGR--TGNDVLAGFTGNDTVFGEEGDDRIYGGDGND 454
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/320 (13%), Positives = 87/320 (27%), Gaps = 30/320 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + + D G G T +A + +L L
Sbjct: 2174 YAGGGNDLLHGGADNDALSGGTGWDDLEGGEGDDTLDGGNGYDTARYSSAAAGVTVSLAL 2233
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV--- 191
+ G V +Y S ++ + M + + + +
Sbjct: 2234 VGAQDTGGAGIDTLVSMEYLVGSAFGDTLTGSDLANQMYGEDGDDTMAGGIGNDLVIGGE 2293
Query: 192 -------QKIYGAPKGSLGNNIYKIE------------VQQKDSPFIQTIYDSGGDDLLD 232
Q + +G G++ +Y G+D LD
Sbjct: 2294 GSDTIYGQASWDVLRGDAGDDTLWGGNGGDVLLGGDDADSLNGEAGTDRLYGEAGNDTLD 2353
Query: 233 L-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
G + + I G + T+ ++V G GND++ G S ++
Sbjct: 2354 AGAANDQAYGQAGDDTVNGGDGDDFIMGNKGTDTLDGGADNDTVHGGEGNDILAGGSGDD 2413
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ S G D G +G DTF + + + D + + D + +
Sbjct: 2414 ILIGSWGVDTMSGGTGADTFRFDDGHSGKFTTTAD---TILDFSSTESDLIDLSAIDAIS 2470
Query: 348 DQCIDSVNVKQRSILEYTAS 367
D+ + TA
Sbjct: 2471 GGSDDAFAFLGDADFSGTAG 2490
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 18/164 (10%), Positives = 44/164 (26%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+++ G G + + + + + G G DV+ G+ N+
Sbjct: 1502 ISISGVTGPLTFTGGGLNDVARGGDASDALDGREGDDFLFGHGGEDVLHGSGGNDRLEGG 1561
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+ +D G G D + + + + + + L + A
Sbjct: 1562 ADSDQVFGGDGDDRIYADLADSILSGGAGFDTLWLDIRASSETTALDFSDIATTALVSGM 1621
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
++ + ++ G D + G D
Sbjct: 1622 EISGFETLTFYGGNGSNNITGSAGDDYIVGGTDTDDLRGHTGND 1665
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 40/251 (15%), Positives = 70/251 (27%), Gaps = 22/251 (8%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + D QTI + ++ + + GG+ I G + + +
Sbjct: 222 DATTALIFDLSDPSQAQTIGGTVVVNVERVEIYGGLAGDTLTGGALNDIITGRDGDDVVD 281
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ V G +G+D+V G N+ GNDV +G +G D + + ++
Sbjct: 282 GGAGDDEVYGEAGDDIVYGGLGNDFVSGGDGNDVLEGGAGNDELHAFTGLDTLRGGEGDD 341
Query: 324 AIIVYDANEHKQDFLSDVER-----------------LRFADQCIDSVNVKQRSILE--- 363
+ V D L+D L F++ E
Sbjct: 342 IVWVRLETGGTADALADGGSGNDMLKFEAPDYSEAITLDFSNGTKFDYYGTTIRGFERYT 401
Query: 364 --YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
A+ + ++ DV G D F Y N
Sbjct: 402 LLGGAAGDYMVAGASDDVLSGRTGNDVLAGFTGNDTVFGEEGDDRIYGGDGNDELLGGAG 461
Query: 422 AARHYITHGVK 432
A Y G
Sbjct: 462 ADEVYGGAGDD 472
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 61/467 (13%), Positives = 115/467 (24%), Gaps = 80/467 (17%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQT----IYDSGGDDLLDLTL-IGGVKNYIDLNTESW---- 250
S + IY + + + G D L++ L IDL++ +
Sbjct: 885 SSAADTIYGGDGNDYIDAYNWDGDILLDGGEGTDTLNIALAYMTAGVVIDLSSSNDFMIA 944
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------DGS 301
+ + ++I ++++G S ND + G + ++ GND DG
Sbjct: 945 DTRVVSIEQLSITGTPFDDTIIGGSENDSIRGGAGADLLSGGGGNDYITAEADDVLADGG 1004
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR-- 359
G D + + Y ++ + ERL F S+
Sbjct: 1005 EGEDYLYLSGVTEFYLPSDGGEVLV-------GGLTVRGFERLSFQAAAAGSIATGGDLV 1057
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
L A + L D G D D+L G+DR
Sbjct: 1058 DYLRGNAGNDTLSGGGDNDWLTGAAGNDVLNGGAGNDRIEGDDG----ADELHGGAGNDR 1113
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+G + + Y + + D + G R
Sbjct: 1114 IEGGLGVDALYGGDGDDYLNIDNINYSYVDGEYVYLTESVFDSMIDGGAGTD---RATIR 1170
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
D+ + L + + + + G+ + A ++ + A
Sbjct: 1171 LAGADTDVTLSIANPDVAYVTNGSTIVGVEILDYLGALGQ-----DTITGGAFNDRIDGA 1225
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
+ G D ++FG D +
Sbjct: 1226 EGNDRLFGGLGDD----------------------------SLFGDDGDDVLR------- 1250
Query: 600 KEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
G F ++ A + D GD
Sbjct: 1251 ------GGDDADFVRGGAGTDTLYGDAGNDRIYGDAGADNLYGGDGD 1291
>gi|60476777|gb|AAX21415.1| ApxIIA [Actinobacillus porcitonsillarum]
Length = 956
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 9/234 (3%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFM--PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G +D +D S Y + Y V D A+ + +
Sbjct: 624 GSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHETIATHQT 683
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++GN KIE +++D F + ++ + N I ++ G
Sbjct: 684 NVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQF-NDIFKGSQFDDVFHGGNGVD 742
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + + + G +G+DV+ G + NN +GND+ G D + + I
Sbjct: 743 TIDGNNGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 321 FENAIIVYDANEHKQDFL-----SDVERLRFADQCIDSVN-VKQRSILEYTASY 368
+ ++ + +D S +E + + + N + + A+Y
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRIGNWFLEDDLASTVANY 856
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 62/212 (29%), Gaps = 61/212 (28%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT----ESWS------------- 251
I G D + + ID S+S
Sbjct: 617 GNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHE 676
Query: 252 SIGGYEKNMT--------------------------------------IAQHTVIESVV- 272
+I ++ N+ I + + + V
Sbjct: 677 TIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQFNDIFKGSQFDDVFH 736
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G D + GN+ ++ F +G+DV DG +G + F + I ++ I
Sbjct: 737 GGNGVDTIDGNNGDDHLFGGAGDDVIDGGNGNN--FLVGGTGNDIISGGKDNDIYVHKTG 794
Query: 333 HKQDFLSDV---ERLRFADQCIDSVNVKQRSI 361
D ++D ++L F+D + + K+
Sbjct: 795 DGNDSITDSGGQDKLAFSDVNLKDLTFKKVDS 826
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 47/197 (23%), Gaps = 38/197 (19%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG---------- 303
N+ ++ T I +GND V S+ V G+D S G
Sbjct: 596 FDDAGNIIESKDTKI-IANLGAGNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDAT 654
Query: 304 --------------LDTFFYYAPSYLYKIYRFENAIIVYDANEHK--------QDFLSDV 341
D+ + ++ + E D L V
Sbjct: 655 AETEKGSYSVKRYVGDSKALHETIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSV 714
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E + + + + + + G D G +
Sbjct: 715 EEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNNGDDHLFGGAGDDVIDGGNGNNFL--- 771
Query: 402 YLYLGSYDDLRNVFGSD 418
G+ +D+ + +
Sbjct: 772 --VGGTGNDIISGGKDN 786
>gi|304393739|ref|ZP_07375667.1| bifunctional hemolysin/adenylate cyclase [Ahrensia sp. R2A130]
gi|303294746|gb|EFL89118.1| bifunctional hemolysin/adenylate cyclase [Ahrensia sp. R2A130]
Length = 940
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 49/155 (31%), Gaps = 3/155 (1%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ T + G K I+ + V G +GND + G+ N+ + + G D G +G
Sbjct: 32 NVITNGDDVLIGSTKGDRISARDGNDVVYGGAGNDTIKGDGGNDALYGNQGKDRLYGDAG 91
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-VERLRFADQCIDSVNVKQRSIL 362
D ++Y + + + + + + + L L
Sbjct: 92 NDALL--GMEGDDRLYGGSGYDGLDGGSGNDRLYGGNDSDLLIGGTGNDHLYGDSGDDAL 149
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ L G D + + G D+
Sbjct: 150 YGGEGNDRLYGGTGNDWLFAGSGSDQVDGDSGNDV 184
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 53/188 (28%), Gaps = 20/188 (10%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ N + +I G N + + + + G +GND ++G ++ + SG
Sbjct: 50 ISARDGNDVVYGGAGNDTIKGDGGNDALYGNQGKDRLYGDAGNDALLGMEGDDRLYGGSG 109
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
D DG SG D + + + +Y +
Sbjct: 110 YDGLDGGSGNDRLY--GGNDSDLLIGGTGNDHLYGDS-----------------GDDALY 150
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFY-EFGLSEGRDITFDSYLYLGSYDDLRN 413
+ L + L G D + ++ D ++ YLG
Sbjct: 151 GGEGNDRLYGGTGNDWLFAGSGSDQVDGDSGNDVVVHVASENDADGNTNSYLGGSGTDVL 210
Query: 414 VFGSDRGA 421
D A
Sbjct: 211 YVSIDGEA 218
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 56/176 (31%), Gaps = 10/176 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
TI GG+D L L G N L E + G +
Sbjct: 55 GNDVVYGGAGNDTIKGDGGNDALYGNQGKDRLYGDAGNDALLGMEGDDRLYGGSGYDGLD 114
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + + G + +D++IG + N+ + SG+D G G D + + + F
Sbjct: 115 GGSGNDRLYGGNDSDLLIGGTGNDHLYGDSGDDALYGGEGNDRLYGGTGND----WLFAG 170
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQD 378
+ + D + V AD +S +L + E + D
Sbjct: 171 SGSDQVDGDSGNDVVVHVASENDADGNTNSYLGGSGTDVLYVSIDGEAWEADLAGD 226
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 52/183 (28%), Gaps = 19/183 (10%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
++G+DV+IG++ + GNDV G +G DT +Y + +Y +
Sbjct: 35 TNGDDVLIGSTKGDRISARDGNDVVYGGAGNDTI--KGDGGNDALYGNQGKDRLY--GDA 90
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D L +E L + Y+ L G D
Sbjct: 91 GNDALLGME---------------GDDRLYGGSGYDGLDGGSGNDRLYGGNDSDLLIGGT 135
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
G D + Y N + G + + ++AS D
Sbjct: 136 GNDHLYGDSGDDALYGGEGNDRLYGGTGNDWLFAGSGSDQVDGDSGNDVVVHVASENDAD 195
Query: 454 NAF 456
Sbjct: 196 GNT 198
Score = 44.0 bits (102), Expect = 0.075, Method: Composition-based stats.
Identities = 18/151 (11%), Positives = 32/151 (21%)
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
V + + +R+ D ++ + L G+D
Sbjct: 33 VITNGDDVLIGSTKGDRISARDGNDVVYGGAGNDTIKGDGGNDALYGNQGKDRLYGDAGN 92
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
EG D + Y G N + G AL
Sbjct: 93 DALLGMEGDDRLYGGSGYDGLDGGSGNDRLYGGNDSDLLIGGTGNDHLYGDSGDDALYGG 152
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
++ L + G D +
Sbjct: 153 EGNDRLYGGTGNDWLFAGSGSDQVDGDSGND 183
Score = 41.7 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 55/162 (33%), Gaps = 7/162 (4%)
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
V ND+ + + + D +G + + ++YG G G +
Sbjct: 59 VYGGAGNDTIKGDGGNDALYGNQGKDRLYGDAGNDALLGMEGDDRLYGG-SGYDGLDGGS 117
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G+D L G + E + G N + +
Sbjct: 118 GNDRLYGGNDSDLLIGGTGNDHL----YGDSGDDALYGGEGNDRLYGGTGNDWLFAGSGS 173
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ V G SGNDVV+ ++ N ++ + + G SG D +
Sbjct: 174 DQVDGDSGNDVVVHVASENDADGNT--NSYLGGSGTDVLYVS 213
>gi|299134413|ref|ZP_07027606.1| Hemolysin-type calcium-binding region [Afipia sp. 1NLS2]
gi|298591160|gb|EFI51362.1| Hemolysin-type calcium-binding region [Afipia sp. 1NLS2]
Length = 753
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/394 (12%), Positives = 95/394 (24%), Gaps = 42/394 (10%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ + S M DV G G TI + + +
Sbjct: 335 LAENGSPVADVIDAGSGNDMVAGGLGNDVIHGGAGNDTITGGPST----ISPLSETMITV 390
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G V + + + D++ T + AV +
Sbjct: 391 TGYGTVVNGIGAQMQLLINGQQVGGTVEFHNAADSTEYQSHTFTFHNPSAVTSLDVGFIN 450
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD------LTLIGGVKNYIDLNTESWSSIG 254
+++ + ++ D ++ +L G + D++ G
Sbjct: 451 DGYDDVTGADRNLFIKDVTVNGHELSIPDAINPSSPGTGSLYGNRAIHFDMDDHQNLFSG 510
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES-------------SGNDVF--- 298
N TI + + G +G DV+ G + ++ GND+
Sbjct: 511 DQTDNDTIDGGPGNDVITGGAGADVIHGGTGDDQIIGGPGTATAYSQLYGDDGNDIIKTV 570
Query: 299 --------DGSSGLDTFFYYAPS-----YLYKIYRFENAIIVYDANEHKQDFLSDV---E 342
DG G D + + Y D L +
Sbjct: 571 SIDNGALLDGGRGKDQLYGGWTANVMNGGPDADYLSGGGGNDIMHGNDGDDTLKGGPAAD 630
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
R+ D L + L G D F G S
Sbjct: 631 RMYGDDGSDTLQGGTGNEFLYGGNDNDKLTGGAGNDYLSGGSGNDTFIFGPGFGKDVISD 690
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+ + + F + +H ++EG +
Sbjct: 691 FHNTNGERDIIQFDHTVFSDFNSLQSHMIQEGTD 724
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 70/261 (26%), Gaps = 32/261 (12%)
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
TI I G G + G S L
Sbjct: 506 NLFSGDQTDNDTIDGGPGNDVITGGAGADVIHGGTGDDQIIGGPGTATAYSQLY------ 559
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
+ + + ++ ++YG ++ P + G
Sbjct: 560 GDDGNDIIKTVSIDNGALLDGGRGKDQLYGGWTANV----------MNGGPDADYLSGGG 609
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D I + ++ G + +++ G +GN+ + G + N
Sbjct: 610 GND-------------IMHGNDGDDTLKGGPAADRMYGDDGSDTLQGGTGNEFLYGGNDN 656
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR- 345
+ +GND G SG DTF + I F N D + SD L+
Sbjct: 657 DKLTGGAGNDYLSGGSGNDTFIFGPGFGKDVISDFHNTNGERDIIQFDHTVFSDFNSLQS 716
Query: 346 --FADQCIDSVNVKQRSILEY 364
+ + + ++
Sbjct: 717 HMIQEGTDVIITADANNTIDL 737
Score = 41.3 bits (95), Expect = 0.50, Method: Composition-based stats.
Identities = 50/410 (12%), Positives = 91/410 (22%), Gaps = 58/410 (14%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDL--TLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ I+ G+D + + I + + T + + G M +
Sbjct: 347 DAGSGNDMVAGGLGNDVIHGGAGNDTITGGPSTISPLSETMITVTGYGTVVNGIGAQMQL 406
Query: 263 -------AQHTVIESVVGS----SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ S S SA ND +D +G D +
Sbjct: 407 LINGQQVGGTVEFHNAADSTEYQSHTFTFHNPSAVTSLDVGFINDGYDDVTGADRNLFIK 466
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYED 370
+ I + + + D Q + S + ++ +
Sbjct: 467 DVTVNGHELSIPDAINPSSPGTGSLYGNRAIHFDMDDHQNLFSGDQTDNDTIDGGPGNDV 526
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ G DV + G + LY +D+ D GA
Sbjct: 527 ITGGAGADVIHGGTGDDQIIGGPGTATAYS-QLYGDDGNDIIKTVSIDNGALLDG----- 580
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+D + A + + + G D L
Sbjct: 581 ----------------GRGKDQLYGGWTANVMNGGPDADYLSGGGGNDIMHGNDGDDTLK 624
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
++G D L+ +E L + AG
Sbjct: 625 GGPAADRMYGDDGS--------------------DTLQGGTGNEFLYGGNDNDKLTGGAG 664
Query: 551 KDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMK 600
D+ G + F P D N G H +
Sbjct: 665 NDY--LSGGSGNDTFIFGPGFGKDVISDFHNTNGERDIIQFDHTVFSDFN 712
Score = 40.9 bits (94), Expect = 0.76, Method: Composition-based stats.
Identities = 40/398 (10%), Positives = 87/398 (21%), Gaps = 78/398 (19%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
K + + T + G L G + + G N I
Sbjct: 310 GYSPMGKPAQSLITDWFGGHIQPPPLAENGSPVADVIDAGSGNDMVAGGLGNDVIHGGAG 369
Query: 268 IESVVGSSG-----NDVVIGNSANNVFFESSGND---VFDGSSGLDTFFYYAPSYLYKIY 319
+++ G ++ +I + G + +G T ++ + +
Sbjct: 370 NDTITGGPSTISPLSETMITVTGYGTVVNGIGAQMQLLINGQQVGGTVEFHNAADSTEYQ 429
Query: 320 RF--------ENAIIVYDANEHKQDFLSDVER-LRFADQCID------------------ 352
+ D ++ +R L D ++
Sbjct: 430 SHTFTFHNPSAVTSLDVGFINDGYDDVTGADRNLFIKDVTVNGHELSIPDAINPSSPGTG 489
Query: 353 -------------------SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
S + ++ + + G DV +
Sbjct: 490 SLYGNRAIHFDMDDHQNLFSGDQTDNDTIDGGPGNDVITGGAGADVIHGGTGDDQIIGGP 549
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
G + LY +D+ D GA +D +
Sbjct: 550 GTATAYS-QLYGDDGNDIIKTVSIDNGALLDG---------------------GRGKDQL 587
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
A + + + G D L ++G D +
Sbjct: 588 YGGWTANVMNGGPDADYLSGGGGNDIMHGNDGDDTLKGGPAADRMYGDDGSDTLQ--GGT 645
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
G + + L A ++ L + + G
Sbjct: 646 GNEFLYGGNDNDKLTGGAGNDYLSGGSGNDTFIFGPGF 683
>gi|294085322|ref|YP_003552082.1| hypothetical protein SAR116_1755 [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664897|gb|ADE39998.1| hypothetical protein SAR116_1755 [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 2052
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 67/199 (33%), Gaps = 23/199 (11%)
Query: 9 TTERIADHLLRDQ-YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
T + +LL + +W+ + + + + A+ AL E+ +
Sbjct: 1847 TQTQYLKYLLDGEAWWTPPDGSTLHMSWSLNTKRLNSQQTIDAARAKVERALAEYETFLT 1906
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F E + ++ + + + + GI T +HE
Sbjct: 1907 IDFIEVAHNAHS-LGALEFSINKNSGSSGGFASLVRWGGGVSTGLGIHISTY-----IHE 1960
Query: 128 IGHALGLMHPGSYNGGYPVYGVD------NDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
IGH LGL HP Y G + ++ S+M+Y + S
Sbjct: 1961 IGHVLGLAHPFGYTDSSTHTGPPKQGHFGKTPDEENTSNSIMTYGPVEKS---------- 2010
Query: 182 TPMVSDIVAVQKIYGAPKG 200
T +DI A+Q +YG P
Sbjct: 2011 TITQNDINALQFLYGIPGT 2029
>gi|221327941|gb|ACM17706.1| RTX toxin RtxA [Vibrio vulnificus]
Length = 4595
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 58/220 (26%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+L+ +++ G + A + G G+DV +N+
Sbjct: 4218 DFLRNSGHLQGDGDINLSLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI 4277
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4278 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4336
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ S G D+
Sbjct: 4337 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGDDFANVFGNYNRINASAGNDVVK 4396
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N + A G
Sbjct: 4397 -----LMGYHAVLNGGEGEDHLIAAAISKFSQFNGGEGRD 4431
>gi|223041413|ref|ZP_03611616.1| ApxIIA [Actinobacillus minor 202]
gi|190692227|gb|ACE87883.1| ApxIIA [Actinobacillus minor 202]
Length = 956
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 9/234 (3%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFM--PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G +D +D S Y + Y V D A+ + +
Sbjct: 624 GSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHETIATHQT 683
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++GN KIE +++D F + ++ + N I ++ G
Sbjct: 684 NVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQF-NDIFKGSQFDDVFHGGNGVD 742
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + + + G +G+DV+ G + NN +GND+ G D + + I
Sbjct: 743 TIDGNNGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 321 FENAIIVYDANEHKQDFL-----SDVERLRFADQCIDSVN-VKQRSILEYTASY 368
+ ++ + +D S +E + + + N + + A+Y
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRIGNWFLEDDLASTVANY 856
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 62/212 (29%), Gaps = 61/212 (28%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT----ESWS------------- 251
I G D + + ID S+S
Sbjct: 617 GNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHE 676
Query: 252 SIGGYEKNMT--------------------------------------IAQHTVIESVV- 272
+I ++ N+ I + + + V
Sbjct: 677 TIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQFNDIFKGSQFDDVFH 736
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G D + GN+ ++ F +G+DV DG +G + F + I ++ I
Sbjct: 737 GGNGVDTIDGNNGDDHLFGGAGDDVIDGGNGNN--FLVGGTGNDIISGGKDNDIYVHKTG 794
Query: 333 HKQDFLSDV---ERLRFADQCIDSVNVKQRSI 361
D ++D ++L F+D + + K+
Sbjct: 795 DGNDSITDSGGQDKLAFSDVNLKDLTFKKVDS 826
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 47/197 (23%), Gaps = 38/197 (19%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG---------- 303
N+ ++ T I +GND V S+ V G+D S G
Sbjct: 596 FDDAGNIIESKDTKI-IANLGAGNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDAT 654
Query: 304 --------------LDTFFYYAPSYLYKIYRFENAIIVYDANEHK--------QDFLSDV 341
D+ + ++ + E D L V
Sbjct: 655 AETEKGSYSVKRYVGDSKALHETIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSV 714
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E + + + + + + G D G +
Sbjct: 715 EEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNNGDDHLFGGAGDDVIDGGNGNNFL--- 771
Query: 402 YLYLGSYDDLRNVFGSD 418
G+ +D+ + +
Sbjct: 772 --VGGTGNDIISGGKDN 786
>gi|153971525|ref|YP_001393065.1| RTX toxin RtxA [Vibrio vulnificus]
gi|153971721|ref|YP_001393222.1| RTX toxin RtxA [Vibrio vulnificus]
gi|152955047|emb|CAL25399.1| RTX toxin RtxA [Vibrio vulnificus]
gi|152955206|emb|CAL25556.1| RTX toxin RtxA [Vibrio vulnificus]
gi|221327945|gb|ACM17708.1| RTX toxin RtxA [Vibrio vulnificus]
Length = 4595
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 58/220 (26%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+L+ +++ G + A + G G+DV +N+
Sbjct: 4218 DFLRNSGHLQGDGDINLSLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI 4277
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4278 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4336
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ S G D+
Sbjct: 4337 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGDDFANVFGNYNRINASAGNDVVK 4396
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N + A G
Sbjct: 4397 -----LMGYHAVLNGGEGEDHLIAAAISKFSQFNGGEGRD 4431
>gi|149201942|ref|ZP_01878916.1| Nidogen, extracellular region [Roseovarius sp. TM1035]
gi|149144990|gb|EDM33019.1| Nidogen, extracellular region [Roseovarius sp. TM1035]
Length = 936
Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/217 (15%), Positives = 60/217 (27%), Gaps = 8/217 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
Q T+ GDD + N + + +IGG + T+
Sbjct: 664 GGNDQLSGGEGNDTLDGGAGDDRI----SSSDGNDLAIGGAGNDNIGGGLGDDTLDGGDG 719
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G G D V G + N+V +G+D G G D+ I E A +
Sbjct: 720 DDILGGGFGADSVTGGAGNDVVAGGAGDDTLSGGDGNDSM--SGSFGNDLIDGGEGADDI 777
Query: 328 YDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D + + + + + L + + G D +
Sbjct: 778 GGGTGQDTIDAGAGNDSVGGGEGDDSILGGDGNDFLAGGGRNDTIDGGAGNDTINAGAGN 837
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
G D F + D+ F +
Sbjct: 838 DVITGGTGAD-QFVFSAFFDGEADVITDFEDGLDSFF 873
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/228 (15%), Positives = 62/228 (27%), Gaps = 24/228 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-----SSIGGYEKNMTIA 263
+ + S G+D + L + D + S+ G N +A
Sbjct: 683 GDDRISSSDGNDLAIGGAGNDNIGGGLGDDTLDGGDGDDILGGGFGADSVTGGAGNDVVA 742
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++ G GND + G+ N++ G D G +G DT A + + E
Sbjct: 743 GGAGDDTLSGGDGNDSMSGSFGNDLIDGGEGADDIGGGTGQDTI--DAGAGNDSVGGGEG 800
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ D + ++ A + + G DV
Sbjct: 801 DDSILGG-----------------DGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVITGG 843
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+F S D D D + D + G
Sbjct: 844 TGADQFVFSAFFDGEADVITDFEDGLDSFFIRRFDPDTGVENINNGGN 891
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 63/246 (25%), Gaps = 47/246 (19%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D + L L G N L ++ G + + + + G GND + G + ++
Sbjct: 627 DPVSLNLEGTEGNDTLLGATLDDTLSGLGGDDRLEGRGGNDQLSGGEGNDTLDGGAGDDR 686
Query: 289 FFESSGNDVFDGSSGLDTFF-------------------------YYAPSYLYKIYRFEN 323
S GND+ G +G D + +
Sbjct: 687 ISSSDGNDLAIGGAGNDNIGGGLGDDTLDGGDGDDILGGGFGADSVTGGAGNDVVAGGAG 746
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ D +++ +D+ GQD ++
Sbjct: 747 DDTLSGG-----------------DGNDSMSGSFGNDLIDGGEGADDIGGGTGQDTIDAG 789
Query: 384 KHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
G EG D D G D + G+D A G +
Sbjct: 790 AGNDSVGGGEGDDSILGGDGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVITGGTGADQF 849
Query: 439 AFKALE 444
F A
Sbjct: 850 VFSAFF 855
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 77/245 (31%), Gaps = 6/245 (2%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ I + +VG++ ND + N+ ++ +GND+ DG +G DT + + Y
Sbjct: 3 GLVIPGTPEADDLVGTADNDTITANAGDDTLTGGAGNDLLDGGAGFDTAVFAGNAADYST 62
Query: 319 YRFENA-IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS---ILEYTASYEDLIQV 374
E+A + D L +++RL+F + D + + ++ +
Sbjct: 63 GVNESAQRTITHTATGDTDILVNIQRLQFDNISTDVLLNPDNTSPGLIRGLGGDAGFGED 122
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
+ + + F +Y G + + N + +
Sbjct: 123 FLARNDDGSTVQIDITPIFENGLNFFGTVYQGLW--INNNGSVTFTGPRGTFTPDVITGV 180
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
N A + H+ + VT+D Y S D
Sbjct: 181 SNNPNITPFFADVDTRGGEVAPTPGGNSQGSNLVHWDFNTLGDQLIVTWDDVGYFSSRTD 240
Query: 495 LRNVF 499
L N F
Sbjct: 241 LLNAF 245
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 63/248 (25%), Gaps = 54/248 (21%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G E N T+ T+ +++ G G+D + G N+ GND DG +G D
Sbjct: 632 NLEGTEGNDTLLGATLDDTLSGLGGDDRLEGRGGNDQLSGGEGNDTLDGGAGDDRI---- 687
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR------------ 359
++ D +
Sbjct: 688 ------------------SSSDGNDLAIG------GAGNDNIGGGLGDDTLDGGDGDDIL 723
Query: 360 ------SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ A + + G D S G D+ DD+
Sbjct: 724 GGGFGADSVTGGAGNDVVAGGAGDDTLSGGDGNDSMSGSFGNDLI----DGGEGADDIGG 779
Query: 414 VFGSDRGAAARHYITHGVKEGRN----PDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
G D A + G EG + D L ++ + + G D
Sbjct: 780 GTGQDTIDAGAGNDSVGGGEGDDSILGGDGNDFLAGGGRNDTIDGGAGNDTINAGAGNDV 839
Query: 470 FSNFGCEE 477
+ +
Sbjct: 840 ITGGTGAD 847
Score = 39.8 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 25/246 (10%), Positives = 51/246 (20%), Gaps = 22/246 (8%)
Query: 318 IYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ E + A L +RL + L+ A + + G
Sbjct: 633 LEGTEGNDTLLGATLDDTLSGLGGDDRLEGRGGNDQLSGGEGNDTLDGGAGDDRISSSDG 692
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D+ G + A G
Sbjct: 693 NDLAIGGAGNDNIGGG---------LGDDTLDGGDGDDILGGGFGADSVTGGAGNDVVAG 743
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
L ++ + +F + G D ++ + G D
Sbjct: 744 GAGDDTLSGGDGNDSMSGSFGNDLIDGGEGADDIGGGTGQDTIDAGAGNDSVGGGEGDDS 803
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
+ G A ++ A ++ + + G D F
Sbjct: 804 ILGGDGNDFLA------------GGGRNDTIDGGAGNDTINAGAGNDVITGGTGADQFVF 851
Query: 557 FGYEEG 562
+ +G
Sbjct: 852 SAFFDG 857
>gi|85705414|ref|ZP_01036512.1| hypothetical protein ROS217_01290 [Roseovarius sp. 217]
gi|85669839|gb|EAQ24702.1| hypothetical protein ROS217_01290 [Roseovarius sp. 217]
Length = 818
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/220 (13%), Positives = 52/220 (23%), Gaps = 29/220 (13%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN------------------ 277
G I +E+ ++ G N T+ + + G GN
Sbjct: 543 SGDAARRIVTGSEAHDNLHGGLGNDTLRGLDGDDQLDGGEGNDSIGGGLGNDTIDGGDGD 602
Query: 278 ---------DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
D + G+ N+V +GND +G G D+ +
Sbjct: 603 DIIGGGFGADSITGSIGNDVVAGGAGNDTLEGGDGNDSMSGSFG-NELINAGGGTDDVGG 661
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D + +R+ + L + + G D
Sbjct: 662 GTGRDTIDAGAGNDRVGGGEGDDLISGGAGSDFLAGGGRNDTIDGGTGNDTLNGGAGNDV 721
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
G D F + D+ F +
Sbjct: 722 MTGGAGAD-QFVFSAFFDGEADVIADFEDGIDRFFIRIVN 760
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 10/126 (7%)
Query: 199 KGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK------NYIDLNTES 249
GS+GN++ + ++ S G++L++ + ID
Sbjct: 615 TGSIGNDVVAGGAGNDTLEGGDGNDSMSGSFGNELINAGGGTDDVGGGTGRDTIDAGAG- 673
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+GG E + I+ + + G ND + G + N+ +GNDV G +G D F +
Sbjct: 674 NDRVGGGEGDDLISGGAGSDFLAGGGRNDTIDGGTGNDTLNGGAGNDVMTGGAGADQFVF 733
Query: 310 YAPSYL 315
A
Sbjct: 734 SAFFDG 739
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 8/137 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T+ G+D ++ G N + +GG TI
Sbjct: 619 GNDVVAGGAGNDTLEGGDGND----SMSGSFGNELINAGGGTDDVGGGTGRDTIDAGAGN 674
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ V G G+D++ G + ++ ND DG +G DT + + A
Sbjct: 675 DRVGGGEGDDLISGGAGSDFLAGGGRNDTIDGGTGNDTL--NGGAGNDVMTGGAGADQFV 732
Query: 329 DAN--EHKQDFLSDVER 343
+ + + D ++D E
Sbjct: 733 FSAFFDGEADVIADFED 749
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 59/184 (32%), Gaps = 15/184 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + G+D + + T+ GG + I SI G N +A
Sbjct: 565 GNDTLRGLDGDDQLDGGEGNDSIGGGLGNDTIDGGDGDDIIGGGFGADSITGSIGNDVVA 624
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+++ G GND + G+ N + G D G +G DT A + ++ E
Sbjct: 625 GGAGNDTLEGGDGNDSMSGSFGNELINAGGGTDDVGGGTGRDTI--DAGAGNDRVGGGEG 682
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
++ + DFL+ + L A + + G D F
Sbjct: 683 DDLI--SGGAGSDFLAG------GGRNDTIDGGTGNDTLNGGAGNDVMTGGAGADQFVFS 734
Query: 384 KHFY 387
F
Sbjct: 735 AFFD 738
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 23/192 (11%), Positives = 47/192 (24%), Gaps = 3/192 (1%)
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
I+ + ++++L +G D + + EG D +
Sbjct: 550 IVTGSEAHDNLHGGLGNDTLRGLDGDDQLDGGEGNDSIGGGLGNDTIDGGDGDDIIGGGF 609
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
A + G LE ++ + +F + G D +
Sbjct: 610 GADSITGSIGNDVVAGGAGNDTLEGGDGNDSMSGSFGNELINAGGGTDDVGGGTGRDTID 669
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
+ G D G+ A + G L A ++ +
Sbjct: 670 AGAGNDRVGGGEGDDLISGGAGSDFLAGGGRNDTIDGG---TGNDTLNGGAGNDVMTGGA 726
Query: 541 ADAPDLVQAGKD 552
+ A D
Sbjct: 727 GADQFVFSAFFD 738
>gi|126734969|ref|ZP_01750715.1| Hemolysin-type calcium-binding region [Roseobacter sp. CCS2]
gi|126715524|gb|EBA12389.1| Hemolysin-type calcium-binding region [Roseobacter sp. CCS2]
Length = 890
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 4/126 (3%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D + + N I I G + I + + + G +GND + G ++
Sbjct: 440 DTVPVEDTADGSNDIIDGGAGNDIIYGDRGDDDIEGGSGNDDIDGGTGNDEIEGGIGDDS 499
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+G+DV DG +G+DT + +I + D + +
Sbjct: 500 IDGGAGDDVLDGGAGVDTVEGGSGDDEIRISA----GTDTISGGAGTDTFTAEDGTSLTG 555
Query: 349 QCIDSV 354
+ I+
Sbjct: 556 ETIEVA 561
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/342 (11%), Positives = 71/342 (20%), Gaps = 38/342 (11%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
I TI + V SGND V G N+ ++G+D +G G D
Sbjct: 166 GDDLIIAGAGEDTINAGGGADEVDAGSGNDTVEGGDGNDQIVGNAGSDTLNGGDGDDIIR 225
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE--------RLRFAD------------ 348
+ + A + D V + F D
Sbjct: 226 GDSVPQSSDFASLPDPSGDGSAIDDGDDLSGGVSYTSGGVQVDITFEDDGQSTGFDYNNS 285
Query: 349 -----QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF-------------YEFG 390
++ + + S D S F +
Sbjct: 286 DAQNSSGLNDGQDVSDNAILLGGSGGGNTSTTTIDFSSSDAGFEGEVTNVNFKLNDIDEA 345
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
RD + + G G
Sbjct: 346 TGSWRDTVTITAFDADGNPVEVTLTGGANHTLTDTDGVAGNDTATANLGTGNQLPSTDAA 405
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
L+ A + + + + G + + D N Y
Sbjct: 406 SLLVEVAGPVSSIVINYGNLGSGGQRIDLTEIHYDTVPVEDTADGSNDIIDGGAGNDIIY 465
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G + ++ ++++ D AG D
Sbjct: 466 GDRGDDDIEGGSGNDDIDGGTGNDEIEGGIGDDSIDGGAGDD 507
>gi|197104477|ref|YP_002129854.1| hypothetical protein PHZ_c1011 [Phenylobacterium zucineum HLK1]
gi|196477897|gb|ACG77425.1| hypothetical protein PHZ_c1011 [Phenylobacterium zucineum HLK1]
Length = 802
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 53/167 (31%), Gaps = 9/167 (5%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + + + G+D + D ++GG N + + G + T+
Sbjct: 633 GGDDRIYGGSGFDDAHGNLGNDTVSGGEGDDWVVGGQGNDLLNGEGGHDVVYGNLGDDTL 692
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ V G G+D++ ++ G+D G +G D F + + L ++ F
Sbjct: 693 HGGLGSDWVRGGQGDDLIYAGGGDDWISGDMGSDTITGGAGADLFHTHGNAGLDRVLDFS 752
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + E L+ + + L +
Sbjct: 753 ----FAQGDRVNVLAGTGYEALQVGADTVIRMTGGGEMSLAGVRLAD 795
>gi|153791308|ref|NP_001093408.1| macrophage metalloelastase [Sus scrofa]
gi|149693281|emb|CAO00953.1| Mmp12 protein [Sus scrofa]
Length = 466
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 58/193 (30%), Gaps = 50/193 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-------- 74
W +F+ Y+ + T D+ + A WS V L F +
Sbjct: 109 WKKHFLTYRINNYTPDMRPKDVDY-------AIQKAFQAWSNVTPLKFRKIDAGEADIMI 161
Query: 75 -----IHSDIK-FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F + +FD+A++W KGT L ALHE+
Sbjct: 162 KFALGEHGDFNSFDGQGGVLAHAFAPGPGIGGDAHFDEAEIWTKN-NKGTNLFLVALHEL 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H Y N + DI
Sbjct: 221 GHSLGLGHSNDPTAIMFPYINYNSFHL----------------------------SADDI 252
Query: 189 VAVQKIYGAPKGS 201
+Q +YG P+
Sbjct: 253 RGIQSLYGPPEKH 265
>gi|91089485|ref|XP_969495.1| PREDICTED: similar to matrix metalloproteinase [Tribolium
castaneum]
Length = 632
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 65/206 (31%), Gaps = 48/206 (23%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETSIH 76
L Q W + + D+ ++P + V AL W++ LTF E
Sbjct: 113 LHGQKWPYTNLTWSLRSR-------DLMGMDPYQVRLVISKALDVWARHSKLTFTEVDSP 165
Query: 77 -SDI-----------KFISSNNG----YVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
+DI F G + P + + D+A +GT L
Sbjct: 166 KADILIFFVRGEHGDNFPFDGKGVILAHAFFPNGGHSIDVHFDADEAWTTVPNSDEGTNL 225
Query: 121 SHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
+ A HE GH+LGL H S + Y ++ +
Sbjct: 226 FNVAAHEFGHSLGLSH--------------------SSEEGALMYPWYKEMENGFDYELP 265
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNI 206
D + +Q +YGA L + I
Sbjct: 266 D----DDKLGIQALYGARTTRLWDRI 287
>gi|3253294|gb|AAC24352.1| hemolysin [Escherichia coli]
Length = 998
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 51/186 (27%), Gaps = 28/186 (15%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G + N I + + + G G+D + G ++ F SGND G G + +
Sbjct: 721 NDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNN--YL 778
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S ++ I+ +L+ +
Sbjct: 779 TGGSGNDELQAHGAYNILSGGT-----------------GDDKLYGGGGIDLLDGGEGND 821
Query: 370 DLIQVIGQDV----FESMKHFYEFGLSEGR-----DITFDSYLYLGSYDDLRNVFGSDRG 420
L G D+ H +G DI+FD + +DL +
Sbjct: 822 YLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLSDISFDDIAFKKVGNDLIMNKAINGA 881
Query: 421 AAARHY 426
+
Sbjct: 882 LSFNES 887
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 29/181 (16%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYR 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKKVGNDLIMNKAINGALSFNESND 889
Query: 370 D 370
Sbjct: 890 V 890
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 56/197 (28%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKKVGNDLI 873
>gi|260460268|ref|ZP_05808520.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075]
gi|259033913|gb|EEW35172.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075]
Length = 2931
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 49/337 (14%), Positives = 90/337 (26%), Gaps = 34/337 (10%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ +I G + I I+++ G +G+D++ G + ++ ++GND + D
Sbjct: 2058 TGTTNDTITGSAGDDHIQGGAGIDTLNGGAGDDLLDGGTGADIMKGNAGNDTYVVDDAGD 2117
Query: 306 TFFYYAPSYLYKI---------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
A + + Y + + L
Sbjct: 2118 QVIEAASEGIDMVLSSVTYTIFYADVENLTLTGTAAIDGTGNVSSNVLTGNSGDNRLTGN 2177
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLR 412
A + ++ G D +EG D D Y+G + +
Sbjct: 2178 GGNDTFFGGAGNDFMLGNTGNDTMRGGGGNDHLEGAEGNDNYVFQRGDGNDYVGDFRATK 2237
Query: 413 NVFGSDRGAA-----ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
V SD AA + I + G I + +
Sbjct: 2238 KVGSSDTAAAQALGVSATGIVNTWVGGYMWSTTANQLLILGDAGSDTLTLSGGIVAEDLS 2297
Query: 468 DHFSN----------FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
++ G G VT + G+ D G +A ++I G
Sbjct: 2298 FAWTGRDGDDLTITIAGGSSGDSVTLGQEAFAGARIDKLA----LDGMSATNFIVVGAVG 2353
Query: 518 G--RNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G + +A +E L AG D
Sbjct: 2354 GTANAGTGSNIIFGLAGNETLWGNTGTDIIYAGAGND 2390
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 77/580 (13%), Positives = 143/580 (24%), Gaps = 60/580 (10%)
Query: 13 IADHLLRDQYWSNYF-IRYKPDVLTTHRLSFDITELNPNAQEVARWALGE---WSKVVDL 68
D LL ++ D + E ++ ++ ++ V +L
Sbjct: 2087 AGDDLLDGGTGADIMKGNAGNDTYVVDDAGDQVIEAASEGIDMVLSSVTYTIFYADVENL 2146
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
T + N +S D + G G +L + +
Sbjct: 2147 TLT-----GTAAIDGTGNVSSNVLTGNSGDNRLTGNGGNDTFFGGAGNDFMLGNTGNDTM 2201
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
G H G D + D+ + G AT + +
Sbjct: 2202 RGGGGNDHLEGAEGNDNYVFQRGDGNDYVGDFRATKKVGSSDTAAAQALGVSAT-GIVNT 2260
Query: 189 VAVQKIYGAPKG------SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
++ G++ + GDDL G +
Sbjct: 2261 WVGGYMWSTTANQLLILGDAGSDTLTLSGGIVAEDLSFAWTGRDGDDLTITIAGGSSGDS 2320
Query: 243 IDLNTESW----------------SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
+ L E++ + I T T + G +GN+ + GN+
Sbjct: 2321 VTLGQEAFAGARIDKLALDGMSATNFIVVGAVGGTANAGTGSNIIFGLAGNETLWGNTGT 2380
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
++ + +GNDV +G DT + + D + D +
Sbjct: 2381 DIIYAGAGNDVLSAGTGDDTLV--GGTGNDYENGEGGSDRYVYRRGDGADTVEDFSMIV- 2437
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ +V L +AS + G S + G D L G
Sbjct: 2438 ---TTAAADVSAAQALGVSASGYTNTWIGGYLWQTSTNSLLKLIDGTGSDTL---SLEGG 2491
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
D + G G G + + +A E L +L
Sbjct: 2492 IKADDLSFSWIGVGGDNLQLAIAGGPAGDSIRLDQQKTGVAKIEKLQLDGLGPVNLFVAP 2551
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
G + L + L Y GV
Sbjct: 2552 SS-----GGTISAGSGSNIIFGLSGNESL--------------YGNSGVDVIYGGAGNDW 2592
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ A ++ L + + Q G D + ++ S+
Sbjct: 2593 MAGGAGNDTLFGQAGNDYLVGQDGDDRYVYRRGDQADSVD 2632
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 38/93 (40%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ I G N ++ ++ ++ + G +GND + G + N+ F +GND G G D
Sbjct: 2559 AGSGSNIIFGLSGNESLYGNSGVDVIYGGAGNDWMAGGAGNDTLFGQAGNDYLVGQDGDD 2618
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ Y + A+ A+ + L
Sbjct: 2619 RYVYRRGDQADSVDDATYAVTTATADINAAAAL 2651
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 80/268 (29%), Gaps = 14/268 (5%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
S S I +G +S + D G G T+ + +
Sbjct: 2557 ISAGSGSNIIFGLSGNESL-YGNSGVDVIYGGAGNDWMAGGAGNDTLFGQAGNDYL---V 2612
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G Y D + T+ + A D A
Sbjct: 2613 GQDGDDRYVYRRGDQADSVDDATYAVTTATADINAAAALGVYAGGVVNTWVGGYDWDA-T 2671
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL------- 245
+ +G G + ++ K + G D+L+ G + + L
Sbjct: 2672 NSHLLKRGEAGTDTIDLQG-IKADDLSFSWTGVGHDNLVINIGGGPAGDSLTLYQQGVVG 2730
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
E + G N +A T GS+ D+V G + N +SGND+ G +G D
Sbjct: 2731 RVEQIALDGLGTMNFVVAASTGA-IANGSAEADIVFGLTGNETLNGNSGNDILSGGAGND 2789
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEH 333
T + Y+ + A + ++ ++
Sbjct: 2790 TLVGGTGNDQYRFRAGDGADTIIESGDY 2817
Score = 41.7 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 66/496 (13%), Positives = 116/496 (23%), Gaps = 52/496 (10%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ +++ G T+ + I G +
Sbjct: 2336 LALDGMSATNFIVVGAVGGTANAGTGSNIIFGLAGNETLWGNTGTDIIYAGAGNDVLSAG 2395
Query: 141 NGGYP-VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
G V G NDYEN + Y + F T +D+ A Q + G
Sbjct: 2396 TGDDTLVGGTGNDYENGEGGSDRYVYRRGDGADTVEDFSMIVTTAAADVSAAQAL-GVSA 2454
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
N + Q + + + D G D L L + S+S IG N
Sbjct: 2455 SGYTNTWIGGYLWQTSTNSLLKLIDGTGSDTLSLEGGIKADDL------SFSWIGVGGDN 2508
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ +A + G D + + G + ++ +
Sbjct: 2509 LQLA-------IAGGPAGDSIRLDQQK------------TGVAKIEKLQLDGLGPVNLFV 2549
Query: 320 RFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + F LS E L + A + L G D
Sbjct: 2550 APSSGGTISAGSGSNIIFGLSGNESLYGNSGVDVIYGGAGNDWMAGGAGNDTLFGQAGND 2609
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ G ++ + + + G + D
Sbjct: 2610 YLVGQDGDDRYVYRRGDQADSVDDATYAVTTATADINAAAALGVYAGGVVNTWVGGYDWD 2669
Query: 439 AFKA-----LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY----- 488
A + E DL AD G H + G LY
Sbjct: 2670 ATNSHLLKRGEAGTDTIDLQGIKADDLSFSWTGVGHDNLVINIGGGPAGDSLTLYQQGVV 2729
Query: 489 -----------LGSYDDLRNVFGS---DRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
+ G+ A + G + L A ++
Sbjct: 2730 GRVEQIALDGLGTMNFVVAASTGAIANGSAEADIVFGLTGNETLNGNSGNDILSGGAGND 2789
Query: 535 DLINAFADAPDLVQAG 550
L+ + +AG
Sbjct: 2790 TLVGGTGNDQYRFRAG 2805
>gi|157688250|gb|ABQ02442.1| enterohemolysin [Escherichia coli]
Length = 998
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 51/186 (27%), Gaps = 28/186 (15%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G + N I + + + G G+D + G ++ F SGND G G + +
Sbjct: 721 NDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNN--YL 778
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S ++ I+ +L+ +
Sbjct: 779 TGGSGNDELQAHGAYNILSGGT-----------------GDDKLYGGGGIDLLDGGEGND 821
Query: 370 DLIQVIGQDV----FESMKHFYEFGLSEGR-----DITFDSYLYLGSYDDLRNVFGSDRG 420
L G D+ H +G DI+FD + +DL +
Sbjct: 822 YLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLSDISFDDIAFKKVGNDLIMNKAINGA 881
Query: 421 AAARHY 426
+
Sbjct: 882 LSFNES 887
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 29/181 (16%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYR 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKKVGNDLIMNKAINGALSFNESND 889
Query: 370 D 370
Sbjct: 890 V 890
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 56/197 (28%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKKVGNDLI 873
>gi|77464695|ref|YP_354199.1| hemolysin-type calcium-binding region; RTX toxin [Rhodobacter
sphaeroides 2.4.1]
gi|77389113|gb|ABA80298.1| Hemolysin-type calcium-binding region; RTX toxin [Rhodobacter
sphaeroides 2.4.1]
Length = 437
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 79/294 (26%), Gaps = 14/294 (4%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
D+ R G G + + G G + G D D
Sbjct: 74 GNDQLYGNGGNDLVRGGGGADILTGGTGNDLLAGGAGNDSLHGGTGANLLIGGAGDDLLD 133
Query: 157 SFLTSVM-SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
S ++ + ++ A G D + G+ + +
Sbjct: 134 SRWSTDPDRGGLSFETWRAAKIGTGDEMHGGDGNDRIEASFGNDTLTGD---AGDDVIRG 190
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ G D L +G + E S+ G + + + ++G +
Sbjct: 191 QDGDDQLEGGEGQDTL----MGDAGADVLSGGEGDDSLDGGLGDDRLDGGEGSDRLIGGN 246
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GNDV+ G +A +V F G+D G D L + ++ + +
Sbjct: 247 GNDVMDGGAARDVLFGGYGDDQITAGEGDDWVDGGGGDDLIDLGAGDDFVAAIEDLGRGD 306
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D + E + + ++ + L G D F
Sbjct: 307 DVIFGGE------GNDTMLGGRGCDQIDGGEGADVLNGGAGDDFLTGGAGADAF 354
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/308 (14%), Positives = 82/308 (26%), Gaps = 15/308 (4%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
SS+ G + + + + G+ GND+V G ++ +GND+ G +G D+ +
Sbjct: 58 SSLPGGPEGDVLVGLWGNDQLYGNGGNDLVRGGGGADILTGGTGNDLLAGGAGNDSL--H 115
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLS-DVERLRFA--DQCIDSVNVKQRSILEYTAS 367
+ + ++ D E R A + +E +
Sbjct: 116 GGTGANLLIGGAGDDLLDSRWSTDPDRGGLSFETWRAAKIGTGDEMHGGDGNDRIEASFG 175
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ L G DV + EG+D D+ + D
Sbjct: 176 NDTLTGDAGDDVIRGQDGDDQLEGGEGQDTLMGDA-----GADVLSGGEGDDSLD----G 226
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
G + L ++ + A G D + ++ L
Sbjct: 227 GLGDDRLDGGEGSDRLIGGNGNDVMDGGAARDVLFGGYGDDQITAGEGDDWVDGGGGDDL 286
Query: 488 YLGSYDDLRNVFGSDRGAAARH-YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
D D G + G ++ + L D
Sbjct: 287 IDLGAGDDFVAAIEDLGRGDDVIFGGEGNDTMLGGRGCDQIDGGEGADVLNGGAGDDFLT 346
Query: 547 VQAGKDHF 554
AG D F
Sbjct: 347 GGAGADAF 354
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 60/208 (28%), Gaps = 24/208 (11%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+L GG + + + + G N + + + G +GND++ G + N+ +
Sbjct: 59 SLPGGPEGDVLVGLWGNDQLYGNGGNDLVRGGGGADILTGGTGNDLLAGGAGNDSLHGGT 118
Query: 294 GNDVFDGSSGLDTF----------------FYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
G ++ G +G D + A D
Sbjct: 119 GANLLIGGAGDDLLDSRWSTDPDRGGLSFETWRAAKIGTGDEMHGGDGNDRIEASFGNDT 178
Query: 338 LS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
L+ + +R D + + L A + L G D + EG
Sbjct: 179 LTGDAGDDVIRGQDGDDQLEGGEGQDTLMGDAGADVLSGGEGDDSLDGGLGDDRLDGGEG 238
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAA 422
L G+ +D+ + +
Sbjct: 239 -----SDRLIGGNGNDVMDGGAARDVLF 261
>gi|221131235|ref|XP_002155205.1| PREDICTED: similar to PIF/Harbinger-like protein [Hydra
magnipapillata]
Length = 926
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/229 (17%), Positives = 72/229 (31%), Gaps = 51/229 (22%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEE-T 73
++ + W + ++ + L+ N + + A +W V L F E +
Sbjct: 669 YVTQGGKWHKKLLTFQILNYSND--------LSKNQIDKTIKDAFHKWEAVSRLKFTERS 720
Query: 74 SIHSDIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT 118
+ +DIK + P +I+FD +++ +G
Sbjct: 721 NGIADIKIKFTRSNHGDPYPFDGPGGTLAHAFYP-GTHDLSGDIHFDDDELFTLNTMEGK 779
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
LS LHE+GH+LGL H + +D
Sbjct: 780 DLSWVVLHELGHSLGLEHSHEKGAIMYPWYERHDGREIVLHED----------------- 822
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
DI +Q +YG G+ + K + K+ F + + G
Sbjct: 823 --------DIEGIQFLYGKFWEYNGDRLIKGPILTKNIGFTADMVNLDG 863
>gi|83951792|ref|ZP_00960524.1| type I secretion target repeat protein [Roseovarius nubinhibens
ISM]
gi|83836798|gb|EAP76095.1| type I secretion target repeat protein [Roseovarius nubinhibens
ISM]
Length = 1056
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 56/406 (13%), Positives = 102/406 (25%), Gaps = 24/406 (5%)
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
D + +S +V + F T + + G + + Y
Sbjct: 407 TTDADGNSTSGTVNFLDGDGNVTGSMEFAEIETILTDPAAPDGIVSGTAGDDVIDTGYTG 466
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ I + D + G N L + G N T+ +
Sbjct: 467 DPDGDMIDNEDAIIAGEAPN--DDIVRAGDGNDHVLAGLGDDDVEGGAGNDTLDGGVGDD 524
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+ G +GND ++G + N+ G D G G D + ++
Sbjct: 525 SLDGGTGNDSLLGGAGNDTLIGGDGRDTALGGDGDDVIDTGSDFTTRPFPLPDDGYNDPF 584
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D D + + R + A + + + D
Sbjct: 585 DVPADTDTEDDRDYVDGGAGNDTISTGDDRDTILGGAGNDVIDGGLDDDDINGGDGDDYI 644
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
EG D + G+D + V + R+P+ +YI
Sbjct: 645 IAGEGSD-------------TVLGGAGNDTIYGGVNNEAANVPDDRDPELDNGDDYI--- 688
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
D + D + D G D + G +
Sbjct: 689 ---DGGAGDDLIFGEDDNDTILGGEGNDTIDGGIDDDFIRGQDGDDSILGGHGNDSLR-- 743
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+G D +E A ++ +I G+D F
Sbjct: 744 -GGNGDDTILGGDGNDVIEGRADNDLIIGGAGADTMSGDTGRDTFI 788
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/341 (13%), Positives = 87/341 (25%), Gaps = 13/341 (3%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
S +T D +N + D D G+G +
Sbjct: 452 SGTAGDDVIDTGYTGDPDGDMIDNEDAIIAGEAPNDDIVRAGDGNDHVLAGLGDDDVEGG 511
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA- 181
+ +G G + G + + D ++D +
Sbjct: 512 AGNDTLDGGVGDDSLDGGTGNDSLLGGAGNDTLIGGDGRDTALGGDGDDVIDTGSDFTTR 571
Query: 182 -TPMVSDIVAVQKIYGAPKGSLGNNIY----KIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
P+ D A + + Y TI G+D++D L
Sbjct: 572 PFPLPDDGYNDPFDVPADTDTEDDRDYVDGGAGNDTISTGDDRDTILGGAGNDVIDGGLD 631
Query: 237 GGVKNYID-----LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
N D + E ++ G N TI E+ D + N ++
Sbjct: 632 DDDINGGDGDDYIIAGEGSDTVLGGAGNDTIYGGVNNEAANVPDDRDPELDN-GDDYIDG 690
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+G+D+ G DT ++ I + + LR +
Sbjct: 691 GAGDDLIFGEDDNDTI-LGGEGNDTIDGGIDDDFIRGQDGDDSILGGHGNDSLRGGNGDD 749
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ ++E A + +I G D F +
Sbjct: 750 TILGGDGNDVIEGRADNDLIIGGAGADTMSGDTGRDTFIIG 790
Score = 44.0 bits (102), Expect = 0.088, Method: Composition-based stats.
Identities = 62/501 (12%), Positives = 114/501 (22%), Gaps = 54/501 (10%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
++ + D+ F + N+G T + A +L
Sbjct: 157 TQSVGNVDVTFTAHNSGSNDTVFRGDYVDFDGVDAGAGDVNPNSSLDNVLGGA------- 209
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G + Y+ D + F D D A + +
Sbjct: 210 -----------------GNSSTYKFDFSDSVENVSFRINDIDGDGIVKITAFDADGNPIV 252
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY---IDLNT 247
V G+ L + + + L+D+ D N
Sbjct: 253 VNLSGGSNLTMLDTDSVAGVDTADSNGGYGDDSAAEYSVLVDIPGPVSKIVVEHSQDGNA 312
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S + + +++ G G+D ++G N+V G DV DG G DT
Sbjct: 313 TSGIRMSDIYFDQEPVIAEGDDTLSGGEGDDTLLGEGGNDVLTGGEGADVIDGGDGADTI 372
Query: 308 ----------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ + D S + F D +
Sbjct: 373 MGGSDGDVVDGGSGGDDNDTLDLRGLGPVEIVNETTDADGNSTSGTVNFLDGDGNVTGSM 432
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ + +E + + D + D+ +
Sbjct: 433 EFAEIETILTDP----AAPDGIVSGTAGDDVI------DTGYTGDPDGDMIDNEDAIIAG 482
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ G +E A ++ L D G D +
Sbjct: 483 EAPNDDIVRAGDGNDHVLAGLGDDDVEGGAGNDTLDGGVGDDSLDGGTGNDSLLGGAGND 542
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-------DAFKALEYI 530
LG D GSD G + + D ++
Sbjct: 543 TLIGGDGRDTALGGDGDDVIDTGSDFTTRPFPLPDDGYNDPFDVPADTDTEDDRDYVDGG 602
Query: 531 ASHEDLINAFADAPDLVQAGK 551
A ++ + L AG
Sbjct: 603 AGNDTISTGDDRDTILGGAGN 623
Score = 42.1 bits (97), Expect = 0.32, Method: Composition-based stats.
Identities = 37/307 (12%), Positives = 70/307 (22%), Gaps = 12/307 (3%)
Query: 258 KNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ ++A + + +V GND V + ++ F +G+D DG +G D
Sbjct: 64 GDASLAGESGDDDIVNAGDGNDTVSAGAGDDEVFGGAGDDEIDGGAGNDLLLGDRDINDN 123
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
R + + NV + S + + +
Sbjct: 124 IEARGAFRWDQAPDPDGDDGTAGIDTQDDLNGHTQSVGNVDVTFTAHNSGSNDTVFRGDY 183
Query: 377 QDVFESMKH-----------FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
D G FD + + N D
Sbjct: 184 VDFDGVDAGAGDVNPNSSLDNVLGGAGNSSTYKFDFSDSVENVSFRINDIDGDGIVKITA 243
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ G N L + + AD+ + + V+
Sbjct: 244 FDADGNPIVVNLSGGSNLTMLDTDSVAGVDTADSNGGYGDDSAAEYSVLVDIPGPVSKIV 303
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
+ + + SD I G + L ++ L
Sbjct: 304 VEHSQDGNATSGIRMSDIYFDQEPVIAEGDDTLSGGEGDDTLLGEGGNDVLTGGEGADVI 363
Query: 546 LVQAGKD 552
G D
Sbjct: 364 DGGDGAD 370
>gi|89094734|ref|ZP_01167669.1| type I secretion target repeat protein [Oceanospirillum sp. MED92]
gi|89080988|gb|EAR60225.1| type I secretion target repeat protein [Oceanospirillum sp. MED92]
Length = 7971
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 45/341 (13%), Positives = 98/341 (28%), Gaps = 26/341 (7%)
Query: 68 LTFEETSIHSDIKFISSNNG--YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ F+ + SD ++ + S ++F D G G T+++
Sbjct: 165 INFDGGTGGSDGDTVTGTSADTAWNLTGSGSGNAGSLSFSGVDNIAGGEGSDTVVNAAGT 224
Query: 126 HEI-------GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
G G+ G N + +T +S + F
Sbjct: 225 SSWSLTDTYSGSVQGVSFTGVENLSGTAGDTLDYSAYGIGVTVDLSAGVATGFASVTGFD 284
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
+ DI+A G + + T+ DS + +G
Sbjct: 285 HVTGSAHDDIIA-----GNSNSNTLAGGGGTDTLVVTRDADITLSDS--EVRFGSEAVGS 337
Query: 239 VKNYIDLNTESWSSIGGYEK--NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
++ I + + G N ++ T ++ G +G+D + G + + G+D
Sbjct: 338 GEDTISGFEAAELTGGDSGNVINASLFTGTGGVTIDGGAGDDTLTGTANADSIKGGLGSD 397
Query: 297 VFDGSSGLDTFFYYAPSYLYKIY--------RFENAIIVYDANEHKQDFLSDVERLRFAD 348
DG G DT + + + A+ D + + F+
Sbjct: 398 TIDGLGGSDTVVVSRDVNIELTDTKIIIDSVDEDTLSNIETASLTGGDSANTITAATFSK 457
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + +A + + +G D+ + +
Sbjct: 458 GGVTIDGGSGADNITGSAQADLITGGLGADIIDGLGGTDTL 498
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/332 (12%), Positives = 89/332 (26%), Gaps = 19/332 (5%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+N S + D I + EI + LG +
Sbjct: 7121 TPNNYNDTINASGASGSVVIYGGQGNDTLTGSNYGDHIAGGSGNDEI-YGLGGDDHIYGD 7179
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G+ + + L+ V + D+ + + I+G
Sbjct: 7180 AGFNLDLTKRLSLSTQVLSVVNTADAVNDNPETSDALTVGVDTIDGGSGNDIIFG--DKG 7237
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + + + + + D+ G + I GG ++
Sbjct: 7238 VIDQVTDTNRILTTGAVVSVTTTNRDEVANDILKGGADDDIIMGGHGQDDIEGGSGADIL 7297
Query: 262 IAQHTVIESVVGSSGNDVV-------IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
I H V++ G + + + N N+ + G+D+ G G D F
Sbjct: 7298 IGDHAVVDYNDGDTDITTLDSITTVELVNGDNDTIKGNEGDDLIMGGIGADNLFGGNGDA 7357
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRF------ADQCIDSVNVKQRSILEYTASY 368
I ++ II +H L++ +R Q + + A
Sbjct: 7358 GAAIVVSDDDIIF---GDHATALLANNRFVRLLTKEQTEGQADLIKGNEGSDRIFGGAGA 7414
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+D+ G D + + + F
Sbjct: 7415 DDIFGDAGGDWIMGDFGEMKLYSNGNVETFFS 7446
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/233 (14%), Positives = 71/233 (30%), Gaps = 3/233 (1%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G+ ++T+ + + + G S D++ G S +++ +G D DG +G D +
Sbjct: 653 DASGFSGSVTLDAGSGDDILRGGSAADILKGGSGSDILSGGAGEDNIDGGTGNDIL-SES 711
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI-DSVNVKQRSILEYTASYED 370
+ + A + D LS +E ++++ S ++ T
Sbjct: 712 GDRNFYLTSASLLNASNAATSTEDDTLSGIEGAELTGGAGANTIDASGFSNVDATTQLYY 771
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L G + G + +I + + D + A
Sbjct: 772 LNNGFGVGTGVGNDLLIKLGTT-SIEIDLSTANTIQDVLDQITAADASLTAVLDGIAIKV 830
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
G +L ++ +DL F+ + V + G
Sbjct: 831 TSSGDAITEISSLNDTSTAKDLGLTFSGSSASVTGETLGTGSVILSGGAGADT 883
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 57/340 (16%), Positives = 94/340 (27%), Gaps = 59/340 (17%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+D+ V+ + G + VQ I I+ GG D + +T GG + +
Sbjct: 7041 YNDVEVVEVLNGQGNDN-------FTVQSTAEGVITVIHGGGGSDTITVTGGGGASSPLI 7093
Query: 245 LNTESWSSIGGYE------------------KNMTI--AQHTVIESVVGSSGNDVVIGNS 284
L +S Y N TI + + + G GND + G++
Sbjct: 7094 LLGDSVQDGSTYTSTSDVKTDKAREFDTPNNYNDTINASGASGSVVIYGGQGNDTLTGSN 7153
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY---------------- 328
+ SGND G G D + A L R + V
Sbjct: 7154 YGDHIAGGSGNDEIYGLGGDDHIYGDAGFNLDLTKRLSLSTQVLSVVNTADAVNDNPETS 7213
Query: 329 DANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTA------------SYEDLIQV 374
DA D + + F D+ + IL A + + L
Sbjct: 7214 DALTVGVDTIDGGSGNDIIFGDKGVIDQVTDTNRILTTGAVVSVTTTNRDEVANDILKGG 7273
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
D+ + G DI + + D ++ D + +G +
Sbjct: 7274 ADDDIIMGGHGQDDIEGGSGADILIGDHAVVDYNDGDTDITTLDSITTVE--LVNGDNDT 7331
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
+ L D + V D FG
Sbjct: 7332 IKGNEGDDLIMGGIGADNLFGGNGDAGAAIVVSDDDIIFG 7371
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/218 (14%), Positives = 60/218 (27%), Gaps = 29/218 (13%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
I GDD + ++ TE+++ + TI + + V+G
Sbjct: 7470 AGLGEDNITTGSGDDHIIGDNGVLNYGTDEVITEAYTVEHELGDDDTIESGSGDDIVLGG 7529
Query: 275 SGNDVVIGNSANNVFFES-----------------------SGNDVFDGSSGLDTFFYYA 311
GND + ++ N+ G+D SG D A
Sbjct: 7530 KGNDTISVSAGNDSVIGDNGRITFNLGIRDTLESTDTTNDTGGDDNISLGSGDDQAI--A 7587
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ I+ + + + E R+ + D + L + +
Sbjct: 7588 GVGNDTVTNESGETIIIGDDGF----IQNDESGRYLNAYTDDFTLGGDDNLTGGDDRDII 7643
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
G+D + G S + L S D
Sbjct: 7644 FGGFGKDELDGGAGDDLMTGDSGMVTRNPSTIVLESKD 7681
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 44/359 (12%), Positives = 83/359 (23%), Gaps = 27/359 (7%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ + + + D DD L E + +
Sbjct: 583 STDPVDGTTQWTITFTGDLANSDVADLTLDDT-SLVGGTASLAISQYFAEDDTITNVEQA 641
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+T Q I G SG+ + S +++ S D+ G SG D + I
Sbjct: 642 ELTTGQGANIMDASGFSGSVTLDAGSGDDILRGGSAADILKGGSGSDIL--SGGAGEDNI 699
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
I+ ++ + +L+ L + ++ + L E L G +
Sbjct: 700 DGGTGNDILSESGDRNF-YLTSASLLNAS----NAATSTEDDTLSGIEGAE-LTGGAGAN 753
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
++ YL + + G+D +K G
Sbjct: 754 TIDA--------SGFSNVDATTQLYYLNNGFGVGTGVGNDLL----------IKLGTTSI 795
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ L A L V S + DL
Sbjct: 796 EIDLSTANTIQDVLDQITAADASLTAVLDGIAIKVTSSGDAITEISSLNDTSTAKDLGLT 855
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
F + + G + + + G+DH
Sbjct: 856 FSGSSASVTGETLGTGSVILSGGAGADTITGSGGADQISGGLGADVIDGNGGQDHLIET 914
>gi|163734734|ref|ZP_02142173.1| type I secretion target repeat protein [Roseobacter litoralis Och
149]
gi|161392227|gb|EDQ16557.1| type I secretion target repeat protein [Roseobacter litoralis Och
149]
Length = 596
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/325 (14%), Positives = 71/325 (21%), Gaps = 40/325 (12%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ L E+ + EK+ + + + G GND + G+ N+ G D
Sbjct: 209 SDAADVWLGDETSEHVNSGEKDSIVYGRAGDDVLRGGIGNDTLYGDEGNDRLNGGEGEDT 268
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G G DT + N + + D + +RLR A +
Sbjct: 269 ISGGVGDDT-VFGRQGDDDIDGGAGNDNLAGETGNDDIDGGAGDDRLRGASGNDELDGGD 327
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ L G D + +G D F N +
Sbjct: 328 GNDTAFGGEGDDILRGGAGDDALMGNGGADQIFGEDGADTLFGQTGADQMLGGDGNDYMG 387
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
G G L A ++ + D Q G D
Sbjct: 388 GGGGDDVLDGQAGDDTMFGGSNDDTLFGGAGNDLINGQQQDDDLFGQSGNDTL------- 440
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
+ G L S + LI
Sbjct: 441 --------------------------------FGGDGFDLLDGGTGNDTLFGGNSGDTLI 468
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEG 562
G D F E
Sbjct: 469 GGAGIDVMDGGTGFDVFEFNAISES 493
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/227 (13%), Positives = 58/227 (25%), Gaps = 33/227 (14%)
Query: 204 NNIYK--IEVQQKDSPFIQTIYDSGGDDLL--------------DLTLIGGVKNYIDLNT 247
+ +Y + TI GDD + + L G N
Sbjct: 249 DTLYGDEGNDRLNGGEGEDTISGGVGDDTVFGRQGDDDIDGGAGNDNLAGETGNDDIDGG 308
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G N + ++ G G+D++ G + ++ + G D G G DT
Sbjct: 309 AGDDRLRGASGNDELDGGDGNDTAFGGEGDDILRGGAGDDALMGNGGADQIFGEDGADTL 368
Query: 308 FYYAPSYL----------------YKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQC 350
F + + ++ + F + + + Q
Sbjct: 369 FGQTGADQMLGGDGNDYMGGGGGDDVLDGQAGDDTMFGGSNDDTLFGGAGNDLINGQQQD 428
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
D L ++ L G D G D+
Sbjct: 429 DDLFGQSGNDTLFGGDGFDLLDGGTGNDTLFGGNSGDTLIGGAGIDV 475
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/258 (15%), Positives = 75/258 (29%), Gaps = 25/258 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + T+Y G+D L G ++ I ++ G + + I
Sbjct: 238 GDDVLRGGIGNDTLYGDEGNDRL---NGGEGEDTISGGVG-DDTVFGRQGDDDIDGGAGN 293
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRF 321
+++ G +GND + G + ++ +SGND DG G DT F + +
Sbjct: 294 DNLAGETGNDDIDGGAGDDRLRGASGNDELDGGDGNDTAFGGEGDDILRGGAGDDALMGN 353
Query: 322 ENAIIVYDANEHKQDFLSD------------VERLRFADQCIDSVNVKQRSILEYTASYE 369
A ++ E D L + + + ++ +
Sbjct: 354 GGADQIF--GEDGADTLFGQTGADQMLGGDGNDYMGGGGGDDVLDGQAGDDTMFGGSNDD 411
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L G D+ + + G D F + N +
Sbjct: 412 TLFGGAGNDLINGQQQDDDLFGQSGNDTLFGGDGFDLLDGGTGNDTLFGGNSGDTLIGGA 471
Query: 430 GVKEGRNPDAFKALEYIA 447
G+ F E+ A
Sbjct: 472 GIDVMDGGTGFDVFEFNA 489
>gi|27806541|ref|NP_776537.1| interstitial collagenase precursor [Bos taurus]
gi|116851|sp|P28053|MMP1_BOVIN RecName: Full=Interstitial collagenase; AltName: Full=Fibroblast
collagenase; AltName: Full=Matrix metalloproteinase-1;
Short=MMP-1; Flags: Precursor
gi|260|emb|CAA41210.1| preprocollagenase [Bos taurus]
Length = 469
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 54/184 (29%), Gaps = 32/184 (17%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W N + Y+ + T D+ + A WS V LTF + S +DI
Sbjct: 109 WENTNLTYRIENYTPDLSRADVD-------QAIEKAFQLWSNVTPLTFTKVSEGQADIMI 161
Query: 82 IS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
N + P + + +FD + W + L A H
Sbjct: 162 SFVRGDHRDNSPFDGPGGNLAHAFQP--GAGIGGDAHFDDDEWWTSNF-QDYNLYRVAAH 218
Query: 127 EIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
E GH+LGL H + D D Y Q+ TP
Sbjct: 219 EFGHSLGLAHSTDIGALMYPSYTFSGDVQLSQDDIDGIQAIYGPSQNPTQPVG---PQTP 275
Query: 184 MVSD 187
V D
Sbjct: 276 EVCD 279
>gi|317403331|gb|EFV83845.1| hemolysin-type calcium-binding region [Achromobacter xylosoxidans
C54]
Length = 1141
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GGDD + GG + I ++ G + N I + + G GNDV+ G S
Sbjct: 943 GGDDTI----HGGTGDDIIYGQGGNDTLYGDDGNDIIYGGAGDDKLYGGEGNDVLHGGSG 998
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
N+ +GND+ G G DT A S +K +
Sbjct: 999 NDTLEGGNGNDLLIGGKGDDTLIGGAGSDTFKWELGDQGTT 1039
Score = 41.7 bits (96), Expect = 0.41, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 43/187 (22%), Gaps = 18/187 (9%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS-- 302
L S S+ N I + + G + N + +V D+ GS
Sbjct: 848 LQGGSSSTDPAAVGNDIINGGAGHDIIFGDTLNTDGNVLNWASV--GGRPADLVQGSGLK 905
Query: 303 -------GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCID 352
D I + D D + + + +
Sbjct: 906 ALQVFLEMRDGHAPTNGDLYQYIKDHHADFNLADDPRGGDDTIHGGTGDDIIYGQGGNDT 965
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
I+ A + L G DV G D+ D L
Sbjct: 966 LYGDDGNDIIYGGAGDDKLYGGEGNDVLHGGSGNDTLEGGNGNDLLIGGKGD----DTLI 1021
Query: 413 NVFGSDR 419
GSD
Sbjct: 1022 GGAGSDT 1028
Score = 38.6 bits (88), Expect = 3.1, Method: Composition-based stats.
Identities = 68/512 (13%), Positives = 123/512 (24%), Gaps = 39/512 (7%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
++ D F T + NF G
Sbjct: 549 TPSASGQDTSFGFQVRDDGGTANGGKDTSGDYNFAIKTNNFISGDND-----------GS 597
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFL----TSVMSYFMPQDSMMDASFGYCATPMVS 186
G P + G V D + ++ SM +AS T M
Sbjct: 598 GTGTKPPINGGSGDDVILGDKGGTVTTVEPGKNYNIAIVVDTSGSMSEASGTKGLTRMQL 657
Query: 187 DIVAVQKIYGAPKGSLG---NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
I A++ + KG G + E I + S DL+
Sbjct: 658 TIDALKNLANTLKGHDGIVNVALIGFESTASTKYTINGLNASNVGDLIKAIEKLSASGGT 717
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVV--GSSGNDVVIGNSAN-NVFFESSGNDVFDG 300
+ ++ + K T + E+V + G+ +N + + S + +D
Sbjct: 718 NYEGAFDEAVKWFNKQPTSSNGQAFENVTYFLTDGDPTFSNRGSNGDWWSGGSTTNYYDM 777
Query: 301 SSGLDTFFYYAPSYL--YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+D F + ++ + R+ + +
Sbjct: 778 KDAVDKFKGLSGKSTVHAIGIGTGVNEAYLKFFDNSSTTGTGTVRIEGTNITGAVGQPQI 837
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ + A+ +Q + G DI F L G
Sbjct: 838 VNTAKDLAAA---LQGGSSSTDPAAVGNDIINGGAGHDIIFGDTLNTDGNVLNWASVGGR 894
Query: 419 RGAAARHYITHGV------KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ + ++G P +YI H + H
Sbjct: 895 PADLVQGSGLKALQVFLEMRDGHAPTNGDLYQYIKDH--HADFNLADDPRGGDDTIHGGT 952
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
D+ D + G D + Y G LE
Sbjct: 953 GDDIIYGQGGNDTLYGDDGNDIIYGGAGDD-----KLYGGEGNDVLHGGSGNDTLEGGNG 1007
Query: 533 HEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
++ LI D + AG D F ++G +
Sbjct: 1008 NDLLIGGKGDDTLIGGAGSDTFKWELGDQGTT 1039
>gi|296231221|ref|XP_002761064.1| PREDICTED: matrix metalloproteinase-15 [Callithrix jacchus]
Length = 666
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 59/208 (28%), Gaps = 56/208 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + W+N+ + + T + E R A W + L F+E
Sbjct: 134 LTGKKWNNHHLTFSIQNYTQKLGWYHS-------MEAVRRAFRVWEQATPLVFQEVPYED 186
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D + G+ P + D+ +
Sbjct: 187 IRLRRQKEADIMVLFASGFHGDSSPFDGSGGFLAHAYFPGPGLGGDTHFDADEPWTFSNT 246
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
G L A+HE+GHALGL H + + Y D +N
Sbjct: 247 DLNGNNLFLVAVHELGHALGLEHSNNPSAIMAPYYQWKDVDN------------------ 288
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGS 201
F D+ +Q +YG P G
Sbjct: 289 ---FQLPE----DDLQGIQHLYGTPDGR 309
>gi|294677985|ref|YP_003578600.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294476805|gb|ADE86193.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 1073
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 55/489 (11%), Positives = 123/489 (25%), Gaps = 13/489 (2%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ + D G T+ + I G+ N V
Sbjct: 419 FFLTGGAGNDYLLGAALNDRLVGNGGDDTLSGGGGVDAITGGDGVD-LWEANLSEHETNV 477
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN-NIYK 208
+++ + + + + + + T + + +
Sbjct: 478 TINFQTQTTNYGAVISGLERLNYTGTAVRDLITTRSGAYDDNLYLGAGNDSAAVWRGVDA 537
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + + I G Y +T ++ +
Sbjct: 538 VNGAEGEDTLILDWSGIAGATQGITYSYVSNGWYRFSSTSGDQVDFINIEHYDMTGGAGH 597
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S+VG + ND + G + N+ +G V DG +G D + + + +A
Sbjct: 598 DSLVGGTMNDTLRGGAGNDTLDSGAGRAVIDGGAGTDLWRADLSAISAGLRFSASASQTA 657
Query: 329 DANEHKQDFLSDVERLRFADQC----IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ ++E++ ID+ A + + +GQD F+
Sbjct: 658 AQATGSGCDVRNIEQVSLTGGAGADLIDTTGQSGNDWFAGNAGNDTVSLGLGQDGFDGGA 717
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
L Y + N +G A YI L
Sbjct: 718 GVDLLILDYSASTEAIQSRYTSNG---WNRYGEQGDAHFLDYINVERFNVTGGAGADTLI 774
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ + L + G D + + +F + + L +
Sbjct: 775 GAGAADTLTGGAGNDWLNGGAGADVINGGAGVDTWQASF-AGATVAIGLTLSAAGAATVS 833
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIA--SHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
A + A ++ + + + G+ +++ G
Sbjct: 834 GAGTVLTGIEAVSLTTGQNADIVNLSAGTGNDAVATNEGNDTVNLGRGRSEWAD-GGAGT 892
Query: 563 RSITFNPDL 571
S+T N L
Sbjct: 893 DSLTLNASL 901
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/320 (12%), Positives = 81/320 (25%), Gaps = 11/320 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D F+ N + I AD G G + I G+
Sbjct: 747 EQGDAHFLDYINVERFNVTGGAGADTLIGAGAADTLTGGAGNDWLNGGAGADVINGGAGV 806
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ + + + + +++ T + +
Sbjct: 807 ------DTWQASFAGATVAIGLTLSAAGAATVSGAGTVLTGIEAVSLTTGQNADIVNLSA 860
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD--LLDLTLIGGVKNYIDLNTESWSS 252
N + + G D L+ +L ++ ++
Sbjct: 861 GTGNDAVATNE--GNDTVNLGRGRSEWADGGAGTDSLTLNASLATSGLRMDYVSNGAYHI 918
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ ++ GS+ ND + N+ +GND+ +G G DT A
Sbjct: 919 YATDGSYDATFNNFETYNITGSARNDRLYAFGGNDRISTGAGNDILNGGDGNDTLLGGAG 978
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ +++ I A+ D L + L + + + +AS
Sbjct: 979 ADVFQFTNLYGCGIDTIADGAIGDRLR-LSGLALSSIANGAGTTLGAGQIAVSASGGVTT 1037
Query: 373 QVIGQDVFESMKHFYEFGLS 392
IG D S
Sbjct: 1038 LAIGLDGTAGADLTIRLTGS 1057
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/336 (11%), Positives = 82/336 (24%), Gaps = 28/336 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + ++ Y+ F+ D R + + LG
Sbjct: 49 YAGNGFYRFTDYLSSSIDFYNFERFILRGGSGDDDLRGANDVDQLYGGAGADSLTSGLGA 108
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + +T + I A+
Sbjct: 109 DVVNGGAGFDRWTAGYGTVTGNVLITL-------SADPAITQLVAATGARFTQIEALSIT 161
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----------DLTLIGGVKNYI 243
G + + + + G D + D + I I
Sbjct: 162 TGIGDDVINTSAFVGNDDIATGNGSDQVNAGRGVDWINGGEGTDIMVFDWSAITDPSFAI 221
Query: 244 --DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ W + + + G +GND + G + + GND G
Sbjct: 222 RNSYVSNGWYRYAALSGDQVNYINFERYFLTGGAGNDWLSGAGQADRLTGNGGNDTLIGG 281
Query: 302 SGLDTFFYYAPSYLYKIYRFE----NAIIVYDANEHKQDFLSDVERLRFA----DQCIDS 353
+G DT A L+++ + ++ + + LS +ERL + D + +
Sbjct: 282 TGADTIAGGAGIDLWQVDLTDIEANTSVSLVSQTSNTGAVLSGIERLTYTGSAFDDTVVA 341
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ A + + G D
Sbjct: 342 QSGSYNDSFTMGAGDDAVTTGRGVDGANGEAGEDLL 377
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 67/515 (13%), Positives = 116/515 (22%), Gaps = 39/515 (7%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F+ + + T + D G G + +
Sbjct: 479 INFQTQTTNYGAVISGLER-LNYTGTAVRDLITTRSGAYDDNLYLGAGNDSAAVWRGVDA 537
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ A G G Y S S Y T
Sbjct: 538 VNGAEGEDTLILDWSGIAGATQGITYSYVSNGWYRFSSTSGDQVDFINIEHYDMTGGAGH 597
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD--LLDLTLIGGVKNYIDL 245
V G I G D DL+ I +
Sbjct: 598 DSLVGGT--MNDTLRGG---AGNDTLDSGAGRAVIDGGAGTDLWRADLSAISAGLRFSAS 652
Query: 246 NTESWSSIGGYE------KNMTIAQHTVIESV--VGSSGNDVVIGNSANNVFFESSGNDV 297
+++ + G + +++ + + G SGND GN+ N+ G D
Sbjct: 653 ASQTAAQATGSGCDVRNIEQVSLTGGAGADLIDTTGQSGNDWFAGNAGNDTVSLGLGQDG 712
Query: 298 FDGSSGLDTFFYYAPSYLYKI---YRFENAIIVYDANEHKQDFLSDVERLRFADQC--ID 352
FDG +G+D + I Y + + +VER
Sbjct: 713 FDGGAGVDLLILDYSASTEAIQSRYTSNGWNRYGEQGDAHFLDYINVERFNVTGGAGADT 772
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
+ L A + L G DV + S +
Sbjct: 773 LIGAGAADTLTGGAGNDWLNGGAGADVINGGAGVDTWQASFAGATVAIGLTLSAAGAATV 832
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ G+ +T G L ++ + + + G+ +++
Sbjct: 833 SGAGTVLTGIEAVSLTTGQN-----ADIVNLSAGTGNDAVATNEGNDTVNLGRGRSEWAD 887
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFG----------SDRGAAARHYITHGVKEGRNP- 521
G S G D + Y G
Sbjct: 888 GGAGTDSLTLNASLATSGLRMDYVSNGAYHIYATDGSYDATFNNFETYNITGSARNDRLY 947
Query: 522 --DAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ A ++ L + L AG D F
Sbjct: 948 AFGGNDRISTGAGNDILNGGDGNDTLLGGAGADVF 982
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 47/401 (11%), Positives = 98/401 (24%), Gaps = 36/401 (8%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
+ + S D G+G+ + +
Sbjct: 672 QVSLTGGAGADLIDTTGQSGNDWFAGNAGNDTVSLGLGQDGFDGGAGVDLL--------- 722
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+ + + Y ++ + ++ +D + GA
Sbjct: 723 -ILDYSASTEAIQSRYTSNGWNRYGEQGDAHFLDYINVERFNVTGGAGADTL---IGAGA 778
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGY 256
G I G D + G + L+ +++ G
Sbjct: 779 ADTLTGG---AGNDWLNGGAGADVINGGAGVDTWQASFAGATVAIGLTLSAAGAATVSGA 835
Query: 257 EK--------NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG-NDVFDGSSGLDTF 307
++T Q+ I ++ +GND V N N+ G ++ DG +G D+
Sbjct: 836 GTVLTGIEAVSLTTGQNADIVNLSAGTGNDAVATNEGNDTVNLGRGRSEWADGGAGTDSL 895
Query: 308 FYYAPSYLYKI---YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
A + Y A +Y + ++ E + + L
Sbjct: 896 TLNASLATSGLRMDYVSNGAYHIYATDGSYDATFNNFE-------TYNITGSARNDRLYA 948
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ + G D+ G D+ + LY D + + DR +
Sbjct: 949 FGGNDRISTGAGNDILNGGDGNDTLLGGAGADVFQFTNLYGCGIDTIADGAIGDRLRLSG 1008
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
++ + AS A
Sbjct: 1009 LALSSIANGAGTTLGAGQIAVSASGGVTTLAIGLDGTAGAD 1049
>gi|84502932|ref|ZP_01001034.1| type I secretion target repeat protein [Oceanicola batsensis
HTCC2597]
gi|84388677|gb|EAQ01548.1| type I secretion target repeat protein [Oceanicola batsensis
HTCC2597]
Length = 1964
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 59/415 (14%), Positives = 110/415 (26%), Gaps = 33/415 (7%)
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK---GSLGNNIY---KIEVQQ 213
++ D + D G V + A+ G G++ +
Sbjct: 1295 DGIVEGTSGDDVIDDDYEGDPEGDKVDNDDALDPTSGDDDIIEAYSGDDTVIAGSGDDTV 1354
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
P +I + GDD + T +++ + ++ T+ +T +++V
Sbjct: 1355 DGGPGDDSITGNSGDDSI--TSGPDGLPDVEIFPGTPVDSDPFDDRDTVHGNTGNDTIVT 1412
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
DV+ G S +V ND G G D P I + +
Sbjct: 1413 GDDRDVIYGGSGEDVINPGIDNDTVYGGKGDDEII--DPQGADYIEGNSGDDTIIAGIDT 1470
Query: 334 KQDFLSDVERL------------RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D+ D L D + + +++ + +I G D
Sbjct: 1471 FSDYEGDDPNLPNPLYPGVLSDPNTTDGKDTVLGGQGNDLIKTGDDADTIIGGSGDDTLH 1530
Query: 382 SMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
+ G D +Y GS DD N S + P
Sbjct: 1531 GGIDDDYIEGNRGDDEIIGGHGSDTIYGGSGDDRINSGDSSLL-----WGQEPDATDLVP 1585
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ + L Y + D I D + + G ++ +
Sbjct: 1586 ENGRDLVYGGAGNDTIEGQDDDDTIHGGTGFDMIDGGIDDDELYGESGNDTVLGGQGDDT 1645
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G + G + A +DL D + +G D
Sbjct: 1646 IGGGTGRDSLE--GNSGDDVITAGQDHDTVTGGAGDDDLSGNAGDDSLVGGSGDD 1698
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/404 (12%), Positives = 100/404 (24%), Gaps = 35/404 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+G S I D G G +I ++ I + G
Sbjct: 1329 TSGDDDIIEAYSGDDTVIAGSGDDTVDGGPGDDSITGNSGDDSITSGPDGLPDVEIFPGT 1388
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL-- 202
PV D + D+ + + + D +G +++ + +YG
Sbjct: 1389 PVDSDPFD-DRDTVHGNTGNDTIVTGDDRDVIYGGSGEDVINPGIDNDTVYGGKGDDEII 1447
Query: 203 ----GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ I I T D GDD + T+ ++ G +
Sbjct: 1448 DPQGADYIEGNSGDDTIIAGIDTFSDYEGDDPNLPNPLYPGVLSDPNTTDGKDTVLGGQG 1507
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I ++++G SG+D + G ++ + G+D G G DT +
Sbjct: 1508 NDLIKTGDDADTIIGGSGDDTLHGGIDDDYIEGNRGDDEIIGGHGSDTIY---GGSGDDR 1564
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++ +++ D + + + G D
Sbjct: 1565 INSGDSSLLWGQEPDATDLV-------------------------PENGRDLVYGGAGND 1599
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
E G D+ Y + N G
Sbjct: 1600 TIEGQDDDDTIHGGTGFDMIDGGIDDDELYGESGNDTVLGGQGDDTIGGGTGRDSLEGNS 1659
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ H+ + D G D ++
Sbjct: 1660 GDDVITAGQDHDTVTGGAGDDDLSGNAGDDSLVGGSGDDTIDGG 1703
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 45/358 (12%), Positives = 80/358 (22%), Gaps = 54/358 (15%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S D + N T + DV GI T+ EI
Sbjct: 1392 SDPFDDRDTVHGNTGNDTIVTGDDRDVIYGGSGEDVINPGIDNDTVYGGKGDDEI----- 1446
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ E +S ++++
Sbjct: 1447 -----------IDPQGADYIEGNSGDDTIIAGIDTFSDYEGDDPNLPNPLYPG------V 1489
Query: 194 IYGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ + + K TI GDD L G +YI+ N
Sbjct: 1490 LSDPNTTDGKDTVLGGQGNDLIKTGDDADTIIGGSGDDTL---HGGIDDDYIEGNRG-DD 1545
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSG---------NDVVIGNSANNVFFESSGNDVFDGSS 302
I G + TI + + + ++ + ++ + +GND +G
Sbjct: 1546 EIIGGHGSDTIYGGSGDDRINSGDSSLLWGQEPDATDLVPENGRDLVYGGAGNDTIEGQD 1605
Query: 303 GLDTFFYYAPSYLYK-------IYRFENAIIVYDANE----------HKQDFLSDVERLR 345
DT + +Y V + S + +
Sbjct: 1606 DDDTIHGGTGFDMIDGGIDDDELYGESGNDTVLGGQGDDTIGGGTGRDSLEGNSGDDVIT 1665
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
L A + L+ G D + +G D F
Sbjct: 1666 AGQDHDTVTGGAGDDDLSGNAGDDSLVGGSGDDTIDGGGQNDTITGGDGADTMFGGND 1723
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 66/439 (15%), Positives = 119/439 (27%), Gaps = 50/439 (11%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP--MVSDIVAVQKIYGAP 198
N + E D+ +T + S TP + IV Q +Y
Sbjct: 1200 NDAPVAADDSDTTEEDTAVTIDVLGNDTDVDGDTLSIQSVGTPANGTAQIVGGQIVYTPE 1259
Query: 199 KGSLGNNIYKIEVQQKDSPFIQT---------------IYDSGGDDLLDLTLIGG----- 238
G G + ++ V D + + GDD++D G
Sbjct: 1260 AGFEGTDTFEYTVTDPDGLTDTATVTVTVGDGIKPDGIVEGTSGDDVIDDDYEGDPEGDK 1319
Query: 239 --VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG-- 294
+ +D + I Y + T+ + ++V G G+D + GNS ++
Sbjct: 1320 VDNDDALDPTSGDDDIIEAYSGDDTVIAGSGDDTVDGGPGDDSITGNSGDDSITSGPDGL 1379
Query: 295 -NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
+ + +D+ ++ + ++ + E + D+
Sbjct: 1380 PDVEIFPGTPVDS---DPFDDRDTVHGNTGNDTIVTGDDRDVIYGGSGEDVINPGIDNDT 1436
Query: 354 -VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
K + + + G D + F EG D + LY G D
Sbjct: 1437 VYGGKGDDEIIDPQGADYIEGNSGDDTIIA--GIDTFSDYEGDDPNLPNPLYPGVLSDPN 1494
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
G D G + D + + + L D G D
Sbjct: 1495 TTDGKDTVL-----GGQGNDLIKTGDDADTIIGGSGDDTLHGGIDDDYIEGNRGDDEIIG 1549
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
+ +Y GS DD N S T V E + + A
Sbjct: 1550 GHGSD--------TIYGGSGDDRINSGDSSLLWGQEPDATDLVPE----NGRDLVYGGAG 1597
Query: 533 HEDLINAFADAPDLVQAGK 551
++ + D G
Sbjct: 1598 NDTIEGQDDDDTIHGGTGF 1616
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 62/222 (27%), Gaps = 9/222 (4%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL----IGGVK 240
D + +N I + Y D +D
Sbjct: 3 FWDWLKNDHDTSGSGSDSSDNRDGYVDGTSGDDVIGSGYADSDGDRIDAGDALLPGETGD 62
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
I + G + + I V +G+D + G S ++V + G+D +G
Sbjct: 63 QDIVRAGAGNDRVDGGKDDDLILGDVGKGGTVTGAGDDTLRGGSGDDVIHGNGGDDSIEG 122
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+G DT + A + + ++ I + ER F N K
Sbjct: 123 ETGNDTLYGNAGHDHVEGGKGDDVIHGDTDADGGHGGGGSGERESFEWDKAPDPNGKGH- 181
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+ +DL Q+ F E D F++
Sbjct: 182 ----IDNQDDLSGGFTQNTGSVDVTFSVKSTKECPDTNFETD 219
>gi|303251116|ref|ZP_07337302.1| hemolysin A [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307252584|ref|ZP_07534478.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|302650126|gb|EFL80296.1| hemolysin A [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306859906|gb|EFM91925.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 956
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 9/234 (3%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFM--PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G +D +D S Y + Y V D A+ + +
Sbjct: 624 GSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHETIATHQT 683
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++GN KIE +++D F + ++ + N I ++ G
Sbjct: 684 NVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQF-NDIFKGSQFDDVFHGGNGVD 742
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + + + G +G+DV+ G + NN +GND+ G D + + I
Sbjct: 743 TIDGNNGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 321 FENAIIVYDANEHKQDFL-----SDVERLRFADQCIDSVN-VKQRSILEYTASY 368
+ ++ + +D S +E + + + N + + A+Y
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRIGNWFLEDDLASTVANY 856
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 62/212 (29%), Gaps = 61/212 (28%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT----ESWS------------- 251
I G D + + ID S+S
Sbjct: 617 GNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHE 676
Query: 252 SIGGYEKNMT--------------------------------------IAQHTVIESVV- 272
+I ++ N+ I + + + V
Sbjct: 677 TIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQFNDIFKGSQFDDVFH 736
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G D + GN+ ++ F +G+DV DG +G + F + I ++ I
Sbjct: 737 GGNGVDTIDGNNGDDHLFGGAGDDVIDGGNGNN--FLVGGTGNDIISGGKDNDIYVHKTG 794
Query: 333 HKQDFLSDV---ERLRFADQCIDSVNVKQRSI 361
D ++D ++L F+D + + K+
Sbjct: 795 DGNDSITDSGGQDKLAFSDVNLKDLTFKKVDS 826
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 47/197 (23%), Gaps = 38/197 (19%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG---------- 303
N+ ++ T I +GND V S+ V G+D S G
Sbjct: 596 FDDAGNIIESKDTKI-IANLGAGNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDAT 654
Query: 304 --------------LDTFFYYAPSYLYKIYRFENAIIVYDANEHK--------QDFLSDV 341
D+ + ++ + E D L V
Sbjct: 655 AETEKGSYSVKRYVGDSKALHETIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSV 714
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E + + + + + + G D G +
Sbjct: 715 EEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNNGDDHLFGGAGDDVIDGGNGNNFL--- 771
Query: 402 YLYLGSYDDLRNVFGSD 418
G+ +D+ + +
Sbjct: 772 --VGGTGNDIISGGKDN 786
>gi|114325422|gb|AAH19135.2| Matrix metallopeptidase 12 [Mus musculus]
Length = 473
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 62/185 (33%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 113 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 172
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 173 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 229
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H P +D Y + T +S DI +Q
Sbjct: 230 LQHS-----NNPKSIMDPTYRYLNPNTFRLS--------------------ADDIRNIQS 264
Query: 194 IYGAP 198
+YGAP
Sbjct: 265 LYGAP 269
>gi|73853298|ref|YP_308794.1| hemolysin A [Escherichia coli]
gi|73476882|gb|AAZ76497.1| Hemolysin A [Escherichia coli]
Length = 998
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 50/186 (26%), Gaps = 28/186 (15%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G + N I + + + G G+D + G ++ F SGND G G + +
Sbjct: 721 NDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNN--YL 778
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ I+ +L+ +
Sbjct: 779 TGGRGNDELQAHGAYNILSGGT-----------------GDDKLYGGGGIDLLDGGEGND 821
Query: 370 DLIQVIGQDV----FESMKHFYEFGLSEGR-----DITFDSYLYLGSYDDLRNVFGSDRG 420
L G D+ H +G DI+FD + +DL +
Sbjct: 822 YLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLSDISFDDIAFKKVGNDLIMNKAINGA 881
Query: 421 AAARHY 426
+
Sbjct: 882 LSFNES 887
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 48/181 (26%), Gaps = 29/181 (16%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G GND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGRGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYR 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKKVGNDLIMNKAINGALSFNESND 889
Query: 370 D 370
Sbjct: 890 V 890
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 56/197 (28%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGRGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKKVGNDLI 873
>gi|148683761|gb|EDL15708.1| matrix metallopeptidase 28 (epilysin), isoform CRA_e [Mus musculus]
Length = 553
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 52/169 (30%), Gaps = 42/169 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 182 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHA 241
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD + W +G L HEIGH LGL H P P Y
Sbjct: 242 FLPRRGEAHFDGDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRD 301
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+ D++AVQ +YG P G
Sbjct: 302 ALLSWD---------------------------DVLAVQSLYGKPLGRS 323
>gi|113477608|ref|YP_723669.1| hemolysin-type calcium-binding protein [Trichodesmium erythraeum
IMS101]
gi|110168656|gb|ABG53196.1| Hemolysin-type calcium-binding region [Trichodesmium erythraeum
IMS101]
Length = 1287
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 83/275 (30%), Gaps = 16/275 (5%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ I+ GDD++D GG + E SI G + ++ T ++
Sbjct: 894 NNFTGTALSNNIFGLAGDDIID----GGDNSDYISGDEGNDSIFGNSGDDCLSGGTQQDT 949
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY-D 329
++G GND V G S N+ S GND G + D+ I +
Sbjct: 950 MIGGDGNDSVFGGSGNDSILGSQGNDSIFGEADNDSLV--GGDGDDSIIGGAGDDSILGV 1007
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + + +R + +++ + + +I G D
Sbjct: 1008 DGQDSIAGNTGNDTIRSGVDNDSVTGGEGSDLIDGGPNNDTIISGGGADTVLGGSENDSI 1067
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+G DS + D + G D G + D + +
Sbjct: 1068 FGEDGD----DSMVGDDGNDTIDGGSGQDIILGDI-----GDDSIQGGDDNDRINGGLGN 1118
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ + + G D F ++G + D
Sbjct: 1119 DTITGNSGSDRLIGGGGNDLFFYEVADQGIDIILD 1153
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 66/293 (22%), Gaps = 19/293 (6%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + SI G N I + + G GND VIGN N+ +D
Sbjct: 309 GSSQGDVIFGAGGDDSIFGEASNDEIRGDADNDFINGGRGNDTVIGNPGNDNVRGGKDDD 368
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ G G D F + + ++ + +
Sbjct: 369 LVLGEDGNDLLF--GDRENDIVNGGDGRDTIFGGKDD-----------------DNVSGD 409
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ + + G D + G D+ + N
Sbjct: 410 AGDDFVYGDKGDDAVTGGNGNDSVFGGEGNDNVNGDAGEDVLSGGLGVDRLFGGDGNDTL 469
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ + G L ++ + + G D
Sbjct: 470 FGEEDNDQAFGGSGNDSIFGGSGADLLSGNEDNDTINGGDGNDQVQGDSGNDSLGGGLGT 529
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
+ + + S ++ A + + G + Y
Sbjct: 530 DTLIGGEGNDTFFISPENGALEVFDADVIADFNNNIDLISLGGGLGFNDLVIY 582
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/305 (16%), Positives = 87/305 (28%), Gaps = 17/305 (5%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFIS 83
++ F + T+ + +I N A A F S D+ F +
Sbjct: 263 TDSFSYETSNGTTSSLATVNIKVFNEGAPIRVEGAFRGTPDN---EFLIGSSQGDVIFGA 319
Query: 84 SNN------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
+ R D+ D G + + G
Sbjct: 320 GGDDSIFGEASNDEIRGDADNDFINGGRGNDTVIGNPGNDNVRGGKDDDLVLGEDGNDLL 379
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
V G D D+ + D+ D +G V+ ++G
Sbjct: 380 FGDRENDIVNGGDG---RDTIFGGKDDDNVSGDAGDDFVYGDKGDDAVTGGNGNDSVFGG 436
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
N +V + ++ G+D L G N SI G
Sbjct: 437 EGNDNVNGDAGEDV-LSGGLGVDRLFGGDGNDTL----FGEEDNDQAFGGSGNDSIFGGS 491
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
++ + +++ G GND V G+S N+ G D G G DTFF + +
Sbjct: 492 GADLLSGNEDNDTINGGDGNDQVQGDSGNDSLGGGLGTDTLIGGEGNDTFFISPENGALE 551
Query: 318 IYRFE 322
++ +
Sbjct: 552 VFDAD 556
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 79/285 (27%), Gaps = 10/285 (3%)
Query: 83 SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
+ + + D +D G +I ++ + +G
Sbjct: 896 FTGTALSNNIFGLAGDDIIDGGDNSDYISGDEGNDSIFGNSGDDCLSGGTQQDTMIGGDG 955
Query: 143 GYPVYG-VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV----QKIYGA 197
V+G ND S + DS++ D + Q
Sbjct: 956 NDSVFGGSGNDSILGSQGNDSIFGEADNDSLVGGDGDDSIIGGAGDDSILGVDGQDSIAG 1015
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSS 252
G+ I +D + GG +N + S
Sbjct: 1016 NTGNDTIRSGVDNDSVTGGEGSDLIDGGPNNDTIISGGGADTVLGGSENDSIFGEDGDDS 1075
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N TI + + ++G G+D + G N+ GND G+SG D
Sbjct: 1076 MVGDDGNDTIDGGSGQDIILGDIGDDSIQGGDDNDRINGGLGNDTITGNSGSDRLIGGGG 1135
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ L+ + I + + K D + F D +
Sbjct: 1136 NDLFFYEVADQGIDIILDFDSKGDDKFLFTSVNFGGLNNDDFSNN 1180
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 44/333 (13%), Positives = 79/333 (23%), Gaps = 63/333 (18%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + + + G+ G+D + G ++N+ + ND +G G DT
Sbjct: 300 GTPDNEFLIGSSQGDVIFGAGGDDSIFGEASNDEIRGDADNDFINGGRGNDTVI------ 353
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQ 373
V + D L F D+ D VN R + +++
Sbjct: 354 -----GNPGNDNVRGGKDDDLVLGEDGNDLLFGDRENDIVNGGDGRDTIFGGKDDDNVSG 408
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D K G D F D S R + G
Sbjct: 409 DAGDDFVYGDKGDDAVTGGNGNDSVFGGEGNDNVNGDAGEDVLSGGLGVDRLFGGDGNDT 468
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
+ + ++ + D +
Sbjct: 469 LFGEEDNDQAFGGSGNDSIFGGSGADLLSGNEDNDTINGG-------------------- 508
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
D ++ + ++ L + G D
Sbjct: 509 ----------------------------DGNDQVQGDSGNDSLGGGLGTDTLIGGEGNDT 540
Query: 554 FSNFGYEEGRSITFNPD--LYLTSYDDLWNVFG 584
F G F+ D + DL ++ G
Sbjct: 541 FFISPEN-GALEVFDADVIADFNNNIDLISLGG 572
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/421 (11%), Positives = 108/421 (25%), Gaps = 56/421 (13%)
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI-YGAPKGSLGNNIYKIEVQQK 214
DS + + S + D T + D + + G+ + + +
Sbjct: 787 DSGINFITSNNLQVSYADDIPDDLTLTYTIEDAPDLGILRKGSSRLRKEDT--FTQQDID 844
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN----TESWSSIGGYEKNMTIAQHTVIES 270
+ T D+ G+D T+ + L + + K + +
Sbjct: 845 SNLLQFTPDDTAGNDFFSYTVSDTYGGKVPLTSFSIGIADDTRTLTNKANNFTGTALSNN 904
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +G+D++ G ++ GND G+SG D + + + V+
Sbjct: 905 IFGLAGDDIIDGGDNSDYISGDEGNDSIFGNSGDDCL--SGGTQQDTMIGGDGNDSVFGG 962
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + + + L + +I G D +
Sbjct: 963 S--------GNDSILGSQGNDSIFGEADNDSLVGGDGDDSIIGGAGDDSILGVDGQDSIA 1014
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
+ G D D + GSD +
Sbjct: 1015 GNTGNDTIRSGV----DNDSVTGGEGSDLIDG------------------------GPNN 1046
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
D I + A ++ ++ + V D + + G + +
Sbjct: 1047 DTIISGGGADTVLGGSENDSIFGEDGDDSMVGDDGNDTIDGGSGQDIILGDIGDDSIQ-- 1104
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
D + ++ + + G D F ++G I + D
Sbjct: 1105 ---------GGDDNDRINGGLGNDTITGNSGSDRLIGGGGNDLFFYEVADQGIDIILDFD 1155
Query: 571 L 571
Sbjct: 1156 S 1156
Score = 40.5 bits (93), Expect = 0.82, Method: Composition-based stats.
Identities = 34/254 (13%), Positives = 60/254 (23%), Gaps = 16/254 (6%)
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL----SDVERLRFADQCIDSVNVKQ 358
G D+F Y + N + + + + D E L + Q
Sbjct: 262 GTDSFSYETSNGTTSSLATVNIKVFNEGAPIRVEGAFRGTPDNEFLIGSSQGDVIFGAGG 321
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ AS +++ D + + G D + G DDL +
Sbjct: 322 DDSIFGEASNDEIRGDADNDFINGGRGNDTVIGNPGND-----NVRGGKDDDLVLGEDGN 376
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+ G +E + + I +D N DA D G G
Sbjct: 377 D-------LLFGDRENDIVNGGDGRDTIFGGKDDDNVSGDAGDDFVYGDKGDDAVTGGNG 429
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
F D S R + G + + ++ +
Sbjct: 430 NDSVFGGEGNDNVNGDAGEDVLSGGLGVDRLFGGDGNDTLFGEEDNDQAFGGSGNDSIFG 489
Query: 539 AFADAPDLVQAGKD 552
D
Sbjct: 490 GSGADLLSGNEDND 503
>gi|126738170|ref|ZP_01753891.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
gi|126720667|gb|EBA17372.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
Length = 1012
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 71/248 (28%), Gaps = 14/248 (5%)
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
D + SV++ + D + A D +++ G G +
Sbjct: 358 SDDTSITTSTDGNSVVATGSEMNDYTDQDGWFSAQF--EDRSSIEFTLQTRDGYSGFTLS 415
Query: 208 K----IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEK 258
V T+ GDD++ D +L+G + + G
Sbjct: 416 GSLIDDPVTTPLEQGHDTVMAGDGDDIVYGQGGDDSLMGDEGDDSLDGGGGDDVLEGGTG 475
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ T+ +++ G G+D + G ++ GND G G DT +
Sbjct: 476 SDTLIGGAGGDTLSGGDGDDYIEGGLGDDSLTTGLGNDTLIGGEGNDTLRNSEGDDS-LV 534
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL--IQVIG 376
+ I+ + + + L D ++ A + G
Sbjct: 535 GGAGDDSIIASGGNDTLEGNAGFDTLIGGDDNDILRGGADADLMYGDADSDTFEMTDGFG 594
Query: 377 QDVFESMK 384
D E +
Sbjct: 595 NDTLEGGE 602
Score = 39.4 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 37/124 (29%), Gaps = 7/124 (5%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + + + T + + G+D V G +++ GNDV G G +
Sbjct: 172 YGSDDDDQMGGSTSDDYIDAGGGSDTVAGQEGHDIIDAGEGNDVIYGDMGD---GFDQGV 228
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLI 372
+ + H D S F++ + ++ S D+
Sbjct: 229 DASPLSLELGNLQSV---SHDGDLGSAGNFAVFSNVATLADGTQISGRLVLVEKSNPDMW 285
Query: 373 QVIG 376
G
Sbjct: 286 VEFG 289
>gi|148683760|gb|EDL15707.1| matrix metallopeptidase 28 (epilysin), isoform CRA_d [Mus musculus]
Length = 543
Score = 67.5 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 52/169 (30%), Gaps = 42/169 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 182 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHA 241
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD + W +G L HEIGH LGL H P P Y
Sbjct: 242 FLPRRGEAHFDGDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRD 301
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+ D++AVQ +YG P G
Sbjct: 302 ALLSWD---------------------------DVLAVQSLYGKPLGRS 323
>gi|119351065|gb|ABL63428.1| matrix metalloproteinase 28 [Rattus norvegicus]
Length = 507
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 53/169 (31%), Gaps = 42/169 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHA 208
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD+ + W +G L HEIGH LGL H P P Y
Sbjct: 209 FLPRRGEAHFDQDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRD 268
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+ D++AVQ +YG P G
Sbjct: 269 ALLSWD---------------------------DVLAVQNLYGKPLGRS 290
>gi|120586977|ref|NP_001073357.1| matrix metalloproteinase-28 [Rattus norvegicus]
gi|119351063|gb|ABL63427.1| matrix metalloproteinase 28 [Rattus norvegicus]
Length = 525
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 53/169 (31%), Gaps = 42/169 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHA 208
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD+ + W +G L HEIGH LGL H P P Y
Sbjct: 209 FLPRRGEAHFDQDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRD 268
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+ D++AVQ +YG P G
Sbjct: 269 ALLSWD---------------------------DVLAVQNLYGKPLGRS 290
>gi|291302527|ref|YP_003513805.1| hypothetical protein Snas_5076 [Stackebrandtia nassauensis DSM
44728]
gi|290571747|gb|ADD44712.1| hypothetical protein Snas_5076 [Stackebrandtia nassauensis DSM
44728]
Length = 736
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/253 (16%), Positives = 76/253 (30%), Gaps = 21/253 (8%)
Query: 199 KGSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GN+ Q T+ D GG++ D++ G T S I
Sbjct: 338 STGTGNDSVTSGEGNDQISTYDGDDTVLDVGGNN--DVSTGSGKDAID---TAGSSRIYA 392
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E + T+ + ++VV G D V + +++ F G D DG G DT
Sbjct: 393 GEGDDTVDGGSGNDAVVAGDGADRVKTHGGDDLVFGGRGTDYIDGQDGNDTL--EGGDSQ 450
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
IY + ++ +D L A ++ +D ++
Sbjct: 451 DHIYGLDGDDKIHGG--AGRDNLEG------AQGNDTIDGGSGEDLVSGGYGDDD-LRGG 501
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D + +G D +F S D + + G +E +
Sbjct: 502 GDDKLYAGGGRDTVDGGDGTDESFSQGEDTVSGDTEKT--TDTKIVNTDFIKVEGSEEFQ 559
Query: 436 NPDAFKALEYIAS 448
+ +S
Sbjct: 560 DRVRADLDMLGSS 572
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 56/239 (23%), Gaps = 23/239 (9%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
T+ G+D D+ G L I + A ++G G+D V
Sbjct: 272 TLRGGDGNDSFDVDAKGVQVTT--LGGAGNDKIFAGMP-VFAADRDGNNVIIGGDGDDKV 328
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
NN +GND G D + V +
Sbjct: 329 FAVGDNNRISTGTGNDSVTSGEGNDQI--STYDGDDTVLDVGGNNDVSTGSGK------- 379
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
D+++ S + + + G D + G D+ F
Sbjct: 380 -----------DAIDTAGSSRIYAGEGDDTVDGGSGNDAVVAGDGADRVKTHGGDDLVFG 428
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
N + Y G + LE ++ + +
Sbjct: 429 GRGTDYIDGQDGNDTLEGGDSQDHIYGLDGDDKIHGGAGRDNLEGAQGNDTIDGGSGED 487
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 38/333 (11%), Positives = 83/333 (24%), Gaps = 32/333 (9%)
Query: 237 GGVKNYIDLNTES---WSSIGGYEKNMTIAQHTVIESVVGSSGN-------DVVIGNSAN 286
G + DL ES + +I + + + T ++V + + + +
Sbjct: 202 SGKQQPFDLPPESKKPFQTITLPDGRVIVNTGTGDDNVKVTKDDKGNIVVTKDLGNGNNE 261
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
N + N G G D+F A ++
Sbjct: 262 NWVYPPGTNITLRGGDGNDSFDVDAKGVQVTTLGGAGNDKIFAGMPV---------FAAD 312
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
D + + + G D S + + +G D D +G
Sbjct: 313 RDGNNVIIGGDGDDKVFAVGDNNRISTGTGNDSVTSGEGNDQISTYDGDDTVLD----VG 368
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+D+ G D T G + ++ + ++ ++ G
Sbjct: 369 GNNDVSTGSGKDAID------TAGSSRIYAGEGDDTVDGGSGNDAVVAGDGADRVKTHGG 422
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
D FG ++ D ++ G H G
Sbjct: 423 DD--LVFGGRGTDYIDGQDGNDTLEGGDSQDHIYGLDGDDKIH-GGAGRDNLEGAQGNDT 479
Query: 527 LEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
++ + + + + D ++ G
Sbjct: 480 IDGGSGEDLVSGGYGDDDLRGGGDDKLYAGGGR 512
>gi|29470157|gb|AAO74635.1| ApxIIA [Actinobacillus pleuropneumoniae]
Length = 956
Score = 67.5 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 81/234 (34%), Gaps = 9/234 (3%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFM--PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G +D +D S Y + Y V D A+ + +
Sbjct: 624 GSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHETIATHQT 683
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++GN KIE +++D F + ++ + N I ++ G
Sbjct: 684 NVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQF-NDIFKGSQFDDVFHGGNGVD 742
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + + + G +G+DV+ G + NN +GND+ G D + + I
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 321 FENAIIVYDANEHKQDFL-----SDVERLRFADQCIDSVN-VKQRSILEYTASY 368
+ + ++ + +D S +E + + + N + + A+Y
Sbjct: 803 SDGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRIGNWFLEDDLASTVANY 856
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 61/212 (28%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT----ESWS------------- 251
I G D + + ID S+S
Sbjct: 617 GNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHE 676
Query: 252 SIGGYEKNMT--------------------------------------IAQHTVIESVV- 272
+I ++ N+ I + + + V
Sbjct: 677 TIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQFNDIFKGSQFDDVFH 736
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G D + GN ++ F +G+DV DG +G + F + I ++ I
Sbjct: 737 GGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNN--FLVGGTGNDIISGGKDNDIYVHKTG 794
Query: 333 HKQDFLSDV---ERLRFADQCIDSVNVKQRSI 361
D ++D ++L F+D + + K+
Sbjct: 795 DGNDSITDSDGQDKLAFSDVNLKDLTFKKVDS 826
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 47/197 (23%), Gaps = 38/197 (19%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG---------- 303
N+ ++ T I +GND V S+ V G+D S G
Sbjct: 596 FDDAGNIIESKDTKI-IANLGAGNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDAT 654
Query: 304 --------------LDTFFYYAPSYLYKIYRFENAIIVYDANEHK--------QDFLSDV 341
D+ + ++ + E D L V
Sbjct: 655 AETEKGSYSVKRYVGDSKALHETIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSV 714
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E + + + + + + G D G +
Sbjct: 715 EEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFL--- 771
Query: 402 YLYLGSYDDLRNVFGSD 418
G+ +D+ + +
Sbjct: 772 --VGGTGNDIISGGKDN 786
>gi|146276412|ref|YP_001166571.1| hemolysin-type calcium-binding region [Rhodobacter sphaeroides ATCC
17025]
gi|145554653|gb|ABP69266.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides ATCC
17025]
Length = 243
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 15/181 (8%)
Query: 221 TIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
TI +G + L+ + G I G + + + ++++G
Sbjct: 3 TIIGNGSANRLNGSNLNDIIRGLDGEDTIFGNGGRDRIEGNDDDDLLYGGAGADTILGGK 62
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
G D + G +++ + SGND F G +G DT A + A ++ + +
Sbjct: 63 GEDRLYGQGGDDLMTDESGNDRFFGGAGNDTIR--AGEGNDLLDGGTGADLLVAGSGNDT 120
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
LR D + + A + + G DV + EG
Sbjct: 121 --------LRGGDGADRLHGGEGNDRMSGGAGNDRMWGGEGDDVLNGGRGNDVMIGGEGD 172
Query: 396 D 396
D
Sbjct: 173 D 173
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 48/170 (28%), Gaps = 11/170 (6%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
S I G+D + G + + G TI + + G
Sbjct: 14 NGSNLNDIIRGLDGEDTI----FGNGGRDRIEGNDDDDLLYGGAGADTILGGKGEDRLYG 69
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G+D++ S N+ FF +GND G D + + +
Sbjct: 70 QGGDDLMTDESGNDRFFGGAGNDTIRAGEGND--LLDGGTGADLLVAGSGNDTLRGG--D 125
Query: 334 KQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L E R+ + +L + +I G D F
Sbjct: 126 GADRLHGGEGNDRMSGGAGNDRMWGGEGDDVLNGGRGNDVMIGGEGDDRF 175
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 52/150 (34%), Gaps = 4/150 (2%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ TI G+DLLD GG + + ++ G + +
Sbjct: 77 TDESGNDRFFGGAGNDTIRAGEGNDLLD----GGTGADLLVAGSGNDTLRGGDGADRLHG 132
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G +GND + G ++V GNDV G G D F + + + + + ++
Sbjct: 133 GEGNDRMSGGAGNDRMWGGEGDDVLNGGRGNDVMIGGEGDDRFVFNFGADVIRDFDDDDD 192
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSV 354
I + + + R D I
Sbjct: 193 KIDLSSFGLTYAQVMNRTVERGEDVLIRIG 222
Score = 52.5 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/188 (11%), Positives = 46/188 (24%), Gaps = 10/188 (5%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+++G+ + + G++ N++ G D G+ G D +Y A +
Sbjct: 3 TIIGNGSANRLNGSNLNDIIRGLDGEDTIFGNGGRDRI--EGNDDDDLLYGGAGADTILG 60
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+RL + A + + G D+ +
Sbjct: 61 G--------KGEDRLYGQGGDDLMTDESGNDRFFGGAGNDTIRAGEGNDLLDGGTGADLL 112
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G D + N S R + G +
Sbjct: 113 VAGSGNDTLRGGDGADRLHGGEGNDRMSGGAGNDRMWGGEGDDVLNGGRGNDVMIGGEGD 172
Query: 450 EDLINAFA 457
+ + F
Sbjct: 173 DRFVFNFG 180
>gi|87122890|ref|ZP_01078758.1| hypothetical protein MED121_03691 [Marinomonas sp. MED121]
gi|86161841|gb|EAQ63138.1| hypothetical protein MED121_03691 [Marinomonas sp. MED121]
Length = 2789
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 60/195 (30%), Gaps = 6/195 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I DSG +D D G +YI+ + + I G N + +
Sbjct: 2512 WKANNIVGDSNNNIIDSGSND--DTVYGQGGDDYIEGQSGA-DYIDGGSGNDYLDGGSQD 2568
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G ND +IG S ++ G+D +G S D + + +
Sbjct: 2569 DTIYGGDDNDHLIGQSGDDYLSGEDGDDWLEGGSNDDDLY--GGDGSDLLEGDTGDDYLS 2626
Query: 329 DANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + + + L + L A + L+ G D
Sbjct: 2627 GGDGDDLLYAGENSDTLLGDAGDDILMGEGGSDSLSGGADDDILVGGTGSDTLTGGTGAD 2686
Query: 388 EFGLSEGRDITFDSY 402
F L + D D
Sbjct: 2687 MFVLEDTNDTITDFD 2701
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 81/270 (30%), Gaps = 14/270 (5%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D++ D+ + + + G + + +
Sbjct: 2442 DVQLSDDGGANYNVLGSDAYPTSYTSDNAGESASSGYVQDITSLDDRIAAFTQDDASYGQ 2501
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA----VQK 193
+ N+ DS + S Y +D +
Sbjct: 2502 NGSDQYVHKDWKANNIVGDSNNNIIDSGSNDDTVYGQGGDDYIEGQSGADYIDGGSGNDY 2561
Query: 194 IYGAPKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLN 246
+ G + + IY + + GDD L D L GG + +
Sbjct: 2562 LDGGSQD---DTIYGGDDNDHLIGQSGDDYLSGEDGDDWLEGGSNDDDLYGGDGSDLLEG 2618
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G + + + ++++G +G+D+++G ++ + +D+ G +G DT
Sbjct: 2619 DTGDDYLSGGDGDDLLYAGENSDTLLGDAGDDILMGEGGSDSLSGGADDDILVGGTGSDT 2678
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+ ++ + + I +DA E D
Sbjct: 2679 LTGGTGADMFVLEDTNDTITDFDAAEDSLD 2708
Score = 39.0 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 24/220 (10%), Positives = 48/220 (21%), Gaps = 18/220 (8%)
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
S ++ + +D G +G D + + + N II +N+
Sbjct: 2483 TSLDDRIAAFTQDDASYGQNGSDQYVHKDWKANNIVGDSNNNIIDSGSNDD--------- 2533
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+E + + + G D + + D
Sbjct: 2534 ---------TVYGQGGDDYIEGQSGADYIDGGSGNDYLDGGSQDDTIYGGDDNDHLIGQS 2584
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
+ + + Y G L + L L
Sbjct: 2585 GDDYLSGEDGDDWLEGGSNDDDLYGGDGSDLLEGDTGDDYLSGGDGDDLLYAGENSDTLL 2644
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
G D G + D + +G G+
Sbjct: 2645 GDAGDDILMGEGGSDSLSGGADDDILVGGTGSDTLTGGTG 2684
>gi|320158794|ref|YP_004191172.1| autotransporter adhesin [Vibrio vulnificus MO6-24/O]
gi|319934106|gb|ADV88969.1| autotransporter adhesin [Vibrio vulnificus MO6-24/O]
Length = 4703
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 58/220 (26%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4326 DFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI 4385
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4386 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4444
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D ++ S G D+
Sbjct: 4445 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNYNRINASAGNDVVK 4504
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N + A G
Sbjct: 4505 -----LMGYHAVLNGGEGEDHLIAAAISKFSQFNGGEGRD 4539
Score = 38.2 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 42/295 (14%), Positives = 72/295 (24%), Gaps = 38/295 (12%)
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
Y +Y D S+++ + + V I A
Sbjct: 6 WRSVEYFFTGNYSADDGNNSIVAIGFGGEIHAYGGDDHVT---VGSIGATVYTGSGNDTV 62
Query: 202 LGNNIY----------------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+G + Y K S + + G +D G +Y
Sbjct: 63 VGGSAYLRVEDTTGHLSVKGAAGYADINKSSDGNVSFAGAAGGVSIDHLGNHGDVSYGGA 122
Query: 246 NTESWSSIGGYEKNMTI--AQHTVIESVVGSSGNDVVIGNSANNVFF--------ESSGN 295
+ + G N+T A + GN G A N S G+
Sbjct: 123 AAYNGITRKGLSGNVTFKGAGGYNALWHETNQGNLSFAGAGAGNKLDRTWFNRYQGSRGD 182
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD------VERLRFADQ 349
FDG+ ++ + + + L +ER R
Sbjct: 183 VTFDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTR--QA 240
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQ-DVFESMKHFYEFGLSEGRDITFDSYL 403
+ E Y L + D+ S Y +G +FD+
Sbjct: 241 EDVYAQTRGNIRFEGVGGYNSLYSDVAHGDIHFSGGGAYNTITRKGSGSSFDAQG 295
>gi|241205215|ref|YP_002976311.1| Cadherin [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240859105|gb|ACS56772.1| Cadherin [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 942
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 49/284 (17%), Positives = 86/284 (30%), Gaps = 15/284 (5%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
S N + D D++ G G I ++ + G +
Sbjct: 458 SGNAFGIDVTTGGGNDQLEGTDGNDIFDGGAGNDVIDGYSGNDVLRGGAGDDTITDGDDY 517
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV-------QKIYG 196
D D N + +V + S T ++ + ++ G
Sbjct: 518 ADAKIFDIDAGNGNDTVTVFRGSDVEASGTLNGGADTDTLQAYNLSGLTIQNFEILELGG 577
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A + P ++I D + D + I G
Sbjct: 578 AGAIGSAAQFESFDKIVVYEPGYESIISLTLTD-------SAHVDLSDELATRSAYISGT 630
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ +A + + G+ GND+ G + N+ GND+ G +G+DT + Y
Sbjct: 631 AFGIDVATGGGSDQLEGTDGNDIFDGGAGNDRIDGYGGNDMLFGGTGIDTAVFSGDFASY 690
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+N + + +D L+DVE RFAD D S
Sbjct: 691 SF-AIDNGSHILTSALEGKDTLTDVEFARFADGVYDFATETFTS 733
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 60/358 (16%), Positives = 106/358 (29%), Gaps = 19/358 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+L + + + + S I G+D + GG N E ++ G +
Sbjct: 46 TINLADELDSVSAEITGSSSANAITTGRGNDTI----SGGNGNDTLNGGEGNDTLNGDDG 101
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
T+ +++ G +GND + G N+ GND +G +G DT A K
Sbjct: 102 ADTLNGGAGEDTIRGGAGNDTLNGGDGNDTLDGGQGNDKINGGAGNDTITDSAHFNTPKT 161
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ L+ V ++ +T ++++ G
Sbjct: 162 TIDAGDGDDKVIILASDESLTG----AIDGGNGIDVLSGLNNLTAFTIQNFEILETGGIH 217
Query: 379 VFESMKHFYEFGLSE-GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE-GRN 436
+ S F F G + +DS + D +V SD AA R IT
Sbjct: 218 LAGSAAQFESFDKIIYGDNPIYDSSVISLILADGVHVDLSDELAARRTSITGTAFGIDVT 277
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
A + D+ + A L + G D D +R
Sbjct: 278 TGAGNDNFVGTAGNDIFDGGAGNDTLHGNAGNDLLTGGE------GNDQVYGGAGNDVIR 331
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF---ADAPDLVQAGK 551
G+D + V + D + ++ + D +QA
Sbjct: 332 GGTGNDTIGDGDFFGPPEVFDIDGGDGNDTVNLQIAYSIENSGIVDGGADTDTLQAYN 389
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/329 (12%), Positives = 77/329 (23%), Gaps = 65/329 (19%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ T+ G+D L D G ++ I ++ G +
Sbjct: 70 TTGRGNDTISGGNGNDTLNGGEGNDTLNGDDGADTLNGGAGEDTIRGGAG-NDTLNGGDG 128
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANN----VFFESSGND-------------VFDGS 301
N T+ + + G +GND + ++ N G+D DG
Sbjct: 129 NDTLDGGQGNDKINGGAGNDTITDSAHFNTPKTTIDAGDGDDKVIILASDESLTGAIDGG 188
Query: 302 SGLDTFFYYAPSYLYKIYRFE------------------------NAIIVYDANEHKQDF 337
+G+D + I FE +YD++
Sbjct: 189 NGIDVLSGLNNLTAFTIQNFEILETGGIHLAGSAAQFESFDKIIYGDNPIYDSSVISLIL 248
Query: 338 LSDVE------------RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
V + ID TA + G D
Sbjct: 249 ADGVHVDLSDELAARRTSITGTAFGIDVTTGAGNDNFVGTAGNDIFDGGAGNDTLHGNAG 308
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
EG D +Y G+ +D+ + + +
Sbjct: 309 NDLLTGGEGND-----QVYGGAGNDVIRGGTGNDTIGDGDFFGPPEVFDIDGGDGNDTVN 363
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFG 474
+ + N+ ++ G
Sbjct: 364 LQIAYSIENSGIVDGGADTDTLQAYNLTG 392
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 75/253 (29%), Gaps = 4/253 (1%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ D+ G G + I G
Sbjct: 277 TTGAGNDNFVGTAGNDIFDGGAGNDTLHGNAGNDLLTGGEGNDQVYGGAGNDVIRGGTGN 336
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + P D D + + ++ + ++S + T ++ +
Sbjct: 337 DTIGDGDFFGPPEVFDIDGGDGNDTVNLQIAYSIENSGIVDGGADTDTLQAYNLTGLTIK 396
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS-- 252
+ G Q + I +YD D ++L ++DL E +
Sbjct: 397 NFEILETGGMETIGSAAQFESFEKI-VVYDDPNYDSYAISLKLTDGVHVDLAGELATRSA 455
Query: 253 -IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
I G + + + + G+ GND+ G + N+V SGNDV G +G DT
Sbjct: 456 HISGNAFGIDVTTGGGNDQLEGTDGNDIFDGGAGNDVIDGYSGNDVLRGGAGDDTITDGD 515
Query: 312 PSYLYKIYRFENA 324
KI+ +
Sbjct: 516 DYADAKIFDIDAG 528
Score = 45.2 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 77/588 (13%), Positives = 131/588 (22%), Gaps = 105/588 (17%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + T R + D D G G I I +
Sbjct: 98 GDDGADTLNGGAGEDTIRGGAGNDTLNGGDGNDTLDGGQGNDKINGGAGNDTITDSAHFN 157
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV--QK 193
P + +D LT + D + + T +I+
Sbjct: 158 TPKTTIDAGDGDDKVIILASDESLTGAIDGGNGIDVLSGLNNLTAFTIQNFEILETGGIH 217
Query: 194 IYGAPKGSLGNN--IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI--------------- 236
+ G+ + IY S + D DL D
Sbjct: 218 LAGSAAQFESFDKIIYGDNPIYDSSVISLILADGVHVDLSDELAARRTSITGTAFGIDVT 277
Query: 237 ---------GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
G N I ++ G N + + V G +GNDV+ G + N+
Sbjct: 278 TGAGNDNFVGTAGNDIFDGGAGNDTLHGNAGNDLLTGGEGNDQVYGGAGNDVIRGGTGND 337
Query: 288 VF--------------FESSGNDVF--------------DGSSGLDTFFYYAPSY----L 315
GND DG + DT Y +
Sbjct: 338 TIGDGDFFGPPEVFDIDGGDGNDTVNLQIAYSIENSGIVDGGADTDTLQAYNLTGLTIKN 397
Query: 316 YKIYRFENAIIVYDANEHK-------------------------------QDFLSDVERL 344
++I + A + + + + +
Sbjct: 398 FEILETGGMETIGSAAQFESFEKIVVYDDPNYDSYAISLKLTDGVHVDLAGELATRSAHI 457
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
ID LE T + G DV + G D D Y
Sbjct: 458 SGNAFGIDVTTGGGNDQLEGTDGNDIFDGGAGNDVIDGYSGNDVLRGGAGDDTITDGDDY 517
Query: 405 -LGSYDDLRNVFGSDRGAAARHY------ITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
D+ G+D R +G + A+ + +++
Sbjct: 518 ADAKIFDIDAGNGNDTVTVFRGSDVEASGTLNGGADTDTLQAYNLSGLTIQNFEILELGG 577
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY-------DDLRNVFGSDRGAAARHY 510
+ F E + + S S R+ + S
Sbjct: 578 AGAIGSAAQFESFDKIVVYEPGYESIISLTLTDSAHVDLSDELATRSAYISGTAFGIDVA 637
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
G + D + A ++ + + G D G
Sbjct: 638 TGGGSDQLEGTDGNDIFDGGAGNDRIDGYGGNDMLFGGTGIDTAVFSG 685
Score = 40.2 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 13/117 (11%), Positives = 29/117 (24%), Gaps = 4/117 (3%)
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ L +A I ++ + + + + + L +
Sbjct: 44 FGTINLADELDSVSAEITGSSSANAITTGRGNDTISGGNGNDTLNGGEGNDTLNGDDGAD 103
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
L G+D +G D D + G+D + H+
Sbjct: 104 TLNGGAGEDTIRGGAGNDTLNGGDGNDTL----DGGQGNDKINGGAGNDTITDSAHF 156
>gi|115667815|ref|XP_001176253.1| PREDICTED: similar to hatching enzyme [Strongylocentrotus
purpuratus]
gi|115700134|ref|XP_783671.2| PREDICTED: similar to hatching enzyme [Strongylocentrotus
purpuratus]
Length = 598
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 58/179 (32%), Gaps = 40/179 (22%)
Query: 34 VLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFISSNNGYVCT 91
+ L+ D+ + + R A W V LTF E S DI+ + +
Sbjct: 187 TYSFGTLTNDLNQ--NAIKNEIRRAFQVWDDVSGLTFREVVDSSSVDIRIKFGSYEHGDG 244
Query: 92 PRYDSRYF----------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+D + + +FD ++ W G GT L A HE GH+LGL H
Sbjct: 245 ISFDGQGGVLAHAFLPRNGDAHFDDSETWTIGTNFGTNLFQVAAHEFGHSLGLYHS---- 300
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
D + Y+ + + DI + +YG G
Sbjct: 301 --------------DVQAALMYPYYRGYNPNFNLDR--------DDIAGITSLYGRNTG 337
>gi|170729544|ref|YP_001774977.1| hemolysin-type calcium binding protein [Xylella fastidiosa M12]
gi|167964337|gb|ACA11347.1| hemolysin-type calcium binding protein [Xylella fastidiosa M12]
Length = 1814
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 16/154 (10%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ S ++ G +LL GG + + ++ G + N + +++
Sbjct: 922 NAEGSDAADLLFGDAGANLL----RGGGGDDVLSGGAGNDTLYGGDGNDALYGDAGNDTL 977
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---------FYYAPSYLYKIYRFE 322
G GND+++G + +++ S G++ +G +G D S +
Sbjct: 978 YGGVGNDLLLGGAGDDLLDGSEGSNRLEGGAGNDVLKVAYWSTDNVLNGGSGDDLLDGSA 1037
Query: 323 NAIIVYDANEHKQDFLS---DVERLRFADQCIDS 353
D L + L F + S
Sbjct: 1038 YGDTYLFNKGDGHDTLIERDGTDTLVFGAGIVAS 1071
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/422 (11%), Positives = 116/422 (27%), Gaps = 53/422 (12%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ + + + G G + + + H + +
Sbjct: 1320 GGAGNDVLKVASNSSDNVFSGGTGDDMLYGSAHSDTYLFNQGDGHDTIIEPGGSFDRLVF 1379
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
V QD ++D G+ + + D + Y + I + +
Sbjct: 1380 GEGITADDVRVVRQGQDVVLDLGNGH-DSIRMKDWLTSDGEY--NRTGNIEEILFADGTR 1436
Query: 214 KDSPFI----QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T + + G+D L S + G + ++ +
Sbjct: 1437 WTGDTLGWREMTTFGTSGNDTLQ-------------GWGSSDILLGGNGDDVLSGDYGDD 1483
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------FYYAPSYLYKIY 319
++ G +G+D+++G++ N+V G++ +G +G D + + +Y
Sbjct: 1484 TLYGEAGDDLLLGDNGNDVLDGGEGHNRLEGGAGKDVLKVSTDGSSDNVFSGGTGDDMLY 1543
Query: 320 RFENAIIVYDANEHKQDFLS---DVERLRFADQ----CIDSVNVKQRSILEYTASYE--- 369
++ +D + +++ F ++ I + Q +L+ Y+
Sbjct: 1544 GSVHSDTYLFNWGDGRDTIVEQGGFDKIVFGEEIAVSDIHVLREGQDVVLDLYNGYDSIR 1603
Query: 370 --DLIQVIGQDVFESMKHFYEF-----GLSEGRDITFDSYLYLGSYDDLRN------VFG 416
D + G + F E L D L + G
Sbjct: 1604 LKDWLTSDGTRNSNADIEQIVFADGTVWSGETLSSIGLKTLGSADNDTLNGWNGRNILVG 1663
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
D + + + Y +S+ D+ + +
Sbjct: 1664 EDGDDVLKVSMFDSSDNVLVGCRGNDMLYGSSNSDIYFFDQGDGHDTIIEQGGADTLEFG 1723
Query: 477 EG 478
EG
Sbjct: 1724 EG 1725
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 84/686 (12%), Positives = 150/686 (21%), Gaps = 177/686 (25%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDI------TELNPNAQEVARWAL-----GEWSKVVDL 68
DQ W + ++ DV+ + S D L+ Q V R A +
Sbjct: 858 DQTWQHNKVQALQDVMDLYHYSSDALAPSGWNPLDALRQMVDRTAATPDGRQALADAGIP 917
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ SD + + R + D G G + +
Sbjct: 918 QIAGNAEGSDAADLLFGDAGANLLRGGGGDDVLSGGAGNDTLYGGDGNDALYGDAGNDTL 977
Query: 129 GHALG---LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+G L+ + G + ++Y+ + + S
Sbjct: 978 YGGVGNDLLLGGAGDDLLDGSEGSNRLEGGAGNDVLKVAYWSTDNVLNGGSG-------- 1029
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
D++ GS + Y T+ + G D L L
Sbjct: 1030 DDLL---------DGSAYGDTYLFN----KGDGHDTLIERDGTDTLVFGAGIVASQVRRL 1076
Query: 246 NTESWSSIGGYEKNMTIA-------QHTVIESV-------------------------VG 273
+ + +I T +S +G
Sbjct: 1077 HEGQDVVLDLGNGQDSIRLKDWLTCYGTRNDSADIEQIVFADGTLWTPETLSSMGLTTLG 1136
Query: 274 SSGNDVVIGNSA--------------------------------------NNVFFESSGN 295
+SGND + G +NV SG+
Sbjct: 1137 TSGNDTLKGWQGKDILLGGDGDDILDGGDGSNRLEGGAGNDVLKVSYWSADNVLNGGSGD 1196
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN--------------------EHKQ 335
D GS DT+ + I + + +
Sbjct: 1197 DTLYGSGHADTYLFNKGDGHDTIVEHYGSEKIVFGAGIVADNVRLLREGQDVVLDLGNGH 1256
Query: 336 DF---------------LSDVERLRFADQCIDSVNVKQR--------------------S 360
D ++E++ FAD + + +
Sbjct: 1257 DSIRFKDCFHANHNRNIFVNIEQMVFADGTVWTGETLSTLGFSTLGGDGDDVLDGGEGSN 1316
Query: 361 ILEYTASYEDL-----------IQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGS 407
LE A + L G D+ H F +G D +
Sbjct: 1317 RLEGGAGNDVLKVASNSSDNVFSGGTGDDMLYGSAHSDTYLFNQGDGHDTIIEPGGSFDR 1376
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
+D R + G D+ + +++ S + L G
Sbjct: 1377 -LVFGEGITADDVRVVRQGQDVVLDLGNGHDSIRMKDWLTSDGEYNRTGNIEEILFADGT 1435
Query: 468 -DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
G E L + + G + +G
Sbjct: 1436 RWTGDTLGWREMTTFGTSGNDTLQGWGSSDILLGGNGDDVLS--GDYGDDTLYGEAGDDL 1493
Query: 527 LEYIASHEDLINAFADAPDLVQAGKD 552
L ++ L AGKD
Sbjct: 1494 LLGDNGNDVLDGGEGHNRLEGGAGKD 1519
Score = 41.7 bits (96), Expect = 0.41, Method: Composition-based stats.
Identities = 47/332 (14%), Positives = 95/332 (28%), Gaps = 52/332 (15%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI---- 128
T+ + G + + D G +L N +
Sbjct: 1448 TTFGTSGNDTLQGWGSSDILLGGNGDDVLSGDYGDDTLYGEAGDDLLLGDNGNDVLDGGE 1507
Query: 129 GHA----------LGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
GH L + GS N G D Y + T + ++ +D++++
Sbjct: 1508 GHNRLEGGAGKDVLKVSTDGSSDNVFSGGTGDDMLYGSVHSDTYLFNWGDGRDTIVEQGG 1567
Query: 178 GYCATPM----VSDIVAVQK-------IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
VSDI +++ +Y + + + + I+ I +
Sbjct: 1568 FDKIVFGEEIAVSDIHVLREGQDVVLDLYNGYDSIRLKDWLTSDGTRNSNADIEQIVFAD 1627
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS---SGNDVVIGN 283
G TL L + ++ G+ + + + S S ++V++G
Sbjct: 1628 GTVWSGETLSSIGLKT--LGSADNDTLNGWNGRNILVGEDGDDVLKVSMFDSSDNVLVGC 1685
Query: 284 SANNVFFE-----------SSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAIIVYDA 330
N++ + G+D G DT + R + + +
Sbjct: 1686 RGNDMLYGSSNSDIYFFDQGDGHDTIIEQGGADTLEFGEGLHREEACFTRSGDDLSILFN 1745
Query: 331 NEHKQDFLSD--------VERLRFADQCIDSV 354
Q ++ VE L F D + S
Sbjct: 1746 GSEDQVTVAGWFSAAAHQVESLVFQDGTVLSG 1777
>gi|197106116|ref|YP_002131493.1| hypothetical protein PHZ_c2655 [Phenylobacterium zucineum HLK1]
gi|196479536|gb|ACG79064.1| hypothetical protein PHZ_c2655 [Phenylobacterium zucineum HLK1]
Length = 449
Score = 67.1 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 60/216 (27%), Gaps = 18/216 (8%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ + S G D + GG + + E ++ G + + + +
Sbjct: 198 SVSGGAGNEELVGSVGPDQV----AGGGGSDTLIGYEGHDTLTGEGGSDIVTGGGGDDQL 253
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDG-SSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G G+D + N +N G+D D + G D + + V
Sbjct: 254 FGGDGDDFLQDNRGSNFIRGGDGHDRIDASNFGSDFNDLHGNWGNDTVLGGRGGDWVVGG 313
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ L+ D + L+ A + + G DV
Sbjct: 314 QGND--------ELKGGDGADAVLGNLGHDDLDGGAGNDVVRGGQGDDVVRGGDGDDYLA 365
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
G D Y G+ DL + F R +
Sbjct: 366 GDRGNDTL-----YGGAGADLFHTFAGAGIDRIRDF 396
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 60/184 (32%), Gaps = 22/184 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-----------------SWS 251
+ +D+ I G D +D + G N + N
Sbjct: 258 GDDFLQDNRGSNFIRGGDGHDRIDASNFGSDFNDLHGNWGNDTVLGGRGGDWVVGGQGND 317
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + + + + + G +GNDVV G ++V G+D G G DT + A
Sbjct: 318 ELKGGDGADAVLGNLGHDDLDGGAGNDVVRGGQGDDVVRGGDGDDYLAGDRGNDTLYGGA 377
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ L+ + + D N + D L+ A I+E + +
Sbjct: 378 GADLFHTFAGAGIDRIRDFNAAEGDRLN-----VLAGTTYTLRQQDADVIVEMGDGDQVI 432
Query: 372 IQVI 375
+ +
Sbjct: 433 VTGV 436
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 43/310 (13%), Positives = 77/310 (24%), Gaps = 24/310 (7%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD---------GSSGLDTFFYYAP 312
+ +++VG GND + G + G+D D G G DT
Sbjct: 4 LNGGVGADTLVGGDGNDTLFGMGGADRLVGGGGDDRLDAGSGQATLLGGDGRDTI--QGQ 61
Query: 313 SYLYKIYRFENAII----------VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
Y I I V L+ R +
Sbjct: 62 RGDYIIDAGPGNDIVELGLWPAAAVTLGPGADTLSLNIDPEWRGVTVSDFQTGDGGDRVH 121
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
S V + G + +D F + +
Sbjct: 122 VALPSDPTWDGVT-NPFARGRLQLIQDGA--DVLLRYDGTGGAAFGVIDVARFQNLQVGQ 178
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
G +P ++ A +E+L+ + G D + +
Sbjct: 179 FTAANMSGWPPDGSPPPGVSVSGGAGNEELVGSVGPDQVAGGGGSDTLIGYEGHDTLTGE 238
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
S + G D + G + ++ ++ G D A + + DL + +
Sbjct: 239 GGSDIVTGGGGDDQLFGGDGDDFLQDNRGSNFIRGGDGHDRIDASNFGSDFNDLHGNWGN 298
Query: 543 APDLVQAGKD 552
L G D
Sbjct: 299 DTVLGGRGGD 308
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 29/215 (13%), Positives = 52/215 (24%), Gaps = 25/215 (11%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S+ G N + + V G G+D +IG ++ G+D+ G G D F
Sbjct: 198 SVSGGAGNEELVGSVGPDQVAGGGGSDTLIGYEGHDTLTGEGGSDIVTGGGGDDQLF--G 255
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + + H + + + + DL
Sbjct: 256 GDGDDFLQDNRGSNFIRGGDGHDRI-----------------------DASNFGSDFNDL 292
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D + +G D +L + G
Sbjct: 293 HGNWGNDTVLGGRGGDWVVGGQGNDELKGGDGADAVLGNLGHDDLDGGAGNDVVRGGQGD 352
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
R D L ++ L G
Sbjct: 353 DVVRGGDGDDYLAGDRGNDTLYGGAGADLFHTFAG 387
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 62/455 (13%), Positives = 127/455 (27%), Gaps = 60/455 (13%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
T+ G+D L + G + + + +++G
Sbjct: 5 NGGVGADTLVGGDGNDTL-------------FGMGGADRLVGGGGDDRLDAGSGQATLLG 51
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSS----------GLDTFFYY-------APSYLY 316
G D + G + + GND+ + G DT +
Sbjct: 52 GDGRDTIQGQRGDYIIDAGPGNDIVELGLWPAAAVTLGPGADTLSLNIDPEWRGVTVSDF 111
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + + V ++ D +++ FA + + +L Y + VI
Sbjct: 112 QTGDGGDRVHVALPSDPTWDGVTN----PFARGRLQLIQDGADVLLRYDGTGGAAFGVID 167
Query: 377 QDVFESMK------HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
F++++ +G S ++L G D+ A T
Sbjct: 168 VARFQNLQVGQFTAANMSGWPPDGSPPPGVSVSGGAGNEELVGSVGPDQVAGGGGSDTLI 227
Query: 431 VKEGRN---PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
EG + + + +D + L +F G R D+
Sbjct: 228 GYEGHDTLTGEGGSDIVTGGGGDDQLFGGDGDDFLQDNRGSNFIRGGDGHDR---IDASN 284
Query: 488 YLGSYDDLRNVFGSDRGAAAR----HYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
+ ++DL +G+D R G E + D A+ H+DL +
Sbjct: 285 FGSDFNDLHGNWGNDTVLGGRGGDWVVGGQGNDELKGGDGADAVLGNLGHDDLDGGAGND 344
Query: 544 PDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
G D + D YL ++G + + G+ R
Sbjct: 345 VVRGGQGDDVVRGG----------DGDDYLAGDRGNDTLYGGAGADLFHTFAGAGIDRIR 394
Query: 604 ALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVD 638
+ +V+ + + + D + + D
Sbjct: 395 DFNAAEGDRLNVLAGTTYTLRQQDADVIVEMGDGD 429
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 68/262 (25%), Gaps = 34/262 (12%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + D G G T++ + + G + G D
Sbjct: 200 SGGAGNEELVGSVGPDQVAGGGGSDTLIGYEGHDTLTGE------GGSDIVTGGGGDDQL 253
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ D + D A+ SD + +G
Sbjct: 254 FGGDGDDFLQDNRGSNFIRGGDGHDRIDASNFGSDFNDLHGNWG-------------NDT 300
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ G+D L GG L + G N + + V
Sbjct: 301 VLGGRGGDWVVGGQGNDELK----GGDGADAVLGNLGHDDLDGGAGNDVVRGGQGDDVVR 356
Query: 273 GSSGNDVVIGNSANNVFFESSGN-----------DVFDGSSGLDTFFYYAPSYLYKIYRF 321
G G+D + G+ N+ + +G D + + + R
Sbjct: 357 GGDGDDYLAGDRGNDTLYGGAGADLFHTFAGAGIDRIRDFNAAEGDRLNVLAGTTYTLRQ 416
Query: 322 ENAIIVYDANEHKQDFLSDVER 343
++A ++ + + Q ++ VE
Sbjct: 417 QDADVIVEMGDGDQVIVTGVEL 438
>gi|149912602|ref|ZP_01901136.1| RTX toxins and related Ca2+-binding proteins-like protein
[Roseobacter sp. AzwK-3b]
gi|149813008|gb|EDM72834.1| RTX toxins and related Ca2+-binding proteins-like protein
[Roseobacter sp. AzwK-3b]
Length = 616
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 57/164 (34%), Gaps = 5/164 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + I+ G D + +GG + + + + G N +A
Sbjct: 334 STDDDLSGTDAHDLIHAGDGADTV----LGGAGDDLLIGAAGDDILTGGSGNDRLAGEQG 389
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G G+D++ G + +++ ++ +G D+ G +G DT A ++ +
Sbjct: 390 NDTLDGGMGDDILTGGAGDDILWDGTGADLLFGDAGNDTIHLAADDAADTVHGGDGIDT- 448
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
D + Q D+ + + + A E
Sbjct: 449 LDLSTTGQQAHIDIAAGTITRPGVPQDSFTGIEVFAAGAGKEVF 492
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 47/143 (32%), Gaps = 5/143 (3%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G D I + + G + + I ++V+G +G+D++IG +
Sbjct: 312 AGTDADCFEDPMQAARDITFGLSTDDDLSGTDAHDLIHAGDGADTVLGGAGDDLLIGAAG 371
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK---QDFLSDVE 342
+++ SGND G G DT + I++D D +D
Sbjct: 372 DDILTGGSGNDRLAGEQGNDTL--DGGMGDDILTGGAGDDILWDGTGADLLFGDAGNDTI 429
Query: 343 RLRFADQCIDSVNVKQRSILEYT 365
L D L+ +
Sbjct: 430 HLAADDAADTVHGGDGIDTLDLS 452
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 33/263 (12%), Positives = 56/263 (21%), Gaps = 23/263 (8%)
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
LS + L D + A + LI G D+ +G D
Sbjct: 333 LSTDDDLSGTDAHDLIHAGDGADTVLGGAGDDLLIGAAGDDILTGGSGNDRLAGEQGNDT 392
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
G DD+ D + G + A
Sbjct: 393 L-----DGGMGDDILTGGAGDDIL----WDGTGADLLFGDAGNDTIHLAADDAADTVHGG 443
Query: 458 DA----PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
D + H R ++ + +
Sbjct: 444 DGIDTLDLSTTGQQAHIDIAAGTITRPGVPQDSFTGI---EVFAAGAGKEVFDLSGFFSP 500
Query: 514 GVKEGR----NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
G F + + +D+ A V +D + E R F+P
Sbjct: 501 GAGAIPRTTFQITDFDYDDTLVLTDDIHLAL-SDLHAVTDTRDIRKDSSDFEARISVFDP 559
Query: 570 DLYLTSYDDLWNVFGSDRSAAAQ 592
+ ++ F D A
Sbjct: 560 ETVAETHG--RPGFRQDDEDALM 580
>gi|257485400|ref|ZP_05639441.1| serralysin [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 129
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 14/93 (15%)
Query: 3 NIKPVYTTERIADHLLRDQY------------WSNYFIRYKPDVLTTHRLSFDITELNPN 50
N KP Y+ ++ AD++LRD + F+ KP +F + N
Sbjct: 39 NGKPSYSVDQAADYILRDNAAWTDRDGNGTINLTYTFLTAKPAGFDNSLGTF--SAFNAQ 96
Query: 51 AQEVARWALGEWSKVVDLTFEETSIHSDIKFIS 83
+ A ++ W+ V ++F + + D
Sbjct: 97 QKAQAVLSMQSWADVAKVSFTQAASGGDGHMTF 129
>gi|242278269|ref|YP_002990398.1| hemolysin-type calcium-binding region [Desulfovibrio salexigens DSM
2638]
gi|242121163|gb|ACS78859.1| Hemolysin-type calcium-binding region [Desulfovibrio salexigens DSM
2638]
Length = 818
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 62/435 (14%), Positives = 112/435 (25%), Gaps = 44/435 (10%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G + I +++ G GND++ GN +++ SG D DG G D F Y
Sbjct: 376 DYYDGRGGDDYIDGKEGNDTLKGGDGNDIIYGNIGDDLIEGGSGADTLDGGDGQDIFRYS 435
Query: 311 APSYLYK--IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
L + F +A D + + + D +V + + + A
Sbjct: 436 EAEGLSGEELQSFSSADDTLDFSGENFSETAIFAAIEANDYTGTNVTMGTTPVFVFDAGG 495
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ G D + H +S G + G+ + + + + T
Sbjct: 496 KLWYDSNGVD---AGGHTLITKVS-GDAVVASDLTVDGAAIEEAVQWETGAESGETWVGT 551
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL- 487
++ + L D G D G + + ++
Sbjct: 552 SKTDYYNGAGGDDSISGKQGVDTLFGGLGDDIIDGGNGADSIDGGGGNDTIYGGQNADYI 611
Query: 488 ---------YLGSYDDLR------NVFGSDRGAAARHYITHGVKEGRN------------ 520
Y G D + + G+A + + G G +
Sbjct: 612 DGGADNDLIYGGQNGDTMIGGEGNDTVSYEGGSAVQVNLADGTVSGGSNTDTLVSIENVI 671
Query: 521 -PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDL 579
D AL + L D D+ G ++ D
Sbjct: 672 GTDNNDALNGCDAPNSLSGGAGDDTLFGSGDADY--LSGGTGDDVFSYTSS---AEGRDT 726
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDL 639
F S + + I+ + V + FD L
Sbjct: 727 IADFVSADDS----FYFSSEFNSNYTFINVTPGEGVPYDGQTGPADGTAYFVFDSDNGQL 782
Query: 640 YTDYFGDGNYYDSDL 654
+ D G D L
Sbjct: 783 WYDPDGSAASSDHAL 797
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/384 (13%), Positives = 87/384 (22%), Gaps = 80/384 (20%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV--- 149
+ AD W + I G +G +YG
Sbjct: 352 TSGDGIDWGDATESADRWTGTVNTDYYDGRGGDDYIDGKEGNDTLKGGDGNDIIYGNIGD 411
Query: 150 ------------DNDYENDSFLTS---------VMSYFMPQDSMMDASFGYCATPMVSDI 188
D D F S + S+ D++ + + T + + I
Sbjct: 412 DLIEGGSGADTLDGGDGQDIFRYSEAEGLSGEELQSFSSADDTLDFSGENFSETAIFAAI 471
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
A + + G L + G DL +
Sbjct: 472 EANDYTG---TNVTMGTTPVFVFDAGGKLWYDSNGVDAGGHTLITKVSGDAVVASDLTVD 528
Query: 249 SW------------------------SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G + +I+ ++++ G G+D++ G +
Sbjct: 529 GAAIEEAVQWETGAESGETWVGTSKTDYYNGAGGDDSISGKQGVDTLFGGLGDDIIDGGN 588
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-------------- 330
+ GND G D + + IY +N +
Sbjct: 589 GADSIDGGGGNDTIYGGQNAD--YIDGGADNDLIYGGQNGDTMIGGEGNDTVSYEGGSAV 646
Query: 331 ----------NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D L +E + D + L A + L D
Sbjct: 647 QVNLADGTVSGGSNTDTLVSIENVIGTDNNDALNGCDAPNSLSGGAGDDTLFGSGDADYL 706
Query: 381 ESMKHFYEFGLS---EGRDITFDS 401
F + EGRD D
Sbjct: 707 SGGTGDDVFSYTSSAEGRDTIADF 730
>gi|56972358|gb|AAH88120.1| Matrix metallopeptidase 12 [Rattus norvegicus]
Length = 465
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 64/190 (33%), Gaps = 53/190 (27%)
Query: 35 LTTHRLSFDITELNPNAQEV-----ARWALGEWSKVVDLTFEET-SIHSDIKFIS----- 83
L++ I P+ + + A WS V L F + +DI +
Sbjct: 105 WMKRYLTYRIYNYTPDMKRADVDYIFQKAFQVWSDVTPLRFRKIHKGEADITILFAFGDH 164
Query: 84 ----------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 165 GDFYDFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 221
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--SDIVAV 191
L H + S+M + + T + DI ++
Sbjct: 222 LPHSNNPK-------------------SIM--------YPTYRYLHPNTFRLSADDIHSI 254
Query: 192 QKIYGAPKGS 201
Q +YGAP +
Sbjct: 255 QSLYGAPVKN 264
>gi|332208036|ref|XP_003253102.1| PREDICTED: macrophage metalloelastase [Nomascus leucogenys]
Length = 470
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/193 (21%), Positives = 65/193 (33%), Gaps = 47/193 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W ++I Y+ + T D+ R A WS V L F + +DI
Sbjct: 109 WRKHYITYRINNYTPDMNREDVD-------NTIRKAFQVWSNVTPLKFSKIKTGVADILV 161
Query: 82 ISSNNGYVCTPRY-------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + + + S + +FD + W +GT L A+HEI
Sbjct: 162 VFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDDDEFWTTH-SEGTNLFLTAVHEI 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H P + Y+ T +S DI
Sbjct: 221 GHSLGLGHS-----SDPKAIMFPTYKYVDINTFRLS--------------------ADDI 255
Query: 189 VAVQKIYGAPKGS 201
+Q +YG PK +
Sbjct: 256 RGIQSLYGYPKEN 268
>gi|296480355|gb|DAA22470.1| interstitial collagenase precursor [Bos taurus]
Length = 469
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 54/185 (29%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W N + Y+ + T D+ + A WS V LTF + S +DI
Sbjct: 108 RWENTNLTYRIENYTPDLSRADVD-------QAIEKAFQLWSNVTPLTFTKVSEGQADIM 160
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + + +FD + W + L A
Sbjct: 161 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GAGIGGDAHFDDDEWWTSNF-QDYNLYRVAA 217
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE GH+LGL H + D D Y Q+ T
Sbjct: 218 HEFGHSLGLAHSTDIGALMYPSYTFSGDVQLSQDDIDGIQAIYGPSQNPTQPVG---PQT 274
Query: 183 PMVSD 187
P V D
Sbjct: 275 PEVCD 279
>gi|257791800|ref|YP_003182406.1| cell wall hydrolase/autolysin [Eggerthella lenta DSM 2243]
gi|257475697|gb|ACV56017.1| cell wall hydrolase/autolysin [Eggerthella lenta DSM 2243]
Length = 1805
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 23/165 (13%)
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
D+ YL S + R + +D A AR + + F Y+ + D+ + +
Sbjct: 448 DATYYL-SDEGCRRLGQADADAIARQFPQSAWVDYSAVYDFN--YYLEYNSDVRDHYGSD 504
Query: 544 PDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKE 601
G HF +G EGR +F+ D Y +YDDL +VFG+D HY+ +G +E
Sbjct: 505 DPEGALG--HFLTYGMGEGRKAIASFDVDFYRQNYDDLRSVFGNDLRKYYLHYVEYGQQE 562
Query: 602 GR----------------ALGISGMQFKSVMNLSEKSRDKADLSL 630
GR + S + V +LS AD ++
Sbjct: 563 GRVADRLLDDEPAPPVSLSATPSADRSTVVASLSGGLAASADSAV 607
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
+ A Y ++ D+++A + +HF +FG EGR + TF+ Y TSY DL +
Sbjct: 1724 YDAAYYGKNNPDVVDACG--EGNSEGIFEHFIHFGMAEGRRANETFDVFRYRTSYADLRS 1781
Query: 582 VFGSDRSAAAQHYITHGMKEGRAL 605
FG D A +HYI +G EGR+
Sbjct: 1782 AFGDDLKAYYEHYIEYGQFEGRSA 1805
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG-SDRGAAARHYITHGVKE 517
+++ + G +D+ Y + D+ + G + H+I G+ E
Sbjct: 1700 DDEILDESFTGSVSASTGLGYGAVYDAAYYGKNNPDVVDACGEGNSEGIFEHFIHFGMAE 1759
Query: 518 GRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
GR + F Y S+ DL +AF D +A +H+ +G EGRS
Sbjct: 1760 GRRANETFDVFRYRTSYADLRSAFGDDL---KAYYEHYIEYGQFEGRS 1804
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--TFDSYLYLGSYDD 494
+ A Y ++ D+++A + + +HF +FG EGR TFD + Y SY D
Sbjct: 1721 GAVYDAAYYGKNNPDVVDACGEG--NSEGIFEHFIHFGMAEGRRANETFDVFRYRTSYAD 1778
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRN 520
LR+ FG D A HYI +G EGR+
Sbjct: 1779 LRSAFGDDLKAYYEHYIEYGQFEGRS 1804
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+D A AR + + F Y+ + D+ + + + HF +G
Sbjct: 464 ADADAIARQFPQSAWVDYSAVYDFN--YYLEYNSDVRDHYGSDD--PEGALGHFLTYGMG 519
Query: 477 EGR--FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
EGR +FD Y +YDDLR+VFG+D HY+ +G +EGR D
Sbjct: 520 EGRKAIASFDVDFYRQNYDDLRSVFGNDLRKYYLHYVEYGQQEGRVAD 567
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM-KHFYEFGLSEGR--DITFDSYLYL 405
Y + D++ G+ E + +HF FG++EGR + TFD + Y
Sbjct: 1714 ASTGLGYGAVYDAAYYGKNNPDVVDACGEGNSEGIFEHFIHFGMAEGRRANETFDVFRYR 1773
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
SY DLR+ FG D A HYI +G EGR+
Sbjct: 1774 TSYADLRSAFGDDLKAYYEHYIEYGQFEGRS 1804
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 357 KQRSILEYTASYEDLIQVIG-QDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
Y D+ G D ++ HF +G+ EGR FD Y +YDDLR+
Sbjct: 483 AVYDFNYYLEYNSDVRDHYGSDDPEGALGHFLTYGMGEGRKAIASFDVDFYRQNYDDLRS 542
Query: 414 VFGSDRGAAARHYITHGVKEGR 435
VFG+D HY+ +G +EGR
Sbjct: 543 VFGNDLRKYYLHYVEYGQQEGR 564
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 46/127 (36%), Gaps = 7/127 (5%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
++ + S I D ES G +D+ Y + D+ + G
Sbjct: 1684 NVDNMFSWITSRSAWIDDEILD--ESFTGSVSASTGLGYGAVYDAAYYGKNNPDVVDACG 1741
Query: 417 -SDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
+ H+I G+ EGR + F Y S+ DL +AF D +H+ +G
Sbjct: 1742 EGNSEGIFEHFIHFGMAEGRRANETFDVFRYRTSYADLRSAFGDDLKAY---YEHYIEYG 1798
Query: 475 CEEGRFV 481
EGR
Sbjct: 1799 QFEGRSA 1805
Score = 37.5 bits (85), Expect = 8.2, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ Y +N V DA + F N + Y SY DL
Sbjct: 1721 GAVYDAAYYGKNNPDVVDACGEGNSEGIFEHFIHFGMAEGRRANETF-DVFRYRTSYADL 1779
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRD 396
G D+ +H+ E+G EGR
Sbjct: 1780 RSAFGDDLKAYYEHYIEYGQFEGRS 1804
>gi|165976753|ref|YP_001652346.1| RTX-III toxin determinant A from serotype 8 [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|165876854|gb|ABY69902.1| RTX-III toxin determinant A from serotype 8 [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
Length = 1052
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 11/130 (8%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G+D++ GN +++ + GND G +G D + K+ + +
Sbjct: 754 GADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLY--GGEGNDKLLGGNGNNYLSGGDG 811
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH--FYEFG 390
+ E + K L ++ + L G D E FY +
Sbjct: 812 -------NDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYR 864
Query: 391 LSEGRDITFD 400
+ G +D
Sbjct: 865 STSGNHTIYD 874
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 6/120 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + +Y G+D L GG N L + + G + N +
Sbjct: 757 GDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGNDKLLGGNGNNYLSGGDGNDELQ 816
Query: 264 Q-HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G G+D + G+S +++ GND +G G D + Y + S + IY
Sbjct: 817 VLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYRSTSGNHTIYDQG 876
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 48/154 (31%), Gaps = 8/154 (5%)
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D L VE + ++Q + K R I + L G D+ K E G
Sbjct: 725 HDELHSVEEIIGSNQRDEFKGSKFRDIFHGADGDDLLNGNDGDDILYGDKGNDELRGDNG 784
Query: 395 RDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
D + + L G+ ++ + + + ++ G+ Y +S
Sbjct: 785 NDQLYGGEGNDKLLGGNGNNYLSGGDGNDELQVLGNGFNVLRGGKG----DDKLYGSSGS 840
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
DL++ L F + G +D
Sbjct: 841 DLLDGGEGNDYLEGGDGSDFYVYRSTSGNHTIYD 874
Score = 39.0 bits (89), Expect = 2.6, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 65/241 (26%), Gaps = 37/241 (15%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIVYDANEHKQ 335
+ N+ F ++G+ G D +Y + V
Sbjct: 627 HLGNGNDKVFLAAGSAEIHAGEGHDVVYYDKTDTGLLVIDGTKATEQGRYSVTRELSGAT 686
Query: 336 DFLSDV------------ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
L +V E L + D + + S E++I +D F+
Sbjct: 687 KILREVIKNQKSAVGKREETLEYRDYELTQSGNSNLKAHDELHSVEEIIGSNQRDEFKGS 746
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
K F ++G DDL N D Y G E R + L
Sbjct: 747 KFRDIFHGADG--------------DDLLNGNDGDDIL----YGDKGNDELRGDNGNDQL 788
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHF--SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
++ L+ + G D G R D LY S DL +
Sbjct: 789 YGGEGNDKLLGGNGNNYLSGGDGNDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEG 848
Query: 502 D 502
+
Sbjct: 849 N 849
>gi|229588904|ref|YP_002871023.1| putative hemolysin-like protein [Pseudomonas fluorescens SBW25]
gi|229360770|emb|CAY47628.1| putative hemolysin-like protein [Pseudomonas fluorescens SBW25]
Length = 512
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 69/232 (29%), Gaps = 15/232 (6%)
Query: 192 QKIYGAPKGSLGNNIYKIEV-QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
Q YG + + +Y ++ + GG+D + + I+
Sbjct: 98 QTHYGQLNIRVNDQLYHFASHDKEGQALKFHLKTHGGNDNVSIDANVMQPITIETGDG-D 156
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ + + V SG GN +++ G++V G++G D +
Sbjct: 157 DWVRAGGGYTRVFGGNGNDVVRLGSGMGYAEGNDGDDIIMGGPGDNVVYGNNGNDRLYAG 216
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILE---- 363
A K Y + L + +RL DQ + +++
Sbjct: 217 AGPRHKKSYMDGGNGNDQLYAGNGHTVLQGGTGNDRLIGHDQTTFYTGIGADTVIANRPG 276
Query: 364 ---YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
Y + + + + G + H G G I + DDL
Sbjct: 277 DAIYAKASDTIKHLNGSVLTAVSAH---DGPILGVVINGSADFIQRVEDDLA 325
>gi|303250586|ref|ZP_07336783.1| RTX-III toxin determinant A from serotype 8 [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|1710801|sp|P55131|RTX32_ACTPL RecName: Full=RTX-III toxin determinant A from serotype 8; AltName:
Full=APX-IIIA; AltName: Full=Cytolysin IIIA;
Short=CLY-IIIA
gi|38958|emb|CAA48711.1| apxIIIA [Actinobacillus pleuropneumoniae]
gi|558152|emb|CAA56358.1| xIIIA [Actinobacillus pleuropneumoniae serovar 8 str. 405]
gi|302650574|gb|EFL80733.1| RTX-III toxin determinant A from serotype 8 [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 1052
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 11/130 (8%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G+D++ GN +++ + GND G +G D + K+ + +
Sbjct: 754 GADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLY--GGEGNDKLLGGNGNNYLSGGDG 811
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH--FYEFG 390
+ E + K L ++ + L G D E FY +
Sbjct: 812 -------NDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYR 864
Query: 391 LSEGRDITFD 400
+ G +D
Sbjct: 865 STSGNHTIYD 874
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 6/120 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + +Y G+D L GG N L + + G + N +
Sbjct: 757 GDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGNDKLLGGNGNNYLSGGDGNDELQ 816
Query: 264 Q-HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G G+D + G+S +++ GND +G G D + Y + S + IY
Sbjct: 817 VLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYRSTSGNHTIYDQG 876
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 48/154 (31%), Gaps = 8/154 (5%)
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D L VE + ++Q + K R I + L G D+ K E G
Sbjct: 725 HDELHSVEEIIGSNQRDEFKGSKFRDIFHGADGDDLLNGNDGDDILYGDKGNDELRGDNG 784
Query: 395 RDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
D + + L G+ ++ + + + ++ G+ Y +S
Sbjct: 785 NDQLYGGEGNDKLLGGNGNNYLSGGDGNDELQVLGNGFNVLRGGKG----DDKLYGSSGS 840
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
DL++ L F + G +D
Sbjct: 841 DLLDGGEGNDYLEGGDGSDFYVYRSTSGNHTIYD 874
Score = 39.0 bits (89), Expect = 2.6, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 65/241 (26%), Gaps = 37/241 (15%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIVYDANEHKQ 335
+ N+ F ++G+ G D +Y + V
Sbjct: 627 HLGNGNDKVFLAAGSAEIHAGEGHDVVYYDKTDTGLLVIDGTKATEQGRYSVTRELSGAT 686
Query: 336 DFLSDV------------ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
L +V E L + D + + S E++I +D F+
Sbjct: 687 KILREVIKNQKSAVGKREETLEYRDYELTQSGNSNLKAHDELHSVEEIIGSNQRDEFKGS 746
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
K F ++G DDL N D Y G E R + L
Sbjct: 747 KFRDIFHGADG--------------DDLLNGNDGDDIL----YGDKGNDELRGDNGNDQL 788
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHF--SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
++ L+ + G D G R D LY S DL +
Sbjct: 789 YGGEGNDKLLGGNGNNYLSGGDGNDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEG 848
Query: 502 D 502
+
Sbjct: 849 N 849
>gi|88807497|ref|ZP_01123009.1| cell surface protein [Synechococcus sp. WH 7805]
gi|88788711|gb|EAR19866.1| cell surface protein [Synechococcus sp. WH 7805]
Length = 594
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 5/135 (3%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G + ++ +IG +AN+ F G+D DG G DT + + +
Sbjct: 377 DGLIGDNFDNALIGGAANDFVFGKLGDDFIDGGEGNDTAQFTEAKNRVDLRNAALQVT-- 434
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D L +E + + +IL + L + G DV +
Sbjct: 435 ---GDGVDQLISIENVNGGAGNDKIKGNRFANILNGEDGNDKLTGLGGGDVLSGEGGNDK 491
Query: 389 FGLSEGRDITFDSYL 403
G D F
Sbjct: 492 LFGGSGDDKLFGGNG 506
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 34/118 (28%), Gaps = 4/118 (3%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
I+ + G+D + I + + G ++ + + G SG+D
Sbjct: 444 IENVNGGAGNDKIKGNRFAN----ILNGEDGNDKLTGLGGGDVLSGEGGNDKLFGGSGDD 499
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+ G + + G D G G D F I F + D
Sbjct: 500 KLFGGNGKDKLKGDKGIDQLWGGEGRDIFEVTTGDGYDIIEDFTDRKDRIFLGVISSD 557
Score = 42.1 bits (97), Expect = 0.30, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 36/89 (40%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N + + + G GND + G S ++ F +G D G G+D +
Sbjct: 465 LNGEDGNDKLTGLGGGDVLSGEGGNDKLFGGSGDDKLFGGNGKDKLKGDKGIDQLWGGEG 524
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDV 341
++++ + I+ D + K V
Sbjct: 525 RDIFEVTTGDGYDIIEDFTDRKDRIFLGV 553
>gi|307250587|ref|ZP_07532529.1| Hemolysin, plasmid [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|307252968|ref|ZP_07534856.1| Hemolysin, plasmid [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306857403|gb|EFM89517.1| Hemolysin, plasmid [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|306859606|gb|EFM91631.1| Hemolysin, plasmid [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
Length = 1046
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 11/130 (8%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G+D++ GN +++ + GND G +G D + K+ + +
Sbjct: 748 GADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLY--GGEGNDKLLGGNGNNYLSGGDG 805
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH--FYEFG 390
+ E + K L ++ + L G D E FY +
Sbjct: 806 -------NDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYR 858
Query: 391 LSEGRDITFD 400
+ G +D
Sbjct: 859 STSGNHTIYD 868
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 6/120 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + +Y G+D L GG N L + + G + N +
Sbjct: 751 GDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGNDKLLGGNGNNYLSGGDGNDELQ 810
Query: 264 Q-HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G G+D + G+S +++ GND +G G D + Y + S + IY
Sbjct: 811 VLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYRSTSGNHTIYDQG 870
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 48/154 (31%), Gaps = 8/154 (5%)
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D L VE + ++Q + K R I + L G D+ K E G
Sbjct: 719 HDELHSVEEIIGSNQRDEFKGSKFRDIFHGADGDDLLNGNDGDDILYGDKGNDELRGDNG 778
Query: 395 RDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
D + + L G+ ++ + + + ++ G+ Y +S
Sbjct: 779 NDQLYGGEGNDKLLGGNGNNYLSGGDGNDELQVLGNGFNVLRGGKG----DDKLYGSSGS 834
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
DL++ L F + G +D
Sbjct: 835 DLLDGGEGNDYLEGGDGSDFYVYRSTSGNHTIYD 868
Score = 39.0 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 65/241 (26%), Gaps = 37/241 (15%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIVYDANEHKQ 335
+ N+ F ++G+ G D +Y + V
Sbjct: 621 HLGNGNDKVFLAAGSAEIHAGEGHDVVYYDKTDTGLLVIDGTKATEQGRYSVTRELSGAT 680
Query: 336 DFLSDV------------ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
L +V E L + D + + S E++I +D F+
Sbjct: 681 KILREVIKNQKSAVGKREETLEYRDYELTQSGNSNLKAHDELHSVEEIIGSNQRDEFKGS 740
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
K F ++G DDL N D Y G E R + L
Sbjct: 741 KFRDIFHGADG--------------DDLLNGNDGDDIL----YGDKGNDELRGDNGNDQL 782
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHF--SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
++ L+ + G D G R D LY S DL +
Sbjct: 783 YGGEGNDKLLGGNGNNYLSGGDGNDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEG 842
Query: 502 D 502
+
Sbjct: 843 N 843
>gi|168984487|emb|CAI24737.2| matrix metalloproteinase 28 (epilysin) [Mus musculus]
Length = 407
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 52/169 (30%), Gaps = 42/169 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHA 208
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD + W +G L HEIGH LGL H P P Y
Sbjct: 209 FLPRRGEAHFDGDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRD 268
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+ D++AVQ +YG P G
Sbjct: 269 ALLSWD---------------------------DVLAVQSLYGKPLGRS 290
>gi|291327537|ref|NP_446415.2| macrophage metalloelastase preproprotein [Rattus norvegicus]
gi|149020732|gb|EDL78537.1| matrix metallopeptidase 12 [Rattus norvegicus]
Length = 477
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 64/190 (33%), Gaps = 53/190 (27%)
Query: 35 LTTHRLSFDITELNPNAQEV-----ARWALGEWSKVVDLTFEET-SIHSDIKFIS----- 83
L++ I P+ + + A WS V L F + +DI +
Sbjct: 117 WMKRYLTYRIYNYTPDMKRADVDYIFQKAFQVWSDVTPLRFRKIHKGEADITILFAFGDH 176
Query: 84 ----------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 177 GDFYDFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 233
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--SDIVAV 191
L H + S+M + + T + DI ++
Sbjct: 234 LPHSNNPK-------------------SIM--------YPTYRYLHPNTFRLSADDIHSI 266
Query: 192 QKIYGAPKGS 201
Q +YGAP +
Sbjct: 267 QSLYGAPVKN 276
>gi|186680885|ref|YP_001864081.1| hemolysin-type calcium-binding region [Nostoc punctiforme PCC
73102]
gi|186463337|gb|ACC79138.1| Hemolysin-type calcium-binding region [Nostoc punctiforme PCC
73102]
Length = 976
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 49/377 (12%), Positives = 92/377 (24%), Gaps = 49/377 (12%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+G + + ++ + G +N I ++++G +GND++ G +
Sbjct: 5 TGDNSNNTFIADDDGQPWLLSGKGGDDYLAGKSQNDRIYGDEGNDNLLGGAGNDILDGGT 64
Query: 285 ANNVFFESSGNDVFDGSSGLDTF-----FYYAPSYLYK-------IYRFENAIIVYDANE 332
N+ + G D G G D + + + Y
Sbjct: 65 GNDNLYGGIGFDSLYGGDGNDIISDTDGIVDGGAGTDTLVADYSQLSNGAGIDVAYQGQN 124
Query: 333 HKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ L +++ + + + +L + G D +
Sbjct: 125 AIFSRFTGNPVLNYSNIERFEITGTQYADVLRGGTGNDIFNGGAGDDALTGGAGYDTLNG 184
Query: 392 SEGRDITFDSYLY----------LGSYDDLRNVFGSD-------------RGAAARHYIT 428
+G DI D+ + Y L N G D G +Y
Sbjct: 185 GDGNDIISDTDGIVDGGAGTDTLVADYSQLNNGAGIDVAYLGQNAIFSRFTGNPVLNYSN 244
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD-------------HFSNFGC 475
E L A ++ L D + G D +S
Sbjct: 245 IERFEITGTQYTDVLRGTAGNDILNGGAGDDVLIGSAGSDTLNGGAGTDTLVSDYSQLNN 304
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
G F+ + S + + T R L A +
Sbjct: 305 GAGVDAGFNGQNAIVSRLNNSTLLNFSNIERFELTGTQYADVLRGGTGNDILNGGAGDDA 364
Query: 536 LINAFADAPDLVQAGKD 552
L G D
Sbjct: 365 LTGGAGYDTLNGGDGND 381
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 83/579 (14%), Positives = 146/579 (25%), Gaps = 91/579 (15%)
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG- 138
+F + Y R + + D G G T+ + I G++ G
Sbjct: 335 RFELTGTQYADVLRGGTGNDILNGGAGDDALTGGAGYDTLNGGDGNDRITDTDGIVDGGA 394
Query: 139 -------SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
Y+ GV+ Y N + + S + + F T +D++
Sbjct: 395 GTDTLVADYSQFNNGAGVEVAYLNQNAIFSRFTGNPVLNYSNIERFEITGT-QYTDVLRG 453
Query: 192 QKIYGAPKGSLGNNIYKIE---VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
G G+++ I D+ G + +Y LNT
Sbjct: 454 NAGNDILNGGAGDDVLIGSAGYDTLNGGDGNDIISDTDGIVDGGAGTDTLIADYSQLNTA 513
Query: 249 SWSSIGGYEKN-------------------MTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ +G +N I +++ G++GND++ G + ++
Sbjct: 514 TPVDVGYLGQNAIFSRISGNPVLSFSNIERFEITGSQYADALRGAAGNDILNGGAGDDAL 573
Query: 290 FESSGNDVFDGSSGLDTF-----FYYAPSYLYK-------IYRFENAIIVYDANEHKQDF 337
+G D +G G D + + Y
Sbjct: 574 IGGAGYDTLNGGDGNDRITDTDGIVNGGAGTDTLVADYSQFNNGAGVEVAYQGQNAIFSR 633
Query: 338 LSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ L +++ + + + +L A + L G DV + +G D
Sbjct: 634 FTGNPVLNYSNIERFEITGTQYTDVLRGAAGNDILNGGAGDDVLIGGAGYDTLNGGDGND 693
Query: 397 ITFDSYLYLG-----------------------SYDDLRNVFGSDRGAAARHYITHGVKE 433
D + Y +F G Y E
Sbjct: 694 RITDIDGIVDGGAGTDTLVADYSQLNNGTPVDVGYQSQNAIFSRVSGNPVLSYSNIERFE 753
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
L A ++ L D + G D N G R D+ + G+
Sbjct: 754 LTGSQYADVLRGAAGNDILNGGAGDDALIGGAGYDT-LNGGDGNDRITDTDAIVDGGTGT 812
Query: 494 DLRNV---------------------FGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
D F G Y E L A
Sbjct: 813 DTLVADYSQFSNGAGVDVAYQGQNAIFSRFTGNPVLSYSNIERFEITGSQYADVLRGTAG 872
Query: 533 HEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDL 571
++ L + + AG D G FN L
Sbjct: 873 NDILNGGAGNDILVGGAGND--ILTGGIGADQFVFNSKL 909
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/401 (12%), Positives = 94/401 (23%), Gaps = 50/401 (12%)
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
Y DN + + D G + + G + +
Sbjct: 3 TYTGDNSNNTFIADDDGQPWLLSGKGGDDYLAGKSQNDRIYGDEGNDNLLGGAGNDILDG 62
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLL-DLTLIGGVKNYIDLNTESWSSIGGYEK------ 258
++Y G+D++ D I D +S +
Sbjct: 63 G-TGNDNLYGGIGFDSLYGGDGNDIISDTDGIVDGGAGTDTLVADYSQLSNGAGIDVAYQ 121
Query: 259 ---------------------NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
I + + G +GND+ G + ++ +G D
Sbjct: 122 GQNAIFSRFTGNPVLNYSNIERFEITGTQYADVLRGGTGNDIFNGGAGDDALTGGAGYDT 181
Query: 298 FDGSSGLDTF-----FYYAPSYLYKIY-------RFENAIIVYDANEHKQDFLSDVERLR 345
+G G D + + + Y + L
Sbjct: 182 LNGGDGNDIISDTDGIVDGGAGTDTLVADYSQLNNGAGIDVAYLGQNAIFSRFTGNPVLN 241
Query: 346 FAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
+++ + + + +L TA + L G DV G D Y
Sbjct: 242 YSNIERFEITGTQYTDVLRGTAGNDILNGGAGDDVLIGSAGSDTLNGGAGTDTLVSDYSQ 301
Query: 405 LGSYDDLRNVFGSDRG-------AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
L + + F + ++ E L + D++N A
Sbjct: 302 LNNGAGVDAGFNGQNAIVSRLNNSTLLNFSNIERFELTGTQYADVLRGGTGN-DILNGGA 360
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
L N G R D + G+ D
Sbjct: 361 GDDALTGGAGYDTLNGGDGNDRITDTDGIVDGGAGTDTLVA 401
>gi|268679627|ref|YP_003304058.1| hypothetical protein Sdel_0994 [Sulfurospirillum deleyianum DSM
6946]
gi|268617658|gb|ACZ12023.1| hypothetical protein Sdel_0994 [Sulfurospirillum deleyianum DSM
6946]
Length = 585
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 67/206 (32%), Gaps = 13/206 (6%)
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ Y TS S DA +G ++ IYG
Sbjct: 137 TSNAADADKSLYNYLFGNTSGWSSSDASQGNYDAIYGSNNDDILRGDSKTDAIYGGGGK- 195
Query: 202 LGNNIYKIE--VQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIG 254
++IY + I SGG+D ++ TL GG L ++
Sbjct: 196 --DDIYGGSLAEKLYGGEGDDFIDGSGGNDTIEGAEGKDTLDGGDGTDTLLGGTGDDNLF 253
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + T+ +++ G SG D ++G S N+ G D +G +G DT
Sbjct: 254 GDAGDDTLNGGEDNDTLNGGSGLDTLLGESGNDTLIGGGGADTLNGGTGSDTLL---GGD 310
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSD 340
Y Y N + D++ +
Sbjct: 311 DYDTYIAGNGDTINDSDGSGRVTFEG 336
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 39/231 (16%), Positives = 65/231 (28%), Gaps = 48/231 (20%)
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
NY+ NT WSS + N +++ GS+ +D++ G+S + + G D G
Sbjct: 149 NYLFGNTSGWSSSDASQGNY--------DAIYGSNNDDILRGDSKTDAIYGGGGKDDIYG 200
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
S + + + D + E +
Sbjct: 201 GSLAEKLY-------------GGEGDDFIDGSGGNDTIEGAE---------------GKD 232
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----FDSYLYLGSYDDLRNVF 415
L+ + L+ G D E D D+ L D L
Sbjct: 233 TLDGGDGTDTLLGGTGDDNLFGDAGDDTLNGGEDNDTLNGGSGLDTLLGESGNDTLIGGG 292
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
G+D + G YIA + D IN + + G
Sbjct: 293 GADT-------LNGGTGSDTLLGGDDYDTYIAGNGDTINDSDGSGRVTFEG 336
Score = 41.7 bits (96), Expect = 0.36, Method: Composition-based stats.
Identities = 15/178 (8%), Positives = 33/178 (18%), Gaps = 3/178 (1%)
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---VERLRFADQCIDSVNVKQRSILEY 364
+ + + + + D L + + D L
Sbjct: 150 YLFGNTSGWSSSDASQGNYDAIYGSNNDDILRGDSKTDAIYGGGGKDDIYGGSLAEKLYG 209
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ + G D E + +G D + D + +
Sbjct: 210 GEGDDFIDGSGGNDTIEGAEGKDTLDGGDGTDTLLGGTGDDNLFGDAGDDTLNGGEDNDT 269
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
G+ L + L L D + +
Sbjct: 270 LNGGSGLDTLLGESGNDTLIGGGGADTLNGGTGSDTLLGGDDYDTYIAGNGDTINDSD 327
>gi|144899715|emb|CAM76579.1| Autotransporter adhesin [Magnetospirillum gryphiswaldense MSR-1]
Length = 3627
Score = 67.1 bits (162), Expect = 9e-09, Method: Composition-based stats.
Identities = 49/336 (14%), Positives = 99/336 (29%), Gaps = 24/336 (7%)
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
P S ++ D + T+ + + S G
Sbjct: 3208 PDNGSLTDIDFTVGLLDANGQQVASDTVTMDVSDFAGLGSGDGNDTLSGGSGTDTLFGGG 3267
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
+ + +S D T D + G G++ +
Sbjct: 3268 GDDVLVYSADQVSDRNDADYQDQGGAARDGTDHTVDSNGLNDTLDTYIGGSGHDTLTMSD 3327
Query: 212 QQ-----KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ ++ I G+D++D+ NY D + ++ G N I +
Sbjct: 3328 GNDAIWIGNVQGVEVIQAGAGNDVVDM-------NYSDGTSYGDLTVDGGSGNDAIFTND 3380
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY------- 319
+ ++G SG + + GN+ N+ F SG+D G +G DT Y + +Y
Sbjct: 3381 GDDVLIGGSGTNYLSGNAGNDTFIGGSGSDAMHGGAGADTVDYSDSATGVNVYLGAGDGN 3440
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL-----IQV 374
+ + V ++ + + D S +E + + S+ + A + V
Sbjct: 3441 GYSGSGGVGNSGDAQGDTYSGIENVVGSAHDDYVYGSASGSVADLGAGNDTFDNTEVSSV 3500
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ D + G D Y +
Sbjct: 3501 VKSDTVDGGAGNDTIWTGNGDDTLIGGAGDDQLYGE 3536
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/301 (17%), Positives = 90/301 (29%), Gaps = 30/301 (9%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
T+ +D++ S + T + D G G TI +
Sbjct: 1735 VSTTDGTDVELSSDSLHVSFTGSAADGNDVLSGGTGDDTVFGGGGNDTISGGAGTDVLNG 1794
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G + G D + + V G +T D+V+
Sbjct: 1795 GAG------NDVFTMAAGEDGTWGGGTGAKDV---------------GDKSTSGTQDVVS 1833
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD--DLLDLTLIGGVKNYIDLNTE 248
V + +G V + I SGG D +++ G + +DL ++
Sbjct: 1834 VGGMNQLDDTVIGGEGVDTLVASSGNDAIFLDAASGGARLDGIEVIDAGAGNDVVDLTSD 1893
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ N+TI + + + S+G+D +IG + N+ +G+DV G G DT
Sbjct: 1894 RFDY-----GNVTIDGGSGNDVLWSSAGDDTLIGGTGNDTLNAGAGDDVLLGGDGNDTII 1948
Query: 309 YYAP-SYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTA 366
S + + Q E L F D N Q +
Sbjct: 1949 VDKDESAGDVVDGGSGTDTLRVELTAGQYTEAVRDELLEFNAFASDPANAGQSFTFDSLG 2008
Query: 367 S 367
Sbjct: 2009 G 2009
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/363 (13%), Positives = 89/363 (24%), Gaps = 8/363 (2%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ S + ++G + + +G+G+ A I
Sbjct: 2817 VNVTSGSTVTLTVVSDGPLDLSGVTASVTSTEANGGDTATTTLVGEGSNAGEAAQEGIHV 2876
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
A G + D+D + D+ + ++ P +
Sbjct: 2877 A---EDGSIVINGSNLLANDSDADGDTLTIVSVGDAEHGSVTLNPDGTISFVPDANYQGE 2933
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL-NTES 249
Y G G + + + + + + D+ D+T D + S
Sbjct: 2934 TSFTYTVSDGQGGTSTATVNLTVDSDGINENVSYTIDADIGDVTGAANTSTDYDGSGSAS 2993
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
S++ G N + ++V G +GND + G S N+ SG D G SG D
Sbjct: 2994 SSTVTGTSGNDSKYGGAGNDTVDGGAGNDKLYGGSGNDSVVGGSGTDTLFGGSGNDHLSD 3053
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ AS
Sbjct: 3054 GTEAVAGGSSGGSGGGHGSHGGSSGGSGGGHGHGSHGGSGGGHGHGHGSSGGSSGGASAN 3113
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
D G D + GS L GA+ +T+
Sbjct: 3114 TGS----NDTMFGGSGNDVISGGGGNDKLYGDGATEGSGGYLYADLDISGGASDGSSVTY 3169
Query: 430 GVK 432
+
Sbjct: 3170 TIA 3172
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/380 (12%), Positives = 89/380 (23%), Gaps = 45/380 (11%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES-----VVGSSGNDVVIGNSAN 286
D + + A I++ +G ND + G S
Sbjct: 1573 DWSGTDTFTVRTTDANGGVTEQQVTVNVAAQADGAAIDTQDASITLGDGSNDTITGTSGA 1632
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV----E 342
+ SGNDV +G +G DT + + Y + I + + + + E
Sbjct: 1633 DSLIGGSGNDVVNGGAGNDTIYGDSVGASAGSYTTDLNIDISTLDSSESLSSVTISGVPE 1692
Query: 343 RLRFADQCIDSVN--VKQRSILEYTASYEDLIQVIGQD---------------------- 378
+ + L+ + G D
Sbjct: 1693 GASLSAGTDNDDGTWTLSVEDLDGLQLTVTQVDADGFDLGVSVSTTDGTDVELSSDSLHV 1752
Query: 379 --VFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+ G D F + + G+ D+ N +
Sbjct: 1753 SFTGSAADGNDVLSGGTGDDTVFGGGGNDTISGGAGTDVLNGGAGNDVFTMAAGEDGTWG 1812
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
G + + + + D +G + G F G+
Sbjct: 1813 GGTGAKDVGDKSTSGTQDVVSVGGMNQLDDTVIGGEGVDTLVASSGNDAIFLDAASGGAR 1872
Query: 493 DDLRNVF----GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
D V G+D +G L A + LI +
Sbjct: 1873 LDGIEVIDAGAGNDVVDLTSDRFDYGNVTIDGGSGNDVLWSSAGDDTLIGGTGNDTLNAG 1932
Query: 549 AGKDHFSNFGYEEGRSITFN 568
AG D G + +I +
Sbjct: 1933 AGDD--VLLGGDGNDTIIVD 1950
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 40/353 (11%), Positives = 91/353 (25%), Gaps = 21/353 (5%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI--------G 282
LD + + ++ ++ +G + N T++ + +++ G G+DV++
Sbjct: 3223 LDANGQQVASDTVTMDVSDFAGLGSGDGNDTLSGGSGTDTLFGGGGDDVLVYSADQVSDR 3282
Query: 283 NSANNVFFESSGND----VFDGSSGLDTF-FYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N A+ + D D + DT Y S + + ++ N +
Sbjct: 3283 NDADYQDQGGAARDGTDHTVDSNGLNDTLDTYIGGSGHDTLTMSDGNDAIWIGNVQGVEV 3342
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ D ++ + + + G DV + G D
Sbjct: 3343 IQAGAGNDVVDMNYSDGTSYGDLTVDGGSGNDAIFTNDGDDVLIGGSGTNYLSGNAGNDT 3402
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
+ + + + + + + + D
Sbjct: 3403 FIGGSGSDAMHG---GAGADTVDYSDSATGVNVYLGAGDGNGYSGSGGVGNSGDAQGDTY 3459
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ V +G G + ++ +V SD G
Sbjct: 3460 SGIENVVGSAHDDYVYGSASGSVADLGAGNDTFDNTEVSSVVKSDTVD-----GGAGNDT 3514
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
+ L A + L L G H + G + T +
Sbjct: 3515 IWTGNGDDTLIGGAGDDQLYGEAGSDTFLFDFGSGHDTVNGGGGSWTDTLDFS 3567
>gi|326671416|ref|XP_683002.5| PREDICTED: matrix metalloproteinase-18-like [Danio rerio]
Length = 770
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 45/126 (35%), Gaps = 24/126 (19%)
Query: 35 LTTHRLSFDITELNPNA-----QEVARWALGEWSKVVDLTFEETS-IHSDIKFISSNN-- 86
T L++ I++ + + R A W++ L F +DI +N
Sbjct: 360 WTNKTLTYKISKFSSKMSSARVKTAFRQAWQLWAQAAPLKFRRKRRSDADIVISFNNKDH 419
Query: 87 -------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ +P +++FD + W G G L A+HE GHALG
Sbjct: 420 NDGSPFDGEGGILAHAFSP--GPGIGGDVHFDDEETWTTN-GSGYNLLPVAVHEFGHALG 476
Query: 134 LMHPGS 139
L H
Sbjct: 477 LSHSSD 482
>gi|291302041|ref|YP_003513319.1| hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
gi|290571261|gb|ADD44226.1| Hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
Length = 639
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 63/248 (25%), Gaps = 32/248 (12%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D +F V D + ++ N + G TI + + + G
Sbjct: 203 DGKDFRFDPGTRLTVDGQAGDDKIDIDKNVKEDVAVFGGKDDDTIHGSDKANVLNGGDGA 262
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + D +S V+ D++ S
Sbjct: 263 DVIHGGGGNDRI-----DAGGNSSGYDVVYGNDGDDTITGGSG----------------- 300
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + DD + GG ++ + E +
Sbjct: 301 ---NDRVAGG---AGNDTIDGGQGKDYLDGQRDDDTIT----GGTEDDVIYGLEGEDVLR 350
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + N + + + G GND + G + G DV G G DT +
Sbjct: 351 GEDGNDYLEGGRDNDRIDGGIGNDTISGGHGEDTLSGGDGRDVLYGGHGKDTVDGGSGLD 410
Query: 315 LYKIYRFE 322
+ +
Sbjct: 411 QAYVQEED 418
>gi|6752871|gb|AAF27914.1|AF218037_1 RTX protein [Aeromonas salmonicida]
Length = 2747
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 48/138 (34%), Gaps = 3/138 (2%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG N I + G N + + +++ G SGND + G S N+ + +GND
Sbjct: 2550 GGEGNDILFGQGGDDFLFGGAGNDILFGGSGNDTLYGESGNDTLYGGSGNDTLYGGAGND 2609
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-YDANEHKQDFLSDVERLRFADQCIDSVN 355
G G D + A + + ++ + F+ D ++
Sbjct: 2610 TLSGGLGNDILV--GGLGNDILKGDAGADTFTWLQGDTTGGTIAKDYVVDFSRAEGDKLD 2667
Query: 356 VKQRSILEYTASYEDLIQ 373
+ + + + DL
Sbjct: 2668 LSDLLDHDGSHNQNDLKG 2685
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 47/146 (32%), Gaps = 30/146 (20%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G E N + + + G +GND++ G S N+ + SGND G SG DT +
Sbjct: 2546 DVLIGGEGNDILFGQGGDDFLFGGAGNDILFGGSGNDTLYGESGNDTLYGGSGNDTLY-- 2603
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
D LS V IL+ A +
Sbjct: 2604 --------------------GGAGNDTLSG------GLGNDILVGGLGNDILKGDAGADT 2637
Query: 371 LIQVIGQDV--FESMKHFYEFGLSEG 394
+ G + + +F +EG
Sbjct: 2638 FTWLQGDTTGGTIAKDYVVDFSRAEG 2663
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 63/214 (29%), Gaps = 16/214 (7%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
Y + D + + +V D+ AV GN I + ++
Sbjct: 1836 YASIGYQISDGANLSNGSKLVIDVAAVADKPTVNVTLTGNGIPSYSPSFPSASITTELFQ 1895
Query: 225 SGGDD------LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG-- 276
SG + L + + N+ + + + + + +VG +
Sbjct: 1896 SGNFNKTAFGITNSLADSSSGQEQVLGNSGNDYIVSTHGGGDLLYGQGGNDVLVGGNATQ 1955
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII--------VY 328
D + G N+V G+D G +G D Y I + + V
Sbjct: 1956 GDSLYGGDGNDVLVSGLGSDGLYGGAGTDIAVLTGNRADYTIKKGSGYSVNDRWFDFSVT 2015
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ L DVE ++FAD L
Sbjct: 2016 EKGAGITKALHDVEYVQFADGIYQLNQSTGELTL 2049
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 45/307 (14%), Positives = 84/307 (27%), Gaps = 41/307 (13%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES--WSSIGGYEK 258
+ +Y ++ + GG + + L+ + + + G
Sbjct: 2375 TTTGQVYGVD---GRWKGVMRPDGKGGYEAVTLSGDRDGNSDQNARDGYALLIAAGVTVD 2431
Query: 259 NMTIAQHTVIESVVGSSGNDV----VIGNSANNVFFESS-----GNDVFDGSSGLDTFFY 309
+ I ++ + G + + + N + G D DG +G D F
Sbjct: 2432 AIGIGDQLSVDDLKGFDSDGKVLTGISADGLANAILGTPVSNLPGTDRLDGGAGDDILFG 2491
Query: 310 YA-----------PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA--DQCIDSVNV 356
A + + +A V DA H E + + D+ +
Sbjct: 2492 DAVHFAGINGEGYAAVKQYVAGKLSAGSVTDAQVHDYISSHASEFDQSSANDKGDVLIGG 2551
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDD-- 410
+ IL + L G D+ G D + + LY G+ +D
Sbjct: 2552 EGNDILFGQGGDDFLFGGAGNDILFGGSGNDTLYGESGNDTLYGGSGNDTLYGGAGNDTL 2611
Query: 411 --------LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
L G+D T +G A +Y+ D DL
Sbjct: 2612 SGGLGNDILVGGLGNDILKGDAGADTFTWLQGDTTGGTIAKDYVVDFSRAEGDKLDLSDL 2671
Query: 463 VQVGKDH 469
+ H
Sbjct: 2672 LDHDGSH 2678
Score = 39.8 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 36/254 (14%), Positives = 64/254 (25%), Gaps = 20/254 (7%)
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
DG G + + + A D + ++L D
Sbjct: 2394 DGKGGYEAVTLSGDRDGNSDQNARDGYALLIAAGVTVDAIGIGDQLSVDD----LKGFDS 2449
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ S + L I ++ G DI F ++ +
Sbjct: 2450 DGKVLTGISADGLANAILGTPVSNLPGTDRLDGGAGDDILFGDAVHF-------AGINGE 2502
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
AA + Y+ + G DA + + + A+ V +G + + G
Sbjct: 2503 GYAAVKQYVAGKLSAGSVTDAQVHDYISSHASEFDQSSANDKGDVLIGGEGNDILFGQGG 2562
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
F D L G+D Y G L A ++ L
Sbjct: 2563 DDFLFG----GAGNDILFGGSGNDTL-----YGESGNDTLYGGSGNDTLYGGAGNDTLSG 2613
Query: 539 AFADAPDLVQAGKD 552
+ + G D
Sbjct: 2614 GLGNDILVGGLGND 2627
>gi|325982333|ref|YP_004294735.1| hypothetical protein NAL212_1700 [Nitrosomonas sp. AL212]
gi|325531852|gb|ADZ26573.1| hypothetical protein NAL212_1700 [Nitrosomonas sp. AL212]
Length = 2008
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 46/112 (41%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G + TI + G +GND+V G S N+ +GND +G G DT
Sbjct: 1629 NDVLFGSGGDDTIGSLGGDDQTSGDTGNDIVFGGSGNDRLSGGNGNDRLNGGLGFDTAVL 1688
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
Y+I + + + + + D L+D+E L+FA + +
Sbjct: 1689 EGELSDYRIEINNDNVTLTQLSNEETDTLTDIELLQFATGSSAVIAYSENEA 1740
>gi|74222658|dbj|BAE42201.1| unnamed protein product [Mus musculus]
Length = 473
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 59/185 (31%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 113 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 172
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 173 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 229
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S + Y P DI +Q
Sbjct: 230 LQHSNNPK---------------SIMYPTYRYLNPST----------FRLSADDIRNIQS 264
Query: 194 IYGAP 198
+YGAP
Sbjct: 265 LYGAP 269
>gi|74213223|dbj|BAE41743.1| unnamed protein product [Mus musculus]
Length = 473
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 59/185 (31%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 113 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 172
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 173 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 229
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S + Y P DI +Q
Sbjct: 230 LQHSNNPK---------------SIMYPTYRYLNPST----------FRLSADDIRNIQS 264
Query: 194 IYGAP 198
+YGAP
Sbjct: 265 LYGAP 269
>gi|74212952|dbj|BAE33415.1| unnamed protein product [Mus musculus]
Length = 473
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 59/185 (31%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 113 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 172
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 173 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 229
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S + Y P DI +Q
Sbjct: 230 LQHSNNPK---------------SIMYPTYRYLNPST----------FRLSADDIRNIQS 264
Query: 194 IYGAP 198
+YGAP
Sbjct: 265 LYGAP 269
>gi|74151801|dbj|BAE29689.1| unnamed protein product [Mus musculus]
gi|74181547|dbj|BAE30039.1| unnamed protein product [Mus musculus]
gi|74191355|dbj|BAE30260.1| unnamed protein product [Mus musculus]
gi|74207241|dbj|BAE30809.1| unnamed protein product [Mus musculus]
Length = 473
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 59/185 (31%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 113 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 172
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 173 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 229
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S + Y P DI +Q
Sbjct: 230 LQHSNNPK---------------SIMYPTYRYLNPST----------FRLSADDIRNIQS 264
Query: 194 IYGAP 198
+YGAP
Sbjct: 265 LYGAP 269
>gi|74142899|dbj|BAE42486.1| unnamed protein product [Mus musculus]
Length = 473
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 59/185 (31%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 113 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 172
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 173 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 229
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S + Y P DI +Q
Sbjct: 230 LQHSNNPK---------------SIMYPTYRYLNPST----------FRLSADDIRNIQS 264
Query: 194 IYGAP 198
+YGAP
Sbjct: 265 LYGAP 269
>gi|115392138|ref|NP_032631.3| macrophage metalloelastase precursor [Mus musculus]
gi|152031638|sp|P34960|MMP12_MOUSE RecName: Full=Macrophage metalloelastase; Short=MME; AltName:
Full=Matrix metalloproteinase-12; Short=MMP-12; Flags:
Precursor
gi|26354881|dbj|BAC41067.1| unnamed protein product [Mus musculus]
gi|74142802|dbj|BAE42446.1| unnamed protein product [Mus musculus]
gi|74142832|dbj|BAE42457.1| unnamed protein product [Mus musculus]
gi|74142834|dbj|BAE42458.1| unnamed protein product [Mus musculus]
gi|74142836|dbj|BAE42459.1| unnamed protein product [Mus musculus]
gi|74142838|dbj|BAE42460.1| unnamed protein product [Mus musculus]
gi|74142866|dbj|BAE42472.1| unnamed protein product [Mus musculus]
gi|74142870|dbj|BAE42474.1| unnamed protein product [Mus musculus]
gi|74142874|dbj|BAE42476.1| unnamed protein product [Mus musculus]
gi|74142878|dbj|BAE42478.1| unnamed protein product [Mus musculus]
gi|74142948|dbj|BAE42502.1| unnamed protein product [Mus musculus]
gi|74142986|dbj|BAE42516.1| unnamed protein product [Mus musculus]
gi|74143029|dbj|BAE42531.1| unnamed protein product [Mus musculus]
gi|74212943|dbj|BAE33411.1| unnamed protein product [Mus musculus]
gi|74212950|dbj|BAE33414.1| unnamed protein product [Mus musculus]
gi|74213230|dbj|BAE41746.1| unnamed protein product [Mus musculus]
gi|74214940|dbj|BAE33469.1| unnamed protein product [Mus musculus]
gi|74218123|dbj|BAE42035.1| unnamed protein product [Mus musculus]
gi|74218134|dbj|BAE42039.1| unnamed protein product [Mus musculus]
gi|74221350|dbj|BAE42154.1| unnamed protein product [Mus musculus]
gi|74221403|dbj|BAE42177.1| unnamed protein product [Mus musculus]
gi|74222891|dbj|BAE42294.1| unnamed protein product [Mus musculus]
Length = 473
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 59/185 (31%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 113 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 172
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 173 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 229
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S + Y P DI +Q
Sbjct: 230 LQHSNNPK---------------SIMYPTYRYLNPST----------FRLSADDIRNIQS 264
Query: 194 IYGAP 198
+YGAP
Sbjct: 265 LYGAP 269
>gi|26354570|dbj|BAC40913.1| unnamed protein product [Mus musculus]
Length = 473
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 59/185 (31%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 113 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 172
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 173 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 229
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S + Y P DI +Q
Sbjct: 230 LQHSNNPK---------------SIMYPTYRYLNPST----------FRLSADDIRNIQS 264
Query: 194 IYGAP 198
+YGAP
Sbjct: 265 LYGAP 269
>gi|71275638|ref|ZP_00651923.1| Hemolysin-type calcium-binding region:Haemolysin-type calcium binding
related [Xylella fastidiosa Dixon]
gi|71897818|ref|ZP_00680044.1| Hemolysin-type calcium-binding region:Haemolysin-type calcium binding
related [Xylella fastidiosa Ann-1]
gi|71163529|gb|EAO13246.1| Hemolysin-type calcium-binding region:Haemolysin-type calcium binding
related [Xylella fastidiosa Dixon]
gi|71732373|gb|EAO34427.1| Hemolysin-type calcium-binding region:Haemolysin-type calcium binding
related [Xylella fastidiosa Ann-1]
Length = 1814
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 16/154 (10%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ S ++ G +LL GG + + ++ G + N + +++
Sbjct: 922 NAEGSDAADLLFGDAGANLL----RGGGGDDVLSGGAGNDTLYGGDGNDALYGDAGNDTL 977
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---------FYYAPSYLYKIYRFE 322
G GND+++G + +++ S G++ +G +G D S +
Sbjct: 978 YGGVGNDLLLGGAGDDLLDGSEGSNRLEGGAGNDVLKVAYWSTDNVLNGGSGDDLLDGSA 1037
Query: 323 NAIIVYDANEHKQDFLS---DVERLRFADQCIDS 353
D L + L F + S
Sbjct: 1038 YGDTYLFNKGDGHDTLIERDGTDTLVFGAGIVAS 1071
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 48/422 (11%), Positives = 115/422 (27%), Gaps = 53/422 (12%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ + + + G G + + + H + +
Sbjct: 1320 GGAGNDVLKVASNSSDNVFSGGTGDDMLYGSAHSDTYLFNQGDGHDTIIEPGGSFDRLVF 1379
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
V QD ++D G+ + + D + Y + I + +
Sbjct: 1380 GEGITADDVRVVRQGQDVVLDLGNGH-DSIRMKDWLTSDGEY--NRTGNIEEILFADGTR 1436
Query: 214 KDSPFI----QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T + + G+D L S + G + ++ +
Sbjct: 1437 WTGDTLGWREMTTFGTSGNDTLQ-------------GWGSSDILLGGNGDDVLSGDYGDD 1483
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------FYYAPSYLYKIY 319
++ G +G+D+++G++ N+V G++ +G +G D + + +Y
Sbjct: 1484 TLYGEAGDDLLLGDNGNDVLDGGEGHNRLEGGAGKDVLKVSTDGSSDNVFSGGTGDDMLY 1543
Query: 320 RFENAIIVYDANEHKQDFLS---DVERLRFADQ----CIDSVNVKQRSILEYTASYE--- 369
++ +D + +++ F ++ I + Q +L+ Y+
Sbjct: 1544 GSVHSDTYLFNRGDGRDTIVEQGGFDKIVFGEEIAVSDIHVLREGQDVVLDLYNGYDSIR 1603
Query: 370 --DLIQVIGQDVFESMKHFYEF-----GLSEGRDITFDSYLYLGSYDDL------RNVFG 416
D + G + F E L D L + G
Sbjct: 1604 LKDWLTSDGTRNSNADIEQIVFADGTVWSGETLSSIGLKTLGSADNDTLNCWNGRNILVG 1663
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
D + + + Y +S+ D + +
Sbjct: 1664 EDGDDVLKVSMFDSSDNVLVGCRGNDMLYGSSNSDTYFFDQGDGHDTIIEQGGADTLEFG 1723
Query: 477 EG 478
EG
Sbjct: 1724 EG 1725
Score = 54.4 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 84/686 (12%), Positives = 149/686 (21%), Gaps = 177/686 (25%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDI------TELNPNAQEVARWAL-----GEWSKVVDL 68
DQ W + + DV+ + S D L+ Q V R A +
Sbjct: 858 DQTWQHNKAQALQDVMDLYHYSSDALAPSGWNPLDALRQMVDRTAATPDGRQALADAGIP 917
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ SD + + R + D G G + +
Sbjct: 918 QIAGNAEGSDAADLLFGDAGANLLRGGGGDDVLSGGAGNDTLYGGDGNDALYGDAGNDTL 977
Query: 129 GHALG---LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+G L+ + G + ++Y+ + + S
Sbjct: 978 YGGVGNDLLLGGAGDDLLDGSEGSNRLEGGAGNDVLKVAYWSTDNVLNGGSG-------- 1029
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
D++ GS + Y T+ + G D L L
Sbjct: 1030 DDLL---------DGSAYGDTYLFN----KGDGHDTLIERDGTDTLVFGAGIVASQVRRL 1076
Query: 246 NTESWSSIGGYEKNMTIA-------QHTVIESV-------------------------VG 273
+ + +I T +S +G
Sbjct: 1077 HEGQDVVLDLGNGQDSIRLKDWLTCYGTRNDSADIEQIVFADGTLWTPETLSSMGLTTLG 1136
Query: 274 SSGNDVVIGNSA--------------------------------------NNVFFESSGN 295
+SGND + G +NV SG+
Sbjct: 1137 TSGNDTLKGWQGKDILLGGDGDDILDGGDGSNRLEGGAGNDVLKVSYWSADNVLNGGSGD 1196
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN--------------------EHKQ 335
D GS DT+ + I + + +
Sbjct: 1197 DTLYGSGHADTYLFNKGDGHDTIVEHYGSEKIVFGAGIVADNVRLLREGQDVVLDLGNGH 1256
Query: 336 DF---------------LSDVERLRFADQCIDSVNVKQR--------------------S 360
D ++E++ FAD + + +
Sbjct: 1257 DSIRFKDCFHANHDRNIFVNIEQMVFADGTVWTGETLSTLGFSTLGGDGDDVLDGGEASN 1316
Query: 361 ILEYTASYEDL-----------IQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGS 407
LE A + L G D+ H F +G D +
Sbjct: 1317 RLEGGAGNDVLKVASNSSDNVFSGGTGDDMLYGSAHSDTYLFNQGDGHDTIIEPGGSFDR 1376
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
+D R + G D+ + +++ S + L G
Sbjct: 1377 -LVFGEGITADDVRVVRQGQDVVLDLGNGHDSIRMKDWLTSDGEYNRTGNIEEILFADGT 1435
Query: 468 -DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
G E L + + G + +G
Sbjct: 1436 RWTGDTLGWREMTTFGTSGNDTLQGWGSSDILLGGNGDDVLS--GDYGDDTLYGEAGDDL 1493
Query: 527 LEYIASHEDLINAFADAPDLVQAGKD 552
L ++ L AGKD
Sbjct: 1494 LLGDNGNDVLDGGEGHNRLEGGAGKD 1519
Score = 37.1 bits (84), Expect = 9.9, Method: Composition-based stats.
Identities = 46/332 (13%), Positives = 93/332 (28%), Gaps = 52/332 (15%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI---- 128
T+ + G + + D G +L N +
Sbjct: 1448 TTFGTSGNDTLQGWGSSDILLGGNGDDVLSGDYGDDTLYGEAGDDLLLGDNGNDVLDGGE 1507
Query: 129 GHA----------LGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
GH L + GS N G D Y + T + + +D++++
Sbjct: 1508 GHNRLEGGAGKDVLKVSTDGSSDNVFSGGTGDDMLYGSVHSDTYLFNRGDGRDTIVEQGG 1567
Query: 178 GYCATPM----VSDIVAVQK-------IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
VSDI +++ +Y + + + + I+ I +
Sbjct: 1568 FDKIVFGEEIAVSDIHVLREGQDVVLDLYNGYDSIRLKDWLTSDGTRNSNADIEQIVFAD 1627
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS---SGNDVVIGN 283
G TL L + ++ + + + + S S ++V++G
Sbjct: 1628 GTVWSGETLSSIGLKT--LGSADNDTLNCWNGRNILVGEDGDDVLKVSMFDSSDNVLVGC 1685
Query: 284 SANNVFFE-----------SSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAIIVYDA 330
N++ + G+D G DT + R + + +
Sbjct: 1686 RGNDMLYGSSNSDTYFFDQGDGHDTIIEQGGADTLEFGEGLHREEACFTRSGDDLSILFN 1745
Query: 331 NEHKQDFLSD--------VERLRFADQCIDSV 354
Q ++ VE L F D + S
Sbjct: 1746 GSEDQVTVAGWFSAAAHQVESLVFQDGTVLSG 1777
>gi|166365607|ref|YP_001657880.1| hypothetical protein MAE_28660 [Microcystis aeruginosa NIES-843]
gi|166087980|dbj|BAG02688.1| hypothetical protein MAE_28660 [Microcystis aeruginosa NIES-843]
Length = 308
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 3/131 (2%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN+IY +GG D LD T ++L T + + +T
Sbjct: 81 GNDIYCFNASTPLGSDTIQETTTGGIDTLDFTG-TNTAVRVNLGTTAVQTAVTNNLKLTF 139
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + IE+++ SGND + GNS NN GND G +G D +
Sbjct: 140 SANNTIENIISDSGNDRLTGNSLNNTLTGGGGNDQLTGQNGNDRLI--GGFGDDLLTGGN 197
Query: 323 NAIIVYDANEH 333
+ + +
Sbjct: 198 GSDNFIFNSSN 208
Score = 44.8 bits (104), Expect = 0.046, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 74/239 (30%), Gaps = 28/239 (11%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF---------------DGSSGLDTFFY 309
+ + G++G++ + GNS NN+ ++GND++ + G+DT +
Sbjct: 52 GSNNINGTGNAGDNKITGNSGNNILAGANGNDIYCFNASTPLGSDTIQETTTGGIDTLDF 111
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTAS 367
+ ++ A+ N K F ++ +E + + L
Sbjct: 112 TGTNTAVRVNLGTTAVQTAVTNNLKLTFSANNTIENIISDSGNDRLTGNSLNNTLTGGGG 171
Query: 368 YEDL---------IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ L I G D+ F + + D+ S D + V
Sbjct: 172 NDQLTGQNGNDRLIGGFGDDLLTGGNGSDNFIFNSSN-LGIDAISDFTSGSD-KIVLSKA 229
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
A + I +G + + + +A+ I + + + G
Sbjct: 230 IFTALQSIIGNGFSQPAEFASVADDDLVATSSAFIVYSNSSGSIYYNQNGSAAGLGSGS 288
>gi|30583961|gb|AAP36229.1| Homo sapiens matrix metalloproteinase 1 (interstitial collagenase)
[synthetic construct]
gi|54697160|gb|AAV38952.1| matrix metalloproteinase 1 (interstitial collagenase) [synthetic
construct]
gi|60654101|gb|AAX29743.1| matrix metalloproteinase 1 [synthetic construct]
gi|60654103|gb|AAX29744.1| matrix metalloproteinase 1 [synthetic construct]
gi|60830074|gb|AAX36910.1| matrix metalloproteinase 1 [synthetic construct]
gi|61368096|gb|AAX43102.1| matrix metalloproteinase 1 [synthetic construct]
Length = 470
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 53/185 (28%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 108 RWEQTHLTYRIENYTPDLPRADVD-------HAIEKAFQLWSNVTPLTFTKVSEGQADIM 160
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 161 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLHRVAA 217
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 218 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIG---PQT 274
Query: 183 PMVSD 187
P D
Sbjct: 275 PKACD 279
>gi|13124330|sp|Q63341|MMP12_RAT RecName: Full=Macrophage metalloelastase; Short=MME; AltName:
Full=Matrix metalloproteinase-12; Short=MMP-12; Flags:
Precursor
gi|1405805|emb|CAA67142.1| macrophage metalloelastase precursor [Rattus norvegicus]
Length = 465
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 64/190 (33%), Gaps = 53/190 (27%)
Query: 35 LTTHRLSFDITELNPNAQEV-----ARWALGEWSKVVDLTFEET-SIHSDIKFIS----- 83
L++ I P+ + + A WS V L F + +DI +
Sbjct: 105 WMKRYLTYRIYNYTPDMKRADVDYIFQKAFQVWSDVTPLRFRKIHKGEADITILFAFGDH 164
Query: 84 ----------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 165 GDFYDFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 221
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--SDIVAV 191
L H + S+M + + T + DI ++
Sbjct: 222 LRHSNNPK-------------------SIM--------YPTYRYLHPNTFRLSADDIHSI 254
Query: 192 QKIYGAPKGS 201
Q +YGAP +
Sbjct: 255 QSLYGAPVKN 264
>gi|238898291|ref|YP_002923972.1| putative RTX-family protein-12 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466050|gb|ACQ67824.1| putative RTX-family protein-12 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 505
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 4/150 (2%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D + Q G L N + + ++ D DL G +
Sbjct: 239 DNLEKQATSGNDVVRLSNAAVLPDNTFRSLEGHDSVIDESDLDLKVYAGTGNDNVLV--- 295
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + N T + + G +G+D + G N+ ++GND +G G DT
Sbjct: 296 -GRDRTDKARKGNKTFYGEAGDDFLAGGAGSDHLYGGIGNDTLQGNTGNDRLEGGEGDDT 354
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+ Y I ++ +QD
Sbjct: 355 YLYTVGHGNDTIKEIGGNDVLVLLGVTEQD 384
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 39/157 (24%), Gaps = 4/157 (2%)
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
++ F G D+ K+Y V + +
Sbjct: 262 DNTFRSLEGHDS-VIDESDLDLKVYAGTGNDNVLVGRDRTDKARKGNKTFYGEAGDDFLA 320
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
L + L G D E + + + G + L V
Sbjct: 321 GGAGSDHLYGGIGNDTLQGNTGNDRLEGGEGDDTYLYTVGHGNDTIKEIGGNDVLVLLGV 380
Query: 415 FGSDRGAAARH---YITHGVKEGRNPDAFKALEYIAS 448
D ++ Y+ +EGR K +Y AS
Sbjct: 381 TEQDVQLERQNDHLYLFIAAREGREAGEIKVEDYFAS 417
>gi|16264481|ref|NP_437273.1| putative calcium-binding exported protein [Sinorhizobium meliloti
1021]
gi|15140618|emb|CAC49133.1| putative calcium-binding exported protein [Sinorhizobium meliloti
1021]
Length = 387
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/315 (13%), Positives = 82/315 (26%), Gaps = 22/315 (6%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
M + + +++ G+ +D + G + ++ + GND G G D Y
Sbjct: 1 MILKGTNLSDTIRGALSDDELWGYAGDDYLDGAEGNDKLFGGDGNDFIVGGLGDD----Y 56
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D L IL+ ++ ++ G D
Sbjct: 57 AEGGTGNDRFDGGLGHDTLKG------GLGNDILDGGDGSDILDGGDGHDQILGGRGHDK 110
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH-------YITHGVK 432
+G DI + G + + G A Y G
Sbjct: 111 IFGGAGEEYIDAGDGDDIIYAGSGDDGFNNRVNPATGQVTQQAVAGGAGHDKIYGEEGND 170
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ + ++ + + G D + G + + +
Sbjct: 171 ALKGQSGNDWVYGGIGNDIVDGGDGNNYLDGGDGNDVLDSEGGIDEAHGGTGNDKIVVGA 230
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D R VFG D Y G + + + ++ L + +AG D
Sbjct: 231 GDDR-VFGDDGDDML--YGEAGNDSLSGGNNYDRIFGGDGNDTLRGDAGRDVLIGEAGTD 287
Query: 553 HFSNFGYEEGRSITF 567
+G + F
Sbjct: 288 --ILWGGADSDRFVF 300
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 84/300 (28%), Gaps = 11/300 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + ++ GDD LD L GG N + G N
Sbjct: 8 LSDTIRGALSDDELWGYAGDDYLDGAEGNDKLFGGDGNDFIVGGLGDDYAEGGTGNDRFD 67
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------YYAPSYLYK 317
+++ G GND++ G +++ G+D G G D F Y
Sbjct: 68 GGLGHDTLKGGLGNDILDGGDGSDILDGGDGHDQILGGRGHDKIFGGAGEEYIDAGDGDD 127
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
I + ++ + + + + L+ + + + IG
Sbjct: 128 IIYAGSGDDGFNNRVNPATGQVTQQAVAGGAGHDKIYGEEGNDALKGQSGNDWVYGGIGN 187
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D+ + +G D+ ++ N R + G
Sbjct: 188 DIVDGGDGNNYLDGGDGNDVLDSEGGIDEAHGGTGNDKIVVGAGDDRVFGDDGDDMLYGE 247
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+L +++ + + G+D + + DS ++ + +
Sbjct: 248 AGNDSLSGGNNYDRIFGGDGNDTLRGDAGRDVLIGEAGTDILWGGADSDRFVFKGAPVLS 307
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 76/282 (26%), Gaps = 11/282 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI----GH 130
D + D + G+G + + + GH
Sbjct: 40 FGGDGNDFIVGGLGDDYAEGGTGNDRFDGGLGHDTLKGGLGNDILDGGDGSDILDGGDGH 99
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L G D + + S ++ ++ + G V+
Sbjct: 100 DQILGGRGHDKIFGGAGEEYIDAGDGDDIIYAGSGDDGFNNRVNPATGQVTQQAVAGGAG 159
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
KIYG +G+ + G++ LD GG N + +
Sbjct: 160 HDKIYG-EEGNDALKGQSGNDWVYGGIGNDIVDGGDGNNYLD----GGDGNDVLDSEGGI 214
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G N I + V G G+D++ G + N+ + D G G DT
Sbjct: 215 DEAHGGTGNDKIVVGAGDDRVFGDDGDDMLYGEAGNDSLSGGNNYDRIFGGDGNDTLR-- 272
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+ + I++ + + L D +D
Sbjct: 273 GDAGRDVLIGEAGTDILWGGADSDRFVFKGAPVLSGQDTVMD 314
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 68/305 (22%), Gaps = 29/305 (9%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
D D G+G LG G
Sbjct: 23 GYAGDDYLDGAEGNDKLFGGDGNDFIVGGLGDDYAEGGTGNDRFDGGLGHDTLKGGLGND 82
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ G D D + G+ + + G G+
Sbjct: 83 ILDGGDGSDILD---------GGDGHDQILGGRGHDKIFGGAGEEYIDAGDGDDIIYAGS 133
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + T G I G E N +
Sbjct: 134 GDDGFNNRVNPATGQVTQQAVAG-------------------GAGHDKIYGEEGNDALKG 174
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + V G GND+V G NN GNDV D G+D + + +
Sbjct: 175 QSGNDWVYGGIGNDIVDGGDGNNYLDGGDGNDVLDSEGGIDEA-HGGTGNDKIVVGAGDD 233
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D + + + L + L A + LI G D+
Sbjct: 234 RVFGDDGDDMLYGEAGNDSLSGGNNYDRIFGGDGNDTLRGDAGRDVLIGEAGTDILWGGA 293
Query: 385 HFYEF 389
F
Sbjct: 294 DSDRF 298
>gi|232261|sp|Q00951|HLYA_ACTSU RecName: Full=Hemolysin; AltName: Full=APPA; AltName: Full=CLY-IIA;
AltName: Full=CYTC; AltName: Full=Cytolysin II; AltName:
Full=HLY-IIA
gi|141828|gb|AAA21918.1| cytolysin [Actinobacillus suis]
Length = 956
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 9/234 (3%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFM--PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G +D +D S Y + Y V D A+ + +
Sbjct: 624 GSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHETIATHQT 683
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++GN KIE +++D F + ++ + N I ++ G
Sbjct: 684 NVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQF-NDIFKGSQFDDVFHGGNGVD 742
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + + + G +G+DV+ G + NN +GND+ G D + + I
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 321 FENAIIVYDANEHKQDFL-----SDVERLRFADQCIDSVN-VKQRSILEYTASY 368
+ ++ + +D S +E + + + N + + A+Y
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRIGNWFLEDDLASTVANY 856
Score = 40.5 bits (93), Expect = 0.91, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 54/219 (24%), Gaps = 48/219 (21%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG---------- 303
N+ ++ T I +GND V S+ V G+D S G
Sbjct: 596 FDDAGNIIESKDTKI-IANLGAGNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDAT 654
Query: 304 --------------LDTFFYYAPSYLYKIYRFENAIIVYDANEHK--------QDFLSDV 341
D+ + ++ + E D L V
Sbjct: 655 AETEKGSYSVKRYVGDSKALHETIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSV 714
Query: 342 ERL---RFAD------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
E + +F D ++ + L G DV +
Sbjct: 715 EEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGG 774
Query: 393 EGRDIT---FDSYLY---LGSYDDLRNVFGSDRGAAARH 425
G DI D+ +Y G +D G A
Sbjct: 775 TGNDIISGGKDNDIYVHKTGDGNDSITDSGGQDKLAFSD 813
>gi|307319321|ref|ZP_07598749.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
gi|306894943|gb|EFN25701.1| Hemolysin-type calcium-binding region [Sinorhizobium meliloti AK83]
Length = 387
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/315 (13%), Positives = 82/315 (26%), Gaps = 22/315 (6%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
M + + +++ G+ +D + G + ++ + GND G G D Y
Sbjct: 1 MILKGTNLSDTIRGALSDDELWGYAGDDYLDGAEGNDKLFGGDGNDFIVGGLGDD----Y 56
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D L IL+ ++ ++ G D
Sbjct: 57 AEGGTGNDRFDGGLGHDTLKG------GLGNDILDGGDGSDILDGGDGHDQILGGRGHDK 110
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH-------YITHGVK 432
+G DI + G + + G A Y G
Sbjct: 111 IFGGAGEEYIDAGDGDDIIYAGSGDDGFNNRVNPATGQVTQQAVAGGAGHDKIYGEEGND 170
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ + ++ + + G D + G + + +
Sbjct: 171 ALKGQSGNDWVYGGIGNDIVDGGDGNNYLDGGDGNDVLDSEGGIDEAHGGTGNDKIVVGA 230
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D R VFG D Y G + + + ++ L + +AG D
Sbjct: 231 GDDR-VFGDDGDDML--YGEAGNDSLSGGNNYDRIFGGDGNDTLRGDAGRDVLIGEAGTD 287
Query: 553 HFSNFGYEEGRSITF 567
+G + F
Sbjct: 288 --ILWGGADSDRFVF 300
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 84/300 (28%), Gaps = 11/300 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + ++ GDD LD L GG N + G N
Sbjct: 8 LSDTIRGALSDDELWGYAGDDYLDGAEGNDKLFGGDGNDFIVGGLGDDYAEGGTGNDRFD 67
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------YYAPSYLYK 317
+++ G GND++ G +++ G+D G G D F Y
Sbjct: 68 GGLGHDTLKGGLGNDILDGGDGSDILDGGDGHDQILGGRGHDKIFGGAGEEYIDAGDGDD 127
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
I + ++ + + + + L+ + + + IG
Sbjct: 128 IIYAGSGDDGFNNRVNPATGQVTQQAVAGGAGHDKIYGEEGNDALKGQSGNDWVYGGIGN 187
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D+ + +G D+ ++ N R + G
Sbjct: 188 DIVDGGDGNNYLDGGDGNDVLDSEGGIDEAHGGTGNDKIVVGAGDDRVFGDDGDDMLYGE 247
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+L +++ + + G+D + + DS ++ + +
Sbjct: 248 AGNDSLSGGNNYDRIFGGDGNDTLRGDAGRDVLIGEAGTDILWGGADSDRFVFKGAPVLS 307
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 76/282 (26%), Gaps = 11/282 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI----GH 130
D + D + G+G + + + GH
Sbjct: 40 FGGDGNDFIVGGLGDDYAEGGTGNDRFDGGLGHDTLKGGLGNDILDGGDGSDILDGGDGH 99
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L G D + + S ++ ++ + G V+
Sbjct: 100 DQILGGRGHDKIFGGAGEEYIDAGDGDDIIYAGSGDDGFNNRVNPATGQVTQQAVAGGAG 159
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
KIYG +G+ + G++ LD GG N + +
Sbjct: 160 HDKIYG-EEGNDALKGQSGNDWVYGGIGNDIVDGGDGNNYLD----GGDGNDVLDSEGGI 214
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G N I + V G G+D++ G + N+ + D G G DT
Sbjct: 215 DEAHGGTGNDKIVVGAGDDRVFGDDGDDMLYGEAGNDSLSGGNNYDRIFGGDGNDTLR-- 272
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+ + I++ + + L D +D
Sbjct: 273 GDAGRDVLIGEAGTDILWGGADSDRFVFKGAPVLSGQDTVMD 314
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 68/305 (22%), Gaps = 29/305 (9%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
D D G+G LG G
Sbjct: 23 GYAGDDYLDGAEGNDKLFGGDGNDFIVGGLGDDYAEGGTGNDRFDGGLGHDTLKGGLGND 82
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ G D D + G+ + + G G+
Sbjct: 83 ILDGGDGSDILD---------GGDGHDQILGGRGHDKIFGGAGEEYIDAGDGDDIIYAGS 133
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + T G I G E N +
Sbjct: 134 GDDGFNNRVNPATGQVTQQAVAG-------------------GAGHDKIYGEEGNDALKG 174
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + V G GND+V G NN GNDV D G+D + + +
Sbjct: 175 QSGNDWVYGGIGNDIVDGGDGNNYLDGGDGNDVLDSEGGIDEA-HGGTGNDKIVVGAGDD 233
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D + + + L + L A + LI G D+
Sbjct: 234 RVFGDDGDDMLYGEAGNDSLSGGNNYDRIFGGDGNDTLRGDAGRDVLIGEAGTDILWGGA 293
Query: 385 HFYEF 389
F
Sbjct: 294 DSDRF 298
>gi|239820612|ref|YP_002947797.1| outer membrane adhesin like proteiin [Variovorax paradoxus S110]
gi|239805465|gb|ACS22531.1| outer membrane adhesin like proteiin [Variovorax paradoxus S110]
Length = 2567
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/353 (15%), Positives = 102/353 (28%), Gaps = 15/353 (4%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S G V + I D+ G G T+ + +G
Sbjct: 2208 SRGGADNLTGGAGGDVFIGGTGNAADTLIGSAGNDLLIGGDGNDTLSGGAGNDVLRGGIG 2267
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G + G + F ++ ++ T + + Q
Sbjct: 2268 --------NGDTMDGGAGSEDLLDFSDGTVAVNFTLVQSAVSTGIANGTGGLGNNDTYQN 2319
Query: 194 IYGAPKGSLGNNIYKIEVQ--QKDSPFIQTIYDSGGD-DLLDLTLIGGVKNYIDLNTESW 250
I G L + + + T+ +GG DLLD + + + S
Sbjct: 2320 IEGVIGTGLADTLTGSASNDIIRGGAGNDTLDGAGGTGDLLDFSDGTAGLTFTLTQSSST 2379
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+S + + E V+G++ D + G+++N+ GNDV +G +G D
Sbjct: 2380 TSFNASAAGLGTDGYKNFEGVIGTAFGDTITGSASNDQLRGGGGNDVINGLAGDDRIV-G 2438
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+N V+D+ + D ++D + A + TAS
Sbjct: 2439 GAGADILTGGADNDTFVFDSAPNAVDSVTDFDASGSAASGDLIELSRGTFTALTTASGNT 2498
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
L + + G + +DS YD + A
Sbjct: 2499 LSAAEFASLNGGGAG---DTVGAGVHVIYDSATGNLYYDTDGLGAANRTLVAT 2548
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 89/670 (13%), Positives = 160/670 (23%), Gaps = 54/670 (8%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPN----AQEVARWALGEWSKVVDL 68
L Q S+ F D + ++ I N + A +
Sbjct: 1891 AIQQLGAGQSISDSFTAVSSDGTASRVVTVTIAGTNDAPVLGSAATPVLAAANEDGGAPV 1950
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
T I S + G D+ I A+ T N
Sbjct: 1951 GAVGTLISSLVNLNPPAGGLDNVTDADNGAITGIALTGANATNGSWWYSTNGGANWA--- 2007
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
A+G + S ++ +S +S + + S T
Sbjct: 2008 --AVGAVSNASALLLAANANTRVYFQGNSNFNGTLSDGITFRAWDQTSGAAGTTVSTV-T 2064
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ + + + + + DS L + G ID
Sbjct: 2065 NGNSSAFSSATDTASITVSAVNDNPVAVADRIIVSDS-TLVTLSANSLLGNDTDIDGLAL 2123
Query: 249 SWSSIGGYEK---------NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-- 297
+ +S+GG N TI+ + + + + + A ++ DV
Sbjct: 2124 TITSVGGAVGISGLTLDAANGTISFTSGSTAGATAGSFQYTVSDGAGGTTTATATIDVRA 2183
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+G DT A + D
Sbjct: 2184 VSSGNGADTIDLSATGTYQASFIDSRGGADNLTGGAGGDVFIG-------------GTGN 2230
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L +A + LI G D G T D D + +
Sbjct: 2231 AADTLIGSAGNDLLIGGDGNDTLSGGAGNDVLRGGIGNGDTMDGGAGSEDLLDFSDGTVA 2290
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASH------EDLINAFADAPDLVQVGKDHFS 471
+ ++ G+ G D + A + +
Sbjct: 2291 VNFTLVQSAVSTGIANGTGGLGNNDTYQNIEGVIGTGLADTLTGSASNDIIRGGAGNDTL 2350
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK--EGRNPDAF-KALE 528
+ G + F ++ ++ + A+A T G K EG AF +
Sbjct: 2351 DGAGGTGDLLDFSDGTAGLTFTLTQSSSTTSFNASAAGLGTDGYKNFEGVIGTAFGDTIT 2410
Query: 529 YIASHEDLINAFADAPDLVQAGKDHF-------SNFGYEEGRSITFNPDLYLTSYD---D 578
AS++ L + AG D G + + F+ D
Sbjct: 2411 GSASNDQLRGGGGNDVINGLAGDDRIVGGAGADILTGGADNDTFVFDSAPNAVDSVTDFD 2470
Query: 579 LWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVD 638
S + +S +F S+ A + + +D +
Sbjct: 2471 ASGSAASGDLIELSRGTFTALTTASGNTLSAAEFASLNGGGAGDTVGAGVHVIYDSATGN 2530
Query: 639 LYTDYFGDGN 648
LY D G G
Sbjct: 2531 LYYDTDGLGA 2540
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 32/98 (32%), Gaps = 6/98 (6%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+ + G + TI +SV G +GND + G + N+ SG+D +G
Sbjct: 2 TTITGSNGNDLLTGTAGSDTINSGNGDDSVSGGAGNDSLNGGAGNDTLDGGSGSDQLNGG 61
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
SG DT Y D L
Sbjct: 62 SGADTLIYNVSENAAA------GTSDVYTGGAGVDTLQ 93
Score = 40.9 bits (94), Expect = 0.75, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 28/66 (42%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
T+ G N + T +I + +++ +S+ G +GND + G S ++
Sbjct: 2 TTITGSNGNDLLTGTAGSDTINSGNGDDSVSGGAGNDSLNGGAGNDTLDGGSGSDQLNGG 61
Query: 293 SGNDVF 298
SG D
Sbjct: 62 SGADTL 67
>gi|326914434|ref|XP_003203530.1| PREDICTED: matrix metalloproteinase-27-like [Meleagris gallopavo]
Length = 472
Score = 67.1 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 64/197 (32%), Gaps = 50/197 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T D+ + + A WS V L F +DI
Sbjct: 112 WKKNNLTYRTVNYTPDMSKEDVDK-------AIQKAFKVWSTVTPLIFTRIQEGIADIMI 164
Query: 82 ISSNNGYVCTPRY--------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY S + +++FD+ + W G G L A HE
Sbjct: 165 AFGRKAHGHCPRYFDGPLGVLAHAFPPGSGFGGDVHFDEDEDWTTG-SDGFNLFLVAAHE 223
Query: 128 IGHALGLMHPGSY-NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
+GHALGL H +P Y + E + +P
Sbjct: 224 VGHALGLSHSNDQRALMFPNYAYTSPSE------------------------FPLSP--D 257
Query: 187 DIVAVQKIYGAPKGSLG 203
DI +Q IYG+ + G
Sbjct: 258 DISGIQSIYGSATKTPG 274
>gi|165976376|ref|YP_001651969.1| hemolysin A [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|165876477|gb|ABY69525.1| hemolysin A [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
Length = 956
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 9/234 (3%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFM--PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G +D +D S Y + Y V D A+ + +
Sbjct: 624 GSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHETIATHQT 683
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++GN KIE +++D F + ++ + N I ++ G
Sbjct: 684 NVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQF-NDIFKGSQFDDVFHGGNGVD 742
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + + + G +G+DV+ G + NN +GND+ G D + + I
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 321 FENAIIVYDANEHKQDFL-----SDVERLRFADQCIDSVN-VKQRSILEYTASY 368
+ ++ + +D S +E + + + N + + A+Y
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRIGNWFLEDDLASTVANY 856
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 61/212 (28%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT----ESWS------------- 251
I G D + + ID S+S
Sbjct: 617 GNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHE 676
Query: 252 SIGGYEKNMT--------------------------------------IAQHTVIESVV- 272
+I ++ N+ I + + + V
Sbjct: 677 TIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQFNDIFKGSQFDDVFH 736
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G D + GN ++ F +G+DV DG +G + F + I ++ I
Sbjct: 737 GGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNN--FLVGGTGNDIISGGKDNDIYVHKTG 794
Query: 333 HKQDFLSDV---ERLRFADQCIDSVNVKQRSI 361
D ++D ++L F+D + + K+
Sbjct: 795 DGNDSITDSGGQDKLAFSDVNLKDLTFKKVDS 826
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 54/219 (24%), Gaps = 48/219 (21%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG---------- 303
N+ ++ T I +GND V S+ V G+D S G
Sbjct: 596 FDDAGNIIESKDTKI-IANLGAGNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDAT 654
Query: 304 --------------LDTFFYYAPSYLYKIYRFENAIIVYDANEHK--------QDFLSDV 341
D+ + ++ + E D L V
Sbjct: 655 AETEKGSYSVKRYVGDSKALHETIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSV 714
Query: 342 ERL---RFAD------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
E + +F D ++ + L G DV +
Sbjct: 715 EEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGG 774
Query: 393 EGRDIT---FDSYLY---LGSYDDLRNVFGSDRGAAARH 425
G DI D+ +Y G +D G A
Sbjct: 775 TGNDIISGGKDNDIYVHKTGDGNDSITDSGGQDKLAFSD 813
>gi|16126847|ref|NP_421411.1| calcium-binding protein [Caulobacter crescentus CB15]
gi|13424183|gb|AAK24579.1| calcium-binding protein [Caulobacter crescentus CB15]
Length = 650
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/318 (13%), Positives = 88/318 (27%), Gaps = 18/318 (5%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + D G G +A + L L + GG
Sbjct: 45 NDVLQGGDGDDYMLGGPGNDTLDGGAGSDWAAYEDATAGVKVDLNLSGAQNTGGGGTDRL 104
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ S + + + + T D ++G+ +
Sbjct: 105 TSIENLYGSAFNDTLIGNAGDNMITGGAGADSITGGKGDDT----LWGSAGNDTLDGG-D 159
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT----IAQ 264
+ I G D T + +IG + ++ +
Sbjct: 160 GDDWMVGGAGDDVIKGGAGGDWSSYEDATAGVTVDLTKTTAQDTIGAGKDTLSGVENLWG 219
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGND---------VFDGSSGLDTFFYYAPSYL 315
+ + G +G++ + G++ ++ + +G+D V DG G DT Y +
Sbjct: 220 SKFADVLTGDAGSNYIWGDAGDDKLYGGAGDDFFAGGAGVNVIDGGEGFDTIDYGMSAVG 279
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
++ N + D LS +E + + + + L A + L
Sbjct: 280 VEVDLSRNIATSRFGDTSISDTLSSIELVTGSIYADFIIGNMAENYLYGDAGNDVLRAEG 339
Query: 376 GQDVFESMKHFYEFGLSE 393
G DV E + S
Sbjct: 340 GGDVLEGGEGDDFLIGSL 357
>gi|307261439|ref|ZP_07543110.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306868834|gb|EFN00640.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 956
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 9/234 (3%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFM--PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G +D +D S Y + Y V D A+ + +
Sbjct: 624 GSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHETIATHQT 683
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++GN KIE +++D F + ++ + N I ++ G
Sbjct: 684 NVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQF-NDIFKGSQFDDVFHGGNGVD 742
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + + + G +G+DV+ G + NN +GND+ G D + + I
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 321 FENAIIVYDANEHKQDFL-----SDVERLRFADQCIDSVN-VKQRSILEYTASY 368
+ ++ + +D S +E + + + N + + A+Y
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRIGNWFLEDDLASTVANY 856
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 61/212 (28%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT----ESWS------------- 251
I G D + + ID S+S
Sbjct: 617 GNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHE 676
Query: 252 SIGGYEKNMT--------------------------------------IAQHTVIESVV- 272
+I ++ N+ I + + + V
Sbjct: 677 TIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQFNDIFKGSQFDDVFH 736
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G D + GN ++ F +G+DV DG +G + F + I ++ I
Sbjct: 737 GGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNN--FLVGGTGNDIISGGKDNDIYVHKTG 794
Query: 333 HKQDFLSDV---ERLRFADQCIDSVNVKQRSI 361
D ++D ++L F+D + + K+
Sbjct: 795 DGNDSITDSGGQDKLAFSDVNLKDLTFKKVDS 826
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 54/219 (24%), Gaps = 48/219 (21%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG---------- 303
N+ ++ T I +GND V S+ V G+D S G
Sbjct: 596 FDDAGNIIESKDTKI-IANLGAGNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDAT 654
Query: 304 --------------LDTFFYYAPSYLYKIYRFENAIIVYDANEHK--------QDFLSDV 341
D+ + ++ + E D L V
Sbjct: 655 AETEKGSYSVKRYVGDSKALHETIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSV 714
Query: 342 ERL---RFAD------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
E + +F D ++ + L G DV +
Sbjct: 715 EEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGG 774
Query: 393 EGRDIT---FDSYLY---LGSYDDLRNVFGSDRGAAARH 425
G DI D+ +Y G +D G A
Sbjct: 775 TGNDIISGGKDNDIYVHKTGDGNDSITDSGGQDKLAFSD 813
>gi|83855210|ref|ZP_00948740.1| type I secretion target repeat protein [Sulfitobacter sp. NAS-14.1]
gi|83843053|gb|EAP82220.1| type I secretion target repeat protein [Sulfitobacter sp. NAS-14.1]
Length = 341
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 58/210 (27%), Gaps = 12/210 (5%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
D G ++ T + T I G + IA + + V +G+
Sbjct: 41 GAAAFIDIGVEEEESATDDDAPAGDVISGTPRDDLIIGSGGSDQIAGYGGDDLVEARNGD 100
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D V G+S ++ +GND G+ G D + D
Sbjct: 101 DTVFGDSGDDTLRGGAGNDDLHGNDGDDLLV----GAEDADGLTGHNDDDILQGGVGHDT 156
Query: 338 LSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
L+ + L + +L + L G D + +
Sbjct: 157 LNGSAGGDTLFGDSGDDAVMGGLGDDLLIGGRGQDALFGGWGNDTIDGTVDPDR---QDA 213
Query: 395 RDITFDSYLYL--GSYDDLRNVFGSDRGAA 422
R D YL G DD+ +D
Sbjct: 214 RVTDIDEGDYLNGGGGDDVILAGSNDTVTP 243
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 12/171 (7%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
Y + + T++ GDD L + L G + + + E + G+ +
Sbjct: 88 YGGDDLVEARNGDDTVFGDSGDDTLRGGAGNDDLHGNDGDDLLVGAEDADGLTGHNDDDI 147
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ +++ GS+G D + G+S ++ G+D+ G G D F +
Sbjct: 148 LQGGVGHDTLNGSAGGDTLFGDSGDDAVMGGLGDDLLIGGRGQDALFGGWGNDTIDGTVD 207
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + D+L+ D + + A +D+I
Sbjct: 208 PDRQDARVTDIDEGDYLNG-------GGGDDVILAGSNDTVTPGAGRDDVI 251
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 65/219 (29%), Gaps = 16/219 (7%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
I + E ++ I+ + ++GS G+D + G +++ +G+D G
Sbjct: 47 DIGVEEEESATDDDAPAGDVISGTPRDDLIIGSGGSDQIAGYGGDDLVEARNGDDTVFGD 106
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
SG DT + ++ + ++ A + L +
Sbjct: 107 SGDDTLR--GGAGNDDLHGNDGDDLLVGAEDADG--------LTGHNDDDILQGGVGHDT 156
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L +A + L G D G+D F + D + DR
Sbjct: 157 LNGSAGGDTLFGDSGDDAVMGGLGDDLLIGGRGQDALFGGWG----NDTIDGTVDPDRQD 212
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
A I G + N + S++ +
Sbjct: 213 ARVTDIDEG--DYLNGGGGDDVILAGSNDTVTPGAGRDD 249
>gi|56697211|ref|YP_167575.1| type I secretion target repeat-containing protein [Ruegeria
pomeroyi DSS-3]
gi|56678948|gb|AAV95614.1| type I secretion target repeat protein [Ruegeria pomeroyi DSS-3]
Length = 464
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 70/270 (25%), Gaps = 32/270 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + +I+ G+D D L G + + G +
Sbjct: 65 TGDDTLSGAGGDDSIFAGSGNDSADGGTGNDVLRGKDGDDTLTGGAGDDLLHGSTGLDVL 124
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ +++ G G D + GNS ++ +G+D+ G G D+
Sbjct: 125 SGGAGTDTLQGGFGGDRLFGNSGDDSLDGGAGSDLIFGGDGNDSA-------------DG 171
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ D LS D L A + L+ G D
Sbjct: 172 GTGDDVLRGQGGDDTLSG------GDGADLLHGSTGLDHLYGDAGSDTLLGGYGGDHLSG 225
Query: 383 MKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
G D+ + G+ DD + D G R
Sbjct: 226 GAGDDSLDGGVGPDVINAGEGNDTALGGTGDDRLSGQDGDDSL----SGGDGADLLRGGL 281
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKD 468
L ++ L+ + + G D
Sbjct: 282 GRDVLLGGNQNDTLLGGYGPDSLYGEAGND 311
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/323 (13%), Positives = 77/323 (23%), Gaps = 16/323 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
S G + S DV R G T+ + + GL
Sbjct: 63 GGTGDDTLSGAGGDDSIFAGSGNDSADGGTGNDVLRGKDGDDTLTGGAGDDLLHGSTGLD 122
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + G ++ G + + ++
Sbjct: 123 VLSGGAGTDTLQGGFGGDRLFGNSGDDSLDGGAGSDLIFGGDGNDSADGGTGDDVLRGQG 182
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G S G+ S + +Y G D L +GG S+ G
Sbjct: 183 GDDTLSGGDGA----DLLHGSTGLDHLYGDAGSDTL----LGGYGGDHLSGGAGDDSLDG 234
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
I ++ +G +G+D + G ++ G D+ G G D +
Sbjct: 235 GVGPDVINAGEGNDTALGGTGDDRLSGQDGDDSLSGGDGADLLRGGLGRD--VLLGGNQN 292
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS------YE 369
+ +Y + L D++ + + +
Sbjct: 293 DTLLGGYGPDSLYGEAGNDSLDGGTGGDLLDGGTGEDTIMGIVGRLGNAASGIQDELDRD 352
Query: 370 DLIQVIGQDVFESMKHFYEFGLS 392
+I G D G
Sbjct: 353 TIIGGAGDDELWLGSGDQATGGG 375
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 32/280 (11%), Positives = 56/280 (20%), Gaps = 40/280 (14%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G+D++ GN N +G+D G+ G D+ F + +
Sbjct: 45 GTDGHDLLQGNDLANWINGGTGDDTLSGAGGDDSIFAGSGNDSAD--------------- 89
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+L + L G D+
Sbjct: 90 ----------------------GGTGNDVLRGKDGDDTLTGGAGDDLLHGSTGLDVLSGG 127
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
G D + + + + + + G L + L
Sbjct: 128 AGTDTLQGGFGGDRLFGNSGDDSLDGGAGSDLIFGGDGNDSADGGTGDDVLRGQGGDDTL 187
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
G DH + + G D G
Sbjct: 188 SGGDGADLLHGSTGLDHLYGDAGSDTLLGGYGGDHLSGGAGDDSLDGGVGPDVINA---G 244
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G L + L G+D
Sbjct: 245 EGNDTALGGTGDDRLSGQDGDDSLSGGDGADLLRGGLGRD 284
>gi|111955033|ref|NP_034940.2| matrilysin [Mus musculus]
gi|74190529|dbj|BAE25921.1| unnamed protein product [Mus musculus]
gi|111306729|gb|AAI20656.1| Matrix metallopeptidase 7 [Mus musculus]
gi|111599927|gb|AAI19058.1| Matrix metallopeptidase 7 [Mus musculus]
gi|220938620|emb|CAX16110.1| matrix metallopeptidase 7 [Mus musculus]
Length = 267
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 69/215 (32%), Gaps = 52/215 (24%)
Query: 4 IKPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGE 61
KP +A++ L W + + Y+ T+ + ++ + AL
Sbjct: 86 QKPRCGVPDVAEYSLMPNSPKWHSRIVTYRIVSYTSDLPRIVVD-------QIVKKALRM 138
Query: 62 WSKVVDLTFEETS-IHSDIKFIS---------------SNNGYVCTPRYDSRYFMEINFD 105
WS + L F+ S +DI + G+ P + +FD
Sbjct: 139 WSMQIPLNFKRVSWGTADIIIGFARRDHGDSFPFDGPGNTLGHAFAP--GPGLGGDAHFD 196
Query: 106 KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
K + W G G A HE GH+LGL H S +VM
Sbjct: 197 KDEYWTDGEDAGVNFLFAATHEFGHSLGLSHS-------------------SVPGTVMY- 236
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
D S + T DI +QK+YG
Sbjct: 237 ---PTYQRDYSEDFSLTK--DDIAGIQKLYGKRNT 266
>gi|254469706|ref|ZP_05083111.1| type I secretion target repeat protein [Pseudovibrio sp. JE062]
gi|211961541|gb|EEA96736.1| type I secretion target repeat protein [Pseudovibrio sp. JE062]
Length = 2247
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 71/486 (14%), Positives = 128/486 (26%), Gaps = 68/486 (13%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL--HEIGHALGLMHP--GSY 140
R DS D G G T + EI + G
Sbjct: 892 GGAGSDFLRGDSGNDYLDGGIGDDELYGGSGDDTYIFGRGYGRDEINSSAGGNDTVRFID 951
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ +Y S + ++DAS + +D ++KI G
Sbjct: 952 LNLEDAFINIANYGR-SLQFTWEKDGQFDQLLIDASGSWIERYEFADGTVLKKIEVLDDG 1010
Query: 201 S-----------LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ N + +T+ + D + G N
Sbjct: 1011 RIQITKINDLEEVQENTDFNTTPLVGTQSAETLKGTYLGDTI----RGLDGNDTLSGLNG 1066
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G E N ++ + + + G +G+D + G+S N+ G+D G SG DT+ +
Sbjct: 1067 NDTLEGGEGNDSLYGNNHDDRLFGGTGSDFLRGDSGNDYLDGGIGDDELYGGSGDDTYIF 1126
Query: 310 YAPSYLYKI-YRFENAIIVYDANEHKQDFL-----------------------------S 339
+I V + + +D +
Sbjct: 1127 GRGYGRDEINSSAGGNDTVRFIDLNFEDAFIRLADFDNKLQLTWEYNGVLDTLLIDARGA 1186
Query: 340 DVERLRFADQCIDS-VNVKQRSILEYTASYEDL-----IQVIGQDVFESMKHFYEFGLSE 393
+ER FAD I S + V + T + + + + + + G
Sbjct: 1187 WIERYEFADGTILSKIEVLSDGSIRVTKLDNETFILENVGLSSTPIIGTAQGERIDGTYL 1246
Query: 394 G---RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G R + D LY D + Y + L + ++
Sbjct: 1247 GDTVRGLDGDDKLYGLDGRDTLEGDEGNDSL----YGGNHDDRLFGGAGSDELNGDSGND 1302
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
L D G D + GR D +D + A +
Sbjct: 1303 YLDGGIGDDELYGGSGDDTYIF-----GRGYGRDEINSSAGGNDTVRFIDLNLEDAFINI 1357
Query: 511 ITHGVK 516
+G
Sbjct: 1358 ANYGRS 1363
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 50/324 (15%), Positives = 89/324 (27%), Gaps = 48/324 (14%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TL+ G +N I I Y + ++ + + G +G+D + G+S N+
Sbjct: 653 DNTLLTGEQNDIVRGLAGDDLIKTYSGDDSLKGGAGDDRLFGGAGSDELNGDSGNDYLDG 712
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENAIIVYDANEHKQDFLSD---------- 340
G+D G SG DT+ + +I V + + +D +
Sbjct: 713 GIGDDELYGGSGDDTYIFGRGYGRDEINSSAGGNDTVRFIDLNLEDAFINIANYGRSLQF 772
Query: 341 -------------------VERLRFADQCIDSVNVKQRSILEYTASYEDLI------QVI 375
+ER FAD + + +D I +
Sbjct: 773 TWEKDGQFDQLLIDASGSWIERYEFADGTVLKKIEVLDDLSVKATLIDDTIRILENTGLS 832
Query: 376 GQDVFESMKHFYEFGLSEG---RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+ + + G G R + D LY D + Y +
Sbjct: 833 STPIIGTAQGERIDGTYLGDTVRGLDGDDKLYGLDGRDTLEGGEGNDSL----YGGNHDD 888
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
L + ++ L D G D + GR D
Sbjct: 889 RLFGGAGSDFLRGDSGNDYLDGGIGDDELYGGSGDDTYIF-----GRGYGRDEINSSAGG 943
Query: 493 DDLRNVFGSDRGAAARHYITHGVK 516
+D + A + +G
Sbjct: 944 NDTVRFIDLNLEDAFINIANYGRS 967
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 56/430 (13%), Positives = 111/430 (25%), Gaps = 83/430 (19%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL--HEIGHALGLMHP--GSY 140
DS D G G T + EI + G
Sbjct: 1288 GGAGSDELNGDSGNDYLDGGIGDDELYGGSGDDTYIFGRGYGRDEINSSAGGNDTVRFID 1347
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ +Y S + ++DAS + +D ++KI
Sbjct: 1348 LNLEDAFINIANYGR-SLQFTWEKDGQFDQLLIDASGSWIERYEFADGTVLKKIEVLDDL 1406
Query: 201 SLGNNIYKIEVQQKDSPFIQT--IYDSGGDDLLDLTLIGGVKNYIDLNT-----ESWSSI 253
S+ + ++ ++ + + I + + +D T +G +D + + ++
Sbjct: 1407 SVKATLIDDTIRILENTGLSSTPIIGTAQGERIDGTYLGDTVRGLDGDDKLYGLDGRDTL 1466
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G E N ++ + + G +G+D + G+S N+ G+D G SG DT+ +
Sbjct: 1467 EGGEGNDSLYGGNHDDRLFGGAGSDFLRGDSGNDYLDGGIGDDELYGGSGDDTYIFGRGY 1526
Query: 314 YLYKI-YRFENAIIVYDANEHKQDFLSD-----------------------------VER 343
+I V + + +D + +ER
Sbjct: 1527 GRDEINSSSGGNDTVRFIDLNLEDAFINIANSGRSLQFTWERGGQFDQLLIDASGSWIER 1586
Query: 344 LRFADQCI-----------------------------------------DSVNVKQRSIL 362
FAD + +
Sbjct: 1587 YEFADGTVLKKIEVLDDLSVKATLIDDTIRVLENTGLSSTPIVGTAQGERIDGTYLGDTI 1646
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L + G+D E + D F + D N +
Sbjct: 1647 RGLDGRDKLYGLDGRDTLEGGEGNDSLYGGNHHDQLFGAAGSDFLRGDSGNDYLDGGIGD 1706
Query: 423 ARHYITHGVK 432
+ G
Sbjct: 1707 DELFGGSGDD 1716
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 72/496 (14%), Positives = 132/496 (26%), Gaps = 92/496 (18%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL--HEIGHALGLMHPGSY-N 141
R DS D G G T + EI + G + +
Sbjct: 1486 GGAGSDFLRGDSGNDYLDGGIGDDELYGGSGDDTYIFGRGYGRDEINSSSGGNDTVRFID 1545
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI-----YG 196
++ S + ++DAS + +D ++KI
Sbjct: 1546 LNLEDAFINIANSGRSLQFTWERGGQFDQLLIDASGSWIERYEFADGTVLKKIEVLDDLS 1605
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT-----ESWS 251
+ + I +E S I + + +D T +G +D +
Sbjct: 1606 VKATLIDDTIRVLENTGLSSTP---IVGTAQGERIDGTYLGDTIRGLDGRDKLYGLDGRD 1662
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G E N ++ + + G++G+D + G+S N+ G+D G SG DT+ +
Sbjct: 1663 TLEGGEGNDSLYGGNHHDQLFGAAGSDFLRGDSGNDYLDGGIGDDELFGGSGDDTYIFGR 1722
Query: 312 PSYLYKI-YRFENAIIVYDANEHKQDFLSD-----------------------------V 341
+I V + + +D + +
Sbjct: 1723 GYGRDEINSSSGGNDTVRFIDLNLEDAFINIANSGRSLQFTWERGGQFDQLLIDAEGARI 1782
Query: 342 ERLRFADQCIDSVNVKQRSI-----------------------LEYTASYEDLIQVIGQD 378
ER FAD + + + TA E + D
Sbjct: 1783 ERYEFADGTVLKKIEVLDDLSVKATLIDDTIRVLENTGLSSTPIVGTAHGERIDGTYLGD 1842
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ + +GRD L G+D H+ G +
Sbjct: 1843 TIRGLDGRDKLYGLDGRD-------------TLEGGEGNDSLYGGNHHDQLFGAAGSDFL 1889
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ ++ L D G D + GR D +D
Sbjct: 1890 RGDSG-----NDYLDGGIGDDELFGGSGDDTYIF-----GRGYGRDEINSSSGGNDTVRF 1939
Query: 499 FGSDRGAAARHYITHG 514
+ A Y +G
Sbjct: 1940 IDLNLEDAMLSYTRYG 1955
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 59/290 (20%), Gaps = 46/290 (15%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I E + G+ D V G ++ + G D +G G D+ +
Sbjct: 836 IIGTAQGERIDGTYLGDTVRGLDGDDKLYGLDGRDTLEGGEGNDSLY------------- 882
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ L + + L IG D
Sbjct: 883 ------------------------GGNHDDRLFGGAGSDFLRGDSGNDYLDGGIGDDELY 918
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG---RNPD 438
+ GR D +D + A + +G
Sbjct: 919 GGSGDDTYIF--GRGYGRDEINSSAGGNDTVRFIDLNLEDAFINIANYGRSLQFTWEKDG 976
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
F L AS + + + + D
Sbjct: 977 QFDQLLIDASGSWIERYEFADGT----VLKKIEVLDDGRIQITKINDLEEVQENTDFNTT 1032
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
+A T+ R D L + ++ L +
Sbjct: 1033 PLVGTQSAETLKGTYLGDTIRGLDGNDTLSGLNGNDTLEGGEGNDSLYGN 1082
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 69/290 (23%), Gaps = 32/290 (11%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E++ G+ D + G N+ +GND +G G D+ + ++ +++ +
Sbjct: 1041 ETLKGTYLGDTIRGLDGNDTLSGLNGNDTLEGGEGNDSLY--GNNHDDRLFGGTGSD--- 1095
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG-----QDVFESM 383
LR L + + I G +
Sbjct: 1096 --------------FLRGDSGNDYLDGGIGDDELYGGSGDDTYIFGRGYGRDEINSSAGG 1141
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
F D+ F+ + D + + + F
Sbjct: 1142 NDTVRFI-----DLNFEDAFIRLADFDNKLQLTWEYNGVLDTLLIDARGAWIERYEFADG 1196
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
++ E L + L N G + + V G D
Sbjct: 1197 TILSKIEVLSDGSIRVTKLDNETFI-LENVGLSSTPIIGTAQGERIDGTYLGDTVRGLDG 1255
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
Y G + +L + L +G D+
Sbjct: 1256 DDKL--YGLDGRDTLEGDEGNDSLYGGNHDDRLFGGAGSDELNGDSGNDY 1303
Score = 40.9 bits (94), Expect = 0.78, Method: Composition-based stats.
Identities = 57/496 (11%), Positives = 112/496 (22%), Gaps = 70/496 (14%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D S T + D G G + + + +G
Sbjct: 1056 DGNDTLSGLNGNDTLEGGEGNDSLYGNNHDDRLFGGTGSDFLRGDSGNDYLDGGIGDDEL 1115
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G Y Y D +S + ++ + + + + Y
Sbjct: 1116 YGG-SGDDTYIFGRGYGRDEINSSAGGNDTVRFIDLNFEDAFIRLADFDNKLQLTWEY-- 1172
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-DLNTESWSSIGGY 256
N + + +I+ + G L + ++ + L+ E++
Sbjct: 1173 ------NGVLDTLLIDARGAWIERYEFADGTILSKIEVLSDGSIRVTKLDNETFILENVG 1226
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ I E + G+ D V G ++ + G D +G G D+ +
Sbjct: 1227 LSSTPIIGTAQGERIDGTYLGDTVRGLDGDDKLYGLDGRDTLEGDEGNDSLY-------- 1278
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ L + + L IG
Sbjct: 1279 -----------------------------GGNHDDRLFGGAGSDELNGDSGNDYLDGGIG 1309
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG-- 434
D + GR D +D + A + +G
Sbjct: 1310 DDELYGGSGDDTYIF--GRGYGRDEINSSAGGNDTVRFIDLNLEDAFINIANYGRSLQFT 1367
Query: 435 -RNPDAFKALEYIASHE----------------DLINAFADAPDLVQVGKDHFSNFGCEE 477
F L AS ++++ + L+ N G
Sbjct: 1368 WEKDGQFDQLLIDASGSWIERYEFADGTVLKKIEVLDDLSVKATLIDDTIRILENTGLSS 1427
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
+ + V G D Y G + +L + L
Sbjct: 1428 TPIIGTAQGERIDGTYLGDTVRGLDGDDKL--YGLDGRDTLEGGEGNDSLYGGNHDDRLF 1485
Query: 538 NAFADAPDLVQAGKDH 553
+G D+
Sbjct: 1486 GGAGSDFLRGDSGNDY 1501
>gi|149633275|ref|XP_001509119.1| PREDICTED: similar to type I interstitial collagenase
[Ornithorhynchus anatinus]
Length = 465
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/193 (23%), Positives = 60/193 (31%), Gaps = 49/193 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVA-RWALGEWSKVVDLTFEET-SIHSDIK 80
W I Y+ T H L+ ++A + A WSKV LTF + +DI
Sbjct: 106 WDKTEITYRIVKYTRH--------LSKADVDMAIKKAFQVWSKVSPLTFTKVWKEEADIM 157
Query: 81 FIS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+N P +I+FD+ + W L A HE
Sbjct: 158 ISFFSGDHYDNSPFYGPDGVLAHAFPPGKLIGGDIHFDEDETWTKS-HLNYNLFLVAAHE 216
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
IGHALGL H S + S M D
Sbjct: 217 IGHALGLAHSQDIG------------ALMSPVYSYM-------------DIDPFKLPQDD 251
Query: 188 IVAVQKIYGAPKG 200
I +QKIYG K
Sbjct: 252 IDGIQKIYGPSKS 264
>gi|46202304|ref|ZP_00053438.2| COG2931: RTX toxins and related Ca2+-binding proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 1880
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 61/405 (15%), Positives = 105/405 (25%), Gaps = 25/405 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
SD + N D I D D T+ N L + +
Sbjct: 1020 GSDTMSGGAGNDTFLISNNDGSTDTFIGGDGTDTIMGNWSYDTLKVDNHLANLQGIEVID 1079
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G + E D +V S+ + + D G +S +
Sbjct: 1080 GGDGTPAYNTIQGGSGNDELDFSGMTVKSFVIDGGAGNDTITGTSGNDTISGGAGSDTMS 1139
Query: 196 GA--PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES---- 249
G L +N TI + D L + I++
Sbjct: 1140 GGAGNDTFLISNNDGSTDTFIGGDGTDTIMGNWSYDTLKVDNHLANLQGIEVIDGGDGTP 1199
Query: 250 -WSSIGGYEKNMTIAQ---HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+++I G N + + G +GND + G S N+ +G+D G +G D
Sbjct: 1200 AYNTIQGGSGNDELDFSGMTVKSFVIDGGAGNDTITGTSGNDTISGGAGSDTMSGGAGND 1259
Query: 306 TFFYYAPSYL-YKIYRFENAIIVYDANEHKQ-------DFLSDVERLRFADQC---IDSV 354
TF + + + L +E + D
Sbjct: 1260 TFLISNNDGSTDTFIGGDGTDTIMGNWSYDTLKVDNHLANLQGIEVIDGGDGTTSYNTIQ 1319
Query: 355 NVKQRSILEYTA---SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
L+++ + G D G D + +GS D
Sbjct: 1320 AGSGNDELDFSGMTVKNFVIDGGAGNDTITGTAGADTIQAGTGNDTVIANQGSVGS-DVY 1378
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
G+D + + F+A +SH F
Sbjct: 1379 HGGAGTDTLQVNLTSAQYTTEVRAELQQFQAFAADSSHAGQTFTF 1423
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/463 (11%), Positives = 107/463 (23%), Gaps = 73/463 (15%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI------ 128
++ + T DV G + N I
Sbjct: 642 GSANTSQTLAGTAGADTLVGGGGNDTLTGGAGNDVLYGDAGPNSGGPFNVALNIDASATV 701
Query: 129 -GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
G +G + G + ++ + L++ + + + F D
Sbjct: 702 NGEHVGTITLTGLPDGANLSAGVHNADGSWTLSAGDLHGLTANVADATPFNVGIAVQTVD 761
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ + + T+Y GG+D ++ G +
Sbjct: 762 GTSTHVTTSSMSVDFHSTTVDGNDTISGGAGSDTMYGGGGNDTFLISDNDGSTDTFIGGD 821
Query: 248 ESWSSIG--------------------------GYEKNMTIAQHTVIESVV--------- 272
+ + +G G TI + + +
Sbjct: 822 GTDTIMGNWSYDTLKVDNHLANLQGIEVIDGGDGTPAYNTIQAGSGNDELDFSGMTVKSF 881
Query: 273 ---GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-YKIYRFENAIIVY 328
G +GND + G S N+ +G+D G +G DTF + +
Sbjct: 882 VIDGGAGNDTITGTSGNDTISGGAGSDTMSGGAGNDTFLISNNDGSTDTFIGGDGTDTIM 941
Query: 329 DANEHKQ-------DFLSDVERLRFADQC---IDSVNVKQRS------------ILEYTA 366
+ L +E + D +++ A
Sbjct: 942 GNWSYDTLKVDNHLANLQGIEVIDGGDGTPAYNTIQGGSGNDELDFSGMTVKSFVIDGGA 1001
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + G D G D F GS D G+D Y
Sbjct: 1002 GNDTITGTSGNDTISGGAGSDTMSGGAGNDT-FLISNNDGSTDTFIGGDGTDTIMGNWSY 1060
Query: 427 ----ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ + + + + + ++ + +
Sbjct: 1061 DTLKVDNHLANLQGIEVIDGGDGTPAYNTIQGGSGNDELDFSG 1103
>gi|149699604|ref|XP_001494346.1| PREDICTED: similar to Matrix metalloproteinase-15 precursor
(MMP-15) (Membrane-type matrix metalloproteinase 2)
(MT-MMP 2) (MTMMP2) (Membrane-type-2 matrix
metalloproteinase) (MT2-MMP) (MT2MMP) (SMCP-2) [Equus
caballus]
Length = 652
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 48/162 (29%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + WS++ + + T + E R A W + L F+E
Sbjct: 108 LTGRKWSSHHLTFSIQNYTEKLGWYHSLE-------AVRRAFQVWEQATPLVFQEVPYED 160
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+ +
Sbjct: 161 IRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSST 220
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + + D +N
Sbjct: 221 DLHGNSLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTDN 262
>gi|293339906|ref|XP_001055465.2| PREDICTED: matrix metalloproteinase 25 [Rattus norvegicus]
Length = 615
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 62/195 (31%), Gaps = 51/195 (26%)
Query: 29 RYKPDVLTTHRLSFDITELNPNA---QEVARW----ALGEWSKVVDLTFEETSIHSD--- 78
V L++ I + ++ Q V R AL W+ LTF+E
Sbjct: 163 TLSGSVWKKRTLTWSIQSFSQSSRLSQSVVRTLVSYALDVWAVASGLTFQEVDSQYQEPD 222
Query: 79 --IKFI-------------SSNNGYVCTPRYDSRYFMEINFDKADVWRYG--IGKGTILS 121
I F + P + +FD + W +G G+GT L
Sbjct: 223 IVIHFSRAYHQDSYPFDGPGGTLAHAFFPGEHP-ISGDTHFDDEETWTFGSTDGEGTDLF 281
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A+HE GHALGL H S S+M F ++
Sbjct: 282 AVAVHEFGHALGLGHS-------------------SAPDSIMRPFYQGPVGDPGTYRLSQ 322
Query: 182 TPMVSDIVAVQKIYG 196
D +Q++YG
Sbjct: 323 ----DDRDGLQQLYG 333
>gi|157130901|ref|XP_001662054.1| matrix metalloproteinase [Aedes aegypti]
gi|108881896|gb|EAT46121.1| matrix metalloproteinase [Aedes aegypti]
Length = 492
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/232 (16%), Positives = 67/232 (28%), Gaps = 40/232 (17%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITEL-----NPNAQEVARWALGEWSKVVDLTFEETSI-HS 77
+ ++ + + L++ I Q + + A EWSKV +L F E +
Sbjct: 136 KSAKLKSGVRKWSKNVLTYTIENFPRGKRTAPIQAMLKKAFNEWSKVTNLDFVEVEDVDA 195
Query: 78 DIKFISS-----------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL 120
DI+ + P +I+F +
Sbjct: 196 DIEINFGGRLHKMRDSRCTFDDANTLAHAFFPEVG-----DIHFHNRYFFNDEDVTLEDF 250
Query: 121 SHNALHEIGHALGLMH-------PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
A+HEIGH+LGL H D +N + V +
Sbjct: 251 LDTAMHEIGHSLGLEHSRSKASLMHPTESNRFNEPQPIDVKNIQQMYGVRRGGRSMSNEA 310
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
+ D A+Q+ G GN Y + ++ I + +
Sbjct: 311 P----KLCSLEKID-AAIQESDGNLYVFSGNFYYNVNEKRPVGRLISSKWPG 357
>gi|297269067|ref|XP_002799829.1| PREDICTED: interstitial collagenase [Macaca mulatta]
Length = 403
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 52/185 (28%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T + A WS V LTF + S +DI
Sbjct: 42 RWEQTHLTYRIENYTPDLP-------RAAVDQAIEKAFQLWSNVTPLTFTKVSEGQADIM 94
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 95 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLYRVAA 151
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE GH+LGL H + D D Y Q+ + T
Sbjct: 152 HEFGHSLGLAHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGGSQNPVQPTG---PQT 208
Query: 183 PMVSD 187
P V D
Sbjct: 209 PKVCD 213
>gi|26354416|dbj|BAC40836.1| unnamed protein product [Mus musculus]
Length = 473
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 59/185 (31%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 113 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 172
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 173 GDFNYFDGKGGTLAHAFYP--GPGIQGDTHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 229
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S + Y P DI +Q
Sbjct: 230 LQHSNNPK---------------SIMYPTYRYLNPST----------FRLSADDIRNIQS 264
Query: 194 IYGAP 198
+YGAP
Sbjct: 265 LYGAP 269
>gi|156977657|ref|YP_001448563.1| bifunctional hemolysin-adenylate cyclase [Vibrio harveyi ATCC
BAA-1116]
gi|156529251|gb|ABU74336.1| hypothetical protein VIBHAR_06445 [Vibrio harveyi ATCC BAA-1116]
Length = 860
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/322 (14%), Positives = 87/322 (27%), Gaps = 28/322 (8%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++ G + + + +++ +GND V + N+V GND G +G D
Sbjct: 93 GEGGDDTLEGGQGDDVLDGGAGNDTLNAGAGNDTVTAGAGNDVVAGGLGNDTLHGGTGND 152
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + D + R+ L
Sbjct: 153 QV--SGGEGDDHLTVAYSGSNTLDGGAGDDVLTVETPTSSGRYSSYYKTANNARNTLIGG 210
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A + L+ +G + YEF +G+D D +Y S D + G R +
Sbjct: 211 AGNDRLVGGLGAER-------YEFNRGDGQDTIRDRDVYGSSVDQIVFGEGIVRDELSLR 263
Query: 426 YITH------GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ G + + + + H+ +D + S+ +E R
Sbjct: 264 REGNHLVIMIGGPDSGDSITIEEGYVNSQHQIEEIVLSDGSTVSPQSLPILSSAEADELR 323
Query: 480 FVTF---------DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
F D LY DD D G +
Sbjct: 324 GGYFADVIDGREGDDRLYGEGGDDTLEGGQGDDVLD----GGAGNDTLNAGAGNDTVTAG 379
Query: 531 ASHEDLINAFADAPDLVQAGKD 552
A ++ + + G D
Sbjct: 380 AGNDVVAGGLGNDTLHGGTGND 401
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 53/172 (30%), Gaps = 9/172 (5%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++ G + + + +++ +GND V + N+V GND G +G D
Sbjct: 591 GEGGDDTLEGGQGDDVLDGGAGNDTLNAGAGNDTVTAGAGNDVVAGGLGNDTLHGGTGND 650
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + D + R+ L
Sbjct: 651 QV--SGGEGDDHLTVAYSGSNTLDGGAGDDVLTVETPTSSGRYSSYYKTANNARNTLIGG 708
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
A + L+ +G + YEF +G+D D +Y S D + G
Sbjct: 709 AGNDRLVGGLGAER-------YEFNRGDGQDTIRDRDVYGSSVDQIVFGEGI 753
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 46/373 (12%), Positives = 83/373 (22%), Gaps = 63/373 (16%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
F + + G T + D G G T+ + +
Sbjct: 78 FADVIDGREGDDRLYGEGGDDTLEGGQGDDVLDGGAGNDTLNAGAGNDTVTAGAGNDVVA 137
Query: 130 HALGLMHPGSYNGGYPVYGVDND------YENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
LG G V G + D Y + L + +S Y +
Sbjct: 138 GGLGNDTLHGGTGNDQVSGGEGDDHLTVAYSGSNTLDGGAGDDVLTVETPTSSGRYSSYY 197
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG----------------- 226
++ I GA L + + TI D
Sbjct: 198 KTANNARNTLIGGAGNDRLVGGLGAERYEFNRGDGQDTIRDRDVYGSSVDQIVFGEGIVR 257
Query: 227 --------GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV----------- 267
G+ L+ + + I + +S E+ + TV
Sbjct: 258 DELSLRREGNHLVIMIGGPDSGDSITIEEGYVNSQHQIEEIVLSDGSTVSPQSLPILSSA 317
Query: 268 -IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G DV+ G ++ + G+D +G G D + +
Sbjct: 318 EADELRGGYFADVIDGREGDDRLYGEGGDDTLEGGQGDD--VLDGGAGNDTLNAGAGNDT 375
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKH 385
V L + + G D +
Sbjct: 376 VTAGA-----------------GNDVVAGGLGNDTLHGGTGNDQVSGGEGDDHLTVAYSG 418
Query: 386 FYEFGLSEGRDIT 398
G D+
Sbjct: 419 SNTLDGGAGDDVL 431
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 46/373 (12%), Positives = 83/373 (22%), Gaps = 63/373 (16%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
F + + G T + D G G T+ + +
Sbjct: 327 FADVIDGREGDDRLYGEGGDDTLEGGQGDDVLDGGAGNDTLNAGAGNDTVTAGAGNDVVA 386
Query: 130 HALGLMHPGSYNGGYPVYGVDND------YENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
LG G V G + D Y + L + +S Y +
Sbjct: 387 GGLGNDTLHGGTGNDQVSGGEGDDHLTVAYSGSNTLDGGAGDDVLTVETPTSSGRYSSYY 446
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG----------------- 226
++ I GA L + + TI D
Sbjct: 447 KTANNARNTLIGGAGNDRLVGGLGAERYEFNRGDGQDTIRDRDVYGSSVDQIVFGEGIVR 506
Query: 227 --------GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV----------- 267
G+ L+ + + I + +S E+ + TV
Sbjct: 507 DELSLRREGNHLVIMIGGPDSGDSITIEEGYVNSQHQIEEIVLSDGSTVSPQSLPILSSA 566
Query: 268 -IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G DV+ G ++ + G+D +G G D + +
Sbjct: 567 EADELRGGYFADVIDGREGDDRLYGEGGDDTLEGGQGDD--VLDGGAGNDTLNAGAGNDT 624
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKH 385
V L + + G D +
Sbjct: 625 VTAGA-----------------GNDVVAGGLGNDTLHGGTGNDQVSGGEGDDHLTVAYSG 667
Query: 386 FYEFGLSEGRDIT 398
G D+
Sbjct: 668 SNTLDGGAGDDVL 680
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/320 (11%), Positives = 70/320 (21%), Gaps = 95/320 (29%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + + G+D L+ + G N T+ T
Sbjct: 344 GGDDTLEGGQGDDVLDGGAGNDTLNAGAGNDTVT----AGAGNDVVAGGLGNDTLHGGTG 399
Query: 268 IESVVGSSGNDVVI-----------------------------------GNSANNVFFES 292
+ V G G+D + N+A N
Sbjct: 400 NDQVSGGEGDDHLTVAYSGSNTLDGGAGDDVLTVETPTSSGRYSSYYKTANNARNTLIGG 459
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFE--------------------------NAII 326
+GND G G + + + I + N ++
Sbjct: 460 AGNDRLVGGLGAERYEFNRGDGQDTIRDRDVYGSSVDQIVFGEGIVRDELSLRREGNHLV 519
Query: 327 VYDANEHKQDFLS----------DVERLRFADQC---------------IDSVNVKQRSI 361
+ D ++ +E + +D + +
Sbjct: 520 IMIGGPDSGDSITIEEGYVNSQHQIEEIVLSDGSTVSPQSLPILSSAEADELRGGYFADV 579
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----FDSYLYLGSYDDLRNVFG 416
++ + L G D E + G D D+ D + G
Sbjct: 580 IDGREGDDRLYGEGGDDTLEGGQGDDVLDGGAGNDTLNAGAGNDTVTAGAGNDVVAGGLG 639
Query: 417 SDRGAAARHYITHGVKEGRN 436
+D EG +
Sbjct: 640 NDTLHGGTGNDQVSGGEGDD 659
Score = 46.7 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 40/168 (23%), Gaps = 39/168 (23%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ + + G+D L+ + G N T+ T
Sbjct: 593 GGDDTLEGGQGDDVLDGGAGNDTLNAGAGNDTVT----AGAGNDVVAGGLGNDTLHGGTG 648
Query: 268 IESVVGSSGNDVVI-----------------------------------GNSANNVFFES 292
+ V G G+D + N+A N
Sbjct: 649 NDQVSGGEGDDHLTVAYSGSNTLDGGAGDDVLTVETPTSSGRYSSYYKTANNARNTLIGG 708
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+GND G G + + + I + D + + D
Sbjct: 709 AGNDRLVGGLGAERYEFNRGDGQDTIRDRDVYGSSVDQIVFGEGIVRD 756
>gi|109128713|ref|XP_001101050.1| PREDICTED: matrix metalloproteinase-15 [Macaca mulatta]
Length = 669
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 48/162 (29%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + W+N+ + + T + E R A W + L F+E
Sbjct: 134 LTGRKWNNHHLTFSIQNYTEKLGWYHS-------MEAVRRAFRVWEQATPLVFQEVPYED 186
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+ +
Sbjct: 187 IRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSST 246
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + N + D +N
Sbjct: 247 DLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDN 288
>gi|62898123|dbj|BAD97001.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
Length = 469
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 53/185 (28%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 108 RWEQTHLTYRIENYTPDLPRADVD-------HAIEKAFQLWSNVTPLTFTKVSEGQADIM 160
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 161 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLHRVAA 217
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 218 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIG---PQT 274
Query: 183 PMVSD 187
P D
Sbjct: 275 PKACD 279
>gi|54697154|gb|AAV38949.1| matrix metalloproteinase 1 (interstitial collagenase) [Homo
sapiens]
gi|61357929|gb|AAX41472.1| matrix metalloproteinase 1 [synthetic construct]
Length = 469
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 53/185 (28%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 108 RWEQTHLTYRIENYTPDLPRADVD-------HAIEKAFQLWSNVTPLTFTKVSEGQADIM 160
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 161 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLHRVAA 217
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 218 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIG---PQT 274
Query: 183 PMVSD 187
P D
Sbjct: 275 PKACD 279
>gi|1705981|sp|Q10738|MMP7_MOUSE RecName: Full=Matrilysin; AltName: Full=Matrin; AltName:
Full=Matrix metalloproteinase-7; Short=MMP-7; AltName:
Full=Pump-1 protease; AltName: Full=Uterine
metalloproteinase; Flags: Precursor
gi|548182|gb|AAA99984.1| matrilysin [Mus musculus]
gi|148692994|gb|EDL24941.1| matrix metallopeptidase 7 [Mus musculus]
Length = 264
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/215 (20%), Positives = 69/215 (32%), Gaps = 52/215 (24%)
Query: 4 IKPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGE 61
KP +A++ L W + + Y+ T+ + ++ + AL
Sbjct: 83 QKPRCGVPDVAEYSLMPNSPKWHSRIVTYRIVSYTSDLPRIVVD-------QIVKKALRM 135
Query: 62 WSKVVDLTFEETS-IHSDIKFIS---------------SNNGYVCTPRYDSRYFMEINFD 105
WS + L F+ S +DI + G+ P + +FD
Sbjct: 136 WSMQIPLNFKRVSWGTADIIIGFARRDHGDSFPFDGPGNTLGHAFAP--GPGLGGDAHFD 193
Query: 106 KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
K + W G G A HE GH+LGL H S +VM
Sbjct: 194 KDEYWTDGEDAGVNFLFAATHEFGHSLGLSHS-------------------SVPGTVMY- 233
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
D S + T DI +QK+YG
Sbjct: 234 ---PTYQRDYSEDFSLTK--DDIAGIQKLYGKRNT 263
>gi|32035699|ref|ZP_00135587.1| COG2931: RTX toxins and related Ca2+-binding proteins
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|190150277|ref|YP_001968802.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|303253548|ref|ZP_07339686.1| hemolysin A [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307245862|ref|ZP_07527947.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307247948|ref|ZP_07529981.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307250204|ref|ZP_07532160.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|307254835|ref|ZP_07536661.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307259277|ref|ZP_07541006.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307263619|ref|ZP_07545231.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|123196|sp|P15377|RTX2A_ACTPL RecName: Full=RTX-II toxin determinant A; AltName: Full=APX-IIA;
AltName: Full=Cytolysin IIA; Short=CLY-IIA; AltName:
Full=Hemolysin IIA; Short=HLY-IIA
gi|38941|emb|CAA43423.1| ClyII-A protein (cytolysin II) [Actinobacillus pleuropneumoniae]
gi|141825|gb|AAA87232.1| hemolysin A [Actinobacillus pleuropneumoniae serovar 5]
gi|189915408|gb|ACE61660.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|302647468|gb|EFL77686.1| hemolysin A [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306853222|gb|EFM85442.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306855552|gb|EFM87722.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306857733|gb|EFM89833.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306862206|gb|EFM94174.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306866644|gb|EFM98503.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306871042|gb|EFN02774.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 956
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 9/234 (3%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFM--PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G +D +D S Y + Y V D A+ + +
Sbjct: 624 GSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHETIATHQT 683
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++GN KIE +++D F + ++ + N I ++ G
Sbjct: 684 NVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQF-NDIFKGSQFDDVFHGGNGVD 742
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + + + G +G+DV+ G + NN +GND+ G D + + I
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 321 FENAIIVYDANEHKQDFL-----SDVERLRFADQCIDSVN-VKQRSILEYTASY 368
+ ++ + +D S +E + + + N + + A+Y
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRIGNWFLEDDLASTVANY 856
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 61/212 (28%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT----ESWS------------- 251
I G D + + ID S+S
Sbjct: 617 GNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHE 676
Query: 252 SIGGYEKNMT--------------------------------------IAQHTVIESVV- 272
+I ++ N+ I + + + V
Sbjct: 677 TIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQFNDIFKGSQFDDVFH 736
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G D + GN ++ F +G+DV DG +G + F + I ++ I
Sbjct: 737 GGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNN--FLVGGTGNDIISGGKDNDIYVHKTG 794
Query: 333 HKQDFLSDV---ERLRFADQCIDSVNVKQRSI 361
D ++D ++L F+D + + K+
Sbjct: 795 DGNDSITDSGGQDKLAFSDVNLKDLTFKKVDS 826
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 54/219 (24%), Gaps = 48/219 (21%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG---------- 303
N+ ++ T I +GND V S+ V G+D S G
Sbjct: 596 FDDAGNIIESKDTKI-IANLGAGNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDAT 654
Query: 304 --------------LDTFFYYAPSYLYKIYRFENAIIVYDANEHK--------QDFLSDV 341
D+ + ++ + E D L V
Sbjct: 655 AETEKGSYSVKRYVGDSKALHETIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSV 714
Query: 342 ERL---RFAD------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
E + +F D ++ + L G DV +
Sbjct: 715 EEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGG 774
Query: 393 EGRDIT---FDSYLY---LGSYDDLRNVFGSDRGAAARH 425
G DI D+ +Y G +D G A
Sbjct: 775 TGNDIISGGKDNDIYVHKTGDGNDSITDSGGQDKLAFSD 813
>gi|170742128|ref|YP_001770783.1| hypothetical protein M446_3984 [Methylobacterium sp. 4-46]
gi|168196402|gb|ACA18349.1| hypothetical protein M446_3984 [Methylobacterium sp. 4-46]
Length = 644
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 13/88 (14%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYD 577
+ F Y + D+ + DHF N G++EGR + F+ YL +
Sbjct: 16 SIGGFDQTYYRLKNPDVAAS-GVDLL------DHFLNHGWKEGRDPSRHFSVSGYLQANP 68
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRAL 605
D+ H+ G+ EGR+
Sbjct: 69 DVAAA----NINPLVHFWAFGLAEGRSG 92
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAF 540
FD Y D+ H++ HG KEGR+P F Y+ ++ D+ A
Sbjct: 19 GFDQTYYRLKNPDVAASG----VDLLDHFLNHGWKEGRDPSRHFSVSGYLQANPDVAAAN 74
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRS 564
P + HF FG EGRS
Sbjct: 75 -INPLV------HFWAFGLAEGRS 91
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 43/135 (31%), Gaps = 22/135 (16%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 457
FD Y D+ H++ HG KEGR+P F Y+ ++ D+ A
Sbjct: 20 FDQTYYRLKNPDVAAS----GVDLLDHFLNHGWKEGRDPSRHFSVSGYLQANPDVAAANI 75
Query: 458 DAPDLVQVGKDHFSNFGCEEGR--------FVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ HF FG EGR F Y + + + G +
Sbjct: 76 NP-------LVHFWAFGLAEGRSGWQVAEAATAFQEGRYKDALSASNRIAETSPGLPGAY 128
Query: 510 YITHGVKEGRNPDAF 524
Y G G F
Sbjct: 129 Y--WGSLAGIYDGDF 141
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 42/135 (31%), Gaps = 14/135 (10%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLG 406
+ ++ Y D + G D+ HF G EGRD + F YL
Sbjct: 10 RSGVIASIGGFDQTYYRLKNPD-VAASGVDLL---DHFLNHGWKEGRDPSRHFSVSGYLQ 65
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNP---DAFKALEYIASHEDLINAFADAPDLV 463
+ D+ H+ G+ EGR+ ++D ++A +
Sbjct: 66 ANPDVAAAN----INPLVHFWAFGLAEGRSGWQVAEAATAFQEGRYKDALSAS-NRIAET 120
Query: 464 QVGKDHFSNFGCEEG 478
G +G G
Sbjct: 121 SPGLPGAYYWGSLAG 135
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 36/103 (34%), Gaps = 20/103 (19%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYD 493
+ F Y + D+ + D DHF N G +EGR + F YL +
Sbjct: 16 SIGGFDQTYYRLKNPDVAASGVD-------LLDHFLNHGWKEGRDPSRHFSVSGYLQANP 68
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNP-------DAFKALEY 529
D+ H+ G+ EGR+ AF+ Y
Sbjct: 69 DVAAA----NINPLVHFWAFGLAEGRSGWQVAEAATAFQEGRY 107
Score = 39.0 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 8/64 (12%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKA 626
F+ Y D+ + H++ HG KEGR + SV + + D A
Sbjct: 20 FDQTYYRLKNPDV----AASGVDLLDHFLNHGWKEGR----DPSRHFSVSGYLQANPDVA 71
Query: 627 DLSL 630
++
Sbjct: 72 AANI 75
>gi|56681800|gb|AAW21436.1| leukotoxin A [Pasteurellaceae bacterium I47]
Length = 377
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 73/228 (32%), Gaps = 22/228 (9%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
G G + + EI G G Y +D E + +V +
Sbjct: 115 NLGAGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEKGSYTVN--RFVET 172
Query: 171 SMMDASFGYCATPMVSDIVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
T +V + ++ +G K +G Y + K ++ I + +D
Sbjct: 173 GKALHEVISTHTALVGNREEKIEYRHGNNKQHVG---YYTKDTLKA---VEEIIGTSHND 226
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + + G + TI + + + G G+D++ G + ++
Sbjct: 227 IFKGSKF-------------DDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFI 273
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
GND+ G G D F + I E + ++ + +D
Sbjct: 274 DGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDL 321
Score = 43.6 bits (101), Expect = 0.097, Method: Composition-based stats.
Identities = 31/223 (13%), Positives = 52/223 (23%), Gaps = 49/223 (21%)
Query: 269 ESVVGSSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE----- 322
E+V+ + ++ + ++ F SG DG G D Y +Y
Sbjct: 102 ENVIKTKETKIIANLGAGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEK 161
Query: 323 NAIIVYDANEHKQ------------------------------------DFLSDVERLRF 346
+ V E + D L VE +
Sbjct: 162 GSYTVNRFVETGKALHEVISTHTALVGNREEKIEYRHGNNKQHVGYYTKDTLKAVEEIIG 221
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
K + + G D K G D ++ G
Sbjct: 222 TSHNDIFKGSKFDDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGG 276
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+DL + D H G + L + S+
Sbjct: 277 KGNDLLHGGKGDDI--FVHRQGDGNDSITESEGNDKLSFSDSN 317
>gi|180665|gb|AAA35699.1| skin collagenase precursor [Homo sapiens]
Length = 469
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 54/185 (29%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W +RY+ + T D+ A WS V LTF + S +DI
Sbjct: 108 RWEQTHLRYRIENYTPDLPRADVD-------HAIEKAFQLWSNVTPLTFTKVSEGQADIM 160
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 161 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLHRVAA 217
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 218 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIG---PQT 274
Query: 183 PMVSD 187
P D
Sbjct: 275 PKACD 279
>gi|126352554|ref|NP_001075316.1| interstitial collagenase precursor [Equus caballus]
gi|8469206|sp|Q9XSZ5|MMP1_HORSE RecName: Full=Interstitial collagenase; AltName: Full=Matrix
metalloproteinase-1; Short=MMP-1; Flags: Precursor
gi|5020116|gb|AAD38030.1|AF148882_1 matrix metalloproteinase 1 precursor [Equus caballus]
Length = 469
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 59/185 (31%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W N + Y+ + T D+ + A WS V LTF + S +DI
Sbjct: 108 RWENTHLTYRIENYTPDLPRADVD-------QAIEKAFQLWSNVSPLTFTKVSEGQADIM 160
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P R + +FD+ + W + L A
Sbjct: 161 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPRIGGDAHFDEDETWTSNF-RNYNLYRVAA 217
Query: 126 HEIGHALGLMHPGS-YNGGYPVYGVDNDYEN--DSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE GH+LGL H YP Y D + D Y Q+ + T
Sbjct: 218 HEFGHSLGLSHSTDIGALMYPNYFFTGDVQLSQDDINGIQAIYGPSQNPIQPIG---PQT 274
Query: 183 PMVSD 187
P V D
Sbjct: 275 PEVCD 279
>gi|254440851|ref|ZP_05054344.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
gi|198250929|gb|EDY75244.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
Length = 1260
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/495 (11%), Positives = 105/495 (21%), Gaps = 29/495 (5%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+T S +I + N G + D G I
Sbjct: 45 ITIVGGSSSQNIALVIGN-GVSGLVLSGEALINVTDSSGDDTVSGNAGDNVITVTGGSDV 103
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ G S +V + ++ T D
Sbjct: 104 VNGGSGEDRLVVDYSATTAAVTGTTTTIGSDKGTVTVTGSSIEHYTVSTGSGIDTLTFLD 163
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG---------GDDLLDLTLIGG 238
G G+ S I +G G + + + G
Sbjct: 164 -GDNVIDAGTTGGNTITVGSGNNTIISGSGIDGIIVGNGDNYIDAGTIGANTITVGPTGS 222
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
N I + I G N A ++ SGN+ +I S + +GN+
Sbjct: 223 GNNTIISGSGIDGIIAGNGDNYIDAGTIGANTITAGSGNNTIISGSGIDGITVGTGNNYI 282
Query: 299 DGSSGLDTFFYY-APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+G G +T I + N
Sbjct: 283 EGGDGANTITAGPTGFGNNTILSGSGIDTISVGNGDNCIDA-------GTGGANTITAGS 335
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ + + + G + +S + + G + N
Sbjct: 336 GNNTIISGSGIDGFTVGDGDNYIDSGEGANTIAVGHGNNTILSGSGIDTITAGNGNNNIE 395
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
A G + + + A ++ + +A G D
Sbjct: 396 GGEGANAITTGTGNDVVSSGISADTIVTGAGNDIVKDAGGAGAVAAGAGHDRLVMD-FST 454
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
++ S+ + G+ +IT G L + L
Sbjct: 455 ATTAVTNTVTGADSHGGVL--GGTTYTGVEEFHITTG-------SGNDTLLGGDGADVLD 505
Query: 538 NAFADAPDLVQAGKD 552
G D
Sbjct: 506 GGAGADSLSAGGGSD 520
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/391 (13%), Positives = 96/391 (24%), Gaps = 68/391 (17%)
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
I + T S I+ D G G + + +G G+
Sbjct: 166 NVIDAGTTGGNTITVGSGNNTIISGSGIDGIIVGNG-DNYIDAGTIGANTITVGPTGSGN 224
Query: 140 YN-------GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G DN + + + ++ ++++ S T + ++
Sbjct: 225 NTIISGSGIDGIIAGNGDNYIDAGTIGANTITAGSGNNTIISGSGIDGITVGTGN-NYIE 283
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
GA + G + TI G D + + G N ID T ++
Sbjct: 284 GGDGANTITAGPTGFGNN----------TILSGSGIDTISV---GNGDNCIDAGTGGANT 330
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----- 307
I N TI + I+ G++ + N GN+ SG+DT
Sbjct: 331 ITAGSGNNTIISGSGIDGFTVGDGDNYIDSGEGANTIAVGHGNNTILSGSGIDTITAGNG 390
Query: 308 --------------------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ I IV DA
Sbjct: 391 NNNIEGGEGANAITTGTGNDVVSSGISADTIVTGAGNDIVKDAGGAGAVAAGAGHDRLVM 450
Query: 348 D-------------QCIDSVNVKQRSILEY--------TASYEDLIQVIGQDVFESMKHF 386
D V + + + L+ G DV +
Sbjct: 451 DFSTATTAVTNTVTGADSHGGVLGGTTYTGVEEFHITTGSGNDTLLGGDGADVLDGGAGA 510
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
G D+ + + ++ + F
Sbjct: 511 DSLSAGGGSDVIYGGIGDVVDGGEVGSDFDV 541
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/342 (10%), Positives = 97/342 (28%), Gaps = 29/342 (8%)
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT 221
++ +++ S ++ + V+ + G ++ ++ + +
Sbjct: 37 TVTVTKNYITIVGGSSSQNIALVIGNGVSGLVLSGEALINVTDS--SGDDTVSGNAGDNV 94
Query: 222 IYDSGGDDLLD---------------LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
I +GG D+++ + G I + + + G ++ T++ +
Sbjct: 95 ITVTGGSDVVNGGSGEDRLVVDYSATTAAVTGTTTTIGSDKGTVTVTGSSIEHYTVSTGS 154
Query: 267 VIESVVGSSGNDVV-IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
I+++ G++V+ G + N SGN+ SG+D Y A
Sbjct: 155 GIDTLTFLDGDNVIDAGTTGGNTITVGSGNNTIISGSGIDGIIV-GNGDNYIDAGTIGAN 213
Query: 326 IVYDANEHKQ----DFLSDVERLRFADQCI-DSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ S ++ + + + + + +I G D
Sbjct: 214 TITVGPTGSGNNTIISGSGIDGIIAGNGDNYIDAGTIGANTITAGSGNNTIISGSGIDGI 273
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+G + G+ + + G D +
Sbjct: 274 TVGTGNNYIEGGDGANTITAGPTGFGNN-TILSGSGIDTISV----GNGDNCIDAGTGGA 328
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ + + +I+ V G ++ + V
Sbjct: 329 NTITAGSGNNTIISGSGIDGFTVGDGDNYIDSGEGANTIAVG 370
Score = 44.8 bits (104), Expect = 0.048, Method: Composition-based stats.
Identities = 44/309 (14%), Positives = 86/309 (27%), Gaps = 38/309 (12%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + +S + G + ++ A+ G G TI+S + + G
Sbjct: 296 TGFGNNTILSGS-GIDTISVGNGDNCIDAGTGGANTITAGSGNNTIISGSGIDGFTVGDG 354
Query: 134 LM--HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G V +N + S + ++ + + T +D+V+
Sbjct: 355 DNYIDSGEGANTIAVGHGNNTILSGSGIDTITAGNGNNNIEGGEGANAITTGTGNDVVSS 414
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
GN+I KD+ + G D L + + T + S
Sbjct: 415 GISADTIVTGAGNDI------VKDAGGAGAVAAGAGHDRLVMDFSTATTAVTNTVTGADS 468
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G T + SGND ++G +V +G D G D +
Sbjct: 469 HGGVLGG--TTYTGVEEFHITTGSGNDTLLGGDGADVLDGGAGADSLSAGGGSDVIYGGI 526
Query: 312 PSYLYKIYRFENAIIVY---------------------------DANEHKQDFLSDVERL 344
+ + ++ D NE + +E +
Sbjct: 527 GDVVDGGEVGSDFDVLVLKDFGDHRIDLDNLLDPESGTVVQLDDDGNETGSVAFTGIESI 586
Query: 345 RFADQCIDS 353
F D + +
Sbjct: 587 EFVDNTVTT 595
>gi|157278503|ref|NP_001098353.1| membrane-type matrix metalloproteinase [Oryzias latipes]
gi|46359589|dbj|BAD15297.1| membrane-type matrix metalloproteinase [Oryzias latipes]
Length = 658
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 43/146 (29%), Gaps = 31/146 (21%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L W+ + Y T ++ E R A W +V LTF+E
Sbjct: 118 LTGHKWTKSHLTYSIQNYTPKIGEYESFE-------AIRRAFKVWERVTPLTFDEIPYQE 170
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+
Sbjct: 171 IKYGRRKEPDIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGMGGDTHFDSDEPWTIGNQ 230
Query: 114 IGKGTILSHNALHEIGHALGLMHPGS 139
+G L A+HE+GHALGL H +
Sbjct: 231 NVQGNDLFLVAVHELGHALGLEHSNN 256
>gi|113478027|ref|YP_724088.1| allergen V5/Tpx-1-like protein [Trichodesmium erythraeum IMS101]
gi|110169075|gb|ABG53615.1| Allergen V5/Tpx-1 related [Trichodesmium erythraeum IMS101]
Length = 833
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 64/287 (22%), Gaps = 22/287 (7%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ +++ G S + + + ++ G D +G +G D +
Sbjct: 442 SGDDNLTGDSTANNIKALAGDDTVSGGDGQDTINGGAGDD--VLNGEVDNDSLMGSTGND 499
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ + D L L + + L D
Sbjct: 500 QLNGGS--GNDTLKG---------------GNGIDTLNGGDNDDTLKGGKDADQLNGDAG 542
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
+ G D + + E L
Sbjct: 543 NDQLYGQPGNDQLNGGSGSDTLNGGNGIDTLNGGDNDDILKGGNDADELNGDAGNDQLYG 602
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
++ L G D + ++ D+ G + G+
Sbjct: 603 QPGNDQLNGGSGHDILEGGNGIDTLNGGDNDDILKGGNDADELNGGNGNDTLNGGNGIDT 662
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+K G++ AL A +++L + G D
Sbjct: 663 LNGGDNDDTLKGGKDA---DALNGDAGNDELYGQLGNDVLTGGTGND 706
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 46/332 (13%), Positives = 84/332 (25%), Gaps = 34/332 (10%)
Query: 72 ETSIHSDIKFISSNNGYV-------CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
D + T DV + +++
Sbjct: 438 NVPTSGDDNLTGDSTANNIKALAGDDTVSGGDGQDTINGGAGDDVLNGEVDNDSLMGSTG 497
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
++ G NG + G DND D+ + + D+ D +G
Sbjct: 498 NDQLNGGSGNDTLKGGNGIDTLNGGDND---DTLKGGKDADQLNGDAGNDQLYGQPGNDQ 554
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
++ G+ + GN I + D GG+D +L G
Sbjct: 555 LNGGS------GSDTLNGGNGIDTLNGGDNDDIL------KGGNDADELNGDAGNDQL-- 600
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ G + + I+++ G +D++ G + + +GND +G +G+
Sbjct: 601 YGQPGNDQLNGGSGHDILEGGNGIDTLNGGDNDDILKGGNDADELNGGNGNDTLNGGNGI 660
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT + D L IL+
Sbjct: 661 DTL----NGGDNDDTLKGGKDADALNGDAGNDELYG------QLGNDVLTGGTGNDILKG 710
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ LI V G D
Sbjct: 711 GKGADTLIGVDLTATQPGNSEIDILHGGSGAD 742
>gi|4505215|ref|NP_002412.1| interstitial collagenase isoform 1 preproprotein [Homo sapiens]
gi|116852|sp|P03956|MMP1_HUMAN RecName: Full=Interstitial collagenase; AltName: Full=Fibroblast
collagenase; AltName: Full=Matrix metalloproteinase-1;
Short=MMP-1; Contains: RecName: Full=22 kDa interstitial
collagenase; Contains: RecName: Full=27 kDa interstitial
collagenase; Flags: Precursor
gi|30126|emb|CAA38691.1| type I interstitial collagenase [Homo sapiens]
gi|1688258|gb|AAB36941.1| collagenase [Homo sapiens]
gi|15530201|gb|AAH13875.1| Matrix metallopeptidase 1 (interstitial collagenase) [Homo sapiens]
gi|30582587|gb|AAP35520.1| matrix metalloproteinase 1 (interstitial collagenase) [Homo
sapiens]
gi|54112080|gb|AAV28732.1| matrix metalloproteinase 1 (interstitial collagenase) [Homo
sapiens]
gi|60818387|gb|AAX36462.1| matrix metalloproteinase 1 [synthetic construct]
gi|61362913|gb|AAX42300.1| matrix metalloproteinase 1 [synthetic construct]
gi|61362918|gb|AAX42301.1| matrix metalloproteinase 1 [synthetic construct]
gi|119587435|gb|EAW67031.1| matrix metallopeptidase 1 (interstitial collagenase) [Homo sapiens]
gi|123979652|gb|ABM81655.1| matrix metallopeptidase 1 (interstitial collagenase) [synthetic
construct]
gi|123994457|gb|ABM84830.1| matrix metallopeptidase 1 (interstitial collagenase) [synthetic
construct]
gi|208965212|dbj|BAG72620.1| matrix metallopeptidase 1 [synthetic construct]
Length = 469
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 53/185 (28%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 108 RWEQTHLTYRIENYTPDLPRADVD-------HAIEKAFQLWSNVTPLTFTKVSEGQADIM 160
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 161 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLHRVAA 217
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 218 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIG---PQT 274
Query: 183 PMVSD 187
P D
Sbjct: 275 PKACD 279
>gi|254486063|ref|ZP_05099268.1| hemolysin-type calcium-binding protein [Roseobacter sp. GAI101]
gi|214042932|gb|EEB83570.1| hemolysin-type calcium-binding protein [Roseobacter sp. GAI101]
Length = 618
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/359 (14%), Positives = 95/359 (26%), Gaps = 23/359 (6%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
D + T R D GI + + I + G
Sbjct: 15 DDGRDFVDGGAGNDTIRTGDDADTIFGGTGDDSINAGIDDDVVSGGDGNDSIIGSHGSDT 74
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP-QDSMMDASFGYCATPMVSDIVAVQKIY 195
+G ++G V+ P ++ D G ++ I+
Sbjct: 75 LKGDDGNDTIWGGFGPEGIAGVTDEVIDATDPQPNNGKDLIEGGAGDDVLYGEDDDDTIF 134
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + + + TI GDD + + ++ ID + S G
Sbjct: 135 GGAD-NDYIDGGIDDDSLDGGMGNDTILGGQGDDTI---IGAQGEDEIDGGDGNDSIFAG 190
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------- 308
N ++ +++ G G+D + G ++ GND G G DT F
Sbjct: 191 -NDNDSVQGGAGNDTIDGGQGDDTIDGGDGDDSIAGGFGNDSILGGDGNDTIFAAGDNDT 249
Query: 309 ---------YYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQ 358
++ E + ++ D + L D
Sbjct: 250 VDGGDGDDSISGVRGNDSLFGGEGNDTIDGGEDNDTVDGGIGNDSLLGGFGDDDLTGGDG 309
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
++ + + + G D F G D S D+ ++ GS
Sbjct: 310 DDTIQGGGNNDTIRGGAGNDSMRGDDGEDTFLDVNGGDTIDGGSGSDPSDYDVIDLTGS 368
Score = 38.2 bits (87), Expect = 4.6, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 63/291 (21%), Gaps = 33/291 (11%)
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDA----- 330
+ + +GND DT F A + + + +
Sbjct: 15 DDGRDFVDGGAGNDTIRTGDDADTIFGGTGDDSINAGIDDDVVSGGDGNDSIIGSHGSDT 74
Query: 331 --NEHKQDFLSDVERLRFADQCIDSVN-------VKQRSILEYTASYEDLIQVIGQDVFE 381
+ D + D V + ++E A + L D
Sbjct: 75 LKGDDGNDTIWGGFGPEGIAGVTDEVIDATDPQPNNGKDLIEGGAGDDVLYGEDDDDTIF 134
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
I DS D + G D G E D
Sbjct: 135 GGADNDYIDG----GIDDDSLDGGMGNDTILGGQGDDTI-----IGAQGEDEIDGGDGND 185
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
++ ++ + + G D ++ F + LG D + +
Sbjct: 186 SIFAGNDNDSVQGGAGNDTIDGGQGDDTIDGGDGDDSIAGGFGNDSILG--GDGNDTIFA 243
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G +L ++ + + G D
Sbjct: 244 AGDNDTVD-GGDGDDSISGVRGNDSLFGGEGNDTIDGGEDNDTVDGGIGND 293
Score = 37.8 bits (86), Expect = 5.9, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 37/154 (24%), Gaps = 6/154 (3%)
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
F D D + + +R D + + + G D
Sbjct: 7 FGTGDPNKDDGRDFVDGGAGNDTIRTGDDADTIFGGTGDDSINAGIDDDVVSGGDGNDSI 66
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+G D + G + + A +G K+ A
Sbjct: 67 IGSHGSDTLKGDDGNDTI-----WGGFGPEGIAGVTDEVIDATDPQPNNG-KDLIEGGAG 120
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
+ Y +D I AD + D + G
Sbjct: 121 DDVLYGEDDDDTIFGGADNDYIDGGIDDDSLDGG 154
>gi|325922993|ref|ZP_08184698.1| putative calcium-binding protein [Xanthomonas gardneri ATCC 19865]
gi|325546521|gb|EGD17670.1| putative calcium-binding protein [Xanthomonas gardneri ATCC 19865]
Length = 758
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 51/167 (30%), Gaps = 14/167 (8%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N T A + V G +GNDVV G + ++ GNDV +G G D F
Sbjct: 518 NGTFAGTVSDDLVWGGTGNDVVTGGAGADLIGGGYGNDVLNGGDGSDQLFGGMGDDSLDG 577
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT--ASYEDLIQVIG 376
+ ++ D LS +L A I G
Sbjct: 578 GDGNDLLL----GGDGNDSLSG------GSGTDRLDGGAGDDVLSVNPQARDSVFIGGTG 627
Query: 377 QDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
D + F +G D ++ Y G+ D + G +
Sbjct: 628 NDTLNGSWYSDTYVFNKGDGHDTVVETSSYSGAVDRVSFGSGINLDD 674
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/208 (12%), Positives = 64/208 (30%), Gaps = 14/208 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ ++ G+D++ GG + + G + + + +
Sbjct: 518 NGTFAGTVSDDLVWGGTGNDVVT----GGAGADLIGGGYGNDVLNGGDGSDQLFGGMGDD 573
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---------FYYAPSYLYKIYR 320
S+ G GND+++G N+ SG D DG +G D + + +
Sbjct: 574 SLDGGDGNDLLLGGDGNDSLSGGSGTDRLDGGAGDDVLSVNPQARDSVFIGGTGNDTLNG 633
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ D + + A D+ + + + + + + G
Sbjct: 634 SWYSDTYVFNKGDGHDTVVETSSYSGAVDRVSFGSGINLDDTVFTRSGNDLFVTLKGSQD 693
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGS 407
++ ++ S+ + F+ S
Sbjct: 694 QLAVASWFASDASQVEYLDFNDRSVAAS 721
>gi|294787631|ref|ZP_06752875.1| hemolysin-type calcium binding protein [Simonsiella muelleri ATCC
29453]
gi|294483924|gb|EFG31607.1| hemolysin-type calcium binding protein [Simonsiella muelleri ATCC
29453]
Length = 354
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 31/82 (37%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G N + +++ G GND + G S ++V + GND G G DT+
Sbjct: 171 GDDILDGGRGNDKLFGGIGNDTLYGGKGNDKLSGESGDDVLYGGQGNDELIGGIGNDTYI 230
Query: 309 YYAPSYLYKIYRFENAIIVYDA 330
+ +IY +
Sbjct: 231 FDLGHGKDQIYDSFGNDTLEFG 252
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 3/123 (2%)
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNMTIAQHTVIESVVGSS 275
P I D+ +++ TL G L + + G + + + + G
Sbjct: 129 PLTLNIADAAPSNIIGSTLYGKPFANDTLVGGINNDKLIGGIGDDILDGGRGNDKLFGGI 188
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + G N+ SG+DV G G D + Y +YD
Sbjct: 189 GNDTLYGGKGNDKLSGESGDDVLYGGQGNDELIGGIGNDTYIFDLGHGKDQIYD--SFGN 246
Query: 336 DFL 338
D L
Sbjct: 247 DTL 249
Score = 44.4 bits (103), Expect = 0.065, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 29/135 (21%), Gaps = 39/135 (28%)
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
AN+ ND G G D K++
Sbjct: 153 ANDTLVGGINNDKLIGGIGDDIL--DGGRGNDKLF------------------------- 185
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
L + L G DV + E G D +
Sbjct: 186 ----------GGIGNDTLYGGKGNDKLSGESGDDVLYGGQGNDELIGGIGNDTYIFDLGH 235
Query: 405 LGSYDDLRNVFGSDR 419
D + + FG+D
Sbjct: 236 G--KDQIYDSFGNDT 248
Score = 37.8 bits (86), Expect = 6.4, Method: Composition-based stats.
Identities = 12/109 (11%), Positives = 21/109 (19%), Gaps = 3/109 (2%)
Query: 325 IIVYDANEHKQDFLS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D L + ++L + L + L G D
Sbjct: 144 GSTLYGKPFANDTLVGGINNDKLIGGIGDDILDGGRGNDKLFGGIGNDTLYGGKGNDKLS 203
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+G D DL + + + G
Sbjct: 204 GESGDDVLYGGQGNDELIGGIGNDTYIFDLGHGKDQIYDSFGNDTLEFG 252
>gi|329848425|ref|ZP_08263453.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843488|gb|EGF93057.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 790
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 72/506 (14%), Positives = 125/506 (24%), Gaps = 28/506 (5%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + FI G +++ D GIG + I
Sbjct: 169 TGNGLTNFIFGQTGNNTLAGLGGDDYLD-GGTGNDSLVGGIGNDAYVIDAIGDTITELAA 227
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
Y G + + N + + D++++ + + +
Sbjct: 228 EGIDLVYAEISFTLGANLEILNLTGIGGTSGTGNDLDNVLEGNGSNNTLTGLGGNDQLTG 287
Query: 194 IYGAPK--GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
G G LGN+ Y + I + L G + L +
Sbjct: 288 GAGNDTLLGGLGNDTYVVADAGDVVTEISNQGTDEVRSTITYNLGGKQVENLTLLNGAAI 347
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N +A + + GSSGND + G N+ G D+ G G DT
Sbjct: 348 NGTGNTFNNVLAGNDSNNVLNGSSGNDTLSGFGGNDSLIGGVGADLMTGGLGDDTVVID- 406
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYED 370
L + + E L + +IL ++
Sbjct: 407 -DALDLVSETPGEGTDTVQSSLTWTLTDGFENLVLTGSAVIDGTGNGAANILTGNSANNV 465
Query: 371 LIQVIGQDVFESMKHFYEF--GLSEGRDITFDSYLYLGSYDDL--------RNVFGSDRG 420
L G D + + G D S Y + + + +
Sbjct: 466 LSGGTGDDSYYIQNTGDNVVEASNAGIDTIISSVTYSLAGRQVENLTLTGVAALNATGNS 525
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
A G L+ + LI + +V D +
Sbjct: 526 LANTLIGNDGANTLDGSGGHDRLDGGLGADSLIGGTGNDTYVVDNAGDVITEGAAAGTDL 585
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
V LG+ D + G+ G D L S+ L
Sbjct: 586 VESSLTYILGANLDQLTLTGALAI------------NGTGNDLNNILAGNGSNNILTGGL 633
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ +Q D+ G I
Sbjct: 634 GNDTYYIQNTGDNVVEAGGAGTDMIY 659
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 50/324 (15%), Positives = 80/324 (24%), Gaps = 28/324 (8%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------ 308
N + E+ + GND VIG + N GND DG +GLDT
Sbjct: 62 TGATNYGGESYVNFENAITGDGNDTVIGTAVANAITTGDGNDSLDGGAGLDTLVGGEGND 121
Query: 309 -YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTA 366
Y S + + + +VE + S + +
Sbjct: 122 TYIVESAGDVVTEQADDGEDRVNSTVSYTLGDNVENMYLQGSADLSGTGNGLTNFIFGQT 181
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
L + G D + G D +G G D A +
Sbjct: 182 GNNTLAGLGGDDYLDGGTGNDSLVGGIGNDAYVIDA--IGDTITELAAEGIDLVYAEISF 239
Query: 427 ITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
E N + D L ++ G D + +
Sbjct: 240 TLGANLEILNLTGIGGTSGTGNDLDNVLEGNGSNNTLTGLGGNDQLTGGAGNDTLLGGLG 299
Query: 485 SYLY-LGSYDDLRNVF---GSDRGAAARHYITHGVK------------EGRNPDAFKALE 528
+ Y + D+ G+D + Y G + G L
Sbjct: 300 NDTYVVADAGDVVTEISNQGTDEVRSTITYNLGGKQVENLTLLNGAAINGTGNTFNNVLA 359
Query: 529 YIASHEDLINAFADAPDLVQAGKD 552
S+ L + + G D
Sbjct: 360 GNDSNNVLNGSSGNDTLSGFGGND 383
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/343 (13%), Positives = 105/343 (30%), Gaps = 30/343 (8%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
TF +D + + + T I AD+ G+G T++ I
Sbjct: 353 TFNNVLAGNDSNNVLNGSSGNDTLSGFGGNDSLIGGVGADLMTGGLGDDTVV-------I 405
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
AL L+ G V D F V++ D + + +++
Sbjct: 406 DDALDLVSETPGEGTDTVQSSLTWTLTDGFENLVLTGSAVIDGTGNGAANILTGNSANNV 465
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+ G G++ Y I+ + + G D + ++ +
Sbjct: 466 L---------SGGTGDDSYYIQNTGDNVVEAS----NAGIDTIISSVTYSLAGRQ----- 507
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ + +++ +++G+ G + + G+ ++ G D G +G DT+
Sbjct: 508 VENLTLTGVAALNATGNSLANTLIGNDGANTLDGSGGHDRLDGGLGADSLIGGTGNDTYV 567
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-CIDSVNVKQRSILEYTAS 367
+ I A + +++++L I+ +IL S
Sbjct: 568 VD--NAGDVITEGAAAGTDLVESSLTYILGANLDQLTLTGALAINGTGNDLNNILAGNGS 625
Query: 368 YEDLIQVIGQDVFESMKHFYEF--GLSEGRDITFDSYLYLGSY 408
L +G D + G D+ + + Y +
Sbjct: 626 NNILTGGLGNDTYYIQNTGDNVVEAGGAGTDMIYSTVTYTLNG 668
>gi|119488097|ref|ZP_01621541.1| hypothetical protein L8106_11887 [Lyngbya sp. PCC 8106]
gi|119455386|gb|EAW36525.1| hypothetical protein L8106_11887 [Lyngbya sp. PCC 8106]
Length = 1102
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 55/163 (33%), Gaps = 6/163 (3%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N S S+ + I + E+++G+ ND+++ + +++ G+D+ DG G D
Sbjct: 894 NEVSGSTTVYDFGSDAIIGSSGDETLLGTDNNDLILAEAGDDLVAGLLGDDIIDGGEGDD 953
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
N I + + + + L + + +L
Sbjct: 954 VLRGDLNRRSPGGNIGGNDTINGGLGDDRIGGKAGNDALFGDEGDDEIFGDDGDDLLRGG 1013
Query: 366 ASYEDLIQVIGQDVFESMKHFYEF--GLSEGRDITFDSYLYLG 406
+ L D F + F + EG DI D + +
Sbjct: 1014 LGDDVLTG----DDFSGGQGADTFVLAIGEGTDIITDFEVGID 1052
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 58/196 (29%), Gaps = 35/196 (17%)
Query: 197 APKGSLGNNIYKIEVQ-QKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTE- 248
A + S +Y S +T+ + +DL+ DL + ID
Sbjct: 893 ANEVSGSTTVYDFGSDAIIGSSGDETLLGTDNNDLILAEAGDDLVAGLLGDDIIDGGEGD 952
Query: 249 -----------------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+I G + I +++ G G+D + G+ +++
Sbjct: 953 DVLRGDLNRRSPGGNIGGNDTINGGLGDDRIGGKAGNDALFGDEGDDEIFGDDGDDLLRG 1012
Query: 292 SSGNDVFDG-----SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
G+DV G G DTF I FE I E+L
Sbjct: 1013 GLGDDVLTGDDFSGGQGADTFVLAIGEGTDIITDFEVGIDFI-----GLTEGLSFEQLAL 1067
Query: 347 ADQCIDSVNVKQRSIL 362
Q +++ L
Sbjct: 1068 ETQGKNTLINFGEDTL 1083
Score = 41.7 bits (96), Expect = 0.45, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 31/129 (24%), Gaps = 6/129 (4%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT------FDSY 402
+ L T + + ++ G D+ + EG D+
Sbjct: 906 GSDAIIGSSGDETLLGTDNNDLILAEAGDDLVAGLLGDDIIDGGEGDDVLRGDLNRRSPG 965
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
+G D + G DR EG + + + +
Sbjct: 966 GNIGGNDTINGGLGDDRIGGKAGNDALFGDEGDDEIFGDDGDDLLRGGLGDDVLTGDDFS 1025
Query: 463 VQVGKDHFS 471
G D F
Sbjct: 1026 GGQGADTFV 1034
>gi|300864166|ref|ZP_07109058.1| hypothetical protein OSCI_660002 [Oscillatoria sp. PCC 6506]
gi|300337834|emb|CBN54204.1| hypothetical protein OSCI_660002 [Oscillatoria sp. PCC 6506]
Length = 454
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 7/106 (6%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L + + G +N + + ++++G +GND + GN ++ +GND G G+
Sbjct: 294 LAPSQANYLVGDAQNNSASAGGGDDTLIGGNGNDTLRGNQGDDTISGGNGNDFLYGGKGI 353
Query: 305 DTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
DT F + + A D + D E
Sbjct: 354 DTISGGEGADFISGDAGDDILIGGSGQDRFVLAPFAGIDTIVDFED 399
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 50/132 (37%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ GN + +QQ + + D + + G + + ++ G + +
Sbjct: 277 TSGNFSFSGLLQQIQVALAPSQANYLVGDAQNNSASAGGGDDTLIGGNGNDTLRGNQGDD 336
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI+ + + G G D + G + +G+D+ G SG D F + + I
Sbjct: 337 TISGGNGNDFLYGGKGIDTISGGEGADFISGDAGDDILIGGSGQDRFVLAPFAGIDTIVD 396
Query: 321 FENAIIVYDANE 332
FE++ + +
Sbjct: 397 FEDSEDIIVLSG 408
Score = 44.8 bits (104), Expect = 0.050, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 30/129 (23%), Gaps = 37/129 (28%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
I+ + S + ++G++ NN G+D G +G DT
Sbjct: 290 IQVALAPSQANYLVGDAQNNSASAGGGDDTLIGGNGNDT--------------------- 328
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
LR L + + G D
Sbjct: 329 ----------------LRGNQGDDTISGGNGNDFLYGGKGIDTISGGEGADFISGDAGDD 372
Query: 388 EFGLSEGRD 396
G+D
Sbjct: 373 ILIGGSGQD 381
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 28/123 (22%), Gaps = 4/123 (3%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L + + G D K EG D
Sbjct: 314 GGGDDTLIGGNGNDTLRGNQGDDTISGGNGNDFLYGGKGIDTISGGEGADFISGDAGD-- 371
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
D L G DR A + + + + L + L + L+ V
Sbjct: 372 --DILIGGSGQDRFVLAPFAGIDTIVDFEDSEDIIVLSGGFTFAQLKIIPGNNGPLITVA 429
Query: 467 KDH 469
K
Sbjct: 430 KSG 432
>gi|33862361|ref|NP_893921.1| protease [Prochlorococcus marinus str. MIT 9313]
gi|33640474|emb|CAE20263.1| possible protease [Prochlorococcus marinus str. MIT 9313]
Length = 356
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 62/161 (38%), Gaps = 23/161 (14%)
Query: 59 LGEWSKVVDLTFEETSIHSDIKFIS-------------SNNGYVCTPRYDSRYFMEINFD 105
L + S D+ F+ ++ + G R + EI +
Sbjct: 65 LAKISNAADVYFQRVYDSTNTDISFYYDTTIDLGDPSVTTFGVAVPNNNGGRQWTEIFLN 124
Query: 106 KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
++ + HE+GHALGL HP + G VY + + + +VMSY
Sbjct: 125 GPEIQAKSEDFSNYVF---NHELGHALGLEHPHDNSDGD-VYLSTDPQLSATPEETVMSY 180
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
+P+ S Y ++D A+++I+G+P+ N+
Sbjct: 181 RVPE------SGVYPTDFSINDYNALEQIWGSPQAQSTQNV 215
>gi|4388764|emb|CAA56234.1| hemolysin [Escherichia coli]
Length = 998
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 34/216 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYG 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKAINGVLSFNESND 889
Query: 370 D----LIQVIGQDVFESMKHFYE-FGLSEGRDITFD 400
+D + H E +GR+I D
Sbjct: 890 VNGITFKNWFAKDASGADNHLVEVITDKDGREIKVD 925
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 46/164 (28%), Gaps = 19/164 (11%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G I +E ++G +D G N++F + GND +G+ G D +
Sbjct: 685 FEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLY- 743
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + ++ + D LS D L+ +Y
Sbjct: 744 -GDDGDDYISGGQGDDQLFGGS--GNDKLSG------GDGNNYLTGGSGNDELQAHGAYN 794
Query: 370 DLIQVIGQDVFE---------SMKHFYEFGLSEGRDITFDSYLY 404
L G D + G DI Y
Sbjct: 795 ILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNY 838
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 55/197 (27%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKRVGNDLI 873
Score = 40.5 bits (93), Expect = 0.80, Method: Composition-based stats.
Identities = 34/236 (14%), Positives = 61/236 (25%), Gaps = 29/236 (12%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----AIIVYDANEHK------- 334
++V + +G+ G D Y + N +
Sbjct: 605 DDVVYSGAGSSEVFAGEGYDPVSYNKTDVGKLTIDATGAPKPGEYIVPKNMYGDVEVLQE 664
Query: 335 ------QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
E++++ D + +++ S E+LI D F+ K
Sbjct: 665 VVKEQEVSVGKRTEKIQYRDFEFRTGG-IPYDVIDNLHSVEELIGGKHDDEFKGGKFNDI 723
Query: 389 FGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRGAAARH-----YITHGVKEGRNPDA 439
F ++G D + LY DD + D G
Sbjct: 724 FHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSG 783
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYD 493
L+ ++ L D G D + F D Y+Y +Y
Sbjct: 784 NDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNYG 839
>gi|318604797|emb|CBY26295.1| putative hemolysin [Yersinia enterocolitica subsp. palearctica Y11]
Length = 483
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 53/169 (31%), Gaps = 24/169 (14%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
S + D G + +IGG N I + ++ G N I H +
Sbjct: 125 NTTPSKSALLTDNDDFIGHKYIRNKVIGGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFD 184
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+ G GND++IG N+ +GND+ DG G D + +
Sbjct: 185 SLFGQDGNDILIGGEGNDGLTGGAGNDILDGGDGNDQL------------HGDADGLASF 232
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A+E K +E + + L G D
Sbjct: 233 ASESSWR------------GNDIIFGGKGNDRIEGEKNNDYLAGGTGND 269
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 44/149 (29%), Gaps = 17/149 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G+D++ G + + G E N +
Sbjct: 155 GNNIIQGGDKSDNLAGGAGNDII----FGHASFDSLFGQDGNDILIGGEGNDGLTGGAGN 210
Query: 269 ESVVGSSGNDVVIGNS-------------ANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + G GND + G++ N++ F GND +G D +
Sbjct: 211 DILDGGDGNDQLHGDADGLASFASESSWRGNDIIFGGKGNDRIEGEKNNDYLAGGTGNDS 270
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERL 344
Y ++ ++ + + + +
Sbjct: 271 YIFSAYDGINMIVEYSNEENTISINDHFF 299
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 51/191 (26%), Gaps = 46/191 (24%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + I + V+G GN+++ G ++ +GND+ G + D+ F
Sbjct: 135 TDNDDFIGHKYIRNKVIGGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFDSLF------- 187
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
IL + L
Sbjct: 188 ---------------------------------------GQDGNDILIGGEGNDGLTGGA 208
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D+ + + +F S D + G+DR ++ G
Sbjct: 209 GNDILDGGDGNDQLHGDADGLASFASESSWRGNDIIFGGKGNDRIEGEKNNDYLAGGTGN 268
Query: 436 NPDAFKALEYI 446
+ F A + I
Sbjct: 269 DSYIFSAYDGI 279
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 5/126 (3%)
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
++ D+ + I+ AS++ L G D+ + G DI
Sbjct: 155 GNNIIQGGDKSDNLAGGAGNDIIFGHASFDSLFGQDGNDILIGGEGNDGLTGGAGNDIL- 213
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
G +D + + A G +E +++ L +
Sbjct: 214 ----DGGDGNDQLHGDADGLASFASESSWRGNDIIFGGKGNDRIEGEKNNDYLAGGTGND 269
Query: 460 PDLVQV 465
+
Sbjct: 270 SYIFSA 275
>gi|329851823|ref|ZP_08266504.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328839672|gb|EGF89245.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 702
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/325 (11%), Positives = 71/325 (21%), Gaps = 24/325 (7%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G N T +++ G+ GND + G ++ SGND G +G DT++
Sbjct: 35 VYTGGTGNDTYTGGNDNDTINGAGGNDSLSGGGGHDRLDGGSGNDTLVGGAGNDTYYTDV 94
Query: 312 PSYLYKIYRFENAI------------------IVYDANEHKQDFLSDVERLRFADQCIDS 353
+ E + +++ +
Sbjct: 95 IGDVIVELEGEGRDLVVSSRSFNMSGLLVEDVTLLGSSDFSVTGNGLSNVITGNSGYNAL 154
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ + + + G D + G D + +
Sbjct: 155 SGGAGHDTIYGGSGRDTITGGDGNDSLDGGGSRDSMTGGAGNDTYVVDDSSDRVVELIGQ 214
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ A + + G D
Sbjct: 215 GHDQVYTTITTSLAAYVEDLTLLGTGGIDGSGNAENNVVTGNSGSNRLFGHGGNDSLDGD 274
Query: 474 GCEEGRFVTFDSYLYLGSYD--DLRNVFGSDRGAA----ARHYITHGVKEGRNPDAFKAL 527
++ + LG L+ G+D + Y G L
Sbjct: 275 AGDDRLDGGDGNDTLLGGAGSDSLQGYAGTDSVSGGDGNDSLYGYTGDDTLLGEGGNDYL 334
Query: 528 EYIASHEDLINAFADAPDLVQAGKD 552
A ++ L + G D
Sbjct: 335 YGDAGNDTLTGDAGNDTLFAGGGLD 359
Score = 45.5 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 47/347 (13%), Positives = 95/347 (27%), Gaps = 46/347 (13%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D T + I EL +++ + + L E+ ++ F + NG
Sbjct: 88 DTYYTDVIGDVIVELEGEGRDLVVSSRSF--NMSGLLVEDVTLLGSSDFSVTGNGLSNVI 145
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+S Y D G G+ TI + + +GG +
Sbjct: 146 TGNSGYNALSGGAGHDTIYGGSGRDTITGGDGNDSL------------DGGGSRDSMTGG 193
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
ND+++ S + + Y I
Sbjct: 194 AGNDTYVVDDSSDRVVELIGQGHDQVYT---------------------------TITTS 226
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
T+ +GG D G +N + + + G+ N ++ + +
Sbjct: 227 LAAYVEDLTLLGTGGID-----GSGNAENNVVTGNSGSNRLFGHGGNDSLDGDAGDDRLD 281
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G GND ++G + ++ +G D G G D+ + Y + + N+
Sbjct: 282 GGDGNDTLLGGAGSDSLQGYAGTDSVSGGDGNDSLYGYTGDDTLLGEGGNDYLYGDAGND 341
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + + + L+ G D
Sbjct: 342 TLTGDAGNDTLFAGGGLDLLMAGAGNDRLQDNIGEASTLVGGTGNDT 388
Score = 45.2 bits (105), Expect = 0.033, Method: Composition-based stats.
Identities = 40/368 (10%), Positives = 71/368 (19%), Gaps = 45/368 (12%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG--------------- 237
Y + N + G+D L
Sbjct: 43 DTYTGGNDNDTINGAGGNDSLSGGGGHDRLDGGSGNDTLVGGAGNDTYYTDVIGDVIVEL 102
Query: 238 ---------------------------GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
G ++ + I G ++ ++
Sbjct: 103 EGEGRDLVVSSRSFNMSGLLVEDVTLLGSSDFSVTGNGLSNVITGNSGYNALSGGAGHDT 162
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G SG D + G N+ D G +G DT+ ++
Sbjct: 163 IYGGSGRDTITGGDGNDSLDGGGSRDSMTGGAGNDTYVVD--DSSDRVVELIGQGHDQVY 220
Query: 331 NEHKQDFLSDVERLR-FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ VE L ID + +++ + L G D +
Sbjct: 221 TTITTSLAAYVEDLTLLGTGGIDGSGNAENNVVTGNSGSNRLFGHGGNDSLDGDAGDDRL 280
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+G D S Y G L A +
Sbjct: 281 DGGDGNDTLLGGAGSDSLQGYAGTDSVSGGDGNDSLYGYTGDDTLLGEGGNDYLYGDAGN 340
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ L + G D + L +
Sbjct: 341 DTLTGDAGNDTLFAGGGLDLLMAGAGNDRLQDNIGEASTLVGGTGNDTYAIYNASTLLTE 400
Query: 510 YITHGVKE 517
G+ E
Sbjct: 401 VAGGGLDE 408
Score = 41.7 bits (96), Expect = 0.45, Method: Composition-based stats.
Identities = 42/334 (12%), Positives = 85/334 (25%), Gaps = 19/334 (5%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
++ D T + D G T+ + L +
Sbjct: 304 TDSVSGGDGNDSLYGYTGDDTLLGEGGNDYLYGDAGNDTLTGDAGNDTLFAGGGLDLLMA 363
Query: 131 ALGLMHPGSYNG------GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
G G G Y + LT V + + A++
Sbjct: 364 GAGNDRLQDNIGEASTLVGGTGNDTYAIYNASTLLTEVAGGGLDEIWSSLATYTLGEHFE 423
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
I I + + + T+ G+D + V
Sbjct: 424 NLRIDVNDGIGIGNNKNNVITGNNAANRLDGAAGTDTLAGLNGNDTYVIDGNDVVVELDG 483
Query: 245 LNTESWSSIG-------------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
T+ S+ N+ +++ S+ G++GN+++ G+ ++
Sbjct: 484 GGTDQISASFSYGLADFVENLTLTGTGNLEGTGNSMSNSLTGNNGNNLLNGDGGSDTMTG 543
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GND + S D A + + + + E
Sbjct: 544 GLGNDTYYVQSAGDVVVENAGEGRDMVASWVSYSLFGTVVEDLTLIGPAGLSATGNTLGN 603
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ ++L AS + L +G D+F
Sbjct: 604 TLIGNDGNNVLNGMASRDVLTGGLGADIFLFTAG 637
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 17/248 (6%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+G + ND+++ + D + ++D V + G
Sbjct: 453 DGAAGTDTLAGLNGNDTYVIDGNDVVVELDGGGTDQISASFSYGLADFVENLTLTGTGNL 512
Query: 201 SLGNNIYKIEVQQKDSPF-------IQTIYDSGGDDLLDLTLIGGVKNYIDLNTE----- 248
N + + T+ G+D + G +
Sbjct: 513 EGTGNSMSNSLTGNNGNNLLNGDGGSDTMTGGLGNDTYYVQSAG-DVVVENAGEGRDMVA 571
Query: 249 ---SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
S+S G +++T+ + S G++ + +IGN NNV + DV G G D
Sbjct: 572 SWVSYSLFGTVVEDLTLIGPAGL-SATGNTLGNTLIGNDGNNVLNGMASRDVLTGGLGAD 630
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
F + A S +I F A +++ + + + +
Sbjct: 631 IFLFTAGSGGDRITDFNAAQNDRIDINAYTAGVANTGIVTQSGANVIIALGGSNIVTVLD 690
Query: 366 ASYEDLIQ 373
A D++
Sbjct: 691 AVRADVLS 698
>gi|227356398|ref|ZP_03840786.1| RTX toxin RtxA [Proteus mirabilis ATCC 29906]
gi|227163508|gb|EEI48429.1| RTX toxin RtxA [Proteus mirabilis ATCC 29906]
Length = 2821
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 64/223 (28%), Gaps = 20/223 (8%)
Query: 230 LLDL---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
LD + I ++ +++ G + N A + G G+D +
Sbjct: 2442 TLDFLRNSGHLKGDGDIHVSLGNYNFNWGGDGNDLGAYLGDNNNFWGGRGSDTFYATGIS 2501
Query: 287 NVFFESSGNDV---------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N+F GND+ G G DT +Y + + E +
Sbjct: 2502 NIFTGGYGNDLGVLMGRSNMMFGGDGDDTAIIAGRINN--VYLGDGLDKAFVFGEGGEIH 2559
Query: 338 LSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + + + ++ + ++ + G D + ++ G
Sbjct: 2560 TNAGNDYAVTTGNYNRIFSGSEQDFVVTIGNHNQISLEEGNDFAKIFGNYNRLNGGGG-- 2617
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
D + L Y + + + A + + G +
Sbjct: 2618 ---DDEIQLMGYHAVVDGGDGNDQLIAASFSKFSLLNGNTGND 2657
Score = 40.9 bits (94), Expect = 0.63, Method: Composition-based stats.
Identities = 34/231 (14%), Positives = 63/231 (27%), Gaps = 14/231 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI---GHA 131
DI N + + + + G G T + I G+
Sbjct: 2454 GDGDIHVSLGNYNFN---WGGDGNDLGAYLGDNNNFWGGRGSDTF-YATGISNIFTGGYG 2509
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
L + D+ + +V + + G T +D
Sbjct: 2510 NDLGVLMGRSNMMFGGDGDDTAIIAGRINNVYLGDGLDKAFVFGEGGEIHTNAGNDYAVT 2569
Query: 192 QKIYGAPKGSLGNN--IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
Y + + Q G+ + GG + I L
Sbjct: 2570 TGNYNRIFSGSEQDFVVTIGNHNQISLEEGNDFAKIFGN--YNRLNGGGGDDEIQL-MGY 2626
Query: 250 WSSIGGYEKNMTI--AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ + G + N + A + + G++GND++I N F +G D F
Sbjct: 2627 HAVVDGGDGNDQLIAASFSKFSLLNGNTGNDIIILGGYQNHFKGGNGIDSF 2677
>gi|326674248|ref|XP_002664668.2| PREDICTED: matrix metalloproteinase-20-like [Danio rerio]
Length = 422
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 20/127 (15%)
Query: 33 DVLTTHRLSFDITELNP-----NAQEVARWALGEWSKVVDLTFEETSIH-SDIKFISSNN 86
++ +++ I P + AL WS L F + +DI F ++
Sbjct: 92 PKWKSNIITYRIARFTPDLRPEEVENSLHLALKIWSDAAPLKFVQIKEGRADITFSFNSK 151
Query: 87 GYVCTPRYDS-------------RYFMEINFDKADVWRYGIG-KGTILSHNALHEIGHAL 132
+ +D +++FD ++W G G G L A HE+GH+L
Sbjct: 152 AHGDFFPFDGPGGVLAHAFEPGEGLGGDVHFDDDEIWTVGRGRPGYNLFTVAAHELGHSL 211
Query: 133 GLMHPGS 139
GL H
Sbjct: 212 GLSHSKD 218
>gi|255959000|gb|ACU43588.1| RTX-II toxin determinant A [Actinobacillus pleuropneumoniae]
Length = 956
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 9/234 (3%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFM--PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G +D +D S Y + Y V D A+ + +
Sbjct: 624 GSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHETIATHQT 683
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++GN KIE +++D F + ++ + N I ++ G
Sbjct: 684 NVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQF-NDIFKGSQFDDVFHGGNGVD 742
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + + + G +G+DV+ G + NN +GND+ G D + + I
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 321 FENAIIVYDANEHKQDFL-----SDVERLRFADQCIDSVN-VKQRSILEYTASY 368
+ ++ + +D S +E + + + N + + A+Y
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRIGNWFLEDDLASTVANY 856
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 61/212 (28%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT----ESWS------------- 251
I G D + + ID S+S
Sbjct: 617 GNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHE 676
Query: 252 SIGGYEKNMT--------------------------------------IAQHTVIESVV- 272
+I ++ N+ I + + + V
Sbjct: 677 TIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQFNDIFKGSQFDDVFH 736
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G D + GN ++ F +G+DV DG +G + F + I ++ I
Sbjct: 737 GGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNN--FLVGGTGNDIISGGKDNDIYVHKTG 794
Query: 333 HKQDFLSDV---ERLRFADQCIDSVNVKQRSI 361
D ++D ++L F+D + + K+
Sbjct: 795 DGNDSITDSGGQDKLAFSDVNLKDLTFKKVDS 826
Score = 40.2 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 54/219 (24%), Gaps = 48/219 (21%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG---------- 303
N+ ++ T I +GND V S+ V G+D S G
Sbjct: 596 FDDAGNIIESKDTKI-IANLGAGNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDAT 654
Query: 304 --------------LDTFFYYAPSYLYKIYRFENAIIVYDANEHK--------QDFLSDV 341
D+ + ++ + E D L V
Sbjct: 655 AETEKGSYSVKRYVGDSKALHETIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSV 714
Query: 342 ERL---RFAD------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
E + +F D ++ + L G DV +
Sbjct: 715 EEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGG 774
Query: 393 EGRDIT---FDSYLY---LGSYDDLRNVFGSDRGAAARH 425
G DI D+ +Y G +D G A
Sbjct: 775 TGNDIISGGKDNDIYVHKTGDGNDSITDSGGQDKLAFSD 813
>gi|1710800|sp|P55130|RTX31_ACTPL RecName: Full=RTX-III toxin determinant A from serotype 2; AltName:
Full=APX-IIIA; AltName: Full=Cytolysin IIIA;
Short=CLY-IIIA
gi|470685|gb|AAA21924.1| RTX toxin [Actinobacillus pleuropneumoniae serovar 2]
Length = 1049
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 11/130 (8%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G+D++ GN +++ + GND G +G D + K+ + +
Sbjct: 753 GADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLY--GGEGDDKLLGGNGNNYLSGGDG 810
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH--FYEFG 390
+ E + K L ++ + L G D E FY +
Sbjct: 811 -------NDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYR 863
Query: 391 LSEGRDITFD 400
+ G +D
Sbjct: 864 STSGNHTIYD 873
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 6/120 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTI- 262
+ + +Y G+D L GG + L + + G + N +
Sbjct: 756 GDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGDDKLLGGNGNNYLSGGDGNDELQ 815
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G G+D + G+S +++ GND +G G D + Y + S + IY
Sbjct: 816 VLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYRSTSGNHTIYDQG 875
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 4/129 (3%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA- 330
+GS+ D G+ ++F + G+D+ +G+ G D + ++ +Y
Sbjct: 734 IGSNQRDEFKGSKFRDIFHGADGDDLLNGNDGDDILY--GDKGNDELRGDNGNDQLYGGE 791
Query: 331 NEHKQDFLSDVERLRFADQCIDSVN-VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ K + L D + ++L + L G D+ + +
Sbjct: 792 GDDKLLGGNGNNYLSGGDGNDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYL 851
Query: 390 GLSEGRDIT 398
+G D
Sbjct: 852 EGGDGSDFY 860
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 50/162 (30%), Gaps = 25/162 (15%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D+ + ++ N + G + N + + + G G+D ++G + NN
Sbjct: 749 DIFHGADGDDLLNGNDG-DDILYGDKGNDELRGDNGNDQLYGGEGDDKLLGGNGNNYLSG 807
Query: 292 SSGND----------VFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHK 334
GND V G G D + + + + +
Sbjct: 808 GDGNDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYRSTSG 867
Query: 335 QDF------LSDVERLRFADQC-IDSVNVKQRSILEYTASYE 369
SD ++L +D + + + LE+ ++
Sbjct: 868 NHTIYDQGKASDSDKLYLSDLSFDNILVKRVNDNLEFRSNNN 909
Score = 47.1 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 31/263 (11%), Positives = 56/263 (21%), Gaps = 61/263 (23%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL----YKIYRFENAIIVYDANEHK-- 334
+ N+ F ++G+ G D +Y E
Sbjct: 627 HLGNGNDKVFLAAGSAEIHAGEGHDVVYYDKTDTGLLVIDGTKATEQGRYSVTRELSGAT 686
Query: 335 --------------------------------------QDFLSDVERL------RFADQC 350
D L VE + F
Sbjct: 687 KILREVIKNQKYAVGKREETLEYRDYELTQSGNSNLKAHDELHSVEEIGSNQRDEFKGSK 746
Query: 351 IDSV--NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ +L + L G D + EG D L G+
Sbjct: 747 FRDIFHGADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEG-----DDKLLGGNG 801
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
++ + + + ++ G+ Y +S DL++ L
Sbjct: 802 NNYLSGGDGNDELQVLGNGFNVLRGGKG----DDKLYGSSGSDLLDGGEGNDYLEGGDGS 857
Query: 469 HFSNFGCEEGRFVTFDSYLYLGS 491
F + G +D S
Sbjct: 858 DFYVYRSTSGNHTIYDQGKASDS 880
>gi|58176727|pdb|1SU3|A Chain A, X-Ray Structure Of Human Prommp-1: New Insights Into
Collagenase Action
gi|58176728|pdb|1SU3|B Chain B, X-Ray Structure Of Human Prommp-1: New Insights Into
Collagenase Action
Length = 450
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 53/185 (28%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 89 RWEQTHLTYRIENYTPDLPRADVD-------HAIEKAFQLWSNVTPLTFTKVSEGQADIM 141
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 142 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLHRVAA 198
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 199 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIG---PQT 255
Query: 183 PMVSD 187
P D
Sbjct: 256 PKACD 260
>gi|330967460|gb|EGH67720.1| mannuronan C-5-epimerase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 691
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/320 (13%), Positives = 84/320 (26%), Gaps = 14/320 (4%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL +S + ++ G+S +D ++G++ N++ G D G G
Sbjct: 282 DLGFRGDASDNNDPAAIFAGGQNEGGNIFGTSDDDTLVGSAGNDILDGDQGADDMTGGDG 341
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L ID ++++
Sbjct: 342 NDIYVVDNALDTVIESNDSPSQVDTVVSSVSWTLGANVENLLLTGVSAIDGTGNALKNVI 401
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+S L G D+ + + + + + + D +A
Sbjct: 402 TGNSSDNVLDGGAGGDLLKGGDGSDSYY------VDDVADRVVETNSDAWVGGVDTVYSA 455
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRF 480
Y E + D L D + G D S G
Sbjct: 456 LASYTLGANLENIAITRTDTANANGNALDNVLYAGAGDNVLDGRDGNDTVSYLFASAGVA 515
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH--GVKEGRNP---DAFKALEYIASHED 535
V ++ + + + G K D L A +
Sbjct: 516 VALNTSAQQATGGSGLDTLKGTENLTGSQFADSLTGNKNANVLHGGDGNDTLSGGAGDDV 575
Query: 536 LINAFADAPDLVQAGKDHFS 555
LI + G D +
Sbjct: 576 LIGGSGADTLIGGTGADRYV 595
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 36/282 (12%), Positives = 83/282 (29%), Gaps = 16/282 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI--------GGYEKNM 260
+ G+D+ + + + ++ G +N+
Sbjct: 323 GNDILDGDQGADDMTGGDGNDIYVVDNALDTVIESNDSPSQVDTVVSSVSWTLGANVENL 382
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + I+ G++ +V+ GNS++NV +G D+ G G D+++ +
Sbjct: 383 LLTGVSAID-GTGNALKNVITGNSSDNVLDGGAGGDLLKGGDGSDSYYVDDVADRVVETN 441
Query: 321 FE---NAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + + +++E + ++ ++L A L G
Sbjct: 442 SDAWVGGVDTVYSALASYTLGANLENIAITRTDTANANGNALDNVLYAGAGDNVLDGRDG 501
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE-GR 435
D + F G++ + + D L+ A +
Sbjct: 502 NDTVSYL--FASAGVAVALNTSAQQATGGSGLDTLKGTENLTGSQFADSLTGNKNANVLH 559
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D L A + LI + G D + +E
Sbjct: 560 GGDGNDTLSGGAGDDVLIGGSGADTLIGGTGADRYVFNSLDE 601
>gi|227822477|ref|YP_002826449.1| hemolysin-type calcium-binding repeat-like hypothetical protein
[Sinorhizobium fredii NGR234]
gi|227341478|gb|ACP25696.1| hemolysin-type calcium-binding repeat-like hypothetical protein
[Sinorhizobium fredii NGR234]
Length = 976
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/357 (12%), Positives = 92/357 (25%), Gaps = 49/357 (13%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
S + + D G G ++ + LG +
Sbjct: 586 GGSGNDIFVGGALNDALHGGNGHDSLTGGAGDDVLAGNLG------------NDTLAGGL 633
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
ND+ + ++ +D + + D G G + ++ +
Sbjct: 634 GNDTLSGDGVGFYGGRDKISGEDGNDRVYAGIGDTA---------DGGTGTDTLDLDARN 684
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
+ + G +D T ++ G T+ ++ + + G
Sbjct: 685 QTKDISFSFAT--GSATVDTTTSFKAFEVLN--------YLGSAGKDTVTGGSLNDRLEG 734
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
++GND + G + N+V + +G+D G +G DT S + AN
Sbjct: 735 NAGNDTLRGGAGNDVLHDGAGSDSLFGDAGNDTLVRTVFSGTDVFDGGAGTDTLSFANAS 794
Query: 334 KQD------------------FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + E + + + L + + L
Sbjct: 795 DISVVLDLQSQASNRGMAQGLTVKNFEIINGSGNDDVLRGDALANTLNGGGADDVLDGRA 854
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D G D+ D+ F + +G+
Sbjct: 855 GVDRLNGGAGDDWLTGGTGNDLFVFDRSGRDGEGDVITDFTRGQDKLLIDKSDYGIA 911
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 73/590 (12%), Positives = 140/590 (23%), Gaps = 69/590 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ S + + + I +D+ G G ++ S L
Sbjct: 434 GAGNDVVKSVGSAQSVSFSGFAGNDTLIGTAGSDMLDGGTGNDSLSSGAGNDR------L 487
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G N G D DS + + D
Sbjct: 488 IDFGGTNVINAGDGNDTVTVGDSGALIGNNTVDLGTGNDSFERTASTGKLTLDGGTGTDF 547
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + + + ++ + L+GG N I + ++
Sbjct: 548 AGIDFSKYTAGV----TFKLAPSVTVSNAPVAVKNIERVKLVGGSGNDIFVGGALNDALH 603
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS-----GNDVFDGSSGLDTFFY 309
G + ++ + + G+ GND + G N+ G D G G D +
Sbjct: 604 GGNGHDSLTGGAGDDVLAGNLGNDTLAGGLGNDTLSGDGVGFYGGRDKISGEDGNDRVYA 663
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT--AS 367
+ + + + + K +L Y A
Sbjct: 664 GIGDTADGGTGTDTLDLDARNQTKD----ISFSFATGSATVDTTTSFKAFEVLNYLGSAG 719
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ + D E G D+ D + D N
Sbjct: 720 KDTVTGGSLNDRLEGNAGNDTLRGGAGNDVLHDGAGSDSLFGDAGNDTLVRTV------- 772
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ A + L A A +V + SN G +G V +
Sbjct: 773 ---------FSGTDVFDGGAGTDTLSFANASDISVVLDLQSQASNRGMAQGLTVKNFEII 823
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
DD+ R L + + L
Sbjct: 824 NGSGNDDVL----------------------RGDALANTLNGGGADDVLDGRAGVDRLNG 861
Query: 548 QAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
AG D G F+ D+ F + +G+
Sbjct: 862 GAGDD--WLTGGTGNDLFVFDRSG-RDGEGDVITDFTRGQDKLLIDKSDYGIA------- 911
Query: 608 SGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDLYSM 657
+ +++ ++ + F+ L+ D G G+ D +L ++
Sbjct: 912 AADASVTLVVGADPVATSTKGTFLFESDNGRLWFDADGKGSEADLELVAI 961
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 46/360 (12%), Positives = 87/360 (24%), Gaps = 23/360 (6%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
I GG+D L + G + ++ G + + +
Sbjct: 11 DTLDGDFGTDQILGMGGNDTLSGSFQG----DMIFGDTGEDTVNGNSGDDFLDGGDASDH 66
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G SG D ++ + DV DG SG D + +
Sbjct: 67 INGGSGRDTIMSEVPLLRELDFGDGDVVDGGSGTDRLMVNYSELSEGVSITI-RDWITPQ 125
Query: 331 NEHKQDFLSDVERLRFADQC-----------IDSVNVKQRSILEYTASYEDLIQVIGQDV 379
++VE + L + L+ +G D
Sbjct: 126 TLTGNIQATNVEAFYITGTDFADMVTGGNYSDMLSGGEGDDKLTGGRGADLLMGDLGNDT 185
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ +G D+ D N + G D
Sbjct: 186 LKGGYGLDFLNGGDGNDVLTGDNGNDFLAGDGGNDDVRGGTGSDSVSGGLGTDSLFGDDG 245
Query: 440 FKALEYIASHEDLINAFADAPDL--VQVGKDHFSNFGCEEGRFV-TFDSYLYLGSYDDLR 496
L+ A + + + GKD ++ G + + F L
Sbjct: 246 DDMLDGGAGDDKVEGGLGNDTITYIYGEGKDTITDAGGSDRLVIRNFTGDFTAKLPTQLN 305
Query: 497 NVFGSDRGAAARHY----ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G HY G+ + ++ A ++ + + GKD
Sbjct: 306 TLAGGTTFVGMDHYTIVATGTGINKIVTGAGNDVVDSGAGNDSVSGGAGNDNLNAGIGKD 365
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/394 (12%), Positives = 92/394 (23%), Gaps = 59/394 (14%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
++ G + + S G+ N T+ + + G +GND + + N+
Sbjct: 428 HYRVSFGAGNDVVKSVGSAQSVSFSGFAGNDTLIGTAGSDMLDGGTGNDSLSSGAGNDRL 487
Query: 290 FESSGNDVFDGSSGLDTF------------FYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G +V + G DT + R + + DF
Sbjct: 488 IDFGGTNVINAGDGNDTVTVGDSGALIGNNTVDLGTGNDSFERTASTGKLTLDGGTGTDF 547
Query: 338 ----------------------------LSDVERLRFADQCIDSV--NVKQRSILEYTAS 367
+ ++ER++ + + L
Sbjct: 548 AGIDFSKYTAGVTFKLAPSVTVSNAPVAVKNIERVKLVGGSGNDIFVGGALNDALHGGNG 607
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
++ L G DV G D + D + + A
Sbjct: 608 HDSLTGGAGDDVLAGNLGNDTLAGGLGNDTLSGDGVGFYGGRDKISGEDGNDRVYAG--- 664
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ + L + + S F F+
Sbjct: 665 -----------IGDTADGGTGTDTLDLDARNQTKDISFSFATGSATVDTTTSFKAFEVLN 713
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
YLGS GS G R L A + L + +
Sbjct: 714 YLGSAGKDTVTGGSLNDRLE---GNAGNDTLRGGAGNDVLHDGAGSDSLFGDAGNDTLVR 770
Query: 548 QAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWN 581
G +++F ++ DL +
Sbjct: 771 TVFSGTDVFDGGAGTDTLSFANASDISVVLDLQS 804
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/337 (13%), Positives = 83/337 (24%), Gaps = 17/337 (5%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S I + G F++ + + L E+ G
Sbjct: 32 SGSFQGDMIFGDTGEDTVNGNSGDDFLDGGDASDHINGGSGRDTIMSEVPLLRELDFGDG 91
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ G + E S + A+ +D +
Sbjct: 92 DVVDGGSGTDRLMVNYSELSEGVSITIRDWITPQTLTGNIQATNVEAFYITGTDFADMVT 151
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTE 248
G + + + + G+D L L GG N +
Sbjct: 152 GGNYSDMLSGG---EGDDKLTGGRGADLLMGDLGNDTLKGGYGLDFLNGGDGNDVLTGDN 208
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G N + T +SV G G D + G+ +++ +G+D +G G DT
Sbjct: 209 GNDFLAGDGGNDDVRGGTGSDSVSGGLGTDSLFGDDGDDMLDGGAGDDKVEGGLGNDTIT 268
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHK---------QDFLSDVERLRFADQCIDSVNVKQR 359
Y I + + N + L+ D
Sbjct: 269 YIYGEGKDTITDAGGSDRLVIRNFTGDFTAKLPTQLNTLAGGTTFVGMDHYTIVATGTGI 328
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + A + + G D G+D
Sbjct: 329 NKIVTGAGNDVVDSGAGNDSVSGGAGNDNLNAGIGKD 365
Score = 42.9 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 55/487 (11%), Positives = 101/487 (20%), Gaps = 74/487 (15%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + + +G R + D G + ++
Sbjct: 201 NDVLTGDNGNDFLAGDGGNDDVRGGTGSDSVSGGLGTDSLFGDDGDDMLDGGAGDDKVEG 260
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
LG + +T + + S
Sbjct: 261 GLG----------------------NDTITYIYGEGKDTITDAGGSDRL----------- 287
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ G+ K+ Q T G D + G N I +
Sbjct: 288 ------VIRNFTGDFTAKLPTQLNTLAGGTTFV---GMDHYTIVATGTGINKI-VTGAGN 337
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF-ESSGNDVFDGSSGLDTFFY 309
+ N +++ +++ G D V G N+V G D DG +G DT
Sbjct: 338 DVVDSGAGNDSVSGGAGNDNLNAGIGKDSVSGGDGNDVVTLGDGGADSGDGGAGTDTVIV 397
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS----VNVKQRSILEYT 365
+ + + L + E R + + V Q
Sbjct: 398 DRRAATASLSFSATNATATLS---DGTSLKNFEHYRVSFGAGNDVVKSVGSAQSVSFSGF 454
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
A + LI G D+ + G D D
Sbjct: 455 AGNDTLIGTAGSDMLDGGTGNDSLSSGAGNDRLIDFGGTNVINA---------------- 498
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+G + + + + + + G F D
Sbjct: 499 ------GDGNDTVTVGDSGALIGNNTVDLGTGNDSFERTASTGKLTLDGGTGTDFAGIDF 552
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
Y + A + A ++ L
Sbjct: 553 SKYTAGVTFKLAPSVTVSNAPVAV-KNIERVKLVGGSGNDIFVGGALNDALHGGNGHDSL 611
Query: 546 LVQAGKD 552
AG D
Sbjct: 612 TGGAGDD 618
>gi|157688244|gb|ABQ02439.1| enterohemolysin [Escherichia coli]
Length = 998
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 34/216 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYR 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKAINGVLSFNDSND 889
Query: 370 D----LIQVIGQDVFESMKHFYE-FGLSEGRDITFD 400
+D + H E +GR+I D
Sbjct: 890 VNGITFKNWFAKDASGADNHLVEVITDKDGREIKVD 925
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 46/164 (28%), Gaps = 19/164 (11%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G I +E ++G +D G N++F + GND +G+ G D +
Sbjct: 685 FEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLY- 743
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + ++ + D LS D L+ +Y
Sbjct: 744 -GDDGDDYISGGQGDDQLFGGS--GNDKLSG------GDGNNYLTGGSGNDELQAHGAYN 794
Query: 370 DLIQVIGQDVFE---------SMKHFYEFGLSEGRDITFDSYLY 404
L G D + G DI Y
Sbjct: 795 ILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNY 838
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 56/197 (28%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKRVGNDLI 873
>gi|1805762|emb|CAA60042.1| EHEC-hlyA [Escherichia coli]
Length = 998
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 34/216 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYG 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKAINGVLSFNESND 889
Query: 370 D----LIQVIGQDVFESMKHFYE-FGLSEGRDITFD 400
+D + H E +GR+I D
Sbjct: 890 VNGITFKNWFAKDASGADNHLVEVITDKDGREIKVD 925
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 46/164 (28%), Gaps = 19/164 (11%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G I +E ++G +D G N++F + GND +G+ G D +
Sbjct: 685 FEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLY- 743
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + ++ + D LS D L+ +Y
Sbjct: 744 -GDDGDDYISGGQGDDQLFGGS--GNDKLSG------GDGNNYLTGGSGNDELQAHGAYN 794
Query: 370 DLIQVIGQDVFE---------SMKHFYEFGLSEGRDITFDSYLY 404
L G D + G DI Y
Sbjct: 795 ILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNY 838
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 55/197 (27%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKRVGNDLI 873
Score = 40.5 bits (93), Expect = 0.87, Method: Composition-based stats.
Identities = 34/236 (14%), Positives = 61/236 (25%), Gaps = 29/236 (12%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----AIIVYDANEHK------- 334
++V + +G+ G D Y + N +
Sbjct: 605 DDVVYSGAGSSEVFAGEGYDPVSYNKTDVGKLTIDATGAPKPGEYIVPKNMYGDVEVLQE 664
Query: 335 ------QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
E++++ D + +++ S E+LI D F+ K
Sbjct: 665 VVKEQEVSVGKRTEKIQYRDFEFRTGG-IPYDVIDNLHSVEELIGGKHDDEFKGGKFNDI 723
Query: 389 FGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRGAAARH-----YITHGVKEGRNPDA 439
F ++G D + LY DD + D G
Sbjct: 724 FHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSG 783
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYD 493
L+ ++ L D G D + F D Y+Y +Y
Sbjct: 784 NDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNYG 839
>gi|38267|emb|CAA28858.1| unnamed protein product [Homo sapiens]
Length = 469
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 53/185 (28%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 108 RWEQTHLTYRIENYTPDLPRADVD-------HAIEKAFQLWSNVTPLTFTKVSEGQADIM 160
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + + A
Sbjct: 161 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEHERWTNNFTEYNLHR-VAA 217
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 218 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIG---PQT 274
Query: 183 PMVSD 187
P D
Sbjct: 275 PKACD 279
>gi|332846033|ref|XP_001150678.2| PREDICTED: matrix metalloproteinase-15 isoform 1 [Pan troglodytes]
Length = 669
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 47/162 (29%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + W+N+ + T + E R A W + L F+E
Sbjct: 134 LTGRKWNNHHXTFSIQNYTEKLGWYHS-------MEAVRRAFRVWEQATPLVFQEVPYED 186
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+ +
Sbjct: 187 IRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSST 246
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + N + D +N
Sbjct: 247 DLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDIDN 288
>gi|326914446|ref|XP_003203536.1| PREDICTED: collagenase 3-like [Meleagris gallopavo]
Length = 512
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 47/150 (31%), Gaps = 27/150 (18%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T D+ + + A WS V L F S +
Sbjct: 150 RKLKWSKTNLTYRIVSYTPDLRRADV-------ERAFKKAFKVWSDVTPLNFTRIRSGTA 202
Query: 78 DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + P Y + +FD + W +G L
Sbjct: 203 DIMISFGTKEHGDFYPFDGPSGLLAHAFPP--GPDYGGDAHFDDDETWS-NDSRGYNLFL 259
Query: 123 NALHEIGHALGLMHP-GSYNGGYPVYGVDN 151
A HE GH+LGL H +P+Y
Sbjct: 260 VAAHEFGHSLGLEHSRDPGALMFPIYTYTG 289
>gi|261380931|ref|ZP_05985504.1| putative iron-regulated protein FrpC [Neisseria subflava NJ9703]
gi|284796184|gb|EFC51531.1| putative iron-regulated protein FrpC [Neisseria subflava NJ9703]
Length = 822
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 37/117 (31%), Gaps = 13/117 (11%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
I G+D ++ I GY+ N + +S+ G
Sbjct: 598 SGGDGNDRIRGGLGNDTIN-------------GDSGNDIIFGYDGNDRLNGGMGNDSIHG 644
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+GND + G S N+ GNDV G G D + Y E + D
Sbjct: 645 GNGNDTLWGESGNDRLNGGDGNDVLFGGQGTDYLVGGKGADTYVFSLGEGKDTITDN 701
>gi|224043580|ref|XP_002199979.1| PREDICTED: matrix metallopeptidase 27 [Taeniopygia guttata]
Length = 466
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 61/196 (31%), Gaps = 48/196 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + Y+ T D+ + A WS V L F +DI
Sbjct: 106 WKKNKLTYRIVNYTPDMSKEDVDK-------AVEKAFKVWSAVTPLIFTRIHKGIADIMI 158
Query: 82 ISSNNGYVCTPRY--------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +++FD+ + W G G L A HE
Sbjct: 159 AFGTKVHGHCPRYFDGPLGVLAHAFPPGTGLGGDVHFDEDEDWTTGSA-GFNLFLVAAHE 217
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H + + +Y P + + +P D
Sbjct: 218 FGHALGLSHSND---------------QSALMFPNYAYISPSE--------FPLSP--DD 252
Query: 188 IVAVQKIYGAPKGSLG 203
I +Q IYG P +
Sbjct: 253 ISGIQSIYGPPTNASD 268
>gi|148234994|ref|NP_001084478.1| matrix metallopeptidase 14 (membrane-inserted) [Xenopus laevis]
gi|53830063|gb|AAU94940.1| membrane type-1 matrix metalloproteinase 14 [Xenopus laevis]
gi|124481693|gb|AAI33190.1| Mmp14 protein [Xenopus laevis]
Length = 575
Score = 66.7 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W V L F E
Sbjct: 105 IQGLKWQHKDITFCIQNYTPKIGEYSTYE-------AIRRAFKVWESVTPLRFREVRYVD 157
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + R
Sbjct: 158 IKDGYTKHADIMLFFAEGFHGDSTPFDGEGGFLAHAYFPGSGIGGDTHFDSAEPWTARND 217
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
+G L A+HE+GHALGL H + + D N
Sbjct: 218 DLEGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTTN 259
>gi|297690058|ref|XP_002822444.1| PREDICTED: matrix metalloproteinase-20-like [Pongo abelii]
Length = 483
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 59/198 (29%), Gaps = 53/198 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T S ++ + AL WS V L+F + +DI
Sbjct: 117 WKKNTLTYRISKYTPSMSSVEVDK-------AVEMALQAWSSAVPLSFVRINSGEADIMI 169
Query: 82 ISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
N + P + +FD A+ W G G L A H
Sbjct: 170 SFENGDHGDSYPFDGPRGTLAHAFAP--GEGLGGDTHFDNAEKWTMGT-NGFNLFTVAAH 226
Query: 127 EIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
E GHALGL H YP Y N Y
Sbjct: 227 EFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKD------------------------- 261
Query: 186 SDIVAVQKIYGAPKGSLG 203
D+ +Q +YG K LG
Sbjct: 262 -DVKGIQALYGPRKAFLG 278
>gi|207723112|ref|YP_002253514.1| putative calcium-binding hemolysin-like protein (partial sequence)
[Ralstonia solanacearum IPO1609]
gi|206588305|emb|CAQ19000.1| putative calcium-binding hemolysin-like protein (partial sequence)
[Ralstonia solanacearum IPO1609]
Length = 825
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 58/452 (12%), Positives = 111/452 (24%), Gaps = 56/452 (12%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ T R + + D G G T+
Sbjct: 220 DVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEGGNDTYLFG 279
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-IVA 190
G Y+ + + S + +D I A
Sbjct: 280 KGDGQDFIYSDYDTSAN-----KLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGTTDKITA 334
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYID---- 244
Y + N I +++ + + TI GDD + + I+
Sbjct: 335 SMAFYWDDTANPYNPIQQVKFSDGTTWDLATIKAKALIGDDSSQTLVGYTEADTINALGG 394
Query: 245 ----LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ G N T+ +++ G + ND + G + N+ +GND G
Sbjct: 395 NDNVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSG 454
Query: 301 SSGLDTFFYYAPSYLYKIYR-------------------------FENAIIVYDANEHKQ 335
G DT+ + IY + + +
Sbjct: 455 EGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGTT 514
Query: 336 DFLSD---------------VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D ++ V++++F+D + + Q T + L G D+
Sbjct: 515 DKITASMFFYWDDAANPYNPVQQVKFSDGTVWATADLQARASGGTDGADTLTGSSGSDII 574
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
++ G D+ Y N Y +G
Sbjct: 575 YALGGNDAVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLYGGNGNDVLDGGTGN 634
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
L ++ + D D + D +N
Sbjct: 635 DTLSGEGGNDTYLFGKGDGQDFIYSDYDTSAN 666
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 84/306 (27%), Gaps = 9/306 (2%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ T R + + D G G T+
Sbjct: 405 DVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLSGEGGNDTYLFG 464
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-IVA 190
G Y+ + + S + +D I A
Sbjct: 465 KGDGQDFIYSDYDTSAN-----KLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGTTDKITA 519
Query: 191 VQKIYGAPKGSLGNNI--YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
Y + N + K + SGG D D L G + I
Sbjct: 520 SMFFYWDDAANPYNPVQQVKFSDGTVWATADLQARASGGTDGADT-LTGSSGSDIIYALG 578
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G + + +++ G GND++ G + N+ + +GNDV DG +G DT
Sbjct: 579 GNDAVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLYGGNGNDVLDGGTGNDTLS 638
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ Y + + +Y + + L+ ++ V ++ A
Sbjct: 639 GEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGT 698
Query: 369 EDLIQV 374
D I
Sbjct: 699 TDKITA 704
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 57/440 (12%), Positives = 112/440 (25%), Gaps = 13/440 (2%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ R + + DV G G T+
Sbjct: 35 DVLDGGAGNDTLYGGEGNDILRGGADNDNLYGANGNDVLDGGTGNDTLSGEGGNDTYLFG 94
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-IVA 190
G Y+ + + S + +D I A
Sbjct: 95 KGDGQDFIYSDYDTSAN-----KLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGTTDKITA 149
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTE 248
Y + N I +++ + + TI GDD + + I+
Sbjct: 150 SMAFYWDDTANPYNPIQQVKFSDGTAWDLATIKAKALIGDDSSQTLVGYTEADTIN-ALG 208
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G + + +++ G GND + G + N+ + +GND DG +G DT
Sbjct: 209 GNDNVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTGNDTLS 268
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ Y + + +Y + + L+ ++ V ++ A
Sbjct: 269 GEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGT 328
Query: 369 EDLIQV----IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
D I D + S+G + D + A
Sbjct: 329 TDKITASMAFYWDDTANPYNPIQQVKFSDGTTWDLATIKAKALIGDDSSQTLVGYTEADT 388
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
G L+ A ++ L + D+ +
Sbjct: 389 INALGGNDNVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADNDNLYGGNGNDTLDGGTG 448
Query: 485 SYLYLGSYDDLRNVFGSDRG 504
+ G + +FG G
Sbjct: 449 NDTLSGEGGNDTYLFGKGDG 468
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 85/284 (29%), Gaps = 5/284 (1%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
SGG D D L G + I ++ G + + +++ G GND++ G +
Sbjct: 1 SGGTDGADT-LTGSSGSDIIYALGGNDAVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGA 59
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+ + ++GNDV DG +G DT + Y + + +Y + + L+ ++
Sbjct: 60 DNDNLYGANGNDVLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFK 119
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQV----IGQDVFESMKHFYEFGLSEGRDITFD 400
V ++ A D I D + S+G
Sbjct: 120 DGVSPSEVVVTRSGSDLVLSIAGTTDKITASMAFYWDDTANPYNPIQQVKFSDGTAWDLA 179
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+ D + A G L+ A ++ L +
Sbjct: 180 TIKAKALIGDDSSQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTLYGGEGNDT 239
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
D+ + + G + +FG G
Sbjct: 240 LRGGADNDNLYGGNGNDTLDGGTGNDTLSGEGGNDTYLFGKGDG 283
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 64/513 (12%), Positives = 118/513 (23%), Gaps = 61/513 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D T DV G G T+ +
Sbjct: 188 GDDSSQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTLYGGEGNDTLRGGADND 247
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ NG + G + + F D Y + ++ +Q
Sbjct: 248 NLYGGNGNDTLDGGTGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNV--IQFKD 305
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + ++ + I S D + + + +
Sbjct: 306 GVSPSEVVVTRSGSDLVLSIAGTTDKITASMAFYWDDTANPYNPIQQVKFSDGTTWDLAT 365
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ I + +++VG + D + N+ + G+DV DG +G DT +
Sbjct: 366 IKAKALIGDDSS-QTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTLY------- 417
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
D L L + L
Sbjct: 418 ---------------GGEGNDTLRG---------------GADNDNLYGGNGNDTLDGGT 447
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D + +G F Y S + L + D + + +T +
Sbjct: 448 GNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSANKLNVIQFKDGVSPSEVVVTRSGSDLV 507
Query: 436 NPDAFKALEYIA-----------SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV--- 481
A + A + + + G +G
Sbjct: 508 LSIAGTTDKITASMFFYWDDAANPYNPVQQVKFSDGTVWATADLQARASGGTDGADTLTG 567
Query: 482 --TFDSYLYLGSYDDLRNVFGSDR----GAAARHYITHGVKEGRNPDAFKALEYIASHED 535
D LG D + G D Y G R L ++
Sbjct: 568 SSGSDIIYALGGNDAVYGQGGDDVLDGGAGNDTLYGGEGNDILRGGADNDNLYGGNGNDV 627
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
L + + G D + FG +G+ ++
Sbjct: 628 LDGGTGNDTLSGEGGNDTYL-FGKGDGQDFIYS 659
>gi|197384336|ref|NP_001128002.1| matrix metallopeptidase 1a [Rattus norvegicus]
gi|197246479|gb|AAI69019.1| Mmp1a protein [Rattus norvegicus]
Length = 464
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/224 (18%), Positives = 61/224 (27%), Gaps = 48/224 (21%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIK 80
W+ + Y T + I + A WS V LTFE DI
Sbjct: 105 RWTKTHLTYSILNYTPYLPKEVI-------ENAIERAFKVWSDVTPLTFERVFEEEGDIV 157
Query: 81 FISS-------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
F G T R ++++D + W + A HE
Sbjct: 158 FAFYRGDHSDNNPFDGPEYGLAHTFPPGPRLGGDVHYDLDETWTDNSDNFNLFYVTA-HE 216
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H S + G ++ Y D L D
Sbjct: 217 LGHSLGLTH--SRDVGALMFPSYTWYTEDFVLNQE------------------------D 250
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL 231
I +Q +YG + I G+ +
Sbjct: 251 INRIQALYGPSPNPIQPTGATTPHPCDGDLTFDAITTFRGEVMF 294
>gi|291567112|dbj|BAI89384.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 999
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + IY GG D L +YID + G + N T+
Sbjct: 820 GNDIIRGTDGPNIIYGLGGSDRLY---GNAGDDYIDGGEG-DDLLYGGDGNDTLIGGRGS 875
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +G+D++ G N++ + GND G G D + + L+ + + I+Y
Sbjct: 876 DRLYGEAGDDLLDGGEGNDILYGGPGNDTLIGGPGSDRLYGGPGNDLFILQEGMGSDIIY 935
Query: 329 DANEHK---QDFLSDVERLRFADQCIDSVNVK 357
D + Q + + L F+D I + +
Sbjct: 936 DFGDGTNQIQVLNAGGQTLSFSDLDISTRSGS 967
Score = 44.8 bits (104), Expect = 0.052, Method: Composition-based stats.
Identities = 26/254 (10%), Positives = 61/254 (24%), Gaps = 24/254 (9%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G Y+ E+ + ++ D D+ + T + +
Sbjct: 692 VRTTDSGGLTYEKELTVNINDINESPTDLTLDNTSIDENVAAGTAVGSFTTTDPDTGDTF 751
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + SG+ ++I NS + F Y
Sbjct: 752 TYELVAGTGDTDNAAFSVSGDQLLINNSPD---------------------FETQSIYNI 790
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
++ ++ + YD + ++E + + +I+ + L G
Sbjct: 791 RVRTTDSGGLTYDR---ELTINVNIEPIYATEGNDIIRGTDGPNIIYGLGGSDRLYGNAG 847
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + + +G D Y + + Y G
Sbjct: 848 DDYIDGGEGDDLLYGGDGNDTLIGGRGSDRLYGEAGDDLLDGGEGNDILYGGPGNDTLIG 907
Query: 437 PDAFKALEYIASHE 450
L ++
Sbjct: 908 GPGSDRLYGGPGND 921
>gi|221634560|ref|YP_002523248.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
KD131]
gi|221163433|gb|ACM04395.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
KD131]
Length = 313
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/257 (15%), Positives = 71/257 (27%), Gaps = 43/257 (16%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI-------GHALGLMHPG 138
+ TP + AD G G TI + + + G H
Sbjct: 20 SALAQTPAGTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGDGDDLLDGGFYHDA 79
Query: 139 SY-------------NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
Y + VYG D + + D
Sbjct: 80 CYGQAGNDTFRIRGVDLADDVYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPFGP 139
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ +++ + G+ + S +T+ G+D L+
Sbjct: 140 YVVKSIEIVKGSARA----------DVLLGSRLAETLSGGLGNDRLE------------- 176
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G E + T + +VG +GND + G +V +GND+ G G D
Sbjct: 177 GRGGADVLRGMEGADALFGGTGNDLLVGGAGNDRLDGQWERDVLVGGAGNDILIGGGGAD 236
Query: 306 TFFYYAPSYLYKIYRFE 322
F + +I F
Sbjct: 237 RFVFAGNFGRDRIRDFS 253
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 47/175 (26%), Gaps = 31/175 (17%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLD 305
G N + + +VG GND + G + + G+ D G +G D
Sbjct: 28 GTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGDGDDLLDGGFYHDACYGQAGND 87
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDAN----------------------EHKQDFLSDVER 343
TF +Y + + + +E
Sbjct: 88 TFRIRGVDLADDVYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPFGPYVVKSIEI 147
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++ + + + + L + L G DV M+ G D+
Sbjct: 148 VKGSARADVLLGSRLAETLSGGLGNDRLEGRGGADVLRGMEGADALFGGTGNDLL 202
>gi|1524027|emb|CAA63849.1| EHEC-hemolysin [Escherichia coli]
Length = 998
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 34/216 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYR 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKAINGVLSFNESND 889
Query: 370 D----LIQVIGQDVFESMKHFYE-FGLSEGRDITFD 400
+D + H E +GR+I D
Sbjct: 890 VNGITFKNWFAKDASGADNHLVEVITDKDGREIKVD 925
Score = 60.6 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 46/164 (28%), Gaps = 19/164 (11%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G I +E ++G +D G N++F + GND +G+ G D +
Sbjct: 685 FEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLY- 743
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + ++ + D LS D L+ +Y
Sbjct: 744 -GDDGDDYISGGQGDDQLFGGS--GNDKLSG------GDGNNYLTGGSGNDELQAHGAYN 794
Query: 370 DLIQVIGQDVFE---------SMKHFYEFGLSEGRDITFDSYLY 404
L G D + G DI Y
Sbjct: 795 ILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNY 838
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 56/197 (28%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKRVGNDLI 873
>gi|62897631|dbj|BAD96755.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
Length = 469
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 53/185 (28%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 108 RWEQTHLTYRIENYTPDLPRADVD-------HAIEKAFQLWSNVTPLTFTKVSEGQADIM 160
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 161 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLHRVAA 217
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 218 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIG---PQT 274
Query: 183 PMVSD 187
P D
Sbjct: 275 PKACD 279
>gi|52630374|gb|AAU84700.1| ApxIIA [Actinobacillus pleuropneumoniae]
Length = 956
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 80/234 (34%), Gaps = 9/234 (3%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFM--PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G +D +D S Y + Y V D A+ + +
Sbjct: 624 GSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHETIATHQT 683
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++GN KIE +++D F + ++ + N I ++ G
Sbjct: 684 NVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQF-NDIFKGSQFDDVFHGGNGVD 742
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + + + G +G+DV+ G + NN +GND+ G D + + I
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 321 FENAIIVYDANEHKQDFL-----SDVERLRFADQCIDSVN-VKQRSILEYTASY 368
+ ++ + +D S +E + + + N + + A+Y
Sbjct: 803 SGGQDKLAFSDVNLKDLTFKKVDSSLEIINQKGEKVRIGNWFLEDDLASTVANY 856
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 61/212 (28%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT----ESWS------------- 251
I G D + + ID S+S
Sbjct: 617 GNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHE 676
Query: 252 SIGGYEKNMT--------------------------------------IAQHTVIESVV- 272
+I ++ N+ I + + + V
Sbjct: 677 TIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQFNDIFKGSQFDDVFH 736
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G D + GN ++ F +G+DV DG +G + F + I ++ I
Sbjct: 737 GGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNN--FLVGGTGNDIISGGKDNDIYVHKTG 794
Query: 333 HKQDFLSDV---ERLRFADQCIDSVNVKQRSI 361
D ++D ++L F+D + + K+
Sbjct: 795 DGNDSITDSGGQDKLAFSDVNLKDLTFKKVDS 826
Score = 40.2 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 54/219 (24%), Gaps = 48/219 (21%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG---------- 303
N+ ++ T I +GND V S+ V G+D S G
Sbjct: 596 FDDAGNIIESKDTKI-IANLGAGNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDAT 654
Query: 304 --------------LDTFFYYAPSYLYKIYRFENAIIVYDANEHK--------QDFLSDV 341
D+ + ++ + E D L V
Sbjct: 655 AETEKGSYSVKRYVGDSKALHETIATHQTNVGNREEKIEYRREDDRFHTGYTVTDSLKSV 714
Query: 342 ERL---RFAD------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
E + +F D ++ + L G DV +
Sbjct: 715 EEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGG 774
Query: 393 EGRDIT---FDSYLY---LGSYDDLRNVFGSDRGAAARH 425
G DI D+ +Y G +D G A
Sbjct: 775 TGNDIISGGKDNDIYVHKTGDGNDSITDSGGQDKLAFSD 813
>gi|7416116|dbj|BAA93708.1| hemolysin A [Escherichia coli]
gi|157688256|gb|ABQ02445.1| enterohemolysin [Escherichia coli]
Length = 998
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 50/186 (26%), Gaps = 28/186 (15%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G + N I + + + G +D + G ++ F SGND G G + +
Sbjct: 721 NDIFHGADGNDYIEGNYGNDRLYGDDRDDYISGGQGDDQLFGGSGNDKLSGGDGNN--YL 778
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S ++ I+ +L+ +
Sbjct: 779 TGGSGNDELQAHGAYNILSGGT-----------------GDDKLYGGGGIDLLDGGEGND 821
Query: 370 DLIQVIGQDV----FESMKHFYEFGLSEGR-----DITFDSYLYLGSYDDLRNVFGSDRG 420
L G D+ H +G DI+FD + +DL +
Sbjct: 822 YLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLSDISFDDIAFKRVGNDLIMNKAINGV 881
Query: 421 AAARHY 426
+
Sbjct: 882 LSFNES 887
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 55/200 (27%), Gaps = 33/200 (16%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G ++ + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDRDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYR 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKAINGVLSFNESND 889
Query: 370 D----LIQVIGQDVFESMKH 385
+D + H
Sbjct: 890 VNGITFKNWFAKDASGADNH 909
Score = 45.5 bits (106), Expect = 0.025, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 56/197 (28%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDRDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKRVGNDLI 873
>gi|85705844|ref|ZP_01036940.1| putative hemolysin-adenlyate cyclase protein [Roseovarius sp. 217]
gi|85669432|gb|EAQ24297.1| putative hemolysin-adenlyate cyclase protein [Roseovarius sp. 217]
Length = 844
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/254 (16%), Positives = 71/254 (27%), Gaps = 23/254 (9%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV----------V 272
+D DL G+ + T+ S+ G + T+A +++
Sbjct: 537 FDDALVSAADLINGAGIPGEEIVGTDGDDSLIGTVNDDTLAGGAGNDNIDSGGGGNNNVS 596
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS GND + G ++ G+D G+ G D + + + A
Sbjct: 597 GSDGNDTLFGGPGDDSIGGGFGDDTIFGNDGNDVL----GAGVGNDFASGGNGNDVVAGG 652
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D L E ++ +D+ G+D ++ G
Sbjct: 653 ANDDTLEGGE------GNDSMSGSFGNDLIFGNGGADDIGGGTGRDTIDAGAGDDSVGGG 706
Query: 393 EGRDITFDSYLYL---GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
EG D G D G+ + G D F +
Sbjct: 707 EGDDSILGGDGSDFLAGGGRDDIIDGGAGNDTINAGAGNDVITGGTGVDQFVFASFFEGE 766
Query: 450 EDLINAFADAPDLV 463
D++ F D D
Sbjct: 767 ADVVTDFEDGIDSF 780
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 54/389 (13%), Positives = 97/389 (24%), Gaps = 59/389 (15%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIA----- 263
+ + + T+ G D L G + +L T + + G TIA
Sbjct: 396 DESFRVAGGNDTVDGGAGFDRLRYDDFGVTQVNANLATGIVTGTANGLAFTDTIANIEWL 455
Query: 264 -QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
T + ++G + + G + ++ GND DG G DT ++
Sbjct: 456 RGSTGDDILIGDDAANRLQGRAGDDRLVGGLGNDTIDGEGGTDTAVLAVNRADTQVSAIN 515
Query: 323 NAIIVYDANEHKQDFLSDVERLRF-----------------------ADQCIDSVNVKQR 359
I + + DF + VE +F D +
Sbjct: 516 GGIRII--SSAGTDFFTSVELFQFDDALVSAADLINGAGIPGEEIVGTDGDDSLIGTVND 573
Query: 360 SILEYTASYE-------------------DLIQVIGQDVFESMKHFYEFGLSEGRDIT-- 398
L A + L G D ++G D+
Sbjct: 574 DTLAGGAGNDNIDSGGGGNNNVSGSDGNDTLFGGPGDDSIGGGFGDDTIFGNDGNDVLGA 633
Query: 399 --FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
+ + G+ +D+ +D G + +D+
Sbjct: 634 GVGNDFASGGNGNDVVAGGANDDTLE----GGEGNDSMSGSFGNDLIFGNGGADDIGGGT 689
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
G D ++ S G D G+ +
Sbjct: 690 GRDTIDAGAGDDSVGGGEGDDSILGGDGSDFLAGGGRDDIIDGGAGNDTINAGAGNDVIT 749
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPD 545
G D F + D++ F D D
Sbjct: 750 GGTGVDQFVFASFFEGEADVVTDFEDGID 778
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 88/274 (32%), Gaps = 8/274 (2%)
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTS 161
+ D D + T+ I G + S + G ++
Sbjct: 559 VGTDGDDSLIGTVNDDTLAGGAGNDNIDSGGGGNNNVSGSDGNDTLFGGPGDDSIGGGFG 618
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT 221
+ F + + + + V GA +L + S
Sbjct: 619 DDTIFGNDGNDVLGAGVGNDFASGGNGNDVVA-GGANDDTLEGG--EGNDSMSGSFGNDL 675
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I+ +GG D + G ++ ID S+GG E + +I + + G +D++
Sbjct: 676 IFGNGGADDI---GGGTGRDTIDAGAG-DDSVGGGEGDDSILGGDGSDFLAGGGRDDIID 731
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G + N+ +GNDV G +G+D F + + + + + D + V
Sbjct: 732 GGAGNDTINAGAGNDVITGGTGVDQFVFASFFEGEADVVTDFEDGIDSFFIRRVDPDTGV 791
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
E + + V +I++ A + +
Sbjct: 792 ENIT-NGGNGLAGFVAAMNIVDTAAGAQMTVNGN 824
Score = 40.2 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 46/338 (13%), Positives = 84/338 (24%), Gaps = 52/338 (15%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY--YAP 312
G N + + + G G+D++ G N+ +GND G +G D P
Sbjct: 173 GTPGNDDLLGGIGNDMLNGLDGDDLLDGAGGNDTLDGGAGNDQLTGGAGNDLIRTGENNP 232
Query: 313 SYLYKIYRFENAIIVYDA---------------------------------NEHKQDFLS 339
+ + V D
Sbjct: 233 DFGDVVIGGSGNDTVDFGGLVDGFVEVSYGGLATPIIATVDGVANTGTVTKGALGTDTFV 292
Query: 340 DVERLRFAD---QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
DVE F+ + I + + I V G + +
Sbjct: 293 DVENPMFSGFLNGGLRIRGTAGDDIFSFNTASNQWISVRGN----GGSDTFNLTGAGLVQ 348
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
+ F + V G+ + V E R + +L A+ E A
Sbjct: 349 LDFRGTAVTADF-----VAGTVTQGGNISTVNGTVFEIRTGNESDSLLGSAADESFRVAG 403
Query: 457 ADAPDLVQVGKD--HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ G D + +FG + + + ++ + G
Sbjct: 404 GNDTVDGGAGFDRLRYDDFGVTQVNANLATGIVTGTANGLAFTDTIANIEWLR---GSTG 460
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
DA L+ A + L+ + + G D
Sbjct: 461 DDILIGDDAANRLQGRAGDDRLVGGLGNDTIDGEGGTD 498
>gi|291518071|emb|CBK73292.1| hypothetical protein CIY_03380 [Butyrivibrio fibrisolvens 16/4]
Length = 312
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
F A Y ++ D++ A + P ++ +H+ N G EGR S TFN +Y + DL
Sbjct: 52 FDAKYYAQAYPDVVAALGNDPAVL---LNHYVNNGIYEGRDASATFNMSVYALANPDLVT 108
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLY 640
FGS+ A HY+T G+KE R + K + D S + + +
Sbjct: 109 AFGSNYQAFINHYVTSGIKENRVAS-ADALLKQGPKAIATLAQQNDQIKSTSNITGNTF 166
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ Y +Y D+ G+D HY+ +G+ EGR+ A F Y ++ DL+ AF
Sbjct: 52 FDAKYYAQAYPDVVAALGNDPAVLLNHYVNNGIYEGRDASATFNMSVYALANPDLVTAFG 111
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSITFNP 569
QA +H+ G +E R + +
Sbjct: 112 SN---YQAFINHYVTSGIKENRVASADA 136
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLR 496
F A Y ++ D++ A + V +H+ N G EGR TF+ +Y + DL
Sbjct: 51 VFDAKYYAQAYPDVVAALGND---PAVLLNHYVNNGIYEGRDASATFNMSVYALANPDLV 107
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDA 523
FGS+ A HY+T G+KE R A
Sbjct: 108 TAFGSNYQAFINHYVTSGIKENRVASA 134
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVF 415
Y +Y D++ +G D + H+ G+ EGRD TF+ +Y + DL F
Sbjct: 51 VFDAKYYAQAYPDVVAALGNDPAVLLNHYVNNGIYEGRDASATFNMSVYALANPDLVTAF 110
Query: 416 GSDRGAAARHYITHGVKEGR 435
GS+ A HY+T G+KE R
Sbjct: 111 GSNYQAFINHYVTSGIKENR 130
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 457
FD+ Y +Y D+ G+D HY+ +G+ EGR+ F Y ++ DL+ AF
Sbjct: 52 FDAKYYAQAYPDVVAALGNDPAVLLNHYVNNGIYEGRDASATFNMSVYALANPDLVTAFG 111
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
Q +H+ G +E R + D+
Sbjct: 112 SN---YQAFINHYVTSGIKENRVASADAL 137
>gi|19424154|ref|NP_598198.1| stromelysin-2 precursor [Rattus norvegicus]
gi|116870|sp|P07152|MMP10_RAT RecName: Full=Stromelysin-2; Short=SL-2; AltName: Full=Matrix
metalloproteinase-10; Short=MMP-10; AltName:
Full=Transformation-associated protein 34A; AltName:
Full=Transin-2; Flags: Precursor
gi|57389|emb|CAA28739.1| unnamed protein product [Rattus norvegicus]
gi|207151|gb|AAA42202.1| transformation-associated protein [Rattus norvegicus]
Length = 476
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 59/195 (30%), Gaps = 49/195 (25%)
Query: 25 NYFIRY-KPDVLTTHRLSFDITELN-----PNAQEVARWALGEWSKVVDLTFEETSIH-S 77
F + + +S+ I + AL W +V LTF S +
Sbjct: 98 GGFSTFPGSPKWRKNHISYRIVNYTLDLPRESVDSAIERALKVWEEVTPLTFSRISEGEA 157
Query: 78 DIKFISS---------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + + + P ++ + +FD + W G GT L
Sbjct: 158 DIMISFAVGEHGDFYPFDGVGQSLAHAYPP--GPGFYGDAHFDDDEKWSLGP-SGTNLFL 214
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE+GH+LGL H + + + +
Sbjct: 215 VAAHELGHSLGLFHSNNKESLMYPVYRFSTSQANIR------------------------ 250
Query: 183 PMVSDIVAVQKIYGA 197
DI +Q +YGA
Sbjct: 251 LSQDDIEGIQSLYGA 265
>gi|303253084|ref|ZP_07339234.1| RTX-III toxin determinant A from serotype 8 [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248361|ref|ZP_07530384.1| Hemolysin, plasmid [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|302648069|gb|EFL78275.1| RTX-III toxin determinant A from serotype 8 [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306855099|gb|EFM87279.1| Hemolysin, plasmid [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
Length = 1050
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 11/130 (8%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G+D++ GN +++ + GND G +G D + K+ + +
Sbjct: 754 GADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLY--GGEGDDKLLGGNGNNYLSGGDG 811
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH--FYEFG 390
+ E + K L ++ + L G D E FY +
Sbjct: 812 -------NDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYR 864
Query: 391 LSEGRDITFD 400
+ G +D
Sbjct: 865 STSGNHTIYD 874
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 6/120 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTI- 262
+ + +Y G+D L GG + L + + G + N +
Sbjct: 757 GDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGDDKLLGGNGNNYLSGGDGNDELQ 816
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G G+D + G+S +++ GND +G G D + Y + S + IY
Sbjct: 817 VLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYRSTSGNHTIYDQG 876
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/258 (15%), Positives = 69/258 (26%), Gaps = 45/258 (17%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT--FFYYAPSYL----YKIYRFENAIIV 327
+GND V + + G+DV DT Y + R +
Sbjct: 629 GNGNDKVFLAAGSAEIHAGEGHDVVYY-DKTDTGLLVIDGTKATEQGRYSVTRELSGATK 687
Query: 328 Y------------------------------DANEHKQDFLSDVERLRFADQCIDSVNVK 357
++N D L VE + ++Q + K
Sbjct: 688 ILREVIKNQKSAVGKREETLEYRDYELTQSGNSNLKAHDELHLVEEIIGSNQRDEFKGSK 747
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRN 413
R I + L G D+ K E G D + D L G+ ++ +
Sbjct: 748 FRDIFHGADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGDDKLLGGNGNNYLS 807
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ + ++ G+ Y +S DL++ L F +
Sbjct: 808 GGDGNDELQVLGNGFNVLRGGKG----DDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVY 863
Query: 474 GCEEGRFVTFDSYLYLGS 491
G +D S
Sbjct: 864 RSTSGNHTIYDQGKASDS 881
>gi|118201529|gb|ABK79673.1| hemolysin toxin protein [Escherichia coli O157:H7]
gi|118724616|gb|ABL10878.1| hemolysin toxin protein A [Escherichia coli]
Length = 998
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 34/216 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYG 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKAINGVLSFNESND 889
Query: 370 D----LIQVIGQDVFESMKHFYE-FGLSEGRDITFD 400
+D + H E +GR+I D
Sbjct: 890 VNGITFKNWFAKDASGADNHLVEVITDKDGREIKVD 925
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 46/164 (28%), Gaps = 19/164 (11%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G I +E ++G +D G N++F + GND +G+ G D +
Sbjct: 685 FEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLY- 743
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + ++ + D LS D L+ +Y
Sbjct: 744 -GDDGDDYISGGQGDDQLFGGS--GNDKLSG------GDGNNYLTGGSGNDELQAHGAYN 794
Query: 370 DLIQVIGQDVFE---------SMKHFYEFGLSEGRDITFDSYLY 404
L G D + G DI Y
Sbjct: 795 ILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNY 838
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 55/197 (27%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKRVGNDLI 873
Score = 44.4 bits (103), Expect = 0.059, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 62/236 (26%), Gaps = 29/236 (12%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----AIIVYDANEHK------- 334
++V + +G+ G DT Y + N +
Sbjct: 605 DDVVYSGAGSSEVFAGEGYDTVSYNKTDVGKLTIDATGASKPGEYIVSKNMYGDVKVLQE 664
Query: 335 ------QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
E++++ D + +++ S E+LI D F+ K
Sbjct: 665 VVKEQEVSVGKRTEKIQYRDFEFRTGG-IPYDVIDNLHSVEELIGGKHDDEFKGGKFNDI 723
Query: 389 FGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRGAAARH-----YITHGVKEGRNPDA 439
F ++G D + LY DD + D G
Sbjct: 724 FHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSG 783
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYD 493
L+ ++ L D G D + F D Y+Y +Y
Sbjct: 784 NDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNYG 839
>gi|26354522|dbj|BAC40889.1| unnamed protein product [Mus musculus]
Length = 462
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 59/185 (31%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 102 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 161
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 162 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 218
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S + Y P DI +Q
Sbjct: 219 LQHSNNPK---------------SIMYPTYRYLNPST----------FRLSADDIRNIQS 253
Query: 194 IYGAP 198
+YGAP
Sbjct: 254 LYGAP 258
>gi|10955283|ref|NP_052624.1| hemolysin A [Escherichia coli O157:H7 str. Sakai]
gi|75994494|ref|YP_325608.1| hemolysin toxin protein [Escherichia coli O157:H7 EDL933]
gi|149930759|ref|YP_001294700.1| w0036 [Escherichia coli]
gi|168763000|ref|ZP_02788007.1| hemolysin [Escherichia coli O157:H7 str. EC4501]
gi|168789921|ref|ZP_02814928.1| hemolysin [Escherichia coli O157:H7 str. EC869]
gi|217329839|ref|ZP_03445914.1| RTX C- domain protein [Escherichia coli O157:H7 str. TW14588]
gi|261225650|ref|ZP_05939931.1| w0036 [Escherichia coli O157:H7 str. FRIK2000]
gi|261257895|ref|ZP_05950428.1| w0036 [Escherichia coli O157:H7 str. FRIK966]
gi|37695747|gb|AAR00409.1|AF401292_10 w0036 [Escherichia coli]
gi|3337015|dbj|BAA31774.1| Hemolysin A [Escherichia coli O157:H7 str. Sakai]
gi|3822162|gb|AAC70116.1| hemolysin toxin protein [Escherichia coli O157:H7]
gi|157688254|gb|ABQ02444.1| enterohemolysin [Escherichia coli]
gi|189366754|gb|EDU85170.1| hemolysin [Escherichia coli O157:H7 str. EC4501]
gi|189370533|gb|EDU88949.1| hemolysin [Escherichia coli O157:H7 str. EC869]
gi|217317070|gb|EEC25503.1| RTX C- domain protein [Escherichia coli O157:H7 str. TW14588]
gi|320187890|gb|EFW62559.1| hemolysin A [Escherichia coli O157:H7 str. EC1212]
gi|326347641|gb|EGD71359.1| hemolysin A [Escherichia coli O157:H7 str. 1044]
Length = 998
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 34/216 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYG 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKAINGVLSFNESND 889
Query: 370 D----LIQVIGQDVFESMKHFYE-FGLSEGRDITFD 400
+D + H E +GR+I D
Sbjct: 890 VNGITFKNWFAKDASGADNHLVEVITDKDGREIKVD 925
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 46/164 (28%), Gaps = 19/164 (11%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G I +E ++G +D G N++F + GND +G+ G D +
Sbjct: 685 FEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLY- 743
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + ++ + D LS D L+ +Y
Sbjct: 744 -GDDGDDYISGGQGDDQLFGGS--GNDKLSG------GDGNNYLTGGSGNDELQAHGAYN 794
Query: 370 DLIQVIGQDVFE---------SMKHFYEFGLSEGRDITFDSYLY 404
L G D + G DI Y
Sbjct: 795 ILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNY 838
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 55/197 (27%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKRVGNDLI 873
Score = 44.4 bits (103), Expect = 0.058, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 62/236 (26%), Gaps = 29/236 (12%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----AIIVYDANEHK------- 334
++V + +G+ G DT Y + N +
Sbjct: 605 DDVVYSGAGSSEVFAGEGYDTVSYNKTDVGKLTIDATGASKPGEYIVSKNMYGDVKVLQE 664
Query: 335 ------QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
E++++ D + +++ S E+LI D F+ K
Sbjct: 665 VVKEQEVSVGKRTEKIQYRDFEFRTGG-IPYDVIDNLHSVEELIGGKHDDEFKGGKFNDI 723
Query: 389 FGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRGAAARH-----YITHGVKEGRNPDA 439
F ++G D + LY DD + D G
Sbjct: 724 FHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSG 783
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYD 493
L+ ++ L D G D + F D Y+Y +Y
Sbjct: 784 NDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNYG 839
>gi|332160892|ref|YP_004297469.1| putative hemolysin [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325665122|gb|ADZ41766.1| putative hemolysin [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 483
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 53/169 (31%), Gaps = 24/169 (14%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
S + D G + +IGG N I + ++ G N I H +
Sbjct: 125 NTTPSKSALLTDNDDFIGHKYIRNKVIGGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFD 184
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+ G GND++IG N+ +GND+ DG G D + +
Sbjct: 185 SLFGQDGNDILIGGEGNDGLTGGAGNDILDGGDGNDQL------------HGDADGLASF 232
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A+E K +E + + L G D
Sbjct: 233 ASESSWR------------GNDIIFGGKGNDRIEGEKNNDYLAGGTGND 269
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 44/149 (29%), Gaps = 17/149 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G+D++ G + + G E N +
Sbjct: 155 GNNIIQGGDKSDNLAGGAGNDII----FGHASFDSLFGQDGNDILIGGEGNDGLTGGAGN 210
Query: 269 ESVVGSSGNDVVIGNS-------------ANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + G GND + G++ N++ F GND +G D +
Sbjct: 211 DILDGGDGNDQLHGDADGLASFASESSWRGNDIIFGGKGNDRIEGEKNNDYLAGGTGNDS 270
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERL 344
Y ++ ++ + + + +
Sbjct: 271 YIFSAYDGINMIVEYSNEENTISINDHFF 299
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 51/191 (26%), Gaps = 46/191 (24%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + I + V+G GN+++ G ++ +GND+ G + D+ F
Sbjct: 135 TDNDDFIGHKYIRNKVIGGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFDSLF------- 187
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
IL + L
Sbjct: 188 ---------------------------------------GQDGNDILIGGEGNDGLTGGA 208
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D+ + + +F S D + G+DR ++ G
Sbjct: 209 GNDILDGGDGNDQLHGDADGLASFASESSWRGNDIIFGGKGNDRIEGEKNNDYLAGGTGN 268
Query: 436 NPDAFKALEYI 446
+ F A + I
Sbjct: 269 DSYIFSAYDGI 279
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 5/126 (3%)
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
++ D+ + I+ AS++ L G D+ + G DI
Sbjct: 155 GNNIIQGGDKSDNLAGGAGNDIIFGHASFDSLFGQDGNDILIGGEGNDGLTGGAGNDIL- 213
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
G +D + + A G +E +++ L +
Sbjct: 214 ----DGGDGNDQLHGDADGLASFASESSWRGNDIIFGGKGNDRIEGEKNNDYLAGGTGND 269
Query: 460 PDLVQV 465
+
Sbjct: 270 SYIFSA 275
>gi|254425151|ref|ZP_05038869.1| Glycerophosphoryl diester phosphodiesterase family [Synechococcus
sp. PCC 7335]
gi|196192640|gb|EDX87604.1| Glycerophosphoryl diester phosphodiesterase family [Synechococcus
sp. PCC 7335]
Length = 1008
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 55/189 (29%), Gaps = 22/189 (11%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE---------SSGNDVFDGS 301
+I G N T+A + + + GS G+DV+ G ++ F GND
Sbjct: 791 QTIVGTVGNDTLAGDRLDDQLTGSLGDDVIRGEVGDDQIFGDFDDSSTANGGGNDAIFAG 850
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G D + +Y IV +
Sbjct: 851 GGADEVV--GGAGDDILYGNPGMDIVLGGDGDDLLSGG--------LGDDLLDGGLGSDR 900
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ A + L+ G D+ K G DI + G D+ F S+
Sbjct: 901 IYGNAGRDMLVGGDGDDLLVGGKSIDTLFGGAGNDI---FAVETGRAADVIMDFSSEDSI 957
Query: 422 AARHYITHG 430
A +T G
Sbjct: 958 ALIGSLTFG 966
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 5/123 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + I+ GG D + D L G I L + + G + +
Sbjct: 835 DSSTANGGGNDAIFAGGGADEVVGGAGDDILYGNPGMDIVLGGDGDDLLSGGLGDDLLDG 894
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G++G D+++G +++ D G +G D F I F +
Sbjct: 895 GLGSDRIYGNAGRDMLVGGDGDDLLVGGKSIDTLFGGAGNDIFAVETGRAADVIMDFSSE 954
Query: 325 IIV 327
+
Sbjct: 955 DSI 957
Score = 40.5 bits (93), Expect = 0.84, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 60/243 (24%), Gaps = 52/243 (21%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++VG+ GND + G+ ++ S G+DV G G D F
Sbjct: 792 TIVGTVGNDTLAGDRLDDQLTGSLGDDVIRGEVGDDQIFGD------------------- 832
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
F D + + + G D
Sbjct: 833 ----------------FDDSSTANGG-----------GNDAIFAGGGADEVVGGAGDDIL 865
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+ G DI L + + R Y G D L S
Sbjct: 866 YGNPGMDIVLGGDGDDLLSGGLGDDLLDGGLGSDRIYGNAGRDMLVGGDGDDLLVGGKSI 925
Query: 450 EDLINAFADAPDL--VQVGKDHFSNFGCEEG----RFVTFDSYLYLGSYDDLRNVFGSDR 503
+ L + D +F E+ +TF + D+ G+D
Sbjct: 926 DTLFGGAGNDIFAVETGRAADVIMDFSSEDSIALIGSLTFGQLSFTTKGHDVLISVGNDE 985
Query: 504 GAA 506
A
Sbjct: 986 LAR 988
>gi|218439934|ref|YP_002378263.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7424]
gi|218172662|gb|ACK71395.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7424]
Length = 507
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 55/168 (32%), Gaps = 12/168 (7%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ + I GDD ++ G + +I G N I + + G
Sbjct: 334 GTSQRERINGFDGDDYIN----GRDGDDWIWGGYGKDTIIGGHGNDMIYAGPDDDIIYGG 389
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+D + G S ++ + G+D+ G G DT + + + + E
Sbjct: 390 KNDDRLFGGSGDDKIWGGQGDDLIRGGLGNDTLW------GDYTFEQQGQDRFVLSPEEG 443
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
D + D + D+ + + + ++ S + ++ +
Sbjct: 444 TDTIKDFQVQI--DKLVLEGGLDRTNLSITQHSNNTWVGLLNNQTTLA 489
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/195 (11%), Positives = 52/195 (26%), Gaps = 23/195 (11%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N ++ I G + + + E + G G+D + G ++ + G D G G D
Sbjct: 316 NEPNFDLIPGTDLGEQLIGTSQRERINGFDGDDYINGRDGDDWIWGGYGKDTIIGGHGND 375
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ A IY +N ++ + + ++
Sbjct: 376 MIY--AGPDDDIIYGGKNDDRLFGGS-----------------GDDKIWGGQGDDLIRGG 416
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ L + + + EG D D + + + +
Sbjct: 417 LGNDTLWGDYTFEQQ--GQDRFVLSPEEGTDTIKDFQVQIDK--LVLEGGLDRTNLSITQ 472
Query: 426 YITHGVKEGRNPDAF 440
+ + N
Sbjct: 473 HSNNTWVGLLNNQTT 487
>gi|307689106|ref|ZP_07631552.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 1018
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 66/193 (34%), Gaps = 43/193 (22%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ I G +++ I +++ G G+D +IG N++ + +G+D+ G G DT+
Sbjct: 559 GDNIIYGSDQDDIIFGFGGDDTIYGYGGDDQLIGGDGNDILYGGTGSDLLAGDEGSDTYI 618
Query: 309 YYAPSYLYKIYRFENAIIVYD------------------ANEHK---------------- 334
+ + I F+++ D N+
Sbjct: 619 FKKGDGMDFISEFDSSGKDIDTVKITDGILAKDVMLKRYGNDLGIEVKGTEDILIIMDYF 678
Query: 335 QDFLSDVERLRFADQC---------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
D VE++ F D I + +++ T + LI D F+ +
Sbjct: 679 VDSACQVEKIIFDDGTALDGGQIEVIVNGGGDVINVITGTDGNDTLIGTDKIDRFDGLTG 738
Query: 386 FYEFGLSEGRDIT 398
F +G DI
Sbjct: 739 NDTFIGDKGNDIY 751
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/341 (14%), Positives = 93/341 (27%), Gaps = 62/341 (18%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ ++ + GS+G+D++ S N++ GND GS+G DT+ + + I F
Sbjct: 280 LDGTEGVDIITGSTGDDIIYAYSGNDIIDGKGGNDYVTGSTGNDTYIFNKGYGVLTIDDF 339
Query: 322 ENAIIVYDANEHKQDFL---------------------------------------SDVE 342
+ + D + L + E
Sbjct: 340 DTTVGNMDTIKFGDGILPENILFVRVDKNLEITIKGSSDKIIIKDYFDVNFDINVNTRFE 399
Query: 343 RLRFADQCIDS-----------VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
++ FA+ + + IL + ++G D F K +
Sbjct: 400 KIEFANGVVWDSTIIVSQRVYTIGTSDDDILNGIDKVDIFDGLLGNDTFIGGKGNDIYIY 459
Query: 392 SE--GRDITFDSYLYLGSYDDLRNVFGSDRGAA----ARHYITHGVKEGRNPDAFKALEY 445
+ G D+ + G+ D + G D + +KE +
Sbjct: 460 NLNTGIKTIKDNDITGGNVDTIEFGVGIDPKNIVFTRVGDNLEISIKESSGKVIVENYYI 519
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL--YLGSYDDLRNVFGSDR 503
+ I FAD + +G + Y DD+ FG D
Sbjct: 520 GIENHIEIIKFADGTIWNDERINKQPVVIRGQGEIHGMEGDNIIYGSDQDDIIFGFGGDD 579
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
Y G + D L + L
Sbjct: 580 TI----YGYGGDDQLIGGDGNDILYGGTGSDLLAGDEGSDT 616
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 41/168 (24%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY----------------- 314
+G+ GND + G +++ GND+ G G DT+ + +
Sbjct: 848 IGTDGNDEIHGTGKDDIIDGHLGNDILIGGKGNDTYIFNLGTGIKIIEDIDVTIGNIDTI 907
Query: 315 ---------LYKIYRFENAIIVYDANEHKQDFLSD-------------VERLRFADQCID 352
R +N + + + + + +ER+ F +
Sbjct: 908 KFGTGIKPENIVFVRVDNNLEITIIGSSDKIIIKNYFDIDFNVKITNIIERIEFVGGIVW 967
Query: 353 SVNVKQRSILEYTASYED--LIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+++ Q I+ S D LI IG D+F+ F +G D
Sbjct: 968 DIDIIQSQIVHLIGSDNDDKLIGTIGVDIFDGHLGKDIFVGGKGNDTY 1015
Score = 44.4 bits (103), Expect = 0.071, Method: Composition-based stats.
Identities = 43/342 (12%), Positives = 82/342 (23%), Gaps = 48/342 (14%)
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
+ D+ G I +++ I G + G
Sbjct: 280 LDGTEGVDIITGSTGDDIIYAYSGNDIIDGKGGNDYVTGSTGNDTYIFNKGYGVLTIDDF 339
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ 220
M D + D I G+ + + + + + +
Sbjct: 340 DTTVGNMDTIKFGDGILPENILFVRVDKNLEITIKGSSDKIIIKDYFDVNFDINVNTRFE 399
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
I + G ++ I T + G +K ++ +G GND+
Sbjct: 400 KIEFANGVVWDSTIIVSQRVYTI--GTSDDDILNGIDKVDIFDGLLGNDTFIGGKGNDIY 457
Query: 281 IGNSA-------NNVFFESSGNDVFDGSSGLD--TFFYYAPSYLYKIYRFENAIIVYDAN 331
I N +N + D + G+D + +I E++ V N
Sbjct: 458 IYNLNTGIKTIKDNDITGGN-VDTIEFGVGIDPKNIVFTRVGDNLEISIKESSGKVIVEN 516
Query: 332 EHKQDFLSDVERLRFADQCI-----------------------------------DSVNV 356
+ + +E ++FAD I
Sbjct: 517 YY-IGIENHIEIIKFADGTIWNDERINKQPVVIRGQGEIHGMEGDNIIYGSDQDDIIFGF 575
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + LI G D+ EG D
Sbjct: 576 GGDDTIYGYGGDDQLIGGDGNDILYGGTGSDLLAGDEGSDTY 617
Score = 44.0 bits (102), Expect = 0.075, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 47/194 (24%), Gaps = 51/194 (26%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I V E + GS+G D + N++ G D+ G +G D + + I
Sbjct: 138 IVGTDVNEWIEGSTGKDDIEARGGNDIIDGRGGGDLSKGGTGSDIYIFNKGYGELIIEET 197
Query: 322 ENAIIVYDANEHK----------------------------------QDFLSDVERLRFA 347
I D +D +E + F
Sbjct: 198 AETIGNIDKIRFGKGINPDDVVFNKEGLNLIITIKGTTDKIVIVDYYKDLSLRIEEIDFF 257
Query: 348 DQCI-----------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
I + I+ + + + G D+ +
Sbjct: 258 GGVIWNKDDINARPVYILGSGKLDGTEGVDIITGSTGDDIIYAYSGNDIIDGKGGNDYVT 317
Query: 391 LSEGRDITFDSYLY 404
S G D + Y
Sbjct: 318 GSTGNDTYIFNKGY 331
Score = 38.6 bits (88), Expect = 3.9, Method: Composition-based stats.
Identities = 57/473 (12%), Positives = 128/473 (27%), Gaps = 86/473 (18%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ + +Y Y +D K YG +
Sbjct: 290 TGSTGDDIIYAYSGNDIIDGKGGNDYVTGSTGNDTYIFNKGYGVLTIDDFDTTVGNMDTI 349
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV---IES 270
K I +++L + + ++ I +++ ++ N I +T IE
Sbjct: 350 KFGDGILP------ENILFVRVDKNLEITIKGSSDKIIIKDYFDVNFDINVNTRFEKIEF 403
Query: 271 VVGSSGNDVVI--------GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
G + +I G S +++ D+FDG G DTF + +Y
Sbjct: 404 ANGVVWDSTIIVSQRVYTIGTSDDDILNGIDKVDIFDGLLGNDTFIGGKGNDIYIYNLNT 463
Query: 323 NAIIVYDANEHK--QDFL-----------------------------------------S 339
+ D + D + +
Sbjct: 464 GIKTIKDNDITGGNVDTIEFGVGIDPKNIVFTRVGDNLEISIKESSGKVIVENYYIGIEN 523
Query: 340 DVERLRFADQCI-----------------DSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+E ++FAD I + ++ +I+ + + + G D
Sbjct: 524 HIEIIKFADGTIWNDERINKQPVVIRGQGEIHGMEGDNIIYGSDQDDIIFGFGGDDTIYG 583
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ +G DI + D + + +I+ G++ D K
Sbjct: 584 YGGDDQLIGGDGNDILYGGTGSDLLAGDEGSDTYIFKKGDGMDFISEFDSSGKDIDTVKI 643
Query: 443 LEYIASHEDLINAFADAPDLVQVGKD------HFSNFGCEEGRFVTFDSYLYLGSYD-DL 495
+ I + + ++ + + + G + + + + FD L ++
Sbjct: 644 TDGILAKDVMLKRYGNDLGIEVKGTEDILIIMDYFVDSACQVEKIIFDDGTALDGGQIEV 703
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
G D T G D + + ++ I + ++
Sbjct: 704 IVNGGGDVINVIT--GTDGNDTLIGTDKIDRFDGLTGNDTFIGDKGNDIYVIN 754
>gi|295092519|emb|CBK78626.1| hypothetical protein [Clostridium cf. saccharolyticum K10]
Length = 198
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
FD+ Y +DL FG ++ H++T G+KEGR AF Y ++ DL+ AF
Sbjct: 117 FDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQAFG 176
Query: 542 DAPDLVQAGKDHFSNFGYEEGR 563
D A +H+ NFGY+E R
Sbjct: 177 DNL---PAYYEHYMNFGYDENR 195
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F A+ Y +EDL AF + + +HF G +EGR + FN +Y + DL
Sbjct: 117 FDAVYYADHNEDLYGAFGYNQEDL---LNHFLTSGMKEGRVASEAFNISVYKENNADLVQ 173
Query: 582 VFGSDRSAAAQHYITHGMKEGR 603
FG + A +HY+ G E R
Sbjct: 174 AFGDNLPAYYEHYMNFGYDENR 195
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVFG 416
+ Y EDL G + + + HF G+ EGR F+ +Y + DL FG
Sbjct: 117 FDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQAFG 176
Query: 417 SDRGAAARHYITHGVKEGR 435
+ A HY+ G E R
Sbjct: 177 DNLPAYYEHYMNFGYDENR 195
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
F A+ Y +EDL AF + +HF G +EGR + F+ +Y +
Sbjct: 112 HIDRIFDAVYYADHNEDLYGAFG---YNQEDLLNHFLTSGMKEGRVASEAFNISVYKENN 168
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGR 519
DL FG + A HY+ G E R
Sbjct: 169 ADLVQAFGDNLPAYYEHYMNFGYDENR 195
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-NPDAFKALEYIASHEDLIN 454
D FD+ Y +DL FG ++ H++T G+KEGR +AF Y ++ DL+
Sbjct: 114 DRIFDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVASEAFNISVYKENNADLVQ 173
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGR 479
AF D +H+ NFG +E R
Sbjct: 174 AFGDNLPAY---YEHYMNFGYDENR 195
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALG 606
F+ Y +DL+ FG ++ H++T GMKEGR
Sbjct: 116 IFDAVYYADHNEDLYGAFGYNQEDLLNHFLTSGMKEGRVAS 156
>gi|145297882|ref|YP_001140723.1| RTX protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|142850654|gb|ABO88975.1| RTX protein [Aeromonas salmonicida subsp. salmonicida A449]
Length = 3195
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 48/138 (34%), Gaps = 3/138 (2%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG N I + G N + + +++ G SGND + G S N+ + +GND
Sbjct: 2998 GGEGNDILFGQGGDDFLFGGAGNDILFGGSGNDTLYGESGNDTLYGGSGNDTLYGGAGND 3057
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-YDANEHKQDFLSDVERLRFADQCIDSVN 355
G G D + A + + ++ + F+ D ++
Sbjct: 3058 TLSGGLGNDILV--GGLGNDILKGDAGADTFTWLQGDTTGGTIAKDYVVDFSRAEGDKLD 3115
Query: 356 VKQRSILEYTASYEDLIQ 373
+ + + + DL
Sbjct: 3116 LSDLLDHDGSHNQNDLKG 3133
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 9/97 (9%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G E N + + + G +GND++ G S N+ + SGND G SG DT +
Sbjct: 2994 DVLIGGEGNDILFGQGGDDFLFGGAGNDILFGGSGNDTLYGESGNDTLYGGSGNDTLY-- 3051
Query: 311 APSYLYKIYRFENAIIVYDA-------NEHKQDFLSD 340
+ + I+ + D +
Sbjct: 3052 GGAGNDTLSGGLGNDILVGGLGNDILKGDAGADTFTW 3088
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 63/214 (29%), Gaps = 16/214 (7%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
Y + D + + +V D+ AV GN I + ++
Sbjct: 2284 YASIGYQISDGANLSNGSKLVIDVAAVADKPTVNVTLTGNGIPSYSPSFPSASITTELFQ 2343
Query: 225 SGGDD------LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG-- 276
SG + L + + N+ + + + + + +VG +
Sbjct: 2344 SGNFNKTAFGITNSLADSSSGQEQVLGNSGNDYIVSTHGGGDLLYGQGGNDVLVGGNATQ 2403
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII--------VY 328
D + G N+V G+D G +G D Y I + + V
Sbjct: 2404 GDSLYGGDGNDVLVSGLGSDGLYGGAGTDIAVLTGNRADYTIKKGSGYSVNDRWFDFSVT 2463
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ L DVE ++FAD L
Sbjct: 2464 EKGAGITKALHDVEYVQFADGIYQLNQSTGELTL 2497
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 41/279 (14%), Positives = 80/279 (28%), Gaps = 28/279 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
Q + +G +D IG + DL S I+ +
Sbjct: 2858 GNSDQNARDGYALLIAAG--VTVDAIGIGDQLSVDDL-KGFDSDGKVLTG---ISADGLA 2911
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS----GLDTFFYYAPSYLYKIYRFENA 324
+++G+ V + +G+D+ G + G++ Y A +
Sbjct: 2912 NAILGTP----VSNLPGTDRLDGGAGDDILFGDAVHFAGINGEGYAAVKQYVAGKLSAGS 2967
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ +++ S+ ++ D+ + + IL + L G D+
Sbjct: 2968 VTDAQVHDYISSHASEFDQSSANDKGDVLIGGEGNDILFGQGGDDFLFGGAGNDILFGGS 3027
Query: 385 HFYEFGLSEGRDITF----DSYLYLGSYDD----------LRNVFGSDRGAAARHYITHG 430
G D + + LY G+ +D L G+D T
Sbjct: 3028 GNDTLYGESGNDTLYGGSGNDTLYGGAGNDTLSGGLGNDILVGGLGNDILKGDAGADTFT 3087
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+G A +Y+ D DL+ H
Sbjct: 3088 WLQGDTTGGTIAKDYVVDFSRAEGDKLDLSDLLDHDGSH 3126
Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 36/254 (14%), Positives = 64/254 (25%), Gaps = 20/254 (7%)
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
DG G + + + A D + ++L D
Sbjct: 2842 DGKGGYEAVTLSGDRDGNSDQNARDGYALLIAAGVTVDAIGIGDQLSVDD----LKGFDS 2897
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ S + L I ++ G DI F ++ +
Sbjct: 2898 DGKVLTGISADGLANAILGTPVSNLPGTDRLDGGAGDDILFGDAVHF-------AGINGE 2950
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
AA + Y+ + G DA + + + A+ V +G + + G
Sbjct: 2951 GYAAVKQYVAGKLSAGSVTDAQVHDYISSHASEFDQSSANDKGDVLIGGEGNDILFGQGG 3010
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
F D L G+D Y G L A ++ L
Sbjct: 3011 DDFLFG----GAGNDILFGGSGNDTL-----YGESGNDTLYGGSGNDTLYGGAGNDTLSG 3061
Query: 539 AFADAPDLVQAGKD 552
+ + G D
Sbjct: 3062 GLGNDILVGGLGND 3075
>gi|157818495|ref|NP_001100269.1| matrix metalloproteinase-27 [Rattus norvegicus]
gi|149020724|gb|EDL78529.1| matrix metalloproteinase 27 (predicted) [Rattus norvegicus]
Length = 511
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/194 (24%), Positives = 60/194 (30%), Gaps = 51/194 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T D+ E + AL WSKV L F S +DI
Sbjct: 106 WRKYNLTYRIMNYTPDMTHADVDE-------AIQKALQVWSKVTPLMFTRISKGVADIMI 158
Query: 82 ISSNN----------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
G+ P FD+ + W G G+G L A
Sbjct: 159 AFRTRVHGWCPRHFDGPLGVLGHAFPPGLGLGGDTH--FDEDETWTTGDGEGFNLFLVAA 216
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GH+LGL H V D Y + QD
Sbjct: 217 HEFGHSLGLSHSSDQTALMFPNYVSLDP---------NKYPLSQD--------------- 252
Query: 186 SDIVAVQKIYGAPK 199
DI +Q IYG+P
Sbjct: 253 -DINGIQSIYGSPS 265
>gi|71060081|emb|CAJ18584.1| Mmp12 [Mus musculus]
Length = 462
Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 62/185 (33%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 102 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 161
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 162 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 218
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H P +D Y + T +S DI +Q
Sbjct: 219 LQHS-----NNPKSIMDPTYRYLNPNTFRLS--------------------ADDIRNIQS 253
Query: 194 IYGAP 198
+YGAP
Sbjct: 254 LYGAP 258
>gi|301773282|ref|XP_002922067.1| PREDICTED: matrilysin-like [Ailuropoda melanoleuca]
Length = 267
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 60/198 (30%), Gaps = 50/198 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + + Y+ T + +L AL WS+ + L+F + +DI
Sbjct: 104 WVSSVVTYRIVSYTPDLPRVRVNQL-------VAKALAMWSQEIPLSFRRVLAGTADIMI 156
Query: 82 IS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ + P + +FD+ + W G G A H
Sbjct: 157 SFARGAHGDYNPFDGPGNTLAHAFAP--GPGLGGDAHFDEDEHWTDGSRTGVNFLITATH 214
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H N + P++
Sbjct: 215 ELGHSLGLGHSSDPNA---------------VMYPAYRVGDPKN----------FKLAPD 249
Query: 187 DIVAVQKIYGAPKGSLGN 204
DI ++K+YG S N
Sbjct: 250 DIKGIRKLYGEKSNSTAN 267
>gi|168750734|ref|ZP_02775756.1| hemolysin [Escherichia coli O157:H7 str. EC4113]
gi|168757314|ref|ZP_02782321.1| hemolysin [Escherichia coli O157:H7 str. EC4401]
gi|168769222|ref|ZP_02794229.1| hemolysin [Escherichia coli O157:H7 str. EC4486]
gi|168769332|ref|ZP_02794339.1| hemolysin [Escherichia coli O157:H7 str. EC4486]
gi|168776705|ref|ZP_02801712.1| hemolysin [Escherichia coli O157:H7 str. EC4196]
gi|168783053|ref|ZP_02808060.1| hemolysin [Escherichia coli O157:H7 str. EC4076]
gi|168802569|ref|ZP_02827576.1| hemolysin [Escherichia coli O157:H7 str. EC508]
gi|195940107|ref|ZP_03085489.1| hemolysin A [Escherichia coli O157:H7 str. EC4024]
gi|208811292|ref|ZP_03253052.1| RTX domain protein [Escherichia coli O157:H7 str. EC4206]
gi|208817372|ref|ZP_03258401.1| hemolysin [Escherichia coli O157:H7 str. EC4045]
gi|208823372|ref|ZP_03263689.1| hemolysin [Escherichia coli O157:H7 str. EC4042]
gi|209395598|ref|YP_002268404.1| RTX C- domain protein [Escherichia coli O157:H7 str. EC4115]
gi|254667466|ref|YP_003082152.1| hemolysin toxin protein [Escherichia coli O157:H7 str. TW14359]
gi|157688264|gb|ABQ02449.1| enterohemolysin [Escherichia coli]
gi|187767936|gb|EDU31780.1| hemolysin [Escherichia coli O157:H7 str. EC4196]
gi|188015113|gb|EDU53235.1| hemolysin [Escherichia coli O157:H7 str. EC4113]
gi|188999577|gb|EDU68563.1| hemolysin [Escherichia coli O157:H7 str. EC4076]
gi|189355643|gb|EDU74062.1| hemolysin [Escherichia coli O157:H7 str. EC4401]
gi|189361601|gb|EDU80020.1| hemolysin [Escherichia coli O157:H7 str. EC4486]
gi|189361721|gb|EDU80140.1| hemolysin [Escherichia coli O157:H7 str. EC4486]
gi|189375462|gb|EDU93878.1| hemolysin [Escherichia coli O157:H7 str. EC508]
gi|208729922|gb|EDZ79139.1| RTX domain protein [Escherichia coli O157:H7 str. EC4206]
gi|208730549|gb|EDZ79248.1| hemolysin [Escherichia coli O157:H7 str. EC4045]
gi|208736967|gb|EDZ84652.1| hemolysin [Escherichia coli O157:H7 str. EC4042]
gi|209157053|gb|ACI34487.1| RTX C- domain protein [Escherichia coli O157:H7 str. EC4115]
gi|254595818|gb|ACT75178.1| hemolysin toxin protein [Escherichia coli O157:H7 str. TW14359]
gi|326337143|gb|EGD60979.1| hemolysin A [Escherichia coli O157:H7 str. 1125]
Length = 998
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 34/216 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYG 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKAINGVLSFNESND 889
Query: 370 D----LIQVIGQDVFESMKHFYE-FGLSEGRDITFD 400
+D + H E +GR+I D
Sbjct: 890 VNGITFKNWFAKDASGADNHLVEVITDKDGREIKVD 925
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 46/164 (28%), Gaps = 19/164 (11%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G I +E ++G +D G N++F + GND +G+ G D +
Sbjct: 685 FEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLY- 743
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + ++ + D LS D L+ +Y
Sbjct: 744 -GDDGDDYISGGQGDDQLFGGS--GNDKLSG------GDGNNYLTGGSGNDELQAHGAYN 794
Query: 370 DLIQVIGQDVFE---------SMKHFYEFGLSEGRDITFDSYLY 404
L G D + G DI Y
Sbjct: 795 ILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNY 838
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 55/197 (27%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKRVGNDLI 873
Score = 44.4 bits (103), Expect = 0.060, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 62/236 (26%), Gaps = 29/236 (12%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----AIIVYDANEHK------- 334
++V + +G+ G DT Y + N +
Sbjct: 605 DDVVYSGAGSSEVFAGEGYDTVSYNKTDVGKLTIDATGASKPGEYIVSKNMYGDVKVLQE 664
Query: 335 ------QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
E++++ D + +++ S E+LI D F+ K
Sbjct: 665 VVKEQEVSVGKRTEKIQYRDFEFRTGG-IPYDVIDNLHSVEELIGGKHDDEFKGGKFNDI 723
Query: 389 FGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRGAAARH-----YITHGVKEGRNPDA 439
F ++G D + LY DD + D G
Sbjct: 724 FHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSG 783
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYD 493
L+ ++ L D G D + F D Y+Y +Y
Sbjct: 784 NDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNYG 839
>gi|85704270|ref|ZP_01035373.1| extracellular nuclease [Roseovarius sp. 217]
gi|85671590|gb|EAQ26448.1| extracellular nuclease [Roseovarius sp. 217]
Length = 1682
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 8/125 (6%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G K I L + G N + + + + G +G D + G+ N+ +G+D
Sbjct: 20 GTDKRDILLGFGGDDILSGGGGNDLLLAGSGNDILDGGTGQDALHGDRGNDSLAGGAGDD 79
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFEN--------AIIVYDANEHKQDFLSDVERLRFAD 348
G G DT Y Y+I + + + D L+ VE L FA
Sbjct: 80 FLSGGRGFDTAVYQGGIDDYQISVRGGWFGRTATVSSVTATVADAGHDRLTGVEALYFAA 139
Query: 349 QCIDS 353
+
Sbjct: 140 DDLTI 144
>gi|317050412|ref|YP_004111528.1| Hemolysin-type calcium-binding region [Desulfurispirillum indicum
S5]
gi|316945496|gb|ADU64972.1| Hemolysin-type calcium-binding region [Desulfurispirillum indicum
S5]
Length = 1296
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G++GND +IG S N++F S+G+D+ DG G++T Y LY++
Sbjct: 780 DAITGTAGNDNLIGTSNNDIFIGSAGDDIIDGVGGVNTVVYVGNHTLYQVIDNGGGSYTV 839
Query: 329 DANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQ 373
+ D L++++ L F D Q I ++ +I+ +D
Sbjct: 840 VKPD-GTDTLTNIQYLSFGDVQNIAITDLLSENIVVIDCGMDDCSW 884
>gi|317484308|ref|ZP_07943231.1| hypothetical protein HMPREF0179_00582 [Bilophila wadsworthia 3_1_6]
gi|316924452|gb|EFV45615.1| hypothetical protein HMPREF0179_00582 [Bilophila wadsworthia 3_1_6]
Length = 3916
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/365 (14%), Positives = 109/365 (29%), Gaps = 17/365 (4%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
++ + TP + + +G T H G H +Y
Sbjct: 3560 IVNDGHATAMTPAGEDSLSVSFMGTGTPPADMDLGNLTPGMAQGDHLPGMDAD-GHQLAY 3618
Query: 141 NGGYPVYGV-DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
V G ++ + F Y D+ D ++ A+++ +G
Sbjct: 3619 AFDKAVDGNIQGEFGSLHFNAETGQYTYTLDTSEDGLHKLAQA--QANGSALKESFG--Y 3674
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
G+ + + + + T G D L + + I G N
Sbjct: 3675 TVSGHEGHSNGSLEINLTDLHTQLGHAGADTLG--DQTAAHSQVIFGEGGDDVIHGGAGN 3732
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY----- 314
+ + + G +G+D++ G + N+ +G++ G +G D Y
Sbjct: 3733 DWLFGGEGDDQIFGGTGDDILYGGAGNDYLDGGTGHNSLYGGAGNDILVYNQGMAHASGG 3792
Query: 315 ---LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + ++ + AN SD+E L + S+ + D
Sbjct: 3793 EGIDFLVGAEKDTLDSLFANPDNNPIQSDIEVLITSKPDSLSLTNLDDLKSIGISIEGDK 3852
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+ + G ++ E G+S G F + G L A+ + + +
Sbjct: 3853 LHLSGDWAPTAIGG-EEHGISLGNYAEFTHHSDHGDITILVQSGTPATDDLAQQIVQNTL 3911
Query: 432 KEGRN 436
G+
Sbjct: 3912 NHGQG 3916
>gi|47227660|emb|CAG09657.1| unnamed protein product [Tetraodon nigroviridis]
Length = 401
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 14/112 (12%)
Query: 52 QEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYV-CTPRYDSRYF---------- 99
+ V R AL WS V LTF E S +DI+ + + P
Sbjct: 54 RRVFREALKIWSDVTPLTFTEIHSGKADIRIDFTRYWHGDNLPFDGPGGILAHAFFPKTH 113
Query: 100 --MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+I+FD + W G GT L A HE GH LGL H Y
Sbjct: 114 RQGDIHFDYDESWTLGNHMGTDLLQVAAHEFGHVLGLQHSREPGAIMSAYYS 165
>gi|307307668|ref|ZP_07587400.1| putative calcium-binding exported protein [Sinorhizobium meliloti
BL225C]
gi|306901794|gb|EFN32395.1| putative calcium-binding exported protein [Sinorhizobium meliloti
BL225C]
Length = 387
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/315 (13%), Positives = 83/315 (26%), Gaps = 22/315 (6%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
M + + +++ G+ +D + G ++++ + GND G G D Y
Sbjct: 1 MILKGTNLSDTIRGALSDDELWGYASDDYLDGAEGNDKLFGGDGNDFIVGGLGDD----Y 56
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D L IL+ ++ ++ G D
Sbjct: 57 AEGGTGNDRFDGGLGHDTLKG------GLGNDILDGGDGSDILDGGDGHDQILGGRGHDK 110
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH-------YITHGVK 432
+G DI + G + + G A Y G
Sbjct: 111 IFGGAGEEYIDAGDGDDIIYAGSGDDGFNNRVNPATGQVTQQAVAGGAGHDKIYGEEGND 170
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ + ++ + + G D + G + + +
Sbjct: 171 ALKGQSGNDWVYGGIGNDIVDGGDGNNYLDGGDGNDVLDSEGGIDEAHGGTGNDKIVVGA 230
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D R VFG D Y G + + + ++ L + +AG D
Sbjct: 231 GDDR-VFGDDGDDML--YGEAGNDSLSGGNNYDRIFGGDGNDTLRGDAGRDVLIGEAGTD 287
Query: 553 HFSNFGYEEGRSITF 567
+G + F
Sbjct: 288 --ILWGGADSDRFVF 300
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 83/300 (27%), Gaps = 11/300 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLT-----LIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + ++ DD LD L GG N + G N
Sbjct: 8 LSDTIRGALSDDELWGYASDDYLDGAEGNDKLFGGDGNDFIVGGLGDDYAEGGTGNDRFD 67
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------YYAPSYLYK 317
+++ G GND++ G +++ G+D G G D F Y
Sbjct: 68 GGLGHDTLKGGLGNDILDGGDGSDILDGGDGHDQILGGRGHDKIFGGAGEEYIDAGDGDD 127
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
I + ++ + + + + L+ + + + IG
Sbjct: 128 IIYAGSGDDGFNNRVNPATGQVTQQAVAGGAGHDKIYGEEGNDALKGQSGNDWVYGGIGN 187
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D+ + +G D+ ++ N R + G
Sbjct: 188 DIVDGGDGNNYLDGGDGNDVLDSEGGIDEAHGGTGNDKIVVGAGDDRVFGDDGDDMLYGE 247
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+L +++ + + G+D + + DS ++ + +
Sbjct: 248 AGNDSLSGGNNYDRIFGGDGNDTLRGDAGRDVLIGEAGTDILWGGADSDRFVFKGAPVLS 307
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 76/282 (26%), Gaps = 11/282 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI----GH 130
D + D + G+G + + + GH
Sbjct: 40 FGGDGNDFIVGGLGDDYAEGGTGNDRFDGGLGHDTLKGGLGNDILDGGDGSDILDGGDGH 99
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L G D + + S ++ ++ + G V+
Sbjct: 100 DQILGGRGHDKIFGGAGEEYIDAGDGDDIIYAGSGDDGFNNRVNPATGQVTQQAVAGGAG 159
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
KIYG +G+ + G++ LD GG N + +
Sbjct: 160 HDKIYG-EEGNDALKGQSGNDWVYGGIGNDIVDGGDGNNYLD----GGDGNDVLDSEGGI 214
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G N I + V G G+D++ G + N+ + D G G DT
Sbjct: 215 DEAHGGTGNDKIVVGAGDDRVFGDDGDDMLYGEAGNDSLSGGNNYDRIFGGDGNDTLR-- 272
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
+ + I++ + + L D +D
Sbjct: 273 GDAGRDVLIGEAGTDILWGGADSDRFVFKGAPVLSGQDTVMD 314
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 68/305 (22%), Gaps = 29/305 (9%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
D D G+G LG G
Sbjct: 23 GYASDDYLDGAEGNDKLFGGDGNDFIVGGLGDDYAEGGTGNDRFDGGLGHDTLKGGLGND 82
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ G D D + G+ + + G G+
Sbjct: 83 ILDGGDGSDILD---------GGDGHDQILGGRGHDKIFGGAGEEYIDAGDGDDIIYAGS 133
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + T G I G E N +
Sbjct: 134 GDDGFNNRVNPATGQVTQQAVAG-------------------GAGHDKIYGEEGNDALKG 174
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + V G GND+V G NN GNDV D G+D + + +
Sbjct: 175 QSGNDWVYGGIGNDIVDGGDGNNYLDGGDGNDVLDSEGGIDEA-HGGTGNDKIVVGAGDD 233
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D + + + L + L A + LI G D+
Sbjct: 234 RVFGDDGDDMLYGEAGNDSLSGGNNYDRIFGGDGNDTLRGDAGRDVLIGEAGTDILWGGA 293
Query: 385 HFYEF 389
F
Sbjct: 294 DSDRF 298
>gi|198430583|ref|XP_002121453.1| PREDICTED: similar to matrix metalloproteinase 14
(membrane-inserted) alpha [Ciona intestinalis]
Length = 685
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 56/199 (28%), Gaps = 49/199 (24%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF--EET 73
++ W I Y + T +L E A W V L F +
Sbjct: 172 YVTVGSPWQKNLITYSINNFTPKLG----QKLT---HEAIDDAFRVWGSFVPLQFKKVDA 224
Query: 74 SIHSDI-------------KFISSNN--GYVCTPRYDSRYFMEINFDKADVWRYGIGKGT 118
S + DI F + P + + G +G
Sbjct: 225 SQNPDIVTFFAEGFHNDNTNFDGVGGYLAHAFYPGSGIGGDTHFDGAEPWTLHQGPNRGN 284
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
L A+HE+GHALGL H + V Y ++ F
Sbjct: 285 DLFLVAVHELGHALGLQHSPDVKA---------------IMAPVYKYHDTEN------FQ 323
Query: 179 YCATPMVSDIVAVQKIYGA 197
DI+ +Q +YGA
Sbjct: 324 LPQ----DDILGIQSLYGA 338
>gi|13937107|gb|AAK50052.1|AF363362_2 RTX toxin IIA [Actinobacillus pleuropneumoniae]
Length = 956
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 67/197 (34%), Gaps = 3/197 (1%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFM--PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G +D +D S Y + Y V D A+ +
Sbjct: 624 GSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHETIATHPT 683
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
++GN KIE +++D F + ++ + N I ++ G
Sbjct: 684 NVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQF-NDIFKGSQFDDVFHGGNGVD 742
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
TI + + + G +G+DV+ G + NN +GND+ G D + + I
Sbjct: 743 TIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGGTGNDIISGGKDNDIYVHKTGDGNDSITD 802
Query: 321 FENAIIVYDANEHKQDF 337
+ ++ + +D
Sbjct: 803 SGGQDKLAFSDVNLKDL 819
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 60/212 (28%), Gaps = 61/212 (28%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT----ESWS------------- 251
I G D + + ID S+S
Sbjct: 617 GNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDATAETEKGSYSVKRYVGDSKALHE 676
Query: 252 SIGGYEKNMT--------------------------------------IAQHTVIESVV- 272
+I + N+ I + + + V
Sbjct: 677 TIATHPTNVGNREEKIEYRREDDRFHTGYTVTDSLKSVEEIIGSQFNDIFKGSQFDDVFH 736
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G D + GN ++ F +G+DV DG +G + F + I ++ I
Sbjct: 737 GGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNN--FLVGGTGNDIISGGKDNDIYVHKTG 794
Query: 333 HKQDFLSDV---ERLRFADQCIDSVNVKQRSI 361
D ++D ++L F+D + + K+
Sbjct: 795 DGNDSITDSGGQDKLAFSDVNLKDLTFKKVDS 826
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 35/219 (15%), Positives = 51/219 (23%), Gaps = 63/219 (28%)
Query: 265 HTVIESVVGSSGNDVVIGN--SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+IE S + +I N + N+ F S V DG G D Y Y +
Sbjct: 600 GNIIE-----SKDTKIIANLGAGNDNVFVGSSTTVIDGGDGHDRVHYSRGEYGALVIDAT 654
Query: 323 -----NAIIVYDANEHK------------------------------------QDFLSDV 341
+ V D L V
Sbjct: 655 AETEKGSYSVKRYVGDSKALHETIATHPTNVGNREEKIEYRREDDRFHTGYTVTDSLKSV 714
Query: 342 ERL---RFAD------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
E + +F D ++ + L G DV +
Sbjct: 715 EEIIGSQFNDIFKGSQFDDVFHGGNGVDTIDGNDGDDHLFGGAGDDVIDGGNGNNFLVGG 774
Query: 393 EGRDIT---FDSYLY---LGSYDDLRNVFGSDRGAAARH 425
G DI D+ +Y G +D G A
Sbjct: 775 TGNDIISGGKDNDIYVHKTGDGNDSITDSGGQDKLAFSD 813
>gi|307944001|ref|ZP_07659343.1| iron-regulated protein FrpC [Roseibium sp. TrichSKD4]
gi|307772842|gb|EFO32061.1| iron-regulated protein FrpC [Roseibium sp. TrichSKD4]
Length = 612
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 64/231 (27%), Gaps = 14/231 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ GDD L G ++ G + + ++ +
Sbjct: 291 NDILYGGTGQDELHGRSGDDTL----YGNNGEDDLHGGSGDDALYGGSASDNLYGNSGND 346
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G GND + GN+ +++ SGND G +G DT + ++
Sbjct: 347 TLFGGQGNDSLNGNNGDDILNGESGNDELIGGTGNDTL--DGGHGNDILDGEYGNDVIKG 404
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
Q LR + A + + G D + + +
Sbjct: 405 GAGDDQ--------LRGGYNNDELFGGHGNDTFYGDAGNDVMHGGRGVDTVDYSAYDVDL 456
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+S + + + N+ D + V G D
Sbjct: 457 TVSLHNKKAHGLEIGSDTLKFIDNITSGDGDDFLKGSSGDNVINGGAGDDT 507
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 85/279 (30%), Gaps = 13/279 (4%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
T ++ D G + ++ + G NG + G
Sbjct: 310 DTLYGNNGEDDLHGGSGDDALYGGSASDNLYGNSGNDTLFGGQGNDSLNGNNGDDILNGE 369
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ E + + ++D +G + ++ Y + G+
Sbjct: 370 SGNDELIGGTGNDTLDGGHGNDILDGEYGNDVIKGGAGDDQLRGGYNNDELFGGH----G 425
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK---NMTIAQHT 266
++ G D +D + N ++ G + I
Sbjct: 426 NDTFYGDAGNDVMHGGRGVDTVDYSAYDVDLTVSLHNKKAHGLEIGSDTLKFIDNITSGD 485
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL------YKIYR 320
+ + GSSG++V+ G + ++ +G DV G +G DTF +
Sbjct: 486 GDDFLKGSSGDNVINGGAGDDTIRGLTGEDVLTGGAGADTFVFRTFDLNPADVITDFDLL 545
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+ + + A + FLS ++ L D + SV++
Sbjct: 546 NDTLDLSHLAGGEGEGFLSSLQALEQGDGTLLSVDLNGD 584
Score = 40.5 bits (93), Expect = 0.83, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + + + G G+D +IG + N+ + +G+D G++G D +
Sbjct: 3 GTNDDDILNGTVHSDVISGRFGDDTLIGANGNDEVWGGTGDDTLYGNNGNDILYGSGGPN 62
Query: 315 LYKIYRFENAI 325
L +I E
Sbjct: 63 LVQITSVEIGD 73
>gi|148692986|gb|EDL24933.1| matrix metallopeptidase 12 [Mus musculus]
Length = 462
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 59/185 (31%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 102 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 161
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 162 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 218
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S + Y P DI +Q
Sbjct: 219 LQHSNNPK---------------SIMYPTYRYLNPST----------FRLSADDIRNIQS 253
Query: 194 IYGAP 198
+YGAP
Sbjct: 254 LYGAP 258
>gi|26991602|ref|NP_747027.1| serine protease [Pseudomonas putida KT2440]
gi|24986692|gb|AAN70491.1|AE016690_7 serine protease, subtilase family [Pseudomonas putida KT2440]
Length = 1805
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/224 (15%), Positives = 61/224 (27%), Gaps = 13/224 (5%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A ++++ GS+G+DV+ + G++ + G +G D F A +
Sbjct: 554 AAALGVQTLYGSAGDDVLTAAPEGSWLVGGGGSNTYHGGAGDDVFVISASDDWANMQGNG 613
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTASYEDLIQVIGQD 378
EH L A I + ++ ++ + LI G D
Sbjct: 614 GRDTALIVGEHGVGLNMAKAGLTIAQGGRGKDIIASGGQRGVFIKGGSGDSLLIGGGGND 673
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
V + G+ + Y G D Y G
Sbjct: 674 VLVGGTGRNDIIGGTGKSVI-----YAGPKGDRIQASAGGSII----YAGGGADRITGGA 724
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
A +E + + D + E G +T
Sbjct: 725 ADDVIEAGRGDATIDGGAGTNLVSLHGAHDEYLITRTESGHLIT 768
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 60/170 (35%), Gaps = 6/170 (3%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
K + GG+D+L + G +N I T S I K I +
Sbjct: 656 FIKGGSGDSLLIGGGGNDVL---VGGTGRNDIIGGTGK-SVIYAGPKGDRIQASAGGSII 711
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA--IIVYD 329
G D + G +A++V G+ DG +G + + Y I R E+ I
Sbjct: 712 YAGGGADRITGGAADDVIEAGRGDATIDGGAGTNLVSLHGAHDEYLITRTESGHLITDTV 771
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
A + LS++++L FAD + + S E L D
Sbjct: 772 AGRDGRLSLSNIQKLSFADIAAIDLLGGGAMPIGDRLSPEQLATFATTDT 821
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 72/198 (36%), Gaps = 16/198 (8%)
Query: 202 LGNNIYKIEV--------QQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSS 252
+++Y + I + GG + L+ + + +DL + S S
Sbjct: 1398 TTDDVYYFTDDYANLVAENPGRAKLDDAISGTAGGRNTLNAAAVSRSIS-VDLASGSASI 1456
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-A 311
G +TIA +V ++++ G+D +I A + G ++ G G D F +
Sbjct: 1457 AGAA---LTIAPGSV-QNLISGDGDDTLIAGPAGALLDGGRGYNLLKGGEGTDRFVIHRR 1512
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ +FE + V D +D++ + + + + Q+ L T E
Sbjct: 1513 AGGNDVLKQFETSREVIDLVGFGGSGFADLQMQQDGNSTVLDLGSGQKLTLADTTIAELR 1572
Query: 372 IQVIGQ-DVFESMKHFYE 388
D F + ++E
Sbjct: 1573 SANFRFLDAFTAAPGYFE 1590
>gi|163793742|ref|ZP_02187716.1| Mpr [alpha proteobacterium BAL199]
gi|159180853|gb|EDP65370.1| Mpr [alpha proteobacterium BAL199]
Length = 442
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 43/159 (27%), Gaps = 11/159 (6%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I T ++V G +G+D + G S N+V + + G D+ G G DT F
Sbjct: 247 DVITGSTGSDTVSGYAGDDTIWGESGNDVIYGNQGADLISGQDGNDTIFGGQNQGPAGSD 306
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D L IL + L G D
Sbjct: 307 GIARNGTDTIQGGDGADVLYG------NMGGDLVDGDSGDDILYGGQDSDTLRGGDGADR 360
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
H G D G +DL + D
Sbjct: 361 VFGNLHNDTLSGGGGNDTLLG-----GDGNDLLSGGSGD 394
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 59/225 (26%), Gaps = 7/225 (3%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ ++ + G + G + +
Sbjct: 191 NGQTTIVGVHTAGGSFYNAGTALTSDFYSLIDGWTGGDINGS-VVVVTSSTSGTASADVI 249
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ +V Y ++ +D+++ Q G G N
Sbjct: 250 TGSTGSDTVSGYAGDDTIWGESGNDVIYGNQGADLISGQD--GNDTIFGGQNQGPAGSDG 307
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
TI G D+L + G + + + G + + T+ + V G
Sbjct: 308 IARNGTDTIQGGDGADVLYGNMGGDLVD----GDSGDDILYGGQDSDTLRGGDGADRVFG 363
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ ND + G N+ GND+ G SG D +
Sbjct: 364 NLHNDTLSGGGGNDTLLGGDGNDLLSGGSGDDLLYGDNLFSGVVT 408
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 55/392 (14%), Positives = 102/392 (26%), Gaps = 35/392 (8%)
Query: 71 EETSIHSDIKFISSNNGYVCTPR-----YDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
D + G + +P + + + K G+ A
Sbjct: 26 VRVDFDGDGSYDGWGTGAMISPNDVLTAGHVLWDSQYGYAKNIQVIPARDGGSTPFGTA- 84
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
G A + GG Y + S +S + + S D T
Sbjct: 85 --EGTAWYVPDAYISTGGTFAYDIGVINLGTSIGSSTGTLALQATSGPDLVGTTVTTAGY 142
Query: 186 -----SDIVAVQKIYGAPKGSLGNNIYKIEVQ------QKDSPFIQTIYDSGGDDLLDLT 234
S+ + G GS+G+N Q SP T+ +
Sbjct: 143 PGDLSSNGSVMITTSGEIDGSIGDNRVYYNGTLDSYGGQSGSPLWVTVNGQTTIVGVHTA 202
Query: 235 LIGGVKNYIDLNTESWSSIGGYEK-NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
L ++ +S I G+ ++ + V S G++ DV+ G++ ++ +
Sbjct: 203 GGSFYNAGTALTSDFYSLIDGWTGGDINGSVVVVTSSTSGTASADVITGSTGSDTVSGYA 262
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G+D G SG D Y I + ++ + R
Sbjct: 263 GDDTIWGESGND--VIYGNQGADLISGQDGNDTIFGGQNQGPAGSDGIAR---------- 310
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
++ + L +G D+ + + D + +L N
Sbjct: 311 ---NGTDTIQGGDGADVLYGNMGGDLVDGDSGDDILYGGQDSDTLRGGDGADRVFGNLHN 367
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
S G G L
Sbjct: 368 DTLSGGGGNDTLLGGDGNDLLSGGSGDDLLYG 399
Score = 41.3 bits (95), Expect = 0.50, Method: Composition-based stats.
Identities = 32/271 (11%), Positives = 75/271 (27%), Gaps = 13/271 (4%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIES---VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + GY +++ +I + + GS G++ V N + + SG+ ++ +G
Sbjct: 134 GTTVTTAGYPGDLSSNGSVMITTSGEIDGSIGDNRVYYNGTLDSYGGQSGSPLWVTVNGQ 193
Query: 305 DTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
T + + F + I + + +
Sbjct: 194 TTIVGVHTAGGSFYNAGTALTSDFYSLIDGWTGGDINGSVVVVTSSTSGTASADVITGST 253
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ A + + G DV + +G D F + D G+
Sbjct: 254 GSDTVSGYAGDDTIWGESGNDVIYGNQGADLISGQDGNDTIFGGQNQGPAGSDGIARNGT 313
Query: 418 DRGAAARH---YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
D + + + D+ + Y D + A + + + G
Sbjct: 314 DTIQGGDGADVLYGNMGGDLVDGDSGDDILYGGQDSDTLRGGDGADRVFGNLHNDTLSGG 373
Query: 475 CEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ D L ++G + +
Sbjct: 374 GGNDTLLGGDGNDLLSGGSGDDLLYGDNLFS 404
>gi|291221485|ref|XP_002730753.1| PREDICTED: matrix metalloproteinase 19 isoform rasi-1
preproprotein-like [Saccoglossus kowalevskii]
Length = 397
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 67/212 (31%), Gaps = 27/212 (12%)
Query: 8 YTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+ ER+ + L W + ++ T+ + ++ + WS V
Sbjct: 18 FMPERLRRYALGGYKWGKTDLTFRFLSYTSDM-------TDSEQRDAIYRSFKHWSDVTP 70
Query: 68 LTFEETSIH-SDIKFISSNNGYVCTPRYDSRY------------FMEINFDKADVWRYGI 114
LTF E S +DI + + P +++FD + +
Sbjct: 71 LTFTEVSNGEADILIEFATGVHSDGPGAAFDGPGGTLAHAYFPEDGDMHFDDDEYFTVNS 130
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN-----DSFLTSVMSYFMPQ 169
G L A HE+GH+LGL H G N + + + D +
Sbjct: 131 DHGINLDFTATHELGHSLGLSHSGDQNAIMYPFYLGYVPDLQLKQDDIIGIQTLYGSNEA 190
Query: 170 DSMMDASFGYCATP--MVSDIVAVQKIYGAPK 199
D + D + P SD AV Y
Sbjct: 191 DVITDGTPVDPGAPDVCTSDFDAVLTDYDKNT 222
>gi|158336332|ref|YP_001517506.1| type I secretion target repeat-containing protein [Acaryochloris
marina MBIC11017]
gi|158306573|gb|ABW28190.1| type I secretion target repeat protein [Acaryochloris marina
MBIC11017]
Length = 760
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 38/261 (14%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL-----NTESWSSIGGYEKNMTIA 263
+ T++ G+D + +L + D +I G N I
Sbjct: 32 GNDKLYGYNGNDTLFGEEGNDEIYGSLGDDSLDGGDGNDTLNGGAGNDTISGQGGNDLIF 91
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G+ G+D++ G + +G D G + DT +
Sbjct: 92 GDVSNDFLYGNDGDDLIFGFDGVDFLDGGAGKDSLYGENDNDTLY------------GRG 139
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ D + +L + L G D +
Sbjct: 140 GADLLDGGA----------------GDDVLYGNGGKDVLYGYTGQDSLEGGNGHDTLDGG 183
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ +G D G+ DD+ + + + + + G DAF
Sbjct: 184 TGNDQLWGGKGNDSLNG-----GAQDDVLDGVRASNNSHSGVNTIDTLLGGEGADAFILG 238
Query: 444 EYIASHEDLINAFADAPDLVQ 464
+ I+++ D NA +
Sbjct: 239 DSISAYYDDGNAATQGDNDYA 259
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 70/202 (34%), Gaps = 17/202 (8%)
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
++ D G T+ EI + + S +GG ++ ND+
Sbjct: 25 YIVYGRKGNDKLYGYNGNDTLFGEEGNDEIYGS---LGDDSLDGGDGNDTLNGGAGNDTI 81
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
+ + D D +G ++ V + G +++Y
Sbjct: 82 SGQGGNDLIFGDVSNDFLYGNDGDDLIFGFDGVDFLDGGAGK---DSLYGENDN------ 132
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
T+Y GG DLLD GG + + + GY ++ +++ G +GND
Sbjct: 133 -DTLYGRGGADLLD----GGAGDDVLYGNGGKDVLYGYTGQDSLEGGNGHDTLDGGTGND 187
Query: 279 VVIGNSANNVFFESSGNDVFDG 300
+ G N+ + +DV DG
Sbjct: 188 QLWGGKGNDSLNGGAQDDVLDG 209
Score = 42.5 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 10/132 (7%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+D + + I + + ++ A +++ G +G++ + G + +++ +
Sbjct: 600 IDYVRVYQDASGILHGGLADDVLSKDLGDL--AGEAGNDTLTGGTGDNHLDGGAGDDMLW 657
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
S G D G GLD F S L+ D N +++ +D
Sbjct: 658 GSEGLDTMMGGLGLDQFILGDASGLFYDDG--------DVNTSGATDYANILDFALSDDV 709
Query: 351 IDSVNVKQRSIL 362
I +L
Sbjct: 710 IQLQGSAADYVL 721
>gi|71051388|gb|AAH99337.1| Mmp18 protein [Xenopus laevis]
Length = 477
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 54/201 (26%), Gaps = 49/201 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPN-----AQEVARWALGEWSKVVDLTFE---- 71
Y K L++ I P+ + + A WS V LTF
Sbjct: 105 YDVGQYSTVAKSSAWQKKDLTYRILNFTPDLPQADVETAIQRAFKVWSDVTPLTFTRIYN 164
Query: 72 -----ETSIHSDIK-----FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
E S + F S + + + +FD+ + W L
Sbjct: 165 EVSDIEISFTAGDHKDNSPFDGSGGILAHAFQPGNGIGGDAHFDEDETWTKTSEIYN-LF 223
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH+LGL H + D
Sbjct: 224 LVAAHEFGHSLGLSHSTDQGALMYPTYSNTD---------------------------PK 256
Query: 182 TPMV--SDIVAVQKIYGAPKG 200
T + DI A+Q +YG
Sbjct: 257 TFQLPQDDINAIQYLYGKSSN 277
>gi|332704788|ref|ZP_08424876.1| glycosyl transferase family 2 [Desulfovibrio africanus str. Walvis
Bay]
gi|332554937|gb|EGJ51981.1| glycosyl transferase family 2 [Desulfovibrio africanus str. Walvis
Bay]
Length = 1237
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 13/86 (15%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYD 577
F A Y+ S++D+ + P +HF G EGR+ + F+ Y+
Sbjct: 17 ETGLFDARYYLLSNQDVAAS-GMNPL------EHFLTRGGFEGRNPSRHFDVFWYVEQNP 69
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGR 603
+L + HY+ G +EGR
Sbjct: 70 ELLQ----QKINPLIHYLVQGRQEGR 91
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
FD+ YL S D+ + H++T G EGRNP F Y+ + +L+
Sbjct: 21 FDARYYLLSNQDVAASGMN----PLEHFLTRGGFEGRNPSRHFDVFWYVEQNPELLQQ-K 75
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSI 565
P + H+ G +EGR
Sbjct: 76 INPLI------HYLVQGRQEGRLP 93
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 13/92 (14%)
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYL 489
+ F A Y+ S++D+ + + +HF G EGR + FD + Y+
Sbjct: 13 RLLVETGLFDARYYLLSNQDVAASGMNP-------LEHFLTRGGFEGRNPSRHFDVFWYV 65
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
+L + HY+ G +EGR P
Sbjct: 66 EQNPELLQQKIN----PLIHYLVQGRQEGRLP 93
Score = 45.2 bits (105), Expect = 0.033, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 61/220 (27%), Gaps = 36/220 (16%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRN 413
Y S +D + G + +HF G EGR+ + FD + Y+ +L
Sbjct: 18 TGLFDARYYLLSNQD-VAASGMNPL---EHFLTRGGFEGRNPSRHFDVFWYVEQNPELLQ 73
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ HY+ G +EGR P + D +
Sbjct: 74 ----QKINPLIHYLVQGRQEGRLP--------------MPPTTRDTETGPCHEFERVPAG 115
Query: 474 GCEEGRFVTF--DSYLYLGSYDDLRNVFGS---DRGAAARHYITHGVKEGRNPDAFKAL- 527
R + F + + D + + A + H F L
Sbjct: 116 MDRRVRLIAFYLPQFHPIPENDKHWGKGFTEWNNVVKARPVFTGHYQPRLPGELGFYDLR 175
Query: 528 --EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
+ + +L + H+ FG + R+
Sbjct: 176 VKDVLRRQMELARQYGIHGF----CLHHYWFFGRKLLRTP 211
Score = 40.5 bits (93), Expect = 0.88, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFK 613
F+ YL S D+ + +H++T G EGR F
Sbjct: 21 FDARYYLLSNQDV----AASGMNPLEHFLTRGGFEGRNPSRHFDVFW 63
>gi|301752966|ref|XP_002912340.1| PREDICTED: matrix metalloproteinase-15-like [Ailuropoda
melanoleuca]
Length = 648
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 51/182 (28%), Gaps = 36/182 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + W+N+ + + T + E R A W + L F+E
Sbjct: 122 LTGRKWTNHHLTFSIQNYTEKLGWYHSLE-------AVRRAFRVWEQATPLVFQEVPYED 174
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+ +
Sbjct: 175 IRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSST 234
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE-----NDSFLTSVMSYFMP 168
G L A+HE+GHALGL H + + + D + D Y P
Sbjct: 235 DLHGNSLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTDTFQLPEDDLRGIQQLYGEP 294
Query: 169 QD 170
D
Sbjct: 295 AD 296
>gi|260751837|ref|YP_003237751.1| hemolysin A [Escherichia coli O111:H- str. 11128]
gi|257767829|dbj|BAI39321.1| hemolysin A [Escherichia coli O111:H- str. 11128]
gi|323181118|gb|EFZ66652.1| hemolysin, chromosomal [Escherichia coli 1180]
Length = 998
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 34/216 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYR 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKAINGVLSFNESND 889
Query: 370 D----LIQVIGQDVFESMKHFYE-FGLSEGRDITFD 400
+D + H E +GR+I D
Sbjct: 890 VNGITFKNWFAKDASGADNHLVEVITDKDGREIKVD 925
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 46/164 (28%), Gaps = 19/164 (11%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G I +E ++G +D G N++F + GND +G+ G D +
Sbjct: 685 FEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLY- 743
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + ++ + D LS D L+ +Y
Sbjct: 744 -GDDGDDYISGGQGDDQLFGGS--GNDKLSG------GDGNNYLTGGSGNDELQAHGAYN 794
Query: 370 DLIQVIGQDVFE---------SMKHFYEFGLSEGRDITFDSYLY 404
L G D + G DI Y
Sbjct: 795 ILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNY 838
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 56/197 (28%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKRVGNDLI 873
>gi|1514963|dbj|BAA11524.1| stromelysin-1/2-a [Cynops pyrrhogaster]
Length = 483
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 57/195 (29%), Gaps = 51/195 (26%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIK 80
W + Y+ T D+ R A WS V LTF +DI+
Sbjct: 106 TWRTTSLTYRILGYTPDMAEADVD-------TAIRRAFKVWSDVTPLTFSRIYEGTADIQ 158
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ P + +FD+ + W G G L A
Sbjct: 159 ISFGAGVHGDFYPFDGPHGTLAHAFAPGNS--IGGDAHFDEDETWTAGSA-GYNLFLVAA 215
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GH+LGL H G + + SY P A F
Sbjct: 216 HEFGHSLGLSHSGD---------------RSALMYPTYSYIDP------ARFRLPQ---- 250
Query: 186 SDIVAVQKIYGAPKG 200
D+ +Q +YGA
Sbjct: 251 DDVDGIQALYGASPN 265
>gi|253995849|ref|YP_003047913.1| Hemolysin-type calcium-binding domain-containing protein
[Methylotenera mobilis JLW8]
gi|253982528|gb|ACT47386.1| Hemolysin-type calcium binding domain protein [Methylotenera mobilis
JLW8]
Length = 2787
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/321 (14%), Positives = 97/321 (30%), Gaps = 21/321 (6%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK----GTILSHNALHEI 128
+ S ++ + Y T AD+ G G G + +
Sbjct: 2335 VTGTSGNDTLNGLSSYNNTLLGMEGSDTLYGGTLADILVGGAGDDVLNGIYNGGTSYWDT 2394
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
+ G+ Y + ++ A VSD+
Sbjct: 2395 TGNIYEGGIGNDTLNGTAGSDTYRYNKGDGADIINEGSQNGNTTSVDKIVLGADIAVSDV 2454
Query: 189 VAVQKIYGAP----KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD------LLD--LTLI 236
++ + G++I + I+ + + G D +
Sbjct: 2455 TLMRANNSNNLILKFANTGDSITINNWYSDATGRIEQVVFADGTVWDKAKLTTDGLVVTG 2514
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ ++ + +++ G + N T+ + + ++++G +G+D + + NN+F GND
Sbjct: 2515 TSGNDTLNGLSSYNNTLVGGDGNDTLYGNNLADTLIGGAGSDSLNDTAGNNLFDGGLGND 2574
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ SG D I ++ QD + AD I
Sbjct: 2575 IITAGSGNDLLI--GGFGNDTITTGTGYDVIVFNKGDGQDI---INASTGADNTISLGGN 2629
Query: 357 KQRSILEYTASYEDLIQVIGQ 377
S L +T S DLI +G
Sbjct: 2630 FAYSDLSFTKSTNDLILKVGT 2650
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 70/625 (11%), Positives = 148/625 (23%), Gaps = 131/625 (20%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG-------TILSHNAL 125
+ + ++ +GY T + + AD G G ++
Sbjct: 1257 VTGTTGNDTLNGLSGYNNTLIGGAGNDTLVGVYLADTLIGGAGDDILNGSIAGYSYYDTA 1316
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
I + G Y + D + + + +
Sbjct: 1317 GNIYEGGTGNDTLNGTAGSDTYRYNKGDGADIINEGYQNGNTTSVDKIVLGADIAVSDVT 1376
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD------LLD--LTLIG 237
+ G++I + I+ + + G D +
Sbjct: 1377 LMRANNSNNLILKFANTGDSITINNWYSDATGRIEQVVFADGTVWDKAKLTTDGLVVTGT 1436
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN---------NV 288
+ ++ + +++ G + N T+ T+ ++++G +G+DV+ GNS+ N+
Sbjct: 1437 SGNDTLNGLSSYNNTLLGMDGNDTLQGSTLADTLIGGAGDDVLNGNSSASYSYYDTTGNL 1496
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--ENAIIVYDANEHKQDFLSD------ 340
+ GND +G++G DT+ Y I D D
Sbjct: 1497 YEGGIGNDTLNGTAGSDTYRYNKGDGADIINEGYQNGNTTSVDKIVLGADIAVSDVTLMR 1556
Query: 341 ------------------------------VERLRFADQCI-----------DSVNVKQR 359
+E++ FAD +
Sbjct: 1557 ANNSNNLILKFANTGDSITINNWYSDATGRIEQVVFADGTVWDKAKLTTDGLVVTGTSGN 1616
Query: 360 SILEYTAS-YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN----- 413
L +S L+ + G D + G D+ + SY D
Sbjct: 1617 DTLNGLSSYNNTLLGMDGNDTLQGSTLADTLIGGAGDDVLNGNSSASYSYYDTTGNLYEG 1676
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL------INAFADAPDLVQVGK 467
G+D T+ +G D + + + +V+
Sbjct: 1677 GIGNDTLNGTAGSDTYRYNKGDGADIINEGYQNGNTTSVDKIVLGADIAVSDVAVVRPTD 1736
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
S Y + + V +D + +T L
Sbjct: 1737 SSNLILKFANSGDSITISNWYSDATGRIEQVVFADGTVWDKAKLTTDGLVVTGTSGNDTL 1796
Query: 528 EYIASHEDLI----------------------------------------------NAFA 541
++S+ + +
Sbjct: 1797 NGLSSYNNTLLGMDGNDTLQGSTLADTLIGGAGDDVLNGNSSASYSYYDTTGNLYEGGIG 1856
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT 566
+ AG D + + I
Sbjct: 1857 NDTLNGTAGSDTYRYNKGDGADIIN 1881
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 79/604 (13%), Positives = 148/604 (24%), Gaps = 95/604 (15%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D + G S + D D T++ + L
Sbjct: 899 TADGLVVIGTTGNDTLNGLSSYNNTLLGMDGNDTLNGSGLTDTLIGGAGDDILNGNLAGY 958
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD------IV 189
G G ND N + + Y + D +
Sbjct: 959 SYYDTAGNIYEGGTGNDTLNGTAGSDTYRYNKGDGADTINEGYQNNNTTSVDKIVLGADI 1018
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
AV + + N + K D+ + G + + L T+
Sbjct: 1019 AVSDVTLSRPNGTTNLVLKFANAGDSITINNWYGDATYRVEQLVFADGTIWDKDKLTTDG 1078
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD---------- 299
IG + + +++G GND + G+ + +G+D+ +
Sbjct: 1079 SVVIGTTGNDTLNGLSSYNNTLLGMDGNDTLNGSGLTDTLIGGAGDDILNGHIAGYSYYD 1138
Query: 300 -------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD------------ 340
G +G DT A S Y+ + + A I+ + ++ D
Sbjct: 1139 TAGNIYEGGTGNDTLNGTAGSDTYRYNKGDGADIINEGYQNGNTTSVDKIILGAGIAPED 1198
Query: 341 -----------------------------------VERLRFADQCI-----------DSV 354
VE+L FAD I
Sbjct: 1199 VVLSRLQGTNDLVISFATAGDQIKIPSWYAGNDYRVEQLVFADGTIWDKTKLTADGLVVT 1258
Query: 355 NVKQRSILEYTAS-YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
L + LI G D + G DI S YD N
Sbjct: 1259 GTTGNDTLNGLSGYNNTLIGGAGNDTLVGVYLADTLIGGAGDDILNGSIAGYSYYDTAGN 1318
Query: 414 VF----GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL------INAFADAPDLV 463
++ G+D T+ +G D + + + L+
Sbjct: 1319 IYEGGTGNDTLNGTAGSDTYRYNKGDGADIINEGYQNGNTTSVDKIVLGADIAVSDVTLM 1378
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
+ + + Y + + V +D + +T
Sbjct: 1379 RANNSNNLILKFANTGDSITINNWYSDATGRIEQVVFADGTVWDKAKLTTDGLVVTGTSG 1438
Query: 524 FKALEYIASHED-LINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNV 582
L ++S+ + L+ + D + G + N + YD N+
Sbjct: 1439 NDTLNGLSSYNNTLLGMDGNDTLQGSTLAD--TLIGGAGDDVLNGNSSASYSYYDTTGNL 1496
Query: 583 FGSD 586
+
Sbjct: 1497 YEGG 1500
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 36/271 (13%), Positives = 81/271 (29%), Gaps = 14/271 (5%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + N YD+ + D G T + G
Sbjct: 1826 GGAGDDVLNGNSSASYSYYDTTGNLYEGGIGNDTLNGTAGSDTYRYNKGDGADIINEG-- 1883
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
Y G D ++ V S + F + +
Sbjct: 1884 ----YQNGNTTSVDKIVLGADIAVSDVAVVRPTGSSNLILKFANSGDSITINNWYSDATG 1939
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV------KNYIDLNTES 249
+ + + + + T + G+D L+ N +
Sbjct: 1940 RIEQVVFADGTVWDKAKLTTDGLVVT--GTSGNDTLNGLSSYNNTLLGMEGNDVLSGGGG 1997
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G N + + ++++G +G+DV+ GNS+ + + + ++++G +G DT
Sbjct: 1998 NDILDGGAGNDVLNGGALADTLIGGAGDDVLNGNSSASYSYYDTTGNLYEGGTGNDTLNG 2057
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
A S Y+ + + A + + ++ D
Sbjct: 2058 TAGSDTYRYNKGDGADTINEGYQNSNTTSVD 2088
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 68/584 (11%), Positives = 137/584 (23%), Gaps = 105/584 (17%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ I + I DV
Sbjct: 1989 NDVLSGGGGNDILDGGAGNDVLNGGALADTLIGGAGDDVLNGNSSASYSYYDT-----TG 2043
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L G+ Y ++ + ++ A VSD+
Sbjct: 2044 NLYEGGTGNDTLNGTAGSDTYRYNKGDGADTINEGYQNSNTTSVDKIVLGADIAVSDVTV 2103
Query: 191 VQKIYGAPKG----SLGNNIYKIEVQQKDSPFIQTIYDSGGDD------LLD--LTLIGG 238
+ + + G++I + I+ + + G D + +
Sbjct: 2104 GRPNGTSNLTLKFANAGDSITISNWYSDATGRIEQVVFADGTIWDKTKLTTDGLVVVGSA 2163
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG--------NSANNVFF 290
+ +D +++ G + + + + ++G +GND + G +A N++
Sbjct: 2164 SNDTLDGLNNYNNTLKGMDGDDVLIGREREDILIGGAGNDTLHGYVAGYSSSETAGNIYE 2223
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--ENAIIVYDANEHKQDFLSD-------- 340
+GND +G++G DT+ Y I D D
Sbjct: 2224 GGTGNDTLNGTAGSDTYRYNKGDGADIINEGSQNGNTTSVDKIVLGADIAVSDVTLMRAN 2283
Query: 341 ----------------------------VERLRFADQCI-----------DSVNVKQRSI 361
+E++ FAD +
Sbjct: 2284 NSNNLILKFANTGDSITINNWYSDATGRIEQVVFADGTVWDKAKLTTDGLVVTGTSGNDT 2343
Query: 362 LEYTAS-YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN-----VF 415
L +S L+ + G D G D+ Y SY D
Sbjct: 2344 LNGLSSYNNTLLGMEGSDTLYGGTLADILVGGAGDDVLNGIYNGGTSYWDTTGNIYEGGI 2403
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL------INAFADAPDLVQVGKDH 469
G+D T+ +G D + + + L++ +
Sbjct: 2404 GNDTLNGTAGSDTYRYNKGDGADIINEGSQNGNTTSVDKIVLGADIAVSDVTLMRANNSN 2463
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
+ Y + + V +D + +T L
Sbjct: 2464 NLILKFANTGDSITINNWYSDATGRIEQVVFADGTVWDKAKLTTDGLVVTGTSGNDTLNG 2523
Query: 530 IASHED-------------------LINAFADAPDLVQAGKDHF 554
++S+ + LI AG + F
Sbjct: 2524 LSSYNNTLVGGDGNDTLYGNNLADTLIGGAGSDSLNDTAGNNLF 2567
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 48/385 (12%), Positives = 98/385 (25%), Gaps = 34/385 (8%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
S + G+ L L +I L+ + +Y
Sbjct: 2336 TGTSGNDTLNGLSSYNNTLLGMEGSDTLYGGTLADI-----LVGGAGDDVLNGIYNGGTS 2390
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
Y + + + S Y + + S+ + ++
Sbjct: 2391 YWDTTGNIYEGGIGNDTLNGTAGSDTYRYNKGDGADIINEGSQNGNTTSVDKIVLGADIA 2450
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
D ++ + ++L+ G I+ +S G + + A TV +
Sbjct: 2451 VSDVTLMRA---NNSNNLILKFANTGDSITIN---NWYSDATGRIEQVVFADGTVWDKAK 2504
Query: 273 GSSGNDVVIGNSANNVFFE-SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
++ VV G S N+ SS N+ G G DT + N +
Sbjct: 2505 LTTDGLVVTGTSGNDTLNGLSSYNNTLVGGDGNDTLY-------------GNNLADTLIG 2551
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L+D I+ + + LI G D + +
Sbjct: 2552 GAGSDSLND------TAGNNLFDGGLGNDIITAGSGNDLLIGGFGNDTITTGTGYDVIVF 2605
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
++G + + D G + + + + +
Sbjct: 2606 NKG---DGQDIINASTGADNTISLGGNFAYSDLSFTKSTNDLILKVGTADQITLKDWYVG 2662
Query: 452 LINAFADAPDLVQVGKDHFSNFGCE 476
N ++ FS G +
Sbjct: 2663 TTNKSVVNLQVIAEAMTGFSLGGSD 2687
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 64/483 (13%), Positives = 118/483 (24%), Gaps = 87/483 (18%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK----GTILSHNALHEI 128
+ S ++ + Y T AD G G G + + ++
Sbjct: 1610 VTGTSGNDTLNGLSSYNNTLLGMDGNDTLQGSTLADTLIGGAGDDVLNGNSSASYSYYDT 1669
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
L G+ Y + + ++ A VSD+
Sbjct: 1670 TGNLYEGGIGNDTLNGTAGSDTYRYNKGDGADIINEGYQNGNTTSVDKIVLGADIAVSDV 1729
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
V+ N I K D+ G + G V + L T+
Sbjct: 1730 AVVR------PTDSSNLILKFANSGDSITISNWYSDATGRIEQVVFADGTVWDKAKLTTD 1783
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD--------- 299
G + + +++G GND + G++ + +G+DV +
Sbjct: 1784 GLVVTGTSGNDTLNGLSSYNNTLLGMDGNDTLQGSTLADTLIGGAGDDVLNGNSSASYSY 1843
Query: 300 ---------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD---------- 340
G G DT A S Y+ + + A I+ + ++ D
Sbjct: 1844 YDTTGNLYEGGIGNDTLNGTAGSDTYRYNKGDGADIINEGYQNGNTTSVDKIVLGADIAV 1903
Query: 341 -------------------------------------VERLRFADQCI-----------D 352
+E++ FAD +
Sbjct: 1904 SDVAVVRPTGSSNLILKFANSGDSITINNWYSDATGRIEQVVFADGTVWDKAKLTTDGLV 1963
Query: 353 SVNVKQRSILEYTAS-YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
L +S L+ + G DV G D+ L
Sbjct: 1964 VTGTSGNDTLNGLSSYNNTLLGMEGNDVLSGGGGNDILDGGAGNDVLNGGALADTLIGGA 2023
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ + +A+ Y L A + D D + G + +
Sbjct: 2024 GDDVLNGNSSASYSYYDTTGNLYEGGTGNDTLNGTAGSDTYRYNKGDGADTINEGYQNSN 2083
Query: 472 NFG 474
Sbjct: 2084 TTS 2086
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 61/417 (14%), Positives = 112/417 (26%), Gaps = 98/417 (23%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV---------VGSSGNDVVIGN 283
T G + + L S ++I G N TI +++ G GND + G+
Sbjct: 701 FTGSGTSDDDVILGNTSANTISGGLGNDTIFGSGGDDTLSGGGGNDLLDGGDGNDTLSGS 760
Query: 284 SANNVFFESSGNDVFD-----------------GSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + +GND+ + G +G D A S Y+ + + A I
Sbjct: 761 NLADTLIGGAGNDILNGNIAGYSYSDTVGNIYEGGAGNDILNGTAGSDTYRYNKGDGADI 820
Query: 327 VYDANEHKQDFLSD---------------------------------------------- 340
+ + ++ D
Sbjct: 821 INEGYQNGNTTSVDKILLGANIAVSDVTLSRPNGTTNLVLKFANAGDSITINNWYGDATG 880
Query: 341 -VERLRFADQCI-----------DSVNVKQRSILEYTAS-YEDLIQVIGQDVFESMKHFY 387
+E++ FAD I + L +S L+ + G D
Sbjct: 881 RIEQVVFADGTIWDKTKLTADGLVVIGTTGNDTLNGLSSYNNTLLGMDGNDTLNGSGLTD 940
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVF----GSDRGAAARHYITHGVKEGRNPDAFKAL 443
G DI + YD N++ G+D T+ +G D
Sbjct: 941 TLIGGAGDDILNGNLAGYSYYDTAGNIYEGGTGNDTLNGTAGSDTYRYNKGDGADTINEG 1000
Query: 444 EYIASHEDLIN-------AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ + A +D G + G +T +++ +Y +
Sbjct: 1001 YQNNNTTSVDKIVLGADIAVSDVTLSRPNGTTNLVLKFANAGDSITINNWYGDATYRVEQ 1060
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED-LINAFADAPDLVQAGKD 552
VF T G L ++S+ + L+ + D
Sbjct: 1061 LVFADGTIWDKDKLTTDGSVVI-GTTGNDTLNGLSSYNNTLLGMDGNDTLNGSGLTD 1116
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 69/630 (10%), Positives = 150/630 (23%), Gaps = 139/630 (22%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D + G S + D D T++ + +
Sbjct: 1075 TTDGSVVIGTTGNDTLNGLSSYNNTLLGMDGNDTLNGSGLTDTLIGGAGDDILNGHIAGY 1134
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-------- 187
G G ND N + + Y + + D
Sbjct: 1135 SYYDTAGNIYEGGTGNDTLNGTAGSDTYRYNKGDGADIINEGYQNGNTTSVDKIILGAGI 1194
Query: 188 ---IVAVQKIYGAPK-----GSLGNNIYKIEVQQKDSPFIQTIYDSGGDD------LLD- 232
V + ++ G + G+ I + ++ + + G D
Sbjct: 1195 APEDVVLSRLQGTNDLVISFATAGDQIKIPSWYAGNDYRVEQLVFADGTIWDKTKLTADG 1254
Query: 233 -LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG--------N 283
+ + ++ + +++ G N T+ + ++++G +G+D++ G +
Sbjct: 1255 LVVTGTTGNDTLNGLSGYNNTLIGGAGNDTLVGVYLADTLIGGAGDDILNGSIAGYSYYD 1314
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--ENAIIVYDANEHKQDFLSD- 340
+A N++ +GND +G++G DT+ Y I D D
Sbjct: 1315 TAGNIYEGGTGNDTLNGTAGSDTYRYNKGDGADIINEGYQNGNTTSVDKIVLGADIAVSD 1374
Query: 341 -----------------------------------VERLRFADQCI-----------DSV 354
+E++ FAD +
Sbjct: 1375 VTLMRANNSNNLILKFANTGDSITINNWYSDATGRIEQVVFADGTVWDKAKLTTDGLVVT 1434
Query: 355 NVKQRSILEYTAS-YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
L +S L+ + G D + G D+ + SY D
Sbjct: 1435 GTSGNDTLNGLSSYNNTLLGMDGNDTLQGSTLADTLIGGAGDDVLNGNSSASYSYYDTTG 1494
Query: 414 -----VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL------INAFADAPDL 462
G+D T+ +G D + + + L
Sbjct: 1495 NLYEGGIGNDTLNGTAGSDTYRYNKGDGADIINEGYQNGNTTSVDKIVLGADIAVSDVTL 1554
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
++ + + Y + + V +D + +T
Sbjct: 1555 MRANNSNNLILKFANTGDSITINNWYSDATGRIEQVVFADGTVWDKAKLTTDGLVVTGTS 1614
Query: 523 AFKALEYIASHEDLI--------------------------------------------- 537
L ++S+ + +
Sbjct: 1615 GNDTLNGLSSYNNTLLGMDGNDTLQGSTLADTLIGGAGDDVLNGNSSASYSYYDTTGNLY 1674
Query: 538 -NAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+ AG D + + I
Sbjct: 1675 EGGIGNDTLNGTAGSDTYRYNKGDGADIIN 1704
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 31/289 (10%), Positives = 71/289 (24%), Gaps = 22/289 (7%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH-EIGHA 131
+ S ++ + Y T + D+ G G + IG A
Sbjct: 1964 VTGTSGNDTLNGLSSYNNTLLGMEGNDVLSGGGGNDILDGGAGNDVLNGGALADTLIGGA 2023
Query: 132 ----LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
L SY+ + + L + + D + S+
Sbjct: 2024 GDDVLNGNSSASYSYYDTTGNLYEGGTGNDTLNGTAGSDTYRYNKGDGADTINEGYQNSN 2083
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+V KI ++ + + + G +
Sbjct: 2084 TTSVDKIVLGADIAVSDVTVGRPNGTSNLTLKFANAGDSITISNWYSDATGRIEQVVFAD 2143
Query: 248 ES-WSSIGGYEKNMTIAQHTVIESVVG-SSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ W + + +++ G ++ N+ + G ++V D+ G +G D
Sbjct: 2144 GTIWDKTKLTTDGLVVVGSASNDTLDGLNNYNNTLKGMDGDDVLIGREREDILIGGAGND 2203
Query: 306 TF---------------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
T Y + + + D ++
Sbjct: 2204 TLHGYVAGYSSSETAGNIYEGGTGNDTLNGTAGSDTYRYNKGDGADIIN 2252
Score = 40.2 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 62/504 (12%), Positives = 134/504 (26%), Gaps = 85/504 (16%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT---ILSHNALHEIG 129
+ + N Y T + + I ++ D+ G G T ++ + E
Sbjct: 2159 VVGSASNDTLDGLNNYNNTLKGMDGDDVLIGREREDILIGGAGNDTLHGYVAGYSSSETA 2218
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
+ G+ Y + ++ A VSD+
Sbjct: 2219 GNIYEGGTGNDTLNGTAGSDTYRYNKGDGADIINEGSQNGNTTSVDKIVLGADIAVSDVT 2278
Query: 190 AVQKIYGAP----KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD------LLD--LTLIG 237
++ + G++I + I+ + + G D +
Sbjct: 2279 LMRANNSNNLILKFANTGDSITINNWYSDATGRIEQVVFADGTVWDKAKLTTDGLVVTGT 2338
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG---------NSANNV 288
+ ++ + +++ G E + T+ T+ + +VG +G+DV+ G ++ N+
Sbjct: 2339 SGNDTLNGLSSYNNTLLGMEGSDTLYGGTLADILVGGAGDDVLNGIYNGGTSYWDTTGNI 2398
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ GND +G++G DT+ Y I N D + + +D
Sbjct: 2399 YEGGIGNDTLNGTAGSDTYRYNKGDGADIINEGSQN-----GNTTSVDKIVLGADIAVSD 2453
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ N IL++ + G IT +++ +
Sbjct: 2454 VTLMRANNSNNLILKF--------------------------ANTGDSITINNWYSDATG 2487
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
+ VF T G+ + + L+ + D
Sbjct: 2488 RIEQVVFADGTVWDKAKLTTDGLVVTGTSGNDTLNGLSSYNNTLVGGDGNDTLYGNNLAD 2547
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
+ T G +
Sbjct: 2548 TLIGGAGSDSLN------------------------------DTAGNNLFDGGLGNDIIT 2577
Query: 529 YIASHEDLINAFADAPDLVQAGKD 552
+ ++ LI F + G D
Sbjct: 2578 AGSGNDLLIGGFGNDTITTGTGYD 2601
>gi|149020726|gb|EDL78531.1| rCG31835 [Rattus norvegicus]
Length = 476
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 59/195 (30%), Gaps = 49/195 (25%)
Query: 25 NYFIRY-KPDVLTTHRLSFDITELN-----PNAQEVARWALGEWSKVVDLTFEETSIH-S 77
F + + +S+ I + AL W +V LTF S +
Sbjct: 98 GGFSTFPGSPKWRKNHISYRIVNYTLDLPRESVDSAIERALKVWEEVTPLTFSRISEGEA 157
Query: 78 DIKFISS---------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + + + P ++ + +FD + W G GT L
Sbjct: 158 DIMISFAVGEHGDFYPFDGVGQSLAHAYPP--GPGFYGDAHFDDDEKWSLGP-SGTNLFL 214
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE+GH+LGL H + + + +
Sbjct: 215 VAAHELGHSLGLFHSNNKESLMYPVYRFSTSQANIR------------------------ 250
Query: 183 PMVSDIVAVQKIYGA 197
DI +Q +YGA
Sbjct: 251 LSQDDIEGIQSLYGA 265
>gi|88813484|ref|ZP_01128719.1| bacteriocin [Nitrococcus mobilis Nb-231]
gi|88789274|gb|EAR20406.1| bacteriocin [Nitrococcus mobilis Nb-231]
Length = 1535
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/361 (15%), Positives = 96/361 (26%), Gaps = 23/361 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ T+Y G D L GG + ++ G + N T+
Sbjct: 1034 GDDVLDGHGGNDTLYGDAGADTL----YGGWGHDALHGGTGADALHGGDHNDTLYGDAEA 1089
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G GND + G + ++V S ++ DG +G D Y Y R+ +
Sbjct: 1090 DTLFGDRGNDTLYGGAGDDVLDGGSDSNTLDGGAGDDLLRNYEWGASYVSGRWVGSTY-- 1147
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV---IGQDVFESMKH 385
A D L + + + + + L+ D+ +
Sbjct: 1148 -AGGRGNDRLQGTRYGDTYRFGLGDGADTIKELDNRSGGSDVLVFGEEIAASDIERVREG 1206
Query: 386 FYEF--GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
++ + + G + R F G++ P+A
Sbjct: 1207 TDLVLRHVNGTDSVRVHRWFDAGGHRLERVEFADGTVWNRSQVEAPGLQLTGTPEADTIH 1266
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
S E L D G D D+ +D L G+D
Sbjct: 1267 GGNISGEVLHGLAGDDVLDGHGGNDTLYG-------DAGADTLYGGWGHDALHGGTGADA 1319
Query: 504 GAAARH----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
H Y L A + L AG D N+ +
Sbjct: 1320 LHGGDHNDTLYGDAEADTLFGDRGNDTLYGGAGDDVLDGGSDSNTLDGGAGDDLLRNYEW 1379
Query: 560 E 560
Sbjct: 1380 G 1380
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 65/438 (14%), Positives = 111/438 (25%), Gaps = 27/438 (6%)
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
L G VY D M + + G +
Sbjct: 715 LNADVAGLLAERRIVYAADGTVTVAGTADPEMLIGNEMSNQITGGDGGDVIAGARGADVL 774
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ GA G + + T+Y G D L GG N
Sbjct: 775 RGANGADTLRGG----EGADELHGGNDHDTLYGDAGADTL----YGGWGNDALHGGTGAD 826
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + N T+ +++ G G+D + G + ++V S ++ DG +G D Y
Sbjct: 827 ALHGGDHNDTLYGDAEADTLFGDRGSDTLYGGAGDDVLDGGSDSNTLDGGAGDDLLRNYE 886
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y R+ + A D L + + + + + L
Sbjct: 887 WGASYVSGRWVGSTY---AGGRGNDRLQGTRYGDTYRFGLGDGADTIKELDNRSGGSDVL 943
Query: 372 IQV---IGQDVFESMKHFYEF--GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ D+ + ++ + + G + R F
Sbjct: 944 VFGEEIAASDIERVREGTDLVLRHVNGTDSVRVHRWFDAGGHRLERVEFADGTVWNRSQV 1003
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
G++ P+A S E L D G D D+
Sbjct: 1004 EAPGLQLTGTPEADAIHGGNISGEVLHGLAGDDVLDGHGGNDTLYG-------DAGADTL 1056
Query: 487 LYLGSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
+D L G+D H Y L A + L
Sbjct: 1057 YGGWGHDALHGGTGADALHGGDHNDTLYGDAEADTLFGDRGNDTLYGGAGDDVLDGGSDS 1116
Query: 543 APDLVQAGKDHFSNFGYE 560
AG D N+ +
Sbjct: 1117 NTLDGGAGDDLLRNYEWG 1134
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 55/181 (30%), Gaps = 21/181 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ T+Y G D L GG + ++ G + N T+
Sbjct: 1280 GDDVLDGHGGNDTLYGDAGADTL----YGGWGHDALHGGTGADALHGGDHNDTLYGDAEA 1335
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-----------------YYA 311
+++ G GND + G + ++V S ++ DG +G D Y
Sbjct: 1336 DTLFGDRGNDTLYGGAGDDVLDGGSDSNTLDGGAGDDLLRNYEWGASYVSGRWVGSTYAG 1395
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
++ D + +++ + + L + + +DL
Sbjct: 1396 GRGNDRLQGTRYGDTYRFGLGDGADTIKELDNRSGGSDVLVFGAGIVKEDLWLSRNGDDL 1455
Query: 372 I 372
+
Sbjct: 1456 V 1456
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 52/381 (13%), Positives = 98/381 (25%), Gaps = 26/381 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH-----EIGH 130
D + T D DV G T+ E G
Sbjct: 1076 GGDHNDTLYGDAEADTLFGDRGNDTLYGGAGDDVLDGGSDSNTLDGGAGDDLLRNYEWGA 1135
Query: 131 AL--GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
+ G +Y GG + D++ + + + S G +I
Sbjct: 1136 SYVSGRWVGSTYAGGRGNDRLQGTRYGDTYRFGLGDGADTIKELDNRSGGSDVLVFGEEI 1195
Query: 189 VA-------------VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLT 234
A ++ + G + + + F T+++ + L
Sbjct: 1196 AASDIERVREGTDLVLRHVNGTDSVRVHRWFDAGGHRLERVEFADGTVWNRSQVEAPGLQ 1255
Query: 235 LIGG-VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
L G + I S + G + + H +++ G +G D + G ++ +
Sbjct: 1256 LTGTPEADTIHGGNISGEVLHGLAGDDVLDGHGGNDTLYGDAGADTLYGGWGHDALHGGT 1315
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCID 352
G D G DT + + ++ +Y D SD L
Sbjct: 1316 GADALHGGDHNDTLY--GDAEADTLFGDRGNDTLYGGAGDDVLDGGSDSNTLDGGAGDDL 1373
Query: 353 SVNVKQRSILEYTAS-YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
N + + G D + ++ + G L S
Sbjct: 1374 LRNYEWGASYVSGRWVGSTYAGGRGNDRLQGTRYGDTYRFGLGDGADTIKELDNRSGGSD 1433
Query: 412 RNVFGSDRGAAARHYITHGVK 432
VFG+ +G
Sbjct: 1434 VLVFGAGIVKEDLWLSRNGDD 1454
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 57/400 (14%), Positives = 90/400 (22%), Gaps = 85/400 (21%)
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
++ I + I A G NG + G + E
Sbjct: 732 ADGTVTVAGTADPEMLIGNEMSNQITGGDGGDVIAGARGADVLRGANGADTLRGGEGADE 791
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN---NIYK--I 209
Y + +G A+ GA G+ +Y
Sbjct: 792 LHGGNDHDTLYGDAGADTLYGGWGND---------ALHGGTGADALHGGDHNDTLYGDAE 842
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T+Y GDD+LD G N +D ++ V
Sbjct: 843 ADTLFGDRGSDTLYGGAGDDVLD---GGSDSNTLDGGAGDDLLRNYEWGASYVSGRWVGS 899
Query: 270 SVVGSSGNDVVIGNSANNV--FFESSGNDVF----DGSSGLDTFFYYAPSYLYKIYRFEN 323
+ G GND + G + F G D + S G D + I R
Sbjct: 900 TYAGGRGNDRLQGTRYGDTYRFGLGDGADTIKELDNRSGGSDVLVFGEEIAASDIERVRE 959
Query: 324 AIIVYDANEHKQDFLS----------DVERLRFADQCI---------------------- 351
+ + + D + +ER+ FAD +
Sbjct: 960 GTDLVLRHVNGTDSVRVHRWFDAGGHRLERVEFADGTVWNRSQVEAPGLQLTGTPEADAI 1019
Query: 352 --------------------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
L ++ L G D H
Sbjct: 1020 HGGNISGEVLHGLAGDDVLDGHGGNDTLYGDAGADTLYGGWGHDALHGGTGADALHGGDH 1079
Query: 386 FYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGA 421
D F + LY G+ DD+ +
Sbjct: 1080 NDTLYGDAEADTLFGDRGNDTLYGGAGDDVLDGGSDSNTL 1119
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 43/333 (12%), Positives = 74/333 (22%), Gaps = 113/333 (33%)
Query: 202 LGNNI---YKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSI 253
G+++ + T+Y G D L L GG N ++
Sbjct: 1033 AGDDVLDGHGGNDTLYGDAGADTLYGGWGHDALHGGTGADALHGGDHNDTLYGDAEADTL 1092
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF-------------------ESSG 294
G N T+ + + G S ++ + G + +++ G
Sbjct: 1093 FGDRGNDTLYGGAGDDVLDGGSDSNTLDGGAGDDLLRNYEWGASYVSGRWVGSTYAGGRG 1152
Query: 295 NDVFDG-----------SSGLDT-------------FFYYAPSYLYKIYRFENAIIVYDA 330
ND G G DT + I R +
Sbjct: 1153 NDRLQGTRYGDTYRFGLGDGADTIKELDNRSGGSDVLVFGEEIAASDIERVREGTDLVLR 1212
Query: 331 NEHKQDFLS----------DVERLRFADQCI----------------------------- 351
+ + D + +ER+ FAD +
Sbjct: 1213 HVNGTDSVRVHRWFDAGGHRLERVEFADGTVWNRSQVEAPGLQLTGTPEADTIHGGNISG 1272
Query: 352 -------------------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
L ++ L G D H
Sbjct: 1273 EVLHGLAGDDVLDGHGGNDTLYGDAGADTLYGGWGHDALHGGTGADALHGGDHNDTLYGD 1332
Query: 393 EGRDITF----DSYLYLGSYDDLRNVFGSDRGA 421
D F + LY G+ DD+ +
Sbjct: 1333 AEADTLFGDRGNDTLYGGAGDDVLDGGSDSNTL 1365
>gi|114640083|ref|XP_001153208.1| PREDICTED: matrix metalloproteinase-20 [Pan troglodytes]
Length = 483
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 59/198 (29%), Gaps = 53/198 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T S ++ + AL WS V L+F + +DI
Sbjct: 117 WKKNILTYRISKYTPSMSSVEVDK-------AVEMALQAWSSAVPLSFVRINSGEADIMI 169
Query: 82 ISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
N + P + +FD A+ W G G L A H
Sbjct: 170 SFENGDHGDSYPFDGPRGTLAHAFAP--GEGLGGDTHFDNAEKWTMGT-NGFNLFTVAAH 226
Query: 127 EIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
E GHALGL H YP Y N Y
Sbjct: 227 EFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKD------------------------- 261
Query: 186 SDIVAVQKIYGAPKGSLG 203
D+ +Q +YG K LG
Sbjct: 262 -DVKGIQALYGPRKAFLG 278
>gi|73950335|ref|XP_544383.2| PREDICTED: similar to matrix metalloproteinase 14
(membrane-inserted) [Canis familiaris]
Length = 741
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 58/212 (27%), Gaps = 56/212 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + W+N+ + + T + E R A W + L F+E
Sbjct: 197 LTGRKWNNHHLTFSIQNYTEKLGWYHSLE-------AVRRAFRVWEQATPLVFQEVPYED 249
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+ +
Sbjct: 250 IRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSST 309
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
G L A+HE+GHALGL H P + Y+ T +
Sbjct: 310 DLHGNSLFLVAVHELGHALGLEHS-----SNPSAIMAPFYQWMDTDTFQLPED------- 357
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
D+ +Q++YG P G
Sbjct: 358 -------------DLRGIQQLYGTPDGQPQPT 376
>gi|260816789|ref|XP_002603270.1| hypothetical protein BRAFLDRAFT_226380 [Branchiostoma floridae]
gi|229288588|gb|EEN59281.1| hypothetical protein BRAFLDRAFT_226380 [Branchiostoma floridae]
Length = 495
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 45/155 (29%), Gaps = 36/155 (23%)
Query: 12 RIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE 71
+A ++L W + I YK T ++ + + A WS L F
Sbjct: 83 DVAPYVLSGTKWHKFQITYKITEYTPRLSQSEV-------RRIMHDAFQIWSDYTPLDFT 135
Query: 72 ETSIH-------------SDIKFISSNN----------GYVCTPRYD------SRYFMEI 102
E + D + P +
Sbjct: 136 EVTSGNADMLIAFPRWDHGDGTPFDGRWDPDRGTGLGLAHAFMPPRSERIAKKYGIDGDT 195
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
+FD + W G +G L A HE GHALGL H
Sbjct: 196 HFDGDEQWTTGTHRGVDLLQVATHEFGHALGLGHT 230
>gi|126327142|ref|XP_001366839.1| PREDICTED: similar to matrix metalloproteinase-12 [Monodelphis
domestica]
Length = 472
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 57/196 (29%), Gaps = 51/196 (26%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIK 80
W Y + Y+ T D+ + A WS V LTF + +DI
Sbjct: 107 TWKKYDLTYRIMNYTPDMTRDDVDY-------AIKRAFEVWSNVTPLTFRRIYTGEADIM 159
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ P + +FD+ + W + +G L A
Sbjct: 160 ISFASGVHGDFSPFDGRDGTLAHAYAP--GPGIGGDAHFDEDESWTRDL-RGYNLFLVAA 216
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GH+LGL H P + Y +S+
Sbjct: 217 HEFGHSLGLDHSND-----PQALMYPTYRRADPRQFRLSHD------------------- 252
Query: 186 SDIVAVQKIYGAPKGS 201
DI +Q +YG P
Sbjct: 253 -DIKGIQALYGGPVNH 267
>gi|302875207|ref|YP_003843840.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578064|gb|ADL52076.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 565
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/352 (15%), Positives = 98/352 (27%), Gaps = 90/352 (25%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + + I E ++ N I T + V G+ GND++ G ++
Sbjct: 123 TVGIDSLNAEGEVIMNGYEGDDTLRSGAGNDKIYGGTGNDQVYGNGGNDLLYGEDGDDKL 182
Query: 290 FESSGNDVFDGSSGLD---------------------------TFFYYAPSYLYKIYRFE 322
+ +G+D+ DG G D T+ + IY +
Sbjct: 183 YGGNGDDILDGGEGKDYLYGENGNDLLDGKNGGGYLEGGAGVDTYIFRKGYGQVNIYEYS 242
Query: 323 NA-----------------------------------IIVYDANEHKQDFLSDVERLRFA 347
+ D +E+++FA
Sbjct: 243 GEANTIIDTLKLEDINPNEISLNCNRYDLIMKLNESKDSITIQGYFSSDLHK-IEKIQFA 301
Query: 348 DQC-------------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D IDS+N + I+ + L G D +
Sbjct: 302 DGTVWDINTIKSSLVYSNGTVGIDSLNAEGEVIMNGYEGDDTLRSGAGNDKIYGGTGNDQ 361
Query: 389 FGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ G D+ + D LY G+ DD+ + Y +G + LE
Sbjct: 362 VYGNGGNDLLYGEDGDDKLYGGNGDDILDGGEGKDYL----YGENGNDLLDGKNGGGYLE 417
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
A ++ I + D D++ ++ V ++ S DL
Sbjct: 418 GGAGNDTYIFSKGDGQDIIYNSSSLDTDNDKLSLNDVNLSETAFIKSNTDLI 469
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/345 (11%), Positives = 95/345 (27%), Gaps = 41/345 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
NG + + D+ G GK + N +
Sbjct: 156 YGGTGNDQVYGNGGNDLLYGEDGDDKLYGGNGDDILDGGEGKDYLYGENGNDLL------ 209
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+G ++ D+++ + + T + DI +
Sbjct: 210 ------DGKNGGGYLEGGAGVDTYIFRKGYGQVNIYEYSGEANTIIDTLKLEDINPNEIS 263
Query: 195 YGAPKGS-------LGNNIYKIEVQQKDSPFIQTIYDSGGDD---------------LLD 232
+ ++I D I+ I + G +
Sbjct: 264 LNCNRYDLIMKLNESKDSITIQGYFSSDLHKIEKIQFADGTVWDINTIKSSLVYSNGTVG 323
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ + I E ++ N I T + V G+ GND++ G ++ +
Sbjct: 324 IDSLNAEGEVIMNGYEGDDTLRSGAGNDKIYGGTGNDQVYGNGGNDLLYGEDGDDKLYGG 383
Query: 293 SGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+G+D+ DG G D + + + + QD + + L
Sbjct: 384 NGDDILDGGEGKDYLYGENGNDLLDGKNGGGYLEGGAGNDTYIFSKGDGQDIIYNSSSLD 443
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + +V ++ + +I++ ++ ++ +G
Sbjct: 444 TDNDKLSLNDVNLSETAFIKSNTDLIIKLNETTDSVTILGYFNYG 488
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 36/313 (11%), Positives = 76/313 (24%), Gaps = 37/313 (11%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I + I + ++ + TV + + G ++ G ++ +GND G +
Sbjct: 100 IQFADGTVWDINTIKSSLVYSNGTVGIDSLNAEGEVIMNGYEGDDTLRSGAGNDKIYGGT 159
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D + D L D IL
Sbjct: 160 GNDQVY----------------------GNGGNDLLYG------EDGDDKLYGGNGDDIL 191
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ + L G D+ + G D Y + +
Sbjct: 192 DGGEGKDYLYGENGNDLLDGKNGGGYLEGGAGVDTYIFRKGYGQVNIYEYSGEANTIIDT 251
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ + + N + + + + +D I +G
Sbjct: 252 LKLEDINPNEISLNCNRYDLIMKLNESKDSITIQG----YFSSDLHKIEKIQFADGTVWD 307
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV---KEGRNPDAFKALEYIASHEDLINA 539
++ Y + G D A I +G R+ + ++ +
Sbjct: 308 INTIKSSLVYSN--GTVGIDSLNAEGEVIMNGYEGDDTLRSGAGNDKIYGGTGNDQVYGN 365
Query: 540 FADAPDLVQAGKD 552
+ + G D
Sbjct: 366 GGNDLLYGEDGDD 378
>gi|260763804|ref|YP_003237843.1| hemolysin A [Escherichia coli O26:H11 str. 11368]
gi|284000230|ref|YP_003377917.1| hemolysin A [Escherichia coli O26:H-]
gi|157688246|gb|ABQ02440.1| enterohemolysin [Escherichia coli]
gi|238801609|gb|ACR56507.1| hemolysin A [Escherichia coli]
gi|257757229|dbj|BAI28730.1| hemolysin A [Escherichia coli O26:H11 str. 11368]
gi|283445170|gb|ADB20514.1| hemolysin A [Escherichia coli O26:H-]
gi|325699397|gb|ADZ45128.1| hemolysin A [Escherichia coli]
Length = 998
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 34/216 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYR 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKAINGVLSFNESND 889
Query: 370 D----LIQVIGQDVFESMKHFYE-FGLSEGRDITFD 400
+D + H E +GR+I D
Sbjct: 890 VNGITFKNWFAKDASGADNHLVEVITDKDGREIKVD 925
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 46/164 (28%), Gaps = 19/164 (11%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G I +E ++G +D G N++F + GND +G+ G D +
Sbjct: 685 FEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLY- 743
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + ++ + D LS D L+ +Y
Sbjct: 744 -GDDGDDYISGGQGDDQLFGGS--GNDKLSG------GDGNNYLTGGSGNDELQAHGAYN 794
Query: 370 DLIQVIGQDVFE---------SMKHFYEFGLSEGRDITFDSYLY 404
L G D + G DI Y
Sbjct: 795 ILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNY 838
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 56/197 (28%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKRVGNDLI 873
>gi|71896459|ref|NP_001025501.1| matrix metallopeptidase 1 [Xenopus (Silurana) tropicalis]
gi|89268617|emb|CAJ82765.1| matrix metalloproteinase 1 (interstitial collagenase) [Xenopus
(Silurana) tropicalis]
Length = 467
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 57/192 (29%), Gaps = 47/192 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + Y+ T D+ + + A WS V LTF + SDI+
Sbjct: 109 WQKTDLTYRIINFTPDLPQADV-------EAAIQRAFKVWSDVTPLTFTRIYNEVSDIEI 161
Query: 82 ISS-----NNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
S +N P + + +FD+ + W L A HE
Sbjct: 162 SFSAGDHKDNSPFDGPGGILAHAFQPGNGIGGDAHFDEDESWTKTSQLYN-LFLVAAHEF 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H S + Y + + DI
Sbjct: 221 GHSLGLSH--------------------STDPGALMYPSYSSTDPN-----AFQLPQDDI 255
Query: 189 VAVQKIYGAPKG 200
A+Q +YG
Sbjct: 256 NAIQYLYGKSSN 267
>gi|47215834|emb|CAG00689.1| unnamed protein product [Tetraodon nigroviridis]
Length = 618
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 42/146 (28%), Gaps = 31/146 (21%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L WS + Y T ++ E R A W V LTF+E
Sbjct: 79 LTGHKWSKNRLTYSIQNYTPKIGEYNSYE-------AIRRAFKVWEGVTPLTFDEIPYQE 131
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+
Sbjct: 132 IKYGRRKEPDIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGMGGDTHFDSDEPWTIGNQ 191
Query: 114 IGKGTILSHNALHEIGHALGLMHPGS 139
+G L A+HE+GHALGL H +
Sbjct: 192 NIQGNDLFLVAVHELGHALGLEHSNN 217
>gi|237746569|ref|ZP_04577049.1| MadA protein [Oxalobacter formigenes HOxBLS]
gi|229377920|gb|EEO28011.1| MadA protein [Oxalobacter formigenes HOxBLS]
Length = 3643
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 70/228 (30%), Gaps = 2/228 (0%)
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L + G + Y + T ++ + +
Sbjct: 3349 LTYHFDSIGEQGDIAGQYGTLHYDATNHRYEYTLDMSEANLHKLAQDDTLAQANGETLHE 3408
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+G + + + T S D+L + I ++
Sbjct: 3409 AFGYRVTDAAHPDGVEGTFDVNLNGLNTAPGSSETDVLG--DTTVDHSQILFGEGGNDTL 3466
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N ++ +++ G G+DV+ G N++ +G+DV G G DTF ++A
Sbjct: 3467 HGGHGNDYLSGGDGDDALYGGEGHDVLQGGDGNDILVGGAGDDVLTGGLGSDTFRWHAGD 3526
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
R ++ + N D L E L+ + ++ ++
Sbjct: 3527 LDGGRDRGDHITDFHLGNNGNGDVLDIGELLQGVESTGQLIHGGFLNL 3574
Score = 41.3 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 55/466 (11%), Positives = 116/466 (24%), Gaps = 38/466 (8%)
Query: 3 NIKPVYTTERIADHLLRDQYWSNYFIRYKPDV---LTTHRLSFDITELNPNAQEVARWAL 59
+ YT + A L + + + F D T ++ +I N +
Sbjct: 3140 DGHYTYTPDDRAQALGQGEKATETFTVTVDDGHGGTATQTITVNIAGANDAPVVDTYTS- 3198
Query: 60 GEWSKVVDLTFEET--SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
F + + + I+++ D+ + + KG
Sbjct: 3199 DAEENTGGFAFTDVDVNDTHSLSIITADGQPHTVTLDDTGLSGTVTIAGLGDFVLNGTKG 3258
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
+ + + + + V + + + +
Sbjct: 3259 ENGKIDWSYSFTASDEAKNSVAAGTTGLVNVQIQVSDGHESALTGNLTVGIDGTNALSGD 3318
Query: 178 GYCATPMVSDIVAVQKIYGA-PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL- 235
A ++ + A I G P ++ I G D T
Sbjct: 3319 AGAANMSLASLSADMAITGILPATDTEGDMLTYHFDSIGEQG--DIAGQYGTLHYDATNH 3376
Query: 236 ---IGGVKNYIDLNTESWSSIGGYEKNMTI--AQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ +L+ + T+ A + G + + N
Sbjct: 3377 RYEYTLDMSEANLHKLAQDDTLAQANGETLHEAFGYRVTDAAHPDGVEGTFDVNLN---- 3432
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
G + GSS D + ++ ++ H D+LS D
Sbjct: 3433 ---GLNTAPGSSETDVLGDTTVDHSQILFGEGGNDTLHGG--HGNDYLSG------GDGD 3481
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF--------GLSEGRDITFDSY 402
+ +L+ + L+ G DV F G + D D +
Sbjct: 3482 DALYGGEGHDVLQGGDGNDILVGGAGDDVLTGGLGSDTFRWHAGDLDGGRDRGDHITDFH 3541
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
L D+ ++ +G + + HG D A+
Sbjct: 3542 LGNNGNGDVLDIGELLQGVESTGQLIHGGFLNLQIDKVDKDTGSAT 3587
>gi|26990554|ref|NP_745979.1| calcium-binding protein, hemolysin-type [Pseudomonas putida KT2440]
gi|24985534|gb|AAN69443.1|AE016580_2 calcium-binding protein, hemolysin-type [Pseudomonas putida KT2440]
Length = 768
Score = 66.3 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/410 (13%), Positives = 112/410 (27%), Gaps = 20/410 (4%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
T + S G + I + + G SG+D++ G +++ +G D+ G G DT
Sbjct: 347 TSAGDSFSGSSRADWIVGGDGNDELKGLSGDDMLEGGDGDDILDGGTGADIMIGGQGNDT 406
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
++ + I ++ + + I+ + L
Sbjct: 407 YYVDWGNDKVIETSSAGGIDTVISSVSRTLGAYQENLVLTGSSAINGTGNNLANTLTGND 466
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L G D+ + + G D ++ G D + + G +
Sbjct: 467 ADNVLNGGAGADIMVGGLGNDTYYVDWGNDKVIETSA-NGGIDTIISSVSRTLGDYQENL 525
Query: 427 ITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFS-----NFGCEEGR 479
+ G A ++ D L + +G D + + E
Sbjct: 526 VLTGTAALYGNGNNLANTLTGNNGDNVLNGGAGADTMIGGLGNDTYYVDWGNDKVIETSA 585
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI---ASHEDL 536
D+ + S + +Y G A + A ++ L
Sbjct: 586 NGGIDTVISSVSRTLGDHQENLVLTGTKANYG-TGNSLDNTLTGNGADNLLNGGAGNDTL 644
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYIT 596
+ + + GKD G FN + +D +
Sbjct: 645 VGGAGNDRLVGDLGKD--VLTGGAGNDVFAFNTTK-ESGLTSTAWDVITDFKRGSDKIDV 701
Query: 597 HGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
G+ A + + LS A L+F LY + D
Sbjct: 702 SGID---ANTTTNTNEAFNVVLSGAKTFTAAGQLNF--VDGVLYGNTDSD 746
>gi|311257207|ref|XP_003127010.1| PREDICTED: matrix metalloproteinase-15-like [Sus scrofa]
Length = 656
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 59/212 (27%), Gaps = 56/212 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + W+N+ + + T + E R A W + L F+E
Sbjct: 115 LTGRKWNNHHLTFSIQNYTEKLGWYHSLE-------AVRRAFRVWEQATPLVFQEVPYED 167
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+ +
Sbjct: 168 IRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSST 227
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
G L A+HE+GHALGL H + + + D +N
Sbjct: 228 DLHGNSLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDIDN------------------ 269
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
F D+ +Q++YG P G
Sbjct: 270 ---FQLPE----DDLRGIQQLYGTPDGQPQPT 294
>gi|268679630|ref|YP_003304061.1| hypothetical protein Sdel_0997 [Sulfurospirillum deleyianum DSM
6946]
gi|268617661|gb|ACZ12026.1| hypothetical protein Sdel_0997 [Sulfurospirillum deleyianum DSM
6946]
Length = 582
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 68/209 (32%), Gaps = 13/209 (6%)
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G + D + S + S + Y A ++ ++
Sbjct: 128 EGQTWPTSNADDADKSLYNYLFGNTSGWSSSNASKGNYDAIYGSNNDDILRGDSNTDAIY 187
Query: 202 LG---NNIYKIE--VQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWS 251
G ++IY + I SGG+D ++ TL GG L
Sbjct: 188 GGGGKDDIYGGSLAEKLYGGEGDDFIDGSGGNDTIEGAEGKDTLDGGDGTDTLLGGTGDD 247
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + T+ +++ G SG D ++G + N+ G D +G +G DT
Sbjct: 248 NLFGDAGDDTLNGGEDNDTLNGGSGLDTLLGEAGNDTLIGGGGADTLNGGTGSDTLL--- 304
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSD 340
Y Y N + D++ +
Sbjct: 305 GGDDYDTYIAGNGDTINDSDGSGRVTFEG 333
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 74/291 (25%), Gaps = 53/291 (18%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
FE + + + + Y S + YG IL
Sbjct: 126 DFEGQTWPTSNADDADKSLYNYLFGNTSGWSSSNASKGNYDAIYGSNNDDILRG------ 179
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
DS DA +G +
Sbjct: 180 -----------------------------------------DSNTDAIYGGGGKDDIYGG 198
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
+K+YG + + + T+ G D L +GG +
Sbjct: 199 SLAEKLYGGEGDDFIDGS-GGNDTIEGAEGKDTLDGGDGTDTL----LGGTGDDNLFGDA 253
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G E N T+ + +++++G +GND +IG + +G+D G DT +
Sbjct: 254 GDDTLNGGEDNDTLNGGSGLDTLLGEAGNDTLIGGGGADTLNGGTGSDTLLGGDDYDT-Y 312
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+ + + D + + +
Sbjct: 313 IAGNGDTINDSDGSGRVTFEGGILNGGKWNKDTQTYEGNGGNYNLNDGTLT 363
Score = 41.3 bits (95), Expect = 0.48, Method: Composition-based stats.
Identities = 16/178 (8%), Positives = 35/178 (19%), Gaps = 3/178 (1%)
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEY 364
+ + + + + D L S+ + + D L
Sbjct: 147 YLFGNTSGWSSSNASKGNYDAIYGSNNDDILRGDSNTDAIYGGGGKDDIYGGSLAEKLYG 206
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ + G D E + +G D + D + +
Sbjct: 207 GEGDDFIDGSGGNDTIEGAEGKDTLDGGDGTDTLLGGTGDDNLFGDAGDDTLNGGEDNDT 266
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
G+ L + L L D + +
Sbjct: 267 LNGGSGLDTLLGEAGNDTLIGGGGADTLNGGTGSDTLLGGDDYDTYIAGNGDTINDSD 324
>gi|126658492|ref|ZP_01729640.1| hypothetical protein CY0110_21245 [Cyanothece sp. CCY0110]
gi|126620234|gb|EAZ90955.1| hypothetical protein CY0110_21245 [Cyanothece sp. CCY0110]
Length = 868
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/323 (15%), Positives = 93/323 (28%), Gaps = 27/323 (8%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF-------DGSSGL 304
+ G + I + + G GND + G +N G+DV +G G
Sbjct: 188 TFTGTAGDDNITGTAENDVIDGLGGNDTLDGAGGSNTIRGGDGDDVIINIFGSVNGGEGN 247
Query: 305 DTFFYYAPSYL-------YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS---- 353
DT + + I N I + ++ E++ ++
Sbjct: 248 DTLNLDYTNATHPNFVNGFGIDNPSNTQIFTRSGNLFLLSYANFEQINITGTSLNDVLTG 307
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
++ S L + L G DV + L+ ++ S D +
Sbjct: 308 IDRSGNSSLNGGQGNDTLRGEAG-DVLDGGAGEDSLDLNLSNATNTINWTLDLSNTD--S 364
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
D A+++ G D + + + D V + D
Sbjct: 365 QLQGDSNTQAKNFELIGSI--TTGDGDDNIILSGEDDAVTINTGLGNDTVTLIHDGGVIT 422
Query: 474 GCEEGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE--Y 529
G G T + ++ + N FG D + + + G + F+ L
Sbjct: 423 GSVNGGEGNDTLNLDYTNATHPNFVNGFGIDNPSNTQIFTRSGNSFLLSYSNFEQLNITG 482
Query: 530 IASHEDLINAFADAPDLVQAGKD 552
++DL + G D
Sbjct: 483 TNLNDDLRGFAGNDTLNGGEGND 505
Score = 40.5 bits (93), Expect = 0.86, Method: Composition-based stats.
Identities = 36/277 (12%), Positives = 71/277 (25%), Gaps = 17/277 (6%)
Query: 69 TFEETSIHSDI---KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
FE+ +I + + + DV G G+ ++ + +
Sbjct: 290 NFEQINITGTSLNDVLTGIDRSGNSSLNGGQGNDTLRG-EAGDVLDGGAGEDSLDLNLSN 348
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
L + + + + T +
Sbjct: 349 ATNTINWTLDLSNTDSQLQGDSNTQAKNFELIGSITTGDGDDNIILSGEDDAVTINTGLG 408
Query: 186 SDIVAVQKIYGAPKGSL----GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+D V + G GS+ GN+ ++ P + + G
Sbjct: 409 NDTVTLIHDGGVITGSVNGGEGNDTLNLDYTNATHPNFVNGFGIDNPSNTQIFTRSGNSF 468
Query: 242 YID---------LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ T + G+ N T+ +++ G GND + G +A N
Sbjct: 469 LLSYSNFEQLNITGTNLNDDLRGFAGNDTLNGGEGNDALNGGDGNDRISGVNAGNALPGI 528
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ D G G D F + Y + D
Sbjct: 529 NEIDRLTGGIGADAFILGDIANPYYDDDNNTTSGLTD 565
>gi|226200962|ref|YP_002756566.1| hemolysin transport protein [Escherichia coli]
gi|219881591|gb|ACL51961.1| hemolysin transport protein [Escherichia coli]
Length = 998
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 34/216 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYR 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKAINGVLSFNESND 889
Query: 370 D----LIQVIGQDVFESMKHFYE-FGLSEGRDITFD 400
+D + H E +GR+I D
Sbjct: 890 VNGITFKNWFAKDASGADNHLVEVITDKDGREIKVD 925
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 46/164 (28%), Gaps = 19/164 (11%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G I +E ++G +D G N++F + GND +G+ G D +
Sbjct: 685 FEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLY- 743
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + ++ + D LS D L+ +Y
Sbjct: 744 -GDDGDDYISGGQGDDQLFGGS--GNDKLSG------GDGNNYLTGGSGNDELQAHGAYN 794
Query: 370 DLIQVIGQDVFE---------SMKHFYEFGLSEGRDITFDSYLY 404
L G D + G DI Y
Sbjct: 795 ILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNY 838
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 56/197 (28%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKRVGNDLI 873
>gi|257059581|ref|YP_003137469.1| Ig family protein [Cyanothece sp. PCC 8802]
gi|256589747|gb|ACV00634.1| Ig family protein [Cyanothece sp. PCC 8802]
Length = 395
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 80/273 (29%), Gaps = 11/273 (4%)
Query: 243 IDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
IDL S S + G +N+T+ + I+ G++ N+ + GNS NN+ SGND G
Sbjct: 27 IDLVYSSVSYTLSGNLENLTLTGSSNID-GTGNNFNNYITGNSGNNILDGQSGNDTLVGG 85
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G DT+ + + R + V + + + + + I+ ++
Sbjct: 86 AGNDTYIIDSLGDVIIELRNQGIDTVMASVTYTMNSSTLENLILTGTNSINGTGNFSSNL 145
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY-------LGSYDDLRNV 414
L + L G D + D + D +
Sbjct: 146 LIGNSGNNILDGSYGNDTLDGGLGMDTLKGGFDNDTYMVDTVDDVIIENLGEGTDTVNAS 205
Query: 415 FGSDRGAAARHYITHG--VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
F G + G G + + + L + L G D
Sbjct: 206 FSYTLGNNLENLTLTGTNNLNGTGNSLNNVITGNSGNNILRANAGNDTLLGGNGTDELWG 265
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ ++ G D A
Sbjct: 266 GQGSDSLTGGEGRDYFIFGGVANFGELGVDSVA 298
Score = 43.6 bits (101), Expect = 0.097, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 73/262 (27%), Gaps = 23/262 (8%)
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
VY + + + ++ D + Y ++I+ Q G GN+
Sbjct: 30 VYSSVSYTLSGNLENLTLTGSSNIDGTGNNFNNYITGNSGNNILDGQSGNDTLVGGAGND 89
Query: 206 IYKIEV---------QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
Y I+ Q + ++ + L+ ++ G + S + + G
Sbjct: 90 TYIIDSLGDVIIELRNQGIDTVMASVTYTMNSSTLENLILTGTNSINGTGNFSSNLLIGN 149
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N + +++ G G + ND + + D
Sbjct: 150 SGNNILDGSYGNDTLDGGLG---------MDTLKGGFDNDTYMVDTVDDVIIENLGEGTD 200
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID--SVNVKQRSILEYTASYEDLIQV 374
+ + N + L+ L ++ +IL A + L+
Sbjct: 201 TV---NASFSYTLGNNLENLTLTGTNNLNGTGNSLNNVITGNSGNNILRANAGNDTLLGG 257
Query: 375 IGQDVFESMKHFYEFGLSEGRD 396
G D + EGRD
Sbjct: 258 NGTDELWGGQGSDSLTGGEGRD 279
>gi|329903526|ref|ZP_08273539.1| putative hemolysin-adenlyate cyclase protein [Oxalobacteraceae
bacterium IMCC9480]
gi|327548309|gb|EGF33000.1| putative hemolysin-adenlyate cyclase protein [Oxalobacteraceae
bacterium IMCC9480]
Length = 1732
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 13/179 (7%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
++ + + +S+ + + +++ G +GND + G N+ F
Sbjct: 1424 FVGSNYADTFVLADAGTVTSVDAGSGDDIVTGSIQNDTLRGGTGNDTLSGGGGNDALFGQ 1483
Query: 293 SGNDVFDGSSGLDTFFYYAPS--------YLYKIYRFENAIIVYD----ANEHKQDFLSD 340
+GND+ DG +G D YY ++ N + + D L++
Sbjct: 1484 AGNDIIDGGAGTDVAQYYQSFDPTSSGAIANFRFADLGNGWLQVTDSRSGSPAGTDQLTN 1543
Query: 341 VERLRFADQCID-SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
VE + F+D ++ L T + L+ G D G D
Sbjct: 1544 VESMLFSDGSVNLLQGTAGNDTLTGTVGRDVLLGGAGDDTLTGGGAADWLFGGAGNDTL 1602
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 55/221 (24%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + + G D + G N+ + D DG +G+DT Y +
Sbjct: 647 GGNGNDKLTGSSGDNFLSGGLLGDDLKGMDGNDTLDGGADGDSLDGGNGIDTATYASSGA 706
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + D L +E L + + ++L + + L
Sbjct: 707 GVTVDLRLAGTTQTATGDTLGDILVSIENLTGSAYNDILIGDSGNNVLTGGSGNDTLTGN 766
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D + + L + G + +
Sbjct: 767 GGNDTLDGGAGIDTASYTASAQGVTVDLTLLTPQVSSGDASGDVLTGIENVFGSATGSNL 826
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
D L + D IN + + G
Sbjct: 827 LTGDGAANLLVGGAGNDTINGGGGDDTINAGAGIDVLDGGS 867
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 76/297 (25%), Gaps = 12/297 (4%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
+G I D+ G + + G
Sbjct: 192 AVLTGQTSGGDANGDVLGGIENLIGSGFNDLLTGDTGDNRLDGGAGDDVLEGGAGADTLI 251
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
G Y + + ++ Y ++ + G
Sbjct: 252 GG--ANSAVGDTASYAGSASAITAYLDASGINTGDAFGDTYSGIENLTGSGYADTLTGDT 309
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ + + + G D + ++L S
Sbjct: 310 GNNRLDGGAG-DDVLIGGRGADVLIGGAGIDTISYLG-SVSGVTVNLANGVGSGGEAQGD 367
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ IE++ GS+ +D + G+ +N+ G D DG +G+DT Y + I
Sbjct: 368 TF-----SGIENITGSNYDDTLTGDGGDNLLIGGIGADTLDGGTGIDTADYSSSGAGISI 422
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + + D L+++E + V ++L A + +
Sbjct: 423 NLNGGSGA---GGDAQGDTLANIENVTGTAYNDVFVASSAANVLRGGAGIDTVSYAA 476
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/343 (13%), Positives = 93/343 (27%), Gaps = 10/343 (2%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNY---IDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ + G D L + L + + + I + +
Sbjct: 3 EGGGGADVLDGGAGIDTLGYAGSQEGVSVNLAAGLASGGDAEGDTFVNVENILGSSFDDI 62
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +G++++ G S N+ +G D+ +G +G D Y A + + +
Sbjct: 63 LTGDTGDNLLSGGSGNDHLSGGAGADILNGGAGSDWADYTASAAGVSVNLATSG---MAG 119
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ D L +E L ++ + L + L G DV
Sbjct: 120 GDAAGDTLISIENLGGSNSGDILTGDAGNNQLSGLGGDDLLDGGAGADVLIGGSGNDTVT 179
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
L + + D + I G + D + +
Sbjct: 180 YG-SSSAGVSVNLAVLTGQTSGGDANGDVLGGIENLIGSGFNDLLTGDTGDNRLDGGAGD 238
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
D++ A A L+ + G + YL + D + +
Sbjct: 239 DVLEGGAGADTLIGGANSAVGDTASYAGSASAITA--YLDASGINTGDAFGDTYSGIENL 296
Query: 511 ITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G + L+ A + LI + AG D
Sbjct: 297 TGSGYADTLTGDTGNNRLDGGAGDDVLIGGRGADVLIGGAGID 339
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 43/289 (14%), Positives = 83/289 (28%), Gaps = 14/289 (4%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-YRFENA 324
+ E ++GS+ D + G++ NNV G D DG +G DT Y A S + +A
Sbjct: 1113 SGFEKLIGSAYADTLTGDAGNNVLVGLGGADRLDGGAGTDTADYSASSAGVTVNLSLSSA 1172
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFESM 383
+ DFL+++E + + +++ ++L + + D
Sbjct: 1173 TAQTSTGDASGDFLANIENVTGSATQANTLTGDANANVLTGGTGDDVISGGGSSDTLIGG 1232
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
G D + G +L G A+ +++ ++ +
Sbjct: 1233 AGADTLDGGNGSDTVSYAGSSAGVTVNLAIQTQISTGDASGDKLSN-IENLIGSAFDDMI 1291
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
AS L G +T + D + +
Sbjct: 1292 TGTASGNVLDGGAGTDTLSYAASAA-----GVTVNLSLTTGQVSAGDASGDNLSNIENVI 1346
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G+A + G A + + G D
Sbjct: 1347 GSATQGNTLTGDANANVLTG------GAGADTFTGGAGVDSFVGGGGID 1389
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/368 (12%), Positives = 96/368 (26%), Gaps = 27/368 (7%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-IDLNTESWSSIGGYEKNMTIA---- 263
+ G D D + + L++ + + G +A
Sbjct: 1132 GNNVLVGLGGADRLDGGAGTDTADYSASSAGVTVNLSLSSATAQTSTGDASGDFLANIEN 1191
Query: 264 ------------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G +G+DV+ G +++ +G D DG +G DT Y
Sbjct: 1192 VTGSATQANTLTGDANANVLTGGTGDDVISGGGSSDTLIGGAGADTLDGGNGSDTVSYAG 1251
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
S + + D LS++E L + ++L+ A + L
Sbjct: 1252 SSAGVTVNLAI--QTQISTGDASGDKLSNIENLIGSAFDDMITGTASGNVLDGGAGTDTL 1309
Query: 372 IQVIGQD----VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
G + G +++ + + ++
Sbjct: 1310 SYAASAAGVTVNLSLTTGQVSAGDASGDNLSNIENVIGSATQGNTLTGDANANVLTGGAG 1369
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
G D+F I + + + +L+ + + F
Sbjct: 1370 ADTFTGGAGVDSFVGGGGIDTVSYVDASAGITINLITSVQTGAAAGEIYSSIEF-FVGSN 1428
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEG---RNPDAFKALEYIASHEDLINAFADAP 544
Y ++ + A + I G + R L ++ L +
Sbjct: 1429 YADTFVLADAGTVTSVDAGSGDDIVTGSIQNDTLRGGTGNDTLSGGGGNDALFGQAGNDI 1488
Query: 545 DLVQAGKD 552
AG D
Sbjct: 1489 IDGGAGTD 1496
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 52/496 (10%), Positives = 108/496 (21%), Gaps = 52/496 (10%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ Y T D+ + + AD G G T + + L L +
Sbjct: 1120 GSAYADTLTGDAGNNVLVGLGGADRLDGGAGTDTADYSASSAGVTVNLSLSSATAQTSTG 1179
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
G + A + D A G +
Sbjct: 1180 DASGDFLANIEN-----------------VTGSATQANTLTGDANANVLTGGTGDDVISG 1222
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
T+ G D + S+ +
Sbjct: 1223 G--GSSDTLIGGAGADTLDGGNGSDTVSYAGSSAGVTVNLAIQTQISTGDASGDKL---- 1276
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ IE+++GS+ +D++ G ++ NV +G D ++ ++ + +
Sbjct: 1277 -SNIENLIGSAFDDMITGTASGNVLDGGAGTDTLSYAASAAGVTVNLSLTTGQVSAGDAS 1335
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E+ + L A + + G D +
Sbjct: 1336 GDNLSNIENVIGSATQGNTLTGDANANVLTGGAGADTFTGGAGVDSFVGGGGIDTVSYVD 1395
Query: 385 HFYEFGLSEGRDI-------------------TFDSYLYLGSYDDLRNVFGSDRGAAARH 425
++ + + L + +V
Sbjct: 1396 ASAGITINLITSVQTGAAAGEIYSSIEFFVGSNYADTFVLADAGTVTSVDAGSGDDIVTG 1455
Query: 426 YITH-------GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
I + G AL A ++ + D S+
Sbjct: 1456 SIQNDTLRGGTGNDTLSGGGGNDALFGQAGNDIIDGGAGTDVAQYYQSFDPTSSGAIANF 1515
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARH--YITHGVKEGRNPDAFKALEYIASHEDL 536
RF + + + G+D+ + V + L + L
Sbjct: 1516 RFADLGNGWLQVTDSRSGSPAGTDQLTNVESMLFSDGSVNLLQGTAGNDTLTGTVGRDVL 1575
Query: 537 INAFADAPDLVQAGKD 552
+ D D
Sbjct: 1576 LGGAGDDTLTGGGAAD 1591
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 31/100 (31%), Gaps = 3/100 (3%)
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ G DV DG +G+DT Y + + + + D +VE + +
Sbjct: 1 MLEGGGGADVLDGGAGIDTLGYAGSQEGVSVNLAAG---LASGGDAEGDTFVNVENILGS 57
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
++L + + L G D+
Sbjct: 58 SFDDILTGDTGDNLLSGGSGNDHLSGGAGADILNGGAGSD 97
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 35/276 (12%), Positives = 65/276 (23%), Gaps = 23/276 (8%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL--------- 132
+ + + D + G G T+ +A I L
Sbjct: 1354 TLTGDANANVLTGGAGADTFTGGAGVDSFVGGGGIDTVSYVDASAGITINLITSVQTGAA 1413
Query: 133 --------------GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
V VD +D S+ + + + D G
Sbjct: 1414 AGEIYSSIEFFVGSNYADTFVLADAGTVTSVDAGSGDDIVTGSIQNDTLRGGTGNDTLSG 1473
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
+ I G + + + D G L G
Sbjct: 1474 GGGNDALFGQAGNDIIDGGAGTDVAQYYQSFDPTSSGAIANFRFADLGNGWLQVTDSRSG 1533
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
D T S + + +++ G+ G DV++G + ++ D
Sbjct: 1534 SPAGTDQLTNVESMLFSDGSVNLLQGTAGNDTLTGTVGRDVLLGGAGDDTLTGGGAADWL 1593
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
G +G DT + L + I+
Sbjct: 1594 FGGAGNDTLVATDATNLAQADGGGGTDILKLTGTAS 1629
>gi|260836059|ref|XP_002613024.1| hypothetical protein BRAFLDRAFT_266228 [Branchiostoma floridae]
gi|229298407|gb|EEN69033.1| hypothetical protein BRAFLDRAFT_266228 [Branchiostoma floridae]
Length = 494
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 62/202 (30%), Gaps = 50/202 (24%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L + W + Y+ + ++ A W +V L F TS S
Sbjct: 96 LTGRKWDKTHLTYRLINTSPQLD-------RAEVEDAIYRAFRIWEQVTPLRFSRTSGTS 148
Query: 78 DIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI+ + P + + +FD+++ W +GT L
Sbjct: 149 DIEISFVQFSHGDGNPFDGRGGTLAHAYFP--GTGIGGDAHFDESEQWTVRTARGTNLFI 206
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH+LGL H G +Y Y D L
Sbjct: 207 VAAHEFGHSLGLEHSQ--VLGALMYPFYQGYVEDFQLDY--------------------- 243
Query: 183 PMVSDIVAVQKIYGAPKGSLGN 204
DI+ +Q IYG L +
Sbjct: 244 ---DDILGIQTIYGTVASFLLD 262
>gi|13937109|gb|AAK50053.1|AF363363_1 RTX-toxin IIIA [Actinobacillus pleuropneumoniae]
Length = 1052
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 11/130 (8%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G+D++ GN +++ + GND G +G D + K+ + +
Sbjct: 754 GADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLY--GGEGNDKLLGGNGNNYLSGGDG 811
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH--FYEFG 390
+ E + K L ++ + L G D E FY +
Sbjct: 812 -------NDELQVLGNGFNVLRAGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYR 864
Query: 391 LSEGRDITFD 400
+ G +D
Sbjct: 865 STSGNHTIYD 874
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 6/120 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + +Y G+D L GG N L + + G + N +
Sbjct: 757 GDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGNDKLLGGNGNNYLSGGDGNDELQ 816
Query: 264 Q-HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G+D + G+S +++ GND +G G D + Y + S + IY
Sbjct: 817 VLGNGFNVLRAGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYRSTSGNHTIYDQG 876
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 48/154 (31%), Gaps = 8/154 (5%)
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D L VE + ++Q + K R I + L G D+ K E G
Sbjct: 725 HDELHSVEEIIGSNQRDEFKGSKFRDIFHGADGDDLLNGNDGDDILYGDKGNDELRGDNG 784
Query: 395 RDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
D + + L G+ ++ + + + ++ G+ Y +S
Sbjct: 785 NDQLYGGEGNDKLLGGNGNNYLSGGDGNDELQVLGNGFNVLRAGKG----DDKLYGSSGS 840
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
DL++ L F + G +D
Sbjct: 841 DLLDGGEGNDYLEGGDGSDFYVYRSTSGNHTIYD 874
Score = 39.8 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 41/241 (17%), Positives = 65/241 (26%), Gaps = 37/241 (15%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIVYDANEHKQ 335
+ N+ F ++G+ G D +Y + V
Sbjct: 627 HLGNGNDKVFLAAGSAEIHAGEGHDVVYYDKTDTGLLVIDGTKATEQGRYSVTRELSGAT 686
Query: 336 DFLSDV------------ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
L +V E L + D + + S E++I +D F+
Sbjct: 687 KILREVIKNQKSAVGKREETLEYRDYELTQSGNSNLKAHDELHSVEEIIGSNQRDEFKGS 746
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
K F ++G DDL N D Y G E R + L
Sbjct: 747 KFRDIFHGADG--------------DDLLNGNDGDDIL----YGDKGNDELRGDNGNDQL 788
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHF--SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
++ L+ + G D G R D LY S DL +
Sbjct: 789 YGGEGNDKLLGGNGNNYLSGGDGNDELQVLGNGFNVLRAGKGDDKLYGSSGSDLLDGGEG 848
Query: 502 D 502
+
Sbjct: 849 N 849
>gi|262155717|ref|ZP_06028842.1| autotransporter adhesin [Vibrio cholerae INDRE 91/1]
gi|262030492|gb|EEY49131.1| autotransporter adhesin [Vibrio cholerae INDRE 91/1]
Length = 1535
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 49/180 (27%), Gaps = 13/180 (7%)
Query: 230 LLDL---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + I+++ +++ G + A + G G+DV +
Sbjct: 1341 TFDFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKS 1400
Query: 287 NVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N+F GND + G G DT A + + + D
Sbjct: 1401 NIFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDT 1459
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
S + + + + + + G D ++ G D+
Sbjct: 1460 GSGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDV 1519
>gi|163733663|ref|ZP_02141105.1| protein containing FG-GAP repeats [Roseobacter litoralis Och 149]
gi|161392774|gb|EDQ17101.1| protein containing FG-GAP repeats [Roseobacter litoralis Och 149]
Length = 1523
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/164 (12%), Positives = 41/164 (25%), Gaps = 13/164 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I G+D + + L G N I G + N +
Sbjct: 1276 SGNDFLSGQDGADWISGGRGNDEVLGGVGEDRLFGNSGNDFLSGQAGADWISGGQGNDQM 1335
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYL 315
+ ++G G+D + + +++ ND G G D + L
Sbjct: 1336 RGGAGNDQLIGGEGDDKIEAGNGHDILRGGIDNDRLYGGLGDDRLYGSDGDDVLQGGLGL 1395
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+ A+ V+ + D +
Sbjct: 1396 DYLNGGAGEDTFVFASATSS-IAGAVDVIDGIDGVGVAGGDLID 1438
>gi|310816913|ref|YP_003964877.1| beta-lactamase, putative [Ketogulonicigenium vulgare Y25]
gi|308755648|gb|ADO43577.1| beta-lactamase, putative [Ketogulonicigenium vulgare Y25]
Length = 939
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 75/548 (13%), Positives = 136/548 (24%), Gaps = 47/548 (8%)
Query: 37 THRLSFDITELNPNAQEVAR-----WALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCT 91
F I +L P + +AR + +T + S G + T
Sbjct: 277 GGDDGFTIFQLLPGGRLIARAHVPDTIEAGLQNITAITASSGADDITFHIASGVEGGIST 336
Query: 92 ----PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
P + DV G A G +
Sbjct: 337 FRWAPDGTTTTNGRAGGLGDDVIVDPGGARAFTGGAGADLFVIAAGRQVKSITDFTLGED 396
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP-----MVSDIVAVQKIYGAPKGSL 202
+D ++ + + + T DI + +
Sbjct: 397 RIDLSKWGMIRSLDQLTLTTTETGFQVSYGNFNLTVHSANGQPIDIANLSITDLINLTHI 456
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ K V + + +GG D+L + ++ E N +
Sbjct: 457 PPTLPKTNVAVPSAASEDMLIGTGGHDVLQA-------------GDGGVTVYALEGNDIV 503
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ ++G GND + G + NN F GN++ G +G D I
Sbjct: 504 IGGAGNDILIGGLGNDHLEGVAGNNYIFGGPGNNMIIGGTGNDILV-GGAGSNTIIAGGG 562
Query: 323 NAIIVYDANEHKQDFLSDVERLRF---ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
N II A + + + + ++ ++ I +
Sbjct: 563 NNIIYDGAGPDRMVSGPGANLFVLMRDSQPDVIEGFQLGKDRIDLSSWGASGIAALNISQ 622
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
S FG T D + + ++F + A + A
Sbjct: 623 TASGA-IIRFGAELLEIFTADQKPLDLAALNYDDLFATALPAPLPPVQATRGQNFGGTSA 681
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE----GRFVTF------DSYLYL 489
+L ++ L + G D + GR D ++
Sbjct: 682 SDSLAGTQFNDTLRGYGGNDVLFGWDGDDTLYGNAGNDWLIGGRGADTMYGGVGDDNYHV 741
Query: 490 GSYDDLR---NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAP 544
D+ G+D A Y E L + D L+ + D
Sbjct: 742 DDPGDMVIENPDQGNDTVYAEITYTLPANVENLRLLGDANLNGYGNELDNLLVGNYGDNY 801
Query: 545 DLVQAGKD 552
AG D
Sbjct: 802 LEGGAGND 809
>gi|330890711|gb|EGH23372.1| calcium binding hemolysin protein [Pseudomonas syringae pv. mori str.
301020]
Length = 1688
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/432 (12%), Positives = 100/432 (23%), Gaps = 70/432 (16%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + T + + DV G G T+ A G
Sbjct: 693 GGAGRDTLYGDDGADTLLGGADNDSLAGGNGDDVLDGGTGNDTLEGGKGSDTYIFAKGAG 752
Query: 136 HPGSYNGG--------------YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
N + D +S V + + + F +
Sbjct: 753 SDAIDNSSYNDITANKLDVVRLDGLNSEDVSLRRESDDLIVQVRQTGESLRIRSHFASDS 812
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
I ++ G ++ + G D D +
Sbjct: 813 GSWSYAIDQLKFADGTIWDRAHITAALLDGTDGNDTIT-------GYDTADTLSGLAGND 865
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
++ + G + ++ + ++G +GND + G N+ +GND +G
Sbjct: 866 TLNGRNG-NDLLDGGDGKDSLNGEAGDDFLLGGAGNDTLSGGEGNDTLDGGTGNDSLEGG 924
Query: 302 SGLDTFFYYAPSYLYKIYRFENAII----------------------------------- 326
G DT+ + S +Y +
Sbjct: 925 IGSDTYIFRKGSGQDIVYNYAYNESTPNKLDVVRLEGLTAEDVSIRRESDDLVIQIRQTG 984
Query: 327 ----VYDANEHKQDFLSDVERLRFADQCI---------DSVNVKQRSILEYTASYEDLIQ 373
V Q + + +L+FAD + + + + A+ ++L
Sbjct: 985 ETLRVSSHFAVDQTYGYAINQLQFADGTVWDQAKITSALLIGTEGSDSIIGYATADELAG 1044
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+ G DV EGRD L N G
Sbjct: 1045 LEGDDVLNGRAGDDLLSGGEGRDTLNGEDGDDTLLGGLGNDTLDGGAGNDTLDGGAGNDS 1104
Query: 434 GRNPDAFKALEY 445
Y
Sbjct: 1105 LEGGKGSDTYIY 1116
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/521 (10%), Positives = 117/521 (22%), Gaps = 47/521 (9%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + D G + + + ++
Sbjct: 69 GGLGDASLYGQAGNDILQGGAGADSLSGESGDDTLLGDSGNDYLYGGSGIDQL------- 121
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G ++ D+ ++ Y SD+ + +
Sbjct: 122 SGGEGADYLTGGEGNDTLLGDAGNDTLYGDSGNDQLDGGTGNDYLTAGDGSDVYRFSRGW 181
Query: 196 GAPKGSLGNNIYKIEV---QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G + ++ D I DL+ + I ++
Sbjct: 182 GQDSINNYDSSAGKTDAVEFAADILPADVIVTRSYTDLILSLKDSADRITISGYFQNDGD 241
Query: 253 IGGYEKNMTIAQHT--VIESVVG------SSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + A T +E + + GND + G ++++ G+DV G +G
Sbjct: 242 TPYTVEQIRFADGTHWNVEQIKSMAAFTFTDGNDALTGYASDDRIVGGMGDDVLSGLAGN 301
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D +Y + + D+L E IL
Sbjct: 302 D--VVNGDEGSDTLYGGTGQDTLSGGS--GSDYLYGEE------GNDLLAGNAGSDILYG 351
Query: 365 TASYEDLIQVIGQDVFESMKHFY--EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L G D + + F G+D ++ + D + + +A
Sbjct: 352 ADGNDILDGGTGNDTLDGGRGSDIYRFAKGYGQDSINNNSYGETATDKVDAIQLDGLNSA 411
Query: 423 ARHYITHGVKEGRNP-------------DAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ Y + ++
Sbjct: 412 DLRFYRSSDDLVIQIKATGDTLTVRSHFSQDGVTAYAVDQLRFADGSVWGGAQIKAAVVQ 471
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR----GAAARHYITHGVKEGRNPDAFK 525
S + + DS L D L G D A Y G
Sbjct: 472 PSEEADTLTGYPSADSLSGLDGNDSLSGRAGDDVLDGGNGADTLYGEDGNDTLLGRAGND 531
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+L + L + G D + +I+
Sbjct: 532 SLNGGYGDDVLDGGSGNDSLDGGYGSDTYVFRKGSGQDTIS 572
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 56/380 (14%), Positives = 98/380 (25%), Gaps = 26/380 (6%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ +++ DD L D +L G N I S+ G + T+ + +
Sbjct: 51 TTDGNDSVWGYATDDTLNGGLGDASLYGQAGNDILQGGAGADSLSGESGDDTLLGDSGND 110
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G SG D + G + GND G +G DT + S ++ +
Sbjct: 111 YLYGGSGIDQLSGGEGADYLTGGEGNDTLLGDAGNDTLY--GDSGNDQLDGGTGNDYLTA 168
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + RF+ S T + E ++ DV + +
Sbjct: 169 GD--------GSDVYRFSRGWGQDSINNYDSSAGKTDAVEFAADILPADVIVTRSYTDLI 220
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+ Y + D R A H+ +K + + +
Sbjct: 221 LSLKDSADRITISGYFQNDGDTPYTVEQIRFADGTHWNVEQIKSMAAFTFTDGNDALTGY 280
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
D V G +EG Y S +
Sbjct: 281 ASDDRIVGGMGDDVLSGLAGNDVVNGDEGSDT---------LYGGTGQDTLSGGSGSDYL 331
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
Y G L ++ L + G D + SI N
Sbjct: 332 YGEEGNDLLAGNAGSDILYGADGNDILDGGTGNDTLDGGRGSDIYRFAKGYGQDSI--NN 389
Query: 570 DLYLTSYDDLWNVFGSDRSA 589
+ Y + D + D
Sbjct: 390 NSYGETATDKVDAIQLDGLN 409
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 55/421 (13%), Positives = 106/421 (25%), Gaps = 15/421 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + + D G G T + +
Sbjct: 1255 GEDGNDTLLGGAGNDSLSGGIGNDVLDGGAGNDTLDGGKGSDTYVFGKGYGRDTISNYAY 1314
Query: 136 HPGSYNGGYPVYGVDNDYENDSF----LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+ + + + E+ S V+ +++ S Y I +
Sbjct: 1315 NDTTVDKLDVIRLEGLTSEDVSIRRESDDLVIQINQTGETLRVNSHFYADQSYGYAINQL 1374
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Q G ++ DS D + GG N I
Sbjct: 1375 QFANGI--------VWDQAQITAALLIGAESDDSITGYASDDRVSGGDGNDILSGRTGND 1426
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G T+ ++++G +GND + G N++ SGND DG G DT+ +
Sbjct: 1427 LLEGGRGKDTLNGEEGNDTLLGGAGNDTLNGGYGNDILDGGSGNDALDGGFGSDTYVFRR 1486
Query: 312 PSYLYKIYRFENAIIVYDANEH---KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ I + D + + SD+ R +D + + ++ +
Sbjct: 1487 GAGQDTISNYAYNDTTVDKLDVIHLEGLNASDILMRRESDDLVIQIKGTDETLRVTSHFS 1546
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+I G D + + + + Y
Sbjct: 1547 ASVIYGYGIDQVQFADGSILTNAQIKTALLTGTEVDESVVGYDSADRLLGLSGNDILYGR 1606
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G D L ++ L + G D + + S Y
Sbjct: 1607 QGDDFLDGGDGKDTLYGEDGNDTLQGGTGNDTLSGGYGNDLLDGGNGNDSLDGGYGSDTY 1666
Query: 489 L 489
+
Sbjct: 1667 V 1667
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 54/432 (12%), Positives = 104/432 (24%), Gaps = 81/432 (18%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ Y + + + G+D+++ G + ++ G
Sbjct: 271 TDGNDALTGYASDDRIVGGMGDDVLSGLAGNDVVN----GDEGSDTLYGGTGQDTLSGGS 326
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + + + G++G+D++ G N++ +GND DG G D + +
Sbjct: 327 GSDYLYGEEGNDLLAGNAGSDILYGADGNDILDGGTGNDTLDGGRGSDIYRFAKGYGQDS 386
Query: 318 IYRF-------------------------------------ENAIIVYDANEHKQD--FL 338
I + + QD
Sbjct: 387 INNNSYGETATDKVDAIQLDGLNSADLRFYRSSDDLVIQIKATGDTLTVRSHFSQDGVTA 446
Query: 339 SDVERLRFADQCI------------------DSVNVKQRSILEYTASYEDLIQVIGQDVF 380
V++LRFAD + L + L G DV
Sbjct: 447 YAVDQLRFADGSVWGGAQIKAAVVQPSEEADTLTGYPSADSLSGLDGNDSLSGRAGDDVL 506
Query: 381 ESMKHFYEFGLSEGRDITF--------------DSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ +G D D D L +GSD +
Sbjct: 507 DGGNGADTLYGEDGNDTLLGRAGNDSLNGGYGDDVLDGGSGNDSLDGGYGSDTYVFRKGS 566
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ G + + + E L + G F
Sbjct: 567 GQDTISNGVYNEGTVGKQDVIRLEGLNLSDISLRREYSDLIIQIKETGDTLRVSSHFSPS 626
Query: 487 LYLGSYDDLRNVFGSDRGAAARHY---ITHGVKEGRNPDAFKA---LEYIASHEDLINAF 540
+Y + F + G + + LE + ++ L
Sbjct: 627 STYYNYAIDQLQFADGTVWGVDQIKASLLTGGEFNDTLTGYDTDDILEGLVGNDTLSGGL 686
Query: 541 ADAPDLVQAGKD 552
+ AG+D
Sbjct: 687 GNDTLRGGAGRD 698
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 66/440 (15%), Positives = 116/440 (26%), Gaps = 79/440 (17%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRY--GIGKGTILSHNALHEIGHALG 133
T + +D + Y G G+ TI +++ H L
Sbjct: 1080 GGLGNDTLDGGAGNDTLDGGAGNDSLEGGKGSDTYIYRKGSGQDTISNYSYNDLTAHKLD 1139
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
++ N ++D + + + +D S+GY I +Q
Sbjct: 1140 VVRLEGLNTSDVSIRRESDDLLIQIRQTGETLRISSHFTVDQSYGYA-------INQLQF 1192
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G+L + + +I D L G V N I +
Sbjct: 1193 ----ADGTLWDEAQITAALLIGTESDDSITGYASGDKL----SGLVGNDILSGRGGDDVL 1244
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + T+ ++++G +GND + G N+V +GND DG G DT+ +
Sbjct: 1245 DGGDGKDTLNGEDGNDTLLGGAGNDSLSGGIGNDVLDGGAGNDTLDGGKGSDTYVFGKGY 1304
Query: 314 YLYKIYRFENAIIVYDANE---------------------------------------HK 334
I + D +
Sbjct: 1305 GRDTISNYAYNDTTVDKLDVIRLEGLTSEDVSIRRESDDLVIQINQTGETLRVNSHFYAD 1364
Query: 335 QDFLSDVERLRFADQ------------------CIDSVNVKQRSILEYTASYEDLIQVIG 376
Q + + +L+FA+ + + L G
Sbjct: 1365 QSYGYAINQLQFANGIVWDQAQITAALLIGAESDDSITGYASDDRVSGGDGNDILSGRTG 1424
Query: 377 QDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
D+ E + EG D D+ D L G+D T+
Sbjct: 1425 NDLLEGGRGKDTLNGEEGNDTLLGGAGNDTLNGGYGNDILDGGSGNDALDGGFGSDTYVF 1484
Query: 432 KEGRNPDAFKALEYIASHED 451
+ G D Y + D
Sbjct: 1485 RRGAGQDTISNYAYNDTTVD 1504
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 53/455 (11%), Positives = 113/455 (24%), Gaps = 97/455 (21%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + + D G G T + + + G+
Sbjct: 516 YGEDGNDTLLGRAGNDSLNGGYGDDVLDGGSGNDSLDGGYGSDTYVFRKGSGQDTISNGV 575
Query: 135 MHPGSYNGGYPVYGVDNDYENDSF-----LTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
+ G+ + + + S + + + F +T I
Sbjct: 576 YNEGTVGKQDVIRLEGLNLSDISLRREYSDLIIQIKETGDTLRVSSHFSPSSTYYNYAID 635
Query: 190 AVQKIYGAPKGSLGNNIYKIE----VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+Q ++ ++ F T+ DD+L+ +
Sbjct: 636 QLQF--------ADGTVWGVDQIKASLLTGGEFNDTLTGYDTDDILEGLV---------- 677
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++ G N T+ +++ G G D ++G + N+ +G+DV DG +G D
Sbjct: 678 ---GNDTLSGGLGNDTLRGGAGRDTLYGDDGADTLLGGADNDSLAGGNGDDVLDGGTGND 734
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS-------------------------- 339
T S Y + + + +++ +
Sbjct: 735 TLEGGKGSDTYIFAKGAGSDAIDNSSYNDITANKLDVVRLDGLNSEDVSLRRESDDLIVQ 794
Query: 340 -----------------------DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+++L+FAD I ++L+ T + +
Sbjct: 795 VRQTGESLRIRSHFASDSGSWSYAIDQLKFADGTIWDRAHITAALLDGTDGNDTITGYDT 854
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + G D+ G D N D
Sbjct: 855 ADTLSGLAGNDTLNGRNGNDLL-----DGGDGKDSLNGEAGDDFLL-------------G 896
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
L ++ L + +G D +
Sbjct: 897 GAGNDTLSGGEGNDTLDGGTGNDSLEGGIGSDTYI 931
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/260 (16%), Positives = 77/260 (29%), Gaps = 11/260 (4%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT----ILSHNALHEIGH 130
D K + + + D G G + I S + G
Sbjct: 877 DGGDGKDSLNGEAGDDFLLGGAGNDTLSGGEGNDTLDGGTGNDSLEGGIGSDTYIFRKGS 936
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+++ +YN P E + +S D ++ T VS A
Sbjct: 937 GQDIVYNYAYNESTPNKLDVVRLEGLTAED--VSIRRESDDLVIQIRQTGETLRVSSHFA 994
Query: 191 VQKIYGAPKG---SLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLN 246
V + YG ++ DS G D + ++
Sbjct: 995 VDQTYGYAINQLQFADGTVWDQAKITSALLIGTEGSDSIIGYATADELAGLEGDDVLNGR 1054
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ G E T+ ++++G GND + G + N+ +GND +G G DT
Sbjct: 1055 AG-DDLLSGGEGRDTLNGEDGDDTLLGGLGNDTLDGGAGNDTLDGGAGNDSLEGGKGSDT 1113
Query: 307 FFYYAPSYLYKIYRFENAII 326
+ Y S I + +
Sbjct: 1114 YIYRKGSGQDTISNYSYNDL 1133
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/258 (17%), Positives = 75/258 (29%), Gaps = 12/258 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ T + D G G T + G
Sbjct: 1439 GEEGNDTLLGGAGNDTLNGGYGNDILDGGSGNDALDGGFGSDTYVFRRGA-------GQD 1491
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD--IVAVQK 193
+Y + + S + D ++ G T V+ +V
Sbjct: 1492 TISNYAYNDTTVDKLDVIHLEGLNASDILMRRESDDLVIQIKGTDETLRVTSHFSASVIY 1551
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWS 251
YG + + Q K + T D G D D L+G N I +
Sbjct: 1552 GYGIDQVQFADGSILTNAQIKTALLTGTEVDESVVGYDSAD-RLLGLSGNDILYGRQGDD 1610
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G + T+ +++ G +GND + G N++ +GND DG G DT+ +
Sbjct: 1611 FLDGGDGKDTLYGEDGNDTLQGGTGNDTLSGGYGNDLLDGGNGNDSLDGGYGSDTYVFRK 1670
Query: 312 PSYLYKIYRFENAIIVYD 329
S I + D
Sbjct: 1671 GSGQDIISNYAYNDTTVD 1688
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 51/345 (14%), Positives = 88/345 (25%), Gaps = 36/345 (10%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV-------VGSSGNDVV 280
DDL+ G ++ + + S G + A V + +G+ +D +
Sbjct: 1342 DDLVIQINQTGETLRVNSHFYADQSYGYAINQLQFANGIVWDQAQITAALLIGAESDDSI 1401
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
G ++++ GND+ G +G D + E + D L+
Sbjct: 1402 TGYASDDRVSGGDGNDILSGRTGND--LLEGGRGKDTLNGEEGNDTLLGG--AGNDTLNG 1457
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDIT 398
IL+ + + L G D F D T
Sbjct: 1458 ---------------GYGNDILDGGSGNDALDGGFGSDTYVFRRGAGQDTISNYAYNDTT 1502
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
D + + R + G E + + I + FAD
Sbjct: 1503 VDKLDVIHLEGLNASDILMRRESDDLVIQIKGTDETLRVTSHFSASVIYGYGIDQVQFAD 1562
Query: 459 APDLVQVGKDHFSNFGCE-EGRFVTFDSYLYLGS-------YDDLRNVFGSDRGAAARHY 510
L G E + V +DS L Y + F Y
Sbjct: 1563 GSILTNAQIKTALLTGTEVDESVVGYDSADRLLGLSGNDILYGRQGDDFLDGGDGKDTLY 1622
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G + L ++ L + G D +
Sbjct: 1623 GEDGNDTLQGGTGNDTLSGGYGNDLLDGGNGNDSLDGGYGSDTYV 1667
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 56/516 (10%), Positives = 111/516 (21%), Gaps = 55/516 (10%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+D + +D D+ +G T+ + G
Sbjct: 640 ADGTVWGVDQIKASLLTGGEFNDTLTGYDTDDILEGLVGNDTLSGGLGNDTLRGGAGRDT 699
Query: 137 PGSYNGGYPVYGV-DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+G + G DND V+ D++
Sbjct: 700 LYGDDGADTLLGGADNDSLAGGNGDDVLDGGTGNDTLEGGKGSDTYIFAKG--------- 750
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI-DLNTESWS-SI 253
G++ + + G + D++L + I + S I
Sbjct: 751 ------AGSDAIDNSSYNDITANKLDVVRLDGLNSEDVSLRRESDDLIVQVRQTGESLRI 804
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ + + + I+ + + G + + + GND G DT +
Sbjct: 805 RSHFASDSGSWSYAIDQLKFADGTIWDRAHITAALLDGTDGNDTITGYDTADTL--SGLA 862
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ ++ +D L+ + L + L
Sbjct: 863 GNDTLNGRNGNDLL--DGGDGKDSLNG------EAGDDFLLGGAGNDTLSGGEGNDTLDG 914
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN--------------VFGSDR 419
G D E + +G Y Y + +
Sbjct: 915 GTGNDSLEGGIGSDTYIFRKGSGQDI-VYNYAYNESTPNKLDVVRLEGLTAEDVSIRRES 973
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL---------VQVGKDHF 470
G + Y + L A D G D
Sbjct: 974 DDLVIQIRQTGETLRVSSHFAVDQTYGYAINQLQFADGTVWDQAKITSALLIGTEGSDSI 1033
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
+ + + G D G R G L+
Sbjct: 1034 IGYATADELAGLEGDDVLNGRAGDDLLSGGEGRDTLN---GEDGDDTLLGGLGNDTLDGG 1090
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
A ++ L + G D + +I+
Sbjct: 1091 AGNDTLDGGAGNDSLEGGKGSDTYIYRKGSGQDTIS 1126
Score = 45.5 bits (106), Expect = 0.026, Method: Composition-based stats.
Identities = 65/492 (13%), Positives = 116/492 (23%), Gaps = 42/492 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ D+ G G+ T+ + + LG G
Sbjct: 1035 GYATADELAGLEGDDVLNGRAGDDLLSGGEGRDTLNGEDGDDTLLGGLGNDTLDGGAGND 1094
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ G + + S +Y + S D Y + + + V ++ G +
Sbjct: 1095 TLDGGAGNDSLEGGKGSD-TYIYRKGSGQDTISNYSYNDLTAHKLDVVRLEGLNTSDVS- 1152
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
DDLL G I + S G + A
Sbjct: 1153 ------------------IRRESDDLLIQIRQTGETLRISSHFTVDQSYGYAINQLQFAD 1194
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T+ + ++ ++IG +++ + D G G D
Sbjct: 1195 GTLWDEAQITA--ALLIGTESDDSITGYASGDKLSGLVGNDIL----SGRGGDDVLDGGD 1248
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
E D L +L+ A + L G D + K
Sbjct: 1249 GKDTLNGEDGNDTLLG------GAGNDSLSGGIGNDVLDGGAGNDTLDGGKGSDTYVFGK 1302
Query: 385 HF--YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA--AARHYITHGVKEGRNPDAF 440
+ D T D + R + G N +
Sbjct: 1303 GYGRDTISNYAYNDTTVDKLDVIRLEGLTSEDVSIRRESDDLVIQINQTGETLRVNSHFY 1362
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF--VTFDSYLYLGSYDDLRNV 498
Y + L A D Q+ ++ + D D L
Sbjct: 1363 ADQSYGYAINQLQFANGIVWDQAQITAALLIGAESDDSITGYASDDRVSGGDGNDILSGR 1422
Query: 499 FGSDRGAAARHYITHGVKEGRN----PDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
G+D R T +EG + L ++ L + G D +
Sbjct: 1423 TGNDLLEGGRGKDTLNGEEGNDTLLGGAGNDTLNGGYGNDILDGGSGNDALDGGFGSDTY 1482
Query: 555 SNFGYEEGRSIT 566
+I+
Sbjct: 1483 VFRRGAGQDTIS 1494
Score = 40.2 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 36/321 (11%), Positives = 70/321 (21%), Gaps = 45/321 (14%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
++ + + D+ G GK T+ + G
Sbjct: 1394 GAESDDSITGYASDDRVSGGDGNDILSGRTGNDLLEGGRGKDTLNGEEGNDTLLGGAGND 1453
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + G + D +Y + + D Y D + V +
Sbjct: 1454 TLNGGYGNDILDGGSGNDALD-GGFGSDTYVFRRGAGQDTISNYAYNDTTVDKLDVIHLE 1512
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + G D + I +
Sbjct: 1513 GLNAS----------DILMRRESDDLVIQIKGTDETLRVTSHFSASVI----YGYGIDQV 1558
Query: 256 YEKNMTIAQHTVIESV--VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ +I + I++ G+ ++ V+G + + SGND+ G
Sbjct: 1559 QFADGSILTNAQIKTALLTGTEVDESVVGYDSADRLLGLSGNDILYG------------- 1605
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ E D L L + L
Sbjct: 1606 RQGDDFLDGGDGKDTLYGEDGNDTLQG---------------GTGNDTLSGGYGNDLLDG 1650
Query: 374 VIGQDVFESMKHFYEFGLSEG 394
G D + + +G
Sbjct: 1651 GNGNDSLDGGYGSDTYVFRKG 1671
>gi|260575932|ref|ZP_05843927.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
gi|259021858|gb|EEW25159.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
Length = 878
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 71/492 (14%), Positives = 132/492 (26%), Gaps = 17/492 (3%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ G T + + GT +A ++ A
Sbjct: 135 NVLSGGLGNDSLTGGGGADTLDGGTGTDTADYSLSLAAVNVNLTTGTGSGGDAAGDVLTA 194
Query: 132 L------GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
+ GL + + V + + S + + S + +
Sbjct: 195 IENLTGSGLADTLTGDTAANVLTGNAGNDWLSGGSGIDSLYGGDNDDTLLGGSGSDVLSG 254
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ G+ + + T ++ L+ TL G N +
Sbjct: 255 GAGIDTADYTGSTAAVNVSLASGTGTGGDAAGDTLTGIENLTGSALNDTLTGDAANNLLS 314
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
S+ G + N T+A T + + G +G D + G N+ +G D+ DG +G+D
Sbjct: 315 GGAGNDSLSGGDSNDTLAGGTGADLLSGGTGTDSLYGGDDNDTLLGGTGADLLDGGAGID 374
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T Y A S + A + D LS +E L + + +
Sbjct: 375 TADYTASSIAVNVNLGTGATS---GGDAAGDTLSGIENLIGSAFNDSLTGDAGANSISGG 431
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ LI G D + + + L + D A +
Sbjct: 432 TGNDSLIGGGGADTLDGGTGTDTVDYALS---LAGVNVNLTTGAGSGGDADGDLLTAIEN 488
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE-----GRF 480
I G+ + + + DL++ + L + G G
Sbjct: 489 LIGSGLADTLTGNTAANALTGGAGNDLLSGGSGNDSLYGGDDNDTLLGGSGSDVLSGGAG 548
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
+ Y S ++ GS G A G++ L A L
Sbjct: 549 IDTADYTGSTSAVNVSLTSGSGSGGDAAGDSLTGIENLTGTALNDTLTGSAGANILAGGA 608
Query: 541 ADAPDLVQAGKD 552
+ G D
Sbjct: 609 GNDNLSGGDGDD 620
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/329 (14%), Positives = 90/329 (27%), Gaps = 13/329 (3%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ +L G ++ + N ++ T + + G +GND + G N+
Sbjct: 8 TGNDSLRGTTSADTITGLAGNDTLNARDGNDSLLAGTGNDLLYGGTGNDSMYGGDDNDTL 67
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G+D+ G +G+DT Y A + + + D LS +E L +D
Sbjct: 68 EGGTGSDILSGDAGIDTASYAASTAAVSVNLTTGTGS---GGDAAGDTLSGIENLLGSDY 124
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG------RDITFDSYL 403
++L + L G D + S T
Sbjct: 125 NDTLTGDAGANVLSGGLGNDSLTGGGGADTLDGGTGTDTADYSLSLAAVNVNLTTGTGSG 184
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
+ D L + A +A S D + + L+
Sbjct: 185 GDAAGDVLTAIENLTGSGLADTLTGDTAANVLTGNAGNDWLSGGSGIDSLYGGDNDDTLL 244
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
+ G + Y + ++ G+ G A G++
Sbjct: 245 GGSGSDVLSGG----AGIDTADYTGSTAAVNVSLASGTGTGGDAAGDTLTGIENLTGSAL 300
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKD 552
L A++ L + D
Sbjct: 301 NDTLTGDAANNLLSGGAGNDSLSGGDSND 329
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/444 (11%), Positives = 101/444 (22%), Gaps = 50/444 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
S + + + + I AD G G T+ +L + L
Sbjct: 412 GSAFNDSLTGDAGANSISGGTGNDSLIGGGGADTLDGGTGTDTVDYALSLAGVNVNL--- 468
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G D ++ + S ++ + ++ +A G ++S +Y
Sbjct: 469 --TTGAGSGGDADGDLLTAIENLIGSGLADTLTGNTAANALTGGAGNDLLSGGSGNDSLY 526
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN---YIDLNTESWSS 252
G + G D D T N + ++
Sbjct: 527 GGDD----------NDTLLGGSGSDVLSGGAGIDTADYTGSTSAVNVSLTSGSGSGGDAA 576
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----- 307
+ + +++ GS+G +++ G + N+ G+D G +G DT
Sbjct: 577 GDSLTGIENLTGTALNDTLTGSAGANILAGGAGNDNLSGGDGDDTLVGGTGADTLSGGQG 636
Query: 308 -FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA------------------- 347
Y S + D L+ ++ + +
Sbjct: 637 MDYADYSGSATAVNINLGTWTVTGGDATGDVLTGIDGIFGSAFNDTIIGFNDQGLVGDVY 696
Query: 348 -------DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+L + ++ G DV G D
Sbjct: 697 TNVFYGGGGNDYIDGAGSDDVLYGGDDNDTMLGGAGNDVLSGDAGNDSLSGGTGNDTASG 756
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
D S L + L+
Sbjct: 757 GTGNDSISGDAGADVLSGGDGNDSLDGGADADTLSGDLGDDLLSGGTGDDVLLGGDGSDT 816
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFD 484
G D S + D
Sbjct: 817 LYGGDGNDTLSGGAGGDLLVGGPD 840
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 65/519 (12%), Positives = 121/519 (23%), Gaps = 58/519 (11%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ + T D+ + D G T+ + G +
Sbjct: 296 TGSALNDTLTGDAANNLLSGGAGNDSLSGGDSNDTLAGGTGADLLSGGTGTDSLYGGDDN 355
Query: 144 YPVYGVDNDYENDS---FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ G D T+ + ++ + D ++ +
Sbjct: 356 DTLLGGTGADLLDGGAGIDTADYTASSIAVNVNLGTGATSGGDAAGDTLSGIENLIGSAF 415
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID---------------- 244
+ ++ GG D LD +Y
Sbjct: 416 NDSLTGDAGANSISGGTGNDSLIGGGGADTLDGGTGTDTVDYALSLAGVNVNLTTGAGSG 475
Query: 245 --------------LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ + ++ G + + + G SGND + G N+
Sbjct: 476 GDADGDLLTAIENLIGSGLADTLTGNTAANALTGGAGNDLLSGGSGNDSLYGGDDNDTLL 535
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK------------QDFL 338
SG+DV G +G+DT Y + + + DA D L
Sbjct: 536 GGSGSDVLSGGAGIDTADYTGSTSAVNVSLTSGSGSGGDAAGDSLTGIENLTGTALNDTL 595
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH---FYEFGLSEGR 395
+ + L + L+ G D + G +
Sbjct: 596 TG------SAGANILAGGAGNDNLSGGDGDDTLVGGTGADTLSGGQGMDYADYSGSATAV 649
Query: 396 DITFDSYLYLG--SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
+I ++ G + D+ G+A I +G D + + Y D I
Sbjct: 650 NINLGTWTVTGGDATGDVLTGIDGIFGSAFNDTIIGFNDQGLVGDVYTNVFYGGGGNDYI 709
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
+ L + G L G +
Sbjct: 710 DGAGSDDVLYGGDDNDTMLGGAGNDVLSGDAGNDSLSGGTGNDTASGGTGNDSIS--GDA 767
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G D +L+ A + L D G D
Sbjct: 768 GADVLSGGDGNDSLDGGADADTLSGDLGDDLLSGGTGDD 806
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 28/259 (10%), Positives = 70/259 (27%), Gaps = 8/259 (3%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + ++ G D + AD G G + + LG
Sbjct: 596 TGSAGANILAGGAGNDNLSGGDGD-DTLVGGTGADTLSGGQGMDYADYSGSATAVNINLG 654
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS--DIVAV 191
+ V + +F +++ + + + D
Sbjct: 655 TWTVTGGDATGDVLTGIDGIFGSAFNDTIIGFNDQGLVGDVYTNVFYGGGGNDYIDGAGS 714
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLN 246
+ + ++ G+D + ++ G +
Sbjct: 715 DDVLYGGDDNDTMLGGAGNDVLSGDAGNDSLSGGTGNDTASGGTGNDSISGDAGADVLSG 774
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ S+ G T++ + + G +G+DV++G ++ + GND G +G D
Sbjct: 775 GDGNDSLDGGADADTLSGDLGDDLLSGGTGDDVLLGGDGSDTLYGGDGNDTLSGGAGGDL 834
Query: 307 FFYYAPSYLYKIYRFENAI 325
+ + +
Sbjct: 835 LVGGPDRTRSSLAQTTPST 853
>gi|332208022|ref|XP_003253094.1| PREDICTED: matrix metalloproteinase-20 [Nomascus leucogenys]
Length = 483
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 48/157 (30%), Gaps = 27/157 (17%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T ++ + AL WS L+F + +DI
Sbjct: 117 WKKNTLTYRISKYTPSMSPVEVDK-------AVEMALQAWSSAAPLSFVRINSGEADIMI 169
Query: 82 ISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
N + P + +FD A+ W G G L A H
Sbjct: 170 SFENGDHGDSYPFDGPRGTLAHAFAP--GEGLGGDTHFDNAEKWTMGT-NGFNLFTVAAH 226
Query: 127 EIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSV 162
E GHALGL H YP Y N Y V
Sbjct: 227 EFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKDDV 263
>gi|156707920|gb|ABU93235.1| recombinant pilin/cytotoxin fusion protein [synthetic construct]
Length = 410
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 34/87 (39%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
E + + + + G GND + G+ +++ SG+DV +G +G D + +
Sbjct: 189 NDIFHSGEGDDLLDGGAGDDRLFGGKGNDRLSGDEGDDLLDGGSGDDVLNGGAGNDVYIF 248
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQD 336
+Y + A+ + D
Sbjct: 249 RKGDGNDTLYDGTGNDKLAFADANISD 275
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
G + N + + G +G+D + G N+ G+D+ DG SG D
Sbjct: 180 NDVFKGSKFNDIFHSGEGDDLLDGGAGDDRLFGGKGNDRLSGDEGDDLLDGGSGDDVLNG 239
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
A + +Y + + +YD + ++L FAD I +
Sbjct: 240 GAGNDVYIFRKGDGNDTLYDG--------TGNDKLAFADANISDI 276
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 7/136 (5%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y + + + S +D+ + N I + E + G + +
Sbjct: 160 YGYQSTDNLKSV-EEVIGSQFNDVFKGSKF----NDIFHSGEGDDLLDGGAGDDRLFGGK 214
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G G+D++ G S ++V +GNDV+ G DT + + +
Sbjct: 215 GNDRLSGDEGDDLLDGGSGDDVLNGGAGNDVYIFRKGDGNDTLYDGTGNDKLAFADANIS 274
Query: 325 IIVYDANEHKQDFLSD 340
I+ + + +
Sbjct: 275 DIMIERTKEGIIVKRN 290
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 40/130 (30%), Gaps = 30/130 (23%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+E V+GS NDV G+ N++F G+D+ DG +G D F
Sbjct: 171 VEEVIGSQFNDVFKGSKFNDIFHSGEGDDLLDGGAGDDRLF------------------- 211
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI--QVIGQDVFESMKH 385
D LS E +L A + I + G D
Sbjct: 212 ---GGKGNDRLSGDE------GDDLLDGGSGDDVLNGGAGNDVYIFRKGDGNDTLYDGTG 262
Query: 386 FYEFGLSEGR 395
+ ++
Sbjct: 263 NDKLAFADAN 272
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 15/128 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
K S F + GDDLLD + G + N ++
Sbjct: 179 FNDVFKGSKFNDIFHSGEGDDLLD-------------GGAGDDRLFGGKGNDRLSGDEGD 225
Query: 269 ESVVGSSGNDVVIGNSANNV--FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G SG+DV+ G + N+V F + GND +G D + + + I
Sbjct: 226 DLLDGGSGDDVLNGGAGNDVYIFRKGDGNDTLYDGTGNDKLAFADANISDIMIERTKEGI 285
Query: 327 VYDANEHK 334
+ N+H
Sbjct: 286 IVKRNDHS 293
Score = 47.1 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 38/180 (21%), Gaps = 48/180 (26%)
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFY--YAPSYLYKIYRF----ENAIIV---------- 327
+ N+ F G DG G D FY + + V
Sbjct: 71 ALNDDIFVGQGKMNIDGGDGHDRVFYSKDGGFGNITVDGTSATEAGSYTVNRKVARGDIY 130
Query: 328 ---------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
D L VE + + K
Sbjct: 131 HEVVKRQETKVGKRTETIQYRDYELRKVGYGYQSTDNLKSVEEVIGSQFNDVFKGSKFND 190
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
I + L G D K EG D+ GS DD+ N +
Sbjct: 191 IFHSGEGDDLLDGGAGDDRLFGGKGNDRLSGDEGDDLL-----DGGSGDDVLNGGAGNDV 245
>gi|122891389|emb|CAM14162.1| novel protein similar to vertebrate matrix metallopeptidase 16
(membrane-inserted) (MMP16) [Danio rerio]
Length = 580
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 58/218 (26%), Gaps = 64/218 (29%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L Q W I Y +T N + R A W V L FE
Sbjct: 79 LTGQKWQREHISYSIKNVTPKVG-------NQETHDAIRRAFDVWQGVTPLRFEAVPFRD 131
Query: 78 --------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGI 114
DI I ++ + P + +FD + W G
Sbjct: 132 LDSGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGN 189
Query: 115 GK-------GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM 167
G L A+HE+GHALGL H + D
Sbjct: 190 PNHDGERTAGNDLFLVAVHELGHALGLEHSSDPTAIMAPFYQYMD--------------- 234
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
SF D+ +QKIYG P +
Sbjct: 235 ------TESFKLPH----DDLQGIQKIYGPPNKNPQPT 262
>gi|114763232|ref|ZP_01442656.1| hypothetical protein 1100011001311_R2601_04713 [Pelagibaca
bermudensis HTCC2601]
gi|114544030|gb|EAU47040.1| hypothetical protein R2601_04713 [Roseovarius sp. HTCC2601]
Length = 949
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 39/113 (34%), Gaps = 5/113 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
I+ GDD L D + GG I + I G +
Sbjct: 759 GGNDTIFGRGGADRIHGGAGDDKLVAGGGDDIVYGGGGEDIINGGDGNDRIFGGADRDRL 818
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+S+ G GNDV+ G+ N++ +G DV G G DTF +
Sbjct: 819 IGSVGDDSLYGGEGNDVLRGDDGNDLLVGGAGRDVMLGGDGADTFVFDLADNA 871
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 60/412 (14%), Positives = 123/412 (29%), Gaps = 44/412 (10%)
Query: 197 APKGSLGNNIYKIEVQ------QKDSPFIQTIYD-SGGDDLLDLTLIGGVKNYIDLNTES 249
L +++Y + D Q ++D GG D ++ + + IDL+ S
Sbjct: 487 GETDGLADDVYVYNDEFGTLYEGADLSDRQVLWDKDGGIDAINAAAVTSD-SLIDLSGAS 545
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES---------SGNDVFDG 300
S I G + + I IE+ G G+D ++G +N+ SGND DG
Sbjct: 546 ASEIAGVK--LKIGVPDSIENAFGGDGDDTLVGTDGDNLLSGGRGDDSLHYSSGNDTIDG 603
Query: 301 SSGLDTFFYYAPSYLYKIYRFEN-AIIVYDANEHKQDFLSDVERLRFADQCIDSVN---- 355
+G+DT A S + + ++ +E+ + +VE F D
Sbjct: 604 GAGVDTLRIAALSTEIEGAFADPYTFLMRQGDENALSHVKNVEFFAFQDVTYSVSQLIVI 663
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ + + ++++ + + + D
Sbjct: 664 YGESDVPVVVETPDEVVVEAPVEAVPEPDPVTAPEPEVPTEEAVEETPEEPVEDTPEAPV 723
Query: 416 GSDRGAAARH----YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ T G + R + + ++ + G D
Sbjct: 724 DDTPETGTEYDRTETGTVGDDQMRGHYGSDDMSGLGGNDTIFGRGGADRIHGGAGDDKLV 783
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
G ++ + + G + R G+DR +L
Sbjct: 784 AGGGDDIVYGGGGEDIINGGDGNDRIFGGADRDRLIGSVGD------------DSLYGGE 831
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVF 583
++ L + + AG+D G + + F+ + D+ F
Sbjct: 832 GNDVLRGDDGNDLLVGGAGRD--VMLGGDGADTFVFDLADNASM--DVIRDF 879
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/326 (12%), Positives = 78/326 (23%), Gaps = 19/326 (5%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ D ++ G G ++ + I G+ + G
Sbjct: 567 GGDGDDTLVGTDGDNLLSGGRGDDSLHYSSGNDTIDGGAGVDTLRIAALSTEIEG----A 622
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
D + + S + + + + + IYG + +
Sbjct: 623 FADPYTFLMRQGDENALSHVKNVEFFAFQDVTYSVSQLIVIYGESDV----PVVVETPDE 678
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE-SVV 272
+ + + E + T T + +
Sbjct: 679 VVVEAPVEAVPEPDPVTAPEPEVPTEEAVEETPEEPVEDTPEAPVDDTPETGTEYDRTET 738
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G+D + G+ ++ GND G G D + + K+ IVY
Sbjct: 739 GTVGDDQMRGHYGSDDMSGLGGNDTIFGRGGADRI--HGGAGDDKLVAGGGDDIVYGGGG 796
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ D R L + + L G DV
Sbjct: 797 ED--------IINGGDGNDRIFGGADRDRLIGSVGDDSLYGGEGNDVLRGDDGNDLLVGG 848
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSD 418
GRD+ DL + D
Sbjct: 849 AGRDVMLGGDGADTFVFDLADNASMD 874
>gi|260718957|ref|YP_003225098.1| hemolysin A [Escherichia coli O103:H2 str. 12009]
gi|157688248|gb|ABQ02441.1| enterohemolysin [Escherichia coli]
gi|257762468|dbj|BAI33964.1| hemolysin A [Escherichia coli O103:H2 str. 12009]
Length = 998
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 34/216 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYR 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKAINGVLSFNESND 889
Query: 370 D----LIQVIGQDVFESMKHFYE-FGLSEGRDITFD 400
+D + H E +GR+I D
Sbjct: 890 VNGITFKNWFAKDASGADNHLVEVITDKDGREIKVD 925
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 46/164 (28%), Gaps = 19/164 (11%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G I +E ++G +D G N++F + GND +G+ G D +
Sbjct: 685 FEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLY- 743
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + ++ + D LS D L+ +Y
Sbjct: 744 -GDDGDDYISGGQGDDQLFGGS--GNDKLSG------GDGNNYLTGGSGNDELQAHGAYN 794
Query: 370 DLIQVIGQDVFE---------SMKHFYEFGLSEGRDITFDSYLY 404
L G D + G DI Y
Sbjct: 795 ILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNY 838
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 56/197 (28%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKRVGNDLI 873
>gi|56681804|gb|AAW21438.1| leukotoxin A [Pasteurellaceae bacterium I48]
Length = 390
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 40/101 (39%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N I ++ + G + TI + + + G G+D++ G + ++ GND
Sbjct: 223 GTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGND 282
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G G D F + I E + ++ + +D
Sbjct: 283 LLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDL 323
Score = 45.2 bits (105), Expect = 0.037, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 47/212 (22%), Gaps = 48/212 (22%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIV------ 327
V ++ F SG DG G D Y +Y + V
Sbjct: 115 VATLGDGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVES 174
Query: 328 ------------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ A + +D L VE + K
Sbjct: 175 GKALHEVTSTHTALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSK 234
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ + G D K G D ++ G +DL +
Sbjct: 235 FNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKG 289
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
D H G + L + S+
Sbjct: 290 DDI--FVHRQGDGNDSITESEGNDKLSFSDSN 319
>gi|313904345|ref|ZP_07837723.1| lipolytic protein G-D-S-L family [Eubacterium cellulosolvens 6]
gi|313470895|gb|EFR66219.1| lipolytic protein G-D-S-L family [Eubacterium cellulosolvens 6]
Length = 425
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 69/194 (35%), Gaps = 23/194 (11%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGS 491
G F Y+ + +L F Q + F + G R + FD Y+
Sbjct: 234 GEFASVFDFDAYMKYNPELKAKFGMD---KQAAYEDFVDNGMTMRRRASEEFDVCSYMNE 290
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGR----------NPDAFKALEYIASHE-----DL 536
Y +LR + D R ++ G + GR + ++Y A + +
Sbjct: 291 YPELRRKYKGDVAEFYRDWMNEGKEAGRHGTGCDKMVDPLTEYNGVDYSAIYNYDYYVER 350
Query: 537 INAFAD-APDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQH 593
+ D + + F N+G EGR S F+ Y +DL F + + +H
Sbjct: 351 YSYIKDRYAGDDEGALEQFVNYGIREGRQASEEFDVRAYRAYNEDLREEFQGNFTQYVEH 410
Query: 594 YITHGMKEGRALGI 607
Y+ G+ E R I
Sbjct: 411 YLISGINEHRRTTI 424
Score = 38.6 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRG 420
Y Y + D +++ F +G+ EGR + FD Y +DLR F +
Sbjct: 346 YYVERYSYIKDRYAGDDEGALEQFVNYGIREGRQASEEFDVRAYRAYNEDLREEFQGNFT 405
Query: 421 AAARHYITHGVKEGRNPDAF 440
HY+ G+ E R
Sbjct: 406 QYVEHYLISGINEHRRTTIG 425
>gi|325980909|ref|YP_004293311.1| hypothetical protein NAL212_0192 [Nitrosomonas sp. AL212]
gi|325530428|gb|ADZ25149.1| hypothetical protein NAL212_0192 [Nitrosomonas sp. AL212]
Length = 361
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 68/222 (30%), Gaps = 8/222 (3%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G N + G ND + S AT +D+ V Y
Sbjct: 26 GDANIQHFWAGHSIISTNDITSNTYSFGTDLPGSATAGKAVLIATQGFADLGIVAPDYII 85
Query: 198 PKGSLGNNIYKIEVQQ-KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
P G L I G L+ GV + ++ G
Sbjct: 86 PDGFLFTTNGAINFPGMIGGTISYVALPVDGTTSLNRDGSTGVNS-----PTNFVGNTGT 140
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ I+ +++ G+ G D++ + GND +G G+DT Y Y
Sbjct: 141 IFSNVISGTNGADNLTGTPGADIINAGDGLDRLNGVGGNDTLEGGLGIDTAIYSGNRVGY 200
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
I + + + D LS +ERL+FAD +
Sbjct: 201 TIATTSSGFNI--SGSEGDDTLSGIERLQFADTKLAMDLNNG 240
>gi|239813783|ref|YP_002942693.1| glycosyl transferase family 2 [Variovorax paradoxus S110]
gi|239800360|gb|ACS17427.1| glycosyl transferase family 2 [Variovorax paradoxus S110]
Length = 1476
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 15/86 (17%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLWN 581
F Y+ ++ D+ +A P +H+ G EGR F+ Y Y D
Sbjct: 446 FDREWYLKTYPDVASA-GTDP------AEHYVTHGAAEGRQPGPWFSGTEYAARYGD--- 495
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGI 607
+ HY G +EGR G+
Sbjct: 496 ---AAGFNPLIHYTLVGAREGRRAGL 518
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 538
FD YL +Y D+ + A HY+THG EGR P F EY A + D
Sbjct: 443 SPYFDREWYLKTYPDVASAG----TDPAEHYVTHGAAEGRQPGPWFSGTEYAARYGD--- 495
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGR 563
A P + H++ G EGR
Sbjct: 496 AAGFNPLI------HYTLVGAREGR 514
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI--SGMQFKSVMNLSEK 621
S F+ + YL +Y D+ S + A+HY+THG EGR G SG ++ + +
Sbjct: 443 SPYFDREWYLKTYPDV----ASAGTDPAEHYVTHGAAEGRQPGPWFSGTEYAARYGDAAG 498
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 33/89 (37%), Gaps = 14/89 (15%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 454
FD YL +Y D+ + A HY+THG EGR P F EY A + D
Sbjct: 443 SPYFDREWYLKTYPDVASA----GTDPAEHYVTHGAAEGRQPGPWFSGTEYAARYGDAAG 498
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
H++ G EGR
Sbjct: 499 F---------NPLIHYTLVGAREGRRAGL 518
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 33/100 (33%), Gaps = 21/100 (21%)
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
L VE +RF+ Y +Y D+ G D +H+ G +EGR
Sbjct: 434 LGAVEIVRFS---------PYFDREWYLKTYPDVASA-GTDP---AEHYVTHGAAEGRQP 480
Query: 398 T--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
F Y Y D HY G +EGR
Sbjct: 481 GPWFSGTEYAARYGDAA------GFNPLIHYTLVGAREGR 514
>gi|254488611|ref|ZP_05101816.1| hypothetical protein RGAI101_3274 [Roseobacter sp. GAI101]
gi|214045480|gb|EEB86118.1| hypothetical protein RGAI101_3274 [Roseobacter sp. GAI101]
Length = 752
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/336 (13%), Positives = 89/336 (26%), Gaps = 46/336 (13%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG----GYEKNMTIAQHT 266
TI D + + D S + G N I
Sbjct: 230 TVTYTGAEAGTITDGANTITFSEIEHLVLTDQADTVDGSADTAGMYIEARGGNDDILGGF 289
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+S+ G GND + G + ++ +G+D+ G DT + + S + I + ++
Sbjct: 290 GNDSLRGEDGNDTLSGQAGDDSVAGGAGDDLIYTGYGADTVWGDSGSDRFVIDDGDGSVT 349
Query: 327 VYDANEHK---------------------------------QDFLSDVERLRFADQCIDS 353
+Y ++E ++E ++ D
Sbjct: 350 IYGSDEGGDTDTLDFNTGAATNGVTVTFGGWEFGAFNFDGTTGTFYEIEAVQGTDLADSL 409
Query: 354 VNVKQRSILE--YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
S L+ A + ++ +G D + G D D
Sbjct: 410 DASADMSGLDLSGAAGDDTILGGMGDDFIDGGTGDDSLKGGLGNDTITGD-----DGTDT 464
Query: 412 RNVFGSDRGAAARHY--ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ D + G + + A ++D+ AD D + + +
Sbjct: 465 FSYAAGDGTDTITDFNTGNTGTLNDGDSTNNDFINLSAFYDDIWELHADQADDGILNQSN 524
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
G + F S + S N +
Sbjct: 525 DGVGGADYSNNAHFGSGGLIFSGASADNSSFTSENT 560
>gi|45359865|ref|NP_004762.2| matrix metalloproteinase-20 preproprotein [Homo sapiens]
gi|322510116|sp|O60882|MMP20_HUMAN RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
Flags: Precursor
gi|157170228|gb|AAI52742.1| Matrix metallopeptidase 20 [synthetic construct]
gi|261857992|dbj|BAI45518.1| matrix metallopeptidase 20 [synthetic construct]
Length = 483
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 59/198 (29%), Gaps = 53/198 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T S ++ + AL WS V L+F + +DI
Sbjct: 117 WKKNTLTYRISKYTPSMSSVEVDK-------AVEMALQAWSSAVPLSFVRINSGEADIMI 169
Query: 82 ISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
N + P + +FD A+ W G G L A H
Sbjct: 170 SFENGDHGDSYPFDGPRGTLAHAFAP--GEGLGGDTHFDNAEKWTMGT-NGFNLFTVAAH 226
Query: 127 EIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
E GHALGL H YP Y N Y
Sbjct: 227 EFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKD------------------------- 261
Query: 186 SDIVAVQKIYGAPKGSLG 203
D+ +Q +YG K LG
Sbjct: 262 -DVKGIQALYGPRKVFLG 278
>gi|289676887|ref|ZP_06497777.1| putative hemolysin-type calcium-binding region [Pseudomonas
syringae pv. syringae FF5]
Length = 514
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 1/122 (0%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+S +D ++G+S N+V G D G G D + + +
Sbjct: 366 HIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTV 425
Query: 330 ANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ +++E L I+ ++++ AS L G D+
Sbjct: 426 VSSVSWTLGANLENLLLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTGGDGSDS 485
Query: 389 FG 390
+
Sbjct: 486 YY 487
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 47/141 (33%), Gaps = 10/141 (7%)
Query: 192 QKIYGAPKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTL-------IGGVKN 241
Q G G+ ++ + G+D+ + +
Sbjct: 361 QNEGGHIFGTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPS 420
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
+D S S G + + G++ +V+IGN++NN+ ++G D+ G
Sbjct: 421 QVDTVVSSVSWTLGANLENLLLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTGG 480
Query: 302 SGLDTFFYYAPSYLYKIYRFE 322
G D+++ + +
Sbjct: 481 DGSDSYYVDDAADRVVETNAD 501
Score = 39.0 bits (89), Expect = 2.8, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 31/118 (26%), Gaps = 2/118 (1%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
L ++ + L G D + + D +S D + +
Sbjct: 369 GTSDDDTLVGSSGNDVLDGDQGADDMSGGDGNDIYVVDNAFDTVTESNDSPSQVDTVVSS 428
Query: 415 FGSDRGAAARHYITHGVK--EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
GA + + GV G + AS+ L A G D +
Sbjct: 429 VSWTLGANLENLLLTGVSAINGTGNAVKNVIIGNASNNILDGAAGADMLTGGDGSDSY 486
>gi|332837591|ref|XP_003313324.1| PREDICTED: interstitial collagenase isoform 1 [Pan troglodytes]
Length = 403
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 54/185 (29%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 42 RWEQTHLTYRIENYTPDLPRADVD-------HAIAKAFQLWSNVTPLTFTKVSEGQADIM 94
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 95 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLYRVAA 151
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 152 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIG---PQT 208
Query: 183 PMVSD 187
P V D
Sbjct: 209 PKVCD 213
>gi|254445405|ref|ZP_05058881.1| Putative Ig domain family [Verrucomicrobiae bacterium DG1235]
gi|198259713|gb|EDY84021.1| Putative Ig domain family [Verrucomicrobiae bacterium DG1235]
Length = 6102
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 61/180 (33%), Gaps = 13/180 (7%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI---IVYD 329
G S ++V + ++ + +G+D DG G D Y Y + +
Sbjct: 5845 GISLDNVQLVDAYEDSITGGAGDDTIDGGVGDDIAIYSGARNEYTVIDNSDGTYSVTDSV 5904
Query: 330 ANEHKQDFLSDVERLRFADQC---IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D ++++E L+F+DQ +++ Q + + T S E + G D +
Sbjct: 5905 GGRDGTDTITNIENLQFSDQTQTLSEALTFDQDTTIVGTGSNETIDTGAGNDNVTAGGGT 5964
Query: 387 YEFGLSEGRDITF-------DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
G D+ + + G DD ++ + VK N D
Sbjct: 5965 DIIDTGMGDDVVTIGTNTSASTTIDFGDGDDTLDLNLGGYTLDFTNISNAMVKNLENIDI 6024
>gi|297690067|ref|XP_002822447.1| PREDICTED: interstitial collagenase-like isoform 2 [Pongo abelii]
Length = 403
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 54/185 (29%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 42 RWEQTHLTYRIENYTPDLPRADVD-------HAIEKAFQLWSNVTPLTFTKVSEGQADIM 94
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 95 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLYRVAA 151
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 152 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGPSQNPVQPIG---PQT 208
Query: 183 PMVSD 187
P V D
Sbjct: 209 PKVCD 213
>gi|209525687|ref|ZP_03274224.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209493856|gb|EDZ94174.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 303
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 62/193 (32%), Gaps = 24/193 (12%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G + + + S T+ DS G+ T+ G + + S+ G
Sbjct: 42 GDNLGNGTSDFGETLSSNGSVNEITVTDSAGE-----TVRGTGAADRIIGGDGPDSLLGG 96
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N TI ++++G +GND++ GN ++ + +GND G DT + A L
Sbjct: 97 SNNDTIYGKAGSDTLLGEAGNDLLFGNQGRDLLYGGNGNDTLYGGQEADTLYGEAGDDLL 156
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
F N + D L K IL + L G
Sbjct: 157 ----FGNLANDWLYGGDGNDTL---------------FGGKNDDILYGGDGNDLLSGDTG 197
Query: 377 QDVFESMKHFYEF 389
D + F
Sbjct: 198 ADTLIGGEGRDSF 210
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
T+ G+DLL L GG N + ++ G + +
Sbjct: 97 SNNDTIYGKAGSDTLLGEAGNDLLFGNQGRDLLYGGNGNDTLYGGQEADTLYGEAGDDLL 156
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + + G GND + G +++ + GND+ G +G DT + +
Sbjct: 157 FGNLANDWLYGGDGNDTLFGGKNDDILYGGDGNDLLSGDTGADTLIGGEGRDSFVVSSLS 216
Query: 323 NAIIVYDA 330
+ + +A
Sbjct: 217 GGVNIREA 224
Score = 44.4 bits (103), Expect = 0.067, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 38/156 (24%)
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N I V D+ +R+ D + + A + L+ G D+
Sbjct: 63 NEITVTDSAGETVRGTGAADRIIGGDGPDSLLGGSNNDTIYGKAGSDTLLGEAGNDLLFG 122
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+ G D + Y + + A Y G
Sbjct: 123 NQGRDLLYGGNGNDTLYGGQEADTLYGEAGDDLLFGNLANDWLYGGDGNDTLFGGKNDDI 182
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
L ++ L + G+D F G
Sbjct: 183 LYGGDGNDLLSGDTGADTLIGGEGRDSFVVSSLSGG 218
>gi|254438536|ref|ZP_05052030.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
gi|198253982|gb|EDY78296.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
Length = 951
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/457 (10%), Positives = 96/457 (21%), Gaps = 31/457 (6%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ I+ N+G + D + I A
Sbjct: 63 NVTDSGTDDIITGNSGD-NIITVTGGADVVDGGAGDDWLVLDYSGSAVTVSATTTSISFA 121
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD---- 187
PG+ T ++ + T D
Sbjct: 122 ---GSPGTVTIAPNSIEHFLVLTGGGTDTITLTTADGDNYFDTGEGASTVTVGSGDNVFV 178
Query: 188 ----IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
I + G +LG TI S G D + L G + +
Sbjct: 179 GGSGIDTLTFGNGDNSINLGYGTNGAN-TLTGGSGNNTILGSDGIDTVTL-GGGNNRIEV 236
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN---------------NV 288
+ S G + N I + I+++ GN+ + N
Sbjct: 237 GDGANTLSIGGTFNGNNVIIGGSGIDTITVGGGNNCIDAGWGTAGANTITSSATGTGTNS 296
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR-FA 347
G D +G D++ ++ I D + +
Sbjct: 297 ILGGEGIDTITLGNG-DSYIAAGGGDNTITTGTGDSFITADNGIDTITAMGGDNVIEAGT 355
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
++E + + + G D+ + + + G D +
Sbjct: 356 GGINTVTTGIGNDVVETGNAADIITTGAGNDIIKDLGGGGTLTGAAGHDRIIMDFSASSG 415
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
V + + ++ E + + I +
Sbjct: 416 GVTTTAVNVAGTYSGLVGGTSYTGIEEFHITGSGGGDIITTGAGADVLDGGHGADTLTAG 475
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
G + G D L D
Sbjct: 476 GGSDVIYGTVGDVIAGGEDAGGGDNDVLVLNGLGDGT 512
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 31/307 (10%), Positives = 70/307 (22%), Gaps = 48/307 (15%)
Query: 243 IDLNTESWSSIGGYEKN--MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD- 299
IDL + + + + + + + G+SG++++ +V +G+D
Sbjct: 43 IDLTIGAGVTGLTLDGEAPINVTDSGTDDIITGNSGDNIITVTGGADVVDGGAGDDWLVL 102
Query: 300 --------------------------------------GSSGLDTFFYYAPSYLYKIYRF 321
G DT
Sbjct: 103 DYSGSAVTVSATTTSISFAGSPGTVTIAPNSIEHFLVLTGGGTDTITLTTADGDNYFDTG 162
Query: 322 ENAIIVYDANEHKQDF-LSDVERLRFADQCIDS---VNVKQRSILEYTASYEDLIQVIGQ 377
E A V + S ++ L F + + L + ++ G
Sbjct: 163 EGASTVTVGSGDNVFVGGSGIDTLTFGNGDNSINLGYGTNGANTLTGGSGNNTILGSDGI 222
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL-RNVFGSDRGAAARHYITHGVKEGRN 436
D + +G + + G+ + + + + I G
Sbjct: 223 DTVTLGGGNNRIEVGDGANTLSIGGTFNGNNVIIGGSGIDTITVGGGNNCIDAGWGTAGA 282
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD-DL 495
+ ++ L + G + + G + D
Sbjct: 283 NTITSSATGTGTNSIL-GGEGIDTITLGNGDSYIAAGGGDNTITTGTGDSFITADNGIDT 341
Query: 496 RNVFGSD 502
G D
Sbjct: 342 ITAMGGD 348
>gi|126728313|ref|ZP_01744129.1| hypothetical protein SSE37_20022 [Sagittula stellata E-37]
gi|126711278|gb|EBA10328.1| hypothetical protein SSE37_20022 [Sagittula stellata E-37]
Length = 364
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/280 (16%), Positives = 81/280 (28%), Gaps = 21/280 (7%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
TI GDD+L GG+ + + + G E N TI
Sbjct: 23 GNDTYHGLEGNDTIDGEAGDDVL----WGGLDDDWLKGGIGYDLLLGGEGNDTIEGGLDN 78
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRF 321
+++ G +GND+++G ++ GND DG SG DT + +
Sbjct: 79 DTMDGEAGNDLMLGGEGDDWMKGEDGNDTMDGESGNDTVEGGLGDDWMKGEQGRDLMLGG 138
Query: 322 ENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
E + + D + + + + ++ + + + +G D
Sbjct: 139 EGNDTIEGGLDDDTMDGEAGNDLMLGGEGDDWMKGEDGNDTMDGESGNDTVEGGLGDDWM 198
Query: 381 ESMKHFYEFGLSEGRDI-----TFDSYLYLGSYDDLRNVFGSDRGAAARHY----ITHGV 431
+ + EG D D+ D + G D G
Sbjct: 199 KGEQGRDLMLGGEGNDTIEGGLDDDTMDGEAGNDLMLGGEGDDWMKGEDGNDTMDGESGN 258
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
L+ ++ L D + G D F
Sbjct: 259 DLIEGGAGADWLKGEGGNDTLFGGAGDDLLVGGDGADVFV 298
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/258 (16%), Positives = 81/258 (31%), Gaps = 17/258 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ T ++ + + + D + G T+ + + LG
Sbjct: 65 GGEGNDTIEGGLDNDTMDGEAGNDLMLGGEGDDWMKGEDGNDTMDGESGNDTVEGGLGDD 124
Query: 136 HP-GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + G ND M D M+ D + +
Sbjct: 125 WMKGEQGRDLMLGGEGNDTIEGGLDDDTMDGEAGNDLMLGGEG--------DDWMKGEDG 176
Query: 195 YGAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLN 246
G GN+ + + K + G+D + D T+ G N + L
Sbjct: 177 NDTMDGESGNDTVEGGLGDDWMKGEQGRDLMLGGEGNDTIEGGLDDDTMDGEAGNDLMLG 236
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
E + G + N T+ + + + G +G D + G N+ F +G+D+ G G D
Sbjct: 237 GEGDDWMKGEDGNDTMDGESGNDLIEGGAGADWLKGEGGNDTLFGGAGDDLLVGGDGADV 296
Query: 307 FFYYAPSYLYKIYRFENA 324
F + S + F++
Sbjct: 297 FVFAQESGFDIVADFQDG 314
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 68/258 (26%), Gaps = 12/258 (4%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
D L G E + G E N TI + + G +D + G ++
Sbjct: 4 TRDDNLFGTDMADFIALLEGNDTYHGLEGNDTIDGEAGDDVLWGGLDDDWLKGGIGYDLL 63
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFAD 348
GND +G DT + + E + + + D S + +
Sbjct: 64 LGGEGNDTIEGGLDNDTM--DGEAGNDLMLGGEGDDWMKGEDGNDTMDGESGNDTVEGGL 121
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD-----ITFDSYL 403
+ R ++ + + + D + EG D D+
Sbjct: 122 GDDWMKGEQGRDLMLGGEGNDTIEGGLDDDTMDGEAGNDLMLGGEGDDWMKGEDGNDTMD 181
Query: 404 YLGSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
D + G D + G ++ A ++ ++ D
Sbjct: 182 GESGNDTVEGGLGDDWMKGEQGRDLMLGGEGNDTIEGGLDDDTMDGEAGNDLMLGGEGDD 241
Query: 460 PDLVQVGKDHFSNFGCEE 477
+ G D +
Sbjct: 242 WMKGEDGNDTMDGESGND 259
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 41/318 (12%), Positives = 81/318 (25%), Gaps = 24/318 (7%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G + IA ++ G GND + G + ++V + +D G G D
Sbjct: 6 DDNLFGTDMADFIALLEGNDTYHGLEGNDTIDGEAGDDVLWGGLDDDWLKGGIGYDLLLG 65
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + E D + E ++ + +
Sbjct: 66 GEGNDTIE----GGLDNDTMDGEAGNDLMLGGE------GDDWMKGEDGNDTMDGESGND 115
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ +G D + + EG D G DD + +
Sbjct: 116 TVEGGLGDDWMKGEQGRDLMLGGEGNDTIEG-----GLDDDTMDGEAGNDLML----GGE 166
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G + D ++ + ++ + D + G+D + D
Sbjct: 167 GDDWMKGEDGNDTMDGESGNDTVEGGLGDDWMKGEQGRDLMLGGEGNDTIEGGLDDDTMD 226
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
G + + G G +E A + L + A
Sbjct: 227 GEAGNDLMLGGEGDDWMK---GEDGNDTMDGESGNDLIEGGAGADWLKGEGGNDTLFGGA 283
Query: 550 GKDHFSNFGYEEGRSITF 567
G D G + F
Sbjct: 284 GDD--LLVGGDGADVFVF 299
>gi|296535884|ref|ZP_06898041.1| hemolysin-type calcium-binding region [Roseomonas cervicalis ATCC
49957]
gi|296263791|gb|EFH10259.1| hemolysin-type calcium-binding region [Roseomonas cervicalis ATCC
49957]
Length = 340
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 54/139 (38%), Gaps = 22/139 (15%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FDS YL + D+ + HY G EGRNP+A F Y D+ A
Sbjct: 8 FDSAYYLATNGDVAASGWA--TDPGGHYERFGRYEGRNPNAYFDEGFYRRFQLDVAEAIG 65
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSI---------TF-------NPDLYLTSYDDLWNVFGS 585
D +G DH+ +G E RS F N Y + D+ + +
Sbjct: 66 D--GRFASGYDHWIGYGQFEERSPRQVYGTQNTYFPSELGFTNAGGYFAANADVLDAYLR 123
Query: 586 DR-SAAAQHYITHGMKEGR 603
+A QHY+ +G EGR
Sbjct: 124 GEVRSAWQHYVEYGHDEGR 142
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 51/140 (36%), Gaps = 22/140 (15%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FDS YL + D+ HY G EGRNP+A F Y D+ A
Sbjct: 8 FDSAYYLATNGDVAAS--GWATDPGGHYERFGRYEGRNPNAYFDEGFYRRFQLDVAEAIG 65
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT----------------FDSYLYLGSYDDLRNVFGS 501
D G DH+ +G E R ++ Y + D+ + +
Sbjct: 66 DG--RFASGYDHWIGYGQFEERSPRQVYGTQNTYFPSELGFTNAGGYFAANADVLDAYLR 123
Query: 502 DRG-AAARHYITHGVKEGRN 520
+A +HY+ +G EGR
Sbjct: 124 GEVRSAWQHYVEYGHDEGRQ 143
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDD 578
D F + Y+A++ D+ + H+ FG EGR+ F+ Y D
Sbjct: 5 LDFFDSAYYLATNGDVAAS-----GWATDPGGHYERFGRYEGRNPNAYFDEGFYRRFQLD 59
Query: 579 LWNVFGSDRSA-AAQHYITHGMKEGRA 604
+ G R A H+I +G E R+
Sbjct: 60 VAEAIGDGRFASGYDHWIGYGQFEERS 86
>gi|61368093|gb|AAX43101.1| matrix metalloproteinase 1 [synthetic construct]
Length = 470
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 53/185 (28%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 108 RWEQTHLTYRIENYTPDLPRADVD-------HAIEKAFQLWSNVTPLTFTKVSEGQADIM 160
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 161 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLHRVAA 217
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 218 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIG---PPT 274
Query: 183 PMVSD 187
P D
Sbjct: 275 PKACD 279
>gi|302130943|ref|ZP_07256933.1| mannuronan C-5-epimerase, putative [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 1610
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/409 (13%), Positives = 108/409 (26%), Gaps = 27/409 (6%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL +S + ++ G+S +D +IG++ N++ G D G G
Sbjct: 1201 DLGFRGNASDNNDPAAIFAGGQNEGGNIFGTSDDDTLIGSAGNDILDGDQGADQMTGGDG 1260
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L ID ++++
Sbjct: 1261 NDIYVVDNALDTVTESNDSPSQVDTVVSSVSWTLGANVENLLLTGVSAIDGTGNALKNVI 1320
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+S + G D+ + + + + + + D +A
Sbjct: 1321 TGNSSNNVVDGGAGGDLLKGGDGSDSYY------VDDVADRVVETNSDAWVGGVDTVYSA 1374
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRF 480
Y E + D L D + G D S G
Sbjct: 1375 LASYTLGAHLENIAITRTDTANATGNALDNVLYAGAGDNVMDGRDGNDTASYLFASAGVT 1434
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF---KALEYIASHEDLI 537
V ++ + GS G + + L A ++ L
Sbjct: 1435 VALNTSA-------QQATGGSGLDTLKGTENLTGSQFADSLTGNKNANVLNGGAGNDTLS 1487
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
D + +G D + G FN D + +
Sbjct: 1488 GGAGDDVLIGSSGAD--TLIGGTGADRYVFNSID--EVGRDGLRDIINGFKVGEGDKLDF 1543
Query: 598 GMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ R L + F + N + + + +L LY + +
Sbjct: 1544 TGFDARPLTDTHDAFTFIGNSAFSANNTGELRF----ADGVLYGNVDDN 1588
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 69/518 (13%), Positives = 143/518 (27%), Gaps = 27/518 (5%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADV---WRYGIGKGTILSHNALHEI 128
E + + N T + + + + +F G +++ A HE+
Sbjct: 342 ERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVLGTEANDVITGGAAHEL 401
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD- 187
L G + + S ++ Q + + AT +++D
Sbjct: 402 IFGLAGKDTLDGGTGDDILVGGAGADKLSGGAGADTFRFDQLTDSYRTATTSATDLLTDF 461
Query: 188 -------IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+A G G G + D+ G+ +L L G +K
Sbjct: 462 NVSQDRIDLANLGFTGLGSGKNGTLNISYNATLDRTYVKSLDVDASGN-RFELGLTGNLK 520
Query: 241 NYIDLNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ ++ + + + G T+ + + G++G D + G + + + D
Sbjct: 521 DTLNASHFIFQRVTEGTAGGDTLTGTAGNDVINGNAGVDRIDGGAGADTINGGADADTLT 580
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENA----IIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
G +G D F Y + Y+ Y I + LS + D +++
Sbjct: 581 GGAGADVFVYSSRLDSYRNYTAGGPKQSDTIFDFNVAEDRIDLSAIGLRGLGDGSANTLY 640
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ T + + G +++ L F S L
Sbjct: 641 LSLNGDGSKTYVKTNAVDTTGNRFEIALEGNLLDKLGASN-FIFSSASATNQAPVLNTPL 699
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA----DAPDLVQVGKDHFS 471
+ + + AL Y A+ D D+ L G +
Sbjct: 700 MDQIVTELKPFSYTVQPGSFSDPDSTALTYSATLADNSALPDWLKFDSKTLTFSGTPGGT 759
Query: 472 NFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
G D+ + NV G T + + L +
Sbjct: 760 ASGLYSVLLTASDATGASVADSFAINVGNVAPGIIT---GTESAEALYGTEGNDTLLGLG 816
Query: 532 SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
+ L AG+D + +G + + ++
Sbjct: 817 GDDTLRGDTGADVLNGGAGRD--ALYGGADADTFVYST 852
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 46/292 (15%), Positives = 91/292 (31%), Gaps = 16/292 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + + ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDAFPLVTVLG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I E + G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TEANDVITGGAAHELIFGLAGKDTLDGGTGDDILVGGAGADKLSGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ ++ D + L+++ ++N+ + L+ T +
Sbjct: 447 YRTATTSATDLLTDFNVSQDRIDLANLGFTGLGSGKNGTLNISYNATLDRTYVKSLDVDA 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ I D L G+D GV
Sbjct: 507 SGNRFELGLTGNLKDTLNASHFIFQRVTEGTAGGDTLTGTAGNDVIN-----GNAGVDRI 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF--GCEEGRFVTFD 484
+ A + L + D + N+ G + FD
Sbjct: 562 DGGAGADTINGGADADTLTGGAGADVFVYSSRLDSYRNYTAGGPKQSDTIFD 613
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 49/149 (32%), Gaps = 5/149 (3%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ D A+ S + K + + SG +L
Sbjct: 716 PGSFSDPDSTALTYSATLADNSALPDWLKFDSKTLTFSGTPGGTASGLYSVLLTASDATG 775
Query: 240 KNY-----IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ I++ + I G E + ++++G G+D + G++ +V +G
Sbjct: 776 ASVADSFAINVGNVAPGIITGTESAEALYGTEGNDTLLGLGGDDTLRGDTGADVLNGGAG 835
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
D G + DTF Y + Y+ Y
Sbjct: 836 RDALYGGADADTFVYSTLTDSYRDYDASG 864
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 59/177 (33%), Gaps = 17/177 (9%)
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
D+ Y +D V + +D + A+ + + I + N
Sbjct: 1344 SDSYYVDDVADRVVETNSDAWVGGVDTVYSALASYTLGAHLENIAITRTDTANATGNA-- 1401
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN--------- 259
++ + G+D L + LNT + + GG +
Sbjct: 1402 LDNVLYAGAGDNVMDGRDGNDTASY-LFASAGVTVALNTSAQQATGGSGLDTLKGTENLT 1460
Query: 260 -----MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ + + G +GND + G + ++V SSG D G +G D + + +
Sbjct: 1461 GSQFADSLTGNKNANVLNGGAGNDTLSGGAGDDVLIGSSGADTLIGGTGADRYVFNS 1517
Score = 39.0 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 58/438 (13%), Positives = 112/438 (25%), Gaps = 15/438 (3%)
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
H GL + V+ + Y ND +V++ + ++G +T +V
Sbjct: 168 HGNGLDGFVADYLSDSVFENNVAYNNDRHGFNVVTSTHDFTLSNNIAYGNGSTGIVVQRG 227
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ A G +Y + + SG LD+ G I +
Sbjct: 228 SENIPSPANITITGGAVYGNGAEGVLIKLSSQVSVSG----LDIHGNGSAGVRIYGRSGV 283
Query: 250 WSSIGGYEKNMTIAQ--HTVIESVVGSSGNDVVIGNSANNVFFES--SGNDVFDGS---S 302
N A +I+S ++G N ++N+ + +G+D
Sbjct: 284 DVFDNTLSNNSLGAPVPEIIIQSYDDTTGVSGKYFNGSDNLIRGNLITGSDNSTYGVAER 343
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
D + + + +VY D V L + ++
Sbjct: 344 NEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVL-GTEANDVITGGAAHELI 402
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDLRNVFGSDRGA 421
A + L G D+ + G D FD
Sbjct: 403 FGLAGKDTLDGGTGDDILVGGAGADKLSGGAGADTFRFDQLTDSYRTATTSATDLLTDFN 462
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
++ I + K S+ ++ V + F +
Sbjct: 463 VSQDRIDLANLGFTGLGSGKNGTLNISYNATLDRTYVKSLDVDASGNRFELGLTGNLKDT 522
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYIT--HGVKEGRNPDAFKALEYIASHEDLINA 539
S+ + + G A I GV + A + L
Sbjct: 523 LNASHFIFQRVTEGTAGGDTLTGTAGNDVINGNAGVDRIDGGAGADTINGGADADTLTGG 582
Query: 540 FADAPDLVQAGKDHFSNF 557
+ + D + N+
Sbjct: 583 AGADVFVYSSRLDSYRNY 600
>gi|319638256|ref|ZP_07993019.1| type I secretion target repeat protein [Neisseria mucosa C102]
gi|317400529|gb|EFV81187.1| type I secretion target repeat protein [Neisseria mucosa C102]
Length = 408
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 88/297 (29%), Gaps = 53/297 (17%)
Query: 83 SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
+ G+ D N +++ G I + HE+GHALG H
Sbjct: 45 FGSQGHGFFRIVDGSKGAFYNSKDGNIYLEQ-GSRHITARTISHEVGHALG-KHQAKAAS 102
Query: 143 GYPVYGVDNDY-----ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS----------D 187
Y F + M + + + S G D
Sbjct: 103 YYNTAKAYAQARGYGEAEAIFNEARMVAYEERYNGRAYSTGISGNLYPYIKGKSFGEVKD 162
Query: 188 IVAVQKIYGAPKGSLGNNI----------YKIEVQQKDSPFI------------------ 219
++A Q +YG + +I Y + + S
Sbjct: 163 LIARQNMYGMYPSNGTGSIRMTYYETDIEYFLNTRTNFSKDFEEAFLSPNFKQLFVKHMA 222
Query: 220 -QTIYDSGGDDLLDLTLIGGVKNYIDLNTESW----SSIGGYEKNMTIAQHTVIESVVGS 274
+ + G++ + + + ++++ + + G + + + ++G
Sbjct: 223 NYDTFGNKGNNKIVADGSYSRDSLLIGRSKTYLKSGAYMYGDAGDDVLKGTNQNDILLGG 282
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
SGNDV+IG + N++ +SG D G G D Y I + V
Sbjct: 283 SGNDVLIGGNGNDILVGNSGRDKLFGGKGYDK---YRADNSDIIRDSDGKGEVSLNG 336
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 4/131 (3%)
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
Y + + + + +D L + +L+ T + L+
Sbjct: 222 ANYDTFGNKGNNKIVADGSYSRDSLLIGRSKTYLKSGAYMYGDAGDDVLKGTNQNDILLG 281
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYL----GSYDDLRNVFGSDRGAAARHYITH 429
G DV + GRD F Y + D +R+ G + + +
Sbjct: 282 GSGNDVLIGGNGNDILVGNSGRDKLFGGKGYDKYRADNSDIIRDSDGKGEVSLNGYILQG 341
Query: 430 GVKEGRNPDAF 440
GV++ PD F
Sbjct: 342 GVRDLSKPDRF 352
>gi|89067955|ref|ZP_01155399.1| type I secretion target repeat protein [Oceanicola granulosus
HTCC2516]
gi|89046553|gb|EAR52609.1| type I secretion target repeat protein [Oceanicola granulosus
HTCC2516]
Length = 818
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 60/255 (23%), Gaps = 15/255 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGG-----VKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ I TIY GG D++D + I I G N +
Sbjct: 370 DDSLYGGAGIDTIYGGGGADVIDGGSGNDLLHGDGGDDIIDGGTGDDRITGGAGNDQMRG 429
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G SG D + G S + + D G D + ++
Sbjct: 430 GAGRDTMSGGSGRDSLHGGSEADYLSGGAEADHLAGGDDND--VLHGDEGNDRLDGGAGN 487
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+Y H D L+ L A + L +G D
Sbjct: 488 DTLYGG--HGDDTLAG------GTGNDTLEGGDGNDSLAGDAGDDTLGGGLGADTISGGA 539
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+E + L +DL A +
Sbjct: 540 GNDTIIFAEADSVEGGDGDDLFVLEDLGEANNGTITAIGGEGDETHGDTLQLGKLADLET 599
Query: 445 YIASHEDLINAFADA 459
++ D
Sbjct: 600 LTYTNTDDAFGGLSG 614
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/314 (12%), Positives = 76/314 (24%), Gaps = 40/314 (12%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHAL----GLMHPGSYNGGYPVYGVDNDYENDSF 158
D A G L G +H + G Y D
Sbjct: 301 TASGNDSVSGQTVTAGNSGETAADAAGSVLVDIAGPVHRIEIDYDNLSSGGQAVYLTDIH 360
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ---KIYGAPKGSLGNNIYKIEVQQKD 215
++ S A +D++ + G + + +
Sbjct: 361 YRTMASVDDDDSLYGGAGIDTIYGGGGADVIDGGSGNDLLHGDGGDDIIDGGTGDDRITG 420
Query: 216 SPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESW--------SSIGGYEKNMT 261
+ G D + D G +Y+ E+ + G E N
Sbjct: 421 GAGNDQMRGGAGRDTMSGGSGRDSLHGGSEADYLSGGAEADHLAGGDDNDVLHGDEGNDR 480
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND------------------VFDGSSG 303
+ +++ G G+D + G + N+ GND G +G
Sbjct: 481 LDGGAGNDTLYGGHGDDTLAGGTGNDTLEGGDGNDSLAGDAGDDTLGGGLGADTISGGAG 540
Query: 304 LDTFFYYAPSYLYKIYRFENAII-VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
DT + + + ++ + E + + L
Sbjct: 541 NDTIIFAEADSVEGGDGDDLFVLEDLGEANNGTITAIGGEGDETHGDTLQLGKLADLETL 600
Query: 363 EYTASYEDLIQVIG 376
YT + + + G
Sbjct: 601 TYTNTDDAFGGLSG 614
>gi|220921927|ref|YP_002497228.1| endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS
2060]
gi|219946533|gb|ACL56925.1| Endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS
2060]
Length = 1016
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 59/220 (26%), Gaps = 20/220 (9%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+A ++ + + + + G A + G+DV G+ G D F +
Sbjct: 751 LAFAVEVDDPIPPAAAERLTGTDAADTLRGGWGDDVVFGALGNDLLFGENGRD----FIG 806
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
A + + +D + D + A + + G D
Sbjct: 807 AGAGDDFASGGFGRD------EVHGEDGNDLLFGDDDDDGVYGEAGNDRVYGGTGNDFLT 860
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+G D F G +DL + + + A
Sbjct: 861 GDAGNDTVSGEQGNDKVFG-----GIGNDLLLGNEGNDFL-----GGGAGSDMLSGGAGD 910
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+D++ A LV FG +GR V
Sbjct: 911 DGLNGEDGDDVLFGNAGNDALVGGAGRDIFAFGRGDGRDV 950
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 68/238 (28%), Gaps = 44/238 (18%)
Query: 203 GNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIG 254
G+++ I GDD + G N + + +
Sbjct: 783 GDDVVFGALGNDLLFGENGRDFIGAGAGDDFASGGFGRDEVHGEDGNDLLFGDDDDDGVY 842
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + T + + G +GND V G N+ F GND+ G+ G D
Sbjct: 843 GEAGNDRVYGGTGNDFLTGDAGNDTVSGEQGNDKVFGGIGNDLLLGNEGND--------- 893
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ D LS +L A + L+
Sbjct: 894 -------------FLGGGAGSDMLSG------GAGDDGLNGEDGDDVLFGNAGNDALVGG 934
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G+D+F FG +GRD+ D G D+ + G + +
Sbjct: 935 AGRDIFA-------FGRGDGRDVVQDFVAG-GPEADILSFNGGVFTRVDQVWAASAQA 984
Score = 42.5 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 44/183 (24%), Gaps = 4/183 (2%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
ERL D ++ + L G+D + GRD
Sbjct: 767 ERLTGTDAADTLRGGWGDDVVFGALGNDLLFGENGRDFIGAGAGDDFASGGFGRDEVHGE 826
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
+ D + R Y G + ++ + +
Sbjct: 827 DGNDLLFGDDDDDGVYGEAGNDRVYGGTGNDFLTGDAGNDTVSGEQGNDKVFGGIGNDLL 886
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD--LRNVFGSD--RGAAARHYITHGVKE 517
L G D + G D L G+D G A R G +
Sbjct: 887 LGNEGNDFLGGGAGSDMLSGGAGDDGLNGEDGDDVLFGNAGNDALVGGAGRDIFAFGRGD 946
Query: 518 GRN 520
GR+
Sbjct: 947 GRD 949
>gi|163796168|ref|ZP_02190130.1| putative secreted calcium-binding protein [alpha proteobacterium
BAL199]
gi|159178627|gb|EDP63167.1| putative secreted calcium-binding protein [alpha proteobacterium
BAL199]
Length = 658
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 85/251 (33%), Gaps = 15/251 (5%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ F + I +G +D + N L + ++ ++ + ++VV S
Sbjct: 376 AGFDRVIALTGRNDAIAEVSGTNNANGWRLPADDFADYSDTADSLLVVALDGADTVVAGS 435
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-- 333
G+D+V G ++V +G+D G +G D AP+ + ++ V +
Sbjct: 436 GDDLVAGGGGDDVIDGGAGSDTLLGGTGDDLIIGGAPAEGGSVEDGNASVAVDLGVDVRV 495
Query: 334 -KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
S VE + ID +L + L G DV +
Sbjct: 496 IGVRLSSGVETEVSTGRSIDIGGTGNGDLLYGNQGADTLSGGNGDDVLFGGQGNDRLDGG 555
Query: 393 EGRDITF----DSYLYLGSYDDLRNV-FGSDRGAAARHYITHGVK-------EGRNPDAF 440
G DI D YL G+ D+ + G A + HG + G +F
Sbjct: 556 AGDDILLGGVGDDYLIGGNGADVFVIDSGGGSDTVADLNLQHGDRIALRIDINGTGIASF 615
Query: 441 KALEYIASHED 451
L A+ D
Sbjct: 616 DDLMDRATDTD 626
>gi|330890708|gb|EGH23369.1| calcium binding hemolysin protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 521
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/267 (14%), Positives = 73/267 (27%), Gaps = 10/267 (3%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TL G N + ++ G N T + +++ G +GND++ G + N+ +
Sbjct: 135 DETLSGTSGNDVISAGAGDDTVNGGSGNDTFSGGAGADTLNGDAGNDLLQGGAGNDTLYG 194
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
GNDV DG +G D Y + +Y ANE + L V+ +
Sbjct: 195 GDGNDVLDGGAGNDQLNGGDGDDTYLFGKGAGQDTIYYANEARVGKLDTVKLADLNVSDV 254
Query: 352 DSVNVKQRSILEYTASYE----------DLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
++ + + D D + + + +
Sbjct: 255 SITRDSSDLLIRVNGTTDNLRVMNHFAEDATSGYQIDQLQFADGTLWSQSTIKSQVLLGN 314
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
+ + G L ++ L +
Sbjct: 315 SSDQTLRGYASDDVINAGDVDDTVSGGAGKDSLYGGKGIDMLYGEEGNDRLYGEAGNDTL 374
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G D + + S +Y
Sbjct: 375 YGGSGNDVLNGGTGNDSLIGGDGSDIY 401
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/343 (9%), Positives = 77/343 (22%), Gaps = 43/343 (12%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ SD S + D + G G T+ +
Sbjct: 126 SQVLQGSDSDETLSGTSGNDVISAGAGDDTVNGGSGNDTFSGGAGADTLNGDAGNDLLQG 185
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G +G + G + + + F + A D V
Sbjct: 186 GAGNDTLYGGDGNDVLDGGAGNDQLNGGDGDDTYLFGKGAGQDTIYYANEARVGKLDTVK 245
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ + ++ + + T + + G + +
Sbjct: 246 LADL------NVSDVSITRDSSDLLIRVNGTTDNLRVMNHFAEDATSGYQIDQLQFADGT 299
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
K+ + ++ +++ G + +DV+ ++ +G D G G+D +
Sbjct: 300 LWSQSTIKSQVLLGNSSDQTLRGYASDDVINAGDVDDTVSGGAGKDSLYGGKGIDMLY-- 357
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ L + +
Sbjct: 358 -----------------------------------GEEGNDRLYGEAGNDTLYGGSGNDV 382
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
L G D + +S G + + S D+
Sbjct: 383 LNGGTGNDSLIGGDGSDIYEISIGSGRDVINNYDVSSGTDVLQ 425
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/363 (12%), Positives = 84/363 (23%), Gaps = 65/363 (17%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE-------SVVGSS 275
G+DL+ L + + +S ++ G + A +V + + GS
Sbjct: 74 VRRDGNDLIIRVLGSTDSLRVVYHFQSDAAGGYQIDRLVFADGSVWDQTQIKSQVLQGSD 133
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
++ + G S N+V +G+D +G SG DTF +
Sbjct: 134 SDETLSGTSGNDVISAGAGDDTVNGGSGNDTF----------------------SGGAGA 171
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D L+ L + L G D + +G
Sbjct: 172 DTLNG------DAGNDLLQGGAGNDTLYGGDGNDVLDGGAGNDQLNGGDGDDTYLFGKGA 225
Query: 396 ----------------------DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
D+ DL + H ++
Sbjct: 226 GQDTIYYANEARVGKLDTVKLADLNVSDVSITRDSSDLLIRVNGTTDNLRV--MNHFAED 283
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE-GRFVTFDSYLYLGSY 492
+ L++ + L + ++ D + G+
Sbjct: 284 ATSGYQIDQLQFADGTLWSQSTIKSQVLLGNSSDQTLRGYASDDVINAGDVDDTVSGGAG 343
Query: 493 DDLRNVFGS-----DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
D R Y G L ++ LI +
Sbjct: 344 KDSLYGGKGIDMLYGEEGNDRLYGEAGNDTLYGGSGNDVLNGGTGNDSLIGGDGSDIYEI 403
Query: 548 QAG 550
G
Sbjct: 404 SIG 406
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 72/266 (27%), Gaps = 35/266 (13%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE-SSGNDVFDGS-- 301
L S+ G N ++ + + G G+D F +G D +
Sbjct: 2 LGGAGNDSLSGGVGNDSLDGGAGNDQLDGGEGDDT--------YLFGKGAGQDTIYYAYE 53
Query: 302 ---SGLDTFFYYAPSYLYKIYRFENAIIV------------YDANEHKQDFLSDVERLRF 346
LDT + R + ++ + ++RL F
Sbjct: 54 NREGKLDTIKLTDLNASDVSVRRDGNDLIIRVLGSTDSLRVVYHFQSDAAGGYQIDRLVF 113
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
AD + + +L+ + S E L G DV + G D +
Sbjct: 114 ADGSVWDQTQIKSQVLQGSDSDETLSGTSGNDVISAGAGDDTVNGGSGNDT----FSGGA 169
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
D L G+D G D L+ A ++ L D L G
Sbjct: 170 GADTLNGDAGNDLLQ-----GGAGNDTLYGGDGNDVLDGGAGNDQLNGGDGDDTYLFGKG 224
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ + E R D+
Sbjct: 225 AGQDTIYYANEARVGKLDTVKLADLN 250
>gi|304394285|ref|ZP_07376208.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Ahrensia sp. R2A130]
gi|303293725|gb|EFL88102.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Ahrensia sp. R2A130]
Length = 508
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/322 (13%), Positives = 96/322 (29%), Gaps = 21/322 (6%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T+ D++ ++G + D D+ G G ++ +
Sbjct: 123 TTGRLDVRVNGVDDGGDHMQAIGNANAEYETGDGDDMITDLAGDGRLIGGQGADAMIGGA 182
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G N G V + D+ +++ + FG +D+ +
Sbjct: 183 GNDVYDVENIGDTVIEQAINGGTDTVYSTLSHTLADNVENVILKFGDNLDATGNDLTNLL 242
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNT 247
G+ G N + SGG+D DL + + +
Sbjct: 243 ------AGNAGANT------LDGRGGTDMMLGSGGNDTYIIDQSDLIIEYAGEGNDTVRA 290
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ ++ + +N+ + I + G++ + + GN NN+ +G D+ G +G D +
Sbjct: 291 DFDYTLLDHFENLEMGLQANIGT--GNALANTITGNDGNNILDGGAGTDILIGGAGDDIY 348
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + + + ++VE L + Q + L
Sbjct: 349 ILDNSA--DLVTETDQGGTDTVMSSADIHLSANVEALVLTGNAVTGWGNDQSNHLYGNDG 406
Query: 368 YEDLIQVIGQDVFESMKHFYEF 389
L G D + F
Sbjct: 407 VNVLFGRGGSDYMVGGEGDDIF 428
>gi|291222679|ref|XP_002731343.1| PREDICTED: matrix metalloproteinase 19 isoform rasi-1
preproprotein-like [Saccoglossus kowalevskii]
Length = 437
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 54/186 (29%), Gaps = 32/186 (17%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS-- 77
D W + Y+ T D + A WS V LTF E +
Sbjct: 68 DSKWDKRDLTYEYLSYTNDVSKDD-------QRNAISRAFKRWSDVTPLTFTEVTDGGAD 120
Query: 78 -DIKFISSNNG---------------YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+ F+ ++G + P +F + + G G L
Sbjct: 121 ISLDFVVGDHGDGDANAFNRKGEVMAHAYPPGNGDIHFND---LENFAVDSGTADGIDLE 177
Query: 122 HNALHEIGHALGLMHPGSY----NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
A HEIGH+LGL H + + YP Y + D Y + +
Sbjct: 178 WVATHEIGHSLGLGHSEYHKSVMHSKYPGYISNLQLTRDDVNGIQAIYGKNKYYVPMFPS 237
Query: 178 GYCATP 183
P
Sbjct: 238 HSSQAP 243
>gi|163742733|ref|ZP_02150118.1| hypothetical protein RG210_15350 [Phaeobacter gallaeciensis 2.10]
gi|161383988|gb|EDQ08372.1| hypothetical protein RG210_15350 [Phaeobacter gallaeciensis 2.10]
Length = 498
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/250 (12%), Positives = 66/250 (26%), Gaps = 16/250 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
D+ I+ GGDD + + G ++ +
Sbjct: 203 STNVDDTTRSDMIHGRGGDDTIT-------------GGAGKDFLLGGAGEDRLSGGKNDD 249
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +D + GN+ ++ S GND G +G DT + +++
Sbjct: 250 FLDGGLDDDHLSGNAGDDNLRGSLGNDTLIGGAGNDTL---RGDNDVGPDDNADDLLIGG 306
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ D + + L+ + + IL + + G+D +
Sbjct: 307 SGHDSLDGNAGNDTLKAGNGADTLHGGEGDDILNGGRGRDLITGDDGRDTLAGGRANDTL 366
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G D + D N + + G L +
Sbjct: 367 TGGAGNDRLSGGAGHDVMRGDAGNDLLIGGRGHDTLFGSDGADRLIGQSGHDRLTGGSGG 426
Query: 450 EDLINAFADA 459
+ + A
Sbjct: 427 DSFVFARGSG 436
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/288 (13%), Positives = 73/288 (25%), Gaps = 7/288 (2%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + LG+ ++ DS G D L D+ + + + S +
Sbjct: 142 GQDELVLGDGVHTYSFAFDDSAGALLTTTKGRDMLFDVETVRLANQTLHIQEGSATDEAL 201
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N+ + + + G G+D + G + + +G D G + L
Sbjct: 202 HSTNVDDTTRS--DMIHGRGGDDTITGGAGKDFLLGGAGEDRLSGGKND----DFLDGGL 255
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQV 374
+ NA D L D + +L + ++ L
Sbjct: 256 DDDHLSGNAGDDNLRGSLGNDTLIGGAGNDTLRGDNDVGPDDNADDLLIGGSGHDSLDGN 315
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D ++ EG DI D + A G
Sbjct: 316 AGNDTLKAGNGADTLHGGEGDDILNGGRGRDLITGDDGRDTLAGGRANDTLTGGAGNDRL 375
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ A ++ LI G D +
Sbjct: 376 SGGAGHDVMRGDAGNDLLIGGRGHDTLFGSDGADRLIGQSGHDRLTGG 423
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/250 (14%), Positives = 61/250 (24%), Gaps = 11/250 (4%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ D G G+ + + L H G
Sbjct: 207 DDTTRSDMIHGRGGDDTITGGAGKDFLLGGAGEDRLSGGKNDDFLDGGLDDDHLSGNAGD 266
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ G + + D + D ++ G G
Sbjct: 267 DNLRGSLGNDTLIGGAGNDTLRGDNDVGPDDNADDLLIGGSGHD--SLDGNAGNDTLKAG 324
Query: 204 NNIYK-----IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
N + I G D L GG N + G
Sbjct: 325 NGADTLHGGEGDDILNGGRGRDLITGDDGRDTL----AGGRANDTLTGGAGNDRLSGGAG 380
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + ++G G+D + G+ + SG+D G SG D+F + S I
Sbjct: 381 HDVMRGDAGNDLLIGGRGHDTLFGSDGADRLIGQSGHDRLTGGSGGDSFVFARGSGRDTI 440
Query: 319 YRFENAIIVY 328
F+ +
Sbjct: 441 TDFQLGEDLI 450
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 74/285 (25%), Gaps = 14/285 (4%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+G + + + N+ +G+D G +G D + Y F+++
Sbjct: 114 NGGERINAFAGNDTIRAGNGDDTIFGGAGQDELVLGDGVHTYSF-AFDDSAGALLTTTKG 172
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+D L DVE +R A+Q + ++ + +D D+ G
Sbjct: 173 RDMLFDVETVRLANQTLHIQEGSATDEALHSTNVDD---TTRSDMIHGRGGDDTITGGAG 229
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL-- 452
+D + F G R L A ++ L
Sbjct: 230 KDFLLGGAGEDRLSGGKNDDFLDGGLDDDHLSGNAGDDNLRGSLGNDTLIGGAGNDTLRG 289
Query: 453 -----INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ AD + G D + + G D G R
Sbjct: 290 DNDVGPDDNADDLLIGGSGHDSLDGNAGNDTLKAGNGADTLHGGEGDDILNGGRGRDLIT 349
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G A L A ++ L AG D
Sbjct: 350 ---GDDGRDTLAGGRANDTLTGGAGNDRLSGGAGHDVMRGDAGND 391
>gi|109082872|ref|XP_001100232.1| PREDICTED: matrix metalloproteinase-14-like [Macaca mulatta]
Length = 582
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 46/164 (28%), Gaps = 35/164 (21%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W I + T + E R A W L F E
Sbjct: 114 IQGLKWQYNEITFCIQNYTPKVGEY-------ATYEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + +FD A+ W G
Sbjct: 167 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFP--GPNIGGDTHFDSAEPWTVG 224
Query: 114 IGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 225 NEDLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|113475637|ref|YP_721698.1| peptidase-like protein [Trichodesmium erythraeum IMS101]
gi|110166685|gb|ABG51225.1| peptidase-like [Trichodesmium erythraeum IMS101]
Length = 1594
Score = 66.0 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ G+N++ + + T+ GGDD L N I + + G +
Sbjct: 10 SGTPGDNVWPLSEDNSCN---DTLNGRGGDDKL----YASQGNDILYGGDGDDKLYGQQG 62
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
N + + + G+ G D + GN + G D +G +G DT
Sbjct: 63 NDKLYGEQGNDRLYGNGGRDRLYGNGGCDRLHGGRGKDTLNGGAGNDTL 111
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 19/148 (12%), Positives = 35/148 (23%), Gaps = 30/148 (20%)
Query: 248 ESWSSIGGYEKNMT--IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
G N+ ++ +++ G G+D + + N++ + G+D G G D
Sbjct: 5 TGVDWSGTPGDNVWPLSEDNSCNDTLNGRGGDDKLYASQGNDILYGGDGDDKLYGQQGND 64
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ E D L L
Sbjct: 65 KLY----------------------GEQGNDRLYG------NGGRDRLYGNGGCDRLHGG 96
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ L G D + E
Sbjct: 97 RGKDTLNGGAGNDTLNGGAGKDKVWKEE 124
Score = 42.9 bits (99), Expect = 0.16, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 24/97 (24%), Gaps = 4/97 (4%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD--- 400
L + IL + L G D + + GRD +
Sbjct: 30 LNGRGGDDKLYASQGNDILYGGDGDDKLYGQQGNDKLYGEQGNDRLYGNGGRDRLYGNGG 89
Query: 401 -SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
L+ G D N + KE ++
Sbjct: 90 CDRLHGGRGKDTLNGGAGNDTLNGGAGKDKVWKEEKD 126
Score = 42.5 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 27/139 (19%), Gaps = 41/139 (29%)
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
NS N+ G+D S G D +
Sbjct: 23 DNSCNDTLNGRGGDDKLYASQGNDILY--------------------------------- 49
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
D + L + L G+D G+D
Sbjct: 50 ----GGDGDDKLYGQQGNDKLYGEQGNDRLYGNGGRDRLYGNGGCDRLHGGRGKDTL--- 102
Query: 402 YLYLGSYDDLRNVFGSDRG 420
D L G D+
Sbjct: 103 -NGGAGNDTLNGGAGKDKV 120
>gi|291383989|ref|XP_002708607.1| PREDICTED: matrix metalloproteinase 10 [Oryctolagus cuniculus]
Length = 477
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 58/199 (29%), Gaps = 48/199 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W+ + Y+ T AL W +V LTF
Sbjct: 109 WTKTHLTYRIVNYTPDLP-------RDAVDAAIEKALKVWEEVTPLTFSRKHEGEADIMI 161
Query: 73 ---TSIHSDIK-FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F + +++FD + W GT L A HE+
Sbjct: 162 SFAVKEHGDFYPFDGPGYSLAHAYPPGPGLYGDVHFDDDEKWTES-ASGTNLFLVAAHEL 220
Query: 129 GHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL+H + YPVY D D
Sbjct: 221 GHSLGLLHSANPEALMYPVYNTFTDLAR-------------------------FRLSQDD 255
Query: 188 IVAVQKIYGAPKGSLGNNI 206
+ +Q +YG P S G ++
Sbjct: 256 VDGIQSLYGPPPTSPGTSV 274
>gi|220925425|ref|YP_002500727.1| group 1 glycosyl transferase [Methylobacterium nodulans ORS 2060]
gi|219950032|gb|ACL60424.1| glycosyl transferase group 1 [Methylobacterium nodulans ORS 2060]
Length = 1239
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 59/310 (19%), Positives = 88/310 (28%), Gaps = 88/310 (28%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR-----------------NP 437
D FD Y Y DL + G R + +HY+ HG +EGR P
Sbjct: 24 DDTEFDHEFYSRLYPDLHRLKG--RKSLLKHYVEHGRREGRFATVDAYMADLVAKYGEAP 81
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE---------------GRFVT 482
+ F Y + DL F DA HF G E R
Sbjct: 82 EDFDPGLYRELNPDLTAQFTDAWQFTA----HFLKHGRAEDRRYRLDTSAETAEFTRDAG 137
Query: 483 ---------------------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
FD + D + R R ++ G+
Sbjct: 138 GMSKDAFLQDHGLAAGRWQLRFDLAQFRQLNADWITTPPATRSEGIRLFVESGIDRLAPI 197
Query: 522 DA---FKALEYIASHEDLINAFADAPDLVQAGK-DHFSNFGYEE--------------GR 563
+ F Y A++ +L A H+ + G E+ GR
Sbjct: 198 NGDSIFDPAFYRAAYP-------VDRNLDDAALYRHWLSVGIEQNWAPNEAARIFALIGR 250
Query: 564 SIT---FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSE 620
+ F+ D Y S R+ +H++ HG +E R +SG Q +
Sbjct: 251 TAFPECFDVDGYRRSMPASARNSAQGRTQVLEHWLDHGFQEDRLDVVSG-QGAADFFALV 309
Query: 621 KSRDKADLSL 630
R+
Sbjct: 310 GRRELLRQRF 319
>gi|163736619|ref|ZP_02144038.1| hypothetical protein RGBS107_15846 [Phaeobacter gallaeciensis
BS107]
gi|161390489|gb|EDQ14839.1| hypothetical protein RGBS107_15846 [Phaeobacter gallaeciensis
BS107]
Length = 498
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 66/251 (26%), Gaps = 16/251 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ D+ I+ GGDD + + G ++
Sbjct: 202 LSTNVDDTNRSDMIHGRGGDDTIT-------------GGAGRDFLLGGAGEDRLSGGKND 248
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +D + GN+ ++ S GND G +G DT + +++
Sbjct: 249 DFLDGGLDDDHLSGNAGDDNLRGSLGNDTLIGGAGNDTL---RGDNDVGPDDNADDLLIG 305
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ D + + L+ + IL + + G+D +
Sbjct: 306 GSGHDSLDGNAGNDTLKAGNGADTLHGGAGDDILNGGRGRDLITGDDGRDTLAGGRANDT 365
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G D + D N + + G L +
Sbjct: 366 LTGGAGNDRLSGGAGHDVMRGDAGNDLLIGGRGHDTLFGSDGADRLIGQSGHDRLTGGSG 425
Query: 449 HEDLINAFADA 459
+ + A
Sbjct: 426 GDSFVFARGSG 436
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/282 (13%), Positives = 70/282 (24%), Gaps = 23/282 (8%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL--NTESWSSIGGY 256
+ G ++ + + I + D L+ N D+ +I G
Sbjct: 168 TTTKGRDMLFNVETVRLANQTLRIQEGSATDEALLSTNVDDTNRSDMIHGRGGDDTITGG 227
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + + G +D + G ++ ++G+D GS G DT
Sbjct: 228 AGRDFLLGGAGEDRLSGGKNDDFLDGGLDDDHLSGNAGDDNLRGSLGNDTLI-------- 279
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ N+ D + + L+ A + L G
Sbjct: 280 ---GGAGNDTLRGDNDVGPD----------DNADDLLIGGSGHDSLDGNAGNDTLKAGNG 326
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D GRD+ N + R G R
Sbjct: 327 ADTLHGGAGDDILNGGRGRDLITGDDGRDTLAGGRANDTLTGGAGNDRLSGGAGHDVMRG 386
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
L H+ L + + Q G D + +
Sbjct: 387 DAGNDLLIGGRGHDTLFGSDGADRLIGQSGHDRLTGGSGGDS 428
Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/285 (15%), Positives = 73/285 (25%), Gaps = 14/285 (4%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
+G + + G + N+ G+D G +G D + Y F+++
Sbjct: 114 NGGERITGFAGNDTIRAGDGDDTIFGGAGQDELVLGDGVHTYSF-AFDDSAGALLTTTKG 172
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+D L +VE +R A+Q + + + +D D+ G
Sbjct: 173 RDMLFNVETVRLANQTLRIQEGSATDEALLSTNVDD---TNRSDMIHGRGGDDTITGGAG 229
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL-- 452
RD + F G R L A ++ L
Sbjct: 230 RDFLLGGAGEDRLSGGKNDDFLDGGLDDDHLSGNAGDDNLRGSLGNDTLIGGAGNDTLRG 289
Query: 453 -----INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ AD + G D + + G D G R
Sbjct: 290 DNDVGPDDNADDLLIGGSGHDSLDGNAGNDTLKAGNGADTLHGGAGDDILNGGRGRDLIT 349
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G A L A ++ L AG D
Sbjct: 350 ---GDDGRDTLAGGRANDTLTGGAGNDRLSGGAGHDVMRGDAGND 391
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/261 (13%), Positives = 64/261 (24%), Gaps = 11/261 (4%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + + + D G G+ + + L
Sbjct: 196 ATDEALLSTNVDDTNRSDMIHGRGGDDTITGGAGRDFLLGGAGEDRLSGGKNDDFLDGGL 255
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
H G + G + + D + D ++
Sbjct: 256 DDDHLSGNAGDDNLRGSLGNDTLIGGAGNDTLRGDNDVGPDDNADDLLIGGSGHD--SLD 313
Query: 193 KIYGAPKGSLGNNIYK-----IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
G GN + I G D L GG N
Sbjct: 314 GNAGNDTLKAGNGADTLHGGAGDDILNGGRGRDLITGDDGRDTL----AGGRANDTLTGG 369
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G + + + ++G G+D + G+ + SG+D G SG D+F
Sbjct: 370 AGNDRLSGGAGHDVMRGDAGNDLLIGGRGHDTLFGSDGADRLIGQSGHDRLTGGSGGDSF 429
Query: 308 FYYAPSYLYKIYRFENAIIVY 328
+ S I F+ +
Sbjct: 430 VFARGSGRDTITDFQLGEDLI 450
>gi|109108472|ref|XP_001098589.1| PREDICTED: macrophage metalloelastase [Macaca mulatta]
Length = 470
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 60/197 (30%), Gaps = 47/197 (23%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-- 76
R Q W ++I Y+ + T D+ + A WS V L F +
Sbjct: 105 RGQIWRKHYITYRINNYTPDMNRKDVDY-------AIQKAFQVWSNVTPLKFSRINTGVA 157
Query: 77 -----------SDIK-FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
D F + +FD + W +GT L A
Sbjct: 158 DILVVFARGAHGDFHAFDGKGGTIAHAFGPGPGIGGDAHFDDDEFWTTH-SEGTNLFLVA 216
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+HE+GH+LGL H P + Y+ T +S
Sbjct: 217 VHELGHSLGLGHS-----SDPKAIMFPTYKYVDINTFHLS-------------------- 251
Query: 185 VSDIVAVQKIYGAPKGS 201
DI +Q +YG PK
Sbjct: 252 ADDIRGIQSLYGGPKEH 268
>gi|71896245|ref|NP_001025559.1| matric metalloproteinase 14 [Xenopus (Silurana) tropicalis]
gi|60649681|gb|AAH90600.1| matrix metallopeptidase 14 (membrane-inserted) [Xenopus (Silurana)
tropicalis]
Length = 578
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W V L F E
Sbjct: 105 IQGLKWQHKDITFCIQNYTPKIGEYSTYE-------AIRRAFKVWESVTPLRFREVRYVD 157
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + R
Sbjct: 158 IKDGYTKHADIMLFFAEGFHGDSTPFDGEGGFLAHAYFPGPGIGGDTHFDSAEPWTARND 217
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + D +N
Sbjct: 218 DLDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTQN 259
>gi|77457736|ref|YP_347241.1| hemolysin-type calcium-binding region [Pseudomonas fluorescens Pf0-1]
gi|77381739|gb|ABA73252.1| putative hemolysin-type calcium-binding region protein [Pseudomonas
fluorescens Pf0-1]
Length = 1628
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/396 (13%), Positives = 98/396 (24%), Gaps = 28/396 (7%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ + I E + R + + ++ E + + F N
Sbjct: 1147 DIYYVNGGGVTIIEQAGGGNDEIRVSWNTHTMAANV--ERMTYTGTVAFTGYGNAGDNIM 1204
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ AD + G G T+ ++ + L G V+
Sbjct: 1205 TGGIGNDVLYGGGGADQFIGGAGMDTVSYDDSTAGVSINLKTGVSTGIAMGDTYNSVEAM 1264
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK---- 208
+ V S + S + K + G+
Sbjct: 1265 TGSKFNDVFVGSSVALAINGGLGLDMVSYESSDSAVTIDLKTNANAGDAAGDTFAGIEIF 1324
Query: 209 ----IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
S G D+ D Y + T ++ A+
Sbjct: 1325 QGSRFADTFLGSTANDNFVGGAGADVFDGREGIDTVWYANNTTAVNINLQTGVSQGGDAE 1384
Query: 265 HTVI---ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY----------- 310
V ES++G+S ND + GN+A N GNDV G G D +
Sbjct: 1385 GDVFINVESLIGTSFNDTLTGNAAANGLEGGLGNDVIYGGDGNDVIYGSLYTPLGPFAVN 1444
Query: 311 ---APSYLYKIYRFENAIIVYDANEH-KQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+Y + A + + + + +L T
Sbjct: 1445 VAAGGPQADLLYGGNGNDTIVAAPDDRGTQAFGEAGNDTITVVYGMADGGEGDDLLTGTG 1504
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+ L G D FG + T ++
Sbjct: 1505 AGFSLFGGAGADKLLLQGPGSAFGGEDNDTYTVNTS 1540
Score = 58.3 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 64/500 (12%), Positives = 134/500 (26%), Gaps = 43/500 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ + + E + R E + ++ E + F + N
Sbjct: 112 DIYFVNGGGVTVIEQAGGGNDEVRVTYKEHTLAANV--ERLTYVGTESFTGAGNASDNII 169
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + AD + G G T+ ++ +G L L + G D +
Sbjct: 170 TGGNGNDTLLGGGGADQFFGGAGMDTVSYDDST--VGVTLNLKTGVNSGIGAGDVYNDIE 227
Query: 153 YENDS------FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
S + F + A + D+ + G + G+ +
Sbjct: 228 AITGSKYNDTFIADGRVFAFNGGAGTDTVDYSTSAEAINVDVRPGIGLAGTGGDAQGDTL 287
Query: 207 YK--------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+P ++ G D + GG I+ + K
Sbjct: 288 ASIEKVIGSAFNDTFTAAPLSTVTFEGGAGDDIYFVN-GGGVTVIEQAGGGNDEVRVTYK 346
Query: 259 NMTIAQ--------HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
T+A T + G++ ++++ G + N+ G D F G +G+DT Y
Sbjct: 347 EHTLAANVERLTYVGTESFTGAGNASDNIITGGNGNDTLLGGGGADQFFGGAGMDTVSYD 406
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + N ++ D +D+E + + + +
Sbjct: 407 DSTVGVTL----NLKTGVNSGIGAGDVYNDIEAITGSKYNDTFIADGRVFAFN------- 455
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G D + + I D L ++ A +
Sbjct: 456 --GGTGTDTVDYSTSAEAINVDVRPGIGLAGTGGDAQGDTLASIEKVIGSAFNDTFTAAP 513
Query: 431 VKEGRNPDAFKALEYIASHEDLI---NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ Y + + A ++ K+H E +V +S+
Sbjct: 514 LSTVTFEGGAGDDIYFVNGGGVTVIEQAGGGNDEVRVTYKEHTLAANVERLTYVGTESFT 573
Query: 488 YLGSYDDLRNVFGSDRGAAA 507
G+ D G+
Sbjct: 574 GAGNASDNIITGGNGNDTLL 593
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 64/494 (12%), Positives = 136/494 (27%), Gaps = 43/494 (8%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D+ + + E + R E + ++ E + F + N
Sbjct: 526 DIYFVNGGGVTVIEQAGGGNDEVRVTYKEHTLAANV--ERLTYVGTESFTGAGNASDNII 583
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP-----GSYNGGYPVY 147
+ + AD + G G T+ ++ +G L L G+ + +
Sbjct: 584 TGGNGNDTLLGGGGADQFFGGAGMDTVSYDDST--VGVTLNLKTGVNSGIGAGDVYNDIE 641
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
+ ND+F+ + + D + A + D+ + G + G+ +
Sbjct: 642 AITGSKYNDTFIADGRVFAFNGGTGTDTVDYSTSAEAINVDVRPGIGLAGTGGDAQGDTL 701
Query: 207 YK--------IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+P ++ G D + GG I+ + K
Sbjct: 702 ASIEKVIGSAFNDTFTAAPLSTVTFEGGAGDDIYFVN-GGGVTVIEQAGGGNDEVRVTYK 760
Query: 259 NMTIA--------QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
T+A T + G+ ++++ G ++N++ G D F G +G+DT Y
Sbjct: 761 EHTLAANVERLTFTGTGSFTGAGNDSDNIITGGASNDILKGGGGADQFFGGAGMDTASYD 820
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ + ++ D + +E + K +
Sbjct: 821 DSTVGVTLDLKTG----INSGIAAGDVYNSIEAI---------AGSKYNDTFFADSRVFA 867
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G D + + I D L ++ A +
Sbjct: 868 FDGGTGFDTVDYSTSAEAINVDVRPGIGLAGTGGDAQGDTLSSIEKVIGSAFNDTFTAAP 927
Query: 431 VKEGRNPDAFKALEYIASHEDLI---NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ Y + + A ++ K+H E F S+
Sbjct: 928 LSTVTFEGGAGDDIYFVNGGGVTVIEQAGGGNDEVRVTYKEHTLAANVERLTFTGTGSFT 987
Query: 488 YLGSYDDLRNVFGS 501
G+ D G+
Sbjct: 988 GAGNDSDNIITGGA 1001
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 72/272 (26%), Gaps = 9/272 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ G D +D + N S + GG + T+ T I
Sbjct: 1062 YNDTFFADSRVFAFDGGTGFDTVDYSTSAEAVNVEIRPGTSLAGTGGDAQGDTL---TNI 1118
Query: 269 ESVVGSSGNDVVIGNS-ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
E VVGS+ ND + + F +G+D++ + G T A +I N +
Sbjct: 1119 EKVVGSAFNDTFTAAAISYATFEGGAGDDIYYVNGGGVTIIEQAGGGNDEIRVSWNTHTM 1178
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
E + +L + I G D +
Sbjct: 1179 AANVERMTYTGTVAFTGYGNAGDNIMTGGIGNDVLYGGGGADQFIGGAGMDTVS----YD 1234
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-KALEYI 446
+ ++ + D +V ++ V N + Y
Sbjct: 1235 DSTAGVSINLKTGVSTGIAMGDTYNSVEAMTGSKFNDVFVGSSVALAINGGLGLDMVSYE 1294
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+S + + D F+ +G
Sbjct: 1295 SSDSAVTIDLKTNANAGDAAGDTFAGIEIFQG 1326
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 31/207 (14%), Positives = 55/207 (26%), Gaps = 10/207 (4%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I +++ G+SG+D + G N+V S+G D DG +G DT Y A +
Sbjct: 4 INGTNGADTLNGTSGDDEINGLGGNDVIIGSAGADKIDGGAGFDTVDYSASFAGVNVDIR 63
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + + D L +E++ + + +D+ V G V
Sbjct: 64 PGTGLPGTGGDAQGDTLIGIEKVIGSAFNDTFTTDAYLYATYEGGAGDDIYFVNGGGVTV 123
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ D L + G
Sbjct: 124 IEQ----------AGGGNDEVRVTYKEHTLAANVERLTYVGTESFTGAGNASDNIITGGN 173
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKD 468
+ + F A D
Sbjct: 174 GNDTLLGGGGADQFFGGAGMDTVSYDD 200
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 65/229 (28%), Gaps = 18/229 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
S I G D +D + N GG + T+
Sbjct: 26 GGNDVIIGSAGADKIDGGAGFDTVDYSASFAGVNVDIRPGTGLPGTGGDAQGDTLIG--- 82
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE V+GS+ ND ++ ++G +G D +F V
Sbjct: 83 IEKVIGSAFNDTFTTDAYL--------YATYEGGAGDDIYFVNGGGVTVIEQAGGGNDEV 134
Query: 328 YDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH- 385
+ ++VERL + + +I+ + L+ G D F
Sbjct: 135 RV-TYKEHTLAANVERLTYVGTESFTGAGNASDNIITGGNGNDTLLGGGGADQFFGGAGM 193
Query: 386 ----FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ + + ++ +G+ D ++ +I G
Sbjct: 194 DTVSYDDSTVGVTLNLKTGVNSGIGAGDVYNDIEAITGSKYNDTFIADG 242
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 69/438 (15%), Positives = 110/438 (25%), Gaps = 54/438 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ G D +D + N + GG + T+A I
Sbjct: 648 YNDTFIADGRVFAFNGGTGTDTVDYSTSAEAINVDVRPGIGLAGTGGDAQGDTLA---SI 704
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E V+GS+ ND + V F+G +G D +F V
Sbjct: 705 EKVIGSAFNDTFTAAPLSTV--------TFEGGAGDDIYFVNGGGVTVIEQAGGGNDEVR 756
Query: 329 DANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ ++VERL F +I+ AS + L G D F
Sbjct: 757 V-TYKEHTLAANVERLTFTGTGSFTGAGNDSDNIITGGASNDILKGGGGADQFFGGAGMD 815
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
SYDD D + I G+ G ++ +A+
Sbjct: 816 T-----------------ASYDDSTVGVTLD----LKTGINSGIAAGDVYNSIEAIAGSK 854
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
++ G D E D+R G
Sbjct: 855 YNDTFFADSRVFAFDGGTGFDTVDYSTSAE------------AINVDVRPGIGLAGTGGD 902
Query: 508 RHYITHGVKEGRNPDAFKALEYIA--SHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
T E AF A S D V G +
Sbjct: 903 AQGDTLSSIEKVIGSAFNDTFTAAPLSTVTFEGGAGDDIYFVNGGGVTVIEQAGGGNDEV 962
Query: 566 TFNPDLY-LTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA-----LGISGMQFKSVMNLS 619
+ L + + G+ A + + + G + G QF +
Sbjct: 963 RVTYKEHTLAANVERLTFTGTGSFTGAGNDSDNIITGGASNDILKGGGGADQFFGGAGMD 1022
Query: 620 EKSRDKADLSLSFDHKKV 637
S D + + ++ D K
Sbjct: 1023 TASYDDSTVGVTLDLKTG 1040
Score = 41.3 bits (95), Expect = 0.49, Method: Composition-based stats.
Identities = 61/435 (14%), Positives = 106/435 (24%), Gaps = 48/435 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ G D +D + N + GG + T+A I
Sbjct: 441 YNDTFIADGRVFAFNGGTGTDTVDYSTSAEAINVDVRPGIGLAGTGGDAQGDTLA---SI 497
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E V+GS+ ND + V F+G +G D +F V
Sbjct: 498 EKVIGSAFNDTFTAAPLSTV--------TFEGGAGDDIYFVNGGGVTVIEQAGGGNDEVR 549
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ ++VERL + + AS + G D +
Sbjct: 550 V-TYKEHTLAANVERLTYVGTESFTGA--------GNASDNIITGGNGNDTLLGGGGADQ 600
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
F G D +G +L+ S GA + + + D F A + +
Sbjct: 601 FFGGAGMDTVSYDDSTVGVTLNLKTGVNSGIGAGDVYNDIEAITGSKYNDTFIADGRVFA 660
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ G L S + + +D AA
Sbjct: 661 FNGGTGTDTVDYSTSAEAINVDVRPGIGLAGTGGDAQGDTLASIEKVIGSAFNDTFTAAP 720
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
D V G +
Sbjct: 721 LSTVT----------------------FEGGAGDDIYFVNGGGVTVIEQAGGGNDEVRVT 758
Query: 569 PDLY-LTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA-----LGISGMQFKSVMNLSEKS 622
+ L + + G+ A + + + G + G QF + S
Sbjct: 759 YKEHTLAANVERLTFTGTGSFTGAGNDSDNIITGGASNDILKGGGGADQFFGGAGMDTAS 818
Query: 623 RDKADLSLSFDHKKV 637
D + + ++ D K
Sbjct: 819 YDDSTVGVTLDLKTG 833
Score = 37.1 bits (84), Expect = 9.0, Method: Composition-based stats.
Identities = 69/449 (15%), Positives = 107/449 (23%), Gaps = 58/449 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ G D +D + N + GG + T+ + I
Sbjct: 855 YNDTFFADSRVFAFDGGTGFDTVDYSTSAEAINVDVRPGIGLAGTGGDAQGDTL---SSI 911
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E V+GS+ ND + V F+G +G D +F V
Sbjct: 912 EKVIGSAFNDTFTAAPLSTV--------TFEGGAGDDIYFVNGGGVTVIEQAGGGNDEVR 963
Query: 329 DANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ ++VERL F +I+ AS + L G D F
Sbjct: 964 V-TYKEHTLAANVERLTFTGTGSFTGAGNDSDNIITGGASNDILKGGGGADQFFGGAGMD 1022
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
SYDD D I G +
Sbjct: 1023 T-----------------ASYDDSTVGVTLDLKTGINSGIAAGDVYNSIEAIAGSKYNDT 1065
Query: 448 SHEDL-INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
D + AF V + E R T + + D G+A
Sbjct: 1066 FFADSRVFAFDGGTGFDTVDYSTSAEAVNVEIRPGTSLAGTGGDAQGDTLTNIEKVVGSA 1125
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
T S+ D V G I
Sbjct: 1126 FNDTFTAAAI---------------SYATFEGGAGDDIYYVNGGGVTIIEQAGGGNDEIR 1170
Query: 567 FNPDLYLTS-------YDDLWNV--FGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMN 617
+ + + + Y +G+ I + + G G QF
Sbjct: 1171 VSWNTHTMAANVERMTYTGTVAFTGYGNAGDNIMTGGIGNDVLYG---GGGADQFIGGAG 1227
Query: 618 LSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ S D + +S + K GD
Sbjct: 1228 MDTVSYDDSTAGVSINLKTGVSTGIAMGD 1256
>gi|56681778|gb|AAW21425.1| leukotoxin A [Pasteurellaceae bacterium I43]
Length = 385
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 40/101 (39%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N I ++ + G + TI + + + G G+D++ G + ++ GND
Sbjct: 222 GTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGND 281
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G G D F + I E + ++ + +D
Sbjct: 282 LLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDL 322
Score = 44.8 bits (104), Expect = 0.045, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 47/212 (22%), Gaps = 48/212 (22%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIV------ 327
V ++ F SG DG G D Y +Y + V
Sbjct: 114 VATLGDGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVES 173
Query: 328 ------------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ A + +D L VE + K
Sbjct: 174 GKALHEVTSTHTALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSK 233
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ + G D K G D ++ G +DL +
Sbjct: 234 FNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKG 288
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
D H G + L + S+
Sbjct: 289 DDI--FVHRQGDGNDSITESEGNDKLSFSDSN 318
>gi|73966944|ref|XP_548256.2| PREDICTED: similar to matrix metalloproteinase 28 preproprotein
isoform 1 [Canis familiaris]
Length = 520
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 52/169 (30%), Gaps = 42/169 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYFMEI 102
P + R A WS V L F E ++ +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATVPADIRLTFFQGDHNDGLGNAFDGPGGALGHA 208
Query: 103 N--------FDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
FD + W +G L HEIGH LGL H P P Y
Sbjct: 209 FLPRRGEAHFDGDERWSLSRRRGRNLFVGLAHEIGHTLGLAHSPAPRALMAPYYKRLGRD 268
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+ D++AVQ +YG P+G
Sbjct: 269 ALLSWD---------------------------DVLAVQGLYGKPQGGS 290
>gi|213972191|ref|ZP_03400275.1| mannuronan C-5-epimerase [Pseudomonas syringae pv. tomato T1]
gi|301385400|ref|ZP_07233818.1| mannuronan C-5-epimerase, putative [Pseudomonas syringae pv. tomato
Max13]
gi|302060442|ref|ZP_07251983.1| mannuronan C-5-epimerase, putative [Pseudomonas syringae pv. tomato
K40]
gi|213923051|gb|EEB56662.1| mannuronan C-5-epimerase [Pseudomonas syringae pv. tomato T1]
Length = 1610
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/409 (13%), Positives = 108/409 (26%), Gaps = 27/409 (6%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL +S + ++ G+S +D +IG++ N++ G D G G
Sbjct: 1201 DLGFRGNASDNNDPAAIFAGGQNEGGNIFGTSDDDTLIGSAGNDILDGDQGADQMTGGDG 1260
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L ID ++++
Sbjct: 1261 NDIYVVDNALDTVTESNDSPSQVDTVVSSVSWTLGANVENLLLTGVSAIDGTGNALKNVI 1320
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+S + G D+ + + + + + + D +A
Sbjct: 1321 TGNSSNNVVDGGAGGDLLKGGDGSDSYY------VDDVADRVVETNSDAWVGGVDTVYSA 1374
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRF 480
Y E + D L D + G D S G
Sbjct: 1375 LASYTLGAHLENIAITRTDTANATGNALDNVLYAGAGDNVMDGRDGNDTASYLFASAGVT 1434
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF---KALEYIASHEDLI 537
V ++ + GS G + + L A ++ L
Sbjct: 1435 VALNTSA-------QQATGGSGLDTLKGTENLTGSQFADSLTGNKNANVLNGGAGNDTLS 1487
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
D + +G D + G FN D + +
Sbjct: 1488 GGAGDDVLIGSSGAD--TLIGGTGADRYVFNSID--EVGRDGLRDIINGFKVGEGDKLDF 1543
Query: 598 GMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ R L + F + N + + + +L LY + +
Sbjct: 1544 TGFDARPLTDTHDAFTFIGNSAFSANNTGELRF----ADGVLYGNVDDN 1588
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 65/474 (13%), Positives = 132/474 (27%), Gaps = 24/474 (5%)
Query: 113 GIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G +++ A HE+ L G + + S ++ Q +
Sbjct: 386 GTEANDVITGGAAHELIFGLAGKDTLDGGTGDDILVGGAGADKLSGGAGADTFRFDQLTD 445
Query: 173 MDASFGYCATPMVSD--------IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
+ AT +++D +A G G G + D
Sbjct: 446 SYRTATTSATDLLTDFNVSQDRIDLANLGFTGLGSGKNGTLNISYNATLDRTYVKSLDVD 505
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+ G+ +L L G +K+ ++ + + + G T+ + + G++G D + G
Sbjct: 506 ASGN-RFELGLTGNLKDTLNASHFIFQRVTEGTAGGDTLTGTAGNDVINGNAGVDRIDGG 564
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA----IIVYDANEHKQDFLS 339
+ + + D G +G D F Y + Y+ Y I + LS
Sbjct: 565 AGADTINGGADADTLTGGAGADVFVYSSRLDSYRNYTAGGPKQSDTIFDFNVAEDRIDLS 624
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ D +++ + T + + G +++ L F
Sbjct: 625 AIGLRGLGDGSANTLYLSLNGDGSKTYVKTNAVDTTGNRFEIALEGNLLDKLGASN-FIF 683
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA-- 457
S L + + + AL Y A+ D
Sbjct: 684 SSASATNQAPVLNTPLMDQIVTELKPFSYTVQPGSFSDPDSTALTYSATLADNSALPDWL 743
Query: 458 --DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
D+ L G + G D+ + NV G T
Sbjct: 744 KFDSKTLTFSGTPGGTASGLYSVLLTASDATGASVADSFAINVGNVAPGIIT---GTESA 800
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
+ + L + + L AG+D + +G + + ++
Sbjct: 801 EALYGTEGNDTLLGLGGDDTLRGDTGADVLNGGAGRD--ALYGGADADTFVYST 852
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/292 (15%), Positives = 91/292 (31%), Gaps = 16/292 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + + ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDAFPLVTVLG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I E + G +G D + G + +++ +G D G +G DTF + +
Sbjct: 387 TEANDVITGGAAHELIFGLAGKDTLDGGTGDDILVGGAGADKLSGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ ++ D + L+++ ++N+ + L+ T +
Sbjct: 447 YRTATTSATDLLTDFNVSQDRIDLANLGFTGLGSGKNGTLNISYNATLDRTYVKSLDVDA 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ I D L G+D GV
Sbjct: 507 SGNRFELGLTGNLKDTLNASHFIFQRVTEGTAGGDTLTGTAGNDVIN-----GNAGVDRI 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF--GCEEGRFVTFD 484
+ A + L + D + N+ G + FD
Sbjct: 562 DGGAGADTINGGADADTLTGGAGADVFVYSSRLDSYRNYTAGGPKQSDTIFD 613
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 49/149 (32%), Gaps = 5/149 (3%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
+ D A+ S + K + + SG +L
Sbjct: 716 PGSFSDPDSTALTYSATLADNSALPDWLKFDSKTLTFSGTPGGTASGLYSVLLTASDATG 775
Query: 240 KNY-----IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ I++ + I G E + ++++G G+D + G++ +V +G
Sbjct: 776 ASVADSFAINVGNVAPGIITGTESAEALYGTEGNDTLLGLGGDDTLRGDTGADVLNGGAG 835
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
D G + DTF Y + Y+ Y
Sbjct: 836 RDALYGGADADTFVYSTLTDSYRDYDASG 864
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 59/177 (33%), Gaps = 17/177 (9%)
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
D+ Y +D V + +D + A+ + + I + N
Sbjct: 1344 SDSYYVDDVADRVVETNSDAWVGGVDTVYSALASYTLGAHLENIAITRTDTANATGNA-- 1401
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN--------- 259
++ + G+D L + LNT + + GG +
Sbjct: 1402 LDNVLYAGAGDNVMDGRDGNDTASY-LFASAGVTVALNTSAQQATGGSGLDTLKGTENLT 1460
Query: 260 -----MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ + + G +GND + G + ++V SSG D G +G D + + +
Sbjct: 1461 GSQFADSLTGNKNANVLNGGAGNDTLSGGAGDDVLIGSSGADTLIGGTGADRYVFNS 1517
Score = 37.8 bits (86), Expect = 6.3, Method: Composition-based stats.
Identities = 58/438 (13%), Positives = 113/438 (25%), Gaps = 15/438 (3%)
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
H GL + V+ + Y ND +V++ + ++G +T +V
Sbjct: 168 HGNGLDGFVADYLSDSVFENNVAYNNDRHGFNVVTSTHDFTLSNNIAYGNGSTGIVVQRG 227
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ A G +Y + + SG LD+ G I ++
Sbjct: 228 SENIPSPANITITGGAVYGNGAEGVLIKLSSQVSVSG----LDIHGNGSAGVRIYGSSGV 283
Query: 250 WSSIGGYEKNMTIAQ--HTVIESVVGSSGNDVVIGNSANNVFFES--SGNDVFDGS---S 302
N A +I+S ++G N ++N+ + +G+D
Sbjct: 284 DVFDNTLSNNSLGAPVPEIIIQSYDDTTGVSGKYFNGSDNLIRGNLITGSDNSTYGVAER 343
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
D + + + +VY D V L + ++
Sbjct: 344 NEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVL-GTEANDVITGGAAHELI 402
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-FDSYLYLGSYDDLRNVFGSDRGA 421
A + L G D+ + G D FD
Sbjct: 403 FGLAGKDTLDGGTGDDILVGGAGADKLSGGAGADTFRFDQLTDSYRTATTSATDLLTDFN 462
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
++ I + K S+ ++ V + F +
Sbjct: 463 VSQDRIDLANLGFTGLGSGKNGTLNISYNATLDRTYVKSLDVDASGNRFELGLTGNLKDT 522
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYIT--HGVKEGRNPDAFKALEYIASHEDLINA 539
S+ + + G A I GV + A + L
Sbjct: 523 LNASHFIFQRVTEGTAGGDTLTGTAGNDVINGNAGVDRIDGGAGADTINGGADADTLTGG 582
Query: 540 FADAPDLVQAGKDHFSNF 557
+ + D + N+
Sbjct: 583 AGADVFVYSSRLDSYRNY 600
>gi|158341024|ref|YP_001522191.1| hypothetical protein AM1_E0108 [Acaryochloris marina MBIC11017]
gi|158311265|gb|ABW32877.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 1859
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/331 (15%), Positives = 95/331 (28%), Gaps = 19/331 (5%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE 72
L + + F D ++ I LN + ++ + + D
Sbjct: 1482 AIQELGLGESLTETFSVTSLDGTGAGTVTITINGLNELLEGTSQADFLLGTGLAD----- 1536
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T G D + D+ G G ++ N L +
Sbjct: 1537 TINGRGGNDTLIGRGDNDILNGDGGRDTLEGRNGDDILNGGSGADSLNGGNGLDTLNGGN 1596
Query: 133 GLMHPGSYNG--------GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
G N G Y D + D + + + S+++ G AT
Sbjct: 1597 GRDTLDGGNNSDILDGGNGADTYLWDAGDDRDIYQDTGTTGTDRITSLVENFNGLTATFD 1656
Query: 185 VSDIVAVQKIYG--APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+ + V G A + + + TI GGDD + +
Sbjct: 1657 ATSGIEVINREGDLAFNIRGAGTVGETWDFTDINLTNATIQGRGGDDNITGSNR----AD 1712
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I ++ G N ++ + + G G D ++G S + +GND+ G+
Sbjct: 1713 IIEGNRGNDTLNGGSGNDSLLGGGNDDVLTGGDGRDTLVGGSGADSLNGGAGNDLLQGNG 1772
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G DTF + + F D +
Sbjct: 1773 GDDTFIFAGDFGRDTVVDFNGNADQIDLSSF 1803
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/273 (13%), Positives = 78/273 (28%), Gaps = 7/273 (2%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
TI GDD +D T+ G + + ++I G + N I
Sbjct: 360 GNNTIDGGDGNDTIESGAGDDTIDAGDGNDTIESGAGDDTIDAGDGNNTIDGGDGNNNIE 419
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + +G+D++ + N+ GND + + L + E
Sbjct: 420 SGAGDDIISSGAGDDIITSSGGNDTIDAGEGNDTVNAGLASGIADGGEGTDLLVVDFSEL 479
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ + ++ S+ + + D Q + AS + L G D +
Sbjct: 480 NVGITMSSSFITAGSSNFNFVHVNFENFDITGTNQADSINGDASADTLNGGDGDDTLDGF 539
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH--GVKEGRNPDAFK 441
G D+ ++ + + S I + ++
Sbjct: 540 GGNDVIDGGAGDDLLIEADFSSTTDALNIDDTSSKTINTGGLSIANIETIENLLTGSGDD 599
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
+ Y+ + I+ A + D G
Sbjct: 600 TINYVNFRDYSIDTGAGDDVINTGAGDDVIRAG 632
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 49/383 (12%), Positives = 104/383 (27%), Gaps = 23/383 (6%)
Query: 60 GEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
G + + ++ F +S + +N + + I D G TI
Sbjct: 307 GSFQEFINTEFYSSSEFENFDITGTN--LNDSLIGGTNADTLIGGGGDDTIVGSDGNNTI 364
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
+ I G + +G + D D+ + ++ +++ G
Sbjct: 365 DGGDGNDTIESGAGDDTIDAGDGNDTIESGAGDDTIDAGDGNNTIDGGDGNNNIESGAGD 424
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT----- 234
+ + G G + G DLL +
Sbjct: 425 DIISSGAGDDIITSSGGNDTIDAG----EGNDTVNAGLASGIADGGEGTDLLVVDFSELN 480
Query: 235 -LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
I ++I + +++ + +N I +S+ G + D + G ++
Sbjct: 481 VGITMSSSFITAGSSNFNFVHVNFENFDITGTNQADSINGDASADTLNGGDGDDTLDGFG 540
Query: 294 GNDVFDGSSGLDTFF-YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI- 351
GNDV DG +G D S + + + + + +E L
Sbjct: 541 GNDVIDGGAGDDLLIEADFSSTTDALNIDDTSSKTINTGGLSIANIETIENLLTGSGDDT 600
Query: 352 ---------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
++ A + + G D + EG D+ +
Sbjct: 601 INYVNFRDYSIDTGAGDDVINTGAGDDVIRAGEGNDTVNAGLGSGTADGGEGTDLLIADF 660
Query: 403 LYLGSYDDLRNVFGSDRGAAARH 425
L + + F + H
Sbjct: 661 SELNVGITMSSSFITGGNTTFVH 683
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 31/86 (36%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + + ++++G G+D + G + N+ +G D DG SG DT
Sbjct: 176 IIGGPGDEVLNGSNGDDTILGGGGDDTINGGAGNDSIDGGTGIDSIDGGSGNDTIVGGGS 235
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL 338
+ + + D L
Sbjct: 236 GFGFGDSINNPIPTDSVNGDEGTDLL 261
Score = 43.2 bits (100), Expect = 0.12, Method: Composition-based stats.
Identities = 63/484 (13%), Positives = 111/484 (22%), Gaps = 65/484 (13%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D SN V Y + N+ +D + Y I G + A I
Sbjct: 1357 DSVTTPSNGTLVDNNDGTYTYTPDANYTGSDAFTYTISDGNGGTDTATVNIT-------V 1409
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
GS N V D ++ + + D + + YG
Sbjct: 1410 GSTNDIATVTDDSGSVTEDDDPNTLTTSGQVIVTDSDPGEAFATA------ETLIGTYGT 1463
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + + + + +T S G
Sbjct: 1464 FTVDA-DGFWNYTADNTQAAIQELGLGESLTETFSVT----------------SLDGTGA 1506
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+TI + + E + G+S D ++G + GND G D
Sbjct: 1507 GTVTITINGLNELLEGTSQADFLLGTGLADTINGRGGNDTLIGRGDNDIL---------- 1556
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ +D L + L + L G+
Sbjct: 1557 ------------NGDGGRDTLEG------RNGDDILNGGSGADSLNGGNGLDTLNGGNGR 1598
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D + + G D G D+ G+ + +
Sbjct: 1599 DTLDGGNNSDILDGGNGADTYL---WDAGDDRDIYQDTGTTGTDRITSLVENFNGLTATF 1655
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
DA +E I DL A + + N + D + + D+
Sbjct: 1656 DATSGIEVINREGDLAFNIRGAGTVGETWDFTDINLTNATIQGRGGDDNITGSNRADIIE 1715
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+ G L + L+ AG D
Sbjct: 1716 GNRGNDTLN----GGSGNDSLLGGGNDDVLTGGDGRDTLVGGSGADSLNGGAGNDLLQGN 1771
Query: 558 GYEE 561
G ++
Sbjct: 1772 GGDD 1775
Score = 39.4 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 43/331 (12%), Positives = 78/331 (23%), Gaps = 66/331 (19%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
I +I G+D + G + I+ + S G ++ IA ++
Sbjct: 208 GNDSIDGGTGIDSIDGGSGNDTIVGGGSGFGFGDSINNPIPTDSVNGDEGTDLLIADYSQ 267
Query: 268 IESVV--------------------GSSGNDVV--------------------------- 280
+ +SG+ +
Sbjct: 268 GVRAIFLTNLLGVPTEVLVEFGVNVTTSGSSALIQDDPPGSFQEFINTEFYSSSEFENFD 327
Query: 281 -IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
G + N+ + D G G DT I + +
Sbjct: 328 ITGTNLNDSLIGGTNADTLIGGGGDDTIV--GSDGNNTIDGGDGNDTIESGAGDDT---- 381
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ D + ++ + G + ES G DI
Sbjct: 382 ----IDAGDGNDTIESGAGDDTIDAGDGNNTIDGGDGNNNIESGAGDDIISSGAGDDIIT 437
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK---ALEYIASHEDLINAF 456
S G D + G+D A EG + I I A
Sbjct: 438 SS----GGNDTIDAGEGNDTVNAGLASGIADGGEGTDLLVVDFSELNVGITMSSSFITAG 493
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
+ + V V ++F G + + D+
Sbjct: 494 SSNFNFVHVNFENFDITGTNQADSINGDASA 524
>gi|126727382|ref|ZP_01743217.1| 5'-nucleotidase [Rhodobacterales bacterium HTCC2150]
gi|126703377|gb|EBA02475.1| 5'-nucleotidase [Rhodobacterales bacterium HTCC2150]
Length = 622
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 7/144 (4%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ ++ + G+D+L+ GG + I G + I+
Sbjct: 416 VEGGNDVLNGGSGNDEMHGNAGNDILN----GGTGEDELFGDQGNDKINGGTDDDWISGG 471
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G SGNDV+ GN + +G+D G +G+D I
Sbjct: 472 QGNDKLRGQSGNDVISGNDGKDYLNGGAGDDNLMGGAGVDKIV--GGKGADVIEGGTGND 529
Query: 326 IVYDANEHKQDFLSDVERLRFADQ 349
++ + D SD F D
Sbjct: 530 HLW-GGKWTADGSSDTFIFNFGDG 552
Score = 60.6 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/259 (13%), Positives = 73/259 (28%), Gaps = 4/259 (1%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN Y + D + + ++D ++ + S+ G + +
Sbjct: 336 GNLYYGLNKGDHDLDPSTSTEGAIFKVIMDWDAGQAFSEFMSEAPTTGSNDGAVDPTSSD 395
Query: 263 AQHTVIESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
A + + V + +++ N+V SGND G++G D + +++
Sbjct: 396 AFAEIDANAPVLINQPELIKVEGGNDVLNGGSGNDEMHGNAGNDIL--NGGTGEDELFGD 453
Query: 322 ENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ + + ++LR + L A ++L+ G D
Sbjct: 454 QGNDKINGGTDDDWISGGQGNDKLRGQSGNDVISGNDGKDYLNGGAGDDNLMGGAGVDKI 513
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
K G D + D D + T + A
Sbjct: 514 VGGKGADVIEGGTGNDHLWGGKWTADGSSDTFIFNFGDGKDYIHDFETEFDVIDLSGLAT 573
Query: 441 KALEYIASHEDLINAFADA 459
E + DL A
Sbjct: 574 SIEELNSVTTDLGWATVID 592
>gi|259155266|ref|NP_001158874.1| Matrix metalloproteinase-25 [Salmo salar]
gi|223647796|gb|ACN10656.1| Matrix metalloproteinase-25 precursor [Salmo salar]
Length = 584
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 68/217 (31%), Gaps = 55/217 (25%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVA-RWALGEWSKVVDLTFEETS-- 74
L W + + S + +P+ E A WS V L+F + S
Sbjct: 117 LSGLRWDRTDLTWSVHSYPN--PSRSTSVFHPDMVEGILTLAFKAWSDVTPLSFRQLSGS 174
Query: 75 ------IHSDIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYG 113
DI+ + P + +FD + W YG
Sbjct: 175 DREDKGPGGDIRVSFTRSLHDDGYPFDGRGGTLAHAFFP-GRDDVAGDTHFDDDEYWSYG 233
Query: 114 IGKGTI-LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
+I L A+HE GHALGL H S Y + + SY +P
Sbjct: 234 GDSSSIDLFTVAVHEFGHALGLSHSSSDPSIMRPYYQGAVED-------ISSYNLP---- 282
Query: 173 MDASFGYCATPMVSDIVAVQKIYG----APKGSLGNN 205
+ D +A+Q++YG P G++
Sbjct: 283 ------------LDDRMAIQELYGRKKSKPTVHHGDS 307
>gi|148683757|gb|EDL15704.1| matrix metallopeptidase 28 (epilysin), isoform CRA_a [Mus musculus]
Length = 470
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 49/153 (32%), Gaps = 19/153 (12%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHA 208
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVY---GVD 150
E +FD + W +G L HEIGH LGL H P P Y G D
Sbjct: 209 FLPRRGEAHFDGDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRD 268
Query: 151 NDYENDSFLTSVMSYFMPQDSMM-DASFGYCAT 182
D L Y + S+ + T
Sbjct: 269 ALLSWDDVLAVQSLYDGQWRLYVFKGSYFWEVT 301
>gi|317154589|ref|YP_004122637.1| FG-GAP repeat-containing protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944840|gb|ADU63891.1| FG-GAP repeat protein [Desulfovibrio aespoeensis Aspo-2]
Length = 594
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 55/185 (29%), Gaps = 18/185 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
T+ G D L + L+GG N + + G + +
Sbjct: 395 GNDWLDGQDGNDTLVGGSGHDWLLGGNGNDLLLGGDGNDLLFGDAGSDQLYGGNGDDILF 454
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS-YLYKIYRFE 322
++++G +G D++ G + ++V G+D+ G G DTF Y +P I F
Sbjct: 455 GGNGNDTLLGGNGGDILFGGNGDDVLCGGLGHDILVGGKGSDTFHYSSPDEGGDLITGFT 514
Query: 323 NAIIV-----------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
V + E + A E L
Sbjct: 515 QGEDVLQFAFGSKSLHTVHEPYGGTLAGAGESFVWE-TTDPGSGKLYYDPDTSLAGDEIL 573
Query: 372 IQVIG 376
I IG
Sbjct: 574 IAEIG 578
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 47/203 (23%), Gaps = 8/203 (3%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF--- 399
R+ + + L+ + L+ G D +G D+ F
Sbjct: 380 RITGDARANTILGGNGNDWLDGQDGNDTLVGGSGHDWLLGGNGNDLLLGGDGNDLLFGDA 439
Query: 400 -DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
LY G+ DD+ + +G + L H+ L+
Sbjct: 440 GSDQLYGGNGDDILFGGNGNDTLL----GGNGGDILFGGNGDDVLCGGLGHDILVGGKGS 495
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
+ S + +G A ++ G
Sbjct: 496 DTFHYSSPDEGGDLITGFTQGEDVLQFAFGSKSLHTVHEPYGGTLAGAGESFVWETTDPG 555
Query: 519 RNPDAFKALEYIASHEDLINAFA 541
+ +A E LI
Sbjct: 556 SGKLYYDPDTSLAGDEILIAEIG 578
>gi|148227598|ref|NP_001088503.1| matrix metallopeptidase 8 (neutrophil collagenase) [Xenopus laevis]
gi|54311407|gb|AAH84836.1| LOC495372 protein [Xenopus laevis]
Length = 466
Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 63/224 (28%), Gaps = 55/224 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T ++ + A WS V LTF + +DI+
Sbjct: 108 WKKKDLTYRILNYTPDMTREEVD-------RAIQKAFKVWSDVTPLTFTRVNDGVADIEI 160
Query: 82 IS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ P + + +FD+ + W G G L A H
Sbjct: 161 SFAAQVHNDFYPFDGPYGTLAHAFAPGNN--IGGDAHFDEDEDWTSG-SVGFNLFLVAAH 217
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV- 185
E GH+LGL H S + Y + +T +
Sbjct: 218 EFGHSLGLFHSNDP--------------------SALMY-------PTYHYVDPSTFQLP 250
Query: 186 -SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
D+ +Q +YGA + + I G+
Sbjct: 251 QDDVNGIQSLYGARTKPAEPSTPSNPTNCPPNITFDAITTLRGE 294
>gi|148230386|ref|NP_001088423.1| matrix metalloproteinase-18 precursor [Xenopus laevis]
gi|125858527|gb|AAI29520.1| Mmp18 protein [Xenopus laevis]
Length = 467
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 54/201 (26%), Gaps = 49/201 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPN-----AQEVARWALGEWSKVVDLTFE---- 71
Y K L++ I P+ + + A WS V LTF
Sbjct: 95 YDVGQYSTVAKSSAWQKKDLTYRILNFTPDLPQADVETAIQRAFKVWSDVTPLTFTRIYN 154
Query: 72 -----ETSIHSDIK-----FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
E S + F S + + + +FD+ + W L
Sbjct: 155 EVSDIEISFTAGDHKDNSPFDGSGGILAHAFQPGNGIGGDAHFDEDETWTKTSEIYN-LF 213
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH+LGL H + D
Sbjct: 214 LVAAHEFGHSLGLSHSTDQGALMYPTYSNTD---------------------------PK 246
Query: 182 TPMV--SDIVAVQKIYGAPKG 200
T + DI A+Q +YG
Sbjct: 247 TFQLPQDDINAIQYLYGKSSN 267
>gi|157820645|ref|NP_001100629.1| matrix metalloproteinase-19 [Rattus norvegicus]
gi|149029634|gb|EDL84805.1| matrix metalloproteinase 19 (predicted) [Rattus norvegicus]
gi|225422918|gb|ACN90949.1| matrix metalloproteinase 19 [Rattus norvegicus]
Length = 517
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 55/179 (30%), Gaps = 43/179 (24%)
Query: 35 LTTHRLSFDI----TELNPNAQEVA-RWALGEWSKVVDLTFEETSIH-SDIKFISSNNGY 88
L+F I + L+P+ A A WS V LTF E +DI+
Sbjct: 105 WRKKHLTFRILNVPSTLSPSRVRAALHQAFKYWSNVAPLTFREVKAGWADIRLSFHGRQS 164
Query: 89 VCTPRYDSRYF-----------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
++FD + W G +G L A HE+GHALGL H
Sbjct: 165 PYCSNSFDGPGKVLAHADVPELGSVHFDNDEFWTEGTYQGVNLRIIAAHEVGHALGLGH- 223
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
Y + + A + D+ +Q +YG
Sbjct: 224 -------------------------SRYTQALMAPVYAGYQPYFRLHPDDVAGIQALYG 257
>gi|12585266|sp|O13065|MMP18_XENLA RecName: Full=Matrix metalloproteinase-18; Short=MMP-18; AltName:
Full=Collagenase-4; Short=xCol4; Flags: Precursor
gi|2055321|gb|AAB53148.1| collagenase 4 precursor [Xenopus laevis]
Length = 467
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 54/201 (26%), Gaps = 49/201 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPN-----AQEVARWALGEWSKVVDLTFE---- 71
Y K L++ I P+ + + A WS V LTF
Sbjct: 95 YDVGQYSTVAKSSAWQKKDLTYRILNFTPDLPQADVETAIQRAFKVWSDVTPLTFTRIYN 154
Query: 72 -----ETSIHSDIK-----FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
E S + F S + + + +FD+ + W L
Sbjct: 155 EVSDIEISFTAGDHKDNSPFDGSGGILAHAFQPGNGIGGDAHFDEDETWTKTSEIYN-LF 213
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH+LGL H + D
Sbjct: 214 LVAAHEFGHSLGLSHSTDQGALMYPTYSNTD---------------------------PK 246
Query: 182 TPMV--SDIVAVQKIYGAPKG 200
T + DI A+Q +YG
Sbjct: 247 TFQLPQDDINAIQYLYGKSSN 267
>gi|302875208|ref|YP_003843841.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578065|gb|ADL52077.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 914
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 50/416 (12%), Positives = 114/416 (27%), Gaps = 16/416 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ N T + D+ + G T+ + G
Sbjct: 59 YGGNGDDTIVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEKGT 118
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF------------MPQDSMMDASFGYCAT 182
G D ++ S + A
Sbjct: 119 DTLTGGAGSDTYVFRKGDGQDIIVDYSGEANTIIDTLKFEDIDASEVSLNCTGYDLIIAV 178
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+D V +Q + A + N +K + ++ + G + D +L
Sbjct: 179 NGTTDSVRIQNYFTADLYKIENIQFKDGTTWDINTIRNSVVYANGTEEKD-SLYAAGPVT 237
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
++ ++ N I I++++ +GND + G N++ + G+D+ +G
Sbjct: 238 MN-GYGGDDTLRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGNDILYGRVGDDLLEGGL 296
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT + A +Y + + + D + + + ++
Sbjct: 297 GNDTLYGEAGQDIYVFRKGDGQDTINDTAGENNTIIDTLRFEDIDSTEVTLNKSAYDLVI 356
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
S + + + + EF DI Y+ N + +
Sbjct: 357 TVNGSSDSVRILSYFYSNDYKVEKIEFQDGVVLDINAIMKGYVYINGTNSNEQLNGYCSG 416
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+I + + G + + L A ++ + D + G D ++
Sbjct: 417 ENEFIGNVIINGFDGN--DTLNGSAGNDKVYGGNGDDTIVGNNGDDTLEGGAGKDT 470
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 54/406 (13%), Positives = 121/406 (29%), Gaps = 7/406 (1%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
++ T R + + + D IG + + G
Sbjct: 455 GNNGDDTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEKGNDTLTGGAGSD 514
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA---VQ 192
G VD E ++ + ++ + + GY V+D +Q
Sbjct: 515 TYVFRKGDGQDIIVDYSGEANTIIDTLKFEDIAASEVSLNCTGYDLIIAVNDSTDSVRIQ 574
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ A + N +K + +I + G + D +L ++ +
Sbjct: 575 NYFTADLYKIENIQFKDGTTWDINTIRNSIVYANGTEEKD-SLYAAGPVTMN-GYGGDDT 632
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N I I++++ +GND + G N++ + G+D+ +G G DT + A
Sbjct: 633 LRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGNDILYGRVGDDLLEGGLGNDTLYGEAG 692
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+Y + + + D + + + ++ S + +
Sbjct: 693 QDIYVFRKGDGQDTINDTAGENNTIIDTLRFEDIDSTEVTLNKSAYDLVITVNGSSDSVR 752
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+ + EF DI Y+ N S + +I + +
Sbjct: 753 ILSYFYSNDYKVEKIEFQDGVVLDINAIMKGYVYINGTNSNEQISGYCSGENEFIGNVII 812
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
G + + L A ++ + D + G D ++
Sbjct: 813 NGFDGN--DTLNGSAGNDKVYGGNGDDTIVGNNGDDTLEGGAGKDT 856
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/295 (16%), Positives = 96/295 (32%), Gaps = 15/295 (5%)
Query: 184 MVSDIVAVQKIY-GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
MV DI A+ K Y + I + + I G+D L+ +
Sbjct: 1 MVLDINAIMKGYVYINGTNSNEQISGYCSGENEFIGNVIINGFDGNDTLNGSAGNDKV-- 58
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+I G + T+ +++ GS+G D++ G S ++ G+D+ DG
Sbjct: 59 --YGGNGDDTIVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEK 116
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DT A S Y + + I+ D + ++ L+F D V++
Sbjct: 117 GTDTLTGGAGSDTYVFRKGDGQDIIVDYSGEANTI---IDTLKFEDIDASEVSLNCT--- 170
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
Y+ +I V G +++++ L + +I F +V ++
Sbjct: 171 ----GYDLIIAVNGTTDSVRIQNYFTADLYKIENIQFKDGTTWDINTIRNSVVYANGTEE 226
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
G L +++ + + G D +
Sbjct: 227 KDSLYAAGPVTMNGYGGDDTLRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGND 281
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/317 (14%), Positives = 76/317 (23%), Gaps = 27/317 (8%)
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
I+ + + I G N I+ + E+ GN ++ G N+ S+GND G
Sbjct: 4 DINAIMKGYVYINGTNSNEQISGYCSGEN--EFIGNVIINGFDGNDTLNGSAGNDKVYGG 61
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G DT N +D L + +
Sbjct: 62 NGDDTIV-------------GNNGDDTLEGGAGKDTLRG------SAGKDILKGGSEDDT 102
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGL--SEGRDITFDSYLYLGSYDDLRNVFGSDR 419
L + L G D + +G+DI D + D D
Sbjct: 103 LNGEIGDDILDGEKGTDTLTGGAGSDTYVFRKGDGQDIIVDYSGEANTIIDTLKFEDIDA 162
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
+ + + + N DL +
Sbjct: 163 SEVSLNCTGYDLIIAVNGTTDSVRIQNYFTADLYKIENIQFKDGTTWDINTIRNSVVYAN 222
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDR----GAAARHYITHGVKEGRNPDAFKALEYIASHED 535
LY + G D A + Y G+ +L ++
Sbjct: 223 GTEEKDSLYAAGPVTMNGYGGDDTLRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGNDI 282
Query: 536 LINAFADAPDLVQAGKD 552
L D G D
Sbjct: 283 LYGRVGDDLLEGGLGND 299
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 44/317 (13%), Positives = 79/317 (24%), Gaps = 28/317 (8%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ G T R ++ D G G ++ + +G
Sbjct: 622 VTMNGYGGDDTLRTENANDKIYGGAGIDTIIAGAGNDSLYGEVGNDILYGRVG------D 675
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
+ G D Y V QD++ D + +
Sbjct: 676 DLLEGGLGNDTLYGEAGQDIYVFRKGDGQDTINDTAGENNTIIDTLRFEDIDSTEVTLNK 735
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
S + + + + Y + + GV I+ + + I G N
Sbjct: 736 SAYDLVITVNGSSDSVRILSYFYSNDYKVE-KIEFQDGVVLDINAIMKGYVYINGTNSNE 794
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I+ + E+ GN ++ G N+ S+GND G +G DT
Sbjct: 795 QISGYCSGEN--EFIGNVIINGFDGNDTLNGSAGNDKVYGGNGDDTIV------------ 840
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
N +D L + + L + L G D
Sbjct: 841 -GNNGDDTLEGGAGKDTLRG------SAGKDILKGGSEDDTLNGEIGDDILDGEKGTDTL 893
Query: 381 ESMKHFYEFGLSEGRDI 397
+ + R
Sbjct: 894 TGGAGSDTYVFRKRRRT 910
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/252 (14%), Positives = 69/252 (27%), Gaps = 18/252 (7%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS--HNALHEIGHALG 133
+ D G+ + + I G
Sbjct: 653 AGAGNDSLYGEVGNDILYGRVGDDLLEGGLGNDTLYGEAGQDIYVFRKGDGQDTINDTAG 712
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP---------- 183
+ + N S V++ DS+ S+ Y
Sbjct: 713 ENNTIIDTLRFEDIDSTEVTLNKSAYDLVITVNGSSDSVRILSYFYSNDYKVEKIEFQDG 772
Query: 184 MVSDIVAVQKIY-GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-----IG 237
+V DI A+ K Y + I + + I G+D L+ + G
Sbjct: 773 VVLDINAIMKGYVYINGTNSNEQISGYCSGENEFIGNVIINGFDGNDTLNGSAGNDKVYG 832
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G + + ++ G T+ + + G S +D + G +++ G D
Sbjct: 833 GNGDDTIVGNNGDDTLEGGAGKDTLRGSAGKDILKGGSEDDTLNGEIGDDILDGEKGTDT 892
Query: 298 FDGSSGLDTFFY 309
G +G DT+ +
Sbjct: 893 LTGGAGSDTYVF 904
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 16/108 (14%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF- 307
I G++ N T+ + V G +G+D ++GN+ ++ +G D GS+G D
Sbjct: 422 GNVIINGFDGNDTLNGSAGNDKVYGGNGDDTIVGNNGDDTLEGGAGKDTLRGSAGKDILK 481
Query: 308 ---------------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + QD + D
Sbjct: 482 GGSEDDTLNGEIGDDILDGEKGNDTLTGGAGSDTYVFRKGDGQDIIVD 529
>gi|172037004|ref|YP_001803505.1| hypothetical protein cce_2089 [Cyanothece sp. ATCC 51142]
gi|171698458|gb|ACB51439.1| hypothetical protein cce_2089 [Cyanothece sp. ATCC 51142]
Length = 1687
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 1/125 (0%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIG-GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ +P +I D+ + T+ I G + I + + +
Sbjct: 1521 ETTPVANSISDNSQISETPKSSYDLATGVTTIAGTKGDDIIEGTSGDDLIDGNAGNDILT 1580
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS+GND + G + N+V +GNDV +G SG D F + A +I FE+ + N
Sbjct: 1581 GSTGNDTLSGGTGNDVLTGGAGNDVLNGGSGGDIFNFSANEGRDRIEDFESGDKIRLQNI 1640
Query: 333 HKQDF 337
Q
Sbjct: 1641 DSQSL 1645
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 27/105 (25%), Gaps = 5/105 (4%)
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + + + D + V + +++ A + L G D
Sbjct: 1530 SDNSQISETPKSSYDLATGVTTIAGTKGDDIIEGTSGDDLIDGNAGNDILTGSTGNDTLS 1589
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
G D+ GS D+ N ++ +
Sbjct: 1590 GGTGNDVLTGGAGNDVLNG-----GSGGDIFNFSANEGRDRIEDF 1629
>gi|126659167|ref|ZP_01730306.1| outer membrane secretion protein [Cyanothece sp. CCY0110]
gi|126619574|gb|EAZ90304.1| outer membrane secretion protein [Cyanothece sp. CCY0110]
Length = 532
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 60/461 (13%), Positives = 116/461 (25%), Gaps = 62/461 (13%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD------- 299
S +I G E N TI E + G GND + N + + GNDV
Sbjct: 29 PTSLPTIIGTEGNDTIPGTIFDEIIYGRGGNDTIYSNGGVDEIYGEEGNDVIYTQFGYAN 88
Query: 300 GSSGLDTFFYYAPSYLYKIYRFE---NAIIVYDANEHKQDFLSDVERLRFADQCIDSV-- 354
G SG+DT +Y I + IV + + + ER D +
Sbjct: 89 GGSGIDTLVADYTNYHTGIQLTHRSFVSDIVTRSGAVEVLTGLNFERFNITGTQFDDILN 148
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG-------------------- 394
I+ A + + D + + G
Sbjct: 149 GRGDTDIINGGAGNDIISNGSYLDPVPNGGGYDILDGGIGYDRLSLYFAFVNTDVTLNLT 208
Query: 395 --------------RDITFDSYLYLGSYDDLRNVFGSDRGAAARHY----ITHGVKEGRN 436
R+ ++LGS +D G++ ++ +K
Sbjct: 209 VQNFQLQSNTTAQVRNFEELDTIWLGSGNDTIIANGANTSGVIKNIRTGAGNDTIKLFFT 268
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ F S + + N T + Y+++
Sbjct: 269 NNIFDREVDGESGNNTLILDYSNATHGNFVNGSGINMPNNSSVIQTLSGSQIILRYNNIA 328
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD---- 552
+ G L A ++ L + G D
Sbjct: 329 QFNVIGTSFNDNLFGKSGNDTLAGGAGNDTLNGAAGNDILTGDAGNDILNGGTGNDILNG 388
Query: 553 ---HFSNFGYEEGRSITFNP-DLYLTSYDDLWNVFGSDRSAAAQ-HYITHGMKEGRALGI 607
+ + G ++ F + D F + + L +
Sbjct: 389 GAGNDTLTGGAGNDNLIFGGFSGFGDVGIDTITDFTKGSDRLLLSQKTFNQLTRNGDLTL 448
Query: 608 SGMQFK---SVMNLSEKSRDKADLSLSFDHKKVDLYTDYFG 645
+F S ++ ++ + ++ +L+ + G
Sbjct: 449 KAHEFATINSSSSVEASLAGSSNALIVYNTTTGNLFYNADG 489
Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ T ++ G N T+A +++ G++GND++ G++ N++ +GND+ +G +G
Sbjct: 333 IGTSFNDNLFGKSGNDTLAGGAGNDTLNGAAGNDILTGDAGNDILNGGTGNDILNGGAGN 392
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
DT A + F V + DF +RL + + + + L
Sbjct: 393 DTLTGGAGNDNLIFGGFSGFGDV--GIDTITDFTKGSDRLLLSQKTFNQLTRNGDLTL 448
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 51/417 (12%), Positives = 99/417 (23%), Gaps = 71/417 (17%)
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
P + I + D I I I G+ G +Y
Sbjct: 26 PDEPTSLPTIIGTEGNDTIPGTIFDEIIYGRGGNDTIYSNGGVDEIYGEEGNDVIYTQFG 85
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
S + ++++ + + + + + +V+ AV+ + G + +
Sbjct: 86 YANGGSGIDTLVADYTNYHTGIQLTHRSFVSDIVTRSGAVEVLTGLNFERFNITGTQFDD 145
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK------------- 258
I G+D++ N + + G
Sbjct: 146 ILNGRGDTDIINGGAGNDIISNGSYLDPVP----NGGGYDILDGGIGYDRLSLYFAFVNT 201
Query: 259 ---------NMTIAQHTVI--------ESVVGSSGNDVVIGNSANN-----VFFESSGND 296
N + +T +++ SGND +I N AN +GND
Sbjct: 202 DVTLNLTVQNFQLQSNTTAQVRNFEELDTIWLGSGNDTIIANGANTSGVIKNIRTGAGND 261
Query: 297 VF-------------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
DG SG +T + + + + I + + + Q
Sbjct: 262 TIKLFFTNNIFDREVDGESGNNTLILDYSNATHGNFVNGSGINMPNNSSVIQTLSGSQII 321
Query: 344 LRFAD-------------------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
LR+ + L A + L G D+
Sbjct: 322 LRYNNIAQFNVIGTSFNDNLFGKSGNDTLAGGAGNDTLNGAAGNDILTGDAGNDILNGGT 381
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
G D + FG + + + F
Sbjct: 382 GNDILNGGAGNDTLTGGAGNDNLIFGGFSGFGDVGIDTITDFTKGSDRLLLSQKTFN 438
>gi|296216051|ref|XP_002754398.1| PREDICTED: macrophage metalloelastase [Callithrix jacchus]
Length = 469
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 60/191 (31%), Gaps = 47/191 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W ++I Y T D+ V + A WS V L F +T+ +DI
Sbjct: 109 WKKHYITYSIQNYTPDMNRKDVDY-------VIQKAFQVWSHVTPLKFSKTNAGVADIVM 161
Query: 82 ISSNNGYVCT-------------PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
++ + + +FD+ + W KGT L A+HEI
Sbjct: 162 FFASGAHGDYNAFDGRGGVIAHAFGPGYGIGGDTHFDEDEFWTIN-SKGTNLFLVAVHEI 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GHALGL H N + Y DI
Sbjct: 221 GHALGLDHSSDPNA---------------IMFPTYKYVDVST----------FRLSADDI 255
Query: 189 VAVQKIYGAPK 199
+Q +YG PK
Sbjct: 256 RGIQSLYGRPK 266
>gi|307941953|ref|ZP_07657306.1| proprotein convertase P [Roseibium sp. TrichSKD4]
gi|307774859|gb|EFO34067.1| proprotein convertase P [Roseibium sp. TrichSKD4]
Length = 3659
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/285 (16%), Positives = 89/285 (31%), Gaps = 17/285 (5%)
Query: 42 FDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS--DIKFISSNNGYVCTPRYDSRYF 99
FD T + + ++L S +D+T + D ++ R +
Sbjct: 3331 FDGTVFSSSYLAAVGYSLQGVSDQLDMTTSRVLEGTINDDVMSQYHSSIPTEFRAGAGAD 3390
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
+ + DV GIG T+ + L G +N
Sbjct: 3391 IVNGTNADDVIFGGIGNDTLRGGAGDD-----IYLFSKGDGQDIVSDISGNNHIVLLDVT 3445
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI 219
S + +S+ T +VS+ + + + I+ E
Sbjct: 3446 DSEVEVERVGESIKLIVTNTEDTVLVSNALQLGERGLGSIRFNDGTIWGHEELLSKINEF 3505
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
Q + G KN + E+ + G N + + + G SG D
Sbjct: 3506 Q----------VSGIHYGTSKNDVYFGGENTDDVSGESGNDYLNGKDGNDYLYGGSGADR 3555
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+IG + +SG+D+ G +G DTF++ + I F+
Sbjct: 3556 IIGGEGADWLEGNSGSDLLVGGAGDDTFYFGYNFDMDTIADFQAG 3600
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/322 (16%), Positives = 94/322 (29%), Gaps = 36/322 (11%)
Query: 56 RWALGEWSKVVDLT--FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYG 113
R L + + D + E I+ + T + + + A G
Sbjct: 855 RLTLAAVNFIADPSGLHAEVDGQG-IRIELEDGSATYTVGDANGEIVTSSDKGATNLIGG 913
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
IG + + + + +LG G + D +
Sbjct: 914 IGDDVLTGDDQNNWLVGSLGSDTLHGGGGNDYLVADAADIS-----------VSQSNVQG 962
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL 233
F I+ + ++ + + I GDD++
Sbjct: 963 GTGFDVAQFVGDQGIIFNLQKSQVEMAIGTDHADILSSGSSEQSI---INGGAGDDII-- 1017
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
GG + + E +I G + I H +++ G GND++ G +V +
Sbjct: 1018 --FGGGADDVLNGEEGKDAIYGNSGDDLIRGHRGADTLEGGLGNDILQGGLGEDVLRGGA 1075
Query: 294 GNDVFDGS---------SGLDTFFYYAPSYLYKIYRFENAIIVYD----ANEHKQDFLSD 340
G D+ G G D Y Y + + + D LSD
Sbjct: 1076 GEDLLTGGQGDDHLHGGGGYDVAEYSGSYADYIVTSNLDGTYTVTDRRNGSPDGADRLSD 1135
Query: 341 VERLRFADQCIDSVNVKQRSIL 362
VE L FAD I+ V + + L
Sbjct: 1136 VEALNFAD--INEVQIDGDNPL 1155
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/379 (12%), Positives = 93/379 (24%), Gaps = 87/379 (22%)
Query: 73 TSIHSDIKFISSNNGYV-----CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
D +N+ Y S + +DV G G +
Sbjct: 2438 VGGRGDDTIRGANSRYASLDVEDVLIGGSGDDKLYGYAGSDVLDGGYGDDFLNGGAGEDR 2497
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ G D D + + + + + ++ D
Sbjct: 2498 L----------EGGEGNDRLLGDADADVII----------GGNGIDEVYYYTSNAAVIVD 2537
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ +G ++ S + T+ + +D
Sbjct: 2538 LNDALPEHGG---HAEGDVLFSIENILGSSYADTLRGDDEGNSID-------------GY 2581
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G + + +++ G +G+D++ G ++ G+D G G D +
Sbjct: 2582 YGDDLLYGLGGDDDLKGAAGNDTIYGGAGSDLIYGGYGDDYVVGGLGDDHLQGGGGHDVY 2641
Query: 308 FYYAPSYLYKIYRFENAIIVYDA------------NEHKQDFLSD--------------- 340
YY I F+ I+ + D +
Sbjct: 2642 KYYHGDGNDVISDFKGVNIIDFDNISSTEVIFDRIGYNGADLQINVGEYSDSIVVKYYFD 2701
Query: 341 -----VERLRFADQCID-----------SVNVKQRSILEY-TASYEDLIQVIGQDVF--E 381
+ FAD + V Q +L Y + G D
Sbjct: 2702 RQFSPIFSFNFADNAVLGFADLEEQFFHVVGTDQDDLLNYVLDGDYTITGGAGDDTIVTS 2761
Query: 382 SMKHFYEFGLSEGRDITFD 400
+ + + L +G DI D
Sbjct: 2762 AGDDTFVYALGDGNDIIRD 2780
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+Y E + + T+ D G D+++ + I IDL+ +WS I G + +
Sbjct: 1742 VYTGEFSDQSNGDSLTVSDGDGYDIVNTSAILEDV-IIDLSGFNWSKISGQP--VVFNEG 1798
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE+V GND++ GN NN+ F G+D+ G++G D + Y +
Sbjct: 1799 ASIETVYAGDGNDLISGNKLNNILFGGRGHDLLRGNTGDD-IIFGGNGDDIIQYTIGDGA 1857
Query: 326 IVYDANEHKQDFLSDVERLRFAD 348
V ++ + ++ L F
Sbjct: 1858 DVIESFYLGRSMAQGMDTLSFEG 1880
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 59/219 (26%), Gaps = 47/219 (21%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G D+V G +A++V F GND G +G D + + + + +
Sbjct: 3384 RAGAGADIVNGTNADDVIFGGIGNDTLRGGAGDDIYLFSKGDGQDIVSDISGNNHIVLLD 3443
Query: 332 EHKQDF------------LSDVER-----------------LRFADQCI--------DSV 354
+ +++ E +RF D I
Sbjct: 3444 VTDSEVEVERVGESIKLIVTNTEDTVLVSNALQLGERGLGSIRFNDGTIWGHEELLSKIN 3503
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ I T+ + D +G D YLY GS D +
Sbjct: 3504 EFQVSGIHYGTSKNDVYFGGENTDDVSGESGNDYLNGKDGND-----YLYGGSGAD--RI 3556
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
G + + + A Y + D+
Sbjct: 3557 IGGEGADWLEG---NSGSDLLVGGAGDDTFYFGYNFDMD 3592
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/337 (13%), Positives = 88/337 (26%), Gaps = 63/337 (18%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G+ ND + G S +++ + GND G G DT+ Y ++ +
Sbjct: 3095 IYGTDDNDYLSGTSGDDIISGAQGNDTLAGGGGNDTYIYNRGDGNDEVLDRSGQNTLILK 3154
Query: 331 NEHKQDFL-----------------------------------SDVERLRFADQCIDS-- 353
+ D S++++++FAD +
Sbjct: 3155 DIISSDVYLCGASSRNGYVIDKVTWETIYIPNAFSSSSSYYRKSNIQKIKFADGVVWDRS 3214
Query: 354 ----------VNVKQRSILEYTA-SYEDLIQVIGQDVFES---MKHFYEFGLSEGRDITF 399
+ L + LI G D + Y + L +G D+
Sbjct: 3215 TFYSKKSDIKMGSANDDRLYGNSTGKSTLIGGEGDDQLNGYHWIDDEYIYRLGDGNDVIV 3274
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
D + + + + + G A + I F
Sbjct: 3275 DFGGRNQLSFANVSKQDIEYFVSYGDLMVKILATGSEIKILDASNLTRPIDTSIKFFDGT 3334
Query: 460 PDLVQ-VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
+ +S G + +T L DD+ + Y + E
Sbjct: 3335 VFSSSYLAAVGYSLQGVSDQLDMTTSRVLEGTINDDVMSQ-----------YHSSIPTEF 3383
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
R + + + + + AG D +
Sbjct: 3384 RAGAGADIVNGTNADDVIFGGIGNDTLRGGAGDDIYL 3420
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 69/510 (13%), Positives = 117/510 (22%), Gaps = 99/510 (19%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + D + G G ++ +
Sbjct: 2598 GAAGNDTIYGGAGSDLIYGGYGDDYVVGGLGDDHLQGGGGHDVYKYYHGDGNDVISDFKG 2657
Query: 136 H---PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC--ATPMVSDIVA 190
V Y +V Y + + +D
Sbjct: 2658 VNIIDFDNISSTEVIFDRIGYNGADLQINVGEYSDSIVVKYYFDRQFSPIFSFNFADNAV 2717
Query: 191 VQ---------KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
+ + G + L N + + TI S GDD L G
Sbjct: 2718 LGFADLEEQFFHVVGTDQDDLLNYVLDGDYTITGGAGDDTIVTSAGDDTFVYALGDGNDI 2777
Query: 242 Y-----------IDLNTESWSSIGGYEKNMTIAQHTVIESV------------------- 271
D+N + I ++ I E++
Sbjct: 2778 IRDRLGENRLILEDINADQVVIIRSGASDIDIKFKNTNENIHLEDVLLGSVAEDFRINFA 2837
Query: 272 ----------------VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
GS+ +D + G+ N+V G+D G G DT+ + + +
Sbjct: 2838 DGVVWNKGDLAAQGAIFGSNASDNITGSYYNDVIEAGRGDDNLQGGYGDDTYIFNSGDGV 2897
Query: 316 YKIYRFENAIIVYDANEHKQDFLS--DVERLR--------------------------FA 347
+I IV D + E + F
Sbjct: 2898 DQIIDGIGTNIVKVNGVAPSDVGVVYNSEDIVLELGGNGDSIVLDDFLPRWNQEIVIKFD 2957
Query: 348 DQCIDSVNVKQRSILEYTASYED--LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
D N L S D L D+ E E G D L
Sbjct: 2958 DGTEWLRNNLLPDALSLMGSNSDEVLSGGHNDDLIEGGSGDDELRGGIGSDKY---VYSL 3014
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE--DLINAFADAPDLV 463
G +D+ R + ++ N + + +I S E + F +
Sbjct: 3015 GDGNDVILDGNGANSVLLRSILPEQIELASNLEKDLLVNFIESGERLTIKGHFGSSAGTF 3074
Query: 464 QVGKDHFSNFGCEE----GRFVTFDSYLYL 489
+ S++G EE D YL
Sbjct: 3075 SLEFSDGSSWGAEEILRNTPIYGTDDNDYL 3104
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 58/347 (16%), Positives = 92/347 (26%), Gaps = 72/347 (20%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--ENAIIVY 328
V G+ G+D ++G ++VF G+DV G SG D F Y I + +
Sbjct: 2273 VRGTDGDDTLLGTDLDDVFEGGRGDDVIYGFSGNDQFLYAEGDGNDVIKATIDQPGQQIL 2332
Query: 329 DANEHKQDFL------------------------SDVERLRFADQCIDSVNVKQRSILEY 364
A D L S E + F DQ +N R +E
Sbjct: 2333 GAAALGDDMLVFKDLNEDDVELYRDGVDIKVKIKSTGELITFEDQLQIFINAADREEIE- 2391
Query: 365 TASYEDLIQVIGQ-------DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
S + + G + ++ G + + G DD S
Sbjct: 2392 NISVDVIRFADGTTWTARDIALLTPIEGTNGNDYLTGSHTVWLDVIVGGRGDDTIRGANS 2451
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ + G L A + L + D G+D +
Sbjct: 2452 RYASLDVEDVLIG------GSGDDKLYGYAGSDVLDGGYGDDFLNGGAGEDRLEGGEGND 2505
Query: 478 GRFVTFDSYLYLGSYDD-------LRNVFGSDRGAAARHYITH----------------- 513
D+ + +G D A + H
Sbjct: 2506 RLLGDADADVIIGGNGIDEVYYYTSNAAVIVDLNDALPEHGGHAEGDVLFSIENILGSSY 2565
Query: 514 -----GVKEGRNPDAF---KALEYIASHEDLINAFADAPDLVQAGKD 552
G EG + D + L + +DL A + AG D
Sbjct: 2566 ADTLRGDDEGNSIDGYYGDDLLYGLGGDDDLKGAAGNDTIYGGAGSD 2612
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 62/264 (23%), Gaps = 41/264 (15%)
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+G++G D +L I + AN R D +
Sbjct: 2417 IEGTNGNDYLTGSHTVWLDVIVGGRGDDTIRGANS----------RYASLDVEDVLIGGS 2466
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L A + L G D EG D D + G
Sbjct: 2467 GDDKLYGYAGSDVLDGGYGDDFLNGGAGEDRLEGGEGNDRLLGDA-------DADVIIGG 2519
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ +Y ++ A + ++ L A V ++ +
Sbjct: 2520 NGIDEVYYYTSN------------AAVIVDLNDALPEHGGHAEGDVLFSIENILGSSYAD 2567
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
+ G Y D Y G + + + A + +
Sbjct: 2568 TLRGDDEGNSIDGYYGDDLL------------YGLGGDDDLKGAAGNDTIYGGAGSDLIY 2615
Query: 538 NAFADAPDLVQAGKDHFSNFGYEE 561
+ D + G DH G +
Sbjct: 2616 GGYGDDYVVGGLGDDHLQGGGGHD 2639
Score = 44.0 bits (102), Expect = 0.091, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY----RFENA 324
E + G+ G+D++ G + N+VF G+D G G D + + KI E
Sbjct: 2125 EIIRGTRGDDLLQGTNNNDVFRGGLGDDTLFGGDGDDVYLWKKGDGNDKIAASSLSSEGD 2184
Query: 325 IIVYDANEHKQDFL 338
A QD L
Sbjct: 2185 EYGVVAQGLGQDLL 2198
Score = 42.5 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 26/65 (40%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
N + G N+ +SG+D+ G+ G DT + Y R + V D +
Sbjct: 3092 NTPIYGTDDNDYLSGTSGDDIISGAQGNDTLAGGGGNDTYIYNRGDGNDEVLDRSGQNTL 3151
Query: 337 FLSDV 341
L D+
Sbjct: 3152 ILKDI 3156
>gi|254500524|ref|ZP_05112675.1| animal heme peroxidase superfamily protein [Labrenzia alexandrii
DFL-11]
gi|222436595|gb|EEE43274.1| animal heme peroxidase superfamily protein [Labrenzia alexandrii
DFL-11]
Length = 689
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 47/126 (37%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+L + I + + + +D G D L+G + + L + G
Sbjct: 505 STTLADVIERNTDIRSIQDNVMLAHDRLGGTNRDDALVGSEERDLILGNRGNDVLDGAGG 564
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + + G +GND++ G N+V +GND DG G D F + +
Sbjct: 565 DDQLEGQDGNDVLFGQAGNDILYGGDGNDVLVGGTGNDTLDGGRGSDAFVFDGAFGSDTV 624
Query: 319 YRFENA 324
F +
Sbjct: 625 TDFSTS 630
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/230 (14%), Positives = 61/230 (26%), Gaps = 50/230 (21%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVI-----------ESVVGSSGNDVVIGNSANNVFFE 291
+DL ++ I ++T I + + G++ +D ++G+ ++
Sbjct: 493 LDLPQAQIDALWSTTLADVIERNTDIRSIQDNVMLAHDRLGGTNRDDALVGSEERDLILG 552
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+ GNDV DG+ G D +L D
Sbjct: 553 NRGNDVLDGAGGDD-------------------------------------QLEGQDGND 575
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYD 409
IL + L+ G D + + F + G D D + D
Sbjct: 576 VLFGQAGNDILYGGDGNDVLVGGTGNDTLDGGRGSDAFVFDGAFGSDTVTDFSTSNRNGD 635
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
L+ +A + G L + A
Sbjct: 636 ILQIGVAGFSSSAEILALAADTDAGAVLSFSDNLSITLLGVSVSQLDASD 685
>gi|1514965|dbj|BAA11525.1| stromelysin-1/2-b [Cynops pyrrhogaster]
Length = 469
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 60/191 (31%), Gaps = 51/191 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKF 81
W + + Y+ T D+ + A WS V LTF + +DI+
Sbjct: 107 WRTHALTYRILNYTPDMARADVD-------TAIQKAFKVWSDVTPLTFTQIYYGTADIQI 159
Query: 82 ISS---------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ P + + +FD+ + W + GT L A H
Sbjct: 160 SFGAREHGDFNPFDGPYGTLAHAFAP--GTGIGGDAHFDEDEKWSK-VSTGTNLFLVAAH 216
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E GH+LGL H ++ + SY P A F
Sbjct: 217 EFGHSLGLSHSND---------------RNALMFPTYSYTDP------ARFRLPK----D 251
Query: 187 DIVAVQKIYGA 197
DI +Q IYG
Sbjct: 252 DINGIQAIYGP 262
>gi|194219304|ref|XP_001498812.2| PREDICTED: similar to matrix metalloproteinase 25 preproprotein
[Equus caballus]
Length = 599
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 53/186 (28%), Gaps = 36/186 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETSIH 76
L W + ++ + L+ + + AL W V L+F+E
Sbjct: 147 LSGSVWKKRTLTWRVQSFP------QSSALSQETVRTLMHHALTAWGAVSGLSFQEVGSQ 200
Query: 77 S----DIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYG--IG 115
DI + P + +FD + W +G G
Sbjct: 201 GPSEPDILIDFARAYHQDSYPFDGQGGTLAHAFFPGEHP-ISGDTHFDDEETWTFGSKDG 259
Query: 116 KGTILSHNALHEIGHALGLMHPG-------SYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
+GT L A+HE GHALGL H + G D Y
Sbjct: 260 EGTDLFAVAVHEFGHALGLGHSSVPDSIMRPFYQGPVGDPTKYRLSQDDREGLEQLYGKA 319
Query: 169 QDSMMD 174
+ D
Sbjct: 320 PQTPYD 325
>gi|56681790|gb|AAW21431.1| leukotoxin A [Pasteurellaceae bacterium I6]
Length = 391
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 40/101 (39%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N I ++ + G + TI + + + G G+D++ G + ++ GND
Sbjct: 225 GTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGND 284
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G G D F + I E + ++ + +D
Sbjct: 285 LLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDL 325
Score = 44.8 bits (104), Expect = 0.048, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 47/212 (22%), Gaps = 48/212 (22%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIV------ 327
V ++ F SG DG G D Y +Y + V
Sbjct: 117 VATLGDGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVES 176
Query: 328 ------------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ A + +D L VE + K
Sbjct: 177 GKALHEVTSTHTALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSK 236
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ + G D K G D ++ G +DL +
Sbjct: 237 FNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKG 291
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
D H G + L + S+
Sbjct: 292 DDI--FVHRQGDGNDSITESEGNDKLSFSDSN 321
>gi|50234983|gb|AAT70722.1| matrix metalloproteinase 20 (enamelysin) [Homo sapiens]
gi|119587428|gb|EAW67024.1| matrix metallopeptidase 20 (enamelysin) [Homo sapiens]
Length = 483
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 59/198 (29%), Gaps = 53/198 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T S ++ + AL WS V L+F + +DI
Sbjct: 117 WKKNTLTYRISKYTPSMSSVEVDK-------AVEMALQAWSSAVPLSFVRINSGEADIMI 169
Query: 82 ISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
N + P + +FD A+ W G G L A H
Sbjct: 170 SFENGDHGDSYPFDGPRGTLAHAFAP--GEGLGGDTHFDNAEKWTMGT-NGFNLFTVAAH 226
Query: 127 EIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
E GHALGL H YP Y N Y
Sbjct: 227 EFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKD------------------------- 261
Query: 186 SDIVAVQKIYGAPKGSLG 203
D+ +Q +YG K LG
Sbjct: 262 -DVKGIQALYGPRKVFLG 278
>gi|329849391|ref|ZP_08264237.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328841302|gb|EGF90872.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1280
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/309 (10%), Positives = 73/309 (23%), Gaps = 15/309 (4%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D+ L G N ++ G N ++ + ++V G GND ++G
Sbjct: 520 DASTMTSAGLLFAGNAGNDTLKGGSLNDTLTGGIGNDSLEGGSGNDTVNGGDGNDTLLGG 579
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ GND + + D+ + + + L+
Sbjct: 580 VGADTLTGGLGNDTYYVDNAADSVVEAHLEGTDTVIS--SVTYSLLGRAAENLTLTG--- 634
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+++ + L + + G D + + D +
Sbjct: 635 ----AGHLNATGNGLNNTLTGNSGNNLIDGGAGNDSMTGGAGNDTYIVDSIGDTVTEGGG 690
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
F G+ G L + L + ++
Sbjct: 691 AGLDIVQSAVTFTLGADIEDLTLTGGGLANGTGNALNNRLIGNTAGNTLTGKAGNDTYVL 750
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
Q D E + + L + + + G+ G +
Sbjct: 751 QNSSDSAVEAAAEGTDTIETNLTRTLSANIENLILTGASA------INGTGNELNNALTG 804
Query: 524 FKALEYIAS 532
A +
Sbjct: 805 NTAANVLTG 813
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 61/406 (15%), Positives = 116/406 (28%), Gaps = 37/406 (9%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE------- 248
G GN + + G+D + I L
Sbjct: 870 GLNNALTGN---AGANLLDGGAGVDILTGGLGNDTYYVDHISDNVVEAHLEGTDSVISSV 926
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+++ +G +N+T+ T + +G+ N+V++GN+ NN+ + GND G G DT
Sbjct: 927 TYTLLGRAAENLTL-TGTANLNAIGNGLNNVLVGNTGNNLLDGAVGNDSMTGGLGNDT-- 983
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI-DSVNVKQRSILEYTAS 367
Y + + + +++E L I ++ + L +
Sbjct: 984 YTVDAAGDVVTEAVGEGTDEVQSTRTYVLGANLENLVLTGTGIANATGNALNNRLTGNIT 1043
Query: 368 YEDLIQVIGQDVFESMKHFYEFG--LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
L +G DV+ + EG D S Y + + +
Sbjct: 1044 GNVLTGGLGNDVYVVQNTSDTTVELVGEGTDFVVSSVSYTLAANVENLTLTGTANLS--- 1100
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
G D L + + L D +Q D E D+
Sbjct: 1101 --------GTGNDLANVLTGNSGNNILTGGLGDDIYYIQNAGDSVV-----EQHLQGTDT 1147
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI---ASHEDLINAFAD 542
+ +Y G + + + A +++L
Sbjct: 1148 VVSTVTYSLFGRAIELLTLTGTADINATGNGLSNSLIGNSGVNILEAGAGNDNLRGNGGA 1207
Query: 543 AP--DLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSD 586
L +G D +F + SI N + + L G++
Sbjct: 1208 DVFLFLTGSGLDTVKDFTAAQNDSINVNAYMAGVANAGLVTQSGAN 1253
Score = 46.7 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 44/342 (12%), Positives = 97/342 (28%), Gaps = 40/342 (11%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E ++ + NG ++ + D G+G T A +
Sbjct: 936 ENLTLTGTANLNAIGNGLNNVLVGNTGNNLLDGAVGNDSMTGGLGNDTYTVDAAGDVVTE 995
Query: 131 ALG-------------------------------LMHPGSYNGGYPVYGVDNDYENDSFL 159
A+G + + + G + +
Sbjct: 996 AVGEGTDEVQSTRTYVLGANLENLVLTGTGIANATGNALNNRLTGNITGNVLTGGLGNDV 1055
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
V + ++ + + + + A V+ + +L + +
Sbjct: 1056 YVVQNTSDTTVELVGEGTDFVVSSVSYTLAANVENLTLTGTANLSGTGNDLANVLTGNSG 1115
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-------SWSSIGGYEKNMTIAQHTVIESV 271
+ GDD+ + G L ++S G + +T+ I +
Sbjct: 1116 NNILTGGLGDDIYYIQNAGDSVVEQHLQGTDTVVSTVTYSLFGRAIELLTLTGTADI-NA 1174
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G+ ++ +IGNS N+ +GND G+ G D F + S L + F A
Sbjct: 1175 TGNGLSNSLIGNSGVNILEAGAGNDNLRGNGGADVFLFLTGSGLDTVKDFTAAQNDSINV 1234
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+++ + + + I A+ D++
Sbjct: 1235 NAYMAGVANAGLVTQSGANVLISLSAGNVITVENATQADVLA 1276
Score = 45.2 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 67/315 (21%), Gaps = 76/315 (24%)
Query: 270 SVVGSSGNDVVIGNSANNVFFES--SGNDVFDGSSGLDTFFYYAPSYLY--------KIY 319
++ G G+D + G N++ F G D G +G DT + ++
Sbjct: 410 NLTGGMGSDTINGLDGNDMIFGGEGPGRDDMFGGAGNDTITLWGGDGADGGTGDDIIRVT 469
Query: 320 RFENAIIVYDANEHKQDF----------------LSDVERLR---FADQCIDSVNVKQRS 360
++ D + +E R F D S
Sbjct: 470 HLTGETVIGLTGGTGFDIMDASLADGGPGWIFVNFTSIEEYRGSAFNDYLDASTMTSAGL 529
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ A + L D G D D L G+D
Sbjct: 530 LFAGNAGNDTLKGGSLNDTLTGGIGNDSLEGGSGNDTV----NGGDGNDTLLGGVGADT- 584
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
L + V D E
Sbjct: 585 -------------------------------LTGGLGNDTYYVDNAADSVV-----EAHL 608
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
D+ + +Y L + A H G + + +
Sbjct: 609 EGTDTVISSVTYSLLGRAAENLTLTGAGHLNATGNGLNNTLTGN------SGNNLIDGGA 662
Query: 541 ADAPDLVQAGKDHFS 555
+ AG D +
Sbjct: 663 GNDSMTGGAGNDTYI 677
>gi|300794469|ref|NP_001178363.1| matrix metallopeptidase 15 (membrane-inserted) [Bos taurus]
gi|297485306|ref|XP_002694844.1| PREDICTED: matrix metallopeptidase 15 (membrane-inserted) [Bos
taurus]
gi|296478084|gb|DAA20199.1| matrix metallopeptidase 15 (membrane-inserted) [Bos taurus]
Length = 675
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 59/212 (27%), Gaps = 56/212 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + W+N+ + + T + E R A W + L F+E
Sbjct: 134 LTGRKWNNHHLTFSIQNYTEKLGWYHSLE-------AVRRAFRVWEQATPLVFQEVPYED 186
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+ +
Sbjct: 187 IRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSST 246
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
G L A+HE+GHALGL H + + + D +N
Sbjct: 247 DLHGNSLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDIDN------------------ 288
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
F D+ +Q++YG P G
Sbjct: 289 ---FQLPE----DDLRGIQQLYGTPDGQPQPT 313
>gi|47228189|emb|CAG07584.1| unnamed protein product [Tetraodon nigroviridis]
Length = 519
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 57/204 (27%), Gaps = 47/204 (23%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
+ W + + + LS D+T + + A WS L F S
Sbjct: 81 ISGLKWHKTDLTWSVHSYPSPSLSPDLT--DGLVDTILSHAFKAWSNAAALNFHRVSTDN 138
Query: 77 -SDIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG--- 117
DI+ + P + +FD ++W YG+ G
Sbjct: 139 EGDIRVSFNRLFHDDGYPFDGQGGTLAHAFFP-GRGEVAGDTHFDDQEIWSYGVSSGDSS 197
Query: 118 -TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
T L A+HE GHALGL H S Y
Sbjct: 198 TTDLFTVAVHEFGHALGLSHSSSDPSIMKPYYQ-----------------------GSVG 234
Query: 177 FGYCATPMVSDIVAVQKIYGAPKG 200
D A+Q++YG
Sbjct: 235 DIVNFQLAADDKNAIQQLYGVRDN 258
>gi|218246541|ref|YP_002371912.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 8801]
gi|218167019|gb|ACK65756.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 8801]
Length = 395
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 81/273 (29%), Gaps = 11/273 (4%)
Query: 243 IDLNTESWSS-IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
IDL S S + G +N+T+ + I+ G++ N+ + GNS NN+ SGND G
Sbjct: 27 IDLVYSSVSYTLSGNLENLTLTGSSNID-GTGNNFNNYITGNSGNNILDGQSGNDTLVGG 85
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G DT+ + + R + V + + + + + I+ ++
Sbjct: 86 AGNDTYIIDSLGDVIIELRNQGIDTVMASVTYTMNSSTLENLILTGTNSINGTGNFSSNL 145
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY-------LGSYDDLRNV 414
L + L G D + D + D +
Sbjct: 146 LIGNSGNNILDGSYGNDTLDGGLGMDTLKGGFDNDTYMVDTVDDVIIENLGEGTDTVNAS 205
Query: 415 FGSDRGAAARHYITHG--VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
F G+ + G G + + + L + L G D
Sbjct: 206 FSYTLGSNLENLTLTGTNNLNGTGNSLNNVITGNSGNNILRGNAGNDTLLGGNGTDELWG 265
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ ++ G D A
Sbjct: 266 GQGNDSLTGGEGRDYFIFGGVANFGELGVDSVA 298
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 73/262 (27%), Gaps = 23/262 (8%)
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
VY + + + ++ D + Y ++I+ Q G GN+
Sbjct: 30 VYSSVSYTLSGNLENLTLTGSSNIDGTGNNFNNYITGNSGNNILDGQSGNDTLVGGAGND 89
Query: 206 IYKIEV---------QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
Y I+ Q + ++ + L+ ++ G + S + + G
Sbjct: 90 TYIIDSLGDVIIELRNQGIDTVMASVTYTMNSSTLENLILTGTNSINGTGNFSSNLLIGN 149
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N + +++ G G + ND + + D
Sbjct: 150 SGNNILDGSYGNDTLDGGLG---------MDTLKGGFDNDTYMVDTVDDVIIENLGEGTD 200
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID--SVNVKQRSILEYTASYEDLIQV 374
+ + + + L+ L ++ +IL A + L+
Sbjct: 201 TV---NASFSYTLGSNLENLTLTGTNNLNGTGNSLNNVITGNSGNNILRGNAGNDTLLGG 257
Query: 375 IGQDVFESMKHFYEFGLSEGRD 396
G D + EGRD
Sbjct: 258 NGTDELWGGQGNDSLTGGEGRD 279
>gi|26354436|dbj|BAC40846.1| unnamed protein product [Mus musculus]
Length = 319
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 58/185 (31%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 113 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 172
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 173 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 229
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S + Y P DI +Q
Sbjct: 230 LQHSNNPK---------------SIMYPTYRYLNPST----------FRLSADDIRNIQS 264
Query: 194 IYGAP 198
+YG P
Sbjct: 265 LYGPP 269
>gi|303251069|ref|ZP_07337255.1| RTX toxin protein [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|302650079|gb|EFL80249.1| RTX toxin protein [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
Length = 1668
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 64/532 (12%), Positives = 138/532 (25%), Gaps = 96/532 (18%)
Query: 66 VDLTFEETSI---HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ F E++ + + + I + D + G T L
Sbjct: 1069 AGVIFAESTDLKGDEKNNILLGSQKDNNLSGSAGD-DLLIGGEGNDTLKGSYGADTYLFS 1127
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
G ++ + D+ + ++Y +
Sbjct: 1128 KG------------HGQDVIYEYSDSANSKSDIDTLKFTDINYAEVKFR----------- 1164
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
V D + + +G + ++ D G +
Sbjct: 1165 -RVGDDLML---FGYHDTDSVTVKSFYNHEYYQFEKLEF------ADRSITRDELGKQGM 1214
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DG 300
T+ I + +N I +++ GS G+D +IG + N++ S G D +
Sbjct: 1215 ALFGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYLFSK 1274
Query: 301 SSGLDTFFYYAPSYLY--------------------------KIYRFENAIIVYDANEHK 334
G D + Y+ S ++ + + V + +
Sbjct: 1275 GHGQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVGYDLMLFGYHDTDSVTVKSFYS 1334
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSI-LEYTASYED----------LIQVIGQDVFESM 383
++ E+L FAD+ I + + + L T +D L G D+
Sbjct: 1335 HEYYQ-FEKLEFADRSITRDELIKAGLHLYGTDGNDDIKDHADWDSILEGGKGNDILRGG 1393
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ S+G +Y + +D R +Y +
Sbjct: 1394 YGADTYIFSKGHG---QDIVYEDTNNDNRARDIDTLKFTDVNYAEVKFR------RVDND 1444
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ + D + + + +F R +T D +FG+D
Sbjct: 1445 LMLFGYHDTDSVTIKSFYNHVDYQFDKLDFAD---RSITRDEL-----GKQGMALFGTDG 1496
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ + + + LI + G D +
Sbjct: 1497 DDNINDWGRN--SVIDAGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYI 1546
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 10/96 (10%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + +GND V G + ++ GND+ G G DT+ +
Sbjct: 1491 LFGTDGDDNINDWGRNSVIDAGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYIFSKG 1550
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+Y N D++ L+F D
Sbjct: 1551 HGQDIVYEDTNNDN----------RARDIDTLKFTD 1576
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 48/336 (14%), Positives = 90/336 (26%), Gaps = 76/336 (22%)
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG--APKGSLGNN 205
G ND N S+ + D + + V Y A +
Sbjct: 1237 GAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYLFSKGHGQDVIYEYSDSANSKRDIDT 1296
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +V + F + YD D + Y + E + + +I +
Sbjct: 1297 LKFTDVNYAEVKFRRVGYDLMLFGYHDTDSVTVKSFY---SHEYYQFEKLEFADRSITRD 1353
Query: 266 TVIE---SVVGSSGNDVVIGN-SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY-- 319
+I+ + G+ GND + + +++ GND+ G G DT+ + +Y
Sbjct: 1354 ELIKAGLHLYGTDGNDDIKDHADWDSILEGGKGNDILRGGYGADTYIFSKGHGQDIVYED 1413
Query: 320 -RFENAIIVYDA-----------------------NEHKQDFLS----------DVERLR 345
+N D H D ++ ++L
Sbjct: 1414 TNNDNRARDIDTLKFTDVNYAEVKFRRVDNDLMLFGYHDTDSVTIKSFYNHVDYQFDKLD 1473
Query: 346 FADQCID----------------------------SVNVKQRSILEYTASYEDLIQVIGQ 377
FAD+ I + + LI G
Sbjct: 1474 FADRSITRDELGKQGMALFGTDGDDNINDWGRNSVIDAGAGNDTVNGGNGDDTLIGGKGN 1533
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
D+ + S+G +Y + +D R
Sbjct: 1534 DILRGGYGADTYIFSKGHG---QDIVYEDTNNDNRA 1566
>gi|157831037|pdb|1FBL|A Chain A, Structure Of Full-Length Porcine Synovial Collagenase
(Mmp1) Reveals A C-Terminal Domain Containing A Calcium-
Linked, Four-Bladed Beta-Propeller
Length = 370
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 57/185 (30%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W N + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 9 RWENTHLTYRIENYTPDLSREDVD-------RAIEKAFQLWSNVSPLTFTKVSEGQADIM 61
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 62 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTKNF-RDYNLYRVAA 118
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H +Y D D Y ++ + + T
Sbjct: 119 HELGHSLGLSHSTDIGALMYPNYIYTGDVQLSQDDIDGIQAIYGPSENPVQPSG---PQT 175
Query: 183 PMVSD 187
P V D
Sbjct: 176 PQVCD 180
>gi|332186074|ref|ZP_08387820.1| hemolysin-type calcium-binding repeat family protein [Sphingomonas
sp. S17]
gi|332013889|gb|EGI55948.1| hemolysin-type calcium-binding repeat family protein [Sphingomonas
sp. S17]
Length = 623
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 64/453 (14%), Positives = 122/453 (26%), Gaps = 55/453 (12%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVV 66
++ + + RD + + D T+LN E+A + + V
Sbjct: 95 TFSGPQAKIYEERDTSGHVTRLSVTFAGTNSPVDLLDYTQLNSG--EIAPYMEQLLTAVR 152
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADV-WRYGIGKGTILSHNAL 125
D D+ + G T AD + T + +
Sbjct: 153 DYALRNGLTADDVIVTGYSLGAAYTNIMAKYADTLAGGFFADSSYVAHAVPYTYEGQDRV 212
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
IG ++H + + VD ++ S D+++ S Y
Sbjct: 213 LNIGFENDIVHRAAGDFDSLGEAVDAAPGLIGQDYALQS---STDNLILFSDDYANPAWP 269
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
A+ I G + + S F + D L+ ++ + I
Sbjct: 270 YGPFALYNIPGGWAAHVAGITSDAVTRITQSAFYDL---TSRDSLVIVSNLTAATRDIAW 326
Query: 246 NTESW--SSIGGYEKNMTIAQHTVI-ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ S G+ + + + + G+ GND + G ++V +G + +G
Sbjct: 327 VEDLARPSDRHGHVGDSAFLIGSQFGDRLRGNVGNDYIDGAGGDDVIRPGTGQNRIEGGL 386
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ------------- 349
G DT + + R + + + + +S VE++ F D
Sbjct: 387 GTDTLELSGSMRDWSVSRLADGTTAFFSKSFGLNIVSGVEKVTFLDTGLWGGRHYTIEAD 446
Query: 350 --------------------CIDSVNVKQRSILE-----YTASYEDLIQVIGQDVFESMK 384
+L A + L G D+
Sbjct: 447 RLEDQTFSGMFERFDQDIAYTAARQGTAGADVLTGSRVFGLAGNDTLTGTNGSDLLYGGS 506
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
G D LY G +D G
Sbjct: 507 GDDRLDGRGGND-----SLYGGEGNDWLTGGGG 534
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 62/219 (28%), Gaps = 9/219 (4%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM--HPGSYNGGYPVYGVDNDY 153
I D R +G I I G G + G D+
Sbjct: 341 GDSAFLIGSQFGDRLRGNVGNDYIDGAGGDDVIRPGTGQNRIEGGLGTDTLELSGSMRDW 400
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
++F + S T + + + + Y L + + ++
Sbjct: 401 SVSRLADGTTAFFSKSFGLNIVSGVEKVTFLDTGLWGGRH-YTIEADRLEDQTFSGMFER 459
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
D T G ++ G + + ++ G + + + + + G
Sbjct: 460 FDQDIAYTAARQG---TAGADVLTGSRVF---GLAGNDTLTGTNGSDLLYGGSGDDRLDG 513
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
GND + G N+ G D+ +G G D F A
Sbjct: 514 RGGNDSLYGGEGNDWLTGGGGRDLLNGGLGDDLFVVDAS 552
Score = 42.9 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 19/185 (10%), Positives = 44/185 (23%), Gaps = 8/185 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES---WSSIGGYEKNMTIAQ 264
+ + I G D L+L+ + L + +S G + +
Sbjct: 368 GGDDVIRPGTGQNRIEGGLGTDTLELSGSMRDWSVSRLADGTTAFFSKSFGLNIVSGVEK 427
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
T +++ + + + + + F D + A +
Sbjct: 428 VTFLDTGLWGGRHYTIEADRLEDQTFSG-----MFERFDQDIAYTAARQGTAGADVLTGS 482
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ A + + L L + L G+D+
Sbjct: 483 RVFGLAGNDTLTGTNGSDLLYGGSGDDRLDGRGGNDSLYGGEGNDWLTGGGGRDLLNGGL 542
Query: 385 HFYEF 389
F
Sbjct: 543 GDDLF 547
>gi|115667817|ref|XP_001176394.1| PREDICTED: similar to hatching enzyme [Strongylocentrotus
purpuratus]
gi|115700136|ref|XP_001176086.1| PREDICTED: similar to hatching enzyme [Strongylocentrotus
purpuratus]
Length = 595
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 58/179 (32%), Gaps = 40/179 (22%)
Query: 34 VLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFISSNNGYVCT 91
+ L+ D+ + + R A W V LTF E S DI+ + +
Sbjct: 184 TYSFGTLTNDLNQ--NAIKNELRRAFQVWVDVSGLTFREVVDSSSVDIRIKFGSYEHGDG 241
Query: 92 PRYDSRYF----------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+D + + +FD ++ W G GT L A HE GH+LGL H
Sbjct: 242 ISFDGQGGVLAHAFLPRNGDAHFDDSESWTIGTNFGTNLFQVAAHEFGHSLGLYHS---- 297
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
D + Y+ + + DI + +YG G
Sbjct: 298 --------------DVQAALMYPYYRGYNPNFNLDR--------DDIAGITSLYGRNTG 334
>gi|54261660|gb|AAH84654.1| Mmp18 protein [Xenopus laevis]
Length = 466
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 54/201 (26%), Gaps = 49/201 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPN-----AQEVARWALGEWSKVVDLTFE---- 71
Y K L++ I P+ + + A WS V LTF
Sbjct: 94 YDVGQYSTVAKSSAWQKKDLTYRILNFTPDLPQADVETAIQRAFKVWSDVTPLTFTRIYN 153
Query: 72 -----ETSIHSDIK-----FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
E S + F S + + + +FD+ + W L
Sbjct: 154 EVSDIEISFTAGDHKDNSPFDGSGGILAHAFQPGNGIGGDAHFDEDETWTKTSEIYN-LF 212
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE GH+LGL H + D
Sbjct: 213 LVAAHEFGHSLGLSHSTDQGALMYPTYSNTD---------------------------PK 245
Query: 182 TPMV--SDIVAVQKIYGAPKG 200
T + DI A+Q +YG
Sbjct: 246 TFQLPQDDINAIQYLYGKSSN 266
>gi|9506899|ref|NP_062344.1| stromelysin-2 precursor [Mus musculus]
gi|13124340|sp|O55123|MMP10_MOUSE RecName: Full=Stromelysin-2; Short=SL-2; AltName: Full=Matrix
metalloproteinase-10; Short=MMP-10; AltName:
Full=Transin-2; Flags: Precursor
gi|2791312|emb|CAA73641.1| stromelysin 2 [Mus musculus]
gi|12860835|dbj|BAB32058.1| unnamed protein product [Mus musculus]
gi|120538365|gb|AAI30028.1| Matrix metallopeptidase 10 [Mus musculus]
gi|148692989|gb|EDL24936.1| mCG9885 [Mus musculus]
Length = 476
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 65/195 (33%), Gaps = 49/195 (25%)
Query: 25 NYFIRY-KPDVLTTHRLSFDITELNP-----NAQEVARWALGEWSKVVDLTFEETSIH-S 77
F + +++ I P + AL W +V LTF S +
Sbjct: 98 GGFSTFPGSPKWRKSHITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSRISEGEA 157
Query: 78 DIKFISS---------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + + + P ++ +++FD + W GT L
Sbjct: 158 DIMISFAVGEHGDFYPFDGPGQSLAHAYPP--GPGFYGDVHFDDDEKWTLAP-SGTNLFL 214
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE+GH+LGL H S+M Y + + S A+F
Sbjct: 215 VAAHELGHSLGLFHS-------------------DKKESLM-YPVYRFSTSPANFHLSQ- 253
Query: 183 PMVSDIVAVQKIYGA 197
DI +Q +YGA
Sbjct: 254 ---DDIEGIQSLYGA 265
>gi|123968968|ref|YP_001009826.1| hypothetical protein A9601_14361 [Prochlorococcus marinus str.
AS9601]
gi|123199078|gb|ABM70719.1| Hypothetical protein A9601_14361 [Prochlorococcus marinus str.
AS9601]
Length = 4723
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/345 (14%), Positives = 107/345 (31%), Gaps = 9/345 (2%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
G+ GG + + + D S+ + D+ + G +T ++D +KI
Sbjct: 217 SGTTEGGNTLSISQDAADPDGTGALSYSWQISSDNSTWSEVGTSSTYAIADSDQGKKIRA 276
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
N + ++ T+ D + +T GG N + + + + ++ G
Sbjct: 277 VISY-TDNEGHSEQITTVSKDIFFTVAD---NTTEGITASGGSGNDLLIGSRNNDTLKGL 332
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N I +++ G G+D + G N+ + + G D G G D Y S
Sbjct: 333 DGNDEIYGGDGDDNIEGGYGDDTIYGGGGNDTLYGNEGTDAIYGGDGNDQI-YAGSSGGA 391
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL---IQ 373
+ +I + + + S + ++ D L+ + + +
Sbjct: 392 ETSNTNEQLIDAGSGDDRMYIRSGSKNVKILAGDGDDHIDGDFRYLDAGSGDDFIEIYSY 451
Query: 374 VIGQDVFESMKHFYEF-GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
D F+ E + G + S + + ++ + D A G
Sbjct: 452 GYQVDYFDGGTGTDELMIIPVGNNSGTGSSTWGYAIKNVEKITFRDSYYANLGDQAAGDG 511
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
EG DA + + F G +
Sbjct: 512 EGIEVDASTRENSSDGTFTVGSTFEGDITFKGSAGVDIVTLGKGD 556
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/399 (12%), Positives = 109/399 (27%), Gaps = 31/399 (7%)
Query: 83 SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNG 142
+S++G D+ G G + + + LG +
Sbjct: 523 NSSDGTFTVGSTFEGDITFKGSAGVDIVTLGKGDDVLTLGSGDDIVYSGLG-SNTIDGGE 581
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
G + + + + TS + ++ ++ + + + +
Sbjct: 582 GTDIVTITGNEAQYTETTSGLYTIFTKNDSLEITKIINVETVKF------------QDNS 629
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+I + I +GGDD ++ ++ G + N I
Sbjct: 630 TKSIPVPDQTLNGDADNNEISGAGGDDSIN-------------GYGGNDTLKGLDGNDEI 676
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++ G G+D + G N+ + + G D G G D Y S +
Sbjct: 677 YGGDGDDNIEGGYGDDTIYGGGGNDTLYGNEGTDAIYGGDGNDQI-YAGSSGGAETSNTN 735
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL---IQVIGQDV 379
+I + + + S + ++ D L+ + + + D
Sbjct: 736 EQLIDAGSGDDRMYIRSGSKNVKILAGDGDDHIDGDFRYLDAGSGDDFIEIYSYGYQVDY 795
Query: 380 FESMKHFYEF-GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
F+ E + G + S + + ++ + D A G EG D
Sbjct: 796 FDGGTGTDELMIIPVGNNSGTGSSTWGYAIKNVEKITFRDSYYANLGDQAAGDGEGIEVD 855
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
A + + F G +
Sbjct: 856 ASTRENSSDGTFTVGSTFEGDITFKGSAGVDIVTLGKGD 894
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 47/449 (10%), Positives = 95/449 (21%), Gaps = 77/449 (17%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
D G G T+ + I G + + G
Sbjct: 673 NDEIYGGDGDDNIEGGYGDDTIYGGGGNDTLYGNEGTDAIYGGDGNDQIYAGSSGGAETS 732
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMM----------DASFGYCATPMVSDIVAVQKIYG-- 196
N+ D+ Y + D YG
Sbjct: 733 NTNEQLIDAGSGDDRMYIRSGSKNVKILAGDGDDHIDGDFRYLDAGSGDDFIEIYSYGYQ 792
Query: 197 ------------------APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG- 237
G++ + ++ + + Y + D G
Sbjct: 793 VDYFDGGTGTDELMIIPVGNNSGTGSSTWGYAIKNVEKITFRDSYYANLGDQAAGDGEGI 852
Query: 238 --GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+ + +++ +E ++T ++ V G+DV+ S +++ + G+
Sbjct: 853 EVDASTRENSSDGTFTVGSTFEGDITFKGSAGVDIVTLGKGDDVLTLGSGDDIVYSGLGS 912
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD------- 348
+ DG G D Y I + + + +VE ++F D
Sbjct: 913 NTIDGGEGTDIVTITGNEAQYTETTSGLYTIFTKNDSLEITKIINVETVKFQDNSTKSIP 972
Query: 349 -------------------------------------QCIDSVNVKQRSILEYTASYEDL 371
+ +E + +
Sbjct: 973 VPDQTLNGDADNNEISGAGGDDSINGYGGNDTLKGLDGNDEIYGGDGDDNIEGGYGDDTI 1032
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D + +G D + + R YI G
Sbjct: 1033 YGGGGNDTLYGNEGTDAIYGGDGNDQIYAGSSGGAETSNTNEQLIDAGSGDDRMYIRSGS 1092
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAP 460
K + L D
Sbjct: 1093 KNVKILAGDGDDHIDGDFRYLDAGSGDDF 1121
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 81/298 (27%), Gaps = 35/298 (11%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
D G G T+ + I G + + G
Sbjct: 1011 NDEIYGGDGDDNIEGGYGDDTIYGGGGNDTLYGNEGTDAIYGGDGNDQIYAGSSGGAETS 1070
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMM----------DASFGYCATPMVSDIVAVQKIYG-- 196
N+ D+ Y + D YG
Sbjct: 1071 NTNEQLIDAGSGDDRMYIRSGSKNVKILAGDGDDHIDGDFRYLDAGSGDDFIEIYSYGYQ 1130
Query: 197 ------------------APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG- 237
G++ + ++ + + Y + D G
Sbjct: 1131 VDYFDGGTGTDELMIIPVGNNSGTGSSTWGYAIKNVEKITFRDSYYANLGDQAAGDGEGI 1190
Query: 238 --GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+ + +++ +E ++T ++ V G+DV+ S +++ + G+
Sbjct: 1191 EVDASTRENSSDGTFTVGSTFEGDITFKGSAGVDIVTLGKGDDVLTLGSGDDIVYSGLGS 1250
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENA--IIVYDANEHKQDFLSDVERLRFADQCI 351
+ DG G DT Y Y I + + + + +D L+ ++ + F+D +
Sbjct: 1251 NTIDGGEGEDTVIYSGTKDSYTIQYEVSNLFETISVSKDSNKDLLTSIKTISFSDADV 1308
>gi|260428426|ref|ZP_05782405.1| iron-regulated protein FrpC [Citreicella sp. SE45]
gi|260422918|gb|EEX16169.1| iron-regulated protein FrpC [Citreicella sp. SE45]
Length = 383
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 73/244 (29%), Gaps = 3/244 (1%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
++ G + S+ G E N I+ T +S+ G GND + GNS ++
Sbjct: 114 SIEGDSGDDTIYGGGGADSLEGDEGNDLISGGTGNDSIEGDEGNDSLYGNSGHDSVEGGD 173
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCID 352
G+D G +G DT + I + + + SD + +
Sbjct: 174 GDDYISGYTGNDTLV--GGAGDDMIVGGSGNDSIITNSGDDTVYGGSDDDFINAFSGNNL 231
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
+ + + G DV + G D+ S
Sbjct: 232 LNGGTGDDTISGGDGDDSIYGNSGDDVLDGRGGADYMSGYSGDDVLRAGGGDTLSGGSGA 291
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ F + A + + G + F EY D ++ D V + + +
Sbjct: 292 DSFLFEIVYADSTSVITDFEAGVDDIQFYGDEYTVYQGDALSQAVQVGDDVVITRQVYDA 351
Query: 473 FGCE 476
F
Sbjct: 352 FEGA 355
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 84/267 (31%), Gaps = 33/267 (12%)
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G P Y+GG +D + NDS + + + D G
Sbjct: 63 GTDAPEYYSGGLGNDDLDGEGGNDSLYGNSGNDTLDGGDGDDYLSG-------------- 108
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
Y + TIY GG D +L G N + S
Sbjct: 109 --------------YTGMDSIEGDSGDDTIYGGGGAD----SLEGDEGNDLISGGTGNDS 150
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G E N ++ ++ +SV G G+D + G + N+ +G+D+ G SG D+ +
Sbjct: 151 IEGDEGNDSLYGNSGHDSVEGGDGDDYISGYTGNDTLVGGAGDDMIVGGSGNDSIITNSG 210
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
++ I + + + + + + D +L+ + +
Sbjct: 211 DDTVYG-GSDDDFINAFSGNNLLNGGTGDDTISGGDGDDSIYGNSGDDVLDGRGGADYMS 269
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITF 399
G DV + G S F
Sbjct: 270 GYSGDDVLRAGGGDTLSGGSGADSFLF 296
Score = 45.5 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 45/290 (15%), Positives = 85/290 (29%), Gaps = 13/290 (4%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G + E + T D+ L +GG + + T++ G N
Sbjct: 18 RFGETASQTEETAALAAIAVTSDDNERSASLLAMALGGDGDDVWEGTDAPEYYSGGLGND 77
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ +S+ G+SGND + G ++ +G D +G SG DT + +
Sbjct: 78 DLDGEGGNDSLYGNSGNDTLDGGDGDDYLSGYTGMDSIEGDSGDDTIY--GGGGADSLEG 135
Query: 321 FENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
E ++ + + L + + L+ G D+
Sbjct: 136 DEGNDLISGGTGNDSIEGDEGNDSLYGNSGHDSVEGGDGDDYISGYTGNDTLVGGAGDDM 195
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ G D +Y GS DD N F + + +
Sbjct: 196 IVGGSGNDSIITNSG-----DDTVYGGSDDDFINAFSGNNLLN-----GGTGDDTISGGD 245
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
Y S +D+++ A + D G + + +L
Sbjct: 246 GDDSIYGNSGDDVLDGRGGADYMSGYSGDDVLRAGGGDTLSGGSGADSFL 295
>gi|86138775|ref|ZP_01057347.1| Hemolysin-type calcium-binding region, RTX [Roseobacter sp. MED193]
gi|85824422|gb|EAQ44625.1| Hemolysin-type calcium-binding region, RTX [Roseobacter sp. MED193]
Length = 411
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/365 (13%), Positives = 87/365 (23%), Gaps = 37/365 (10%)
Query: 91 TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD 150
S Y+ + +D + + + G A+ L + +
Sbjct: 5 VINDPSGYWTSNFVNSSDFASPTLTYRSATTLVISGSNGAAMTLTGNFTSSYYQIWTVNS 64
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
+S F + +D+ G A D + + G+ Y
Sbjct: 65 ISVSEYGVAKYTISDFSLRYWELDSKLGSSAMFTGDDSIISNMLAGSTY-----FTYGGN 119
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE- 269
TI G D + + L S+ + + + +IE
Sbjct: 120 DTINVGSGNDTINGGTGVDKVIIDDQFADAEISML--GSFLQVDSADGIDRLLSVELIEF 177
Query: 270 -------------------SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+V +D + S N+ SGND G SG DT
Sbjct: 178 QDKTISVQSGSSGTNILTGNVRSGVIDDFIFAGSGNDAVAGMSGNDTLWGQSGNDTI--Q 235
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
K++ + + +D L L +
Sbjct: 236 GNHGSDKLFGGDGNDSLLGG--TGRDLLVG------DLGDDLMKGGNGNDRLLGGVGRDT 287
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ +G D E G D + + + N A R G
Sbjct: 288 MFGDLGADRLFGRSGSDELIGGHGWDQLYGGKGHDTLNGQVGNDILHGGAGADRFVFHRG 347
Query: 431 VKEGR 435
+
Sbjct: 348 HGDDT 352
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 65/257 (25%), Gaps = 28/257 (10%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
M ++I +++ S N+ SGND +G +G+D
Sbjct: 92 GSSAMFTGDDSIISNMLAGS---TYFTYGGNDTINVGSGNDTINGGTGVDKVIIDDQFAD 148
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK------------------ 357
+I + + V + D L VE + F D+ I +
Sbjct: 149 AEISMLGSFLQV--DSADGIDRLLSVELIEFQDKTISVQSGSSGTNILTGNVRSGVIDDF 206
Query: 358 -----QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
+ + + L G D + + +G D DL
Sbjct: 207 IFAGSGNDAVAGMSGNDTLWGQSGNDTIQGNHGSDKLFGGDGNDSLLGGTGRDLLVGDLG 266
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ R G L + ++LI G D +
Sbjct: 267 DDLMKGGNGNDRLLGGVGRDTMFGDLGADRLFGRSGSDELIGGHGWDQLYGGKGHDTLNG 326
Query: 473 FGCEEGRFVTFDSYLYL 489
+ + ++
Sbjct: 327 QVGNDILHGGAGADRFV 343
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 80/264 (30%), Gaps = 20/264 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI---GHA 131
D + G + + + G+ K I A EI G
Sbjct: 98 TGDDSIISNMLAGSTYFTYGGNDTINVGSGNDTINGGTGVDKVIIDDQFADAEISMLGSF 157
Query: 132 LGLMHPGSYNGGYPVY-----GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
L + + V ++ S T++++ + + D F V+
Sbjct: 158 LQVDSADGIDRLLSVELIEFQDKTISVQSGSSGTNILTGNVRSGVIDDFIFAGSGNDAVA 217
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLL-----DLTLIGG 238
+ ++G GN+ + ++ G DLL D + GG
Sbjct: 218 GMSGNDTLWG----QSGNDTIQGNHGSDKLFGGDGNDSLLGGTGRDLLVGDLGDDLMKGG 273
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
N L ++ G + + + ++G G D + G ++ GND+
Sbjct: 274 NGNDRLLGGVGRDTMFGDLGADRLFGRSGSDELIGGHGWDQLYGGKGHDTLNGQVGNDIL 333
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFE 322
G +G D F ++ I F
Sbjct: 334 HGGAGADRFVFHRGHGDDTILDFA 357
>gi|332208026|ref|XP_003253097.1| PREDICTED: interstitial collagenase isoform 2 [Nomascus leucogenys]
Length = 403
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 54/185 (29%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 42 RWEQTHLTYRIENYTPDLPRADVD-------HAIEKAFKLWSNVTPLTFTKVSEGQADIM 94
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 95 ISFVRGDHQDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLYRVAA 151
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 152 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIG---PQT 208
Query: 183 PMVSD 187
P V D
Sbjct: 209 PKVCD 213
>gi|291390212|ref|XP_002711594.1| PREDICTED: matrix metalloproteinase 15 [Oryctolagus cuniculus]
Length = 668
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 57/212 (26%), Gaps = 56/212 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + WSN + + T + E R A W + L F+E
Sbjct: 127 LTGRKWSNNHLTFSIQNYTEKLGWYHS-------MEAVRRAFRVWEQATPLVFQEVPYED 179
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+
Sbjct: 180 IRLRRQREADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTSSST 239
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
G L A+HE+GHALGL H + + + D +N
Sbjct: 240 DLHGNSLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTDN------------------ 281
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
F D+ +Q++YG P G
Sbjct: 282 ---FQLPE----DDLRGIQQLYGTPDGQPQPT 306
>gi|313114034|ref|ZP_07799588.1| hypothetical protein HMPREF9436_01443 [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310623654|gb|EFQ07055.1| hypothetical protein HMPREF9436_01443 [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 337
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
+ Y + DL F D +HF N G +EGR S TFN Y + DL
Sbjct: 256 YDYQYYKEHNADLAALFGDNQWKY---LEHFVNSGMKEGRQGSSTFNLAAYKANNPDLVA 312
Query: 582 VFGSDRSAAAQHYITHGMKEGR 603
FG D + +HYI+ G EGR
Sbjct: 313 AFGDDNAKYYEHYISSGKAEGR 334
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLIN 538
+D Y DL +FG ++ H++ G+KEGR + F Y A++ DL+
Sbjct: 253 APVYDYQYYKEHNADLAALFGDNQWKYLEHFVNSGMKEGRQGSSTFNLAAYKANNPDLVA 312
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGR 563
AF D +H+ + G EGR
Sbjct: 313 AFGDDNAKY---YEHYISSGKAEGR 334
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDL 495
+ Y + DL F D +HF N G +EGR TF+ Y + DL
Sbjct: 254 PVYDYQYYKEHNADLAALFGDNQWKY---LEHFVNSGMKEGRQGSSTFNLAAYKANNPDL 310
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPD 522
FG D HYI+ G EGR
Sbjct: 311 VAAFGDDNAKYYEHYISSGKAEGRKAS 337
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLRNVF 415
Y DL + G + ++ ++HF G+ EGR TF+ Y + DL F
Sbjct: 255 VYDYQYYKEHNADLAALFGDNQWKYLEHFVNSGMKEGRQGSSTFNLAAYKANNPDLVAAF 314
Query: 416 GSDRGAAARHYITHGVKEGR 435
G D HYI+ G EGR
Sbjct: 315 GDDNAKYYEHYISSGKAEGR 334
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG-RNPDAFKALEYIASHEDLINA 455
+D Y DL +FG ++ H++ G+KEG + F Y A++ DL+ A
Sbjct: 254 PVYDYQYYKEHNADLAALFGDNQWKYLEHFVNSGMKEGRQGSSTFNLAAYKANNPDLVAA 313
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVT 482
F D +H+ + G EGR +
Sbjct: 314 FGDDNAKY---YEHYISSGKAEGRKAS 337
Score = 40.5 bits (93), Expect = 0.93, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
YAP Y Y+ Y+ NA + +++ +L E + ++ Y A+
Sbjct: 252 YAPVYDYQYYKEHNADLAALFGDNQWKYL---EHFVNSGMKEGRQGSSTFNLAAYKANNP 308
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGR 395
DL+ G D + +H+ G +EGR
Sbjct: 309 DLVAAFGDDNAKYYEHYISSGKAEGR 334
Score = 40.2 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
++ Y DL +FG ++ +H++ GMKEGR Q S NL+ +
Sbjct: 254 PVYDYQYYKEHNADLAALFGDNQWKYLEHFVNSGMKEGR-------QGSSTFNLAAYKAN 306
Query: 625 KADLSLSFDHKKVDLYTDYFGDG 647
DL +F Y Y G
Sbjct: 307 NPDLVAAFGDDNAKYYEHYISSG 329
>gi|56681798|gb|AAW21435.1| leukotoxin A [Pasteurellaceae bacterium I50]
Length = 394
Score = 65.6 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 72/228 (31%), Gaps = 22/228 (9%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
G G + + EI G G Y +D E + +V +
Sbjct: 121 NLGAGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEKGSYTVN--RFVET 178
Query: 171 SMMDASFGYCATPMVSDIVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
T +V + ++ +G K +G Y + K ++ I + +D
Sbjct: 179 GKALHEVTSTHTALVGNREEKIEYRHGNNKQHVG---YYTKDTLKA---VEEIIGTSHND 232
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + + G + TI + + + G G+D++ G + +
Sbjct: 233 IFKGSKF-------------DDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGGDFI 279
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
GND+ G G D F + I E + ++ + +D
Sbjct: 280 DGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDL 327
Score = 42.9 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 45/211 (21%), Gaps = 39/211 (18%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYA 311
+G+D V S G D S G + F
Sbjct: 120 ANLGAGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEKGSYTVNRFVETG 179
Query: 312 ------PSYLYKIYRFENAIIVYDANEHKQ-------DFLSDVERLRFADQCIDSVNVKQ 358
S + I Y +KQ D L VE + K
Sbjct: 180 KALHEVTSTHTALVGNREEKIEYRHGNNKQHVGYYTKDTLKAVEEIIGTSHNDIFKGSKF 239
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ + G D K G D G +DL + D
Sbjct: 240 DDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGGDFI-----DGGKGNDLLHGGKGD 294
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASH 449
H G + L + S+
Sbjct: 295 DI--FVHRQGDGNDSITESEGNDKLSFSDSN 323
>gi|330878914|gb|EGH13063.1| mannuronan C-5-epimerase [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 620
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 50/408 (12%), Positives = 107/408 (26%), Gaps = 25/408 (6%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL +S + ++ G+S +D ++G++ N++ G D G G
Sbjct: 211 DLGFRGDASDNNDPAAIFAGGQNEGGNIFGTSDDDTLVGSAGNDILDGDQGADDMTGGDG 270
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L ID ++++
Sbjct: 271 NDIYVVDNALDTVTESNDSPSQVDTVVSSVSWTLGANVENLLLTGVSAIDGTGNALKNVI 330
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+S L G D+ + + + + + + D +A
Sbjct: 331 TGNSSDNVLDGGAGGDLLKGGDGSDSYY------VDDVADRVVETNSDAWVGGVDTVYSA 384
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHED-LINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
Y E + D ++ A A L + ++
Sbjct: 385 LASYTLGANLENIAITRTDTANATGNALDNVLYAGAGDNVLDGRDGNDTVSYLFASAGVT 444
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI---ASHEDLIN 538
+ + GS G + + K + ++ L
Sbjct: 445 ------VALNTSAQQATGGSGLDTLKGTENLTGSQFADSLTGNKNANVLHGGDGNDTLSG 498
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
D + +G D + G FN D + +
Sbjct: 499 GAGDDVLIGGSGAD--TLIGGTGADRYVFNSID--EVGRDGLRDIINGFKVGEGDKLDFT 554
Query: 599 MKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ R L S F + N + + + +L LY + +
Sbjct: 555 GFDARPLTDSHDAFTFIGNSAFSANNTGELRF----ADGVLYGNVDDN 598
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 36/282 (12%), Positives = 83/282 (29%), Gaps = 16/282 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI--------GGYEKNM 260
+ G+D+ + + + ++ G +N+
Sbjct: 252 GNDILDGDQGADDMTGGDGNDIYVVDNALDTVTESNDSPSQVDTVVSSVSWTLGANVENL 311
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + I+ G++ +V+ GNS++NV +G D+ G G D+++ +
Sbjct: 312 LLTGVSAID-GTGNALKNVITGNSSDNVLDGGAGGDLLKGGDGSDSYYVDDVADRVVETN 370
Query: 321 FE---NAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + + +++E + ++ ++L A L G
Sbjct: 371 SDAWVGGVDTVYSALASYTLGANLENIAITRTDTANATGNALDNVLYAGAGDNVLDGRDG 430
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE-GR 435
D + F G++ + + D L+ A +
Sbjct: 431 NDTVSYL--FASAGVTVALNTSAQQATGGSGLDTLKGTENLTGSQFADSLTGNKNANVLH 488
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D L A + LI + G D + +E
Sbjct: 489 GGDGNDTLSGGAGDDVLIGGSGADTLIGGTGADRYVFNSIDE 530
>gi|56681802|gb|AAW21437.1| leukotoxin A [Pasteurellaceae bacterium I26]
Length = 385
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 74/228 (32%), Gaps = 22/228 (9%)
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
G G + + EI G G Y +D E + +V + +
Sbjct: 116 NLGAGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEKGSYTVNRF--VET 173
Query: 171 SMMDASFGYCATPMVSDIVA-VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
T +V + ++ +G K +G Y + K ++ I + +D
Sbjct: 174 GKALHEVTSTHTALVGNREEKIEYRHGNNKQHVG---YYTKDTLKA---VEEIIGTSHND 227
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + + G + TI + + + G G+D++ G + ++
Sbjct: 228 IFKGSKF-------------DDAFNGGDGVDTIDDNDGNDRLFGGKGDDIIDGGNGDDFI 274
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
GND+ G G D F + I E + ++ + +D
Sbjct: 275 DGGKGNDLLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDL 322
Score = 41.7 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 47/211 (22%), Gaps = 39/211 (18%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL-------------------DTFFYYA 311
+G+D V S G D S G + F
Sbjct: 115 ANLGAGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEKGSYTVNRFVETG 174
Query: 312 ------PSYLYKIYRFENAIIVYDANEHKQ-------DFLSDVERLRFADQCIDSVNVKQ 358
S + I Y +KQ D L VE + K
Sbjct: 175 KALHEVTSTHTALVGNREEKIEYRHGNNKQHVGYYTKDTLKAVEEIIGTSHNDIFKGSKF 234
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ + G D K G D ++ G +DL + D
Sbjct: 235 DDAFNGGDGVDTIDDNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKGD 289
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASH 449
H G + L + S+
Sbjct: 290 DI--FVHRQGDGNDSITESEGNDKLSFSDSN 318
>gi|291302210|ref|YP_003513488.1| hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
gi|290571430|gb|ADD44395.1| Hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
Length = 724
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 55/377 (14%), Positives = 93/377 (24%), Gaps = 59/377 (15%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
N + + + D ++ + D G GK TI G
Sbjct: 213 GTNLTLNSGKGDDEIDVDKSVDNNLTLATGDGKDTIT----------------DHDSKGN 256
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ D + + Y + + A ++ G G G
Sbjct: 257 RTFVTGEGDDTVATTGDNRNIYTEGGNDSVKAIGDKNNLAGGGGDDNIETTGGKVFGGDG 316
Query: 204 NNIYKIEVQQK-----DSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSI 253
N+ K IY GDD + + GG + I
Sbjct: 317 NDTIKAGDHDNPFYRDKPEHSTDIYGGAGDDKITGSDQNETIVGGGGDDEISGRGGTDII 376
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N I + +++ G G D + G ++ + ND G G D
Sbjct: 377 SGNKGNDEIYGNAGNDNIAGGDGRDYIDGQDGDDHITGGADNDTIYGLDGRDIM------ 430
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + D+L D + ++ + L
Sbjct: 431 ----------------SGDGGDDYLEG------GTGNDDINGGDGKDVVSGGRDNDFLEG 468
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITF--DSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D + EG D F D DD + G
Sbjct: 469 GKGDDTIYAGHGKDLIDAGEGTDKAFVQDEDYVDPDKDDKVQKVEVKDTSFID---VEGS 525
Query: 432 KEGRNPDAFKALEYIAS 448
+E ++ Y AS
Sbjct: 526 EEFKDRIRADLDMYGAS 542
>gi|313681718|ref|YP_004059456.1| hemolysin-type calcium-binding region [Sulfuricurvum kujiense DSM
16994]
gi|313154578|gb|ADR33256.1| Hemolysin-type calcium-binding region [Sulfuricurvum kujiense DSM
16994]
Length = 2393
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 48/125 (38%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+L + GG + I + + ++V + GND + + N+ F
Sbjct: 2145 NLIIRGGEGRNTIFTGDGHQDIMCGTDDDELHAGGGDDTVGSAGGNDRIFAEAGNDTVFG 2204
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+G+D G SG DT Y Y I R VY + + D + + E ++FAD
Sbjct: 2205 GTGDDFMHGGSGNDTVTYDGNRGDYVITRDNGKTYVYTVSTGETDTVVNAESIQFADAIY 2264
Query: 352 DSVNV 356
N
Sbjct: 2265 TITNN 2269
>gi|304393075|ref|ZP_07375004.1| bifunctional hemolysin/adenylate cyclase [Ahrensia sp. R2A130]
gi|303294840|gb|EFL89211.1| bifunctional hemolysin/adenylate cyclase [Ahrensia sp. R2A130]
Length = 1008
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 71/229 (31%), Gaps = 6/229 (2%)
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ 220
+V ++ + T M D A + ++ Y + + FI
Sbjct: 316 TVNGGAGDDIFVVPKTGLGGVTRMTFDGGADTDTLTFSNDDVDSSFYGLRGFT-GNSFID 374
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+ G LL + G + + D+ ++ G I+ V + G G D++
Sbjct: 375 LGLGAPGQALLQEIIAGPLGDVFDITLTGIENVIGTLGVDEISGSLVANKLEGRDGKDII 434
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI-----YRFENAIIVYDANEHKQ 335
G + ++V DV DG G DT YY I +
Sbjct: 435 FGRNGDDVLVGGKDADVLDGGEGFDTVSYYDSDGAVVIDLAAQTATGGDAESLGGVGILR 494
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
D LS E + + ++L + L + G D+ S
Sbjct: 495 DQLSGFESATGTEYNDTLLGDDGVNVLMGLGGNDRLEGLGGNDIIYSGD 543
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 49/185 (26%), Gaps = 5/185 (2%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGG-----VKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ G+D+ + G D+ S + Q
Sbjct: 734 GDLLDGGANNDLMVGGTGNDIYVVRDEGDVVFEEADEGDDIVDTYVSWDMSDHVEVLRMQ 793
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G+ D++ GNS N + G DV G +G D + E
Sbjct: 794 GSDDIASNGTEQRDLMFGNSGANYINGAGGADVMAGGAGNDVYTVENSYDAVVEASGEGY 853
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
VY ++ S++E + + L + G D +
Sbjct: 854 DNVYAKIDYIIPEDSEIESALLQGNAVVLRGSNSDNQLIGNDGVNIIDGRGGTDYMLGLG 913
Query: 385 HFYEF 389
F
Sbjct: 914 GNDIF 918
>gi|149204104|ref|ZP_01881072.1| 5'-nucleotidase [Roseovarius sp. TM1035]
gi|149142546|gb|EDM30591.1| 5'-nucleotidase [Roseovarius sp. TM1035]
Length = 415
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/339 (15%), Positives = 93/339 (27%), Gaps = 31/339 (9%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
S ++ G N + HT + + G G+DV++G S N+ F +G+D G +G+DT
Sbjct: 4 SNDTLFGSSGNDFLFAHTGSDFLDGGGGDDVLLGESGNDTFVGGNGSDTLIGGTGIDTAI 63
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI----------------- 351
A I E I++ + D +ER F DQ +
Sbjct: 64 INATFASAVITESEG-IVIISNQDGTTDEFQGIERFSFLDQVVLAEDLIPDPVVPDAIFN 122
Query: 352 ------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ + + L G D + S+G D+
Sbjct: 123 GTQAPEVILGTVGNDSIAAGGGDDTLAGDAGNDTIDGGAGNDRISASDGDDVVLGGSGND 182
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ N G L A ++ L +
Sbjct: 183 NIGGGVGNDTIDGGDGDDVMGAGFGDDSVSGGLGNDVLAGGAGNDTLSGGDGNDSMSGSF 242
Query: 466 GKDHFSNFGCEE--GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
G D + G D+ D + G D + +G
Sbjct: 243 GNDLIDAGSGADDIGGGTGRDAINAGAGNDRVGGGEGDDTIS-----GGNGNDFLAGGGR 297
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
++ ++ + + A D F + +G
Sbjct: 298 DDIIDGGTGNDTINGGAGNDVMTGGADADQFVFSAFFDG 336
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 58/188 (30%), Gaps = 6/188 (3%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ +I GGDD L + T+ GG N ++ + G N I +
Sbjct: 132 GTVGNDSIAAGGGDDTLAGDAGNDTIDGGAGNDRISASDGDDVVLGGSGNDNIGGGVGND 191
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G G+DV+ ++ GNDV G +G DT F N +I
Sbjct: 192 TIDGGDGDDVMGAGFGDDSVSGGLGNDVLAGGAGNDTL-SGGDGNDSMSGSFGNDLIDAG 250
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + + + + + + L D+ +
Sbjct: 251 SGADDIGGGTGRDAINAGAGNDRVGGGEGDDTISGGNGNDFLAGGGRDDIIDGGTGNDTI 310
Query: 390 GLSEGRDI 397
G D+
Sbjct: 311 NGGAGNDV 318
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/251 (14%), Positives = 67/251 (26%), Gaps = 7/251 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ TI G+D + + + + L +IGG N TI
Sbjct: 143 GGDDTLAGDAGNDTIDGGAGNDRISAS----DGDDVVLGGSGNDNIGGGVGNDTIDGGDG 198
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G+D V G N+V +GND G G D+ I A +
Sbjct: 199 DDVMGAGFGDDSVSGGLGNDVLAGGAGNDTLSGGDGNDSM--SGSFGNDLIDAGSGADDI 256
Query: 328 YDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ + +R+ + L + + G D
Sbjct: 257 GGGTGRDAINAGAGNDRVGGGEGDDTISGGNGNDFLAGGGRDDIIDGGTGNDTINGGAGN 316
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
D S + G D + + R + E + ++
Sbjct: 317 DVMTGGADADQFVFSAFFDGEADVITDFEDGLDSFFIRRFDPDTGVENISNGGNGLAGFV 376
Query: 447 ASHEDLINAFA 457
A+ + A
Sbjct: 377 AAMNIVDVAGG 387
>gi|148692668|gb|EDL24615.1| matrix metallopeptidase 19, isoform CRA_c [Mus musculus]
Length = 378
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 59/197 (29%), Gaps = 46/197 (23%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
+LL + +V +T L P + A WS V LTF E
Sbjct: 79 KYLLLGHWRKKNLTFRIFNVPSTLSL--------PRVRAALHQAFKYWSSVAPLTFREVK 130
Query: 75 IH-SDIKFISSNNGYVCTPRYDSRYF-----------MEINFDKADVWRYGIGKGTILSH 122
+DI+ + I+FDK ++W G +G L
Sbjct: 131 AGWADIRLSFHGRQSLYCSNTFDGPGKVLAHADIPELGSIHFDKDELWTEGTYQGVNLRI 190
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE+GHALGL H Y + + A +
Sbjct: 191 IAAHEVGHALGLGH--------------------------SRYTQALMAPVYAGYQPFFK 224
Query: 183 PMVSDIVAVQKIYGAPK 199
D+ +Q +YG
Sbjct: 225 LHPDDVAGIQALYGKRS 241
>gi|332969623|gb|EGK08641.1| iron-regulated protein FrpA [Kingella kingae ATCC 23330]
Length = 760
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 66/269 (24%), Gaps = 74/269 (27%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D G + + I Y N TI +++ GND + + N
Sbjct: 403 GTDGNDFLQGYGDDDTVHAGAG-NDHIETYNGNDTIYAGLGDDNIDAGGGNDRIYLETGN 461
Query: 287 NVFFESSGNDVF---------DGSSGLDTFFYYAPSYLYKIYRFEN-------------- 323
N + G+D +G G DT+ + + F
Sbjct: 462 NRAYGGDGDDTIVSGSLNDILEGGMGSDTYIFGKQFGQDTVLNFNPQHDKDVLKFTHTRL 521
Query: 324 ---------AIIVYDANEHKQDFLSD-----------VERLRFADQ-------------- 349
A ++ + +Q + + V+R+ FAD
Sbjct: 522 NDVTIHRNEADLLITQKDGQQVTVQNFFEKDGKGDYTVQRIEFADGKQLNTEQLRQWVIS 581
Query: 350 -------------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
L AS + L+ G D K+ G D
Sbjct: 582 PTRGDDKLYAYTDGGKLYGGNGNDTLIGNASIDYLVGNNGHDTLAGGKNDDRLEGGSGND 641
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
LG +D +
Sbjct: 642 TYL---FNLGDGNDRIYDSAGNDTLKLGS 667
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/270 (11%), Positives = 71/270 (26%), Gaps = 17/270 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D G T + ++ D G+G I + I L
Sbjct: 403 GTDGNDFLQGYGDDDTVHAGAGNDHIETYNGNDTIYAGLGDDNIDAGGGNDRIY----LE 458
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G + L M D ++ +
Sbjct: 459 TGNNRAYGGDGDDTIVSGSLNDILEGGMGSDTYIFGKQFGQDTVLNFNPQHDKDVLKFTH 518
Query: 196 GAPKG-----SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-------- 242
+ + + + Q+ + D GD + K
Sbjct: 519 TRLNDVTIHRNEADLLITQKDGQQVTVQNFFEKDGKGDYTVQRIEFADGKQLNTEQLRQW 578
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ T + Y + ++++G++ D ++GN+ ++ +D +G S
Sbjct: 579 VISPTRGDDKLYAYTDGGKLYGGNGNDTLIGNASIDYLVGNNGHDTLAGGKNDDRLEGGS 638
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G DT+ + +IY + +
Sbjct: 639 GNDTYLFNLGDGNDRIYDSAGNDTLKLGSG 668
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 87/279 (31%), Gaps = 23/279 (8%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+D G + I L + + G + N + + ++V +GND + + N+
Sbjct: 380 HIDAIEYDGGQ--ISLAEIKETLLRGTDGNDFLQGYGDDDTVHAGAGNDHIETYNGNDTI 437
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+ G+D D G D + + Y + + + + +E +D
Sbjct: 438 YAGLGDDNIDAGGGNDRIYLET--GNNRAYGGDGDDTIVSGSLNDI-----LEGGMGSDT 490
Query: 350 CIDSVNVKQRSILEYTASYE-DLIQVIGQDVFESMKHFYE----FGLSEGRDI---TFDS 401
I Q ++L + ++ D+++ + + H E +G+ + F
Sbjct: 491 YIFGKQFGQDTVLNFNPQHDKDVLKFTHTRLNDVTIHRNEADLLITQKDGQQVTVQNFFE 550
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYIT------HGVKEGRNPDAFKALEYIASHEDLINA 455
G Y R F + G + L ++ LI
Sbjct: 551 KDGKGDYTVQRIEFADGKQLNTEQLRQWVISPTRGDDKLYAYTDGGKLYGGNGNDTLIGN 610
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ + G D + ++ + YL + D
Sbjct: 611 ASIDYLVGNNGHDTLAGGKNDDRLEGGSGNDTYLFNLGD 649
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 64/232 (27%), Gaps = 45/232 (19%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI----- 325
VG G DV+ GN ++ S V +G +G D + + IY + +
Sbjct: 276 AVGLLGRDVLNGNGGDDRLIVGSATAVVNGGNGSDVYEFNKGFGATTIYNSDTSDKRHDV 335
Query: 326 --------------------IVYDANEHKQDFLSD----------VERLRFADQCIDSVN 355
I+ + E +S+ ++ + + I
Sbjct: 336 VRLNGVSKDAISYKRNGNDLIIRVSGEQNSITVSNMFAGDVLTQHIDAIEYDGGQISLAE 395
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ ++L T + L D + G D Y G DD +
Sbjct: 396 -IKETLLRGTDGNDFLQGYGDDDTVHAGAGNDHIETYNGNDTI-----YAGLGDDNIDAG 449
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
G + R Y+ G D + + ++ L +
Sbjct: 450 GGN----DRIYLETGNNRAYGGDGDDTIVSGSLNDILEGGMGSDTYIFGKQF 497
Score = 40.9 bits (94), Expect = 0.64, Method: Composition-based stats.
Identities = 37/296 (12%), Positives = 72/296 (24%), Gaps = 32/296 (10%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY---GV 149
R + D G G I ++N I LG + + G +Y G
Sbjct: 402 RGTDGNDFLQGYGDDDTVHAGAGNDHIETYNGNDTIYAGLGDDNIDAGGGNDRIYLETGN 461
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ Y D T V S Y + K L ++
Sbjct: 462 NRAYGGDGDDTIVSGSLNDILEGGMGSDTYIFGKQFGQDTVLNFNPQHDKDVLKFTHTRL 521
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + + D + G + N + VI
Sbjct: 522 NDVTIHRNEADLLITQKDGQQVTVQNFFEKDGKGDYTVQRIEFADGKQLNTEQLRQWVI- 580
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+D + + + +GND G++ +D
Sbjct: 581 --SPTRGDDKLYAYTDGGKLYGGNGNDTLIGNASIDYLV--------------------- 617
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ D L+ + D ++ + + + + G D +
Sbjct: 618 -GNNGHDTLAGGK----NDDRLEGGSGNDTYLFNLGDGNDRIYDSAGNDTLKLGSG 668
>gi|291222645|ref|XP_002731327.1| PREDICTED: GK21871-like [Saccoglossus kowalevskii]
Length = 535
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 61/197 (30%), Gaps = 44/197 (22%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L W + ++ ++D+ + + A WS V LTF+E +
Sbjct: 106 LAGSKWKKTDLTFRFLGY-----TYDMDK--QQQRAAIYEAFKRWSDVTPLTFKEVTSDE 158
Query: 77 SDIKFISSNNGYVCTP----RYDSRY--------FMEINFDKADVWRYGIGKGTILSHNA 124
+DI + + P +++FD + + G L A
Sbjct: 159 ADIYIEFATRIHSDGPLAAFDGPGGTLAHAYFPEHGDMHFDDDEYFTRFSKDGINLDGTA 218
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
LHE+GH+LGL H + +Y +
Sbjct: 219 LHELGHSLGLSHSNNKQAVMYPIYRKYEYYPN------------------------LQLS 254
Query: 185 VSDIVAVQKIYGAPKGS 201
DI+ +Q +YG +
Sbjct: 255 QDDIMGIQALYGQYSSN 271
>gi|281346656|gb|EFB22240.1| hypothetical protein PANDA_000051 [Ailuropoda melanoleuca]
Length = 617
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 47/161 (29%), Gaps = 31/161 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
L + W+N+ + + T + E R A W + L F+E
Sbjct: 81 LTGRKWTNHHLTFSIQNYTEKLGWYHSLE-------AVRRAFRVWEQATPLVFQEVPYED 133
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + D+ +
Sbjct: 134 IRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSST 193
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
G L A+HE+GHALGL H + + + D +
Sbjct: 194 DLHGNSLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTD 234
>gi|145219251|ref|YP_001129960.1| putative outer membrane adhesin like protein [Prosthecochloris
vibrioformis DSM 265]
gi|145205415|gb|ABP36458.1| putative outer membrane adhesin like protein [Chlorobium
phaeovibrioides DSM 265]
Length = 3679
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/331 (14%), Positives = 94/331 (28%), Gaps = 28/331 (8%)
Query: 10 TERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL- 68
E +AD +D+ ++ + + ++ IT N + S +
Sbjct: 1260 VEYLADGETKDETFTFNVLDSE-GGSVERTVTVRITGTNDEPVVDLKP-----SDATGID 1313
Query: 69 ---TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
TF E + D + + G +L +
Sbjct: 1314 NSATFIEVAGTDDGSAAVAFAAEGVNLSDIDSANLTSLTVSIASSTVESGDRLVLGSTVI 1373
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS--------- 176
G L + GS N G D+ S ++ + D
Sbjct: 1374 DLSGQGLDWLDGGSGNDLIISLGGDDRILGGSGDDQIVLATYDDTTGGDGRVLILLGGGE 1433
Query: 177 ----FGYCATPMVSDIVAVQKIY--GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL 230
DI A+ Y G + + + + T+ D+ +
Sbjct: 1434 DELITAVLDGAQGIDIEAIVGDYRMGDDSLNTEGLLDSENGTVDLADLMYTMKDTSDNV- 1492
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
++ G +I T++ + + I + + G+ G+D +IG ++ F
Sbjct: 1493 --GEVVYGGTAFIYSVTDADNVFLLGSGDDYIDGGAGDDYLRGADGSDYIIGGGGDDYLF 1550
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
G+D+ G SG D + + F
Sbjct: 1551 GGDGDDLLYGGSGTDGSDFISGGDGLGTAIF 1581
Score = 39.8 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 32/229 (13%), Positives = 64/229 (27%), Gaps = 59/229 (25%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV--------FF 290
IDL+ + + G N I + ++G SG+D ++ + ++
Sbjct: 1369 GSTVIDLSGQGLDWLDGGSGNDLIISLGGDDRILGGSGDDQIVLATYDDTTGGDGRVLIL 1428
Query: 291 ESSGND-----VFDGSSGLDT--------------------------------------- 306
G D V DG+ G+D
Sbjct: 1429 LGGGEDELITAVLDGAQGIDIEAIVGDYRMGDDSLNTEGLLDSENGTVDLADLMYTMKDT 1488
Query: 307 ------FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
Y +++Y + +N + + + + D + + LR AD +
Sbjct: 1489 SDNVGEVVYGGTAFIYSVTDADN-VFLLGSGDDYIDGGAGDDYLRGADGSDYIIGGGGDD 1547
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
L + L G D + + G + + Y + D
Sbjct: 1548 YLFGGDGDDLLYGGSGTDGSDFISGGDGLGTAIFIYTSQSGSDYFLTID 1596
Score = 39.4 bits (90), Expect = 1.8, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 2/91 (2%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
++ G I T + + G G+D+++G+ ++V G+D F G D
Sbjct: 3274 DDTLWGTALADVIDGLTGDDILYGEGGDDLLLGHEQDDVLMGGYGDDTFLAGDGDDIVSG 3333
Query: 310 YAPSYLYKIYRFENAIIV--YDANEHKQDFL 338
+Y F + Y +D +
Sbjct: 3334 GYGDDIYYADAFGDFTYTQNYVVGGEGKDTV 3364
>gi|537929|gb|AAA99983.1| matrilysin [Mus musculus]
gi|1098307|prf||2115376A matrilysin
Length = 264
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 68/215 (31%), Gaps = 52/215 (24%)
Query: 4 IKPVYTTERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGE 61
KP +A++ L W + + Y+ T+ + ++ + AL
Sbjct: 83 QKPRCGVPDVAEYSLMPNSPKWHSRIVTYRIVSYTSDLPRIVVD-------QIVKKALRM 135
Query: 62 WSKVVDLTFEETS-IHSDIKFIS---------------SNNGYVCTPRYDSRYFMEINFD 105
WS + L F+ S +DI + G+ P + +FD
Sbjct: 136 WSMQIPLNFKRVSWGTADIIIGFARRDHGDSFPFDGPGNTLGHAFAP--GPGLGGDAHFD 193
Query: 106 KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
K + W G A HE GH+LGL H S +VM
Sbjct: 194 KDEYWTDDEDAGVNFLFAATHEFGHSLGLSHS-------------------SVPGTVMY- 233
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
D S + T DI +QK+YG
Sbjct: 234 ---PTYQRDYSEDFSLTK--DDIAGIQKLYGKRNT 263
>gi|119484280|ref|ZP_01618897.1| probable aggregation factor core protein MAFp3, isoform C [Lyngbya
sp. PCC 8106]
gi|119457754|gb|EAW38877.1| probable aggregation factor core protein MAFp3, isoform C [Lyngbya
sp. PCC 8106]
Length = 1582
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 56/191 (29%), Gaps = 14/191 (7%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT----ESWSSIGGYEKNMTIAQHTVI 268
T D + ++ + LN+ SI G E N I
Sbjct: 36 INSLDNFLTNNDLQTFNTANIPSSDDTDLILSLNSFVPSLGSDSILGTEGNDMIFSLAGN 95
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G SGNDV+ GN N+ + G+D G DT ++ IV+
Sbjct: 96 DTIFGLSGNDVLGGNQDNDFLLGNKGDDTLYAGKGDDTL--TGGQNNDILFGDIGNDIVF 153
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ + K+ ++ + L +G D
Sbjct: 154 GD--------RGSDEVLGNSGDDVLYGGKENDLVAGGVGDDILFGDLGNDTLLGDLGSDT 205
Query: 389 FGLSEGRDITF 399
+G D F
Sbjct: 206 ITGGDGNDTFF 216
Score = 60.6 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 49/161 (30%), Gaps = 19/161 (11%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+++G N + + +I G N + + + ++G+ G+D + ++
Sbjct: 79 SILGTEGNDMIFSLAGNDTIFGLSGNDVLGGNQDNDFLLGNKGDDTLYAGKGDDTLTGGQ 138
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
ND+ G G D F ++ ++Y E+
Sbjct: 139 NNDILFGDIGNDIVF--GDRGSDEVLGNSGDDVLYGGKENDL-----------------V 179
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
IL + L+ +G D F L G
Sbjct: 180 AGGVGDDILFGDLGNDTLLGDLGSDTITGGDGNDTFFLGAG 220
Score = 58.3 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 63/193 (32%), Gaps = 12/193 (6%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
N + N +D + D+ G M+ + I+G
Sbjct: 42 FLTNNDLQTFNTANIPSSDDTDLILSLNSFVPSLGSDSILGTEGNDMIFSLAGNDTIFGL 101
Query: 198 PKGSLGNNIYKIEVQQK---DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTES 249
GN++ + T+Y GDD L + L G + N I
Sbjct: 102 ----SGNDVLGGNQDNDFLLGNKGDDTLYAGKGDDTLTGGQNNDILFGDIGNDIVFGDRG 157
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G + + + V G G+D++ G+ N+ G+D G G DTFF
Sbjct: 158 SDEVLGNSGDDVLYGGKENDLVAGGVGDDILFGDLGNDTLLGDLGSDTITGGDGNDTFFL 217
Query: 310 YAPSYLYKIYRFE 322
A + + + +
Sbjct: 218 GAGTGGFSLAEAD 230
>gi|118592169|ref|ZP_01549562.1| VCBS protein [Stappia aggregata IAM 12614]
gi|118435141|gb|EAV41789.1| VCBS protein [Stappia aggregata IAM 12614]
Length = 1473
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 55/145 (37%), Gaps = 7/145 (4%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLT--LIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
I + S D +D + +IDL + S GG I
Sbjct: 45 SGNDMLVGYGSIDILLGSDDVDTIDYSYLNDTENGIFIDLRSGIAVSKGGD-----IDLL 99
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ IE+ +G+ +DV++GN NN+FF + G+D+ DG G + +
Sbjct: 100 SSIENAIGTVNDDVMLGNGLNNIFFGNGGSDIIDGRGGNKDVAQFVGKAEDYDIKTNEDG 159
Query: 326 IVYDANEHKQDFLSDVERLRFADQC 350
V + L ++E ++F +
Sbjct: 160 SVSITKDGDTTTLYNIELVQFGEGS 184
Score = 40.9 bits (94), Expect = 0.61, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 60/208 (28%), Gaps = 10/208 (4%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ GS G D+V+ S N++ D+ GS +DT Y + + + +
Sbjct: 32 LNGSEGLDLVLARSGNDMLVGYGSIDILLGSDDVDTIDYSYLNDTENGIFIDLRSGIAVS 91
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D LS +E +++ ++ G D+ + +
Sbjct: 92 KGGDIDLLSSIE---------NAIGTVNDDVMLGNGLNNIFFGNGGSDIIDGRGGNKDVA 142
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK-ALEYIASH 449
G+ +D + + E + F + +H
Sbjct: 143 QFVGKAEDYDIKTNEDGSVSITKDGDTTTLYNIELVQFGEGSEVGDIHLFSVTDGALVAH 202
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEE 477
D I+ D F+ G ++
Sbjct: 203 NDAIDVTETTDDDESEVAATFNVLGNDD 230
>gi|255263402|ref|ZP_05342744.1| poly(beta-D-mannuronate) C5 epimerase 7 [Thalassiobium sp. R2A62]
gi|255105737|gb|EET48411.1| poly(beta-D-mannuronate) C5 epimerase 7 [Thalassiobium sp. R2A62]
Length = 968
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/351 (14%), Positives = 89/351 (25%), Gaps = 21/351 (5%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
N S M + D+ G G TIL + + G G
Sbjct: 566 NNQYVDATATSVGLMLDTANGNDIVLGGSGDDTILGGSGDDALNGGAGNNVIDGGEGVDT 625
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
+ + S + + + + + D G +
Sbjct: 626 IELAGSVANYTFETFSHIRIDDTETGLGGNNKASNFERLAFDEGEFAWQRGNNANNNLTA 685
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
T+ GDD+L N +
Sbjct: 686 SDDSGAIMVGLHGSDTMTGGDGDDVLIGDNGANFTW--------------KNGNDVLNGG 731
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-A 324
+ + G+ G+D + G + ++ +GN+V DG G+DT Y F +
Sbjct: 732 AGNDLLFGNGGDDALNGGAGDDALNGGAGNNVIDGGEGVDTIELAGSVANYTFETFSHIR 791
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCID--SVNVKQRSILEYTASYEDLIQVIGQDVFES 382
I + + S+ ERL F + N ++ S ++ + G D
Sbjct: 792 IDDTETGLGGNNKASNFERLAFDEGEFAWQRGNNANNNLTASDDSGAIMVGLHGSDTMTG 851
Query: 383 MKHFYEFGLSEGRDIT----FDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
G + T D D L G D +
Sbjct: 852 GDGDDVLIGDNGANFTWKNGNDVLNGGAGNDLLFGNGGDDTFVFEDGFGHD 902
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/356 (14%), Positives = 91/356 (25%), Gaps = 39/356 (10%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+ N + + + + + V+G SG+D ++G S ++
Sbjct: 551 NFETYAFSSNRANPVNNQYVDATATSVGLMLDTANGNDIVLGGSGDDTILGGSGDDALNG 610
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-AIIVYDANEHKQDFLSDVERLRFA--- 347
+GN+V DG G+DT Y F + I + + S+ ERL F
Sbjct: 611 GAGNNVIDGGEGVDTIELAGSVANYTFETFSHIRIDDTETGLGGNNKASNFERLAFDEGE 670
Query: 348 -----------------DQCIDSVNVKQRSILEYTASYEDLIQVIG--------QDVFES 382
D V + + + LI G DV
Sbjct: 671 FAWQRGNNANNNLTASDDSGAIMVGLHGSDTMTGGDGDDVLIGDNGANFTWKNGNDVLNG 730
Query: 383 MKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
+ G D D+ + + G D A + + +
Sbjct: 731 GAGNDLLFGNGGDDALNGGAGDDALNGGAGNNVIDGGEGVDTIELAGSVANYTFETFSHI 790
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ + N A D + +N + + D
Sbjct: 791 RIDDTETGLGGNNKASNFERLAFDEGEFAWQRGNNANNNLTASDDSGAIMVGLHGSDTMT 850
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
D + K G L A ++ L D + + G H
Sbjct: 851 GGDGDDVLIGDNGANFTWKNG-----NDVLNGGAGNDLLFGNGGDDTFVFEDGFGH 901
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/226 (16%), Positives = 66/226 (29%), Gaps = 9/226 (3%)
Query: 202 LGNNIYKIEV---QQKDSPFIQTIYDSGGDDLLDLTLIG----GVKNYIDLNTESWSSIG 254
G++I + G DL++ G + + IG
Sbjct: 152 AGDDIIAGNSGADTINAGAGQDFVKGGVGSDLINGGDGSDYLVGDHSDSNEYQTLADRIG 211
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N TI + + V G+ GND + G+ ++V SGND DG +G D F +
Sbjct: 212 GDTWNDTINGGSGNDFVFGNQGNDELNGDEGDDVIEGGSGNDTMDGGTGDDLFTFEGGFG 271
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + + + + + +D+ S
Sbjct: 272 VDTVDGGADNDTLDLSQVQADMTVGGTNIWGTSDRSATDDAGN-TVTFNGIESIVTGGGD 330
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ G D+ F+ + G D+ G D
Sbjct: 331 DDYQGGYVRHEINSIDMGSGDDL-FNLATFDGISLDIDAGAGDDTV 375
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 23/183 (12%), Positives = 44/183 (24%), Gaps = 11/183 (6%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + G+SG D + + + G+D+ +G G D ++
Sbjct: 152 AGDDIIAGNSGADTINAGAGQDFVKGGVGSDLINGGDGSDYLVGDHS---------DSNE 202
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
A+ D +D + + L + + G D +
Sbjct: 203 YQTLADRIGGDTWNDT--INGGSGNDFVFGNQGNDELNGDEGDDVIEGGSGNDTMDGGTG 260
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
F G + DL V + T +
Sbjct: 261 DDLFTFEGGFGVDTVDGGADNDTLDLSQVQADMTVGGTNIWGTSDRSATDDAGNTVTFNG 320
Query: 446 IAS 448
I S
Sbjct: 321 IES 323
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 42/246 (17%), Positives = 81/246 (32%), Gaps = 6/246 (2%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
NN D + + +D G G ++ N G G
Sbjct: 676 GNNANNNLTASDDSGAIMVGLHGSDTMTGGDGDDVLIGDNG-ANFTWKNGNDVLNGGAGN 734
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
++G D + ++++D G T ++ VA +
Sbjct: 735 DLLFGNGGDDALNGGAGDDALNGGAGNNVIDGGEGV-DTIELAGSVANYTFETFSHIRID 793
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + K S F + +D G N + + +S + + G + T+
Sbjct: 794 DTETGLGGNNKASNFERLAFDEG---EFAWQRGNNANNNLTASDDSGAIMVGLHGSDTMT 850
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ ++G +G + N N+V +GND+ G+ G DTF + I FE+
Sbjct: 851 GGDGDDVLIGDNGANFTWKN-GNDVLNGGAGNDLLFGNGGDDTFVFEDGFGHDIIGDFEH 909
Query: 324 AIIVYD 329
+ V +
Sbjct: 910 GVDVIN 915
Score = 40.5 bits (93), Expect = 0.97, Method: Composition-based stats.
Identities = 56/507 (11%), Positives = 126/507 (24%), Gaps = 42/507 (8%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
+D+ +N + F+ + G G HEI ++ +
Sbjct: 291 ADMTVGGTNIWGTSDRSATDDAGNTVTFNGIESIVTGGGDDDYQGGYVRHEIN-SIDMGS 349
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
G+ D + + +V G+ D++ ++
Sbjct: 350 GDDLFNLATFDGISLDIDAGAGDDTVWIGGRMGTGFAGLMNGHVDGGGGDDVLVMEG--E 407
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ V ++TI GDD + + I I + + + G
Sbjct: 408 LDDLTFSKTQVTDGVNTVTFSGVETIRSGRGDDTFE-SYIHRDVTSILMGDGNDTYNGLT 466
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY------- 309
+ + G+D+V + DG +G+DT
Sbjct: 467 MLGQRL-------HIDAGKGDDLVQIGGHPGSGGTGVFDGHADGGAGVDTLQLGLMARGE 519
Query: 310 -YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA------------DQCIDSVN- 355
L + + Y E + S+ E F+ D SV
Sbjct: 520 HGDALSLTINADGTSGTVGYLDGEAVEATFSNFETYAFSSNRANPVNNQYVDATATSVGL 579
Query: 356 ----VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT---FDSYLYLGSY 408
I+ + + ++ G D EG D Y
Sbjct: 580 MLDTANGNDIVLGGSGDDTILGGSGDDALNGGAGNNVIDGGEGVDTIELAGSVANYTFET 639
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
+ ++ G + ++ + + F ++ +L + +V +
Sbjct: 640 FSHIRIDDTETGLGGNNKASNFERLAFDEGEFAWQRGNNANNNLTASDDSGAIMVGLHGS 699
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
G + + + + + G+ + G AL
Sbjct: 700 DTMTGGDGDDVLIGDNGANFTWKNGNDVLNGGAGNDLL---FGNGGDDALNGGAGDDALN 756
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFS 555
A + + + +++
Sbjct: 757 GGAGNNVIDGGEGVDTIELAGSVANYT 783
>gi|108805305|ref|YP_645242.1| hemolysin-type calcium-binding region [Rubrobacter xylanophilus DSM
9941]
gi|108766548|gb|ABG05430.1| Hemolysin-type calcium-binding region [Rubrobacter xylanophilus DSM
9941]
Length = 865
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 44/165 (26%), Gaps = 19/165 (11%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN------------DVFD 299
+I G + T+ + + G GNDV+ G N+ +G+ D
Sbjct: 54 TISGTAGSDTLTGTARADVICGLGGNDVIKGLGGNDQLKGGAGSDTFVASTTADGADTIV 113
Query: 300 GSSGLDTFFYYAPSYLYKIY-------RFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
G SG DT Y A + + + S +RL +
Sbjct: 114 GGSGKDTASYAARTGAVAVTLDGKANDGATGEGDNVGGDVENVTSGSGADRLSGSALGNR 173
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ L + L G D G D
Sbjct: 174 LDSGAGNDALSGLDGDDLLFAGYGNDSLRGGPGTDRCDPGLGTDT 218
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 43/154 (27%), Gaps = 15/154 (9%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI------DLNTES 249
G G V + TI G D G D T
Sbjct: 86 GGNDQLKGGAGSDTFVASTTADGADTIVGGSGKDTASYAARTGAVAVTLDGKANDGATGE 145
Query: 250 WSSIGGYEKNMT-------IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
++GG +N+T ++ + + +GND + G +++ F GND G
Sbjct: 146 GDNVGGDVENVTSGSGADRLSGSALGNRLDSGAGNDALSGLDGDDLLFAGYGNDSLRGGP 205
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
G D E +V D
Sbjct: 206 GTDR--CDPGLGTDTASECEPFDVVRLTGTIGAD 237
Score = 40.2 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 16/158 (10%), Positives = 35/158 (22%), Gaps = 10/158 (6%)
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES---MK 384
+ D L+ + + +++ + L G D F +
Sbjct: 54 TISGTAGSDTLTG------TARADVICGLGGNDVIKGLGGNDQLKGGAGSDTFVASTTAD 107
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G+D G+ + +D + V+ + L
Sbjct: 108 GADTIVGGSGKDTA-SYAARTGAVAVTLDGKANDGATGEGDNVGGDVENVTSGSGADRLS 166
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
A L + + G D +
Sbjct: 167 GSALGNRLDSGAGNDALSGLDGDDLLFAGYGNDSLRGG 204
>gi|416552|emb|CAA46638.1| hatching enzyme [Paracentrotus lividus]
Length = 587
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 70/188 (37%), Gaps = 40/188 (21%)
Query: 26 YFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS--DIKFIS 83
+ R +P + L+ D+ + +A++ R A W V L+F E + DI+
Sbjct: 173 TWSRNQPVTYSFGALTSDLNQ--NDAKDEIRRAFRVWDDVSGLSFREVPDTTSVDIRIKF 230
Query: 84 SNNGYVCTPRYDSRYF----------MEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + +D R + +FD ++ W G GT L A HE GH+LG
Sbjct: 231 GSYDHGDGISFDGRGGVLAHAFLPRNGDAHFDDSETWTIGTRSGTNLFQVAAHEFGHSLG 290
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H S + S + Y Q + + DI ++
Sbjct: 291 LYH--------------------STVRSALMYPYYQGYVPNFRLDS------DDIAGIRS 324
Query: 194 IYGAPKGS 201
+YG+ GS
Sbjct: 325 LYGSNSGS 332
>gi|119494032|ref|ZP_01624588.1| L-sorbosone dehydrogenase [Lyngbya sp. PCC 8106]
gi|119452225|gb|EAW33425.1| L-sorbosone dehydrogenase [Lyngbya sp. PCC 8106]
Length = 617
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 15/212 (7%)
Query: 172 MMDASFGYCATPMVSDIVA--VQKIYGAPKGSLGNNIYKIEVQ---QKDSPFIQTIYDSG 226
D + + P + I A + + G +G G++ + TI +
Sbjct: 5 NPDGFYDLTSNPDIFQIQADLLTNLPGGLRGKRGDDRIIGSEVAEIINGNQNNDTIAGNQ 64
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+D L GG + + E + G + + ++ +++ G ND++ G+ N
Sbjct: 65 GNDTL----FGGKDSDVLSGEEGEDQLFGNLGDDQLLGNSGNDTLWGGKQNDILTGDEGN 120
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYA--PSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ G D G G D F F + D L+ VE L
Sbjct: 121 DWLSGDFGQDTLSGGEGEDIFVLGQDLSRTNITTSDFIEDFEIGLDQIALTDSLT-VENL 179
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
R + +++ ++ E L V G
Sbjct: 180 RLE---TVMIGEIIATLIAVESTGEALATVSG 208
Score = 39.8 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 40/140 (28%), Gaps = 17/140 (12%)
Query: 336 DFLSDVER-LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D L+++ LR + + I+ + + + G D K EG
Sbjct: 24 DLLTNLPGGLRGKRGDDRIIGSEVAEIINGNQNNDTIAGNQGNDTLFGGKDSDVLSGEEG 83
Query: 395 RDITF--------------DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
D F D+ D L G+D + + + G D F
Sbjct: 84 EDQLFGNLGDDQLLGNSGNDTLWGGKQNDILTGDEGNDWLSG--DFGQDTLSGGEGEDIF 141
Query: 441 KALEYIASHEDLINAFADAP 460
+ ++ + F +
Sbjct: 142 VLGQDLSRTNITTSDFIEDF 161
>gi|85703935|ref|ZP_01035038.1| hypothetical protein ROS217_13091 [Roseovarius sp. 217]
gi|85671255|gb|EAQ26113.1| hypothetical protein ROS217_13091 [Roseovarius sp. 217]
Length = 1030
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 70/248 (28%), Gaps = 27/248 (10%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
L L L G + + I G N I+ +SV G +G+D + G ++
Sbjct: 723 LGLDLSGTPGADSLVGGDGNDVIRGLGGNDDISGGLGFDSVFGEAGDDTLSGGDGDDALA 782
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--------------ENAIIVYDANEHKQD 336
+ GND+ +G SG D A D
Sbjct: 783 GADGNDIVNGGSGNDNIGGGQGDDTIDGDDGDDIIGAGFGNDTVMGGNGNDVVAGGAGND 842
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
LS E + +D+ G+D ++ G EG D
Sbjct: 843 TLSGGE------GNDSMSGSFGDDNIIAGGGADDIGGGTGRDTIDAGAGNDRVGGGEGND 896
Query: 397 ITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
F D G D + G+D A G + F A A D
Sbjct: 897 SIFGGDGNDFLAGGGRDDVIDGGAGNDTINAGAGNDQITGGAGADQFVFSAFT--AGEAD 954
Query: 452 LINAFADA 459
+I F D
Sbjct: 955 VITDFEDG 962
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 74/267 (27%), Gaps = 8/267 (2%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
SD S + T + AD G G I +I LG
Sbjct: 703 SDGFGTSESLTSAATAPVEDLGLDLSGTPGADSLVGGDGNDVIRGLGGNDDISGGLGFDS 762
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
G + G D D + + + + G + +G
Sbjct: 763 VFGEAGDDTLSGGDGDDALAGADGNDIVNGGSGNDNIGGGQGDDTIDGDDGDDIIGAGFG 822
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
GN T+ G+D ++ G + + IGG
Sbjct: 823 NDTVMGGN----GNDVVAGGAGNDTLSGGEGND----SMSGSFGDDNIIAGGGADDIGGG 874
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
TI + V G GND + G N+ +DV DG +G DT A +
Sbjct: 875 TGRDTIDAGAGNDRVGGGEGNDSIFGGDGNDFLAGGGRDDVIDGGAGNDTINAGAGNDQI 934
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVER 343
+ + + D ++D E
Sbjct: 935 TGGAGADQFVFSAFTAGEADVITDFED 961
Score = 42.9 bits (99), Expect = 0.16, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 54/248 (21%), Gaps = 10/248 (4%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
D +D L + + + G D F G D
Sbjct: 722 DLGLDLSGTPGADSLVGGDGNDVIRGLGGNDDISGGLGFDSVFGEAGDDTLSGGDGDDAL 781
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
N + G D + ++ ++ + G
Sbjct: 782 AGADGNDIVNGGSGNDNIGGGQGDDTIDGDDGDDIIGAGFGNDTVMGGNGNDVVAGGAGN 841
Query: 468 DHFSNFGCEEGRFVTFDSYL--YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN----P 521
D S + +F G DD+ G D A G EG +
Sbjct: 842 DTLSGGEGNDSMSGSFGDDNIIAGGGADDIGGGTGRDTIDAGAGNDRVGGGEGNDSIFGG 901
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWN 581
D L + + + AG D G F+ + D+
Sbjct: 902 DGNDFLAGGGRDDVIDGGAGNDTINAGAGND--QITGGAGADQFVFSA--FTAGEADVIT 957
Query: 582 VFGSDRSA 589
F
Sbjct: 958 DFEDGLDR 965
>gi|149633277|ref|XP_001509994.1| PREDICTED: similar to matrix metallopeptidase 8 (neutrophil
collagenase) [Ornithorhynchus anatinus]
Length = 629
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 60/199 (30%), Gaps = 51/199 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVA-RWALGEWSKVVDLTFEETSIHS---- 77
W + + Y+ I++++ + A + A WS LTF + +
Sbjct: 106 WKSNALTYRILNY--------ISDMSQADTDEAFKKAFQLWSNASPLTFSKINEGDADIM 157
Query: 78 ----------DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ F NN + + +FD + W G KG L A HE
Sbjct: 158 IYFARRDHGDNSPFDGPNNILAHAFQPGRGIGGDAHFDADETWTKG-SKGYNLFLVAAHE 216
Query: 128 IGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
GH+LGL H +P Y S +
Sbjct: 217 FGHSLGLSHSTEPGALMFPTYA--------------------------FSDPKTFSLSQD 250
Query: 187 DIVAVQKIYGAPKGSLGNN 205
DI +Q IYG S+
Sbjct: 251 DINGIQSIYGLSPNSVQPT 269
>gi|148556011|ref|YP_001263593.1| hemolysin-type calcium-binding protein [Sphingomonas wittichii RW1]
gi|148501201|gb|ABQ69455.1| Hemolysin-type calcium-binding region [Sphingomonas wittichii RW1]
Length = 375
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 59/208 (28%), Gaps = 22/208 (10%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK------NYIDLNTESWSSIGGY 256
G IY + G+D + L G + ++ ++ G
Sbjct: 74 GTTIYTQNGSFAMDATLLKPALMRGEDPVKFLLPGADDLHGSEGDDFIVDPAGHNNFYGG 133
Query: 257 EKNMTIAQHTVIESVVGSS------GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
N TI+ + + G S G+D + N ++G+D SG D
Sbjct: 134 GGNDTISAGAGNDHIYGRSAAGGDDGDDQIWAGDGANYVQGNAGDDEILAGSGPDRI--Q 191
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +I + IV + +R + ++E +
Sbjct: 192 GGAGNDRIQAGDGNNIVNGN--------RGDDEIRAGYGDDLLRGGQGNDLIEGFVGNDT 243
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDIT 398
L+ +G D + F G
Sbjct: 244 LMGDLGADYLIGGEGNDLFVFGPGTSTI 271
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 45/140 (32%), Gaps = 5/140 (3%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-----IYRF 321
+ + GS G+D ++ + +N F+ GND +G D + + +
Sbjct: 108 GADDLHGSEGDDFIVDPAGHNNFYGGGGNDTISAGAGNDHIYGRSAAGGDDGDDQIWAGD 167
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ +A + + S +R++ +I+ +++ G D+
Sbjct: 168 GANYVQGNAGDDEILAGSGPDRIQGGAGNDRIQAGDGNNIVNGNRGDDEIRAGYGDDLLR 227
Query: 382 SMKHFYEFGLSEGRDITFDS 401
+ G D
Sbjct: 228 GGQGNDLIEGFVGNDTLMGD 247
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 37/137 (27%), Gaps = 6/137 (4%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GN+ I+ G + + G + L I G
Sbjct: 140 SAGAGNDHIYGRSAAGGDDGDDQIWAGDGANYV----QGNAGDDEILAGSGPDRIQGGAG 195
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I V G+ G+D + +++ GND+ +G G DT +
Sbjct: 196 NDRIQAGDGNNIVNGNRGDDEIRAGYGDDLLRGGQGNDLIEGFVGNDTLM--GDLGADYL 253
Query: 319 YRFENAIIVYDANEHKQ 335
E +
Sbjct: 254 IGGEGNDLFVFGPGTST 270
Score = 44.0 bits (102), Expect = 0.075, Method: Composition-based stats.
Identities = 30/211 (14%), Positives = 57/211 (27%), Gaps = 7/211 (3%)
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI 219
+ Y + D Q G + N + +
Sbjct: 130 FYGGGGNDTISAGAGNDHIYGRSAAGGDDGDDQIWAGDGANYVQGNA--GDDEILAGSGP 187
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
I G+D + G N I I + + + + G GND
Sbjct: 188 DRIQGGAGNDRI----QAGDGNNIVNGNRGDDEIRAGYGDDLLRGGQGNDLIEGFVGNDT 243
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFL 338
++G+ + GND+F G T +I FE + + L
Sbjct: 244 LMGDLGADYLIGGEGNDLFVFGPGTSTIASVVDEVTDRIADFERGIDHIDLGFHVEALLL 303
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ AD I++ +++ +
Sbjct: 304 GEIRSPLSADHTIENARAVAQALFDAHPGRN 334
>gi|194207129|ref|XP_001495153.2| PREDICTED: matrix metalloproteinase 14 [Equus caballus]
Length = 756
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 288 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 340
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 341 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 400
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 401 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 442
>gi|157688258|gb|ABQ02446.1| enterohemolysin [Escherichia coli]
Length = 998
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 34/216 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 720 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 775
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 776 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYR 835
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 836 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKPINGVLSFNESND 889
Query: 370 D----LIQVIGQDVFESMKHFYE-FGLSEGRDITFD 400
+D + H E +GR+I D
Sbjct: 890 VNGITFKNWFAKDASGADNHLVEVITDKDGREIKVD 925
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 46/164 (28%), Gaps = 19/164 (11%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G I +E ++G +D G N++F + GND +G+ G D +
Sbjct: 685 FEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLY- 743
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + ++ + D LS D L+ +Y
Sbjct: 744 -GDDGDDYISGGQGDDQLFGGS--GNDKLSG------GDGNNYLTGGSGNDELQAHGAYN 794
Query: 370 DLIQVIGQDVFE---------SMKHFYEFGLSEGRDITFDSYLY 404
L G D + G DI Y
Sbjct: 795 ILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNY 838
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 56/197 (28%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 796
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + + H ++ G + R
Sbjct: 797 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLS 856
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 857 DISFDDIAFKRVGNDLI 873
>gi|148232353|ref|NP_001087105.1| matrix metallopeptidase 24 (membrane-inserted) [Xenopus laevis]
gi|50414961|gb|AAH77870.1| Mmp24-prov protein [Xenopus laevis]
Length = 576
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 48/193 (24%), Gaps = 36/193 (18%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + + E R A W V L F+E
Sbjct: 105 IQGLKWQHKDITFCIQNYTPKIGEY-------STHEAIRRAFKVWESVTPLRFQEVRYVD 157
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + R
Sbjct: 158 IQDGYTKHADIMLFFAEGFHGDSTPFDGEGGFLAHAYFPGTGIGGDTHFDSAEPWTARNE 217
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN-----DSFLTSVMSYFMP 168
+G L A+HE+GHALGL H + + D N D Y
Sbjct: 218 DLEGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTTNFQLPDDDRRGIQQLYGPN 277
Query: 169 QDSMMDASFGYCA 181
Y
Sbjct: 278 HGEGPPTRAPYPT 290
>gi|21305108|gb|AAM45569.1| AqxA [Actinobacillus equuli]
Length = 987
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 32/97 (32%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G I ++ + G ++ I + + + G +GND + G N+ GND
Sbjct: 735 GTKNQDIFKGSKFNDTFFGGDEKDIIYGNAGNDRLFGGNGNDEIDGGDGNDFIDGGKGND 794
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G G D + + I + +
Sbjct: 795 SLTGGYGNDIYVIHKEDGQDFITELGGDDRLVFTDTE 831
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 39/97 (40%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G + N T + + G++GND + G + N+ GND DG G D+
Sbjct: 740 DIFKGSKFNDTFFGGDEKDIIYGNAGNDRLFGGNGNDEIDGGDGNDFIDGGKGNDSLTGG 799
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ +Y I++ + + + + +D E R
Sbjct: 800 YGNDIYVIHKEDGQDFITELGGDDRLVFTDTELSRLT 836
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 55/188 (29%), Gaps = 26/188 (13%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
IY + G+D L G N I
Sbjct: 747 FNDTFFGGDEKDIIYGNAGNDRL----------------------FGGNGNDEIDGGDGN 784
Query: 269 ESVVGSSGNDVVIGNSANN--VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G GND + G N+ V + G D G D + ++ + ++
Sbjct: 785 DFIDGGKGNDSLTGGYGNDIYVIHKEDGQDFITELGGDDRLVFTDTELSRLTFKRDKKVL 844
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ + + H + F DQ + +S L+ E++I G +
Sbjct: 845 IIEDSAHNNQ--VRISDWFFKDQATLNKEYHAQSALDKDYRIEEIIDKNGTRITADQIDT 902
Query: 387 YEFGLSEG 394
G SEG
Sbjct: 903 ILNGKSEG 910
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 21/216 (9%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
GDD + +G ID + + I+ + + V G+
Sbjct: 627 GKGDDTV---FVGWGSTDIDGSEGYDRAAYNRLDGEAHIYGLNID-----AQQETVAGSY 678
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI--YRFENAIIVYDANEHKQDFLSDVE 342
N G++ + + + ++ + + D L +VE
Sbjct: 679 TVNRTIG-------RGAAKHEVIKVHQATAGKRVDKIEYRQGESRFHNELKVVDKLVNVE 731
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+ K + + G D E +G D
Sbjct: 732 EIIGTKNQDIFKGSKFNDTFFGGDEKDIIYGNAGNDRLFGGNGNDEIDGGDGNDFIDGGK 791
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
D L +G+D + + E D
Sbjct: 792 G----NDSLTGGYGNDIYVIHKEDGQDFITELGGDD 823
>gi|329848368|ref|ZP_08263396.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843431|gb|EGF93000.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 453
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 60/247 (24%), Gaps = 9/247 (3%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + G V + G + N I + + G +G+D + G S N+
Sbjct: 32 DNLITGSVLADQIYGRGGNDVLDGGDGNDLIDGGNDHDVLYGGAGHDSLYGGSGNDNLIG 91
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+G+D G G D Y + + D L+ +E + +D
Sbjct: 92 GAGDDQLYGGQGQDWATYTGGAAIVANLNTG------LVTGQGSDTLNGIENIMGSDFAD 145
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ L + + G D + ++
Sbjct: 146 ILQGNASANKLHGGGGDDRFVVSYGYDELVGGTGTDVLDFINAGPVQVSLLQGTYYMNNN 205
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ + R + ++ + L G D +
Sbjct: 206 NAGTATGFEDILGG---NSNDLLRGDNGANRIDGRGGQDTLDGQGGADVLTASGGHDSLT 262
Query: 472 NFGCEEG 478
+
Sbjct: 263 GGAGNDS 269
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/231 (16%), Positives = 64/231 (27%), Gaps = 24/231 (10%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+Y G D T + +LNT + G N
Sbjct: 84 SGNDNLIGGAGDDQLYGGQGQDWATYTGGAAIVA--NLNTGLVTGQGSDTLN-------G 134
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYAP-----S 313
IE+++GS D++ GN++ N G+D G +G D + S
Sbjct: 135 IENIMGSDFADILQGNASANKLHGGGGDDRFVVSYGYDELVGGTGTDVLDFINAGPVQVS 194
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
L Y N + + LR + + L+ + L
Sbjct: 195 LLQGTYYMNNNNAGTATGFEDILGGNSNDLLRGDNGANRIDGRGGQDTLDGQGGADVLTA 254
Query: 374 VIGQDVFESMKHFYEF-GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
G D F + +I + DL + F + +A
Sbjct: 255 SGGHDSLTGGAGNDSFVIAASSGNIVISDFTQGSDVIDLSHYFDQNGQSAV 305
Score = 45.9 bits (107), Expect = 0.019, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 69/274 (25%), Gaps = 38/274 (13%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ D + + + D G G +
Sbjct: 50 NDVLDGGDGNDLIDGGNDHDVLYGGAGHDSLYGGSGNDNLIGGAGDDQLYGG-------- 101
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+ G ++ L + Q S +DI
Sbjct: 102 -------QGQDWATYTGGAAIVANLNTGLVT------GQGSDTLNGIENIMGSDFADI-- 146
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID------ 244
+Q A K G + + S + G D+LD G V+ +
Sbjct: 147 LQGNASANKLHGG----GGDDRFVVSYGYDELVGGTGTDVLDFINAGPVQVSLLQGTYYM 202
Query: 245 -----LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ I G N + + G G D + G +V S G+D
Sbjct: 203 NNNNAGTATGFEDILGGNSNDLLRGDNGANRIDGRGGQDTLDGQGGADVLTASGGHDSLT 262
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G +G D+F A S I F V D + +
Sbjct: 263 GGAGNDSFVIAASSGNIVISDFTQGSDVIDLSHY 296
>gi|218532895|ref|YP_002423711.1| Hemolysin-type calcium-binding region [Methylobacterium
chloromethanicum CM4]
gi|218525198|gb|ACK85783.1| Hemolysin-type calcium-binding region [Methylobacterium
chloromethanicum CM4]
Length = 763
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 2/106 (1%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + A + + G G+D + G + N+ +G D +G G+D S
Sbjct: 218 GNRADTFFAYG-GDDWIDGGWGDDKLFGGAGNDTLIGGNGGDTLEGGEGIDRAVLTGRSQ 276
Query: 315 LY-KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
Y +Y ++ + D LS +E L F D + +
Sbjct: 277 DYVALYGAAGSLAIKHLGSGSIDTLSSIETLNFDDTVLGMSGLLAH 322
Score = 37.8 bits (86), Expect = 5.2, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 21/80 (26%), Gaps = 4/80 (5%)
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
++ ++ + L G D EG D +
Sbjct: 217 LGNRADTFFAYGGDDWIDGGWGDDKLFGGAGNDTLIGGNGGDTLEGGEG----IDRAVLT 272
Query: 406 GSYDDLRNVFGSDRGAAARH 425
G D ++G+ A +H
Sbjct: 273 GRSQDYVALYGAAGSLAIKH 292
>gi|75677470|ref|NP_001028511.1| matrix metalloproteinase-25 precursor [Mus musculus]
gi|123796969|sp|Q3U435|MMP25_MOUSE RecName: Full=Matrix metalloproteinase-25; Short=MMP-25; Flags:
Precursor
gi|74181785|dbj|BAE32600.1| unnamed protein product [Mus musculus]
gi|109730167|gb|AAI12380.1| Matrix metallopeptidase 25 [Mus musculus]
Length = 615
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 60/193 (31%), Gaps = 51/193 (26%)
Query: 31 KPDVLTTHRLSFDITELNPNAQ---EVARW----ALGEWSKVVDLTFEETSIHSD----- 78
V L++ I + +Q ++ R AL W+ LTF+E +
Sbjct: 166 SGSVWKKRTLTWSIRSFSQKSQLSPQIVRTLLSYALAVWATESGLTFQEVNSQYQEPDII 225
Query: 79 IKFI-------------SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL--SHN 123
I F + P + +FD + W +G +
Sbjct: 226 IHFARAYHQDSYPFDGSGGTLAHAFFPGEHP-ISGDTHFDDEETWTFGSTDDNGIDLFAV 284
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A+HE GHALGL H S S+M F A++
Sbjct: 285 AVHEFGHALGLGHS-------------------SAPNSIMRPFYQGPVGDPATYRLPQ-- 323
Query: 184 MVSDIVAVQKIYG 196
D +Q++YG
Sbjct: 324 --DDRDGLQQLYG 334
>gi|289976573|gb|ADD21635.1| matrix metalloprotease 1 [Nicotiana benthamiana]
Length = 364
Score = 65.2 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 69/242 (28%), Gaps = 51/242 (21%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG 60
M++ KP ++ I H + + R+ L N + V A
Sbjct: 129 MNSGKPSAGSQNI--HTVAHFSFFPGRPRWPESNRDLTYAFLPQNGLTDNIKSVFSRAFD 186
Query: 61 EWSKVVDLTFEETSI--HSDIKFIS---------------SNNGYVCTPRYD------SR 97
WS+V LTF E + +DIK + +P
Sbjct: 187 RWSEVTPLTFTEIASFQSADIKIGFFAGDHNDGEPFDGPMGTLAHAFSPPGGHFHLDGDE 246
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
++ + + I L A+HEIGH LGL H DS
Sbjct: 247 NWVIDGAPIVEGNFFSILSAVDLESVAVHEIGHLLGLGH---------------SSVEDS 291
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
+ A+ DI VQ +YG+ G N + D+
Sbjct: 292 IMF-----------PSLAAGTRRVELANDDIQGVQVLYGSNPNFTGPNTVLTPTHENDTN 340
Query: 218 FI 219
Sbjct: 341 GA 342
>gi|118085141|ref|XP_001235210.1| PREDICTED: similar to matrix metalloproteinase-13 [Gallus gallus]
Length = 471
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 58/197 (29%), Gaps = 51/197 (25%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WSN + Y+ T+ + + A WS V L F S +
Sbjct: 109 RKLKWSNTNLTYRIMSYTSDLR-------RAEVERAFKRAFKVWSDVTPLNFTRIRSGTA 161
Query: 78 DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + P Y + +FD + W +G L
Sbjct: 162 DIMISFGTKEHGDFYPFDGPSGLLAHAFPP--GPDYGGDAHFDDDETWS-DDSRGYNLFL 218
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH+LGL H + + +Y + F
Sbjct: 219 VAAHEFGHSLGLEHSRDPGA---------------LMFPIYTYT------GKSGFVLPD- 256
Query: 183 PMVSDIVAVQKIYGAPK 199
D+ +Q++YGA
Sbjct: 257 ---DDVQGIQELYGAGD 270
>gi|149716438|ref|XP_001500102.1| PREDICTED: similar to matrix metalloproteinase [Equus caballus]
Length = 483
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 55/199 (27%), Gaps = 55/199 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ T T + P AL WS V L F +DI
Sbjct: 117 WKKNTLTYRISKYT--------TSMTPADVNKAVEMALQAWSSAVPLNFVRVDSGEADIM 168
Query: 81 FISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ P + +FD A+ W G G L A
Sbjct: 169 ISFETGDHGDSYPFDGPRGTLAHAFAP--GEGLGGDTHFDNAEKWTMGT-NGFNLFTVAA 225
Query: 126 HEIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE GHALGL H YP Y N Y
Sbjct: 226 HEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKD------------------------ 261
Query: 185 VSDIVAVQKIYGAPKGSLG 203
D+ +Q +YG + LG
Sbjct: 262 --DVKGIQALYGPRRAFLG 278
>gi|77465510|ref|YP_355013.1| hemolysin-type calcium-binding region, RTX [Rhodobacter sphaeroides
2.4.1]
gi|126463913|ref|YP_001045026.1| hemolysin-type calcium-binding region [Rhodobacter sphaeroides ATCC
17029]
gi|221369513|ref|YP_002520609.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides
KD131]
gi|332561168|ref|ZP_08415486.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides
WS8N]
gi|77389928|gb|ABA81112.1| Hemolysin-type calcium-binding region, RTX [Rhodobacter sphaeroides
2.4.1]
gi|126105724|gb|ABN78254.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides ATCC
17029]
gi|221162565|gb|ACM03536.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides
KD131]
gi|332274966|gb|EGJ20282.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides
WS8N]
Length = 202
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 53/171 (30%), Gaps = 26/171 (15%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G +N I T++W I G N I + + G GND + G + + SG+D
Sbjct: 6 GTARNDILQGTDAWDIIYGGSGNDRIYGGAGNDELKGGFGNDRLWGGTGRDDLEGGSGDD 65
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ G +G D + +++ + +
Sbjct: 66 ILSGGAGDD--ELEGDAGNDRLWGGAGNDELEGGS-----------------GADRLHGG 106
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
L+ + L G+DV +EF +GRD D
Sbjct: 107 SGNDRLDGGTGNDVLTGGAGRDV-------FEFERGDGRDRITDFTNGQDR 150
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 44/123 (35%), Gaps = 6/123 (4%)
Query: 204 NNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ IY + K ++ G D L GG + I + G N
Sbjct: 29 DRIYGGAGNDELKGGFGNDRLWGGTGRD----DLEGGSGDDILSGGAGDDELEGDAGNDR 84
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G SG D + G S N+ +GNDV G +G D F + +I F
Sbjct: 85 LWGGAGNDELEGGSGADRLHGGSGNDRLDGGTGNDVLTGGAGRDVFEFERGDGRDRITDF 144
Query: 322 ENA 324
N
Sbjct: 145 TNG 147
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 51/163 (31%), Gaps = 15/163 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + IY G+D + GG N + G + + +
Sbjct: 10 NDILQGTDAWDIIYGGSGNDRI----YGGAGNDELKGGFGNDRLWGGTGRDDLEGGSGDD 65
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFE 322
+ G +G+D + G++ N+ + +GND +G SG D + +
Sbjct: 66 ILSGGAGDDELEGDAGNDRLWGGAGNDELEGGSGADRLHGGSGNDRLDGGTGNDVLTGGA 125
Query: 323 NAIIVYDANEHKQDFLSDV----ERLRFADQCIDSVNVKQRSI 361
+ +D ++D +RL D V
Sbjct: 126 GRDVFEFERGDGRDRITDFTNGQDRLELDDFTRMQVQAVIDDA 168
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 34/127 (26%), Gaps = 3/127 (2%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQD 336
+ G + N++ + D+ G SG D + + ++ ++ +
Sbjct: 2 ARIKGTARNDILQGTDAWDIIYGGSGNDRIY--GGAGNDELKGGFGNDRLWGGTGRDDLE 59
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
S + L + L A ++L G D G D
Sbjct: 60 GGSGDDILSGGAGDDELEGDAGNDRLWGGAGNDELEGGSGADRLHGGSGNDRLDGGTGND 119
Query: 397 ITFDSYL 403
+
Sbjct: 120 VLTGGAG 126
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 35/142 (24%), Gaps = 10/142 (7%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
L+ D + A ++L G D + G DI
Sbjct: 12 ILQGTDAWDIIYGGSGNDRIYGGAGNDELKGGFGNDRLWGGTGRDDLEGGSGDDIL---- 67
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
G+ DD + + G E L + ++ L +
Sbjct: 68 -SGGAGDDELEGDAGNDRL----WGGAGNDELEGGSGADRLHGGSGNDRLDGGTGNDVLT 122
Query: 463 VQVGKDHFSNF-GCEEGRFVTF 483
G+D F G R F
Sbjct: 123 GGAGRDVFEFERGDGRDRITDF 144
>gi|259414788|ref|ZP_05738711.1| poly(beta-D-mannuronate) C5 epimerase 2 [Silicibacter sp.
TrichCH4B]
gi|259349239|gb|EEW60986.1| poly(beta-D-mannuronate) C5 epimerase 2 [Silicibacter sp.
TrichCH4B]
Length = 656
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 45/162 (27%), Gaps = 3/162 (1%)
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
N T ++ G + T+ +++ G +G+D + G + N+ G D G
Sbjct: 406 NDTITGTIGDDTLEGGGGDDTLNGGEGADTLDGGAGSDTLNGGAGNDSLAGGDGADTLIG 465
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNVK 357
G DT + + + D L + + +
Sbjct: 466 GDGDDTLSGGDSESDVRDVIYGGVGNDNIDGGYGNDELRGDAGNDSIEGGFGSDTVIGGD 525
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+L +A + + G D D F
Sbjct: 526 GDDVLTGSALSDQVFGGAGSDFVNGGFGHDRVNGGGDADKFF 567
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 9/129 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM-------- 260
T+ GDD L + +I G N
Sbjct: 450 GNDSLAGGDGADTLIGGDGDDTLSGGDSESDVRDVIYGGVGNDNIDGGYGNDELRGDAGN 509
Query: 261 -TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+I ++V+G G+DV+ G++ ++ F +G+D +G G D + +
Sbjct: 510 DSIEGGFGSDTVIGGDGDDVLTGSALSDQVFGGAGSDFVNGGFGHDRVNGGGDADKFFHL 569
Query: 320 RFENAIIVY 328
N +
Sbjct: 570 GVANHGSDW 578
Score = 42.9 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 32/144 (22%), Gaps = 5/144 (3%)
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ L + L+ A + L G D +G D
Sbjct: 414 GDDTLEGGGGDDTLNGGEGADTLDGGAGSDTLNGGAGNDSLAGGDGADTLIGGDGDDTLS 473
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
D + G+D +G E R ++E + +I D
Sbjct: 474 GGDSESDVRDVIYGGVGNDNID-----GGYGNDELRGDAGNDSIEGGFGSDTVIGGDGDD 528
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTF 483
D + F
Sbjct: 529 VLTGSALSDQVFGGAGSDFVNGGF 552
Score = 39.8 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 42/356 (11%), Positives = 84/356 (23%), Gaps = 13/356 (3%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G+ + I + F +I +G + + ++ G +
Sbjct: 123 SGDALPSITTAAEWLAFEDSITGTGYPSGTYAPNQDILLSSFFPSSSEDDVAYGTSGDDL 182
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + + G+ GND + G + + ++ N DG + D S + +
Sbjct: 183 IETGDGDDDIAGNGGNDTINGGAGEDWMVINAHNATLDGGADFDDAVIVDTSNTAILVDY 242
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ L D ++ + + + E + D + +
Sbjct: 243 SAGTTGNQLHISGMTDLEDDSTTQYTVETANVERAVIEATGEVLIAGNDAANRVRFNEMP 302
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ + F G D D +D + G + G
Sbjct: 303 EV---FTFNGGGGTD-RLDVDRTWVENNDGGRIRGITLDFFLENTRLEGSATSLTIYDAD 358
Query: 442 ALEYIASHEDL-----INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
I D+ L + G + + DD
Sbjct: 359 DNSVIGVLNDVEEIRFATDEGGREVLTVAEVLALAGGGGGGTTTSGGNDTITGTIGDDTL 418
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G D G L A ++ L + G D
Sbjct: 419 EGGGGDDTLN----GGEGADTLDGGAGSDTLNGGAGNDSLAGGDGADTLIGGDGDD 470
>gi|260577452|ref|ZP_05845409.1| hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
gi|259020332|gb|EEW23671.1| hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
Length = 385
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 50/314 (15%), Positives = 80/314 (25%), Gaps = 31/314 (9%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ + + G +G+D ++G ++V +G D +G +G D Y R +
Sbjct: 72 SGNDQLFGRAGDDTLLGGDGDDVLSGGTGADRLEGGAGRDRAVYVDGLA----VRVNLGL 127
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
V + D+L D+E L V + L A + L + G D
Sbjct: 128 AVQQNTGYGLDWLIDIEDLLTGAGADMLVGSVLDNGLTAGAGNDTLYGIAGNDTLSGDLG 187
Query: 386 FYEFGLSEGRDITF--DSYLYLGSYDDLRNVFGSDRGAAARHYIT----HGVKEGRNPDA 439
G D L R G +
Sbjct: 188 NDLIDGGVGVDTALFLGVQAIQVDLASLAAQDTGHGIDTLRGIENLRAGSGADLLSGSTS 247
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
LE +A ++ L + G D + L G VF
Sbjct: 248 ANLLEGVAGNDTLFGRSGNDTLDGGAGNDQLQGDDGNDLLLGGLGDDLLSGGTGSDTAVF 307
Query: 500 GSDRGAAARHYITHGVKEGRNPDAF---------------------KALEYIASHEDLIN 538
+ +T G+ D F L A ++ L
Sbjct: 308 TASLATVINLNLTTAQNTGQGLDRFLGVENLTTGAGNDVLTGSTLANVLSAGAGNDRLNG 367
Query: 539 AFADAPDLVQAGKD 552
D L G D
Sbjct: 368 GAGDDTLLGSDGND 381
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 46/138 (33%), Gaps = 4/138 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ + + + +GND + G + N+ GND+ DG G+DT +
Sbjct: 145 DLLTGAGADMLVGSVLDNGLTAGAGNDTLYGIAGNDTLSGDLGNDLIDGGVGVDTALFLG 204
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + A + H D L +E LR ++LE A + L
Sbjct: 205 VQA----IQVDLASLAAQDTGHGIDTLRGIENLRAGSGADLLSGSTSANLLEGVAGNDTL 260
Query: 372 IQVIGQDVFESMKHFYEF 389
G D + +
Sbjct: 261 FGRSGNDTLDGGAGNDQL 278
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/316 (12%), Positives = 75/316 (23%), Gaps = 27/316 (8%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
D G T+L + + G G VD + +V
Sbjct: 70 GLSGNDQLFGRAGDDTLLGGDGDDVLSGGTGADRLEGGAGRDRAVYVDGLAVRVNLGLAV 129
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK--IEVQQKDSPFIQ 220
+ +V G G+ + +Y
Sbjct: 130 QQNTGYGLDWLIDIEDLLTGAGADMLVGSVLDNGLTAGAGNDTLYGIAGNDTLSGDLGND 189
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG--GYEKNMTIAQHTVIESVVGSSGND 278
I G D + ++ + + G + + + + GS+ +
Sbjct: 190 LIDGGVGVDTALFLGVQAIQVDLASLAAQDTGHGIDTLRGIENLRAGSGADLLSGSTSAN 249
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH----- 333
++ G + N+ F SGND DG +G D + L ++ + ++
Sbjct: 250 LLEGVAGNDTLFGRSGNDTLDGGAGNDQLQGDDGNDLLLGGLGDDLLSGGTGSDTAVFTA 309
Query: 334 ------------------KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
D VE L ++L A + L
Sbjct: 310 SLATVINLNLTTAQNTGQGLDRFLGVENLTTGAGNDVLTGSTLANVLSAGAGNDRLNGGA 369
Query: 376 GQDVFESMKHFYEFGL 391
G D
Sbjct: 370 GDDTLLGSDGNDTLNG 385
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 66/272 (24%), Gaps = 16/272 (5%)
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G D +G +G D Y + + A + E D L ++E L +
Sbjct: 1 GLGADRLEGGAGRDRADYSQATAGVLVDMLNGA---INTGEAVGDVLVEIENLCGSQLGD 57
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ ++L + + L G D G D +
Sbjct: 58 VLIADNAANLLHGLSGNDQLFGRAGDDTLLGGDGDDVLSGGTGADRLEGGAGRDRAVYVD 117
Query: 412 RNVFGSDRGAAARHYITHGVK------EGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
+ G A + +G+ + L L +
Sbjct: 118 GLAVRVNLGLAVQQNTGYGLDWLIDIEDLLTGAGADMLVGSVLDNGLTAGAGNDTLYGIA 177
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYL-----GSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
G D S + L DL ++ D G G++ R
Sbjct: 178 GNDTLSGDLGNDLIDGGVGVDTALFLGVQAIQVDLASLAAQDTGHGID--TLRGIENLRA 235
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L S L + ++G D
Sbjct: 236 GSGADLLSGSTSANLLEGVAGNDTLFGRSGND 267
>gi|28871227|ref|NP_793846.1| mannuronan C-5-epimerase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|28854477|gb|AAO57541.1| mannuronan C-5-epimerase, putative [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 1610
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 49/408 (12%), Positives = 109/408 (26%), Gaps = 25/408 (6%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL +S + ++ G+S +D +IG++ N++ G D G G
Sbjct: 1201 DLGFRGNASDNNDPAAIFAGGQNEGGNIFGTSDDDTLIGSAGNDILDGDQGADQMTGGDG 1260
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L ID ++++
Sbjct: 1261 NDIYVVDNSLDTVTESNDSPSQVDTVVSSVSWTLGANVENLLLTGVSAIDGTGNALKNVI 1320
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+S + G D+ + + + + + + D +A
Sbjct: 1321 TGNSSDNVVDGGAGGDLLKGGDGSDSYY------VDDVADRVVETNSDAWVGGVDTVYSA 1374
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHED-LINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
Y E + D ++ A A + + +++
Sbjct: 1375 LASYTLGAHLENIAITRTDTANATGNALDNVLYAGAGDNVMGGRDGNDTASYLFASAGVT 1434
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF---KALEYIASHEDLIN 538
+ + GS G + + L A ++ L
Sbjct: 1435 ------VALNTSAQQATGGSGLDTLKGTENLTGSQFADSLTGNKNANVLNGGAGNDTLSG 1488
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
D + +G D + G FN D + + +
Sbjct: 1489 GAGDDVLIGSSGAD--TLIGGTGADRYVFNSID--EVGRDGLRDIINGFKVSEGDKLDFT 1544
Query: 599 MKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ R L + F + N + + + +L LY + +
Sbjct: 1545 GFDARPLTDTHDAFTFIGNSAFSANNTGELRF----ADGVLYGNVDDN 1588
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 88/279 (31%), Gaps = 14/279 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + + ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDAFPLVTVLG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I E + G +G D + G + +++ +G D +G +G DTF + +
Sbjct: 387 TEANDVITGGAAHELIFGLAGKDTLNGGTGDDILVGGAGADKLNGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ ++ D + L+++ ++N+ + L+ T +
Sbjct: 447 YRTATTSATDLLTDFNVSQDRIDLANLGFTGLGSGKNGTLNISYNATLDRTYVKSLDVDA 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ I D L G+D GV
Sbjct: 507 SGNRFELGLTGNLKDTLNASHFIFQRVTEGTAGGDTLTGTAGNDVIN-----GNAGVDRI 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ A + L + D + N+
Sbjct: 562 DGGAGADTINGGADADTLTGGAGADVFVYSSRLDSYRNY 600
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 68/512 (13%), Positives = 139/512 (27%), Gaps = 28/512 (5%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADV---WRYGIGKGTILSHNALHEI 128
E + + N T + + + + +F G +++ A HE+
Sbjct: 342 ERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVLGTEANDVITGGAAHEL 401
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD- 187
L + G + + + ++ Q + + AT +++D
Sbjct: 402 IFGLAGKDTLNGGTGDDILVGGAGADKLNGGAGADTFRFDQLTDSYRTATTSATDLLTDF 461
Query: 188 -------IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+A G G G + D+ G+ +L L G +K
Sbjct: 462 NVSQDRIDLANLGFTGLGSGKNGTLNISYNATLDRTYVKSLDVDASGN-RFELGLTGNLK 520
Query: 241 NYIDLNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ ++ + + + G T+ + + G++G D + G + + + D
Sbjct: 521 DTLNASHFIFQRVTEGTAGGDTLTGTAGNDVINGNAGVDRIDGGAGADTINGGADADTLT 580
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENA----IIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
G +G D F Y + Y+ Y IV + LS + D +++
Sbjct: 581 GGAGADVFVYSSRLDSYRNYTAGGPKQSDTIVDFNVAEDRIDLSAIGLRGPGDGSANTLY 640
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ T + + G +++ L F S L
Sbjct: 641 LSLNGDGSKTYVKTNAVDTTGNRFEIALEGNLLDKLGASN-FIFSSASATNQAPVLNTPL 699
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA----DAPDLVQVGKDHFS 471
+ + + AL Y A+ D D+ L G +
Sbjct: 700 MDQIVTELKPFSYAVQPGSFSDPDSTALTYSATLADNSALPDWLKFDSKTLTFSGTPGGT 759
Query: 472 NFGCEEGRFVTFDSYL------YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
G D+ + + ++ + +A Y T G
Sbjct: 760 ASGLYSVLLTASDATGASVADSFAINVGNVAPGIITGTESAEALYGTEGNDTLLGLGGDD 819
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
L + L A D F
Sbjct: 820 TLRGDTGADVLNGGAGRDALYGGADTDTFVYS 851
Score = 45.9 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 59/177 (33%), Gaps = 17/177 (9%)
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
D+ Y +D V + +D + A+ + + I + N
Sbjct: 1344 SDSYYVDDVADRVVETNSDAWVGGVDTVYSALASYTLGAHLENIAITRTDTANATGNA-- 1401
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN--------- 259
++ + G+D L + LNT + + GG +
Sbjct: 1402 LDNVLYAGAGDNVMGGRDGNDTASY-LFASAGVTVALNTSAQQATGGSGLDTLKGTENLT 1460
Query: 260 -----MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ + + G +GND + G + ++V SSG D G +G D + + +
Sbjct: 1461 GSQFADSLTGNKNANVLNGGAGNDTLSGGAGDDVLIGSSGADTLIGGTGADRYVFNS 1517
>gi|35903119|ref|NP_919397.1| matrix metalloproteinase-14 [Danio rerio]
gi|32251076|gb|AAP74483.1| membrane-type matrix metalloproteinase 1 alpha [Danio rerio]
gi|124297207|gb|AAI31865.1| Matrix metalloproteinase 14 (membrane-inserted) alpha [Danio rerio]
Length = 574
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 49/166 (29%), Gaps = 35/166 (21%)
Query: 16 HLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-- 73
++ + W + + T E + A W V L F E
Sbjct: 110 YVAQGSKWDKREVTFSIQNYTPKVGE-------RATHEAIKKAFRVWEAVTPLKFREIPY 162
Query: 74 -------------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWR 111
H D G+ P + +FD+A+ W
Sbjct: 163 SQINGKVEKFADIMLFFAEGFHGDSTPFDGEGGFLAHAYFP--GHGIGGDTHFDEAEPWT 220
Query: 112 YGIGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G G + A+HE+GHALGL H G + + D EN
Sbjct: 221 TGNVDKGGNDVFLVAVHELGHALGLEHSGDPSAIMAPFYQWMDTEN 266
>gi|254505835|ref|ZP_05117980.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Vibrio parahaemolyticus 16]
gi|219551058|gb|EED28038.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Vibrio parahaemolyticus 16]
Length = 5819
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 53/140 (37%), Gaps = 3/140 (2%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL---IGGVKNY 242
+D ++ K+ GA G+ + I + T D D ++D + ++
Sbjct: 5590 ADAISSLKLEGADVGNHTLTVTAISQESNGDTASSTSLDLNLDVVIDGSTIDQSTQAQDV 5649
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + + + + + + ++G SG+D + G +++ G+D+ G
Sbjct: 5650 QLIGDGGNTELHSGSGDDLLQGGSGNDHLIGGSGDDHLQGGEGDDILEGGLGSDILTGGG 5709
Query: 303 GLDTFFYYAPSYLYKIYRFE 322
G+DTF + +
Sbjct: 5710 GMDTFVWLDIDDGATDTITD 5729
Score = 44.8 bits (104), Expect = 0.047, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 7/119 (5%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
S GD +L + ID S +++ + + SG+D++ G S
Sbjct: 5617 SNGDTASSTSLDLNLDVVID---GSTIDQSTQAQDVQLIGDGGNTELHSGSGDDLLQGGS 5673
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY--DANEHKQDFLSDV 341
N+ SG+D G G D + D ++ D ++D
Sbjct: 5674 GNDHLIGGSGDDHLQGGEGDDIL--EGGLGSDILTGGGGMDTFVWLDIDDGATDTITDF 5730
Score = 42.1 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 25/89 (28%)
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
N +V D + Q + +L + + +L+ + +
Sbjct: 5617 SNGDTASSTSLDLNLDVVIDGSTIDQSTQAQDVQLIGDGGNTELHSGSGDDLLQGGSGND 5676
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
LI G D + + G DI
Sbjct: 5677 HLIGGSGDDHLQGGEGDDILEGGLGSDIL 5705
>gi|254450975|ref|ZP_05064412.1| type I secretion target repeat protein [Octadecabacter antarcticus
238]
gi|198265381|gb|EDY89651.1| type I secretion target repeat protein [Octadecabacter antarcticus
238]
Length = 830
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/310 (11%), Positives = 69/310 (22%), Gaps = 6/310 (1%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA + G TI G++ ++ G + + I G
Sbjct: 110 GANTITAG----TGNNTIISGAGADTIAIGNGNNYVNA-GDGANTISAGVTGTGDNVIIG 164
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
TI + G + + NN D +G +
Sbjct: 165 GTAADTITVGNGNNRIKTGDGVNTIAAGDGNNFIIGGVAVDTITVGNGNNYIDGGTFGAN 224
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
F + I + + D I+ A + + I
Sbjct: 225 TITAGFGDNFITTGNAVDTITAMGGDNIIDAGDGANKVTTGVGNDIIAVGAGADTVTSGI 284
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D+ + G D Y + V G+ +
Sbjct: 285 GDDIVSVVGGADTVTTGAGYDRLVVDYSAFSTNMVSSPVTGAVSYIGNFSDGAANIVSFT 344
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
+ F + ++ ++ + G D + F S L G D
Sbjct: 345 AVEEF-YITTGGGNDTIVTGAGADILDSRSGADTLDAGAGIDTILAGFGSDLIYGRSGDS 403
Query: 496 RNVFGSDRGA 505
+
Sbjct: 404 IDGGEDADDT 413
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/212 (13%), Positives = 63/212 (29%), Gaps = 10/212 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D T+ G + + L + ++ + + T+ + G GNDV+ N+
Sbjct: 540 DDTIETGSGDDVLLGSRGNDTLIAWCGDDTMNAGWGDDKAFGGRGNDVINLEKGNDFAEA 599
Query: 292 SSGNDVFDGSSGLDTFFY-----YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
G+DV +G +G D + + K+ ++ N + Q + + F
Sbjct: 600 GLGDDVINGGAGDDLIYGDTKIEDSLGGDDKLRGGAGNDELHGNNGNDQLNGGSGDDVLF 659
Query: 347 AD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD----S 401
D + + + ++ G D G D
Sbjct: 660 GDQGNDNITGGEGNDWAAGGVGDDQMLGQTGSDEMHGNDGKDYLNGGAGNDTLAGGNGVD 719
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
+ G+ D + ++ + +
Sbjct: 720 KIVGGTGSDTIKGGAGNDNLWGGNWSSDSASD 751
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 62/421 (14%), Positives = 115/421 (27%), Gaps = 40/421 (9%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
S + +F + G T + + + AD G G TIL+ I
Sbjct: 341 VSFTAVEEFYITTGGGNDTIVTGAGADILDSRSGADTLDAGAGIDTILAGFGSDLIYGRS 400
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G + V N + + +DAS + ++I ++
Sbjct: 401 GDSIDGGEDADDTDVDVLNLNHFGAHEIVLDDPEKGTVYALDASGTRIGSLSFTNIESIV 460
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G + I V++ + + + + G+ ID+ + WS+
Sbjct: 461 ---GDNLVFAAPEVLSIAVKEVAPEVLSITVEETDLVVPCPEDVAGILVAIDMVGQEWSN 517
Query: 253 IGGY----------------EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
+ G+ K+ TI + + ++GS GND +I ++ G+D
Sbjct: 518 VNGHWVYDETKIVQNGRELSAKDDTIETGSGDDVLLGSRGNDTLIAWCGDDTMNAGWGDD 577
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G G D + + D + ++ ++
Sbjct: 578 KAFGGRGNDVINLEKGND----FAEAGLGDDVINGGAGDDLIYGDTKIE--------DSL 625
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
L A ++L G D +G D D G
Sbjct: 626 GGDDKLRGGAGNDELHGNNGNDQLNGGSGDDVLFGDQGNDNITGGEG----NDWAAGGVG 681
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
D+ G E D L A ++ L + G D
Sbjct: 682 DDQML-----GQTGSDEMHGNDGKDYLNGGAGNDTLAGGNGVDKIVGGTGSDTIKGGAGN 736
Query: 477 E 477
+
Sbjct: 737 D 737
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 57/217 (26%), Gaps = 9/217 (4%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + TI G++ + + G + I + + G N A
Sbjct: 97 TVGNEDNLIDAGAGANTITAGTGNNTI---ISGAGADTIAIGNGNNYVNAGDGANTISAG 153
Query: 265 --HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
T ++G + D + + NN G + G + +
Sbjct: 154 VTGTGDNVIIGGTAADTITVGNGNNRIKTGDGVNTIAAGDGNNFIIGGVAVDTITVGNGN 213
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
N I + + + + +I++ + +G D+
Sbjct: 214 NYIDGGTFGANTITAGFGDNFITTGNAVDTITAMGGDNIIDAGDGANKVTTGVGNDIIAV 273
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
G DI +G D + G DR
Sbjct: 274 GAGADTVTSGIGDDIV----SVVGGADTVTTGAGYDR 306
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 56/172 (32%), Gaps = 6/172 (3%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G+ + IY + + G+D L G N + G +
Sbjct: 607 NGGAGDDLIYGDTKIEDSLGGDDKLRGGAGNDEL----HGNNGNDQLNGGSGDDVLFGDQ 662
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N I + G G+D ++G + ++ + G D +G +G DT + + K
Sbjct: 663 GNDNITGGEGNDWAAGGVGDDQMLGQTGSDEMHGNDGKDYLNGGAGNDTL--AGGNGVDK 720
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + + + + + +D I + + ++ A +
Sbjct: 721 IVGGTGSDTIKGGAGNDNLWGGNWSSDSASDTFIFEGGTGKDYVHDFEAGLD 772
Score = 39.4 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 68/522 (13%), Positives = 132/522 (25%), Gaps = 52/522 (9%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ D I T + D + G G I+ A+ I
Sbjct: 154 VTGTGDNVIIGGTA--ADTITVGNGNNRIKTGDGVNTIAAGDGNNFIIGGVAVDTITVGN 211
Query: 133 GLMHPGSYNGGYPVY---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
G + G DN + + ++ + T + +DI+
Sbjct: 212 GNNYIDGGTFGANTITAGFGDNFITTGNAVDTITAMGGDNIIDAGDGANKVTTGVGNDII 271
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-TE 248
AV +G++I T+ G D L + N + T
Sbjct: 272 AVGAGADTVTSGIGDDI------VSVVGGADTVTTGAGYDRLVVDYSAFSTNMVSSPVTG 325
Query: 249 SWSSIG---GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ S IG N+ + GND ++ + ++ SG D D +G+D
Sbjct: 326 AVSYIGNFSDGAANIVSFTAVEEFYITTGGGNDTIVTGAGADILDSRSGADTLDAGAGID 385
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS----DVERLRFAD---QCIDSVNVKQ 358
T S L ++ DA++ D L+ + D + +++
Sbjct: 386 TILAGFGSDLIYGRSGDSIDGGEDADDTDVDVLNLNHFGAHEIVLDDPEKGTVYALDASG 445
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE------GRDITFDSYLYLGSYDDLR 412
I + S+ ++ ++G ++ + + E + + D
Sbjct: 446 TRI--GSLSFTNIESIVGDNLVFAAPEVLSIAVKEVAPEVLSITVEETDLVVPCPEDVAG 503
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ D + E A + + D L G D
Sbjct: 504 ILVAIDMVGQEWSNVNGHWVYDETKIVQNGRELSAKDDTIETGSGDDVLLGSRGNDTLIA 563
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH------------------- 513
+ ++ + G + A
Sbjct: 564 WCGDDTMNAGWGDDKAFGGRGNDVINLEKGNDFAEAGLGDDVINGGAGDDLIYGDTKIED 623
Query: 514 ---GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G + R L ++ L D G D
Sbjct: 624 SLGGDDKLRGGAGNDELHGNNGNDQLNGGSGDDVLFGDQGND 665
Score = 37.1 bits (84), Expect = 9.8, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 49/208 (23%), Gaps = 14/208 (6%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
+ + +L + + LI G D + + G D+
Sbjct: 535 ELSAKDDTIETGSGDDVLLGSRGNDTLIAWCGDDTMNAGWGDDKAFGGRGNDVIN----- 589
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
L +D D I G + K + + + L +
Sbjct: 590 LEKGNDFAEAGLGDDV------INGGAGDDLIYGDTKIEDSLGGDDKLRGGAGNDELHGN 643
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
G D + ++ F + G + G G E D
Sbjct: 644 NGNDQLNGGSGDDVLFGDQGNDNITGGEGNDWAAGGVGDDQML---GQTGSDEMHGNDGK 700
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKD 552
L A ++ L + G D
Sbjct: 701 DYLNGGAGNDTLAGGNGVDKIVGGTGSD 728
>gi|163739550|ref|ZP_02146960.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
BS107]
gi|161387303|gb|EDQ11662.1| Hemolysin-type calcium-binding protein [Phaeobacter gallaeciensis
BS107]
Length = 969
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/340 (13%), Positives = 87/340 (25%), Gaps = 29/340 (8%)
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ 220
+++ D + SD++ + + Y +
Sbjct: 5 YLVTLGDGTLDSGDGISANQSAFTSSDVIGTGSWTWSGQYQGDGQTYSNVTDTGTYHYGS 64
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
D T I N S+ G N TI+ + G G+D +
Sbjct: 65 DGNVYFVPDTWYTTSGSASATTIPAN-----SMSGTSGNDTISGDANDNVIYGGDGDDYL 119
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ----- 335
G+S +++ F G+D +D +G DTF+ IY + +Y +
Sbjct: 120 TGSSGDDIIFGGEGSDNYDTDTGNDTFYGEGGDDWVAIYDNMDGESLYGGETGETLGDML 179
Query: 336 -------DFLSDVERLRFADQCIDSVNVKQ----RSILEYTASYEDLIQVIGQDVFESMK 384
+V D + + + L
Sbjct: 180 EVYGDYAGVDVNVTFTGDGDGTVTFGGQTAYFWEFERFYLHSGDDTLDGSAATSAINVQT 239
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G D + + + D GA A + + L
Sbjct: 240 G--------GGDNSVTGGMGDDTISTGAGADTVDGGAGADSIDAGSGDDVVTGSSGDTLL 291
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
A ++ + A + G ++ G G + + D
Sbjct: 292 GGAGNDQITINAASGGSVAPSGATVVTDGGSASGDYDSND 331
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 78/552 (14%), Positives = 134/552 (24%), Gaps = 69/552 (12%)
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
++ F + ++ S+ + S +V G G + +
Sbjct: 67 NVYFVPDTWYTTSGSASATTIPANSMSGTSGNDTISGDANDNVIYGGDGDDYLTGSSGDD 126
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
I G + + G YG D D +
Sbjct: 127 IIFGGEGSDNYDTDTGNDTFYGEGGD---DWVAIYDNMDGESLYGGETGETLGDMLEVYG 183
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D V G+ Q + Y GDD LD + N
Sbjct: 184 DYAGVDVN--VTFTGDGDGTVTFGGQTAYFWEFERFYLHSGDDTLDGSAATSAINVQ--T 239
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+S+ G + TI+ ++V G +G D + S ++V SSG D G +G D
Sbjct: 240 GGGDNSVTGGMGDDTISTGAGADTVDGGAGADSIDAGSGDDVVTGSSG-DTLLGGAGNDQ 298
Query: 307 FFYYA-------PSYLYKIYRFENAIIVYDANEHKQ----------------------DF 337
A PS + +A YD+N+ D
Sbjct: 299 ITINAASGGSVAPSGATVVTDGGSASGDYDSNDFAWNPGSSSSSSISMGGTPGTTGSDDV 358
Query: 338 LSDVERLRFADQ------------------------CIDSVNVKQRSILEYTASYEDLIQ 373
+ L D + + A+
Sbjct: 359 YDSITVLNTTDGAFLGVSQFDVGIDKVYLSEEPVSFTNTLASSGVSDFVVTYANGNTQSF 418
Query: 374 VIGQDVFESMKHFYEF-------GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
D ++ +F G + D+ D + G D+ +
Sbjct: 419 RFYNDGGAAISDPAQFFGTSVISGATLSGGEGDDTLTGGYGADSIDGGDGQDQIILQDGF 478
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ G +L+ + + + F E T S
Sbjct: 479 GNDTITGGEGGVDQDSLDLSQLSSGAVITMSGPEAGTVTVGSDTAQFSEIESITGTEKSD 538
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
GS + + G G + + LE A +DL D
Sbjct: 539 YIDGSAQSGNLAYVNSGGGDDTILGGSGNDDLQGGAGNDRLEGRAGTDDLRGGTGDDYLD 598
Query: 547 VQAGKDHFSNFG 558
G D + + G
Sbjct: 599 GGTGGD-YIDAG 609
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/211 (13%), Positives = 63/211 (29%), Gaps = 10/211 (4%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+ YG D+ D ++ D++ G + D+ +
Sbjct: 450 GDDTLTGGYGADSIDGGDGQDQIILQDGFGNDTITGGEGGVDQDSL--DLSQLSSGAVIT 507
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID--------LNTESW 250
+ I++I + D +D + G Y++ L
Sbjct: 508 MSGPEAGTVTVGSDTAQFSEIESITGTEKSDYIDGSAQSGNLAYVNSGGGDDTILGGSGN 567
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N + + + G +G+D + G + + +G+D G +G DT
Sbjct: 568 DDLQGGAGNDRLEGRAGTDDLRGGTGDDYLDGGTGGDYIDAGTGSDTVIGGTGDDTIQLT 627
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
A + ++ + + N D
Sbjct: 628 ADADRDEVILEDGSGSDLIYNFDLGDSGDGT 658
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 48/414 (11%), Positives = 83/414 (20%), Gaps = 67/414 (16%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ T + AD G G + + +G A
Sbjct: 239 TGGGDNSVTGGMGDDTISTGAGADTVDGGAGADSIDAGSGDDVVTGSSGDTLLGGAGNDQ 298
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS-------FGYCATPMVSDI 188
+ G V D S +S G T D+
Sbjct: 299 ITINAASGGSVAPSGATVVTDGGSASGDYDSNDFAWNPGSSSSSSISMGGTPGTTGSDDV 358
Query: 189 ---------------VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL 233
Q G K L S + +
Sbjct: 359 YDSITVLNTTDGAFLGVSQFDVGIDKVYLSEEPVSFTNTLASSGVSDFVVTYANGNTQSF 418
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN--VFFE 291
I + + + T++ +++ G G D + G + + +
Sbjct: 419 RFYNDGGAAISDPAQFFGT--SVISGATLSGGEGDDTLTGGYGADSIDGGDGQDQIILQD 476
Query: 292 SSGNDVFDGSSGL-------------------------------DTFFYY-------APS 313
GND G G DT +
Sbjct: 477 GFGNDTITGGEGGVDQDSLDLSQLSSGAVITMSGPEAGTVTVGSDTAQFSEIESITGTEK 536
Query: 314 YLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSILEYTASYED 370
Y ++ + Y + D + S + L+ L +
Sbjct: 537 SDYIDGSAQSGNLAYVNSGGGDDTILGGSGNDDLQGGAGNDRLEGRAGTDDLRGGTGDDY 596
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
L G D ++ G D + L + GSD
Sbjct: 597 LDGGTGGDYIDAGTGSDTVIGGTGDDTIQLTADADRDEVILEDGSGSDLIYNFD 650
Score = 44.8 bits (104), Expect = 0.043, Method: Composition-based stats.
Identities = 39/400 (9%), Positives = 86/400 (21%), Gaps = 63/400 (15%)
Query: 39 RLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRY 98
S T L + V + +N + P S
Sbjct: 283 TGSSGDTLLGGAGNDQITINAASGGSVAPSGATVVTDGGSASGDYDSNDFAWNPGSSSSS 342
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS-----YNGGYPVYGVDNDY 153
+ + + + + + +
Sbjct: 343 SISMGGTPGTTGSDDVYDSITVLNTTDGAFLGVSQFDVGIDKVYLSEEPVSFTNTLASSG 402
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK--IYGAPKGSLGNNIYKIEV 211
+D +T D + + G Y +
Sbjct: 403 VSDFVVTYANGNTQSFRFYNDGGAAISDPAQFFGTSVISGATLSGGEGDDTLTGGYGADS 462
Query: 212 QQKDSPFIQTIY-DSGGDDLLDLTLIGGVKNYIDLN------------------------ 246
Q I D G+D + G ++ +DL+
Sbjct: 463 IDGGDGQDQIILQDGFGNDTITGGEGGVDQDSLDLSQLSSGAVITMSGPEAGTVTVGSDT 522
Query: 247 -----------------------TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+ + + + + TI + + + G +GND + G
Sbjct: 523 AQFSEIESITGTEKSDYIDGSAQSGNLAYVNSGGGDDTILGGSGNDDLQGGAGNDRLEGR 582
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ + +G+D DG +G D + A + + + + +D
Sbjct: 583 AGTDDLRGGTGDDYLDGGTGGD--YIDAGTGSDTVIGGTGDDTIQLTADADRD------E 634
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ D + + D + V G
Sbjct: 635 VILEDGSGSDLIYNFDLGDSGDGTTVDQLDVSGLTNLAGD 674
>gi|123090|sp|P22757|HE_PARLI RecName: Full=Hatching enzyme; Short=HE; Short=HEZ; AltName:
Full=Envelysin; AltName: Full=Sea-urchin-hatching
proteinase; Contains: RecName: Full=Hatching enzyme 18
kDa form; Flags: Precursor
gi|9996|emb|CAA37667.1| pre-pro-hatching enzyme [Paracentrotus lividus]
Length = 587
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 67/193 (34%), Gaps = 45/193 (23%)
Query: 27 FIRYKPDVLTTHRLSFDI----TELNPNA-QEVARWALGEWSKVVDLTFEETSIHS--DI 79
F+ +++ ++LN N ++ R A W V L+F E + DI
Sbjct: 167 FVTSSITWSRNQPVTYSFGALTSDLNQNDVKDEIRRAFRVWDDVSGLSFREVPDTTSVDI 226
Query: 80 KFISSNNGYVCTPRYDSRYF----------MEINFDKADVWRYGIGKGTILSHNALHEIG 129
+ + + +D R + +FD ++ W G GT L A HE G
Sbjct: 227 RIKFGSYDHGDGISFDGRGGVLAHAFLPRNGDAHFDDSETWTEGTRSGTNLFQVAAHEFG 286
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS-YFMPQDSMMDASFGYCATPMVSDI 188
H+LGL H + +++M Y+ DI
Sbjct: 287 HSLGLYHS-------------------TVRSALMYPYYQGYVPNFRLDN--------DDI 319
Query: 189 VAVQKIYGAPKGS 201
++ +YG+ GS
Sbjct: 320 AGIRSLYGSNSGS 332
>gi|56681792|gb|AAW21432.1| leukotoxin A [Pasteurellaceae bacterium I4]
Length = 394
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 40/101 (39%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N I ++ + G + TI + + + G G+D++ G + ++ GND
Sbjct: 225 GTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGND 284
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G G D F + I + + ++ + +D
Sbjct: 285 LLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSNLKDL 325
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 47/208 (22%), Gaps = 48/208 (23%)
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIV---------- 327
++ F SG DG G D Y +Y + V
Sbjct: 121 GEGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKAL 180
Query: 328 --------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ A + +D L VE + K
Sbjct: 181 HEVTSTHTALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDA 240
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + G D K G D ++ G +DL + D
Sbjct: 241 FNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNG-----DDFIDGGKGNDLLHGGKGDDI- 294
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASH 449
H G + D L + S+
Sbjct: 295 -FVHRKGDGNDIITDSDGNDKLSFSDSN 321
>gi|186681878|ref|YP_001865074.1| outer membrane adhesin like proteiin [Nostoc punctiforme PCC 73102]
gi|186464330|gb|ACC80131.1| putative outer membrane adhesin like proteiin [Nostoc punctiforme PCC
73102]
Length = 2156
Score = 65.2 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 70/224 (31%), Gaps = 11/224 (4%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
D + +DI+ + ++ G + + + +T+
Sbjct: 1896 GGSVSDTFDLTVANNKATSSNDIIFIDQLVGVSVLNA----LGGNDRVIGTDANETLSGG 1951
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
G+D +D L + ++ G N + + ++G ND ++G
Sbjct: 1952 AGNDYIDAKGGNDSL----LGNDGIDTLLGGAGNDILEGGAADDILLGELDNDTLLGGGG 2007
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N+ +GND +G + DT + + + +I + ++ D L+ +
Sbjct: 2008 NDSLNGGAGNDNLNGGADNDTLLGGLGNDILVGGGGNDHLIGWGGGTNEIDQLNG---AQ 2064
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
AD I Y D++ D + +
Sbjct: 2065 SADTYILGDASSVFYAKSGNGDYADIVSFKASDRIQLKGSADNY 2108
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/359 (13%), Positives = 87/359 (24%), Gaps = 31/359 (8%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + + T S + D + Y I L A+ +
Sbjct: 1759 TTGTKGTVTFNPTTQNLTYAASSFNSLAQGQTATDSFSYAIADSKGLQSTAI------VN 1812
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT--PMVSDIVAV 191
+ G + V +++ + S L S D + Y AT P SDI
Sbjct: 1813 VSVTGVNDAPTVVQPLEDRIISTSKLFSFNVGDKFTDIDRGDTLTYTATGLPTGSDIANT 1872
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
I+G + + K T + +ID S
Sbjct: 1873 GLIFGNISQAGIFAVTVTAADGKGGSVSDTF---DLTVANNKATSSNDIIFIDQLVG-VS 1928
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ N + E++ G +GND + N+ + G D G +G D
Sbjct: 1929 VLNALGGNDRVIGTDANETLSGGAGNDYIDAKGGNDSLLGNDGIDTLLGGAGNDIL--EG 1986
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
+ + + + L A + L
Sbjct: 1987 GAADDILLGELDNDTLLGGG-----------------GNDSLNGGAGNDNLNGGADNDTL 2029
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ +G D+ G D S D S A +
Sbjct: 2030 LGGLGNDILVGGGGNDHLIGWGGGTNEIDQLNGAQSADTYILGDASSVFYAKSGNGDYA 2088
>gi|332264806|ref|XP_003281419.1| PREDICTED: matrix metalloproteinase-28 [Nomascus leucogenys]
Length = 520
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 52/165 (31%), Gaps = 42/165 (25%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDGPGGALAHA 208
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD+ + W +G L HEIGH LGL H P P Y
Sbjct: 209 FLPRRGEAHFDQDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKRLGRD 268
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
S+ D++AVQ +YG P
Sbjct: 269 ALLSWD---------------------------DVLAVQSLYGKP 286
>gi|319894302|gb|ADV76432.1| RTX toxin RtxA [Vibrio vulnificus]
Length = 4715
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/224 (15%), Positives = 63/224 (28%), Gaps = 21/224 (9%)
Query: 228 DDLLDL---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
D D + ++++ +++ G + A + G G+DV
Sbjct: 4334 DKTFDFLRNSGHLQGDGDMNVSLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATG 4393
Query: 285 ANNVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+N+F GND + G G DT A + + +
Sbjct: 4394 TSNIFTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEI 4452
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D S + + + + + + G D ++ S G
Sbjct: 4453 DTGSGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNYNRVNASAGN 4512
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRG---AAARHYITHGVKEGRN 436
D+ L Y + N D AA + EGR+
Sbjct: 4513 DVVK-----LMGYHAVLNGGEGDDHLIAAAVSKFSQFNGGEGRD 4551
Score = 38.6 bits (88), Expect = 3.1, Method: Composition-based stats.
Identities = 41/312 (13%), Positives = 75/312 (24%), Gaps = 38/312 (12%)
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
Y +Y D S+++ + + V I A
Sbjct: 6 WRSVEYFFTGNYSADDGNNSIVAIGFGGEIHAYGGDDHVT---VGSIGATVYTGSGNDTV 62
Query: 202 LGNNIY----------------KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+G + Y K + + G +D G +Y
Sbjct: 63 VGGSAYLRVEDTTGHLSVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDVSYGGA 122
Query: 246 NTESWSSIGGYEKNMTI--AQHTVIESVVGSSGNDVVIGNSANNVFF--------ESSGN 295
+ + G N+T A + GN G A N S G+
Sbjct: 123 AAYNGITRKGLSGNVTFKGAGGYNALWHETNQGNLSFAGAGAGNKLDRTWFNRYQGSRGD 182
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD------VERLRFADQ 349
FDG+ ++ + + + L +ER R
Sbjct: 183 VTFDGAGAANSISSRVETGNITFRGAGADNHLVRKGKVGDITLQGAGASNRIERTR--QA 240
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQ-DVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ E Y L + D+ S Y +G +FD+ +
Sbjct: 241 EDVYAQTRGNIRFEGVGGYNSLYSDVAHGDIHFSGVGAYNTITRKGSGSSFDAQGMEYAK 300
Query: 409 DDLRNVFGSDRG 420
+ + +
Sbjct: 301 AEEIVLTAAQMH 312
Score = 37.5 bits (85), Expect = 7.4, Method: Composition-based stats.
Identities = 32/317 (10%), Positives = 76/317 (23%), Gaps = 33/317 (10%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ +G ++ +A G + + G + +
Sbjct: 4357 GNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNIFTGGEGNDMGVLMGREN-- 4414
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
+M D+ + A D + G + Y V +
Sbjct: 4415 -----MMFGGDGNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYV--VTSGNF 4467
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT--ESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ T D + + D +++ + N + + G
Sbjct: 4468 NRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNYNRVNASAGNDVVKLMGYHAVLNGG 4527
Query: 275 SGNDVVIGNSAN--NVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFEN 323
G+D +I + + + F G D F G + +D+F + +
Sbjct: 4528 EGDDHLIAAAVSKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRS 4587
Query: 324 AIIVYDANEH---------KQDFLSDV--ERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ D + E +DQ + + +I
Sbjct: 4588 EDNIVFNGVDWQKLWFERSGYDLKLSILREPASDSDQAKFEHIGSVTFSDYFNGNRAQVI 4647
Query: 373 QVIGQDVFESMKHFYEF 389
+G+ + +
Sbjct: 4648 IAMGEKDATGEREYTTL 4664
>gi|297272410|ref|XP_001114445.2| PREDICTED: matrix metalloproteinase-28 isoform 1 [Macaca mulatta]
Length = 520
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 52/165 (31%), Gaps = 42/165 (25%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDGPGGALAHA 208
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD+ + W +G L HEIGH LGL H P P Y
Sbjct: 209 FLPRRGEAHFDQDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKRLGRD 268
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
S+ D++AVQ +YG P
Sbjct: 269 ALLSWD---------------------------DVLAVQSLYGKP 286
>gi|297272408|ref|XP_002800423.1| PREDICTED: matrix metalloproteinase-28 isoform 2 [Macaca mulatta]
Length = 510
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 52/165 (31%), Gaps = 42/165 (25%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDGPGGALAHA 208
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD+ + W +G L HEIGH LGL H P P Y
Sbjct: 209 FLPRRGEAHFDQDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKRLGRD 268
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
S+ D++AVQ +YG P
Sbjct: 269 ALLSWD---------------------------DVLAVQSLYGKP 286
>gi|199128|gb|AAA39526.1| metalloelastase [Mus musculus]
Length = 462
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 58/183 (31%), Gaps = 45/183 (24%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ETS--------IH 76
L++ I P+ + + + A WS V L F E H
Sbjct: 102 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 161
Query: 77 SDIKFISSNNGY-VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + G + +FD+A+ W +GT L A+HE+GH+LGL
Sbjct: 162 GDFNYFDGKGGTLAHVFYPGPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLGLQ 220
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
H + S + Y P DI +Q +Y
Sbjct: 221 HSNNPK---------------SIMYPTYRYLNPST----------FRLSADDIRNIQSLY 255
Query: 196 GAP 198
GAP
Sbjct: 256 GAP 258
>gi|11935132|gb|AAG41981.1| matrix metalloproteinase 28 [Homo sapiens]
Length = 520
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 52/165 (31%), Gaps = 42/165 (25%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDGPGGALAHA 208
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD+ + W +G L HEIGH LGL H P P Y
Sbjct: 209 FLPRRGEAHFDQDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKRLGRD 268
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
S+ D++AVQ +YG P
Sbjct: 269 ALLSWD---------------------------DVLAVQSLYGKP 286
>gi|13236530|ref|NP_077278.1| matrix metalloproteinase-28 isoform 1 preproprotein [Homo sapiens]
gi|37538314|sp|Q9H239|MMP28_HUMAN RecName: Full=Matrix metalloproteinase-28; Short=MMP-28; AltName:
Full=Epilysin; Flags: Precursor
gi|12698338|gb|AAK01480.1|AF219624_1 matrix metalloproteinase-28 precursor [Homo sapiens]
gi|12698852|gb|AAK01706.1|AF330002_1 matrix metalloprotease MMP25 [Homo sapiens]
gi|37183092|gb|AAQ89346.1| metalloprotease [Homo sapiens]
gi|119600534|gb|EAW80128.1| matrix metallopeptidase 28, isoform CRA_a [Homo sapiens]
Length = 520
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 52/165 (31%), Gaps = 42/165 (25%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDGPGGALAHA 208
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD+ + W +G L HEIGH LGL H P P Y
Sbjct: 209 FLPRRGEAHFDQDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKRLGRD 268
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
S+ D++AVQ +YG P
Sbjct: 269 ALLSWD---------------------------DVLAVQSLYGKP 286
>gi|237747941|ref|ZP_04578421.1| predicted protein [Oxalobacter formigenes OXCC13]
gi|229379303|gb|EEO29394.1| predicted protein [Oxalobacter formigenes OXCC13]
Length = 1843
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/234 (16%), Positives = 75/234 (32%), Gaps = 8/234 (3%)
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H ++ +G ++ D+ + + + D + ++DI
Sbjct: 1547 EHSDLFDRPDSAFGPVDNGMADALIGGAGNDILYGQGGNDILIADGSHDSLTDIANYLGD 1606
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+G + E+ Q +++ DL D + +
Sbjct: 1607 HGVASMDHLDFSAGHELGQNIGVLGDALHNMNAHDLNDFANWAEGHLEGSGHGNGGDLLY 1666
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + +++VG GND++ G S N+ G+++ G SG DTF Y A
Sbjct: 1667 GGSGDDVLIGGAGHDTLVGGDGNDILFGGSGNDTLIGGHGDNILTGGSGNDTFKYNAGDL 1726
Query: 315 L-----YKIYRFENAIIVYDANEHKQ---DFLSDVERLRFADQCIDSVNVKQRS 360
I F + D N D L+ ++L + S Q
Sbjct: 1727 EGKTHGDSITDFHVGDVAKDGNADILDLKDLLTGADKLSGGASDLISGGYLQFE 1780
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/209 (11%), Positives = 49/209 (23%), Gaps = 31/209 (14%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH-----KQ 335
+ N + +GND+ G G D + +H
Sbjct: 1562 VDNGMADALIGGAGNDILYGQGGNDILIADGSHDSLTDIANYLGDHGVASMDHLDFSAGH 1621
Query: 336 DFLSDV--------------------------ERLRFADQCIDSVNVKQRSILEYTASYE 369
+ ++ E + +L A ++
Sbjct: 1622 ELGQNIGVLGDALHNMNAHDLNDFANWAEGHLEGSGHGNGGDLLYGGSGDDVLIGGAGHD 1681
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
L+ G D+ G +I + ++ G G + +
Sbjct: 1682 TLVGGDGNDILFGGSGNDTLIGGHGDNILTGGSGNDTFKYNAGDLEGKTHGDSITDFHVG 1741
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFAD 458
V + N D + + + L +D
Sbjct: 1742 DVAKDGNADILDLKDLLTGADKLSGGASD 1770
>gi|117618784|ref|YP_857965.1| hypothetical protein AHA_3491 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560191|gb|ABK37139.1| flagellin hook IN motif family [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 5047
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 5/112 (4%)
Query: 211 VQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
Q ++ + G+D+L D L GG N I ++ G N T+
Sbjct: 4837 DQSSNNDKADVLIGGDGNDILFGQGGDDFLFGGAGNDILFGGAGNDTLYGESGNDTLYGG 4896
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ +++ G SG+D + G N++ GND+ G G DTF +
Sbjct: 4897 SGNDTLYGGSGDDTLSGGLGNDILVGGLGNDILKGDGGADTFTWLQGDTAAG 4948
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 87/281 (30%), Gaps = 16/281 (5%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + + + + NG V + +M + V+ G G S + G
Sbjct: 4662 TYSVNGRTVVNGNGVVYDYNGNQIGYMRPDGAGRYVYATLAGTGNSTSSTTIANSVAGFG 4721
Query: 134 LMHPGSYN------GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS-FGYCATPMVS 186
L+ G Y Y++D + + ++ ++++ S + +
Sbjct: 4722 LLTGMGVTVEAIGLGANISYNDLKSYDSDGVIMTGVNASDLANAILGTSVNNLPGSDRID 4781
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
++G G N ++ + + D + N
Sbjct: 4782 GGAGDDILFGDAIHFAGINGEGYAAIKQYVAGKLSAGSVTDAQVHDYITDHASEFDQSSN 4841
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ + G + N + + + G +GND++ G + N+ + SGND G SG DT
Sbjct: 4842 NDKADVLIGGDGNDILFGQGGDDFLFGGAGNDILFGGAGNDTLYGESGNDTLYGGSGNDT 4901
Query: 307 FFYYAPSYLYKIYRFENAIIVYDA-------NEHKQDFLSD 340
+ S + I+ + D +
Sbjct: 4902 LY--GGSGDDTLSGGLGNDILVGGLGNDILKGDGGADTFTW 4940
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 60/375 (16%), Positives = 105/375 (28%), Gaps = 26/375 (6%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ ++ A+ + +G + N + I G N G D
Sbjct: 4584 SGGGTNYEDVFKTTANWFNSSTVQGNTNAKNLTYFI--TDGQPTFYLENEGSDPMIRDRS 4641
Query: 153 YENDSFLTS---VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ S SY Q ++ +V D Q Y P G G +Y
Sbjct: 4642 GTVNDVYLSNVIGTSYTYGQTYSVNGRTVVNGNGVVYDYNGNQIGYMRPDG-AGRYVYAT 4700
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-SWSSIGGYEKNMTIAQHTVI 268
+S TI +S L LT +G I L S++ + Y+ + I
Sbjct: 4701 LAGTGNSTSSTTIANSVAGFGL-LTGMGVTVEAIGLGANISYNDLKSYDSDGVIMTGVNA 4759
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS----GLDTFFYYAPSYLYKIYRFENA 324
+ + V ++ +G+D+ G + G++ Y A +
Sbjct: 4760 SDLANAILGTSVNNLPGSDRIDGGAGDDILFGDAIHFAGINGEGYAAIKQYVAGKLSAGS 4819
Query: 325 IIVYDANEHKQDFLSDVER---------LRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ +++ D S+ ++ L D L A + L
Sbjct: 4820 VTDAQVHDYITDHASEFDQSSNNDKADVLIGGDGNDILFGQGGDDFLFGGAGNDILFGGA 4879
Query: 376 GQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G D G D + D+ D L G+D T
Sbjct: 4880 GNDTLYGESGNDTLYGGSGNDTLYGGSGDDTLSGGLGNDILVGGLGNDILKGDGGADTFT 4939
Query: 431 VKEGRNPDAFKALEY 445
+G A +Y
Sbjct: 4940 WLQGDTAAGSVAKDY 4954
Score = 47.1 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 62/195 (31%), Gaps = 10/195 (5%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI---YKIEVQQKDSPFIQT 221
Y + D + + +V DI AV GN + + + Q+
Sbjct: 4142 YASFGYQISDGANLSNSGKLVIDITAVADKPVVDISLTGNGVPLYTQYPSSGISTGAFQS 4201
Query: 222 IYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG--N 277
+ G+ + + ++ + + + + + +VG +
Sbjct: 4202 GSFNKGNFGITSSFTDSTTTQDSVVGTSGNDYIVSVKGGGDYFVGGAGNDVLVGGNSVSG 4261
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD- 336
D + G + N++ G D G +G D Y I R + + E+
Sbjct: 4262 DTLDGGTGNDILVAGLGGDTLFGGAGTDLAVLMGSRANYVIERRSDGGFNFLVKENGVTI 4321
Query: 337 --FLSDVERLRFADQ 349
L D+E ++F D
Sbjct: 4322 SKSLYDIELVQFDDG 4336
>gi|85703938|ref|ZP_01035041.1| probable aggregation factor core protein MAFp3, isoform C
[Roseovarius sp. 217]
gi|85671258|gb|EAQ26116.1| probable aggregation factor core protein MAFp3, isoform C
[Roseovarius sp. 217]
Length = 1079
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/213 (19%), Positives = 61/213 (28%), Gaps = 24/213 (11%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG + + SI G + I+ + V +GND V G N+ G+D
Sbjct: 805 GGDSDDTIAGGDGDDSIEGGGGDDNISASDGNDFVDAGAGNDSVGGGIDNDTIIGGDGDD 864
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
V G D+ A A D L D
Sbjct: 865 VMGSGFGDDSV-------------SGGAGNDVVAGGAGNDTLEG------GDGADSMSGS 905
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDL 411
++ A +D+ GQD ++ + G EG D F D G D +
Sbjct: 906 FGNDLIFGGAGADDIGGGTGQDTIDAGAGNDQVGAGEGDDSVFGGDGNDFLAGGGRNDTI 965
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G+D A G + F +
Sbjct: 966 DGGAGNDTINAGAGNDVITGGTGADQFVFASFF 998
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 51/151 (33%), Gaps = 12/151 (7%)
Query: 203 GNNIYK---IEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIG 254
G+++ + + G+D L+ ++ G N + IG
Sbjct: 862 GDDVMGSGFGDDSVSGGAGNDVVAGGAGNDTLEGGDGADSMSGSFGNDLIFGGAGADDIG 921
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G TI + V G+D V G N+ ND DG +G DT A +
Sbjct: 922 GGTGQDTIDAGAGNDQVGAGEGDDSVFGGDGNDFLAGGGRNDTIDGGAGNDTI--NAGAG 979
Query: 315 LYKIYRFENAIIVYDAN--EHKQDFLSDVER 343
I A A+ E + D ++D E
Sbjct: 980 NDVITGGTGADQFVFASFFEGEADVVTDFED 1010
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/229 (15%), Positives = 70/229 (30%), Gaps = 24/229 (10%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ S + G+D + + T+IGG + + + S+ G N +
Sbjct: 825 GGDDNISASDGNDFVDAGAGNDSVGGGIDNDTIIGGDGDDVMGSGFGDDSVSGGAGNDVV 884
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A +++ G G D + G+ N++ F +G D G +G DT A + ++ E
Sbjct: 885 AGGAGNDTLEGGDGADSMSGSFGNDLIFGGAGADDIGGGTGQDTI--DAGAGNDQVGAGE 942
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
V+ D + ++ A + + G DV
Sbjct: 943 GDDSVFGG-----------------DGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVITG 985
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
+F + + D D + D + G
Sbjct: 986 GTGADQFVFASFFEGEADVVTDFEDGIDSFFIRRVDPDTGVENITNGGN 1034
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/356 (12%), Positives = 87/356 (24%), Gaps = 27/356 (7%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ G L+ +++ G + ++ + G +
Sbjct: 671 GFNATGTIFDNDFSNTLPTGAVTLNGSVVAGSTLTANTSSVADVDGLGPFSFQWLRNGEA 730
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
I++ G S ++ + DG +T A N +I+
Sbjct: 731 IDAATGDSY--TLLTLDIGSEIALRVAY--TDGEGTNETLISSASLVAPVPGTEGNDLIL 786
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ L + L D +E +++ G D ++
Sbjct: 787 AGPLGTLLEGLGGNDTLIGGDSDDTIAGGDGDDSIEGGGGDDNISASDGNDFVDAGAGND 846
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLR-NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G D G DD+ + FG D + G LE
Sbjct: 847 SVGGGIDNDTI-----IGGDGDDVMGSGFGDDSVS-----GGAGNDVVAGGAGNDTLEGG 896
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ + +F + G D D+ D + G D
Sbjct: 897 DGADSMSGSFGNDLIFGGAGADDIGG-------GTGQDTIDAGAGNDQVGAGEGDD---- 945
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
+ G ++ A ++ + + G D F + EG
Sbjct: 946 -SVFGGDGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVITGGTGADQFVFASFFEG 1000
>gi|148235497|ref|NP_001087063.1| stromelysin-1 [Xenopus laevis]
gi|50417744|gb|AAH77966.1| Mmp13-prov protein [Xenopus laevis]
Length = 458
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 58/192 (30%), Gaps = 44/192 (22%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI-HSDIKF 81
W I Y+ T +E++ + R WS V L F++ + +DI
Sbjct: 84 WQKTTITYRILNYTPD---ITKSEVDYAIAQAFRV----WSDVTPLNFQKLNSVDADILI 136
Query: 82 ISSNNGYVCTPRYDS-------------RYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D + +FD+ + W G I A HE
Sbjct: 137 SFNTKAHGDFNSFDGPNGVLAHAYAPAEGIGGDAHFDEDEQWTLGPQGANI-FLVAAHEF 195
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H N + S+ M + DI
Sbjct: 196 GHSLGLSHSNDPNA---------------LMFPTASFGMTINPAQ-------YKLSADDI 233
Query: 189 VAVQKIYGAPKG 200
+Q +YG
Sbjct: 234 AGIQTLYGRRNS 245
>gi|330943695|gb|EGH45989.1| calcium binding hemolysin protein [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 698
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 55/409 (13%), Positives = 109/409 (26%), Gaps = 70/409 (17%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + + D + +G G G + A L +
Sbjct: 214 GGAGNDTLNGGTGDDILDGGAGNDLLNGGAGDDTYLFGKGSGQDSIYYANESRLGKLDTV 273
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV---- 191
N D + S + M DA+ GY + +
Sbjct: 274 KLLGLNPSDVTISRDGYDLILKVNGTTDSLRIYYHFMGDATSGYQIDRIQFADGSFWDQT 333
Query: 192 ---QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
++ + + Y+ + +I SGG+D L G +
Sbjct: 334 FIKTEVLRSTDANQSLTGYETDDVINAGVGDDSISGSGGNDTL----SGEAGDDTVSGGT 389
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G T+ + + G GND + G + N+V SGND+ +G +G DT+
Sbjct: 390 GNDTLIGGSGADTLNGDDGDDLLQGGVGNDNLYGGNGNDVLDGGSGNDLLNGGNGDDTYL 449
Query: 309 YYAPSYLYKIY-------------------------------------RFENAIIVYDAN 331
+ S ++Y +++ V
Sbjct: 450 FGKGSGQDRVYYANETRADKLDTVKLIDLNAGDVSLSRDGYDLVIRVNGTTDSLRVVYHF 509
Query: 332 EHKQDFLSDVERLRFADQCI------------------DSVNVKQRSILEYTASYEDLIQ 373
++ ++FAD ++ A + +
Sbjct: 510 MGDATAGYQIDHIQFADGSFWDQTAIKTQIMQGTAADETLSGTSADDTIDAGAGDDTVNG 569
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSD 418
+ G D ++G D+ D LY G D+ + +
Sbjct: 570 MAGSDTLSGGAGADTLNGNDGNDVLQGGADDDVLYGGDGSDVLDGGAGN 618
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 59/452 (13%), Positives = 114/452 (25%), Gaps = 57/452 (12%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D + D+ GIG + + G
Sbjct: 4 SGGGGNDTLLGGAGADRLNGDDGNDLLQGGTGNDILNGGIGNDILDGGAGNDRLDGGAG- 62
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+Y G Y ++ V + + D + A ++ I
Sbjct: 63 --DDAYLFGKGSGQDTIYYAYEARAGKVDTVKLSDLKASDITISRDAADLIIRINDTTDS 120
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS-------GGDDLLDLTLIGGVKNYIDLNT 247
G+ ++ + S G D D +L G + I
Sbjct: 121 MQVLNHFAGDAATGYQIDRIQFADGSFWDQSIIKLQVLKGSDA-DQSLTGYAGDDIIDAG 179
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL--- 304
++ G N T++ + ++++ G G+D + G + N+ +G+D+ DG +G
Sbjct: 180 AGDDAVSGGAGNDTLSGGSGLDTISGDEGDDNLNGGAGNDTLNGGTGDDILDGGAGNDLL 239
Query: 305 ------DTFFYYAPSYLYKIY-------------------------------------RF 321
DT+ + S IY
Sbjct: 240 NGGAGDDTYLFGKGSGQDSIYYANESRLGKLDTVKLLGLNPSDVTISRDGYDLILKVNGT 299
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+++ +Y ++R++FAD + +L T + + L DV
Sbjct: 300 TDSLRIYYHFMGDATSGYQIDRIQFADGSFWDQTFIKTEVLRSTDANQSLTGYETDDVIN 359
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ S G D N A G +
Sbjct: 360 AGVGDDSISGSGGNDTLSGEAGDDTVSGGTGNDTLIGGSGADTLNGDDGDDLLQGGVGND 419
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
L ++ L + G D +
Sbjct: 420 NLYGGNGNDVLDGGSGNDLLNGGNGDDTYLFG 451
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 55/470 (11%), Positives = 101/470 (21%), Gaps = 33/470 (7%)
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
+ D+ G G + + GL S + G + +
Sbjct: 166 SLTGYAGDDIIDAGAGDDAVSGGAGNDTLSGGSGLD-TISGDEGDDNLNGGAGNDTLNGG 224
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG--NNIYKIEVQQKDSP 217
T + + T + IY A + LG + + + + D
Sbjct: 225 TGDDILDGGAGNDLLNGGAGDDTYLFGKGSGQDSIYYANESRLGKLDTVKLLGLNPSDVT 284
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV-------IES 270
+ G DL+ I + ++ G + A + E
Sbjct: 285 ISR-----DGYDLILKVNGTTDSLRIYYHFMGDATSGYQIDRIQFADGSFWDQTFIKTEV 339
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ + N + G ++V G+D GS G DT + + +
Sbjct: 340 LRSTDANQSLTGYETDDVINAGVGDDSISGSGGNDTL--SGEAGDDTVSGGTGNDTLIGG 397
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE-- 388
+ L D L + L G D+
Sbjct: 398 SGADT--------LNGDDGDDLLQGGVGNDNLYGGNGNDVLDGGSGNDLLNGGNGDDTYL 449
Query: 389 FGLSEGRDITFDSYLYLGSYDD---LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
FG G+D + + D L ++ D + Y G +
Sbjct: 450 FGKGSGQDRVYYANETRADKLDTVKLIDLNAGDVSLSRDGYDLVIRVNGTTDSLRVVYHF 509
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ +G
Sbjct: 510 MGDATAGYQIDHIQFADGSFWDQTAIKTQIMQGTAADETLSGTSADDTIDAGAGDDTVNG 569
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHED---LINAFADAPDLVQAGKD 552
A G + + + D L AG D
Sbjct: 570 MAGSDTLSGGAGADTLNGNDGNDVLQGGADDDVLYGGDGSDVLDGGAGND 619
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 68/492 (13%), Positives = 123/492 (25%), Gaps = 32/492 (6%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
T + AD G + + +G +GG +
Sbjct: 1 DTVSGGGGNDTLLGGAGADRLNGDDGNDLLQGGTGNDILNGGIG---NDILDGGAGNDRL 57
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
D +D++L S +A G T +SD+ A + I +I
Sbjct: 58 DGGAGDDAYLFGKGSGQDTIYYAYEARAGKVDTVKLSDLKASDI---TISRDAADLIIRI 114
Query: 210 EVQQKDSPFIQTIYDSGGD----DLLDLTLIGGVKNYIDL-----NTESWSSIGGYEKNM 260
+ D + I +++ S+ GY +
Sbjct: 115 NDTTDSMQVLNHFAGDAATGYQIDRIQFADGSFWDQSIIKLQVLKGSDADQSLTGYAGDD 174
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I ++V G +GND + G S + G+D +G +G DT + +
Sbjct: 175 IIDAGAGDDAVSGGAGNDTLSGGSGLDTISGDEGDDNLNGGAGNDTL--NGGTGDDILDG 232
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
++ F L+ + DV
Sbjct: 233 GAGNDLLNGGAGDDT--------YLFGKGSGQDSIYYANESRLGKLDTVKLLGLNPSDVT 284
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI---THGVKEGRNP 437
S + G T +Y D + + DR A T E
Sbjct: 285 ISRDGYDLILKVNG--TTDSLRIYYHFMGDATSGYQIDRIQFADGSFWDQTFIKTEVLRS 342
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+D+INA + G + + + L
Sbjct: 343 TDANQSLTGYETDDVINAGVGDDSISGSGGNDTLSGEAGDDTVSGGTGNDTLIGGSGADT 402
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
+ G D + G + L+ + ++ L D L G +
Sbjct: 403 LNGDDGDDLLQ--GGVGNDNLYGGNGNDVLDGGSGNDLLNGGNGDDTYLFGKGSGQDRVY 460
Query: 558 GYEEGRSITFNP 569
E R+ +
Sbjct: 461 YANETRADKLDT 472
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/318 (15%), Positives = 88/318 (27%), Gaps = 21/318 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG- 133
S S T + I AD G + + G
Sbjct: 368 SGSGGNDTLSGEAGDDTVSGGTGNDTLIGGSGADTLNGDDGDDLLQGGVGNDNLYGGNGN 427
Query: 134 -LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
++ GS N D+ Y Y+ + D+ +
Sbjct: 428 DVLDGGSGNDLLNGGNGDDTYLFGKGSGQDRVYYANETRADKLDTVKLIDLNAGDVSLSR 487
Query: 193 KIYGAPKGSLGNN-----IYKIEVQQKDSPFIQTIYDSGGD--------------DLLDL 233
Y G +Y I I + G D
Sbjct: 488 DGYDLVIRVNGTTDSLRVVYHFMGDATAGYQIDHIQFADGSFWDQTAIKTQIMQGTAADE 547
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
TL G + ++ G + T++ +++ G+ GNDV+ G + ++V +
Sbjct: 548 TLSGTSADDTIDAGAGDDTVNGMAGSDTLSGGAGADTLNGNDGNDVLQGGADDDVLYGGD 607
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
G+DV DG +G D A +Y + +Y ANE + + V+ +
Sbjct: 608 GSDVLDGGAGNDRLDGGAGDDIYIFCKGAGQDSIYYANETRAGKMDTVKLTDLNASDVSV 667
Query: 354 VNVKQRSILEYTASYEDL 371
+ + + L
Sbjct: 668 TRDGMDLFIRVNGTTDSL 685
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/333 (11%), Positives = 87/333 (26%), Gaps = 43/333 (12%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E +D + D G T+ +
Sbjct: 337 TEVLRSTDANQSLTGYETDDVINAGVGDDSISGSGGNDTLSGEAGDDTVSGGTGNDTLIG 396
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G +G + G + + + + +++ G T +
Sbjct: 397 GSGADTLNGDDGDDLLQGGVGNDNLYGGNGNDVLDGGSGNDLLNGGNG-DDTYLFGKGSG 455
Query: 191 VQKIYGAPKGSLG--NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
++Y A + + + I++ D + G DL+ + +
Sbjct: 456 QDRVYYANETRADKLDTVKLIDLNAGDVSLSR-----DGYDLVIRVNGTTDSLRVVYHFM 510
Query: 249 SWSSIGGYEKNMTIAQHTVIES-------VVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
++ G ++ A + + + G++ ++ + G SA++ +G+D +G
Sbjct: 511 GDATAGYQIDHIQFADGSFWDQTAIKTQIMQGTAADETLSGTSADDTIDAGAGDDTVNGM 570
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G DT + D L+ D +
Sbjct: 571 AGSDTL----------------------SGGAGADTLNG------NDGNDVLQGGADDDV 602
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
L + L G D + + +G
Sbjct: 603 LYGGDGSDVLDGGAGNDRLDGGAGDDIYIFCKG 635
>gi|298293734|ref|YP_003695673.1| glycosyl transferase family 2 [Starkeya novella DSM 506]
gi|296930245|gb|ADH91054.1| glycosyl transferase family 2 [Starkeya novella DSM 506]
Length = 702
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 20/103 (19%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT-----FNPDLYLTSYD 577
F+ Y++++ D+ + ++H+ G EGR + F+ YL++
Sbjct: 450 GFERDWYLSAYADVAAS-------GMDAEEHYLRHGKGEGRFPSRAAAEFDRGGYLSANP 502
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEG----RALGISGMQFKSVM 616
D+ + HY HG EG R G Q +
Sbjct: 503 DV----AASGMDPFLHYCAHGKAEGRHFARIGGQGSPQLAAEA 541
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 15/88 (17%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD----AFKALEYIASHEDLI 537
F+ YL +Y D+ A HY+ HG EGR P F Y++++ D+
Sbjct: 450 GFERDWYLSAYADVAASG----MDAEEHYLRHGKGEGRFPSRAAAEFDRGGYLSANPDVA 505
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGRSI 565
+ P L H+ G EGR
Sbjct: 506 AS-GMDPFL------HYCAHGKAEGRHF 526
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 16/86 (18%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT-----FDSYLYLGSYD 493
F+ Y++++ D+ + D ++H+ G EGRF + FD YL +
Sbjct: 450 GFERDWYLSAYADVAASGMD-------AEEHYLRHGKGEGRFPSRAAAEFDRGGYLSANP 502
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGR 519
D+ HY HG EGR
Sbjct: 503 DVAASG----MDPFLHYCAHGKAEGR 524
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 15/87 (17%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD----AFKALEYIASHEDL 452
F+ YL +Y D+ A HY+ HG EGR P F Y++++ D+
Sbjct: 449 FGFERDWYLSAYADVAAS----GMDAEEHYLRHGKGEGRFPSRAAAEFDRGGYLSANPDV 504
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGR 479
+ D H+ G EGR
Sbjct: 505 AASGMDPFL-------HYCAHGKAEGR 524
Score = 44.4 bits (103), Expect = 0.062, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 27/85 (31%), Gaps = 14/85 (16%)
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----FDSYLYLGSYDD 410
+A + ++ +H+ G EGR + FD YL + D
Sbjct: 449 FGFERDWYLSAYADVAASG-----MDAEEHYLRHGKGEGRFPSRAAAEFDRGGYLSANPD 503
Query: 411 LRNVFGSDRGAAARHYITHGVKEGR 435
+ HY HG EGR
Sbjct: 504 VAAS----GMDPFLHYCAHGKAEGR 524
Score = 42.9 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQF 612
F D YL++Y D+ + A +HY+ HG EGR + +F
Sbjct: 449 FGFERDWYLSAYADV----AASGMDAEEHYLRHGKGEGRFPSRAAAEF 492
>gi|14030785|ref|NP_114395.1| interstitial collagenase A precursor [Mus musculus]
gi|78099009|sp|Q9EPL5|MMP1A_MOUSE RecName: Full=Interstitial collagenase A; AltName: Full=Matrix
metalloproteinase-1a; Short=MMP-1a; AltName:
Full=Mcol-A; Flags: Precursor
gi|11877304|emb|CAC18880.1| putative matrix metalloproteinase [Mus musculus]
gi|26340288|dbj|BAC33807.1| unnamed protein product [Mus musculus]
gi|28300432|gb|AAO37582.1| collagenase-like A [Mus musculus]
gi|109734590|gb|AAI17757.1| Matrix metallopeptidase 1a (interstitial collagenase) [Mus
musculus]
Length = 464
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 60/221 (27%), Gaps = 48/221 (21%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-------- 73
W+ + Y T + ++ A WS V LTF+
Sbjct: 105 RWTKTHLTYSILNYTPYLPK-------AVVEDAIARAFRVWSDVTPLTFQRVFEEEGDIV 157
Query: 74 -----SIHSDIK-FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
H D F N T + ++++D + W + A HE
Sbjct: 158 LSFHRGDHGDNNPFDGPNYKLAHTFQPGPGLGGDVHYDLDETWTNSSENFNLFYVTA-HE 216
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+GH+LGL H S + G ++ Y D L D
Sbjct: 217 LGHSLGLTH--SSDIGALMFPSYTWYTEDFVLNQ------------------------DD 250
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
I +Q +YG + I G+
Sbjct: 251 INRIQDLYGPSPNPIQPTGATTPHPCNGDLTFDAITTFRGE 291
>gi|188581620|ref|YP_001925065.1| GLUG domain protein [Methylobacterium populi BJ001]
gi|179345118|gb|ACB80530.1| GLUG domain protein [Methylobacterium populi BJ001]
Length = 14829
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 67/519 (12%), Positives = 136/519 (26%), Gaps = 53/519 (10%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRY-----------DSRYFMEINFDKADVWRYG 113
V + + + + +NG D + D ++ G
Sbjct: 13341 VAGVGADTVTTLGGADIVLGDNGAAVFAGGLRVSVASTAPADGGKDTLVLGDGDNLAIGG 13400
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
+ I + N I G + +Y+ + + + ++ + +
Sbjct: 13401 VDADAITTGNGADVILGDFGAV---TYDAAGLLKQILSTETGLGGDDTIEAGAGDNLVVG 13457
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL 233
T + +D++ G + + TI G +++
Sbjct: 13458 GFGADTITTEIGADVILGDS---GEVLYAGGRLVQARSLDAGIGGRDTIKADEGANIV-- 13512
Query: 234 TLIGGVKNYIDLNTESWSSIGGY----EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ G + I+ +G +AQ ++ +G G+D + + +N+
Sbjct: 13513 -IGGMDADVIETGAGRDVILGDSGLVRRDADGLAQAVSTDTALG--GDDTIRAGAGDNLV 13569
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
G D D +G D + L++ ++ DA D + E
Sbjct: 13570 LGGFGRDTIDTGAGADIVLGDSGEALFE-RGVVASVTTLDAVNGAGDTIRAGE------- 13621
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+++ + + G D + G S G + ++ D
Sbjct: 13622 --------GDNLVFGGLGGDAITTGAGNDAILGDQG--RAGFSGGVLVALETIDPNAGGD 13671
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
D D + G + DL A A V
Sbjct: 13672 DQIVAGDGDNLV----FGGAGADRIVTGAGADMILGDNGRADLALAGGRAVIRR-VASTD 13726
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH--YITHGVKEGRNPDAFKAL 527
G + + Y G+ D+ G H Y R F A
Sbjct: 13727 PLAGGDDRIEAGDGNDYAAGGTGADVILGGGGHDVLFGDHMLYDWALPVNQRAVSIFTAA 13786
Query: 528 EYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
++ + D Q G D +G E +T
Sbjct: 13787 TDGGGNDTIEGGAGDDFLYGQQGDD--RLYGGEGDDDLT 13823
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 50/508 (9%), Positives = 111/508 (21%), Gaps = 38/508 (7%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
++S + ++ +G L+ +AL +
Sbjct: 12282 VQSSRDGGARDSITSGAGADVVLGGLGADTIDAGRDDAESDIVLGDDGRLTFDALGRLKR 12341
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
A L + V G DN + ++ S + D + + + +
Sbjct: 12342 AESLDPTFGGDDSIDVGGGDNVVIGGTGSDTITSLSGNDVILGDNGYAVFEGGVRAAFAS 12401
Query: 191 VQKIYGAPKGSLGNN------IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
GA G + I G + D
Sbjct: 12402 TDPDDGARDVISGGDGDNIVIAAGGADDITTGAGADIILGDMGVVTFEN-GRVQEVYTTD 12460
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA------------------- 285
+ + + + + T + + G D+++G+
Sbjct: 12461 ERRGAGDVVRAGDGDNIVFGGTGRDEITTGKGADLILGDFGEASFTAGRLVRVASLNPNR 12520
Query: 286 --NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
++ G++V G G DT S + + +DVE
Sbjct: 12521 GDDDTIAAGDGDNVVLGGFGSDTI--TTGSGADVVLGDNGLATFRADGKRILVRTTDVEI 12578
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+++ + + G DV + +
Sbjct: 12579 ----GARDTIRAGDGDNLVIGGTEADAITTGKGADVILGDHGSVSYDADGLLKQILSTET 12634
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
LG+ D + + GSD +G + +
Sbjct: 12635 GLGANDTIASGDGSDTILGGFGSDAITAGDGAKTVLGDSGQ---LDYAAGVLAQVQTLTP 12691
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSY-DDLRNVFGSDRGAAARHYITHGVKEGRNPD 522
+G G + + D + + A
Sbjct: 12692 MIGAADTIRLGNGRKLVLGGAGGDTVEGQAGDAIVLGDAGLVRLADGSPVRVESTDVEVS 12751
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAG 550
+ A + ++ + AG
Sbjct: 12752 GDDTITLGAGNGVVLGGSGADKLTLGAG 12779
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 80/569 (14%), Positives = 144/569 (25%), Gaps = 81/569 (14%)
Query: 71 EETSIHSDIKFISSN----NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN--- 123
+ D + + I AD+ G T
Sbjct: 11642 VRLAETLDPTLGGDDEIQAGAGANLILGGAGSDTIITGAGADIVLGDNGSVTFAGGIRLE 11701
Query: 124 --------ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
A I G GG + D + D + + D++
Sbjct: 11702 VTSSREGGAADTITTGAGADVVLGGRGGDTIDAGKTDADADIVFGD--NGTVQFDALGRV 11759
Query: 176 SFGYCATPMVSDIVAVQKIYGAP-----------KGSLGNNIY-------KIEVQQKDSP 217
P + D V+ G GN++ E +
Sbjct: 11760 KRAESLDPGLGDDDTVEVGGGDNVVIGGAGSDTITALSGNDVVLGDEGRATFEADGRVKR 11819
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG---- 273
GG+D +D+ G N + S + ++ + E G
Sbjct: 11820 AESFDVGFGGNDTIDV---GAGDNVVIAGAGSDAVTALGGNDVILGDGGYAEFEAGLRAL 11876
Query: 274 -------SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+G D + +NV SGND +G D + +
Sbjct: 11877 VVSTDAAGAGADRLAMGDGDNVVLGGSGNDTIITGAGADIVL--GDNGRIAFAGGIRLEV 11934
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ D D + + +++ D VIG +
Sbjct: 11935 ITDRIGGGADT------ITTGAGADLVLGGLGGDVIDAGRDDADADIVIGDNGHV----T 11984
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
++ R +FD +G DD+R G + T G +
Sbjct: 11985 FDAIGRVIRAESFDP--GIGGNDDIRVGGGDNLIIGGTGADTVTALSGSDVIIGDNGY-- 12040
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF------- 499
A +A V+ S+ G + D+ + GS D
Sbjct: 12041 --------AVFEAGVRVEFAATDVSDGGNDRIEAGDGDNLVLGGSGSDTITTGKGADIVL 12092
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGY 559
G + A I + RN A ++ A + ++ D ++ +
Sbjct: 12093 GDNGLVAYELGIRARIVSDRNGGARDSIATGAGADVVLGGLGADTIDAG-KIDADADIVF 12151
Query: 560 EEGRSITFNPDLYLTSYDDLWNVFGSDRS 588
+ ITF+ + + L FG D +
Sbjct: 12152 GDNGQITFDAQGRVKRAESLDVGFGDDDT 12180
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 68/554 (12%), Positives = 140/554 (25%), Gaps = 60/554 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRY------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ I +NG R + D G G I
Sbjct: 13694 TGAGADMILGDNGRADLALAGGRAVIRRVASTDPLAGGDDRIEAGDGNDYAAGGTGADVI 13753
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
G H + + + + + D++ + D
Sbjct: 13754 LG--GGGHDVLFGDHMLYDWALPVNQRAVSIFTAATDGGGNDTIEGGAGDDFLYGQQGD- 13810
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLN 246
++YG +++ + ++ G D++ D +I D+
Sbjct: 13811 ---DRLYGGEG---DDDLTGGHNVLGGADGNDGLFGGDGADVILGDNGVITRNVLVDDVK 13864
Query: 247 TESWSSIGGY------------------EKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+W G N IA + + G G+D++ G ++
Sbjct: 13865 AVAWQRNPGPFSDTVMRDVLRFDLIDFVGGNDAIAGGAGDDRIFGQMGDDLIYGEEGSDE 13924
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFA 347
G D+ DG +G+D + + Y + + I+ +D L ++ + A
Sbjct: 13925 IVGGLGRDIIDGGAGVDYLLGDEGR-IVRAYGRDGSAILNSDGTWHRDVVLEEIGTVTAA 13983
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ + L + DL+ +G + G + + +
Sbjct: 13984 IATDAQSAAMRTAELAEKLAQADLVLAVGARDGAGAR--LTTGAGSTWATSALTLSLARA 14041
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
DD+ + + + +G + + S
Sbjct: 14042 DDDVIAGGEGNDVLFGQRGNDRLIGDGGDDLIYGDRASNLSETASDRPTIVNAIR----- 14096
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD-------RGAAARHYITHGVKEGRN 520
E G + F + + + + L FG+ A G R
Sbjct: 14097 --LIGAAAETGLVLPFGGEVVVPALNLLPGAFGAGAPRIEVYPSMAGVVSDIAGSDPIRR 14154
Query: 521 PDAFKALEYIASHEDLINA----FADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSY 576
D Y + L + AG D + +G + T + Y
Sbjct: 14155 SDGASLTVYASLVPSLYGTNNVLAGNDVIDGGAGND--TIYGDS-SETYTLDVTAYAALN 14211
Query: 577 DDLWNVFGSDRSAA 590
+ V S
Sbjct: 14212 GQIDKVAASASDLL 14225
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 63/482 (13%), Positives = 119/482 (24%), Gaps = 32/482 (6%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
+ S + R + + D G TIL I +G H
Sbjct: 10919 QVVLGDSGSATFENGRIATVTSVATEIGGGDTITASDGDTTILGGAGADGIAVGVG-NHV 10977
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+ G V+ V +S + D + I +
Sbjct: 10978 ILGDSGKAVFRVGQLVSVESIDPGI--GGDDAIEAKDGNATVIGGAGADRIT----LGQG 11031
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ LG++ V + + + GGDD + T + L +I
Sbjct: 11032 TQVVLGDSGSATFVDGVIATILSVATEIGGDDTITATG----GDTTILGGAGSDTIKVGA 11087
Query: 258 KNMTIAQHTV-----------IESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N I + IES+ G+D++ + +G D +G
Sbjct: 11088 GNHVILGDSGRAAFRNGRAQRIESITPEVGGDDIIEAEDGESRIIGGAGADRITTGAGNH 11147
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEY 364
+ + + A + +RF + +
Sbjct: 11148 VILGDSGEADFTVTATGAVTTSVLARIASTATAIGGADTIRFGAGSNVVLGGAGGDTITG 11207
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR-------NVFGS 417
++ G F++ LS I D + +G+ D++ +
Sbjct: 11208 ADRGAVILGDNGIVTFDA-AGRILRALSIDPAIGGDDTVTVGNGDNVVLGGTGRDAITVG 11266
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D E ++ D I + ++ G
Sbjct: 11267 DGNNVVLGDSGQADFEAGILVEIASISPEVGDRDTIAVGSGRNAILGGAGGDAITAGIRN 11326
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
G V + + +G R Y G + + A+ S D I
Sbjct: 11327 GAKVGTGTNVVIGDAGHARFTATGLPALVETTYDNVGGDDTISVGDGVAVILGGSGGDTI 11386
Query: 538 NA 539
A
Sbjct: 11387 TA 11388
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 64/496 (12%), Positives = 125/496 (25%), Gaps = 52/496 (10%)
Query: 101 EINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD----NDYEND 156
+ D R G G I+ + G NG +
Sbjct: 11998 DPGIGGNDDIRVGGGDNLIIGGTGADTVTALSGSDVIIGDNGYAVFEAGVRVEFAATDVS 12057
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPM------VSDIVAVQKIYGAPKGSLGNNIYKIE 210
+ + ++ S T + D V G + +
Sbjct: 12058 DGGNDRIEAGDGDNLVLGGSGSDTITTGKGADIVLGDNGLVAYELGIRARIVSDRNGGAR 12117
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG------------GYEK 258
+ G D +D I + + + + G+
Sbjct: 12118 DSIATGAGADVVLGGLGADTIDAGKIDADADIVFGDNGQITFDAQGRVKRAESLDVGFGD 12177
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS------------SGLDT 306
+ TI V+G +G+DVV N+V +G +F+ +G D
Sbjct: 12178 DDTIEVGGGDNIVLGGAGSDVVTALGGNDVLLGDNGYALFEAGVRVEFASTDTTDAGNDR 12237
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSIL 362
A + + + +RF S + R +
Sbjct: 12238 I--EAGDGDNLVLGGSGGDTLVTGKGADIMLGDNG-LVRFELGLRALVQSSRDGGARDSI 12294
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVFGSDRG 420
A + ++ +G D ++ + E + G D +TFD+ L + L FG D
Sbjct: 12295 TSGAGADVVLGGLGADTIDAGRDDAESDIVLGDDGRLTFDALGRLKRAESLDPTFGGD-- 12352
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR- 479
G S D+I + F++ ++G
Sbjct: 12353 ---DSIDVGGGDNVVIGGTGSDTITSLSGNDVILGDNGYAVFEGGVRAAFASTDPDDGAR 12409
Query: 480 ---FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ + + G+ + GR + + E + + +
Sbjct: 12410 DVISGGDGDNIVIAAGGADDITTGAGADIILGDMGVVTFENGRVQEVYTTDERRGAGDVV 12469
Query: 537 INAFADAPDLVQAGKD 552
D G+D
Sbjct: 12470 RAGDGDNIVFGGTGRD 12485
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 51/389 (13%), Positives = 90/389 (23%), Gaps = 40/389 (10%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ I Q + F T D D GG + D ++ A
Sbjct: 10465 DTITVEASQGTLALFGDTSADRSRYSATDSVRTGGAIGFRDEGAIDVDGSRVSLDDVIDA 10524
Query: 264 QHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY----KI 318
++ G +GND + G N+ +GND +G + D + L +
Sbjct: 10525 SGATGLVIIDGGAGNDTIKGGQGRNLIAGGTGNDRIEGGASADVILGDSSFNLDDVKRVV 10584
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQ---------------CIDSVNVKQRSILE 363
+ I A + + D + V + S
Sbjct: 10585 TIADPFIEQDRAKGDDTIDAKGGDNVILGDHGQIYQDGSETAGIALTGNHVVTRVVSTHT 10644
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS----------------YLYLGS 407
+ +I G +V G +
Sbjct: 10645 GVGGADTIIAADGNNVIIGGFGADTITAGAGNHVILGDNGEAVFAGGVLASLRSTAGATG 10704
Query: 408 YDDLRNVFGSDRG----AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
DD D A D +A + + +
Sbjct: 10705 GDDTITARDGDTTIIGGAGKDGIAVGAGTHVILGDTGEARFTPGTRTIGGVSVPVPVLIS 10764
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
D + G ++ +G R + G R + +GR
Sbjct: 10765 IKTADDEAAIGGDDSIETGNGDVTVIGGAGADRIILGKGRQVVLGDSGSATFVDGRIATI 10824
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKD 552
I ++ + + D L AG D
Sbjct: 10825 TSLATAIGGNDTITSVEGDTTILGGAGAD 10853
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/352 (11%), Positives = 87/352 (24%), Gaps = 42/352 (11%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + + + G D + N + L ++ G + +
Sbjct: 12346 DPTFGGDDSIDVGGGDNVVIGGTGSDTIT----SLSGNDVILGDNGYAVFEGGVRAAFAS 12401
Query: 264 QHTVI---ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + G G+++VI + +G D+ G G+ TF +Y
Sbjct: 12402 TDPDDGARDVISGGDGDNIVIAAGGADDITTGAGADIILGDMGVVTFENGRVQEVYTTDE 12461
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
A V A + +I+ +++ G D+
Sbjct: 12462 RRGAGDVVRAGD-------------------------GDNIVFGGTGRDEITTGKGADLI 12496
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
F + + L DD G + + + G D
Sbjct: 12497 LGDFGEASFTAGR---LVRVASLNPNRGDDDTIAAGDGDNVVLGGFGSDTITTGSGADVV 12553
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
+A+ F + V + R D+ + G+ D
Sbjct: 12554 LGDNGLAT-------FRADGKRILVRTTDVEIGARDTIRAGDGDNLVIGGTEADAITTGK 12606
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
H +G + +++ + + L G D
Sbjct: 12607 GADVILGDHGSVSYDADGLLKQILSTETGLGANDTIASGDGSDTILGGFGSD 12658
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 64/290 (22%), Gaps = 43/290 (14%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN--------------------- 277
+ + + S + G +I + V+G +G
Sbjct: 13211 GGRDVIVTGDGGSVVLGGFGADSIVTGAGADIVLGDNGAVTLAAFVPVFVRTTSAAVGDV 13270
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D + +NV G D SG DT F A + D D
Sbjct: 13271 DEIRAGEGDNVVLGGVGGDTIVTGSGRDTVFGDAGQIRFDAKGLVERAESLDTGIGGDDT 13330
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+++ + + + G D+ F +
Sbjct: 13331 ---------------IAAGPGDNLVVAGVGADTVTTLGGADIVLGDNGAAVFAGGLRVSV 13375
Query: 398 TFDSYLYLGS------YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+ G D + G D A + + A +
Sbjct: 13376 ASTAPADGGKDTLVLGDGDNLAIGGVDADAITTGNGADVILGDFGAVTYDAAGLLKQILS 13435
Query: 452 LINAFADAPDLVQVGKDHFSNFG-CEEGRFVTFDSYLYLGSYDDLRNVFG 500
+ D+ G + + + LG ++ G
Sbjct: 13436 TETGLGGDDTIEAGAGDNLVVGGFGADTITTEIGADVILGDSGEVLYAGG 13485
Score = 46.7 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 29/279 (10%), Positives = 64/279 (22%), Gaps = 32/279 (11%)
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN--------------------- 277
+ + + S + G +I + V+G +G
Sbjct: 12809 GGRDVIVTGDGGSVVLGGFGADSIVTGAGSDIVLGDNGAVTLSAFVPVVVRTTSAAVGEA 12868
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP---SYLYKIYRFENAIIVYDANEHK 334
D + +NV G+D SG DT F A + ++ +
Sbjct: 12869 DEIRAGEGDNVVLGGVGSDTIVTGSGRDTVFGDAGQIRFDAKGLVERAESLDTAIGGDDA 12928
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG---QDVFESMKHFYEFGL 391
+ + + + I+ + + L
Sbjct: 12929 IEAGAGDNLVVAGVGADTVTTLGGADIVLGDNGAAVFAGGLRVSVASTAPADGGKDTLML 12988
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
+G D+ + G+ D H G + +++
Sbjct: 12989 GDG-----DNLVIGGTEADAITTGSGADVILGDHGSVSYDAAGLLKQILSPDTGLGANDT 13043
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
+++ L G D + + Y
Sbjct: 13044 IVSGDGSDTILGGFGSDAITAGDGAKTVLGDSGQLDYAA 13082
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 49/373 (13%), Positives = 82/373 (21%), Gaps = 38/373 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINF-DKADVWRYGIGKGTILSHNALHEIGHALG 133
+ + F + + + I D G GK I H I G
Sbjct: 10682 DNGEAVFAGGVLASLRSTAGATGGDDTITARDGDTTIIGGAGKDGIAVGAGTHVILGDTG 10741
Query: 134 LM--HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV-- 189
PG+ G V + + I+
Sbjct: 10742 EARFTPGTRTIGGVSVPVPVLISIKTADDEAAIGGDDSIETGNGDVTVIGGAGADRIILG 10801
Query: 190 ----AVQKIYGAPKGSLG--------NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
V G+ G TI G D +++
Sbjct: 10802 KGRQVVLGDSGSATFVDGRIATITSLATAIGGNDTITSVEGDTTILGGAGADTIEV---- 10857
Query: 238 GVKNYIDLNTES--WSSIGGYEKNMTIAQHTVIESVVGS-SGNDVVIGNSANNVFFESSG 294
G N++ L G +I + V+G+ GN VIG + + G
Sbjct: 10858 GAGNHVILGDSGRALFDAGRLASIESIDSGIGGDDVIGAKDGNATVIGGAGADRITLGKG 10917
Query: 295 NDVFDGSSGLDTF----------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
V G SG TF I + + + +
Sbjct: 10918 MQVVLGDSGSATFENGRIATVTSVATEIGGGDTITASDGDTTILGGAGADGIAVGVGNHV 10977
Query: 345 RFAD---QCIDSVNVKQRSILEYTASYEDLIQV-IGQDVFESMKHFYEFGLSEGRDITFD 400
D + ++ +D I+ G L +G +
Sbjct: 10978 ILGDSGKAVFRVGQLVSVESIDPGIGGDDAIEAKDGNATVIGGAGADRITLGQGTQVVLG 11037
Query: 401 SYLYLGSYDDLRN 413
D +
Sbjct: 11038 DSGSATFVDGVIA 11050
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 51/441 (11%), Positives = 96/441 (21%), Gaps = 37/441 (8%)
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALG----LMHPGSYNGGYPVYGVDNDYEN 155
++ D G G +L I G L G + +
Sbjct: 11235 IDPAIGGDDTVTVGNGDNVVLGGTGRDAITVGDGNNVVLGDSGQADFEAGILVEIASISP 11294
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV-------AVQKIYGAPKGSLGN---- 204
+ ++ +++++ + G T + + V G + +
Sbjct: 11295 EVGDRDTIAVGSGRNAILGGAGGDAITAGIRNGAKVGTGTNVVIGDAGHARFTATGLPAL 11354
Query: 205 --NIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
Y + + I G D + + + +
Sbjct: 11355 VETTYDNVGGDDTISVGDGVAVILGGSGGDTITAGNGRSTVLGDNGQATFDAQGRVLQAA 11414
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
T A + + + G VVIG + SG DV G +G F +
Sbjct: 11415 TTAATAGLRDLITLGDGGSVVIGGVGADEIRTGSGADVILGDNGSAVFADGVLVSIETTD 11474
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT-------------- 365
A E V V + + +
Sbjct: 11475 STFGGGDRIVAGEGDNVVFGGVGADDITAGAGRDVILGDDGLATFAQGVLVRAATKNESV 11534
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY---LYLGSYDDLRNVFGSDRGAA 422
A + + G +V G DI F +L + G
Sbjct: 11535 AGDDTIRAGDGDNVVLGGSGNDTITTGIGADIVFGDNGAVDFLNGVRLEALSERAGGGGR 11594
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
G ++ + D F D + +
Sbjct: 11595 DVIATGAGADLVIGGLGGDLIDAGKTDADDDIVFGDNGHVTFDALGRVRLAETLDPTLGG 11654
Query: 483 FDSYLYLGSYDDLRNVFGSDR 503
D + + GSD
Sbjct: 11655 DDEIQAGAGANLILGGAGSDT 11675
Score = 45.2 bits (105), Expect = 0.032, Method: Composition-based stats.
Identities = 58/500 (11%), Positives = 111/500 (22%), Gaps = 43/500 (8%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRY--DSRYFMEINFDKADVWRYGIGKGTILSH 122
V + + + + +NG S D G G ++
Sbjct: 12939 VAGVGADTVTTLGGADIVLGDNGAAVFAGGLRVSVASTAPADGGKDTLMLGDGDNLVIGG 12998
Query: 123 NALHEIGHALG-----LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
I G H + + + D+++
Sbjct: 12999 TEADAITTGSGADVILGDHGSVSYDAAGLLKQILSPDTGLGANDTIVSGDGSDTILGGFG 13058
Query: 178 GYCATPM------VSDIVAVQKIYGAPKGSLGNNIY-KIEVQQKDSPFIQTIYDSGGDDL 230
T + D + G + + + G D
Sbjct: 13059 SDAITAGDGAKTVLGDSGQLDYAAGVLTLVQSLTPMIGAADTIRLGNGRKLVLGGAGGDT 13118
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH---TVIESVVGSSGNDVVIGNSANN 287
++ G + I L + + + ++V +GN +V+G S +
Sbjct: 13119 VE----GQTGDAIVLGDAGLVRLADGSPVRVESTDVEVSGDDTVTLGAGNGIVLGGSGAD 13174
Query: 288 VFFESSGNDVFDGSSGL-DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ER 343
+G V G +G D P + V + L
Sbjct: 13175 KLTLGAGRSVVLGDNGRVDLDAQARPVEIASTAPEVGGRDVIVTGDGGSVVLGGFGADSI 13234
Query: 344 LRFADQCIDSVNVKQRSILEY-----------TASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ A I + ++ + +++ G +V
Sbjct: 13235 VTGAGADIVLGDNGAVTLAAFVPVFVRTTSAAVGDVDEIRAGEGDNVVLGGVGGDTIVTG 13294
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
GRD F + D + + + G + A + L
Sbjct: 13295 SGRDTVFGDAGQIRF--DAKGLVERAESLDTGIGGDDTIAAGPGDNLVVAGVGADTVTTL 13352
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
A D + D + G D A IT
Sbjct: 13353 GGADIVLGDNGAAVFAGGLRVSVASTAPADGGKDTLVLGDGDNLAIGGVDADA-----IT 13407
Query: 513 HGVKEGRNPDAFKALEYIAS 532
G F A+ Y A+
Sbjct: 13408 TGNGADVILGDFGAVTYDAA 13427
Score = 40.5 bits (93), Expect = 0.87, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 46/187 (24%), Gaps = 22/187 (11%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-IGGVKNYIDLNTESWS--- 251
G +LG N Y + GDD + L IDL S S
Sbjct: 9132 GPNTITLGKNTYS--------TGAMNLIGGAGDDTVTLDGTYTLDALTIDLGGGSNSLTA 9183
Query: 252 -SIGGYEKNMTIAQHTVIESV----VGSSGNDVVIGNSANNVFFES-----SGNDVFDGS 301
+ + I + +++ ++G+ + N + + G
Sbjct: 9184 AGLYTVGGALAIRGGSGRDTLDLQGTYAAGSMEINAGDGQNDITLTGTYRIANAFTVRGG 9243
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
SG DT + A + + + I
Sbjct: 9244 SGNDTLLDFRTGGGAASPTNITAGSLSIDLGDGTNTVRLSGTYATPTGAITIRTGAGNDT 9303
Query: 362 LEYTASY 368
+ SY
Sbjct: 9304 FDLQGSY 9310
>gi|254466358|ref|ZP_05079769.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
Y4I]
gi|206687266|gb|EDZ47748.1| hemolysin-type calcium-binding region [Rhodobacterales bacterium
Y4I]
Length = 523
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 41/158 (25%), Gaps = 23/158 (14%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D + + I ++ G N I + + ++G SGND V GN +++
Sbjct: 330 DNAIFALGGDDIIRAGGGSDAVAGGSGNDDIRGGSGNDVILGGSGNDTVNGNRDDDIISG 389
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G+DV G SG D + D F + +
Sbjct: 390 GDGDDVLRGGSGNDVI-------------ADGRGSDLVLGGLGNDT------FIFTEAAL 430
Query: 352 DSVNVKQRSILEYTASYEDLI----QVIGQDVFESMKH 385
A + L +
Sbjct: 431 AGGGGASADTFRGGAGTDTLYLVLDGANFANFSAGGTG 468
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/194 (14%), Positives = 56/194 (28%), Gaps = 12/194 (6%)
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ + G G + I G+D ++ G + I +
Sbjct: 340 DIIRAGGGSDAVAGG---SGNDDIRGGSGNDVILGGSGNDTVN----GNRDDDIISGGDG 392
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G N IA + V+G GND I A + D F G +G DT +
Sbjct: 393 DDVLRGGSGNDVIADGRGSDLVLGGLGNDTFIFTEAALAGGGGASADTFRGGAGTDTLYL 452
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + V + + +E +R D ++ + +
Sbjct: 453 VLDGANFANFSAGGTGAVLSSLGI---TVFGIEFVRAIDGRSSIAAQL--DGFDWFQAAD 507
Query: 370 DLIQVIGQDVFESM 383
V +++
Sbjct: 508 SWGAVSAPQTGDAL 521
Score = 38.6 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 13/127 (10%), Positives = 26/127 (20%), Gaps = 37/127 (29%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
S ++ + +++ G+D G SG D
Sbjct: 327 GSKDNAIFALGGDDIIRAGGGSDAVAGGSGND---------------------------- 358
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+R + + + + G DV
Sbjct: 359 ---------DIRGGSGNDVILGGSGNDTVNGNRDDDIISGGDGDDVLRGGSGNDVIADGR 409
Query: 394 GRDITFD 400
G D+
Sbjct: 410 GSDLVLG 416
Score = 37.8 bits (86), Expect = 6.6, Method: Composition-based stats.
Identities = 18/182 (9%), Positives = 43/182 (23%), Gaps = 8/182 (4%)
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + + ++ L + +R + +
Sbjct: 307 FVMGGGKTALLDSGATDQGWGSKDNAIFALGGDDIIRAGGGSDAVAGGSGNDDIRGGSGN 366
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----FDSYLYLGSYDDLRNVFGSDRGAAA 423
+ ++ G D + +G D+ D D + G+D
Sbjct: 367 DVILGGSGNDTVNGNRDDDIISGGDGDDVLRGGSGNDVIADGRGSDLVLGGLGNDTFIFT 426
Query: 424 RHYITHGVKEGRNPDAFKALE---YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ G + A Y+ F+ + + FG E R
Sbjct: 427 EAALAGGGGASADTFRGGAGTDTLYLVLDGANFANFSAGGTGAVLSSLGITVFGIEFVRA 486
Query: 481 VT 482
+
Sbjct: 487 ID 488
>gi|155369235|ref|NP_001094401.1| matrix metallopeptidase 13 (collagenase 3) [Xenopus laevis]
gi|1223974|gb|AAC59870.1| collagenase-3 [Xenopus laevis]
Length = 472
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 42/149 (28%), Gaps = 21/149 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R W + Y+ T + D+ + AL WS V L F + +
Sbjct: 110 RKLKWPRNNLTYRIVNYTPDLSTSDVD-------RAIKKALKVWSDVTPLNFTRLRTGTA 162
Query: 78 DIKFISSNNGYV-CTPRYDSRY-----------FMEINFDKADVWRYGIGKGTILSHNAL 125
DI + P D KG L A
Sbjct: 163 DIMVAFGKKEHGDYYPFDGPDGLLAHAFPPGEKIGGDTHFDDDEMFSTDNKGYNLFVVAA 222
Query: 126 HEIGHALGLMHPGS-YNGGYPVYGVDNDY 153
HE GHALGL H + +PVY
Sbjct: 223 HEFGHALGLDHSRDPGSLMFPVYTYTETS 251
>gi|226947109|ref|YP_002802182.1| secreted bifunctional mannuronan C-5 epimerase/alginate lyase
[Azotobacter vinelandii DJ]
gi|34395511|sp|Q9ZFG9|ALGE7_AZOVI RecName: Full=Poly(beta-D-mannuronate) C5 epimerase 7; AltName:
Full=Mannuronan epimerase 7
gi|3873281|gb|AAD04921.1| mannuronan C-5-epimerase AlgE7 [Azotobacter vinelandii]
gi|226722036|gb|ACO81207.1| Secreted bifunctional mannuronan C-5 epimerase/alginate lyase
[Azotobacter vinelandii DJ]
Length = 856
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 77/534 (14%), Positives = 141/534 (26%), Gaps = 89/534 (16%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G N+ Y I+ + + + +S G + L G + + +++ I
Sbjct: 327 GNTIVGSANSTYGIQERADGTDYTSIGNNSVSGTQRGIVQLSGTNSTFSGRSGDAYQFID 386
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + + +VG SGND + G++ N+V +G+D G G D F + A S
Sbjct: 387 GSTGNDLLTGTPIADLIVGGSGNDTLSGDAGNDVLEGGAGSDRLTGGEGADIFRFTAVSD 446
Query: 315 LYKIY------------------------------RFENAIIVYDANEHKQDFLSDVER- 343
Y + + V ++ + +L E+
Sbjct: 447 SYYTASSSVADQILDFDASNDRIDLTGLGFTGLGDGYGGTLAVLANSDGSRTYLRSYEKD 506
Query: 344 -----------------------------LRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + IL+ + + L
Sbjct: 507 ADGRYFSLTLDGNFVGRLDDSNLVFRHKTIAGTEGDDSLTGNAMAEILDGGSGNDSLAGG 566
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
+G DV GRD L G D+ + A Y G
Sbjct: 567 LGNDVLRGGAGDDILNGGLGRD-----QLSGGEGADIF-----RFTSVADSYQNSGDNFS 616
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
F E L + + S FD+ ++
Sbjct: 617 DLILDFDPGEDRIDLSGLGFSGLGDGHNGTLLLWTSSETNRTY--LKNFDTDADGRRFEI 674
Query: 495 LRNVFGSDRGAAARHY---ITHGVKEGRNPDA---FKALEYIASHEDLINAFADAPDLVQ 548
SD + + G + G + L A + L D
Sbjct: 675 ALEGVFSDLSEKQLVFERLVLEGTRLGDQLSGTELNEELLGGAGRDILNGGAGDDILDGG 734
Query: 549 AGKDHFSNFGYEEGRSITFNPDLYLTSY-------DDLWNVFGSDRSAAAQHYITH-GMK 600
+ +D + G FN L D F + + G+
Sbjct: 735 SERD--TLTGGSGADVFRFNATLDSFRNYDNGTSRVDDITDFTVGEDLIDLSALGYSGLG 792
Query: 601 EGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYYDSDL 654
G ++ + K R+ F+ Y D +G++ ++L
Sbjct: 793 NGYDGTLAVLLNADGTKTYLKDRESDADGNHFEIALDGNYADQLSNGDFIFTNL 846
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 69/255 (27%), Gaps = 1/255 (0%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
++ F + + + AD+ G G T+ + G
Sbjct: 368 SGTNSTFSGRSGDAYQFIDGSTGNDLLTGTPIADLIVGGSGNDTLSGDAGNDVLEGGAGS 427
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + +SV + D+ D +
Sbjct: 428 DRLTGGEGADIFRFTAVSDSYYTASSSVADQILDFDASNDRIDLTGLGFTGLGDGYGGTL 487
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ + D + D LD + + I S+
Sbjct: 488 AVLANSDGSRTYLRSYEKDADGRYFSLTLDGNFVGRLDDSNLVFRHKTIAGTEG-DDSLT 546
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + +S+ G GNDV+ G + +++ G D G G D F + + +
Sbjct: 547 GNAMAEILDGGSGNDSLAGGLGNDVLRGGAGDDILNGGLGRDQLSGGEGADIFRFTSVAD 606
Query: 315 LYKIYRFENAIIVYD 329
Y+ + ++ D
Sbjct: 607 SYQNSGDNFSDLILD 621
>gi|307257044|ref|ZP_07538819.1| RTX toxin protein [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|306864415|gb|EFM96323.1| RTX toxin protein [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
Length = 1671
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 66/541 (12%), Positives = 134/541 (24%), Gaps = 114/541 (21%)
Query: 66 VDLTFEETSI---HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ F E++ + + + + I + D + G T L
Sbjct: 1072 AGVIFAESTDLKGDEKNNILLGSQKDNNL-SGSAGGDLLIGGEGNDTLKGSYGADTYLFS 1130
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
G ++ + D+ + ++Y +
Sbjct: 1131 KG------------HGQDVIYEYSDSANSKSDIDTLKFTDINYAEVKF------------ 1166
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+G+++ DS +++ Y+ L
Sbjct: 1167 -----------------RRVGDDLMLFGYHDTDSVTVKSFYNHEYYQFEKLEFADRSITR 1209
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+L + ++ G + + I + +GND + G+ ++ +GND+ GS
Sbjct: 1210 DELGKQGM-ALFGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTGNDILKGSY 1268
Query: 303 GLDTFFYYAPSYLYKIYRFEN--------------------------AIIVYDANEHKQD 336
G DT+ + IY + + + H D
Sbjct: 1269 GADTYLFSKGHGQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVGDDLMLFGYHDTD 1328
Query: 337 FLS----------DVERLRFADQCID----------SVNVKQRSILEYTASYED-LIQVI 375
++ E+L FAD+ I + A ++ L
Sbjct: 1329 SVTVKSFYSHEYYQFEKLEFADRSISRDELIKAGLHLYGTDGNDEINDHADWDSILEGGK 1388
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D+ + S+G + Y D N S R + E +
Sbjct: 1389 GNDILRGSYGADTYIFSKGH-----GQDVIYEYSDSAN---SKRDIDTLKFTDVNYAEVK 1440
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDD 494
L L V+ DH + F E +
Sbjct: 1441 FRRVDDDLM-------LFGYHDTDSVTVKSFYDHEYYQFEKLEFADRSITRDELGKQG-- 1491
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+FG+D + + + + LI + G D +
Sbjct: 1492 -MALFGTDGDDDINDWGRN--SVIDAGAGNDTINGGYGDDTLIGGKGNDILKGSYGADTY 1548
Query: 555 S 555
Sbjct: 1549 L 1549
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 39/102 (38%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + +GND + G ++ GND+ GS G DT+ +
Sbjct: 1494 LFGTDGDDDINDWGRNSVIDAGAGNDTINGGYGDDTLIGGKGNDILKGSYGADTYLFSKG 1553
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
IY + ++ + + + L F+ + D +
Sbjct: 1554 HGQDVIYEYSDSASSKSDIDTLKFTDIGLSELWFSRENNDLI 1595
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 54/361 (14%), Positives = 106/361 (29%), Gaps = 90/361 (24%)
Query: 140 YNGGYPVYGVDNDYE-NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
G ++G D D + ND SV+ D++ + + + ++ YGA
Sbjct: 1213 GKQGMALFGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTGNDI-LKGSYGAD 1271
Query: 199 KG-----SLGNNIYKIEVQQKDSPFIQTIYDSG-----------GDDLLDLTLIGGVKNY 242
+ IY+ I T+ + GDDL+
Sbjct: 1272 TYLFSKGHGQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVGDDLMLFGYHDTDSVT 1331
Query: 243 ID--LNTESWSSIGGYEKNMTIAQHTVIE---SVVGSSGNDVVIGN-SANNVFFESSGND 296
+ + E + + +I++ +I+ + G+ GND + + +++ GND
Sbjct: 1332 VKSFYSHEYYQFEKLEFADRSISRDELIKAGLHLYGTDGNDEINDHADWDSILEGGKGND 1391
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENA--------------------------IIVYDA 330
+ GS G DT+ + IY + ++ +
Sbjct: 1392 ILRGSYGADTYIFSKGHGQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVDDDLMLF 1451
Query: 331 NEHKQDFLS----------DVERLRFADQCID---------------------------- 352
H D ++ E+L FAD+ I
Sbjct: 1452 GYHDTDSVTVKSFYDHEYYQFEKLEFADRSITRDELGKQGMALFGTDGDDDINDWGRNSV 1511
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE--FGLSEGRDITFDSYLYLGSYDD 410
+ + LI G D+ + F G+D+ ++ S D
Sbjct: 1512 IDAGAGNDTINGGYGDDTLIGGKGNDILKGSYGADTYLFSKGHGQDVIYEYSDSASSKSD 1571
Query: 411 L 411
+
Sbjct: 1572 I 1572
>gi|3183022|sp|P91953|HE_HEMPU RecName: Full=50 kDa hatching enzyme; Short=HE; Short=HEZ; AltName:
Full=Envelysin; AltName: Full=Sea-urchin-hatching
proteinase; Contains: RecName: Full=38 kDa hatching
enzyme; Contains: RecName: Full=32 kDa hatching enzyme
non-specific; Contains: RecName: Full=15 kDa peptide;
Flags: Precursor
gi|1816431|dbj|BAA19171.1| hatching enzyme [Hemicentrotus pulcherrimus]
Length = 591
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 60/180 (33%), Gaps = 40/180 (22%)
Query: 34 VLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFISSNNGYVCT 91
+ LS D+++ + R A W V LTF E S DI+ + +
Sbjct: 184 TYSFGTLSNDLSQ--TAIKNELRRAFQVWDDVSSLTFREVVDSSSVDIRIKFGSYEHGDG 241
Query: 92 PRYDSRYF----------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+D + + +FD ++ W G GT L A HE GH+LGL H
Sbjct: 242 ISFDGQGGVLAHAFLPRNGDAHFDDSERWTIGTNSGTNLFQVAAHEFGHSLGLYHS---- 297
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
D + Y+ + + DI + +YG GS
Sbjct: 298 --------------DVQSALMYPYYRGYNPNFNLDR--------DDIAGITSLYGRNTGS 335
>gi|83310374|ref|YP_420638.1| Type V secretory pathway [Magnetospirillum magneticum AMB-1]
gi|82945215|dbj|BAE50079.1| Type V secretory pathway [Magnetospirillum magneticum AMB-1]
Length = 3563
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 66/506 (13%), Positives = 123/506 (24%), Gaps = 51/506 (10%)
Query: 11 ERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTF 70
+ L ++ + F D T ++ I N LG ++ +TF
Sbjct: 2910 DPAVQALGANESMTKTFTVTSADGTDTQEVTVTINGSNDGPVVSGPVDLGATAEDHSITF 2969
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ I ++ V + N D + + ++ GH
Sbjct: 2970 TAQQLLGHASDIDGDSLSVSNLSAGNGTI-SQNADGSYTFTPNADFNGEVNVTYTVSDGH 3028
Query: 131 ALGLMHPGSYNGGYPVYG-VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
S++ G +D S D + +A T VS++
Sbjct: 3029 GGTTSGSASFDVTSVNDGPTTSDVTLASGTEDRSVTIKASDLLGNAHDVDGDTLSVSNLS 3088
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQ---QKDSPFIQTIYDSGGDDLLDLTLI---------- 236
A + Y + T+ D G
Sbjct: 3089 A----SNGTITDNHDGTYTFTPNHDFSGNVDLSYTVSDGQGGSTAGTAHFGMAAVADSPV 3144
Query: 237 -GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+DL ++ G N T++ + + V GSSG+DV+ G+ +V + +
Sbjct: 3145 LSASNITVDLGAGQAQTLNGTTGNDTLSGGSGNDVVNGSSGDDVLYGDGTGSVTVPLNIS 3204
Query: 296 DVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQD------------ 336
D + G ++ S + + + A
Sbjct: 3205 DRLSDTDGSESLGSVTIGGLPAGASLSAGTHNSDGTWTLTPAQLTGLSVTTTEGTALHLS 3264
Query: 337 -FLSDVERLRFADQCID-------SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ E + S L+ A + L G D
Sbjct: 3265 VTATSTEASNGSTATTTTSFDVSFSGTAAGNDTLDGGAGNDTLFGGAGNDTLTGGAGADL 3324
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+G D+ S S + G A T A
Sbjct: 3325 LEGGDGNDVLNYSTDGTWSGGFVSQNVGDTTHAGTNETYTITGDNDSQ----DVFRGGAG 3380
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFG 474
+ L+ + + G G
Sbjct: 3381 TDTLVMGSGNDALFLDDGYSGSPTGG 3406
Score = 44.0 bits (102), Expect = 0.085, Method: Composition-based stats.
Identities = 33/271 (12%), Positives = 63/271 (23%), Gaps = 7/271 (2%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ + + T S + DV + N +
Sbjct: 3152 VDLGAGQAQTLNGTTGNDTLSGGSGNDVVNGSSGDDVLYGDGTGSVTVPLNISDRLSDTD 3211
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G GS G G + + + + A + + +
Sbjct: 3212 GSESLGSVTIGGLPAGASLSAGTHNSDGTWTLTPAQLTGLSVTTTEGTALHLSVTATSTE 3271
Query: 193 KIYGAPKGSLGNNIYKI------EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
G+ + + T++ G+D L + D N
Sbjct: 3272 ASNGSTATTTTSFDVSFSGTAAGNDTLDGGAGNDTLFGGAGNDTLTGGAGADLLEGGDGN 3331
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI-GNSANNVFFESSGNDVFDGSSGLD 305
S G ++Q+ + G++ + N + +VF +G D SG D
Sbjct: 3332 DVLNYSTDGTWSGGFVSQNVGDTTHAGTNETYTITGDNDSQDVFRGGAGTDTLVMGSGND 3391
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
F I D
Sbjct: 3392 ALFLDDGYSGSPTGGARIDGIESIVAGEGND 3422
>gi|260574702|ref|ZP_05842705.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
gi|259023119|gb|EEW26412.1| Hemolysin-type calcium-binding region [Rhodobacter sp. SW2]
Length = 1542
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 59/383 (15%), Positives = 101/383 (26%), Gaps = 21/383 (5%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS-GGDDLLDLTLIGG-VKNYI 243
DI A Y G +I I V +P I D GDD++D +G + I
Sbjct: 310 GDIGANSFTYTVEDGLGNTDIGFITVNTTTAPAADGIVDGTSGDDMIDTAYLGDPDGDRI 369
Query: 244 DLNT-------ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
D + + N T+ + V G +G D + G + F S+G D
Sbjct: 370 DAGDALLAGQVGEDDIVVAGDGNDTVVAGLGDDVVYGGAGQDSLYGEDGADTLFGSTGAD 429
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ +G G D + L + + + S V + F ++ +
Sbjct: 430 MLEGGLGADVLVGGDDADLIRGASGDVVDGGEGGTDQDTLTASGVLTIAFDPGNPENGTI 489
Query: 357 KQRS---ILEYTASYEDLIQVIGQDVFESMKHFYEFGLS----EGRDITFDSYLYLGSYD 409
+ + L + G G I ++ G+
Sbjct: 490 TFIDNSTLTFSNIEHLILNGGNPDGIVYGTAAADLIGAGYVDVNGDVIDNGDAIFAGAGP 549
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
D VF D + G + + + + D + D
Sbjct: 550 DDDEVFAGDGNDTV--FSGAGDDDVYGGNDQDVIHTGIGN-DYAQGDTGDDTVYGDAGDD 606
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
F D + VFG D Y +G +
Sbjct: 607 FLRGDAGSDSVYGGDGNDSVYGGLGTDQVFGGDGNDYI--YGGYGDDTVYGGAGNDTITG 664
Query: 530 IASHEDLINAFADAPDLVQAGKD 552
++ + D G D
Sbjct: 665 SGENDLVYGDDGDDFMQGSNGAD 687
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/362 (14%), Positives = 92/362 (25%), Gaps = 58/362 (16%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+++Y Q I D D D T+ G + S+ G + N ++
Sbjct: 569 DDDVYGGNDQDVIHTGI--GNDYAQGDTGDDTVYGDAGDDFLRGDAGSDSVYGGDGNDSV 626
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ V G GND + G ++ + +GND GS D +
Sbjct: 627 YGGLGTDQVFGGDGNDYIYGGYGDDTVYGGAGNDTITGSGENDLVY-------------- 672
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
++ + + LI +G D
Sbjct: 673 --------------------------------GDDGDDFMQGSNGADTLIGGLGADTMLG 700
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG---VKEGRNPDA 439
+ F G + + G+ +D +V G + +G G
Sbjct: 701 EEDADSFYGGAGDYVDGYETVTTGTDNDTLHVEGVASVSWDPFNSENGTITFTAGGTLAF 760
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL--GSYDDLRN 497
+ + G +G + + + DDL
Sbjct: 761 YNIENLFVDGVLTTRPDGTVSGTAGNDLIDTAYLGDPDGDRIDNNDASLVGHAPNDDLVV 820
Query: 498 VF-GSDRGAA----ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G D A Y G + +L + + L + L + G D
Sbjct: 821 AGDGFDTVMAGLGDDTVYGGAGQDVLYGGEGDDSLLGGDNADLLFTDAGNDSLLGEGGDD 880
Query: 553 HF 554
F
Sbjct: 881 SF 882
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 47/159 (29%), Gaps = 7/159 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L G + I+ + S +GG + I ++++G +G D + G +
Sbjct: 1130 DYVLAGAGDDTIESGLGNDSVLGG-DGADGIFGGAGADTLLGEAGADYIEGGDGADTLDG 1188
Query: 292 SSGNDVFDGSSGLDTFFYYAPS----YLYKIYRFENAIIVYDANEHKQDFL--SDVERLR 345
+ ND G G D + + IY + L + L
Sbjct: 1189 GADNDELYGGLGDDLVQGGSGADWLEGDLGIYSSIGGNDTLQGGDGSDTILGNRGNDLLT 1248
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ L+ + L+ +D F
Sbjct: 1249 GDAGDDSLLGEAGADTLDGGLGADTLLGGDDRDTFLVGA 1287
Score = 45.5 bits (106), Expect = 0.026, Method: Composition-based stats.
Identities = 24/175 (13%), Positives = 52/175 (29%), Gaps = 7/175 (4%)
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+D+ + + + + D FG + I G + +
Sbjct: 1136 AGDDTIESGLGNDSVLGGDGADGIFGGAGADTLLGEAGADYIEGGDGADTLDGGAD-NDE 1194
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ G D L I + ++ G + + TI + + +
Sbjct: 1195 LYGGLGDDLVQGGSGADWL------EGDLGIYSSIGGNDTLQGGDGSDTILGNRGNDLLT 1248
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G +G+D ++G + + G D G DTF A + ++ +
Sbjct: 1249 GDAGDDSLLGEAGADTLDGGLGADTLLGGDDRDTFLVGAGDVVDGGNGGDDYDTL 1303
Score = 43.6 bits (101), Expect = 0.095, Method: Composition-based stats.
Identities = 42/323 (13%), Positives = 83/323 (25%), Gaps = 22/323 (6%)
Query: 204 NNIYKIEVQQKDSPFIQTIYD----SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + + + + D SG D L + +D + + ++
Sbjct: 1003 DTLLGFDAPIDNGDGTYSGVDTLDVSGMTDALGNPVNVADVTVLDDGMGNAVLLFPGGES 1062
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFES-SGNDVFD----GSSGLDTFFYYAPSY 314
+T+ TV ++ + I + E +G D+ D G G D A
Sbjct: 1063 LTLVGVTVAAVSSPAALEALGIPPVPPDGIVEGTAGGDLIDTSYLGDPGGDRI--DASDA 1120
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
L E+ ++ A + + + + D L A + +
Sbjct: 1121 LLPGAAPEDDYVLAGAGDDTIESGLGNDSVLGGDGADGIFGGAGADTLLGEAGADYIEGG 1180
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D + E G D+ DL + G
Sbjct: 1181 DGADTLDGGADNDELYGGLGDDLVQGGSGADWLEGDLG-----------IYSSIGGNDTL 1229
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ D + ++ L D L + G D + D +L D
Sbjct: 1230 QGGDGSDTILGNRGNDLLTGDAGDDSLLGEAGADTLDGGLGADTLLGGDDRDTFLVGAGD 1289
Query: 495 LRNVFGSDRGAAARHYITHGVKE 517
+ + +G
Sbjct: 1290 VVDGGNGGDDYDTLDLSAYGWGN 1312
Score = 42.9 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 72/469 (15%), Positives = 127/469 (27%), Gaps = 37/469 (7%)
Query: 91 TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD 150
T R D D D G G + +N +GHA + +G V
Sbjct: 773 TTRPDGTVSGTAGNDLIDTAYLGDPDGDRIDNNDASLVGHAPNDDLVVAGDGFDTVMAGL 832
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP----KGSLGNNI 206
D + Y D + + ++ G G ++
Sbjct: 833 GDDTVYGGAGQDVLYGGEGDDSLLGGDNADLLFTDAGNDSLLGEGGDDSFQITDGFGTDV 892
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + + GD +LDL+ N S +++ +
Sbjct: 893 VVGGETGETFGDVLNVSSMTGDVVLDLSAG---------NPASDEDGTLTSGTDSLSF-S 942
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
IE++V GNDVVIG+S ++ G D DG +G DTF +A +
Sbjct: 943 QIEAIVLGGGNDVVIGSSGDDFVAVGWGADSIDGGAGNDTFEMEFD---------GDADV 993
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ A+ D L + L+ + + +G V +
Sbjct: 994 INFADGDGADTLLGFDAPI----DNGDGTYSGVDTLDVSGMTD----ALGNPVNVADVTV 1045
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVF--GSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ G+ + + V + G+ EG
Sbjct: 1046 LDDGMGNAVLLFPGGESLTLVGVTVAAVSSPAALEALGIPPVPPDGIVEGTAGGDLIDTS 1105
Query: 445 YIA-SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
Y+ D I+A D+ ++ + LG G+
Sbjct: 1106 YLGDPGGDRIDASDALLPGAAPEDDYVLAGAGDDTIESGLGNDSVLGGDGADGIFGGAGA 1165
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G D L+ A +++L D +G D
Sbjct: 1166 DTLL---GEAGADYIEGGDGADTLDGGADNDELYGGLGDDLVQGGSGAD 1211
>gi|154148762|ref|YP_001406981.1| Ig family protein [Campylobacter hominis ATCC BAA-381]
gi|153804771|gb|ABS51778.1| Ig family protein [Campylobacter hominis ATCC BAA-381]
Length = 2245
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 80/251 (31%), Gaps = 11/251 (4%)
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
+ D + G TI + A G + G Y ++ ND+
Sbjct: 740 NGTIYGNEGDDTLKGYSGDDTIYGGEGDDILIGASGDDFLQG-DSGDDTYVFGKEWGNDT 798
Query: 158 FLTSVMSYFM---PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL---GNNIYKIEV 211
+ D + + SD+ IY K + + Y +
Sbjct: 799 INNFDRNGTDKIKFTDGISKYDLIFARGVKNSDVTNDLFIYSKDKKNSIKITDFFYSYQS 858
Query: 212 QQKDSPFIQTIYDSG----GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
++ +D+G +DL L L G + + + + E + +
Sbjct: 859 IDENRKIDLIEFDNGEILKSEDLKYLVLQGSKYDDVIRGYDEDFTFDAGEGSDIVFAGNK 918
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G+ G+D + G N+ +GND G G DT+ + +IY I+
Sbjct: 919 NDKIFGNDGDDTLYGEDGNDTLIGGTGNDTLQGGDGDDTYIFNLGDGKDEIYESSGNDII 978
Query: 328 YDANEHKQDFL 338
+ +D L
Sbjct: 979 EFGDGISKDSL 989
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 77/284 (27%), Gaps = 12/284 (4%)
Query: 68 LTFEETSIHSDIKFISSNN-----GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
LTF + S I F + + I D G G +
Sbjct: 1623 LTFNDIKKASMIGFDEDDTIKGYDDADNFISTSAGDDKIIGGIFNDTIIGGSGNDKLQGG 1682
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
+ LG + D+ + +
Sbjct: 1683 DGDDTYIFNLGDGKDIITERELSEPYLIRQDSFDTVKFTKGVNKDDILLSRNGDDLIIKN 1742
Query: 183 PMVSDIVAVQ-KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
D + V+ + + + N+I + D +I G D D +
Sbjct: 1743 KTNGDEITVKNHFFLSNRYYKINSIEFDDGTIWDEKYIDHNAVYYGSDANDELSGYMGND 1802
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG------NDVVIGNSANNVFFESSGN 295
I +I G++ + I + + G +G ND + G + N+ GN
Sbjct: 1803 DIIKADSGNDTIYGFDGDDEIYGEDGDDYLSGGNGIEKNTGNDKLYGGAGNDQLRGEDGN 1862
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
D +G SG D ++Y I + +D LS
Sbjct: 1863 DYLNGGSGDDRYYYSYGDGFDTIENEGGGSDSLIFFDITRDRLS 1906
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 34/87 (39%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S G E + TI +++ G+ G+D + G N+ +GND G G D + +
Sbjct: 1227 SYIGKESDDTIYGLNSNDTIKGNDGDDTLYGEDGNDTLIGGTGNDKLIGGKGDDIYIFNL 1286
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFL 338
+IY + +D L
Sbjct: 1287 GDGKDEIYEESGNDTIEFGKGISKDSL 1313
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 80/266 (30%), Gaps = 17/266 (6%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ FI++N R I ++ + + N +I
Sbjct: 262 INGKESFDFITTNEILDYMIRPSDESDELIGYNDHSYTINALDGNDTIITNIKDDILIGG 321
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G +Y D+ ND+ + + + + + + +D+V +Q
Sbjct: 322 KGDDTLIGKAGNDIYIFGKDFGNDTIIEENNDKNVIKFTDGISKDDLLFKKLNNDLVILQ 381
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ +S + ++D G + +I+L + SS
Sbjct: 382 NKNSVIIKDM------FNGASINSKIDKIVFDDG--------SSITNREFINLAVANSSS 427
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
E + I + GND +I N N+V +G+D G G DT+ +
Sbjct: 428 ---NENDTLIGYFDDDYVLDALDGNDTIITNGGNDVLIGGAGDDTLKGGKGNDTYKFELN 484
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFL 338
I + K+D +
Sbjct: 485 HGKDIIEDNIGKETIVINGRTKEDLI 510
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 53/149 (35%), Gaps = 10/149 (6%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEV----QQKDSPFIQTIYDSGGD-----DLLDLTLIGGV 239
+A IY + ++I IQ+I + G D+L+L+ + G
Sbjct: 57 LANLIIYVTNENGEKDSITVQNAFCLINDLGDGIIQSITFADGTKLSKDDILNLSPLKGS 116
Query: 240 KNYIDL-NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+L T + N I + + G SG+D + G N++ +GND
Sbjct: 117 DEADNLYLTNENDILNAGNGNDEIHGKKGDDIINGDSGDDRLFGGIGNDILNGGTGNDEL 176
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G G DT+ + I + +
Sbjct: 177 YGEDGNDTYVFSKNWGKDTIVDNQGLNSI 205
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 21/135 (15%)
Query: 196 GAPKGSLGNNIY-KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + IY I ++ TIY G+D ++ + +I
Sbjct: 1446 GDDTINANGTIYAGIGDDTINANG--TIYAGSGNDTINASG----------------TIY 1487
Query: 255 GYEKNMTIAQHTVIESVVGSSG--NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ N I I++ G+ V + N G+D GS + + +
Sbjct: 1488 AEDGNDNINATGFIDAGNGNDIVTASDVYSSEEFNTIIGGKGDDELHGSYSNEKYIFSKG 1547
Query: 313 SYLYKIYRFENAIIV 327
+IY +
Sbjct: 1548 DGKDEIYENGGNDTI 1562
Score = 37.5 bits (85), Expect = 7.0, Method: Composition-based stats.
Identities = 33/230 (14%), Positives = 63/230 (27%), Gaps = 25/230 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ GDD +G K+ I S + + T+ +
Sbjct: 1666 FNDTIIGGSGNDKLQGGDGDDTYIF-NLGDGKDIITERELSEPYLIRQDSFDTVKFTKGV 1724
Query: 269 ---ESVVGSSGNDVVIGNSAN-------NVFFESSGNDVFDGSSGLD-----------TF 307
+ ++ +G+D++I N N N FF S+ + D
Sbjct: 1725 NKDDILLSRNGDDLIIKNKTNGDEITVKNHFFLSNRYYKINSIEFDDGTIWDEKYIDHNA 1784
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
YY ++ + + A + D + + + + +E
Sbjct: 1785 VYYGSDANDELSGYMGNDDIIKA-DSGNDTIYGFDGDDEIYGEDGDDYLSGGNGIEKNTG 1843
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ L G D G D + Y Y +D + N G
Sbjct: 1844 NDKLYGGAGNDQLRGEDGNDYLNGGSGDDRYY--YSYGDGFDTIENEGGG 1891
Score = 37.5 bits (85), Expect = 7.7, Method: Composition-based stats.
Identities = 23/183 (12%), Positives = 46/183 (25%), Gaps = 38/183 (20%)
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD------------------ 329
+ G+D G+ G D + + IY + +
Sbjct: 1 MINGKGGDDKLYGAGGDDLYEFDKNFGNDIIYDTQGNNEIVFTKGITKEDLSFKRELANL 60
Query: 330 -------ANEHKQDFLSD------------VERLRFADQCIDSVNVKQR-SILEYTASYE 369
E + + ++ + FAD S + S L+ + +
Sbjct: 61 IIYVTNENGEKDSITVQNAFCLINDLGDGIIQSITFADGTKLSKDDILNLSPLKGSDEAD 120
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+L D+ + E +G DI + + N + Y
Sbjct: 121 NLYLTNENDILNAGNGNDEIHGKKGDDIINGDSGDDRLFGGIGNDILNGGTGNDELYGED 180
Query: 430 GVK 432
G
Sbjct: 181 GND 183
>gi|327269114|ref|XP_003219340.1| PREDICTED: stromelysin-1-like [Anolis carolinensis]
Length = 507
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 61/202 (30%), Gaps = 56/202 (27%)
Query: 25 NYFIRYK-PDVLTTHRLSFDITELNPNAQ-----EVARWALGEWSKVVDLTFEET-SIHS 77
F + L++ I + + A WS+V LTF + +
Sbjct: 127 GGFATFAMSPKWGVKDLTYSIQNYTQKMEPADIDDAIERAWKMWSEVTPLTFTRVYNGSA 186
Query: 78 DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI+ + +P + E++F+ VW +
Sbjct: 187 DIRISFVTGNHGDIRPFQKGDNQLAHAFSPAFGG----EVHFNDDIVWTKDLAGINF-FI 241
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH+LGL H S L ++M P T
Sbjct: 242 VAAHEFGHSLGLYHS-------------------SVLKALMFALYPTTD--------PKT 274
Query: 183 PMV--SDIVAVQKIYGAPKGSL 202
+ DI +Q +YG P+ +
Sbjct: 275 LRLHKDDIKGIQSLYGTPEVNT 296
>gi|213514500|ref|NP_001133996.1| Collagenase 3 [Salmo salar]
gi|209156092|gb|ACI34278.1| Collagenase 3 precursor [Salmo salar]
gi|223647246|gb|ACN10381.1| Collagenase 3 precursor [Salmo salar]
gi|223673123|gb|ACN12743.1| Collagenase 3 precursor [Salmo salar]
Length = 473
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 57/195 (29%), Gaps = 46/195 (23%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
++ W + Y+ + T ++ AL W+KV L F S +D
Sbjct: 105 NRKWQTNRVTYRIENYTPDMSVAEVD-------NSIERALQVWAKVSPLRFTRIYSGIAD 157
Query: 79 IKFISS-------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
I + + + +FD + + + +G L A
Sbjct: 158 IMISFGTRNHGDSYPFDGPDGTLAHAFSPGADIGGDAHFDDDESFSFSSTRGYNLFLVAA 217
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GH+LGL H + V SY P +
Sbjct: 218 HEFGHSLGLSHSTDPGA---------------LMFPVYSYTNPST----------FSLPR 252
Query: 186 SDIVAVQKIYGAPKG 200
D+ +Q IYG
Sbjct: 253 DDVNGIQYIYGPNTD 267
>gi|225543094|ref|NP_001139410.1| interstitial collagenase isoform 2 [Homo sapiens]
gi|194387426|dbj|BAG60077.1| unnamed protein product [Homo sapiens]
Length = 403
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 53/185 (28%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 42 RWEQTHLTYRIENYTPDLPRADVD-------HAIEKAFQLWSNVTPLTFTKVSEGQADIM 94
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 95 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLHRVAA 151
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 152 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIG---PQT 208
Query: 183 PMVSD 187
P D
Sbjct: 209 PKACD 213
>gi|302564017|ref|NP_001181006.1| matrix metalloproteinase-25 [Macaca mulatta]
Length = 483
Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 52/157 (33%), Gaps = 27/157 (17%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ TT + + ++ + AL WS V L+F + +DI
Sbjct: 117 WKKNILTYRVSKYTT-------SMSSAEVEKAVQMALQAWSSAVPLSFVRINSGEADIMI 169
Query: 82 ISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
N + P + +FD A+ W G G L A H
Sbjct: 170 SFENGDHGDSYPFDGPRGTLAHAFAP--GEGLGGDTHFDNAEKWTMGT-NGFNLFTVAAH 226
Query: 127 EIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSV 162
E GHALGL H YP Y N Y V
Sbjct: 227 EFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKDDV 263
>gi|240138996|ref|YP_002963471.1| hypothetical protein MexAM1_META1p2412 [Methylobacterium extorquens
AM1]
gi|240008968|gb|ACS40194.1| Hypothetical protein MexAM1_META1p2412 [Methylobacterium extorquens
AM1]
Length = 15830
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/316 (13%), Positives = 71/316 (22%), Gaps = 34/316 (10%)
Query: 226 GGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV---VGSSGN 277
G DD +D+ GG + + G + A +E GN
Sbjct: 12707 GDDDTIDVGGGDNLVIGGTGADVITTLGGNDIVLGDQGYALFAAGVRVEVASAETSDGGN 12766
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY-----------RFENAII 326
D + +NV SGND +G D ++ F
Sbjct: 12767 DRIETGDGDNVVLGGSGNDTITTGAGADLVLGDDGRATFETSGRVKRAESFDLGFGGNDT 12826
Query: 327 VYDANEHKQDFLSD----VERLRFADQCIDSVNVKQRSILE---------YTASYEDLIQ 373
+ V L +D I + A + +
Sbjct: 12827 IDVGTGDNVVIAGAGSDVVTALGGSDAVIGDGGYAEFEAGMRVVFVSADATGAGNDRIAV 12886
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLY--LGSYDDLRNVFGSDRGAAARHYITHGV 431
G +V G D+ L V GA+ G
Sbjct: 12887 GDGDNVVLGGSGTDTITTGAGADVVLGDNGTIRFAGGIRLEIVSDRIGGASDTIITGAGA 12946
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
++ + D F D + + F D G
Sbjct: 12947 DLVLGGLGGDTIDAGQADTDADIVFGDNGHVTFDATGGVIRAESFDAGFGGNDEIKVGGG 13006
Query: 492 YDDLRNVFGSDRGAAA 507
+ + G+D A
Sbjct: 13007 GNLVIGGTGADIVTAL 13022
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 72/526 (13%), Positives = 134/526 (25%), Gaps = 45/526 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + F + + R I AD+ G+G TI + + G
Sbjct: 12219 DNGSVTFAGGIRLELTSGRDGGAADTIITGAGADLVLGGLGADTIDAGKNDADADIVFG- 12277
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G + + + ++ + T +
Sbjct: 12278 DNGHVTFDGPGRVKRAESLDFGLGDDDSIDVGGGDNIVVGGTGADRITAL---------- 12327
Query: 195 YGAPKGSLGNNI-YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G LG++ E + GG+D +D+ G N + S
Sbjct: 12328 -GGNDVVLGDDGRATFETSGRVQRAESFDLGFGGNDTIDV---GTGDNVVIAGAGSDVVT 12383
Query: 254 GGYEKNMTIAQHTVIESVVG-----------SSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ I E G +GND + +NV SG D +
Sbjct: 12384 ALSGNDAVIGDGGYAEFEAGMRVVFVSADATGAGNDRIAVGDGDNVVLGGSGTDTITTGA 12443
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D + + IV D D + A + + +I
Sbjct: 12444 GAD--VVLGDNGTIRFAGGIRLEIVSDRIGGASDT-----IVTGAGADLVLGGLGGDTID 12496
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
A + D+ F + G G D+++ G +
Sbjct: 12497 AGQADTD-------ADIVFGDNGHVTFDATGGVIRAESFDAGFGGNDEIKVGGGDNLVIG 12549
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
G + Y+ + FA G + G + +
Sbjct: 12550 GTGADIVTALGGGDIVIGDNG-YVVFAAGVRIEFAS--TDTADGGNDRIEVGDGDNLVIG 12606
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 542
+ + V G + A I V RN A + A + ++
Sbjct: 12607 GSGSDTVTTGAGGDIVLGDNGLVAYELGIRARVVSDRNGGARDVIATGAGADVVLGGLGA 12666
Query: 543 APDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRS 588
D ++ + + ITF+ + + L FG D +
Sbjct: 12667 DTIDAGR-LDTDADVVFGDDGQITFDAQGRVKRAESLDPGFGDDDT 12711
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 64/534 (11%), Positives = 114/534 (21%), Gaps = 32/534 (5%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
SD + D G G +L +
Sbjct: 12840 AGSDVVTALGGSDAVIGDGGYAEFEAGMRVVFVSADATGAGNDRIAVGDGDNVVLGGSGT 12899
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
I G G ++ + +
Sbjct: 12900 DTITTGAG----ADVVLGDNGTIRFAGGIRLEIVSDRIGGASDTIITGAGADLVLGGLGG 12955
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG-----VK 240
I A Q A N + GG+D + + G
Sbjct: 12956 DTIDAGQADTDADIVFGDNGHVTFDATGGVIRAESFDAGFGGNDEIKVGGGGNLVIGGTG 13015
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESV---VGSSGNDVVIGNSANNVFFESSGNDV 297
I + G IE GND + +N+ SG+D
Sbjct: 13016 ADIVTALGGGDIVIGDNGYAVFEAGVRIEFASTDTADGGNDRIEAGDGDNLVIGGSGSDT 13075
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+G D +++ + + + +
Sbjct: 13076 ITTGAGADVVLGDNGLATFELGIRARVVSDRNGGARDV--------IATGAGADVVLGGL 13127
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-DSYLYLGSYDDLRNVFG 416
++ + D V G D + +E D+ F D D + G
Sbjct: 13128 GADTIDAGQADTDADLVFGDDGQITFDAQGRVKRAESLDVGFGDDDEIKVGGGDNLVIGG 13187
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
+ V F+A + + G++
Sbjct: 13188 AGSDVVTALGGNDIVLGDHGYAVFEAGVRVEFASTDTTDAGNDRIEAGDGENIVLGGSGS 13247
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ + LG +R G I V+ R+ L A + +
Sbjct: 13248 DTVVTGTGGDIVLGDNGLVRFERG----------IRAVVQSSRDGGTRDVLRSGAGADVV 13297
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
+ ++GR +TF+ L + L FG D A
Sbjct: 13298 LGGLGADTIDAGRDDADADIVLGDDGR-LTFDAQGRLKRAESLDPTFGDDVIEA 13350
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 56/484 (11%), Positives = 110/484 (22%), Gaps = 28/484 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG- 133
+ + F + + AD+ G+G TI + + +G
Sbjct: 11985 DNGSVIFAGGIRLEAKSDLSGGARDTIVTGAGADLVIGGLGGDTIDAGKLDADDDIVIGD 12044
Query: 134 LMHPGSYNGGYPVYGVDNDYEN---DSFLTSVMSYFMPQDSMMDA-SFGYCATPMVSDIV 189
H G + D DS + + + D + G A ++ D
Sbjct: 12045 SGHITFDELGRVIRAEATDPTGGGDDSIDVGGGNNIVIGGAGSDTITTGAGADVVLGDNG 12104
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
V G + + + + G D +D + + +
Sbjct: 12105 FVTFTGGIRLEAKSDPAGGARDTIRTGAGADLVIGGLGGDTIDAGKDDADDDIVFGDNGH 12164
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ + + S G+D + S NN+ +G+D +G D
Sbjct: 12165 VTFDELGRVKLAQSLDP------TSGGDDSIEAGSGNNIVLGGAGSDTITTGAGADVVLG 12218
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S + D + + ++ +
Sbjct: 12219 DNGSVTFAGGIRLELTSGRDGGAADT--------IITGAGADLVLGGLGADTIDAGKNDA 12270
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
D V G + + +E D + V G +
Sbjct: 12271 DADIVFGDNGHVTFDGPGRVKRAESLDFGLGDDDSIDVGGGDNIVVGGTGADRITALGGN 12330
Query: 430 GVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
V G + F+ + E F + D+ G D
Sbjct: 12331 DVVLGDDGRATFETSGRVQRAESFDLGFGGNDTIDVGTGDNVVIAG------AGSDVVTA 12384
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
L D + G A + + ++
Sbjct: 12385 LSGNDAVIGDGGYAEFEAGMRVVFVSADA--TGAGNDRIAVGDGDNVVLGGSGTDTITTG 12442
Query: 549 AGKD 552
AG D
Sbjct: 12443 AGAD 12446
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 65/485 (13%), Positives = 133/485 (27%), Gaps = 44/485 (9%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T D + D ++ G TI + I G SY+ +
Sbjct: 14369 ASTAPTDGGKDTLLLGDGDNLALGGADADTITTGKGADVILGDFG---SISYDAAGLLTQ 14425
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
V + ++ + + T + +D++ G + +
Sbjct: 14426 VLSTDTGLGGDDTIEAGAGDNLVLGGFGADTITTEIGADVILGDS---GEVLYAGGRLVQ 14482
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY----EKNMTIAQ 264
I G +++ + G + I+ + +G +AQ
Sbjct: 14483 ARSLDAGIGGRDAIKAGEGANIV---IGGMDADVIETGSGRDVILGDSGLVRRDADGLAQ 14539
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
++ +G G+D + + +N+ G+D D +G D + +++ +
Sbjct: 14540 AVSTDTALG--GDDAIRAGAGDNLVLGGFGSDTIDTGAGADIVLGDSGDARFEL-GVIAS 14596
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ DA D + E +++ + + G D+ +
Sbjct: 14597 VTTLDALNGAGDTIRAGE---------------GDNLVFGGLGGDAITTGTGNDILVGDQ 14641
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G S G + ++ DD D + + GV R A
Sbjct: 14642 G--RAGFSGGILVVLETIDPSAGGDDQIVAGNGD------NLVLGGVGADRIITGMGADM 14693
Query: 445 YIASHEDLINA-FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ + A A + +V G + + ++ G+ D+ G
Sbjct: 14694 ILGDNGRADLALVAGRAVIRRVASTDPLAGGDDRIEAGDGNDFVAGGTGADVILGGGGHD 14753
Query: 504 GAAARH--YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
H Y R F A ++ + D Q G D G
Sbjct: 14754 VLFGDHMLYDRALPVNQRAVSIFTAATDGGGNDSIEGGAGDDFLYGQQGDD--WLSGGAG 14811
Query: 562 GRSIT 566
IT
Sbjct: 14812 DDDIT 14816
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/453 (11%), Positives = 100/453 (22%), Gaps = 19/453 (4%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
D G G I H I L G +
Sbjct: 11243 GGNDTITAADGDTTIIGGAGSDGIDVGAGNHVI-----LGDSGKARFSAGALVSIESIDP 11297
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
++ +++ + T V + + I + +
Sbjct: 11298 AIGGDDTVTAKDGNVTVIGGAGADRITLGKGTQVVLGDS--GSATFVDGIIATVTSTATE 11355
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV-IESVV-G 273
TI + GD + L G + I + + +G K + IES+
Sbjct: 11356 IGGNDTIAATEGDTTI---LGGAGADTIKVGAGNHVILGDSGKAVFRNGRAQRIESITPE 11412
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G D++ + +G D +G + + + A
Sbjct: 11413 VGGADIITAEDGASRIIGGAGGDTITTGAGNHVILGDSGEADFTVTVTNGVTTSVLARIA 11472
Query: 334 KQD-FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK------HF 386
+ + + F + + ++ G F+++ F
Sbjct: 11473 TTAPSIGGSDTITFGAGNNVVLGGMGGDTIRGGDKGAVILGDNGIVTFDALGLIQRALSF 11532
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
+ D + + D E ++
Sbjct: 11533 DTAIGGDDTITIGDGNNVVLGGTGRDTITIGDGNNVVLGDSGQADFEAGIIVEIASISPE 11592
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
D I + ++ G G + + LG R
Sbjct: 11593 VGDNDTIALGSGRNTVIGGAGSDSITAGLRNGVKAGTGTNVILGDTGHARITTAGLPIVV 11652
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
Y G + A+ S D+I A
Sbjct: 11653 ETTYDNVGGDDTITVGDGVAVILGGSGSDIIAA 11685
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 49/357 (13%), Positives = 86/357 (24%), Gaps = 23/357 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T++ G D + +D +I + +
Sbjct: 14280 GGDTIVTGAGRDTVFGDAGQVRFDAKGLVERAESLDTAIGGDDTIEAGAGDNLVIAGVGA 14339
Query: 269 ESVVGSSGNDVVIGNSANNVFFES------------SGNDVFDGSSGLDTFFYYAPSYLY 316
+ V GND V+G++ VF G D G D
Sbjct: 14340 DRVTTLGGNDAVLGDNGAAVFAGGMRVSLASTAPTDGGKDTLLLGDG-DNLALGGADADT 14398
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+I+ D D + ++ D + +E A ++ G
Sbjct: 14399 ITTGKGADVILGDFGSISYDAAGLLTQVLSTD-----TGLGGDDTIEAGAGDNLVLGGFG 14453
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + G + L D A I G +
Sbjct: 14454 ADTITTEIGADVILGDSGEVLYAGGRLVQARSLDAGIGGRDAIKAGEGANIVIGGMDADV 14513
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ + I L+ AD L Q + G + R D+ + G D
Sbjct: 14514 IETGSGRDVILGDSGLVRRDADG--LAQAVSTDTALGGDDAIRAGAGDNLVLGGFGSDTI 14571
Query: 497 NVF-GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G+D + + AL + + + D G D
Sbjct: 14572 DTGAGADIVLGDSGDARFELGVIASVTTLDALNG--AGDTIRAGEGDNLVFGGLGGD 14626
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/306 (12%), Positives = 73/306 (23%), Gaps = 28/306 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T++ G D + +D +I + +
Sbjct: 13878 GGDTIVTGAGRDTVFGDAGQVRFDAKGLVERAESLDTAIGGDDTIEAGAGDNLVIAGVGA 13937
Query: 269 ESVVGSSGNDVVIGNSANNVFFES------------SGNDVFDGSSGLDTFFYYAPSYLY 316
+ V GND V+G++ VF G D G D
Sbjct: 13938 DRVTTLGGNDAVLGDNGAAVFAGGMRVSLASTAPTDGGKDTLLLGDG-DNLALGGADADT 13996
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+I+ D D + ++ D + + + ++ G
Sbjct: 13997 ITTGKGADVILGDFGSISYDAAGLLAQILSTDTAL-----GGNDTITAGDGSDTILGGFG 14051
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + G+ Y L GAA + +G K
Sbjct: 14052 ADTITAGDGAKTVLGDSGQ------LDYAAGVLTLAQSLTPALGAADTIKLGNGRKLVIG 14105
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
++ + +I LV++ + + D+ +
Sbjct: 14106 GAGSDLVDGGSGDAIVIG----DAGLVRLANGLPVHAETTDVAVSGDDTVTLGAGNGVVL 14161
Query: 497 NVFGSD 502
G+D
Sbjct: 14162 GGSGAD 14167
Score = 53.3 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 54/406 (13%), Positives = 97/406 (23%), Gaps = 25/406 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINF---DKADVWRYGIGKGTILSHNALHEIGHAL 132
D + G + F + +V G G TI + I
Sbjct: 13320 GDDGRLTFDAQGRLKRAESLDPTFGDDVIEAGGGDNVVIGGAGTDTITALGGNDVILGDN 13379
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLT-SVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G +D D + + D + G A ++ D V
Sbjct: 13380 GTALFEGGVRVAFASTDPDDGGRDVIKGGDGDNVVIGSAGSDDITTGSGADIVLGDTGVV 13439
Query: 192 QKIYG-APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G + + + ++ G D + T G D S+
Sbjct: 13440 TFENGLVREVYTTDERRGAGDVIRGGDGDNIVFGGAGRDEI-TTGKGADLILGDFGEASF 13498
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ +++V G++VV+G ++ SG DV G +GL TF
Sbjct: 13499 TGGRLVRVATLNPNRGDDDTIVAGDGDNVVLGGFGSDTITAGSGADVVLGDNGLATFRTD 13558
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSD------VERLRFADQCIDSVNVKQRSIL-- 362
L + E A + + + + AD +
Sbjct: 13559 GKRILVRTTDVEIGGTDTIAAGDGDNLVIGGVDADTITTGKGADVILGDFGSVSYDAAGL 13618
Query: 363 --------EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY---LYLGSYDDL 411
+ + G D +G Y L
Sbjct: 13619 LTQVLSTDTGLGGNDTITAGDGSDTILGGFGSDTITAGDGAKTVLGDSGQLDYAAGVLTL 13678
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
GAA + +G K ++ + +I
Sbjct: 13679 IQTLTPTIGAADTIKLGNGRKLVLGGAGGDLIDGGSGDAVVIGDAG 13724
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 27/244 (11%), Positives = 56/244 (22%), Gaps = 36/244 (14%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNT 247
GA ++ TI +G GD D +
Sbjct: 10624 GADTVTVTGTAIGTLTAIHAGGGADTITVTGSQGTLALFGDTTADGSRYDSTFEKQTGRG 10683
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G +++ TI I G++G ++ G + N+ G ++ G +G DT
Sbjct: 10684 YGFRDEGTLDRDNTIVSLNDIIDASGATGLVIIDGGAGNDTITGGKGRNIIAGGTGNDTI 10743
Query: 308 FYYAPSYLYK--------------------IYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ I + A + + + +
Sbjct: 10744 VGGPAADTILGDSSLNLDDVRRIVTIADPFIDQPRAAGTDTIDAKGGDNVIVGDHAQIYQ 10803
Query: 348 DQCIDSVNVK--------QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
D + S + + G ++ G +
Sbjct: 10804 DGSATAGIALEGTHVVSRIVSTFTGIGGGDLITATDGNNIVIGGFGADTITAGAGNHVIL 10863
Query: 400 DSYL 403
Sbjct: 10864 GDNG 10867
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 49/361 (13%), Positives = 97/361 (26%), Gaps = 37/361 (10%)
Query: 72 ETSIHSDIKFISSNN-GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ +D+ F + R +++ F D + G G ++ +
Sbjct: 13136 QADTDADLVFGDDGQITFDAQGRVKRAESLDVGFGDDDEIKVGGGDNLVIGGAGSDVVT- 13194
Query: 131 ALGL------MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
ALG H + + D+ + + + + T
Sbjct: 13195 ALGGNDIVLGDHGYAVFEAGVRVEFASTDTTDAGNDRIEAGDGENIVLGGSGSDTVVTGT 13254
Query: 185 VSDIVA-----VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
DIV V+ G + + + G D +D
Sbjct: 13255 GGDIVLGDNGLVRFERGIRAVVQSSRDGGTRDVLRSGAGADVVLGGLGADTIDAGRDDAD 13314
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ + + + + ES+ + G+DV+ +NV +G D
Sbjct: 13315 ADIVLGDDGRLTF-------DAQGRLKRAESLDPTFGDDVIEAGGGDNVVIGGAGTDTIT 13367
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G D FE + V A+ D DV
Sbjct: 13368 ALGGNDVI-----LGDNGTALFEGGVRVAFASTDPDDGGRDV-----------IKGGDGD 13411
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+++ +A +D+ G D+ F R++ G+ D +R G +
Sbjct: 13412 NVVIGSAGSDDITTGSGADIVLGDTGVVTFENGLVREVYTTDER-RGAGDVIRGGDGDNI 13470
Query: 420 G 420
Sbjct: 13471 V 13471
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 51/454 (11%), Positives = 99/454 (21%), Gaps = 30/454 (6%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+T+I D + V + + + G + I
Sbjct: 11533 DTAIGGDDTITIGDGNNVVLGGTGRDTITIGDGNNVVLGDSGQADFEAGIIVEIASISPE 11592
Query: 132 LGLMHPGSYNGGYPVY--GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
+G + G G +D V + + D T +
Sbjct: 11593 VGDNDTIALGSGRNTVIGGAGSDSITAGLRNGVKAGTGTNVILGDTGHARITTAGL---- 11648
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+ + + I G D++ +
Sbjct: 11649 -------PIVVETTYDNVGGDDTITVGDGVAVILGGSGSDIIAAGNGRSTVLGDNGQATF 11701
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG------ 303
+ + T A + + G VVIG + SG DV G +G
Sbjct: 11702 DAQGRVLQAATTAATAGARDEITLGDGGSVVIGGVGADKIQTGSGADVILGDNGSAVFLN 11761
Query: 304 -----LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
++T + + ++ + ++ + D K
Sbjct: 11762 GVLVSIETMESTFGGGDAIVAGEGDNVVFGGVGADDITTGAGLDIILGDDGAATFAQGKL 11821
Query: 359 RSILEYT---ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL---R 412
+ A + + G +V G D+ F + D +
Sbjct: 11822 VRVSTKNESVAGDDIIRAGDGDNVVLGGSGSDTITTGIGADLVFGDNGAVDFVDGVLREA 11881
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
G G ++ D F D + G S
Sbjct: 11882 LSERVGGGGRDTIVTGAGADLVLGGLGGDTIDAGKDDTDADIVFGDNGHITFDGLGRVSL 11941
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ D L + + GSD
Sbjct: 11942 TEIVDPALGGDDEILAGAGANLILGGAGSDTITT 11975
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 58/252 (23%), Gaps = 23/252 (9%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
D + +NV G D +G DT F A + D D
Sbjct: 13861 ADEIRAGEGDNVVLGGVGGDTIVTGAGRDTVFGDAGQVRFDAKGLVERAESLDTAIGGDD 13920
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM------------K 384
+ + + + ++ G VF
Sbjct: 13921 T------IEAGAGDNLVIAGVGADRVTTLGGNDAVLGDNGAAVFAGGMRVSLASTAPTDG 13974
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
L +G ++ L D + G+D I++ G
Sbjct: 13975 GKDTLLLGDGDNL----ALGGADADTITTGKGADVILGDFGSISY-DAAGLLAQILSTDT 14029
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ ++ + L G D + + Y L G
Sbjct: 14030 ALGGNDTITAGDGSDTILGGFGADTITAGDGAKTVLGDSGQLDYAAGVLTLAQSLTPALG 14089
Query: 505 AAARHYITHGVK 516
AA + +G K
Sbjct: 14090 AADTIKLGNGRK 14101
Score = 44.4 bits (103), Expect = 0.058, Method: Composition-based stats.
Identities = 57/499 (11%), Positives = 114/499 (22%), Gaps = 55/499 (11%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+T++ + + + + + + K + G +
Sbjct: 14027 TDTALGGNDTITAGDGSDTILGGFGADTITAGDGAKTVLGDSGQLDYAAGVLTLAQSLTP 14086
Query: 131 ALG------LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
ALG L + G + + D+ + + + +
Sbjct: 14087 ALGAADTIKLGNGRKLVIGGAGSDLVDGGSGDAIVIGDAGLVRLANGLPVHAETTDVAVS 14146
Query: 185 VSDIVAVQKIYGAPKGSLGN---NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
D V + G G G + + + + T
Sbjct: 14147 GDDTVTLGAGNGVVLGGSGADRLTVGTGQSVVLGDNGTVDFDEQARPVEITSTAPEVGSR 14206
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN---------------------DVV 280
+ + + S + G TI+ + + ++G +G D +
Sbjct: 14207 DVIVVGDGGSVVIGGVGADTISTGSGADVILGDNGAVTLSAFIPVFVRTTNAALGDADEI 14266
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+NV G D +G DT F A + D D
Sbjct: 14267 RAGEGDNVVLGGVGGDTIVTGAGRDTVFGDAGQVRFDAKGLVERAESLDTAIGGDDT--- 14323
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM------------KHFYE 388
+ + + + ++ G VF
Sbjct: 14324 ---IEAGAGDNLVIAGVGADRVTTLGGNDAVLGDNGAAVFAGGMRVSLASTAPTDGGKDT 14380
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
L +G ++ L D + G+D I++ G +
Sbjct: 14381 LLLGDGDNL----ALGGADADTITTGKGADVILGDFGSISY-DAAGLLTQVLSTDTGLGG 14435
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ + D L G D + + LY + L D G R
Sbjct: 14436 DDTIEAGAGDNLVLGGFGADTITTEIGADVILGDSGEVLY--AGGRLVQARSLDAGIGGR 14493
Query: 509 HYITHGVKEGRNPDAFKAL 527
I G A
Sbjct: 14494 DAIKAGEGANIVIGGMDAD 14512
Score = 44.4 bits (103), Expect = 0.060, Method: Composition-based stats.
Identities = 43/463 (9%), Positives = 94/463 (20%), Gaps = 67/463 (14%)
Query: 106 KADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSY 165
D G G + I G + Y N S T+
Sbjct: 14724 GDDRIEAGDGNDFVAGGTGADVILGGGGHDVLFGDHMLYDRALPVNQRAV-SIFTAATDG 14782
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI---EVQQKDSPFIQTI 222
A + D + G + G+N+ + I
Sbjct: 14783 GGNDSIEGGAGDDFLYGQQGDDW--LSGGAGDDDITGGHNVLGGADGDDLINGGVGADVI 14840
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESW-----------SSIGGYEKNMTIAQHTVIESV 271
G ++ + N ++ I N IA + +
Sbjct: 14841 LGDNGVITRNVLVDDVKSVTWQRNPGAFADTVMRDMLRFDLIDFVGGNDAIAGGAGDDRI 14900
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD-------TFFYYAPSYLYKIYRFENA 324
G G+D++ G ++ G D DG + +D + +
Sbjct: 14901 FGQMGDDLIYGEEGSDEIVGGLGRDRIDGGTDVDYLLGDEGRIVRAFTGDGAAVLNSDGT 14960
Query: 325 II---------------VYDANEHKQDFLSDVERLRFADQCIDSVNVKQ----------- 358
DA E+L AD +
Sbjct: 14961 WHRDVVLEEIGTVTAAIAIDAQSAAARTADLAEKLAQADLVLAVGARDGSGTRLTTAGGA 15020
Query: 359 --------------RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL- 403
I+ + L G D +++ +
Sbjct: 15021 WATSALTVSLARAEDDIIAGGDGNDVLFGQRGNDKLIGDAGDDLIYGDRASNLSETASDR 15080
Query: 404 --YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
+ + + + + I + + +D
Sbjct: 15081 PTIVNAIRLIGAAAETGLVLPLGGEVVVPALNLVPGVFGAGAPRIEVYPSMAGVVSDIAG 15140
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ + + + + + +D+ + +
Sbjct: 15141 SDPIRRSDGATLTVTASLVPSLYGTNNVLAGNDVIDGGAGNDT 15183
Score = 44.4 bits (103), Expect = 0.065, Method: Composition-based stats.
Identities = 53/369 (14%), Positives = 86/369 (23%), Gaps = 35/369 (9%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV-IE 269
S TI G D +D+ G + N ++ + G +I +
Sbjct: 11018 DTITASDGDTTIIGGAGADTIDV--GAGNHVILGDNGKAVFTAGALVSIESIDPEIGDND 11075
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------FYYAPSYLYKIY 319
+V GN VIG + + G V G SG TF A I
Sbjct: 11076 AVTARDGNATVIGGAGADRITLGKGTQVVLGDSGAATFANGQIATITAIATAIGGGDTIT 11135
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE----YTASYEDLIQVI 375
+ + + + D +E + +
Sbjct: 11136 ASDGDTTIIGGAGADTIDVGAGNHVILGDNGRAVFTAGALVSIESIDPGIGGNDVITAKD 11195
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G L +G + N D A A G
Sbjct: 11196 GNVTALGGAGADRITLGKGTQVVLGDSG----SATFANGKIQDITAIATEIG--GNDTIT 11249
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF-----GCEEGRFVTFDSYLYLG 490
D + A + + + L GK FS + D+
Sbjct: 11250 AADGDTTIIGGAGSDGIDVGAGNHVILGDSGKARFSAGALVSIESIDPAIGGDDTVTAKD 11309
Query: 491 SYDDLRNVFGSDRGA-------AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
+ G+DR + +G I ++ + D
Sbjct: 11310 GNVTVIGGAGADRITLGKGTQVVLGDSGSATFVDGIIATVTSTATEIGGNDTIAATEGDT 11369
Query: 544 PDLVQAGKD 552
L AG D
Sbjct: 11370 TILGGAGAD 11378
Score = 42.9 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 61/559 (10%), Positives = 123/559 (22%), Gaps = 85/559 (15%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWR-YGIGKGTILSHNALHEIGHALG 133
+ + + F++ +A R G G+ TI++ + LG
Sbjct: 11849 GSGSDTITTGIGADLVFGDNGAVDFVDGVLREALSERVGGGGRDTIVTGAGADLVLGGLG 11908
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ V D + +F ++ A
Sbjct: 11909 GDTIDAGKDDTDADIVFGDNGHITFDGLGRVSLTEIVDPALGGDDEI----LAGAGANLI 11964
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+ GA + I ++ +GG L + + G + +
Sbjct: 11965 LGGAGS----DTITTGAGADIVLGDNGSVIFAGGIRLEAKSDLSGGARDTIVTGAGADLV 12020
Query: 254 GGYEKNMTIAQH------------------------------------------------ 265
G TI
Sbjct: 12021 IGGLGGDTIDAGKLDADDDIVIGDSGHITFDELGRVIRAEATDPTGGGDDSIDVGGGNNI 12080
Query: 266 ----TVIESVVGSSGNDVVIGNSANNVFFE-----------SSGNDVFDGSSGLDTFFYY 310
+++ +G DVV+G++ F D +G D
Sbjct: 12081 VIGGAGSDTITTGAGADVVLGDNGFVTFTGGIRLEAKSDPAGGARDTIRTGAGAD-LVIG 12139
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF-------ADQCIDSVNVKQRSILE 363
++A ++ ++ R++ + +I+
Sbjct: 12140 GLGGDTIDAGKDDADDDIVFGDNGHVTFDELGRVKLAQSLDPTSGGDDSIEAGSGNNIVL 12199
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA-A 422
A + + G DV F G + S G+ D + G+D
Sbjct: 12200 GGAGSDTITTGAGADVVLGDNGSVTFAG--GIRLELTSGRDGGAADTIITGAGADLVLGG 12257
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
K + D + + +G D + G + V
Sbjct: 12258 LGADTIDAGKNDADADIVFGDNGHVTFDGPGRVKRAESLDFGLGDDDSIDVGGGDNIVVG 12317
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP--DAFKALEYIASHEDLINAF 540
+ + V G D A E + ++ +I
Sbjct: 12318 GTGADRITALGGNDVVLGDDGRATFETSGRVQRAESFDLGFGGNDTIDVGTGDNVVIAGA 12377
Query: 541 ADAPDLVQAGKDHFSNFGY 559
+G D G
Sbjct: 12378 GSDVVTALSGNDAVIGDGG 12396
>gi|170743790|ref|YP_001772445.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
gi|168198064|gb|ACA20011.1| glycosyl transferase group 1 [Methylobacterium sp. 4-46]
Length = 1271
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 57/297 (19%), Positives = 84/297 (28%), Gaps = 85/297 (28%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-----------------PDAF 440
FD Y Y DL ++ G HY+ HG +EGR P F
Sbjct: 3 DFDENFYYTLYPDLHHLTGRGE--LLEHYLRHGRREGRQSSVEGYLADLSAEHGPLPKDF 60
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
+ Y + DL + F + H+ G EE R D ++ + V
Sbjct: 61 RPSLYRDLNPDLASRFTEDWQF----IAHYLRHGREEKRPYALDIASDADAFARV-AVRD 115
Query: 501 SDRGAA---ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
D AA A HG+ G F +++ + D P + G F
Sbjct: 116 GDPEAADAFAAFLRQHGLVPGSWLLRFDLAQFVQLNAD---WIGPPPRVRAEGLRLFVEQ 172
Query: 558 GYEEGRSIT----FNPDLYLTSYD--DLWNV---------------FGSDRSA------- 589
G I F+P Y Y DL + F + SA
Sbjct: 173 GIARLAPIHAEAMFDPAFYRAVYPVEDLPDDASLYRHWLCTGIERGFAPNESAHLAALIG 232
Query: 590 ---------------------------AAQHYITHGMKEGRALGISGMQFKSVMNLS 619
+H++ G GR +SG + + L
Sbjct: 233 ETVFPRCFDLAGYRAALPRGAALPRTQVLEHWLDFGFPAGRLDVVSGPDEAAFLGLV 289
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 43/132 (32%), Gaps = 27/132 (20%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--------------- 566
F Y + DL + +H+ G EGR +
Sbjct: 2 SDFDENFYYTLYPDLHHLTG-----RGELLEHYLRHGRREGRQSSVEGYLADLSAEHGPL 56
Query: 567 ---FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI---SGMQFKSVMNLSE 620
F P LY DL + F D A HY+ HG +E R + S + + + +
Sbjct: 57 PKDFRPSLYRDLNPDLASRFTEDWQFIA-HYLRHGREEKRPYALDIASDADAFARVAVRD 115
Query: 621 KSRDKADLSLSF 632
+ AD +F
Sbjct: 116 GDPEAADAFAAF 127
>gi|149202525|ref|ZP_01879497.1| 5'-nucleotidase [Roseovarius sp. TM1035]
gi|149143807|gb|EDM31841.1| 5'-nucleotidase [Roseovarius sp. TM1035]
Length = 551
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/213 (15%), Positives = 56/213 (26%), Gaps = 25/213 (11%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G + P + + SGG+D L GG N + SI N I
Sbjct: 247 GGPDTGGPDEPNPPPPDRFLEGSGGNDTL----RGGEGNDTIAGGDGDDSIEAGGGNDNI 302
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + V +GND V G N+ F ++G+DV G D +
Sbjct: 303 SASDGNDFVDAGAGNDSVGGGLGNDTIFGTTGDDVMGAGFGDD--VVSGGLGNDVVAGGA 360
Query: 323 NAIIVYDA-------NEHKQDFLSDV------------ERLRFADQCIDSVNVKQRSILE 363
+ D +S + + + ++
Sbjct: 361 GNDTLEGGDGNDSMSGSFGNDLISGGDGADDIGGGTGRDTIDAGAGNDRVGGGEGDDSIQ 420
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
A + L D + G D
Sbjct: 421 GGAGNDFLAGGGRNDTIDGGSGADTINGGAGND 453
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/253 (15%), Positives = 77/253 (30%), Gaps = 17/253 (6%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
G + +DS + + D V + I+G +
Sbjct: 278 GEGNDTIAGGDGDDSIEAGGGNDNISASDGNDFVDAGAGNDSVGGGLGNDTIFG----TT 333
Query: 203 GNNIYK---IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIG 254
G+++ + + G+D L + ++ G N + + IG
Sbjct: 334 GDDVMGAGFGDDVVSGGLGNDVVAGGAGNDTLEGGDGNDSMSGSFGNDLISGGDGADDIG 393
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G TI + V G G+D + G + N+ ND DG SG DT +
Sbjct: 394 GGTGRDTIDAGAGNDRVGGGEGDDSIQGGAGNDFLAGGGRNDTIDGGSGADTI--NGGAG 451
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC---IDSVNVKQRSILEYTASYEDL 371
++ A + ++ + + D+ I + + + +I A
Sbjct: 452 NDRMTGGAGADQFVFSAFNEGETDVITDFQDGIDRLFIRIINPDTGETNITNGNAGLSGF 511
Query: 372 IQVIGQDVFESMK 384
+ +G +
Sbjct: 512 VAALGILDTAAGA 524
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 65/272 (23%), Gaps = 30/272 (11%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
NGG G D S + + I A G
Sbjct: 244 PGNGGPDTGGPDEPNPPPPDRFLEGSGGNDTLRGGEGNDTIAGGDGDDSIEA----GGGN 299
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
++ ++ G+D + G + + + G
Sbjct: 300 DNISASD---GNDFVDAGAGNDSVGGGLGNDTI----FGTTGDDVMGAGFGDDVVSGGLG 352
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N +A +++ G GND + G+ N++ G D G +G DT
Sbjct: 353 NDVVAGGAGNDTLEGGDGNDSMSGSFGNDLISGGDGADDIGGGTGRDTI----------- 401
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A D ++ + ++ + + + G D
Sbjct: 402 --DAGAGNDRVGGGEGDD------SIQGGAGNDFLAGGGRNDTIDGGSGADTINGGAGND 453
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+F S + D D
Sbjct: 454 RMTGGAGADQFVFSAFNEGETDVITDFQDGID 485
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 30/232 (12%), Positives = 54/232 (23%), Gaps = 27/232 (11%)
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D L E +E +++ G D ++ G
Sbjct: 268 GSGGNDTLRGGE------GNDTIAGGDGDDSIEAGGGNDNISASDGNDFVDAGAGNDSVG 321
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G D F + D + FG D + G LE ++
Sbjct: 322 GGLGNDTIFGTTGD----DVMGAGFGDDVVS-----GGLGNDVVAGGAGNDTLEGGDGND 372
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
+ +F + G D + + G D G+ A
Sbjct: 373 SMSGSFGNDLISGGDGADDIGGGTGRDTIDAGAGNDRVGGGEGDDSIQGGAGNDFLA--- 429
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
++ + + + + AG D F + EG
Sbjct: 430 ---------GGGRNDTIDGGSGADTINGGAGNDRMTGGAGADQFVFSAFNEG 472
Score = 37.5 bits (85), Expect = 8.0, Method: Composition-based stats.
Identities = 32/237 (13%), Positives = 50/237 (21%), Gaps = 62/237 (26%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S + + D G + + + LG
Sbjct: 294 EAGGGNDNISASDGNDFVDAGAGNDSVGGGLGNDTIFGTTGDDVMGAGFGDDVVSGGLGN 353
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + G D + MS D +
Sbjct: 354 DVVAGGAGNDTLEGGDGN--------DSMSGSFGNDLISGGDGA---------------- 389
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
TI G+D + E SI
Sbjct: 390 ----------------DDIGGGTGRDTIDAGAGNDRV-------------GGGEGDDSIQ 420
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G N +A +++ G SG + +GND G +G D F + A
Sbjct: 421 GGAGNDFLAGGGRNDTIDGGSG---------ADTINGGAGNDRMTGGAGADQFVFSA 468
>gi|254441957|ref|ZP_05055446.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
gi|198250610|gb|EDY74929.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
Length = 676
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 57/211 (27%), Gaps = 20/211 (9%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G+ N I + G D +D+ G N+ID + G
Sbjct: 72 AGNGDNCIDGGDGANNTITVGGGNNYLLGGDGVDVITAGNGNNFIDAGEGLNAVTAGSGD 131
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I + + V G + V N +G+DV + G DT + K+
Sbjct: 132 NY-IVVGDLNDVVTAMGGENNVQTGDGTNAVTTGTGDDVVETGIGNDTVTVGTGKNIVKV 190
Query: 319 YRFENAII--------VYDANEHKQDFLSDVERLRFADQCIDSVN-----------VKQR 359
+ + + + D + +S + I V
Sbjct: 191 FGGADVLTAGADHDRLIVDYAAYDTTVVSALTGFATYGGTIGDVTLTNFEEFHVTTGSAD 250
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+E + L G D S +
Sbjct: 251 DTIETFDGADVLDGGAGADTLTSGEGNDVIY 281
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 41/263 (15%), Positives = 73/263 (27%), Gaps = 12/263 (4%)
Query: 166 FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS 225
++ S A V+ IVA +G S G I
Sbjct: 5 GADTITVGTGSNKIAAGDGVNTIVATGVGFGNNIISGG----TGADTISVGHGNNHISGG 60
Query: 226 GGDDL-LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G D LD + G N ID + ++I N + ++ + +GN+ +
Sbjct: 61 EGVDTGLDTIVAGNGDNCIDGGDGANNTITVGGGNNYLLGGDGVDVITAGNGNNFIDAGE 120
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N SG++ D + NA+ + + + +
Sbjct: 121 GLNAVTAGSGDNYIVVGDLNDVVTAMGGENNVQTGDGTNAVT-TGTGDDVVETGIGNDTV 179
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLI---QVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+L A ++ LI V ++ F +G + G +
Sbjct: 180 TVGTGKNIVKVFGGADVLTAGADHDRLIVDYAAYDTTVVSALTGFATYGGTIGDVTLTNF 239
Query: 402 YLY---LGSYDDLRNVFGSDRGA 421
+ GS DD F
Sbjct: 240 EEFHVTTGSADDTIETFDGADVL 262
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/229 (10%), Positives = 55/229 (24%), Gaps = 10/229 (4%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES--VVGSSGNDVVIGNSANNVFFES- 292
G + I + T S G N +A + + G +G D + NN
Sbjct: 2 SGDGADTITVGTGSNKIAAGDGVNTIVATGVGFGNNIISGGTGADTISVGHGNNHISGGE 61
Query: 293 ---SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G D +G + + N ++ + + +
Sbjct: 62 GVDTGLDTIVAGNGDNCIDGGDGANNTITVGGGNNYLLGGDGVDVITAGNGNNFIDAGEG 121
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ + + + + G++ ++ G D+ D
Sbjct: 122 LNAVTAGSGDNYIVVGDLNDVVTAMGGENNVQTGDGTNAVTTGTGDDVVETGIG----ND 177
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+ G + + Y + + FA
Sbjct: 178 TVTVGTGKNIVKVFGGADVLTAGADHDRLIVDYAAYDTTVVSALTGFAT 226
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 27/266 (10%), Positives = 63/266 (23%), Gaps = 33/266 (12%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
+ +++ G+ I+ + G + G+
Sbjct: 19 AAGDGVNTIVATGVGFGNNIISGGTGADTISVGHGNNHISGGEGVDTGLDTIVA--GNGD 76
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI---- 188
+ G G N+Y V++ + + T D
Sbjct: 77 NCIDGGDGANNTITVGGGNNYLLGGDGVDVITAGNGNNFIDAGEGLNAVTAGSGDNYIVV 136
Query: 189 ----VAVQKIYGAPKGSLGN-----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL---- 235
V + G G+ + + T+ G +++ +
Sbjct: 137 GDLNDVVTAMGGENNVQTGDGTNAVTTGTGDDVVETGIGNDTVTVGTGKNIVKVFGGADV 196
Query: 236 -------------IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+ +++ GG ++T+ V S +D +
Sbjct: 197 LTAGADHDRLIVDYAAYDTTVVSALTGFATYGGTIGDVTLTNFEEF-HVTTGSADDTIET 255
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFF 308
+V +G D G D +
Sbjct: 256 FDGADVLDGGAGADTLTSGEGNDVIY 281
Score = 47.1 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 74/291 (25%), Gaps = 41/291 (14%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYA-PSYLYKIYRFENAIIVYDA-------NE 332
+ + +G++ G++T I A +
Sbjct: 1 MSGDGADTITVGTGSNKIAAGDGVNTIVATGVGFGNNIISGGTGADTISVGHGNNHISGG 60
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSIL--------EYTASYEDLIQVIGQDVFESMK 384
D D D CID + +I + + G + ++ +
Sbjct: 61 EGVDTGLDTIVAGNGDNCIDGGDGANNTITVGGGNNYLLGGDGVDVITAGNGNNFIDAGE 120
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G D+Y+ +G +D+ G G + D A+
Sbjct: 121 GLNAVTAGSG-----DNYIVVGDLNDVVTAMG-------------GENNVQTGDGTNAVT 162
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
+ + + V GK+ FG + D + Y + +
Sbjct: 163 TGTGDDVVETGIGNDTVTVGTGKNIVKVFGGADVLTAGADHDRLIVDY----AAYDTTVV 218
Query: 505 AAARHYITHGVKEGR-NPDAFKALEYIASHED--LINAFADAPDLVQAGKD 552
+A + T+G G F+ D + AG D
Sbjct: 219 SALTGFATYGGTIGDVTLTNFEEFHVTTGSADDTIETFDGADVLDGGAGAD 269
>gi|119482191|ref|XP_001261124.1| matrix metalloproteinase [Neosartorya fischeri NRRL 181]
gi|119409278|gb|EAW19227.1| matrix metalloproteinase [Neosartorya fischeri NRRL 181]
Length = 616
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 53/251 (21%), Positives = 88/251 (35%), Gaps = 62/251 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE--TSIHS 77
+ W + + + D + DI+E A+ AL +WS V LTF E ++ +
Sbjct: 96 ESRWQHTNLTFAFDNF-----TADISE--QQARREILDALADWSNVTPLTFAELPSTQPA 148
Query: 78 DIKFISSNNGYV-------------------CTPRYDSRYFMEINFDKADVWRYGIGKGT 118
D++F+ ++ + P +I+FD+ ++W T
Sbjct: 149 DLRFMWASGNHANEPVEKDFDGLGGVLAHAFFPPPSGGTLAGQIHFDEDELWTA-----T 203
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
L + ALHEIGHALGL H SVMS F+ ++ +
Sbjct: 204 GLRNAALHEIGHALGLNHSPDN-------------------LSVMSAFVNTLAIKPLT-- 242
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
+ DIV VQ +YG +G + P + D D G
Sbjct: 243 ------MDDIVGVQSLYGQRP--VGPFTSVFDSGGHGMPSFDLMSDFDRAFAFDFDHSGA 294
Query: 239 VKNYIDLNTES 249
+ + +
Sbjct: 295 MDHLVMYRPGQ 305
>gi|329849044|ref|ZP_08264072.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844107|gb|EGF93676.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1276
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 62/496 (12%), Positives = 127/496 (25%), Gaps = 12/496 (2%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ IS +G ++ N + D G ++ + LG
Sbjct: 17 GPDEFNMISGEDGNDSLTGGAVGDYIWGN-EGNDTLTGAGGDDLLMGIAGDDRLTGGLGN 75
Query: 135 MHPGSYNGGYPVYGV-DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ DS ++ + S D +T S +++
Sbjct: 76 DSLWDGGADDAGNDTLEGGEGGDSLVSYGGRDVIDGGSDSDNLHLDRSTSTFSFHLSMAD 135
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+ A L + ++ + G D G + + + +
Sbjct: 136 LTAAGDHVLADGTLVRNIEYFSAALGYGNDTLTGGVSGDNFRGGSGADSLS-GLLGYDRL 194
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF------ 307
G + N T+ +++ G +GND +IG+S ++ G+D G +G D
Sbjct: 195 EGGDGNDTVDGGEGYDNIFGGAGNDSLIGDSGHDELQGDDGHDRLKGDAGDDRLNAGAGD 254
Query: 308 -FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ L + + + + D L + D+ + A
Sbjct: 255 DLVEGGTGLDVLTGGDGNDTLNGGAGNDVMSGGDGNDLLEDLEGEDAQWGNTGITFDGGA 314
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + + + G D + + D+ N G + Y
Sbjct: 315 GNDTMTASAVAETLQGGYGNDVINAGGGNDFLYGDQGEADAGIDVMNGDGGNDV--VYSY 372
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+G + + L +++ L A V + E V
Sbjct: 373 GGADTIDGGADNDYVTLFRRGANQGLTVDAVLAATAGGVVLADGTVLQNVENLAVFSGGG 432
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
+ L + F GA G + +L D
Sbjct: 433 NDTYTGGGLNDEFWGGGGADLATSGADGYDVIYGEAGNDTVAGGGGRNELHGGEGDDMVT 492
Query: 547 VQAGKDHFSNFGYEEG 562
AG G +
Sbjct: 493 GGAGASFLYGDGGNDS 508
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 64/414 (15%), Positives = 121/414 (29%), Gaps = 29/414 (7%)
Query: 73 TSIHSDIKFISSNNGYVCTP----RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ F+ + G D + ++ AD G +
Sbjct: 337 INAGGGNDFLYGDQGEADAGIDVMNGDGGNDVVYSYGGADTIDGGADNDYVTLFRRGANQ 396
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV----MSYFMPQDSMMDASFGYCATPM 184
G + + + G G + + S + G
Sbjct: 397 GLTVDAVLAATAGGVVLADGTVLQNVENLAVFSGGGNDTYTGGGLNDEFWGGGGADLATS 456
Query: 185 VSDIVAVQKIYGAPKGSLGNNI------YKIEVQQKDSPFIQTIYDSGGDDLLDL----- 233
+D V G + + +Y GG+D L
Sbjct: 457 GADGYDVIYGEAGNDTVAGGGGRNELHGGEGDDMVTGGAGASFLYGDGGNDSLTGGTGQN 516
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
L G N + L+ W ++ G N T+ V+++++G GND++ G + +++ +
Sbjct: 517 ILWAGDGNDLLLSVGGWGTMLGEAGNDTLTGSDVVDTMIGGQGNDLLSGGAGDDILNGDA 576
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK-QDFLSDVERLRFADQCID 352
GND+ +G +G D +A + + + V L DV ++ A
Sbjct: 577 GNDITNGGAGNDLI--HAYEGVDTVDGGDGLDTVNMGAPDGANGVLVDVTQISTAAGVTF 634
Query: 353 SVNVKQRS----ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY---L 405
S + R+ +L + + LI +G D F + +G D +
Sbjct: 635 SNGMVLRNVEVLLLSASGGNDTLIGGVGNDTFNAGGGNDWVEGGDGNDSLTGGDYFSEWS 694
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
D + G D G + A E S+ D+ A
Sbjct: 695 SGNDTMAGNSGDDILNGFDGDDLIQGGIGADTLQGGAGEDTVSYADIDVAVTVD 748
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/487 (11%), Positives = 118/487 (24%), Gaps = 19/487 (3%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
S T D D G S N +
Sbjct: 649 SASGGNDTLIGGVGNDTFNAGGGNDWVEGGDGNDSLTGGDYFSEWSSGNDTMAGNSGDDI 708
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
++ + + + + +V + +D + + ++ +I
Sbjct: 709 LNGFDGDDLIQGGIGADTLQGGAGEDTVSYADIDVAVTVDLAVEVAQAMGGAGNDSLSQI 768
Query: 195 YGAPKGSLGN--NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
S G+ + + T+ G+D G + +L+ + S
Sbjct: 769 EHVVGTSAGDWLGGTTGDNRLDGGLGNDTLMGRAGNDTY-FVQAAGDRVSENLSEGTDSV 827
Query: 253 IGGYEKNMT------IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ N++ T G+ +V+IGN NN ++GND G G DT
Sbjct: 828 VASLNWNLSANVENLTFTGTGNFVGNGNGMGNVLIGNIGNNWLEGAAGNDTLSGGLGNDT 887
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYT 365
F + E + ++VE L A + + +
Sbjct: 888 FVID---AEDVVTELEGQGADWVLALRSYVLGTNVENLALAGSGHFTATGNVAANRMSGN 944
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
L + G D + + D+ ++ +
Sbjct: 945 GGNNLLDGLGGNDTLIGGLGNDSYVVDSSGDVVTENASEGTDSIVASLNWNLSANIENLT 1004
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF-SNFGCEEGRFVTFD 484
+ G L + + L A + +G D F +
Sbjct: 1005 FSGAANLVGHGNGLGNVLNGNSGNNWLEGAAGNDTLSGGLGNDTFVIDAEDVVTELEGQG 1064
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
+ L S + + + G G A + + + L +
Sbjct: 1065 ADWVLASRSYVLGANVENLA-----FGGAGNFTGNGNAANNIISGNSGNNWLDGGVGNDT 1119
Query: 545 DLVQAGK 551
G
Sbjct: 1120 LTGGLGN 1126
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 73/495 (14%), Positives = 125/495 (25%), Gaps = 33/495 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
I++ D D G G + +I A G+
Sbjct: 574 GDAGNDITNGGAGNDLIHAYEGVDTVDGGDGLDTVNMGAPDGANGVLVDVTQISTAAGVT 633
Query: 136 HPGSYNGGYP-VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
V + ND+ + V + D G ++ +
Sbjct: 634 FSNGMVLRNVEVLLLSASGGNDTLIGGVGNDTFNAGGGNDWVEGGDGNDSLTGGDYFSEW 693
Query: 195 YGAPKGSLGN------NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
GN N + + + T+ G+D + I V +DL E
Sbjct: 694 SSGNDTMAGNSGDDILNGFDGDDLIQGGIGADTLQGGAGEDTVSYADI-DVAVTVDLAVE 752
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++GG + + IE VVG+S D + G + +N GND G +G DT+F
Sbjct: 753 VAQAMGGAGNDSL----SQIEHVVGTSAGDWLGGTTGDNRLDGGLGNDTLMGRAGNDTYF 808
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
A ++ + + ++VE L F N
Sbjct: 809 VQA--AGDRVSENLSEGTDSVVASLNWNLSANVENLTFTGTGNFVGNGNGM--------G 858
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
LI IG + E G D + G+D A R Y+
Sbjct: 859 NVLIGNIGNNWLEGAAGNDTLSGGLGNDT---FVIDAEDVVTELEGQGADWVLALRSYVL 915
Query: 429 HGVKEGRNPDAFK--ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
E + + + G D + V
Sbjct: 916 GTNVENLALAGSGHFTATGNVAANRMSGNGGNNLLDGLGGNDTLIGGLGNDSYVVDSSGD 975
Query: 487 LYLGSYDDLRNVFGSDRGAAAR------HYITHGVKEGRNPDAFKALEYIASHEDLINAF 540
+ + + + + + G L + + L A
Sbjct: 976 VVTENASEGTDSIVASLNWNLSANIENLTFSGAANLVGHGNGLGNVLNGNSGNNWLEGAA 1035
Query: 541 ADAPDLVQAGKDHFS 555
+ G D F
Sbjct: 1036 GNDTLSGGLGNDTFV 1050
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 53/378 (14%), Positives = 97/378 (25%), Gaps = 41/378 (10%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
E + F+ + NG + D G+G T +
Sbjct: 838 NVENLTFTGTGNFVGNGNGMGNVLIGNIGNNWLEGAAGNDTLSGGLGNDTFV-------- 889
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
+ + + ++ ++ SY + + A G ++
Sbjct: 890 -------------IDAEDVVTELEGQGADWVLALRSYVLGTNVENLALAGSGHFTATGNV 936
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
A + + G +L + + + + DS GD + + G LN
Sbjct: 937 AANR-MSGNGGNNLLDGLGGNDTLIGGLGNDSYVVDSSGDVVTENASEGTDSIVASLNWN 995
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++I G+ +V+ GNS NN ++GND G G DTF
Sbjct: 996 LSANIENLT-----FSGAANLVGHGNGLGNVLNGNSGNNWLEGAAGNDTLSGGLGNDTFV 1050
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ E + ++VE L F A+
Sbjct: 1051 ID---AEDVVTELEGQGADWVLASRSYVLGANVENLAF--------GGAGNFTGNGNAAN 1099
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ G + + G D + G+D A R +
Sbjct: 1100 NIISGNSGNNWLDGGVGNDTLTGGLGND---VLVVDGDDVVVEAANGGNDWVLANRSFNL 1156
Query: 429 HGVKEGRNPDAFKALEYI 446
G E
Sbjct: 1157 GGHIEHLAFSGTGNFTGN 1174
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/319 (11%), Positives = 90/319 (28%), Gaps = 29/319 (9%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + + ++ I G + N ++ V + + G+ GND + G +++ +G+D
Sbjct: 8 GTPGDDTYVGPDEFNMISGEDGNDSLTGGAVGDYIWGNEGNDTLTGAGGDDLLMGIAGDD 67
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G G D+ + ++A D L + + + +
Sbjct: 68 RLTGGLGNDSLWDGGA---------DDAGNDTLEGGEGGDSL-----VSYGGRDVIDGGS 113
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
++ ++ + D+ + H G F + L G+ V G
Sbjct: 114 DSDNLHLDRSTSTFSFHLSMADLTAAGDHVLADGTLVRNIEYFSAALGYGNDTLTGGVSG 173
Query: 417 SDRGAAARH---YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ + G D ++ ++++ + + G D
Sbjct: 174 DNFRGGSGADSLSGLLGYDRLEGGDGNDTVDGGEGYDNIFGGAGNDSLIGDSGHDELQGD 233
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
+ D G+ G+ D L A +
Sbjct: 234 DGHDRLKGDAGDDRLNAGAGDDLVEGGT------------GLDVLTGGDGNDTLNGGAGN 281
Query: 534 EDLINAFADAPDLVQAGKD 552
+ + + G+D
Sbjct: 282 DVMSGGDGNDLLEDLEGED 300
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 55/400 (13%), Positives = 101/400 (25%), Gaps = 22/400 (5%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ DS + D D + G + + + GL +G
Sbjct: 214 GGAGNDSLIGDSGHDELQGDDGHDRLKGDAGDDRLNAGAGDDLVEGGTGLDVLTGGDGND 273
Query: 145 PVYGVDND------YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA--VQKIYG 196
+ G + ND ++ + G M + VA +Q YG
Sbjct: 274 TLNGGAGNDVMSGGDGNDLLEDLEGEDAQWGNTGITFDGGAGNDTMTASAVAETLQGGYG 333
Query: 197 APKGSL-GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ G N + Q + I + GG+D++ GG + ++
Sbjct: 334 NDVINAGGGNDFLYGDQGEADAGIDVMNGDGGNDVVY--SYGGADTIDGGADNDYVTLFR 391
Query: 256 YEKNMTIAQHTVIESVVGSS--GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
N + V+ + G + V+ N N F GND + G D F+ +
Sbjct: 392 RGANQGLTVDAVLAATAGGVVLADGTVLQNVENLAVFSGGGNDTYTGGGLNDEFWGGGGA 451
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
L E D ++ + + ++ A L
Sbjct: 452 DLAT---SGADGYDVIYGEAGNDTVAG------GGGRNELHGGEGDDMVTGGAGASFLYG 502
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D +G D+ + + N + G
Sbjct: 503 DGGNDSLTGGTGQNILWAGDGNDLLLSVGGWGTMLGEAGNDTLTGSDVVDTMIGGQGNDL 562
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
L A ++ + G D
Sbjct: 563 LSGGAGDDILNGDAGNDITNGGAGNDLIHAYEGVDTVDGG 602
Score = 41.7 bits (96), Expect = 0.43, Method: Composition-based stats.
Identities = 44/310 (14%), Positives = 78/310 (25%), Gaps = 38/310 (12%)
Query: 55 ARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGI 114
A W L S V+ E ++ F ++ N + + D G+
Sbjct: 904 ADWVLALRSYVLGTNVENLALAGSGHFTATGNVAANRMSGNGGNNLLDGLGGNDTLIGGL 963
Query: 115 GKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
G + + + V + DS + S+ +
Sbjct: 964 GNDSYVV-------------------DSSGDVVTENASEGTDSIVASLNWNLSANIENLT 1004
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
S V G GN + + T+ G+D +
Sbjct: 1005 FSGAANL---------VGHGNGLGNVLNGN---SGNNWLEGAAGNDTLSGGLGNDTFVID 1052
Query: 235 LIG----GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D S S + G + G++ N+++ GNS NN
Sbjct: 1053 AEDVVTELEGQGADWVLASRSYVLGANVENLAFGGAGNFTGNGNAANNIISGNSGNNWLD 1112
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
GND G G + N + + +E L F+
Sbjct: 1113 GGVGNDTLTGGLGN---DVLVVDGDDVVVEAANGGNDWVLANRSFNLGGHIEHLAFSGTG 1169
Query: 351 IDSVNVKQRS 360
+ N +
Sbjct: 1170 NFTGNGNAGN 1179
>gi|304392834|ref|ZP_07374766.1| Ig family protein [Ahrensia sp. R2A130]
gi|303295002|gb|EFL89370.1| Ig family protein [Ahrensia sp. R2A130]
Length = 4355
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 46/295 (15%), Positives = 84/295 (28%), Gaps = 19/295 (6%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G GN+IY ++ D+ T +G + T + +
Sbjct: 3992 SGGTGNDIYIVDD-IGDTITEDVGAGYDVVYTSATTTLGDNVEAAIVTTGGAVDVTANDL 4050
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + ++ + G +GND + + N+V +G D G G D Y + +
Sbjct: 4051 DNIMFGNSGDNVLRGLAGNDGIAAGAGNDVIDGGTGIDAMRGGDGDD--VYIVDNIADVV 4108
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQC-IDSVNVKQRSILEYTASYEDLIQVIGQ 377
N I + +DVE L +++ + + L+ V G
Sbjct: 4109 SESANEGIDRVESSVDYTLSTDVENLTLTGTDNLNARGNALDNTIIGNDGDNMLVGVGGN 4168
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR------NVFGSDRGAAARHYITHGV 431
D + G + + D G D A+ Y+
Sbjct: 4169 DTIQGGAGNDILGADGASTLLGGTGNDTYGVTDAATIVTELAGEGDDTVYASIDYVLGDN 4228
Query: 432 KEGR---------NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
E + Y + +D+IN L G + F E
Sbjct: 4229 LEVLIMQMGATSATGNELNNQIYGTAGDDIINGGDGQDFLEGSGGNDVFVFTQGE 4283
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/253 (16%), Positives = 79/253 (31%), Gaps = 17/253 (6%)
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL 235
T + + GA G+ I ++ + P D G + +
Sbjct: 815 GGDGNDTFKLGSTAINNQGNGADHIDGGDGIDTVDYSDQTDPGQAVNVDFQGIGSVTSST 874
Query: 236 IGGVKNYI---DLNTESWSSIG------GYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
+ N+ + S G T++ + G SG+D++ G + +
Sbjct: 875 GADGVSRQIDGSSNSGGFDSFDNIENIIGSAGGDTLSGDGGENRIEGGSGSDIISGRAGD 934
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD------ANEHKQDFLSD 340
+VF SGND DG G D Y + + + A + + D +S
Sbjct: 935 DVFVGGSGNDTIDGGIGNDEVVYETGTAVDGMAVQTGATLTVNSAFGTAGGTEGTDTISQ 994
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYED--LIQVIGQDVFESMKHFYEFGLSEGRDIT 398
E +RF D+ V I+ + + + D S + G D
Sbjct: 995 AETIRFQATGDDAFEVDASDIVIDIDANGNALVFAQNDDDNAVSELGSDDDGSGTANDFL 1054
Query: 399 FDSYLYLGSYDDL 411
+ + + + L
Sbjct: 1055 PGTTSNIATGNVL 1067
Score = 37.5 bits (85), Expect = 8.7, Method: Composition-based stats.
Identities = 47/342 (13%), Positives = 82/342 (23%), Gaps = 73/342 (21%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA---- 324
+ + G +GND + G ++ GNDV G +G DT I N
Sbjct: 634 DRLQGGAGNDFIDGGDGDDRITLGDGNDVGLGGNGDDTIIAGMGGGNDYIDGGNNGALGD 693
Query: 325 -------------IIVYDANEHKQDFLSDVE-RLRFADQCIDSVNV-------------- 356
++ ++ V+ FA Q I+ V
Sbjct: 694 TVTYPSITAATDMVVDLRGENRSGTTINGVDVDTAFAGQDINGVGYATNLPASSTEASLL 753
Query: 357 ---------------------------KQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
IL + L G D ++
Sbjct: 754 SGILPGGAADPVIGVDILKDIENATSGAGDDILIGNSGNNILDGGEGDDTLIGLEGADTL 813
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+G D LGS G+D T + +P A +
Sbjct: 814 LGGDGNDT-----FKLGSTAINNQGNGADHIDGGDGIDTVDYSDQTDPGQ-------AVN 861
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
D + G + G F +FD+ + + G
Sbjct: 862 VDFQGIGSVTSSTGADGVSRQIDGSSNSGGFDSFDNIENIIGSAGGDTLSGDGGENRIEG 921
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
+ GR D + ++ + + + + G
Sbjct: 922 GSGSDIISGRAGD--DVFVGGSGNDTIDGGIGNDEVVYETGT 961
>gi|221103239|ref|XP_002161129.1| PREDICTED: similar to matrix metalloproteinase, partial [Hydra
magnipapillata]
Length = 440
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 73/198 (36%), Gaps = 31/198 (15%)
Query: 7 VYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKV 65
V T ++ H R + ++ +K LT L+ + L+ N ++ + A +W V
Sbjct: 57 VATPDKSKLHDTRVRRYTAQGSMWKKSDLTWKLLNDNNDNLSRNQVEDALQQAFAKWEVV 116
Query: 66 VDLTFE----ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
+L F ++ H+DI + P + +++F + G G L
Sbjct: 117 TNLRFHKLEKNSNEHADIDVSFV-YPHGYYPNNNKGISGDLHFYDETHFTLGTTIGINLL 175
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A+HEIGH +GL H +S + M ++
Sbjct: 176 WVAVHEIGHCIGLEH---------------SSVENSIMYPRYKGCMGEN----------F 210
Query: 182 TPMVSDIVAVQKIYGAPK 199
T DI+ ++ IYG+
Sbjct: 211 TLSKDDILGIKSIYGSKT 228
>gi|238757395|ref|ZP_04618581.1| Serralysin [Yersinia aldovae ATCC 35236]
gi|238704434|gb|EEP96965.1| Serralysin [Yersinia aldovae ATCC 35236]
Length = 259
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 53/165 (32%), Gaps = 32/165 (19%)
Query: 43 DITELNPNAQEVARWALGEWSKVVDLTFEETSIH----SDIKFIS--------------- 83
+ ++ +E R AL W++V ++ F E + DI F +
Sbjct: 79 GLVSIDEGKREYIRKALLLWAEVANIEFIEIPENEINKGDITFSAFKLAATPLELRDSEN 138
Query: 84 ------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ T + EI + A + + LHEIGH
Sbjct: 139 EEYGSADKEYMIDDYEESVTVGFTFWGESEIWLNDAGNILADLSPQSDAQVTVLHEIGHV 198
Query: 132 LGLMHPG-SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
LGL HP N + + +++ S+MSY S
Sbjct: 199 LGLNHPFYDNNALKNNTKLPITHYDNTIQYSLMSYTSEYLSTASF 243
>gi|56681788|gb|AAW21430.1| leukotoxin A [Pasteurellaceae bacterium I7]
Length = 383
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 40/101 (39%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N I ++ + G + TI + + + G G+D++ G + ++ GND
Sbjct: 220 GTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGND 279
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G G D F + I + + ++ + +D
Sbjct: 280 LLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSNLKDL 320
Score = 42.9 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 47/208 (22%), Gaps = 48/208 (23%)
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIV---------- 327
++ F SG DG G D Y +Y + V
Sbjct: 116 GEGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKAL 175
Query: 328 --------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ A + +D L VE + K
Sbjct: 176 HEVTSTHTALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDA 235
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + G D K G D ++ G +DL + D
Sbjct: 236 FNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNG-----DDFIDGGKGNDLLHGGKGDDI- 289
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASH 449
H G + D L + S+
Sbjct: 290 -FVHRKGDGNDIITDSDGNDKLSFSDSN 316
>gi|218709385|ref|YP_002417006.1| putative hemolysin-type calcium-binding region [Vibrio splendidus
LGP32]
gi|218322404|emb|CAV18557.1| putative hemolysin-type calcium-binding region [Vibrio splendidus
LGP32]
Length = 1883
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 60/175 (34%), Gaps = 2/175 (1%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNT 247
+ + G N Y +V + + + G+D + T +
Sbjct: 1643 AVLDQNTGQASNQDAINTYIKDVFTQGRDSNVILNPNQGEDSEIAATNNSTANLDVAHGG 1702
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
I G + I + + + G GND + G + ++ SG+D+ G G D
Sbjct: 1703 GGSDYIYGEGGSDVIFGGSGDDVIDGGEGNDGLRGGTGHDTLKGGSGDDILIGGIGNDIL 1762
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ ++K + + + + + DF +++ +D + S+L
Sbjct: 1763 TGGSDDDIFKFVD-QGSGVRHGEKDTITDFTKGDDKIDISDLLHTDSSDSINSLL 1816
Score = 45.2 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 36/332 (10%), Positives = 78/332 (23%), Gaps = 28/332 (8%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
+ F+ G+ + +S E + L +
Sbjct: 1455 SGHLTQDGGFGADGGYVSQLVIDGVTFNFDGSTISSTGQNSKISFTKN-ESTNELKVTVD 1513
Query: 138 GSY------NGGYPVYGVDNDYENDSFLT-SVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G Y + G +G ++ + S SF + D+
Sbjct: 1514 GKYTLSIDMDTGSYKFGGKPQARPETVDFDYTLKDGDGDTSSSHISFDVMGSKGSVDV-- 1571
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ G + +++ + G + + + I++
Sbjct: 1572 ------SSTGKMIDSVKVLHDNLSWIGSPAVTNGQAGYNKIVDNVDINKGVSINVGDAG- 1624
Query: 251 SSIGGYEKNMTIAQH---TVIESVVGSSGNDVVIGNSANNVFF-ESSGNDVFDGSSGLDT 306
++ + + I V++ G + N I +VF N + + + G D+
Sbjct: 1625 DAVWTGQGDDVIYLGDSHAVLDQNTGQASNQDAINTYIKDVFTQGRDSNVILNPNQGEDS 1684
Query: 307 -FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
S Y E D + + L
Sbjct: 1685 EIAATNNSTANLDVAHGGGGSDYIYGEGGSDV------IFGGSGDDVIDGGEGNDGLRGG 1738
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
++ L G D+ DI
Sbjct: 1739 TGHDTLKGGSGDDILIGGIGNDILTGGSDDDI 1770
>gi|3005946|emb|CAA73317.1| enamelysin [Homo sapiens]
Length = 483
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 58/198 (29%), Gaps = 53/198 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T S ++ + AL WS V L+F + +DI
Sbjct: 117 WKKNTLTYRISKYTPSMSSVEVDK-------AVEMALQAWSSAVPLSFVRINSGEADIMI 169
Query: 82 ISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
N + P + +FD + W G G L A H
Sbjct: 170 SFENGDHGDSYPFDGPRGTLAHAFAP--GEGLGGDTHFDNPEKWTMGT-NGFNLFTVAAH 226
Query: 127 EIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
E GHALGL H YP Y N Y
Sbjct: 227 EFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKD------------------------- 261
Query: 186 SDIVAVQKIYGAPKGSLG 203
D+ +Q +YG K LG
Sbjct: 262 -DVKGIQALYGPRKVFLG 278
>gi|331015752|gb|EGH95808.1| mannuronan C-5-epimerase, putative [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 1610
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/408 (12%), Positives = 108/408 (26%), Gaps = 25/408 (6%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
DL +S + ++ G+S +D +IG++ N++ G D G G
Sbjct: 1201 DLGFRGNASDNNDPAAIFAGGQNEGGNIFGTSDDDTLIGSAGNDILDGDQGADQMTGGDG 1260
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSIL 362
D + + + + ++VE L ID ++++
Sbjct: 1261 NDIYVVDNALDTVTESNDSPSQVDTVVSSVSWTLGANVENLLLTGVSAIDGTGNALKNVI 1320
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+S + G D+ + + + + + + D +A
Sbjct: 1321 TGNSSDNVVDGGAGGDLLKGGDGSDSYY------VDDVADRVVETNSDAWVGGVDTVYSA 1374
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHED-LINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
Y E + D ++ A A + + +++
Sbjct: 1375 LASYTLGAHLENIAITRTDTANATGNALDNVLYAGAGDNVMGGRDGNDTASYLFASAGVT 1434
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF---KALEYIASHEDLIN 538
+ + GS G + + L A ++ L
Sbjct: 1435 ------VALNTSAQQATGGSGLDTLKGTENLTGSQFADSLTGNKNANVLNGGAGNDTLSG 1488
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
D + +G D + G FN D + +
Sbjct: 1489 GAGDDVLIGSSGAD--TLIGATGADRYVFNSID--EVGRDGLRDIINGFKVGEGDKLDFT 1544
Query: 599 MKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
+ R L + F + N + + + +L LY + +
Sbjct: 1545 GFDARPLTDTHDAFTFIGNSAFSANNTGELRF----ADGVLYGNVDDN 1588
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 68/512 (13%), Positives = 139/512 (27%), Gaps = 28/512 (5%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADV---WRYGIGKGTILSHNALHEI 128
E + + N T + + + + +F G +++ A HE+
Sbjct: 342 ERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVLGTEANDVITGGAAHEL 401
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD- 187
L + G + + + ++ Q + + AT +++D
Sbjct: 402 IFGLAGKDTLNGGTGDDILVGGAGADKLNGGAGADTFRFDQLTDSYRTATTSATDLLTDF 461
Query: 188 -------IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+A G G G + D+ G+ +L L G +K
Sbjct: 462 NVSQDRIDLANLGFTGLGSGKNGTLNISYNATLDRTYVKSLDVDASGN-RFELGLTGNLK 520
Query: 241 NYIDLNTESWSSIG-GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ ++ + + + G T+ + + G++G D + G + + + D
Sbjct: 521 DTLNASHFIFQRVTEGTAGGDTLTGTAGNDVINGNAGVDRIDGGAGADTINGGADADTLT 580
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENA----IIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
G +G D F Y + Y+ Y IV + LS + D +++
Sbjct: 581 GGAGADVFVYSSRLDSYRNYTAGGPKQSDTIVDFNVAEDRIDLSAIGLRGLGDGSANTLY 640
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ T + + G +++ L F S L
Sbjct: 641 LSLNGDGSKTYVKTNAVDTTGNRFEIALEGNLLEKLGASN-FIFSSASATNQAPVLNTPL 699
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA----DAPDLVQVGKDHFS 471
+ + + AL Y A+ D D+ L G +
Sbjct: 700 MDQIVTELKPFSYTVQPGSFSDPDSTALTYSATLADNSALPDWLKFDSKTLTFSGTPGGT 759
Query: 472 NFGCEEGRFVTFDSYL------YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
G D+ + + ++ + +A Y T G
Sbjct: 760 ASGLYSVLLTASDATGASVADSFAVNVGNVAPGIITGTESAEALYGTEGNDTLLGLGGDD 819
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNF 557
L + L A D F
Sbjct: 820 TLRGDTGADVLNGGAGRDALYGGADTDTFVYS 851
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 88/279 (31%), Gaps = 14/279 (5%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS----SIGG 255
N+ Y + + +D +I + + T G Y D + + ++ G
Sbjct: 331 TGSDNSTYGVAERNEDGTDRNSIVG----NTISHTSKGLTLVYGDGSFAGDAFPLVTVLG 386
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E N I E + G +G D + G + +++ +G D +G +G DTF + +
Sbjct: 387 TEANDVITGGAAHELIFGLAGKDTLNGGTGDDILVGGAGADKLNGGAGADTFRFDQLTDS 446
Query: 316 YKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ ++ D + L+++ ++N+ + L+ T +
Sbjct: 447 YRTATTSATDLLTDFNVSQDRIDLANLGFTGLGSGKNGTLNISYNATLDRTYVKSLDVDA 506
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G + + L+ I D L G+D GV
Sbjct: 507 SGNRFELGLTGNLKDTLNASHFIFQRVTEGTAGGDTLTGTAGNDVIN-----GNAGVDRI 561
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ A + L + D + N+
Sbjct: 562 DGGAGADTINGGADADTLTGGAGADVFVYSSRLDSYRNY 600
Score = 47.1 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 57/179 (31%), Gaps = 8/179 (4%)
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
D+ Y +D V + +D + A+ + + I + N
Sbjct: 1344 SDSYYVDDVADRVVETNSDAWVGGVDTVYSALASYTLGAHLENIAITRTDTANATGNA-- 1401
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNMTIA 263
++ + G+D L + LN S + + +
Sbjct: 1402 LDNVLYAGAGDNVMGGRDGNDTASY-LFASAGVTVALNTSAQQATGGSGLDTLKGTENLT 1460
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+S+ G+ +V+ G + N+ +G+DV GSSG DT + Y +
Sbjct: 1461 GSQFADSLTGNKNANVLNGGAGNDTLSGGAGDDVLIGSSGADTLIGATGADRYVFNSID 1519
>gi|209528317|ref|ZP_03276775.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209491250|gb|EDZ91647.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 848
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 7/131 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T+ G+D LD GG N L ++ G + N +
Sbjct: 621 GHDTIYGLAGNDTLIGGKGNDYLD----GGPGNDSLLGGAGHDTLIGGKGNDYLDGGPGN 676
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+S++G G D +IG + N+ G D+ G G D F + I
Sbjct: 677 DSLLGGPGRDTLIGGAGNDTLNGGPGQDILTGGPGADIFVFQFGESRVAAPDH---ITDL 733
Query: 329 DANEHKQDFLS 339
+ K D L+
Sbjct: 734 EIGTDKIDLLN 744
Score = 41.3 bits (95), Expect = 0.50, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 41/186 (22%), Gaps = 37/186 (19%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G N++ + G+D G +G DT D+L
Sbjct: 607 IRGTRGNDLLRGTPGHDTIYGLAGNDTLI----------------------GGKGNDYL- 643
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
L A ++ LI G D + GRD
Sbjct: 644 --------------DGGPGNDSLLGGAGHDTLIGGKGNDYLDGGPGNDSLLGGPGRDTLI 689
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
+ A G PD LE DL+N
Sbjct: 690 GGAGNDTLNGGPGQDILTGGPGADIFVFQFGESRVAAPDHITDLEIGTDKIDLLNRRGRD 749
Query: 460 PDLVQV 465
+
Sbjct: 750 IGAPEN 755
>gi|194213562|ref|XP_001503575.2| PREDICTED: similar to olfactory receptor, family 51, subfamily L,
member 1 (predicted) [Equus caballus]
Length = 592
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 67/190 (35%), Gaps = 51/190 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W+ + + Y+ + +++ AL WS V L F+E S +DI
Sbjct: 99 WNKHTLTYRIINYPREMKRDTV-------KDIILDALSIWSNVTSLIFQEAKSQDADITL 151
Query: 82 IS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
G+ P D+ I+FDK + W KG L A+H
Sbjct: 152 SFWDLAHGDDWPFDGPGGILGHAFLPDSDAP--GVIHFDKGEHWSNSY-KGFNLFLVAIH 208
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H GS +S + Y P+ V
Sbjct: 209 ELGHSLGLRHSGS---------------QNSIMYPSYVYHDPRTFH----------LGVD 243
Query: 187 DIVAVQKIYG 196
DI +Q++YG
Sbjct: 244 DIQRIQQLYG 253
>gi|166368255|ref|YP_001660528.1| hemolysin-type calcium-binding region protein [Microcystis
aeruginosa NIES-843]
gi|166090628|dbj|BAG05336.1| hemolysin-type calcium-binding region protein [Microcystis
aeruginosa NIES-843]
Length = 502
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 59/220 (26%), Gaps = 3/220 (1%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
G + I + + + G +GND + G+ ++ GND DG G DT
Sbjct: 21 GVIGWYSGLGGDDIIFGYDGDDFLDGGNGNDFLDGDDGSDTLHGGLGNDFLDGGDGNDTL 80
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID-SVNVKQRSILEYTA 366
+Y + + +D + L + D + L+
Sbjct: 81 --NGGLGDDTLYGGLGNDTSDGGDGNDLIIGNDGDDLLLGNAGNDFLIGNAGNDSLDGGL 138
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ L G D+ G D+ + L G
Sbjct: 139 GDDFLNGGDGNDILNGGVGVDSMDGGNGDDLYGVDNSGDIVRELLNTAPGGTADTVLSSV 198
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
F I + INA + + + VG
Sbjct: 199 TYSLAPGTLGTQGFGIENLILTGSANINATGNGANNILVG 238
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/440 (11%), Positives = 102/440 (23%), Gaps = 46/440 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T+Y G+D D GG N + + + + G N + +
Sbjct: 76 GNDTLNGGLGDDTLYGGLGNDTSD----GGDGNDLIIGNDGDDLLLGNAGNDFLIGNAGN 131
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK--IYRFENAII 326
+S+ G G+D + G N++ G D DG +G D + + + +
Sbjct: 132 DSLDGGLGDDFLNGGDGNDILNGGVGVDSMDGGNGDDLYGVDNSGDIVRELLNTAPGGTA 191
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ + + + L+ IG +V +
Sbjct: 192 DTVLSSVTYSLAPGTLGTQGFGIENLILTGSANINATGNGANNILVGNIGNNVLDGGLGN 251
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
+G DI G D + D + + A +
Sbjct: 252 DTLNGGDGNDILNG-----GVGVDSMDGGNGDDLYGVDNSGDIVRELLNTAPGGTADTVL 306
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+S + G ++ G + L + G A
Sbjct: 307 SSVTYSLAPGTLGTQGF--GIENLILTGSANINATGNGTNNILVGNIGNNVLGGGLGNDA 364
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNF---GYEEGR 563
L + + AG D F
Sbjct: 365 -----------------------------LNGSSGQDTLVDFAGSDLFWLDEIGLANRDL 395
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSR 623
F+ D + + + ++ F S + S
Sbjct: 396 IFGFSVLDDRIVLADRLDSSLVGFISPGIKGLGFTGGPLPGNPLNPASFFSGAGFTGGSL 455
Query: 624 DKADLSLSFDHKKVDLYTDY 643
A + + D++ +
Sbjct: 456 G-APSGIYVNTTNGDIWYND 474
Score = 40.9 bits (94), Expect = 0.61, Method: Composition-based stats.
Identities = 47/352 (13%), Positives = 85/352 (24%), Gaps = 52/352 (14%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+TS D + N ++ I D G+G + + +
Sbjct: 95 NDTSDGGDGNDLIIGNDGDDLLLGNAGNDFLIGNAGNDSLDGGLGDDFLNGGDGNDILNG 154
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
+G+ N G +YGVDN D + + + +S Y P
Sbjct: 155 GVGVDSMDGGN-GDDLYGVDNS--GDIVRELLNTAPGGTADTVLSSVTYSLAPGT----- 206
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
L G + L +
Sbjct: 207 ------------------------------------------LGTQGFGIENLILTGSAN 224
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G N + + + G GND + G N++ G D DG +G D +
Sbjct: 225 INATGNGANNILVGNIGNNVLDGGLGNDTLNGGDGNDILNGGVGVDSMDGGNGDDLYGVD 284
Query: 311 APSYLYK--IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ + + + + + +
Sbjct: 285 NSGDIVRELLNTAPGGTADTVLSSVTYSLAPGTLGTQGFGIENLILTGSANINATGNGTN 344
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
L+ IG +V S G+D D + D + D
Sbjct: 345 NILVGNIGNNVLGGGLGNDALNGSSGQDTLVDFAGSDLFWLDEIGLANRDLI 396
>gi|211063451|ref|NP_001129963.1| matrilysin [Ovis aries]
gi|209571739|gb|ACI62525.1| matrix metallopeptidase 7 [Ovis aries]
Length = 267
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 61/195 (31%), Gaps = 50/195 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKF 81
W++ + Y+ T+ + +L A WS+V+ LTF+ +DI
Sbjct: 104 WTSKVVTYRIMTYTSDLPHITVNQL-------VAKAFKIWSEVIPLTFKRVKWGTADIMI 156
Query: 82 ISS---------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ + P + +FD+ + W G G + A H
Sbjct: 157 GFARRAHGDPYPFDGPGATLAHAFAP--GPGLGGDAHFDEDERWTDASGIGINFLYVATH 214
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + + +N
Sbjct: 215 ELGHSLGLSHSSDPDAVMYPTYSKEESKN-------------------------FKLSQD 249
Query: 187 DIVAVQKIYGAPKGS 201
DI +QK+YG S
Sbjct: 250 DINGIQKLYGKRNDS 264
>gi|193783707|dbj|BAG53618.1| unnamed protein product [Homo sapiens]
Length = 510
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 52/165 (31%), Gaps = 42/165 (25%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDGPGGALAHA 208
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD+ + W +G L HEIGH LGL H P P Y
Sbjct: 209 FLPRRGEAHFDQDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKRLGRD 268
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
S+ D++AVQ +YG P
Sbjct: 269 ALLSWD---------------------------DVLAVQSLYGKP 286
>gi|119944034|ref|YP_941714.1| PKD domain-containing protein [Psychromonas ingrahamii 37]
gi|119862638|gb|ABM02115.1| PKD domain containing protein [Psychromonas ingrahamii 37]
Length = 3278
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/232 (13%), Positives = 64/232 (27%), Gaps = 9/232 (3%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
+L ID +T G + + + + + +G+D V+ N+
Sbjct: 1994 INLYYPDDDTSNSYDIDGSTGDDFVFGANRSDDYLVGLSGNDYIFAGNGDDHVVAGEGND 2053
Query: 288 VFFESS--GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ S GND ++G +G+DT Y + + D D S E++
Sbjct: 2054 LVIGGSGQGNDNYEGDAGVDTLKYTSAELPIIVDFISGTASGVD---IDNDIFSGFEKII 2110
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ +I+ + ++ G D EF ++ S+ +
Sbjct: 2111 AGQNNDVIITDANPNIVYGYDGDDIIVTSEGADELTGGNGKDEFIFNDLSKTRLSSFTTI 2170
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
Y V + T N +
Sbjct: 2171 VDY----QVEDTLVINGYTSMSTLAWSNNLNDSIIAIPNESQLYFTTDGNDG 2218
>gi|26354562|dbj|BAC40909.1| unnamed protein product [Mus musculus]
gi|74215233|dbj|BAE41839.1| unnamed protein product [Mus musculus]
Length = 403
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 59/185 (31%), Gaps = 49/185 (26%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 43 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 102
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 103 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 159
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S + Y P DI +Q
Sbjct: 160 LQHSNNPK---------------SIMYPTYRYLNPST----------FRLSADDIRNIQS 194
Query: 194 IYGAP 198
+YGAP
Sbjct: 195 LYGAP 199
>gi|262276071|ref|ZP_06053880.1| type I secretion target repeat protein [Grimontia hollisae CIP
101886]
gi|262219879|gb|EEY71195.1| type I secretion target repeat protein [Grimontia hollisae CIP
101886]
Length = 715
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 12/161 (7%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L GG + + I G E N TI T +++ G +GNDV++GN+ +++ +
Sbjct: 429 DDMLYGGAGDDTIYGEQGDDYIEGNEGNDTIRGGTGNDTIYGGAGNDVLLGNAGDDILYG 488
Query: 292 SSGNDVFDGSSGLDTFF------YYAPSYLYKIYRFENAIIVYDANEHKQDFL----SDV 341
G+D+ G SG D + Y Y + D L D
Sbjct: 489 GEGDDILRGGSGSDLLYGGAGNDYLQAGYDDDYSLDGGTGLDLYRGSEGNDTLYFDQEDF 548
Query: 342 ERLRFAD--QCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
L F + I + ++ + D
Sbjct: 549 SDLNFLNEHGNIYLGDRGFDQLIVDGDTNVDFTGASYGYTS 589
Score = 42.1 bits (97), Expect = 0.33, Method: Composition-based stats.
Identities = 55/378 (14%), Positives = 94/378 (24%), Gaps = 33/378 (8%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
E SD +N + F+ D G T+ N E+ +
Sbjct: 173 EAKGASDSYGALIDNVVLTQSSGADVNDTINGFEGDDFIDGLTGNDTLFGGNGNDEVYGS 232
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
G N G+ V G N F + + D TP S I
Sbjct: 233 EGNDV-IYGNDGFEVNGPRELLVNGDFEDYGNNTTNHWSPLHDHQVTGWYTPDNSIIELQ 291
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Q +G + N +S Q + D+T + + + + ++
Sbjct: 292 QGTFGGTPQNDVTNTVLELDSYANSRVQQDV---------DMTGLAADGDTVLALSFDYA 342
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD--TFFY 309
+ T I G+ N+ N +ES DV G D + +
Sbjct: 343 NRYRGWDTSTSQFEVKIFDQQGNVIYSKYFNNTQANDHYESFTTDVVI-PQGNDFISIRF 401
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + + + + D + +
Sbjct: 402 EGEGKSDSYGALIDNVSLKQKPDSESD-------------DDMLYGGAGDDTIYGEQGDD 448
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGA---A 422
+ G D G D+ D LY G DD+ A
Sbjct: 449 YIEGNEGNDTIRGGTGNDTIYGGAGNDVLLGNAGDDILYGGEGDDILRGGSGSDLLYGGA 508
Query: 423 ARHYITHGVKEGRNPDAF 440
Y+ G + + D
Sbjct: 509 GNDYLQAGYDDDYSLDGG 526
Score = 39.8 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 45/306 (14%), Positives = 87/306 (28%), Gaps = 13/306 (4%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT-----FF 308
G + N TI + + G +GND + G + N+ + S GNDV G+ G +
Sbjct: 194 SGADVNDTINGFEGDDFIDGLTGNDTLFGGNGNDEVYGSEGNDVIYGNDGFEVNGPRELL 253
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--VERLRFADQCIDSVNVKQRSILEYTA 366
Y + ++D + +E + +V ++LE +
Sbjct: 254 VNGDFEDYGNNTTNHWSPLHDHQVTGWYTPDNSIIELQQGTFGGTPQNDVT-NTVLELDS 312
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+Q + LS + + S +++ +F Y
Sbjct: 313 YANSRVQQDVDMTGLAADGDTVLALSFDYANRYRGWDTSTSQFEVK-IFDQQGNVIYSKY 371
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ + ++ + F G + ++ + D
Sbjct: 372 FNNTQANDHYESFTTDVVIPQGNDFISIRFEGEGKSDSYGALIDNVSLKQKPDSESDDDM 431
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
LY G+ DD D G R + A ++ L+ D
Sbjct: 432 LYGGAGDDTIYGEQGDDYIE----GNEGNDTIRGGTGNDTIYGGAGNDVLLGNAGDDILY 487
Query: 547 VQAGKD 552
G D
Sbjct: 488 GGEGDD 493
>gi|56681786|gb|AAW21429.1| leukotoxin A [Pasteurellaceae bacterium I11]
Length = 392
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 40/101 (39%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N I ++ + G + TI + + + G G+D++ G + ++ GND
Sbjct: 226 GTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGND 285
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G G D F + I + + ++ + +D
Sbjct: 286 LLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSNLKDL 326
Score = 42.9 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 47/208 (22%), Gaps = 48/208 (23%)
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIV---------- 327
++ F SG DG G D Y +Y + V
Sbjct: 122 GEGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKAL 181
Query: 328 --------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ A + +D L VE + K
Sbjct: 182 HEVTSTHTALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDA 241
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + G D K G D ++ G +DL + D
Sbjct: 242 FNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNG-----DDFIDGGKGNDLLHGGKGDDI- 295
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASH 449
H G + D L + S+
Sbjct: 296 -FVHRKGDGNDIITDSDGNDKLSFSDSN 322
>gi|125654687|ref|YP_001033881.1| hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
gi|77386347|gb|ABA81776.1| Hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
2.4.1]
Length = 313
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/257 (15%), Positives = 71/257 (27%), Gaps = 43/257 (16%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI-------GHALGLMHPG 138
+ TP + AD G G TI + + + G H
Sbjct: 20 SALAQTPAGTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGDGDDLLDGGFYHDA 79
Query: 139 SY-------------NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
Y + VYG D + + D
Sbjct: 80 CYGQAGNDTFRIRGVDLADDVYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPFGP 139
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ +++ + G+ + S +T+ G+D L+
Sbjct: 140 YVVKSIEIVIGSARA----------DVLLGSRLAETLSGGLGNDRLE------------- 176
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G E + T + ++G +GND + G +V +GND+ G G D
Sbjct: 177 GRGGADVLRGMEGADALFGGTGNDLLLGGAGNDRLDGQWERDVLVGGAGNDILIGGGGAD 236
Query: 306 TFFYYAPSYLYKIYRFE 322
F + +I F
Sbjct: 237 RFVFAGNFGRDRIRDFS 253
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 46/180 (25%), Gaps = 31/180 (17%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLD 305
G N + + +VG GND + G + + G+ D G +G D
Sbjct: 28 GTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGDGDDLLDGGFYHDACYGQAGND 87
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDAN----------------------EHKQDFLSDVER 343
TF +Y + + + +E
Sbjct: 88 TFRIRGVDLADDVYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPFGPYVVKSIEI 147
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + + + + L + L G DV M+ G D+
Sbjct: 148 VIGSARADVLLGSRLAETLSGGLGNDRLEGRGGADVLRGMEGADALFGGTGNDLLLGGAG 207
>gi|149053668|gb|EDM05485.1| matrix metallopeptidase 28 (epilysin) (predicted) [Rattus
norvegicus]
Length = 475
Score = 64.8 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 45/139 (32%), Gaps = 18/139 (12%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHA 208
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVY---GVD 150
E +FD+ + W +G L HEIGH LGL H P P Y G D
Sbjct: 209 FLPRRGEAHFDQDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRD 268
Query: 151 NDYENDSFLTSVMSYFMPQ 169
D L Y
Sbjct: 269 ALLSWDDVLAVQNLYDGQW 287
>gi|329848649|ref|ZP_08263677.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843712|gb|EGF93281.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 515
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/264 (15%), Positives = 76/264 (28%), Gaps = 9/264 (3%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ G N T S+ G + N T++ ++++G +G D + G + N++
Sbjct: 12 IGAVFPGTPGNDTYDGTAEADSVTGGDGNDTLSGGDGNDTLLGGNGADSLSGGAGNDLVL 71
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
GNDV G SG DT + +I + +D +S E
Sbjct: 72 AGLGNDVLYGGSGFDTVSF--ADLNGRISVNLGNGNAQNNYTGGRDIISQFENAIGTAFE 129
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+ + LE A + L G D + + + D+ ++
Sbjct: 130 DTLMGSSTGNRLEGGAGRDWLYGRGGADTLVGGTGDDLYFILDDGDVIIEAEGEGDDSLH 189
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
+ F + + + + + + +I G D
Sbjct: 190 TESDFDMNLAPFVE-------RASISTNLGIRIVGNDLNNSMIGNNGSDTFFGGAGDDRL 242
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDD 494
G YL D
Sbjct: 243 LTSGGGNDVMDGGAGDDYLAGSPD 266
Score = 42.5 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 49/183 (26%), Gaps = 6/183 (3%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES------W 250
+ + + GDD + I +
Sbjct: 329 GNSLNNTITGNAGNNWIDGAGGGDKMTGGLGDDTYYVDNIYDNVAELHWQGTDTVFSSVA 388
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S G + T + G+S + GNS NN + G+D G G DTF +
Sbjct: 389 YSFFGRAAEVLTLTGTGNINGTGNSLANTHTGNSGNNGLDGAGGHDTLTGGDGADTFLFL 448
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
S + F A +++ + + +I A+ D
Sbjct: 449 TASGKDTLTDFSAAQNDTINVNAYTGGVANNSLVAQVGGNVVIAFSASNTITVIGATQAD 508
Query: 371 LIQ 373
++
Sbjct: 509 VLA 511
>gi|209528104|ref|ZP_03276580.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209491463|gb|EDZ91842.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 260
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 28/127 (22%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N TI+ + +++ G G+D + G N++ F + G+D+ +G G DT +
Sbjct: 62 VNGNQGNDTISGGSNNDTLFGGQGDDFLYGGPGNDLLFGNLGDDLLEGGPGNDTIY---- 117
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
D +R D L A LI
Sbjct: 118 ------------------GGQGNDT------IRGNDGDNLLFGDLGNDFLYGGAGRNTLI 153
Query: 373 QVIGQDV 379
G D
Sbjct: 154 GGEGDDT 160
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T++ GDD L GG N + + G N TI
Sbjct: 67 GNDTISGGSNNDTLFGGQGDD----FLYGGPGNDLLFGNLGDDLLEGGPGNDTIYGGQGN 122
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+++ G+ G++++ G+ N+ + +G + G G DT+F
Sbjct: 123 DTIRGNDGDNLLFGDLGNDFLYGGAGRNTLIGGEGDDTYFLD 164
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 52/198 (26%), Gaps = 40/198 (20%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG--VKNYIDLNTESWSSIGGYEKN-MT 261
+ + + S GDD++ T + I L + S G+ + +
Sbjct: 2 TSFLTPSANLGIFGVNALLGSPGDDIIFATPGQSLPFPDGILLLAGNDSLQAGHITDPLL 61
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + +++ G S ND + G ++ + GND+ G+ G D
Sbjct: 62 VNGNQGNDTISGGSNNDTLFGGQGDDFLYGGPGNDLLFGNLGDD---------------- 105
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
L + + L +G D
Sbjct: 106 ---------------------LLEGGPGNDTIYGGQGNDTIRGNDGDNLLFGDLGNDFLY 144
Query: 382 SMKHFYEFGLSEGRDITF 399
EG D F
Sbjct: 145 GGAGRNTLIGGEGDDTYF 162
Score = 45.2 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 33/134 (24%), Gaps = 9/134 (6%)
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAP---SYLYKIYRFENAIIVYDANEHKQDFLSDV 341
N S G+D+ + G F + + + D +S
Sbjct: 15 GVNALLGSPGDDIIFATPGQSLPFPDGILLLAGNDSLQAGHITDPLLVNGNQGNDTISG- 73
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ L + L +G D+ E +G D +
Sbjct: 74 -----GSNNDTLFGGQGDDFLYGGPGNDLLFGNLGDDLLEGGPGNDTIYGGQGNDTIRGN 128
Query: 402 YLYLGSYDDLRNVF 415
+ DL N F
Sbjct: 129 DGDNLLFGDLGNDF 142
>gi|187606698|emb|CAP19940.1| matrix metallopeptidase 13 [Sparus aurata]
Length = 269
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 56/195 (28%), Gaps = 50/195 (25%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
W + Y+ + T ++ + AL W+KV L F S +D
Sbjct: 104 GLKWKKNSLTYRIENYTPDMSVAEVD-------DSIEKALQVWAKVTPLRFTRIYSDTAD 156
Query: 79 IKFISS---------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
I + P + +FD+ + + + G +L
Sbjct: 157 IMISFGRLSHGDSYPFDGPDGTLAHAFAP--APGLGGDAHFDEDETFTFRSNTGYVLFMV 214
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A HE GH+LGL H + + SY P
Sbjct: 215 AAHEFGHSLGLSHSDDPGA---------------LMYPIYSYHNPD----------SFAL 249
Query: 184 MVSDIVAVQKIYGAP 198
DI +Q +YG
Sbjct: 250 PRDDINGIQSLYGPN 264
>gi|307825609|ref|ZP_07655827.1| Hemolysin-type calcium binding domain protein [Methylobacter
tundripaludum SV96]
gi|307733495|gb|EFO04354.1| Hemolysin-type calcium binding domain protein [Methylobacter
tundripaludum SV96]
Length = 700
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 64/507 (12%), Positives = 121/507 (23%), Gaps = 64/507 (12%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
F T + D G G ++ + G
Sbjct: 77 FDLDGTSGDDTITGTNTTDRINGLGGNDTLIGGAGNDSLDGGAGADILMGGAG----DDT 132
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
D E + L + + + +G + DI +
Sbjct: 133 YLAVTGEDTLIDTEGHNILQLAQANGLGAGGLKATHYGSQNQYLRLDIALDNSGILKIQD 192
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ ++ + ++T+ + L+L L + G N
Sbjct: 193 AFYGTDATLQFANGNQLDLETLVGTSLTTALNLQLDNSGGK-----------LYGGAGND 241
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + + + G+ G+D + G + N+ + D+ G +G D + A S I
Sbjct: 242 RLYGGSGGDRLSGAWGDDTLSGGAGNDTLIGGADRDLLLGGAGNDIYELSATSGADLITD 301
Query: 321 FENAIIVYDANEHKQDFLS-----------------DVER-----------LRFADQCID 352
E I+ A + L+ VE FAD
Sbjct: 302 TEGQNIIRFAADISAANLTVSTTTMAGQPALRMKVNGVEDATITSGVDHYSFEFADGSRM 361
Query: 353 SVNVKQRS------ILEYTASYEDLIQVIGQDVFESMKHFYEFG---LSEGRDITFDSYL 403
+ + + + + L D + + D S
Sbjct: 362 TSAEFLLNFRAEPQTVYGNDTGDTLYGGQAADTLYGQEGNDSLWGGAGDDLLDGGLGSDD 421
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD----- 458
Y D ++V + V G + DL A
Sbjct: 422 YHYRPGDGQDVIQETDMPGSGQSSQDRVIFGAGIALSDVTFNHQPNGDLSVTVAGLADAI 481
Query: 459 -APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
F +GR +T D+ L L+ G+D + +
Sbjct: 482 TVTGWYTDPAKRVEAFEFADGRQITADTLAALDVTP-LQGSAGNDPLSGTDYRDIILAGA 540
Query: 518 GRNPDAFKALEYIASHEDLINAFADAP 544
G L ++DL
Sbjct: 541 GD-----DQLIGNGGNDDLHGETGTDT 562
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 73/265 (27%), Gaps = 17/265 (6%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D+ V ++ + S + + + +++ G++ D + G N
Sbjct: 44 GFDPNDVFNSSSVSTFVFADGTELSINQLLARGFDLDGTSGDDTITGTNTTDRINGLGGN 103
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ +GND DG +G D + + D H L
Sbjct: 104 DTLIGGAGNDSLDGGAGADILM--GGAGDDTYLAVTGEDTLIDTEGHNILQL-------- 153
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ + Y + + L I D +K F G
Sbjct: 154 --AQANGLGAGGLKATHYGSQNQYLRLDIALDNSGILKIQDAFYG-----TDATLQFANG 206
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ DL + G+ A + + + L + + L A+ D G
Sbjct: 207 NQLDLETLVGTSLTTALNLQLDNSGGKLYGGAGNDRLYGGSGGDRLSGAWGDDTLSGGAG 266
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGS 491
D + + +Y S
Sbjct: 267 NDTLIGGADRDLLLGGAGNDIYELS 291
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 77/300 (25%), Gaps = 21/300 (7%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDV-FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+ +I + +GN+V +G D F + S E +I A
Sbjct: 16 TGVNHSDIILRLGSLELDLGNGNEVHIEGFDPNDVFNSSSVSTFVFADGTELSINQLLAR 75
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D S + + + + L A + L G D+ +
Sbjct: 76 GFDLDGTSGDDTITGTNTTDRINGLGGNDTLIGGAGNDSLDGGAGADILMGGAGDDTYLA 135
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
G D D+ + N G+ A + + +Y+
Sbjct: 136 VTGEDTLIDTEGHNILQLAQANGLGAGGLKATHYGSQN--------------QYLRLDIA 181
Query: 452 LINAF---ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA-- 506
L N+ F+N + + L L N G G A
Sbjct: 182 LDNSGILKIQDAFYGTDATLQFANGNQLD-LETLVGTSLTTALNLQLDNSGGKLYGGAGN 240
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
R Y G L A ++ LI L AG D + IT
Sbjct: 241 DRLYGGSGGDRLSGAWGDDTLSGGAGNDTLIGGADRDLLLGGAGNDIYELSATSGADLIT 300
Score = 42.9 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 31/78 (39%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G+ D+++ + ++ + GND G +G DT+ +++ E
Sbjct: 520 GSAGNDPLSGTDYRDIILAGAGDDQLIGNGGNDDLHGETGTDTYRLSRGGGADQVFEVEG 579
Query: 324 AIIVYDANEHKQDFLSDV 341
+ + + + L+
Sbjct: 580 ETSMIEVSAYNLSRLTGT 597
>gi|126327140|ref|XP_001366784.1| PREDICTED: similar to matrix metalloproteinase 1 (interstitial
collagenase) [Monodelphis domestica]
Length = 469
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/192 (22%), Positives = 62/192 (32%), Gaps = 47/192 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y + T D+ + R A WS V LTF + S +DIK
Sbjct: 107 WDKNNLTYSIENYTPDLAREDVD-------DAFRKAFKVWSDVSPLTFTKISKGEADIKI 159
Query: 82 ISS-----NNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ +N P + +FD+ + W K L H A HE
Sbjct: 160 SFNYRDHYDNSPFDGPNGILAHAFQPGPGIGGDAHFDEEERWTKD-HKNYNLYHVAAHEF 218
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H S + G +Y + D+ S DI
Sbjct: 219 GHSLGLAH--SSDIGALMYPTYGFNDLDNIQLSQ-----------------------DDI 253
Query: 189 VAVQKIYGAPKG 200
+Q IYG
Sbjct: 254 DGIQAIYGPSNN 265
>gi|68137220|gb|AAY85550.1| matrix metalloproteinase [Chlamys farreri]
Length = 541
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 45/139 (32%), Gaps = 16/139 (11%)
Query: 48 NPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEI----- 102
+ + R A W+ LTF E + +DI+ + + +D +
Sbjct: 154 STVVRSEIRRAFALWAAETPLTFREVTRSADIEIDFNTGSHGDGSPFDGPSGVLAHAFFP 213
Query: 103 -----NFDKADVWRYG--IGKGTILSHNALHEIGHALGLMHPGSYNGGYPV----YGVDN 151
+FD + W G+G A HE GHALGL H N Y D
Sbjct: 214 ELGTTHFDDQEQWTTNSTTGRGIDPFIVAAHEFGHALGLDHSNVRNALMFPTYLGYIPDF 273
Query: 152 DYENDSFLTSVMSYFMPQD 170
ND Y P
Sbjct: 274 KLNNDDIRGIRSIYGGPPT 292
>gi|6678896|ref|NP_032633.1| collagenase 3 preproprotein [Mus musculus]
gi|461764|sp|P33435|MMP13_MOUSE RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; Flags: Precursor
gi|53604|emb|CAA47102.1| procollagenase [Mus musculus]
gi|74144340|dbj|BAE36033.1| unnamed protein product [Mus musculus]
gi|74178022|dbj|BAE29805.1| unnamed protein product [Mus musculus]
gi|74196011|dbj|BAE30561.1| unnamed protein product [Mus musculus]
gi|74204845|dbj|BAE35483.1| unnamed protein product [Mus musculus]
gi|74220177|dbj|BAE31273.1| unnamed protein product [Mus musculus]
gi|74225324|dbj|BAE31593.1| unnamed protein product [Mus musculus]
gi|116138461|gb|AAI25323.1| Matrix metallopeptidase 13 [Mus musculus]
gi|116138812|gb|AAI25321.1| Matrix metallopeptidase 13 [Mus musculus]
gi|148692985|gb|EDL24932.1| matrix metallopeptidase 13 [Mus musculus]
Length = 472
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 61/198 (30%), Gaps = 53/198 (26%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ R A WS V L F +
Sbjct: 110 RTLKWSQTNLTYRIVNYTPDMSHSEV-------EKAFRKAFKVWSDVTPLNFTRIYDGTA 162
Query: 78 DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + P Y + +FD + W KG L
Sbjct: 163 DIMISFGTKEHGDFYPFDGPSGLLAHAFPP--GPNYGGDAHFDDDETWT-SSSKGYNLFI 219
Query: 123 NALHEIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE+GH+LGL H +P+Y + S+FM D
Sbjct: 220 VAAHELGHSLGLDHSKDPGALMFPIYT-----------YTGKSHFMLPD----------- 257
Query: 182 TPMVSDIVAVQKIYGAPK 199
D+ +Q +YG
Sbjct: 258 ----DDVQGIQFLYGPGD 271
>gi|47213300|emb|CAF96568.1| unnamed protein product [Tetraodon nigroviridis]
Length = 560
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 57/211 (27%), Gaps = 61/211 (28%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SD 78
W + YK Q V + A G WS V L F E + +D
Sbjct: 178 GGRWEKTDLTYKILRFPWQMSE-------AKVQHVLQEAFGVWSAVSPLRFREVTSDQAD 230
Query: 79 IKFISSN---------------------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
I ++ + PR + E++FD + W G G
Sbjct: 231 IIIDFNSCGSWAGTGMATAYPSTALAGILAHAFFPRTHRQ--GEVHFDYDEHWTVGNDLG 288
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
L A HE GH LGL H + S
Sbjct: 289 MDLLQVAAHEFGHVLGLQHSLEPGAVMSPF---------------------------YSE 321
Query: 178 GYCATPMVSDIVAVQKIYGAPKG---SLGNN 205
Y D+ +Q +YG P G+
Sbjct: 322 SYPPRLSQDDVRGIQYLYGPPLTVPPQTGDT 352
>gi|27806001|ref|NP_776815.1| matrix metalloproteinase-14 precursor [Bos taurus]
gi|75056123|sp|Q9GLE4|MMP14_BOVIN RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
Full=Membrane-type matrix metalloproteinase 1;
Short=MT-MMP 1; Short=MTMMP1; AltName:
Full=Membrane-type-1 matrix metalloproteinase;
Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
gi|11055605|gb|AAG28170.1|AF290429_1 membrane-type matrix metalloprotease 1 [Bos taurus]
Length = 582
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 44/162 (27%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + + E R A W L F E
Sbjct: 113 IQGLKWQHNEITFCIQNYTPNVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 165
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 166 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 225
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 226 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 267
>gi|74151942|dbj|BAE32010.1| unnamed protein product [Mus musculus]
Length = 472
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 61/198 (30%), Gaps = 53/198 (26%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ R A WS V L F +
Sbjct: 110 RTLKWSQTNLTYRIVNYTPDMSHSEV-------EKAFRKAFKVWSDVTPLNFTRIYDGTA 162
Query: 78 DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + P Y + +FD + W KG L
Sbjct: 163 DIMISFGTKEHGDFYPFDGPSGLLAHAFPP--GPNYGGDAHFDDDETWT-SSSKGYNLFI 219
Query: 123 NALHEIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE+GH+LGL H +P+Y + S+FM D
Sbjct: 220 VAAHELGHSLGLDHSKDPGALMFPIYT-----------YTGKSHFMLPD----------- 257
Query: 182 TPMVSDIVAVQKIYGAPK 199
D+ +Q +YG
Sbjct: 258 ----DDVQGIQFLYGPGD 271
>gi|17231151|ref|NP_487699.1| hypothetical protein alr3659 [Nostoc sp. PCC 7120]
gi|17132792|dbj|BAB75358.1| alr3659 [Nostoc sp. PCC 7120]
Length = 589
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 63/227 (27%), Gaps = 13/227 (5%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
GG ++ + + G + + + + G GND + G N+ GN
Sbjct: 14 YGGDESDTIKGFAGYDYLYGGLGDDYLYGGLDNDKLYGGLGNDKLYGGEGNDNLNGEQGN 73
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-----VERLRFADQC 350
+ G +G DT + + E +Y + + L + +RF+
Sbjct: 74 NSLYGEAGDDTLDAGNSTGNNLLDGGEGNDEIYVYSSSGNNTLKGGVGNDILDVRFSYGK 133
Query: 351 IDSVNVKQRSILE--YTASYEDLIQVIGQDVFESM--KHFYEFGLSEGRDITFDSYLYLG 406
L Y+ L G D +G DI SY + G
Sbjct: 134 NILDGGSGNDQLYARYSQGNNTLRGGSGDDYLGVDLSAGNNVLNGDDGNDILDVSYQWKG 193
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
V G + Y G + + D +
Sbjct: 194 KN----IVSGGNGNDIFYAYGVQGANTLNGGSGDDSFYISSPSADTV 236
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 79/583 (13%), Positives = 155/583 (26%), Gaps = 42/583 (7%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH--PGSYNG 142
F D G+G + ++ LG G N
Sbjct: 6 GTNSNDYLYGGDESDTIKGFAGYDYLYGGLGDDYLYGGLDNDKLYGGLGNDKLYGGEGND 65
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+N ++ ++ + ++++D G +Y + +
Sbjct: 66 NLNGEQGNNSLYGEAGDDTLDAGNSTGNNLLDGGEG----------NDEIYVYSSSGNNT 115
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
++ + + I D G G+D L G + + + + N
Sbjct: 116 LKGGVGNDILDVRFSYGKNILDGGSGNDQLYARYSQGNNTLRGGSGDDYLGVDLSAGNNV 175
Query: 262 IAQHTVIESVVGS---SGNDVVIGNSANNVF--FESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ + + S G ++V G + N++F + G + +G SG D+F+ +PS
Sbjct: 176 LNGDDGNDILDVSYQWKGKNIVSGGNGNDIFYAYGVQGANTLNGGSGDDSFYISSPSADT 235
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + D+L ++ S N + L + + + I
Sbjct: 236 VV---HPLVTQTVDGGIGNDYLY-IDYSTAIAGITSSFNTTTKQGLITADTNQVRYKNIE 291
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+ H DI G D L G+D + +H G
Sbjct: 292 RLNIIGTSHDDIIVGGNSDDII---DGGSGGNDTLNGGAGNDILIIRDNSRSHNTVYGGA 348
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ A L + + +F N D+ GSY +
Sbjct: 349 GNDSLYANGTAGTNLLDGGDGNDYLSAKNNYSYFFNASQTLIGGAGDDTLDVSGSYGNNF 408
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED----------LINAFADAPDL 546
G+ Y + D +Y+++ L +
Sbjct: 409 LYGGAGNDFLYADYSVGLHR----LDGGDGDDYLSAKSSSSRFIINTHILDGGAGNDILD 464
Query: 547 VQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM-KEGRAL 605
V + + G + L ++ G DR H + G
Sbjct: 465 VGSARAKNKLMGGTGDDILI--GGLNEDTFVFKNYHEGVDRIYNFDHLDRIQICAVGFGG 522
Query: 606 GISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
+S D +D LY D G+G+
Sbjct: 523 DLSPDSLSVGQFTLGTVATTNDQRFIYDTSTGALYFDQDGNGS 565
>gi|32033986|ref|ZP_00134242.1| COG2931: RTX toxins and related Ca2+-binding proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 1676
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 66/540 (12%), Positives = 134/540 (24%), Gaps = 112/540 (20%)
Query: 66 VDLTFEETSI---HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ F E++ + + + I + D + G T L
Sbjct: 1077 AGVIFAESTDLKGDEKNNILLGSQKDNNLSGSAGD-DLLIGGEGNDTLKGSYGADTYLFS 1135
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
G ++ + D+ + ++Y +
Sbjct: 1136 KG------------HGQDVIYEYSDSANSKSDIDTLKFTDVNYAEVKF------------ 1171
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+G+++ DS +++ Y+ L
Sbjct: 1172 -----------------RRVGDDLMLFGYHDTDSVTVKSFYNHEYYQFEKLEFADRSITR 1214
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+L + ++ G + + I + +GND + G+ ++ +GND+ GS
Sbjct: 1215 DELGKQGM-ALFGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTGNDILKGSY 1273
Query: 303 GLDTFFYYAPSYLYKIYRFEN--------------------------AIIVYDANEHKQD 336
G DT+ + IY + + + H D
Sbjct: 1274 GADTYLFSKGHGQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVGDDLMLFGYHDTD 1333
Query: 337 FLS----------DVERLRFADQCID----------SVNVKQRSILEYTASYED-LIQVI 375
++ E+L FAD+ I + A ++ L
Sbjct: 1334 SVTVKSFYDHEYYQFEKLEFADRSISRDELIKAGLHLYGTDGNDEINDHADWDSILEGGK 1393
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D+ + S+G + Y D N VK R
Sbjct: 1394 GNDILRGSYGADTYIFSKGH-----GQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRR 1448
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
+ Y + I +F + F + R +T D
Sbjct: 1449 VDNDLMLFGYHDTDSVTIKSFYNH------VDYQFDKLEFAD-RSITRDEL-----GKQG 1496
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+FG+D + + + + LI + G D +
Sbjct: 1497 MALFGTDGDDNINDWGRN--SVIDAGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYI 1554
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 10/96 (10%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + +GND V G + ++ GND+ G G DT+ +
Sbjct: 1499 LFGTDGDDNINDWGRNSVIDAGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYIFSKG 1558
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+Y N D++ L+F D
Sbjct: 1559 HGQDIVYEDTNNDN----------RARDIDTLKFTD 1584
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 50/411 (12%), Positives = 105/411 (25%), Gaps = 133/411 (32%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK----GTILSHNALHEIGH 130
+D ++ G + D G G G+ + L GH
Sbjct: 1225 FGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYLFSKGH 1284
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G ++ + D+ + ++Y +
Sbjct: 1285 -------GQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKF-------------------- 1317
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+G+++ DS +++ YD E +
Sbjct: 1318 ---------RRVGDDLMLFGYHDTDSVTVKSFYDH----------------------EYY 1346
Query: 251 SSIGGYEKNMTIAQHTVIE---SVVGSSGNDVVIGN-SANNVFFESSGNDVFDGSSGLDT 306
+ +I++ +I+ + G+ GND + + +++ GND+ GS G DT
Sbjct: 1347 QFEKLEFADRSISRDELIKAGLHLYGTDGNDEINDHADWDSILEGGKGNDILRGSYGADT 1406
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANE--------------------------HKQDFLS- 339
+ + IY + ++ + H D ++
Sbjct: 1407 YIFSKGHGQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVDNDLMLFGYHDTDSVTI 1466
Query: 340 ---------DVERLRFADQCID----------------------------SVNVKQRSIL 362
++L FAD+ I +
Sbjct: 1467 KSFYNHVDYQFDKLEFADRSITRDELGKQGMALFGTDGDDNINDWGRNSVIDAGAGNDTV 1526
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ LI G D+ + S+G +Y + +D R
Sbjct: 1527 NGGNGDDTLIGGKGNDILRGGYGADTYIFSKGHG---QDIVYEDTNNDNRA 1574
>gi|115923415|ref|XP_786263.2| PREDICTED: similar to matrix metalloproteinase 16
[Strongylocentrotus purpuratus]
gi|115934683|ref|XP_001180589.1| PREDICTED: similar to matrix metalloproteinase 16
[Strongylocentrotus purpuratus]
Length = 571
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 67/204 (32%), Gaps = 50/204 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH--- 76
+ W+ + Y+ T R + ++E+ + R A WS V L F E
Sbjct: 112 NYRWNKETLTYRIVNFPTMRKASSVSEV--QVRHDVRMAFKLWSDVTPLVFIEVHDDTVE 169
Query: 77 ----------------SDIKFIS--SNNGYVCTPRYD-SRYFMEINFDKADVWRYGIGKG 117
D F + TP + +++FD + + + I G
Sbjct: 170 VDIELKFGSRVHTSVYGDPAFDGEGGTLAHAFTPNSGWGKTNGDVHFDDDEHFTHKIYSG 229
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
L + HEIGHALGL H + +S + P D +F
Sbjct: 230 VNLFYTTAHEIGHALGLDHSD---------------QRNSLMW-------PWDKGYIPNF 267
Query: 178 GYCATPMVSDIVAVQKIYGAPKGS 201
+ D + +Q +YG +
Sbjct: 268 RLP----LDDKLGIQVVYGGNTKN 287
>gi|112789936|gb|ABI21610.1| Smu14 [uncultured organism]
Length = 467
Score = 64.4 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 51/342 (14%), Positives = 93/342 (27%), Gaps = 29/342 (8%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D +L G N + ++ G + + + +++ G G DV+ G++ N
Sbjct: 33 GSDPAGNSLFGLSGNDSIIGNTGNDTLSGGDGDDALTGRGGNDTLDGGDGIDVLNGDAGN 92
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+V GND +GS G D+ + NA Y D L E +
Sbjct: 93 DVLVAGLGNDTLNGSDGNDSL--TGGVGNDLLQGGNNADTYYFNRGDGVDTLQ--ESGDW 148
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+D + + A + +G D+ L +G +TF ++ +G
Sbjct: 149 SDTANYGGSADKVVFGPGIAVADITFTHVGNDLV--------MDLGQGDKLTFKNWYVVG 200
Query: 407 SY--------------DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
SY + T+G L ++ L
Sbjct: 201 SYGYMAYQVENFQFADGTTFSALNLLNTKGVDQTGTNGDDVLNGGPETDRLTGGLGNDTL 260
Query: 453 INAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
A + G D S + G ++ G
Sbjct: 261 NGASGNDMLDGGDGNDTLSGGSGVDVLLGGLGDDQLSGGTENDSLDGGDGNDVLNGDAGN 320
Query: 513 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+ G L ++ L + D +
Sbjct: 321 DVLVAGL---GNDTLNGSDGNDSLTGGVGNDLLQGGNNADTY 359
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 15/261 (5%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEI-NFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ NN + D +D YG ++ +
Sbjct: 118 GNDLLQGGNNADTYYFNRGDGVDTLQESGDWSDTANYGGSADKVVFGPGIAVADITF--T 175
Query: 136 HPGSYNGGYPVYGVDNDYENDSF--LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
H G+ G ++N M+Y + D + + + V
Sbjct: 176 HVGNDLVMDLGQGDKLTFKNWYVVGSYGYMAYQVENFQFADGTTFSALNLLNTKGVDQTG 235
Query: 194 IYGAPKGSLGNNIYK-----IEVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYI 243
G + G + + + G+D L GG+ +
Sbjct: 236 TNGDDVLNGGPETDRLTGGLGNDTLNGASGNDMLDGGDGNDTLSGGSGVDVLLGGLGDDQ 295
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
S+ G + N + + +V GND + G+ N+ GND+ G +
Sbjct: 296 LSGGTENDSLDGGDGNDVLNGDAGNDVLVAGLGNDTLNGSDGNDSLTGGVGNDLLQGGNN 355
Query: 304 LDTFFYYAPSYLYKIYRFENA 324
DT+++ + + +
Sbjct: 356 ADTYYFNRGDGVDTLQESGDW 376
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/352 (13%), Positives = 86/352 (24%), Gaps = 25/352 (7%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
++ + S I D G G + + G+ G
Sbjct: 33 GSDPAGNSLFGLSGNDSIIGNTGNDTLSGGDGDDALTGRGGNDTLDGGDGIDVLNGDAGN 92
Query: 144 YP-VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-IVAVQKIYGAPKGS 201
V G+ ND N S ++ + D + + D + +Q+ +
Sbjct: 93 DVLVAGLGNDTLNGSDGNDSLTGGVGNDLLQGGNNADTYYFNRGDGVDTLQESGDWSDTA 152
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL-NTESWSSIGGYEKNM 260
V + G+DL+ G + + S+ + +N
Sbjct: 153 NYGGSADKVVFGPGIAVADITFTHVGNDLVMDLGQGDKLTFKNWYVVGSYGYMAYQVENF 212
Query: 261 TIAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
A T +++ + G D G + ++V D G G DT S +
Sbjct: 213 QFADGTTFSALNLLNTKGVDQ-TGTNGDDVLNGGPETDRLTGGLGNDTL--NGASGNDML 269
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + + L + L G D
Sbjct: 270 DGGDGNDTLSGGS-----------------GVDVLLGGLGDDQLSGGTENDSLDGGDGND 312
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
V G D S + N A +Y G
Sbjct: 313 VLNGDAGNDVLVAGLGNDTLNGSDGNDSLTGGVGNDLLQGGNNADTYYFNRG 364
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 73/285 (25%), Gaps = 37/285 (12%)
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+ ++ + A N F SGND G++G DT + +
Sbjct: 29 DVLIGSDPAGNSLFGLSGNDSIIGNTGNDTL--SGGDGDDALTGRGGNDTL--------- 77
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+L A + L+ +G D G D
Sbjct: 78 -----------------DGGDGIDVLNGDAGNDVLVAGLGNDTLNGSDGNDSLTGGVGND 120
Query: 397 ITFD----SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF-KALEYIASHED 451
+ Y D + + S + +Y K P + + D
Sbjct: 121 LLQGGNNADTYYFNRGDGVDTLQESGDWSDTANYGGSADKVVFGPGIAVADITFTHVGND 180
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD-SYLYLGSYDDLRNVFGSDRGAAARHY 510
L+ L ++G + F + S +L N G D+
Sbjct: 181 LVMDLGQGDKLTFKNWYVVGSYGYMAYQVENFQFADGTTFSALNLLNTKGVDQTGTNGDD 240
Query: 511 ITHGVKEGRNPD---AFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ +G E L + ++ L + +G D
Sbjct: 241 VLNGGPETDRLTGGLGNDTLNGASGNDMLDGGDGNDTLSGGSGVD 285
>gi|284041978|ref|YP_003392318.1| Hemolysin-type calcium-binding region [Conexibacter woesei DSM
14684]
gi|283946199|gb|ADB48943.1| Hemolysin-type calcium-binding region [Conexibacter woesei DSM
14684]
Length = 534
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 75/264 (28%), Gaps = 27/264 (10%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
T+ GG + + G N + + + G +GND + G N+
Sbjct: 147 ATVTGGSADDWFVGGSGPDQFDGGGGNDQLFGGGNDDVLTGGTGNDRLEGADGNDQLLGG 206
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE--HKQDFLSDVERLRFA-DQ 349
G+DV G G D A + + + L E + + D
Sbjct: 207 DGDDVLRGGGGNDLEDAGAGNDRLGGGDADPGADDLRGGPGFDELQLLEHAEGVAISLDD 266
Query: 350 CIDSVNVK----------------QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ N TA + +G DV E S
Sbjct: 267 VANDGNPGEGDNHRSDLEKVVGSPGNDTYAGTAGNDVFDGSLGDDVARGGGGNDELSGSS 326
Query: 394 GRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYIT---HGVKEGRNPDAFKALEYI 446
G D F + LY G DD G+ + Y +G G + + E
Sbjct: 327 GADQLFGDAGNDTLYGGDGDDRVEG-GAGLDSLYGDYANCSAYGCSAGNDQLFARDNEAD 385
Query: 447 ASHEDLINAFADAPDLVQVGKDHF 470
+ + A + VG+D F
Sbjct: 386 SLNCGSGADSAQVDAVDTVGQDGF 409
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 57/275 (20%), Gaps = 65/275 (23%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
V G SA++ F SG D FDG G D F D
Sbjct: 147 ATVTGGSADDWFVGGSGPDQFDGGGGNDQLF-------------GGGNDDVLTGGTGNDR 193
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
L L + L G D+ ++ G +
Sbjct: 194 LEG---------------ADGNDQLLGGDGDDVLRGGGGNDLEDAGAGNDRLGGGDADP- 237
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
DDLR G D H + + E DL
Sbjct: 238 ---------GADDLRGGPGFDELQLLEHAEGVAISLDDVANDGNPGEGDNHRSDLEKVVG 288
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ G F S D G G E
Sbjct: 289 SPGNDTYAGTAGNDVFDG---------------SLGDDVARGGG------------GNDE 321
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L A ++ L D AG D
Sbjct: 322 LSGSSGADQLFGDAGNDTLYGGDGDDRVEGGAGLD 356
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 72/277 (25%), Gaps = 26/277 (9%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
+ F + D G + + A G
Sbjct: 147 ATVTGGSADDWFVGGSGPDQFDGGGGN--DQLFGGGNDDVLTGGTGNDRLEGADGNDQLL 204
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT------------PMVS 186
+G + G + D+ + D D G +
Sbjct: 205 GGDGDDVLRGGGGNDLEDAGAGNDRLGGGDADPGADDLRGGPGFDELQLLEHAEGVAISL 264
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVKN 241
D VA G + + SP T + G+D+ D +L GG N
Sbjct: 265 DDVANDGNPGEGDNHRSD-----LEKVVGSPGNDTYAGTAGNDVFDGSLGDDVARGGGGN 319
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE-SSGNDVFDG 300
+ + G N T+ + V G +G D + G+ AN + S+GND
Sbjct: 320 DELSGSSGADQLFGDAGNDTLYGGDGDDRVEGGAGLDSLYGDYANCSAYGCSAGNDQLFA 379
Query: 301 SSG-LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
D+ + + ++ + D
Sbjct: 380 RDNEADSLNCGSGADSAQVDAVDTVGQDGFQACESVD 416
>gi|254462833|ref|ZP_05076249.1| bifunctional hemolysin-adenylate cyclase (Cyclolysin)
(ACT)(AC-HLY) [Rhodobacterales bacterium HTCC2083]
gi|206679422|gb|EDZ43909.1| bifunctional hemolysin-adenylate cyclase (Cyclolysin) (ACT)(AC-HLY)
[Rhodobacteraceae bacterium HTCC2083]
Length = 938
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/305 (13%), Positives = 84/305 (27%), Gaps = 19/305 (6%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH---EIGHALGLMHPGSY 140
S + I AD + G G T + + G L
Sbjct: 549 SGGAGDDVHNGGGGEDLLIASAGADTFNGGAGIDTYDIDISDDYEADYGVNLATGVDNLG 608
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
N + V+ + +DS + D G ++ + + G
Sbjct: 609 NSYSGIENVNGGWGDDSLTGDAGINILDGGVGDDVVMGGAGDDSLAGGLVNDVLDGGDD- 667
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY--IDLNTESWSSIGGYEK 258
S + T G D D+ + IDL Y
Sbjct: 668 ---------NDVLFGSFGVDTYEGGAGVDTFDIGGSTAGEADYNIDLTVGQDQYGNTYSN 718
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + +++ G++ ++ + GN ++ ++GND +G +G D F A S Y
Sbjct: 719 IENVTTGSGDDNLFGNAADNQLQGNDGDDTIDGAAGNDFHNGGNGDDVFLANAGSNSYFG 778
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + + E + ++ + + + + L+ +
Sbjct: 779 GNGVDTLQIVGTTEDAVSYSINLAEGIDDQGNTNFGVENVNA----GSGNDRLVGNFDDN 834
Query: 379 VFESM 383
Sbjct: 835 ALYGG 839
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 59/520 (11%), Positives = 126/520 (24%), Gaps = 50/520 (9%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D + T + + DV+ G T+ ++
Sbjct: 323 ATDAGGTLTGTAGDDTLSGGAGTDVLNGLAGNDVFVASAGPDTVDGGAGADVYDINSSVL 382
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD----ASFGYCATPMVSDIVAV 191
N + S + T D V
Sbjct: 383 SVNDINVDLAEGNAGATTLLNVESVFGGSGANLLSGNAQDNLLSGGDGDDTLFGLDGDDV 442
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL--LDLTLIGGVKNYIDLNTES 249
+G + + + G+D ++ + + IDL +
Sbjct: 443 LIGGLGNDTHVG---AQGDDILIMNEGANFFVGGLGEDALVINSSTLESSAFAIDLAAGT 499
Query: 250 WSSIGGYEKNMTIAQHTVIES---------VVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
Y I ++ ++G +G+D + G +V +G+DV +G
Sbjct: 500 DQYGNTYNTIENIDGGLGDDNFAGTDDANVLIGRAGDDTLSGRLGGDVLSGGAGDDVHNG 559
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD--------------VERLRF 346
G D A + + + + +++++ D+ + +E +
Sbjct: 560 GGGEDLLIASAGADTFNGGAGIDTYDIDISDDYEADYGVNLATGVDNLGNSYSGIENVNG 619
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD------ 400
+IL+ + ++ G D + D+ F
Sbjct: 620 GWGDDSLTGDAGINILDGGVGDDVVMGGAGDDSLAGGLVNDVLDGGDDNDVLFGSFGVDT 679
Query: 401 -------SYLYLGSYDDLRNVFGSDRGAAARHYIT--HGVKEGRNPDAFKALEYIASHED 451
+G + D Y ++ L A+
Sbjct: 680 YEGGAGVDTFDIGGSTAGEADYNIDLTVGQDQYGNTYSNIENVTTGSGDDNLFGNAADNQ 739
Query: 452 LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD-DLRNVFGSDRGAAARHY 510
L D G D + ++ S Y G D + G+ A +
Sbjct: 740 LQGNDGDDTIDGAAGNDFHNGGNGDDVFLANAGSNSYFGGNGVDTLQIVGTTEDAVSYSI 799
Query: 511 ITHGVKEGRNPDAFKALEYIA--SHEDLINAFADAPDLVQ 548
+ + F A ++ L+ F D
Sbjct: 800 NLAEGIDDQGNTNFGVENVNAGSGNDRLVGNFDDNALYGG 839
Score = 54.4 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/234 (13%), Positives = 61/234 (26%), Gaps = 27/234 (11%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY-------------LYK 317
+V + + G + ++ +G DV +G +G D F A
Sbjct: 321 LVATDAGGTLTGTAGDDTLSGGAGTDVLNGLAGNDVFVASAGPDTVDGGAGADVYDINSS 380
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + + L +VE + Q ++L + L + G
Sbjct: 381 VLSVNDINVDLAEGNAGATTLLNVESVFGGSGANLLSGNAQDNLLSGGDGDDTLFGLDGD 440
Query: 378 DVFESMKHFYEFGLSEGRDITF-------------DSYLYLGSYDDLRNVFGSDRGAAAR 424
DV ++G DI + L + S + F D A
Sbjct: 441 DVLIGGLGNDTHVGAQGDDILIMNEGANFFVGGLGEDALVINSSTLESSAFAIDLAAGTD 500
Query: 425 HYITHGVK-EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
Y E + +++ A L + G +
Sbjct: 501 QYGNTYNTIENIDGGLGDDNFAGTDDANVLIGRAGDDTLSGRLGGDVLSGGAGD 554
>gi|194217260|ref|XP_001917946.1| PREDICTED: matrix metallopeptidase 28, partial [Equus caballus]
Length = 501
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 54/169 (31%), Gaps = 42/169 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 130 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDGPGGALAHA 189
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD+ + W +G L HEIGH LGL H P P Y
Sbjct: 190 FLPRRGEAHFDRDERWSLSRRRGRNLFVVLAHEIGHTLGLSHSPAPRALMAPYYKKLGRD 249
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+ D++AVQ +YG P+G
Sbjct: 250 ALLSWD---------------------------DVLAVQSLYGKPQGGS 271
>gi|171846809|gb|AAI61475.1| mmp1 protein [Xenopus (Silurana) tropicalis]
Length = 381
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 57/192 (29%), Gaps = 47/192 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + Y+ T D+ + + A WS V LTF + SDI+
Sbjct: 23 WQKTDLTYRIINFTPDLPQADV-------EAAIQRAFKVWSDVTPLTFTRIYNEVSDIEI 75
Query: 82 ISS-----NNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
S +N P + + +FD+ + W L A HE
Sbjct: 76 SFSAGDHKDNSPFDGPGGILAHAFQPGNGIGGDAHFDEDESWTKTSQLYN-LFLVAAHEF 134
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H S + Y + + DI
Sbjct: 135 GHSLGLSH--------------------STDPGALMYPSYSSTDPN-----AFQLPQDDI 169
Query: 189 VAVQKIYGAPKG 200
A+Q +YG
Sbjct: 170 NAIQYLYGKSSN 181
>gi|144899947|emb|CAM76811.1| HEMAGGLUTININ/HEMOLYSIN-RELATED PROTEIN [Magnetospirillum
gryphiswaldense MSR-1]
Length = 7354
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/267 (14%), Positives = 69/267 (25%), Gaps = 24/267 (8%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
Y ++ + G T + A + G + T
Sbjct: 1757 YAQRFNADGTLAGGRVLTGSTGNDSATITSH-FNLVDGGAGNDSFTTTAALATGGATFIG 1815
Query: 225 SGGDDLLD-LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G D + + I+ + G+ + E+V+G+
Sbjct: 1816 GSGTDQITITDAVSDTTGAINALHGIEKVVLGHSGSGGQTITLNAETVIGAIDASAATAG 1875
Query: 284 SANN--------VFFESSGNDVFDGS-SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
N SG D G G D + + Y+I + V
Sbjct: 1876 VILNAAARTNATTLTGGSGADTLTGGSGGADVAGFTGNAGDYRITNAAGTLSVAALGSGS 1935
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
D +S E LRF D + L+ G + F L++G
Sbjct: 1936 TDTVSGFETLRFNDGDLTVTGA-------------TLMGSAGANTLNVGSGFDYIALADG 1982
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGA 421
D + + + + G+D A
Sbjct: 1983 DDRLTATNVTVTGSTTINGGLGTDTLA 2009
Score = 41.3 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 8/163 (4%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
T + + GS G + + G + N+ F G+DV G G DT + +
Sbjct: 7192 TGDDFIQGSMGAEALAGGAGNDTLFSGGGSDVIFGQDGNDTIVLSDTDVHF-VDGGAGID 7250
Query: 326 IVYDANEHKQD-------FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + D + VE L + +++ E T + + + +
Sbjct: 7251 TLSWYSPGPLDLTALRDELIQRVEILDIGHASVTLTAADVQAMTEGTNGFTNTANTLVIN 7310
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
F + + G + T + Y D +V+ +
Sbjct: 7311 GNGGNVDFDDGAWTSGTNQTINGDSYAVYSKDGVSVYVEGTVS 7353
>gi|56681782|gb|AAW21427.1| leukotoxin A [Pasteurellaceae bacterium I9]
Length = 391
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 40/101 (39%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N I ++ + G + TI + + + G G+D++ G + ++ GND
Sbjct: 225 GTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGND 284
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G G D F + I + + ++ + +D
Sbjct: 285 LLHGGKGDDIFVHRKGDGNDIITDSDGNDKLSFSDSNLKDL 325
Score = 42.5 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 47/208 (22%), Gaps = 48/208 (23%)
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIV---------- 327
++ F SG DG G D Y +Y + V
Sbjct: 121 GEGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKAL 180
Query: 328 --------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+ A + +D L VE + K
Sbjct: 181 HEVTSTHTALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDA 240
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + G D K G D ++ G +DL + D
Sbjct: 241 FNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNG-----DDFIDGGKGNDLLHGGKGDDI- 294
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASH 449
H G + D L + S+
Sbjct: 295 -FVHRKGDGNDIITDSDGNDKLSFSDSN 321
>gi|256827826|ref|YP_003156554.1| hemolysin-type calcium-binding protein [Desulfomicrobium baculatum
DSM 4028]
gi|256577002|gb|ACU88138.1| Hemolysin-type calcium-binding region [Desulfomicrobium baculatum DSM
4028]
Length = 2336
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 5/156 (3%)
Query: 195 YGAPKGSLGNNIYK---IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
YG + Y + + T + D +L G + I L
Sbjct: 2095 YGEGDTGIDQFEYTMQDFDGDVSSASLYITSDEYREGDAGSNSLYGHEGDDILLGLGGTD 2154
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ G + N + + + G+ G D + G++ N+ +DV G SG D +
Sbjct: 2155 TLMGNDGNDVLHGGDGDDFLNGNKGEDQLYGDAGNDTIHGGMDDDVIYGGSGDDLIY--G 2212
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ E + A + ++ + L F
Sbjct: 2213 DKGDDTMSGGEGRDVFKYAGDALENTTNGDVILDFD 2248
Score = 41.7 bits (96), Expect = 0.37, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 33/128 (25%), Gaps = 9/128 (7%)
Query: 299 DGSSGLDTFFY-----YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS 353
+G +G+D F Y +Y + DA + + L
Sbjct: 2097 EGDTGIDQFEYTMQDFDGDVSSASLYITSDEYREGDAGSNSLYGHEGDDILLGLGGTDTL 2156
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYD 409
+ +L + L G+D D+ + D +Y D
Sbjct: 2157 MGNDGNDVLHGGDGDDFLNGNKGEDQLYGDAGNDTIHGGMDDDVIYGGSGDDLIYGDKGD 2216
Query: 410 DLRNVFGS 417
D +
Sbjct: 2217 DTMSGGEG 2224
>gi|72382584|ref|YP_291939.1| hypothetical protein PMN2A_0745 [Prochlorococcus marinus str.
NATL2A]
gi|72002434|gb|AAZ58236.1| hypothetical protein PMN2A_0745 [Prochlorococcus marinus str.
NATL2A]
Length = 615
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 55/159 (34%), Gaps = 14/159 (8%)
Query: 196 GAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G + G Y+ E + + D+ D L G+ N I E ++
Sbjct: 124 GVEEVITGTFDYEKIGESLSSQRTYYISGDDTFNGSKKDDKLYSGLGNDIIYGNEGNDTL 183
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + I +++ G +GN + + GND DG SG D Y
Sbjct: 184 KGESGSDIIKGGDGFDNIYGGTGN---------DSLHGNDGNDYIDGGSGTDVANYEGNF 234
Query: 314 YLYKIYRFENAIIVYD---ANEHKQDFLSDVERLRFADQ 349
Y + + + V D + D L +E L F D+
Sbjct: 235 SDYSFVQDGSNLKVIDNRIGKDKWTDTLVSIELLDFLDK 273
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 51/190 (26%), Gaps = 17/190 (8%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND---VVIGNSANNVFFESSGNDVF--- 298
L S N+ + V + + + N + F
Sbjct: 44 LANGKISYYISGNYNLDLDYKNVKYNEQTGTISYNGYTFELKQYGNHIGTGEADGYFVEN 103
Query: 299 ------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCI 351
G D +Y I + + ++ + + ++S + + +
Sbjct: 104 LYDLSTIGYLNKDKTYYSETGVEEVITGTFDYEKIGESLSSQRTYYISGDDTFNGSKKDD 163
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----TFDSYLYLGS 407
+ I+ + L G D+ + F G D + Y+ GS
Sbjct: 164 KLYSGLGNDIIYGNEGNDTLKGESGSDIIKGGDGFDNIYGGTGNDSLHGNDGNDYIDGGS 223
Query: 408 YDDLRNVFGS 417
D+ N G+
Sbjct: 224 GTDVANYEGN 233
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 33/117 (28%), Gaps = 28/117 (23%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SG+D G+ ++ + GND+ G+ G DT E
Sbjct: 151 SGDDTFNGSKKDDKLYSGLGNDIIYGNEGNDTL----------------------KGESG 188
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D + D + L + + G DV +F ++
Sbjct: 189 SDIIKG------GDGFDNIYGGTGNDSLHGNDGNDYIDGGSGTDVANYEGNFSDYSF 239
>gi|74199114|dbj|BAE33104.1| unnamed protein product [Mus musculus]
Length = 472
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 61/198 (30%), Gaps = 53/198 (26%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ R A WS V L F +
Sbjct: 110 RTLKWSQTNLTYRIVNYTPDMSHSEV-------EKAFRKAFKVWSDVTPLNFTRIYDGTA 162
Query: 78 DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + P Y + +FD + W KG L
Sbjct: 163 DIMISFGTKEHGDFYPFDGPSGLLAHAFPP--GPNYGGDAHFDDDETWT-SSSKGYNLFI 219
Query: 123 NALHEIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A HE+GH+LGL H +P+Y + S+FM D
Sbjct: 220 VAAHELGHSLGLDHSKDPGALMFPIYT-----------YTGKSHFMLPD----------- 257
Query: 182 TPMVSDIVAVQKIYGAPK 199
D+ +Q +YG
Sbjct: 258 ----DDVQGIQFLYGPGD 271
>gi|332304956|ref|YP_004432807.1| peptidase M10A and M12B matrixin and adamalysin [Glaciecola
agarilytica 4H-3-7+YE-5]
gi|332172285|gb|AEE21539.1| peptidase M10A and M12B matrixin and adamalysin [Glaciecola
agarilytica 4H-3-7+YE-5]
Length = 353
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 5/128 (3%)
Query: 49 PNAQEVARWALGEWSKV-VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKA 107
N + R A EW + + L F E + S+ +F + +
Sbjct: 62 ENQLQAVRDAFKEWKALGIGLDFIEVARASEAEFRIGFTAGSSWSYVGRDCIDLVPNPQE 121
Query: 108 DVWRYGIGKGT-ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
+G T ALHEIGHALG H + V+ D Y N + +Y+
Sbjct: 122 QTMNFGWDLTTPYGRDTALHEIGHALGFPHEHQNHKAGIVWDEDAVYAN---FAAYPNYW 178
Query: 167 MPQDSMMD 174
+ +
Sbjct: 179 DQATTYHN 186
>gi|4126377|dbj|BAA36551.1| Membrane-type matrix metalloproteinase-1 [Capra hircus]
Length = 582
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 113 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 165
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 166 IREGHEKQADVMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 225
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 226 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 267
>gi|296483589|gb|DAA25704.1| matrix metalloproteinase-14 precursor [Bos taurus]
Length = 582
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 113 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 165
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 166 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 225
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 226 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 267
>gi|163735930|ref|ZP_02143357.1| iron-regulated protein FrpC, putative [Roseobacter litoralis Och
149]
gi|161390747|gb|EDQ15089.1| iron-regulated protein FrpC, putative [Roseobacter litoralis Och
149]
Length = 1009
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/407 (12%), Positives = 101/407 (24%), Gaps = 53/407 (13%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I G+D + G + I+ ++ + TI
Sbjct: 503 GNTTITGTVGANVITTGSGNDTV---NAGAGNDTINTGAG-NDTVEASSGSDTIFLGDGN 558
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGN-DVFDGSSGLDTFFYYAPSYLYKI--------- 318
++ SSG D + G + +++ F G + DG +G+DT + Y +
Sbjct: 559 DTA-TSSGTDTIFGEAGDDLIFAGLGLPETLDGGTGVDTLNTTLFNGSYVVNLATGLTNF 617
Query: 319 ------------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
N ++ ++ ++ D + +R+ + + IL
Sbjct: 618 AGEVFTNFENIISGSGNDELLGTSSANEMDGGAGNDRILGLGGNDELIGGLGSDILNGGD 677
Query: 367 SYEDLIQVIGQDVFESM------------------KHFYEFGLSEGRDITFDSYLYLGSY 408
+++ G D+ G D+
Sbjct: 678 GNDEIDGGDGNDIMYGGTGNDDMEGGDGDDLLIGNDGNDMMEGGLGNDVFRGGTGVDIID 737
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
D + G +++ ++ L+ + G D
Sbjct: 738 GDEGDDEAFGGDGNDVLRGGDGNDLMDGSAGDDSIQGGDGNDILVGQIGNDILQGDSGAD 797
Query: 469 HF--SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR----HYITHGVKEGRNPD 522
D+ + D L G D + + G D
Sbjct: 798 ELRGGGGDDLLNGGTGNDTLFGGANEDTLLGGSGDDFLQGNQQDDELFGQSGNDRLFGGD 857
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
F L + L + G D G G + F+
Sbjct: 858 GFDFLNGGIGDDRLEGNNGRDTLVGGTGAD--ILIGGALGDTFVFSS 902
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 65/422 (15%), Positives = 108/422 (25%), Gaps = 36/422 (8%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
F S + A+ G G IL E+ LG
Sbjct: 612 TGLTNFAGEVFTNFENIISGSGNDELLGTSSANEMDGGAGNDRILGLGGNDELIGGLG-- 669
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
NGG +D ND + M D G M+ +
Sbjct: 670 -SDILNGGDGNDEIDGGDGNDIMYGGTGNDDMEGGDGDDLLIGNDGNDMMEGGLGNDVFR 728
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G G + + + + + G+DL+D + SI G
Sbjct: 729 GG-TGVDIIDGDEGDDEAFGGDGNDVLRGGDGNDLMD-------------GSAGDDSIQG 774
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ N + + + G SG D + G +++ +GND G + DT S
Sbjct: 775 GDGNDILVGQIGNDILQGDSGADELRGGGGDDLLNGGTGNDTLFGGANEDTLL--GGSGD 832
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ + ++ + + RL D LE + L+
Sbjct: 833 DFLQGNQQDDELFGQSGND--------RLFGGDGFDFLNGGIGDDRLEGNNGRDTLVGGT 884
Query: 376 GQDVFESMKHFYEFGLSE-------GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
G D+ F S RD + D+ +V D
Sbjct: 885 GADILIGGALGDTFVFSSVADSNLASRDTIVGIDGIGVANGDIIDVSAIDADTTVGGNQA 944
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+ AL + A + NA + D F + + Y
Sbjct: 945 FTFLGLQ--TTASALSFGAGALWVENAGGPTLLFGNIDNDATIEFAVQINDGAGTSAADY 1002
Query: 489 LG 490
Sbjct: 1003 TL 1004
>gi|254440132|ref|ZP_05053626.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
gi|198255578|gb|EDY79892.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
Length = 1044
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 67/226 (29%), Gaps = 17/226 (7%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
D + V + + +++ + GG D + NYID
Sbjct: 120 DWLVVDYSWATVAITGTATSFEVAGNSITYSSFEHFKVLGGT-AADQITLSSGNNYIDAG 178
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
+ S G N+ I +S+ +GN+ + N +GN++ DT
Sbjct: 179 EGANSISAGNGDNV-IKTGATADSITVGAGNNSIFAGGGVNTIITGAGNNLVSTGDAADT 237
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHK-------------QDFLSDVERLRFADQCIDS 353
I A V A H + L+ E +
Sbjct: 238 V--TTGGGNDIIKDTGGAGTVTAAAGHDRLILDYSELTAAVTNTLTGAEPSYGGIIAGTT 295
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + +++ ++++ G DV + G D+ +
Sbjct: 296 FSGVEEFHVTGSSNNDNILTGAGSDVLDGGAGADTLTSGGGSDVIY 341
Score = 44.0 bits (102), Expect = 0.093, Method: Composition-based stats.
Identities = 47/352 (13%), Positives = 83/352 (23%), Gaps = 50/352 (14%)
Query: 196 GAPKGSLGN-----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G S G+ KD+ T+ + G D L L + T +
Sbjct: 225 GNNLVSTGDAADTVTTGGGNDIIKDTGGAGTVTAAAGHDRLILDYSELTAAVTNTLTGAE 284
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY- 309
S GG T + V GSS ND ++ + ++V +G D G D +
Sbjct: 285 PSYGGIIAGTTFS-GVEEFHVTGSSNNDNILTGAGSDVLDGGAGADTLTSGGGSDVIYGG 343
Query: 310 --------------------------------YAPSYLYKIYRFENAIIVYDANEHKQDF 337
YA + + D E
Sbjct: 344 VGDVVDGGEDDGTDLNDFDVLVLNDFGDYRIDYATVDGDVDTESGIVVQLADGIETGSVE 403
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYT--ASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+ +E + F + V + + L + + + +EG
Sbjct: 404 FTGIESIEF---TNNIVTTSENTQLVGNLPLTADTTVTTFAMGNITGDAG-SAVSRTEGV 459
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
Y+ + A +Y + A+ +
Sbjct: 460 LEIEADGSYI-----FTPASNYNGPAPVINYTDSDGVISSLRINVSPADESATLDTTAPD 514
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
D + G G+ + D + D G A
Sbjct: 515 APTVSIAEDTDNDGLISGGESSGQVDVTIALPAGAVAGDRLTITNPDTGTTA 566
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 40/348 (11%), Positives = 84/348 (24%), Gaps = 43/348 (12%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
Y S TI ++L L GVK+++ L + + ++ +
Sbjct: 32 YYGPEDVNVSVSGITITGPATATGINLFLEAGVKDFVLLGEAPINVTDTPKDTTSLNESN 91
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
++ G+ G++ + +V G G D I +
Sbjct: 92 ---NISGNDGDNTITLTGGIDVVDGGDG-------PGTDWLVVDYSWATVAITGTATSFE 141
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVK--QRSILEYTASYEDLIQVIGQDVFESMK 384
V + S E + + ++ + G +V ++
Sbjct: 142 VAGNS----ITYSSFEHFKVLGGTAADQITLSSGNNYIDAGEGANSISAGNGDNVIKTGA 197
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ G + F G + + G++ + DA +
Sbjct: 198 TADSITVGAGNNSIFA----GGGVNTIITGAGNNLVS--------------TGDAADTVT 239
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
++ + + G D E VT SY +
Sbjct: 240 TGGGNDIIKDTGGAGTVTAAAGHDRLILDYSELTAAVTNTLTGAEPSYGGIIA---GTTF 296
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ + G + A + L G D
Sbjct: 297 SGVEEFHVTG------SSNNDNILTGAGSDVLDGGAGADTLTSGGGSD 338
>gi|114652045|ref|XP_001157623.1| PREDICTED: matrix metalloproteinase 14 isoform 3 [Pan troglodytes]
Length = 600
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATYEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 167 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|319637699|ref|ZP_07992465.1| hypothetical protein HMPREF0604_00088 [Neisseria mucosa C102]
gi|317400854|gb|EFV81509.1| hypothetical protein HMPREF0604_00088 [Neisseria mucosa C102]
Length = 912
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 45/312 (14%), Positives = 95/312 (30%), Gaps = 35/312 (11%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT-IYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+++ G + Y ++ T + G++ ++ +N ++
Sbjct: 307 IEQAGGGEDTVFSSISYTAATHVENVTLTGTANIFAAGNNSNNILTGNEGRNRLNSGRG- 365
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+I G N + + + G GND + G++ ++V +G D+ G +G DT+ Y
Sbjct: 366 DDTIYGMGGNDNLNGGDGNDYLDGGDGNDAINGDAGDDVLVGGNGKDILKGGAGNDTYIY 425
Query: 310 Y-------------------------------APSYLYKIYRFENAIIVYDANEHKQDFL 338
N+ D
Sbjct: 426 GDNDTIIDNQGINTLKFSDGLNNAKLNLKTIHNDDGSQSWEITSEQGSALIQNQIGADGS 485
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF-GLSEGRDI 397
++R +F DQ + +Q A + G D E G ++GRDI
Sbjct: 486 VSIDRFQFNDQTYTAAQFQQAFQ-ALKAETIKFVGTNGDDTLHGDAGNNEIDGGNDGRDI 544
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
+ + +G++ + + Y +G + L+ A ++ L
Sbjct: 545 LYGHDGDDILREHSETYYGNEPASDDKLYGGNGNDKLYAHVGADLLDGGAGNDYLEGGEH 604
Query: 458 DAPDLVQVGKDH 469
+ + G H
Sbjct: 605 NDTYVFGKGYGH 616
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/378 (13%), Positives = 101/378 (26%), Gaps = 85/378 (22%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
++ G N I + E + + + + + + G GND + G + N+
Sbjct: 80 TANIFGAGNNSNNILIGNEGRNRLNSGRGDDIVHGGGGNDFINGGEGNDRLFGETGNDTL 139
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---------------AIIVYDANEHK 334
+GND+ +G G DT+ + A S I + + V +
Sbjct: 140 NGEAGNDMLEGGEGDDTYLFSAKSEQDTIIDDQGHNSIRFHTDLSLNDLTVEVRNNETGG 199
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRS---------------------------------- 360
QD+L V+ + +
Sbjct: 200 QDWLIAVKNSNAVLTIKNQYTQNGTTPAVSQFIIGTQKLDVNSFAKYFNISLTEHTESGR 259
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR---NVFGS 417
++ + + LI G D+ + +G D Y+ + D+ G
Sbjct: 260 TIDGSDGNDHLIGTSGDDIIDGKAGADIMEGGDGNDT-----YYVDNAKDVVIEQAGGGE 314
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D ++ Y E + ++ + I + + + G+
Sbjct: 315 DTVFSSISYTAATHVENVTLTGTANIFAAGNNSNNILTGNEGRNRLNSGRG--------- 365
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
D +Y +D N G D A+ A + L+
Sbjct: 366 ------DDTIYGMGGNDNLN-------------GGDGNDYLDGGDGNDAINGDAGDDVLV 406
Query: 538 NAFADAPDLVQAGKDHFS 555
AG D +
Sbjct: 407 GGNGKDILKGGAGNDTYI 424
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/250 (12%), Positives = 74/250 (29%), Gaps = 9/250 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH---NALHEIGHAL 132
D D+ + + + D+ + G G T + + G
Sbjct: 380 GGDGNDYLDGGDGNDAINGDAGDDVLVGGNGKDILKGGAGNDTYIYGDNDTIIDNQGINT 439
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G N + + ND + S+ + + + A + Q
Sbjct: 440 LKFSDGLNNAKLNLKTIHNDDGSQSWEITSEQGSALIQNQIGADGSVSIDRFQFND---Q 496
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
A + ++ + T++ G++ +D G I +
Sbjct: 497 TYTAAQFQQAFQALKAETIKFVGTNGDDTLHGDAGNNEID---GGNDGRDILYGHDGDDI 553
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ + + + + + G +GND + + ++ +GND +G DT+ +
Sbjct: 554 LREHSETYYGNEPASDDKLYGGNGNDKLYAHVGADLLDGGAGNDYLEGGEHNDTYVFGKG 613
Query: 313 SYLYKIYRFE 322
I+ +
Sbjct: 614 YGHDTIFDYN 623
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 46/387 (11%), Positives = 90/387 (23%), Gaps = 61/387 (15%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
FI+ G ++ D+ G G T L
Sbjct: 112 VHGGGGNDFINGGEGNDRL-FGETGNDTLNGEAGNDMLEGGEGDDTYLFSA--------- 161
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
+ + + S + + D + V I
Sbjct: 162 --KSEQDTIIDDQGHNSIRFHTDLSLNDLTVEVRNNETGGQDWLIAVKNSNAVLTIK--- 216
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ + + + + + + + LT ID +
Sbjct: 217 -----NQYTQNGTTPAVSQFIIGTQKLDVNSFAKYFN-ISLTEHTESGRTIDGSDG---- 266
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ ++G+SG+D++ +G D+ +G G DT++
Sbjct: 267 ---------------NDHLIGTSGDDII---------DGKAGADIMEGGDGNDTYYVDNA 302
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDL 371
+ + + VE + I + +IL L
Sbjct: 303 K--DVVIEQAGGGEDTVFSSISYTAATHVENVTLTGTANIFAAGNNSNNILTGNEGRNRL 360
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G D M +G D YL G +D N D +G
Sbjct: 361 NSGRGDDTIYGMGGNDNLNGGDGND-----YLDGGDGNDAINGDAGDDVLV----GGNGK 411
Query: 432 KEGRNPDAFKALEYIASHEDLINAFAD 458
+ Y + + N +
Sbjct: 412 DILKGGAGNDTYIYGDNDTIIDNQGIN 438
>gi|332208831|ref|XP_003253514.1| PREDICTED: LOW QUALITY PROTEIN: neutrophil collagenase-like
[Nomascus leucogenys]
Length = 517
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 49/184 (26%), Gaps = 30/184 (16%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + ++ T D+ + A WS LTF S +DI
Sbjct: 158 WEQTHLTHRIRNYTPQLSKADV-------ERAIEKAFKVWSDASPLTFTRISQGEADINI 210
Query: 82 IS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+N P + +FD + W L A HE
Sbjct: 211 AFFQRDHGDNSPFDGPNGILAHAFRXGQGIGGDAHFDAEETWTK-TSTNYNLFLVAAHEF 269
Query: 129 GHALGLMHPGS-YNGGYPVYGVDNDYEN----DSFLTSVMSYFMPQDSMMDASFGYCATP 183
GH+LGL H YP Y D Y + + +TP
Sbjct: 270 GHSLGLAHSSDPGALMYPNYAFRETSTYSLPQDDIDGIQAIYGPSSNPIQPTG---PSTP 326
Query: 184 MVSD 187
D
Sbjct: 327 KPCD 330
>gi|327291129|ref|XP_003230274.1| PREDICTED: matrix metalloproteinase-15-like, partial [Anolis
carolinensis]
Length = 404
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 46/149 (30%), Gaps = 26/149 (17%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L + W+ + + T +QE R A W + L+F E S
Sbjct: 124 LTGRRWTQSQLTFSIQNHTEKLG-------RSASQEAIRRAFRVWEEATPLSFREVSFSG 176
Query: 78 ---DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
D+ + ++ + P + D+ G G
Sbjct: 177 TEADLVVLFASGFHGDSSPFDGAGGFLAHAFFPGPGMGGDAHFDLDEPWTLENVDGAGNN 236
Query: 120 LSHNALHEIGHALGLMH-PGSYNGGYPVY 147
L A+HE+GH+LGL H P Y
Sbjct: 237 LFLVAVHELGHSLGLEHSSHPSAIMAPFY 265
>gi|172039245|ref|YP_001805746.1| hemolysin-type calcium-binding protein [Cyanothece sp. ATCC 51142]
gi|171700699|gb|ACB53680.1| hemolysin-type calcium-binding protein [Cyanothece sp. ATCC 51142]
Length = 384
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 87/283 (30%), Gaps = 14/283 (4%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+ + + I G + TIA + +S++G SG+D + G + N+ GND DG SGL
Sbjct: 19 IGSSNDDVINGSLFSDTIAGNAGNDSLIGGSGDDRLYGGNDNDTLQGGRGNDYLDGGSGL 78
Query: 305 DT------FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
D + + + +++ A+ + + ++ F+ +
Sbjct: 79 DIVKELADVDFELNNSRLIGLGTDVIVLIEGAHLIGGESDNTIDAGGFSLGSVTLEGEGG 138
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD----SYLYLGSYDD---L 411
L + LI G D G D L G D
Sbjct: 139 NDRLYGGQLDDLLIGGEGNDTMSGNPGSDHLLGENGNDRLLGRSGQDTLEGGDGSDHLYG 198
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH-EDLINAFADAPDLVQVGKDHF 470
+ G Y+ G F + + ++ +D ++ ++ L +
Sbjct: 199 GSGDDGLLGGFGDDYLNGGYDNDTLVGGFGSDTLLGNYGDDFLHGGGNSDILEGQDGNDT 258
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
+ L G D+ + D + Y +
Sbjct: 259 LRGAQNYWDSLGTIDTLTGGQGRDIFILGVDDEVSFGNLYDDY 301
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/201 (11%), Positives = 54/201 (26%), Gaps = 29/201 (14%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
+ D+ +D ++ + G + + + +++ G+ G+D +
Sbjct: 111 HLIGGESDNTIDAGGFSLGSVTLE-GEGGNDRLYGGQLDDLLIGGEGNDTMSGNPGSDHL 169
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G + N+ SG D +G G D + + ++ +
Sbjct: 170 LGENGNDRLLGRSGQDTLEGGDGSDHLYGGSGDDGLLGGFGDDYLN-------------- 215
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
L + L+ G D + +G D
Sbjct: 216 --------------GGYDNDTLVGGFGSDTLLGNYGDDFLHGGGNSDILEGQDGNDTLRG 261
Query: 401 SYLYLGSYDDLRNVFGSDRGA 421
+ Y S + + G
Sbjct: 262 AQNYWDSLGTIDTLTGGQGRD 282
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 83/293 (28%), Gaps = 21/293 (7%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ + + T ++ I D G T+ + GL
Sbjct: 28 NGSLFSDTIAGNAGNDSLIGGSGDDRLYGGNDNDTLQGGRGNDYLDGGSGLDIVKELADV 87
Query: 144 YPVYGVDNDYENDSFLTSVMSY----FMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
+ + ++ D+ +DA + + ++YG
Sbjct: 88 DFELNNSRLIGLGTDVIVLIEGAHLIGGESDNTIDAGGFSLGSVTLEGEGGNDRLYGGQL 147
Query: 200 GSL-----GNNIYKIEVQQK---DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
L GN+ + G D L+ GG +
Sbjct: 148 DDLLIGGEGNDTMSGNPGSDHLLGENGNDRLLGRSGQDTLE----GGDGSDHLYGGSGDD 203
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---- 307
+ G + + +++VG G+D ++GN ++ +D+ +G G DT
Sbjct: 204 GLLGGFGDDYLNGGYDNDTLVGGFGSDTLLGNYGDDFLHGGGNSDILEGQDGNDTLRGAQ 263
Query: 308 -FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
++ + + + + I + + F + + + + + +
Sbjct: 264 NYWDSLGTIDTLTGGQGRDIFILGVDDEVSFGNLYDDYLYPGRAYNDYALITD 316
Score = 44.4 bits (103), Expect = 0.062, Method: Composition-based stats.
Identities = 35/271 (12%), Positives = 60/271 (22%), Gaps = 26/271 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ S F TI + G+D L + + G N T+
Sbjct: 22 SNDDVINGSLFSDTIAGNAGNDSL-------------IGGSGDDRLYGGNDNDTLQGGRG 68
Query: 268 IESVVGSSGNDVV-----IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G SG D+V + NN G DV G S
Sbjct: 69 NDYLDGGSGLDIVKELADVDFELNNSRLIGLGTDVIVLIEGA--HLIGGESDNTIDAGGF 126
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ V E D L + + + + + L+ G D
Sbjct: 127 SLGSVTLEGEGGNDRLYGGQL------DDLLIGGEGNDTMSGNPGSDHLLGENGNDRLLG 180
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+G D + G + + + G
Sbjct: 181 RSGQDTLEGGDGSDHLYGGSGDDGLLGGFGDDYLNGGYDNDTLVGGFGSDTLLGNYGDDF 240
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
L + + L +
Sbjct: 241 LHGGGNSDILEGQDGNDTLRGAQNYWDSLGT 271
>gi|284052236|ref|ZP_06382446.1| hemolysin-type calcium-binding region [Arthrospira platensis str.
Paraca]
Length = 285
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 47/148 (31%), Gaps = 7/148 (4%)
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GND + G ++ GND+ G G D F ++ +Y +
Sbjct: 1 GNDTIYGGGGDDCLRGGQGNDLIFGEGGNDLLF--GDKDADTLFAVSGNNTMYGGQGNDS 58
Query: 336 DFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ + L F D V + L A + L G D+ E +G
Sbjct: 59 LIGGENDDLMFGDKGNDTLVAGGGNNTLYGGADNDFLFGGTGNDLLFGDDGNDELVGGKG 118
Query: 395 RDITF----DSYLYLGSYDDLRNVFGSD 418
D F D ++ G +D+ +
Sbjct: 119 NDTIFGGPGDDIIFGGDGNDILRGGKGN 146
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 50/158 (31%), Gaps = 8/158 (5%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+I G + + + + G GND++ G+ + F SGN+ G G D+
Sbjct: 1 GNDTIYGGGGDDCLRGGQGNDLIFGEGGNDLLFGDKDADTLFAVSGNNTMYGGQGNDSLI 60
Query: 309 -------YYAPSYLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRS 360
+ + +Y ++ F + + L D + V K
Sbjct: 61 GGENDDLMFGDKGNDTLVAGGGNNTLYGGADNDFLFGGTGNDLLFGDDGNDELVGGKGND 120
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + + G D+ K EG D+
Sbjct: 121 TIFGGPGDDIIFGGDGNDILRGGKGNDRIFGDEGNDLL 158
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 41/134 (30%), Gaps = 4/134 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
++ G+DLL G N + + +I G + I
Sbjct: 81 GGNNTLYGGADNDFLFGGTGNDLL----FGDDGNDELVGGKGNDTIFGGPGDDIIFGGDG 136
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G GND + G+ N++ G D G G + F +
Sbjct: 137 NDILRGGKGNDRIFGDEGNDLLEGGRGVDTLTGGGGRNIFVVGLIVSASEGGGSVITATT 196
Query: 328 YDANEHKQDFLSDV 341
A+ D ++D
Sbjct: 197 GGASPELADLITDF 210
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 48/138 (34%), Gaps = 9/138 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
T++ G++ + + +LIGG + + + ++ N T+
Sbjct: 27 GGNDLLFGDKDADTLFAVSGNNTMYGGQGNDSLIGGENDDLMFGDKGNDTLVAGGGNNTL 86
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G +GND++ G+ N+ GND G G D F + +
Sbjct: 87 YGGADNDFLFGGTGNDLLFGDDGNDELVGGKGNDTIFGGPGDDIIF--GGDGNDILRGGK 144
Query: 323 NAIIVYDANEHKQDFLSD 340
++ + D L
Sbjct: 145 GNDRIF--GDEGNDLLEG 160
>gi|126729791|ref|ZP_01745604.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Sagittula stellata E-37]
gi|126709910|gb|EBA08963.1| rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
[Sagittula stellata E-37]
Length = 3816
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/159 (13%), Positives = 46/159 (28%), Gaps = 1/159 (0%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ ++ G + +++ G+ G+D + G + + +G D G G D
Sbjct: 1141 GSGFDDTLTGDANDNEFFGLVGNDTLFGAEGSDTLWGGTGADSLDGGAGVDTLVGGDGDD 1200
Query: 306 TFFYYAPSYLYKIYRFE-NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
T+ + + + VE + ++L
Sbjct: 1201 TYVVDNALEQVTELGTGTDLVEAWVDWTLDTPSQQQVENMSLFGDARVGTGNALDNVLTG 1260
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
T + L + G D + + D+ DS
Sbjct: 1261 TDGNDRLNGLAGADTLNGGNGDDTYVVDNALDLVQDSDG 1299
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/458 (10%), Positives = 94/458 (20%), Gaps = 36/458 (7%)
Query: 67 DLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
DLT E S+ S + DV G T+
Sbjct: 836 DLTSIEVLQGSNHDDTLSGSSANEMFIGLVGNDEVFGAGGDDVLLGSEGDDTLDGGEGAD 895
Query: 127 EIGHALG-----------LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
+ A G ++ Y D + S+ +
Sbjct: 896 IMVGATGNDIYYVDDTGDVVDEDRYGEIGTGGDGGVDEVRAAISWSIAAGTQASQIENLT 955
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL 235
G + +D V S + + G D +
Sbjct: 956 LIGAAISGTGNDKANVLTANQLGLEGGSLFGGGGNDTLIGSEAGEYMDGQAGADSMTGFG 1015
Query: 236 IGG-------VKNYIDLNTESWSSIGGYEKNMTIAQHTVIE-----------SVVGSSGN 277
I++ + +N + IE + G+ +
Sbjct: 1016 GDDQYVVDHVDDEVIEVAGGGNDVLHSKLQNFALDAFQDIEVLLVDLSVTDGDLTGNQLD 1075
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G ++ G D F G G D Y + + I + E + D
Sbjct: 1076 QTLFGALGDDTLEGKGGADAFIGGQGRDRVTYRSSAAAVAIDLT---LATQAGGESEGDS 1132
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ +E + + + + L G D G D
Sbjct: 1133 YNSIEEIEGSGFDDTLTGDANDNEFFGLVGNDTLFGAEGSDTLWGGTGADSLDGGAGVDT 1192
Query: 398 TF---DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
Y+ + ++ + + + +
Sbjct: 1193 LVGGDGDDTYVVDNALEQVTELGTGTDLVEAWV-DWTLDTPSQQQVENMSLFGDARVGTG 1251
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
D G D + + Y+
Sbjct: 1252 NALDNVLTGTDGNDRLNGLAGADTLNGGNGDDTYVVDN 1289
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 58/165 (35%), Gaps = 6/165 (3%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
SI G + + +A +++ G G D + G ++V G+D+F G +G DT
Sbjct: 745 SIAGGDGDDMLAGGAAADTLDGGDGVDTLFGRDGDDVLLGGLGDDLFYGGAGGDTIDGGG 804
Query: 312 PSYLYKIYRFENAIIV------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ A+ V E + D L+ +E L+ ++ +
Sbjct: 805 GEDMVTYVLSGAAVNVDLTAGTGTGGEAEGDDLTSIEVLQGSNHDDTLSGSSANEMFIGL 864
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
+++ G DV + EG DI + Y D
Sbjct: 865 VGNDEVFGAGGDDVLLGSEGDDTLDGGEGADIMVGATGNDIYYVD 909
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 71/282 (25%), Gaps = 7/282 (2%)
Query: 71 EETSIHSDIKFISSNNGYVCT-PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI- 128
E + D + + + R+D + D V G + E
Sbjct: 2839 VEGADKGDTVLLGTGQDWASLDLRFDPATETDPVEDITIVLADLQGTEAVFFAGTADETR 2898
Query: 129 ---GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
L L + + + + + G
Sbjct: 2899 LEGAEQLWLYTGAGNDTFDARGVYSHTNTTGKYNYFLSDAGDDSFATDLNYVGSAYFYAG 2958
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ + A + D+ L GG + +
Sbjct: 2959 EGTDTLTMDWSAATNGISRGTTSGGTPYYRVVHASDYRYMYYTDVERFDLTGGNSSDDLV 3018
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
++ G + T+ + +G +GND + N+ +GND GS+G D
Sbjct: 3019 GAALNDTLSGGAGHDTLTAGDGDDLALGGAGNDRIQLGLGNDTATGGAGNDSIYGSTGGD 3078
Query: 306 --TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
Y + ++ + D L +++ LR
Sbjct: 3079 LNVATYADDASGIYVFDLGGGVFEVRTATEGTDRLENIQVLR 3120
Score = 42.9 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 59/442 (13%), Positives = 116/442 (26%), Gaps = 58/442 (13%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G++ Y ++ + T G D L + G +++ S+ + +
Sbjct: 2746 GDDAYLTDLNAIGNA---TFAAGAGYDRLTIDWSGAYSAVTNMSATSYRTHISGYDYIYQ 2802
Query: 263 AQHTVIE-SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
V E + +GND ++ + F +G+D +G+ DT +
Sbjct: 2803 YFSDVEELDIRSGAGNDNLVALGGRDRFETGAGHDRVEGADKGDTVLLGTGQDWASLD-- 2860
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + D + D+ + Q ++V + E L
Sbjct: 2861 -----LRFDPATETDPVEDITIVLADLQGTEAVFFAGTADETRLEGAEQL---------- 2905
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+LY G+ +D + G + + + +
Sbjct: 2906 --------------------WLYTGAGNDTFDARGVYSHTNTTGKYNYFLSDAGDDSFAT 2945
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
L Y+ S D + + + G G Y +
Sbjct: 2946 DLNYVGSAYFYAGEGTDTLTMDWSAATNGISRGTTSGGTP-----YYRVVHASDYRYMYY 3000
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD-------HF 554
+ + L A H+ L D L AG D +
Sbjct: 3001 TDVERFDLTGGNSSDDLVGAALNDTLSGGAGHDTLTAGDGDDLALGGAGNDRIQLGLGND 3060
Query: 555 SNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKS 614
+ G SI + L + D S + G+ E R + ++
Sbjct: 3061 TATGGAGNDSIYGSTGGDLN-----VATYADDASGIYVFDLGGGVFEVRTATEGTDRLEN 3115
Query: 615 VMNLSEKSRDKADLSLSFDHKK 636
+ L + A L D
Sbjct: 3116 IQVLRIGTNGTATDHLIADLVN 3137
Score = 41.7 bits (96), Expect = 0.38, Method: Composition-based stats.
Identities = 63/466 (13%), Positives = 114/466 (24%), Gaps = 24/466 (5%)
Query: 13 IADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE 72
L + ++ L D+ EL A V DLT +
Sbjct: 1271 AGADTLNGGNGDDTYVVDNALDLVQDSDGHDLIELLSAGTNTFDMAAQAPG-VEDLTVTD 1329
Query: 73 ----TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+I + + + NGY T I G L
Sbjct: 1330 NARAVTITGNALDNVITGNGYGDTISGGLGNDTIIAGAGGSEHLSGDEGDDDLRMTLASR 1389
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
H + + + + TS ++ A F + +
Sbjct: 1390 GTHYIHGGDGAADIMRMDWSTATSAITYNETSTSTYYRVYQNNAYTYAYFDGIESFDLRG 1449
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+YGA + + G DL+ TL+ + L+
Sbjct: 1450 GTGGDSLYGAALDDTLHGGAG-HDRLYAYAGAVDASGGSGHDLVVSTLLTAAGADLGLDF 1508
Query: 248 ESWSSIGGYEKNMTIAQHTVIE---------SVVGSSGNDVVIGNSANNVFFESSGNDVF 298
E I +T T IE + +GND++ + S ++ F
Sbjct: 1509 E-LRLIDTQAGTVTTNAGTAIESHWEGIEQIRLTTGAGNDLLDTRGVASYSTYFSTSNRF 1567
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
D +G DT+ + + + D + +
Sbjct: 1568 DAGAGDDTYATDFLALGSANFIAGEGYDTLILDWGDATGAVDYNATNGYYRTYKNGYNWI 1627
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ + G D+ ++ F G D F + D + G D
Sbjct: 1628 YQSFSDIEEID-ITTGAGADLVYAVGGRDRFVTQGGNDQIFGT----DKGDTILAGDGHD 1682
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
+ + +P L A+ D FA +
Sbjct: 1683 WADVDLRFDATAGE--TDPVEDITLVLAATQSDAAVFFAGTENETH 1726
Score = 39.0 bits (89), Expect = 2.8, Method: Composition-based stats.
Identities = 51/411 (12%), Positives = 99/411 (24%), Gaps = 24/411 (5%)
Query: 12 RIADHLLRDQYW-------SNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSK 64
+ DHL R W + + +T S + +S
Sbjct: 2358 YLGDHLSRGTSWFVAGDGYDKLTLDWSATGSSTEFFSNATNTWYRTHISGYNYIYQYFSD 2417
Query: 65 VVDLTFEETSIHSDIKFISS-----NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
+ +L + D+ + NG + + D D + + T
Sbjct: 2418 IEELDLTTSDAGDDVWAVGGRDRFVTNGGNDRIHGVDKGDTILAGDGHDWVQLDLTFDTA 2477
Query: 120 LSHN-ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-MMDASF 177
+ +I LG + + + + D+ + ++
Sbjct: 2478 AGEVDPVEDIVVNLGFLQGATATFYAGTEFETQLQGIEQAHLYTGAGNDTYDTRGVYSTV 2537
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
GY D Y + S G + SG L +
Sbjct: 2538 GYFGYSHYFDAGDGDDRYLSDHLSRGTS--WFVAGDGYDRLTLDWSGSGSSTTLHTSGSS 2595
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ + + + + + V G D + N ++ D
Sbjct: 2596 TGYRTHISGYDYIYTYFSDIEELDLTTSDAGDDVWAVGGRDRFVTNGGHDKIHSVDKGDT 2655
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G G D V + L FA ++
Sbjct: 2656 IHGGDGRDWVQLDLTFG-------AGETEVVEDILVDLSALQSTTSTYFAGTDYETELSG 2708
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYE-FGLSEGRDITFDSYLYLGS 407
I YT S +D + V G ++ + F +G D +G+
Sbjct: 2709 IEQIHLYTGSGDDTLDVRGVYSHQTTLGYANYFSAGDGDDAYLTDLNAIGN 2759
Score = 37.8 bits (86), Expect = 5.5, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 60/220 (27%), Gaps = 17/220 (7%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQ--------TIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+ G++ Y + + + F TI SG D +L G Y + +
Sbjct: 2152 DAADGDDQYLTDHLSRGNAFFAAGDGYDKLTIDWSGTDHATELFTPSGGAQYYRTHISGY 2211
Query: 251 SSIG---GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
I + + I + V G D N+ + D G D
Sbjct: 2212 DYIYVRFTDIEELDIKTGNGGDDVWAVGGRDRFETQGGNDRIHGADKGDTILAGDGHDWV 2271
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
IV D + + + FA ++ YT S
Sbjct: 2272 SLDLTFDAAAGEVEIVEDIVVDLSALQSTTAT-----FFAGTEFETQLQGIEQAHLYTGS 2326
Query: 368 YEDLIQVIGQDVFESMKHFYE-FGLSEGRDITFDSYLYLG 406
D+ G S+ + F +G D +L G
Sbjct: 2327 GNDVYDAQGVYSTVSLFGYSNYFDAGDGDDAYLGDHLSRG 2366
>gi|83582767|ref|YP_425073.1| hemolysin-type calcium-binding region [Rhodospirillum rubrum ATCC
11170]
gi|83578083|gb|ABC24633.1| Hemolysin-type calcium-binding region [Rhodospirillum rubrum ATCC
11170]
Length = 830
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 483 FDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
F++ YL +Y D+ +A HY G KE RNP++ F A Y A + D++NA
Sbjct: 5 FNATYYLTAYPDVAKAVSLGQFASAEAHYNLFGAKELRNPNSYFDANYYAAQNPDVLNAV 64
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT-----FNPDLYLTSYDDLWNVFGSDRS-AAAQHY 594
++ HF +G E R+ + FN YL + D+ + +A H+
Sbjct: 65 SNGAFPSVWA--HFLAYGAAEERAPSTALAAFNETSYLAANPDVAAAVTAGSMPSALYHF 122
Query: 595 ITHGMKEGRALG 606
+ G+ EGR+
Sbjct: 123 LAFGVDEGRSGS 134
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
AF A Y+ ++ D+ A + + FD+ Y D+ N
Sbjct: 4 AFNATYYLTAYPDVAKAVSLGQFASAEAHYNLFGAKELRNPNSYFDANYYAAQNPDVLNA 63
Query: 499 FGS-DRGAAARHYITHGVKEGRNPD----AFKALEYIASHEDLINAFADAPDLVQAGKDH 553
+ + H++ +G E R P AF Y+A++ D+ A + + H
Sbjct: 64 VSNGAFPSVWAHFLAYGAAEERAPSTALAAFNETSYLAANPDVAAAV--TAGSMPSALYH 121
Query: 554 FSNFGYEEGRS 564
F FG +EGRS
Sbjct: 122 FLAFGVDEGRS 132
Score = 45.9 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 9/136 (6%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDL 411
+++ + TA + V + H+ FG E R+ FD+ Y D+
Sbjct: 1 MSLAFNATYYLTAYPDVAKAVSLGQFASAEAHYNLFGAKELRNPNSYFDANYYAAQNPDV 60
Query: 412 RNVFGSD-RGAAARHYITHGVKEGRNPDA----FKALEYIASHEDLINAFADAPDLVQVG 466
N + + H++ +G E R P F Y+A++ D+ A +
Sbjct: 61 LNAVSNGAFPSVWAHFLAYGAAEERAPSTALAAFNETSYLAANPDVAAAVTAGS--MPSA 118
Query: 467 KDHFSNFGCEEGRFVT 482
HF FG +EGR +
Sbjct: 119 LYHFLAFGVDEGRSGS 134
Score = 42.5 bits (98), Expect = 0.21, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 40/125 (32%), Gaps = 1/125 (0%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S +++ T +++ G++ D++ + N+ +G D D +G DT +
Sbjct: 616 SAATGANGLSVTSGTGNDTITGTANADIIRVGAGNDTVTAGAGIDRIDLGAGNDTVVFGE 675
Query: 312 PSYL-YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ A+E K D V + +AS D
Sbjct: 676 AFAAGNANHDVVTGFTFGAASEDKYDIGFTVANGTTNATANLAALAPVAVADNGSASAND 735
Query: 371 LIQVI 375
+I
Sbjct: 736 VIFTF 740
Score = 42.5 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
AF A Y+ ++ D+ A + + + H++ FG +E R+ F+ + Y D+
Sbjct: 4 AFNATYYLTAYPDVAKAVS--LGQFASAEAHYNLFGAKELRNPNSYFDANYYAAQNPDVL 61
Query: 581 NVFGSDRSAAA-QHYITHGMKEGRALGISGMQF 612
N + + H++ +G E RA + F
Sbjct: 62 NAVSNGAFPSVWAHFLAYGAAEERAPSTALAAF 94
>gi|197105753|ref|YP_002131130.1| hypothetical protein PHZ_c2291 [Phenylobacterium zucineum HLK1]
gi|196479173|gb|ACG78701.1| hypothetical protein PHZ_c2291 [Phenylobacterium zucineum HLK1]
Length = 393
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 49/168 (29%), Gaps = 7/168 (4%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ + + G + + + + G G+D++ G S ++ +G DV
Sbjct: 78 ADGSKLFVGDAGDERTSGSDLGDGLYGGPGHDVLAGLGGDDLIHGGSGDDQLAGGAGYDV 137
Query: 298 FDGSSGLDTFFYYAPS----YLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQC 350
G G D + + + + N + D+L + + D
Sbjct: 138 IYGGQGDDVIYGGSTAAGEPGEAGNFAHGNLGDDHVVGGGGDDWLYGGQGADFIAGLDGD 197
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
L + L+ G D + FG G D+
Sbjct: 198 DYLSGDLGDDELHGGLGDDSLVGGGGNDTLQGGFGADRFGGGAGDDLL 245
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 45/172 (26%), Gaps = 21/172 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-------------KNYIDLNTESWSSIG 254
+ Q IY GDD++ + + +
Sbjct: 124 SGDDQLAGGAGYDVIYGGQGDDVIYGGSTAAGEPGEAGNFAHGNLGDDHVVGGGGDDWLY 183
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + IA + + G G+D + G ++ GND G G D F
Sbjct: 184 GGQGADFIAGLDGDDYLSGDLGDDELHGGLGDDSLVGGGGNDTLQGGFGADRF---GGGA 240
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
+ + + + D L + + R E+ A
Sbjct: 241 GDDLLVAQGPEGAWMRGDEGNDTL-----VTATAGRDTLYGGEGRDRFEFVA 287
Score = 44.4 bits (103), Expect = 0.063, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 35/156 (22%), Gaps = 1/156 (0%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ ER +D +L + + G D + +G D+
Sbjct: 88 AGDERTSGSDLGDGLYGGPGHDVLAGLGGDDLIHGGSGDDQLAGGAGYDVIYGGQGDDVI 147
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+ G F G + + + L D
Sbjct: 148 YGGSTAAGE-PGEAGNFAHGNLGDDHVVGGGGDDWLYGGQGADFIAGLDGDDYLSGDLGD 206
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+G D G + F + + G D
Sbjct: 207 DELHGGLGDDSLVGGGGNDTLQGGFGADRFGGGAGD 242
Score = 38.2 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 42/214 (19%), Positives = 68/214 (31%), Gaps = 18/214 (8%)
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYNG---GYPVYGVDNDYENDS 157
D D G G L H++ LG L+H GS + G Y V + D
Sbjct: 86 GDAGDERTSGSDLGDGLYGGPGHDVLAGLGGDDLIHGGSGDDQLAGGAGYDVIYGGQGDD 145
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
+ + + + G V +YG + +
Sbjct: 146 VIYGGSTAAGEPGEAGNFAHGNLGDDHVVGGGGDDWLYGGQGADFIAGLDG-DDYLSGDL 204
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
++ GDD L + GG + + + GG ++ +AQ + G GN
Sbjct: 205 GDDELHGGLGDDSL---VGGGGNDTLQGGFGADRFGGGAGDDLLVAQGPEGAWMRGDEGN 261
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
D ++ +A G D G G D F + A
Sbjct: 262 DTLVTATA--------GRDTLYGGEGRDRFEFVA 287
>gi|332561385|ref|ZP_08415700.1| hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
WS8N]
gi|332274184|gb|EGJ19501.1| hemolysin-type calcium-binding protein [Rhodobacter sphaeroides
WS8N]
Length = 313
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/257 (15%), Positives = 71/257 (27%), Gaps = 43/257 (16%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI-------GHALGLMHPG 138
+ TP + AD G G TI + + + G H
Sbjct: 20 SALAQTPAGTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGDGDDLLDGGFYHDA 79
Query: 139 SY-------------NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
Y + VYG D + + D
Sbjct: 80 CYGQAGNDTFRIRGVDLADDVYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPFGP 139
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ +++ + G+ + S +T+ G+D L+
Sbjct: 140 YVVKSIEIVIGSARA----------DVLLGSRLAETLSGGLGNDRLE------------- 176
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G E + T + ++G +GND + G +V +GND+ G G D
Sbjct: 177 GRGGADVLRGMEGADALFGGTGNDLLLGGAGNDRLDGQWERDVLVGGAGNDILIGGGGAD 236
Query: 306 TFFYYAPSYLYKIYRFE 322
F + +I F
Sbjct: 237 RFVFAGNFGRDRIRDFS 253
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 46/180 (25%), Gaps = 31/180 (17%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN---------DVFDGSSGLD 305
G N + + +VG GND + G + + G+ D G +G D
Sbjct: 28 GTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGDGDDLLDGGFYHDACYGQAGND 87
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDAN----------------------EHKQDFLSDVER 343
TF +Y + + + +E
Sbjct: 88 TFRIRGVDLADDVYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPFGPYVVKSIEI 147
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + + + + L + L G DV M+ G D+
Sbjct: 148 VIGSARADVLLGSRLAETLSGGLGNDRLEGRGGADVLRGMEGADALFGGTGNDLLLGGAG 207
>gi|197103006|ref|NP_001124793.1| matrix metalloproteinase-14 precursor [Pongo abelii]
gi|75070961|sp|Q5RES1|MMP14_PONAB RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; Flags:
Precursor
gi|55725913|emb|CAH89736.1| hypothetical protein [Pongo abelii]
Length = 582
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 47/164 (28%), Gaps = 35/164 (21%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATYEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + +FD A+ W G
Sbjct: 167 IREGHEKQADVMIFFAEGFHGDSTPFDGEGGFLAHAYFP--GPNIGGDTHFDSAEPWTVG 224
Query: 114 IGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 225 NEDLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|78189872|ref|YP_380210.1| hypothetical protein Cag_1919 [Chlorobium chlorochromatii CaD3]
gi|78172071|gb|ABB29167.1| hypothetical protein Cag_1919 [Chlorobium chlorochromatii CaD3]
Length = 1526
Score = 64.4 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 8/177 (4%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNM 260
I V + +Y G + L TL GG + I + + G + N
Sbjct: 1323 IIGDNVTIRGGDGANIVYAGAGRQDIKLGDESDTLHGGTGDDIVASEGGDDWLYGDDGND 1382
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T++ + + G +G+D + G + N+ GND+ +G +G D F + +
Sbjct: 1383 TVSGGADNDHLFGGTGDDSLDGGTGNDTLDGGDGNDMLNGGTGNDVFTGGVGTDTIQFAG 1442
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ + Q L+D A + + S + + S + S +D+ V
Sbjct: 1443 LFSNYTITYNPGAHQYVLTDT---TGATKTVSSTDFELFSFTDGVKSDDDVYAVAAN 1496
Score = 39.4 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 29/138 (21%), Gaps = 14/138 (10%)
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
N G G + + A K+ D ++
Sbjct: 1325 GDNVTIRGGDGANIVYAGAGRQDIKL----GDESDTLHGGTGDDIVAS------EGGDDW 1374
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
+ A + L G D + +G D+ D
Sbjct: 1375 LYGDDGNDTVSGGADNDHLFGGTGDDSLDGGTGNDTLDGGDGNDMLNGGTG----NDVFT 1430
Query: 413 NVFGSDRGAAARHYITHG 430
G+D A + +
Sbjct: 1431 GGVGTDTIQFAGLFSNYT 1448
>gi|84683432|ref|ZP_01011335.1| type I secretion target repeat protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84668175|gb|EAQ14642.1| type I secretion target repeat protein [Rhodobacterales bacterium
HTCC2654]
Length = 710
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 49/165 (29%), Gaps = 24/165 (14%)
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLL----- 231
Y + M +D +IYG + I+ + + G D +
Sbjct: 499 YISGAMTAD-----RIYG---TDGSDEIWGRAGHDFINAGGGDDWVQGNKGRDKILTGTG 550
Query: 232 -DLTLIGGVKNYIDLNTE--------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
D T + I I G + T+ + + G SG+DV+I
Sbjct: 551 DDFTKGRKGPDTILGGPGDDDLRGNRGHDQIFGEAGHDTLKGGRGNDWLYGGSGDDVIIA 610
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
++V G+D+ G G D F + +
Sbjct: 611 GRGDDVLVGGPGHDILSGKQGADRFVFKGAGSNLVTDYDAGEDTL 655
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/301 (10%), Positives = 75/301 (24%), Gaps = 15/301 (4%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ Y I I D+ + + DL + + + + +
Sbjct: 425 SAYVPGFSSMSGQRISLINDAAHWNEARWFAETDPLSAGDLGNSAVIDVTLKPFEVVMVE 484
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + + + + + G + + + G+D G +G D F A + +
Sbjct: 485 YVLNGAADRFAAPEYISGAMTADRIYGTDGSDEIWGRAGHD--FINAGGGDDWVQGNKGR 542
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ + L ++ + G D + +
Sbjct: 543 DKILTGTGDDFTKGR--------KGPDTILGGPGDDDLRGNRGHDQIFGEAGHDTLKGGR 594
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G D+ G DD+ + + V +G + +
Sbjct: 595 GNDWLYGGSGDDVI-----IAGRGDDVLVGGPGHDILSGKQGADRFVFKGAGSNLVTDYD 649
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
DL A DL + + G + + D R++ D
Sbjct: 650 AGEDTLDLSETGARYSDLTIMNTTARIDGETTTGALIDYGEGTAFLVAIDARDLGADDFV 709
Query: 505 A 505
Sbjct: 710 F 710
>gi|56697255|ref|YP_167620.1| type I secretion target repeat-containing protein [Ruegeria
pomeroyi DSS-3]
gi|56678992|gb|AAV95658.1| type I secretion target repeat protein [Ruegeria pomeroyi DSS-3]
Length = 1089
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 59/425 (13%), Positives = 114/425 (26%), Gaps = 27/425 (6%)
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
ND+ + + + + D+ G + ++ A YG S G+ + Q
Sbjct: 515 SNDTLIGDGGNDTLEGGTDDDSITGGAGSDVIFTGGAASNGYGRDTASGGD----GDDQL 570
Query: 214 KDSPFIQTIYDSGGDDLLDL-TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
S +Y G+D L+ + + + + +
Sbjct: 571 IGSNGDDWLYGDAGNDTLNGGEDYSTADVDYLYGGDGNDLLISGQGTTRADHQHRGDQLF 630
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G +G+D + G A++ G+D G +G D + + +
Sbjct: 631 GEAGDDTLQGGQADDHLEGGVGDDSITGGAGNDVI-----NTGTIGSQTVGDDTASGGDG 685
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQR------SILEYTASYEDLIQVIGQDVFESMKHF 386
+ S+ + D D++N L + LI G +
Sbjct: 686 DDEITGSNASDRLYGDAGNDTLNGGDDWITADVDYLYGGDGNDLLISGQGTTRADHQHRG 745
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
+ G D V A + + + G
Sbjct: 746 DQLFGEAGDDTL---QGGQADDHLEGGVGDDSITGGAGNDVINTGTIGSQTVGDDTASGG 802
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+++ + A G D + V YLY G +DL A
Sbjct: 803 DGDDEITGSNASDRLYGDAGNDTLNGGDDWITADVD---YLYGGDGNDLLISGQGTTRAD 859
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT 566
+H E + L+ + + L + AG D N G + R+
Sbjct: 860 HQHRGDQLFGEAGD----DTLQGGQADDHLEGGAGNDSITGGAGND-VINTGTFDSRTAG 914
Query: 567 FNPDL 571
+
Sbjct: 915 HDTAA 919
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 78/299 (26%), Gaps = 21/299 (7%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I + + G ND +IG+ N+ + +D G +G D F +
Sbjct: 499 DEIIGTGFNDHLEGFDSNDTLIGDGGNDTLEGGTDDDSITGGAGSDVIFTGGAASN---- 554
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR------SILEYTASYEDLIQ 373
+ Q S+ + + D D++N + L + LI
Sbjct: 555 -GYGRDTASGGDGDDQLIGSNGDDWLYGDAGNDTLNGGEDYSTADVDYLYGGDGNDLLIS 613
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G + + G D V A + + +
Sbjct: 614 GQGTTRADHQHRGDQLFGEAGDDTL---QGGQADDHLEGGVGDDSITGGAGNDVINTGTI 670
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD 493
G +++ + A G D + V YLY G +
Sbjct: 671 GSQTVGDDTASGGDGDDEITGSNASDRLYGDAGNDTLNGGDDWITADVD---YLYGGDGN 727
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
DL A +H E + L+ + + L D AG D
Sbjct: 728 DLLISGQGTTRADHQHRGDQLFGEAGD----DTLQGGQADDHLEGGVGDDSITGGAGND 782
>gi|261244996|ref|NP_001159653.1| matrix metalloproteinase-14 [Ovis aries]
gi|256665391|gb|ACV04841.1| membrane-inserted matrix metallopeptidase 14 [Ovis aries]
Length = 582
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 113 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 165
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 166 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 225
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 226 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 267
>gi|126343245|ref|XP_001378076.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 528
Score = 64.4 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 55/190 (28%), Gaps = 45/190 (23%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + ++ + A+ A WS+V +L+F E +DI+
Sbjct: 105 RWRKRHLTFRILNWPSTLPVHT-------ARTALLTAFRYWSRVANLSFREVQAGWADIR 157
Query: 81 FISSNNGYVCTPRYDSRYFM-----------EINFDKADVWRYGIGKGTILSHNALHEIG 129
+ ++FD+++ W G L A HE+G
Sbjct: 158 LSFHGKYSAYCSKGFDGPGNVLAHADIPELGSVHFDESETWTEATKMGVNLRIIAAHELG 217
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
HALGL H Y + + + F D+
Sbjct: 218 HALGLGH--------------------------SRYPQALMAPVYSGFRPYFQLHFDDVA 251
Query: 190 AVQKIYGAPK 199
+Q +YG
Sbjct: 252 GIQALYGKRT 261
>gi|254426483|ref|ZP_05040198.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196187495|gb|EDX82462.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 298
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 60/187 (32%), Gaps = 8/187 (4%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++++G N+V+ GN+ ++ G DV G G DT + L +
Sbjct: 58 GGYGNDTIIGDENNNVIKGNAGDDFILGVEGTDVIYGGKGNDTIAFDIAGMLSDSFSRGV 117
Query: 324 AIIVY----DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + ++ + +E + + + + + + L + + L+ G D
Sbjct: 118 YANLSKQEAIDPCYNREKIYSIENVIGTYKADELIGDFRPNELAGSDGNDKLLGKGGNDF 177
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF--GSDRGAAARHYITHGVKEGRNP 437
+ G D +YL D F G D+ + G +
Sbjct: 178 LYGGRGPDFMIGGSGSDQY--AYLDKSEGSDRIEGFKSGVDQIMIRGSWFLPGHPSSYSL 235
Query: 438 DAFKALE 444
+ +
Sbjct: 236 GQLPSGQ 242
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 22/138 (15%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW------------------ 250
+ IY G+D + + G + + +
Sbjct: 79 GDDFILGVEGTDVIYGGKGNDTIAFDIAGMLSDSFSRGVYANLSKQEAIDPCYNREKIYS 138
Query: 251 --SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF- 307
+ IG Y+ + I E + GS GND ++G N+ + G D G SG D +
Sbjct: 139 IENVIGTYKADELIGDFRPNE-LAGSDGNDKLLGKGGNDFLYGGRGPDFMIGGSGSDQYA 197
Query: 308 FYYAPSYLYKIYRFENAI 325
+ +I F++ +
Sbjct: 198 YLDKSEGSDRIEGFKSGV 215
>gi|168705042|ref|ZP_02737319.1| Na-Ca exchanger/integrin-beta4 [Gemmata obscuriglobus UQM 2246]
Length = 371
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 85/276 (30%), Gaps = 15/276 (5%)
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIY--GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
D + + G T ++ V Y G + S T Y G
Sbjct: 54 DVVPNYLGGIDVTVTLAGDGPVLYRYDIGETTAIRFGGYDGNDYISNLSWNKLTAYGGRG 113
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
DD L GG + E I GY N + +++ G+D V G N+
Sbjct: 114 DDTL----RGGYVADELIGGEGNDFIRGYTGNDFVNGDGGNDTIYTDEGDDTVYGGDGND 169
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ + +GND G +G D+ + A + +Y + Y + ++ + + +
Sbjct: 170 IVYAGAGNDKVYGGAGRDSVY--AGAGNDIVYGDYDPAAHYVYVDDEEGYRYKPTIVLTS 227
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES-------MKHFYEFGLSEGRDITFD 400
+ L+ + L G D + + G GR +T
Sbjct: 228 NAEDTLYGEDGEDRLQGGDGNDKLYGGNGNDTLGATWMAVEWGPEYQYDGSYVGRPVTIK 287
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
S D L G+D T +G +
Sbjct: 288 SDEGESGDDYLSGGAGNDTLRGGDGSDTLSGGDGSD 323
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/289 (15%), Positives = 75/289 (25%), Gaps = 20/289 (6%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA----------QHTVIESVVGS 274
G D + L G V D+ + GGY+ N I+ +++ G
Sbjct: 61 GGIDVTVTLAGDGPVLYRYDIGETTAIRFGGYDGNDYISNLSWNKLTAYGGRGDDTLRGG 120
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIV 327
D +IG N+ +GND +G G DT + Y +Y V
Sbjct: 121 YVADELIGGEGNDFIRGYTGNDFVNGDGGNDTIYTDEGDDTVYGGDGNDIVYAGAGNDKV 180
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
Y + + + D + V Y ++ +D
Sbjct: 181 YGGAGRDSVYAGAGNDIVYGDYDPAAHYVYVDDEEGYRYKPTIVLTSNAEDTLYGEDGED 240
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH--GVKEGRNPDAFKALEY 445
+G D + V Y+ +K L
Sbjct: 241 RLQGGDGNDKLYGGNGNDTLGATWMAVEWGPEYQYDGSYVGRPVTIKSDEGESGDDYLSG 300
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
A ++ L G + G G YLY + D
Sbjct: 301 GAGNDTLRGGDGSDTLSGGDG-SDWLYAGWVWGSLDGDKDYLYGDAGYD 348
Score = 41.7 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 67/247 (27%), Gaps = 22/247 (8%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ T R I + D R G + I G
Sbjct: 106 LTAYGGRGDDTLRGGYVADELIGGEGNDFIRGYTGNDFVNGDGGNDTIYTDEGDDTVYGG 165
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-- 198
+G VY + + Y + ++ + A + D Y
Sbjct: 166 DGNDIVYAGAGNDKVYGGAGRDSVYAGAGNDIVYGDYDPAAHYVYVDDEE-GYRYKPTIV 224
Query: 199 -KGSLGNNIYKIE--VQQKDSPFIQTIYDSGGDDLLDLT--------LIGGVKNYIDLNT 247
+ + +Y + + + +Y G+D L T +Y+
Sbjct: 225 LTSNAEDTLYGEDGEDRLQGGDGNDKLYGGNGNDTLGATWMAVEWGPEYQYDGSYV-GRP 283
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES-------SGNDVFDG 300
+ S G + ++ +++ G G+D + G ++ + D G
Sbjct: 284 VTIKSDEGESGDDYLSGGAGNDTLRGGDGSDTLSGGDGSDWLYAGWVWGSLDGDKDYLYG 343
Query: 301 SSGLDTF 307
+G D F
Sbjct: 344 DAGYDHF 350
Score = 38.2 bits (87), Expect = 4.8, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 58/281 (20%), Gaps = 18/281 (6%)
Query: 289 FFESSGNDVFD----GSSGLD-TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
++G+D D G+D T + Y + D++S++
Sbjct: 44 IEGTAGDDRVDVVPNYLGGIDVTVTLAGDGPVLYRYDIGETTAIRFGGYDGNDYISNLSW 103
Query: 344 LRFAD----QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ L + + G D EG D +
Sbjct: 104 NKLTAYGGRGDDTLRGGYVADELIGGEGNDFIRGYTGNDFVNGDGGNDTIYTDEGDDTVY 163
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
Y N Y G A E+
Sbjct: 164 GGDGNDIVYAGAGNDKVYGGAGRDSVYAGAGNDIVYGDYDPAAHYVYVDDEEGYRYKPTI 223
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
+ G + + + LY G+ +D Y G GR
Sbjct: 224 VLTSNAEDTLYGEDGEDRLQGGDGNDKLYGGNGNDTLGATWMAVEWG-PEYQYDGSYVGR 282
Query: 520 NPD--------AFKALEYIASHEDLINAFADAPDLVQAGKD 552
L A ++ L G D
Sbjct: 283 PVTIKSDEGESGDDYLSGGAGNDTLRGGDGSDTLSGGDGSD 323
>gi|157688260|gb|ABQ02447.1| enterohemolysin [Escherichia coli]
Length = 997
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 57/179 (31%), Gaps = 12/179 (6%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D GG N I + I G N + + + G G+D + G S N+
Sbjct: 712 DDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSG 771
Query: 292 SSGNDVFDGSSGLDTF----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD------- 340
GN+ G SG D Y S + I D+L+
Sbjct: 772 GDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGIDLLDGGEGNDYLNGGFGNDIY 831
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDL-IQVIGQDVFESMKHFYEFGLSEGRDIT 398
V R + I K + S++D+ + +G D+ + +E D+
Sbjct: 832 VYRQNYGHHTIADEGGKGDRLHLSDISFDDIAFKKVGNDLIMNKAINGVLSFNESNDVN 890
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 40/160 (25%), Gaps = 11/160 (6%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRAGGISYDV----IDKLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGV 431
G D +G D F D L G++ G+ HG
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSG----NDKLSGGDGNNYLTGGSGNDELQAHGA 792
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ Y + L + G D +
Sbjct: 793 YNILSGGTGDDKLYGGGIDLLDGGEGNDYLNGGFGNDIYV 832
>gi|330862952|emb|CBX73087.1| hypothetical protein YEW_HI32550 [Yersinia enterocolitica W22703]
Length = 449
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 53/169 (31%), Gaps = 24/169 (14%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
S + D G + +IGG N I + ++ G N I H +
Sbjct: 91 NTTPSKSALLTDNDDFIGHKYIRNKVIGGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFD 150
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+ G GND++IG N+ +GND+ DG G D + +
Sbjct: 151 SLFGQDGNDILIGGEGNDGLTGGAGNDILDGGDGNDQL------------HGDADGLASF 198
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
A+E K +E + + L G D
Sbjct: 199 ASESSWR------------GNDIIFGGKGNDRIEGEKNNDYLAGGTGND 235
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 44/149 (29%), Gaps = 17/149 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G+D++ G + + G E N +
Sbjct: 121 GNNIIQGGDKSDNLAGGAGNDII----FGHASFDSLFGQDGNDILIGGEGNDGLTGGAGN 176
Query: 269 ESVVGSSGNDVVIGNS-------------ANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + G GND + G++ N++ F GND +G D +
Sbjct: 177 DILDGGDGNDQLHGDADGLASFASESSWRGNDIIFGGKGNDRIEGEKNNDYLAGGTGNDS 236
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERL 344
Y ++ ++ + + + +
Sbjct: 237 YIFSAYDGINMIVEYSNEENTISINDHFF 265
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 51/191 (26%), Gaps = 46/191 (24%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ + I + V+G GN+++ G ++ +GND+ G + D+ F
Sbjct: 101 TDNDDFIGHKYIRNKVIGGDGNNIIQGGDKSDNLAGGAGNDIIFGHASFDSLF------- 153
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
IL + L
Sbjct: 154 ---------------------------------------GQDGNDILIGGEGNDGLTGGA 174
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D+ + + +F S D + G+DR ++ G
Sbjct: 175 GNDILDGGDGNDQLHGDADGLASFASESSWRGNDIIFGGKGNDRIEGEKNNDYLAGGTGN 234
Query: 436 NPDAFKALEYI 446
+ F A + I
Sbjct: 235 DSYIFSAYDGI 245
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 5/126 (3%)
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
++ D+ + I+ AS++ L G D+ + G DI
Sbjct: 121 GNNIIQGGDKSDNLAGGAGNDIIFGHASFDSLFGQDGNDILIGGEGNDGLTGGAGNDIL- 179
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
G +D + + A G +E +++ L +
Sbjct: 180 ----DGGDGNDQLHGDADGLASFASESSWRGNDIIFGGKGNDRIEGEKNNDYLAGGTGND 235
Query: 460 PDLVQV 465
+
Sbjct: 236 SYIFSA 241
>gi|307591306|ref|YP_003900105.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
gi|306986160|gb|ADN18039.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
Length = 1547
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 12/172 (6%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWS--SIGGYEKNMTIAQH----TVIESVVGSS 275
IY + D L + IG Y L S + + G + N + + G
Sbjct: 249 IYGTNKGDTLSVLDIGDSSLYPTLAPYSVNGGVLIGGDGNDRLLGVPLSVNDADKFYGGK 308
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY----RFENAIIVYDAN 331
GND ++G ++ +GND DG G DT Y YK+ F+ I +D
Sbjct: 309 GNDELLGFDGDDTLSGGAGNDTIDGGDGTDTAIYSGNYADYKLTLSKADFKTVTITHDGG 368
Query: 332 --EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
E D L++VE +F D+ + + +++ T S D I + E
Sbjct: 369 TQEDGIDTLTNVEFAQFKDKKVPLKGLDLAFVIDTTGSMLDDIDAVKASTSE 420
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 69/205 (33%), Gaps = 17/205 (8%)
Query: 231 LDLTLIGGVKNYIDLNTESWS---SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
L+ + ++ I++ + + + G N + + G G+D + G N+
Sbjct: 1341 LNGAIFATSQSTINILNDDLTLAPTFAGTNGNDDFTGGNGNDIINGEGGDDSLNGAGGND 1400
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF--LSDVERLR 345
SG DV G G DTF Y + F N + N + D L+++
Sbjct: 1401 TLNGGSGQDVLTGGDGADTFVYN----NFTDSLFANPDRIRSFNPTQGDRIDLANIPTAT 1456
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ I + N+ Y + V +++ F+ FG S + YL
Sbjct: 1457 YNAGLIPAANLTSAVNAAYADADPTTPGEQALGVNQAV--FFSFGAS-----SKSRRTYL 1509
Query: 406 GSYDDLRNVFGSDRGAAARHYITHG 430
D + F ++ G
Sbjct: 1510 AVNDTTSS-FNANTDLFIEVTGQVG 1533
Score = 37.8 bits (86), Expect = 6.3, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 44/197 (22%), Gaps = 14/197 (7%)
Query: 297 VFDGSSGLDT--FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+ G++ DT S LY + D L V +
Sbjct: 248 IIYGTNKGDTLSVLDIGDSSLYPTLAPYSVNGGVLIGGDGNDRLLGV-----------PL 296
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR-N 413
+V ++L+ G D +G D S Y L
Sbjct: 297 SVNDADKFYGGKGNDELLGFDGDDTLSGGAGNDTIDGGDGTDTAIYSGNYADYKLTLSKA 356
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
F + G+ N + + + + L AF +
Sbjct: 357 DFKTVTITHDGGTQEDGIDTLTNVEFAQFKDKKVPLKGLDLAFVIDTTGSMLDDIDAVKA 416
Query: 474 GCEEGRFVTFDSYLYLG 490
E FD
Sbjct: 417 STSEIINNIFDGSFPFA 433
>gi|184158211|ref|YP_001846550.1| RTX toxin [Acinetobacter baumannii ACICU]
gi|183209805|gb|ACC57203.1| RTX toxin [Acinetobacter baumannii ACICU]
gi|322508532|gb|ADX03986.1| RTX toxin [Acinetobacter baumannii 1656-2]
Length = 1450
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 83/271 (30%), Gaps = 36/271 (13%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + ++ + + + + D G ++ + + + G
Sbjct: 994 TASGTYKPTDPTFTQIIKGSTGNDYLYGGNGDDTLISNGGSDSLYGGSGNDTLIY--GGN 1051
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
P Y G ++ Y D L +SY D+ + + Y + +I+ Q
Sbjct: 1052 SPNIYT-GLIGEAGNDTYIVDKALLGSLSYVHILDNTNEQNTLYLKSVSADEIILKQ--- 1107
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQ----TIYDSGGDDL--------LDLTLIGGVKNYI 243
+ + I F + +I G + L+G +
Sbjct: 1108 -----ASADRIITFNDSTATIHFGEGQLSSIVFDDGTVWNKAQIEANIIGRLLGTDGDDH 1162
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV------ 297
++S I G + N TI + + G +G+D +I N ++ + SGND
Sbjct: 1163 LQADANYSVIYGLDGNDTIQGGVQNDYLYGGNGDDTLISNGGSDSLYGGSGNDTLIYGGN 1222
Query: 298 -------FDGSSGLDTFFYYAPSYLYKIYRF 321
G +G DT+ Y
Sbjct: 1223 SPNVYTGLIGEAGNDTYIVDKALLGSLSYVH 1253
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 25/258 (9%), Positives = 64/258 (24%), Gaps = 23/258 (8%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+YG + + ++Y G+D L +
Sbjct: 1016 NDYLYGGN----------GDDTLISNGGSDSLYGGSGNDTLIYGGNSPNIYTGLIGEAGN 1065
Query: 251 SS------IGGYEKNMTIAQHTVIES---VVGSSGNDVVIGNSANNVFFE-SSGNDVFDG 300
+ + G + I +T ++ + S +++++ ++ + +
Sbjct: 1066 DTYIVDKALLGSLSYVHILDNTNEQNTLYLKSVSADEIILKQASADRIITFNDSTATIHF 1125
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVK 357
G + + ++ + E II D L ++ + D
Sbjct: 1126 GEGQLSSIVFDDGTVWNKAQIEANIIGRLLGTDGDDHLQADANYSVIYGLDGNDTIQGGV 1185
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
Q L + LI G D + + D
Sbjct: 1186 QNDYLYGGNGDDTLISNGGSDSLYGGSGNDTLIYGGNSPNVYTGLIGEAGNDTYIVDKAL 1245
Query: 418 DRGAAARHYITHGVKEGR 435
+ H + + ++
Sbjct: 1246 LGSLSYVHILDNTNEQNT 1263
Score = 39.0 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 57/372 (15%), Positives = 111/372 (29%), Gaps = 46/372 (12%)
Query: 251 SSIGGYEKNMTIAQHTVIES-------VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
S+I ++ +TV E+ + GN+ ++ +A + N +F
Sbjct: 876 SAIADASGYYSVILNTVYENGELLKVIATDNKGNENLLQLNAPDTTAPILAN-LFSYDLS 934
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE------------------RLR 345
D + APS Y + + + V+ E K D+L +VE +
Sbjct: 935 TDKIIFNAPSDSYFVEQKIDGAWVHVNIEEKFDWL-NVEYRVTATDQAGNSSQPLTTIIN 993
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT----FDS 401
A + I++ + + L G D S G D
Sbjct: 994 TASGTYKPTDPTFTQIIKGSTGNDYLYGGNGDDTLISNGGSDSLYGGSGNDTLIYGGNSP 1053
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
+Y G + N A + + N L+ +++ E ++ +
Sbjct: 1054 NIYTGLIGEAGNDTYIVDKALLGSLSYVHILDNTNEQNTLYLKSVSADEIILKQASADRI 1113
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLY-----LGSY--DDLRNVFGSDRGAAARHYITHG 514
+ +FG + + FD + + L G D A +Y
Sbjct: 1114 ITFNDSTATIHFGEGQLSSIVFDDGTVWNKAQIEANIIGRLLGTDGDDHLQADANYSVI- 1172
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLT 574
D ++ ++ L D + G D S +G ++ + +
Sbjct: 1173 ----YGLDGNDTIQGGVQNDYLYGGNGDDTLISNGGSD--SLYGGSGNDTLIYGGNS-PN 1225
Query: 575 SYDDLWNVFGSD 586
Y L G+D
Sbjct: 1226 VYTGLIGEAGND 1237
>gi|149204439|ref|ZP_01881406.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
gi|149142324|gb|EDM30371.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
Length = 330
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 62/228 (27%), Gaps = 16/228 (7%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ + I+ + + G + T+ + G + TI +S
Sbjct: 37 SDNEGPRLLDGIFGQDAPIGMGEIINGTPEAETLTGTKGGDQLHGQGSDDTIFGGMGDDS 96
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G G+D + G++ ++ G D G G DT + + ++ + +
Sbjct: 97 LLGGLGSDRISGDAGDDTLHGGDGMDSLFGGEGADTLY--GHNDADELSGGDGDDSLV-- 152
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES---MKHFY 387
D L L+ + L G DV
Sbjct: 153 GSAGNDLLRG------DAGHDALHGDIGDDTLQGGLGQDTLFGGWGDDVLVGLVDDTATP 206
Query: 388 EFGLSEGRDITF---DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
S+ RD L L + DL +I G
Sbjct: 207 TLDDSDARDFLNGGSGDDLILAGHGDLVTTGAGADTVLLGDWIEEGQA 254
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 14/172 (8%)
Query: 202 LGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ I+ + I GDD L GG E ++ G+
Sbjct: 84 SDDTIFGGMGDDSLLGGLGSDRISGDAGDDTL----HGGDGMDSLFGGEGADTLYGHNDA 139
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
++ +S+VGS+GND++ G++ ++ G+D G G DT + +
Sbjct: 140 DELSGGDGDDSLVGSAGNDLLRGDAGHDALHGDIGDDTLQGGLGQDTL-FGGWGDDVLVG 198
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
++ + +DFL+ D + ++ A + +
Sbjct: 199 LVDDTATPTLDDSDARDFLNG-------GSGDDLILAGHGDLVTTGAGADTV 243
>gi|85706670|ref|ZP_01037762.1| glycosyltransferase [Roseovarius sp. 217]
gi|85668728|gb|EAQ23597.1| glycosyltransferase [Roseovarius sp. 217]
Length = 638
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ Y +Y D+ A H+ G GR+P F + Y+A++ D+ A
Sbjct: 19 FDARWYSDTYPDVART----PLDPASHFARIGAFLGRDPGPQFSSRYYLAANPDVAAA-G 73
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSIT 566
P L H+ + G++EGR+
Sbjct: 74 LNPLL------HYLSTGHKEGRTPN 92
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 13/88 (14%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSY 576
R+ F A Y ++ D+ P HF+ G GR F+ YL +
Sbjct: 14 RSSAFFDARWYSDTYPDVART-PLDP------ASHFARIGAFLGRDPGPQFSSRYYLAAN 66
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEGRA 604
D+ HY++ G KEGR
Sbjct: 67 PDVAAA----GLNPLLHYLSTGHKEGRT 90
Score = 57.5 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 13/91 (14%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
R+ F A Y ++ D+ D HF+ G GR F S YL +
Sbjct: 14 RSSAFFDARWYSDTYPDVARTPLDPA-------SHFARIGAFLGRDPGPQFSSRYYLAAN 66
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
D+ + HY++ G KEGR P+
Sbjct: 67 PDVAAAGLN----PLLHYLSTGHKEGRTPNP 93
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 47/131 (35%), Gaps = 20/131 (15%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y +Y D+ A H+ G GR+P F + Y+A++ D+ A
Sbjct: 19 FDARWYSDTYPDVA----RTPLDPASHFARIGAFLGRDPGPQFSSRYYLAANPDVAAAGL 74
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYD--------DLRNVFGSDRGAAARH 509
+ H+ + G +EGR + DL G D G A
Sbjct: 75 NPLL-------HYLSTGHKEGRTPNPGVLPTGPTPQLQRLKHLRDLLETGGLDAGPRAAL 127
Query: 510 YITHGVKEGRN 520
G ++G +
Sbjct: 128 KDMAGGRDGPD 138
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 39/143 (27%), Gaps = 22/143 (15%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSYDDLR 412
+ Y+ +Y D+ + + HF G GRD F S YL + D+
Sbjct: 15 SSAFFDARWYSDTYPDVART----PLDPASHFARIGAFLGRDPGPQFSSRYYLAANPDVA 70
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
HY++ G KEGR P + ++
Sbjct: 71 AA----GLNPLLHYLSTGHKEGRTP-----------NPGVLPTGPTPQLQRLKHLRDLLE 115
Query: 473 FGCEE-GRFVTFDSYLYLGSYDD 494
G + G D
Sbjct: 116 TGGLDAGPRAALKDMAGGRDGPD 138
>gi|195957725|gb|ACG59772.1| myroilysin precursor [Myroides profundi]
Length = 273
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 50/190 (26%), Gaps = 3/190 (1%)
Query: 36 TTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKFISS-NNGYVCTPR 93
++ + P + + EWS ++TF S I+ + G
Sbjct: 79 NGSVITVGLYGGTPYVRSKVKQYAQEWSNYANITFNFVESGTPQIRVTFTQGAGSYSYLG 138
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ W S +HE GHALG++H + + + Y
Sbjct: 139 TQALSIPSNEETMNFGWFDDSTSDAEFSRTVIHEFGHALGMIHEHQHPLTNIPWDKNKVY 198
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ + S +++ D ++ Y N
Sbjct: 199 AYYAGYPNYWSKKDVDNNLFATYSTTQTQYSAYDTQSIMH-YSISSALTTNGFSVGNNSV 257
Query: 214 KDSPFIQTIY 223
+ Q I
Sbjct: 258 LSATDKQFIA 267
>gi|157688262|gb|ABQ02448.1| enterohemolysin [Escherichia coli]
Length = 997
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 57/179 (31%), Gaps = 12/179 (6%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D GG N I + I G N + + + G G+D + G S N+
Sbjct: 712 DDEFKGGKFNDIFHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSG 771
Query: 292 SSGNDVFDGSSGLDTF----FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD------- 340
GN+ G SG D Y S + I D+L+
Sbjct: 772 GDGNNYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGIDLLDGGEGNDYLNGGFGNDIY 831
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDL-IQVIGQDVFESMKHFYEFGLSEGRDIT 398
V R + I K + S++D+ + +G D+ + +E D+
Sbjct: 832 VYRQNYGHHTIADEGGKGDRLHLSDISFDDIAFKKVGNDLIMNKAINGVLSFNESNDVN 890
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 40/160 (25%), Gaps = 11/160 (6%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 681 QYRDFEFRAGGISYDV----IDKLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 736
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD---RGAAARHYITHGV 431
G D +G D F D L G++ G+ HG
Sbjct: 737 YGNDRLYGDDGDDYISGGQGDDQLFGGSG----NDKLSGGDGNNYLTGGSGNDELQAHGA 792
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ Y + L + G D +
Sbjct: 793 YNILSGGTGDDKLYGGGIDLLDGGEGNDYLNGGFGNDIYV 832
>gi|47215736|emb|CAG05747.1| unnamed protein product [Tetraodon nigroviridis]
Length = 560
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 45/139 (32%), Gaps = 34/139 (24%)
Query: 26 YFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------TSIH 76
YF + T E R A W V+ LTF E +
Sbjct: 115 YFSSASIENYTPKVGK-------QATYEAIRKAFKVWESVIPLTFREIPYSQIKNKVDRY 167
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKG-TIL 120
+DI + + P + + +FD A+ W G +G +
Sbjct: 168 ADIMLSFAEGFHGDSSPFDGEGGFLAHAFFP--GNGIGGDTHFDLAEPWTVGPDQGGNDV 225
Query: 121 SHNALHEIGHALGLMHPGS 139
A+HE+GHALGL H
Sbjct: 226 FLVAVHELGHALGLEHSND 244
>gi|62897673|dbj|BAD96776.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
Length = 405
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 54/185 (29%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ V A WS V LTF + S +DI
Sbjct: 44 RWEQTHLTYRIENYTPDLPRADVD-------HVIEKAFQLWSNVTPLTFTKVSEGQADIM 96
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + P + +FD+ + W + L A
Sbjct: 97 ISFVRGDHRDNSPFDGPGGNLAHAFQP--GPGIGGDAHFDEDERWTNNF-REYNLHRVAA 153
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D + Y Q+ + T
Sbjct: 154 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQNDIDGIQAIYGRSQNPVQPIG---PQT 210
Query: 183 PMVSD 187
P D
Sbjct: 211 PKACD 215
>gi|332222943|ref|XP_003260629.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-14-like
[Nomascus leucogenys]
Length = 582
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 47/164 (28%), Gaps = 35/164 (21%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATYEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + +FD A+ W G
Sbjct: 167 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFP--GPNIGGDTHFDSAEPWTVG 224
Query: 114 IGK--GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 225 NEDLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|332186531|ref|ZP_08388275.1| cadherin domain protein [Sphingomonas sp. S17]
gi|332013514|gb|EGI55575.1| cadherin domain protein [Sphingomonas sp. S17]
Length = 1133
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 66/187 (35%), Gaps = 9/187 (4%)
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
DS S+ + +DA+ G D Y P +N+Y + V
Sbjct: 877 ALGDSIRYSIANKGDGAAFAIDATTGVLKFLNGPD-------YENPTDLNHDNVYDLTVI 929
Query: 213 QKDSPFIQTIYDS--GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
D+ + G D++ +T G + + T + G N + +
Sbjct: 930 ATDAKGAVDMQTLSIGVTDVVGITKTGTIFSDTINGTGEQDLLDGSWGNDVLNGLGGNDK 989
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G GND + G ++V G D+ G +G D F + S + + I + +
Sbjct: 990 LIGGWGNDTLNGGDGDDVLIGGMGKDILTGGAGKDIFRFETASESSTLSSLRDVITDFQS 1049
Query: 331 NEHKQDF 337
E K D
Sbjct: 1050 GEDKIDL 1056
>gi|327285686|ref|XP_003227564.1| PREDICTED: matrix metalloproteinase-14-like, partial [Anolis
carolinensis]
Length = 542
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 45/165 (27%), Gaps = 37/165 (22%)
Query: 18 LRDQYWSNYFIRYKPDVLT---THRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
++ WS+Y + + T +F R A W V L F E S
Sbjct: 78 IQGLKWSHYDLTFCIQNYTPKVGEHATF----------SAIRRAFNVWQSVTPLRFREVS 127
Query: 75 IH---------------------SDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVW 110
D G+ P + +
Sbjct: 128 YSLVREGHEPQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPHIGGDTHFDAAEPWTS 187
Query: 111 RYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
R G + A+HE+GHALGL H + + D EN
Sbjct: 188 RNDDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 232
>gi|323139733|ref|ZP_08074771.1| hypothetical protein Met49242DRAFT_4159 [Methylocystis sp. ATCC
49242]
gi|322395004|gb|EFX97567.1| hypothetical protein Met49242DRAFT_4159 [Methylocystis sp. ATCC
49242]
Length = 136
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 484 DSYLYLGSYDDLRNVFGSDR-GAAARHYITHGVKEGRNPDAF--KALEYIASHEDLINAF 540
D YL Y+D+ + +AA HY +G KE R P Y + D++ A
Sbjct: 43 DEDWYLARYEDVGRAIEAGFVNSAAEHYRLYGYKENRQPRPIKVDEDFYRQQYPDIVAAI 102
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT 566
D ++G+ HF G+ EGR
Sbjct: 103 EDNIF--ESGQQHFERSGFAEGRLPY 126
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 6/92 (6%)
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT---FNPDLYLTSYDDLWN 581
Y+A +ED+ A V + +H+ +GY+E R + D Y Y D+
Sbjct: 43 DEDWYLARYEDVGRAI--EAGFVNSAAEHYRLYGYKENRQPRPIKVDEDFYRQQYPDIVA 100
Query: 582 VFGSD-RSAAAQHYITHGMKEGRALGISGMQF 612
+ + QH+ G EGR + F
Sbjct: 101 AIEDNIFESGQQHFERSGFAEGRLPYPNFSLF 132
Score = 50.6 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 6/88 (6%)
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE---GRFVTFDSYLYLGSYDDLRN 497
Y+A +ED+ A +H+ +G +E R + D Y Y D+
Sbjct: 43 DEDWYLARYEDVGRAIEAGFVN--SAAEHYRLYGYKENRQPRPIKVDEDFYRQQYPDIVA 100
Query: 498 VFGSDR-GAAARHYITHGVKEGRNPDAF 524
+ + +H+ G EGR P
Sbjct: 101 AIEDNIFESGQQHFERSGFAEGRLPYPN 128
Score = 40.5 bits (93), Expect = 0.99, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 4/91 (4%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI---TFDSYLYLGSYDDLRNV 414
+ + V + +H+ +G E R D Y Y D+
Sbjct: 42 VDEDWYLARYEDVGRAIEAGFVNSAAEHYRLYGYKENRQPRPIKVDEDFYRQQYPDIVAA 101
Query: 415 FGSD-RGAAARHYITHGVKEGRNPDAFKALE 444
+ + +H+ G EGR P +L
Sbjct: 102 IEDNIFESGQQHFERSGFAEGRLPYPNFSLF 132
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGR 603
SI + D YL Y+D+ + AA+HY +G KE R
Sbjct: 39 SIRVDEDWYLARYEDVGRAIEAGFVNSAAEHYRLYGYKENR 79
>gi|197103956|ref|YP_002129333.1| hemolysin-type calcium-binding region protein [Phenylobacterium
zucineum HLK1]
gi|196477376|gb|ACG76904.1| hemolysin-type calcium-binding region protein [Phenylobacterium
zucineum HLK1]
Length = 636
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/318 (13%), Positives = 84/318 (26%), Gaps = 14/318 (4%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
+ AD+ +G +I +I G + G
Sbjct: 180 GGQGNDTVVGGAGADLLFGNMGNDSIGGGGGNDQIFGEDG------NDTVTANGGTVVVS 233
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ + + AT +DI+ + S G N Y
Sbjct: 234 GGNGADSITATGAAVNLQGNIGDDTLVATGAGNDILVGGQGNDILTASTGGNEYLNGNLG 293
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
D+ + D + +L+GG N + + SI G N +++ + +V
Sbjct: 294 DDTLTGGSGNDQLYGEAGADSLVGGDGNNTLIGGDGSDSITGGTGNDSVSGGNGSDVIVA 353
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS--------YLYKIYRFENAI 325
G + + NN SG+DV +G DT + N
Sbjct: 354 GDGVNTIDAGEGNNSITAGSGSDVITAGAGNDTVVANNGNNSVSVGDGANSVTAGTGNDT 413
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
I + D + + D + + + ++ G D ++
Sbjct: 414 ITSGSGNDTIDAGNGNNVISAGDGANSITAGTGNDNITSGSGNDTILSGTGADTIDAGDG 473
Query: 386 FYEFGLSEGRDITFDSYL 403
G D+
Sbjct: 474 ANSITADAGNDVITTGSG 491
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 58/495 (11%), Positives = 119/495 (24%), Gaps = 36/495 (7%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ + + +D G G T+ N + LG G
Sbjct: 77 DGSVLYVGSTGPDNGATSGGENSDGMYGGNGNDTLGGGNGADLLHGNLGDDSLNGGGGAD 136
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+YG D + + D +D S G T VQ +YG
Sbjct: 137 SIYGGQGDDDIVMGAGGFFGHGNLGDDSLDGSAGSATT--------VQWLYGGQGNDTVV 188
Query: 205 NIYK--------IEVQQKDSPFIQTIYDSGGDDLLDLTLI------GGVKNYIDLNTESW 250
I+ G+D + G + I +
Sbjct: 189 GGAGADLLFGNMGNDSIGGGGGNDQIFGEDGNDTVTANGGTVVVSGGNGADSITATGAAV 248
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN-VFFESSGNDVFDGSSGLDTFFY 309
+ G + +A + +VG GND++ ++ N + G+D G SG D Y
Sbjct: 249 NLQGNIGDDTLVATGAGNDILVGGQGNDILTASTGGNEYLNGNLGDDTLTGGSGNDQL-Y 307
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ N ++ + + + + V + ++
Sbjct: 308 GEAGADSLVGGDGNNTLIGGDGSDSITGGTGNDSVSGGNGSDVIVAGDGVNTIDAGEGNN 367
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G DV + + G +S + + G+D +
Sbjct: 368 SITAGSGSDVITAGAGNDTVVANNGN----NSVSVGDGANSVTAGTGNDTITS-----GS 418
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G + + + + G D + + +
Sbjct: 419 GNDTIDAGNGNNVISAGDGANSITAGTGNDNITSGSGNDTILSGTGADTIDAGDGANSIT 478
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
+ GS G + + + + +
Sbjct: 479 ADAGNDVITTGSGADVIL---GGDGNDVINSGAGNDVITGGLGKDVITGGAGADTFIFGN 535
Query: 550 GKDHFSNFGYEEGRS 564
G + G ++ R
Sbjct: 536 GDSGVTAGGIDQIRD 550
>gi|169146013|emb|CAQ13516.1| matrix metalloproteinase 14 (membrane-inserted) beta [Danio rerio]
Length = 621
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 53/195 (27%), Gaps = 39/195 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--- 74
++ W I + T ++ E R A W V L F E S
Sbjct: 107 IQGLKWDKNEITFCIQNYTPKVGEYETFE-------AIRKAFKVWESVTPLRFREISYSD 159
Query: 75 ------IHSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYG 113
+DI ++ + P + +
Sbjct: 160 IRDKVVDFADIMLFFADGFHGDASPFDGEGGFLAHAYFPGNGIGGDTHFDAAEPWTIGNK 219
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFM---PQD 170
G + A+HE+GHALG+ H P + Y+ V+ Q
Sbjct: 220 DLLGNDVFLVAVHELGHALGMEHSND-----PSAIMAPFYQWMETDHFVLPDDDRKGIQK 274
Query: 171 SMMDASFGYCATPMV 185
S G+ TP+
Sbjct: 275 LYGPGSGGHPRTPVT 289
>gi|300865386|ref|ZP_07110195.1| hypothetical protein OSCI_1680008 [Oscillatoria sp. PCC 6506]
gi|300336621|emb|CBN55345.1| hypothetical protein OSCI_1680008 [Oscillatoria sp. PCC 6506]
Length = 2055
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 45/191 (23%), Gaps = 30/191 (15%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L +SI ++TI + +S+ GS + GN + G+D G G
Sbjct: 1852 LTDGIDTSIPSSVLDLTIFALSGSDSLTGSELPNTYFGNQGEDNLVGKGGDDQLFGGKGS 1911
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D+ + ++ L
Sbjct: 1912 DSL--DGGIDNDFVSGNNGNDLLL--------------------------GGDGNDTLRG 1943
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ L G D+ F EG D YL + D +
Sbjct: 1944 GKQDDVLSGGAGNDLLNGDAGFDVLTGGEGNDTF--VLEYLPNNPDRADAIADFTSDDKI 2001
Query: 425 HYITHGVKEGR 435
I E
Sbjct: 2002 QLIGVTFSELT 2012
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 45/117 (38%), Gaps = 4/117 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
S T + + G+D L +G + + S+ G N ++ +
Sbjct: 1873 SGSDSLTGSELPNTYFGNQGEDNL----VGKGGDDQLFGGKGSDSLDGGIDNDFVSGNNG 1928
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ ++G GND + G ++V +GND+ +G +G D + + + N
Sbjct: 1929 NDLLLGGDGNDTLRGGKQDDVLSGGAGNDLLNGDAGFDVLTGGEGNDTFVLEYLPNN 1985
>gi|149913401|ref|ZP_01901934.1| RTX toxins and related Ca2+-binding protein [Roseobacter sp.
AzwK-3b]
gi|149812521|gb|EDM72350.1| RTX toxins and related Ca2+-binding protein [Roseobacter sp.
AzwK-3b]
Length = 1028
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 48/344 (13%), Positives = 86/344 (25%), Gaps = 14/344 (4%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA---LGLMHPGSYNG 142
G D + D D G I I + P +
Sbjct: 288 GGGNDQFYGDDGNDTLLGGDGHDTLVGGADADRIEGGAGDDLITFDNPFVDNEDPTTDGA 347
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA--TPMVSDIVAVQKIYGAPKG 200
G ++G ++ L + + D +D + T +D +
Sbjct: 348 GDMIFGGAEGALDNDTLDLRGAGPVTIDQQIDENDEGATKGTVTFADGSTLTFEGIETIL 407
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
S G+ + P + + G + + I G N
Sbjct: 408 SDGDGTVDGAETGEFMPVGYADTQGDVVTEGNDRIFGNGGDDDIRSGGGDDFIDGGTGND 467
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPS 313
I T + V+ G+D V G ++ +GND G G D F S
Sbjct: 468 NIFGGTGNDFVLAGDGDDTVRGREGDDYIDAGAGNDNIMGEDGDDVLRGRAGDDFVAGGS 527
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
I + +Y + DF+ ++ + L+
Sbjct: 528 GNDDILGEDGNDSLY--GDTGDDFIGGGAGDDIISDALEGFVGGGNDQFYGDDGNDTLLG 585
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
G D G D+ ++ + D + G
Sbjct: 586 GDGHDTLVGGADADRIEGGAGDDLITFDNPFVDNEDPTTDGAGD 629
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/325 (12%), Positives = 88/325 (27%), Gaps = 35/325 (10%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ GG N L + ++ G E + I ++++G G+DV+ G + ++ SG
Sbjct: 189 IFGGTGNDFVLAGDGDDTVRGREGDDYIDAGAGNDNIMGEDGDDVLRGRAGDDFVAGGSG 248
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND G G D+ + + + D +SD ++
Sbjct: 249 NDDILGEDGNDSLY-------------GDTGDDFIGGGAGDDIISD---------ALEGF 286
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ L+ G D G D+ ++ + D +
Sbjct: 287 VGGGNDQFYGDDGNDTLLGGDGHDTLVGGADADRIEGGAGDDLITFDNPFVDNEDPTTDG 346
Query: 415 FGS------DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
G + G + A+ + A +
Sbjct: 347 AGDMIFGGAEGALDNDTLDLRGAGPVTIDQQIDENDEGATKGTVTFADGSTLTFEGIETI 406
Query: 469 HFSNFGCEEGRFVT-FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
G +G F Y + D+ + G + R+ +
Sbjct: 407 LSDGDGTVDGAETGEFMPVGYADTQGDVVTEGNDRI------FGNGGDDDIRSGGGDDFI 460
Query: 528 EYIASHEDLINAFADAPDLVQAGKD 552
+ ++++ + L G D
Sbjct: 461 DGGTGNDNIFGGTGNDFVLAGDGDD 485
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/390 (13%), Positives = 96/390 (24%), Gaps = 36/390 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ---- 264
+ + + G+D ++G N IGG + I+
Sbjct: 230 GDDVLRGRAGDDFVAGGSGND----DILGEDGNDSLYGDTGDDFIGGGAGDDIISDALEG 285
Query: 265 --HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G GND ++G ++ + D +G +G D + P + +
Sbjct: 286 FVGGGNDQFYGDDGNDTLLGGDGHDTLVGGADADRIEGGAGDDLITFDNPFVDNEDPTTD 345
Query: 323 NAIIVYDANEHK---QDFL---------------SDVERLRFADQCIDSVNVKQRSILEY 364
A + D L + E + +E
Sbjct: 346 GAGDMIFGGAEGALDNDTLDLRGAGPVTIDQQIDENDEGATKGTVTFADGSTLTFEGIET 405
Query: 365 TASYEDLI---QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
S D G+ + ++EG D F + + F
Sbjct: 406 ILSDGDGTVDGAETGEFMPVGYADTQGDVVTEGNDRIFGNGGDDDIRSGGGDDFIDGGTG 465
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE--GR 479
+ G D + + + + + + G D ++
Sbjct: 466 NDNIFGGTGNDFVLAGDGDDTVRGREGDDYIDAGAGNDNIMGEDGDDVLRGRAGDDFVAG 525
Query: 480 FVTFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 538
D L D L G D G A I EG ++ L+
Sbjct: 526 GSGNDDILGEDGNDSLYGDTGDDFIGGGAGDDIISDALEGFVGGGNDQFYGDDGNDTLLG 585
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
+ A D G ITF+
Sbjct: 586 GDGHDTLVGGADAD--RIEGGAGDDLITFD 613
Score = 44.0 bits (102), Expect = 0.080, Method: Composition-based stats.
Identities = 40/357 (11%), Positives = 92/357 (25%), Gaps = 16/357 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ---- 264
+ + + G+D ++G N IGG + I+
Sbjct: 510 GDDVLRGRAGDDFVAGGSGND----DILGEDGNDSLYGDTGDDFIGGGAGDDIISDALEG 565
Query: 265 --HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G GND ++G ++ + D +G +G D + P + +
Sbjct: 566 FVGGGNDQFYGDDGNDTLLGGDGHDTLVGGADADRIEGGAGDDLITFDNPFVDNEDPTTD 625
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
A + D + L +++ + E G FE
Sbjct: 626 GAGDMIFGGAEG---ALDNDTLDLRGAGPVTIDQQIDENDEGATKGTVTFADGGTLTFEG 682
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
++ G + + D + + S+ +T N
Sbjct: 683 IETILSDGEANAAPVAVDDAAVVLEDGSVTIDVLSNDVDPEEDPLTVTQASAENGTVTVN 742
Query: 443 LEYIASHEDLINAFADA--PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
+ + F + G + D+ + G+ D +
Sbjct: 743 DDNSLEYTPDPGFFGTDIITYEISDGFGNTDTGEVTVEVEEVPDAPVVDGTAGDDVLLSD 802
Query: 501 SDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
+ T G+ + + ++ A + ++ + G D +
Sbjct: 803 FVDEDGDQIDGTDGLNDTIDAGPGNDFVDGGAGDDTFLDNAGNDVYFGNEGNDTYVA 859
Score = 41.7 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 50/168 (29%), Gaps = 3/168 (1%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW---SSIG 254
+ ++ ++ +D S
Sbjct: 745 NSLEYTPDPGFFGTDIITYEISDGFGNTDTGEVTVEVEEVPDAPVVDGTAGDDVLLSDFV 804
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ + + +++ GND V G + ++ F +++GNDV+ G+ G DT+
Sbjct: 805 DEDGDQIDGTDGLNDTIDAGPGNDFVDGGAGDDTFLDNAGNDVYFGNEGNDTYVAQDTGN 864
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
++ E V + + D + VE + + +
Sbjct: 865 VFVTVSQEGNGQVQNVPSGEVDEVFSVESFVAGEDESGFDGIAFDEAI 912
>gi|114652047|ref|XP_001157506.1| PREDICTED: matrix metalloproteinase 14 isoform 1 [Pan troglodytes]
Length = 589
Score = 64.0 bits (154), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 121 IQGLKWQHNEITFCIQNYTPKVGEY-------ATYEAIRKAFRVWESATPLRFREVPYAY 173
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 174 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 233
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 234 DLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 275
>gi|163739150|ref|ZP_02146562.1| type I secretion target repeat protein [Phaeobacter gallaeciensis
BS107]
gi|161387550|gb|EDQ11907.1| type I secretion target repeat protein [Phaeobacter gallaeciensis
BS107]
Length = 359
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 78/236 (33%), Gaps = 17/236 (7%)
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAV--QKIYGAPKGSLGNNIY---KIEVQQK 214
++ D + T D+ + + A +G +G++
Sbjct: 126 DAMNIAGQETPVGTDGNDVLAGTVGSDDVRLMNGDDAFAAGQGDIGDDTIRGGSGNDTIN 185
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ G+DLL + GG + + + + ++ G + + +
Sbjct: 186 GGSGQDVLFGGSGEDLLRGGWGSDLMKGGRQADVLIGAQGHDTVYGEGGADRLDGGSGND 245
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+VG SG+D ++G + + F +GND G + D F + I F
Sbjct: 246 RLVGGSGHDTILGGAGIDRLFGGNGNDSLVGGAQADYFIFRGNFGDDTIRGFAA-----L 300
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL--EYTASYEDLIQVIGQDVFESM 383
++ K D E +D + + + + + + L+ V D+
Sbjct: 301 SDAEKIDLRGVSEISDLSDLRDNHLTQDGSNAIIADGLGNTITLLGVDINDLDAGD 356
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 43/160 (26%), Gaps = 28/160 (17%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESS---------------------GNDVFD 299
I+ T++ + +G + +G N+V + G+D
Sbjct: 117 GISTGTLVVDAMNIAGQETPVGTDGNDVLAGTVGSDDVRLMNGDDAFAAGQGDIGDDTIR 176
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNV 356
G SG DT S ++ ++ D + + L A
Sbjct: 177 GGSGNDTI--NGGSGQDVLFGGSGEDLLRGGW--GSDLMKGGRQADVLIGAQGHDTVYGE 232
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
L+ + + L+ G D G D
Sbjct: 233 GGADRLDGGSGNDRLVGGSGHDTILGGAGIDRLFGGNGND 272
>gi|115899460|ref|XP_780356.2| PREDICTED: similar to membrane-type matrix metalloproteinase 1
alpha [Strongylocentrotus purpuratus]
gi|115949328|ref|XP_001190547.1| PREDICTED: similar to membrane-type matrix metalloproteinase 1
alpha [Strongylocentrotus purpuratus]
Length = 489
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 49/196 (25%), Gaps = 48/196 (24%)
Query: 31 KPDVLTTHRLSFDITELNPNAQEV-----ARWALGEWSKVVDLTFEET-SIHSDIKFISS 84
D +++ I P+ E A WS V LTF + DI S
Sbjct: 86 SGDKWDHQEITYRILNFTPDLTEAEVVDSFERAFKVWSDVTPLTFRRVFDVPGDIHIQFS 145
Query: 85 NN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
+ P + + T L A HE G
Sbjct: 146 EYDHGDGVAFDGLGGTLAHAYFPGGSIGGDAHFDDSEIFSVFLSDDDKTDLFMVAAHEFG 205
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
H+LGL H + + V D + D+
Sbjct: 206 HSLGLGHSSDIHALMAPFYVGYDPG--------------------------FSLGYDDLH 239
Query: 190 AVQKIYGAPKG-SLGN 204
+Q IYG G+
Sbjct: 240 GIQSIYGINSSPRPGD 255
>gi|114327407|ref|YP_744564.1| glycosyltransferase [Granulibacter bethesdensis CGDNIH1]
gi|114315581|gb|ABI61641.1| glycosyltransferase [Granulibacter bethesdensis CGDNIH1]
Length = 1211
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSYDDLWN 581
F A Y+ +++DL ++ P + H+ +G +E R F+ Y+ Y D +
Sbjct: 441 FDARWYLDTYQDLDSS-KTDPVI------HYILYGTQEERDPGPDFSTTFYIRRYPDSIS 493
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGISG 609
A +HY HG E R + S
Sbjct: 494 A----GLTALEHYELHGRSEQRQIAPSS 517
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 12/87 (13%)
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLIN 538
FD+ YL +Y DL + + HYI +G +E R+P F YI + D I+
Sbjct: 438 SPLFDARWYLDTYQDLDSS----KTDPVIHYILYGTQEERDPGPDFSTTFYIRRYPDSIS 493
Query: 539 AFADAPDLVQAGKDHFSNFGYEEGRSI 565
A +H+ G E R I
Sbjct: 494 A-------GLTALEHYELHGRSEQRQI 513
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 13/91 (14%)
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSY 492
++ F A Y+ +++DL ++ D H+ +G +E R F + Y+ Y
Sbjct: 436 KDSPLFDARWYLDTYQDLDSSKTDPVI-------HYILYGTQEERDPGPDFSTTFYIRRY 488
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
D + + A HY HG E R
Sbjct: 489 PDSISAGLT----ALEHYELHGRSEQRQIAP 515
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 12/88 (13%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
FD+ YL +Y DL S + HYI +G +E R+P F YI + D I
Sbjct: 437 DSPLFDARWYLDTYQDL----DSSKTDPVIHYILYGTQEERDPGPDFSTTFYIRRYPDSI 492
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+A +H+ G E R +
Sbjct: 493 SAGLT-------ALEHYELHGRSEQRQI 513
Score = 40.9 bits (94), Expect = 0.65, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 563 RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
S F+ YL +Y DL S ++ HYI +G +E R G
Sbjct: 437 DSPLFDARWYLDTYQDLD----SSKTDPVIHYILYGTQEERDPGP 477
>gi|30249346|ref|NP_841416.1| glycosyl transferase family protein [Nitrosomonas europaea ATCC
19718]
gi|30180665|emb|CAD85281.1| Glycosyl transferase, family 2 [Nitrosomonas europaea ATCC 19718]
Length = 1217
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 13/86 (15%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS--ITFNPDLYLTSY 576
R F A Y + ++ + P DH+ G EG++ F+ YL +
Sbjct: 257 RQCSWFDAAWYFTQYPEVRES-GADP------VDHYFYHGAAEGKNPGPFFDTSRYLEQH 309
Query: 577 DDLWNVFGSDRSAAAQHYITHGMKEG 602
++ HY+ G EG
Sbjct: 310 PEIL----ETDLNPLLHYVEIGFYEG 331
Score = 54.0 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 12/81 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
FD+ Y Y ++R HY HG EG+NP F Y+ H +++
Sbjct: 262 FDAAWYFTQYPEVRESG----ADPVDHYFYHGAAEGKNPGPFFDTSRYLEQHPEILETDL 317
Query: 542 DAPDLVQAGKDHFSNFGYEEG 562
+ H+ G+ EG
Sbjct: 318 NPLL-------HYVEIGFYEG 331
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 12/85 (14%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 457
FD+ Y Y ++R HY HG EG+NP F Y+ H +++
Sbjct: 262 FDAAWYFTQYPEVR----ESGADPVDHYFYHGAAEGKNPGPFFDTSRYLEQHPEILETDL 317
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVT 482
+ H+ G EG
Sbjct: 318 NPLL-------HYVEIGFYEGLKAD 335
Score = 42.5 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Query: 567 FNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGI 607
F+ Y T Y ++ + HY HG EG+ G
Sbjct: 262 FDAAWYFTQYPEVR----ESGADPVDHYFYHGAAEGKNPGP 298
>gi|62955747|ref|NP_001017890.1| matrix metallopeptidase 23bb [Danio rerio]
gi|62203239|gb|AAH92954.1| Matrix metallopeptidase 23a, like [Danio rerio]
gi|182890478|gb|AAI64476.1| Mmp23al protein [Danio rerio]
Length = 377
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 60/204 (29%), Gaps = 61/204 (29%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH--- 76
W ++ + YK D ++ A +WS V LTF E +
Sbjct: 65 GYRWEHFNVSYKITKFPNTLNKDD-------TRKAISIAFTKWSDVSPLTFTEITNTSKS 117
Query: 77 SDIKFISSNNGYVC------TPRYDSRYF----------MEINFDKADVWRYGIGK---- 116
+DI + P +D EI+FD + W G +
Sbjct: 118 ADITIGFYTYNHTDCWRSPLHPCFDGLNGELAHAFLPPRGEIHFDNHEFWILGKSRFSWK 177
Query: 117 ----GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
L A HEIGHALGL H N Y ++
Sbjct: 178 QGVWLNDLVQVAAHEIGHALGLWHSQDPNALMHPNAT---------------YTGQRNIA 222
Query: 173 MDASFGYCATPMVSDIVAVQKIYG 196
D DI +Q++YG
Sbjct: 223 QD------------DIWGIQRLYG 234
>gi|332976281|gb|EGK13142.1| hypothetical protein HMPREF9373_1351 [Psychrobacter sp. 1501(2011)]
Length = 1300
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/233 (15%), Positives = 74/233 (31%), Gaps = 5/233 (2%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ-KIYGA 197
+ Y + ++ LT +S D S + +D + Y
Sbjct: 1031 DNDWQYKLPQNAFTDADNDVLTYKLSMVDGSDVPAGLSIDVSTGEITADATQLVAHGYRG 1090
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS-SIGGY 256
+ + S + + D + + IG + I + S +I G
Sbjct: 1091 SAVYDIQITAVDDDGLEVSSATKLVVDDSVINANGCSTIGSWSDDIIVAQNDDSHNIYGL 1150
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N + +S++G GND ++G+ N+ GND+ G +G DT Y
Sbjct: 1151 IGNDLLIGGNGKDSLIGGLGNDELVGHGGNDCLDGGIGNDILVGGNGNDTLKGGLGDDTY 1210
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ + ++ D + + L+ +D +D + +
Sbjct: 1211 VFTKGDGKDLIMDLSGNDTLDLTS---FTLSDIVVDRHGSDLVIQFDGQQANN 1260
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 20/92 (21%), Gaps = 3/92 (3%)
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
L + L + + L + L IG D+ G D
Sbjct: 1150 LIGNDLLIGGNGKDSLIGGLGNDELVGHGGNDCLDGGIGNDILVGGNGNDTLKGGLGDDT 1209
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G DL + +
Sbjct: 1210 YVFTK---GDGKDLIMDLSGNDTLDLTSFTLS 1238
>gi|301781262|ref|XP_002926043.1| PREDICTED: matrix metalloproteinase-14-like [Ailuropoda
melanoleuca]
Length = 582
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 113 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 165
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 166 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 225
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 226 DVNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 267
>gi|113476970|ref|YP_723031.1| hemolysin-type calcium-binding protein [Trichodesmium erythraeum
IMS101]
gi|110168018|gb|ABG52558.1| Hemolysin-type calcium-binding region [Trichodesmium erythraeum
IMS101]
Length = 1175
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 54/167 (32%), Gaps = 12/167 (7%)
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIY---KIEVQQKDSPFIQTIYDSGGDDLLDLTL 235
T + + A Q + G P G++ + ++ GG+D ++
Sbjct: 925 VSGTTTIYEFTANQTLQGIP----GDDDLIGGTGNDKINGLGGNDSLSGLGGNDTINGAD 980
Query: 236 IGGV-----KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ + + + G +N TI ++++G GND ++G ++
Sbjct: 981 GNDDIKGNRGDDRLIGGKGRDRLNGGYENDTIFGGHGDDTLIGRLGNDQMLGGKGEDILR 1040
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
G D +G +G D A + + DF
Sbjct: 1041 GGQGRDRLNGGAGNDILTGDASIDRFIFAANSKFSQANLGVDEITDF 1087
Score = 41.7 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 23/180 (12%), Positives = 42/180 (23%), Gaps = 11/180 (6%)
Query: 307 FFYYAPSYLYKIYRFENAIIVYD-ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
S IY F + + + +++ + +
Sbjct: 920 VVANEVSGTTTIYEFTANQTLQGIPGDDDLIGGTGNDKINGLGGNDSLSGLGGNDTINGA 979
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+D+ G D K D F + D L G+D+ +
Sbjct: 980 DGNDDIKGNRGDDRLIGGKGRDRLNGGYENDTIFGGHGD----DTLIGRLGNDQMLGGK- 1034
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
G R L A + D++ A + FS F+
Sbjct: 1035 ----GEDILRGGQGRDRLNGGAGN-DILTGDASIDRFIFAANSKFSQANLGVDEITDFNP 1089
Score = 41.3 bits (95), Expect = 0.54, Method: Composition-based stats.
Identities = 16/159 (10%), Positives = 30/159 (18%), Gaps = 4/159 (2%)
Query: 322 ENAIIVYDANEHKQDF----LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
++ ANE + + L+ D + + + L + G
Sbjct: 914 NGEALLVVANEVSGTTTIYEFTANQTLQGIPGDDDLIGGTGNDKINGLGGNDSLSGLGGN 973
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D + + G D N G +
Sbjct: 974 DTINGADGNDDIKGNRGDDRLIGGKGRDRLNGGYENDTIFGGHGDDTLIGRLGNDQMLGG 1033
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
L + L + D F
Sbjct: 1034 KGEDILRGGQGRDRLNGGAGNDILTGDASIDRFIFAANS 1072
Score = 39.4 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 38/260 (14%), Positives = 59/260 (22%), Gaps = 40/260 (15%)
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK 334
SG + +AN G+D G +G D + +
Sbjct: 926 SGTTTIYEFTANQTLQGIPGDDDLIGGTGNDKI--NGLGGNDSLSGLGGNDTI------- 976
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
++ + LI G+D G
Sbjct: 977 -------------------NGADGNDDIKGNRGDDRLIGGKGRDRLNGGYENDTIFGGHG 1017
Query: 395 RDIT-----FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
D D L D LR G DR + F A +
Sbjct: 1018 DDTLIGRLGNDQMLGGKGEDILRGGQGRDRLNGGAGNDILTGDASIDRFIFAANSKFSQA 1077
Query: 450 E---DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR---NVFGSDR 503
D I F DL+ + F+ G + D + + S D + +
Sbjct: 1078 NLGVDEITDFNPDLDLILLDLKTFTEITTASGENIG-DEFATVESKGDAATSDAIIVYNS 1136
Query: 504 GAAARHYITHGVKEGRNPDA 523
Y +G G
Sbjct: 1137 NNGTLFYNANGTTNGFGDGG 1156
Score = 39.0 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 68/277 (24%), Gaps = 45/277 (16%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S+ N+ E + G + ++ N S +D + T
Sbjct: 788 GGRSFSLWDAAGNLVFDSGDAFERITGKDFPNNFNSDNDENSLDTRS-DDKGAEPEAITT 846
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANE----------HKQDFLSDVERLRFAD-------- 348
+Y + I+VYD +E + +DF +DVE D
Sbjct: 847 GVLDDKTYAFIGLERIGGIMVYDVSEPTEPSFVQYINNRDFTADVETSAVGDLGPEGLKF 906
Query: 349 --------------------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
L+ +DLI G D +
Sbjct: 907 ISPEDSPNGEALLVVANEVSGTTTIYEFTANQTLQGIPGDDDLIGGTGNDKINGLGGNDS 966
Query: 389 FGLSEGRDITFDS---YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
G D + G+ D R + G R Y + G L
Sbjct: 967 LSGLGGNDTINGADGNDDIKGNRGDDRLIGGKGRDRLNGGYENDTIFGGHGD---DTLIG 1023
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
++ ++ + G+D + +
Sbjct: 1024 RLGNDQMLGGKGEDILRGGQGRDRLNGGAGNDILTGD 1060
>gi|327269120|ref|XP_003219343.1| PREDICTED: matrix metalloproteinase-27-like [Anolis carolinensis]
Length = 437
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 54/167 (32%), Gaps = 30/167 (17%)
Query: 31 KPDVLTTHRLSFDITELNPNAQEV-----ARWALGEWSKVVDLTFEET-SIHSDIKFISS 84
++L++ I P+ ++ + A WS V LTF +DI +
Sbjct: 74 ASPGWKKNKLTYRIVNYTPDMRQADVATAIQKAFEVWSAVTPLTFRRVHKERADITIEFA 133
Query: 85 NN----------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
G+ P R I+FD+ + W + + L A HEI
Sbjct: 134 TRVHGRCPRHFDGPLGVLGHAFPPNNPFR--GNIHFDEDESWTARLAEFN-LWLVAAHEI 190
Query: 129 GHALGLMHPGS-----YNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
GHALGL H Y P+ D D Y +
Sbjct: 191 GHALGLAHSDDPRALMYPNYKPIDPEDFLLSQDDIEGIQAIYGPSLN 237
>gi|163851832|ref|YP_001639875.1| hypothetical protein Mext_2409 [Methylobacterium extorquens PA1]
gi|163663437|gb|ABY30804.1| hypothetical protein Mext_2409 [Methylobacterium extorquens PA1]
Length = 15831
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 72/539 (13%), Positives = 129/539 (23%), Gaps = 48/539 (8%)
Query: 66 VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+D + D G G +L +
Sbjct: 12840 AGSDVVTALGGNDAVIGDGGYAEFEAGTRVVFVSADATGAGNDRIAVGDGDNVVLGGSGT 12899
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
I G ++ + + +
Sbjct: 12900 DTIT----TGSGADVVLGDNGTIRFAGGIRLEIVSDRIGGASDTITTGAGADLVLGGLGG 12955
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVK 240
I A Q A N + GG+D + D +IGG
Sbjct: 12956 DTIDAGQADTDADIVFGDNGHVTFDATGGVVRAESFDAGFGGNDEIKVGDGDNLVIGGTG 13015
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG---SSGNDVVIGNSANNVFFESSGNDV 297
+ + G + A +E GND + +N+ SG+D
Sbjct: 13016 ADVITALGGNDIVLGDQGYALFAAGVRVEVASTETSDGGNDRIEVGDGDNLVIGGSGSDT 13075
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
SG D +++ + + N
Sbjct: 13076 VTTGSGADVVLGDNGLATFELGIRT--------------------------RIVSDRNGG 13109
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--ITFDSYLYLGSYDDLRNVF 415
R + A + ++ +G D ++ + + + G D ITFD+ + + L F
Sbjct: 13110 ARDTITTGAGADVVLGGLGADTIDAGQADSDADVVFGDDGQITFDAQGRVKRAETLDVGF 13169
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
G D + N D A +A V+ ++ G
Sbjct: 13170 GDDDEIKVGGGDNLVIGGAGNDVVTALGGNDVVIGDHGYAVFEAGVRVEFASTDTTDAGN 13229
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVF-------GSDRGAAARHYITHGVKEGRNPDAFKALE 528
+ D+ GS D G + I V+ R+ L
Sbjct: 13230 DRIEAGDGDNIALGGSGSDTVVTGTGGDIVLGDNGLVRFERGIRAVVQSSRDGGTRDVLR 13289
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDR 587
A + ++ ++GR +TF+ L + L FG D
Sbjct: 13290 SGAGADVVLGGLGADTIDAGRDDADADIVLGDDGR-LTFDAQGRLKRAESLDPTFGDDD 13347
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/377 (13%), Positives = 81/377 (21%), Gaps = 50/377 (13%)
Query: 226 GGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV---VGSSGN 277
G DD +D+ GG + + G + A +E GN
Sbjct: 12707 GDDDTIDVGGGDNLVIGGTGADVITALGGNDIVLGDQGYALFAAGVRVEVASTETNDGGN 12766
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY-----------RFENAII 326
D + +NV S ND +G D ++ F
Sbjct: 12767 DRIETGDGDNVVLGGSRNDTITTGAGADLVLGDDGRATFETSGRVKRAESFDLGFGGNDT 12826
Query: 327 VYDANEHKQDFLSD----VERLRFADQCIDSVNVK---------QRSILEYTASYEDLIQ 373
+ V L D I S A + +
Sbjct: 12827 IDVGAGDNVVIAGAGSDVVTALGGNDAVIGDGGYAEFEAGTRVVFVSADATGAGNDRIAV 12886
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G +V G D+ + +R SDR A IT G
Sbjct: 12887 GDGDNVVLGGSGTDTITTGSGADVVLGDNGTIRFAGGIRLEIVSDRIGGASDTITTGAGA 12946
Query: 434 G--RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
++ + D F D + + F D
Sbjct: 12947 DLVLGGLGGDTIDAGQADTDADIVFGDNGHVTFDATGGVVRAESFDAGFGGNDEIKVGDG 13006
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNP----------------DAFKALEYIASHED 535
+ + G+D A +G +E
Sbjct: 13007 DNLVIGGTGADVITALGGNDIVLGDQGYALFAAGVRVEVASTETSDGGNDRIEVGDGDNL 13066
Query: 536 LINAFADAPDLVQAGKD 552
+I +G D
Sbjct: 13067 VIGGSGSDTVTTGSGAD 13083
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 64/469 (13%), Positives = 121/469 (25%), Gaps = 50/469 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + V + F + R G TI + + LG
Sbjct: 12896 GSGTDTITTGSGADVVLGDNGTIRFAGGIRLEIVSDRIGGASDTITTGAGADLVLGGLG- 12954
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI------ 188
+ + G D + ++ +T + + + DA FG V D
Sbjct: 12955 --GDTIDAGQADTDADIVFGDNGHVTFDATGGVVRAESFDAGFGGNDEIKVGDGDNLVIG 13012
Query: 189 ---VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
V G LG+ Y + T GG+D +++ G N +
Sbjct: 13013 GTGADVITALGGNDIVLGDQGYALFAAGVRVEVASTETSDGGNDRIEV---GDGDNLVIG 13069
Query: 246 NTESWSSIGGYEKNMTIAQH----------TVIESVVGSSGNDVVIGNSANNVFFESSGN 295
+ S + G ++ + + T I S D + + +V G
Sbjct: 13070 GSGSDTVTTGSGADVVLGDNGLATFELGIRTRIVSDRNGGARDTITTGAGADVVLGGLGA 13129
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D D + + + + + D + ++ +
Sbjct: 13130 DTIDAGQADSDADVVFGDDGQITFDAQGRVKRAETLDVG---FGDDDEIKVGGGDNLVIG 13186
Query: 356 VKQRSILEYTASYEDLIQV---------------------IGQDVFESMKH-FYEFGLSE 393
++ + +I G D E+ G S
Sbjct: 13187 GAGNDVVTALGGNDVVIGDHGYAVFEAGVRVEFASTDTTDAGNDRIEAGDGDNIALGGSG 13246
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
+ + + D+ F A + G ++ A + D I
Sbjct: 13247 SDTVVTGTGGDIVLGDNGLVRFERGIRAVVQSSRDGGTRDVLRSGAGADVVLGGLGADTI 13306
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+A D D V D +GR +S DD+ G D
Sbjct: 13307 DAGRDDADADIVLGDDGRLTFDAQGRLKRAESLDPTFGDDDVIEAGGGD 13355
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 52/387 (13%), Positives = 97/387 (25%), Gaps = 23/387 (5%)
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM-HPGSYNGGYPVYGVD 150
P + +E +V G G TI + I G G + D
Sbjct: 13341 PTFGDDDVIEAGG-GDNVVIGGAGTDTITALGGNDVILGDNGTALFDGGVRVAFTSTDPD 13399
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG-APKGSLGNNIYKI 209
+ + + + D + G A ++ D+ V G + +
Sbjct: 13400 DGARDVIKAGDGDNVVIGSAGSDDITTGSGADIVLGDMGVVTFENGLVREVYTTDERRGA 13459
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ ++ G D + T G D S++ +
Sbjct: 13460 GDVIRGGDGDNIVFGGAGRDEI-TTGKGADLILGDFGEASFTGGRLVRGATLNPNRGDDD 13518
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++V G++V++G ++ SG DV G +GL TF L + E
Sbjct: 13519 TIVAGDGDNVILGGFGSDTITAGSGADVVLGDNGLATFRTDGKRILVRTTDVEIGGTDTI 13578
Query: 330 ANEHKQDFLSD------VERLRFADQCIDSVNVKQRSIL----------EYTASYEDLIQ 373
A + + + AD + + +
Sbjct: 13579 AAGDGDNLALGGVDADTITTGKGADVILGDFGSVSYDAAGLLTQVLSTDTGLGGNDTIAA 13638
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSY---LYLGSYDDLRNVFGSDRGAAARHYITHG 430
G D +G Y L GAA + +G
Sbjct: 13639 DDGSDTILGGFGSDTITAGDGAKTVLGDSGQLDYAAGVLTLAQSLTPALGAADTIKLGNG 13698
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFA 457
K ++ + +I
Sbjct: 13699 RKLVIGGAGSDLVDGGSGDAIVIGDAG 13725
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/357 (14%), Positives = 88/357 (24%), Gaps = 23/357 (6%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T++ G D + +D SI + +
Sbjct: 14281 GGDTIVTGAGRDTVFGDAGQVRFDAKGLVERAESLDTGIGGDDSIEAGAGDNLVIAGVGA 14340
Query: 269 ESVVGSSGNDVVIGNSANNVFFES------------SGNDVFDGSSGLDTFFYYAPSYLY 316
+++ GND V+G++ VF G D G D
Sbjct: 14341 DTITTLGGNDAVLGDNGVAVFAGGVRVSFATTAPTDGGKDTLLLGDG-DNLALGGADADT 14399
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+I+ D D + ++ D + ++E A ++ G
Sbjct: 14400 ITTGIGADVILGDFGSISYDAAGLLTQVLSTD-----TGLGGDDVIEAGAGDNLVLGGFG 14454
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
D + G + L D A I G +
Sbjct: 14455 ADTITTEIGADVILGDSGEVLYAGGRLVQARSLDAGIGGRDAIKAGEGANIVIGGMDADV 14514
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
+ + I L+ AD L Q + G + R D+ + G D
Sbjct: 14515 IETGSGRDVILGDSGLVRRDADG--LAQAVSTGTALGGDDTIRAGEGDNLVLGGFGSDTI 14572
Query: 497 NVF-GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G+D + AL + + + D L G D
Sbjct: 14573 DTGAGADIVLGDSGEARFERGLIASVTTLDALNG--AGDTIRAGEGDNIVLGGLGGD 14627
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/198 (12%), Positives = 46/198 (23%), Gaps = 18/198 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T++ G D + +D +I + +
Sbjct: 13879 GGDTIVTGSGRDTVFGDAGQVRFDAKGLVERAESLDTAIGGDDTIEAGAGDNLVVGGAGA 13938
Query: 269 ESVVGSSGNDVVIGNSANNVFFES------------SGNDVFDGSSGLDTFFYYAPSYLY 316
+ V GND V+G++ VF G D G D
Sbjct: 13939 DKVTTLGGNDAVLGDNGVAVFAGGVRVSLATTAPVDGGKDTLLLGDG-DNLALGGADADT 13997
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+I+ D D + ++ D + + + ++ G
Sbjct: 13998 ITTGNGADVILGDFGSFSYDAAGLLAQILSTDTAL-----GGSDTITAGDGSDTILGGFG 14052
Query: 377 QDVFESMKHFYEFGLSEG 394
D + G
Sbjct: 14053 SDTITASDGAKTVLGDSG 14070
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 51/416 (12%), Positives = 109/416 (26%), Gaps = 24/416 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + F + + AD+ G+G TI + + +G
Sbjct: 11985 DNGSVIFAGGIRLEAKSDLSGGARDTIVTGAGADLVIGGLGGDTIDAGKLDADDDIVIGD 12044
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA---- 190
+++ V + S+ + + A T +D+V
Sbjct: 12045 SGHITFDELGRVIRAEATDPTAGGDDSIDAGDGNNIVLGGAGSDTITTGAGADVVLGDNG 12104
Query: 191 -VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
V G + + + I G D +D + + + +
Sbjct: 12105 FVTFTGGIRLEAKSDLAGGARDTIRAGAGTDLIIGGLGGDTIDAGKLDADDDIVFGDNGH 12164
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ + + S G+D + S NN+ +G+D+ +G D
Sbjct: 12165 VTFDELGRVKLAQSLDP------TSGGDDSIEAGSGNNIVLGGAGSDIITTGAGADVV-- 12216
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
F I + + + AD + + + A +
Sbjct: 12217 ---LGDNGAVTFAGGIRLELTSGRDGGTGDTITTGAGADLVLGGLGADTIDAGKNDADAD 12273
Query: 370 DLIQVIGQDVFESM-----KHFYEFGLSEGRDITF---DSYLYLGSYDDLRNVFGSDRGA 421
+ G F+ +FGL + I D+ + G+ D G +
Sbjct: 12274 IVFGDNGHVTFDGQGRVKRAESLDFGLGDDDSIDVGGGDNIVVGGTGADRITALGGNDVV 12333
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
G+ A ++ + D + G D + G +
Sbjct: 12334 LGDDGRATFETSGQVQRAESFDLGFGGNDTIDVGPGDNVVIAGAGSDVVTALGGND 12389
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 71/563 (12%), Positives = 126/563 (22%), Gaps = 93/563 (16%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWR-YGIGKGTILSHNALHEIGHALG 133
+ + + F++ +A R G G+ TI++ + LG
Sbjct: 11849 GSGSDTITTGIGADLVFGDNGAVDFVDGVLREALSERVGGGGRDTIVTGAGADLVIGGLG 11908
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ V D + +F ++ A
Sbjct: 11909 GDTIDAGKDDTDADIVFGDNGHITFDALGRVSLAESVDPTLGGDDEI----LAGAGANLI 11964
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
+ GA + I ++ +GG L + + G + +
Sbjct: 11965 LGGAGS----DTITTGAGADIVLGDNGSVIFAGGIRLEAKSDLSGGARDTIVTGAGADLV 12020
Query: 254 GGYEKNMTIAQH---TVIESVVGSS----------------------GNDVVIGNSANNV 288
G TI + V+G S G+D + NN+
Sbjct: 12021 IGGLGGDTIDAGKLDADDDIVIGDSGHITFDELGRVIRAEATDPTAGGDDSIDAGDGNNI 12080
Query: 289 FFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSD- 340
+G+D +G D + L D +
Sbjct: 12081 VLGGAGSDTITTGAGADVVLGDNGFVTFTGGIRLEAKSDLAGGARDTIRAGAGTDLIIGG 12140
Query: 341 -------------VERLRFAD-----------------------QCIDSVNVKQRSILEY 364
+ + F D +I+
Sbjct: 12141 LGGDTIDAGKLDADDDIVFGDNGHVTFDELGRVKLAQSLDPTSGGDDSIEAGSGNNIVLG 12200
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSE------GRDITFDSYLYLGSYDD-LRNVFGS 417
A + + G DV F GRD + G+ D + G+
Sbjct: 12201 GAGSDIITTGAGADVVLGDNGAVTFAGGIRLELTSGRDGGTGDTITTGAGADLVLGGLGA 12260
Query: 418 DRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
D A ++ + G N F + E L D + G D+ G
Sbjct: 12261 DTIDAGKNDADADIVFGDNGHVTFDGQGRVKRAESLDFGLGDDDSIDVGGGDNIVVGGTG 12320
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
R + DD R F + G ++ +
Sbjct: 12321 ADRITALGGNDVVL-GDDGRATFETSGQVQRAESFDLGF------GGNDTIDVGPGDNVV 12373
Query: 537 INAFADAPDLVQAGKDHFSNFGY 559
I G D G
Sbjct: 12374 IAGAGSDVVTALGGNDAVIGDGG 12396
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 51/474 (10%), Positives = 106/474 (22%), Gaps = 20/474 (4%)
Query: 96 SRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
D G G I H I L G +
Sbjct: 11243 GGNDTIKAADGDTTIIGGAGSDGIDVGAGNHVI-----LGDSGKARFSAGALVSIESIDP 11297
Query: 156 DSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
++ +++ + T V + + I + +
Sbjct: 11298 AIGGDDTVTAKDGNVTVIGGAGADQITLGKGTQVVLGDS--GSATFVDGIIATVTSTATE 11355
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV-IESVV-G 273
TI + GD + L G + I + + +G K + IES+
Sbjct: 11356 IGGNDTIAATEGDTTI---LGGAGADTIKVGAGNHVILGDSGKAVFRNGRAQRIESITPE 11412
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G D++ + +G D +G + + + A
Sbjct: 11413 VGGADIITAEDGASRIIGGAGGDTITTGAGNHVILGDSGEADFTVTVTNGVTTSVLARIA 11472
Query: 334 KQD-FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK------HF 386
+ + + F + + ++ G F+++ F
Sbjct: 11473 TTAPSIGGSDTITFGAGNNVVLGGMGGDTIRGGDKGAVILGDNGIVTFDALGLIQRALSF 11532
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
+ D + + D + ++
Sbjct: 11533 DTAIGGDDTITIGDGNNVVLGGTGRDTITIGDGNNVVLGDSGQADFQAGIIVEIASISPE 11592
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+D I + ++ G G + + + LG R
Sbjct: 11593 VGDKDTIALGSGRNTVIGGAGGDSITAGLRNGVKLGTGTNVILGDAGHARLTTAGLPIVV 11652
Query: 507 ARHYITHGVKEGRNPDAFKALEYIASHED-LINAFADAPDLVQAGKDHFSNFGY 559
Y G + A+ S D + + L G+ F G
Sbjct: 11653 ESTYDNVGGDDTITVGDGVAVILGGSGSDIVAAGDGRSTVLGDNGQATFDAQGR 11706
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 43/357 (12%), Positives = 87/357 (24%), Gaps = 51/357 (14%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG--------GDDLLDLTLIGGVKNYIDLNT 247
GA ++ TI +G GD D +
Sbjct: 10624 GADTVTVTGTAIGTLTAIHAGGGADTITVTGSQGTLALFGDTTADGSRYDSTFEKQTGRG 10683
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G +++ T+ I G++G ++ G + N+ G ++ G +G DT
Sbjct: 10684 YGFRDEGTLDRDNTVVSLNDIIDASGATGLVIIDGGAGNDTITGGKGRNIIAGGTGNDTI 10743
Query: 308 FYYAPSYLYK--------------------IYRFENAIIVYDANEHKQDFLSDVERLRFA 347
+ I + A + + + +
Sbjct: 10744 VGGPAADTILGDSSLNLDDVRRIVTIADPFIDQPRAAGTDTIDAKGGDNVIVGDHAQIYQ 10803
Query: 348 DQCIDSV-----------------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D + + ++ T +I G D + +
Sbjct: 10804 DGSATAGIALEGTHVVSRIVSTFTGIGGGDLITVTDGNNIVIGAFGADTITAGAGNHVIL 10863
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G + FDS + +D A+ T G++ A ++ +
Sbjct: 10864 GDNGEAV-FDSGVLTSLRSIAGTTGDADTIKASDGDTTIIGGAGKDGIAVGKGTHVILGD 10922
Query: 451 D-----LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
+ V V +E DS + G+D
Sbjct: 10923 TGEARFVPGTRIINGVTVPVPVLTSIKTADDEAAVGDDDSIETGDGNVTVIGGAGAD 10979
Score = 47.1 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 62/490 (12%), Positives = 118/490 (24%), Gaps = 50/490 (10%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+ T D + D ++ G TI + I G + + V
Sbjct: 14368 SFATTAPTDGGKDTLLLGDGDNLALGGADADTITTGIGADVILGDFGSISYDAAGLLTQV 14427
Query: 147 YGVDNDYENDSFLTSVMSYFM--PQDSMMDASFGYCATPMVSDIVAVQKIYG-APKGSLG 203
D D + + + + A ++ D V G +
Sbjct: 14428 LSTDTGLGGDDVIEAGAGDNLVLGGFGADTITTEIGADVILGDSGEVLYAGGRLVQARSL 14487
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ K + D+++ G + L ++
Sbjct: 14488 DAGIGGRDAIKAGEGANIVIGGMDADVIE----TGSGRDVILGDSGLVRRDADGLAQAVS 14543
Query: 264 QHT---VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T +++ G+++V+G ++ +G D+ G SG
Sbjct: 14544 TGTALGGDDTIRAGEGDNLVLGGFGSDTIDTGAGADIVLGDSGE---------------- 14587
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ ER A + ++ +G D
Sbjct: 14588 ------------------ARFERGLIASVTTLDALNGAGDTIRAGEGDNIVLGGLGGDAI 14629
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA-RHYITHGVKEGRNPDA 439
+ +GR L + D A + + GV R
Sbjct: 14630 TTGTGNDTIVGDQGRAGFSGGVLVVLETIDPSTGGDDQIVAGNGDNLVLGGVGADRIITG 14689
Query: 440 FKALEYIASHEDLINAFADA-PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
A + + A A + +V G + + ++ G+ D+
Sbjct: 14690 TGADMILGDNGRADLALAAGRTVIRRVASTDPLAGGDDRIEAGDGNDFVAGGTGADVILG 14749
Query: 499 FGSDRGAAARH--YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
G H Y R F A ++ + D Q G D
Sbjct: 14750 GGGHDVLFGDHMLYDRALPVNQRAVSIFTAATDGGGNDSIEGGAGDDFLYGQQGDD--WL 14807
Query: 557 FGYEEGRSIT 566
G E IT
Sbjct: 14808 SGGEGDDDIT 14817
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 66/515 (12%), Positives = 124/515 (24%), Gaps = 53/515 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRY------FMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ I +NG R + D G G + I
Sbjct: 14688 TGTGADMILGDNGRADLALAAGRTVIRRVASTDPLAGGDDRIEAGDGNDFVAGGTGADVI 14747
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
G + Y N S T+ A + D
Sbjct: 14748 LGGGGHDVLFGDHMLYDRALPVNQRAV-SIFTAATDGGGNDSIEGGAGDDFLYGQQGDDW 14806
Query: 189 VAVQKIYGAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
++ + G + G+N+ + I G ++ +
Sbjct: 14807 LSGGE--GDDDITGGHNVLGGADGDDLINGGVGADVILGDNGVITRNVLVDDVKSVTWQR 14864
Query: 246 NTESW-----------SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
N ++ I N IA + + G G+D++ G ++ G
Sbjct: 14865 NPGTFADTVMRDVLRFDLIDFVGGNDAIAGGAGDDRIFGQMGDDLIYGEEGSDEIVGGLG 14924
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
D DG + +D + A++ D H+ L ++ + A
Sbjct: 14925 RDRIDGGTDVDYLLGDEGRIIRAFTGDGAAVLNSDGTWHRDVVLEEIGTVTAAIATDAQS 14984
Query: 355 NVKQRSILEYTASYEDLIQVIGQD--------------------VFESMKHFYEFGLSEG 394
+ + L + DL+ +G V + +G
Sbjct: 14985 AAARTADLAEKLAQADLVLAVGTRDGSGTRLTTAGGAWATSALTVSLARADDDIIAGGDG 15044
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
D+ F D L G D R R A+ E +
Sbjct: 15045 NDVLFGQRG----NDKLIGDAGDDLIYGDRASNLSETASDRPTIVNAIRLIGAAAETGLV 15100
Query: 455 AFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+V FG R +Y + ++ GSD +
Sbjct: 15101 LPLGGEVVVPALNLVPGAFGAGAPRI-----EVYPSMAGVVSDIAGSDPIRRSDGATLT- 15154
Query: 515 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
V P + +A ++ + + +
Sbjct: 15155 VTASLVPSLYGTNNVLAGNDVIDGGAGNDTIYGDS 15189
Score = 43.6 bits (101), Expect = 0.096, Method: Composition-based stats.
Identities = 22/219 (10%), Positives = 47/219 (21%), Gaps = 33/219 (15%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
T+ G D + L G + ++ S + G IA T
Sbjct: 11072 GDNDAVTARDGNATVIGGAGADKITL---GKGTQVVLGDSGSATFTDGK-----IATITS 11123
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS-------------- 313
+ + +G D + + + +G D D +G
Sbjct: 11124 VATAIGGG--DTITASDGDTTIIGGAGADTIDVGAGNHVILGDNGRAVFTAGALVSIESI 11181
Query: 314 -----YLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEY--- 364
I + + + L + + N + + I
Sbjct: 11182 DPGIGGNDVITARDGNVTALGGAGADRITLGKGTQVVLGDSGSATFANGRIQDITAIATE 11241
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + G + G +
Sbjct: 11242 IGGNDTIKAADGDTTIIGGAGSDGIDVGAGNHVILGDSG 11280
Score = 43.2 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 53/454 (11%), Positives = 101/454 (22%), Gaps = 30/454 (6%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+T+I D + V + + + G + I
Sbjct: 11533 DTAIGGDDTITIGDGNNVVLGGTGRDTITIGDGNNVVLGDSGQADFQAGIIVEIASISPE 11592
Query: 132 LGLMHPGSYNGGYPVY--GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
+G + G G D V + DA T + +
Sbjct: 11593 VGDKDTIALGSGRNTVIGGAGGDSITAGLRNGVKLGTGTNVILGDAGHARLTTAGLP--I 11650
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
V+ Y + + + I G D++ +
Sbjct: 11651 VVESTY---------DNVGGDDTITVGDGVAVILGGSGSDIVAAGDGRSTVLGDNGQATF 11701
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG------ 303
+ + T A + + G VVIG + SG DV G +G
Sbjct: 11702 DAQGRVLQAATTAATAGARDEITLGDGGSVVIGGVGADKIQTGSGADVILGDNGSAVFLN 11761
Query: 304 -----LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
++T + + ++ + ++ + D K
Sbjct: 11762 GALVSIETMESTFGGGDAIVAGEGDNVVFGGVGADDITTGAGLDIILGDDGAATFAQGKL 11821
Query: 359 RSILEYT---ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL---R 412
+ A + + G +V G D+ F + D +
Sbjct: 11822 VRVSTKNESVAGDDIIRAGDGDNVVLGGSGSDTITTGIGADLVFGDNGAVDFVDGVLREA 11881
Query: 413 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
G G ++ D F D + S
Sbjct: 11882 LSERVGGGGRDTIVTGAGADLVIGGLGGDTIDAGKDDTDADIVFGDNGHITFDALGRVSL 11941
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAA 506
+ D L + + GSD
Sbjct: 11942 AESVDPTLGGDDEILAGAGANLILGGAGSDTITT 11975
>gi|119492804|ref|ZP_01623890.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type [Lyngbya sp.
PCC 8106]
gi|119452957|gb|EAW34129.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type [Lyngbya sp.
PCC 8106]
Length = 447
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 47/195 (24%), Gaps = 38/195 (19%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIG 282
+D+ + + I L N ++ + + G+ GND + G
Sbjct: 231 FDADNQVTITPEDAQQATSGILLRGG----------NDQATGSSIADVINGNQGNDTISG 280
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
++ F ND+ +G G D I + +
Sbjct: 281 EGGDDYIFGGQDNDLINGGDGNDIV--NGNRGQDVISGGNGDDFIRGGQD---------- 328
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+L + LI +G D F L +
Sbjct: 329 ----------------NDVLNGDGGNDYLIGDLGSDTMTGGVGADTFMLRVDESAGVRDF 372
Query: 403 LYLGSYDDLRNVFGS 417
+ DL G
Sbjct: 373 NAVDRIADLNVGEGD 387
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 46/148 (31%), Gaps = 13/148 (8%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
A + + G + Q S I + G+D + I G
Sbjct: 244 AQQATSGILLRGGNDQATGSSIADVINGNQGNDTIS-------------GEGGDDYIFGG 290
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N I + V G+ G DV+ G + ++ NDV +G G D S
Sbjct: 291 QDNDLINGGDGNDIVNGNRGQDVISGGNGDDFIRGGQDNDVLNGDGGNDYLIGDLGSDTM 350
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERL 344
+ ++ + V+R+
Sbjct: 351 TGGVGADTFMLRVDESAGVRDFNAVDRI 378
>gi|12803593|gb|AAH02631.1| MMP28 protein [Homo sapiens]
gi|60655721|gb|AAX32424.1| matrix metalloproteinase 28 [synthetic construct]
gi|119600535|gb|EAW80129.1| matrix metallopeptidase 28, isoform CRA_b [Homo sapiens]
gi|325464269|gb|ADZ15905.1| matrix metallopeptidase 28 [synthetic construct]
Length = 393
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 52/165 (31%), Gaps = 42/165 (25%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 149 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDGPGGALAHA 208
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-PGSYNGGYPVYGVDNDY 153
E +FD+ + W +G L HEIGH LGL H P P Y
Sbjct: 209 FLPRRGEAHFDQDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKRLGRD 268
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
S+ D++AVQ +YG P
Sbjct: 269 ALLSWD---------------------------DVLAVQSLYGKP 286
>gi|10946772|ref|NP_067387.1| matrix metalloproteinase-19 isoform 1 [Mus musculus]
gi|12585271|sp|Q9JHI0|MMP19_MOUSE RecName: Full=Matrix metalloproteinase-19; Short=MMP-19; AltName:
Full=Matrix metalloproteinase RASI; Flags: Precursor
gi|8132443|gb|AAF73292.1|AF155221_1 matrix metalloproteinase 19 [Mus musculus]
gi|11095502|gb|AAG29880.1|AF153199_1 matrix metalloproteinase 19 [Mus musculus]
gi|8886433|gb|AAF80464.1| matrix metalloproteinase-19 [Mus musculus]
gi|86577774|gb|AAI12967.1| Matrix metallopeptidase 19 [Mus musculus]
gi|148692666|gb|EDL24613.1| matrix metallopeptidase 19, isoform CRA_a [Mus musculus]
Length = 527
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 59/197 (29%), Gaps = 46/197 (23%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
+LL + +V +T L P + A WS V LTF E
Sbjct: 98 KYLLLGHWRKKNLTFRIFNVPSTLSL--------PRVRAALHQAFKYWSSVAPLTFREVK 149
Query: 75 IH-SDIKFISSNNGYVCTPRYDSRYF-----------MEINFDKADVWRYGIGKGTILSH 122
+DI+ + I+FDK ++W G +G L
Sbjct: 150 AGWADIRLSFHGRQSLYCSNTFDGPGKVLAHADIPELGSIHFDKDELWTEGTYQGVNLRI 209
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE+GHALGL H Y + + A +
Sbjct: 210 IAAHEVGHALGLGH--------------------------SRYTQALMAPVYAGYQPFFK 243
Query: 183 PMVSDIVAVQKIYGAPK 199
D+ +Q +YG
Sbjct: 244 LHPDDVAGIQALYGKRS 260
>gi|301610879|ref|XP_002934971.1| PREDICTED: collagenase 3-like [Xenopus (Silurana) tropicalis]
Length = 472
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 43/150 (28%), Gaps = 21/150 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R W + Y+ T + ++ + AL WS V L F + +
Sbjct: 110 RKLKWPRNNLTYRIVNYTPDLSTSEVD-------RAIKKALKVWSDVTPLNFTRLRTGTA 162
Query: 78 DIKFISSNNGYV-CTPRYDSRY-----------FMEINFDKADVWRYGIGKGTILSHNAL 125
DI + P D KG L A
Sbjct: 163 DIMVSFGKKEHGDYYPFDGPDGLLAHAFPPGEKIGGDTHFDDDEMFSTDNKGYNLFVVAA 222
Query: 126 HEIGHALGLMHPGS-YNGGYPVYGVDNDYE 154
HE GHALGL H + +PVY +
Sbjct: 223 HEFGHALGLDHSRDPGSLMFPVYTYTETSQ 252
>gi|295983998|gb|ADG63470.1| RTX toxin IVA [Actinobacillus pleuropneumoniae]
Length = 1951
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 48/350 (13%), Positives = 93/350 (26%), Gaps = 66/350 (18%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + +GND + G ++ GND+ GS G DT+ +
Sbjct: 1499 LFGTDGDDDINDWGRNSVIDAGAGNDTINGGYGDDTLIGGKGNDILKGSYGADTYIFSKG 1558
Query: 313 SYLYKIYRFENAI-----------IVYDANE---------------HKQDFLS------- 339
+Y N + E H D ++
Sbjct: 1559 HGQDIVYEDTNNDNRARDIDTLKFTDVNYAEVKFRRVDNDLMLFGYHDTDSVTVKSFYSH 1618
Query: 340 ---DVERLRFADQCIDSVNVKQRSI-LEYTASYED----------LIQVIGQDVFESMKH 385
++L FAD+ I + + + L T +D L G D+
Sbjct: 1619 VDYQFDKLEFADRSITRDELIKAGLHLYGTDGNDDIKDHADWDSILEGGKGNDILRGGYG 1678
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
+ S+G +Y + +D R +Y +
Sbjct: 1679 ADTYIFSKGHG---QDIVYEDTNNDNRARDIDTLKFTDVNYAEVKFR------RVDNDLM 1729
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ + D + + + +F R +T D +FG+D
Sbjct: 1730 LFGYHDTDSVTIKSFYNHVDYQFDKLDFAD---RSITRDEL-----GKQGMALFGTDGDD 1781
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ + + + LI + G D +
Sbjct: 1782 NINDWGRN--SVIDAGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYI 1829
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 52/339 (15%), Positives = 100/339 (29%), Gaps = 69/339 (20%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G N++++G+ +N S+G+D+ G G DT + Y + ++Y+
Sbjct: 1086 DLKGDEKNNILLGSQKDNNLSGSAGDDLLIGGEGNDTLKGSYGADTYLFSKGHGQDVIYE 1145
Query: 330 ANE-----------------------------------HKQDFLS----------DVERL 344
++ H D ++ E+L
Sbjct: 1146 YSDSANSKSDIDTLKFTDINYAEVKFRRVGDDLMLFGYHDTDSVTVKSFYNHEYYQFEKL 1205
Query: 345 RFADQCIDSVNVKQRSI-LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
FAD+ I + ++ + L T +D+ V ++ S G D
Sbjct: 1206 EFADRSITRDELGKQGMALFGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTG 1265
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
D L+ +G+D ++ + + E + K D+ A
Sbjct: 1266 ----NDILKGSYGADTYLFSKGHGQDVIYEYSDSANSKRDIDTLKFTDVNYA----EVKF 1317
Query: 464 QVGKDHFSNFGCEEGRFVT----FDSYLY---LGSYDDLRNVFGSDRGAAARHYITHGVK 516
+ D FG + VT +D Y + D A Y T G
Sbjct: 1318 RRVGDDLMLFGYHDTDSVTVKSFYDHEYYQFEKLEFADRSISRDELIKAGLHLYGTDGND 1377
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
E + + ++ L + G D +
Sbjct: 1378 EINDHADWDSI--------LEGGKGNDILRGSYGADTYI 1408
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 66/533 (12%), Positives = 133/533 (24%), Gaps = 98/533 (18%)
Query: 66 VDLTFEETSI---HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ F E++ + + + I + D + G T L
Sbjct: 1077 AGVIFAESTDLKGDEKNNILLGSQKDNNLSGSAGD-DLLIGGEGNDTLKGSYGADTYLFS 1135
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
G ++ + D+ + ++Y +
Sbjct: 1136 KG------------HGQDVIYEYSDSANSKSDIDTLKFTDINYAEVKFR----------- 1172
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
V D + + +G + ++ D G +
Sbjct: 1173 -RVGDDLML---FGYHDTDSVTVKSFYNHEYYQFEKLEF------ADRSITRDELGKQGM 1222
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DG 300
T+ I + +N I +++ GS G+D +IG + N++ S G D +
Sbjct: 1223 ALFGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYLFSK 1282
Query: 301 SSGLDTFFYYAPSYLY--------------------------KIYRFENAIIVYDANEHK 334
G D + Y+ S ++ + + V + +
Sbjct: 1283 GHGQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVGDDLMLFGYHDTDSVTVKSFYD 1342
Query: 335 QDFLSDVERLRFADQCID----------SVNVKQRSILEYTASYED-LIQVIGQDVFESM 383
++ E+L FAD+ I + A ++ L G D+
Sbjct: 1343 HEYYQ-FEKLEFADRSISRDELIKAGLHLYGTDGNDEINDHADWDSILEGGKGNDILRGS 1401
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ S+G + Y D N S R + E + L
Sbjct: 1402 YGADTYIFSKGH-----GQDVIYEYSDSAN---SKRDIDTLKFTDVNYAEVKFRRVDDDL 1453
Query: 444 EYIASHEDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
L V+ DH + F E + +FG+D
Sbjct: 1454 M-------LFGYHDTDSVTVKSFYDHEYYQFEKLEFADRSITRDELGKQG---MALFGTD 1503
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ + + + LI + G D +
Sbjct: 1504 GDDDINDWGRN--SVIDAGAGNDTINGGYGDDTLIGGKGNDILKGSYGADTYI 1554
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 10/96 (10%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + +GND V G + ++ GND+ G G DT+ +
Sbjct: 1774 LFGTDGDDNINDWGRNSVIDAGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYIFSKG 1833
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+Y N D++ L+F D
Sbjct: 1834 HGQDIVYEDTNNDN----------RARDIDTLKFTD 1859
>gi|218661658|ref|ZP_03517588.1| Hemolysin-type calcium-binding region [Rhizobium etli IE4771]
Length = 679
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 1/114 (0%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
N S + + + + V + G GND + G N+ +G+D +G G D
Sbjct: 123 NNPSGVDVKTGDGDDVFSGSGVNDIFDGGGGNDFLAGEDGNDKLTGGAGDDQLNGGDGTD 182
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
T + Y + EN V + D L DVE +FAD D
Sbjct: 183 TAVFAGNFADYSLS-VENFEKVVTSGLEGTDTLQDVEFAQFADGVYDFDKNTFT 235
Score = 62.5 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 85/306 (27%), Gaps = 10/306 (3%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ V + ++T S T + D+ G G I
Sbjct: 300 ADVTGSSGDDTITTGAGNDTISGGDGADTLNGGAGNDHLHGGTGNDMLNGGAGNDQIFGD 359
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDN-DYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
I G + G + D + Q S
Sbjct: 360 GGNDVIRGGAGNDTITDGDVGNVSPDLGLVPEVLDIDAGDGSDVIIVQPFAPLISGTING 419
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF--IQTIYDSGGDDLLDLTLIGGV 239
+ A + + + +V + F +I + D + +
Sbjct: 420 GDGFDRLQAPDLRGLTIENIELLDTARFQVAGSSAQFESFDSIVAAS-ADPFE-SNSRAS 477
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
D S G + I+ V +G+D G N++F + G DV +
Sbjct: 478 LAVTDGAHLDLSDELGDRGAFITGYGSSID-VKAGNGDDEFAGTDGNDIFEGNGGYDVIN 536
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAII----VYDANEHKQDFLSDVERLRFADQCIDSVN 355
G +G+DT + + Y + + + + +D L+DVE RFAD +
Sbjct: 537 GGAGIDTAVFSSNFADYMLGVIYDNETHHIVTSMSGQDYEDVLTDVEFARFADGVYEFAT 596
Query: 356 VKQRSI 361
S
Sbjct: 597 QTFTST 602
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 81/299 (27%), Gaps = 13/299 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + S +G D D G G + + A
Sbjct: 132 TGDGDDVFSGSGVNDIFDGGGGNDFLAGEDGNDKLTGGAGDDQLNGGDGTDTAVFAGNFA 191
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ D+ + F D + + + + +
Sbjct: 192 DYSLSVENFEKVVTSGLEGTDTLQDVEFAQFADGVYDFDKNTFTVNSTPPDIPLNILETN 251
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA G + ++ + L ++ G V +L + S + G
Sbjct: 252 GATITKTGAELEAYDIIRHSKLNPLVAA------TLVISDSGTVDLADELGSGSAD-VTG 304
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ TI +++ G G D + G + N+ +GND+ +G +G D F
Sbjct: 305 SSGDDTITTGAGNDTISGGDGADTLNGGAGNDHLHGGTGNDMLNGGAGNDQIFGDG--GN 362
Query: 316 YKIYRFENAIIVYDAN----EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
I + D + + +V + D + ++ T + D
Sbjct: 363 DVIRGGAGNDTITDGDVGNVSPDLGLVPEVLDIDAGDGSDVIIVQPFAPLISGTINGGD 421
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 18/209 (8%), Positives = 42/209 (20%), Gaps = 6/209 (2%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
D I + + L G D + +G D ++ G
Sbjct: 133 GDGDDVFSGSGVNDIFDGGGGNDFLAGEDGNDKLTGGAGDDQLNGGDGTDT----AVFAG 188
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
++ D + + F Y + +
Sbjct: 189 NFADYSLSVENFEKVVTSGLEGTDTLQDVEFAQFADGVYDFDKNTFTVNSTPPDIPLNIL 248
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV--FGSDRGAAARHYITHGVKEGRNPDAF 524
+ + + +D + + + G +
Sbjct: 249 ETNGATITKTGAELEAYDIIRHSKLNPLVAATLVISDSGTVDLADELGSGSADVTGSSGD 308
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDH 553
+ A ++ + AG DH
Sbjct: 309 DTITTGAGNDTISGGDGADTLNGGAGNDH 337
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 56/415 (13%), Positives = 92/415 (22%), Gaps = 101/415 (24%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT---------ILSHNAL 125
S + I G + D G G T
Sbjct: 140 SGSGVNDIFDGGGGNDFLAGEDGNDKLTGGAGDDQLNGGDGTDTAVFAGNFADYSLSVEN 199
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM- 184
E GL + D Y+ D +V S + + G T
Sbjct: 200 FEKVVTSGLEGTDTLQDVEFAQFADGVYDFDKNTFTVNSTPPDIPLNILETNGATITKTG 259
Query: 185 ----VSDI----------VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL 230
DI A I + L + + S TI G+D
Sbjct: 260 AELEAYDIIRHSKLNPLVAATLVISDSGTVDLADELGSGSADVTGSSGDDTITTGAGNDT 319
Query: 231 LDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
+ TL GG N + G N I + + G +GND +
Sbjct: 320 ISGGDGADTLNGGAGNDHLHGGTGNDMLNGGAGNDQIFGDGGNDVIRGGAGNDTITDGDV 379
Query: 286 NNV------------FFESSGND-------------VFDGSSGLD--------------- 305
NV G+D +G G D
Sbjct: 380 GNVSPDLGLVPEVLDIDAGDGSDVIIVQPFAPLISGTINGGDGFDRLQAPDLRGLTIENI 439
Query: 306 ----TFFYYAPSYLYKIYRFEN---------------------------AIIVYDANEHK 334
T + + F++ + + D
Sbjct: 440 ELLDTARFQVAGSSAQFESFDSIVAASADPFESNSRASLAVTDGAHLDLSDELGDRGAFI 499
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ S + ++ + + I E Y+ + G D +F ++
Sbjct: 500 TGYGSSI-DVKAGNGDDEFAGTDGNDIFEGNGGYDVINGGAGIDTAVFSSNFADY 553
Score = 39.4 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 28/270 (10%), Positives = 55/270 (20%), Gaps = 25/270 (9%)
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
L +A + + + + + + D L +
Sbjct: 286 SGTVDLADELGSGSADVTGSSGDDTITTGAGNDTISGGDGADTLNGGAGNDHLHGGTGND 345
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY-----LGSYDDLRNVFGSDRG---- 420
L G D G D D + LG ++ ++ D
Sbjct: 346 MLNGGAGNDQIFGDGGNDVIRGGAGNDTITDGDVGNVSPDLGLVPEVLDIDAGDGSDVII 405
Query: 421 ----AAARHYITHGVKEGRNPDAFKALEYIASH-----------EDLINAFADAPDLVQV 465
A +G A + F +V
Sbjct: 406 VQPFAPLISGTINGGDGFDRLQAPDLRGLTIENIELLDTARFQVAGSSAQFESFDSIVAA 465
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
D F + D R F + G++ +G E D
Sbjct: 466 SADPFESNSRASLAVTDGAHLDLSDELGD-RGAFITGYGSSIDVKAGNGDDEFAGTDGND 524
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFS 555
E ++ + + + +
Sbjct: 525 IFEGNGGYDVINGGAGIDTAVFSSNFADYM 554
>gi|312097504|ref|XP_003148996.1| matrixin family protein [Loa loa]
gi|307755839|gb|EFO15073.1| matrixin family protein [Loa loa]
Length = 344
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 49/278 (17%), Positives = 80/278 (28%), Gaps = 58/278 (20%)
Query: 35 LTTHRLSFDITEL-NPNAQEVARWAL----GEWSKVVDLTFEETSIHSDIKFISSNNGYV 89
+ L++ I L N ++ R AL WS V LT E S DI + +
Sbjct: 74 WKKNDLTYSIESLTNELSESEVREALKKASDTWSAVTRLTLNEISQKGDITVAFARRMHD 133
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKG----------------TILSHNALHEIGHALG 133
+D + + T + A+HEIGH LG
Sbjct: 134 DPWPFDGEGGVLAHATLPSSGILHFDSDEKWVYMNPKAIISYNTTDVLQVAVHEIGHVLG 193
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
L H + S+M+ F + ++ SDI +Q
Sbjct: 194 LEHSSDSD-------------------SIMAPFYREAIDNSGNYIIPK-LSASDITNIQY 233
Query: 194 IYGAPK--GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-TESW 250
+YG + N + DL + ID+N +
Sbjct: 234 LYGINDKKSNRQNPTAGYGNDFE-------------TDLSNTDNDSSSDRKIDINCPDEV 280
Query: 251 SSIGGYEK-NMTIAQHTVIESVVGSSGNDVVIGNSANN 287
I + N + + V E + ++ N N
Sbjct: 281 DGIITTDGSNYLFSGNKVYEFGNTGIRKEYLLKNLFPN 318
>gi|303253589|ref|ZP_07339727.1| RTX toxin protein [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|302647509|gb|EFL77727.1| RTX toxin protein [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
Length = 1951
Score = 64.0 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 48/350 (13%), Positives = 93/350 (26%), Gaps = 66/350 (18%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + +GND + G ++ GND+ GS G DT+ +
Sbjct: 1499 LFGTDGDDDINDWGRNSVIDAGAGNDTINGGYGDDTLIGGKGNDILKGSYGADTYIFSKG 1558
Query: 313 SYLYKIYRFENAI-----------IVYDANE---------------HKQDFLS------- 339
+Y N + E H D ++
Sbjct: 1559 HGQDIVYEDTNNDNRARDIDTLKFTDVNYAEVKFRRVDNDLMLFGYHDTDSVTVKSFYSH 1618
Query: 340 ---DVERLRFADQCIDSVNVKQRSI-LEYTASYED----------LIQVIGQDVFESMKH 385
++L FAD+ I + + + L T +D L G D+
Sbjct: 1619 VDYQFDKLEFADRSITRDELIKAGLHLYGTDGNDDIKDHADWDSILEGGKGNDILRGGYG 1678
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
+ S+G +Y + +D R +Y +
Sbjct: 1679 ADTYIFSKGHG---QDIVYEDTNNDNRARDIDTLKFTDVNYAEVKFR------RVDNDLM 1729
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ + D + + + +F R +T D +FG+D
Sbjct: 1730 LFGYHDTDSVTIKSFYNHVDYQFDKLDFAD---RSITRDEL-----GKQGMALFGTDGDD 1781
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ + + + LI + G D +
Sbjct: 1782 NINDWGRN--SVIDAGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYI 1829
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 52/339 (15%), Positives = 100/339 (29%), Gaps = 69/339 (20%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G N++++G+ +N S+G+D+ G G DT + Y + ++Y+
Sbjct: 1086 DLKGDEKNNILLGSQKDNNLSGSAGDDLLIGGEGNDTLKGSYGADTYLFSKGHGQDVIYE 1145
Query: 330 ANE-----------------------------------HKQDFLS----------DVERL 344
++ H D ++ E+L
Sbjct: 1146 YSDSANSKSDIDTLKFTDINYAEVKFRRVGDDLMLFGYHDTDSVTVKSFYNHEYYQFEKL 1205
Query: 345 RFADQCIDSVNVKQRSI-LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
FAD+ I + ++ + L T +D+ V ++ S G D
Sbjct: 1206 EFADRSITRDELGKQGMALFGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTG 1265
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
D L+ +G+D ++ + + E + K D+ A
Sbjct: 1266 ----NDILKGSYGADTYLFSKGHGQDVIYEYSDSANSKRDIDTLKFTDVNYA----EVKF 1317
Query: 464 QVGKDHFSNFGCEEGRFVT----FDSYLY---LGSYDDLRNVFGSDRGAAARHYITHGVK 516
+ D FG + VT +D Y + D A Y T G
Sbjct: 1318 RRVGDDLMLFGYHDTDSVTVKSFYDHEYYQFEKLEFADRSISRDELIKAGLHLYGTDGND 1377
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
E + + ++ L + G D +
Sbjct: 1378 EINDHADWDSI--------LEGGKGNDILRGSYGADTYI 1408
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 66/533 (12%), Positives = 133/533 (24%), Gaps = 98/533 (18%)
Query: 66 VDLTFEETSI---HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ F E++ + + + I + D + G T L
Sbjct: 1077 AGVIFAESTDLKGDEKNNILLGSQKDNNLSGSAGD-DLLIGGEGNDTLKGSYGADTYLFS 1135
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
G ++ + D+ + ++Y +
Sbjct: 1136 KG------------HGQDVIYEYSDSANSKSDIDTLKFTDINYAEVKFR----------- 1172
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
V D + + +G + ++ D G +
Sbjct: 1173 -RVGDDLML---FGYHDTDSVTVKSFYNHEYYQFEKLEF------ADRSITRDELGKQGM 1222
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DG 300
T+ I + +N I +++ GS G+D +IG + N++ S G D +
Sbjct: 1223 ALFGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYLFSK 1282
Query: 301 SSGLDTFFYYAPSYLY--------------------------KIYRFENAIIVYDANEHK 334
G D + Y+ S ++ + + V + +
Sbjct: 1283 GHGQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVGDDLMLFGYHDTDSVTVKSFYD 1342
Query: 335 QDFLSDVERLRFADQCID----------SVNVKQRSILEYTASYED-LIQVIGQDVFESM 383
++ E+L FAD+ I + A ++ L G D+
Sbjct: 1343 HEYYQ-FEKLEFADRSISRDELIKAGLHLYGTDGNDEINDHADWDSILEGGKGNDILRGS 1401
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ S+G + Y D N S R + E + L
Sbjct: 1402 YGADTYIFSKGH-----GQDVIYEYSDSAN---SKRDIDTLKFTDVNYAEVKFRRVDDDL 1453
Query: 444 EYIASHEDLINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSD 502
L V+ DH + F E + +FG+D
Sbjct: 1454 M-------LFGYHDTDSVTVKSFYDHEYYQFEKLEFADRSITRDELGKQG---MALFGTD 1503
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ + + + LI + G D +
Sbjct: 1504 GDDDINDWGRN--SVIDAGAGNDTINGGYGDDTLIGGKGNDILKGSYGADTYI 1554
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 10/96 (10%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + +GND V G + ++ GND+ G G DT+ +
Sbjct: 1774 LFGTDGDDNINDWGRNSVIDAGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYIFSKG 1833
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+Y N D++ L+F D
Sbjct: 1834 HGQDIVYEDTNNDN----------RARDIDTLKFTD 1859
>gi|113476202|ref|YP_722263.1| periplasmic protein TonB links inner and outer membranes-like
[Trichodesmium erythraeum IMS101]
gi|110167250|gb|ABG51790.1| Periplasmic protein TonB links inner and outer membranes-like
[Trichodesmium erythraeum IMS101]
Length = 1197
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 12/182 (6%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+LT G + I +++ G N + + ++++G G D +IG + N+
Sbjct: 889 NLTGRGNDRANIIRGNSGNNNLEGKGGNDQLFGNNGADNLLGGDGKDTLIGGAGNDKLNG 948
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL------- 344
+D G +G D Y S I N + + + +++E+L
Sbjct: 949 GKDDDRLIGGTGDD--VYTIDSTKDIIIERANQGNDHVRSLVTYNLNNNLEKLTLLGKNN 1006
Query: 345 ---RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
R D+ + LE + L G D G DI
Sbjct: 1007 IIGRGNDRANVIRGNSGNNKLEGKGGNDQLFGNNGADNLLGGNGNDALNGGGGLDILNGG 1066
Query: 402 YL 403
Sbjct: 1067 SG 1068
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 9/189 (4%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
+D + N+S F+ D FG + + +++G
Sbjct: 457 NSGNDTLDGNGRNNSIDGGDGDDFINGKGGNDELFGENGADTLLGDLGNDELFGGNG--- 513
Query: 203 GNNIYKIE--VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
G+++ ++ S G D LD GG + + G +N
Sbjct: 514 GDSLVGGPGRDLLDGGTGNDSLNGSSGPDTLD----GGAGEDNLVGGPDGDRLFGGPRND 569
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
T+ +S++G +GND ++G ++ + GND DG G D + + +
Sbjct: 570 TLDGGLGRDSLIGGNGNDSLMGGNSIDTIDGGIGNDTIDGGRGPDVISGEDNADTFVLRS 629
Query: 321 FENAIIVYD 329
+ D
Sbjct: 630 TYGNDQILD 638
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/355 (13%), Positives = 103/355 (29%), Gaps = 30/355 (8%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ K I GG+D L G L + ++ G N + +
Sbjct: 743 NNEIKGLGGNDLISGKGGNDQL----FGDDGADTLLGDDGKDTLNGGVGNDKLDGGKDDD 798
Query: 270 SVVGSSGN--DVVIGNSANNVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKI 318
++G +GN D+++G + +GND G +G D Y S I
Sbjct: 799 RLIGGAGNGADILLGGDGKDTLIGGAGNDKLDGGKDDDHLIGGTGND--VYTINSRKDII 856
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV-NVKQRSILEYTASYEDLIQVIGQ 377
+ + + +++ERL + + + +I+ + +L G
Sbjct: 857 IERARQGNDHVMSSVTYNLSNNLERLTLLGKNNLTGRGNDRANIIRGNSGNNNLEGKGGN 916
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D +G+D G+ +D N D I +
Sbjct: 917 DQLFGNNGADNLLGGDGKDTL-----IGGAGNDKLNGGKDDDRL-----IGGTGDDVYTI 966
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
D+ K + +++ + + + + + G D +
Sbjct: 967 DSTKDIIIERANQGNDHVRSLVTYNLNNNLEKLTLLGKNNIIGRGNDRANVIRGNSGNNK 1026
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G + + +G + AL + L + +G+D
Sbjct: 1027 LEGKGGND--QLFGNNGADNLLGGNGNDALNGGGGLDILNGGSGQDTLIGSSGRD 1079
Score = 46.3 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 36/273 (13%), Positives = 70/273 (25%), Gaps = 22/273 (8%)
Query: 69 TFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
E ++ N R +S D G +L + +
Sbjct: 878 NLERLTLLGKNNLTGRGNDRANIIRGNSGNNNLEGKGGNDQLFGNNGADNLLGGDGKDTL 937
Query: 129 GHALGLMHPGSYNGGYPVYGVDND----------------YENDSFLTSVMSYFMPQDSM 172
G + G D + + + S+++Y + +
Sbjct: 938 IGGAGNDKLNGGKDDDRLIGGTGDDVYTIDSTKDIIIERANQGNDHVRSLVTYNLNNNLE 997
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
G + A G+ Q + + G+D L+
Sbjct: 998 KLTLLGKNNIIGRGNDRANVIR--GNSGNNKLEGKGGNDQLFGNNGADNLLGGNGNDALN 1055
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
GG I ++ G T+ +S++G S D + G S +
Sbjct: 1056 ----GGGGLDILNGGSGQDTLIGSSGRDTLIGGLDADSLLGGSDVDTLNGGSGRDTLDGG 1111
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
D G S D+F + +I + +
Sbjct: 1112 RNPDRLTGGSDADSFVLRSGDGNDRILDYVDGT 1144
Score = 44.0 bits (102), Expect = 0.092, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 33/125 (26%), Gaps = 10/125 (8%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+SGND + GN NN G+D +G G D F + + ++ N
Sbjct: 457 NSGNDTLDGNGRNNSIDGGDGDDFINGKGGNDELF--GENGADTLLGDLGNDELFGGNGG 514
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
L L ++ + L G+D
Sbjct: 515 D--------SLVGGPGRDLLDGGTGNDSLNGSSGPDTLDGGAGEDNLVGGPDGDRLFGGP 566
Query: 394 GRDIT 398
D
Sbjct: 567 RNDTL 571
>gi|149051938|gb|EDM03755.1| rCG35535 [Rattus norvegicus]
Length = 531
Score = 64.0 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 62/195 (31%), Gaps = 51/195 (26%)
Query: 29 RYKPDVLTTHRLSFDITELNPNA---QEVARW----ALGEWSKVVDLTFEETSIHSD--- 78
V L++ I + ++ Q V R AL W+ LTF+E
Sbjct: 79 TLSGSVWKKRTLTWSIQSFSQSSRLSQSVVRTLVSYALDVWAVASGLTFQEVDSQYQEPD 138
Query: 79 --IKFI-------------SSNNGYVCTPRYDSRYFMEINFDKADVWRYG--IGKGTILS 121
I F + P + +FD + W +G G+GT L
Sbjct: 139 IVIHFSRAYHQDSYPFDGPGGTLAHAFFPGEHP-ISGDTHFDDEETWTFGSTDGEGTDLF 197
Query: 122 HNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCA 181
A+HE GHALGL H S S+M F ++
Sbjct: 198 AVAVHEFGHALGLGHS-------------------SAPDSIMRPFYQGPVGDPGTYRLSQ 238
Query: 182 TPMVSDIVAVQKIYG 196
D +Q++YG
Sbjct: 239 ----DDRDGLQQLYG 249
>gi|114571026|ref|YP_757706.1| hypothetical protein Mmar10_2480 [Maricaulis maris MCS10]
gi|114341488|gb|ABI66768.1| hypothetical protein Mmar10_2480 [Maricaulis maris MCS10]
Length = 143
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF--NPDLYLTSYDDLWN 581
F EY+ + D+ +A + V + DHF G++EGR + YL+ D+
Sbjct: 46 FDEDEYVQRNPDVGDAIS--RGRVASALDHFLRQGFQEGRDYSLKCQEQEYLSHNPDIAA 103
Query: 582 VFGSDRS-AAAQHYITHGMKEGRALG 606
F S + H+ G EGR
Sbjct: 104 AFESGDIVNVSAHFHETGYAEGRVGS 129
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 483 FDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGRNPDAF-KALEYIASHEDLINAF 540
FD Y+ D+ + +A H++ G +EGR+ + EY++ + D+ AF
Sbjct: 46 FDEDEYVQRNPDVGDAISRGRVASALDHFLRQGFQEGRDYSLKCQEQEYLSHNPDIAAAF 105
Query: 541 ADAPDLVQAGKDHFSNFGYEEGR 563
+ + HF GY EGR
Sbjct: 106 ESGDIVNVSA--HFHETGYAEGR 126
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGRNPDAFK-ALEYIASHEDLINAF 456
FD Y+ D+ + R +A H++ G +EGR+ EY++ + D+ AF
Sbjct: 46 FDEDEYVQRNPDVGDAISRGRVASALDHFLRQGFQEGRDYSLKCQEQEYLSHNPDIAAAF 105
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVT 482
+ HF G EGR +
Sbjct: 106 ESGDIV--NVSAHFHETGYAEGRVGS 129
Score = 41.7 bits (96), Expect = 0.45, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 3/85 (3%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF--DSYLYLGSYDDL 411
+ + + + + V ++ HF G EGRD + YL D+
Sbjct: 42 TSAEFDEDEYVQRNPDVGDAISRGRVASALDHFLRQGFQEGRDYSLKCQEQEYLSHNPDI 101
Query: 412 RNVFG-SDRGAAARHYITHGVKEGR 435
F D + H+ G EGR
Sbjct: 102 AAAFESGDIVNVSAHFHETGYAEGR 126
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 562 GRSITFNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGRALGI 607
S F+ D Y+ D+ + R A A H++ G +EGR +
Sbjct: 41 ATSAEFDEDEYVQRNPDVGDAISRGRVASALDHFLRQGFQEGRDYSL 87
>gi|307252635|ref|ZP_07534528.1| RTX toxin protein [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306859880|gb|EFM91900.1| RTX toxin protein [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
Length = 1560
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 64/532 (12%), Positives = 138/532 (25%), Gaps = 96/532 (18%)
Query: 66 VDLTFEETSI---HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ F E++ + + + I + D + G T L
Sbjct: 961 AGVIFAESTDLKGDEKNNILLGSQKDNNLSGSAGD-DLLIGGEGNDTLKGSYGADTYLFS 1019
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
G ++ + D+ + ++Y +
Sbjct: 1020 KG------------HGQDVIYEYSDSANSKSDIDTLKFTDINYAEVKFR----------- 1056
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
V D + + +G + ++ D G +
Sbjct: 1057 -RVGDDLML---FGYHDTDSVTVKSFYNHEYYQFEKLEF------ADRSITRDELGKQGM 1106
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DG 300
T+ I + +N I +++ GS G+D +IG + N++ S G D +
Sbjct: 1107 ALFGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYLFSK 1166
Query: 301 SSGLDTFFYYAPSYLY--------------------------KIYRFENAIIVYDANEHK 334
G D + Y+ S ++ + + V + +
Sbjct: 1167 GHGQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVGYDLMLFGYHDTDSVTVKSFYS 1226
Query: 335 QDFLSDVERLRFADQCIDSVNVKQRSI-LEYTASYED----------LIQVIGQDVFESM 383
++ E+L FAD+ I + + + L T +D L G D+
Sbjct: 1227 HEYYQ-FEKLEFADRSITRDELIKAGLHLYGTDGNDDIKDHADWDSILEGGKGNDILRGG 1285
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ S+G +Y + +D R +Y +
Sbjct: 1286 YGADTYIFSKGHG---QDIVYEDTNNDNRARDIDTLKFTDVNYAEVKFR------RVDND 1336
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ + D + + + +F R +T D +FG+D
Sbjct: 1337 LMLFGYHDTDSVTIKSFYNHVDYQFDKLDFAD---RSITRDEL-----GKQGMALFGTDG 1388
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ + + + LI + G D +
Sbjct: 1389 DDNINDWGRN--SVIDAGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYI 1438
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 10/96 (10%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + +GND V G + ++ GND+ G G DT+ +
Sbjct: 1383 LFGTDGDDNINDWGRNSVIDAGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYIFSKG 1442
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+Y N D++ L+F D
Sbjct: 1443 HGQDIVYEDTNNDN----------RARDIDTLKFTD 1468
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 43/358 (12%), Positives = 88/358 (24%), Gaps = 27/358 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK----GTILSHNALHEIGH 130
+D ++ G + D G G G+ + L GH
Sbjct: 1109 FGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYLFSKGH 1168
Query: 131 ALGL---MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+ + + D + Y + D + +
Sbjct: 1169 GQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVGYDLMLFGYHDTDSVTVKSFYSHE 1228
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+K+ A + + + K + + I D D + G + +
Sbjct: 1229 YYQFEKLEFADRSITRDELIKAGLHLYGTDGNDDIKDHADWDSI--LEGGKGNDILRGGY 1286
Query: 248 ESWSSIGG-YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV-FDGSSGLD 305
+ + I + + T ++ + V F ND+ G D
Sbjct: 1287 GADTYIFSKGHGQDIVYEDTNNDNRARDIDTLKFTDVNYAEVKFRRVDNDLMLFGYHDTD 1346
Query: 306 TF----FYYAPSYLYKIYRFENAIIVYD------ANEHKQDFLSDVERLRFADQCIDSVN 355
+ FY Y + F + I D D ++ +
Sbjct: 1347 SVTIKSFYNHVDYQFDKLDFADRSITRDELGKQGMALFGTDGDDNINDW---GRNSVIDA 1403
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
+ + LI G D+ + S+G +Y + +D R
Sbjct: 1404 GAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYIFSKGHG---QDIVYEDTNNDNRA 1458
>gi|110678217|ref|YP_681224.1| type I secretion target repeat-containing protein [Roseobacter
denitrificans OCh 114]
gi|109454333|gb|ABG30538.1| type I secretion target repeat protein [Roseobacter denitrificans
OCh 114]
Length = 633
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/266 (13%), Positives = 68/266 (25%), Gaps = 8/266 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ G D L D L GGV + E + G + + +A
Sbjct: 264 GGDSLVGGLGSDILIGGAGRDFLTGGDDDDELYGGVDSDNLDAGEGNDLLYGGDGDDFLA 323
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + + G +G+D + G N+ F +G D G +G D +
Sbjct: 324 AYGGDDVLKGGNGDDTLAGGLGNDRIFGGTGADEIFGGAGDDVIV--GREGNDTVDGGAG 381
Query: 324 AIIVYDAN-EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
I+ + + + + + D + L + + + G D
Sbjct: 382 NDIILGNFKQDRLSGGAGDDAIFGGDGRDYLYGNEGNDRLYGGQNLDIIYGGEGDDFIFG 441
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+G+D + + + R G
Sbjct: 442 NDDNDLLYGGDGKDTLYGQQGIDSLRGEEGDDILFGGDGDDRLSGNSGADMLWGGAGNDI 501
Query: 443 LEYIASHEDLINAFADAPDLVQVGKD 468
L + + L D D
Sbjct: 502 LYGGSGSDILRGGLGDDTFEFNEVSD 527
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 44/260 (16%), Positives = 77/260 (29%), Gaps = 17/260 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + + D G+G I EI G
Sbjct: 305 DAGEGNDLLYGGDGDDFLAAYGGDDVLKGGNGDDTLAGGLGNDRIFGGTGADEIFGGAGD 364
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G V D ND L + + + DA FG + ++
Sbjct: 365 DVIVGREGNDTV---DGGAGNDIILGNFKQDRLSGGAGDDAIFGGDGRDYLYGNEGNDRL 421
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG I+ + +DLL GG + S+
Sbjct: 422 YGGQNL----------DIIYGGEGDDFIFGNDDNDLL----YGGDGKDTLYGQQGIDSLR 467
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G E + + + + G+SG D++ G + N++ + SG+D+ G G DTF + S
Sbjct: 468 GEEGDDILFGGDGDDRLSGNSGADMLWGGAGNDILYGGSGSDILRGGLGDDTFEFNEVSD 527
Query: 315 LYKIYRFENAIIVYDANEHK 334
++ I +
Sbjct: 528 STRLAADVIKDIEGVGSAGG 547
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 47/335 (14%), Positives = 86/335 (25%), Gaps = 13/335 (3%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + + T+ + I + + + ++G G+D++ G N++ SGND
Sbjct: 180 TGAGDDVIIGTDDTNLIDSGAGDDRVFGRGGDDGLIGGDGDDILFGEDGNDILRGGSGND 239
Query: 297 VFDGSSGLDTFFYYAPSYLY-----KIYRFENAIIVYDANEHKQDFLSD---VERLRFAD 348
G G D + L +DFL+ + L
Sbjct: 240 RLYGGDGHDEMYGQTGDDLMIGKAGGDSLVGGLGSDILIGGAGRDFLTGGDDDDELYGGV 299
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ + +L + L G DV + G D F +
Sbjct: 300 DSDNLDAGEGNDLLYGGDGDDFLAAYGGDDVLKGGNGDDTLAGGLGNDRIFGGTGADEIF 359
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
+ R G L A + + G D
Sbjct: 360 GGAGDDVIVGREGNDTVDGGAGNDIILGNFKQDRLSGGAGDDAIFGGDGRDYLYGNEGND 419
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
+ + + ++ DD ++G D Y G+ R + L
Sbjct: 420 RLYGGQNLDIIYGG-EGDDFIFGNDDNDLLYGGDGKDTL--YGQQGIDSLRGEEGDDILF 476
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ L AG D +G
Sbjct: 477 GGDGDDRLSGNSGADMLWGGAGND--ILYGGSGSD 509
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 57/416 (13%), Positives = 100/416 (24%), Gaps = 24/416 (5%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+I G + + TI +++ G+D + S N+ S G D+ G DT
Sbjct: 53 GDDTITGTDVDNTIDSGPGSDTIDAGGGDDTIFARSGNDTILASPGGDLIFAGEGNDTIT 112
Query: 309 YYAPSY------------LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
P F + D + S L ++ +
Sbjct: 113 TSGPDAVHAEAGNDTVILGDSTELFADGGSGVDRMDASVSTASFRINLGTFATGVEGMRF 172
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
L A + +I ++ +S G D + + N
Sbjct: 173 VNFENLMTGAGDDVIIGTDDTNLIDSGAGDDRVFGRGGDDGLIGGDGDDILFGEDGNDIL 232
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
R Y G E + A + L+ + G+D + +
Sbjct: 233 RGGSGNDRLYGGDGHDEMYGQTGDDLMIGKAGGDSLVGGLGSDILIGGAGRDFLTGGDDD 292
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 536
+ + DS + G A + G + + L ++ +
Sbjct: 293 DELYGGVDSDNLDAGEGNDLLYGGDGDDFLAAY---GGDDVLKGGNGDDTLAGGLGNDRI 349
Query: 537 INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSA--AAQHY 594
AG D + D + F DR + A
Sbjct: 350 FGGTGADEIFGGAGDDVIVGREGN-------DTVDGGAGNDIILGNFKQDRLSGGAGDDA 402
Query: 595 ITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGNYY 650
I G G G + F + DL G Y
Sbjct: 403 IFGGDGRDYLYGNEGNDRLYGGQNLDIIYGGEGDDFIFGNDDNDLLYGGDGKDTLY 458
>gi|91776789|ref|YP_546545.1| hemolysin-type calcium-binding region [Methylobacillus flagellatus
KT]
gi|91710776|gb|ABE50704.1| Hemolysin-type calcium-binding region [Methylobacillus flagellatus
KT]
Length = 1286
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 48/362 (13%), Positives = 88/362 (24%), Gaps = 16/362 (4%)
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
++D T E I N + + NFD R G ++
Sbjct: 678 NIIDPTVETLISGGSGADILRNIQNINGSAAGNDTITVGNFDSTINARNGNNLIKAGTNT 737
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA--SFGYCA 181
A G + G +D N++ + + + D S +
Sbjct: 738 GSSTYNIAAGSGNDTIEALGSGNNVIDAGNGNNNIKAGNGNNTITTGNGNDTIVSGTGLS 797
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
M D I A G + I L + +
Sbjct: 798 NIMAGDGTNTITIGNANSTVTGGTGSDTVTYNLSTSVYANIDTGFAGSSLGTAQANRLVD 857
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
L S N T+ + + G +GND + G N+ + +G D DG
Sbjct: 858 IDHLTGGS--------GNDTLIGNDGNNILRGGAGNDSIFGGGGNDTIYGGAGADTIDGG 909
Query: 302 SGLDTFFYYAP------SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
+G +T Y + L + ++ + +D+ V
Sbjct: 910 TGNNTAVYTSSVLVSLTDGLLRTTNTNGDVLGSGTIVNGGIAGRATGGSTASDEAFGDVL 969
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+++ + LI + G D +
Sbjct: 970 TNIQNLTVEGSGSSYLIGNSQANRLTGGSGNDTLEGIGGGDTLDGGSGSGTDTATYVHAS 1029
Query: 416 GS 417
Sbjct: 1030 AG 1031
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 53/175 (30%)
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
D I S G ++ + + + + E M + + + + G
Sbjct: 364 PDFTINAYIKGSSGPFTFEVGKDFYFRYIDATTADDFIATKNGEAIMVLPSNGIGYKIDG 423
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND++ + N+ GN+ DG G +T Y + + + +
Sbjct: 424 GDGNDIISAGAGNDTLIGGHGNNQLDGGLGNNTASYENMTIGQDVTASLISNTGTVSGGI 483
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D ++++ L + L A + L+ G D +
Sbjct: 484 ASDTYANIQNLTGGAGNDFLTGNIVANRLIGGAGNDTLVGGGGADTLDGGDGVDT 538
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 64/544 (11%), Positives = 155/544 (28%), Gaps = 59/544 (10%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+ +D + N + + + D D+ G G T++ + +++ LG
Sbjct: 394 ATTADDFIATKNGEAIMVLPSNGIGYKIDGGDGNDIISAGAGNDTLIGGHGNNQLDGGLG 453
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
+ SY V +++ S ++ + + G + +IVA +
Sbjct: 454 -NNTASYENMTIGQDVTASLISNTGTVSGGIASDTYANIQNLTGGAGNDFLTGNIVANRL 512
Query: 194 IYGAPKGSL---------------------------------GNNIYKIEVQQKDSPFIQ 220
I GA +L GN + I+
Sbjct: 513 IGGAGNDTLVGGGGADTLDGGDGVDTASFVDLAAVNVVLDANGNGTGETASGNVTLLSIE 572
Query: 221 TIYDSGGDDLLDLTL-----IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ + DD +++ G I + S + N+ + T + +
Sbjct: 573 NLVGTDHDDTFQVSVLPSEVGGVKSGVIQGGAGTDSLVYNVAGNLNVDLQTGTVNGITDI 632
Query: 276 GNDV--VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ + + S N++ ++G + DG +G +T + + + + + +
Sbjct: 633 LDSIENITTGSGNDIIVATNGVNKIDGGAGNNTVDFIHATTGVSVNIIDPTVETLISGGS 692
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D L +++ + + + + G ++ ++ + +
Sbjct: 693 GADILRNIQNIN--------GSAAGNDTITVGNFDSTINARNGNNLIKAGTNTGSSTYNI 744
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
D+ LGS +++ + + + I G ++
Sbjct: 745 AAGSGNDTIEALGSGNNVIDAGNGN------NNIKAGNGNNTITTGNGNDTIVSGTGLSN 798
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
D + + +G + + G VT++ + + D S A A +
Sbjct: 799 IMAGDGTNTITIGNANSTVTGGTGSDTVTYNLSTSVYANIDTGFAGSSLGTAQANRLVDI 858
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYL 573
G L + L + G D + +G +I
Sbjct: 859 DHLTG--GSGNDTLIGNDGNNILRGGAGNDSIFGGGGND--TIYGGAGADTIDGGTGNNT 914
Query: 574 TSYD 577
Y
Sbjct: 915 AVYT 918
>gi|86139953|ref|ZP_01058518.1| hypothetical protein MED193_02960 [Roseobacter sp. MED193]
gi|85823371|gb|EAQ43581.1| hypothetical protein MED193_02960 [Roseobacter sp. MED193]
Length = 557
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 37/174 (21%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
G+ +Y + I S +DL+ GG + + L + G + TI
Sbjct: 269 GDVVYGFDTP-------DHIGGSEDNDLV----YGGDGSDVLLGYGGDDFLIGAAGDDTI 317
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYAPS 313
+ + G G D++ G + +++ + +DV G +G DT +
Sbjct: 318 DGGEGDDRISGGHGEDLLAGGAGDDILSGGADDDVLRDGHGADRLFGDAGNDTIYLADDL 377
Query: 314 YLYKIYRFENAIIV-----------------YDANEHKQDFLSDVERLRFADQC 350
++Y I+ + D +E D
Sbjct: 378 EADQVYGGAGDDILDLTAGDRAARVDVAAGTVTRADSPTDTFDGIEIFTAGDGA 431
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 56/197 (28%), Gaps = 31/197 (15%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + GS ND+V G ++V G+D G++G DT
Sbjct: 279 DHIGGSEDNDLVYGGDGSDVLLGYGGDDFLIGAAGDDTI-------------DGGEGDDR 325
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ H +D L+ IL A + L G D
Sbjct: 326 ISGGHGEDLLAG---------------GAGDDILSGGADDDVLRDGHGADRLFGDAGNDT 370
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
L+ D +Y G+ DD+ ++ DR A + D F +E +
Sbjct: 371 IYLA---DDLEADQVYGGAGDDILDLTAGDRAARVDVAAGTVTRADSPTDTFDGIEIFTA 427
Query: 449 HEDLINAFADAPDLVQV 465
+
Sbjct: 428 GDGAEVFDLSGFFTPGA 444
>gi|297579039|ref|ZP_06940967.1| autotransporter adhesin [Vibrio cholerae RC385]
gi|297536633|gb|EFH75466.1| autotransporter adhesin [Vibrio cholerae RC385]
Length = 4405
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 55/220 (25%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L I+++ +++ G + A + G G+DV +N+
Sbjct: 4028 DFLRNNGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGTSNI 4087
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F GND + G G DT A + + + D S
Sbjct: 4088 FTGGEGNDMGVLMGRENMMFGGDGNDTAVV-AGRINHVFLGAGDDQSFVFGEGGEIDTGS 4146
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + G D + G D+
Sbjct: 4147 GRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANVFGNHNRINAGAGNDVVK 4206
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + N + A G
Sbjct: 4207 -----LMGYHAVLNGGDGEDHLIAAAISKFSQFNGGEGRD 4241
Score = 39.0 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 21/163 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN-----TESWSSIGGYEKNM--- 260
+ I ++ GDD + GG + + +++ + +
Sbjct: 4111 GNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSV 4170
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDGSSGLDTFFYYA 311
TI + +E +GND +N +GNDV +G G D A
Sbjct: 4171 TIGNNNQVE---LGAGNDFANVFGNHNRINAGAGNDVVKLMGYHAVLNGGDGEDHLIAAA 4227
Query: 312 PSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDS 353
S + E ++ +DV+ + ID+
Sbjct: 4228 ISKFSQFNGGEGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDN 4270
Score = 39.0 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 37/164 (22%), Gaps = 11/164 (6%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
S + N + +G G + ++ S SG DT
Sbjct: 8 SVEYFFTGNYSADDGNNNIVAIGFGG--QIHAYGGDDHVTVGSIGATVYTGSGNDTVV-- 63
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ----CIDSVNVKQRSILEYTA 366
S K+ + V A + S + FA ID + A
Sbjct: 64 GGSAYLKVEDSTGHLTVKGAAGYADINKSGDGNVSFAGAAGGVSIDHLGNHGDISYGGAA 123
Query: 367 SYE--DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+Y + G F + E
Sbjct: 124 AYNGITRKGLSGNVTFAGAGGYNAL-WHETNQGNLSFTGAGAGN 166
Score = 38.2 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 57/200 (28%), Gaps = 28/200 (14%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
+ Y A ++IVA+ G Y + T+Y G+D +
Sbjct: 13 FTGNYSADDGNNNIVAIGF--GGQIH-----AYGGDDHVTVGSIGATVYTGSGNDTVVGG 65
Query: 235 L------IGGVKNYIDLNTESWSSIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSA 285
+ + N++ A I+ + G+ G+ G +A
Sbjct: 66 SAYLKVEDSTGHLTVKGAAGYADINKSGDGNVSFAGAAGGVSIDHL-GNHGDISYGGAAA 124
Query: 286 NNVFF--ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N SGN F G+ G + ++ + + A + + R
Sbjct: 125 YNGITRKGLSGNVTFAGAGGYNALWHET---------NQGNLSFTGAGAGNKLDRTWFNR 175
Query: 344 LRFADQCIDSVNVKQRSILE 363
+ + + + +
Sbjct: 176 YQGSHGDVTFDGAGAANSIS 195
>gi|124026282|ref|YP_001015398.1| hypothetical protein NATL1_15761 [Prochlorococcus marinus str.
NATL1A]
gi|123961350|gb|ABM76133.1| Hypothetical protein NATL1_15761 [Prochlorococcus marinus str.
NATL1A]
Length = 580
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 79/221 (35%), Gaps = 14/221 (6%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD-- 329
GSS ND + G+S+N FF S G+D+ +G G DT Y Y R +N++ + D
Sbjct: 302 TGSSSNDELTGSSSNETFFASEGSDIINGKGGNDTSIYSGKFSDYSFTREDNSLAIADQR 361
Query: 330 -ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ-VIGQDVFESMKHFY 387
+ D LS++E ++F+DQ ++ V S G ++ +
Sbjct: 362 TGKNNGTDTLSNIEYIQFSDQKVEESKVDVVKTYSGKFSDYKFYNKGNGVYQIKTDSGYD 421
Query: 388 EFGL-------SEGRDITFDSYLYLGSYD---DLRNVFGSDRGAAARHYITHGVKEGRNP 437
+ EG +F + D +D G R Y + +
Sbjct: 422 DITGFPLLTFTGEGTTSSFKDISAIADIKGTFDQVTGLNTDSGRMFRLYNASFKRLPDSD 481
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
++ +S + I A + + + + +
Sbjct: 482 GLAYWIDNFSSGRNSIRVVASSFLGSAEFAERYGDNVSDST 522
>gi|300867548|ref|ZP_07112198.1| hypothetical protein OSCI_3410019 [Oscillatoria sp. PCC 6506]
gi|300334436|emb|CBN57368.1| hypothetical protein OSCI_3410019 [Oscillatoria sp. PCC 6506]
Length = 528
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 59/170 (34%), Gaps = 12/170 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
SP + + G D L D L G + I L +S + G + N ++
Sbjct: 324 NDNIIGSPATDVVLAAEGADTLEGAGDGDYLLGGKGDDRI-LGEDSNDILSGNQGNDFVS 382
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ V G GND + G+ ++ G D G G D F + + +
Sbjct: 383 GGVADDLVRGGKGNDQIFGDDGEDILIGERGTDRLTGGGGSDIFILRTDTGIEETNPANA 442
Query: 324 AIIVYDANEHKQDFLSD----VERLRFADQCIDSVNVKQRSILEYTASYE 369
++ + ++ L F+ + + +I++YT + E
Sbjct: 443 DWLLDFNASEGDLIGINGGVPIDILTFS-PTDVNQDGIADTIIQYTETNE 491
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 9/154 (5%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D ++G N + + + + E T+ + ++G G+D ++G +N+
Sbjct: 311 MDQYPGGILGTESNDNIIGSPATDVVLAAEGADTLEGAGDGDYLLGGKGDDRILGEDSND 370
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-----VE 342
+ + GND G D +I+ + I+ E D L+ +
Sbjct: 371 ILSGNQGNDFVSGGVADDLVR--GGKGNDQIFGDDGEDILI--GERGTDRLTGGGGSDIF 426
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
LR ++ +L++ AS DLI + G
Sbjct: 427 ILRTDTGIEETNPANADWLLDFNASEGDLIGING 460
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 32/130 (24%), Gaps = 10/130 (7%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
I V ++G +N+ S DV + G DT Y
Sbjct: 306 ITEAVMDQYPGGILGTESNDNIIGSPATDVVLAAEGADTL----EGAGDGDYLLGGKGDD 361
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
E D LS ++ + + G+D+ +
Sbjct: 362 RILGEDSNDILSG------NQGNDFVSGGVADDLVRGGKGNDQIFGDDGEDILIGERGTD 415
Query: 388 EFGLSEGRDI 397
G DI
Sbjct: 416 RLTGGGGSDI 425
Score = 44.4 bits (103), Expect = 0.062, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 29/132 (21%), Gaps = 19/132 (14%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I ++++GS DVV+ + + D G G D +
Sbjct: 317 GILGTESNDNIIGSPATDVVLAAEGADTLEGAGDGDYLLGGKGDDRIL--GEDSNDILSG 374
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
+ V K + + LI G D
Sbjct: 375 NQGNDFVSGGVADDL-----------------VRGGKGNDQIFGDDGEDILIGERGTDRL 417
Query: 381 ESMKHFYEFGLS 392
F L
Sbjct: 418 TGGGGSDIFILR 429
>gi|323698688|ref|ZP_08110600.1| outer membrane adhesin like proteiin [Desulfovibrio sp. ND132]
gi|323458620|gb|EGB14485.1| outer membrane adhesin like proteiin [Desulfovibrio desulfuricans
ND132]
Length = 2133
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 47/127 (37%), Gaps = 6/127 (4%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
S +Y S GDD L G N +I G + ++ I+ +
Sbjct: 1899 TDTASENGDVMYGSDGDDTL----SGLGGNDFLYGEAGDDTIDGGAGHDYLSGGDGIDHL 1954
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G GND + G S ++V +GND G SG DT + + I V+ ++
Sbjct: 1955 YGGDGNDYLFGGSGDDVLHGGAGNDHLFGGSGNDTL--WGGAGDDVIDAGSGDDTVFISS 2012
Query: 332 EHKQDFL 338
H L
Sbjct: 2013 GHDTVTL 2019
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 54/441 (12%), Positives = 103/441 (23%), Gaps = 31/441 (7%)
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
V + F + +S + G + I + +
Sbjct: 1598 DVSHVNFSDVDGADSWDAVSDSIGLDVSGVTSVGTDSNIIQVGLLGIGLSSTDLALGYFD 1657
Query: 124 ALHEIGHALGLMHPGSYNGGYPV---YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYC 180
EIGH L G + + +G D E ++ + +D + +
Sbjct: 1658 GSGEIGHGLAPSPSGYVSATESIILDFGNDGVEEPQDVAVTLRNVGDTEDIVFTVTDTDG 1717
Query: 181 ATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
T + A G G + K +Q D G+ L+D I
Sbjct: 1718 NTYTFHTLGAANGTILTDAGGSGVTLLKSNNEQYVVQGTAVDGDGNGEVLIDTITITAGT 1777
Query: 241 NY------IDLNTES-WSSIGGYEKNMTI--AQHTVIESVVGSSGNDVV-------IGNS 284
N ID+ W G TI A ++E+ S + +G
Sbjct: 1778 NASFVLSAIDVTAGGSWQQTGTIPGTQTIVPASGNLLENAYSSDNAGMTAAIVGSGVGLW 1837
Query: 285 ANNVFFESSGN------------DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
++G+ D ++ F Y + V+
Sbjct: 1838 GTLTVDSATGDWTYTPRSDAFSADTATDGPTVEQFTYQVTDAHGLTETATLYVPVHHNAT 1897
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ + + +D + L A + + G D
Sbjct: 1898 VTDTASENGDVMYGSDGDDTLSGLGGNDFLYGEAGDDTIDGGAGHDYLSGGDGIDHLYGG 1957
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
+G D F + N + G + + H+ +
Sbjct: 1958 DGNDYLFGGSGDDVLHGGAGNDHLFGGSGNDTLWGGAGDDVIDAGSGDDTVFISSGHDTV 2017
Query: 453 INAFADAPDLVQVGKDHFSNF 473
+V
Sbjct: 2018 TLGAGADTIMVDPSYLTTGET 2038
>gi|260803725|ref|XP_002596740.1| hypothetical protein BRAFLDRAFT_129804 [Branchiostoma floridae]
gi|229281999|gb|EEN52752.1| hypothetical protein BRAFLDRAFT_129804 [Branchiostoma floridae]
Length = 592
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 49/152 (32%), Gaps = 23/152 (15%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEET-SIHSDIK 80
W + YK + L+ + A W++V LTF E +DI
Sbjct: 144 WDKTDLTYKFVSY----GDPTVLSLSESDIRYAVERAFAVWAEVAPLTFTEVWYGDADIN 199
Query: 81 FIS-----SNN----------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+N + P + +FD+ + W G G G + A
Sbjct: 200 IDFRRFYHGDNFPFDGAGGVLAHAFFP--GEGIGGDTHFDEDEPWSVGTGTGVDIFVTAS 257
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
HE GHALGL H Y D + +
Sbjct: 258 HEFGHALGLHHSSFPGSLMSPYYNYYDMDTFT 289
>gi|209524652|ref|ZP_03273199.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209494796|gb|EDZ95104.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 271
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 48/133 (36%), Gaps = 7/133 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + + I GG+D + D + G + + + + G E TI
Sbjct: 66 DDELFGTNGNDVILGRGGNDTIYGFMGDDFIDGQGGDDLIYGGQGNDILSGAEGRDTIFG 125
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G + +D++ GN N+ + GND G G D + S ++ +
Sbjct: 126 DIGDDIIYGGADDDLLFGNQGNDTIYGDGGNDTIYGGQGDD--YLVGGSGNDLLFGDQGN 183
Query: 325 IIVYDANEHKQDF 337
+ + + +
Sbjct: 184 DTLVGISRAGRGY 196
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 52/176 (29%), Gaps = 24/176 (13%)
Query: 219 IQTIYDSGGDDLLDLTLIGG-----VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
I T++ G+++ L + T + + G N I +++ G
Sbjct: 30 IDTLFGGPGNNVFLLQNHFDQLPPLSPATTQIGTNNDDELFGTNGNDVILGRGGNDTIYG 89
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G+D + G +++ + GND+ G+ G DT F I+Y +
Sbjct: 90 FMGDDFIDGQGGDDLIYGGQGNDILSGAEGRDTIF-----------GDIGDDIIYGGADD 138
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
L + + L+ G D+ +
Sbjct: 139 D--------LLFGNQGNDTIYGDGGNDTIYGGQGDDYLVGGSGNDLLFGDQGNDTL 186
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 47/132 (35%), Gaps = 5/132 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
I GGDDL+ GG N I E +I G + I
Sbjct: 82 GGNDTIYGFMGDDFIDGQGGDDLI----YGGQGNDILSGAEGRDTIFGDIGDDIIYGGAD 137
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-APSYLYKIYRFENAII 326
+ + G+ GND + G+ N+ + G+D G SG D F L I R
Sbjct: 138 DDLLFGNQGNDTIYGDGGNDTIYGGQGDDYLVGGSGNDLLFGDQGNDTLVGISRAGRGYT 197
Query: 327 VYDANEHKQDFL 338
+ + ++D +
Sbjct: 198 LIGDFDPEKDTV 209
Score = 45.2 bits (105), Expect = 0.041, Method: Composition-based stats.
Identities = 17/157 (10%), Positives = 41/157 (26%), Gaps = 12/157 (7%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEH 333
+ + F GN+VF + D + +++ ++ +
Sbjct: 25 VSTDEIDTLFGGPGNNVFLLQNHFDQLPPLSPATTQIGTNNDDELFGTNGNDVILGRGGN 84
Query: 334 KQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ + + + IL + + IG D+ +
Sbjct: 85 DTIYGFMGDDFIDGQGGDDLIYGGQGNDILSGAEGRDTIFGDIGDDIIYGGADDDLLFGN 144
Query: 393 EGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARH 425
+G D + + +Y G DD +
Sbjct: 145 QGNDTIYGDGGNDTIYGGQGDDYLVGGSGNDLLFGDQ 181
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 43/194 (22%), Gaps = 22/194 (11%)
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
D G G + F + + Q ++ + L + +
Sbjct: 31 DTLFGGPGNNVFLLQNHFDQ----------LPPLSPATTQIGTNNDDELFGTNGNDVILG 80
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ + + G D+ + +EGRD F DD+
Sbjct: 81 RGGNDTIYGFMGDDFIDGQGGDDLIYGGQGNDILSGAEGRDTIFGDI-----GDDIIYGG 135
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN--- 472
D + G + + L+ + G D
Sbjct: 136 ADDDLL----FGNQGNDTIYGDGGNDTIYGGQGDDYLVGGSGNDLLFGDQGNDTLVGISR 191
Query: 473 FGCEEGRFVTFDSY 486
G FD
Sbjct: 192 AGRGYTLIGDFDPE 205
>gi|198418259|ref|XP_002124733.1| PREDICTED: similar to matrix metalloproteinase 1 [Ciona
intestinalis]
Length = 511
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 60/197 (30%), Gaps = 58/197 (29%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETS-- 74
L+ W + + YK T+L+ + + R A W L F + +
Sbjct: 105 LKGGKWDHKQLTYKFINYP--------TKLSVSQSESEIRTAFQWWEDNSSLRFSKVTKG 156
Query: 75 IHSDIKFISS---------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTI 119
H+DI+ + + + P + FD+A+ W G
Sbjct: 157 EHADIEIMFAVGDHGDWDSFDGPGHTLAHAYFPVFGGNVH----FDEAEPWSISSASGVK 212
Query: 120 LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGY 179
L A HE GH+LGL H + N S
Sbjct: 213 LGTVAAHEFGHSLGLSHSDVTTALMAPFYSPNTKGLHS---------------------- 250
Query: 180 CATPMVSDIVAVQKIYG 196
DI AVQ++YG
Sbjct: 251 ------DDIQAVQELYG 261
>gi|332705377|ref|ZP_08425455.1| hypothetical protein LYNGBM3L_07490 [Lyngbya majuscula 3L]
gi|332355737|gb|EGJ35199.1| hypothetical protein LYNGBM3L_07490 [Lyngbya majuscula 3L]
Length = 1104
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 12/172 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ T+ + G+D + G + + + S SS + I +
Sbjct: 923 DETIIARAGNDTVAGALGNDTI---FGGNGDDVLRGDFNSRSSDNTLGGDDVIYGGAGSD 979
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +GND + G ++ + +G+D+ G G DT F S +
Sbjct: 980 RIGGKAGNDSLFGQKGDDQIWGDAGDDLLRGGLGNDTLFGDNGSGGDG------SDTFIL 1033
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
A D + + ++ I + L T + + G +
Sbjct: 1034 AAGEGTDT---IGDFQVSEDFIGLADGLTFGQLSVTQESNNAVISFGDETLA 1082
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 39/144 (27%), Gaps = 16/144 (11%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + +VG+ ++ +I + N+ + GND G +G D S
Sbjct: 913 LDDELVGTEADETIIARAGNDTVAGALGNDTIFGGNGDDVLRGDFNSRS---SDNTLGGD 969
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF------ 380
D R+ K + A + L +G D
Sbjct: 970 DVIYGGAGSD------RIGGKAGNDSLFGQKGDDQIWGDAGDDLLRGGLGNDTLFGDNGS 1023
Query: 381 -ESMKHFYEFGLSEGRDITFDSYL 403
+ EG D D +
Sbjct: 1024 GGDGSDTFILAAGEGTDTIGDFQV 1047
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 39/158 (24%), Gaps = 26/158 (16%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ +D ++G A+ +GND G+ G DT F
Sbjct: 910 GTPLDDELVGTEADETIIARAGNDTVAGALGNDTIF----------------------GG 947
Query: 333 HKQDFLSDVERLRFAD----QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ D L R +D + A + L G D
Sbjct: 948 NGDDVLRGDFNSRSSDNTLGGDDVIYGGAGSDRIGGKAGNDSLFGQKGDDQIWGDAGDDL 1007
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
G D F G D + + +
Sbjct: 1008 LRGGLGNDTLFGDNGSGGDGSDTFILAAGEGTDTIGDF 1045
>gi|318606426|emb|CBY27924.1| calcium-dependent protease precursor [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 1280
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 54/372 (14%), Positives = 100/372 (26%), Gaps = 49/372 (13%)
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
+ +P + + H + A L Y G
Sbjct: 524 FASSPVSNRIIKRDAYGAFIHSGSGEATTTAYAQLTNRHRVLSANRLKVSNLYGGSGNDV 583
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL--GNN 205
S + ++ + SD K G L G
Sbjct: 584 LKAGT------QGSWLVGRGGSNTYVGNRGDDVFVISASDDPKNIKGNGGRDTVLIVGKK 637
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + + Q G D D+ + GG + +++ G + + +A
Sbjct: 638 AVTLNMARSGVTLAQ------GGDGDDVIISGGNNSVFIKGGRGNTTLVGGDGDDVLAGG 691
Query: 266 TVIESVVGSSGNDVVIGN------------------SANNVFFESSGNDVF--------- 298
+++G SG V+ + + GNDV
Sbjct: 692 IGKNTIIGGSGKAVIYAGPQGDTIYAAEQGSIIHAGGGADKIYGGKGNDVIEAGQGNALI 751
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSVNV 356
DG G++ + Y I R + + D A L ++++L F+D
Sbjct: 752 DGGGGINVVSLHGTHADYIITRTASGYQIRDKVAGRDGTLALKNIQKLNFSDISAID--- 808
Query: 357 KQRSILEYTASYEDLIQ-VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
Q + + L G+ + S H D+ F+ L V
Sbjct: 809 LQEDTIVPID--DVLTTNWHGKPLIRSDVHLIRGANLLANDLRFNDKSVLRISAVSDAVG 866
Query: 416 GSDRGAAARHYI 427
G R +AA + +
Sbjct: 867 GRVRLSAAGNIV 878
>gi|35903106|ref|NP_919395.1| matrix metalloproteinase-14 [Danio rerio]
gi|32251078|gb|AAP74484.1| membrane-type matrix metalloproteinase 1 beta [Danio rerio]
Length = 621
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 40/146 (27%), Gaps = 31/146 (21%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--- 74
++ W I + T ++ E R A W V L F E S
Sbjct: 107 IQGLKWDKNEITFCIQNYTPKVGEYETFE-------AIRKAFKVWESVTPLRFREISYSD 159
Query: 75 ------IHSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYG 113
+DI ++ + P + +
Sbjct: 160 IRDKVVDFADIMLFFADGFHGDASPFDGEGGFLAHAYFPGNGIGGDTHFDAAEPWTIGNK 219
Query: 114 IGKGTILSHNALHEIGHALGLMHPGS 139
G + A+HE+GHALG+ H
Sbjct: 220 DLLGNDVFLVAVHELGHALGMEHSND 245
>gi|47523560|ref|NP_999404.1| matrix metalloproteinase-14 precursor [Sus scrofa]
gi|11386723|sp|Q9XT90|MMP14_PIG RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
Full=Membrane-type matrix metalloproteinase 1;
Short=MT-MMP 1; Short=MTMMP1; AltName:
Full=Membrane-type-1 matrix metalloproteinase;
Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
gi|5051632|gb|AAD38324.1|AF067419_1 membrane-type 1 matrix metalloproteinase [Sus scrofa]
Length = 580
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 112 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 164
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 165 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 224
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 225 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 266
>gi|113476310|ref|YP_722371.1| hemolysin-type calcium-binding protein [Trichodesmium erythraeum
IMS101]
gi|110167358|gb|ABG51898.1| Hemolysin-type calcium-binding region [Trichodesmium erythraeum
IMS101]
Length = 327
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/290 (10%), Positives = 76/290 (26%), Gaps = 7/290 (2%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ + ++ + + I D ++ + V + + + + +
Sbjct: 27 DTLPTVDRPIEGGDGGRDIQGGPTADAIEGSTASDVVST----GAGDDLVAAGDGDDDVL 82
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T ++V+ +G D + GN N+ +G+D+ G G D+ ++
Sbjct: 83 LGTGDDTVLAGTGVDTISGNQGNDSVAGGAGDDLLYGGKGDDSV--EGGEGADFVFGDRG 140
Query: 324 AIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ +V D + + + K IL + L G D
Sbjct: 141 SDLVQGGAGDDVALGGRDSDTVTGDEGNDTLDGGKGDDILSGGVGDDFLFGGKGSDTLTG 200
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
+F D ++ D + G A
Sbjct: 201 GTGADKFLFYYNEDGSYGLDSLTDFNRDQGDKIGIVVNNFGGGNFEALTGARPGDSLSGA 260
Query: 443 LEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
+ + A++ ++ + + ++ +
Sbjct: 261 QFAVVENFSPNEDGANSAAIIYDPDTGLVYYNPDGSAVAGNETPIARVDN 310
Score = 52.5 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 72/297 (24%), Gaps = 3/297 (1%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+D + GG + +I G + ++ + V G+D V+ + ++
Sbjct: 31 TVDRPIEGGDGGRDIQGGPTADAIEGSTASDVVSTGAGDDLVAAGDGDDDVLLGTGDDTV 90
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDVERLRFAD 348
+G D G+ G D+ + +Y + V F + ++
Sbjct: 91 LAGTGVDTISGNQGNDSV--AGGAGDDLLYGGKGDDSVEGGEGADFVFGDRGSDLVQGGA 148
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
++ + + + L G D+ +G D
Sbjct: 149 GDDVALGGRDSDTVTGDEGNDTLDGGKGDDILSGGVGDDFLFGGKGSDTLTGGTGADKFL 208
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
+ G K G + F + A V
Sbjct: 209 FYYNEDGSYGLDSLTDFNRDQGDKIGIVVNNFGGGNFEALTGARPGDSLSGAQFAVVENF 268
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 525
+ G + + D V G++ A F+
Sbjct: 269 SPNEDGANSAAIIYDPDTGLVYYNPDGSAVAGNETPIARVDNTVFDSNNPLQGTDFE 325
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 54/193 (27%), Gaps = 9/193 (4%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
G G G D S + V+S D + D +
Sbjct: 38 GGDGGRDIQGGPTADAIEGSTASDVVSTGAGDDLVAAGDGDDDVLLGTGDDTVLAGT--G 95
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
GN + +Y GDD ++ GG + G
Sbjct: 96 VDTISGN---QGNDSVAGGAGDDLLYGGKGDD----SVEGGEGADFVFGDRGSDLVQGGA 148
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ ++V G GND + G +++ G+D G G DT + +
Sbjct: 149 GDDVALGGRDSDTVTGDEGNDTLDGGKGDDILSGGVGDDFLFGGKGSDTLTGGTGADKFL 208
Query: 318 IYRFENAIIVYDA 330
Y E+ D+
Sbjct: 209 FYYNEDGSYGLDS 221
>gi|525329|gb|AAA20544.1| HlyA [Escherichia coli]
Length = 758
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 54/200 (27%), Gaps = 33/200 (16%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 480 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 535
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 536 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYG 595
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 596 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKAINGVLSFNESND 649
Query: 370 D----LIQVIGQDVFESMKH 385
+D + H
Sbjct: 650 VNGITFKNWFAKDASGADNH 669
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 46/164 (28%), Gaps = 19/164 (11%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G I +E ++G +D G N++F + GND +G+ G D +
Sbjct: 445 FEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLY- 503
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + ++ + + +L D L+ +Y
Sbjct: 504 -GDDGDDYISGGQGDDQLFGGSGND--------KLSGGDGNNYLTGGSGNDELQAHGAYN 554
Query: 370 DLIQVIGQDVFE---------SMKHFYEFGLSEGRDITFDSYLY 404
L G D + G DI Y
Sbjct: 555 ILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNY 598
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 55/197 (27%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 441 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 496
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 497 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 556
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + H ++ G + R
Sbjct: 557 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNYGHHTIADEGGKGDRLHLS 616
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 617 DISFDDIAFKRVGNDLI 633
Score = 42.5 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 62/236 (26%), Gaps = 29/236 (12%)
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN----AIIVYDANEHK------- 334
++V + +G+ G DT Y + N +
Sbjct: 365 DDVVYSGAGSSEVFAGEGYDTVSYNKTDVGKLTIDATGASKPGEYIVSKNMYGDVKVLQE 424
Query: 335 ------QDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
E++++ D + +++ S E+LI D F+ K
Sbjct: 425 VVKEQEVSVGKRTEKIQYRDFEFRTGG-IPYDVIDNLHSVEELIGGKHDDEFKGGKFNDI 483
Query: 389 FGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRGAAARH-----YITHGVKEGRNPDA 439
F ++G D + LY DD + D G
Sbjct: 484 FHGADGNDYIEGNYGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSG 543
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF--DSYLYLGSYD 493
L+ ++ L D G D + F D Y+Y +Y
Sbjct: 544 NDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYGQNYG 599
>gi|113477328|ref|YP_723389.1| lipase [Trichodesmium erythraeum IMS101]
gi|110168376|gb|ABG52916.1| lipase [Trichodesmium erythraeum IMS101]
Length = 709
Score = 63.7 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/212 (14%), Positives = 68/212 (32%), Gaps = 5/212 (2%)
Query: 223 YDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
D GDD++ D +L G N + ++ N I + + ++G SGN
Sbjct: 497 VDKSGDDIMRGSENDDSLNSGPGNDKIIGKGGNDTLNSGPGNDKIFGQSGDDYLIGRSGN 556
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D+++G ++ G D +G G D + + DF
Sbjct: 557 DILLGGKGDDTLEGGIGRDRLNGGPGNDELIGGGSIDFFIFNTNRPFNEEDLGKDIITDF 616
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
D + + D++ S S + +V+ D + +E ++
Sbjct: 617 KVDQDFILLDKSTFDAIESDSSSRKNPGFSRVEEFEVVETDESAASSEAIIVHSTETGNL 676
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
++ + + ++ ++I
Sbjct: 677 FYNQNGSASGFGTGGDFATVAPELSSENFILR 708
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 16/115 (13%)
Query: 202 LGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G++I + + P I GG+D L+ + I G
Sbjct: 500 SGDDIMRGSENDDSLNSGPGNDKIIGKGGNDTLN-------------SGPGNDKIFGQSG 546
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ + + + ++G G+D + G + GND G +D F +
Sbjct: 547 DDYLIGRSGNDILLGGKGDDTLEGGIGRDRLNGGPGNDELIGGGSIDFFIFNTNR 601
>gi|254466787|ref|ZP_05080198.1| bifunctional hemolysin-adenylate cyclase (Cyclolysin)
(ACT)(AC-HLY) [Rhodobacterales bacterium Y4I]
gi|206687695|gb|EDZ48177.1| bifunctional hemolysin-adenylate cyclase (Cyclolysin) (ACT)(AC-HLY)
[Rhodobacterales bacterium Y4I]
Length = 451
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/359 (14%), Positives = 94/359 (26%), Gaps = 24/359 (6%)
Query: 63 SKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
S V ++ + T ++ F S G D F+++N D G+ +
Sbjct: 19 SSVSNVEVQVTVPNASSTFTYSIIGR----DDDGVAFIDMNDDVLQAISGGVNLNNPSFN 74
Query: 123 NALHEI---------GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
E G ++ L S + + D+ +
Sbjct: 75 FLSDETILTQVTWSGGTSVILGVTFETGDNTDTEFYFVIDGAALPQVSSPADWNAFDATI 134
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLL 231
++A + + + Y S G D
Sbjct: 135 SGPSDPAGALAAGQVIAWSSLA-TTSSTEDDEFYGTAGRDTFNGGAGDDFFVSSDGRDTY 193
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT----VIESVVGSSGNDVVIGNSANN 287
+ + + ++ G T IE++ GS+ +D + GN N
Sbjct: 194 NGGSGSFDQVAFTNDPSGVTAHLGKGTATDGWGKTDTLKSIEALRGSAHDDKLTGNGKAN 253
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPS---YLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
F GND +G G D Y + D +D L +ER
Sbjct: 254 YFRGIEGNDTINGGKGQDEVRYDRDERYGGEDGVTVNLAKGFAIDGFGD-RDTLKSIERA 312
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
R ++ + + L + L G D+ + G D F
Sbjct: 313 RGSESADKLLGNGGGNRLMGLGGNDTLSGKGGDDLILGGAGRDKILGDGGNDELFGEGG 371
Score = 41.7 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 36/117 (30%), Gaps = 11/117 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID--LNTESWSSIGGYEKNMTIAQH 265
+ + I G D L D L + + G N T++
Sbjct: 283 GEDGVTVNLAKGFAIDGFGDRDTLKSIERARGSESADKLLGNGGGNRLMGLGGNDTLS-- 340
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
G G+D+++G + + GND G G D F + + FE
Sbjct: 341 -------GKGGDDLILGGAGRDKILGDGGNDELFGEGGADRFIFKGAFGDDTVSDFE 390
>gi|325982593|ref|YP_004294995.1| hypothetical protein NAL212_1996 [Nitrosomonas sp. AL212]
gi|325532112|gb|ADZ26833.1| hypothetical protein NAL212_1996 [Nitrosomonas sp. AL212]
Length = 1231
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/317 (16%), Positives = 92/317 (29%), Gaps = 16/317 (5%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
F+ ++ G + + G+ S G + G+
Sbjct: 827 FVGNSYGNALFFKNTGTANNPVFAAAKPNRFGLRDVGSNASPTFTDIDGDGDWDVFMGNS 886
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
G + N F T+ ++ F D A+ + D+ A
Sbjct: 887 AGNTLFFRNTGTASNPVFATANINRFGLSDVGYSANPTFVDIDSDGDLDAFVGNNDGNMQ 946
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
NN + + T +D + L G NT S +++G +
Sbjct: 947 FYVNNGLLLTSTVGNDILAGTP---SNNDTVTYGLAIGPVTVSLSNTNSQNTLGAGLDTL 1003
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPS 313
T IE+++GS+ NDV+ G++ NN G+D +G+ G D Y
Sbjct: 1004 -----TAIENIIGSAFNDVLTGDAKNNALTGRGGHDTLNGAGGADVMAGGFGNDVYTVNV 1058
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLI 372
+ N + ++VE L I+ +I+ L
Sbjct: 1059 PGDVVTENFNQGSDKINSSVTYTLPANVENLTLTGTGAINGTGNDLANIIIGNTGNNQLD 1118
Query: 373 QVIGQDVFESMKHFYEF 389
G + F
Sbjct: 1119 GGAGNNTLTGGLGNDFF 1135
Score = 39.8 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 44/360 (12%), Positives = 101/360 (28%), Gaps = 25/360 (6%)
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
GS+ TF + ++ +A + V
Sbjct: 863 GSNASPTFTDIDGDGDWDVFMGNSAGNTLFFRNTGTASNPVFATANINRFGLSDVGYSAN 922
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN---VFG 416
S DL +G + M+ + GL + D S +D G
Sbjct: 923 PTFVDIDSDGDLDAFVGNNDGN-MQFYVNNGLLLTSTVGNDILAGTPSNNDTVTYGLAIG 981
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA-DAPDLVQVGKDHFSNFGC 475
+ + + + G + ++ D++ A + + G D + G
Sbjct: 982 PVTVSLSNTNSQNTLGAGLDTLTAIENIIGSAFNDVLTGDAKNNALTGRGGHDTLNGAGG 1041
Query: 476 EEGRFVTFDSYLYLGSYDDLRNV----FGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 531
+ F + +Y + GSD+ ++ Y E A+
Sbjct: 1042 ADVMAGGFGNDVYTVNVPGDVVTENFNQGSDKINSSVTYTLPANVENLTLTGTGAINGTG 1101
Query: 532 SH--EDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVF-GSDRS 588
+ +I + AG + + G F + D+ + ++ +
Sbjct: 1102 NDLANIIIGNTGNNQLDGGAGNN--TLTGGLGNDFFKFTT----AGHVDVITDYNVTNDT 1155
Query: 589 AAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
++ + + ++ +F+ N A+ ++ ++ L D G+G
Sbjct: 1156 IQLENAVFTALTV--TGTLAAARFRIGAN-----ALDANDNIIYNSATGALIYDANGNGA 1208
>gi|229588903|ref|YP_002871022.1| putative hemolysin-like protein [Pseudomonas fluorescens SBW25]
gi|229360769|emb|CAY47627.1| putative hemolysin-like protein [Pseudomonas fluorescens SBW25]
Length = 496
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 46/193 (23%), Gaps = 37/193 (19%)
Query: 207 YKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
Y + P I GDD + + V I+ + I N +I
Sbjct: 99 YTFNTGDGHSNVPTFLHIKTGAGDDRITIDPTVTVPVEIE-AEDGDDVIQAGGGNTSIYG 157
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + SG GN ++ G+ V G++G D + +
Sbjct: 158 GRGNDHIRLGSGIGYAEGNEGDDTIIGGPGHAVMYGNNGNDRLYASHGPNSKHSH----- 212
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
L Y L G D
Sbjct: 213 ----------------------------LDGGTGDDKLYAGDGYSVLNGGQGDDTLVGYT 244
Query: 385 HFYEFGLSEGRDI 397
H F EGRD
Sbjct: 245 HT-TFYTGEGRDT 256
>gi|167648203|ref|YP_001685866.1| hemolysin-type calcium-binding region [Caulobacter sp. K31]
gi|167350633|gb|ABZ73368.1| Hemolysin-type calcium-binding region [Caulobacter sp. K31]
Length = 539
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 50/187 (26%), Gaps = 48/187 (25%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES----------WSSIGGYEKNMTI 262
+ ++D+GG D L IDL S SS G TI
Sbjct: 10 NQAGTSYSCLWDAGGVDTLSAEGASIAC-TIDLREASLLNEAGGGGWLSSGSGIYGGFTI 68
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
A IE+ +G +D+V GN N GND G G D
Sbjct: 69 AHDAKIENAIGGEADDIVTGNGLANKILGGGGNDNLSGELGAD----------------- 111
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
L D L+ +++ LI G DV
Sbjct: 112 --------------------VLLGGDGSDSLDGGLGNDTLDGGRNFDVLIGGAGADVLIG 151
Query: 383 MKHFYEF 389
F
Sbjct: 152 GSGNDRF 158
>gi|153010110|ref|YP_001371324.1| hemolysin-type calcium-binding region [Ochrobactrum anthropi ATCC
49188]
gi|151561998|gb|ABS15495.1| Hemolysin-type calcium-binding region [Ochrobactrum anthropi ATCC
49188]
Length = 518
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/327 (15%), Positives = 95/327 (29%), Gaps = 27/327 (8%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G + ID +++I N + T + + G +G+D ++G ++ SG+
Sbjct: 133 TGAGNDTIDATGFQFANIHAGAGNDYVRGGTGNDQITGGAGHDNLLGGDGDDQIKGGSGD 192
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
DV DG +G DT K+ + + D L+ D
Sbjct: 193 DVIDGGNGNDTL--SGNDGNDKLSGGRGNDTLM--GDEGNDTLNG------GDGNDRLYG 242
Query: 356 VKQRSILEYTASYEDLI-QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
IL A + L D F Y G + ++
Sbjct: 243 GAGTDILLGGAGDDYLQNTGTDGDTLFGGDGNDYFTAGSI------DSGYSGYWFEMHGG 296
Query: 415 FGSDRGAAARHYITHGVKEGRNPD----AFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
G+D + + G D F + + + ++ +
Sbjct: 297 AGNDTFSIYSDGGLGTIDGGDGIDTLAVTFDDVAAGFKFDAADYNSTEVFNISVISAYQG 356
Query: 471 SN--FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
+ G + R V+ +SY S +D N G + + G+ + L
Sbjct: 357 AQVFGGNGDDRIVSIESYREGLSGNDTYNGRGGNDVI----HGAFGLDSLLGGEGDDKLY 412
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFS 555
AS + L+ D F
Sbjct: 413 GGASSDRLLGGTGADTLSGGTEADTFI 439
Score = 43.6 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 37/295 (12%), Positives = 70/295 (23%), Gaps = 40/295 (13%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
GN+ + T+ G+D L G + + + +GG
Sbjct: 200 GNDTLSGND---GNDKLSGGRGNDTLMGDEGNDTL---NGGDGNDRLYGGAGTDILLGGA 253
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANN-------VFFESSGNDV-----------F 298
+ T +++ G GND S ++ +GND
Sbjct: 254 GDDYLQNTGTDGDTLFGGDGNDYFTAGSIDSGYSGYWFEMHGGAGNDTFSIYSDGGLGTI 313
Query: 299 DGSSGLDT--FFYYAPSYLYKIYRFENAIIVYDA-------------NEHKQDFLSDVER 343
DG G+DT + + +K + + D + +E
Sbjct: 314 DGGDGIDTLAVTFDDVAAGFKFDAADYNSTEVFNISVISAYQGAQVFGGNGDDRIVSIES 373
Query: 344 LRFADQCIDSVNV-KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
R D+ N ++ + L+ G D G D
Sbjct: 374 YREGLSGNDTYNGRGGNDVIHGAFGLDSLLGGEGDDKLYGGASSDRLLGGTGADTLSGGT 433
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
D ++ +D + G +
Sbjct: 434 EADTFIWDNASLQSNDIDHVTDFDVQGGDVLLFRDTEVITDFASFVAASVDTPDG 488
Score = 38.6 bits (88), Expect = 3.9, Method: Composition-based stats.
Identities = 38/305 (12%), Positives = 77/305 (25%), Gaps = 29/305 (9%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+VG++ D + N+ + +GND+ DG G D A +
Sbjct: 4 IVGTNDADTIFDTEENDRIWALAGNDIVDGGLGSDIIDGGAGDDVLTTTWRNVPEFDELN 63
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
D L F+ +++ ++ D +
Sbjct: 64 GASGNDRL----IFNFSGGA-ARGGEGVDTLVTDLSNRSDSVAFNAMQGHA--------Y 110
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
+G Y +L+ G+D A F + A ++
Sbjct: 111 WGDGSSSFDHLYFTDLERLNLKTGAGNDTIDATGF-------------QFANIHAGAGND 157
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
+ + G D+ ++ + G + +
Sbjct: 158 YVRGGTGNDQITGGAGHDNLLGGDGDDQIKGGSGDDVIDGGNGNDTLSGNDGNDKLS--- 214
Query: 511 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
G + L ++ L L AG D+ N G + + +
Sbjct: 215 GGRGNDTLMGDEGNDTLNGGDGNDRLYGGAGTDILLGGAGDDYLQNTGTDGDTLFGGDGN 274
Query: 571 LYLTS 575
Y T+
Sbjct: 275 DYFTA 279
>gi|291237326|ref|XP_002738586.1| PREDICTED: matrix metalloproteinase 24 preproprotein-like
[Saccoglossus kowalevskii]
Length = 525
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 42/142 (29%), Gaps = 25/142 (17%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + YK T D +E R A W V LTF E DI
Sbjct: 110 WEKNDLTYKILNYTPDLAEADTSE-------TIRLAFDIWQAVTPLTFTEIYDGTPDINI 162
Query: 82 IS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ + P + +FD + + GT L A H
Sbjct: 163 LFARGYHGDGGPFDGPGGTLAHAYFP--GGGLGGDAHFDDDETFTIRTYDGTNLLQVAAH 220
Query: 127 EIGHALGLMHPGSYNGGYPVYG 148
E GH+LGL H Y Y
Sbjct: 221 EFGHSLGLGHSSVYGALMAPYY 242
>gi|37726915|gb|AAO63001.1| stromelysin 3 [Necturus maculosus]
Length = 203
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 51/154 (33%), Gaps = 41/154 (26%)
Query: 58 ALGEWSKVVDLTFEETSIH-SDIKFISSNNGYV-CTPRYDSRYF------------MEIN 103
AL WS V LTF E + +DI + + P +++
Sbjct: 1 ALQVWSDVTSLTFTEVNEGRADIIIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVH 60
Query: 104 FDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVM 163
FD + W G GT L A HE GH LGL H S S+M
Sbjct: 61 FDYDETWTIGNDLGTDLLQVAAHEFGHVLGLQHS-------------------SVAKSLM 101
Query: 164 SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
S +F Y + D +Q +YG
Sbjct: 102 S--------PFYTFRYPLSLSEDDRQGIQHLYGG 127
>gi|300869290|ref|ZP_07113881.1| hypothetical protein OSCI_4020005 [Oscillatoria sp. PCC 6506]
gi|300332667|emb|CBN59079.1| hypothetical protein OSCI_4020005 [Oscillatoria sp. PCC 6506]
Length = 991
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 59/214 (27%), Gaps = 20/214 (9%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G + + +I + T+ + + G ND + GN+ + +G+
Sbjct: 136 QGTNLDDYLIGGPRNDTISARPGDDTVFGGDGPDLLRGEENNDYLNGNAGRDTVEGGAGD 195
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCID 352
D G D Y + IV+ D L + LR +
Sbjct: 196 DSVRGGKDDDLV--SGDQGSDTTYGDQGNDIVF--GSEGNDTLFGGKGNDCLRGGGEDDL 251
Query: 353 SVNVKQRSILEYTASYEDLIQVI---------GQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ L + ++ G D EG DI +
Sbjct: 252 VSGDRGNDTLFGDTGNDTVLGGGGSDLLLGQEGGDRINGGAGNDTASGGEGDDIIYGGEG 311
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D+L G D + R T EGR+
Sbjct: 312 ----NDELAGDSGDDVLSGDRGSDTFTGGEGRDT 341
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 74/268 (27%), Gaps = 17/268 (6%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALG--LMHPGSYNGGYPVYGVDNDYENDSFLT 160
+ D G TI + + G L+ N + E +
Sbjct: 137 GTNLDDYLIGGPRNDTISARPGDDTVFGGDGPDLLRGEENNDYLNGNAGRDTVEGGAGDD 196
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY---KIEVQQKDSP 217
SV D +DIV + G GN+ +
Sbjct: 197 SVRGGKDDDLVSGDQGSDTTYGDQGNDIVFGSEGNDTLFGGKGNDCLRGGGEDDLVSGDR 256
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
T++ G+D + + E I G N T + + + G GN
Sbjct: 257 GNDTLFGDTGNDTVLGGGGSDLLLG----QEGGDRINGGAGNDTASGGEGDDIIYGGEGN 312
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA--------PSYLYKIYRFENAIIVYD 329
D + G+S ++V G+D F G G DTF S
Sbjct: 313 DELAGDSGDDVLSGDRGSDTFTGGEGRDTFVIGRFSTQPASLSSGSATTGGVNLTDADLI 372
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ D ++ LRFAD I
Sbjct: 373 RDFTDDDAIALTGDLRFADLEISQGTGS 400
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/212 (11%), Positives = 47/212 (22%), Gaps = 8/212 (3%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDA- 330
VV G + ++ ND G DT F + V
Sbjct: 134 VVQGTNLDDYLIGGPRNDTISARPGDDTVFGGDGPDLLRGEENNDYLNGNAGRDTVEGGA 193
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ D + + + + I+ + + L G D
Sbjct: 194 GDDSVRGGKDDDLVSGDQGSDTTYGDQGNDIVFGSEGNDTLFGGKGNDCLRGGGEDDLVS 253
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G D F + + R G + + ++
Sbjct: 254 GDRGNDTLFGDTGNDTVLGGGGSDLLLGQEGGDRINGGAGNDTASGGEGDDIIYGGEGND 313
Query: 451 DLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
+L D G D F+ + +
Sbjct: 314 ELAGDSGDDVLSGDRGSDTFTGGEGRDTFVIG 345
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 46/136 (33%)
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
I+++ +LG + T S G T V + L
Sbjct: 744 IISLSTTKAGSTVNLGGTGVQFTPAGAAGTVAFTYTISDGFGTSPGTAAATVNVQVFLAD 803
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++I G +++ G+ ND + G N+V +G D G G +TF
Sbjct: 804 SGANTIVGGSFPDNFNGLAGSDTIDGAGANDTINGGLDNDVLIGGAGVDSMSGGGGNNTF 863
Query: 308 FYYAPSYLYKIYRFEN 323
Y +P+ ++ +
Sbjct: 864 RYTSPTDGGAVFEAAS 879
>gi|218248619|ref|YP_002373990.1| RTX cytolytic toxin protein A [Cyanothece sp. PCC 8801]
gi|218169097|gb|ACK67834.1| RTX cytolytic toxin protein A [Cyanothece sp. PCC 8801]
Length = 1394
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + I + + + G+SGND +IGN+ ++V +GND+ G SG DTF Y
Sbjct: 1268 IAGTSADDLINGTSGNDILTGNSGNDTLIGNAGDDVLTGGTGNDLLSGGSGGDTFNYQLG 1327
Query: 313 SYLYKIYRFENAIIV 327
+I F++ +
Sbjct: 1328 DGSDRIQDFQSGDTI 1342
Score = 38.6 bits (88), Expect = 3.1, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 17/86 (19%), Gaps = 3/86 (3%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ IL + + LI G DV G D
Sbjct: 1268 IAGTSADDLINGTSGNDILTGNSGNDTLIGNAGDDVLTGGTGNDLLSGGSGGDT---FNY 1324
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITH 429
LG D F S
Sbjct: 1325 QLGDGSDRIQDFQSGDTINLTGINAS 1350
>gi|163739110|ref|ZP_02146522.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
gi|161387510|gb|EDQ11867.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
Length = 307
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 4/117 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ G D L G + + I G +
Sbjct: 144 GNDFLTGGLGADVLRGGSGADTL----HGNGGDDVLRGGVGRDVIFGGVGADLLGGGRGN 199
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ ++G SG+D + G + + + +G+DV G G D F + + +I FE +
Sbjct: 200 DRLIGGSGSDTIRGGAGVDRLYGGTGDDVMTGGDGADIFVFNEGDHTDRITDFEVGV 256
Score = 45.2 bits (105), Expect = 0.042, Method: Composition-based stats.
Identities = 21/166 (12%), Positives = 41/166 (24%), Gaps = 41/166 (24%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ +T + + ++ +G D + + ++ +GND G G D
Sbjct: 106 GDDQITALLNDNVTAIRTYAGGDRISLGAGDDTVAAGAGNDFLTGGLGAD---------- 155
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
LR +L + + +
Sbjct: 156 ---------------------------VLRGGSGADTLHGNGGDDVLRGGVGRDVIFGGV 188
Query: 376 GQDVFESMKHFYEFGLSEGRDITFD----SYLYLGSYDDLRNVFGS 417
G D+ + G D LY G+ DD+
Sbjct: 189 GADLLGGGRGNDRLIGGSGSDTIRGGAGVDRLYGGTGDDVMTGGDG 234
>gi|291568562|dbj|BAI90834.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 271
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 50/176 (28%), Gaps = 24/176 (13%)
Query: 219 IQTIYDSGGDDLLDLTLIGG-----VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
I T++ G+++ L + T + G N I +++ G
Sbjct: 30 IDTLFGGPGNNVFLLQNHFDQLPPLSPATTQIGTNDDDELFGTNGNDVILGRGGNDTIYG 89
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G+D + G ++ + GND+ G+ G DT F I+Y +
Sbjct: 90 FMGDDFIDGQGGDDRIYGGQGNDILSGAEGRDTIF-----------GDIGDDIIYGGADD 138
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
L + + L+ G D+ +
Sbjct: 139 D--------LLFGNQGNDTIYGDGGNDTIYGGQGDDYLVGGSGNDLLFGDQGNDTL 186
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 47/133 (35%), Gaps = 7/133 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + + I GG+D + D + G + + + G E TI
Sbjct: 66 DDELFGTNGNDVILGRGGNDTIYGFMGDDFIDGQGGDDRIYGGQGNDILSGAEGRDTIFG 125
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + G + +D++ GN N+ + GND G G D + S ++ +
Sbjct: 126 DIGDDIIYGGADDDLLFGNQGNDTIYGDGGNDTIYGGQGDD--YLVGGSGNDLLFGDQGN 183
Query: 325 IIVYDANEHKQDF 337
+ + + +
Sbjct: 184 DTLVGISRAGRGY 196
Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 46/132 (34%), Gaps = 5/132 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
I GGDD + GG N I E +I G + I
Sbjct: 82 GGNDTIYGFMGDDFIDGQGGDDRI----YGGQGNDILSGAEGRDTIFGDIGDDIIYGGAD 137
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY-APSYLYKIYRFENAII 326
+ + G+ GND + G+ N+ + G+D G SG D F L I R
Sbjct: 138 DDLLFGNQGNDTIYGDGGNDTIYGGQGDDYLVGGSGNDLLFGDQGNDTLVGISRAGRGYT 197
Query: 327 VYDANEHKQDFL 338
+ + ++D +
Sbjct: 198 LIGDFDPEKDTV 209
Score = 45.5 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 17/157 (10%), Positives = 41/157 (26%), Gaps = 12/157 (7%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEH 333
+ + F GN+VF + D + +++ ++ +
Sbjct: 25 VSTDEIDTLFGGPGNNVFLLQNHFDQLPPLSPATTQIGTNDDDELFGTNGNDVILGRGGN 84
Query: 334 KQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ + + + IL + + IG D+ +
Sbjct: 85 DTIYGFMGDDFIDGQGGDDRIYGGQGNDILSGAEGRDTIFGDIGDDIIYGGADDDLLFGN 144
Query: 393 EGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARH 425
+G D + + +Y G DD +
Sbjct: 145 QGNDTIYGDGGNDTIYGGQGDDYLVGGSGNDLLFGDQ 181
Score = 37.1 bits (84), Expect = 9.6, Method: Composition-based stats.
Identities = 13/143 (9%), Positives = 31/143 (21%), Gaps = 3/143 (2%)
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ + ++ + + +G D + +G DI +
Sbjct: 63 TNDDDELFGTNGNDVILGRGGNDTIYGFMGDDFIDGQGGDDRIYGGQGNDILSGAEGRDT 122
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
+ D+ + + G + + L+ + G
Sbjct: 123 IFGDIGDDIIYGGADDDLLFGNQGNDTIYGDGGNDTIYGGQGDDYLVGGSGNDLLFGDQG 182
Query: 467 KDHFSN---FGCEEGRFVTFDSY 486
D G FD
Sbjct: 183 NDTLVGISRAGRGYTLIGDFDPE 205
>gi|311267841|ref|XP_003131763.1| PREDICTED: matrix metalloproteinase-28-like [Sus scrofa]
Length = 521
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 53/169 (31%), Gaps = 42/169 (24%)
Query: 49 PNAQEVARWALGEWSKVVDLTFEET--SIHSDIKFIS----SNNGYVCTPRYDSRYF--- 99
P + R A WS V L F E + +DI+ N+G
Sbjct: 150 PAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLSNAFDGPGGALAHA 209
Query: 100 -----MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP-GSYNGGYPVYGVDNDY 153
E +FD+ + W +G L HEIGH LGL H P Y
Sbjct: 210 FLPRRGEAHFDRDERWSLSRRRGRNLFVVLAHEIGHTLGLTHSAAPRALMAPYYKRLGRD 269
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
S+ D++AVQ +YG P+G
Sbjct: 270 ALLSWD---------------------------DVLAVQNLYGKPQGGS 291
>gi|212709812|ref|ZP_03317940.1| hypothetical protein PROVALCAL_00860 [Providencia alcalifaciens DSM
30120]
gi|212687623|gb|EEB47151.1| hypothetical protein PROVALCAL_00860 [Providencia alcalifaciens DSM
30120]
Length = 2918
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 21/135 (15%)
Query: 233 LTLIGGVKNYIDLNTESWS---SIGGYEKNMTIA----------QHTVIESVVGSSGNDV 279
+ + I L T S I G + TI +++ ++GN+V
Sbjct: 2471 VISSSDRDDQILLPTGYISEKHVIDGQNGDDTIINKSLTSYVLLGGEGDDNIKATAGNNV 2530
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G + NN G+D+ G DT Y I + + D L
Sbjct: 2531 LYGGTGNNFISGGEGDDLLLSGEGNDTLMGEGGDDHYIIDGNHSGAAYIE------DNLG 2584
Query: 340 D--VERLRFADQCID 352
+ + + F Q I+
Sbjct: 2585 NNHIHLVNFKQQAIE 2599
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I GDD + + +Y+ L E +I N + T + G G+D+++
Sbjct: 2494 IDGQNGDDTIINKSLT---SYVLLGGEGDDNIKATAGNNVLYGGTGNNFISGGEGDDLLL 2550
Query: 282 GNSANNVFFESSGND--VFDGS 301
N+ G+D + DG+
Sbjct: 2551 SGEGNDTLMGEGGDDHYIIDGN 2572
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 48/402 (11%), Positives = 113/402 (28%), Gaps = 67/402 (16%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ T +G + + L + +S++ N+ + ++ + S N V+ + ++
Sbjct: 2432 TIHFTNVGDNLSEVILIQDKYSNVF----NVDLQKNHI------SPVNPVISSSDRDDQI 2481
Query: 290 FESSGN----DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+G V DG +G DT Y + E ++
Sbjct: 2482 LLPTGYISEKHVIDGQNGDDTII-NKSLTSYVLLGGEGDD-----------------NIK 2523
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ + + L+ G D + + +G Y+
Sbjct: 2524 ATAGNNVLYGGTGNNFISGGEGDDLLLSGEGNDTLMGEGG-DDHYIIDGNH---SGAAYI 2579
Query: 406 GSYDDLRNVFGSDRGA-----AARHYITHGVKEG------RNPDAFKALEYIASHEDLIN 454
++ + Y + G ++ A I + L +
Sbjct: 2580 EDNLGNNHIHLVNFKQQAIEEVEPDYQVYVSSSGKILKIKQSTQDSGARFNIHHYNQLDS 2639
Query: 455 AFADAPDLVQVGKDHFSNF----GCEEGRFVTFDSYLYLGS-----YDDLRNVFGSD--- 502
+ + ++ + G+ + L L+ G+D
Sbjct: 2640 NSISSTTVSMTSLSYYLSEKLDKAKHSGQLAIWKPVNELADMLNGVPKPLKQTLGNDGIV 2699
Query: 503 --RGAAARHYI---THGVKEGRNPDAF-KALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
A H++ G E + + ++ + ++ LI + G D
Sbjct: 2700 LSENDAREHWLIDMLAGNDEVMDMSQHGRVIKGGSGNDKLITTGGENILYGGQGDDILLA 2759
Query: 557 FGYEEGRSITFNPDLYLTSY--DDLWNVFGSDRSAAAQHYIT 596
G + I+ + +L DD++ V G + H +
Sbjct: 2760 QGMRQDVLISLDGKDHLAGDKGDDIYIVSGHGQGDVTIHDLE 2801
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 3/114 (2%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK-NYIDLNTESWSSIG-GYEKNMT 261
+N + + ++ + + GG D L + L+ Y++L + G ++
Sbjct: 2021 DNNLSGLMSRNNTMPTKYLDGQGGKDTLIIDLLPDAHHAYVNLEKNTLHYKQEGNHPFIS 2080
Query: 262 IAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+A IE+++ + ND + G+ +NV G D+ G G D
Sbjct: 2081 VAHLQNIENIIIRGNTNDSLRGDDKDNVLDGGLGKDLLVGYGGDDKLILTQGDA 2134
Score = 39.4 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 45/174 (25%), Gaps = 31/174 (17%)
Query: 251 SSIGGYEKNMTIAQHTVIESVV----------GSSGNDVVIGNSANNVFFES-SGNDV-- 297
+S N I ++ G +D+ +N S N+
Sbjct: 1978 TSWNTANGNDVIIGAKARKNAFQVLSGEKYFAGGDKDDLFYLQ--DNNLSGLMSRNNTMP 2035
Query: 298 ---FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF-----LSDVERLRFADQ 349
DG G DT + Y ++ E F L ++E +
Sbjct: 2036 TKYLDGQGGKDTLIIDLLPDAHHAYVNLEKNTLHYKQEGNHPFISVAHLQNIENIIIRGN 2095
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
L L +G+D+ + L++G + D
Sbjct: 2096 T--------NDSLRGDDKDNVLDGGLGKDLLVGYGGDDKLILTQGDAVGGDGND 2141
>gi|187607872|ref|NP_001120324.1| hypothetical protein LOC100145387 [Xenopus (Silurana) tropicalis]
gi|166797027|gb|AAI59193.1| Mmp13 protein [Danio rerio]
gi|170284421|gb|AAI60951.1| LOC100145387 protein [Xenopus (Silurana) tropicalis]
Length = 476
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 56/202 (27%), Gaps = 50/202 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
D W + + Y+ + T ++ + AL WS V L F S +D
Sbjct: 110 DYKWKKHQLTYRIENYTLDMSVAEVD-------DSISRALKVWSDVTPLRFTRIYSGTAD 162
Query: 79 IKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
I + + P + +FD + + Y + L
Sbjct: 163 IMIFFATGDHGDGYPFDGPNGFLAHAYPPYEGVG--GDAHFDDDETFSYRSTQYYTLFSV 220
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A HE GH+LGL H V D +
Sbjct: 221 AAHEFGHSLGLGHSRDPGALMYPTYVYRDMDRFILP------------------------ 256
Query: 184 MVSDIVAVQKIYGAPKGSLGNN 205
D+ +Q +YG ++
Sbjct: 257 -RDDVNGIQSLYGPNTDVNTDD 277
>gi|793763|dbj|BAA05519.1| membrane-type matrix metalloproteinase [Homo sapiens]
Length = 582
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATYEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 167 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|327242231|gb|AEA40854.1| matrix metalloproteinase-7 [Canis lupus familiaris]
Length = 230
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 56/190 (29%), Gaps = 46/190 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKF 81
W++ I Y+ T F + +L AL WSK + L+F +DI
Sbjct: 71 WTSEVITYRIASYTPDLPRFRVNQL-------VAKALAMWSKEIPLSFRRVPRGTADIMI 123
Query: 82 ISSNNGYV-CTPRYDSRYF------------MEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + P + +FD+ + W G G A HE+
Sbjct: 124 GFARGAHGDYYPFDGPGNILAHAFAPGPDLGGDAHFDEDERWTDGSRIGINFLIAATHEL 183
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + D DI
Sbjct: 184 GHSLGLGHSSDPDAVMYPTYSIRDS-------------------------KSFKLSQDDI 218
Query: 189 VAVQKIYGAP 198
+QK+YG
Sbjct: 219 EGIQKLYGGN 228
>gi|296534099|ref|ZP_06896605.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296265573|gb|EFH11692.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 1373
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 58/374 (15%), Positives = 98/374 (26%), Gaps = 48/374 (12%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
T AD+ G G A H G G + GV
Sbjct: 195 DTLSGGDGNDTLEGGAGADLLLGGAGADLFRYTEAAHLAGDRFG---DFDDLDRIDLSGV 251
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
++ ++D A G + + +
Sbjct: 252 AGLRFLGDADFTLT--PGELRQSGKWLLLDLDGDGLADYSAWVSGTGMLRETAAGTLVLR 309
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ GD D L G N L + G + N T+ + +
Sbjct: 310 RAAPLLVLGTEAADRLVGDASAD-RLEGNGGNDTLLGMGGDDRLIGGDGNDTLDGGSGND 368
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN--AIIV 327
+ G +G+D + G ++V GNDV G +G D + +++ R + I+
Sbjct: 369 FLEGGNGDDTLTGGDGDDVLSGGHGNDVLLGGAGNDVLRGGPGNDIFRYLRAADLQGDIL 428
Query: 328 YDANEHKQDFLSDVERLRF--------------ADQCIDSVNVKQRSILEYTASYED--- 370
D LS + RF D + ++ E TA+ +
Sbjct: 429 RDLEPGDLLSLSAIGAFRFIGDDPFSGAGMEIRFDGRVLGIDQDGDGRAEITAAIDTGGR 488
Query: 371 -------------------LIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGS 407
L +G DV +G D + L G+
Sbjct: 489 LLEGNVPGSLTLVVARDRALAGTLGDDVITGGPGHDTLTGRDGNDTLLGGSGNDTLLGGN 548
Query: 408 YDDLRNVFGSDRGA 421
+DL + D
Sbjct: 549 GNDLLDGGNGDDVL 562
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 63/489 (12%), Positives = 109/489 (22%), Gaps = 55/489 (11%)
Query: 65 VVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNA 124
V ++F +D+ I + T + + D G G +
Sbjct: 664 VASVSF----SGNDLANILVGSEGDDTLSGLGGNDTLVGWAGHDTLIGGPGNDVLRGETG 719
Query: 125 LHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+ G G + G + + F
Sbjct: 720 DDTLLGGEGDDVLLPGLGRDVMTGGPGA----DWFRYRSVAEIGLLEDRITDFDLADRLD 775
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK-NYI 243
+S I + G G +D+ + D GD D L
Sbjct: 776 LSAIGELSFSPAGLTGRAGQIAVLDGWGGRDAGWTFLAIDLDGDARPDALLTLEGDMALE 835
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ N S I ++ + + + G G D ++G ++ G D G +G
Sbjct: 836 EFNPG--SRILRRVADLNLTGGPGNDVLTGGGGQDRLVGGGGDDRLSGLGGPDQLYGGTG 893
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
DT E D L + R L
Sbjct: 894 NDT-------------LDGGDGDDLLLGEAGDDTL---------------IGGAGRDTLR 925
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ L +G D F ++ D + D + R +
Sbjct: 926 GGDGNDLLAGGLGADTLTGGAGNDIFRYLAAAELEGDRITDFQAGDLIDLAALRARYIGS 985
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ G + R+ + ++ D D + G T
Sbjct: 986 DPFQADGTAQLRSWQLGVTWLAVDANGD-------------GVVDAVMSLGDAAPLEETA 1032
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
L DL G+ G L A ++ L
Sbjct: 1033 PGSGLLRRVADLVLSGGAGNDTLT---GGAGQDTLLGLGGNDTLSGGAGNDSLDGGAGQD 1089
Query: 544 PDLVQAGKD 552
G D
Sbjct: 1090 WLRGGPGSD 1098
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 68/472 (14%), Positives = 113/472 (23%), Gaps = 61/472 (12%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
T + + D G G+ T+ + + LG G
Sbjct: 889 YGGTGNDTLDGGDGDDLLLGEAGDDTLIGGAGRDTLRGGDGNDLLAGGLGADTLTGGAGN 948
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK-----IYGAP 198
+ +T + + + + A + ++ + A
Sbjct: 949 DIFRYLAAAELEGDRITDFQAGDLIDLAALRARYIGSDPFQADGTAQLRSWQLGVTWLAV 1008
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-DLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + + +P +T SG + DL L GG N ++ G
Sbjct: 1009 DANGDGVVDAVMSLGDAAPLEETAPGSGLLRRVADLVLSGGAGNDTLTGGAGQDTLLGLG 1068
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD------GSSGLDTFFYYA 311
N T++ +S+ G +G D + G ++ GNDVF + LDT +
Sbjct: 1069 GNDTLSGGAGNDSLDGGAGQDWLRGGPGSDTLIGGPGNDVFRWEVEDIAGAALDTVLDFT 1128
Query: 312 PSYLYKIYRFEN-------------------------------------------AIIVY 328
+
Sbjct: 1129 VGDTLDFSPLGARFLGSGAFTGRGEAEIRQAGVMLLVDLNGDGFTDASVQLNALPGSLQE 1188
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
A L+ + L + + + L G D+
Sbjct: 1189 TAPGSGLLVLASPQVLTGTEGRDLLTGGGNADTIHGLGGDDVLAGGGGNDILHGGAGNDT 1248
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
EG DI D L G+DR A + F A Y A
Sbjct: 1249 LLGGEGDDILVGGPG----ADSLTGGPGNDRFVFAHGDTGNDSAARDTITDFNAAPY-AD 1303
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFG-CEEGRFVTFDSYLYLGSYDDLRNVF 499
DL AD + G+ V D LY D F
Sbjct: 1304 QLDLSGIDADLTQPGDQAFTLLLSGSLSAPGQLVFLDGVLYGNVDADPAADF 1355
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/271 (13%), Positives = 73/271 (26%), Gaps = 6/271 (2%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH-- 136
+ S T + + D G G ++ + G
Sbjct: 1042 ADLVLSGGAGNDTLTGGAGQDTLLGLGGNDTLSGGAGNDSLDGGAGQDWLRGGPGSDTLI 1101
Query: 137 --PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT-PMVSDIVAVQK 193
PG+ + V + + +V T ++I
Sbjct: 1102 GGPGNDVFRWEVEDIAGAALDTVLDFTVGDTLDFSPLGARFLGSGAFTGRGEAEIRQAGV 1161
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW-SS 252
+ G +++ +T SG L ++ G + L +
Sbjct: 1162 MLLVDLNGDGFTDASVQLNALPGSLQETAPGSGLLVLASPQVLTGTEGRDLLTGGGNADT 1221
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G + +A + + G +GND ++G +++ G D G G D F +
Sbjct: 1222 IHGLGGDDVLAGGGGNDILHGGAGNDTLLGGEGDDILVGGPGADSLTGGPGNDRFVFAHG 1281
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ A Q LS ++
Sbjct: 1282 DTGNDSAARDTITDFNAAPYADQLDLSGIDA 1312
Score = 57.1 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/478 (11%), Positives = 102/478 (21%), Gaps = 54/478 (11%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
+ + D G +L + G G +
Sbjct: 156 AAPVLASGGAGADRLVGGAGDDRLLGLGGNDVLLGGEGDDTLSGGDGNDTLEGGAGADLL 215
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
G + ++ D + ++ + A +
Sbjct: 216 LGGAGADLFRYTEAAHLAGDRFGDFDDLDRIDLSG------VAGLRFLGDADFTLTPGEL 269
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + D L + L + + G E +
Sbjct: 270 RQSGKWLLLDLDGDGLADYSAWVSGTGMLRETAAGTLVLRRAAPLLVLGTEAADRLVGDA 329
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G+ GND ++G ++ GND DG SG D
Sbjct: 330 SADRLEGNGGNDTLLGMGGDDRLIGGDGNDTLDGGSGND--------------------- 368
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
L + +L + L+ G DV
Sbjct: 369 ----------------FLEGGNGDDTLTGGDGDDVLSGGHGNDVLLGGAGNDVLRGGPGN 412
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLR-NVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
F D+ D L D L + G+ R + G++ + +
Sbjct: 413 DIFRYLRAADLQGDILRDLEPGDLLSLSAIGAFRFIGDDPFSGAGMEIRFDGRVLGIDQD 472
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
++ A L++ R + G+ D G
Sbjct: 473 GDGRAEITAAIDTGGRLLEGNVPGSLTLVVARDRAL-------AGTLGDDVITGGPGHDT 525
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G L ++ L D G D F GR
Sbjct: 526 LT---GRDGNDTLLGGSGNDTLLGGNGNDLLDGGNGDDVLEGGLGWDIFRISPETGGR 580
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/365 (13%), Positives = 86/365 (23%), Gaps = 51/365 (13%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + T I G N T++ + + G G+DV+ G + +GND
Sbjct: 6 GNGGANLLTGTPGDDIIQGLGGNDTLSGGDGADILSGGDGDDVLTGGRGADTLHGGAGND 65
Query: 297 VFDGS-------------SGLDTFFYYAPSYL--YKIYRFENAIIVYDANEHKQDFLSDV 341
VF S D + A + L F A + L +
Sbjct: 66 VFRYGSLAELSEDRIVDFSTGDRLDFSAIAGLRFIGAQNFTGAGMEARLAWQGATTLLLI 125
Query: 342 ERLRFA---------------------------------DQCIDSVNVKQRSILEYTASY 368
+ F+ V L
Sbjct: 126 DINGFSRAELTLRLDGALRLVEVAPGQLMLAAPVLASGGAGADRLVGGAGDDRLLGLGGN 185
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITF-DSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ L+ G D G D+ + L Y + ++ G G
Sbjct: 186 DVLLGGEGDDTLSGGDGNDTLEGGAGADLLLGGAGADLFRYTEAAHLAGDRFGDFDDLDR 245
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
A + E + DL G +S + G +
Sbjct: 246 IDLSGVAGLRFLGDADFTLTPGELRQSGKWLLLDLDGDGLADYSAWVSGTGMLRETAAGT 305
Query: 488 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 547
+ V G++ + EG L + + LI +
Sbjct: 306 LVLRRAAPLLVLGTEAADRLVGDASADRLEGN--GGNDTLLGMGGDDRLIGGDGNDTLDG 363
Query: 548 QAGKD 552
+G D
Sbjct: 364 GSGND 368
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 53/379 (13%), Positives = 97/379 (25%), Gaps = 60/379 (15%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
D G G T+ + + G G + G +
Sbjct: 354 GGDGNDTLDGGSGNDFLEGGNGDDTLTGGDGDDVLSGGHGNDVLLGGAGNDVLRGGPGND 413
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ + + +D A I + + I+
Sbjct: 414 IFRYLRAADLQGDILRDLEPGDLLSLSAIGAFRFIGDDPFSGAGMEIRFDGRVLGIDQDG 473
Query: 214 KDSPFIQTIYDSGG----DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
I D+GG ++ + ++ T I G + T+ +
Sbjct: 474 DGRAEITAAIDTGGRLLEGNVPGSLTLVVARDRALAGTLGDDVITGGPGHDTLTGRDGND 533
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF-------- 321
+++G SGND ++G + N++ +G+DV +G G D F +
Sbjct: 534 TLLGGSGNDTLLGGNGNDLLDGGNGDDVLEGGLGWDIFRISPETGGRYTTDTLRDFTQAD 593
Query: 322 -------------------------------ENAIIVYDANEHKQD----FLSDVERLRF 346
+ I DA+ FL V ++
Sbjct: 594 RIDLTQFRGLVWINDGLFSGVRPEARLLRGPGGSRIEIDADGDGVADQGVFLPGVTTVKE 653
Query: 347 AD---------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
D + +IL + + L + G D G D+
Sbjct: 654 TDPGSLLLRIVASVSFSGNDLANILVGSEGDDTLSGLGGNDTLVGWAGHDTLIGGPGNDV 713
Query: 398 ----TFDSYLYLGSYDDLR 412
T D L G DD+
Sbjct: 714 LRGETGDDTLLGGEGDDVL 732
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/448 (11%), Positives = 105/448 (23%), Gaps = 56/448 (12%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
NG + D G G + + + G G
Sbjct: 6 GNGGANLLTGTPGDDIIQGLGGNDTLSGGDGADILSGGDGDDVLTGGRGADTLHGGAGND 65
Query: 145 PV-YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
YG + D + + ++ F + + A GA L
Sbjct: 66 VFRYGSLAELSEDRIVDFSTGDRLDFSAIAGLRFIGAQNFTGAGMEARLAWQGATTLLLI 125
Query: 204 N----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + ++ ++ + + + + GG + + G N
Sbjct: 126 DINGFSRAELTLRLDGALRLVEVAPGQLMLAAPVLASGGAGADRLVGGAGDDRLLGLGGN 185
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL----DTFFYYAPSYL 315
+ +++ G GND + G + ++ +G D+F + D F +
Sbjct: 186 DVLLGGEGDDTLSGGDGNDTLEGGAGADLLLGGAGADLFRYTEAAHLAGDRFGDFDDLDR 245
Query: 316 YKIYRFEN------------------------------AIIVYDANEHKQDFLSDVE--- 342
+ + Y A L +
Sbjct: 246 IDLSGVAGLRFLGDADFTLTPGELRQSGKWLLLDLDGDGLADYSAWVSGTGMLRETAAGT 305
Query: 343 ---------RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+ + V LE + L+ + G D
Sbjct: 306 LVLRRAAPLLVLGTEAADRLVGDASADRLEGNGGNDTLLGMGGDDRLIGGDGNDTLDGGS 365
Query: 394 GRDI----TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G D D L G DD+ + + ++ G D F+ L
Sbjct: 366 GNDFLEGGNGDDTLTGGDGDDVLSGGHGNDVL-LGGAGNDVLRGGPGNDIFRYLRAADLQ 424
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEE 477
D++ L F G +
Sbjct: 425 GDILRDLEPGDLLSLSAIGAFRFIGDDP 452
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 33/270 (12%), Positives = 68/270 (25%), Gaps = 21/270 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ P + GG D L + + G + T +
Sbjct: 849 DLNLTGGPGNDVLTGGGGQDRL-------------VGGGGDDRLSGLGGPDQLYGGTGND 895
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV-- 327
++ G G+D+++G + ++ +G D G G D + I
Sbjct: 896 TLDGGDGDDLLLGEAGDDTLIGGAGRDTLRGGDGND--LLAGGLGADTLTGGAGNDIFRY 953
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES---MK 384
A E + D ++D + D + + + +G
Sbjct: 954 LAAAELEGDRITDFQAGDLIDLAALRARYIGSDPFQADGTAQLRSWQLGVTWLAVDANGD 1013
Query: 385 HFYEFGLSEGR-DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ +S G ++ G + ++ S G L
Sbjct: 1014 GVVDAVMSLGDAAPLEETAPGSGLLRRVADLVLSGGAGNDTLTGGAGQDTLLGLGGNDTL 1073
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNF 473
A ++ L G D
Sbjct: 1074 SGGAGNDSLDGGAGQDWLRGGPGSDTLIGG 1103
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 63/434 (14%), Positives = 106/434 (24%), Gaps = 59/434 (13%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIG-----GVKNYIDLNTESWSSIGGYEKNMTI 262
+ + +Y G+D LD + + ++ G + N +
Sbjct: 874 GGDDRLSGLGGPDQLYGGTGNDTLDGGDGDDLLLGEAGDDTLIGGAGRDTLRGGDGNDLL 933
Query: 263 AQHTVIESVVGSSGNDVVIGNSAN----NVFFESSGNDVFDGSS------GLDTFFYYAP 312
A +++ G +GND+ +A + + D+ D ++ G D F
Sbjct: 934 AGGLGADTLTGGAGNDIFRYLAAAELEGDRITDFQAGDLIDLAALRARYIGSDPFQADGT 993
Query: 313 SYLYKIYRF-------ENAIIVYDA------------NEHKQDFLSDVERLRFADQCIDS 353
+ L N V DA L V L + +
Sbjct: 994 AQLRSWQLGVTWLAVDANGDGVVDAVMSLGDAAPLEETAPGSGLLRRVADLVLSGGAGND 1053
Query: 354 V-----------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-FDS 401
+ L A + L GQD G D+ ++
Sbjct: 1054 TLTGGAGQDTLLGLGGNDTLSGGAGNDSLDGGAGQDWLRGGPGSDTLIGGPGNDVFRWEV 1113
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
G+ D F + G +A A L++ D
Sbjct: 1114 EDIAGAALDTVLDFTVGDTLDFSPLGARFLGSGAFTGRGEAEIRQAGVMLLVDLNGDGFT 1173
Query: 462 LVQVGKDHFSNFGCEEGRFVTF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
V + E L DL G+ + G
Sbjct: 1174 DASVQLNALPGSLQETAPGSGLLVLASPQVLTGTEGRDLLTGGGNADTI----HGLGGDD 1229
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSY 576
L A ++ L+ D + G D S G F T
Sbjct: 1230 VLAGGGGNDILHGGAGNDTLLGGEGDDILVGGPGAD--SLTGGPGNDRFVF--AHGDTGN 1285
Query: 577 DDLWNVFGSDRSAA 590
D +D +AA
Sbjct: 1286 DSAARDTITDFNAA 1299
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 68/534 (12%), Positives = 121/534 (22%), Gaps = 83/534 (15%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + + DV R G G A G L
Sbjct: 371 EGGNGDDTLTGGDGDDVLSGGHGNDVLLGGAGNDVLRGGPGNDIFRYLRAADLQGDIL-- 428
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + M ++I A
Sbjct: 429 ---RDLEPGDLLSLSAIGAFRFIGDDPFSGAGMEIRFDGRVLGIDQDGDGRAEITAAIDT 485
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + + + P T+ D L G + + + ++
Sbjct: 486 GGR-------------LLEGNVPGSLTLV-----VARDRALAGTLGDDVITGGPGHDTLT 527
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD------GSSGLDTFF 308
G + N T+ + ++++G +GND++ G + ++V G D+F G DT
Sbjct: 528 GRDGNDTLLGGSGNDTLLGGNGNDLLDGGNGDDVLEGGLGWDIFRISPETGGRYTTDTLR 587
Query: 309 YYAPSYLYKIYRFEN--------------------------------------------A 324
+ + + +F
Sbjct: 588 DFTQADRIDLTQFRGLVWINDGLFSGVRPEARLLRGPGGSRIEIDADGDGVADQGVFLPG 647
Query: 325 IIVYDANEHKQDFLSDVERLRFA--DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + L V + F+ D V + L + L+ G D
Sbjct: 648 VTTVKETDPGSLLLRIVASVSFSGNDLANILVGSEGDDTLSGLGGNDTLVGWAGHDTLIG 707
Query: 383 MKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
G D D L G D+ R G+ E R D
Sbjct: 708 GPGNDVLRGETGDDTLLGGEGDDVLLPGLGRDVMTGGPGADWFRYRSVAEIGLLEDRITD 767
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
A S ++ +G GR + D +
Sbjct: 768 FDLADRLDLSAIGELSFSPAGLTGRAGQIAVLDGWG---GRDAGWTFLAIDLDGDARPDA 824
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+ G A G + R L ++ L + G D
Sbjct: 825 LLTLEGDMALEEFNPGSRILRRVADLN-LTGGPGNDVLTGGGGQDRLVGGGGDD 877
Score = 42.9 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 24/231 (10%), Positives = 55/231 (23%), Gaps = 12/231 (5%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
I + + G+ G+D++ G N+ G D+ G G D ++
Sbjct: 4 IIGNGGANLLTGTPGDDIIQGLGGNDTLSGGDGADILSGGDGDD--VLTGGRGADTLHGG 61
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + + LS+ + F+ + + G +
Sbjct: 62 AGNDVFRYGSLAE---LSEDRIVDFSTGDRLDFSAIAGLRFIGAQN----FTGAGMEARL 114
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR---GAAARHYITHGVKEGRNPD 438
+ + L + + + A G
Sbjct: 115 AWQGATTLLLIDINGFSRAELTLRLDGALRLVEVAPGQLMLAAPVLASGGAGADRLVGGA 174
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
L + ++ L+ D G D + + L+
Sbjct: 175 GDDRLLGLGGNDVLLGGEGDDTLSGGDGNDTLEGGAGADLLLGGAGADLFR 225
>gi|190339264|gb|AAI62135.1| Matrix metalloproteinase 14 (membrane-inserted) beta [Danio rerio]
Length = 621
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 40/146 (27%), Gaps = 31/146 (21%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS--- 74
++ W I + T ++ E R A W V L F E S
Sbjct: 107 IQGLKWDKNEITFCIQNYTPKVGEYETFE-------AIRKAFKVWESVTPLRFREISYSD 159
Query: 75 ------IHSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYG 113
+DI ++ + P + +
Sbjct: 160 IRDKVVDFADIMLFFADGFHGDASPFDGEGGFLAHAYFPGNGIGGDTHFDAAEPWTIGNK 219
Query: 114 IGKGTILSHNALHEIGHALGLMHPGS 139
G + A+HE+GHALG+ H
Sbjct: 220 DLLGNDVFLVAVHELGHALGMEHSND 245
>gi|1495995|emb|CAA62432.1| MT-MMP protein [Homo sapiens]
Length = 582
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATYEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 167 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|281343370|gb|EFB18954.1| hypothetical protein PANDA_015650 [Ailuropoda melanoleuca]
Length = 554
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 85 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 137
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 138 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 197
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 198 DVNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 239
>gi|159026906|emb|CAO89157.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 397
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 60/207 (28%), Gaps = 36/207 (17%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIA 263
T++ G+D L+ + G + L S+ G N ++
Sbjct: 145 FNDTLTGGSVADTLFGGNGNDSLNGSGGTDTLHGDDGDDTLLGGSGSDSLDGDAGNDSLD 204
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+V +++ G +GND ++G S N+ SG D DG DT F
Sbjct: 205 GGSVNDTLFGRTGNDTLLGGSGNDSLDGGSGTDSLDGGEDNDTLF--------------- 249
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
+ E + L+ + + LI G D
Sbjct: 250 ------GGSDNDTLFGNSE-------DDSLLGGDGNDSLDGGSENDTLIGGDGNDTLTGG 296
Query: 384 KHFYEF---GLSEGRDITFDSYLYLGS 407
+F +EG D D
Sbjct: 297 SGADQFVYNNSNEGADTITDFGFGGAD 323
Score = 54.4 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 54/222 (24%), Gaps = 10/222 (4%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++VGS+ ND + G S + F +GND +GS G DT + + + +
Sbjct: 139 NIVGSNFNDTLTGGSVADTLFGGNGNDSLNGSGGTDTL--HGDDGDDTLLGGSGSDSLDG 196
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ V F L + + L G D + +
Sbjct: 197 DAGNDSLDGGSVNDTLF--------GRTGNDTLLGGSGNDSLDGGSGTDSLDGGEDNDTL 248
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
D F + N G Y S+
Sbjct: 249 FGGSDNDTLFGNSEDDSLLGGDGNDSLDGGSENDTLIGGDGNDTLTGGSGADQFVYNNSN 308
Query: 450 EDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
E S FG T L+ +
Sbjct: 309 EGADTITDFGFGGADAIVLSSSGFGGLTTIGGTLTPSLFSAT 350
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/231 (14%), Positives = 66/231 (28%), Gaps = 10/231 (4%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
G + P + SY + + D G + + G
Sbjct: 110 SGDTDNTIPKATNPLTPNGIRNFVTTDSYNIVGSNFNDTLTGGSVADTLFGGNGNDSLNG 169
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ + + ++ G+D LD GG N ++ G
Sbjct: 170 SGGTDTLHGDDG-DDTLLGGSGSDSLDGDAGNDSLD----GGSVNDTLFGRTGNDTLLGG 224
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N ++ + +S+ G ND + G S N+ F +S +D G G D+ S
Sbjct: 225 SGNDSLDGGSGTDSLDGGEDNDTLFGGSDNDTLFGNSEDDSLLGGDGNDSL--DGGSEND 282
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + + + Q ++ I + ++S
Sbjct: 283 TLIGGDGNDTLTGGSGADQFVYNNSNE---GADTITDFGFGGADAIVLSSS 330
Score = 40.2 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 27/263 (10%), Positives = 54/263 (20%), Gaps = 43/263 (16%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T+ + Y++ + I N + + D + V L
Sbjct: 97 TYVRGGAAGTYQLSGDTDNTIPKATNPL---TPNGIRNFVTTD-SYNIVGSNFNDTLTGG 152
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ + L G D +G D D N
Sbjct: 153 SVADTLFGGNGNDSLNGSGGTDTLHGDDGDDTLLGGSGSDSLDGDAGNDSLDGGSVNDTL 212
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ G +L+ + + L + D ++
Sbjct: 213 FGRTGNDTLLGGSGNDSLDGGSGTDSLDGGEDNDTLFGGSDNDTLFGNSEDDSLLGG--- 269
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
D +L+ + ++ LI +
Sbjct: 270 ------------------------------------DGNDSLDGGSENDTLIGGDGNDTL 293
Query: 546 LVQAGKDHFSNFGYEEGRSITFN 568
+G D F EG +
Sbjct: 294 TGGSGADQFVYNNSNEGADTITD 316
>gi|26352221|dbj|BAC39747.1| unnamed protein product [Mus musculus]
Length = 474
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 59/197 (29%), Gaps = 46/197 (23%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
+LL + +V +T L P + A WS V LTF E
Sbjct: 45 KYLLLGHWRKKNLTFRIFNVPSTLSL--------PRVRAALHQAFKYWSSVAPLTFREVK 96
Query: 75 IH-SDIKFISSNNGYVCTPRYDSRYF-----------MEINFDKADVWRYGIGKGTILSH 122
+DI+ + I+FDK ++W G +G L
Sbjct: 97 AGWADIRLSFHGRQSLYCSNTFDGPGKVLAHADIPELGSIHFDKDELWTEGTYQGVNLRI 156
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE+GHALGL H Y + + A +
Sbjct: 157 IAAHEVGHALGLGH--------------------------SRYTQALMAPVYAGYQPFFK 190
Query: 183 PMVSDIVAVQKIYGAPK 199
D+ +Q +YG
Sbjct: 191 LHPDDVAGIQALYGKRS 207
>gi|241204477|ref|YP_002975573.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858367|gb|ACS56034.1| Hemolysin-type calcium-binding region [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 759
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 57/203 (28%), Gaps = 15/203 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + G K + G+D +++N + ++ GG
Sbjct: 454 GGNETFKG---LGGSDVLKGGAGADVLDGGTGNDTASYAGSIA----VNVNLATKAASGG 506
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
IA IE++ GSS NDV+ G N +NV +G D G +G D
Sbjct: 507 QATGDKIAG---IENLTGSSYNDVLTGGNGGSNVLNGGAGADKLSGGAGGDVINGGTGQD 563
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + + + + +L + L
Sbjct: 564 TAGYAGSGGVNVNLATGAASGGHATGDKFVSIE----NLTGSSYNDVLTGNSGSNVLDGG 619
Query: 375 IGQDVFESMKHFYEFGLSEGRDI 397
G D G+DI
Sbjct: 620 AGADKLNGGAGTDVIIGGAGKDI 642
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 68/244 (27%), Gaps = 9/244 (3%)
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
+G + L + G D S +V ++
Sbjct: 462 LGGSDVLKGGAGADVLDGGTGNDTASYAGSIAVNVNLATKAASGGQATGDKIAGIENLTG 521
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
+ G GS N + I G D GGV ++L T
Sbjct: 522 SSYNDVLTGGNGGSNVLNGGAGADKLSGGAGGDVINGGTGQDTAGYAGSGGVN--VNLAT 579
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ S IE++ GSS NDV+ GNS +NV +G D +G +G D
Sbjct: 580 GAASGGHATGDKF-----VSIENLTGSSYNDVLTGNSGSNVLDGGAGADKLNGGAGTD-- 632
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + +A + S+ + + +D ++
Sbjct: 633 VIIGGAGKDIMTGGVSADTFVFKAPTEIGSGSNRDVITDFQHGVDKMDFSAIDANGSAQG 692
Query: 368 YEDL 371
Sbjct: 693 NGTF 696
>gi|291297796|ref|YP_003509074.1| hypothetical protein Snas_0263 [Stackebrandtia nassauensis DSM
44728]
gi|290567016|gb|ADD39981.1| hypothetical protein Snas_0263 [Stackebrandtia nassauensis DSM
44728]
Length = 742
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 14/155 (9%)
Query: 192 QKIYG--APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
+IYG G+ + I G D + G +
Sbjct: 402 DEIYGHEGNDLISGD---GGQDYVDGQDGNDNISGGGDTDTI----YGLDGDDTITGGSG 454
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G E N ++ T + V G G+D + G+ N+V + G D DG G D
Sbjct: 455 KDYLEGAEGNDSVNGGTGEDVVSGGRGDDTLHGDDGNDVIYAGDGKDSVDGGEGNDKLLV 514
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
+ N V + D + +V+ +
Sbjct: 515 QDGDNVASDKVASNGYSV-----NDTDTVKNVKIV 544
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/289 (11%), Positives = 68/289 (23%), Gaps = 20/289 (6%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
+ K +V T+ D GG + + L + +I
Sbjct: 254 GDDDVTIDPSVKSDVTVLGGEGEDTVVDGGG----PGSDPSTGSRTV-LGGDGKDNIVVN 308
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF-------FESSGNDVFDGSSGLDTFFY 309
N ++ + VV N+ V + G+D + D +
Sbjct: 309 GDNRNVSSGAGDDRVVALGDNNNVSTGDGKDDVRTTGGYSSTGRGDDFVRAGNHDDPLYK 368
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
P + I+ E + + + ++ + + ++ +
Sbjct: 369 DKPVHESTIFGGEGNEEIQGSTKDD--------KISGGSGEDEIYGHEGNDLISGDGGQD 420
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D +G D N +
Sbjct: 421 YVDGQDGNDNISGGGDTDTIYGLDGDDTITGGSGKDYLEGAEGNDSVNGGTGEDVVSGGR 480
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
G D + + + + LVQ G + S+ G
Sbjct: 481 GDDTLHGDDGNDVIYAGDGKDSVDGGEGNDKLLVQDGDNVASDKVASNG 529
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 72/298 (24%), Gaps = 22/298 (7%)
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSG---------NDVFDGSSGLDTFFYYAP-SY 314
TVI + V + NV G N G G D
Sbjct: 207 GTVIVNTGTGDEKTKVHTDRDGNVIVTVDGKEFKYPPGTNIAVRGGEGDDDVTIDPSVKS 266
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ E V D D + + D + V + A + ++ +
Sbjct: 267 DVTVLGGEGEDTVVDGGGPGSDPSTGSRTVLGGDGKDNIVVNGDNRNVSSGAGDDRVVAL 326
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
+ + + + G T ++ + + ++ + + G +E
Sbjct: 327 GDNNNVSTGDGKDDVRTTGGYSSTGRGDDFVRAGNHDDPLYKDKPVHESTIFGGEGNEEI 386
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ + S ED I + G + + D + D
Sbjct: 387 QGSTKDDKISG-GSGEDEIYGHEGNDLISGDGGQDYVD---------GQDGNDNISGGGD 436
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
++G D G + ++ + + D G D
Sbjct: 437 TDTIYGLDGDDTIT--GGSGKDYLEGAEGNDSVNGGTGEDVVSGGRGDDTLHGDDGND 492
>gi|170749424|ref|YP_001755684.1| hypothetical protein Mrad2831_3017 [Methylobacterium radiotolerans
JCM 2831]
gi|170655946|gb|ACB25001.1| hypothetical protein Mrad2831_3017 [Methylobacterium radiotolerans
JCM 2831]
Length = 322
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 59/168 (35%), Gaps = 20/168 (11%)
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYIT-HGVKEGR-NPDAFKALEYIASHEDLINAFA 457
D D LR+V + + + G + G DAF ++ + +
Sbjct: 153 DPAAVEVYSDLLRDVCVRRGVSFFDPFASLRGARFGLAEDDAFIDGTHLRDYAAVAA--- 209
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ +D + E FD Y Y D ARHY+ G +E
Sbjct: 210 ---RITGHIRDRYGLERYLETPLPGFDEEYYRSWYADTCQY----PHGLARHYLDLGWRE 262
Query: 518 GRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
GR+P F Y+ ++ D+ A P + HF G+ +GR+
Sbjct: 263 GRDPSGHFSTDGYLDANPDVRAA-GVNPLV------HFLEVGFAQGRT 303
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 13/85 (15%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDLW 580
F Y + + D L H+ + G+ EGR + F+ D YL + D+
Sbjct: 231 GFDEEYYRSWYAD---TCQYPHGLA----RHYLDLGWREGRDPSGHFSTDGYLDANPDVR 283
Query: 581 NVFGSDRSAAAQHYITHGMKEGRAL 605
H++ G +GR
Sbjct: 284 AA----GVNPLVHFLEVGFAQGRTG 304
Score = 45.5 bits (106), Expect = 0.029, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 384 KHFYEFGLSEGRDIT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
+H+ + G EGRD + F + YL + D+R H++ G +GR
Sbjct: 253 RHYLDLGWREGRDPSGHFSTDGYLDANPDVRAA----GVNPLVHFLEVGFAQGRTG 304
>gi|185134636|ref|NP_001117671.1| matrix metalloproteinase [Oncorhynchus mykiss]
gi|11761266|dbj|BAB19131.1| matrix metalloproteinase [Oncorhynchus mykiss]
Length = 475
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 57/193 (29%), Gaps = 44/193 (22%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELNPNA-----QEVARWALGEWSKVVDLTFEET-SIHSD 78
F + T++L++ I P+ AL W+KV L F +D
Sbjct: 100 GRFTTFDNLKWPTNQLTYRIENYTPDMSVAEVDNSIERALQVWAKVSPLRFTRIYRGTAD 159
Query: 79 IKFISSN-------------NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
I N + + +FD + + + +G L A
Sbjct: 160 IMISFGNRNHGDFYPFDGPEGTLAHAFSPGADIGGDAHFDDDEYFTFSSTRGYNLFLVAA 219
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GH+LGL H + V SY P +
Sbjct: 220 HEFGHSLGLSHSNDPGA---------------LMFPVYSYTEPST----------FSLPR 254
Query: 186 SDIVAVQKIYGAP 198
D+ +Q IYG
Sbjct: 255 DDVTGIQYIYGPN 267
>gi|110331901|gb|ABG67056.1| matrix metalloproteinase 14 preproprotein [Bos taurus]
Length = 536
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 113 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 165
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 166 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 225
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 226 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 267
>gi|60207666|gb|AAX14807.1| matrix metalloproteinase 3/10b [Notophthalmus viridescens]
Length = 469
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 56/191 (29%), Gaps = 51/191 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKF 81
W + + Y+ T D+ + A WS V LTF +DI+
Sbjct: 107 WRTHALTYRILNYTPDMARADVD-------TAIQKAFKVWSDVTPLTFTRIYYGTADIQI 159
Query: 82 IS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ P + +FD+ + W G GT L A H
Sbjct: 160 SFAAREHGDFSPFDGPHGTLAHAFAPSTG--IGGDAHFDEDERWTKGSA-GTNLFLVAAH 216
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E GH+LGL H + SY P A +
Sbjct: 217 EFGHSLGLSHSNDRRA---------------LMFPTYSYTDP------ARYQLPK----D 251
Query: 187 DIVAVQKIYGA 197
DI +Q +YG
Sbjct: 252 DINGIQALYGP 262
>gi|114652041|ref|XP_001157686.1| PREDICTED: matrix metalloproteinase-14 isoform 4 [Pan troglodytes]
Length = 582
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATYEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 167 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|332208030|ref|XP_003253099.1| PREDICTED: stromelysin-1 [Nomascus leucogenys]
Length = 477
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 54/195 (27%), Gaps = 50/195 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 109 WRKTHLTYRIVNYTPDLPK-------DAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMI 161
Query: 73 ---TSIHSDIK-FISSNN--GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
H D F N + P + +FD + W GT L A H
Sbjct: 162 SFAVREHGDFYPFDGPGNVLAHAYAP--GPGINGDAHFDDDEQWTKDT-TGTNLFLVAAH 218
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
EIGH+LGL H S T + Y + F
Sbjct: 219 EIGHSLGLFH--------------------SANTEALMYPLYHSLTDLTRFRLSQ----D 254
Query: 187 DIVAVQKIYGAPKGS 201
DI +Q +YG P S
Sbjct: 255 DINGIQSLYGPPPDS 269
>gi|148690305|gb|EDL22252.1| matrix metallopeptidase 25 [Mus musculus]
Length = 562
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 61/198 (30%), Gaps = 51/198 (25%)
Query: 31 KPDVLTTHRLSFDITELNPNAQ---EVARW----ALGEWSKVVDLTFEETSIHSD----- 78
V L++ I + +Q ++ R AL W+ LTF+E +
Sbjct: 113 SGSVWKKRTLTWSIRSFSQKSQLSPQIVRTLLSYALAVWATESGLTFQEVNSQYQEPDII 172
Query: 79 IKFI-------------SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTIL--SHN 123
I F + P + +FD + W +G +
Sbjct: 173 IHFARAYHQDSYPFDGSGGTLAHAFFPGEHP-ISGDTHFDDEETWTFGSTDDNGIDLFAV 231
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A+HE GHALGL H S S+M F A++
Sbjct: 232 AVHEFGHALGLGHS-------------------SAPNSIMRPFYQGPVGDPATYRLPQ-- 270
Query: 184 MVSDIVAVQKIYGAPKGS 201
D +Q++YG +
Sbjct: 271 --DDRDGLQQLYGRVSQN 286
>gi|71896449|ref|NP_001025502.1| stromelysin-1 [Xenopus (Silurana) tropicalis]
gi|89267895|emb|CAJ83343.1| matrix metalloproteinase 3 (stromelysin 1, progelatinase) [Xenopus
(Silurana) tropicalis]
Length = 497
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 61/188 (32%), Gaps = 44/188 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T +E++ + R WS V L F++ + +DI
Sbjct: 129 WGKTTVTYRILNYTPD---ITKSEVDYAIAQAFRV----WSDVTPLNFQKLNSGDADIMI 181
Query: 82 ISSNNGYVCTPRYDS-------------RYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D + +FD+ + W G G L H A HE
Sbjct: 182 SFNTRAHGDFDSFDGPNGVLAHAYAPSDGIGGDAHFDEDEQWTLGP-TGANLFHVAAHEF 240
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LG+ H N + +S+ + D DI
Sbjct: 241 GHSLGMSHSTDTNA---------------LMYPTVSFGVTIDPAQ-------YKLSADDI 278
Query: 189 VAVQKIYG 196
+Q +YG
Sbjct: 279 AGIQTLYG 286
>gi|163736618|ref|ZP_02144037.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
gi|161390488|gb|EDQ14838.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
BS107]
Length = 414
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/308 (13%), Positives = 81/308 (26%), Gaps = 37/308 (12%)
Query: 202 LGNNIYKIEVQQKDSPFIQTI----YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G +I SP+ TI +SGG + ++ ++ +
Sbjct: 42 TGTSITLTGDFSSSSPYFWTIESMAVNSGGTPVYAISEFSMNFYRFSASSGAALEAAILT 101
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ TI ++ + + ++V G+D G G D +
Sbjct: 102 GDDTITS-----NMAEGTRW---LAYGGDDVISLGIGDDYVHGGYGTDRLIIHDTYGRAD 153
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQC-----------------------IDSV 354
I V+ + +D L +E+L+F+++ +
Sbjct: 154 ISSVYGG--VWIDSADGRDTLLSIEQLQFSNRSFSLSVDTSSSTSMSGDRDSTLTSDIML 211
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
L + + L+ G D + +G DI DL
Sbjct: 212 GGLGADTLAGLSGRDMLLGEEGNDHLMGGEGHDTLKGGDGHDILLGGSGRDWLAGDLGED 271
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
S + G R D L + + L+ + G+D
Sbjct: 272 AISGGSHGDKLIGGGGHDTLRGQDGHDVLRGNSGWDQLLGGRGNDRIYGDGGQDRLIGQE 331
Query: 475 CEEGRFVT 482
+
Sbjct: 332 GNDTLTGG 339
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 12/162 (7%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
K + G D L + + GG + ++ G + + +
Sbjct: 242 GHDTLKGGDGHDILLGGSGRDWLAGDLGEDAISGGSHGDKLIGGGGHDTLRGQDGHDVLR 301
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++ + ++G GND + G+ + GND G + DTF ++ I F
Sbjct: 302 GNSGWDQLLGGRGNDRIYGDGGQDRLIGQEGNDTLTGGAHADTFVFHRGYGTDIITDFTV 361
Query: 324 AI--IVYDANEHKQDFLS-----DVERLRFADQCIDSVNVKQ 358
I D L+ + ++ FAD I N
Sbjct: 362 GEDRIQIGRGADGIDDLTFTSQGNSVQITFADVTIMVENSTL 403
>gi|804994|emb|CAA58519.1| MT-MMP [Homo sapiens]
gi|40675475|gb|AAH64803.1| Matrix metallopeptidase 14 (membrane-inserted) [Homo sapiens]
gi|54781371|gb|AAV40837.1| matrix metalloproteinase 14 (membrane-inserted) [Homo sapiens]
gi|158256086|dbj|BAF84014.1| unnamed protein product [Homo sapiens]
Length = 582
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATYEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 167 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|327269126|ref|XP_003219346.1| PREDICTED: matrilysin-like [Anolis carolinensis]
Length = 423
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 44/130 (33%), Gaps = 25/130 (19%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF- 81
W + Y+ T+ + + A+ WS V L F +T+ +DI
Sbjct: 108 WKKNSLTYRIINTTSDLPQDKVESILA-------EAIKVWSDVTPLKFTKTTDTADIDIY 160
Query: 82 --------------ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ + P + +FD + W +GT L A HE
Sbjct: 161 FARDEHGDNYPFDGVGGTLAHAFAP--GKGLAGDAHFDDDEYWTED-DEGTSLFIVAAHE 217
Query: 128 IGHALGLMHP 137
GH+LGL H
Sbjct: 218 FGHSLGLGHS 227
>gi|327269112|ref|XP_003219339.1| PREDICTED: stromelysin-2-like [Anolis carolinensis]
Length = 470
Score = 63.7 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 60/207 (28%), Gaps = 52/207 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + Y T D+ A WS V LTF +DI+
Sbjct: 108 WEKKDLTYSIQNYTPDMERADVD-------NAIERAWKMWSDVTPLTFTRVYDGSADIEI 160
Query: 82 ISSNNGYVCTP-----------RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
++ + Y Y +FD+ + W G L A HE GH
Sbjct: 161 SFASGNHGDYIPFDGQGGQLAHAYSPAYGGNAHFDEDETWMTS-STGINLFIVAAHEFGH 219
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--SDI 188
+LGL H D+ + FG T + DI
Sbjct: 220 SLGLYHSRE---------------LDALMF------------PTYQFGDPQTLKLHRDDI 252
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKD 215
+Q +YG P+ +N + +
Sbjct: 253 EGIQHLYGPPE---EDNSEPENPTENN 276
>gi|293604651|ref|ZP_06687053.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553]
gi|292816982|gb|EFF76061.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553]
Length = 3744
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 88/297 (29%), Gaps = 26/297 (8%)
Query: 24 SNYFIRYKPDVLTTHRLSFDITELN-----------PNAQEVARWALGEWSKVVDLTFEE 72
++ F + DV T + D+ + + ALG W+ +
Sbjct: 3350 NSGFAKMTFDVRTESFNTGDVFSWSLQVRKADGTWITVDKGNVTSALGSWTTIT----TN 3405
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA- 131
T +F+ + I D G + E A
Sbjct: 3406 TYAGGTYRFVFDVADNTAGNSNAGIWIDNITRVSFDASNVITAPGGDVDIVLKGEDLAAA 3465
Query: 132 -LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G + F ++ + + ++ S + D +A
Sbjct: 3466 LQGGSSSTDPAVVGNDVINGGAGNDIIFGDTINTDHLAWGNVAAGSHDGQGLKALQDFLA 3525
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
Q + A + + ++ + F GG+D + GG + I
Sbjct: 3526 YQNGHAATSAEVYD-----YLKANHAQFNIADDPRGGNDTI----HGGTGDDIIYGQGGD 3576
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
++ G + N + + + G +GND + G S N+ G+D G +G DTF
Sbjct: 3577 DALYGDDGNDILYGGAGNDLLHGGAGNDTLDGGSGNDTLIGGKGDDTLYGGAGSDTF 3633
Score = 45.5 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 17/154 (11%), Positives = 33/154 (21%), Gaps = 28/154 (18%)
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
N+ +G+D+ G G D + +Y ++
Sbjct: 3554 PRGGNDTIHGGTGDDIIYGQGGDDALY--GDDGNDILYGGAGNDLL-------------- 3597
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
L+ + + LI G D F + +
Sbjct: 3598 ------------HGGAGNDTLDGGSGNDTLIGGKGDDTLYGGAGSDTFKWELNDQGSVGA 3645
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
D + + G K+G
Sbjct: 3646 PAVDTIKDFSTATVANGGDVLDLKDLLIGEKDGT 3679
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 22/167 (13%), Positives = 40/167 (23%), Gaps = 11/167 (6%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND--VVIGNSANNVFFES---SGNDVFD 299
L S S+ N I + + G + N + GN A + D
Sbjct: 3466 LQGGSSSTDPAVVGNDVINGGAGNDIIFGDTINTDHLAWGNVAAGSHDGQGLKALQDFLA 3525
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNV 356
+G + + + D D + + + +
Sbjct: 3526 YQNGH---AATSAEVYDYLKANHAQFNIADDPRGGNDTIHGGTGDDIIYGQGGDDALYGD 3582
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
IL A + L G D + +G D +
Sbjct: 3583 DGNDILYGGAGNDLLHGGAGNDTLDGGSGNDTLIGGKGDDTLYGGAG 3629
>gi|325982594|ref|YP_004294996.1| outer membrane adhesin like protein [Nitrosomonas sp. AL212]
gi|325532113|gb|ADZ26834.1| outer membrane adhesin like proteiin [Nitrosomonas sp. AL212]
Length = 1060
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 50/168 (29%), Gaps = 8/168 (4%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ L + G + TI + + G +GND ++G + + +G D
Sbjct: 796 NNVENLILRGALAINGTGNGQANTITGNAANNVLKGGAGNDNLLGGAGMDTLEGGTGRDT 855
Query: 298 FDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-Q 349
DG G D+ Y + I I + VE L
Sbjct: 856 LDGGFGADSLKGGSGNDNYGVDNAGDSIIEAAGGGIDGVNSSVTYAIPDPVENLTLTGTS 915
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
++ Q +I+ L G D+ + + G DI
Sbjct: 916 ALNGTGNSQANIIIGNTGNNQLKAAAGNDILDGRQGTDLLTGGLGNDI 963
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 58/426 (13%), Positives = 103/426 (24%), Gaps = 58/426 (13%)
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG-LDTFFYYAPSYL 315
N +I G+ I ++ V + GND G+S DT Y +
Sbjct: 636 SGNFSINTSVSDGVASPLLGSKNFIADAGV-VLTSTPGNDNLVGTSSLNDTASYENATTS 694
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ D LS +E L + L + L +
Sbjct: 695 VTVSLNIATQQNTLG--AGLDTLSKIENL---------IGSNFADHLTGNTASNILQGRL 743
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDS-------YLYLGSYDDLRNVFGSDRGAAARHYIT 428
G DV G D F + D + + + I
Sbjct: 744 GNDVLTGWSGADTLIGGPGNDSYFVEIAGDVVIEAFNEGIDSVNSSVTYTLPNNVENLIL 803
Query: 429 HGVK--EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS- 485
G G + A++ L + L G D + F +
Sbjct: 804 RGALAINGTGNGQANTITGNAANNVLKGGAGNDNLLGGAGMDTLEGGTGRDTLDGGFGAD 863
Query: 486 --------YLYLGSYDDL----RNVFGSDRGAAARHYITHGVKEGRNPDAFKALE----- 528
Y G D ++ Y E AL
Sbjct: 864 SLKGGSGNDNYGVDNAGDSIIEAAGGGIDGVNSSVTYAIPDPVENLTLTGTSALNGTGNS 923
Query: 529 ------YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNV 582
+ L A + + G D G F L D + +
Sbjct: 924 QANIIIGNTGNNQLKAAAGNDILDGRQGTD--LLTGGLGNDIFRFTT---LGQTDTITDF 978
Query: 583 FGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTD 642
+ + ++ + + ++ +F+ N A+ ++ ++ L D
Sbjct: 979 NVINDTIQLENAVFTALT--ATGTLAAGRFRIGAN-----ALDANDNIIYNSATGALIYD 1031
Query: 643 YFGDGN 648
G+G
Sbjct: 1032 ANGNGA 1037
>gi|47522674|ref|NP_999070.1| matrix metalloproteinase-20 precursor [Sus scrofa]
gi|11386893|sp|P79287|MMP20_PIG RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
Flags: Precursor
gi|1800213|gb|AAB41396.1| matrix metalloproteinase [Sus scrofa]
Length = 483
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 57/199 (28%), Gaps = 55/199 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ T + P + AL WS V L+F + +DI
Sbjct: 117 WKKNTLTYRISKYTP--------SMTPAEVDKAMEMALQAWSSAVPLSFVRVNAGEADIM 168
Query: 81 FISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ P + +FD A+ W G+ G L A
Sbjct: 169 ISFETGDHGDSYPFDGPRGTLAHAFAP--GEGLGGDTHFDNAEKWTMGM-NGFNLFTVAA 225
Query: 126 HEIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE GHALGL H YP Y N Y
Sbjct: 226 HEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKD------------------------ 261
Query: 185 VSDIVAVQKIYGAPKGSLG 203
D+ +Q +YG K G
Sbjct: 262 --DVKGIQALYGPRKTFTG 278
>gi|301610869|ref|XP_002934968.1| PREDICTED: matrix metalloproteinase-18-like [Xenopus (Silurana)
tropicalis]
Length = 466
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/222 (18%), Positives = 63/222 (28%), Gaps = 51/222 (22%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + Y+ T ++ + A WS V LTF +DI
Sbjct: 108 WKKKDLTYRILNYTPDMPKDEVD-------RAIQKAFKVWSDVTPLTFTRILDGVADIDI 160
Query: 82 IS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ P + + +FD+ + W G G L A H
Sbjct: 161 SFAAQVHNDFYPFDGPYGTLAHAFAPGNN--IGGDAHFDEDENWTSG-SVGFNLFLVAAH 217
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E GH+LGL H N D +Y +PQD
Sbjct: 218 EFGHSLGLYHSNDPNALMYPTYHYVD---------TNTYQLPQD---------------- 252
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
DI +Q +YGA + + + I G+
Sbjct: 253 DINGIQSLYGASEKPAEPSTPINPTTCPPNITFDAITTLRGE 294
>gi|291571463|dbj|BAI93735.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 260
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 28/127 (22%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + N TI+ + +++ G G+D + G N++ F + G+D+ +G G DT +
Sbjct: 62 VNGNQGNDTISGGSNNDTLFGGQGDDFLYGGPGNDLLFGNLGDDLLEGGPGNDTIY---- 117
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
D +R D L A L+
Sbjct: 118 ------------------GGQGNDT------IRGNDGDNLLFGDLGNDFLYGGAGRNTLM 153
Query: 373 QVIGQDV 379
G D+
Sbjct: 154 GGEGDDI 160
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 4/102 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
T++ GDD L GG N + + G N TI
Sbjct: 67 GNDTISGGSNNDTLFGGQGDD----FLYGGPGNDLLFGNLGDDLLEGGPGNDTIYGGQGN 122
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+++ G+ G++++ G+ N+ + +G + G G D +F
Sbjct: 123 DTIRGNDGDNLLFGDLGNDFLYGGAGRNTLMGGEGDDIYFLD 164
Score = 44.0 bits (102), Expect = 0.089, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 32/130 (24%), Gaps = 9/130 (6%)
Query: 289 FFESSGNDVFDGSSGLDTFFYYAP---SYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
S G+D+ + G F + + + D +S
Sbjct: 19 LLGSPGDDIIFATPGQALAFPDGILLLAGNDSLQASHITDPLLVNGNQGNDTISG----- 73
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ L + L +G D+ E +G D +
Sbjct: 74 -GSNNDTLFGGQGDDFLYGGPGNDLLFGNLGDDLLEGGPGNDTIYGGQGNDTIRGNDGDN 132
Query: 406 GSYDDLRNVF 415
+ DL N F
Sbjct: 133 LLFGDLGNDF 142
>gi|159044444|ref|YP_001533238.1| hypothetical protein Dshi_1895 [Dinoroseobacter shibae DFL 12]
gi|157912204|gb|ABV93637.1| hypothetical protein Dshi_1895 [Dinoroseobacter shibae DFL 12]
Length = 850
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/358 (12%), Positives = 78/358 (21%), Gaps = 31/358 (8%)
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G ++ + D D I +
Sbjct: 436 TDTETGEITLELVSDAPKANSNDGAVDPRTMDPFTAKDRSATV-LIRSPEVVAAPDDSTS 494
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ I ++V G G D++IG + + ND G +G + + +
Sbjct: 495 YDDKIHSGADADTVHGGLGEDLIIGAGRGDTLSGGADNDAIYGGAGP-----NSTATMVS 549
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
Y + N +D + L +A ++ L +G
Sbjct: 550 RYDADGTRYDPFGNVLPED-------------DDRLFGGEGDDYLSGSAGHDSLHGGVGN 596
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
D + F G DI + + + G
Sbjct: 597 DTLDGGTGFDTLFGDSGDDILSGGSDQDTLHGGAGADALNGGSGHDVLHGDDGADNLIGG 656
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
L A +DL G D ++ + G+ D
Sbjct: 657 SGDDTLHGGAGADDLRGGPGADILHGDGGDDRLDGGTEDDRLYGGAGDDYVKGAAGDDLL 716
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
G G + L+ A + L G D F
Sbjct: 717 SGGD------------GKDKLMGYSGADVLDGGAGADRLYLGAGADIATGGTGSDRFI 762
>gi|213972541|ref|NP_598214.1| collagenase 3 [Rattus norvegicus]
gi|149020733|gb|EDL78538.1| matrix metallopeptidase 13 [Rattus norvegicus]
Length = 472
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 48/161 (29%), Gaps = 27/161 (16%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ R A WS V L F +
Sbjct: 110 RTLKWSQTNLTYRIVNYTPDISHSEV-------EKAFRKAFKVWSDVTPLNFTRIHDGTA 162
Query: 78 DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + P + +FD + W KG L
Sbjct: 163 DIMISFGTKEHGDFYPFDGPSGLLAHAFPP--GPNLGGDAHFDDDETWT-SSSKGYNLFI 219
Query: 123 NALHEIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSV 162
A HE+GH+LGL H +P+Y V
Sbjct: 220 VAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDV 260
>gi|323157087|gb|EFZ43213.1| hemolysin, chromosomal domain protein [Escherichia coli EPECa14]
Length = 717
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 54/200 (27%), Gaps = 33/200 (16%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I + G+D L G + + + G N ++
Sbjct: 439 FNDIFHGADGNDYIEGNYGNDRL----YGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGN 494
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSG------------------NDVFDGSSGLDTFFYY 310
+ G SGND + + A N+ +G ND +G G D + Y
Sbjct: 495 NYLTGGSGNDELQAHGAYNILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYR 554
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYE 369
+ I ++ D + F +N +L + S +
Sbjct: 555 QNYGHHTIADEGGKGDRLHLSDISFD------DIAFKRVGNDLIMNKAINGVLSFNESND 608
Query: 370 D----LIQVIGQDVFESMKH 385
+D + H
Sbjct: 609 VNGITFKNWFAKDASGADNH 628
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 46/164 (28%), Gaps = 19/164 (11%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G I +E ++G +D G N++F + GND +G+ G D +
Sbjct: 404 FEFRTGGIPYDVIDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGNYGNDRLY- 462
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
I + ++ + + +L D L+ +Y
Sbjct: 463 -GDDGDDYISGGQGDDQLFGGSGND--------KLSGGDGNNYLTGGSGNDELQAHGAYN 513
Query: 370 DLIQVIGQDVFE---------SMKHFYEFGLSEGRDITFDSYLY 404
L G D + G DI Y
Sbjct: 514 ILSGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNY 557
Score = 47.1 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 56/197 (28%), Gaps = 19/197 (9%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
Y+ + F I YD D L VE L + K I + +
Sbjct: 400 QYRDFEFRTGGIPYDV----IDNLHSVEELIGGKHDDEFKGGKFNDIFHGADGNDYIEGN 455
Query: 375 IGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHY--- 426
G D +G D F D + L G+D A Y
Sbjct: 456 YGNDRLYGDDGDDYISGGQGDDQLFGGSGNDKLSGGDGNNYLTGGSGNDELQAHGAYNIL 515
Query: 427 -ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH--FSNFGCEEGRF--- 480
G + L+ ++ L F + + + H ++ G + R
Sbjct: 516 SGGTGDDKLYGGGGIDLLDGGEGNDYLNGGFGNDIYVYRQNYGHHTIADEGGKGDRLHLS 575
Query: 481 -VTFDSYLYLGSYDDLR 496
++FD + +DL
Sbjct: 576 DISFDDIAFKRVGNDLI 592
>gi|302875268|ref|YP_003843901.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
gi|307688118|ref|ZP_07630564.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
gi|302578125|gb|ADL52137.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
Length = 304
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP-----DAFKALEYIASHEDLI 537
F YL Y D+ +HY+++G KEGR P F Y+ + D++
Sbjct: 168 FSRTWYLAQYPDVLKSGLD----PYQHYLSYGKKEGRQPLPPKPKDFTDAGYLICNTDVV 223
Query: 538 NAFADAPDLVQAGKDHFSNFGYEEGR 563
+A +G DH+ FG+ EGR
Sbjct: 224 DAI--NRGEYVSGLDHYYEFGWREGR 247
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 75/243 (30%), Gaps = 26/243 (10%)
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV---FGSDRGAAARHYITHGVK 432
G ++ + HF D ++ Y GS D + ++
Sbjct: 16 GNNIKFIVCHF----TGNDNDTAKNNADYFGSCDREASAHYFVDNNEIRQVVEEYNASWH 71
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG-CEEGRFVTFDSYLYLGS 491
G A+ Y + ++ A D + + + G + Y S
Sbjct: 72 CGDGNGAYGITNYNSISIEMCGANGDISETTAKNARNLIRLLMKKYGVQIENVVRHYDAS 131
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPD----AFKALEYIASHEDLINAFADAPDLV 547
+ + F S+ A + V E + F Y+A + D++ + P
Sbjct: 132 RKNCPSPFSSNNWARWTEFKNKIVNEVEEDEMKIRIFSRTWYLAQYPDVLKS-GLDP--- 187
Query: 548 QAGKDHFSNFGYEEGRSI------TFNPDLYLTSYDDLWNVFGSDRS-AAAQHYITHGMK 600
H+ ++G +EGR F YL D+ + + HY G +
Sbjct: 188 ---YQHYLSYGKKEGRQPLPPKPKDFTDAGYLICNTDVVDAINRGEYVSGLDHYYEFGWR 244
Query: 601 EGR 603
EGR
Sbjct: 245 EGR 247
Score = 42.9 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 25/86 (29%), Gaps = 12/86 (13%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI------TFDSYLYLGSYDD 410
+ L + +H+ +G EGR F YL D
Sbjct: 167 IFSRTWYLAQYPDVLKSG-----LDPYQHYLSYGKKEGRQPLPPKPKDFTDAGYLICNTD 221
Query: 411 LRNVFGSDR-GAAARHYITHGVKEGR 435
+ + + HY G +EGR
Sbjct: 222 VVDAINRGEYVSGLDHYYEFGWREGR 247
Score = 42.1 bits (97), Expect = 0.35, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 566 TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRA-LGISGMQFK-SVMNLSEKSR 623
F+ YL Y D+ QHY+++G KEGR L F + +
Sbjct: 167 IFSRTWYLAQYPDVLK----SGLDPYQHYLSYGKKEGRQPLPPKPKDFTDAGYLICNTDV 222
Query: 624 DKADLS 629
A
Sbjct: 223 VDAINR 228
>gi|119489126|ref|ZP_01622032.1| hypothetical protein L8106_22526 [Lyngbya sp. PCC 8106]
gi|119454875|gb|EAW36019.1| hypothetical protein L8106_22526 [Lyngbya sp. PCC 8106]
Length = 454
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 61/187 (32%), Gaps = 18/187 (9%)
Query: 183 PMVSDIVAVQKIYGAPKGSLG----NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
P+++D + + G + + + TI S +L++ G
Sbjct: 26 PLIADTE-LGALLGTNFSDSETLVPGQVQQFPLGVLSLEGADTIVGSSDSELIN----GN 80
Query: 239 VKNYIDLNTESWSSIGGYEKNMTI---------AQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + L ++ G + N ++ + +++ G G+D + G N+
Sbjct: 81 QDDDLILGGLGTDTLFGGQDNDSLDGQGKEDQLFGNLGQDTLNGGEGSDSLFGGQDNDQL 140
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
F + G D G G DT + ++ + + D + E L F D
Sbjct: 141 FGNQGQDTLSGDKGSDTLTGGEGADVFVAQLSGAEPDLITDFQDGIDLIQLPENLEFTDL 200
Query: 350 CIDSVNV 356
+
Sbjct: 201 QLREQGT 207
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 45/155 (29%), Gaps = 30/155 (19%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+++VGSS ++++ GN +++ G D G D+ +++
Sbjct: 64 GADTIVGSSDSELINGNQDDDLILGGLGTDTLFGGQDNDSL--DGQGKEDQLFGN----- 116
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
QD L+ E L + L GQD K
Sbjct: 117 ------LGQDTLNGGE---------------GSDSLFGGQDNDQLFGNQGQDTLSGDKGS 155
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
EG D+ G+ DL F
Sbjct: 156 DTLTGGEGADVF--VAQLSGAEPDLITDFQDGIDL 188
>gi|255958312|ref|NP_001157669.1| matrix metalloproteinase-19 isoform 2 [Mus musculus]
gi|74202055|dbj|BAE23019.1| unnamed protein product [Mus musculus]
Length = 455
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 59/197 (29%), Gaps = 46/197 (23%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
+LL + +V +T L P + A WS V LTF E
Sbjct: 26 KYLLLGHWRKKNLTFRIFNVPSTLSL--------PRVRAALHQAFKYWSSVAPLTFREVK 77
Query: 75 IH-SDIKFISSNNGYVCTPRYDSRYF-----------MEINFDKADVWRYGIGKGTILSH 122
+DI+ + I+FDK ++W G +G L
Sbjct: 78 AGWADIRLSFHGRQSLYCSNTFDGPGKVLAHADIPELGSIHFDKDELWTEGTYQGVNLRI 137
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE+GHALGL H Y + + A +
Sbjct: 138 IAAHEVGHALGLGH--------------------------SRYTQALMAPVYAGYQPFFK 171
Query: 183 PMVSDIVAVQKIYGAPK 199
D+ +Q +YG
Sbjct: 172 LHPDDVAGIQALYGKRS 188
>gi|329115520|ref|ZP_08244261.1| Hypothetical protein APO_2592 [Acetobacter pomorum DM001]
gi|326695157|gb|EGE46857.1| Hypothetical protein APO_2592 [Acetobacter pomorum DM001]
Length = 110
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 13/90 (14%)
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYL 573
+E P F Y+ + D+ A P + HF NFG E R+ F+ + YL
Sbjct: 27 QENTFPIYFDGEWYLLVNPDVAEA-GIDPLV------HFMNFGAHEKRNPNPDFDTETYL 79
Query: 574 TSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
+ + HY+ +G EGR
Sbjct: 80 RLNPYIASF----PLGPFLHYVFYGYHEGR 105
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 34/96 (35%), Gaps = 12/96 (12%)
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEY 529
E + FD YL D+ H++ G E RNP+ F Y
Sbjct: 23 IVPSQENTFPIYFDGEWYLLVNPDVAEAGID----PLVHFMNFGAHEKRNPNPDFDTETY 78
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
+ + I +F P L H+ +GY EGR
Sbjct: 79 LRLNP-YIASFPLGPFL------HYVFYGYHEGRKF 107
Score = 47.1 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 29/84 (34%), Gaps = 12/84 (14%)
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINA 455
I FD YL D+ H++ G E RNP+ F Y+ + + +
Sbjct: 33 IYFDGEWYLLVNPDVAEA----GIDPLVHFMNFGAHEKRNPNPDFDTETYLRLNPYIASF 88
Query: 456 FADAPDLVQVGKDHFSNFGCEEGR 479
H+ +G EGR
Sbjct: 89 PLGPFL-------HYVFYGYHEGR 105
>gi|326316853|ref|YP_004234525.1| putative rtx family calcium-binding cytotoxins and bacteriocins
protein [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373689|gb|ADX45958.1| putative rtx family calcium-binding cytotoxins and bacteriocins
protein [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 1173
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 66/452 (14%), Positives = 107/452 (23%), Gaps = 115/452 (25%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ GDD L G N + G + ++ +
Sbjct: 558 NDIYLGDNGANSFSSGAGDDWL----RGLEGNDHLAAGSGNDVLEGGAGDDSLQGQAGND 613
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGS-----------SGLDTF----------- 307
++G G DV+ G ++V +GND+ G +G DT+
Sbjct: 614 RLLGGEGADVLQGGDGDDVLEGGAGNDILAGGVYDTWNGNYSGAGNDTYLFGRGDGQDII 673
Query: 308 -------------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLS-------------DV 341
+ + + + + D + +
Sbjct: 674 IDDDATVGNLDKLVFKTGVAVADVLAVRDGDALILKINGTTDQVRIDSYFSNDGMNNRQI 733
Query: 342 ERLRFAD--------------------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
E +RF D + + + L G D+ E
Sbjct: 734 EEIRFTDSATTVWKLADIKARMLTGTAGNDTIIGYATADTINGDDGNDTLEGRGGNDLLE 793
Query: 382 SMKHFYEFGLSEGRDITF----------------------DSYLYLGSYDDLRNVF---G 416
G D + L G YD F G
Sbjct: 794 GGAGNDSLYGQAGNDRLLGGDGADVLQGGDGDDVLDGGAGNDILAGGVYDTWNGSFRGAG 853
Query: 417 SDRGAAARH------YITHGVKEGRNPDAFKALEYIA--------SHEDLINAFADAPDL 462
+D R Y + FKA A + L A +D
Sbjct: 854 NDTYLFGRGDGQDTIYNDDAAAGHLDKLVFKAGVKPADVQIERQDNELVLRIAGSDDQVR 913
Query: 463 VQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL--RNVFGSDRGAAARHYITHGVKEGRN 520
V + G G D L S D+ + G+ G Y + +G
Sbjct: 914 VINYFLDDAAGGWALGGIGFEDDAQTLWSVQDVKLMALQGTAGGNRIVGYASDDTLQG-- 971
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D LE ++ L + QAG D
Sbjct: 972 LDGNDTLEGRGGNDLLEGGAGNDSLYGQAGND 1003
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 52/431 (12%), Positives = 115/431 (26%), Gaps = 28/431 (6%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI-GHALGL 134
+ + + + + + ADV + G G + + G
Sbjct: 590 AGSGNDVLEGGAGDDSLQGQAGNDRLLGGEGADVLQGGDGDDVLEGGAGNDILAGGVYDT 649
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G Y D + + + V D A+
Sbjct: 650 WNGNYSGAGNDTYLFGRGDGQDIIIDDDATVGNLDKLVFKTGVAVADVLAVRDGDALILK 709
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ + Y + + + D + + +K + T +I
Sbjct: 710 INGTTDQVRIDSYFSNDGMNNRQIEEIRF---TDSATTVWKLADIKARMLTGTAGNDTII 766
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
GY TI +++ G GND++ G + N+ + +GND G G D
Sbjct: 767 GYATADTINGDDGNDTLEGRGGNDLLEGGAGNDSLYGQAGNDRLLGGDGADVLQGGDGDD 826
Query: 315 L------------------YKIYRFENAIIVYDANEHKQDFLSDVERLRFA-DQCIDSVN 355
+ +R QD + + + D+ +
Sbjct: 827 VLDGGAGNDILAGGVYDTWNGSFRGAGNDTYLFGRGDGQDTIYNDDAAAGHLDKLVFKAG 886
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
VK + E ++++ G D + +++ + G + +G DD + ++
Sbjct: 887 VKPADVQIERQDNELVLRIAGSDDQVRVINYFLDDAAGGWAL-----GGIGFEDDAQTLW 941
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
T G + L+ + ++ L + G D
Sbjct: 942 SVQDVKLMALQGTAGGNRIVGYASDDTLQGLDGNDTLEGRGGNDLLEGGAGNDSLYGQAG 1001
Query: 476 EEGRFVTFDSY 486
+ +
Sbjct: 1002 NDRLLGGDGAD 1012
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/348 (12%), Positives = 97/348 (27%), Gaps = 24/348 (6%)
Query: 42 FDITELNPNAQEVAR---WALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRY 98
F +N E R A W K+ D+ + + T D
Sbjct: 723 FSNDGMNNRQIEEIRFTDSATTVW-KLADIKARMLTGTA-GNDTIIGYATADTINGDDGN 780
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
D+ G G ++ + G +G + G +
Sbjct: 781 DTLEGRGGNDLLEGGAGNDSLYGQAGNDRLLGGDGADVLQGGDGDDVLDGGAGNDILAGG 840
Query: 159 LTSV--MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
+ S+ + G + +D A + K + +VQ +
Sbjct: 841 VYDTWNGSFRGAGNDTYLFGRGDGQDTIYNDDAAAGHL---DKLVFKAGVKPADVQIERQ 897
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE----SVV 272
+ +G DD + + ++D W+ G ++ +V + ++
Sbjct: 898 DNELVLRIAGSDDQVRVINY-----FLDDAAGGWALGGIGFEDDAQTLWSVQDVKLMALQ 952
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G++G + ++G ++++ GND +G G D + +Y + +
Sbjct: 953 GTAGGNRIVGYASDDTLQGLDGNDTLEGRGGND--LLEGGAGNDSLYGQAGNDRLLGGDG 1010
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEY---TASYEDLIQVIGQ 377
D + + D + A + + G
Sbjct: 1011 ADVLQGGDGDDVLDGGAGNDILAGGVYDTWNGSFRGAGNDTYLFGRGS 1058
Score = 42.5 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 67/262 (25%), Gaps = 25/262 (9%)
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
N I + D + + + LR + +LE A + L
Sbjct: 549 ATATTGSDRNDIYLGDNGANSFSSGAGDDWLRGLEGNDHLAAGSGNDVLEGGAGDDSLQG 608
Query: 374 VIGQDVFESMKHFYEFGLSEGRDI----------------TFDSYLYLGSYDDLRNVFGS 417
G D + +G D+ T++ D G
Sbjct: 609 QAGNDRLLGGEGADVLQGGDGDDVLEGGAGNDILAGGVYDTWNGNYSGAGNDTYLFGRGD 668
Query: 418 DRGAAARHYITHGV--KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG- 474
+ T G K A D + + +FSN G
Sbjct: 669 GQDIIIDDDATVGNLDKLVFKTGVAVADVLAVRDGDALILKINGTTDQVRIDSYFSNDGM 728
Query: 475 ----CEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
EE RF + ++ + R + G+ Y T G D LE
Sbjct: 729 NNRQIEEIRFTDSATTVWKLADIKARMLTGTAGNDTIIGYATADTING--DDGNDTLEGR 786
Query: 531 ASHEDLINAFADAPDLVQAGKD 552
++ L + QAG D
Sbjct: 787 GGNDLLEGGAGNDSLYGQAGND 808
>gi|126660424|ref|ZP_01731534.1| iron-regulated protein FrpC, putative [Cyanothece sp. CCY0110]
gi|126618290|gb|EAZ89049.1| iron-regulated protein FrpC, putative [Cyanothece sp. CCY0110]
Length = 2238
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 59/497 (11%), Positives = 129/497 (25%), Gaps = 19/497 (3%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D + + ++ N + G
Sbjct: 149 GNDNITAYGGYNDIDAGNGNDTITAGGGYNDIYARSGYDTIYAYGGANFIDANDDGRGDT 208
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS-MMDASFGYCATPMVSDIVAVQKI 194
G ND + + +S D+ + +D V V
Sbjct: 209 IKAYGGYNNIDAGWGNDNITAAGGYNDISAGSGNDTIYAYGGYNKVYASNGNDWVEVWGG 268
Query: 195 YGAPKGSLGNNIYKIE---VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
G GN+ K TIY GG + +D G ++
Sbjct: 269 GNKVYGGSGNDTIKAHAAYNDIYAGTGYDTIYAYGGANFIDANDDGLGDTI--KAYGGYN 326
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG-SSGLDTFFYY 310
I N I ++ +GND + N + SG+D G +
Sbjct: 327 DIDAGWGNDNITAAGGYNNIDAGNGNDTIYAYGGYNKIYARSGSDTIKAYGGGNEIDAND 386
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
+ +I + + + + ++ + +I+ + +D
Sbjct: 387 DGNADDIYAEGGANVIDTGSGSDRIEAYGGANVINASNGNNTIIVGGVANIVNAGSGNDD 446
Query: 371 LIQVIGQDVFESMKH----FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ G + ++ + E G + +Y Y+ +Y + GSD A
Sbjct: 447 IEAYGGYNEIKAGAGDNRIYAEGGFNNIYAEGKSNYNYIEAYGGGNYIKGSDYQTALETV 506
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG---RFVTF 483
T + + F ++ + A+ ++ G + + G
Sbjct: 507 FTGFETKYVSFGWFSVPILTPTYGQVTVAYNGNDEIKAYGGANVIDAGSGNNDIYAEGGA 566
Query: 484 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 543
+ DD+ G++ A G + A ++ + ++++
Sbjct: 567 NVIDTGSGNDDIEAYGGANVIDA-----GFGNNKIIAGGAANIIDTGSGNDNIQAYGGAN 621
Query: 544 PDLVQAGKDHFSNFGYE 560
G + G
Sbjct: 622 VITAGNGTNTIIAGGGA 638
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/360 (12%), Positives = 91/360 (25%), Gaps = 42/360 (11%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
K + G+D + S + G N I +
Sbjct: 41 DTLKAYALYVRLDGGSGNDTIKAYS-------------GRSDLYGGSGNDYIEAWGISNY 87
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G SGND + ++A+N + +G D G + IY +
Sbjct: 88 INGGSGNDTIKAHAAHNDIYAGTGYDTIYAYGGANFIDANDDGLGDTIYAAGGYNNIDAG 147
Query: 331 NEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK----- 384
+ + + + + + Y+ + G + ++
Sbjct: 148 WGNDNITAYGGYNDIDAGNGNDTITAGGGYNDIYARSGYDTIYAYGGANFIDANDDGRGD 207
Query: 385 ------HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN-- 436
+ G D + G Y+D+ G+D A Y G +
Sbjct: 208 TIKAYGGYNNIDAGWGNDNITAA----GGYNDISAGSGNDTIYAYGGYNKVYASNGNDWV 263
Query: 437 --PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE----GRFVTFDSYLYLG 490
+ + ++ + A G D +G D+ G
Sbjct: 264 EVWGGGNKVYGGSGNDTIKAHAAYNDIYAGTGYDTIYAYGGANFIDANDDGLGDTIKAYG 323
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
Y+D+ +G+D AA G + + + + G
Sbjct: 324 GYNDIDAGWGNDNITAAG-----GYNNIDAGNGNDTIYAYGGYNKIYARSGSDTIKAYGG 378
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/341 (14%), Positives = 96/341 (28%), Gaps = 25/341 (7%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
++ ++ G + + G N T+ + + + G SGND + S +
Sbjct: 9 NNAINPFYKDGDGGNDNFTIYGAGAAYGNGGNDTLKAYALYVRLDGGSGNDTIKAYSGRS 68
Query: 288 VFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ SGND +G SG DT A + IY +Y
Sbjct: 69 DLYGGSGNDYIEAWGISNYINGGSGNDTI--KAHAAHNDIYAGTGYDTIYAYGGANFIDA 126
Query: 339 SDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
+D + + A + + Y D+ G D + + + G
Sbjct: 127 NDDGLGDTIYAAGGYNNIDAGWGNDNITAYGGYNDIDAGNGNDTITAGGGYNDIYARSGY 186
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH----GVKEGRNPDAFKALEYIASHED 451
D + ++ D + D A Y G + + + ++
Sbjct: 187 DTIY--AYGGANFIDANDDGRGDTIKAYGGYNNIDAGWGNDNITAAGGYNDISAGSGNDT 244
Query: 452 LINAFADAPDLVQVGKD--HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH 509
+ G D G + D+ +Y+D+ G D A
Sbjct: 245 IYAYGGYNKVYASNGNDWVEVWGGGNKVYGGSGNDTIKAHAAYNDIYAGTGYDTIYA--- 301
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
Y + + ++ + D+ + + G
Sbjct: 302 YGGANFIDANDDGLGDTIKAYGGYNDIDAGWGNDNITAAGG 342
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 76/302 (25%), Gaps = 11/302 (3%)
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI--YKIEVQQKD 215
+V + + A +DI A GS ++I Y
Sbjct: 530 GQVTVAYNGNDEIKAYGGANVIDAGSGNNDIYAEGGANVIDTGSGNDDIEAYGGANVIDA 589
Query: 216 SPFIQTIYDSGGDDLLDLTLIG------GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
I G +++D G N I + + I G N+ I + +
Sbjct: 590 GFGNNKIIAGGAANIIDTGSGNDNIQAYGGANVITAGNGTNTIIAGGGANV-IDTGSGDD 648
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G +V++ + N +V SG DT A I N +V
Sbjct: 649 DIQAYGGANVIMAGNGTNTIIAGGAANVITTGSGKDTIA-AAGGTNVIISGSGNDDVVVG 707
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI-QVIGQDVFESMKHFYE 388
+ + + + + + + A+ + G D +
Sbjct: 708 GGLNVVVSGAGNDTIIAGGGANVIYDSGGNNQMYGLAAGNVFVKTGSGTDTMAGIGGANI 767
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
F D + + + + D A + Y S
Sbjct: 768 FTKVGSGDTNMYAGGAFNILTKVSDSYDDDTMIALGKGNLLTKVGHGSSTMVAVGLYNIS 827
Query: 449 HE 450
Sbjct: 828 TS 829
Score = 41.3 bits (95), Expect = 0.56, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 1/129 (0%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++ N+VV G +++ + N++ G G D + A + N +I+
Sbjct: 1604 LLAGGKNNVVSGALGDDILVSAGKNNIMFGGEGND-IVFGAGQNNAVLSDEGNDLILTAG 1662
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ SD + + A Q ++ +++ G D+ +
Sbjct: 1663 QSNFVLSGSDDDTVVAAGQTNIIATGTGNDLVFSLGKSNNILAQEGNDIVIGLGQSNRVS 1722
Query: 391 LSEGRDITF 399
+G DI
Sbjct: 1723 GGDGEDILL 1731
Score = 40.2 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 75/249 (30%), Gaps = 13/249 (5%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN-NVFFESSGNDVFDGSS-------- 302
+ ++ +A + +VVG + +D ++ ++ NV F GND+ G+
Sbjct: 1179 DVYNGNGDILVAAGKL--NVVGGALDDDIMVSAGQYNVLFGGEGNDLIFGAGQNNLVLGD 1236
Query: 303 -GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G D F A Y + ++ IV + S + + A + + + + +
Sbjct: 1237 EGND-FILSAGKNNYILSGSDDDTIVAAGQTNVILAGSGDDIVFSAGKSNNILAQEGDDV 1295
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + G+DV + F D D + + G
Sbjct: 1296 VIGLGESNRVSGGDGKDVILAGGKTNIFLGGADDDFIVGIGQNNYISGDRGDDWIIAGGE 1355
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ G + + + ++ + + G D + G
Sbjct: 1356 NNKILDFFGDNTVISIGVSNTIYTFSGNDTIFSGGKKNSVSTDAGDDIILSIGQTNSISG 1415
Query: 482 TFDSYLYLG 490
S L +
Sbjct: 1416 GLGSDLIVA 1424
>gi|166365087|ref|YP_001657360.1| hypothetical protein MAE_23460 [Microcystis aeruginosa NIES-843]
gi|166087460|dbj|BAG02168.1| hypothetical protein MAE_23460 [Microcystis aeruginosa NIES-843]
Length = 1748
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 6/145 (4%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
GN+ Y + +GG D L+L+ ++L + S ++ +
Sbjct: 1514 AGNDAYVFTANSYLGLDTISETTTGGIDTLNLSG-TNNPIRLNLGSISNQTVVTGNLTLK 1572
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
++ VIE+ G SGND + GNS +N GND G +G D +
Sbjct: 1573 LSAVNVIENAFGGSGNDRITGNSLSNALNGGPGNDTLSGGAGNDILTGNQADDILVGGVG 1632
Query: 322 ENAIIVYDA-----NEHKQDFLSDV 341
+ ++ D L+D
Sbjct: 1633 NDRFSYLTGRAFMASDIGLDTLTDF 1657
Score = 47.5 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 61/513 (11%), Positives = 128/513 (24%), Gaps = 48/513 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+S I +N V + D + I + I G
Sbjct: 505 DNSGITLTQANGNVVKNVEVFANLSTGSGNDTINYSVGLRNYENINTGAGDDTINPGRGQ 564
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS---DIVAV 191
G + VD + T+ S F+ + + G+ D +
Sbjct: 565 D-TVDGGEGNDLLIVDYSSNLYAGTTTYPSGFLGHAINPNGTGGWNGIFAAYTRNDGDSD 623
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES-- 249
+ + ++ + + I G D++ G + ++
Sbjct: 624 HVFFSNIERFQIKGTNVNDIFDRGGYGVFNIDGGAGTDIIRYADFGSETAALTVDNSGVT 683
Query: 250 --------------WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
++++ N TI + + + + + N+ SG
Sbjct: 684 LTQANGNVVKNVEVFANLWTGTGNDTINYSVGLRNY------ENINTGAGNDTINTGSGR 737
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-VERLRFADQCIDSV 354
D DG +G D S LY + I N + + D D+V
Sbjct: 738 DTVDGGAGNDLLIVDYSSNLYAGNATYSGGIGSSINPNGFGGWNGYFYAYSRNDGDYDNV 797
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+ T + + G D+ + L + +
Sbjct: 798 TFSNIERFQITGTN------FNDTFDRGGYGVFNIDGGTGTDVIRYADLSSETTGLTVDN 851
Query: 415 FGSDRGAAARHYITH--GVKEGRNPDAFKALEY---IASHEDLINAFADAPDLVQVGKDH 469
G A + + + + Y + ++E++ + G+D
Sbjct: 852 SGITLTQANGNVVKNVEVFANLWTGTGNDTINYSVGLRNYENINTGAGNDTINTGSGRDT 911
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK---- 525
+ V + S LY G+ + S + + RN +
Sbjct: 912 VDGGAGNDLLIVDYSSNLYAGNATYSGGIGSSINPNGFGGWNGYFYAYSRNDGDYDNVTF 971
Query: 526 ------ALEYIASHEDLINAFADAPDLVQAGKD 552
+ ++ L D G D
Sbjct: 972 SNIERFQITGTNFNDSLNTGDGDDIITGGMGND 1004
Score = 45.2 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 53/162 (32%), Gaps = 18/162 (11%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF------------- 298
++ +N+ + I + G++GN+V+ GNSANN +GND +
Sbjct: 1474 TLPSGVENLRLIGDNPI-NGTGNAGNNVLTGNSANNTLAGLAGNDAYVFTANSYLGLDTI 1532
Query: 299 --DGSSGLDTFFYYAPSYLYKIY--RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+ G+DT + ++ N +V K ++ +E
Sbjct: 1533 SETTTGGIDTLNLSGTNNPIRLNLGSISNQTVVTGNLTLKLSAVNVIENAFGGSGNDRIT 1592
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ L + L G D+ + G D
Sbjct: 1593 GNSLSNALNGGPGNDTLSGGAGNDILTGNQADDILVGGVGND 1634
Score = 41.3 bits (95), Expect = 0.48, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 70/226 (30%), Gaps = 11/226 (4%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G++GND +IG + ++ G D DG G D S LY + IV +
Sbjct: 195 TGTNGNDNIIGTAGDDTISPLRGKDAVDGGEGNDLLIVDYSSNLYAGTATYPSGIVVSSL 254
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE-SMKHFYEFG 390
+ + + D V +I + + D F+ +
Sbjct: 255 GSNGNGGWNGNLYAYTRNDGDYDVVNFTNIERF-----QIKGTNVNDTFDRGGYGVFNLD 309
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG-----VKEGRNPDAFKALEY 445
G DI + + + G A + + + + G D
Sbjct: 310 GGAGTDIIRYADFGSETAGLTVDNSGITLTQANGNVVKNVEVFANLSTGSGNDTINYSVG 369
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+ ++E++ D G+D + V + S LY G+
Sbjct: 370 LRNYENINTGAGDDTINPGRGQDTVDGGEGNDLLIVDYSSNLYAGT 415
Score = 40.5 bits (93), Expect = 0.83, Method: Composition-based stats.
Identities = 33/273 (12%), Positives = 69/273 (25%), Gaps = 15/273 (5%)
Query: 72 ETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA 131
+ + +F + + T I+ + + + G
Sbjct: 796 NVTFSNIERFQITGTNFNDTFDRGGYGVFNIDGGTGTDVIRYADLSSETTGLTVDNSGIT 855
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSV-------MSYFMPQDSMMDASFGYCATPM 184
L + + ND+ SV ++ D++ S
Sbjct: 856 LTQANGNVVKNVEVFANLWTGTGNDTINYSVGLRNYENINTGAGNDTINTGSGRDTVDGG 915
Query: 185 VSDIVAVQK----IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVK 240
+ + + +Y G I S D D ++
Sbjct: 916 AGNDLLIVDYSSNLYAGNATYSGGIGSSINPNGFGGWNGYFYAYSRNDGDYDNVTFSNIE 975
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ T S+ + + I +++ +GND++IG N+ D F G
Sbjct: 976 RFQITGTNFNDSLNTGDGDDIITGGMGNDTLNVRNGNDILIGVDPNSSNPGRGEIDSFTG 1035
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
G D F +++ N
Sbjct: 1036 GLGRDRFIL----GDVSWLGYDDGDSTLAGNND 1064
Score = 40.5 bits (93), Expect = 0.91, Method: Composition-based stats.
Identities = 36/298 (12%), Positives = 83/298 (27%), Gaps = 21/298 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGG-------VKNYIDLNTESWSSIGGYEKNMTI 262
+ + + + G D++ G + I L + + + E +
Sbjct: 296 DTFDRGGYGVFNLDGGAGTDIIRYADFGSETAGLTVDNSGITLTQANGNVVKNVEVFANL 355
Query: 263 AQHTVIESV---VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + +++ VG + + + ++ G D DG G D S LY
Sbjct: 356 STGSGNDTINYSVGLRNYENINTGAGDDTINPGRGQDTVDGGEGNDLLIVDYSSNLYAGT 415
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + A + + + + + D+
Sbjct: 416 TTYPSGFLGHAINPNGTGGWNGIFAAYT-----RNDGDSDHVFFSNIERFQIKGTNVNDI 470
Query: 380 FE-SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG-----VKE 433
F+ + G DI + + + G A + + + +
Sbjct: 471 FDRGGYGVFNIDGGAGTDIIRYADFSSETTGLTVDNSGITLTQANGNVVKNVEVFANLST 530
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
G D + ++E++ D G+D + V + S LY G+
Sbjct: 531 GSGNDTINYSVGLRNYENINTGAGDDTINPGRGQDTVDGGEGNDLLIVDYSSNLYAGT 588
Score = 37.8 bits (86), Expect = 5.5, Method: Composition-based stats.
Identities = 61/486 (12%), Positives = 118/486 (24%), Gaps = 34/486 (6%)
Query: 108 DVWRYGIGKGTILSHNALHEIGHAL-GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
+ +G ++ + L EIGHA+ G ++ G ++ +
Sbjct: 113 NQNAGNMGAASLTARVILEEIGHAVDGRLNESDSPGDEGAIFAALVLGESLDAKTLQALK 172
Query: 167 MPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY---KIEVQQKDSPFIQTIY 223
D+ + G + D + + I + I
Sbjct: 173 AEDDTGVINLNGQIVAVEMQDFTGTNGNDNIIGTAGDDTISPLRGKDAVDGGEGNDLLIV 232
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D + L + G T + + G
Sbjct: 233 DYSSNLYAGTATYPSGIVVSSLGSNGNGGWNGNLYAYTRNDGDYDVVNFTNIERFQIKGT 292
Query: 284 SANNVFF-ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ N+ F G DG +G D Y +N+ I + +VE
Sbjct: 293 NVNDTFDRGGYGVFNLDGGAGTDIIRYADFGSETAGLTVDNSGITLTQANGNV--VKNVE 350
Query: 343 RLRFADQCIDSVNVKQRSILEY---TASYEDLIQVIGQDVFESMKHFYEFGLSEGRD--- 396
+ + Y +YE++ G D + EG D
Sbjct: 351 VFA------NLSTGSGNDTINYSVGLRNYENINTGAGDDTINPGRGQDTVDGGEGNDLLI 404
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
+ + S LY G+ + F +G+ + + S+ I F
Sbjct: 405 VDYSSNLYAGT-TTYPSGFLGHAINPNGTGGWNGIFAAYTRNDGDSDHVFFSN---IERF 460
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH--- 513
V D D Y + + + G +
Sbjct: 461 QIKGTNVNDIFDRGGYGVFNIDGGAGTDIIRYADFSSETTGLTVDNSGITLTQANGNVVK 520
Query: 514 ---GVKEGRNPDAFKALEY---IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
+ Y + ++E++ D G+D + G E +
Sbjct: 521 NVEVFANLSTGSGNDTINYSVGLRNYENINTGAGDDTINPGRGQD--TVDGGEGNDLLIV 578
Query: 568 NPDLYL 573
+ L
Sbjct: 579 DYSSNL 584
>gi|226943500|ref|YP_002798573.1| Alginate lyase [Azotobacter vinelandii DJ]
gi|226718427|gb|ACO77598.1| Alginate lyase [Azotobacter vinelandii DJ]
Length = 417
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 62/157 (39%), Gaps = 12/157 (7%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+L G +N + + G + N + ++ + + G++G+D + G + ++V
Sbjct: 250 SLTGTKENDVIRANGGDDKVYGRDGNDELYGNSGNDKLYGNAGDDKLYGTAGDDVLQGGP 309
Query: 294 GNDVFDGSSGLDTFFYYA-PSYLYKIYRFENAIIV----------YDANEHKQDFLSDVE 342
G D+ +G SG D F + + I F + ++ ++ L
Sbjct: 310 GKDLLEGGSGADKFVFTSLEDAGDTITDFRSGDVIDISSLVEDFSRGGDDMSLKDLKSNG 369
Query: 343 RLRFADQCIDSVNVKQR-SILEYTASYEDLIQVIGQD 378
+ F + ++ V + +A+ L+ V+G D
Sbjct: 370 FINFKETTDNTYEVHVDADGAKGSAADVTLVTVVGVD 406
>gi|47212184|emb|CAF95132.1| unnamed protein product [Tetraodon nigroviridis]
Length = 710
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 23/150 (15%)
Query: 17 LLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH 76
L W + ++ S + + +AL WS + L F E +
Sbjct: 189 LTPQIKWKKRHLSWRVRSFPKDSPSLG----RDTVRALMHYALKVWSDIAPLDFHEVAGS 244
Query: 77 S---DIKFI-------------SSNNGYVCTPRYDSRYFMEINFDKADVWRYGI--GKGT 118
I F + P + + +FD + W + G
Sbjct: 245 DADIQIDFTKADHRDGYPFDGPGGTVAHAFFP-GEKFTAGDTHFDDDEAWTFRSPEADGM 303
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
L A+HE GHA+GL+H + + Y
Sbjct: 304 DLFAVAVHEFGHAIGLVHAATVDSIMRPYY 333
>gi|253990547|ref|YP_003041903.1| rtx toxin RtxA [Photorhabdus asymbiotica subsp. asymbiotica ATCC
43949]
gi|211638882|emb|CAR67497.1| similar to rtx toxin rtxa [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781997|emb|CAQ85161.1| similar to rtx toxin rtxa [Photorhabdus asymbiotica]
Length = 4068
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/223 (13%), Positives = 60/223 (26%), Gaps = 20/223 (8%)
Query: 230 LLDL---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
D + + I ++ +++ G + A + G G+DV +
Sbjct: 3689 TFDFLRNSGHLQGDSDIHVSLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVYYSIGTS 3748
Query: 287 NVFFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
N+F G+D G +G DT ++ E + E
Sbjct: 3749 NIFTGGEGDDLGVLMGRENWMFGGNGDDTAVVAGRINQ--VFMGEGNDQSFVFGEGGFID 3806
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ-VIGQDVFESMKHFYEFGLSEGRD 396
+ + V+ + T + ++ G D + + G D
Sbjct: 3807 AGNGHDYVVTSGNYNRVDTGEDQDYAVTIGNNNWVELGEGNDFGRVFGNANRIDGNTGND 3866
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ L Y + N D A +G +
Sbjct: 3867 VIK-----LMGYHAVINGGEGDDHLIAATISKFSQFDGGDGQD 3904
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 27/249 (10%), Positives = 67/249 (26%), Gaps = 24/249 (9%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ +G ++ +++G + + G + +
Sbjct: 3710 GNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVYYSIGTSNIFTGGEGDDLGVLMGRENW- 3768
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
M D+ + A + + ++G N + V +
Sbjct: 3769 ------MFGGNGDDTAVVAGRINQVFMGEGNDQS--FVFGEGGFIDAGNGHDYVVTSGNY 3820
Query: 217 PFIQTIYDSGGDDLL------------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ T D + D + G N ID NT I + I
Sbjct: 3821 NRVDTGEDQDYAVTIGNNNWVELGEGNDFGRVFGNANRIDGNTG-NDVIKLMGYHAVING 3879
Query: 265 HTVIESVVGSSGN--DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ ++ ++ + G ++ ++ F G +G+D+F + ++
Sbjct: 3880 GEGDDHLIAATISKFSQFDGGDGQDLLVLGGYHNSFQGGAGVDSFVVSSKVIDNQVNDIN 3939
Query: 323 NAIIVYDAN 331
I+
Sbjct: 3940 AEDIIVFNG 3948
>gi|158335038|ref|YP_001516210.1| 5'-nucleotidase/2',3'-cyclic phosphodiesterase [Acaryochloris marina
MBIC11017]
gi|158305279|gb|ABW26896.1| 5'-nucleotidase/2',3'-cyclic phosphodiesterase, putative
[Acaryochloris marina MBIC11017]
Length = 2593
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 35/112 (31%), Gaps = 4/112 (3%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
K T++ G+D + G L ++ G T+ +
Sbjct: 2428 DDIKGLRGRDTLFGRDGNDQI----AGNRGRDRLLGEAGDDTLIGGRGRDTLYGGADNDL 2483
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ G G D + G + ++ G D G SG D F + FE
Sbjct: 2484 LTGGPGADKLFGGAGDDTLVGGRGRDHLSGGSGADWFVLEIGQGQDTVLDFE 2535
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 47/142 (33%), Gaps = 7/142 (4%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ G + + T I G T+ + + G+ G D ++G + ++ G
Sbjct: 2412 ITGTNRRDVLRGTAEADDIKGLRGRDTLFGRDGNDQIAGNRGRDRLLGEAGDDTLIGGRG 2471
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
D G + D K++ + +D LS AD + +
Sbjct: 2472 RDTLYGGADND--LLTGGPGADKLFGGAGDDTLVGG--RGRDHLSGG---SGADWFVLEI 2524
Query: 355 NVKQRSILEYTASYEDLIQVIG 376
Q ++L++ + L G
Sbjct: 2525 GQGQDTVLDFEVDQDILGLADG 2546
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 32/130 (24%), Gaps = 28/130 (21%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
V + G++ DV+ G + + G D G G D
Sbjct: 2408 VFNEITGTNRRDVLRGTAEADDIKGLRGRDTLFGRDGNDQI------------------- 2448
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
A +D L + + R L A + L G D
Sbjct: 2449 ---AGNRGRDRLLG------EAGDDTLIGGRGRDTLYGGADNDLLTGGPGADKLFGGAGD 2499
Query: 387 YEFGLSEGRD 396
GRD
Sbjct: 2500 DTLVGGRGRD 2509
>gi|297700574|ref|XP_002827314.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-28-like
[Pongo abelii]
Length = 511
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 56/195 (28%), Gaps = 48/195 (24%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--SIH 76
+ W + Y+ + R A WS V L F E +
Sbjct: 126 QGNKWYKQHLSYRLVNWPERLPELAVRG------AEVRAAFQLWSNVSALEFWEAPATGP 179
Query: 77 SDIKFIS----SNNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNA 124
+DI+ N+G E +FD+ + W +G L
Sbjct: 180 ADIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRRGRNLFVVL 239
Query: 125 LHEIGHALGLMH-PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HEIGH LGL H P P Y S+
Sbjct: 240 AHEIGHTLGLTHSPAPRALMAPYYKRLGRDALLSWD------------------------ 275
Query: 184 MVSDIVAVQKIYGAP 198
D++AVQ +YG P
Sbjct: 276 ---DVLAVQSLYGKP 287
>gi|301620474|ref|XP_002939595.1| PREDICTED: matrix metalloproteinase-19 [Xenopus (Silurana)
tropicalis]
Length = 573
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 76/274 (27%), Gaps = 73/274 (26%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPN-----AQEVARWALGEWSKVVDL 68
A L R L++ I ++ AL W V L
Sbjct: 132 AMRLPRCGKHEQRMSYNLGSKWKKDMLTYKILNTTAQLPEKMVKDELSKALKVWQDVSSL 191
Query: 69 TFEET--SIHSDIKFISSNN-----------------GYVCTPRYDS---RYFMEINFDK 106
F E + +DI + G+ P + +++ D
Sbjct: 192 KFVEVGINATADIDMFFVSGLHNDGIKNAFDGPGRVLGHAFMPPFSKNKKDIDGDLHLDN 251
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
+ W KG L A HE+GHALGL H + ++M+
Sbjct: 252 DEKWTINEKKGVNLLQAAAHELGHALGLDHS-------------------TVTGALMA-- 290
Query: 167 MPQDSMMDASFGYCATPMV--SDIVAVQKIYGA---PKGSLGNNI------YKIEVQQKD 215
GY + DI A+Q +YG + + N K +
Sbjct: 291 -------PTYKGYNPKFQLHEDDIQAIQALYGKPKLNQTTASNATVIKTGDVKTDTTSNT 343
Query: 216 SPFI-------QTIYDSGGDDLLDLTLIGGVKNY 242
P Q++ G + +D + +
Sbjct: 344 KPKAEDKDPKKQSVVKMCGQEPIDTFVSTKNGSI 377
>gi|119486133|ref|ZP_01620193.1| putative calcium binding hemolysin protein [Lyngbya sp. PCC 8106]
gi|119456624|gb|EAW37753.1| putative calcium binding hemolysin protein [Lyngbya sp. PCC 8106]
Length = 339
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + + TIY GG+D ++ G + + G T+ +
Sbjct: 10 SEKIQGAAGDDTIYGLGGNDSIN----GAGGRDLIFGNGQNDLLFGSSDRDTMFGGQGND 65
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
++ GSSG D + G++ N+ S D F G SG D F ++ F ++
Sbjct: 66 NIEGSSGRDDLYGDNDNDTLNGGSDTDTFTGGSGSDLFILSTTEFVNYTRDFNSSE 121
Score = 56.3 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 5/125 (4%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
+ + I + GDD + G N I G +N + + +++ G
Sbjct: 6 GNNNSEKIQGAAGDDTI----YGLGGNDSINGAGGRDLIFGNGQNDLLFGSSDRDTMFGG 61
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-NAIIVYDANEH 333
GND + G+S + + + ND +G S DTF + S L+ + E +
Sbjct: 62 QGNDNIEGSSGRDDLYGDNDNDTLNGGSDTDTFTGGSGSDLFILSTTEFVNYTRDFNSSE 121
Query: 334 KQDFL 338
D +
Sbjct: 122 GDDVV 126
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 45/152 (29%), Gaps = 20/152 (13%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
V+IGN+ + ++G+D G G D+ I+ +++ +++
Sbjct: 2 AVLIGNNNSEKIQGAAGDDTIYGLGGNDSI--NGAGGRDLIFGNGQNDLLFGSSDRDT-- 57
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ +E ++ +DL D F G D+
Sbjct: 58 ---------------MFGGQGNDNIEGSSGRDDLYGDNDNDTLNGGSDTDTFTGGSGSDL 102
Query: 398 -TFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ ++ D + G D +
Sbjct: 103 FILSTTEFVNYTRDFNSSEGDDVVLTNSPFAL 134
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 24/146 (16%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + E + G++G+D + G N+ + G D+ G+ D F S ++
Sbjct: 4 LIGNNNSEKIQGAAGDDTIYGLGGNDSINGAGGRDLIFGNGQNDLLF--GSSDRDTMFGG 61
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD--- 378
+ + + D L + + G D
Sbjct: 62 QGND-----------------NIEGSSGRDDLYGDNDNDTLNGGSDTDTFTGGSGSDLFI 104
Query: 379 --VFESMKHFYEFGLSEGRDITFDSY 402
E + + +F SEG D+ +
Sbjct: 105 LSTTEFVNYTRDFNSSEGDDVVLTNS 130
Score = 38.6 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 16/130 (12%), Positives = 33/130 (25%), Gaps = 4/130 (3%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++ E+++ A + + + + D+ +G D
Sbjct: 8 NNSEKIQGAAGDDTIYGLGGNDSINGAGGRDLIFGNGQNDLLFGSSDRDTMFGGQGNDNI 67
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
S DDL +D T G + E++ D ++ D
Sbjct: 68 EGSSG----RDDLYGDNDNDTLNGGSDTDTFTGGSGSDLFILSTTEFVNYTRDFNSSEGD 123
Query: 459 APDLVQVGKD 468
L
Sbjct: 124 DVVLTNSPFA 133
>gi|301773288|ref|XP_002922069.1| PREDICTED: neutrophil collagenase-like [Ailuropoda melanoleuca]
Length = 475
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 49/184 (26%), Gaps = 30/184 (16%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS-DIKF 81
W + Y+ T D+ + + A WS LTF + S DIK
Sbjct: 119 WKETNLTYRIIKYTKQLSEADV-------ETAIKKAFQVWSNASPLTFTKISQGEPDIKI 171
Query: 82 IS-----SNNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+N P +++FD + W L A HE
Sbjct: 172 AFVRGDHGDNSPFDGPNGILAHAFQPGQGIGGDVHFDADETWTQNSSNYN-LFLVAAHEF 230
Query: 129 GHALGLMHPGS-----YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
GH+LGL H Y D Y + + TP
Sbjct: 231 GHSLGLAHSTDPGALMYPNYAFRDPSTYTLPQDDINGIQTIYGPSSNPIQPTG---PTTP 287
Query: 184 MVSD 187
D
Sbjct: 288 TACD 291
>gi|98647786|gb|ABF58910.1| matrix metalloprotease 1 [Nicotiana tabacum]
Length = 365
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/249 (17%), Positives = 72/249 (28%), Gaps = 54/249 (21%)
Query: 1 MHNIKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALG 60
M++ KP ++ + H + + R+ L N + V A
Sbjct: 130 MNSGKPPAGSQNM--HTVAHFSFFPGRPRWPDSKTDLTYAFLPQNGLTDNIKSVFSRAFD 187
Query: 61 EWSKVVDLTFEETSI--HSDIKFIS---------------SNNGYVCTPRYD------SR 97
WS+V L+F ET+ +DIK + +P
Sbjct: 188 RWSEVTPLSFTETASFQSADIKIGFFAGDHNDGEPFDGPMGTLAHAFSPPGGHFHLDGDE 247
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
++ + + I L A+HEIGH LGL H DS
Sbjct: 248 NWVIDGVPIVEGNFFSILSAVDLESVAVHEIGHLLGLGH---------------SSVEDS 292
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV---QQK 214
+ A+ DI VQ +YG+ G N
Sbjct: 293 IMF-----------PSLAAGTRRVELANDDIQGVQVLYGSNPNFTGPNTVLNPTQENDTN 341
Query: 215 DSPFIQTIY 223
+P +++
Sbjct: 342 GAPKFGSLW 350
>gi|254409670|ref|ZP_05023451.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196183667|gb|EDX78650.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 496
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 73/333 (21%), Gaps = 38/333 (11%)
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ ++G G+D +IG N+ G+D+ G G DT+ +
Sbjct: 14 NALAQGFGLEDNLIIGGLGDDTLIGGRRNDRLVGGIGSDIMKGGLGDDTYIVDSDDKPDN 73
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-------------------Q 358
+ + + E L +
Sbjct: 74 LIESSGGGFDKVISTVSWTLGRNFENLLLVGSGSINGTGNNLNNRILGNAVENILDGREG 133
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
L + LI G D + + G D F L ++
Sbjct: 134 NDSLNGYQGNDILIGGAGNDKLNGGEGNDDMTGGVGDDSYFVDSLLDQVNENFGEGNDVV 193
Query: 419 RGAAARH------------YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVG 466
++ GV+ G D ++ + L + G
Sbjct: 194 FVVNTAANNYTLPANVEALFLREGVRNGNGNDLNNYIQGNSLDNILTGGAGNDFLNALGG 253
Query: 467 KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARH-------YITHGVKEGR 519
D ++ V L + + + + S G G
Sbjct: 254 ADEMRGGIGDDRYGVGDLGDLVIENSGEGFDTVTSSISYTLPVNVEQLILLSGFGAINGT 313
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
D L L AG D
Sbjct: 314 ANDNGTILIGNDESNILTGGVGSDTLEGNAGND 346
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/364 (14%), Positives = 98/364 (26%), Gaps = 52/364 (14%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
LG++ Y ++ K I++ G D ++ +N+ +L SI G N+
Sbjct: 58 LGDDTYIVDSDDKPDNLIES-SGGGFDKVISTVSWTLGRNFENLLLVGSGSINGTGNNLN 116
Query: 262 -----------IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ +S+ G GND++IG + N+ GND G G D++F
Sbjct: 117 NRILGNAVENILDGREGNDSLNGYQGNDILIGGAGNDKLNGGEGNDDMTGGVGDDSYFVD 176
Query: 311 APSYLYKIYRFENAIIV--YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ E +V + + ++VE L + + + ++ +
Sbjct: 177 SLLDQVNENFGEGNDVVFVVNTAANNYTLPANVEALFLREGVRNGNGNDLNNYIQGNSLD 236
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
L G D ++ E G D +G DL + I+
Sbjct: 237 NILTGGAGNDFLNALGGADEMRGGIG-----DDRYGVGDLGDLVIENSGEGFDTVTSSIS 291
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
+ + + + N + EG
Sbjct: 292 YTLPVNVEQLILLSGFGAINGTANDNGTILIGNDESNILTGGVGSDTLEGNA-------- 343
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
G E + L ++L
Sbjct: 344 -------------------------GNDELLGGASNDELVGGVGDDELTGGSGSDRLEGG 378
Query: 549 AGKD 552
G D
Sbjct: 379 EGND 382
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/384 (12%), Positives = 96/384 (25%), Gaps = 42/384 (10%)
Query: 95 DSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE 154
D D I + + LG G +
Sbjct: 56 GGLGDDTYIVDSDDKPDNLIESSGGGFDKVISTVSWTLGRNFENLLLVGSGSINGTGNNL 115
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-----KGSLGNNIYKI 209
N+ L + + + D+ GY ++ K+ G G +G++ Y +
Sbjct: 116 NNRILGNAVENILDGREGNDSLNGYQGNDILIGGAGNDKLNGGEGNDDMTGGVGDDSYFV 175
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE------SWSSIGGYEKNMTIA 263
+ G+D++ + + N E + G + N I
Sbjct: 176 DSLLDQVNENF----GEGNDVVFVVNTAANNYTLPANVEALFLREGVRNGNGNDLNNYIQ 231
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR--- 320
+++ + G +GND + + G+D + D + +
Sbjct: 232 GNSLDNILTGGAGNDFLNALGGADEMRGGIGDDRYGVGDLGDLVIENSGEGFDTVTSSIS 291
Query: 321 ----------------------FENAIIVYDANEHKQDFLSDV--ERLRFADQCIDSVNV 356
+ + N+ V + L + +
Sbjct: 292 YTLPVNVEQLILLSGFGAINGTANDNGTILIGNDESNILTGGVGSDTLEGNAGNDELLGG 351
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
L ++L G D E + G D D+++ D FG
Sbjct: 352 ASNDELVGGVGDDELTGGSGSDRLEGGEGNDRLIGDLGSDDGVDAWIGGSGSDLFVLGFG 411
Query: 417 SDRGAAARHYITHGVKEGRNPDAF 440
+ T G KE F
Sbjct: 412 NTTFYNDGDPTTAGNKEYATIRDF 435
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/289 (10%), Positives = 72/289 (24%), Gaps = 23/289 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + + + D G+G + + L ++ G
Sbjct: 129 DGREGNDSLNGYQGNDILIGGAGNDKLNGGEGNDDMTGGVGDDSYFVDSLLDQVNENFGE 188
Query: 135 MHPGSYNGGYPVYGVDNDYE----------NDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
+ + + + +Y + G +
Sbjct: 189 GNDVVFVVNTAANNYTLPANVEALFLREGVRNGNGNDLNNYIQGNSLDNILTGGAGNDFL 248
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS-------GGDDLLDLTLIG 237
+ A + G G V + T+ S + L+ L+ G
Sbjct: 249 NALGGADEMRGGIGDDRYGVGDLGDLVIENSGEGFDTVTSSISYTLPVNVEQLILLSGFG 308
Query: 238 ------GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
I + + + + G + T+ + + ++G + ND ++G ++
Sbjct: 309 AINGTANDNGTILIGNDESNILTGGVGSDTLEGNAGNDELLGGASNDELVGGVGDDELTG 368
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
SG+D +G G D S + +
Sbjct: 369 GSGSDRLEGGEGNDRLIGDLGSDDGVDAWIGGSGSDLFVLGFGNTTFYN 417
>gi|330993107|ref|ZP_08317045.1| hypothetical protein SXCC_03007 [Gluconacetobacter sp. SXCC-1]
gi|329759877|gb|EGG76383.1| hypothetical protein SXCC_03007 [Gluconacetobacter sp. SXCC-1]
Length = 522
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 13/81 (16%)
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI--TFNPDLYLTSY 576
R F Y+A+++D+ + H+ +G+ EGR F P LY+ +
Sbjct: 21 RESGQFDTEFYLATNQDIAGS-------GYEPLVHYVKYGFREGRRPNRNFRPALYVAQH 73
Query: 577 DDLWNVFGSDRSAAAQHYITH 597
D G D H++
Sbjct: 74 PDA----GLDSRNPFIHFLQT 90
Score = 57.5 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 60/185 (32%), Gaps = 30/185 (16%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 541
FD+ YL + D+ HY+ +G +EGR P+ F+ Y+A H D +
Sbjct: 26 FDTEFYLATNQDIAGSG----YEPLVHYVKYGFREGRRPNRNFRPALYVAQHPD-AGLDS 80
Query: 542 DAPD-------LVQAGKDHFSNFGYEEGRS----------ITFNPDLYLTSYDDLWNVFG 584
P H + F Y DL
Sbjct: 81 RNPFIHFLQTHNGCHIAHHGLLTRFRLEDLSLGVRTLEQLPFFEAGDY----HDLNRDVA 136
Query: 585 SDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFD---HKKVDLYT 641
D + A+H + +G+ EGR L + +++ L + D + ++
Sbjct: 137 RDTTDLAEHALLYGVPEGRRLFKALRVSETLGTLCIGTEPDHATQTLPDGPVPDSIGIFY 196
Query: 642 DYFGD 646
+ G+
Sbjct: 197 NSGGN 201
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 52/146 (35%), Gaps = 27/146 (18%)
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AFKALEYIASHEDLINAFA 457
FD+ YL + D+ HY+ +G +EGR P+ F+ Y+A H D
Sbjct: 26 FDTEFYLATNQDIA----GSGYEPLVHYVKYGFREGRRPNRNFRPALYVAQHPDAGLDSR 81
Query: 458 DA----------------PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
+ L + + S + F++ Y D+
Sbjct: 82 NPFIHFLQTHNGCHIAHHGLLTRFRLEDLSLGVRTLEQLPFFEAGDYHDLNRDVAR---- 137
Query: 502 DRGAAARHYITHGVKEGRNPDAFKAL 527
D A H + +GV EGR FKAL
Sbjct: 138 DTTDLAEHALLYGVPEGRRL--FKAL 161
>gi|116872|sp|P23097|MMP13_RAT RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; AltName:
Full=UMRCASE; Flags: Precursor
gi|203499|gb|AAA72124.1| collagenase [Rattus norvegicus]
Length = 466
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 48/161 (29%), Gaps = 27/161 (16%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ R A WS V L F +
Sbjct: 104 RTLKWSQTNLTYRIVNYTPDISHSEV-------EKAFRKAFKVWSDVTPLNFTRIHDGTA 156
Query: 78 DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + P + +FD + W KG L
Sbjct: 157 DIMISFGTKEHGDFYPFDGPSGLLAHAFPP--GPNLGGDAHFDDDETWT-SSSKGYNLFI 213
Query: 123 NALHEIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSV 162
A HE+GH+LGL H +P+Y V
Sbjct: 214 VAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDV 254
>gi|28057417|gb|AAO29274.1| bacteriocin [Xylella fastidiosa Temecula1]
Length = 1412
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 60/420 (14%), Positives = 110/420 (26%), Gaps = 89/420 (21%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG--TILSHNALHEI---- 128
+ S S + AD + + G G TI+ + ++
Sbjct: 913 GAGNDVLKVSYWSADNVLNGGSGDDLLYGSAYADTYLFNKGDGHDTIIEQSGDDKLVFGE 972
Query: 129 GHA------LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
G A L + G + DS + + Q D + T
Sbjct: 973 GIAAADVRLLRQGQDVVLDLGNGHDSIRLKDWLDSNGYRNGNNDIEQIVFADGTIWTPET 1032
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+ + + + GDD L
Sbjct: 1033 LSSMGLTTLGTL--------------GNDTLNGWQGKDILLGGDGDDTLY---------- 1068
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN--SANNVFFESSGNDVFDG 300
+ + G + + T + G +GNDV+ + SA+NV SG+D+ G
Sbjct: 1069 ---GSGGNDLLLGGAGDDVLDGGTGSNRLEGGAGNDVLKVSYWSADNVLNGGSGDDLLYG 1125
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDAN--------------------EHKQDFL-- 338
S+ DT+ + I + + D +
Sbjct: 1126 SAYADTYLFNKGDGHDTIIEQSGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHDSIRL 1185
Query: 339 -------------SDVERLRFADQCI-----------DSVNVKQRSILEYTASYEDLIQV 374
+D+E++ FAD I ++ L + L+
Sbjct: 1186 KDWLDSNGYRNGNNDIEQIVFADGTIWTPETLSSMGLTTLGTLGNDTLNGWQGKDILLGG 1245
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G DV + G D+ Y + + L G D + + T+ +G
Sbjct: 1246 DGDDVLDGGTGSNRLEGGAGNDVLK--VSYWSADNVLNGGSGDDTLYGSAYADTYLFNKG 1303
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 89/312 (28%), Gaps = 31/312 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ Q + D+ G L+ G + + + G + ++ +
Sbjct: 823 DRTAVTPDGRQALADA-GIPLIAGNAEGSDATDLLFGDAGANLLRGGGGDDLLSGGDGDD 881
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---------FYYAPSYLYKIYR 320
++ G +GND + G++ N+V +G++ +G +G D S +Y
Sbjct: 882 TLEGGAGNDTLSGDAGNDVLDGGTGSNRLEGGAGNDVLKVSYWSADNVLNGGSGDDLLYG 941
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVIGQDV 379
A D + +E+ D+ + + + + L G D
Sbjct: 942 SAYADTYLFNKGDGHDTI--IEQ-SGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHDS 998
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSY--DDLRNVFGSDRGAAARHYITHGVKE---G 434
G G + G+ + + G + +G +
Sbjct: 999 IRLKDWLDSNGYRNGNNDIEQIVFADGTIWTPETLSSMGLTTLGTLGNDTLNGWQGKDIL 1058
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF----------- 483
D L ++ L+ D G + + V++
Sbjct: 1059 LGGDGDDTLYGSGGNDLLLGGAGDDVLDGGTGSNRLEGGAGNDVLKVSYWSADNVLNGGS 1118
Query: 484 -DSYLYLGSYDD 494
D LY +Y D
Sbjct: 1119 GDDLLYGSAYAD 1130
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 47/345 (13%), Positives = 85/345 (24%), Gaps = 57/345 (16%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ D+ G G T+ + LG +GG ++ ND
Sbjct: 1045 GNDTLNGWQGKDILLGGDGDDTLYGSGGNDLL---LGGAGDDVLDGGTGSNRLEGGAGND 1101
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
+SY+ + + S +YG+ + Y
Sbjct: 1102 VLK---VSYWSADNVLNGGSGD-------------DLLYGSAYA----DTYLFN----KG 1137
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI------------AQ 264
TI + GDD L + L + + +I
Sbjct: 1138 DGHDTIIEQSGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHDSIRLKDWLDSNGYRNG 1197
Query: 265 HTVIESVVGSSGNDVVIGNSANNVF----FESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ IE +V + + + + GND +G G D +
Sbjct: 1198 NNDIEQIV--FADGTIWTPETLSSMGLTTLGTLGNDTLNGWQGKDILLGGDGDDVLDGGT 1255
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED--LIQVIGQD 378
N + D L + + L +A + + G D
Sbjct: 1256 GSNRLE----GGAGNDVLK----VSYWSADNVLNGGSGDDTLYGSAYADTYLFNKGDGHD 1307
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ EG + + + S DDL +F
Sbjct: 1308 TIIEQSGDDKLVFGEG--LHREEACFTRSGDDLSILFNGSEDQVT 1350
Score = 42.9 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 38/303 (12%), Positives = 71/303 (23%), Gaps = 67/303 (22%)
Query: 270 SVVGSSGNDVVIGNSANN------------------VFFESSGNDVFDGSSGLDTFFYYA 311
+ GS D++ G++ N +GND G +G D
Sbjct: 846 NAEGSDATDLLFGDAGANLLRGGGGDDLLSGGDGDDTLEGGAGNDTLSGDAGND--VLDG 903
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED- 370
+ ++ ++ ++ + +L +A +
Sbjct: 904 GTGSNRLEGGAGNDVL---------------KVSYWSADNVLNGGSGDDLLYGSAYADTY 948
Query: 371 -LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D + EG + + D G D +
Sbjct: 949 LFNKGDGHDTIIEQSGDDKLVFGEG----------IAAADVRLLRQGQDVVLDLG----N 994
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G R D + Y + D+ + + S+ G + D+
Sbjct: 995 GHDSIRLKDWLDSNGYRNGNNDIEQIVFADGTIWTP--ETLSSMGLTTLGTLGNDTLNGW 1052
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D L G D + L A + L A
Sbjct: 1053 QGKDILLGGDGDDTLYGS--------------GGNDLLLGGAGDDVLDGGTGSNRLEGGA 1098
Query: 550 GKD 552
G D
Sbjct: 1099 GND 1101
>gi|126655037|ref|ZP_01726476.1| hypothetical protein CY0110_15537 [Cyanothece sp. CCY0110]
gi|126622516|gb|EAZ93221.1| hypothetical protein CY0110_15537 [Cyanothece sp. CCY0110]
Length = 8087
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/258 (12%), Positives = 72/258 (27%), Gaps = 45/258 (17%)
Query: 155 NDSFLTSVMSYFMPQDSMMDASFGYCATPM-VSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
N + + SY + ++ + D A + + ++ + +
Sbjct: 623 NIIGSSGINSYIIQNSGRLEGTIENPVGSTNSFDYTAYKADVAVNLKNATVSLDSTNIFK 682
Query: 214 KDSPFIQTIYDSGGDDLL----------------DLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + I + +GG D + D L N + G
Sbjct: 683 QSATGIFFPFGNGGADGIPQNNGKISEIKGGSFNDHLLADSDNNVTLSGNRGDDYLEGSN 742
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
++ ++ ++++ G G+D + G + N+ +GND G SG DT
Sbjct: 743 QDDVLSGDAGLDTIFGHQGDDDIEGGNQNDSLDGGAGNDTIAGGSGDDTVI--------- 793
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
A +D L E ++ + +I G
Sbjct: 794 ----AGADNDSVDGGAGEDSLEGGE---------------GDDTIKGGDDDDTIIGGTGN 834
Query: 378 DVFESMKHFYEFGLSEGR 395
D + + +
Sbjct: 835 DELKGETGSDTYIFEDNW 852
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 54/470 (11%), Positives = 115/470 (24%), Gaps = 31/470 (6%)
Query: 64 KVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK------- 116
+ F + +I + + +N +I + + +
Sbjct: 208 DDATINFSAVTPDVEINYQNGDNNVNSFAFTRQDNSQQITAQERNTLTFTGNDKDETKID 267
Query: 117 ------------GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
+ + IG + Y N + + +
Sbjct: 268 LSNLNTDKTFTVENDGTIITDYIIGGTPKSLTVSDIKNIEAGYRNTNSLDLSDVTSDITF 327
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY------KIEVQQKDSPF 218
DS+ T D ++ G + N Q +
Sbjct: 328 TLKSDDSIAVVYGTNSLTFKNID--NLKGGQGKNTYTFENGAVLAGILTGGATNQNNDIV 385
Query: 219 IQTIYDSGGDDLLDLTL--IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ IY D + T G I+ + + I ++ VG
Sbjct: 386 NEIIYQGSADRTITFTGDKTGNANGLINSGFTKIGKVTTGKGEDNITGFGGNDNFVGGED 445
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ- 335
ND ++GN+ N+ G D G +G DT S Y+ V + +
Sbjct: 446 NDNLVGNTGNDSLTGEVGKDSLSGGTGNDTLVGGDDSDTYQFEDDWGEDTVVELDNEGTA 505
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D L + I S NV S + + + + +S+
Sbjct: 506 DTLDFSSVTQDITVTIGSKNVLVDSNTNKVRGNNN-GEANSIEKVIGSSGNNTYKISDNW 564
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
+ F + ++ + G+ + + N
Sbjct: 565 EGKFTLDNSENHTNSTLDLSAIANRNLDIEIYSDGIIIIDKTSETSKKNNKITALGVKNI 624
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ + ++ G E + +S+ Y D+ + +
Sbjct: 625 IGSSGINSYIIQNSGRLEGTIENPVGSTNSFDYTAYKADVAVNLKNATVS 674
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 7/139 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + + GGD+ L GG + L +E I G I
Sbjct: 3750 GNITVEGGNDDDNLMLIGGDNDRTRILRGGEGSDFILGSEGDDEIYGDAGEDLINAGEGN 3809
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRF 321
++V G +G+D ++G ++ +G DV G +G DT + +
Sbjct: 3810 DTVSGGTGDDQILGGEGDDQIQGDAGEDVILGEAGNDTIQGGTDNDYLVGGLDSDNVQGE 3869
Query: 322 ENAIIVYDANEHKQDFLSD 340
+ + D L D
Sbjct: 3870 AGNDTIEWSIGDGVDSLVD 3888
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 16/168 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + TI+ GDD ++ GG +N +I G + T+ +
Sbjct: 744 DDVLSGDAGLDTIFGHQGDDDIE----GGNQNDSLDGGAGNDTIAGGSGDDTVIAGADND 799
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
SV G +G D + G ++ +D G +G D ++ +
Sbjct: 800 SVDGGAGEDSLEGGEGDDTIKGGDDDDTIIGGTGND-----------ELKGETGSDTYIF 848
Query: 330 ANEHKQDFLSDVERL-RFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ D + ++ + + + S LI G
Sbjct: 849 EDNWGHDVVKAIQSTKNKTAERDTLDLSAVTDKVTHVLSNNILIAGTG 896
Score = 50.6 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 54/185 (29%), Gaps = 14/185 (7%)
Query: 221 TIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV 280
TI +G + G I+L T S + + I++ +V+G SGND++
Sbjct: 3663 TIQATGTSQADTYEISGLTGTNINLATGGGSDL------VFISESQGDVTVMGGSGNDMI 3716
Query: 281 IGNS--ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
+ + GND + + +T Y + + +
Sbjct: 3717 FLTDVNGDVLVQGEEGNDSIEVN--YETVTYSNGKGNITVEGGNDDDNLMLIGGDNDRTR 3774
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
LR + + + + A + + G D + EG D
Sbjct: 3775 ----ILRGGEGSDFILGSEGDDEIYGDAGEDLINAGEGNDTVSGGTGDDQILGGEGDDQI 3830
Query: 399 FDSYL 403
Sbjct: 3831 QGDAG 3835
>gi|114765174|ref|ZP_01444318.1| hypothetical protein 1100011001332_R2601_15170 [Pelagibaca
bermudensis HTCC2601]
gi|114542449|gb|EAU45476.1| hypothetical protein R2601_15170 [Roseovarius sp. HTCC2601]
Length = 996
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G ++ + + E++ GS+ D+++G ++ G+D+ G G D
Sbjct: 893 GSFDDGLLLEGDAGSETLEGSAKPDILLGGDGDDTLIGQGGDDILHGGEGRDVAVLPGAQ 952
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
Y R E + + VE L F+D
Sbjct: 953 ADYAFTREEGR--LVANGPQGIVRMVQVEALSFSDA 986
Score = 38.2 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
F D + + LE +A + L+ G D EGRD+
Sbjct: 894 SFDDGLLLEGDAGS-ETLEGSAKPDILLGGDGDDTLIGQGGDDILHGGEGRDV 945
>gi|297263898|ref|XP_002798895.1| PREDICTED: matrix metalloproteinase-17-like [Macaca mulatta]
Length = 845
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 45/136 (33%), Gaps = 32/136 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW----ALGEWSKVVDLTFEETSIHS- 77
W+ + ++ +P ++ R AL WS + L F E + +
Sbjct: 373 WNKRNLSWRVRTFPRD---------SPLGRDTVRALMYYALKVWSDIAPLNFHEVAGSAA 423
Query: 78 --DIKFI-------------SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK--GTIL 120
I F + P D + +FD + W + G L
Sbjct: 424 DIQIDFSKADHNDGYPFDGPGGTVAHAFFP-GDHHTAGDTHFDDDEAWTFRSSDAHGMDL 482
Query: 121 SHNALHEIGHALGLMH 136
A+HE GHA+GL H
Sbjct: 483 FAVAVHEFGHAIGLSH 498
>gi|197285892|ref|YP_002151764.1| toxin [Proteus mirabilis HI4320]
gi|194683379|emb|CAR44095.1| putative toxin [Proteus mirabilis HI4320]
Length = 4620
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 64/223 (28%), Gaps = 20/223 (8%)
Query: 230 LLDL---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
LD + I ++ +++ G + N A + G G+D +
Sbjct: 4241 TLDFLRNSGHLKGDGDIHVSLGNYNFNWGGDGNDLGAYLGDNNNFWGGRGSDTFYATGIS 4300
Query: 287 NVFFESSGNDV---------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD- 336
N+F GND+ G G DT +Y + + E +
Sbjct: 4301 NIFTGGYGNDLGVLMGRSNMMFGGDGDDTAIIAGRINN--VYLGDGLDKAFVFGEGGEIH 4358
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+ + + + ++ + ++ + G D + ++ G
Sbjct: 4359 TNAGNDYVVTTGNYNRIFSGSEQDFVVTIGNHNQISLEEGNDFAKIFGNYNRLNGGGG-- 4416
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
D + L Y + + + A + + G +
Sbjct: 4417 ---DDEIQLMGYHAVVDGGDGNDQLIAASFSKFSLLNGNTGND 4456
Score = 42.1 bits (97), Expect = 0.28, Method: Composition-based stats.
Identities = 33/255 (12%), Positives = 66/255 (25%), Gaps = 43/255 (16%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
DI N + + + + G G T + I
Sbjct: 4253 GDGDIHVSLGNYNFN---WGGDGNDLGAYLGDNNNFWGGRGSDTF-YATGISNI------ 4302
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G N + G N + + + +
Sbjct: 4303 FTGGYGNDLGVLMGRSNMMFGGDGDDTAIIAGRINNVYLGDGLDKAFVFGEG-------- 4354
Query: 195 YGAPKGSLGNN---IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
G + GN+ + + G + + L +++
Sbjct: 4355 -GEIHTNAGNDYVVTTGNYNRIFSGSEQDFVVTIGNHNQISLEEGNDFAKIF----GNYN 4409
Query: 252 SIGGYEKNMTI---AQHTVIESVVGSSGNDVVIGNSAN--NVFFESSGNDVFD------- 299
+ G + I H V++ G GND +I S + ++ ++GND+
Sbjct: 4410 RLNGGGGDDEIQLMGYHAVVD---GGDGNDQLIAASFSKFSLLNGNTGNDIIILGGYQNH 4466
Query: 300 --GSSGLDTFFYYAP 312
G +G+D+F
Sbjct: 4467 FKGGNGIDSFLINNN 4481
Score = 37.8 bits (86), Expect = 5.9, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 73/264 (27%), Gaps = 31/264 (11%)
Query: 69 TFEETSIHSDIK-FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
TF T+ D F+ + Y+ + + ++ + G G + +A +
Sbjct: 48 TFAVTAYTGDGHDFVRGGSAYLKIIDENGDLDVRGLNAWGEIEKSGHGDLKYVGASAAIK 107
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
I H Y G Y + ++ + + + T
Sbjct: 108 INHT-------GYEYGNINYSGAAIANIITRKGAISNINYQGAGGYNQIWHETNT----- 155
Query: 188 IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT 247
G Y + + + +S G+ ++ +GG
Sbjct: 156 ---------GNMTFKGGGGY----NKLVRTWFNSYQNSKGN--INFEGLGGGNGIFSRVE 200
Query: 248 ESWS-SIGGYEKNMTIAQHTV--IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
GG +N+ I + I + N + + + + E+SGN F G G
Sbjct: 201 TGDIKFTGGGLENVLIREGKSGDIFMYGAGANNRLTRISRNTDTYKETSGNIYFSGGGGY 260
Query: 305 DTFFYYAPSYLYKIYRFENAIIVY 328
+ + Y +
Sbjct: 261 NHIYSNIAQGNITFYGAGAYNEII 284
>gi|60207592|gb|AAX14804.1| matrix metalloproteinase 3/10a [Notophthalmus viridescens]
Length = 484
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 57/195 (29%), Gaps = 51/195 (26%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIK 80
W + Y+ T D+ R A WS V LTF +DI+
Sbjct: 107 TWRTTSLTYRILNYTPDMAEADVD-------TAIRRAFKVWSDVTPLTFSRIYEGTADIQ 159
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ P + +FD+ + W G G L A
Sbjct: 160 ISFGAGVHGDFYPFDGPHGTLAHAFAPGNS--IGGDAHFDEDETWTAGSA-GYNLFLVAA 216
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GH+LGL H G + + SY P A F
Sbjct: 217 HEFGHSLGLYHSGD---------------RSALMYPTYSYTDP------ARFRLPQ---- 251
Query: 186 SDIVAVQKIYGAPKG 200
D+ +Q +YGA
Sbjct: 252 DDVDGIQALYGASPN 266
>gi|258625058|ref|ZP_05719978.1| hemolysin-type calcium-binding protein [Vibrio mimicus VM603]
gi|258582654|gb|EEW07483.1| hemolysin-type calcium-binding protein [Vibrio mimicus VM603]
Length = 496
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 67/177 (37%), Gaps = 17/177 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + + G D ++ + I++N + + GG + T++ + I
Sbjct: 273 GNGTVFMTSGKEVVNGGKGTDTINYGHEFLSNSGINVNLTTGEASGGIAEGDTLS--SSI 330
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
E+++GS+ + ++GNS+NN F SG+D + + G D +
Sbjct: 331 ENLIGSNYSGTIVGNSSNNNLFGGSGSDKIESADGDDLI--------------SGGAYLL 376
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
+ + K L ++ +D D +N + + +I G D +H
Sbjct: 377 TSKDAKYITLGG-KKYDVSDFDSDIINGGNGNDTIIGGPNDYIIGGSGVDTLVLSEH 432
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 45/146 (30%), Gaps = 10/146 (6%)
Query: 283 NSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-SDV 341
N F +SG +V +G G DT Y + D L S +
Sbjct: 271 GEGNGTVFMTSGKEVVNGGKGTDTINYGHEFLSNSGINVNLTTGEASGGIAEGDTLSSSI 330
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH--------FYEFGLSE 393
E L ++ V + L + + + G D+ + + G +
Sbjct: 331 ENLIGSNYSGTIVGNSSNNNLFGGSGSDKIESADGDDLISGGAYLLTSKDAKYITLGGKK 390
Query: 394 GRDITFDSYLY-LGSYDDLRNVFGSD 418
FDS + G+ +D +D
Sbjct: 391 YDVSDFDSDIINGGNGNDTIIGGPND 416
>gi|220908893|ref|YP_002484204.1| hypothetical protein Cyan7425_3521 [Cyanothece sp. PCC 7425]
gi|219865504|gb|ACL45843.1| hypothetical protein Cyan7425_3521 [Cyanothece sp. PCC 7425]
Length = 161
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 35/96 (36%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L G + + + G + T+ + ++G +GND + GN+ ++
Sbjct: 10 DDQLQGTQEGDVMFGYAGDDILSGGPGDDTLHGGLGNDRLLGGAGNDFLYGNAGDDCLEG 69
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
G D G +G D + Y +I +
Sbjct: 70 GPGYDHLRGGAGNDRYIYTLGDGFDRIEDELGENTL 105
Score = 53.6 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 38/94 (40%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ GY + ++ +++ G GND ++G + N+ + ++G+D +G G D
Sbjct: 20 DVMFGYAGDDILSGGPGDDTLHGGLGNDRLLGGAGNDFLYGNAGDDCLEGGPGYDHLRGG 79
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
A + Y + + D L + L
Sbjct: 80 AGNDRYIYTLGDGFDRIEDELGENTLELRQISSL 113
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I G ++ + + + G +G+D++ G ++ GND G +G D F Y
Sbjct: 4 IHGSLQDDQLQGTQEGDVMFGYAGDDILSGGPGDDTLHGGLGNDRLLGGAGND--FLYGN 61
Query: 313 SYLYKIYRFENAIIVYDANEHKQ 335
+ + + + +
Sbjct: 62 AGDDCLEGGPGYDHLRGGAGNDR 84
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ I + + G+ DV+ G + +++ G+D G G D + +Y
Sbjct: 2 VHIHGSLQDDQLQGTQEGDVMFGYAGDDILSGGPGDDTLHGGLGNDRLL--GGAGNDFLY 59
Query: 320 RFENAIIVYDANEHKQ 335
+ +
Sbjct: 60 GNAGDDCLEGGPGYDH 75
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 29/126 (23%), Gaps = 37/126 (29%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
GS +D + G +V F +G+D+ G G DT
Sbjct: 6 GSLQDDQLQGTQEGDVMFGYAGDDILSGGPGDDT-------------------------- 39
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
L + L A + L G D + +
Sbjct: 40 -----------LHGGLGNDRLLGGAGNDFLYGNAGDDCLEGGPGYDHLRGGAGNDRYIYT 88
Query: 393 EGRDIT 398
G
Sbjct: 89 LGDGFD 94
>gi|294676422|ref|YP_003577037.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294475242|gb|ADE84630.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 358
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 52/176 (29%), Gaps = 13/176 (7%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G I + E + G +G D + + N++ G+DV G +G D +
Sbjct: 41 WGTAAADRIFGGELGEHIYGRAGADTIFAGAGNDLLRGGDGDDVLFGDTGAD--VLWGDL 98
Query: 314 YLYKIYRFENAIIVYDA-------NEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILE 363
+ +++ + D L ++L D + + +L
Sbjct: 99 GADNLAGGRGNDMLHGGCGADRLFGDFGNDTLEGGAQADQLTGGDGRDVLLGGEGNDLLL 158
Query: 364 YTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+ L G D + +G D D D L G+D
Sbjct: 159 GGDGADSLTGGAGNDRSRGGEGNDLL-SDDGTDADADLLCGDAGNDTLVGGNGADS 213
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 61/222 (27%), Gaps = 25/222 (11%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ ++ G D L GG N + + G N T+
Sbjct: 81 GDDVLFGDTGADVLWGDLGADNL----AGGRGNDMLHGGCGADRLFGDFGNDTLEGGAQA 136
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G G DV++G N++ G D G +G D R
Sbjct: 137 DQLTGGDGRDVLLGGEGNDLLLGGDGADSLTGGAGND--------------RSRGGEGND 182
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL--IQVIGQDVFESMKHF 386
++ D +D + L V L + + + V
Sbjct: 183 LLSDDGTD--ADADLLCGDAGNDTLVGGNGADSLYGGSGNDVIRDTWVQDASGLLVADDA 240
Query: 387 YEFGLSEGRDITF---DSYLYLGSYDDLRNVFGSDRGAAARH 425
EG D F + G+ +D+ + + A A
Sbjct: 241 ARIDAGEGDDTIFASGADTIVTGAGEDVIVIGAAGDTALATS 282
>gi|170744308|ref|YP_001772963.1| hemolysin-type calcium-binding region [Methylobacterium sp. 4-46]
gi|168198582|gb|ACA20529.1| Hemolysin-type calcium-binding region [Methylobacterium sp. 4-46]
Length = 260
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/240 (15%), Positives = 69/240 (28%), Gaps = 30/240 (12%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ T+Y GG D++ Y A +++
Sbjct: 32 NADLATGRDTVYGGGGSDVIYWAYDTTGSLL-------------YGDAGDGAADGGNDTI 78
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G SGND + G +N GND DG SG DT + ++ ++
Sbjct: 79 TGGSGNDTIFGEGGDNYIRGGKGNDAIDGGSGNDTIRGSGGEGMDTVHGGSGNDLITYTT 138
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE--F 389
+ + + + LI +G D F
Sbjct: 139 DAS---------------SVRLFGDAGDDSIAGGYGADTLIGGVGNDTLSGGLGADSFVF 183
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
G ++G D+ D + G L +++ A+ ++ + + Y S+
Sbjct: 184 GANDGTDVVRDFSVGQGDKIALIAGTTAEKSRASDGFLQLNFYDSGHVLGGSVELYGVSY 243
Score = 44.8 bits (104), Expect = 0.055, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 48/146 (32%), Gaps = 10/146 (6%)
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ G+ +Y TI G+D + G + + +I G N
Sbjct: 56 DTTGSLLYGDAGDGAADGGNDTITGGSGNDTI----FGEGGDNYIRGGKGNDAIDGGSGN 111
Query: 260 MTI--AQHTVIESVVGSSGNDVVIGNSANN--VFFESSGNDVFDGSSGLDTFFYYAPSYL 315
TI + +++V G SGND++ + + F +G+D G G DT
Sbjct: 112 DTIRGSGGEGMDTVHGGSGNDLITYTTDASSVRLFGDAGDDSIAGGYGADTLI--GGVGN 169
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDV 341
+ A D + D
Sbjct: 170 DTLSGGLGADSFVFGANDGTDVVRDF 195
>gi|50950195|ref|NP_001002967.1| stromelysin-1 precursor [Canis lupus familiaris]
gi|62900543|sp|Q6Y4Q5|MMP3_CANFA RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
metalloproteinase-3; Short=MMP-3; Flags: Precursor
gi|34391862|gb|AAO63580.1| stromelysin 1 [Canis lupus familiaris]
Length = 478
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/199 (20%), Positives = 57/199 (28%), Gaps = 50/199 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH------ 76
W + Y+ T AL W +V LTF T
Sbjct: 109 WRKTHLTYRIMNYTPDLP-------RDAVDSAIEKALNVWKEVTPLTFSRTDEGEADIKI 161
Query: 77 -------SDIK-FISSNN--GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
D F N G+ P + + +FD + W GT L A H
Sbjct: 162 SFAVRDHGDFNPFDGPGNVLGHAYPP--GPGIYGDAHFDDDEQWTSDT-SGTNLFLVAAH 218
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H S + Y + A F
Sbjct: 219 ELGHSLGLFHSADP--------------------SALMYPVYNVLADLARFHLSQ----D 254
Query: 187 DIVAVQKIYGAPKGSLGNN 205
D+ +Q +YG P N+
Sbjct: 255 DVNGIQSLYGGPPSDSSND 273
>gi|218532949|ref|YP_002423765.1| hypothetical protein Mchl_5072 [Methylobacterium chloromethanicum
CM4]
gi|218525252|gb|ACK85837.1| hypothetical protein Mchl_5072 [Methylobacterium chloromethanicum
CM4]
Length = 223
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 65/215 (30%), Gaps = 38/215 (17%)
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 456
FD LYL D+ + H+ G +EGR P+ F L Y + L A
Sbjct: 33 LFDESLYLFEAPDVM----REEAEPIEHFCRFGWREGRRPNLYFDPLWYRDRY--LEGAD 86
Query: 457 ADAPDLVQVGKDHFSNFGCEEG--RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 514
+ H+ G G FD + Y +Y R A HY+ H
Sbjct: 87 RNP-------LVHYLTIGESAGCRPVCYFDPHWYARTY------RLPSRANALAHYLAHR 133
Query: 515 VKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE--GRSITFNPDL 571
+ P+ F Y+ + + H FG S F+
Sbjct: 134 RSQRFAPNPDFDLAFYLDRY-------GVEIGPNRDPFAHHLRFGAARDIDPSPHFDAGH 186
Query: 572 YL-TSYDDLWNVF-----GSDRSAAAQHYITHGMK 600
Y ++ DL +D HY+ +
Sbjct: 187 YRKSTMTDLTPETRTPWAAADLRVPLVHYLDTQYR 221
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 62/218 (28%), Gaps = 33/218 (15%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDL 411
+ L + + + + E ++HF FG EGR ++ FD Y Y +
Sbjct: 30 GSGLFDESLYLFEAPDVMREEA-----EPIEHFCRFGWREGRRPNLYFDPLWYRDRYLE- 83
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNP-DAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
G+DR HY+T G G P F Y ++ H+
Sbjct: 84 ----GADR-NPLVHYLTIGESAGCRPVCYFDPHWYARTYR---------LPSRANALAHY 129
Query: 471 SNFGCEE--GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKAL 527
+ FD YL Y H++ G +P F A
Sbjct: 130 LAHRRSQRFAPNPDFDLAFYLDRYGVEIGP----NRDPFAHHLRFGAARDIDPSPHFDAG 185
Query: 528 EYIASH-EDLINAFADAPDLVQA--GKDHFSNFGYEEG 562
Y S DL H+ + Y
Sbjct: 186 HYRKSTMTDLTPETRTPWAAADLRVPLVHYLDTQYRRS 223
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 29/92 (31%), Gaps = 18/92 (19%)
Query: 516 KEGRNPDA---FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPD 570
+E R F Y+ D++ +HF FG+ EGR F+P
Sbjct: 23 RERRLIAGSGLFDESLYLFEAPDVMREE-------AEPIEHFCRFGWREGRRPNLYFDPL 75
Query: 571 LYLTSYDDLWNVFGSDRSAAAQHYITHGMKEG 602
Y Y HY+T G G
Sbjct: 76 WYRDRY------LEGADRNPLVHYLTIGESAG 101
>gi|254474925|ref|ZP_05088311.1| hypothetical protein RR11_760 [Ruegeria sp. R11]
gi|214029168|gb|EEB70003.1| hypothetical protein RR11_760 [Ruegeria sp. R11]
Length = 1112
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 51/200 (25%), Gaps = 21/200 (10%)
Query: 206 IYKIEVQQKDSPFIQTIY--DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
Y++ + + D GG L + + +I G + I
Sbjct: 859 TYQLGSSDVGATISVRVSYLDGGGTPELLYSNSTAAVAAPPPPPNAGQNITGTSASDNIL 918
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G GND++ G ++ +G D G G DT + +
Sbjct: 919 GGAKDDKIAGGGGNDILRGKQGDDNLNGGTGRDQIGGGVGDDTL--SGGRGADTLSGYNG 976
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
I+ +E + + K L + L G D +
Sbjct: 977 EDILQGGSEADR-----------------LMGKKGHDRLFGGTGDDKLFGNNGNDRLDGG 1019
Query: 384 KHFYEFGLSEGRDITFDSYL 403
G D
Sbjct: 1020 ADNDTINGGAGDDTLIGGDG 1039
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 5/125 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ I GDD L TL G I + G + + +
Sbjct: 940 GDDNLNGGTGRDQIGGGVGDDTLSGGRGADTLSGYNGEDILQGGSEADRLMGKKGHDRLF 999
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
T + + G++GND + G + N+ +G+D G G DTF + S +I+ F
Sbjct: 1000 GGTGDDKLFGNNGNDRLDGGADNDTINGGAGDDTLIGGDGADTFVFAPNSGSDRIWDFAV 1059
Query: 324 AIIVY 328
+
Sbjct: 1060 GEDMI 1064
>gi|114652043|ref|XP_001157566.1| PREDICTED: matrix metalloproteinase 14 isoform 2 [Pan troglodytes]
Length = 545
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATYEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 167 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|114640113|ref|XP_001154004.1| PREDICTED: matrix metalloproteinase 3 isoform 2 [Pan troglodytes]
Length = 410
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 54/195 (27%), Gaps = 50/195 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 109 WRKTHLTYRIVNYTPDLPK-------DAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMI 161
Query: 73 ---TSIHSDIK-FISSNN--GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
H D F N + P + +FD + W GT L A H
Sbjct: 162 SFAVREHGDFYPFDGPGNVLAHAYAP--GPGINGDAHFDDDEQWTKDT-TGTNLFLVAAH 218
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
EIGH+LGL H S T + Y + F
Sbjct: 219 EIGHSLGLFH--------------------SANTEALMYPLYHSLTDLTRFRLSQ----D 254
Query: 187 DIVAVQKIYGAPKGS 201
DI +Q +YG P S
Sbjct: 255 DINGIQSLYGPPPDS 269
>gi|291520117|emb|CBK75338.1| hypothetical protein CIY_27760 [Butyrivibrio fibrisolvens 16/4]
Length = 178
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 6/111 (5%)
Query: 455 AFADAPDLVQVGKDHFSNFGCEE--GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 512
AF + H EE F++ Y Y D+ G+D H++
Sbjct: 22 AFTIDSSAASAVETHKRTLTVEELTALSTIFNAKEYAAYYPDVEQALGTDEKILFSHFVN 81
Query: 513 HGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
G+ E R P +F Y + + DL + D + A H++N E
Sbjct: 82 FGIWEQRQPSVSFNVDVYASRNADLQKLYGDD---IVAYYVHYANNKKTEA 129
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
F A EY A + D+ A ++ HF NFG E R + FN D+Y + DL
Sbjct: 50 TIFNAKEYAAYYPDVEQALGTDEKIL---FSHFVNFGIWEQRQPSVSFNVDVYASRNADL 106
Query: 580 WNVFGSDRSAAAQHYITHGMKE 601
++G D A HY + E
Sbjct: 107 QKLYGDDIVAYYVHYANNKKTE 128
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 538 NAFADAPDLVQAGKDHFSNFGYEE--GRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYI 595
AF A + H EE S FN Y Y D+ G+D H++
Sbjct: 21 TAFTIDSSAASAVETHKRTLTVEELTALSTIFNAKEYAAYYPDVEQALGTDEKILFSHFV 80
Query: 596 THGMKEGRALGIS 608
G+ E R +S
Sbjct: 81 NFGIWEQRQPSVS 93
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNV 414
+ EY A Y D+ Q +G D HF FG+ E R +F+ +Y DL+ +
Sbjct: 50 TIFNAKEYAAYYPDVEQALGTDEKILFSHFVNFGIWEQRQPSVSFNVDVYASRNADLQKL 109
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+G D A HY + E P
Sbjct: 110 YGDDIVAYYVHYANNKKTEAWRPLPVPTDA 139
Score = 44.4 bits (103), Expect = 0.066, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 6/122 (4%)
Query: 372 IQVIGQDVFES---MKHFYEFGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ D + H + E F++ Y Y D+ G+D H+
Sbjct: 20 VTAFTIDSSAASAVETHKRTLTVEELTALSTIFNAKEYAAYYPDVEQALGTDEKILFSHF 79
Query: 427 ITHGVKEGRNPD-AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
+ G+ E R P +F Y + + DL + D V + V D+
Sbjct: 80 VNFGIWEQRQPSVSFNVDVYASRNADLQKLYGDDIVAYYVHYANNKKTEAWRPLPVPTDA 139
Query: 486 YL 487
Sbjct: 140 LW 141
>gi|325982254|ref|YP_004294656.1| Hemolysin-type calcium-binding region [Nitrosomonas sp. AL212]
gi|325531773|gb|ADZ26494.1| Hemolysin-type calcium-binding region [Nitrosomonas sp. AL212]
Length = 1804
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/344 (13%), Positives = 89/344 (25%), Gaps = 56/344 (16%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+++ I T ++++G SGNDV+ G ++ GND G +G D+F
Sbjct: 1291 AFNGAAETNGLFNIIGGTGNDNIIGGSGNDVLTGGDGSDSITAGLGNDALSGGTGDDSFT 1350
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQ--------DFLSDVERLRFADQCIDSVNVKQRS 360
+ A S L D +S++E + A+ + +
Sbjct: 1351 FAAGSGLTSADSVNGGEGTDTVALTGNTAVAATNFDNVSNIEAITVANTTGAVAITTKDT 1410
Query: 361 ILEYTA--------------------------------SYEDLIQVIGQDVFESMKHFYE 388
++ A + + +G D
Sbjct: 1411 LVAAGAVLALQASSLTTGILTFNGAAETDGTFTITGGGGNDSITAGLGDDTLSGGAGNDT 1470
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+ +T + G+ D + G+ A+ + E I +
Sbjct: 1471 LRFAAVSGLTHADIVDGGTGTDTVALTGNTDFTASTDFDNVRNIEVITLGNTSTAVTITT 1530
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
+ L+ A A + G E D + N+ G +
Sbjct: 1531 QDALVAAGATLTLTNVANSGVLTFNGSAET-----DGAFTITGGTGSDNITGGAQNDTLA 1585
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L ++ + + AG D
Sbjct: 1586 -----------GGAGNDTLSGGTGNDSITSGAGTDSITGSAGAD 1618
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 68/582 (11%), Positives = 146/582 (25%), Gaps = 28/582 (4%)
Query: 25 NYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISS 84
+ + T + +I+ ++ A G S + + + ++ + SS
Sbjct: 807 ASNLTGTLIITTANATDNNISITTGSSATSVNVAAGAASDNISIDATALTNNTSLTITSS 866
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ GI + + EI G + N
Sbjct: 867 AAA-----AGSVSIVGLVGNLTVSNPTSGIISVAVTDNTIDDEITVVAGASNLIVSNVAN 921
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD---IVAVQKIYGAPKGS 201
+ + ++ + + T D A + A +
Sbjct: 922 GDTVTITGFTGSTLTGTIAGTTGKFNITAGTATNNMITGTGDDSFTFAAGSGLTSADSVN 981
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G + + + + + + + G ++ + G
Sbjct: 982 GGEGTDTVALTGNTAVAATNFDNVSNIEAITVANTTGAVAI--TTKDTLVAAGAVLALQA 1039
Query: 262 IAQHTVIESVVGSS---GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ T I + G++ G + G N+ G+D G +G DT + A S L
Sbjct: 1040 SSLTTGILTFNGAAETDGTFTITGGGGNDSITAGLGDDTLSGGAGNDTLRFAAVSGLTHA 1099
Query: 319 YRFENAI-IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
+ A DF + + + + ++ ++ T +
Sbjct: 1100 DIVDGGTGTDTVALTGNTDFTASTDFDNVRNIEVITLGNTSTAVTITTQDALVAVGATLT 1159
Query: 378 DVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
+ F S D F G D + G++ + + G
Sbjct: 1160 LTNAANSGVLTFNGSAETDGAFTITGGTG-NDLITAGSGNNTLSGGNGDDSFIFAAGTGL 1218
Query: 438 DA--------FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
+ + F + ++ + N +
Sbjct: 1219 TTDTVNGGTGTDTVTLTGTTVVTATQFNNVSNIEVIALPDMVNTAVTITTVNALVASGAT 1278
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
+ + N AA T+G+ + + ++ L
Sbjct: 1279 LTLSNAANSGILAFNGAAE---TNGLFNIIGGTGNDNIIGGSGNDVLTGGDGSDSITAGL 1335
Query: 550 GKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAA 591
G D + G S TF LTS D + G+D A
Sbjct: 1336 GND--ALSGGTGDDSFTFAAGSGLTSADSVNGGEGTDTVALT 1375
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 48/471 (10%), Positives = 99/471 (21%), Gaps = 71/471 (15%)
Query: 68 LTFEETSIHSDIKFISSNNGYVCTPRYDS-----RYFMEINFDKADVWRYGIGKGTILSH 122
+T + S SN ++ F I D G G +
Sbjct: 1266 ITTVNALVASGATLTLSNAANSGILAFNGAAETNGLFNIIGGTGNDNIIGGSGNDVLTGG 1325
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA-SFGYCA 181
+ I LG + + S LTS S + + A +
Sbjct: 1326 DGSDSITAGLG-----NDALSGGTGDDSFTFAAGSGLTSADSVNGGEGTDTVALTGNTAV 1380
Query: 182 TPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
D ++ T+ +G L + +
Sbjct: 1381 AATNFD----------NVSNIEAITVANTTGAVAITTKDTLVAAGAVLALQASSLTTGIL 1430
Query: 242 YIDLNTESWSSIGGYEK--NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ E+ + N +I +++ G +GND + + + D+ D
Sbjct: 1431 TFNGAAETDGTFTITGGGGNDSITAGLGDDTLSGGAGNDTLRFAA----VSGLTHADIVD 1486
Query: 300 GSSGLDTFFYYA--------------------------------------PSYLYKIYRF 321
G +G DT +
Sbjct: 1487 GGTGTDTVALTGNTDFTASTDFDNVRNIEVITLGNTSTAVTITTQDALVAAGATLTLTNV 1546
Query: 322 ENAIIVYDANEHKQDFL------SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
N+ ++ + D + + + Q L + +
Sbjct: 1547 ANSGVLTFNGSAETDGAFTITGGTGSDNITGGAQNDTLAGGAGNDTLSGGTGNDSITSGA 1606
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G D L S D + + +
Sbjct: 1607 GTDSITGSAGADTISLGSSVSDNIRQTTIYSSVSDGAAGGANSGADTIIQFDANANTATD 1666
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+ + +D N + + + G + D+
Sbjct: 1667 DLIRITDTFKSSLDDDNDNTLDYSVSNGTDADNQAISGGANREATILLDAE 1717
>gi|60207645|gb|AAX14806.1| collagenase [Notophthalmus viridescens]
Length = 469
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 57/188 (30%), Gaps = 30/188 (15%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + I Y+ T D+ + AL W+ V LTF +DI+
Sbjct: 108 WKHTEITYRILNYTPDMAKADVD-------AAIQRALNVWADVTPLTFTRLYEGTADIQI 160
Query: 82 ISS-----NNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ +N P + +FD+ + W G + L A HE
Sbjct: 161 SFAAGDHRDNSPFDGPDGLLAHAFEPGRGIGGDAHFDEDERWTKGSERYN-LFLMAAHEF 219
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYEN-----DSFLTSVMSYFMPQDSMMDASFGYCATP 183
GH+LGL H D + D Y ++ + TP
Sbjct: 220 GHSLGLSHSNDPGALMYPTYSSTDPDEFRLPQDDINGIQSLYGESKNPVQPTG---PTTP 276
Query: 184 MVSDIVAV 191
+ D +
Sbjct: 277 SICDTKVI 284
>gi|160773895|gb|AAI55488.1| LOC100127856 protein [Xenopus (Silurana) tropicalis]
Length = 559
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 76/274 (27%), Gaps = 73/274 (26%)
Query: 14 ADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPN-----AQEVARWALGEWSKVVDL 68
A L R L++ I ++ AL W V L
Sbjct: 118 AMRLPRCGKHEQRMSYNLGSKWKKDMLTYKILNTTAQLPEKMVKDELSKALKVWQDVSSL 177
Query: 69 TFEET--SIHSDIKFISSNN-----------------GYVCTPRYDS---RYFMEINFDK 106
F E + +DI + G+ P + +++ D
Sbjct: 178 KFVEVGINATADIDMFFVSGLHNDGIKNAFDGPGRVLGHAFMPPFSKNKKDIDGDLHLDN 237
Query: 107 ADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
+ W KG L A HE+GHALGL H + ++M+
Sbjct: 238 DEKWTINEKKGVNLLQAAAHELGHALGLDHS-------------------TVTGALMA-- 276
Query: 167 MPQDSMMDASFGYCATPMV--SDIVAVQKIYGA---PKGSLGNNI------YKIEVQQKD 215
GY + DI A+Q +YG + + N K +
Sbjct: 277 -------PTYKGYNPKFQLHEDDIQAIQALYGKPKLNQTTASNATVIKTGDVKTDTTSNT 329
Query: 216 SPFI-------QTIYDSGGDDLLDLTLIGGVKNY 242
P Q++ G + +D + +
Sbjct: 330 KPKAEDKDPKKQSVVKMCGQEPIDTFVSTKNGSI 363
>gi|114640107|ref|XP_508723.2| PREDICTED: stromelysin-1 isoform 4 [Pan troglodytes]
Length = 477
Score = 63.3 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 54/195 (27%), Gaps = 50/195 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 109 WRKTHLTYRIVNYTPDLPK-------DAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMI 161
Query: 73 ---TSIHSDIK-FISSNN--GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
H D F N + P + +FD + W GT L A H
Sbjct: 162 SFAVREHGDFYPFDGPGNVLAHAYAP--GPGINGDAHFDDDEQWTKDT-TGTNLFLVAAH 218
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
EIGH+LGL H S T + Y + F
Sbjct: 219 EIGHSLGLFH--------------------SANTEALMYPLYHSLTDLTRFRLSQ----D 254
Query: 187 DIVAVQKIYGAPKGS 201
DI +Q +YG P S
Sbjct: 255 DINGIQSLYGPPPDS 269
>gi|296216043|ref|XP_002807312.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-27-like
[Callithrix jacchus]
Length = 628
Score = 62.9 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 58/190 (30%), Gaps = 48/190 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W Y + Y+ T E + L WSKV LTF + S +DI
Sbjct: 106 WRKYNLTYRIINYTPDMA-------RAAVDEAIQEGLEVWSKVTPLTFTKISKGIADIMI 158
Query: 82 ISSNNGYVCTPRY--------------DSRYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ PRY + +FD+ + W G G L A HE
Sbjct: 159 AFRTRVHGRCPRYFDGPLGVLGHAFPPGPGLGGDTHFDEDENWTTD-GTGFSLFLVATHE 217
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GHALGL H V D Y + QD D
Sbjct: 218 FGHALGLSHSSDQTALMFPNYVSLDP---------RKYPLSQD----------------D 252
Query: 188 IVAVQKIYGA 197
I +Q IYG
Sbjct: 253 ISGIQSIYGG 262
>gi|62897629|dbj|BAD96754.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
Length = 390
Score = 62.9 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 54/185 (29%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 29 RWEQTHLTYRIENYTPDLPRADVD-------HAIEKAFQLWSNVTPLTFTKVSEGQADIM 81
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
N + C P + +FD+ + W + L A
Sbjct: 82 ISFVRGDHRDNSPFDGPGGNLAHACQP--GPGIGGDAHFDEDERWTNNF-REYNLHRVAA 138
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H + D D Y Q+ + T
Sbjct: 139 HELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIG---PQT 195
Query: 183 PMVSD 187
P D
Sbjct: 196 PKACD 200
>gi|221640609|ref|YP_002526871.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides
KD131]
gi|221161390|gb|ACM02370.1| Hemolysin-type calcium-binding region [Rhodobacter sphaeroides
KD131]
Length = 370
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 79/294 (26%), Gaps = 14/294 (4%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
D+ R G G + + G G + G D D
Sbjct: 7 GNDQLFGNGGNDLVRGGGGADILTGGTGNDLLAGGAGNDSLHGGTGANLLIGGAGDDLLD 66
Query: 157 SFLTSVM-SYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKD 215
S ++ + ++ A G D + G+ + +
Sbjct: 67 SRWSTDPDRGGLSFETWRAAKIGTGDEMHGGDGNDRIEASFGNDTLTGD---AGDDVIRG 123
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSS 275
+ G D L +G + E S+ G + + + ++G +
Sbjct: 124 QDGDDQLEGGEGQDTL----MGDAGVDVLSGGEGDDSLDGGLGDDRLDGGEGSDRLIGGN 179
Query: 276 GNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
GNDV+ G +A +V F G+D G D L + ++ + +
Sbjct: 180 GNDVMDGGAARDVLFGGYGDDRITAGEGDDWVDGGGGDDLIDLGAGDDFVAAIEDLGRGD 239
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
D + E + + ++ + L G D F
Sbjct: 240 DVIFGGE------GNDTMLGGRGCDQIDGGEGADVLNGGAGDDFLTGGAGADAF 287
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 75/301 (24%), Gaps = 18/301 (5%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + + V G G D++ G + N++ +GND G +G + +
Sbjct: 4 GLWGNDQLFGNGGNDLVRGGGGADILTGGTGNDLLAGGAGNDSLHGGTGANLLI--GGAG 61
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ + + + + + +E + + L
Sbjct: 62 DDLLDSRWSTDPDRGGLSFETWRAAKI------GTGDEMHGGDGNDRIEASFGNDTLTGD 115
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G DV + EG+D D L G D G
Sbjct: 116 AGDDVIRGQDGDDQLEGGEGQDTLMGDAGV----DVLSGGEGDDSLD-----GGLGDDRL 166
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ L ++ + A G D + ++ L D
Sbjct: 167 DGGEGSDRLIGGNGNDVMDGGAARDVLFGGYGDDRITAGEGDDWVDGGGGDDLIDLGAGD 226
Query: 495 LRNVFGSDRGAAARH-YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDH 553
D G + G ++ + L D AG D
Sbjct: 227 DFVAAIEDLGRGDDVIFGGEGNDTMLGGRGCDQIDGGEGADVLNGGAGDDFLTGGAGADA 286
Query: 554 F 554
F
Sbjct: 287 F 287
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 78/265 (29%), Gaps = 5/265 (1%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ GDDLLD + + L+ E+W + +
Sbjct: 43 GNDSLHGGTGANLLIGGAGDDLLD-SRWSTDPDRGGLSFETWRAAKIGTG-DEMHGGDGN 100
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + S GND + G++ ++V G+D +G G DT + + + E +
Sbjct: 101 DRIEASFGNDTLTGDAGDDVIRGQDGDDQLEGGEGQDTLM--GDAGVDVLSGGEGDDSLD 158
Query: 329 DA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + D +RL + R +L + + G D +
Sbjct: 159 GGLGDDRLDGGEGSDRLIGGNGNDVMDGGAARDVLFGGYGDDRITAGEGDDWVDGGGGDD 218
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
L G D D + G+D R EG + A +
Sbjct: 219 LIDLGAGDDFVAAIEDLGRGDDVIFGGEGNDTMLGGRGCDQIDGGEGADVLNGGAGDDFL 278
Query: 448 SHEDLINAFADAPDLVQVGKDHFSN 472
+ +AF FS+
Sbjct: 279 TGGAGADAFQMRSAHGIDTIADFSS 303
>gi|313241389|emb|CBY33659.1| unnamed protein product [Oikopleura dioica]
Length = 730
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/256 (16%), Positives = 64/256 (25%), Gaps = 61/256 (23%)
Query: 4 IKPVYTTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWS 63
KP + E + + W + + Y + + A EW
Sbjct: 274 GKPDFEPE---KYQIGGPAWRDNTVSYSMFSYSNDLPI-------EIQDDTVDKAFYEWE 323
Query: 64 KVVDLTFEE---TSIHSDIKFISSNN-----------------GYVCTPRYDSRYFMEIN 103
KV +L + IK + P Y + + +
Sbjct: 324 KVANLRPVNLGPAVDSAKIKISFGRGDHWDGYPFDGQHGTLAHAFFNDPGYPNDLEGDAH 383
Query: 104 FDKADVWRYGIGKGTILSH---NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLT 160
FD+ + W G G+ T A+HE GH+LGL H
Sbjct: 384 FDEDEFWTLGEGRITKAYSFFLVAVHEFGHSLGLGH------------------------ 419
Query: 161 SVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ 220
S F DI +Q +YG P G+
Sbjct: 420 ---SNNPEAVMYPSYHFTKKFEMPYDDIRGIQALYGPPTGTARPTTMTTSNDSLCDSDFD 476
Query: 221 TIYDSGGDDLLDLTLI 236
+I G +
Sbjct: 477 SILQW-GTETFIFKGR 491
>gi|323135542|ref|ZP_08070625.1| Methyltransferase type 11 [Methylocystis sp. ATCC 49242]
gi|322398633|gb|EFY01152.1| Methyltransferase type 11 [Methylocystis sp. ATCC 49242]
Length = 393
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 14/106 (13%)
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR------ 563
+ ++E D F Y+A++ D+ A V++G HF FG EGR
Sbjct: 5 FRATPLQESPTDDTFDEACYLAANPDVAEAVK--LGRVRSGWAHFKKFGRVEGRRQKVSD 62
Query: 564 -----SITFNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGR 603
+ F+ YL + D + A H+ G +GR
Sbjct: 63 EERATAENFDEKRYLAANRDARRALEEGKFASGRAHFENLGRLQGR 108
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 37/104 (35%), Gaps = 13/104 (12%)
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGR---------- 519
+ E TFD YL + D+ R + H+ G EGR
Sbjct: 7 ATPLQESPTDDTFDEACYLAANPDVAEAVKLGRVRSGWAHFKKFGRVEGRRQKVSDEERA 66
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ F Y+A++ D A +G+ HF N G +GR
Sbjct: 67 TAENFDEKRYLAANRDARRAL--EEGKFASGRAHFENLGRLQGR 108
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 14/107 (13%)
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR----- 479
+ ++E D F Y+A++ D+ A V+ G HF FG EGR
Sbjct: 4 PFRATPLQESPTDDTFDEACYLAANPDVAEAVK--LGRVRSGWAHFKKFGRVEGRRQKVS 61
Query: 480 ------FVTFDSYLYLGSYDDLRNVFGSD-RGAAARHYITHGVKEGR 519
FD YL + D R + H+ G +GR
Sbjct: 62 DEERATAENFDEKRYLAANRDARRALEEGKFASGRAHFENLGRLQGR 108
Score = 44.4 bits (103), Expect = 0.070, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 13/95 (13%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRG-AAARHYITHGVKEGR----------NPDAFKALE 444
D TFD YL + D+ R + H+ G EGR + F
Sbjct: 16 DDTFDEACYLAANPDVAEAVKLGRVRSGWAHFKKFGRVEGRRQKVSDEERATAENFDEKR 75
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR 479
Y+A++ D A + G+ HF N G +GR
Sbjct: 76 YLAANRDARRALEEG--KFASGRAHFENLGRLQGR 108
Score = 42.5 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 566 TFNPDLYLTSYDDLWNVFGSDR-SAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRD 624
TF+ YL + D+ R + H+ G EGR +S + + N EK
Sbjct: 18 TFDEACYLAANPDVAEAVKLGRVRSGWAHFKKFGRVEGRRQKVSDEERATAENFDEKRYL 77
Query: 625 KAD 627
A+
Sbjct: 78 AAN 80
>gi|127511248|ref|YP_001092445.1| putative outer membrane adhesin like proteiin [Shewanella loihica
PV-4]
gi|126636543|gb|ABO22186.1| putative outer membrane adhesin like proteiin [Shewanella loihica
PV-4]
Length = 1553
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 46/128 (35%), Gaps = 2/128 (1%)
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV 279
T G D +D + G + I G E N +I + ++G SG+D+
Sbjct: 1343 DTAVTVTGTDNVDNLIFGTTEGDSLTGANLDDEIYGREGNDSIFGLEGDDQLIGGSGDDL 1402
Query: 280 VIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G S N++ GND DG G D + I ++ I + D S
Sbjct: 1403 IEGGSGNDIILGGLGNDTIDGGIGADILI--GGAGSDTIDAGIDSDIDTFVWDVGSDDNS 1460
Query: 340 DVERLRFA 347
L F
Sbjct: 1461 IDTVLNFD 1468
>gi|62860164|ref|NP_001015921.1| matrix metallopeptidase 15 [Xenopus (Silurana) tropicalis]
gi|197246650|gb|AAI68432.1| matrix metallopeptidase 15 (membrane-inserted) [Xenopus (Silurana)
tropicalis]
gi|213626999|gb|AAI70564.1| matrix metallopeptidase 15 (membrane-inserted) [Xenopus (Silurana)
tropicalis]
gi|213627211|gb|AAI70917.1| matrix metallopeptidase 15 (membrane-inserted) [Xenopus (Silurana)
tropicalis]
Length = 648
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 52/190 (27%), Gaps = 35/190 (18%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS----- 74
+ W+ + Y + + + R A WSK LTF E
Sbjct: 126 GRKWNQQHLTYSIQNYSDKLGMHNS-------IDAIRKAFDVWSKATSLTFREVPYEAVR 178
Query: 75 ---IHSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGK 116
+DI + ++ + P + ++
Sbjct: 179 QRHSSADILILFASGFHGDSSPFDGPGGFLAHAYFPGPGMGGDAHFDSEEPWTVENMDLA 238
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE-----NDSFLTSVMSYFMPQDS 171
G L A+HE+GH+LGL H + + + D E D Y P D
Sbjct: 239 GNHLFLVAVHELGHSLGLEHSNNPSAIMAPFYQWMDTEDFQLPEDDRRGIQQLYGPPVDQ 298
Query: 172 MMDASFGYCA 181
+
Sbjct: 299 IPSTQSPLPT 308
>gi|291568896|dbj|BAI91168.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 223
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 11/170 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
PF + S +D++ G + L + + G E N T+
Sbjct: 17 GGNDGSITQPFPNQWFGSDNNDVII----GTASDETLLGFQGDDFLNGVEGNNTLFGGRG 72
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++V + +D+++GN +++ F +GND G G DT A ++ + I+
Sbjct: 73 NDTLVAGNADDILLGNKDDDLLFGGNGNDSLYGGQGNDTLI--AGDGNDILFGDKGNDIL 130
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
Y D L E + + + SI+ +D+I +IG
Sbjct: 131 Y-GGAKGTDTLVGGE----GNDTFVMLPGEGYSIVSDFDINQDIIVLIGN 175
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 36/133 (27%), Gaps = 29/133 (21%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ ++G++ ++ ++G ++ GN+ G G DT
Sbjct: 36 NNDVIIGTASDETLLGFQGDDFLNGVEGNNTLFGGRGNDTLV-------------AGNAD 82
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D L L + LI G D+ K
Sbjct: 83 DILLGNKDDDLL---------------FGGNGNDSLYGGQGNDTLIAGDGNDILFGDKGN 127
Query: 387 YE-FGLSEGRDIT 398
+G ++G D
Sbjct: 128 DILYGGAKGTDTL 140
>gi|307592192|ref|YP_003899783.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
gi|306985837|gb|ADN17717.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
Length = 1148
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 53/173 (30%), Gaps = 15/173 (8%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + + G E N +A + + G +G D + G + N+ D +G+SG D
Sbjct: 870 GSSKNNQLFGGEGNDKLAGSGGDDLLFGENGKDNLEGGTGNDFLAGGKDQDTLNGNSGND 929
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA---------------DQC 350
T Y A K+ + DA + + +VE +F D
Sbjct: 930 TASYAASDAGVKVKLSTGNGQLGDAEGDQLISIENVEGSQFNDDLEGDDQGNFLKGLDGD 989
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + + + + + G D EG D
Sbjct: 990 DNLSGKGGKDTIFGESGNDKIDGGKGGDEINGGDGQDILIGGEGSDTILGGQG 1042
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 50/176 (28%), Gaps = 13/176 (7%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH---TV 267
+ + D L+ +Y + + + A+
Sbjct: 902 DNLEGGTGNDFLAGGKDQDTLNGNSGNDTASYAASDAGVKVKLSTGNGQLGDAEGDQLIS 961
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
IE+V GS ND + G+ N G+D G G DT F S KI + +
Sbjct: 962 IENVEGSQFNDDLEGDDQGNFLKGLDGDDNLSGKGGKDTIF--GESGNDKIDGGKGGDEI 1019
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
QD L E + + +++ + G D+
Sbjct: 1020 --NGGDGQDILIGGE------GSDTILGGQGDDLIDPGNGINLINSGTGFDITTLG 1067
Score = 41.7 bits (96), Expect = 0.43, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 43/142 (30%), Gaps = 6/142 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + GDD L G I G + I
Sbjct: 970 FNDDLEGDDQGNFLKGLDGDDNL----SGKGGKDTIFGESGNDKIDGGKGGDEINGGDGQ 1025
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ ++G G+D ++G +++ +G ++ + +G D I
Sbjct: 1026 DILIGGEGSDTILGGQGDDLIDPGNGINLINSGTGFDITTLGNEGINNIILEVGEGFNTI 1085
Query: 329 DANEHKQDFL--SDVERLRFAD 348
+ K L S+V LRF D
Sbjct: 1086 ENFRLKTTNLGVSNVNTLRFQD 1107
Score = 39.8 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 84/295 (28%), Gaps = 16/295 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI-GGVKNYIDLNTESWSSIG 254
G + + + + G+D+L L G + I N S +
Sbjct: 264 GGGFNNDTLDGAGGDDIVIGGGASDVLSGGDGNDILLGDLFLGLINQTIIRNLGSITIAQ 323
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+++ ++ +G GND++ + N++ +GND +G + DT + +
Sbjct: 324 ADNTVISLGSISLAVGGIGGEGNDLINAGNGNDIVVGDNGNDTLNGENDNDTILGFGAND 383
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
L + I+ + + + L+ + + ++ + ++
Sbjct: 384 LITGSSGSDLILGDGISVDNVGGSAGSDILQGGSENDTLIGGGGGDLISGDDGNDVILGD 443
Query: 375 IGQDVFE---------------SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+ + + + + G D+ D +
Sbjct: 444 LFLGLIDTTLSANGIVLRVGGSGGEGSDILNGNNGDDVIIGDEGNDSISGDAGSDKVLGF 503
Query: 420 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
G + A+ D+++A LV G N G
Sbjct: 504 GGSDFVSGGSEDDILLGDGFSADPVGGAAGRDVLDAGEGDDILVGGGSGDTLNGG 558
>gi|163742734|ref|ZP_02150119.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
2.10]
gi|161383989|gb|EDQ08373.1| Hemolysin-type calcium-binding region [Phaeobacter gallaeciensis
2.10]
Length = 414
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/308 (13%), Positives = 81/308 (26%), Gaps = 37/308 (12%)
Query: 202 LGNNIYKIEVQQKDSPFIQTI----YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
G +I SP+ TI +SGG + ++ ++ +
Sbjct: 42 TGTSITLTGDFSSSSPYFWTIESMAVNSGGTPVYAISEFSMNFYRFSASSGAALEAAILT 101
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ TI ++ + + ++V G+D G G D +
Sbjct: 102 GDDTITS-----NMAEGTRW---LAYGGDDVISLGIGDDYVHGGYGTDRLIIHDTYGRAD 153
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQC-----------------------IDSV 354
I V+ + +D L +E+L+F+++ +
Sbjct: 154 ISSVYGG--VWIDSADGRDTLLSIEQLQFSNRSFSLSVDTSSSTSMSGDRDNTLTSDIML 211
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
L + + L+ G D + +G DI DL
Sbjct: 212 GGLGADTLAGLSGRDMLLGEEGNDHLMGGEGHDTLKGGDGHDILLGGSGRDWLAGDLGED 271
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
S + G R D L + + L+ + G+D
Sbjct: 272 AISGGSHGDKLIGGGGHDTLRGQDGHDVLRGNSGWDQLLGGRGNDRIYGDGGQDRLIGQE 331
Query: 475 CEEGRFVT 482
+
Sbjct: 332 GNDTLTGG 339
Score = 57.9 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 12/162 (7%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
K + G D L + + GG + ++ G + + +
Sbjct: 242 GHDTLKGGDGHDILLGGSGRDWLAGDLGEDAISGGSHGDKLIGGGGHDTLRGQDGHDVLR 301
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++ + ++G GND + G+ + GND G + DTF ++ I F
Sbjct: 302 GNSGWDQLLGGRGNDRIYGDGGQDRLIGQEGNDTLTGGAHADTFVFHRGYGTDIITDFTV 361
Query: 324 AI--IVYDANEHKQDFLS-----DVERLRFADQCIDSVNVKQ 358
I D L+ + ++ FAD I N
Sbjct: 362 GEDRIQIGRGADGTDDLTFTSQGNSVQITFADVTIMVENSTL 403
>gi|152995878|ref|YP_001340713.1| hemolysin-type calcium-binding region [Marinomonas sp. MWYL1]
gi|150836802|gb|ABR70778.1| Hemolysin-type calcium-binding region [Marinomonas sp. MWYL1]
Length = 5171
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/271 (13%), Positives = 70/271 (25%), Gaps = 26/271 (9%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ +S+ ++ + DV G I + + G
Sbjct: 4871 DGTQNNLDTSDLWKPNAIEGNNDNNTIFSGSDNDVVHGNGGNDLISGESGNDTLYGGDGN 4930
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
H + +YG D S S Y + + ++
Sbjct: 4931 DHILGGSQDDILYGEAGDDWLQSDSGSNKMYGGSGNDKLQGGGN------------EDEL 4978
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
YG + ++ G+D LD GG + + + +
Sbjct: 4979 YGEE----------GNDLLYGNASNDKLFGGSGNDYLD----GGENDDLLDGGDGDDVLY 5024
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G ++ + + G +G+D + G N+ +G D G G DTF
Sbjct: 5025 GQGGADNLSGGAGNDYLSGGAGSDTLSGGVGNDYLSGGAGQDSLTGGEGADTFVIDFAES 5084
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
N+ D + +
Sbjct: 5085 AVDSLTDFNSATDVLDISDLLDVPDGTDDIS 5115
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 49/348 (14%), Positives = 103/348 (29%), Gaps = 28/348 (8%)
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G V +D++ D+ + + + S+ + +S +A +
Sbjct: 4764 NGNVVASIDSNQSVDTDIFTFTVTDSGKQSIEIIYWDQGGDYQLSVFLA--ESNSDNYQV 4821
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
LG + Y D+ T D+ ++ + DLN + G + N+
Sbjct: 4822 LGGDAYPTSFTATDANEPDTSEDATSNNWSSEDELNAAHTD-DLNQYG--KVDGTQNNLD 4878
Query: 262 IAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ + + + N+ + S N+V + GND+ G SG DT +
Sbjct: 4879 TS-DLWKPNAIEGNNDNNTIFSGSDNDVVHGNGGNDLISGESGNDTLY-----------G 4926
Query: 321 FENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+ + ++ + + + L+ L+ + ++L G D+
Sbjct: 4927 GDGNDHILGGSQDDILYGEAGDDWLQSDSGSNKMYGGSGNDKLQGGGNEDELYGEEGNDL 4986
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ G D YL ++ + G D Y G
Sbjct: 4987 LYGNASNDKLFGGSGND-------YLDGGENDDLLDGGDGDDVL--YGQGGADNLSGGAG 5037
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYL 487
L A + L + G+D + + + F
Sbjct: 5038 NDYLSGGAGSDTLSGGVGNDYLSGGAGQDSLTGGEGADTFVIDFAESA 5085
Score = 43.2 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 65/432 (15%), Positives = 115/432 (26%), Gaps = 23/432 (5%)
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
N G + + V + + D G + D A K K
Sbjct: 4669 GNLGTIALAESVIANQSANASFVSTEVDYTRASGDLGKGSNLESWLGDDSASIKYVDNNK 4728
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
S +++ K+ + +I + DD + + G V ID N + I +
Sbjct: 4729 QSTEDSVVKLTGFVSLAVGSYSIKVTA-DDGYQIKINGNVVASIDSNQSVDTDIFTFT-- 4785
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+T + IE + G D + +S N G T F +
Sbjct: 4786 VTDSGKQSIEIIYWDQGGDYQLSVFLA---ESNSDNYQVLGGDAYPTSFTATDANEPDTS 4842
Query: 320 R---FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
N + N D L+ ++ +D+ ++ + + +E +
Sbjct: 4843 EDATSNNWSSEDELNAAHTDDLNQYGKVDGTQNNLDTSDLWKPNAIEGNNDNNTIFSGSD 4902
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
DV G D Y G +D D Y G ++
Sbjct: 4903 NDVVHGNGGNDLISGESGNDTL-----YGGDGNDHILGGSQDDIL----YGEAGDDWLQS 4953
Query: 437 PDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
Y S D + + +L + + YL ++
Sbjct: 4954 DSG-SNKMYGGSGNDKLQGGGNEDELYGEEGNDLLYGNASNDKLFGGSGNDYLDGGENDD 5012
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSN 556
+ G D Y G L A + L + AG+D S
Sbjct: 5013 LLDGGDGDDVL--YGQGGADNLSGGAGNDYLSGGAGSDTLSGGVGNDYLSGGAGQD--SL 5068
Query: 557 FGYEEGRSITFN 568
G E + +
Sbjct: 5069 TGGEGADTFVID 5080
>gi|26354408|dbj|BAC40832.1| unnamed protein product [Mus musculus]
Length = 339
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 54/157 (34%), Gaps = 29/157 (18%)
Query: 35 LTTHRLSFDITELNPNAQE-----VARWALGEWSKVVDLTFE-----ET------SIHSD 78
L++ I P+ + + + A WS V L F E + +
Sbjct: 113 WMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRKLHKDEADIMILFAFGAH 172
Query: 79 IKFI-----SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
F + P + +FD+A+ W +GT L A+HE+GH+LG
Sbjct: 173 GDFNYFDGKGGTLAHAFYP--GPGIQGDAHFDEAETWTKSF-QGTNLFLVAVHELGHSLG 229
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQD 170
L H P + Y + T +S ++
Sbjct: 230 LQHS-----NNPKSIMYPTYRYLNPSTFRLSADDIRN 261
>gi|5771541|dbj|BAA83518.1| matrilysin [Sus scrofa]
Length = 267
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 61/194 (31%), Gaps = 50/194 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W++ + Y+ T + +L AL WS + L+F++ S +DI
Sbjct: 104 WTSKIVTYRIVSYTRDLPHVTVNQL-------VTKALKMWSNEIPLSFKKVSWGIADIII 156
Query: 82 IS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ + P + +FD+ + W G G + A H
Sbjct: 157 GFARGAHGDAYPFDGPGNTLAHAFAP--GPGLGGDAHFDEDEHWSDGGSIGINFLYAATH 214
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H N VM + D
Sbjct: 215 ELGHSLGLAHSSDPNA-------------------VMYPTYGEVYSKDFK------LSQD 249
Query: 187 DIVAVQKIYGAPKG 200
DI +QK+YG
Sbjct: 250 DINGIQKLYGKRSN 263
>gi|330943692|gb|EGH45988.1| calcium binding hemolysin protein [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 438
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 78/293 (26%), Gaps = 61/293 (20%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D TL+G + + +I G + +S+ G GNDV+ G + ++
Sbjct: 127 DDTLVGYDTDDVLKGLAGNDNISGRAGADILDGGAGKDSLYGDEGNDVLRGEADDDTLNG 186
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS------------ 339
G+D+ DG +G D+ + S Y + + ++ +
Sbjct: 187 GIGDDLLDGGAGNDSLAGGSGSDTYVFRKGSGQDTINNSVYNDTTANKLDVIKLDGLNLS 246
Query: 340 ------------------------------------DVERLRFADQ---------CIDSV 354
+++L+F+D +
Sbjct: 247 DISLRRESDDLIIEIKETGEILRVTQHFNASLISGYAIDQLQFSDGSFLTTDQIRTALLI 306
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
I+ S + L G D EG+D+ D L
Sbjct: 307 GTVGDDIIFGYDSADVLKGASGNDTLSGRAGNDALLGGEGKDMLNGEDG----NDILDGG 362
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
G+D T+ + G D Y + + ++
Sbjct: 363 AGNDTLNGGYGSDTYVFRRGAGQDTVNNYAYNDTTPNKLDVVKLEGLNPADVL 415
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 50/345 (14%), Positives = 94/345 (27%), Gaps = 31/345 (8%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES-------VVGSSGNDVV 280
DDL+ G + + + + G + A T++++ + G+ +D +
Sbjct: 71 DDLILQIKETGDTLRVTSHFSASAISGYAIDQLQFADGTLMDNSQIKLALLGGTEDDDTL 130
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+G ++V +GND G +G D + +Y E ++ +
Sbjct: 131 VGYDTDDVLKGLAGNDNISGRAGADIL--DGGAGKDSLYGDEGNDVLRGEADDDT----- 183
Query: 341 VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV--FESMKHFYEFGLSEGRDIT 398
+L+ A + L G D F S D T
Sbjct: 184 ------------LNGGIGDDLLDGGAGNDSLAGGSGSDTYVFRKGSGQDTINNSVYNDTT 231
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+ + + R + E I+ + F+D
Sbjct: 232 ANKLDVIKLDGLNLSDISLRRESDDLIIEIKETGEILRVTQHFNASLISGYAIDQLQFSD 291
Query: 459 APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
L G G + F N S R G
Sbjct: 292 GSFLTTDQIRTALLIGTV-GDDIIFGYDSADVLKGASGNDTLSGRAGNDALLGGEGKDML 350
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDL--VQAGKDHFSNFGYEE 561
D L+ A ++ L + + AG+D +N+ Y +
Sbjct: 351 NGEDGNDILDGGAGNDTLNGGYGSDTYVFRRGAGQDTVNNYAYND 395
Score = 46.3 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 58/232 (25%), Gaps = 62/232 (26%)
Query: 281 IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII-------------- 326
+ N+ GND G G D + + + I
Sbjct: 1 MAGYGNDSLDGGLGNDSLSGGVGSDIYVFRKGAGQDTINNSAYNDTTVGKLDVIRFEGLN 60
Query: 327 -------------------------VYDANEHKQDFLSDVERLRFADQCIDS-------- 353
V +++L+FAD +
Sbjct: 61 AEDISIRRESDDLILQIKETGDTLRVTSHFSASAISGYAIDQLQFADGTLMDNSQIKLAL 120
Query: 354 ----------VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF---- 399
V +L+ A +++ G D+ + EG D+
Sbjct: 121 LGGTEDDDTLVGYDTDDVLKGLAGNDNISGRAGADILDGGAGKDSLYGDEGNDVLRGEAD 180
Query: 400 DSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
D L G DDL + G+D A T+ ++G D Y +
Sbjct: 181 DDTLNGGIGDDLLDGGAGNDSLAGGSGSDTYVFRKGSGQDTINNSVYNDTTA 232
>gi|146343791|ref|YP_001208839.1| hemolysin-type calcium-binding repeat-containing protein
[Bradyrhizobium sp. ORS278]
gi|146196597|emb|CAL80624.1| hypothetical protein; putative Hemolysin-type calcium-binding
repeats [Bradyrhizobium sp. ORS278]
Length = 522
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/301 (14%), Positives = 85/301 (28%), Gaps = 31/301 (10%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN-SANNVFFESSG 294
G N + +N + ++ N TI +++ +GNDV++ S ++ SG
Sbjct: 126 TGNGDNQVFVNDSAAVTVLTGSGNDTIYAGAGADTLSSGAGNDVLVDQVSGASLLDGGSG 185
Query: 295 NDVFD--------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ----DFLSDVE 342
D+ G G DT + S + I+ ++ D +D +
Sbjct: 186 YDLLFGSGADKLAGGDGDDTLYGGTASD---LLGGNGNDILISGSDAVHANVLDGGADSD 242
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD-- 400
+L IL + ++ + D+ G D +
Sbjct: 243 QLYAGAGQDSLYGGAGSDILVFGSAAQYADGDDDNDLVVGGAGNDALHGGNGNDAIYSNS 302
Query: 401 -----SYLYLGSYDDLRNV--------FGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
+ LY S +D G+D T + G D + +
Sbjct: 303 VASQGAKLYGDSGNDSLYAGAGADSLCGGADADLLIGGAATAVLDGGGGDDVVYSNSNSS 362
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ + G D + + + + + D + F D G
Sbjct: 363 QGTVVYGGGGNDQLYAGYGNDTLYGGSGHDLLKAGYGNGVTVMIGGDDGSSFTDDTGGNT 422
Query: 508 R 508
Sbjct: 423 S 423
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 67/256 (26%), Gaps = 9/256 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ G+D+L N +D +S + ++
Sbjct: 200 GDGDDTLYGGTASDLLGGNGNDILISGSDAVHANVLDGGADS-DQLYAGAGQDSLYGGAG 258
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-YKIYRFENAII 326
+ +V S G+ N++ +GND G +G D + + + K+Y
Sbjct: 259 SDILVFGSAAQYADGDDDNDLVVGGAGNDALHGGNGNDAIYSNSVASQGAKLYGDSGNDS 318
Query: 327 VY-DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE---DLIQVIGQDVFES 382
+Y A +D + L ++ ++ + G D +
Sbjct: 319 LYAGAGADSLCGGADADLLIGGAATAVLDGGGGDDVVYSNSNSSQGTVVYGGGGNDQLYA 378
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKA 442
G D+ G+ + G F
Sbjct: 379 GYGNDTLYGGSGHDLL---KAGYGNGVTVMIGGDDGSSFTDDTGGNTSSMVGGAGQDFFY 435
Query: 443 LEYIASHEDLINAFAD 458
L+ + + + + D
Sbjct: 436 LKNLFTPDTIDGGGGD 451
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/295 (15%), Positives = 75/295 (25%), Gaps = 22/295 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
G+ N V + +SA SGND +G DT + + A ++
Sbjct: 125 ATGNGDNQVFVNDSAAVTVLTGSGNDTIYAGAGADTL-SSGAGNDVLVDQVSGASLLDGG 183
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS-----------YEDLIQVIGQDV 379
+ + F S ++L D +L + L D
Sbjct: 184 SGYDLLFGSGADKLAGGDGDDTLYGGTASDLLGGNGNDILISGSDAVHANVLDGGADSDQ 243
Query: 380 FESMKHFYEFGLSEGRDITF--DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 437
+ G DI + Y DD V G A + +
Sbjct: 244 LYAGAGQDSLYGGAGSDILVFGSAAQYADGDDDNDLVVGGAGNDALHGGNGNDAIYSNSV 303
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ A Y S D + A A A L G D
Sbjct: 304 ASQGAKLYGDSGNDSLYAGAGADSLCGGADADLLIGGAATAVLDG--------GGGDDVV 355
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
S+ Y G + L + H+ L + + ++ G D
Sbjct: 356 YSNSNSSQGTVVYGGGGNDQLYAGYGNDTLYGGSGHDLLKAGYGNGVTVMIGGDD 410
>gi|73962349|ref|XP_856947.1| PREDICTED: similar to matrix metalloproteinase 14 preproprotein
isoform 2 [Canis familiaris]
Length = 582
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 113 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 165
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 166 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 225
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 226 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 267
>gi|15223067|ref|NP_177174.1| MMP (MATRIX METALLOPROTEINASE); metalloendopeptidase/
metallopeptidase [Arabidopsis thaliana]
gi|2194124|gb|AAB61099.1| Similar to Glycine metalloendoproteinase (gb|U63725) [Arabidopsis
thaliana]
gi|332196906|gb|AEE35027.1| matrix metalloproteinase [Arabidopsis thaliana]
Length = 378
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 56/220 (25%), Gaps = 54/220 (24%)
Query: 46 ELNPNAQEVARWALGEWSKVVDLTFE--ETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN 103
L + V A G WS V L F E+ SDI + +D +
Sbjct: 180 PLTEEVKSVFSRAFGRWSDVTALNFTLSESFSTSDITIGFYTGDHGDGEPFDGVLGTLAH 239
Query: 104 F----------DKADVWRYGIGKGTILSHN--------ALHEIGHALGLMHPGSYNGGYP 145
D + W + LS A+HEIGH LGL H
Sbjct: 240 AFSPPSGKFHLDADENWVVSGDLDSFLSVTAAVDLESVAVHEIGHLLGLGHS-------- 291
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
S S+M + D+ +Q +YGA
Sbjct: 292 -----------SVEESIMY-------PTITTGKRKVDLTNDDVEGIQYLYGANPN----- 328
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ D+GG + L
Sbjct: 329 ---FNGTTSPPSTTKHQRDTGGFSAAWRIDGSSRSTIVSL 365
>gi|330877260|gb|EGH11409.1| Poly(beta-D-mannuronate) C5 epimerase 3 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 238
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 60/184 (32%), Gaps = 7/184 (3%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V+ +G GN+ +N+ + +G++V DG G DT Y + + +A
Sbjct: 16 VITGTGAANATGNTLDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTSAQQATGG 75
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ D L E L + K ++L + + L +G DV
Sbjct: 76 S--GLDTLKGTENLTGSQFADTLTGNKNANVLNGGSGNDTLSGGVGDDVLIGGSGADTLI 133
Query: 391 LSEGRD---ITFDSYLYLGSYDDLRNVF--GSDRGAAARHYITHGVKEGRNPDAFKALEY 445
G D + LG D+ N F + + + + F
Sbjct: 134 GGTGADRYVFNNSNETGLGGLRDIINGFKAAEGDKLDFTGFDARSLTDAHDAFVFIGNAA 193
Query: 446 IASH 449
+++
Sbjct: 194 FSAN 197
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 53/166 (31%), Gaps = 5/166 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH-- 265
+ IY GD+++D +Y+ ++ + T
Sbjct: 20 TGAANATGNTLDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTSAQQATGGSGLD 79
Query: 266 --TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
E++ GS D + GN NV SGND G G D + + +
Sbjct: 80 TLKGTENLTGSQFADTLTGNKNANVLNGGSGNDTLSGGVGDDVLIGGSGADTLIGGTGAD 139
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
+ ++NE L D+ F D ++ T +++
Sbjct: 140 RYVFNNSNETGLGGLRDI-INGFKAAEGDKLDFTGFDARSLTDAHD 184
>gi|47168806|pdb|1RM8|A Chain A, Crystal Structure Of The Catalytic Domain Of Mmp-16MT3-
Mmp: Characterization Of Mt-Mmp Specific Features
Length = 169
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 48/159 (30%), Gaps = 30/159 (18%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS-- 77
Q W + I Y +T +P ++ R A W V LTFEE
Sbjct: 1 GQKWQHKHITYSIKNVTPKVG-------DPETRKAIRRAFDVWQNVTPLTFEEVPYSELE 53
Query: 78 ------DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGK 116
DI I ++ + P + D+
Sbjct: 54 NGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHD 113
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G L A+HE+GHALGL H + + +N
Sbjct: 114 GNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN 152
>gi|255263377|ref|ZP_05342719.1| hemolysin-type calcium-binding region [Thalassiobium sp. R2A62]
gi|255105712|gb|EET48386.1| hemolysin-type calcium-binding region [Thalassiobium sp. R2A62]
Length = 478
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/320 (13%), Positives = 76/320 (23%), Gaps = 16/320 (5%)
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK--IE 210
D+ S ++ D++ Y A+ ++ K + IY
Sbjct: 86 SSEDAPWYSASNFLGTSIMTADSAVTYQASSADDYVLGTAKANELISYDGNDLIYGMGGN 145
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
K I GG DL+ GG ++ + N + +
Sbjct: 146 DILKGGEGADVIAGGGGRDLI----HGGNGEDTINGGLGNDTVFAGDDNDYVDGDDGNDL 201
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +G+D +IG + + ND G D IY E +Y
Sbjct: 202 IYGHNGDDTLIGGLGKDEIYGGDSNDALSGGEDNDIL--KGGDGEDIIYGDEGRDGLYGN 259
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + + L + L D
Sbjct: 260 DGADV--------MNGGLGNDELFGGTGEDNLVGGEGNDYLFGGDDNDTVHGGNGSDRMQ 311
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
+ G D + N F + G + L A +
Sbjct: 312 GNNGDDWIYGDASIDKMAGGYGNDFMHGGADNDKLNGNSGDDTLDGGARYDKLYGGACDD 371
Query: 451 DLINAFADAPDLVQVGKDHF 470
L +G D F
Sbjct: 372 TLNAGEGIDQLSGGIGSDTF 391
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/308 (12%), Positives = 72/308 (23%), Gaps = 67/308 (21%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L T + + Y+ N I + + G G DV+ G ++ +G D +G G
Sbjct: 122 LGTAKANELISYDGNDLIYGMGGNDILKGGEGADVIAGGGGRDLIHGGNGEDTINGGLGN 181
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT F + + + + + + +
Sbjct: 182 DTVFAGDDNDYVDGDDGND-------------------LIYGHNGDDTLIGGLGKDEIYG 222
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
S + L D+ + EGRD LY D+ N +
Sbjct: 223 GDSNDALSGGEDNDILKGGDGEDIIYGDEGRD-----GLYGNDGADVMNGGLGNDEL--- 274
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
+ G + L ++ + G D
Sbjct: 275 -FGGTGEDNLVGGEGNDYLFGGDDNDTVHGGNGSDRMQGNNG-----------------D 316
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
++Y + D + A ++ L D
Sbjct: 317 DWIYGDASIDKMAGGY----------------------GNDFMHGGADNDKLNGNSGDDT 354
Query: 545 DLVQAGKD 552
A D
Sbjct: 355 LDGGARYD 362
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/251 (14%), Positives = 70/251 (27%), Gaps = 12/251 (4%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
+ + D G+G T+ + + + G +NG + G
Sbjct: 154 ADVIAGGGGRDLIHGGNGEDTINGGLGNDTVFAGDDNDYVDGDDGNDLIYGHNGDDTLIG 213
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
E ++ + ++ G ++ +YG + N
Sbjct: 214 GLGKDEIYGGDSNDALSGGEDNDILKGGDG---EDIIYGDEGRDGLYGNDGADVMNGGLG 270
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G+D L GG N + G + I I
Sbjct: 271 -NDELFGGTGEDNLVGGEGNDYL----FGGDDNDTVHGGNGSDRMQGNNGDDWIYGDASI 325
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G GND + G + N+ +SG+D DG + D + I
Sbjct: 326 DKMAGGYGNDFMHGGADNDKLNGNSGDDTLDGGARYDKLY----GGACDDTLNAGEGIDQ 381
Query: 329 DANEHKQDFLS 339
+ D S
Sbjct: 382 LSGGIGSDTFS 392
Score = 42.9 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 25/237 (10%), Positives = 52/237 (21%), Gaps = 12/237 (5%)
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
Y F I+ + S + + + + ++ ++ + L
Sbjct: 93 YSASNFLGTSIMTADSAVTYQASSADDYVLGTAKANELISYDGNDLIYGMGGNDILKGGE 152
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G DV G D + N + Y +G
Sbjct: 153 GADVIAGGGGRDLIHGGNGEDTINGGLGNDTVFAGDDNDYVDGDDGNDLIYGHNGDDTLI 212
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
+ S++ L + G+D +G Y D+
Sbjct: 213 GGLGKDEIYGGDSNDALSGGEDNDILKGGDGEDIIYGDEGRDGL--------YGNDGADV 264
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
N + + G + L ++ + G D
Sbjct: 265 MNGGLGNDEL----FGGTGEDNLVGGEGNDYLFGGDDNDTVHGGNGSDRMQGNNGDD 317
>gi|110678501|ref|YP_681508.1| type I secretion target repeat-containing protein [Roseobacter
denitrificans OCh 114]
gi|109454617|gb|ABG30822.1| type I secretion target repeat protein [Roseobacter denitrificans
OCh 114]
Length = 544
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/381 (14%), Positives = 84/381 (22%), Gaps = 34/381 (8%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD----------LLDLTLIGGVKNYIDLNTE 248
S TI+ G+D LD N +
Sbjct: 81 STGSDTIFLGDGDDTATSSGTDTIFGGAGNDLIFSGLGLPETLDGGNGIDTLNTTSFSGS 140
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ N T E+++ SG+D + G S N+ GND G G DT
Sbjct: 141 YVVNLATGLTNFAGEVFTNFENIISGSGSDELFGTSGVNIMEGGDGNDRILGLEGSDTLR 200
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASY 368
+ I+ RL + + +L
Sbjct: 201 --GGGGNDVLNGGLGNDILRGDANED--------RLFGREGDDNLDGGSGDDLLVGNEGN 250
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
+ L G D +G D F +
Sbjct: 251 DILNGSGGDDFIRGQAGVDFINGGDGNDEAFGGDGNDTMRGGEGDDLLDGSAGNDFIDGE 310
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY 488
G L ++L + + G D E+ F
Sbjct: 311 DGNDVLVGQIGNDTLLGGDGSDELRGGGGNDFLNGENGNDTLFGGANEDTLFGGSGDDFL 370
Query: 489 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
G+ D + G D F L+ + L +
Sbjct: 371 QGNQQD------------DDLFGQSGNDRLFGGDGFDFLDGGIGDDRLEGNNGRDTLVGG 418
Query: 549 AGKDHFSNFGYEEGRSITFNP 569
G D G G + FN
Sbjct: 419 TGAD--ILIGGALGDTFRFNS 437
Score = 42.5 bits (98), Expect = 0.21, Method: Composition-based stats.
Identities = 32/276 (11%), Positives = 70/276 (25%), Gaps = 10/276 (3%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI-- 128
D T R + D+ R + + +
Sbjct: 178 VNIMEGGDGNDRILGLEGSDTLRGGGGNDVLNGGLGNDILRGDANEDRLFGREGDDNLDG 237
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
G L+ N G D+ + + + ++ D+
Sbjct: 238 GSGDDLLVGNEGNDILNGSGGDDFIRGQAGVDFINGGDGNDEAFGGDGNDTMRGGEGDDL 297
Query: 189 VAVQKIYGAPKGSLGNNIYKI---EVQQKDSPFIQTIYDSGGDDLLDLTL-----IGGVK 240
+ G GN++ + GG+D L+ GG
Sbjct: 298 LDGSAGNDFIDGEDGNDVLVGQIGNDTLLGGDGSDELRGGGGNDFLNGENGNDTLFGGAN 357
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
+ G +++ + + + + G G D + G ++ ++G D G
Sbjct: 358 EDTLFGGSGDDFLQGNQQDDDLFGQSGNDRLFGGDGFDFLDGGIGDDRLEGNNGRDTLVG 417
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+G D A ++ ++ + D
Sbjct: 418 GTGADILIGGALGDTFRFNSVADSNLASRDTIVGID 453
>gi|56750275|ref|YP_170976.1| S-layer-RTX protein [Synechococcus elongatus PCC 6301]
gi|56685234|dbj|BAD78456.1| similar to S-layer-RTX protein [Synechococcus elongatus PCC 6301]
Length = 610
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/452 (12%), Positives = 127/452 (28%), Gaps = 24/452 (5%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
F ++NG + D+ Y D + + K + + + + L +
Sbjct: 69 FTLNSNGSYSFDQDDTSYDSLGLGDTQVIAIDYVVKDSRGAVSQTRTLSINLAGTNDAPT 128
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ-KIYGAPK 199
PV ++ + S + + +P S I A+ ++G
Sbjct: 129 ITAGPVVDANSITFTAEDIDSDTLTARVGTTNLMPGTVNNGSPTTSTITALDTALFGELN 188
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-------DLTLIGGVKNYIDLNTESWSS 252
G + + + + G + D L G ++ L + +
Sbjct: 189 VFDGTDSVGVGLFVGIGTIGADTLTAIGTNPAVLYGFEGDDRLTGADQDDTILGGDGNDT 248
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I N I + +S+VG + +D + G + + G D DG G D+ F +
Sbjct: 249 IIEISGNNLIEGNNNNDSIVGGTDSDRINGGAGADTILGGDGADTIDGGLGNDSIFGDSG 308
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE--- 369
+ + + N I+ N+ + ++ + + + S L +
Sbjct: 309 NDNIRGFGDSNTILGGSGNDTIEGTIAGSNSIDGGENDDVITEIGFGSTLLGGLGNDSIL 368
Query: 370 -----DLIQVIGQDVFESMKHFYEFGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRG 420
+ G D G D S+ GS + + G+D
Sbjct: 369 GFSASTINGGDGSDTINVEFGNNTIDGGMGNDSIEIAINPSFTISGSGNTVSGSNGNDTI 428
Query: 421 AAARHY----ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
A + + + L D + E
Sbjct: 429 IAINGSNLIEGNNDNDSIVGGTDSDTINGGTGADTLTGGLGSDTFSFAATGDGIAATSGE 488
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
G + + Y+ ++ + ++ G +
Sbjct: 489 NGSVTFGNGFDYITDFESIDSIIVGTDGFTIQ 520
Score = 59.8 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/314 (13%), Positives = 94/314 (29%), Gaps = 10/314 (3%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ + AD G G TI I G + + + G
Sbjct: 265 DSIVGGTDSDRINGGAGADTILGGDGADTIDGGLGNDSIFGDSGNDNIRGFGDSNTILGG 324
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ + + S ++ + G+ +T + + A + G+
Sbjct: 325 SGNDTIEGTIAGSNSIDGGENDDVITEIGFGSTLLGGLGNDSILGFSASTINGGD----G 380
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
TI G+D +++ + + S +++ G N TI
Sbjct: 381 SDTINVEFGNNTIDGGMGNDSIEIAINPSFTI-----SGSGNTVSGSNGNDTIIAINGSN 435
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G++ ND ++G + ++ +G D G G DTF + A EN + +
Sbjct: 436 LIEGNNDNDSIVGGTDSDTINGGTGADTLTGGLGSDTFSFAATGDGIAATSGENGSVTFG 495
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
++ + + + ++ +Y + + D+F ++
Sbjct: 496 NGFDYITDFESIDSIIVGTDGFTIQSSVGTAFIDGDGNYVIVSVGMISDIF-AIAGVLTD 554
Query: 390 GLSEGRDITFDSYL 403
E RD
Sbjct: 555 TTFESRDPGMGDSF 568
Score = 42.9 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 28/297 (9%), Positives = 68/297 (22%), Gaps = 34/297 (11%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ V+ G ++ + +D G G DT + + L + ++I+ ++
Sbjct: 216 GTNPAVLYGFEGDDRLTGADQDDTILGGDGNDTIIEISGNNLIEGNNNNDSIVGGTDSD- 274
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
R+ + ++ + + G D
Sbjct: 275 ---------RINGGAGADTILGGDGADTIDGGLGNDSIFGDSGNDNIRGFGDSNTILGGS 325
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
G D + D G G S +
Sbjct: 326 GNDTI---------EGTIAGSNSIDGGENDDVITEIGFGSTLLGGLGNDSILGFSASTIN 376
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
V+ G + + + + + + + GS+
Sbjct: 377 GGDGSDTINVEFGNNTIDGGMGNDSIEIAINPSFTISGSGNTVS--GSNGNDTIIAINGS 434
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
+ EG ++++ D + G + G + +F
Sbjct: 435 NLIEG-------------NNDNDSIVGGTDSDTINGGTGADTLTGGLGSDTFSFAAT 478
>gi|330943684|gb|EGH45986.1| calcium binding hemolysin protein [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 775
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 83/302 (27%), Gaps = 74/302 (24%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + G+D L + G + T+
Sbjct: 348 GDDNITGYETADMLKGLRGNDTLS-------------GRAGDDVLDGGDGRDTLNGEDGN 394
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF------- 321
++++G +GND++ G + ++V SGND G G DT+ + S I +
Sbjct: 395 DTLLGGAGNDMLSGGNGDDVMDGGSGNDTLSGGGGADTYIFRKGSGQDTILNYAYSDATQ 454
Query: 322 ------------------------------ENAIIVYDANEHKQDFLSDVERLRFAD--- 348
+ + ++ D +++++F+D
Sbjct: 455 NKLDVVKLEGLTASQVSIRREGDDLIFQISDTGETLRVSSHFSSD-AYAIDQVQFSDGIF 513
Query: 349 ---------------QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
L A ++ L G D+ + + +
Sbjct: 514 WDKTQITAALLVGTAGDDSITGYATEDKLSGLAGHDTLSGRAGNDILDGGEGNDTLYGED 573
Query: 394 GRDITF-----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G D D+ D L G D A + T+ ++G D Y +
Sbjct: 574 GSDTLLGGKGNDALSGGDGNDLLDGGVGMDSLAGGKGSDTYTFRKGYGQDTINNSAYNDT 633
Query: 449 HE 450
E
Sbjct: 634 TE 635
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/368 (10%), Positives = 93/368 (25%), Gaps = 65/368 (17%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS-----------HN 123
D + + + D G+G T + +
Sbjct: 21 YGEDGNDLLNGGADADLLYGGNGNDTLDGGGGNDTLDGGMGSDTYVLRKGSGQDQINNYT 80
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
+ + + + N + + ++ S + D Y
Sbjct: 81 SDDKTAQKIDKVKLDGLNPADITVHREYNDLVIQIKSTGDSIRVNSHFNQDGDSVYAVDQ 140
Query: 184 MVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI 243
+ V GA + ++ G+D L
Sbjct: 141 LQFADSTVWD--GAKLKTEVLKTTGDNDTIIGYQTADQLFGLAGNDTLS----------- 187
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ G T+ ++++G + ND + G N++ +GND G G
Sbjct: 188 --GRGGDDFLDGGAGKDTLNGEEGSDTLLGGADNDTLSGGEGNDLLDGGTGNDSLAGGLG 245
Query: 304 LDTFFYYAPSYLYKIY---------------------------------------RFENA 324
DT+ + S IY ++
Sbjct: 246 SDTYVFRRGSGQDTIYNSVSNEANTDIQDVIVLEGLKPEDVVMRRESDDLIIQIKDTNDS 305
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ V + +++++FAD + + + ++L A +++ D+ + ++
Sbjct: 306 VRVSGHFSSYVAYNYAIDQVKFADGSVWDTSFIKSALLTGNAGDDNITGYETADMLKGLR 365
Query: 385 HFYEFGLS 392
Sbjct: 366 GNDTLSGR 373
Score = 52.9 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 79/287 (27%), Gaps = 71/287 (24%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
++ ++ N T++ +++ G GND++ G + ++ + +GND DG G DT
Sbjct: 1 TVYFHDGNDTLSGEAGSDTLYGEDGNDLLNGGADADLLYGGNGNDTLDGGGGNDTLDGGM 60
Query: 312 PSYLYKIYRFENAIIVYDANEH-------------------------------------- 333
S Y + + + +
Sbjct: 61 GSDTYVLRKGSGQDQINNYTSDDKTAQKIDKVKLDGLNPADITVHREYNDLVIQIKSTGD 120
Query: 334 ----------KQDFLSDVERLRFADQCI------------------DSVNVKQRSILEYT 365
D + V++L+FAD + + + L
Sbjct: 121 SIRVNSHFNQDGDSVYAVDQLQFADSTVWDGAKLKTEVLKTTGDNDTIIGYQTADQLFGL 180
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI-----TFDSYLYLGSYDDLRNVFGSDRG 420
A + L G D + EG D D+ D L G+D
Sbjct: 181 AGNDTLSGRGGDDFLDGGAGKDTLNGEEGSDTLLGGADNDTLSGGEGNDLLDGGTGNDSL 240
Query: 421 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
A T+ + G D ++ D+ + +
Sbjct: 241 AGGLGSDTYVFRRGSGQDTIYNSVSNEANTDIQDVIVLEGLKPEDVV 287
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/222 (12%), Positives = 58/222 (26%), Gaps = 57/222 (25%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D ++ G ++ G N + +++ G G+D ++G N+
Sbjct: 530 DDSITGYATEDKLSGLAGHDTLSGRAGNDILDGGEGNDTLYGEDGSDTLLGGKGNDALSG 589
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV------------------------ 327
GND+ DG G+D+ S Y + +
Sbjct: 590 GDGNDLLDGGVGMDSLAGGKGSDTYTFRKGYGQDTINNSAYNDTTENKLDVIRLEGLNVS 649
Query: 328 ------------------------YDANEHKQDFLSDVERLRFADQCI---------DSV 354
+ +++L+FAD I +
Sbjct: 650 DVVIKRDSDDLLIQIKESGETLRVTSHFSASTIYGYAIDQLQFADGTILENAQIRAALLL 709
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
++ ++ + + G D +G+D
Sbjct: 710 GTDADDVMTGYSTDDVIAGDGGNDTLSGGSGSDRIEGGDGKD 751
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 54/478 (11%), Positives = 108/478 (22%), Gaps = 39/478 (8%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
I + AD G T+ + G G + G ++
Sbjct: 161 TTGDNDTIIGYQTADQLFGLAGNDTLSGRGGDDFLDGGAGKDTLNGEEGSDTLLGGADND 220
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQ 213
+ + + + G Y +GS + IY +
Sbjct: 221 TLSGGEGNDLLDGGTGNDSLAGGLGS-------------DTYVFRRGSGQDTIYNSVSNE 267
Query: 214 KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
++ I G + I + + S + +A + I+ V
Sbjct: 268 ANTDIQDVIVLEGLKPEDVVMRRESDDLIIQIKDTNDSVRVSGHFSSYVAYNYAIDQVKF 327
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ G+ + + ++G+D G D + ++ +
Sbjct: 328 ADGSVWDTSFIKSALLTGNAGDDNITGYETADML--KGLRGNDTLSGRAGDDVLDGGDGR 385
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
L D + +L + + G D + +
Sbjct: 386 DT--------LNGEDGNDTLLGGAGNDMLSGGNGDDVMDGGSGNDTLSGGGGADTYIFRK 437
Query: 394 GR--DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
G D + + + L V A+ G ++SH
Sbjct: 438 GSGQDTILNYAYSDATQNKLDVVKLEGLTASQVSIRREGDDLIFQISDTGETLRVSSHFS 497
Query: 452 LINAFAD----------APDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGS 501
D + + + T D L +D L G+
Sbjct: 498 SDAYAIDQVQFSDGIFWDKTQITAALLVGTAGDDSITGYATEDKLSGLAGHDTLSGRAGN 557
Query: 502 DR----GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
D Y G AL ++ L G D ++
Sbjct: 558 DILDGGEGNDTLYGEDGSDTLLGGKGNDALSGGDGNDLLDGGVGMDSLAGGKGSDTYT 615
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 45/372 (12%), Positives = 83/372 (22%), Gaps = 68/372 (18%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + + D G G T + + L
Sbjct: 390 GEDGNDTLLGGAGNDMLSGGNGDDVMDGGSGNDTLSGGGGADTYIFRKGSGQDTI---LN 446
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ S + V + S ++ + D + S Y
Sbjct: 447 YAYSDATQNKLDVVKLEGLTASQVSIRREGDDLIFQISDTGETLRVSSHFSSDA-----Y 501
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSI 253
+ + I+ + Q + + T D G D + + +
Sbjct: 502 AIDQVQFSDGIFWDKTQITAALLVGTAGDDSITGYATEDKLSGLAGHDTLSGRAG-NDIL 560
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G E N T+ ++++G GND + G N++ G D G G DT+ +
Sbjct: 561 DGGEGNDTLYGEDGSDTLLGGKGNDALSGGDGNDLLDGGVGMDSLAGGKGSDTYTFRKGY 620
Query: 314 YLYKIYRFENAII---------------------------------------VYDANEHK 334
I V
Sbjct: 621 GQDTINNSAYNDTTENKLDVIRLEGLNVSDVVIKRDSDDLLIQIKESGETLRVTSHFSAS 680
Query: 335 QDFLSDVERLRFADQCI------------------DSVNVKQRSILEYTASYEDLIQVIG 376
+ +++L+FAD I ++ + L G
Sbjct: 681 TIYGYAIDQLQFADGTILENAQIRAALLLGTDADDVMTGYSTDDVIAGDGGNDTLSGGSG 740
Query: 377 QDVFESMKHFYE 388
D E
Sbjct: 741 SDRIEGGDGKDN 752
Score = 42.9 bits (99), Expect = 0.16, Method: Composition-based stats.
Identities = 60/511 (11%), Positives = 101/511 (19%), Gaps = 73/511 (14%)
Query: 78 DIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
D S T + + AD+ G G T+ + +G
Sbjct: 6 DGNDTLSGEAGSDTLYGEDGNDLLNGGADADLLYGGNGNDTLDGGGGNDTLDGGMG---- 61
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
S + +Y + +DI ++
Sbjct: 62 ----------SDTYVLRKGSGQDQINNYTSDDKTAQKIDKVKLDGLNPADITVHREYN-- 109
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ + +I+ G L D +
Sbjct: 110 ------DLVIQIKSTGDSIRVNSHFNQDGDSVYAVDQLQFADSTVWDGAKLKTEVLKTTG 163
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
N TI + + + G +GND + G ++ +G D +G G DT
Sbjct: 164 DNDTIIGYQTADQLFGLAGNDTLSGRGGDDFLDGGAGKDTLNGEEGSDTLL--------- 214
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
D LS E +L+ + L +G
Sbjct: 215 -------------GGADNDTLSGGE---------------GNDLLDGGTGNDSLAGGLGS 246
Query: 378 DV--FESMKHFYEFGLSEGRDITFDSYLY-----LGSYDDLRNVFGSDRGAAARHYITHG 430
D F S + D L D + D +
Sbjct: 247 DTYVFRRGSGQDTIYNSVSNEANTDIQDVIVLEGLKPEDVVMRRESDDLIIQIKDTNDSV 306
Query: 431 VKEGRNPDAFKALEYI-----ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
G I A +F + L D
Sbjct: 307 RVSGHFSSYVAYNYAIDQVKFADGSVWDTSFIKSALLTGNAGDDNITGYETADMLKGLRG 366
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
L + G D G L + + +
Sbjct: 367 NDTLSGRAGDDVLDGGDGRDTLN--GEDGNDTLLGGAGNDMLSGGNGDDVMDGGSGNDTL 424
Query: 546 LVQAGKDHFSNFGYEEGRSITFNPDLYLTSY 576
G D + +I T
Sbjct: 425 SGGGGADTYIFRKGSGQDTILNYAYSDATQN 455
>gi|89268105|emb|CAJ83580.1| matrix metalloproteinase 15 (membrane-inserted) [Xenopus (Silurana)
tropicalis]
Length = 584
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 52/190 (27%), Gaps = 35/190 (18%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS----- 74
+ W+ + Y + + + R A WSK LTF E
Sbjct: 62 GRKWNQQHLTYSIQNYSDKLGMHNS-------IDAIRKAFDVWSKATSLTFREVPYEAVR 114
Query: 75 ---IHSDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGK 116
+DI + ++ + P + ++
Sbjct: 115 QRHSSADILILFASGFHGDSSPFDGPGGFLAHAYFPGPGMGGDAHFDSEEPWTVENMDLA 174
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYE-----NDSFLTSVMSYFMPQDS 171
G L A+HE+GH+LGL H + + + D E D Y P D
Sbjct: 175 GNHLFLVAVHELGHSLGLEHSNNPSAIMAPFYQWMDTEDFQLPEDDRRGIQQLYGPPVDQ 234
Query: 172 MMDASFGYCA 181
+
Sbjct: 235 IPSTQSPLPT 244
>gi|261366057|ref|ZP_05978940.1| iron-regulated protein FrpA [Neisseria mucosa ATCC 25996]
gi|288565335|gb|EFC86895.1| iron-regulated protein FrpA [Neisseria mucosa ATCC 25996]
Length = 378
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 68/220 (30%), Gaps = 4/220 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D+ G +Y+ + G E N ++ ++++ G++GND + G
Sbjct: 129 GWDTADVLDGGKGNDYLS-GYNGDDLLKGGEGNDSLYGGEGVDTLEGNAGNDYLSGEKGA 187
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-AIIVYDANEHKQDFLSDVERLR 345
++ GND G G D + ++Y + A H +D +SD
Sbjct: 188 DILKGGEGNDELHGGEGSDIL--NGGAGDDRLYGGSSEADTYVFEKGHGKDVVSDSAYQA 245
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
+ K + + +I+ G + +++ +++ D FD
Sbjct: 246 AHTDTLRFNGAKFAEAVFTRSGNNLVIKAYGGEDAVTVQGYFDSSSYRYYDFAFDDKTVT 305
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
V G Y L
Sbjct: 306 AKDMAGMKVEGVGTDGNESLYGWDTADVLDGGKGNDYLSG 345
Score = 39.4 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 22/189 (11%), Positives = 47/189 (24%), Gaps = 10/189 (5%)
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
G+D+ +G +G D + + ++ H +D +SD
Sbjct: 1 MHGGEGSDILNGGAGDDRLYGGSSEADTYVFEKG----------HGKDVVSDSAYQAAHT 50
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ K + + +I+ G + +++ +++ D FD
Sbjct: 51 DTLRFNGAKFAEAVFTRSGNNLVIKAYGGEDAVTVQGYFDSSSYRYYDFAFDDKTVTAKD 110
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
V G Y L + L + G D
Sbjct: 111 MAGMKVEGVGTDGNESLYGWDTADVLDGGKGNDYLSGYNGDDLLKGGEGNDSLYGGEGVD 170
Query: 469 HFSNFGCEE 477
+
Sbjct: 171 TLEGNAGND 179
Score = 39.0 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 28/226 (12%), Positives = 52/226 (23%), Gaps = 44/226 (19%)
Query: 280 VIGNSANNVFFESSGNDVFDGSSG-LDTFFYYAP-------------------------S 313
+ G +++ +G+D G S DT+ +
Sbjct: 1 MHGGEGSDILNGGAGDDRLYGGSSEADTYVFEKGHGKDVVSDSAYQAAHTDTLRFNGAKF 60
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVE--------RLRFADQC----------IDSVN 355
R N +++ + F D+ ++ V
Sbjct: 61 AEAVFTRSGNNLVIKAYGGEDAVTVQGYFDSSSYRYYDFAFDDKTVTAKDMAGMKVEGVG 120
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
L + + L G D EG D + + N +
Sbjct: 121 TDGNESLYGWDTADVLDGGKGNDYLSGYNGDDLLKGGEGNDSLYGGEGVDTLEGNAGNDY 180
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
S A G E + L A + L ++A
Sbjct: 181 LSGEKGADILKGGEGNDELHGGEGSDILNGGAGDDRLYGGSSEADT 226
>gi|77747696|ref|NP_779625.2| bacteriocin [Xylella fastidiosa Temecula1]
gi|307578304|gb|ADN62273.1| bacteriocin [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 1406
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 60/420 (14%), Positives = 110/420 (26%), Gaps = 89/420 (21%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG--TILSHNALHEI---- 128
+ S S + AD + + G G TI+ + ++
Sbjct: 907 GAGNDVLKVSYWSADNVLNGGSGDDLLYGSAYADTYLFNKGDGHDTIIEQSGDDKLVFGE 966
Query: 129 GHA------LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
G A L + G + DS + + Q D + T
Sbjct: 967 GIAAADVRLLRQGQDVVLDLGNGHDSIRLKDWLDSNGYRNGNNDIEQIVFADGTIWTPET 1026
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+ + + + GDD L
Sbjct: 1027 LSSMGLTTLGTL--------------GNDTLNGWQGKDILLGGDGDDTLY---------- 1062
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN--SANNVFFESSGNDVFDG 300
+ + G + + T + G +GNDV+ + SA+NV SG+D+ G
Sbjct: 1063 ---GSGGNDLLLGGAGDDVLDGGTGSNRLEGGAGNDVLKVSYWSADNVLNGGSGDDLLYG 1119
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDAN--------------------EHKQDFL-- 338
S+ DT+ + I + + D +
Sbjct: 1120 SAYADTYLFNKGDGHDTIIEQSGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHDSIRL 1179
Query: 339 -------------SDVERLRFADQCI-----------DSVNVKQRSILEYTASYEDLIQV 374
+D+E++ FAD I ++ L + L+
Sbjct: 1180 KDWLDSNGYRNGNNDIEQIVFADGTIWTPETLSSMGLTTLGTLGNDTLNGWQGKDILLGG 1239
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G DV + G D+ Y + + L G D + + T+ +G
Sbjct: 1240 DGDDVLDGGTGSNRLEGGAGNDVLK--VSYWSADNVLNGGSGDDTLYGSAYADTYLFNKG 1297
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 89/312 (28%), Gaps = 31/312 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ Q + D+ G L+ G + + + G + ++ +
Sbjct: 817 DRTAVTPDGRQALADA-GIPLIAGNAEGSDATDLLFGDAGANLLRGGGGDDLLSGGDGDD 875
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---------FYYAPSYLYKIYR 320
++ G +GND + G++ N+V +G++ +G +G D S +Y
Sbjct: 876 TLEGGAGNDTLSGDAGNDVLDGGTGSNRLEGGAGNDVLKVSYWSADNVLNGGSGDDLLYG 935
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVIGQDV 379
A D + +E+ D+ + + + + L G D
Sbjct: 936 SAYADTYLFNKGDGHDTI--IEQ-SGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHDS 992
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSY--DDLRNVFGSDRGAAARHYITHGVKE---G 434
G G + G+ + + G + +G +
Sbjct: 993 IRLKDWLDSNGYRNGNNDIEQIVFADGTIWTPETLSSMGLTTLGTLGNDTLNGWQGKDIL 1052
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF----------- 483
D L ++ L+ D G + + V++
Sbjct: 1053 LGGDGDDTLYGSGGNDLLLGGAGDDVLDGGTGSNRLEGGAGNDVLKVSYWSADNVLNGGS 1112
Query: 484 -DSYLYLGSYDD 494
D LY +Y D
Sbjct: 1113 GDDLLYGSAYAD 1124
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 47/345 (13%), Positives = 85/345 (24%), Gaps = 57/345 (16%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ D+ G G T+ + LG +GG ++ ND
Sbjct: 1039 GNDTLNGWQGKDILLGGDGDDTLYGSGGNDLL---LGGAGDDVLDGGTGSNRLEGGAGND 1095
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
+SY+ + + S +YG+ + Y
Sbjct: 1096 VLK---VSYWSADNVLNGGSGD-------------DLLYGSAYA----DTYLFN----KG 1131
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI------------AQ 264
TI + GDD L + L + + +I
Sbjct: 1132 DGHDTIIEQSGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHDSIRLKDWLDSNGYRNG 1191
Query: 265 HTVIESVVGSSGNDVVIGNSANNVF----FESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ IE +V + + + + GND +G G D +
Sbjct: 1192 NNDIEQIV--FADGTIWTPETLSSMGLTTLGTLGNDTLNGWQGKDILLGGDGDDVLDGGT 1249
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED--LIQVIGQD 378
N + D L + + L +A + + G D
Sbjct: 1250 GSNRLE----GGAGNDVLK----VSYWSADNVLNGGSGDDTLYGSAYADTYLFNKGDGHD 1301
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ EG + + + S DDL +F
Sbjct: 1302 TIIEQSGDDKLVFGEG--LHREEACFTRSGDDLSILFNGSEDQVT 1344
Score = 42.9 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 38/303 (12%), Positives = 71/303 (23%), Gaps = 67/303 (22%)
Query: 270 SVVGSSGNDVVIGNSANN------------------VFFESSGNDVFDGSSGLDTFFYYA 311
+ GS D++ G++ N +GND G +G D
Sbjct: 840 NAEGSDATDLLFGDAGANLLRGGGGDDLLSGGDGDDTLEGGAGNDTLSGDAGND--VLDG 897
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED- 370
+ ++ ++ ++ + +L +A +
Sbjct: 898 GTGSNRLEGGAGNDVL---------------KVSYWSADNVLNGGSGDDLLYGSAYADTY 942
Query: 371 -LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D + EG + + D G D +
Sbjct: 943 LFNKGDGHDTIIEQSGDDKLVFGEG----------IAAADVRLLRQGQDVVLDLG----N 988
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G R D + Y + D+ + + S+ G + D+
Sbjct: 989 GHDSIRLKDWLDSNGYRNGNNDIEQIVFADGTIWTP--ETLSSMGLTTLGTLGNDTLNGW 1046
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D L G D + L A + L A
Sbjct: 1047 QGKDILLGGDGDDTLYGS--------------GGNDLLLGGAGDDVLDGGTGSNRLEGGA 1092
Query: 550 GKD 552
G D
Sbjct: 1093 GND 1095
>gi|283837835|ref|NP_001164610.1| interstitial collagenase [Oryctolagus cuniculus]
gi|116855|sp|P13943|MMP1_RABIT RecName: Full=Interstitial collagenase; AltName: Full=Matrix
metalloproteinase-1; Short=MMP-1; Flags: Precursor
gi|164888|gb|AAB88016.1| collagenase-1 precursor [Oryctolagus cuniculus]
Length = 468
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 54/185 (29%), Gaps = 32/185 (17%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ + T D+ A WS V LTF + S +DI
Sbjct: 107 RWEQTHLTYRIENYTPDLSRADVD-------NAIEKAFQLWSNVTPLTFTKVSKGQADIM 159
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ P +++FD+ D W + L A
Sbjct: 160 ISFVRGDHRDNSPFDGPEGQLAHAFQP--GLGIGGDVHFDEDDRWTKDF-RNYNLYRVAA 216
Query: 126 HEIGHALGLMHPGSYN---GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
HE+GH+LGL H ++ D D Y Q+ T
Sbjct: 217 HELGHSLGLSHSTDIGALMYPNYMFSGDVQLAQDDIDGIQAIYGPSQNPSQPVG---PQT 273
Query: 183 PMVSD 187
P V D
Sbjct: 274 PKVCD 278
>gi|110741618|dbj|BAE98757.1| predicted GPI-anchored protein [Arabidopsis thaliana]
Length = 378
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 56/220 (25%), Gaps = 54/220 (24%)
Query: 46 ELNPNAQEVARWALGEWSKVVDLTFE--ETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN 103
L + V A G WS V L F E+ SDI + +D +
Sbjct: 180 PLTEEVKSVFSRAFGRWSDVTALNFTLSESFSTSDITIGFYTGDHGDGEPFDGVLGTLAH 239
Query: 104 F----------DKADVWRYGIGKGTILSHN--------ALHEIGHALGLMHPGSYNGGYP 145
D + W + LS A+HEIGH LGL H
Sbjct: 240 AFSPPSGKFHLDADENWVVSGDLDSFLSVTAAVDLESVAVHEIGHLLGLGHS-------- 291
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
S S+M + D+ +Q +YGA
Sbjct: 292 -----------SVEESIMY-------PTITTGKRKVDLTNDDVEGIQYLYGANPN----- 328
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ D+GG + L
Sbjct: 329 ---FNGTTSPPSTTKHQRDTGGFSAAWRIDDSSRSTIVSL 365
>gi|77464082|ref|YP_353586.1| hypothetical protein RSP_0513 [Rhodobacter sphaeroides 2.4.1]
gi|77388500|gb|ABA79685.1| hypothetical protein RSP_0513 [Rhodobacter sphaeroides 2.4.1]
Length = 475
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 41/120 (34%), Gaps = 2/120 (1%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ G + + + + G N + + + G +G+D +IG + ++
Sbjct: 311 TAAINGAGNGLANVLWGNGAANRLSGGGGNDRLEGRDGSDVLNGGTGHDTLIGGAGHDRL 370
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
+G+D G SG D + A A + ++ ++D D+
Sbjct: 371 AGGTGSDRLVGGSGNDRL--DGGIDRDVLTGGAGADTFVFAAGYGREVITDFRVGNGGDR 428
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 4/113 (3%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ ++ +G + L GG + ++ S + G + T+ + +
Sbjct: 315 NGAGNGLANVLWGNGAANRL---SGGGGNDRLEGRDGS-DVLNGGTGHDTLIGGAGHDRL 370
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
G +G+D ++G S N+ DV G +G DTF + A I F
Sbjct: 371 AGGTGSDRLVGGSGNDRLDGGIDRDVLTGGAGADTFVFAAGYGREVITDFRVG 423
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 48/207 (23%), Gaps = 35/207 (16%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY-----IDLNTESWSSIGGYEKNMT 261
+ + + +D + G +D S S
Sbjct: 247 FGGNDTLRGGGAADRMIGGTRNDTYIVDHAGDEVVERAGEGLDRVCASVSHQLAAHVERL 306
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ T + G+ +V+ GN A N GND +G G D
Sbjct: 307 VLTGTAAINGAGNGLANVLWGNGAANRLSGGGGNDRLEGRDGSDVL-------------- 352
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D L L + + L I +DV
Sbjct: 353 --------NGGTGHDTLIG------GAGHDRLAGGTGSDRLVGGSGNDRLDGGIDRDVLT 398
Query: 382 SMKHFYE--FGLSEGRDITFDSYLYLG 406
F GR++ D + G
Sbjct: 399 GGAGADTFVFAAGYGREVITDFRVGNG 425
>gi|227822864|ref|YP_002826836.1| hypothetical protein NGR_c23240 [Sinorhizobium fredii NGR234]
gi|227341865|gb|ACP26083.1| hypothetical protein NGR_c23240 [Sinorhizobium fredii NGR234]
Length = 1049
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/309 (14%), Positives = 76/309 (24%), Gaps = 22/309 (7%)
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGA--PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
D + AT K+YG N + + +
Sbjct: 701 GGDGNDTLQATYSTQFDTQADKLYGGAGNDSLRINQGDFADAGTGTDRVYVDLANQATGV 760
Query: 230 LLDLTLIGGVKNYIDLNTESWS-SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
+ N T + S G N ++ + + + G+ GND + G + N+
Sbjct: 761 SFVFSNGTVTVNAATKFTGAESLEFYGTSGNDSVTAGALNDVLKGNGGNDTLRGGAGNDR 820
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD------------------A 330
+ +GND G +G DT +
Sbjct: 821 LEDGAGNDKLYGDAGNDTLIRTNEIGTDSFDGGAGTDTLKFSFDSSMSVKLDLANNANNG 880
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
K ++ +E + + Q D + + L G DV E
Sbjct: 881 GMAKGLTVTGIEVVYGSSQDDDIRGTSANEKFFGGGADDFLFGGAGDDVLEGGAAGDLLQ 940
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
G+D G+ D F + G+ NP AS
Sbjct: 941 GGTGKDQFVFHSDGFGTG-DQIVDFTRGQDKLVVDRSDFGMAATGNPGLVVGANPTASGT 999
Query: 451 DLINAFADA 459
F
Sbjct: 1000 GPQFLFESD 1008
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 82/567 (14%), Positives = 149/567 (26%), Gaps = 91/567 (16%)
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
G AL + G+ G +D+ + + D ++D +
Sbjct: 511 GAALSVKFYGANGNDRLTGGKGSDWLDGGAGNDTLKGGDGNDRIIDDGGANTIDAGTGND 570
Query: 189 VAVQKIYGAPKGS-----LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-- 241
+ +I + GN+ I + + T+ G D + G N
Sbjct: 571 LVELEIASGTAANSILLGTGNDTVTINAFRGLTAGKFTVDGGTGTDTAAVNRSMGTANMS 630
Query: 242 ------------YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ L I ++ + + G GND + G + N+
Sbjct: 631 FVLSPSAVLTNGDVTLRNVEAVQIWTGSGTDSLTGSALSDLFHGGGGNDTLKGLAGNDRL 690
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSY----LYKIYRFENAIIVYDANEHKQDFLSDVER-- 343
+ +G D +G G DT + K+Y + D + +R
Sbjct: 691 YGGAGADRLEGGDGNDTLQATYSTQFDTQADKLYGGAGNDSLRINQGDFADAGTGTDRVY 750
Query: 344 -----------LRFADQCIDSVNVKQRS-----ILEYTASYEDLIQVIGQDVFESMKHFY 387
F++ + + + T+ + + DV +
Sbjct: 751 VDLANQATGVSFVFSNGTVTVNAATKFTGAESLEFYGTSGNDSVTAGALNDVLKGNGGND 810
Query: 388 EFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIA 447
G D D Y D N N + + A
Sbjct: 811 TLRGGAGNDRLEDGAGNDKLYGDAGNDTLIRT----------------NEIGTDSFDGGA 854
Query: 448 SHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAA 507
+ L +F + + ++ +N G +G VT +Y S DD
Sbjct: 855 GTDTLKFSFDSSMSVKLDLANNANNGGMAKGLTVTGIEVVYGSSQDDDI----------- 903
Query: 508 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITF 567
R A + + + L D A D G F
Sbjct: 904 -----------RGTSANEKFFGGGADDFLFGGAGDDVLEGGAAGD--LLQGGTGKDQFVF 950
Query: 568 NPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKAD 627
+ D + T D F + GM G+ + + +
Sbjct: 951 HSDGFGTG--DQIVDFTRGQDKLVVDRSDFGMAATGNPGL--------VVGANPTASGTG 1000
Query: 628 LSLSFDHKKVDLYTDYFGDGNYYDSDL 654
F+ L+ D G GN YD++L
Sbjct: 1001 PQFLFESDNGRLWYDRDGTGNNYDAEL 1027
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/306 (13%), Positives = 75/306 (24%), Gaps = 32/306 (10%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G + T G + L T++ ++ G I + + G ND + G+ N
Sbjct: 33 GGNEAMATNPGTDQQDFILGTDAVDTLSGGFSTDQIFGLAGNDILSGGFQNDTINGDVGN 92
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL-------- 338
+ SG+D G +G D+ + + ++ D L
Sbjct: 93 DAISGGSGSDNIQGGAGADSINAGTGDDMVMAFEPADSDGDVVDGGLGFDTLALSFTDQT 152
Query: 339 ----------------------SDVERL--RFADQCIDSVNVKQRSILEYTASYEDLIQV 374
++VE+ D + L + L
Sbjct: 153 TALTFAAPDPIAQSNLAGGIKVTNVEQFMIVGTDFADTITGGRWNDFLNGGDGNDTLNGG 212
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
IG+D+ + G DI N G + + G
Sbjct: 213 IGRDMLDGADGDDTLNGGNGSDILSGDIGADTIRGGYGNDMGDGGVGDDKLFGEAGNDHL 272
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ AL + L A + + D+ D
Sbjct: 273 TGANGADALSGGDGDDTLYGDVAFNLIHSGNDTLDGGSGNDFLNGGLGLDTITGGDGNDR 332
Query: 495 LRNVFG 500
+ G
Sbjct: 333 VGVTIG 338
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/255 (12%), Positives = 71/255 (27%), Gaps = 9/255 (3%)
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIY 207
G ND N +S D++ + D + + G + +
Sbjct: 80 GFQNDTINGDVGNDAISGGSGSDNIQGGAGADSINAGTGDDMVMAFEPADSDGDVVDGGL 139
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID------LNTESWSSIGGYEKNMT 261
+ T D + + + G + + T+ +I G N
Sbjct: 140 GFDTLALSFTDQTTALTFAAPDPIAQSNLAGGIKVTNVEQFMIVGTDFADTITGGRWNDF 199
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ +++ G G D++ G ++ +G+D+ G G DT
Sbjct: 200 LNGGDGNDTLNGGIGRDMLDGADGDDTLNGGNGSDILSGDIGADTIR-GGYGNDMGDGGV 258
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
+ + +A + + L D +++ + + L G D
Sbjct: 259 GDDKLFGEAGNDHLTGANGADALSGGDGDDTLYGDVAFNLI--HSGNDTLDGGSGNDFLN 316
Query: 382 SMKHFYEFGLSEGRD 396
+G D
Sbjct: 317 GGLGLDTITGGDGND 331
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 60/474 (12%), Positives = 107/474 (22%), Gaps = 65/474 (13%)
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
GS G ND +S DS+ + + G
Sbjct: 391 MGSSTVDNWTTGDGNDTMRSHDGNDTLSSGKGNDSIDSGNGVDIVNSGDGNDTITVGNGG 450
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD--LTLIGGVKNYIDLNTESWSSIG 254
G + + ++D+ T SG L+ ++ I + S +
Sbjct: 451 KDTIRAGAGTDTVTIVRRDATTNLTFSISGVTGTLNDGTSVTDAEHYAIHAGSGSDTLTA 510
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DGSS---------- 302
G ++ + + G G+D + G + N+ GND DG +
Sbjct: 511 GAALSVKFYGANGNDRLTGGKGSDWLDGGAGNDTLKGGDGNDRIIDDGGANTIDAGTGND 570
Query: 303 -------------------GLDTFFYYA----PSYLYKIYRFENAIIVYDANEHKQD--- 336
G DT A + + +
Sbjct: 571 LVELEIASGTAANSILLGTGNDTVTINAFRGLTAGKFTVDGGTGTDTAAVNRSMGTANMS 630
Query: 337 --------------FLSDVERLRF--ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
L +VE ++ + + L + G D
Sbjct: 631 FVLSPSAVLTNGDVTLRNVEAVQIWTGSGTDSLTGSALSDLFHGGGGNDTLKGLAGNDRL 690
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+G D Y +D + G + +
Sbjct: 691 YGGAGADRLEGGDGNDTLQ--ATYSTQFDTQADKLYGGAGNDSLRINQGDFADAGTGTDR 748
Query: 441 KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFG 500
++ + F++ V E DS D L+ G
Sbjct: 749 VYVDLANQATGVSFVFSNGTVTVNAATKFTGAESLEFYGTSGNDSVTAGALNDVLKGNGG 808
Query: 501 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA--FADAPDLVQAGKD 552
+D G + L A ++ LI AG D
Sbjct: 809 NDTLR-----GGAGNDRLEDGAGNDKLYGDAGNDTLIRTNEIGTDSFDGGAGTD 857
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 46/322 (14%), Positives = 81/322 (25%), Gaps = 38/322 (11%)
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
FM + D AD G + + + +G +G + G +
Sbjct: 180 FMIVGTDFADTITGGRWNDFLNGGDGNDTLNGGIGRDMLDGADGDDTLNGGNGSDIL--- 236
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
D D G M V K++G +
Sbjct: 237 ---------SGDIGADTIRGGYGNDMGDGGVGDDKLFGEA----------GNDHLTGANG 277
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+ GDD L +L ++ G N + ++++ G GND
Sbjct: 278 ADALSGGDGDDTLY------GDVAFNLIHSGNDTLDGGSGNDFLNGGLGLDTITGGDGND 331
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
V G D +G +G D S + + + D
Sbjct: 332 RVGVTI-------GHGRDTINGGAGTDILEVQNLSGTFTAKASNLSNTLSDGTTFINMEA 384
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + + + + L G D +S +G D
Sbjct: 385 YSFDSGMGSSTVDNWTTGDGNDTMRSHDGNDTLSSGKGNDSIDSGNGVDIVNSGDGNDTI 444
Query: 399 FDSYLYLGSYDDLRNVFGSDRG 420
+ G D +R G+D
Sbjct: 445 ---TVGNGGKDTIRAGAGTDTV 463
>gi|197105625|ref|YP_002131002.1| hypothetical protein PHZ_c2162 [Phenylobacterium zucineum HLK1]
gi|196479045|gb|ACG78573.1| hypothetical protein PHZ_c2162 [Phenylobacterium zucineum HLK1]
Length = 282
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 61/227 (26%), Gaps = 15/227 (6%)
Query: 215 DSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
Q+++ G D L D L GG + + G + + ++ +
Sbjct: 3 GGAGSQSVWGDGADQSLFLGADDDVLHGGGGADTVASAGGDDRLFGDDGDDAVSGGEGAD 62
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY------LYKIYRFEN 323
V G +G D V GN ++ G D G G D Y +
Sbjct: 63 QVWGGAGEDHVHGNVGDDFVHGGEGRDTLHGGQGHDVVRGGQGDDIALGDLGYDTLFGDL 122
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
V + AD + + + ++ +G DV
Sbjct: 123 GADVLQGGAGDDVVWGGGGLVPGADAGDWIDGGEGSDFVHGNQGDDTVLGGLGADVVHGG 182
Query: 384 KHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ +G D D L G+ D VF +
Sbjct: 183 QGADRLEGGDGADTLSGDQGDDVLIGGAGADRFLVFAGGGVDRILDF 229
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 3/148 (2%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+G +G+ V G+ A+ F + +DV G G DT + +++ + V
Sbjct: 2 IGGAGSQSVWGDGADQSLFLGADDDVLHGGGGADTV--ASAGGDDRLFGDDGDDAVSGGE 59
Query: 332 EHKQDFLSDVER-LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
Q + E + + R L ++ + G D+ +
Sbjct: 60 GADQVWGGAGEDHVHGNVGDDFVHGGEGRDTLHGGQGHDVVRGGQGDDIALGDLGYDTLF 119
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSD 418
G D+ + V G+D
Sbjct: 120 GDLGADVLQGGAGDDVVWGGGGLVPGAD 147
Score = 45.5 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
++ID S + G + + T+ + V G G D + G + G+D
Sbjct: 146 ADAGDWIDGGEGS-DFVHGNQGDDTVLGGLGADVVHGGQGADRLEGGDGADTLSGDQGDD 204
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFE 322
V G +G D F +A + +I F+
Sbjct: 205 VLIGGAGADRFLVFAGGGVDRILDFD 230
Score = 41.3 bits (95), Expect = 0.48, Method: Composition-based stats.
Identities = 36/244 (14%), Positives = 63/244 (25%), Gaps = 29/244 (11%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ T+ +GGDD L D + GG + G + +
Sbjct: 25 DDVLHGGGGADTVASAGGDDRLFGDDGDDAVSGGEGADQVWGGAGEDHVHGNVGDDFVHG 84
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------------- 307
+++ G G+DVV G +++ G D G G D
Sbjct: 85 GEGRDTLHGGQGHDVVRGGQGDDIALGDLGYDTLFGDLGADVLQGGAGDDVVWGGGGLVP 144
Query: 308 ------FYYAPSYLYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ ++ + V +RL D +
Sbjct: 145 GADAGDWIDGGEGSDFVHGNQGDDTVLGGLGADVVHGGQGADRLEGGDGADTLSGDQGDD 204
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRG 420
+L A + + G V + + G D L D + + G R
Sbjct: 205 VLIGGAGADRFLVFAGGGVDRILDFDVQEGDRLHLDAGLSYTLRQDGADTIVGLGGGQRV 264
Query: 421 AAAR 424
A
Sbjct: 265 VLAD 268
>gi|84686516|ref|ZP_01014409.1| hypothetical protein 1099457000254_RB2654_07486 [Maritimibacter
alkaliphilus HTCC2654]
gi|84665429|gb|EAQ11906.1| hypothetical protein RB2654_07486 [Rhodobacterales bacterium
HTCC2654]
Length = 2260
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 36/113 (31%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I + + I + + GS D++ GN ++ GND +G S
Sbjct: 49 IGTRHDDVIDKSDASRGQVIVGRQGDDDLTGSDIRDIINGNRGDDRIEGGGGNDFMNGGS 108
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVN 355
G DT + Y I ++ D L E L F D +
Sbjct: 109 GTDTAVFSGSILDYTISSNWWCNVITVRGPDGCDTLVGFEILEFDDYTFEIGG 161
Score = 41.7 bits (96), Expect = 0.36, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 4/113 (3%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + I +++ G++G+D+++G +++ F GND+ G G D F + A
Sbjct: 2132 GTSEADLIFGSDEGDTLGGAAGDDILMGFDGDDIIFGGVGNDIATGGLGADQFVFDAELG 2191
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
I ++ + L + AD + L ++
Sbjct: 2192 TETDVDT---IRDFELGVDGLNLLGGLTIASVAD-VDADGDSTVDDTLVTLSN 2240
>gi|254416848|ref|ZP_05030597.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196176394|gb|EDX71409.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 321
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 59/211 (27%), Gaps = 51/211 (24%)
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + ++G GND + G S N+ + SGND +G +G+DT Y
Sbjct: 6 GGRGNDRLIGGRGNDRLIGGRGNDRLWGGSGNDRLWGGSGNDTLNGGTGIDTADYSNLGQ 65
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC------------------------ 350
+ V + D + +E++ A
Sbjct: 66 AITLESVG----VINKGSAGTDQIQFIEKIIGATGQANAIDGSTGRSKSTSLDIDLSANN 121
Query: 351 -------------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
I+ Q + ++ L+ G D
Sbjct: 122 LTVNGIPGIGKATFTIENFINVTGTSQNDTIIGNSADNLLVGGSGNDTLIGGSGNDRLVG 181
Query: 392 SEGRDITF----DSYLYLGSYDDLRNVFGSD 418
+G D+ + L G +D+ +
Sbjct: 182 GDGNDVLTGGSGNDRLVGGDGNDVLTGGSGN 212
Score = 58.6 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 76/246 (30%), Gaps = 11/246 (4%)
Query: 102 INFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTS 161
I D G G ++ + G +G + G D+ S
Sbjct: 5 IGGRGNDRLIGGRGNDRLIGGRGNDRLWGGSGNDRLWGGSGNDTLNGGTG---IDTADYS 61
Query: 162 VMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN----IYKIEVQQKDSP 217
+ + +S+ + G T + I + G G+ +++ +
Sbjct: 62 NLGQAITLESVGVINKGSAGTDQIQFIEKIIGATGQANAIDGSTGRSKSTSLDIDLSANN 121
Query: 218 FIQTIYDSGGDDLLDLTLI----GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG 273
G + G +N + + + + G N T+ + + +VG
Sbjct: 122 LTVNGIPGIGKATFTIENFINVTGTSQNDTIIGNSADNLLVGGSGNDTLIGGSGNDRLVG 181
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GNDV+ G S N+ GNDV G SG D + + + I +
Sbjct: 182 GDGNDVLTGGSGNDRLVGGDGNDVLTGGSGNDKLTGGSGNDWFTFNSKNEGIDTISDFDV 241
Query: 334 KQDFLS 339
+D +
Sbjct: 242 HRDLIR 247
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/310 (13%), Positives = 79/310 (25%), Gaps = 21/310 (6%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE-FGLSEGRDI 397
+RL + + L + + L G D + G+ I
Sbjct: 8 RGNDRLIGGRGNDRLIGGRGNDRLWGGSGNDRLWGGSGNDTLNGGTGIDTADYSNLGQAI 67
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
T +S + G+D+ I + + + + DL
Sbjct: 68 TLESVGVINKG-----SAGTDQIQFIEKIIGATGQANAIDGSTGRSKSTSLDIDLSANNL 122
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ +GK F+ + + + S D+L + G
Sbjct: 123 TVNGIPGIGKATFTIENFINVTGTSQNDTIIGNSADNLLVGGSGNDTL----IGGSGNDR 178
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD 577
D L + ++ L+ + +G D G TFN
Sbjct: 179 LVGGDGNDVLTGGSGNDRLVGGDGNDVLTGGSGND--KLTGGSGNDWFTFNSK---NEGI 233
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKV 637
D + F R G + + +F ++ ++
Sbjct: 234 DTISDFDVHRDLIRVDDRGFGGRLR-RGTLDSSKFTLG-----SRARDSNDRFIYNKSTG 287
Query: 638 DLYTDYFGDG 647
DL+ D G G
Sbjct: 288 DLFFDTDGTG 297
>gi|149202112|ref|ZP_01879085.1| Hemolysin-type calcium-binding region, RTX [Roseovarius sp. TM1035]
gi|149144210|gb|EDM32241.1| Hemolysin-type calcium-binding region, RTX [Roseovarius sp. TM1035]
Length = 263
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 55/218 (25%), Gaps = 3/218 (1%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
T+S + G I +++ G GND + GN + +GND G G D
Sbjct: 6 GTDSADRLVGTAFADQITGLDGNDTIFGGGGNDAINGNDDGDRLDGGAGNDTIAGGKGED 65
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQ-DFLSDVERLRFADQCIDSVNVKQRSILEY 364
T ++ ++ + D +RL + +
Sbjct: 66 TLL--GGLGNDRLTDESGDDRLFGGDGDDTLDAGEGNDRLDGGTGNDRMFGGEGNDTMNG 123
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ + G DV + EG D+ N F
Sbjct: 124 GTGNDVMHGGSGDDVMNAGAGADRLFGGEGNDVMRGGGGRDVLSGGEGNDFIDGGHGNDL 183
Query: 425 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
G + +D I+ +
Sbjct: 184 MTGGVGADTFVFKFGRDVITDFEPGDDQIDLTGISGLN 221
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 46/202 (22%), Gaps = 10/202 (4%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+ D ++G + + GND G G D ++ +
Sbjct: 3 RLTGTDSADRLVGTAFADQITGLDGNDTIFGGGGNDAI--NGNDDGDRLDGGAGNDTIAG 60
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
L + L + L G D +
Sbjct: 61 GKGEDT--------LLGGLGNDRLTDESGDDRLFGGDGDDTLDAGEGNDRLDGGTGNDRM 112
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
EG D + + + A R + G R L +
Sbjct: 113 FGGEGNDTMNGGTGNDVMHGGSGDDVMNAGAGADRLFGGEGNDVMRGGGGRDVLSGGEGN 172
Query: 450 EDLINAFADAPDLVQVGKDHFS 471
+ + + VG D F
Sbjct: 173 DFIDGGHGNDLMTGGVGADTFV 194
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 44/138 (31%), Gaps = 5/138 (3%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKN 259
+ + T+ G+D LD + GG N + G +
Sbjct: 77 TDESGDDRLFGGDGDDTLDAGEGNDRLDGGTGNDRMFGGEGNDTMNGGTGNDVMHGGSGD 136
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + + G GNDV+ G +V GND DG G D + +
Sbjct: 137 DVMNAGAGADRLFGGEGNDVMRGGGGRDVLSGGEGNDFIDGGHGNDLMTGGVGADTFVFK 196
Query: 320 RFENAIIVYDANEHKQDF 337
+ I ++ + + D
Sbjct: 197 FGRDVITDFEPGDDQIDL 214
>gi|114640111|ref|XP_001154066.1| PREDICTED: matrix metalloproteinase 3 isoform 3 [Pan troglodytes]
Length = 468
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 52/190 (27%), Gaps = 50/190 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 109 WRKTHLTYRIVNYTPDLPK-------DAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMI 161
Query: 73 ---TSIHSDIK-FISSNN--GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
H D F N + P + +FD + W GT L A H
Sbjct: 162 SFAVREHGDFYPFDGPGNVLAHAYAP--GPGINGDAHFDDDEQWTKDT-TGTNLFLVAAH 218
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
EIGH+LGL H S T + Y + F
Sbjct: 219 EIGHSLGLFH--------------------SANTEALMYPLYHSLTDLTRFRLSQ----D 254
Query: 187 DIVAVQKIYG 196
DI +Q +YG
Sbjct: 255 DINGIQSLYG 264
>gi|33865518|ref|NP_897077.1| putative secreted calcium-binding protein [Synechococcus sp. WH
8102]
gi|33632687|emb|CAE07499.1| putative secreted calcium-binding protein [Synechococcus sp. WH
8102]
Length = 209
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 50/175 (28%), Gaps = 19/175 (10%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ + GG + + +S I N TI + ++G G D++ G + N+
Sbjct: 6 VEITGGSGSNVVYADDSAQIIVLGGGNDTIGSAGGDDLLIGGRGQDLITGGADNDTLKGG 65
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
D+ G G D QD L +
Sbjct: 66 PQTDLLFGGQGRDHL-------------NAGRGDDTLKGGRGQDTLRG------SSGDDL 106
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
L + + L GQD K F LS+G D D + G
Sbjct: 107 LKGQLYHDSLHGGSGDDTLFGGKGQDTLTGAKGSDTFKLSKGNDTIRDFSITEGD 161
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 56/164 (34%), Gaps = 8/164 (4%)
Query: 176 SFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL 235
+ G + + +D A + G ++G + I +D L
Sbjct: 9 TGGSGSNVVYADDSAQIIVLGGGNDTIG--SAGGDDLLIGGRGQDLITGGADNDTLK--- 63
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
GG + + + + + T+ +++ GSSG+D++ G ++ SG+
Sbjct: 64 -GGPQTDLLFGGQGRDHLNAGRGDDTLKGGRGQDTLRGSSGDDLLKGQLYHDSLHGGSGD 122
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
D G G DT + + D + + D ++
Sbjct: 123 DTLFGGKGQDTL--TGAKGSDTFKLSKGNDTIRDFSITEGDLIN 164
>gi|91976039|ref|YP_568698.1| heme peroxidase [Rhodopseudomonas palustris BisB5]
gi|91682495|gb|ABE38797.1| Animal haem peroxidase [Rhodopseudomonas palustris BisB5]
Length = 3094
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/238 (13%), Positives = 65/238 (27%), Gaps = 20/238 (8%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYE 257
G V + +P + GDD + D + + +
Sbjct: 2788 GTTPPVGGVIRTGTPQPDVLVGGAGDDNIVAFADDDVIAADAGADAISAGDGNDFVTAGA 2847
Query: 258 KNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
I + V G D++ G++ + F GND+ + +G D F A + L
Sbjct: 2848 GRDVIFAGAGNDQVFAGDGADMIYGDAGADRIFGHQGNDLINAGAGDDIVFGGAGNDLIV 2907
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA------SYEDL 371
+ + Y + S ++ L + + L + + + L
Sbjct: 2908 AELSDGNDVYYGDDSEGG---SGIDTLDLSAATANVTVNLGSGPLFHGSASGSQTGNDTL 2964
Query: 372 IQ------VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
G D + G D + + D + + DR
Sbjct: 2965 WSIENVYTGSGNDTITASNAVNVISGGTGNDTFRFTSTSAANGDTILDFEPGDRIDLT 3022
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 45/127 (35%), Gaps = 15/127 (11%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G+ G+D +I + ++ + +G+D + +G+D + I+ D+ +
Sbjct: 976 GTDGDDTIITDFGDDGIWGDAGDDRIESGAGVD-----------LVNGGAGNDIITDSGD 1024
Query: 333 HKQDFLSDVE---RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
DFL E + ++ + + ++ ++ G D
Sbjct: 1025 TG-DFLKGDEGDDVIANSNGIDILMGGSGKDVVFVGVDDTEVFAGEGDDFVLGGDGVDFL 1083
Query: 390 GLSEGRD 396
+EG D
Sbjct: 1084 LGNEGDD 1090
Score = 39.8 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 44/137 (32%), Gaps = 6/137 (4%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV-- 267
DSPF T+ + + G V S +V
Sbjct: 1745 NDTDSDSPFAITVVNGANNLTATRPAGGPVTITDTGTINGGSFNYTVSDGFATDPASVQV 1804
Query: 268 ----IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++ G++G D+++G+ A N+ + ND+ +G DT + A S +
Sbjct: 1805 VRDTTGAINGNNGVDILVGDGAANILEGAGSNDLIFAGAGDDTINWTATSIGGVDIANDG 1864
Query: 324 AIIVYDANEHKQDFLSD 340
V F+ +
Sbjct: 1865 RDFVDGGAGTLDRFVVN 1881
>gi|300866945|ref|ZP_07111617.1| hypothetical protein OSCI_3180021 [Oscillatoria sp. PCC 6506]
gi|300335049|emb|CBN56779.1| hypothetical protein OSCI_3180021 [Oscillatoria sp. PCC 6506]
Length = 305
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 61/188 (32%), Gaps = 10/188 (5%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
ID S+ + G N T+ +++ G GND++ GN ++ + G D G
Sbjct: 4 IDGTP-SFDFLQGTLNNDTLRGLAGNDTIQGLGGNDLIFGNQDSDSVIGNEGADTLFGGQ 62
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G DTF+ I + + L D S I
Sbjct: 63 GNDTFY--GSEGNDIINGDRGQDFLIGGEGTDILTGGVGDDLFVLDTAGASSLADADKIT 120
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD--SYLYLGSYDDLRNVFGSDRG 420
++ + L+ G + + L+EG + D + YL + N+ S+
Sbjct: 121 DFGNGNDRLVLTGGLKFND-----LDIFLTEGNAVVKDRLTGKYLAVLQGVNNLIDSNFI 175
Query: 421 AAARHYIT 428
+
Sbjct: 176 SLIGGIEQ 183
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 9/141 (6%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ + T+ G+D + G N + + S+ G E T+ ++
Sbjct: 11 DFLQGTLNNDTLRGLAGNDTI----QGLGGNDLIFGNQDSDSVIGNEGADTLFGGQGNDT 66
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
GS GND++ G+ + G D+ G G D F +
Sbjct: 67 FYGSEGNDIINGDRGQDFLIGGEGTDILTGGVGDDLFVLDTAGASSLADADK-----ITD 121
Query: 331 NEHKQDFLSDVERLRFADQCI 351
+ D L L+F D I
Sbjct: 122 FGNGNDRLVLTGGLKFNDLDI 142
>gi|197104758|ref|YP_002130135.1| endo-1,3-1,4-beta glycanase [Phenylobacterium zucineum HLK1]
gi|196478178|gb|ACG77706.1| endo-1,3-1,4-beta glycanase [Phenylobacterium zucineum HLK1]
Length = 685
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 57/208 (27%), Gaps = 11/208 (5%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++V + + G A + G+D G G D Y S+ + I
Sbjct: 482 NLVAPAEGSFLQGGGAADTLQGGGGSDTLRGGDGAD-LIYGGDSFDDTHGNWGEDTIYGG 540
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+RL D + L+ A + + G D+ +
Sbjct: 541 GGGDWVVGGQGNDRLFGEDGGDAVLGNLGNDTLDGGAGNDVVRGGQGHDLIQGGDGDDFI 600
Query: 390 GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS- 448
G D G+ D+ + F +GA + EG + S
Sbjct: 601 AGDRGDDTL-----SGGAGADVFHSF---QGAGLDRILDFNAAEGDRVQVLAGTPWSVSQ 652
Query: 449 -HEDLINAFADAPDLVQVGKDHFSNFGC 475
D + +V VG ++
Sbjct: 653 VGADTVVTLGAGDAIVLVGVSAYALPEG 680
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 8/149 (5%)
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+Q G+ G+ + + G+D + G N
Sbjct: 501 LQGGGGSDTLRGGDGA----DLIYGGDSFDDTHGNWGEDTIYGGGGGDWVVGGQGN---- 552
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ G + + + +++ G +GNDVV G +++ G+D G G DT
Sbjct: 553 DRLFGEDGGDAVLGNLGNDTLDGGAGNDVVRGGQGHDLIQGGDGDDFIAGDRGDDTLSGG 612
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLS 339
A + ++ ++ + D N + D +
Sbjct: 613 AGADVFHSFQGAGLDRILDFNAAEGDRVQ 641
>gi|149916042|ref|ZP_01904565.1| Animal haem peroxidase [Roseobacter sp. AzwK-3b]
gi|149810116|gb|EDM69964.1| Animal haem peroxidase [Roseobacter sp. AzwK-3b]
Length = 2197
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 67/244 (27%), Gaps = 23/244 (9%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + I ++ G + + + ++ G +GND++ + G+D
Sbjct: 1452 GTDQRDILNGGLGDDALWGGAGDDLLIGDAGVNTLRGGAGNDILKDGDDVSFLHGEDGDD 1511
Query: 297 VF----------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER-LR 345
V G G D + + +Y + F + + +
Sbjct: 1512 VISAGGGIGELMFGGKGND-AILMGSDDAATAFGMDGNDFIYGGAGGEFMFGGEGDDWIE 1570
Query: 346 FADQCIDSVNVKQR----------SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D + +L+ A+ DL+ G D+ + + G
Sbjct: 1571 GGDGFDMVMGDNGDPFGGSRVVGHDVLDGGANDNDLLGEGGDDILIQREGVHVNEGDLGF 1630
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
D G+ DL ++ AA + + E + F Y E
Sbjct: 1631 DWVAHKDAMTGADIDLSRRLETNETQAALR-DRYDLVEAASGTQFDDFLYGDDREGAALP 1689
Query: 456 FADA 459
Sbjct: 1690 DGID 1693
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 53/171 (30%), Gaps = 9/171 (5%)
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
G T + D+ A Y + G+ + FI I + D T
Sbjct: 1812 GQEGDVDTAVYFDVRAN---YNIRTNADGSVTVDHIAPPIEGAFIDPINGQPNVEGGDGT 1868
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ N I + + GS+G D + + N+V +G
Sbjct: 1869 DRLTNVEILRFADMEIDLRTDPASNGLIQGTDGDDVLNGSNGRDAIFAGAGNDVINGLAG 1928
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRF------ENAIIVYDANEHKQDFLS 339
NDV G G DT + AP+ Y + ++ + +D +
Sbjct: 1929 NDVIFGEGGSDTITWNAPNGGYDVVVGHGIVNDGGTDMLVINGDGTEDGFT 1979
Score = 37.5 bits (85), Expect = 7.4, Method: Composition-based stats.
Identities = 46/313 (14%), Positives = 94/313 (30%), Gaps = 35/313 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+D + + + + + DV G TI + G+ + +
Sbjct: 1898 GTDGDDVLNGSNGRDAIFAGAGNDVINGLAGNDVIFGEGGSDTITWNAPNG--GYDVVVG 1955
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
H +GG + ++ D D F ++ + Q + +S + A+ ++
Sbjct: 1956 HGIVNDGGTDMLVINGDGTEDGFTMYTVAAWTGQAPVDPSSEIIITRTVAGVETAIMEVR 2015
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + + I+TI G D N I +N + +
Sbjct: 2016 GIEEVA-----------INGVQGIETINAVG-----DFAGTSLAPNTIYVNGTAGREVID 2059
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-----------GSSGL 304
+ + + V G DV+ G + N++ +G+D G +G
Sbjct: 2060 FSGFTSTQRLVVD----AGDGRDVITGGAGNDILNAGAGDDEITWSVGGGSDVVDGGAGE 2115
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
DT+ + + + + R A + + I
Sbjct: 2116 DTYTINGDASDETFRVYAA--DSWTGAPLATGTDIVITRDAGAGEQVIGQLQNIEEIQIN 2173
Query: 365 TASYEDLIQVIGQ 377
TA D ++VIG
Sbjct: 2174 TAGGVDNVEVIGD 2186
>gi|3550075|gb|AAC34604.1| matrix metalloproteinase-13 [Gallus gallus]
Length = 378
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 58/197 (29%), Gaps = 51/197 (25%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WSN + Y+ T+ + + A WS V L F S +
Sbjct: 16 RKLKWSNTNLTYRIMSYTSDLR-------RAEVERAFKRAFKVWSDVTPLNFTRIRSGTA 68
Query: 78 DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + P Y + +FD + W +G L
Sbjct: 69 DIMISFGTKEHGDFYPFDGPSGLLAHAFPP--GPDYGGDAHFDDDETWS-DDSRGYNLFL 125
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH+LGL H + + +Y + F
Sbjct: 126 VAAHEFGHSLGLEHSRDPGA---------------LMFPIYTYT------GKSGFVLPD- 163
Query: 183 PMVSDIVAVQKIYGAPK 199
D+ +Q++YGA
Sbjct: 164 ---DDVQGIQELYGAGD 177
>gi|323139736|ref|ZP_08074774.1| glycosyl transferase group 1 [Methylocystis sp. ATCC 49242]
gi|322395007|gb|EFX97570.1| glycosyl transferase group 1 [Methylocystis sp. ATCC 49242]
Length = 776
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 11/86 (12%)
Query: 482 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAF 540
FD Y Y DL ++ D HY G +E R+P A F Y+ ++D+ A
Sbjct: 29 GFDPVFYRFLYPDLEHL---DDEKLLAHYNEIGWREYRDPCAWFSTAFYLKRYQDVQGA- 84
Query: 541 ADAPDLVQAGKDHFSNFGYEEGRSIT 566
H+ G EGR +
Sbjct: 85 ------GLNPFYHYLTHGRGEGRLPS 104
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 12/84 (14%)
Query: 522 DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYDDL 579
D F + Y + DL + H++ G+ E R F+ YL Y D+
Sbjct: 28 DGFDPVFYRFLYPDL------EHLDDEKLLAHYNEIGWREYRDPCAWFSTAFYLKRYQDV 81
Query: 580 WNVFGSDRSAAAQHYITHGMKEGR 603
HY+THG EGR
Sbjct: 82 QGA----GLNPFYHYLTHGRGEGR 101
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 12/88 (13%)
Query: 438 DAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDL 495
D F + Y + DL + H++ G E R F + YL Y D+
Sbjct: 28 DGFDPVFYRFLYPDL------EHLDDEKLLAHYNEIGWREYRDPCAWFSTAFYLKRYQDV 81
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDA 523
+ + HY+THG EGR P
Sbjct: 82 QGAGLN----PFYHYLTHGRGEGRLPSN 105
Score = 43.2 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT--FDSYLYLGSY 408
+D++ + Y Y DL + D + + H+ E G E RD F + YL Y
Sbjct: 22 VDALIKDGFDPVFYRFLYPDLEHL---DDEKLLAHYNEIGWREYRDPCAWFSTAFYLKRY 78
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
D++ HY+THG EGR P
Sbjct: 79 QDVQGA----GLNPFYHYLTHGRGEGRLPSN 105
>gi|291520013|emb|CBK75234.1| Uncharacterized vancomycin resistance protein [Butyrivibrio
fibrisolvens 16/4]
Length = 290
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYDDLWN 581
F Y A + +L + H++ G EGR S TFN Y+ DL
Sbjct: 49 FDGAYYAAMYPNLAQQANGDQLWL---LMHYAYCGINEGRNASATFNATDYMNKNPDLVA 105
Query: 582 VFGSDRSAAAQHYITHGMKEGRALGIS 608
V+G A A HY+ G EGR +
Sbjct: 106 VYGDYMPAYAFHYVYAGRLEGRDATPT 132
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYDDLR 496
F Y A + +L + H++ G EGR TF++ Y+ DL
Sbjct: 48 VFDGAYYAAMYPNLAQQANGDQLWL---LMHYAYCGINEGRNASATFNATDYMNKNPDLV 104
Query: 497 NVFGSDRGAAARHYITHGVKEGRNPDA 523
V+G A A HY+ G EGR+
Sbjct: 105 AVYGDYMPAYAFHYVYAGRLEGRDATP 131
Score = 45.9 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI--TFDSYLYLGSYDDLRNVF 415
Y A Y +L Q D + H+ G++EGR+ TF++ Y+ DL V+
Sbjct: 48 VFDGAYYAAMYPNLAQQANGDQLWLLMHYAYCGINEGRNASATFNATDYMNKNPDLVAVY 107
Query: 416 GSDRGAAARHYITHGVKEGRNPDAF 440
G A A HY+ G EGR+
Sbjct: 108 GDYMPAYAFHYVYAGRLEGRDATPT 132
>gi|6572429|emb|CAA58520.2| MT-MMP [Mus musculus]
Length = 582
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + +
Sbjct: 167 IREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSNDPSDIMSPFYQWMDTEN 268
>gi|4505217|ref|NP_002413.1| stromelysin-1 preproprotein [Homo sapiens]
gi|116857|sp|P08254|MMP3_HUMAN RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
metalloproteinase-3; Short=MMP-3; AltName:
Full=Transin-1; Flags: Precursor
gi|15294140|gb|AAK95247.1|AF405705_1 matrix metalloproteinase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|36633|emb|CAA28859.1| preprostromelysin [Homo sapiens]
gi|50960572|gb|AAH74815.1| Matrix metalloproteinase 3, preproprotein [Homo sapiens]
gi|77567646|gb|AAI07492.1| Matrix metalloproteinase 3, preproprotein [Homo sapiens]
gi|119587436|gb|EAW67032.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|189053854|dbj|BAG36115.1| unnamed protein product [Homo sapiens]
Length = 477
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 54/195 (27%), Gaps = 50/195 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 109 WRKTHLTYRIVNYTPDLPK-------DAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMI 161
Query: 73 ---TSIHSDIK-FISSNN--GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
H D F N + P + +FD + W GT L A H
Sbjct: 162 SFAVREHGDFYPFDGPGNVLAHAYAP--GPGINGDAHFDDDEQWTKDT-TGTNLFLVAAH 218
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
EIGH+LGL H S T + Y + F
Sbjct: 219 EIGHSLGLFH--------------------SANTEALMYPLYHSLTDLTRFRLSQ----D 254
Query: 187 DIVAVQKIYGAPKGS 201
DI +Q +YG P S
Sbjct: 255 DINGIQSLYGPPPDS 269
>gi|148692667|gb|EDL24614.1| matrix metallopeptidase 19, isoform CRA_b [Mus musculus]
Length = 508
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 59/197 (29%), Gaps = 46/197 (23%)
Query: 15 DHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS 74
+LL + +V +T L P + A WS V LTF E
Sbjct: 79 KYLLLGHWRKKNLTFRIFNVPSTLSL--------PRVRAALHQAFKYWSSVAPLTFREVK 130
Query: 75 IH-SDIKFISSNNGYVCTPRYDSRYF-----------MEINFDKADVWRYGIGKGTILSH 122
+DI+ + I+FDK ++W G +G L
Sbjct: 131 AGWADIRLSFHGRQSLYCSNTFDGPGKVLAHADIPELGSIHFDKDELWTEGTYQGVNLRI 190
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE+GHALGL H Y + + A +
Sbjct: 191 IAAHEVGHALGLGH--------------------------SRYTQALMAPVYAGYQPFFK 224
Query: 183 PMVSDIVAVQKIYGAPK 199
D+ +Q +YG
Sbjct: 225 LHPDDVAGIQALYGKRS 241
>gi|254423046|ref|ZP_05036764.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196190535|gb|EDX85499.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 675
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 4/131 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ ++ D+L GG N + + ++ G N +
Sbjct: 515 GNDFLEGGNGKDVLFGGDDRDILI----GGRSNDTLFGEQGFDTLSGGSGNDLLNGGNGK 570
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G + ND +IG + + G D+ G +G DTF I F + ++
Sbjct: 571 DILSGGADNDTLIGEAGKDTLIGDRGKDMLTGGAGEDTFVLALGEGTDTITDFSSEDLIG 630
Query: 329 DANEHKQDFLS 339
AN LS
Sbjct: 631 LANGLGIGELS 641
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 6/133 (4%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + + G+D L GG + + + G N T+
Sbjct: 497 WDDMLIGTRRKNIFFGQAGND----FLEGGNGKDVLFGGDDRDILIGGRSNDTLFGEQGF 552
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+++ G SGND++ G + ++ + ND G +G DT +
Sbjct: 553 DTLSGGSGNDLLNGGNGKDILSGGADNDTLIGEAGKDTLI--GDRGKDMLTGGAGEDTFV 610
Query: 329 DANEHKQDFLSDV 341
A D ++D
Sbjct: 611 LALGEGTDTITDF 623
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 45/163 (27%), Gaps = 10/163 (6%)
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ ++G+ ++ G + N+ +G DV G D ++ +
Sbjct: 493 YGTDWDDMLIGTRRKNIFFGQAGNDFLEGGNGKDVLFGGDDRDILI--GGRSNDTLFGEQ 550
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFES 382
+ + D L+ + L A + LI G+D+
Sbjct: 551 GFDTLSGGS--GNDLLNG------GNGKDILSGGADNDTLIGEAGKDTLIGDRGKDMLTG 602
Query: 383 MKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
F L+ G + L N G + +
Sbjct: 603 GAGEDTFVLALGEGTDTITDFSSEDLIGLANGLGIGELSFVGN 645
>gi|297690063|ref|XP_002822449.1| PREDICTED: stromelysin-2-like [Pongo abelii]
Length = 476
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 59/196 (30%), Gaps = 50/196 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W ++ Y+ T AL W +V LTF +DI
Sbjct: 108 WRKTYLTYRIVNYTPDLP-------RDAVDSAIEKALRVWEEVTPLTFSRLYEGEADIMI 160
Query: 82 ISS---------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ + + P + +I+FD + W GT L A H
Sbjct: 161 SFAFKEHGDFYSFDGPGHSLAHAYPP--GPGLYGDIHFDDDEKWTED-ASGTNLFLVAAH 217
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H N +Y + N + S
Sbjct: 218 ELGHSLGLFHSA--NTEALMYPLYNSFTELSR----------------------FRLSQD 253
Query: 187 DIVAVQKIYGAPKGSL 202
D+ +Q +YG P S
Sbjct: 254 DVNGIQSLYGPPPAST 269
>gi|85704987|ref|ZP_01036087.1| type I secretion target repeat protein [Roseovarius sp. 217]
gi|85670309|gb|EAQ25170.1| type I secretion target repeat protein [Roseovarius sp. 217]
Length = 750
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 75/244 (30%), Gaps = 21/244 (8%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDK-ADVWRYGIGKGTILSHNALHEIGHA 131
+ D+ +SN+ + ++ F Y G + +
Sbjct: 59 AAGALDMNNTASNDQFSTDIGSGTQTFTFDGLSTFNATLTYTDGTTASFLAILVQDTNGN 118
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
L L P + + F ++ + + G + D V
Sbjct: 119 LFLAPP-----LNTTPANAANIAAMTARPIESVTFNSVNTSTNTNLGADRADIGIDDGIV 173
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Q GA + G Y V GG+D + I+ + +
Sbjct: 174 QGTGGADLINSG---YTEPVASGSDRVDNNDAPGGGND-----------DVINAGAGNDT 219
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+ G N ++ T +S+ G SGND ++G + +G+D DG +G DT +
Sbjct: 220 VLAGL-GNDSVQGGTGADSLSGESGNDTLLGEGGTDTLIGGAGDDSLDGGTGNDTLYGDG 278
Query: 312 PSYL 315
+
Sbjct: 279 GTAA 282
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 48/455 (10%), Positives = 110/455 (24%), Gaps = 19/455 (4%)
Query: 103 NFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSV 162
++ + + G A L + + D +F
Sbjct: 32 FVNRTYGTAIDPLYQNVTRVTTIDNGGAAGALD--MNNTASNDQFSTDIGSGTQTFTFDG 89
Query: 163 MSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY---GAPKGSLGNNIYKIEVQQKDSPFI 219
+S F + D + +V D + + N + F
Sbjct: 90 LSTFNATLTYTDGTTASFLAILVQDTNGNLFLAPPLNTTPANAANIAAMTARPIESVTFN 149
Query: 220 QTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES-VVGSSGND 278
+ + D IG + + GY + + V + G +D
Sbjct: 150 SVNTSTNTNLGADRADIGIDDGIVQGTGGADLINSGYTEPVASGSDRVDNNDAPGGGNDD 209
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA-NEHKQDF 337
V+ + N+ GND G +G D+ S + + + D
Sbjct: 210 VINAGAGNDTVLAGLGNDSVQGGTGADSL--SGESGNDTLLGEGGTDTLIGGAGDDSLDG 267
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ + L + + + +A+ + G ++ +
Sbjct: 268 GTGNDTLYGDGGTAARWSYQVYTRDFTSANGQAFDIESGTLAGSGTSAAFDVTGHGQQAT 327
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
G + +D G + + + +
Sbjct: 328 GQGDPNDYGVIYSSNLIATADGVYRFATTSDDGSTVRILDSNGDPVTFTNQNGTTGSFLD 387
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ + E G+ T + + ++ + + G A + T +
Sbjct: 388 NDFHQG--ATTRWGEVTLEAGQSYTIEVRYWENLGGNVLSGTVTLPGGAVQDLATSPLIV 445
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G + IA ++ L + G D
Sbjct: 446 GSDS--------IAGNDYLDGGAGADLLFGEGGTD 472
Score = 45.9 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 39/351 (11%), Positives = 81/351 (23%), Gaps = 29/351 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ +S + D G G ++ + G SY
Sbjct: 231 GGTGADSLSGESGNDTLLGEGGTDTLIGGAGDDSLDGGTGNDTLYGDGGTAARWSYQVYT 290
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ N D ++ + D + D IY + + +
Sbjct: 291 RDFTSANGQAFDIESGTL--AGSGTSAAFDVTGHGQQATGQGDPNDYGVIYSSNLIATAD 348
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+Y+ D ++ + +G S+ ++ T
Sbjct: 349 GVYRFATTSDDGSTVRILDSNGDPVTFTNQNGTT---------GSFLDNDFHQGATTRWG 399
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+E+ + N NV + G + D I +
Sbjct: 400 EVTLEAGQSYTIEVRYWENLGGNVLSGTV---TLPGGAVQDLATSPLIVGSDSIAGND-- 454
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
Y D L F + D++ + L + + E+
Sbjct: 455 ---YLDGGAGADLL-------FGEGGTDTLIAGENDTLYGGDGDDLFVIGS---PAETGT 501
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
EG + D+ F + AA + + +G
Sbjct: 502 GTITIVGGEGSETGGDTLFLSPEARKADITFSNPDDAAGGLSGSFTLTDGT 552
>gi|254733133|gb|ACT79986.1| ApxIVA [Actinobacillus pleuropneumoniae]
Length = 1951
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/350 (14%), Positives = 89/350 (25%), Gaps = 66/350 (18%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + +GND + G+ ++ +GND+ GS G DT+ +
Sbjct: 1499 LFGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYLFSKG 1558
Query: 313 SYLYKIYRFEN--------------------------AIIVYDANEHKQDFLSD------ 340
IY + + + H D ++
Sbjct: 1559 HGQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVGDDLMLFGYHDTDSVTGKSFYDH 1618
Query: 341 ----VERLRFADQCID----------SVNVKQRSILEYTASYED-LIQVIGQDVFESMKH 385
E+L FAD+ I + A ++ L G D+
Sbjct: 1619 EYYQFEKLEFADRSISRDELIKAGLHLYGTDGNDEINDHADWDSILEGGKGNDILRGSYG 1678
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
+ S+G + Y D N S R + E + L
Sbjct: 1679 ADTYIFSKGH-----GQDVIYEYSDSAN---SKRDIDTLKFTDVNYAEVKFRRVDNDLML 1730
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
H F + R +T D +FG+D
Sbjct: 1731 FGYH---DTDLVTVKSFYSHVDYKFDKLEFAD-RSITRDELG-----KQGMALFGTDGDD 1781
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ + + + LI A + G D +
Sbjct: 1782 NINDWGRN--SVIDAGAGNDTVNGGNGDDTLIGAKGNDILRGGYGADTYI 1829
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 82/634 (12%), Positives = 162/634 (25%), Gaps = 102/634 (16%)
Query: 66 VDLTFEETSI---HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ F E++ + + + I + D + G T L
Sbjct: 1077 AGVIFAESTDLKGDEKNNILLGSQKDNNLSGSAGD-DLLIGGEGNDTLKGSYGADTYLFS 1135
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
G ++ + D+ + ++Y +
Sbjct: 1136 KG------------HGQDVIYEYSDSANSKSDIDTLKFTDVNYAEVKFR----------- 1172
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
V D + + +G + ++ D G +
Sbjct: 1173 -RVGDDLML---FGYHDTDSVTVKSFYNHEYYQFEKLEF------ADRSITRDELGKQGM 1222
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DG 300
T+ I + +N I +++ GS G+D +IG + N++ S G D +
Sbjct: 1223 ALFGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYLFSK 1282
Query: 301 SSGLDTFFYYAPSYL---------------YKIYRFENAIIVYDANEHKQDFLSD----- 340
G D + Y+ S ++ + H D ++
Sbjct: 1283 GHGQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVGDDLMLFGYHDTDSVTGKSFYD 1342
Query: 341 -----VERLRFADQCID----------SVNVKQRSILEYTASYED-LIQVIGQDVFESMK 384
E+L FAD+ I + A ++ L G D+
Sbjct: 1343 HEYYQFEKLEFADRSISRDELIKAGLHLYGTDGNDEINDHADWDSILEGGKGNDILRGSY 1402
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ S+G + Y D N S R + E + L
Sbjct: 1403 GADTYIFSKGH-----GQDVIYEYSDSAN---SKRDIDTLKFTDVNYAEVKFRRVGDDLM 1454
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
H+ D+ + + F E + +FG+D
Sbjct: 1455 LFGYHD------TDSVTVKSFYNHEYYQFEKLEFADRSITRDELGKQG---MALFGTDGD 1505
Query: 505 AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS 564
+ + + + LI + G D + F G+
Sbjct: 1506 DDINDWGRN--SVIDAGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYL-FSKGHGQD 1562
Query: 565 ITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG-----MKEGRALGISGMQFKSVMNLS 619
+ + S D+ + +D + A + G ++G F
Sbjct: 1563 VIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVGDDLMLFGYHDTDSVTGKSFYDHEYYQ 1622
Query: 620 EKSRDKADLSLSFDH--KKVDLYTDYFGDGNYYD 651
+ + AD S+S D K G+ D
Sbjct: 1623 FEKLEFADRSISRDELIKAGLHLYGTDGNDEIND 1656
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 10/96 (10%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + +GND V G + ++ + GND+ G G DT+ +
Sbjct: 1774 LFGTDGDDNINDWGRNSVIDAGAGNDTVNGGNGDDTLIGAKGNDILRGGYGADTYIFSKG 1833
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+Y N D++ L+F D
Sbjct: 1834 HGQDIVYEDTNNDN----------RARDIDTLKFTD 1859
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/303 (14%), Positives = 84/303 (27%), Gaps = 55/303 (18%)
Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG--APKGSLGNN 205
G ND N S+ + D + + V Y A +
Sbjct: 1520 GAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYLFSKGHGQDVIYEYSDSANSKRDIDT 1579
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ +V + F + D D + G Y E + + +I++
Sbjct: 1580 LKFTDVNYAEVKFRRVGDDLMLFGYHDTDSVTGKSFYD---HEYYQFEKLEFADRSISRD 1636
Query: 266 TVIE---SVVGSSGNDVVIGN-SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+I+ + G+ GND + + +++ GND+ GS G DT+ + IY +
Sbjct: 1637 ELIKAGLHLYGTDGNDEINDHADWDSILEGGKGNDILRGSYGADTYIFSKGHGQDVIYEY 1696
Query: 322 ENAIIVYDANE--------------------------HKQDFLS----------DVERLR 345
++ + H D ++ ++L
Sbjct: 1697 SDSANSKRDIDTLKFTDVNYAEVKFRRVDNDLMLFGYHDTDLVTVKSFYSHVDYKFDKLE 1756
Query: 346 FADQCIDSV----------NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
FAD+ I + + G D ++G
Sbjct: 1757 FADRSITRDELGKQGMALFGTDGDDNINDWGRNSVIDAGAGNDTVNGGNGDDTLIGAKGN 1816
Query: 396 DIT 398
DI
Sbjct: 1817 DIL 1819
>gi|124005503|ref|ZP_01690343.1| S-layer-RTX protein [Microscilla marina ATCC 23134]
gi|123988937|gb|EAY28530.1| S-layer-RTX protein [Microscilla marina ATCC 23134]
Length = 507
Score = 62.9 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 219 IQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND 278
+Y +GGDD++ GG + + + G + N + + + + G ND
Sbjct: 67 NDQVYANGGDDVI----YGGKGDDYLQGNDGSDIVKGDQGNDKLYGGSGNDDLYGGKEND 122
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
+ G ++ + GND G +G D ++Y I A ++Y +
Sbjct: 123 DLYGQDGSDKLYGDKGNDKLYGGAGNDKYYYALYGGYDVIDDASGADVLYLQS 175
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 15/163 (9%)
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
Y Q + IY GDD L G + I + + G N +
Sbjct: 63 AYASNDQVYANGGDDVIYGGKGDDYL----QGNDGSDIVKGDQGNDKLYGGSGNDDLYGG 118
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGND-----------VFDGSSGLDTFFYYAPSY 314
+ + G G+D + G+ N+ + +GND V D +SG D + + +
Sbjct: 119 KENDDLYGQDGSDKLYGDKGNDKLYGGAGNDKYYYALYGGYDVIDDASGADVLYLQSIAK 178
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ + ++ + + + +A+ I S+N
Sbjct: 179 SQVSVSYSGSNVILNVPSGRVTIKNGSVETVYANGQIVSINSG 221
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 42/156 (26%), Gaps = 37/156 (23%)
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + + G+S ++ +I ++N+ + + G+DV G G D
Sbjct: 43 VYGTSGQDFLQGTSASEQIIAYASNDQVYANGGDDVIYGGKGDD---------------- 86
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
L+ D + L + +DL D
Sbjct: 87 ---------------------YLQGNDGSDIVKGDQGNDKLYGGSGNDDLYGGKENDDLY 125
Query: 382 SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ +G D + Y L +
Sbjct: 126 GQDGSDKLYGDKGNDKLYGGAGNDKYYYALYGGYDV 161
>gi|301627877|ref|XP_002943093.1| PREDICTED: matrix metalloproteinase-17, partial [Xenopus (Silurana)
tropicalis]
Length = 518
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 66/197 (33%), Gaps = 44/197 (22%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHS 77
L W + ++ + +S D++ + + AL WSK L F ET
Sbjct: 78 LSGSVWDKKLLTWRLENSPN-TMSQDVS------RTLIGTALAVWSKETQLQFRETREQP 130
Query: 78 DIK--FISSNNGYVCTPRYDSRYFMEINF------------DKADVWRYGIGKGTILSHN 123
DI+ F++ ++G F D + W Y +GT L
Sbjct: 131 DIRVEFVTGSHGDGYPFDGQGGTLGHAFFPGVGERAGETHMDADESWSYNTEEGTDLFAV 190
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A+HE GH+LGL H S S+M + + +
Sbjct: 191 AVHEFGHSLGLYHS-------------------SSENSIMKPYYQGTVGDPSRYRLP--- 228
Query: 184 MVSDIVAVQKIYGAPKG 200
D+ +Q +YG P
Sbjct: 229 -PDDVDGIQTLYGQPDS 244
>gi|330861498|emb|CBX71713.1| hypothetical protein YEW_DL14740 [Yersinia enterocolitica W22703]
Length = 485
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 58/217 (26%), Gaps = 21/217 (9%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G SGNDV+ + + G++ + G+ G D F A I V
Sbjct: 40 NLYGGSGNDVLKAGTQGSWLVGRGGSNTYVGNRGDDVFVISASDDPKNIKGNGGRDTVLI 99
Query: 330 ANEHKQDFL---SDVERLRFADQCIDSVNVKQRSIL-EYTASYEDLIQVIGQDVFESMKH 385
+ S V + D ++ S+ + L+ G DV
Sbjct: 100 VGKKAVTLNMARSGVTLAQGGDGDDVIISGGNNSVFIKGGRGNTTLVGGDGDDVLAGGIG 159
Query: 386 FYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
G+ + + +Y+ + + G G +
Sbjct: 160 KNTIIGGSGKAVIYAGPQGDTIYVAEQGSIIHAGG-------------GADKIYGGKGND 206
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG 478
+E + + + + + G
Sbjct: 207 VIEAGQGNALIDGGGGINVVSLHGTHADYIITRTDSG 243
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 75/231 (32%), Gaps = 35/231 (15%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN--- 283
G D D+ + GG + +++ G + + +A +++G SG V+
Sbjct: 119 GGDGDDVIISGGNNSVFIKGGRGNTTLVGGDGDDVLAGGIGKNTIIGGSGKAVIYAGPQG 178
Query: 284 ---------------SANNVFFESSGNDVF---------DGSSGLDTFFYYAPSYLYKIY 319
+ + GNDV DG G++ + Y I
Sbjct: 179 DTIYVAEQGSIIHAGGGADKIYGGKGNDVIEAGQGNALIDGGGGINVVSLHGTHADYIIT 238
Query: 320 RFENAIIVYD--ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ-VIG 376
R ++ + D A L ++++L F+D Q + + L G
Sbjct: 239 RTDSGYQIRDKVAGRDGTLALKNIQKLNFSDISAID---LQEDTIVPID--DVLTTNWHG 293
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
+ + S H D+ F+ L V G R +AA + +
Sbjct: 294 KPLSRSDVHLIRGANLLANDLRFNDKSVLRISAVSDGVGGRVRLSAAGNIV 344
Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 49/192 (25%), Gaps = 24/192 (12%)
Query: 191 VQKIYGAPKG--SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL--------DLTLIGGVK 240
+ G+ + G++++ I I +GG D + L +
Sbjct: 59 LVGRGGSNTYVGNRGDDVFVISASDDPKN----IKGNGGRDTVLIVGKKAVTLNMARSGV 114
Query: 241 NYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDG 300
I G ++ I ++VG G+DV+ G N SG V
Sbjct: 115 TLAQGGDGDDVIISGGNNSVFIKGGRGNTTLVGGDGDDVLAGGIGKNTIIGGSGKAVIYA 174
Query: 301 SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
DT + D + +
Sbjct: 175 GPQGDTIYV----AEQGSIIHAGGGADKIYGGKGNDV------IEAGQGNALIDGGGGIN 224
Query: 361 ILEYTASYEDLI 372
++ ++ D I
Sbjct: 225 VVSLHGTHADYI 236
>gi|222148479|ref|YP_002549436.1| hypothetical protein Avi_2007 [Agrobacterium vitis S4]
gi|221735467|gb|ACM36430.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 513
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 62/214 (28%), Gaps = 53/214 (24%)
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
++ + + +G ++ F Y+ ++ D+ + D H+ G +
Sbjct: 21 ANSIFSLKTVGKYGKQKESTLIFFDRDFYLNTYIDVHASGIDP-------IYHYVANGWK 73
Query: 477 EGRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK------------------ 516
EGR F+ + ++ L + A R Y ++ +
Sbjct: 74 EGRSPFQYFNVQAFSKAHPRLEALNVDLAQACIRLYGSYAWQSHIECFGIATDLCLPVSF 133
Query: 517 ---EGRNP--------DAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
E R D F A Y+ + D H+ ++G+ E R
Sbjct: 134 TSTERRRLRKKWTRYRDFFDAEFYLKEYPDTA-------MTPAGAFMHYMHWGFSEDRQP 186
Query: 566 --TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITH 597
F+ Y + S QH I
Sbjct: 187 RADFDGYYYRKAN------GLSRGQNPFQHCIES 214
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 62/205 (30%), Gaps = 33/205 (16%)
Query: 340 DVERLRFADQCIDSVN------VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
+V F+ + + + Y +Y D + G D H+ G E
Sbjct: 19 NVANSIFSLKTVGKYGKQKESTLIFFDRDFYLNTYID-VHASGIDPIY---HYVANGWKE 74
Query: 394 GRDI--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
GR F+ + ++ L + A R Y ++ + IA+
Sbjct: 75 GRSPFQYFNVQAFSKAHPRLEALNVDLAQACIRLYGSYAWQSHIE------CFGIATDLC 128
Query: 452 LINAFADAPDLVQVGKDH-FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY 510
L +F K + +F FD+ YL Y D A HY
Sbjct: 129 LPVSFTSTERRRLRKKWTRYRDF---------FDAEFYLKEYPDTAMT----PAGAFMHY 175
Query: 511 ITHGVKEGRNP-DAFKALEYIASHE 534
+ G E R P F Y ++
Sbjct: 176 MHWGFSEDRQPRADFDGYYYRKANG 200
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
+E I F+ D YL +Y D+ HY+ +G KEGR S Q+ +V
Sbjct: 36 QKESTLIFFDRDFYLNTYIDVHA----SGIDPIYHYVANGWKEGR----SPFQYFNVQAF 87
Query: 619 SEKSRDKADLSLSFDHKKVDLYTDY 643
S+ L++ + LY Y
Sbjct: 88 SKAHPRLEALNVDLAQACIRLYGSY 112
>gi|1935025|gb|AAB51753.1| membrane-type matrix metalloproteinase 1 [Mus musculus]
Length = 582
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + +
Sbjct: 167 IREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMSPFYQWMDTEN 268
>gi|254226123|ref|ZP_04919720.1| type I secretion target ggxgxdxxx repeat (2 copies) domain protein
[Vibrio cholerae V51]
gi|125621358|gb|EAZ49695.1| type I secretion target ggxgxdxxx repeat (2 copies) domain protein
[Vibrio cholerae V51]
Length = 1637
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 37/115 (32%), Gaps = 2/115 (1%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
D G D L I I G + + + + G GND + G
Sbjct: 1454 DQGEDSALSTAAFSTAHIDIAHGGGGDDRIYGQGGVDLMFGGSGNDQLYGGEGNDGLRGG 1513
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF--ENAIIVYDANEHKQD 336
+ N+ +GND+ G G D + L+K +N+ QD
Sbjct: 1514 TGNDTLDGGAGNDILIGGLGNDILTGGSGEDLFKWVDGDLDNSKDRITDFTIGQD 1568
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 8/110 (7%)
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD----SGGDDLLDLTLIGGVKNYIDLNTE 248
+ G L N + + F D GGDD + G +
Sbjct: 1441 FMKGPDSTILLNPDQGEDSALSTAAFSTAHIDIAHGGGGDDRI----YGQGGVDLMFGGS 1496
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ G E N + T +++ G +GND++IG N++ SG D+F
Sbjct: 1497 GNDQLYGGEGNDGLRGGTGNDTLDGGAGNDILIGGLGNDILTGGSGEDLF 1546
Score = 46.3 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 15/130 (11%), Positives = 25/130 (19%), Gaps = 8/130 (6%)
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T + H +R+ L
Sbjct: 1448 TILLNPDQGEDSALSTAAFSTAHIDIAHGGG---GDDRIYGQGGVDLMFGGSGNDQLYGG 1504
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ L G D + G DI GS +DL D +
Sbjct: 1505 EGNDGLRGGTGNDTLDGGAGNDILIGGLGNDILTG-----GSGEDLFKWVDGDLDNSKDR 1559
Query: 426 YITHGVKEGR 435
+ + +
Sbjct: 1560 ITDFTIGQDK 1569
>gi|227820945|ref|YP_002824915.1| hemolysin-type calcium-binding repeat-like hypothetical protein
[Sinorhizobium fredii NGR234]
gi|227339944|gb|ACP24162.1| hemolysin-type calcium-binding repeat-like hypothetical protein
[Sinorhizobium fredii NGR234]
Length = 985
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/327 (13%), Positives = 83/327 (25%), Gaps = 35/327 (10%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ ++ GDD L L N L + G+ N I
Sbjct: 169 GGSDRIYGGNGGDSVLGGAGDDYLSGGYGVDWLSADEGNDTLLGGAGGDYLYGHSGNDNI 228
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------------FY 309
+ +++ G SG D + G S ++ ND G +G DT
Sbjct: 229 KGESGTDTISGGSGRDTIDGGSEDDYLAGDGDNDTVLGGAGNDTIRHNMESWANDGKDVL 288
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE--------RLRFADQCIDSVNVKQRSI 361
++ + + + LS+ + ++
Sbjct: 289 DGGIGHDEVVLVGLSGTFTAKSSATKQTLSNGTTIVNFEAYTINGSETADRFTGWTGADT 348
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L + + LI + G D + +G D+ + G D ++ G D
Sbjct: 349 LSGYSGNDTLIGLAGNDHLDGGLGSDILDGGDGNDLLI---VGSGGKDVIKGGTGYDTIW 405
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHED----LINAFADAPDLVQVGKDHFSNFGCEE 477
R T G+ + K + + + + G
Sbjct: 406 IDRSDGTTGLTFTVSGTTAKLSDGTVVTDGESFRIETGSGSDIISAGTAGYLSIDAGSGN 465
Query: 478 GRFVT--FDSYLYLGSYDDLRNVFGSD 502
R Y S D + D
Sbjct: 466 NRLTGGKGGDSFYSTSGSDTVSGGDGD 492
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/375 (14%), Positives = 104/375 (27%), Gaps = 27/375 (7%)
Query: 68 LTFEETSIHSDIKFI-SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ FE +I+ + T S I D G+G + +
Sbjct: 324 VNFEAYTINGSETADRFTGWTGADTLSGYSGNDTLIGLAGNDHLDGGLGSDILDGGDGND 383
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
+ G GY +D +V + G + +
Sbjct: 384 LLIVGSGGKDVIKGGTGYDTIWIDRSDGTTGLTFTVSGTTAKLSDGTVVTDG--ESFRIE 441
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
I G L + + + Y + G D + G + I
Sbjct: 442 TGSGSDIISAGTAGYLSIDAGSGNNRLTGGKGGDSFYSTSGSDTV---SGGDGDDRIADY 498
Query: 247 TESWSSIGGYEKNMTIA----QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ + G N +++ T + +++G +G+D + N ++G DG S
Sbjct: 499 GGGTNKLDGGNGNDSVSAETETGTALTTMLGGAGSDSLSVNYGG---GSTAGRFSVDGGS 555
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ-----------CI 351
G DT + + +A + + ++E++ F
Sbjct: 556 GTDTLWISRYDSTKNLTFVLSANATLVNGDV---TVKNIEKINFTSGQGHDTLTAGSLDD 612
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
D + L+ +DL G D S G T L+ +D+
Sbjct: 613 DLNGMGGNDTLKGLGGDDDLTGWTGADTLYGGDGNDGLWGSGGIKDTSADRLHGEKGNDV 672
Query: 412 RNVFGSDRGAAARHY 426
NV D + +
Sbjct: 673 LNVNAGDYASGGDGF 687
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/256 (12%), Positives = 60/256 (23%), Gaps = 24/256 (9%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG-----GYEKNMTIAQ 264
+ G++ D++ + G S++ + G +
Sbjct: 678 GDYASGGDGFDRLVIEFGEETFDVSFVFGNGLVKVNANTSFTGMEALEYVGGSGKDAVTG 737
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-FYYAPSYLYKIYRFEN 323
I+ + G GND + G N+ + GND G +G DTF + +
Sbjct: 738 SAQIDYLDGGLGNDTLRGGGGNDYLIDGRGNDRLYGDAGNDTFDRFSDGTGTDHFDGGSG 797
Query: 324 AIIV------------------YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + L +E + + + + L+
Sbjct: 798 VDTLEFDIISDQSVIVDLENSARNGGVATGLTLVSIENVVGQNTDDTILGNGVANTLKGG 857
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
+ L G D E H G D + D F
Sbjct: 858 MGDDRLDGRAGNDKLEGGAHGDLLTGGTGADQFIYASGDAIGSGDQITDFKRGEDKLVID 917
Query: 426 YITHGVKEGRNPDAFK 441
Sbjct: 918 KGVFHFSNLVLYSGTD 933
Score = 42.5 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 20/143 (13%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+ D ++YG GN+ + + D G D L+ +I +D
Sbjct: 762 LIDGRGNDRLYG----DAGNDTF---DRFSDGTGTDHFDGGSGVDTLEFDIISDQSVIVD 814
Query: 245 LNTE-------------SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
L S ++ G + TI + V ++ G G+D + G + N+
Sbjct: 815 LENSARNGGVATGLTLVSIENVVGQNTDDTILGNGVANTLKGGMGDDRLDGRAGNDKLEG 874
Query: 292 SSGNDVFDGSSGLDTFFYYAPSY 314
+ D+ G +G D F Y +
Sbjct: 875 GAHGDLLTGGTGADQFIYASGDA 897
>gi|163742344|ref|ZP_02149731.1| type I secretion target repeat protein [Phaeobacter gallaeciensis
2.10]
gi|161384294|gb|EDQ08676.1| type I secretion target repeat protein [Phaeobacter gallaeciensis
2.10]
Length = 359
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 62/183 (33%), Gaps = 12/183 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
++ G+DLL + GG + + + + ++ G +
Sbjct: 179 SGNDTINGGSGQDVLFGGSGEDLLRGGWGSDLMKGGRQADVLIGAQGHDTVYGEGGADRL 238
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + +VG SG+D ++G + + F +GND G + D F + I F
Sbjct: 239 DGGSGNDRLVGGSGHDTILGGAGIDRLFGGNGNDSLVGGAQADYFIFRGNFGDDTIRGFA 298
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL--EYTASYEDLIQVIGQDVF 380
++ K D E +D + + + + + + L+ V D+
Sbjct: 299 A-----LSDAEKIDLRGVSEISDLSDLRDNHLTQDGSNAIIADGLGNTITLLGVDINDLD 353
Query: 381 ESM 383
Sbjct: 354 AGD 356
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 43/160 (26%), Gaps = 28/160 (17%)
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESS---------------------GNDVFD 299
I+ T++ + +G + IG N++ + G+D
Sbjct: 117 GISTGTLVVDAMNIAGQETPIGTDGNDLLTGTVGSDDVRLMNGDDAFAAGQGDIGDDTIR 176
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV---ERLRFADQCIDSVNV 356
G SG DT S ++ ++ D + + L A
Sbjct: 177 GGSGNDTI--NGGSGQDVLFGGSGEDLLRGGW--GSDLMKGGRQADVLIGAQGHDTVYGE 232
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
L+ + + L+ G D G D
Sbjct: 233 GGADRLDGGSGNDRLVGGSGHDTILGGAGIDRLFGGNGND 272
>gi|149203389|ref|ZP_01880359.1| Animal haem peroxidase [Roseovarius sp. TM1035]
gi|149143222|gb|EDM31261.1| Animal haem peroxidase [Roseovarius sp. TM1035]
Length = 3045
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/222 (14%), Positives = 62/222 (27%), Gaps = 10/222 (4%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G +I I ++V+ SG D++ G+ N+ F G+D
Sbjct: 2779 GTAAADALFGGAEGDNILALAGRDMIFAGDGDDNVLAGSGRDMIFGDGGNDRLFGEGGDD 2838
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA---NEHKQDFLSDVERLRFADQCIDS 353
+G +G D A + L+ + + Y D L + + S
Sbjct: 2839 FIEGGAGNDFVVGGAGADLFVATMNDGDDVYYGDDVTGGSGSDTLDMSQITADTSVDLGS 2898
Query: 354 VNVKQRSILEYTASYEDL------IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ + + + L I G D + E G D+
Sbjct: 2899 ASGGRGYASSAQSGNDVLWSIESFIGGAGNDTITAGSAQNEMDGGVGNDVYRFLSASDAD 2958
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
D + + D+ +G G+ + +
Sbjct: 2959 GDTISSFEPGDKID-LSQIDANGSGPGKGTFTLVSEAFSGGG 2999
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 38/138 (27%), Gaps = 10/138 (7%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
N + + ++ S G+DLL ++ G +
Sbjct: 1683 AENTGVTLNGTTFSNN---SLNGSAGNDLLTGVSPFFGV-------GGNDTLNGNGGDDI 1732
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + G +G D + G +V + +D+ G DT + +
Sbjct: 1733 LNGQAGNDVLNGGAGFDQLDGGGGADVLNGGADDDIIIAGGGTDTIIQASTDGRDVVDGG 1792
Query: 322 ENAIIVYDANEHKQDFLS 339
+ + +
Sbjct: 1793 TGNDTFRVQGNAEAETFT 1810
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 52/147 (35%), Gaps = 13/147 (8%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GS GN++ T+ +GGDD+L+ G N + + + G
Sbjct: 1701 NGSAGNDLLTGVSPFFGVGGNDTLNGNGGDDILN----GQAGNDVLNGGAGFDQLDGGGG 1756
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY--YAPSYLY 316
+ + ++ G D +I S + G DV DG +G DTF A + +
Sbjct: 1757 ADVLNGGADDDIIIAGGGTDTIIQASTD-------GRDVVDGGTGNDTFRVQGNAEAETF 1809
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVER 343
+Y A FL+ E
Sbjct: 1810 TVYAMSGGQNAGLAASLGTSFLASTEI 1836
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 49/326 (15%), Positives = 91/326 (27%), Gaps = 25/326 (7%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
S F+ NG+ + + + + +G G+ + ++ AL
Sbjct: 954 VSDADRFDFLLGRNGWTSDTNGLNTIDLWVGGLAERIMPFGGMLGSTFTAIFEAQME-AL 1012
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
Y N+ E +SF +++ D D G D V
Sbjct: 1013 QDGDRFYYLTRTQGQNFLNELEENSFSKMLLANTSLADPGADGIRG------TEDDVVRH 1066
Query: 193 KIYGAPKGSLGNNIYKIE------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN 246
I G + + + ++ + + G D T NYI +
Sbjct: 1067 HI-GVDSFARYDFVLEVNQANQLIDDPVGNDPVLEGLGMGKVVRDDPTTSEVETNYIRVT 1125
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF-DGSSGLD 305
++GG N TI + + G G+D + ++ GND+ D D
Sbjct: 1126 GGEHLAVGGTNGNDTIITSDGDDGIWGDDGDDFIESGFGVDLVNGGGGNDIILDSGDEGD 1185
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ + N + V K V+ + +
Sbjct: 1186 ---FLKGEGGDDVMASANGLDVLMGGTGKDVIFLGVD-------SSEVFGGSGDDFIMGG 1235
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGL 391
A + L+ G D E+ F
Sbjct: 1236 AGADFLLGNEGDDWMEADGGFDTTAG 1261
>gi|86148746|ref|ZP_01067019.1| VCBS [Vibrio sp. MED222]
gi|85833461|gb|EAQ51646.1| VCBS [Vibrio sp. MED222]
Length = 2142
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 60/175 (34%), Gaps = 2/175 (1%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDL-LDLTLIGGVKNYIDLNT 247
+ + G N Y +V + + + G+D + T +
Sbjct: 1902 AVLDQNTGQASNQDAINTYIKDVFTQGRDSNVILNPNQGEDSEIAATNNSTANLDVAHGG 1961
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
I G + I + + + G GND + G + ++ SG+D+ G G D
Sbjct: 1962 GGSDYIYGEGGSDVIFGGSGDDVIDGGEGNDGLRGGTGHDTLKGGSGDDILIGGIGNDIL 2021
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ ++K + + + + + DF +++ +D + S+L
Sbjct: 2022 TGGSDDDIFKFVD-QGSGVRHGEKDTITDFTKGDDKIDISDLLHTDSSDSINSLL 2075
Score = 42.1 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 22/179 (12%), Positives = 44/179 (24%), Gaps = 12/179 (6%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH---TVIESVVGSSGNDVV 280
G + + + I++ ++ + + I V++ G + N
Sbjct: 1858 GQAGYNKIVDNVDINKGVSINVGDAG-DAVWTGQGDDVIYLGDSHAVLDQNTGQASNQDA 1916
Query: 281 IGNSANNVFF-ESSGNDVFDGSSGLDT-FFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
I +VF N + + + G D+ S Y E D
Sbjct: 1917 INTYIKDVFTQGRDSNVILNPNQGEDSEIAATNNSTANLDVAHGGGGSDYIYGEGGSDV- 1975
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
+ + L ++ L G D+ DI
Sbjct: 1976 -----IFGGSGDDVIDGGEGNDGLRGGTGHDTLKGGSGDDILIGGIGNDILTGGSDDDI 2029
>gi|83941732|ref|ZP_00954194.1| type I secretion target repeat protein [Sulfitobacter sp. EE-36]
gi|83847552|gb|EAP85427.1| type I secretion target repeat protein [Sulfitobacter sp. EE-36]
Length = 314
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 59/210 (28%), Gaps = 12/210 (5%)
Query: 218 FIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN 277
D G +D T + T I G + IA + + V +G+
Sbjct: 14 GAAAFIDIGVEDEDSATDEDAPAGDVISGTPRDDLIIGSGGSDQIAGYGGDDLVGARNGD 73
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
D V G+S ++ +GND G+ G D + D
Sbjct: 74 DTVFGDSGDDTLRGGAGNDDLHGNDGDDLL----AGAEDADGLTGHNDDDILQGGAGHDT 129
Query: 338 LSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
L+ + L + +L + L G D + +
Sbjct: 130 LNGSAGGDTLFGDSGDDAVMGGLGDDLLIGGRGQDALFGGWGNDTIDGTVDPDR---QDA 186
Query: 395 RDITFDSYLYL--GSYDDLRNVFGSDRGAA 422
R D YL GS DD+ +D
Sbjct: 187 RVTDIDEGDYLNGGSGDDVILAGSNDTVTP 216
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/243 (13%), Positives = 73/243 (30%), Gaps = 18/243 (7%)
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYI 243
A I + S + +P I SGG D + D + +
Sbjct: 16 AAFIDIGVEDEDSATDEDAPAGDVISGTPRDDLIIGSGGSDQIAGYGGDDLVGARNGDDT 75
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
++ G N + + + + G+ D + G++ +++ +G+D +GS+G
Sbjct: 76 VFGDSGDDTLRGGAGNDDLHGNDGDDLLAGAEDADGLTGHNDDDILQGGAGHDTLNGSAG 135
Query: 304 LDTFFYYAPS-------YLYKIYRFENAIIVYDANEHKQ-----DFLSDVERLRFADQCI 351
DT F + + ++ + D R+ D+
Sbjct: 136 GDTLFGDSGDDAVMGGLGDDLLIGGRGQDALFGGWGNDTIDGTVDPDRQDARVTDIDEGD 195
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
++ S + + G+D G+ + R + L +DD
Sbjct: 196 YLNGGSGDDVI-LAGSNDTVTPGAGRDDVILGDWVSPDGIVDIRSFDIEDDSLLLVWDDS 254
Query: 412 RNV 414
Sbjct: 255 DAA 257
Score = 52.5 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/234 (15%), Positives = 64/234 (27%), Gaps = 25/234 (10%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G + + D + + I G ++ I + + G G+D+V + +
Sbjct: 14 GAAAFIDIGVEDEDSATDEDAPAGDVISGTPRDDLIIGSGGSDQIAGYGGDDLVGARNGD 73
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ F SG+D G +G D N A D L+
Sbjct: 74 DTVFGDSGDDTLRGGAGNDDL-------------HGNDGDDLLAGAEDADGLTG------ 114
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG 406
+ L +A + L G D G+D F +
Sbjct: 115 HNDDDILQGGAGHDTLNGSAGGDTLFGDSGDDAVMGGLGDDLLIGGRGQDALFGGWG--- 171
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
D + DR A I G + N + + S++ +
Sbjct: 172 -NDTIDGTVDPDRQDARVTDIDEG--DYLNGGSGDDVILAGSNDTVTPGAGRDD 222
>gi|284055022|ref|ZP_06385232.1| Integrin alpha beta-propellor repeat protein [Arthrospira platensis
str. Paraca]
Length = 534
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G+D L GG+ + I G + I+ +++ G GND+++ +
Sbjct: 1 GGPGNDTL----YGGIDDDQIGGGLGNDLIFGGLGDDIISGGEGDDTIYGGLGNDLILAD 56
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
NN+ F ++G++ G +G DTF A
Sbjct: 57 EGNNILFGNAGSNTLVGGTGNDTFVLEAGDG 87
>gi|293348995|ref|XP_001072313.2| PREDICTED: matrix metalloproteinase 1b (interstitial collagenase)
[Rattus norvegicus]
gi|293360883|ref|XP_235849.3| PREDICTED: matrix metalloproteinase 1b (interstitial collagenase)
[Rattus norvegicus]
Length = 460
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 50/151 (33%), Gaps = 25/151 (16%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNP-----NAQEVARWALGEWSKVVDLTFEET-SIH 76
+ Y I Y T L++ I P ++ A WS V LTFE
Sbjct: 91 VTPYSITYNNTQWTKTHLTYSILNYTPHLPRKVVEDAIERAFKVWSDVTPLTFERVFEEE 150
Query: 77 SDIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
DI S+ + P ++++D + W +
Sbjct: 151 GDIVLSFHQGDHGDLYSFNGSKSHFAHAFPP--GPGLGGDVHYDLDETWTNNSDNFNLFY 208
Query: 122 HNALHEIGHALGLMHP-GSYNGGYPVYGVDN 151
A HE+GH+LGL H +P Y +N
Sbjct: 209 VTA-HELGHSLGLSHSKDEEALMFPSYTWNN 238
>gi|302875211|ref|YP_003843844.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
gi|302578068|gb|ADL52080.1| Hemolysin-type calcium-binding region [Clostridium cellulovorans
743B]
Length = 559
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 68/472 (14%), Positives = 133/472 (28%), Gaps = 92/472 (19%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
++ + D+ G G T + + I +
Sbjct: 16 TGNTGNDILDGGLGNDLLIGGRGNDTYIFNRGYGVITI---------------EDYDEAI 60
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
D+ V + + +D + V+ Y + + N I+
Sbjct: 61 GAIDTIKFGVGINIENITFLRIIDNLEISIKGTNDKLIVRNFYKDKRYQIENFIFNDGST 120
Query: 213 QKDSPFIQTI-YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ F I Y + D + + KN + S ++ G N + + +
Sbjct: 121 FYKNVFDSLIMYGTPNADTIRAS----DKNETIIALGSNDAVYGNGGNDFLYGQGGDDKL 176
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL---------DTFFYYAPSYLYKIYRFE 322
G +G+D++ G + + +GND+ DG +G DT+ + IY +
Sbjct: 177 YGGNGDDILDGGEGKDYLYGENGNDLLDGKNGGGYLEGGAGVDTYIFRKGYGQVNIYEYS 236
Query: 323 NA-----------------------------------IIVYDANEHKQDFLSDVERLRFA 347
+ D +E+++FA
Sbjct: 237 GEANTIIDTLKLEDINPNEISLNCNRYDLIMKLNESKDSITIQGYFSSDLHK-IEKIQFA 295
Query: 348 DQC-------------------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D IDS+N + I+ + L G D +
Sbjct: 296 DGTVWDINTIKSSLVYSNGTVGIDSLNAEGEVIMNGYEGDDTLRSGAGNDKIYGGTGNDQ 355
Query: 389 FGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ G D+ + D LY G+ DD+ + Y +G + LE
Sbjct: 356 VYGNGGNDLLYGEDGDDKLYGGNGDDILDGGEGKDYL----YGENGNDLLDGKNGGGYLE 411
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLR 496
A ++ I + D D++ ++ V ++ S DL
Sbjct: 412 GGAGNDTYIFSKGDGQDIIYNSSSLDTDNDKLSLNDVNLSETAFIKSNTDLI 463
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 58/168 (34%), Gaps = 7/168 (4%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
+ + + I E ++ N I T + V G+ GND++ G ++
Sbjct: 315 TVGIDSLNAEGEVIMNGYEGDDTLRSGAGNDKIYGGTGNDQVYGNGGNDLLYGEDGDDKL 374
Query: 290 FESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
+ +G+D+ DG G D + + + + QD + +
Sbjct: 375 YGGNGDDILDGGEGKDYLYGENGNDLLDGKNGGGYLEGGAGNDTYIFSKGDGQDIIYNSS 434
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
L + + +V ++ + +I++ ++ ++ +G
Sbjct: 435 SLDTDNDKLSLNDVNLSETAFIKSNTDLIIKLNETTDSVTILGYFNYG 482
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 60/185 (32%), Gaps = 38/185 (20%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
++G+ ND + GN+ N++ GND+ G G DT+ + + I ++ AI D
Sbjct: 6 LIGTENNDQLTGNTGNDILDGGLGNDLLIGGRGNDTYIFNRGYGVITIEDYDEAIGAIDT 65
Query: 331 NEHKQ----------------------------------DFLSDVERLRFADQCIDSVNV 356
+ D +E F D NV
Sbjct: 66 IKFGVGINIENITFLRIIDNLEISIKGTNDKLIVRNFYKDKRYQIENFIFNDGSTFYKNV 125
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLR 412
I+ T + + + + ++ + G D + D LY G+ DD+
Sbjct: 126 FDSLIMYGTPNADTIRASDKNETIIALGSNDAVYGNGGNDFLYGQGGDDKLYGGNGDDIL 185
Query: 413 NVFGS 417
+
Sbjct: 186 DGGEG 190
>gi|281353246|gb|EFB28830.1| hypothetical protein PANDA_004065 [Ailuropoda melanoleuca]
Length = 455
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 51/162 (31%), Gaps = 38/162 (23%)
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH-SDIKFISSN--NGYVCTPRYDSRY-------- 98
A+ A WS V LTF E +DI+ + Y P
Sbjct: 67 TARAALLQAFRYWSNVAPLTFREVQAGWADIRLSFHGRQSPYCSKPFDGPGRVLAHADIP 126
Query: 99 -FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
++FD+ ++W G G L A HE+GHALGL H
Sbjct: 127 ELGSVHFDEDELWTEGTSGGVNLRIIAAHELGHALGLGH--------------------- 165
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
Y + + A + D+ +Q +YG
Sbjct: 166 -----SRYTQALMAPVYAGYRAHFKLHPDDVAGIQALYGKKS 202
>gi|73962351|ref|XP_848757.1| PREDICTED: similar to matrix metalloproteinase 14 preproprotein
isoform 1 [Canis familiaris]
Length = 585
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 113 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 165
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 166 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 225
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 226 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 267
>gi|15606363|ref|NP_213742.1| hemolysin [Aquifex aeolicus VF5]
gi|2983562|gb|AAC07135.1| hemolysin [Aquifex aeolicus VF5]
Length = 398
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 4/159 (2%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ G Y + + ++L+ + + + +I G
Sbjct: 105 DTTGGAVTYAPASDNNLKNVEKIVATGSNGATINLSNQTEG--FEIVGSAGNDTITGGAG 162
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N TIA +++ G +GND + G + N++ G D G +G D F AP I
Sbjct: 163 NNTIAGGAGNDTIAGGAGNDTLTGGAGNDIITGGKGQDTLTGGNGADVFGLDAPFA--AI 220
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ + + DF + + A ++S+
Sbjct: 221 DKITDFDTNTTDEKIAIDFKAGANLTKGAFGNVNSLGSG 259
Score = 45.9 bits (107), Expect = 0.019, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 41/142 (28%), Gaps = 13/142 (9%)
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFES----SGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
TV + VG N S ++ + ND+ DG G DT K+
Sbjct: 57 TVGDDDVGGGANVTYKLGSGDDTVIVDTNIEANNDIIDGGDGTDTI---------KVDTT 107
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
A+ A+++ + + I+ N + + +A + + G +
Sbjct: 108 GGAVTYAPASDNNLKNVEKIVATGSNGATINLSNQTEGFEIVGSAGNDTITGGAGNNTIA 167
Query: 382 SMKHFYEFGLSEGRDITFDSYL 403
G D
Sbjct: 168 GGAGNDTIAGGAGNDTLTGGAG 189
>gi|170717778|ref|YP_001784843.1| hypothetical protein HSM_1523 [Haemophilus somnus 2336]
gi|168825907|gb|ACA31278.1| hypothetical protein HSM_1523 [Haemophilus somnus 2336]
Length = 170
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 50/150 (33%), Gaps = 13/150 (8%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
YK + D G+ + S++GG E
Sbjct: 14 GTSYKGHSSSVAGHIFYVLVDEHGN-----------RKSFGWGKGENSTLGGIENITKTD 62
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
E+ G S +D++ G + G+D DG G D + YKI + +
Sbjct: 63 DIDYSETNFGGSDDDMLYGGDGADTLLGEGGDDYLDGGEGEDVAEFSGNFADYKITKMGD 122
Query: 324 AIIVYD--ANEHKQDFLSDVERLRFADQCI 351
+++ D DFL ++E+L F D
Sbjct: 123 GLLISDTKQGRDGTDFLRNIEKLNFKDITN 152
>gi|6754714|ref|NP_034939.1| stromelysin-1 preproprotein [Mus musculus]
gi|54872|emb|CAA44860.1| transin-1 [Mus musculus]
gi|13879491|gb|AAH06725.1| Matrix metallopeptidase 3 [Mus musculus]
gi|28300433|gb|AAO37583.1| matrix metalloproteinase 3 [Mus musculus]
gi|148692988|gb|EDL24935.1| mCG9886 [Mus musculus]
Length = 479
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 61/199 (30%), Gaps = 49/199 (24%)
Query: 25 NYFIRY-KPDVLTTHRLSFDITELNP-----NAQEVARWALGEWSKVVDLTFEETSIH-S 77
F + +++ I P + AL W +V LTF S +
Sbjct: 100 GGFSTFPGSPKWRKSHITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSRISEGEA 159
Query: 78 DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + + P + +FD + W + GT L
Sbjct: 160 DIMISFAVGEHGDFVPFDGPGTVLAHAYAP--GPGINGDAHFDDDERWTEDV-TGTNLFL 216
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE+GH+LGL H S + Y + + S + F
Sbjct: 217 VAAHELGHSLGLYH--------------------SAKAEALMYPVYKSSTDLSRFHLSQ- 255
Query: 183 PMVSDIVAVQKIYGAPKGS 201
D+ +Q +YG P S
Sbjct: 256 ---DDVDGIQSLYGTPTAS 271
>gi|188619|gb|AAA36321.1| matrix metalloproteinase-3 [Homo sapiens]
gi|260509|gb|AAA00036.1| prostromelysin=matrix metalloproteinase [human, Peptide, 477 aa]
gi|1688259|gb|AAB36942.1| stromelysin [Homo sapiens]
gi|46854935|gb|AAH69676.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|46854939|gb|AAH69716.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|50960755|gb|AAH74869.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|62898127|dbj|BAD97003.1| matrix metalloproteinase 3 preproprotein variant [Homo sapiens]
gi|62898143|dbj|BAD97011.1| matrix metalloproteinase 3 preproprotein variant [Homo sapiens]
gi|76780106|gb|AAI05955.1| Matrix metalloproteinase 3, preproprotein [Homo sapiens]
gi|77567902|gb|AAI07491.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|312150808|gb|ADQ31916.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [synthetic
construct]
Length = 477
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 54/195 (27%), Gaps = 50/195 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 109 WRKTHLTYRIVNYTPDLPK-------DAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMI 161
Query: 73 ---TSIHSDIK-FISSNN--GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
H D F N + P + +FD + W GT L A H
Sbjct: 162 SFAVREHGDFYPFDGPGNVLAHAYAP--GPGINGDAHFDDDEQWTKDT-TGTNLFLVAAH 218
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
EIGH+LGL H S T + Y + F
Sbjct: 219 EIGHSLGLFH--------------------SANTEALMYPLYHSLTDLTRFRLSQ----D 254
Query: 187 DIVAVQKIYGAPKGS 201
DI +Q +YG P S
Sbjct: 255 DINGIQSLYGPPPDS 269
>gi|4826834|ref|NP_004986.1| matrix metalloproteinase-14 preproprotein [Homo sapiens]
gi|317373419|sp|P50281|MMP14_HUMAN RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
Full=MMP-X1; AltName: Full=Membrane-type matrix
metalloproteinase 1; Short=MT-MMP 1; Short=MTMMP1;
AltName: Full=Membrane-type-1 matrix metalloproteinase;
Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
gi|963054|emb|CAA88372.1| membrane-type matrix metalloproteinase 1 [Homo sapiens]
gi|1127837|gb|AAA83770.1| membrane-type matrix metalloproteinase-1 [Homo sapiens]
gi|119586641|gb|EAW66237.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_b [Homo
sapiens]
gi|168277826|dbj|BAG10891.1| matrix metalloproteinase-14 precursor [synthetic construct]
Length = 582
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATYEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 167 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|329848206|ref|ZP_08263234.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843269|gb|EGF92838.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 977
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/360 (13%), Positives = 111/360 (30%), Gaps = 33/360 (9%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-------SWSSIGGYEKNMT 261
T+ GDD+L + V +D + +WS +G + +++
Sbjct: 488 GNDTLNGYGGDDTVIGGLGDDVLYVDSDFDVVVELDGEGKDMVVSTITWSLVGTFIEDLY 547
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ ++ G+ G + + G++ NN G D G G DT++
Sbjct: 548 LDGFDDVD-GTGNDGANRLTGSAGNNRLDGGVGADSMYGGDGDDTYYVD----------- 595
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS--YEDLIQVIGQDV 379
+ +Y+ +D + L + ++ + + L T + + G +V
Sbjct: 596 DLGDRIYEDAGMGRDVVISWVSLSLVGRVVEQLYLIGSDNLNATGNTLANTIDGNDGHNV 655
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ +++ + G D + ++ Y+ L G+D + Y G
Sbjct: 656 IDGGENYDKMYGGLGNDTYYVDHVDDKVYEFLNA--GTDVIYTSVEYDLTGRHIEVAYLT 713
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
A + + + + G+ + G D + + D+
Sbjct: 714 GSADMALFGNSLANALHGNDGGNLLDGRAGNDSLWGGLG-----DDTYGVNASGDVVTEL 768
Query: 500 ---GSDRGAAARHYITHGVKEGRNPDAFKALEYIAS--HEDLINAFADAPDLVQAGKDHF 554
G+D ++R Y E + + + L+ G D +
Sbjct: 769 DGEGTDTVESSRSYALGDFVENLFLTGASDINGTGNGLNNALVGNEGHNVLTGGLGDDSY 828
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 46/332 (13%), Positives = 110/332 (33%), Gaps = 30/332 (9%)
Query: 77 SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH 136
++ N T + + + + D G+G T + ++ L
Sbjct: 632 GSDNLNATGNTLANTIDGNDGHNVIDGGENYDKMYGGLGNDTYYVDHVDDKVYEFLNAGT 691
Query: 137 PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
Y Y + + ++LT + +S+ +A G ++ ++G
Sbjct: 692 DVIYT--SVEYDLTGRHIEVAYLTGSADMALFGNSLANALHGNDGGNLLDGRAGNDSLWG 749
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
LG++ Y + + T D G D ++ + + ++++
Sbjct: 750 G----LGDDTYGVNASGD----VVTELDGEGTDTVESSRSYALGDFVE------------ 789
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
N+ + + I + G+ N+ ++GN +NV G+D + +G D A
Sbjct: 790 --NLFLTGASDI-NGTGNGLNNALVGNEGHNVLTGGLGDDSYYVQAGNDVVVEAAGEGND 846
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+++ + ++ E + +Q ++++ + + L +G
Sbjct: 847 EVHSSVSFLLWGTYVEGLVLTGTANIDATGNNQVNSLFGNDGNNVIDGGGAGDLLWGGLG 906
Query: 377 QDVFESMKHFY-----EFGLSEGRDITFDSYL 403
D F +F SEG I ++
Sbjct: 907 ADTFLFQAGCRADSIYDFDASEGDVIDLSAFG 938
Score = 45.9 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 42/308 (13%), Positives = 89/308 (28%), Gaps = 37/308 (12%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D + + E +V ++ + E + N
Sbjct: 672 DTYYVDHVDDKVYEFLNAGTDVIYTSVEY--DLTGRHIEVAYLTGSADMALFGNSLANAL 729
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
+ + D G+G T + + + G + G +
Sbjct: 730 HGNDGGNLLDGRAGNDSLWGGLGDDTYGVNASGDVVTELDGEGTDTVESSRSYALGDFVE 789
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
+ + + ++ + + G+ G LG++ Y
Sbjct: 790 NLFLTGASDINGTGNGLNNALVGNEGHNVL----------------TGGLGDDSYY---- 829
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+G D +++ G + + + S+ G Y + + + I+
Sbjct: 830 ----------VQAGNDVVVEAAGEGNDEVHSSV---SFLLWGTYVEGLVLTGTANID-AT 875
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA-IIVYDAN 331
G++ + + GN NNV D+ G G DTF + A IY F+ + V D +
Sbjct: 876 GNNQVNSLFGNDGNNVIDGGGAGDLLWGGLGADTFLFQAGCRADSIYDFDASEGDVIDLS 935
Query: 332 EHKQDFLS 339
+S
Sbjct: 936 AFGSGTIS 943
Score = 40.9 bits (94), Expect = 0.64, Method: Composition-based stats.
Identities = 45/293 (15%), Positives = 73/293 (24%), Gaps = 33/293 (11%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+D P + SGGD + D + D+ + + + + T
Sbjct: 303 GFGYASEDDPSQDGVSGSGGDAVFDFSGNHLRATIDDVVISLALFLNAGQGGVFLPDPT- 361
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN---- 323
+ + NN S+G D F +D F Y I +
Sbjct: 362 DTTAGVKGADGTTDLIFGNNTIEGSAGIDTF--QLEVDNFIYDDADTGVGITPLGSVIID 419
Query: 324 -AIIVYDANEHKQDFLSDVERLR------FADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
V D ++D+E + + D D + L A+ DL G
Sbjct: 420 LTDGVIDLGSGATSVIADIEHIDVIIRDGYFDSNDDFHDSGVAVYLRGNAAANDLGSSEG 479
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDD-------LRNVFGSDRGAAARHYITH 429
D + G D Y D + G D + +
Sbjct: 480 DDELKGEAGNDTLNGYGGDDTVIGGLGDDVLYVDSDFDVVVELDGEGKDMVVSTITWSLV 539
Query: 430 G------------VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
G +G D L A + L G D +
Sbjct: 540 GTFIEDLYLDGFDDVDGTGNDGANRLTGSAGNNRLDGGVGADSMYGGDGDDTY 592
>gi|326326118|ref|YP_004250928.1| RTX toxin RtxA [Vibrio nigripulchritudo]
gi|323669170|emb|CBJ93227.1| MARTX [Vibrio nigripulchritudo]
Length = 4990
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/220 (13%), Positives = 58/220 (26%), Gaps = 15/220 (6%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D L + I+++ +++ G + A + G G+DV +N+
Sbjct: 4613 DFLRNSGHLQGDGDINVSLGNYNFNWGGDGRDLGAYLGDNNNFWGGRGDDVYYATGTSNL 4672
Query: 289 FFESSGND---------VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
F G D + G G DT A + + + +
Sbjct: 4673 FTGGEGQDMGVLMGRENMMFGGDGNDTAVI-AGRINHAFMGAGDDQSFVFGEGGEVSTDA 4731
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + G D + ++ S+G D+
Sbjct: 4732 GRDYAVISGNFNRIDMGGDQDYSVTIGNNNQAELGGGDDFANAFGNYNRINGSDGNDVIK 4791
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
L Y + + D A +G N
Sbjct: 4792 -----LMGYHAVLDGGEDDDRLIASAIAKFSQLDGGNGQD 4826
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 36/268 (13%), Positives = 67/268 (25%), Gaps = 19/268 (7%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN---ALHEIGHA 131
DI N Y D R D + W + G
Sbjct: 4623 GDGDINVSLGN--YNFNWGGDGRDLGAYLGDNNNFWGGRGDDVYYATGTSNLFTGGEGQD 4680
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
+G++ G N + G D + M Q +
Sbjct: 4681 MGVL-MGRENMMFGGDGNDTAVIAGRINHAFMGAGDDQSFVFGEGGEVSTDAG------- 4732
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ Y G+ + + + GG D D G N I+ ++
Sbjct: 4733 -RDYAVISGNFNRIDMGGDQDYSVTIGNNNQAELGGGD--DFANAFGNYNRIN-GSDGND 4788
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGN--DVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
I + + + ++ S+ + G + +V + F G G+D+F
Sbjct: 4789 VIKLMGYHAVLDGGEDDDRLIASAIAKFSQLDGGNGQDVMVLGGYQNTFKGGDGVDSFIV 4848
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ + + QD
Sbjct: 4849 SGAVIDNLVEDIRSEDNIVFNGIDWQDL 4876
Score = 37.8 bits (86), Expect = 5.8, Method: Composition-based stats.
Identities = 37/252 (14%), Positives = 70/252 (27%), Gaps = 37/252 (14%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
F IY GGDD ++L IG ++ E N T++
Sbjct: 22 GNNTINAIGFGGKIYAYGGDDHINLGSIGA-------------TVYTGEGNDTVSAGAGY 68
Query: 269 ESVVGSSGNDVVIGNSA-NNVFFESSGNDVFDGSSGL-DT--------FFYYAPSYLYKI 318
V + GN V G + ++ G+ VF G++G D Y + +
Sbjct: 69 LRVDDTGGNLTVRGAAGYADINKSGDGSVVFQGAAGAVDIEHTGLHGKVDYAGAAAYNNL 128
Query: 319 YRFENAIIVYDANEHKQDFL---SDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQV 374
R + + + L ++ L F + ++ + + +
Sbjct: 129 VRKGESGGMTFKGAGGYNSLWHETNEGDLSFNGAGAGNKIDRTWFDVYQGSHGNVAFYGA 188
Query: 375 IGQDVFE----------SMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ + + G+ S R+ D A +
Sbjct: 189 GAANSISSRVETGNIFFAGAGADNHIVRRGKIGDITMKGAGASNRIERSCQADDEYADTQ 248
Query: 425 HYITHGVKEGRN 436
+T G N
Sbjct: 249 GNVTFEGAGGYN 260
Score = 37.1 bits (84), Expect = 9.0, Method: Composition-based stats.
Identities = 31/255 (12%), Positives = 63/255 (24%), Gaps = 10/255 (3%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
E ++I I + + + S V N+ +G D + G
Sbjct: 19 ADEGNNTINAIGFGGKIYAYGGDDHINLGSIGATVYTGEGNDTVSAGAGYLRVDDTGGNL 78
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
T + Y V D+E + + +++
Sbjct: 79 TV---RGAAGYADINKSGDGSVVFQGAAG---AVDIEHTGLHGKVDYAGAAAYNNLVRKG 132
Query: 366 ASYEDLIQVIGQDVF---ESMKHFYEF-GLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
S + G E+ + F G G I + +G+
Sbjct: 133 ESGGMTFKGAGGYNSLWHETNEGDLSFNGAGAGNKIDRTWFDVYQGSHGNVAFYGAGAAN 192
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
+ + G A + D+ A A + ++ + +G
Sbjct: 193 SISSRVETGNIFFAGAGADNHIVRRGKIGDITMKGAGASNRIERSCQADDEYADTQGNVT 252
Query: 482 TFDSYLYLGSYDDLR 496
+ Y Y D+
Sbjct: 253 FEGAGGYNRLYSDVA 267
>gi|170023074|ref|YP_001719579.1| virulence determinant [Yersinia pseudotuberculosis YPIII]
gi|169749608|gb|ACA67126.1| virulence determinant [Yersinia pseudotuberculosis YPIII]
Length = 3110
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 9/167 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL--TLIGGVKNYIDLNTESWSSI 253
G + G N + + + G+D + L L + + ID++ +S +
Sbjct: 2173 GFKQYQGGENADTFILTSAAASKSHILSGGEGNDTVALGEVLGNEIDSIIDISKGYYSQV 2232
Query: 254 GGY-EKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2233 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2290
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ H++ +E + + ++
Sbjct: 2291 GLAQ---GGTGLDSYHILKSTHEKSLQIRIEEVSENNNTDMQISNIF 2334
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 47/153 (30%), Gaps = 30/153 (19%)
Query: 274 SSGNDVVIGNSA----NNVFFESSGNDVFD-----------GSSGLDTFFYYAPSYLYKI 318
SSGND V+ SA N GND G G DT++Y A S I
Sbjct: 2637 SSGNDEVVITSATFLPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI 2696
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+Y LS ER + + V + + + D
Sbjct: 2697 ADTSGLDHLYLDKHILLHTLSA-ER-----RENNLVLNIADNT----SGRIIFVDWYLAD 2746
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ EF E ITFD L Y D
Sbjct: 2747 ENKV-----EFIWVEDSQITFDELFSLRPYSDE 2774
Score = 40.2 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 10/135 (7%)
Query: 274 SSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--LYKIYRFENAIIVYDA 330
G+DV G + N+F SG + G DTF + + + + E V
Sbjct: 2152 GGGDDVAKGYHKKKNIFTIGSGFKQYQGGENADTFILTSAAASKSHILSGGEGNDTVALG 2211
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS-------YEDLIQVIGQDVFESM 383
+ S ++ + ++ KQ ++L + + +I + M
Sbjct: 2212 EVLGNEIDSIIDISKGYYSQVNGGVEKQVALLYDFENILGHENVNDTIIGNDVDNYLNGM 2271
Query: 384 KHFYEFGLSEGRDIT 398
+ + G D+
Sbjct: 2272 GGDDKIWGNGGNDLL 2286
>gi|119488885|ref|ZP_01621847.1| Hemolysin-type calcium-binding toxin [Lyngbya sp. PCC 8106]
gi|119455046|gb|EAW36188.1| Hemolysin-type calcium-binding toxin [Lyngbya sp. PCC 8106]
Length = 253
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 57/188 (30%), Gaps = 20/188 (10%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ F ++IY GG+DL+ + E + G N + +
Sbjct: 55 DFLISADDFPKSIYGLGGNDLIIAGIQSAFL----YGNEGQDQLRGGFGNDVLFGGKDSD 110
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G G+DV+ GN N+ +GND+ G G D +V
Sbjct: 111 QLEGQQGDDVLYGNQGNDALAGDAGNDILLGGEGDD--------------GLRGGYLVDL 156
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + + L D + L + + L G D + F
Sbjct: 157 --DFGEIDQDGDDFLSGGGGGDDMAGGQGNDFLSGDSGNDVLDGEQGNDTLDGGDGFDNL 214
Query: 390 GLSEGRDI 397
G D+
Sbjct: 215 TGRSGTDL 222
Score = 38.2 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 41/137 (29%), Gaps = 8/137 (5%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL---DLTLIGGVKNYIDLNTESWS-----SIGGYEKNM 260
+ + + G+D+L + +DL+ + G
Sbjct: 117 GDDVLYGNQGNDALAGDAGNDILLGGEGDDGLRGGYLVDLDFGEIDQDGDDFLSGGGGGD 176
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+A + + G SGNDV+ G N+ G D G SG D + +
Sbjct: 177 DMAGGQGNDFLSGDSGNDVLDGEQGNDTLDGGDGFDNLTGRSGTDLMVLSPNNEGFDRIS 236
Query: 321 FENAIIVYDANEHKQDF 337
+ +D D
Sbjct: 237 NARRWLRFDRFAGGFDL 253
>gi|62896761|dbj|BAD96321.1| matrix metalloproteinase 10 preproprotein variant [Homo sapiens]
Length = 476
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 55/194 (28%), Gaps = 46/194 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 108 WRKTHLTYRIVNYTPDLP-------RDAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMI 160
Query: 73 ---TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F + + +I+FD + W GT L A HE+
Sbjct: 161 SFAVKEHGDFYSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWTED-ASGTNLFLVAAHEL 219
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H S T + Y + A F D+
Sbjct: 220 GHSLGLFH--------------------SANTEALMYPLYNSFTELAQFRLSQ----DDV 255
Query: 189 VAVQKIYGAPKGSL 202
+Q +YG P S
Sbjct: 256 NGIQSLYGPPPAST 269
>gi|13027664|gb|AAG34676.2|AF306662_1 matrix metalloprotease MT1-MMP [Cricetulus griseus]
Length = 582
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + +
Sbjct: 167 IREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDVFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 268
>gi|229837642|ref|ZP_04457804.1| putative virulence determinant [Yersinia pestis Pestoides A]
gi|229704330|gb|EEO91341.1| putative virulence determinant [Yersinia pestis Pestoides A]
Length = 3083
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 9/167 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL--TLIGGVKNYIDLNTESWSSI 253
G + G N + + + G+D + L L + + ID++ +S +
Sbjct: 2173 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 2232
Query: 254 GGY-EKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2233 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2290
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ H++ +E + + ++
Sbjct: 2291 GLAQ---GGTGLDSYHILKSTHEKSLQIRIEEVSENNNTDMQISNIF 2334
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 47/153 (30%), Gaps = 30/153 (19%)
Query: 274 SSGNDVVIGNSA----NNVFFESSGNDVFD-----------GSSGLDTFFYYAPSYLYKI 318
SSGND V+ SA N GND G G DT++Y A S I
Sbjct: 2637 SSGNDEVVITSATFLPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI 2696
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+Y LS ER + + V + + + D
Sbjct: 2697 ADTSGLDHLYLDKHILLHTLSA-ER-----RENNLVLNIADNT----SGRIIFVDWYLAD 2746
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ EF E ITFD L Y D
Sbjct: 2747 ENKV-----EFIWVEDSQITFDELFSLRPYSDE 2774
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 10/135 (7%)
Query: 274 SSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAIIVYDA 330
G+DV G + N+F SG + G DTF + S + + E V
Sbjct: 2152 GGGDDVAKGYHKKKNIFTIGSGFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALG 2211
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS-------YEDLIQVIGQDVFESM 383
+ S ++ ++ KQ ++L + + +I + M
Sbjct: 2212 EVLGNEIDSIIDISNGYYSQVNGGVEKQVALLYDFENILGHENVNDTIIGNDVDNYLNGM 2271
Query: 384 KHFYEFGLSEGRDIT 398
+ + G D+
Sbjct: 2272 GGDDKIWGNGGNDLL 2286
>gi|294678675|ref|YP_003579290.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
gi|294477495|gb|ADE86883.1| hemolysin-type calcium-binding repeat family protein [Rhodobacter
capsulatus SB 1003]
Length = 730
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/368 (14%), Positives = 87/368 (23%), Gaps = 45/368 (12%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ T+ G D L D +L GG N + ++ G + T+A
Sbjct: 244 DDSIDGLAGNDTLDGLAGADTLSGGADDDSLDGGADNDALAGDDGADTLAGGAGDDTLAG 303
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+++ G G D + G + ++ +GND G G D+ + +
Sbjct: 304 GAGNDALAGDDGTDSLAGGAGDDTLDGGAGNDALAGDDGTDSL--AGSAGNDTLDGGAGN 361
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
+ D L+ A + L G D +
Sbjct: 362 DALTGG-----------------DGTDSLAGGAGNDTLDGGAGEDSLDGGAGDDALAAGS 404
Query: 385 HFYEFGLSEGRDIT------FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
GRD D+ L L Y DL D
Sbjct: 405 G-DVMTGGAGRDSYDITWSPGDAPLTLTDYGDLTGAAAGSFETVLIRDEAFTADMEFRLD 463
Query: 439 AFKALEYIASHEDLINAFADAPDLVQV-------GKDHFSNFGCEEGRFVTFDSYLYL-- 489
+ + + F A D+ D L
Sbjct: 464 TVEGGVVAIVDGETVALFRGADLATLSEHLTLQDAADNSYTPDLPTPTIHGTDDPDTLTG 523
Query: 490 -----GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 544
Y L +G D +L A ++ L +
Sbjct: 524 TEADEAIYAHLGADTVVAGAGNDTVSGGYGADSLNGQDGNDSLLGGAQNDSLDGGAGNDS 583
Query: 545 DLVQAGKD 552
L + G D
Sbjct: 584 LLGEDGDD 591
Score = 46.7 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 41/360 (11%), Positives = 85/360 (23%), Gaps = 51/360 (14%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + T + D D G T+ + G
Sbjct: 312 GDDGTDSLAGGAGDDTLDGGAGNDALAGDDGTDSLAGSAGNDTLDGGAGNDALTGGDGTD 371
Query: 136 HPGSYNGGYPVYGVDNDYEND--SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G + G + D + ++ + + Y T D
Sbjct: 372 SLAGGAGNDTLDGGAGEDSLDGGAGDDALAAGSGDVMTGGAGRDSYDITWSPGDAPLTLT 431
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSP------------FIQTIYDSGGDDLLDLTLIGGVKN 241
YG G+ + + ++ + + I D L + +
Sbjct: 432 DYGDLTGAAAGSFETVLIRDEAFTADMEFRLDTVEGGVVAIVDGETVALFRGADLATLSE 491
Query: 242 YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
++ L + +S TI +++ G+ ++ + + + +GND G
Sbjct: 492 HLTLQDAADNSYTPDLPTPTIHGTDDPDTLTGTEADEAIYAHLGADTVVAGAGNDTVSGG 551
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
G D+ L D + Q
Sbjct: 552 YGADS-------------------------------------LNGQDGNDSLLGGAQNDS 574
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
L+ A + L+ G D + G D+ + + D +
Sbjct: 575 LDGGAGNDSLLGEDGDDRLSDLSGADLLDGGAGDDLVIATDDPTSTAADTLLGGAGNDTL 634
Score = 41.3 bits (95), Expect = 0.48, Method: Composition-based stats.
Identities = 40/344 (11%), Positives = 75/344 (21%), Gaps = 12/344 (3%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ + I G D +D +G +L + + G + + ++
Sbjct: 45 IEGTDGRDFIDGGHGHDTIDG-GLGNDTLRGNLGADELTDFFGANTLHGGYGYDHLTALD 103
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE----NAIIVY 328
G ++ NN D G G D F Y + +
Sbjct: 104 AKGGASDLLDGGGNNDTLLGDDGDTLLGGDGTDYFRAYWTPGSTALTLSDFDPAGGERFS 163
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ +D ++ + + E V
Sbjct: 164 IEIDDAVTEETDFHLEAIEGGVNLILDGETVAWFEGGDIAALAPAVTLTQTDSDSSLHPT 223
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
+ L DD + + G +L+ A
Sbjct: 224 IPGEDETGTENADDLQGTEADDSIDGLAGNDTLD----GLAGADTLSGGADDDSLDGGAD 279
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
++ L G D + + + G D G+ A A
Sbjct: 280 NDALAGDDGADTLAGGAGDDTLAGGAGNDALAGDDGTDSLAGGAGDDTLDGGAGNDALA- 338
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
G L+ A ++ L AG D
Sbjct: 339 --GDDGTDSLAGSAGNDTLDGGAGNDALTGGDGTDSLAGGAGND 380
Score = 41.3 bits (95), Expect = 0.51, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 45/139 (32%), Gaps = 7/139 (5%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + IY G D + + G N S+ G + N ++ +
Sbjct: 518 PDTLTGTEADEAIYAHLGADTV----VAGAGNDTVSGGYGADSLNGQDGNDSLLGGAQND 573
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY---APSYLYKIYRFENAII 326
S+ G +GND ++G ++ + SG D+ DG +G D + +
Sbjct: 574 SLDGGAGNDSLLGEDGDDRLSDLSGADLLDGGAGDDLVIATDDPTSTAADTLLGGAGNDT 633
Query: 327 VYDANEHKQDFLSDVERLR 345
+ + +
Sbjct: 634 LVGDLLDTMTGGAGTDVFT 652
Score = 39.8 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 48/320 (15%), Positives = 75/320 (23%), Gaps = 15/320 (4%)
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
+N + G I + G+ G D + G ++ GND G+ G
Sbjct: 19 INGQDDDEDGAAAPAHKIFGDDDANEIEGTDGRDFIDGGHGHDTIDGGLGNDTLRGNLGA 78
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSI 361
D + + + + DA D L + + L D
Sbjct: 79 DELTDFFGANTLHGGYGYDHLTALDAKGGASDLLDGGGNNDTLLGDDGDTLLGGDGTDYF 138
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLG------SYDDLRNVF 415
Y + + D + E + + F G + +
Sbjct: 139 RAYWTPGSTALTLSDFDPAGGERFSIEIDDAVTEETDFHLEAIEGGVNLILDGETVAWFE 198
Query: 416 GSDRGA---AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
G D A A T + + +DL AD G D
Sbjct: 199 GGDIAALAPAVTLTQTDSDSSLHPTIPGEDETGTENADDLQGTEADDSIDGLAGNDTLDG 258
Query: 473 FGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
+ D L D + G D G AL
Sbjct: 259 LAGADTLSGGADDDS-LDGGADNDALAGDDGADTLA--GGAGDDTLAGGAGNDALAGDDG 315
Query: 533 HEDLINAFADAPDLVQAGKD 552
+ L D AG D
Sbjct: 316 TDSLAGGAGDDTLDGGAGND 335
>gi|165924836|ref|ZP_02220668.1| putative phage minor structural protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165937307|ref|ZP_02225871.1| putative phage minor structural protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010385|ref|ZP_02231283.1| putative phage minor structural protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|167399774|ref|ZP_02305292.1| putative phage minor structural protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167421932|ref|ZP_02313685.1| putative phage minor structural protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|165914781|gb|EDR33394.1| putative phage minor structural protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165923036|gb|EDR40187.1| putative phage minor structural protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990871|gb|EDR43172.1| putative phage minor structural protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166960069|gb|EDR56090.1| putative phage minor structural protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167050482|gb|EDR61890.1| putative phage minor structural protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|262360925|gb|ACY57646.1| virulence determinant [Yersinia pestis D106004]
Length = 3104
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 9/167 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL--TLIGGVKNYIDLNTESWSSI 253
G + G N + + + G+D + L L + + ID++ +S +
Sbjct: 2167 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 2226
Query: 254 GGY-EKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2227 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2284
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ H++ +E + + ++
Sbjct: 2285 GLAQ---GGTGLDSYHILKSTHEKSLQIRIEEVSENNNTDMQISNIF 2328
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 47/153 (30%), Gaps = 30/153 (19%)
Query: 274 SSGNDVVIGNSA----NNVFFESSGNDVFD-----------GSSGLDTFFYYAPSYLYKI 318
SSGND V+ SA N GND G G DT++Y A S I
Sbjct: 2631 SSGNDEVVITSATFLPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI 2690
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+Y LS ER + + V + + + D
Sbjct: 2691 ADTSGLDHLYLDKHILLHTLSA-ER-----RENNLVLNIADNT----SGRIIFVDWYLAD 2740
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ EF E ITFD L Y D
Sbjct: 2741 ENKV-----EFIWVEDSQITFDELFSLRPYSDE 2768
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 10/135 (7%)
Query: 274 SSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAIIVYDA 330
G+DV G + N+F SG + G DTF + S + + E V
Sbjct: 2146 GGGDDVAKGYHKKKNIFTIGSGFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALG 2205
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS-------YEDLIQVIGQDVFESM 383
+ S ++ ++ KQ ++L + + +I + M
Sbjct: 2206 EVLGNEIDSIIDISNGYYSQVNGGVEKQVALLYDFENILGHENVNDTIIGNDVDNYLNGM 2265
Query: 384 KHFYEFGLSEGRDIT 398
+ + G D+
Sbjct: 2266 GGDDKIWGNGGNDLL 2280
>gi|238760190|ref|ZP_04621336.1| serine protease [Yersinia aldovae ATCC 35236]
gi|238701569|gb|EEP94140.1| serine protease [Yersinia aldovae ATCC 35236]
Length = 1369
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/214 (19%), Positives = 70/214 (32%), Gaps = 10/214 (4%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM-DASFGYCATPMVSDIVAVQKIYG 196
G N G D +DS S + +D+++ G S I Q G
Sbjct: 394 GGSNTYIGNSGNDVFVISDSDDPSTIKGNGGRDTVLIVGDKGVALNMARSGITIAQGGDG 453
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
G N K T+ GG+D+L I
Sbjct: 454 DDIIVSGGNSSVF---IKGGNGNSTLVGGGGNDVLAGGGGKNKIIGGSSKA----VIYAG 506
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ +I + G D + GN N++ GN + DG G++ + Y
Sbjct: 507 SQGDSIYASEQGCIIYAGGGADRIYGNKGNDIIEAGQGNALIDGGGGVNVVSLHGTHADY 566
Query: 317 KIYRFENAIIVYD--ANEHKQDFLSDVERLRFAD 348
I R ++ ++ D A L ++++L F+D
Sbjct: 567 IITRTDSGYLIRDKVAGRDGTLALKNIQKLNFSD 600
Score = 44.0 bits (102), Expect = 0.082, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG + L+ + G +L T + G +TI I ++V GNDV+
Sbjct: 1242 GGRNTLNTAAMSGDVKA-NLITGEANLGGTT---LTIRSPQTIHNIVSGDGNDVLTAGRN 1297
Query: 286 NNVFFESSGNDVFDGSSGLDTFFY 309
N++ G + G +G + F
Sbjct: 1298 NSLLDGGRGRNTLVGGAGKEIFVV 1321
>gi|194709131|pdb|3BA0|A Chain A, Crystal Structure Of Full-Length Human Mmp-12
Length = 365
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 62/193 (32%), Gaps = 47/193 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH------ 76
W ++I Y+ + T D+ R A WS V L F + +
Sbjct: 4 WRKHYITYRINNYTPDMNREDVDY-------AIRKAFQVWSNVTPLKFSKINTGMADILV 56
Query: 77 --------SDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
D F S + +FD+ + W G GT L A+HEI
Sbjct: 57 VFARGAHGDDHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG-GTNLFLTAVHEI 115
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H P + Y+ T +S DI
Sbjct: 116 GHSLGLGHS-----SDPKAVMFPTYKYVDINTFRLS--------------------ADDI 150
Query: 189 VAVQKIYGAPKGS 201
+Q +YG PK +
Sbjct: 151 RGIQSLYGDPKEN 163
>gi|7305275|ref|NP_038931.1| matrix metalloproteinase-20 precursor [Mus musculus]
gi|12585270|sp|P57748|MMP20_MOUSE RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
Flags: Precursor
gi|6815255|gb|AAF28470.1|AF155933_1 matrix metalloproteinase-20 [Mus musculus]
gi|6815269|gb|AAF28472.1| matrix metalloproteinase-20 [Mus musculus]
gi|148692992|gb|EDL24939.1| matrix metallopeptidase 20 (enamelysin) [Mus musculus]
gi|156229730|gb|AAI52336.1| Matrix metallopeptidase 20 (enamelysin) [Mus musculus]
gi|156229732|gb|AAI52337.1| Matrix metallopeptidase 20 (enamelysin) [Mus musculus]
gi|182888447|gb|AAI60269.1| Matrix metallopeptidase 20 (enamelysin) [synthetic construct]
Length = 482
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 49/158 (31%), Gaps = 29/158 (18%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ T ++P + + AL WS V L F + +DI
Sbjct: 116 WKKNILTYRISKYTP--------SMSPTEVDKAIQMALHAWSTAVPLNFVRINSGEADIM 167
Query: 81 FISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ P + +FD A+ W G G L A
Sbjct: 168 ISFETGDHGDSYPFDGPRGTLAHAFAP--GEGLGGDTHFDNAEKWTMGT-NGFNLFTVAA 224
Query: 126 HEIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSV 162
HE GHALGL H YP Y N Y V
Sbjct: 225 HEFGHALGLGHSTDPSALMYPTYKYQNPYRFHLPKDDV 262
>gi|260430639|ref|ZP_05784611.1| beta-Ig-H3/fasciclin [Silicibacter lacuscaerulensis ITI-1157]
gi|260418080|gb|EEX11338.1| beta-Ig-H3/fasciclin [Silicibacter lacuscaerulensis ITI-1157]
Length = 555
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 4/135 (2%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
++ G D + G N + G + + +
Sbjct: 389 SGSDLVLAGAGNDRVFGGSGSDTVK----GEAGNDFVFGGRGKDDLSGGDGHDRLFGGRG 444
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+++ G G+D V G +++ +GND G G D F + I+ F
Sbjct: 445 RDTISGGDGDDTVFGGHGSDMIAGGAGNDRLFGGGGADHFAFAHGDGTDVIFGFRAGQDK 504
Query: 328 YDANEHKQDFLSDVE 342
D + + ++E
Sbjct: 505 IDLSSYGFTDFHELE 519
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 55/185 (29%), Gaps = 17/185 (9%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
L G + + I N + + V SG+D+V+ + N+ F
Sbjct: 347 LPSSGAGDVDFVIGDDGRDRIWTGRDNDLVDAKGGNDVVWAGSGSDLVLAGAGNDRVFGG 406
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
SG+D G +G D F + + + ++ +D +S D
Sbjct: 407 SGSDTVKGEAGND--FVFGGRGKDDLSGGDGHDRLFGG--RGRDTISG------GDGDDT 456
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR 412
++ A + L G D + F +G D+ F D
Sbjct: 457 VFGGHGSDMIAGGAGNDRLFGGGGAD-------HFAFAHGDGTDVIFGFRAGQDKIDLSS 509
Query: 413 NVFGS 417
F
Sbjct: 510 YGFTD 514
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 43/149 (28%), Gaps = 7/149 (4%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
I+ +DL+D N + + N + + ++
Sbjct: 356 DFVIGDDGRDRIWTGRDNDLVDAKG----GNDVVWAGSGSDLVLAGAGNDRVFGGSGSDT 411
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V G +GND V G + G+D G G DT ++ + ++
Sbjct: 412 VKGEAGNDFVFGGRGKDDLSGGDGHDRLFGGRGRDTI--SGGDGDDTVFGGHGSDMIAGG 469
Query: 331 NEHKQDFLSDV-ERLRFADQCIDSVNVKQ 358
+ + F + FA V
Sbjct: 470 AGNDRLFGGGGADHFAFAHGDGTDVIFGF 498
>gi|162418635|ref|YP_001604775.1| putative phage minor structural protein [Yersinia pestis Angola]
gi|162351450|gb|ABX85398.1| putative phage minor structural protein [Yersinia pestis Angola]
Length = 3104
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 9/167 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL--TLIGGVKNYIDLNTESWSSI 253
G + G N + + + G+D + L L + + ID++ +S +
Sbjct: 2167 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 2226
Query: 254 GGY-EKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2227 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2284
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ H++ +E + + ++
Sbjct: 2285 GLAQ---GGTGLDSYHILKSTHEKSLQIRIEEVSENNNTDMQISNIF 2328
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 47/153 (30%), Gaps = 30/153 (19%)
Query: 274 SSGNDVVIGNSA----NNVFFESSGNDVFD-----------GSSGLDTFFYYAPSYLYKI 318
SSGND V+ SA N GND G G DT++Y A S I
Sbjct: 2631 SSGNDEVVITSATFLPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI 2690
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+Y LS ER + + V + + + D
Sbjct: 2691 ADTSGLDHLYLDKHILLHTLSA-ER-----RENNLVLNIADNT----SGRIIFVDWYLAD 2740
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ EF E ITFD L Y D
Sbjct: 2741 ENKV-----EFIWVEDSQITFDELFSLRPYSDE 2768
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 10/135 (7%)
Query: 274 SSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAIIVYDA 330
G+DV G + N+F SG + G DTF + S + + E V
Sbjct: 2146 GGGDDVAKGYHKKKNIFTIGSGFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALG 2205
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS-------YEDLIQVIGQDVFESM 383
+ S ++ ++ KQ ++L + + +I + M
Sbjct: 2206 EVLGNEIDSIIDISNGYYSQVNGGVEKQVALLYDFENILGHENVNDTIIGNDVDNYLNGM 2265
Query: 384 KHFYEFGLSEGRDIT 398
+ + G D+
Sbjct: 2266 GGDDKIWGNGGNDLL 2280
>gi|4505205|ref|NP_002416.1| stromelysin-2 preproprotein [Homo sapiens]
gi|116869|sp|P09238|MMP10_HUMAN RecName: Full=Stromelysin-2; Short=SL-2; AltName: Full=Matrix
metalloproteinase-10; Short=MMP-10; AltName:
Full=Transin-2; Flags: Precursor
gi|36629|emb|CAA30679.1| unnamed protein product [Homo sapiens]
gi|12803527|gb|AAH02591.1| Matrix metallopeptidase 10 (stromelysin 2) [Homo sapiens]
gi|30583723|gb|AAP36110.1| matrix metalloproteinase 10 (stromelysin 2) [Homo sapiens]
gi|51988876|gb|AAU21039.1| matrix metalloproteinase 10 (stromelysin 2) [Homo sapiens]
gi|60655137|gb|AAX32132.1| matrix metalloproteinase 10 [synthetic construct]
gi|119587433|gb|EAW67029.1| matrix metallopeptidase 10 (stromelysin 2) [Homo sapiens]
gi|123982056|gb|ABM82857.1| matrix metallopeptidase 10 (stromelysin 2) [synthetic construct]
gi|123996885|gb|ABM86044.1| matrix metallopeptidase 10 (stromelysin 2) [synthetic construct]
gi|189054156|dbj|BAG36676.1| unnamed protein product [Homo sapiens]
Length = 476
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 55/194 (28%), Gaps = 46/194 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 108 WRKTHLTYRIVNYTPDLP-------RDAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMI 160
Query: 73 ---TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F + + +I+FD + W GT L A HE+
Sbjct: 161 SFAVKEHGDFYSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWTED-ASGTNLFLVAAHEL 219
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H S T + Y + A F D+
Sbjct: 220 GHSLGLFH--------------------SANTEALMYPLYNSFTELAQFRLSQ----DDV 255
Query: 189 VAVQKIYGAPKGSL 202
+Q +YG P S
Sbjct: 256 NGIQSLYGPPPAST 269
>gi|22127209|ref|NP_670632.1| hypothetical protein y3333 [Yersinia pestis KIM 10]
gi|108806315|ref|YP_650231.1| putative virulence determinant [Yersinia pestis Antiqua]
gi|108813304|ref|YP_649071.1| virulence determinant [Yersinia pestis Nepal516]
gi|149367044|ref|ZP_01889077.1| putative virulence determinant [Yersinia pestis CA88-4125]
gi|166212770|ref|ZP_02238805.1| putative phage minor structural protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|218928119|ref|YP_002345994.1| putative virulence determinant [Yersinia pestis CO92]
gi|229840866|ref|ZP_04461025.1| putative virulence determinant [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229842573|ref|ZP_04462728.1| putative virulence determinant [Yersinia pestis biovar Orientalis
str. India 195]
gi|229903767|ref|ZP_04518880.1| putative virulence determinant [Yersinia pestis Nepal516]
gi|294502890|ref|YP_003566952.1| putative virulence determinant [Yersinia pestis Z176003]
gi|21960276|gb|AAM86883.1|AE013934_6 hypothetical [Yersinia pestis KIM 10]
gi|108776952|gb|ABG19471.1| virulence determinant [Yersinia pestis Nepal516]
gi|108778228|gb|ABG12286.1| putative virulence determinant [Yersinia pestis Antiqua]
gi|115346730|emb|CAL19613.1| putative virulence determinant [Yersinia pestis CO92]
gi|149290658|gb|EDM40734.1| putative virulence determinant [Yersinia pestis CA88-4125]
gi|166206062|gb|EDR50542.1| putative phage minor structural protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|229679537|gb|EEO75640.1| putative virulence determinant [Yersinia pestis Nepal516]
gi|229690883|gb|EEO82937.1| putative virulence determinant [Yersinia pestis biovar Orientalis
str. India 195]
gi|229697232|gb|EEO87279.1| putative virulence determinant [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|262364866|gb|ACY61423.1| putative virulence determinant [Yersinia pestis D182038]
gi|294353349|gb|ADE63690.1| putative virulence determinant [Yersinia pestis Z176003]
Length = 3110
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 9/167 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL--TLIGGVKNYIDLNTESWSSI 253
G + G N + + + G+D + L L + + ID++ +S +
Sbjct: 2173 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 2232
Query: 254 GGY-EKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2233 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2290
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ H++ +E + + ++
Sbjct: 2291 GLAQ---GGTGLDSYHILKSTHEKSLQIRIEEVSENNNTDMQISNIF 2334
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 47/153 (30%), Gaps = 30/153 (19%)
Query: 274 SSGNDVVIGNSA----NNVFFESSGNDVFD-----------GSSGLDTFFYYAPSYLYKI 318
SSGND V+ SA N GND G G DT++Y A S I
Sbjct: 2637 SSGNDEVVITSATFLPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI 2696
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+Y LS ER + + V + + + D
Sbjct: 2697 ADTSGLDHLYLDKHILLHTLSA-ER-----RENNLVLNIADNT----SGRIIFVDWYLAD 2746
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ EF E ITFD L Y D
Sbjct: 2747 ENKV-----EFIWVEDSQITFDELFSLRPYSDE 2774
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 10/135 (7%)
Query: 274 SSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAIIVYDA 330
G+DV G + N+F SG + G DTF + S + + E V
Sbjct: 2152 GGGDDVAKGYHKKKNIFTIGSGFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALG 2211
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS-------YEDLIQVIGQDVFESM 383
+ S ++ ++ KQ ++L + + +I + M
Sbjct: 2212 EVLGNEIDSIIDISNGYYSQVNGGVEKQVALLYDFENILGHENVNDTIIGNDVDNYLNGM 2271
Query: 384 KHFYEFGLSEGRDIT 398
+ + G D+
Sbjct: 2272 GGDDKIWGNGGNDLL 2286
>gi|284008407|emb|CBA74840.1| RTX-family protein [Arsenophonus nasoniae]
Length = 1358
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 70/209 (33%), Gaps = 7/209 (3%)
Query: 225 SGGDDLL-DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
G+D++ DL+ + N I+ + + + N I + V + GN++++
Sbjct: 1141 MAGNDIITDLSGRDNIDNIINAGSG-DDMVTVIKGNNIIDAGPGDDIVATAKGNNIILPG 1199
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N++ G+D ++G D + I I + A ++ + +
Sbjct: 1200 EGNDIVNSGIGDDTIITTNGNDEINCGKGNNAIFINHQVGHITINCAGGSDTIYIQNFDH 1259
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF--GLSEGRDITFDS 401
F+D I + +Y +D I + + G++ G + D+
Sbjct: 1260 Y-FSDGNIR--YYIADNQQDYFIKSKDKKSSITIKNAVANDDKVKIYRGINNGNYLDSDN 1316
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHG 430
L N +I +G
Sbjct: 1317 INILIDKLSDFNKRKDRASLNLIEFINNG 1345
Score = 43.6 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 269 ESV-VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
E+V V ++ D+++G++ +NV + GND G G DT
Sbjct: 699 ENVTVVANSADIIVGDARDNVLDGNLGNDRLYGGKGNDTLILTQGIAD 746
>gi|320013971|gb|ADV97542.1| putative virulence determinant [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 3110
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 9/167 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL--TLIGGVKNYIDLNTESWSSI 253
G + G N + + + G+D + L L + + ID++ +S +
Sbjct: 2173 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 2232
Query: 254 GGY-EKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2233 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2290
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ H++ +E + + ++
Sbjct: 2291 GLAQ---GGTGLDSYHILKSTHEKSLQIRIEEVSENNNTDMQISNIF 2334
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 47/153 (30%), Gaps = 30/153 (19%)
Query: 274 SSGNDVVIGNSA----NNVFFESSGNDVFD-----------GSSGLDTFFYYAPSYLYKI 318
SSGND V+ SA N GND G G DT++Y A S I
Sbjct: 2637 SSGNDEVVITSATFLPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI 2696
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+Y LS ER + + V + + + D
Sbjct: 2697 ADTSGLDHLYLDKHILLHTLSA-ER-----RENNLVLNIADNT----SGRIIFVDWYLAD 2746
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ EF E ITFD L Y D
Sbjct: 2747 ENKV-----EFIWVEDSQITFDELFSLRPYSDE 2774
Score = 39.8 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 10/135 (7%)
Query: 274 SSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAIIVYDA 330
G+DV G + N+F SG + G DTF + S + + E V
Sbjct: 2152 GGGDDVAKGYHKKKNIFTIGSGFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALG 2211
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS-------YEDLIQVIGQDVFESM 383
+ S ++ ++ KQ ++L + + +I + M
Sbjct: 2212 EVLGNEIDSIIDISNGYYSQVNGGVEKQVALLYDFENILGHENVNDTIIGNDVDNYLNGM 2271
Query: 384 KHFYEFGLSEGRDIT 398
+ + G D+
Sbjct: 2272 GGDDKIWGNGGNDLL 2286
>gi|73853842|ref|NP_001027506.1| matrix metallopeptidase 13 (collagenase 3) [Xenopus (Silurana)
tropicalis]
gi|67867494|gb|AAH98086.1| hypothetical protein mgc108008 [Xenopus (Silurana) tropicalis]
Length = 261
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 42/133 (31%), Gaps = 22/133 (16%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS------ 74
Q W+ + Y+ T + E R A WS V L F S
Sbjct: 100 QRWTKTQLTYRIVNYTPDLPRSMVDE-------AIRLAFKVWSDVTPLKFTRISSRRADI 152
Query: 75 -------IHSD-IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
H D I F N S + +FD+ + W G L A H
Sbjct: 153 MIQFGARSHGDFIPFDGPNGVLAHAFAPGSGIGGDAHFDEDERWTSTSA-GFNLFLVAAH 211
Query: 127 EIGHALGLMHPGS 139
E GH+LGL H
Sbjct: 212 EFGHSLGLDHSRD 224
>gi|47202237|emb|CAF87535.1| unnamed protein product [Tetraodon nigroviridis]
Length = 279
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 45/139 (32%), Gaps = 34/139 (24%)
Query: 26 YFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------TSIH 76
YF + T E R A W V+ LTF E +
Sbjct: 115 YFSSASIENYTPKVGK-------QATYEAIRKAFKVWESVIPLTFREIPYSQIKNKVDRY 167
Query: 77 SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKG-TIL 120
+DI + + P + + +FD A+ W G +G +
Sbjct: 168 ADIMLSFAEGFHGDSSPFDGEGGFLAHAFFP--GNGIGGDTHFDLAEPWTVGPDQGGNDV 225
Query: 121 SHNALHEIGHALGLMHPGS 139
A+HE+GHALGL H
Sbjct: 226 FLVAVHELGHALGLEHSND 244
>gi|27378220|ref|NP_769749.1| Ca binding protein [Bradyrhizobium japonicum USDA 110]
gi|27351367|dbj|BAC48374.1| bll3109 [Bradyrhizobium japonicum USDA 110]
Length = 917
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/233 (13%), Positives = 67/233 (28%), Gaps = 31/233 (13%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL-NTESWSSIG 254
G + G K + + + G+D + + G +L ++
Sbjct: 31 GTIVVNGGAVAIKGGPATVANTKLIQAFGQDGNDTITIDESNGAMPAANLFGGAGNDTLT 90
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + + ++++G GND++ G + N+V GND G +G D +
Sbjct: 91 GGSGGDMLFGQSGNDTLLGKGGNDLLFGGAGNDVLIGGDGNDQMFGEAGNDRMIWNPGDD 150
Query: 315 LYKIYRFENAIIVYDANEHKQDFLS---DVERLRF-------------ADQCIDSVNVKQ 358
+ E + + S + R+RF + +
Sbjct: 151 SDLMEGGEGIDTAEVNGGNGSETFSITANGTRVRFDRVDPAPFSLDIGTTENLVVHAGGG 210
Query: 359 RS--------------ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
L+ A + ++ G D ++G D
Sbjct: 211 DDTITASGNLAALITLTLDGGAGNDTILGGNGADYLLGGDGNDFIDGNQGNDT 263
Score = 54.4 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 71/540 (13%), Positives = 138/540 (25%), Gaps = 65/540 (12%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPG 138
I T + + D D G T +
Sbjct: 224 ITLTLDGGAGNDTILGGNGADYLLGGDGNDFIDGNQGNDTAMLGAGND--TFQWDPGDGS 281
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
G ++ V+S +++ G + G
Sbjct: 282 DKVEGQAGADTLLFNGSNIGENIVVSAGNDGRTLLTRDVGNITMDLNGIETITINARGGS 341
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ NN+ +V+Q + T G D + L + + S+ G
Sbjct: 342 DNIVVNNLAGTDVKQVNVDLGSTGTGDGAADTVTLDGTSAADTIQVSGSGTSISVTGLPA 401
Query: 259 NMTI--------------------------AQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ I A V ++ G +GND ++G++ ++
Sbjct: 402 ALAITNAEGANDALVIDGLGGNDTISAATLAAGVVHLTIDGGAGNDTIVGSAGDDTLIGG 461
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID 352
GND G G D A +++ + + + + V+ L+F+ +
Sbjct: 462 DGNDSVVGGRGNDLVQLGAGRDMFQWNPGDGSDTIEGG--------AGVDTLQFSGANVA 513
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFE--SMKHFYEFGLSEGRDITFDSYLYLGSYDD 410
I+ + L + +G + ++H L D
Sbjct: 514 E-----NLIITANGDHALLTRDVGNITMDLHGVEHVDIHALG---------------GAD 553
Query: 411 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
V R I G G A + A+ + F A + V
Sbjct: 554 HIVVGDLTGTDVTRVNIDLGGSAGTPDGAIDTVTVDATQG--ADTFGVAGNAGGVTIFGL 611
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYI-THGVKEGRNPDAFKALEY 529
T L DD+ + G G G R +
Sbjct: 612 HAATNLASMDATDQLTLNGLGGDDVIDASGLAAGVLQLTINGGLGNDTIRGSQGDDLING 671
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSA 589
++ + + + G D+ + G ++ FN + + N+F + A
Sbjct: 672 GDGNDVALMGAGNDTFVWNPGDDNDTIEGQGGTDTLLFNG----ANIAETINIFANGSRA 727
Score = 44.8 bits (104), Expect = 0.054, Method: Composition-based stats.
Identities = 62/489 (12%), Positives = 122/489 (24%), Gaps = 76/489 (15%)
Query: 91 TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVD 150
T + + D G G +++ + G +N G ++
Sbjct: 439 TIDGGAGNDTIVGSAGDDTLIGGDGNDSVVGGRGNDLVQLGAG-RDMFQWNPGDGSDTIE 497
Query: 151 NDYENDSFLTSVMSYFMPQDSMMDASFGYCA-------------------TPMVSDIVAV 191
D+ S + + +D + V
Sbjct: 498 GGAGVDTLQFSGANVAENLIITANGDHALLTRDVGNITMDLHGVEHVDIHALGGADHIVV 557
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
+ G + ++ + T+ + G D + G L+ +
Sbjct: 558 GDLTGTDVTRVNIDLGGSAGTPDGAIDTVTVDATQGADTFGVAGNAGGVTIFGLHAATNL 617
Query: 252 SIGGYEKNMTI--------------AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ +T+ A + ++ G GND + G+ +++ GNDV
Sbjct: 618 ASMDATDQLTLNGLGGDDVIDASGLAAGVLQLTINGGLGNDTIRGSQGDDLINGGDGNDV 677
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+G DTF + I + + + ++ FA+ +
Sbjct: 678 ALMGAGNDTFVWNPGDDNDTIEGQGGTDTLLFNGANIAETIN-----IFANGSRAELTRD 732
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
SI T E + G G D+T G +
Sbjct: 733 VASITMDTHGVETIAFNA-----RGGADTINVGDMSGTDVTEVKIDLGGVPGTPGGDGAA 787
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D+ G D +L ++ +I+ A + +
Sbjct: 788 DKIVI----------NGTGGDDVISLSLNSNGALVIDGLASQIVIENFDFNDTITINGLG 837
Query: 478 GRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 537
G DD+ G G H I G L A ++ L+
Sbjct: 838 G--------------DDVIEASGVGPGG--PHLIFDG------GAGDDLLLGSAGNDTLL 875
Query: 538 NAFADAPDL 546
D +
Sbjct: 876 GGLGDDVLI 884
>gi|224076199|ref|XP_002193372.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 477
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/193 (21%), Positives = 60/193 (31%), Gaps = 46/193 (23%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SD 78
W + Y+ ++ ++ + R A WS V L F E +D
Sbjct: 85 GGRWYKRHLTYRVVNWPSYLPQHEV-------RLAVRAAFQLWSNVSSLRFGEARGGPAD 137
Query: 79 IKFIS----SNNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNALH 126
I+ N+G E +FD A+ W GKG L H
Sbjct: 138 IRLTFFHGDHNDGLSNAFDGPGGALAHAFFPRRGEAHFDSAERWSLHSGKGRNLFIVVAH 197
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH LGL H + Y V+S+
Sbjct: 198 EVGHTLGLQHSPVKSALMSPYYKKLS------KDFVLSWD-------------------- 231
Query: 187 DIVAVQKIYGAPK 199
DI+A+Q +YG P
Sbjct: 232 DILAIQNLYGKPS 244
>gi|51597529|ref|YP_071720.1| pore forming RTX toxin family protein [Yersinia pseudotuberculosis IP
32953]
gi|51590811|emb|CAH22457.1| pore forming RTX toxin family protein [Yersinia pseudotuberculosis IP
32953]
Length = 3103
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 9/167 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL--TLIGGVKNYIDLNTESWSSI 253
G + G N + + + G+D + L L + + ID++ +S +
Sbjct: 2166 GFKQYQGGENADTFILTSAAASKSHILSGGEGNDTVALGEVLGNEIDSIIDISKGYYSQV 2225
Query: 254 GGY-EKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2226 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2283
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ H++ +E + + ++
Sbjct: 2284 GLAQ---GGTGLDSYHILKSTHEKSLQIRIEEVSENNNTDMQISNIF 2327
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 49/153 (32%), Gaps = 30/153 (19%)
Query: 274 SSGNDVVIGNSA----NNVFFESSGNDVFD-----------GSSGLDTFFYYAPSYLYKI 318
SSGND V+ NSA N GND G G DT++Y A S I
Sbjct: 2630 SSGNDEVVINSATFLPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI 2689
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+Y LS ER + + V + + + D
Sbjct: 2690 ADTSGLDHLYLDKHILLHTLSA-ER-----RENNLVLNIADNT----SGRIIFVDWYLAD 2739
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ +F EG ITFD L Y D
Sbjct: 2740 ENKV-----DFIWVEGSQITFDELFSLCPYSDE 2767
Score = 40.2 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 10/135 (7%)
Query: 274 SSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--LYKIYRFENAIIVYDA 330
G+DV G + N+F SG + G DTF + + + + E V
Sbjct: 2145 GGGDDVAKGYHKKKNIFTIGSGFKQYQGGENADTFILTSAAASKSHILSGGEGNDTVALG 2204
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS-------YEDLIQVIGQDVFESM 383
+ S ++ + ++ KQ ++L + + +I + M
Sbjct: 2205 EVLGNEIDSIIDISKGYYSQVNGGVEKQVALLYDFENILGHENVNDTIIGNDVDNYLNGM 2264
Query: 384 KHFYEFGLSEGRDIT 398
+ + G D+
Sbjct: 2265 GGDDKIWGNGGNDLL 2279
>gi|28198226|ref|NP_778540.1| hemolysin-type calcium binding protein [Xylella fastidiosa Temecula1]
gi|182680862|ref|YP_001829022.1| hemolysin-type calcium binding domain-containing protein [Xylella
fastidiosa M23]
gi|28056296|gb|AAO28189.1| hemolysin-type calcium binding protein [Xylella fastidiosa Temecula1]
gi|182630972|gb|ACB91748.1| Haemolysin-type calcium binding domain protein [Xylella fastidiosa
M23]
gi|307579328|gb|ADN63297.1| hemolysin-type calcium binding domain-containing protein [Xylella
fastidiosa subsp. fastidiosa GB514]
Length = 1607
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/426 (12%), Positives = 114/426 (26%), Gaps = 66/426 (15%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
NG+ S + AD + + G G E G A L+
Sbjct: 1126 NGWNNVLNGGSGDDLLYGSFFADTYLFNKGDGRDTLI----EQGGADKLVFGAGIIASQV 1181
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
+ S M D + +I + A +
Sbjct: 1182 RLLHEGQDVVLDLGNGHDSIRMKDWLTSDGEYN-----RTGNIEEILF---ADGTRWTGD 1233
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
T + + G+D L S + G + ++
Sbjct: 1234 TLGWRE--------MTTFGTSGNDTLQ-------------GWGSSDILLGGNGDDVLSGD 1272
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF----------FYYAPSYL 315
+++ G +G+D+++G++ N+V G++ +G +G D + +
Sbjct: 1273 YGDDTLYGEAGDDLLLGDNGNDVLDGGEGHNRLEGGAGKDVLKVSTDGSSDNVFSGGTGD 1332
Query: 316 YKIYRFENAIIVYDANEHKQDFLS---DVERLRFADQ----CIDSVNVKQRSILEYTASY 368
+Y ++ +D + +++ F ++ I + Q +L+ Y
Sbjct: 1333 DMLYGSVHSDTYLFNRGDGRDTIVEQGGFDKIVFGEEIAVSDIHVLREGQDVVLDLYNGY 1392
Query: 369 E-----DLIQVIGQDVFESM-------KHFYEFG---LSEGRDITFDSYLYLGSYDDLRN 413
+ D + G + G S G + + + RN
Sbjct: 1393 DSIRLKDWLTSDGTRNSNADIEQIVFADGTVWSGETLSSIGLKTLGSADNDTLNGWNGRN 1452
Query: 414 V-FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
+ G D + + + Y +S+ D + +
Sbjct: 1453 ILVGEDGDDVLKVSMFDSSDNVLVGCRGNDMLYGSSNSDTYFFDQGDGHDTIIEQGGADT 1512
Query: 473 FGCEEG 478
EG
Sbjct: 1513 LEFGEG 1518
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 68/441 (15%), Positives = 117/441 (26%), Gaps = 82/441 (18%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
NG+ S + AD + + G G H+ L E G A L+
Sbjct: 961 NGWNNVLNGGSGDDLLYGSFFADTYLFNKGDG----HDTLIEQGGADKLV---------- 1006
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
+ V QD ++D G + + D + YGA S
Sbjct: 1007 -------FGVGIVANQVRLLREGQDVVLDLGNG-QDSIRLKDWLT---FYGARNHSADIE 1055
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
T++ L LT +G N I + + G + + +
Sbjct: 1056 QIVFADG--------TVWTGETLSTLGLTTLGTSGNDILNGWQGNDLLLGGDGDDVLDGG 1107
Query: 266 TVIESVVGSSGNDVV-IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ G +G+DV+ + N NNV SG+D+ GS DT+ + + A
Sbjct: 1108 EGSNRLEGGAGHDVLNVANGWNNVLNGGSGDDLLYGSFFADTYLFNKGDGRDTLIEQGGA 1167
Query: 325 IIVYDAN--------------------EHKQDFLS---------------DVERLRFADQ 349
+ + D + ++E + FAD
Sbjct: 1168 DKLVFGAGIIASQVRLLHEGQDVVLDLGNGHDSIRMKDWLTSDGEYNRTGNIEEILFADG 1227
Query: 350 C-----------IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ + L+ S + L+ G DV G D+
Sbjct: 1228 TRWTGDTLGWREMTTFGTSGNDTLQGWGSSDILLGGNGDDVLSGDYGDDTLYGEAGDDLL 1287
Query: 399 FDS--YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
L + + G + + + Y + H D
Sbjct: 1288 LGDNGNDVLDGGEGHNRLEGGAGKDVLKVSTDGSSDNVFSGGTGDDMLYGSVHSDTYLFN 1347
Query: 457 ADAPDLVQVGKDHFSNFGCEE 477
V + F E
Sbjct: 1348 RGDGRDTIVEQGGFDKIVFGE 1368
Score = 44.8 bits (104), Expect = 0.047, Method: Composition-based stats.
Identities = 55/402 (13%), Positives = 100/402 (24%), Gaps = 87/402 (21%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV-IGNSANNVFFESSG 294
G + + G + + + + G +G+DV+ + N NNV SG
Sbjct: 913 FGDAGANLLRGGGGDDVLSGGDGDDVLDGGEGSNRLEGGAGHDVLNVANGWNNVLNGGSG 972
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFEN--------------------AIIVYDANEHK 334
+D+ GS DT+ + + V +
Sbjct: 973 DDLLYGSFFADTYLFNKGDGHDTLIEQGGADKLVFGVGIVANQVRLLREGQDVVLDLGNG 1032
Query: 335 QDFLS---------------DVERLRFADQCI-----------DSVNVKQRSILEYTASY 368
QD + D+E++ FAD + ++ IL
Sbjct: 1033 QDSIRLKDWLTFYGARNHSADIEQIVFADGTVWTGETLSTLGLTTLGTSGNDILNGWQGN 1092
Query: 369 EDLIQVI---------GQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSYDDLRNV 414
+ L+ G + E ++ G + D LY + D
Sbjct: 1093 DLLLGGDGDDVLDGGEGSNRLEGGAGHDVLNVANGWNNVLNGGSGDDLLYGSFFADTYLF 1152
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
D G + A + HE + +
Sbjct: 1153 NKGDGRDTL--IEQGGADKLVFGAGIIASQVRLLHEGQDVVLDLGNGHDSIRMKDWLTSD 1210
Query: 475 CEEGRFVTFDSYLYLGSY---DDL-----RNVFGSDRGAAARHYITHGVKEGRNPDAFKA 526
E R + L+ D FG+ + + + + G N D +
Sbjct: 1211 GEYNRTGNIEEILFADGTRWTGDTLGWREMTTFGTSGNDTLQGWGSSDILLGGNGDDVLS 1270
Query: 527 LEYIA----------------SHEDLINAFADAPDLVQAGKD 552
+Y ++ L AGKD
Sbjct: 1271 GDYGDDTLYGEAGDDLLLGDNGNDVLDGGEGHNRLEGGAGKD 1312
Score = 42.1 bits (97), Expect = 0.30, Method: Composition-based stats.
Identities = 47/332 (14%), Positives = 94/332 (28%), Gaps = 52/332 (15%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI---- 128
T+ + G + + D G +L N +
Sbjct: 1241 TTFGTSGNDTLQGWGSSDILLGGNGDDVLSGDYGDDTLYGEAGDDLLLGDNGNDVLDGGE 1300
Query: 129 GHA----------LGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
GH L + GS N G D Y + T + + +D++++
Sbjct: 1301 GHNRLEGGAGKDVLKVSTDGSSDNVFSGGTGDDMLYGSVHSDTYLFNRGDGRDTIVEQGG 1360
Query: 178 GYCATPM----VSDIVAVQK-------IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
VSDI +++ +Y + + + + I+ I +
Sbjct: 1361 FDKIVFGEEIAVSDIHVLREGQDVVLDLYNGYDSIRLKDWLTSDGTRNSNADIEQIVFAD 1420
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS---SGNDVVIGN 283
G TL L + ++ G+ + + + S S ++V++G
Sbjct: 1421 GTVWSGETLSSIGLKT--LGSADNDTLNGWNGRNILVGEDGDDVLKVSMFDSSDNVLVGC 1478
Query: 284 SANNVFFE-----------SSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAIIVYDA 330
N++ + G+D G DT + R + + +
Sbjct: 1479 RGNDMLYGSSNSDTYFFDQGDGHDTIIEQGGADTLEFGEGLHREEACFTRSGDDLSILFN 1538
Query: 331 NEHKQDFLSD--------VERLRFADQCIDSV 354
Q ++ VE L F D + S
Sbjct: 1539 GSEDQVTVAGWFSEAAHQVESLVFQDGTVLSG 1570
Score = 38.6 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 27/95 (28%), Gaps = 26/95 (27%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDV------------------FDGSSGLDTF---- 307
+ GS+ D++ G++ N+ G+DV +G +G D
Sbjct: 902 NAEGSAAMDLLFGDAGANLLRGGGGDDVLSGGDGDDVLDGGEGSNRLEGGAGHDVLNVAN 961
Query: 308 ----FYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
S +Y A D L
Sbjct: 962 GWNNVLNGGSGDDLLYGSFFADTYLFNKGDGHDTL 996
>gi|327269197|ref|XP_003219381.1| PREDICTED: stromelysin-1-like [Anolis carolinensis]
Length = 461
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 58/190 (30%), Gaps = 51/190 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + Y+ T E+ +++ R A WS+V LTF +DI
Sbjct: 104 WGKKDLTYRILNYTPDM------EIQDVDKDIER-AFKVWSRVSPLTFTRVLQGDADILI 156
Query: 82 ISS---------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ P S + +FD+ + W +G+ +G+ L A H
Sbjct: 157 SFGSRDHGDFNPFDGPGGTVAHAYAPS--SGIGGDAHFDEDENWSHGL-EGSNLFFVAAH 213
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E GH+LGL H N +
Sbjct: 214 EFGHSLGLYHSNDPNAVMFPVYRQPELGQQI-------------------------LAQD 248
Query: 187 DIVAVQKIYG 196
DI +Q +YG
Sbjct: 249 DIQGIQHLYG 258
>gi|109109582|ref|XP_001086245.1| PREDICTED: stromelysin-2 [Macaca mulatta]
Length = 476
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 56/194 (28%), Gaps = 46/194 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T+ A+ W +V LTF
Sbjct: 108 WRKTHLTYRIVNYTSDLPG-------DAVDSAIEKAVKVWEEVTPLTFSRLYEGEADIMI 160
Query: 73 ---TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F S + + +I+FD + W GT L A HE+
Sbjct: 161 SFAVKEHGDFYSFDGSGHSLAHAYPPGPGLYGDIHFDDDEHWTED-ASGTNLFFVAAHEL 219
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H S T + Y + F D+
Sbjct: 220 GHSLGLFH--------------------SANTEALMYPLYNSFTELTRFHLSQ----DDV 255
Query: 189 VAVQKIYGAPKGSL 202
+Q +YG P S
Sbjct: 256 NGIQSLYGPPPAST 269
>gi|72383239|ref|YP_292594.1| peptidyl-prolyl cis-trans isomerase [Prochlorococcus marinus str.
NATL2A]
gi|72003089|gb|AAZ58891.1| putative Peptidyl-prolyl cis-trans isomerase (rotamase) -
cyclophilin family [Prochlorococcus marinus str. NATL2A]
Length = 595
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/315 (16%), Positives = 94/315 (29%), Gaps = 9/315 (2%)
Query: 143 GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSL 202
G P + N S S+ S P++ + Q Y +
Sbjct: 186 GQPDSATSEWFINLSDNKSLDSQNEGFSVFGHLLGDSIENPLLLN---SQSKYNVNYNEV 242
Query: 203 GNNIYKIE-VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G NI ++ + + T Y + +KN ++ + + G
Sbjct: 243 GLNIPELPLNNVEGNVINNTNYFAIHSISTISQRPSEIKNVFNVIVTANDTNGNQSNQYV 302
Query: 262 IAQHTVI--ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
I I E + G G D + G N+ F + GND DG + D Y Y
Sbjct: 303 IVNVKDIQGEVLNGIDGQDALNGGLGNDTFQGNGGNDTIDGGNDFDIAIYTGNFSDYTFT 362
Query: 320 RFENAIIVYDANE---HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
+ + D D L+++E+L FAD+ + + + I E +
Sbjct: 363 IANKILTISDNRSLINDGIDTLTNIEKLTFADKNALITSKEIKPIDALGFQAERVYSGKS 422
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 436
+G+ I + + +DD + +D A G+
Sbjct: 423 DSYKFYDLGSDNYGVGTSTGIDELTGESILKFDDKKMNLKNDIKATFDQVTGLDTDSGKM 482
Query: 437 PDAFKALEYIASHED 451
+ A D
Sbjct: 483 FRLYNASFKRLPDPD 497
>gi|254487952|ref|ZP_05101157.1| hypothetical protein RGAI101_2612 [Roseobacter sp. GAI101]
gi|214044821|gb|EEB85459.1| hypothetical protein RGAI101_2612 [Roseobacter sp. GAI101]
Length = 581
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/355 (14%), Positives = 85/355 (23%), Gaps = 30/355 (8%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ P T+ G D+L D L GG + S+ G N T+
Sbjct: 102 GDDTLNGGPQADTLDGGAGADVLTGFGDDDLLQGGDGPDLLRGGTGNDSLSGENGNDTLD 161
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+S+ G+ G+D + G + +G D DG G DT F + F
Sbjct: 162 GGAGNDSLEGNFGDDSLAGFGGEDTLVGGNGADTLDGGDGADTLFGNGLAD----TLFGG 217
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
D L+ ++ + L G D
Sbjct: 218 KGNDVLRGGTNNDLLNG---------------GSGNDDIQGNFGADTLFGGRGFDTLSGG 262
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ F ++G D + + G N G L
Sbjct: 263 EGFDYLAGNDGNDALYGNDGNDGLNGGGGNDSLFGGTGNDTLSGLSGDDLLDGMGGNDLL 322
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE------GRFVTFDSYLYLGSYDDLRN 497
A + L D G D + G F N
Sbjct: 323 NGNAGDDTLTGGGLDDILNGGAGDDVLDGGTQSDLLNGGGGNDNLFGHSGADTINAGPGN 382
Query: 498 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
S + G A+ ++ ++ + L G D
Sbjct: 383 DTLSGGEGPDQLAGNKGDDIISGGAGNDAIFGGPGNDTMMGDDGNDFLLSGTGAD 437
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/359 (10%), Positives = 89/359 (24%), Gaps = 4/359 (1%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
D + + ++ D G ++ + G
Sbjct: 135 GGDGPDLLRGGTGNDSLSGENGNDTLDGGAGNDSLEGNFGDDSLAGFGGEDTLVGGNGAD 194
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+G ++G + + + +++ G +
Sbjct: 195 TLDGGDGADTLFGNGLADTLFGGKGNDVLRGGTNNDLLNGGSGNDDIQGNFGADTLFGGR 254
Query: 196 GAPKGSLG-NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G S G Y D+ + D + +L GG N +
Sbjct: 255 GFDTLSGGEGFDYLAGNDGNDALYGNDGNDGLNGGGGNDSLFGGTGNDTLSGLSGDDLLD 314
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G N + + +++ G +D++ G + ++V + +D+ +G G D F S
Sbjct: 315 GMGGNDLLNGNAGDDTLTGGGLDDILNGGAGDDVLDGGTQSDLLNGGGGNDNLF--GHSG 372
Query: 315 LYKIYRFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQ 373
I + + + + + + L+
Sbjct: 373 ADTINAGPGNDTLSGGEGPDQLAGNKGDDIISGGAGNDAIFGGPGNDTMMGDDGNDFLLS 432
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D + + T + D + G+D +A G
Sbjct: 433 GTGADQIDGGAGNDVIRAYDFNFGTDVTGASDTLADTVMGGDGNDTISANDGDTVTGGA 491
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 80/284 (28%), Gaps = 19/284 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
D NG T + D+ G G I + + G
Sbjct: 197 DGGDGADTLFGNGLADTLFGGKGNDVLRGGTNNDLLNGGSGNDDIQGNFGADTLFGGRGF 256
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + G D + + + + G +S + +
Sbjct: 257 DTLSGGEGFDYLAGNDGNDALYGNDGNDGLNGGGGNDSLFGGTGNDTLSGLSGDDLLDGM 316
Query: 195 YGAP--KGSLGNNIYKI------------EVQQKDSPFIQTIYDSGGDDLL-----DLTL 235
G G+ G++ + + GG+D L T+
Sbjct: 317 GGNDLLNGNAGDDTLTGGGLDDILNGGAGDDVLDGGTQSDLLNGGGGNDNLFGHSGADTI 376
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G N E + G + + I+ +++ G GND ++G+ N+ +G
Sbjct: 377 NAGPGNDTLSGGEGPDQLAGNKGDDIISGGAGNDAIFGGPGNDTMMGDDGNDFLLSGTGA 436
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
D DG +G D Y ++ + + + D +S
Sbjct: 437 DQIDGGAGNDVIRAYDFNFGTDVTGASDTLADTVMGGDGNDTIS 480
>gi|12643423|sp|P53690|MMP14_MOUSE RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
Full=MMP-X1; AltName: Full=MT-MMP; AltName:
Full=Membrane-type matrix metalloproteinase 1;
Short=MT-MMP 1; Short=MTMMP1; AltName:
Full=Membrane-type-1 matrix metalloproteinase;
Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
Length = 582
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + +
Sbjct: 167 IREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMSPFYQWMDTEN 268
>gi|109896827|ref|YP_660082.1| peptidase M12A, astacin [Pseudoalteromonas atlantica T6c]
gi|109699108|gb|ABG39028.1| peptidase M12A, astacin [Pseudoalteromonas atlantica T6c]
Length = 353
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 41/128 (32%), Gaps = 5/128 (3%)
Query: 49 PNAQEVARWALGEWSKV-VDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKA 107
N + R A EW + + L F E + +F + +
Sbjct: 62 ANQLQAVREAFDEWKNLGIGLDFIEVGDSAQAEFRIGFAPGSSWSYVGRDCIDLVPNHED 121
Query: 108 DVWRYGIGKGT-ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF 166
+G T ALHEIGHA+G H + V+ + Y N +Y+
Sbjct: 122 QTMNFGWDLTTPYGRDTALHEIGHAMGFPHEHQNHKAGIVWDENAVYAN---FAGSPNYW 178
Query: 167 MPQDSMMD 174
+ +
Sbjct: 179 DDATTYHN 186
>gi|189069202|dbj|BAG35540.1| unnamed protein product [Homo sapiens]
Length = 582
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATYEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 167 IREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEN 268
>gi|167468166|ref|ZP_02332870.1| virulence determinant [Yersinia pestis FV-1]
Length = 2984
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 9/167 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL--TLIGGVKNYIDLNTESWSSI 253
G + G N + + + G+D + L L + + ID++ +S +
Sbjct: 2047 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 2106
Query: 254 GGY-EKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2107 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2164
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ H++ +E + + ++
Sbjct: 2165 GLAQ---GGTGLDSYHILKSTHEKSLQIRIEEVSENNNTDMQISNIF 2208
Score = 45.9 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 47/153 (30%), Gaps = 30/153 (19%)
Query: 274 SSGNDVVIGNSA----NNVFFESSGNDVFD-----------GSSGLDTFFYYAPSYLYKI 318
SSGND V+ SA N GND G G DT++Y A S I
Sbjct: 2511 SSGNDEVVITSATFLPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI 2570
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+Y LS ER + + V + + + D
Sbjct: 2571 ADTSGLDHLYLDKHILLHTLSA-ER-----RENNLVLNIADNT----SGRIIFVDWYLAD 2620
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ EF E ITFD L Y D
Sbjct: 2621 ENKV-----EFIWVEDSQITFDELFSLRPYSDE 2648
Score = 39.8 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 10/135 (7%)
Query: 274 SSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAIIVYDA 330
G+DV G + N+F SG + G DTF + S + + E V
Sbjct: 2026 GGGDDVAKGYHKKKNIFTIGSGFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALG 2085
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS-------YEDLIQVIGQDVFESM 383
+ S ++ ++ KQ ++L + + +I + M
Sbjct: 2086 EVLGNEIDSIIDISNGYYSQVNGGVEKQVALLYDFENILGHENVNDTIIGNDVDNYLNGM 2145
Query: 384 KHFYEFGLSEGRDIT 398
+ + G D+
Sbjct: 2146 GGDDKIWGNGGNDLL 2160
>gi|281183314|ref|NP_001162305.1| matrix metalloproteinase-26 [Papio anubis]
gi|160904139|gb|ABX52125.1| matrix metallopeptidase 26 (predicted) [Papio anubis]
Length = 261
Score = 62.5 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 60/190 (31%), Gaps = 51/190 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W+ Y + Y+ + ++ A+ WS V L F++ + +DIK
Sbjct: 99 WNKYTLTYRIINYPHDMKPSTV-------KDSIYNAVSIWSNVTPLIFQQVQNEDADIKI 151
Query: 82 IS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
G+ P S ++FDK + W G L A H
Sbjct: 152 SFWQWAHEDGWPFDGPGGILGHAFLPN--SGNPGVVHFDKNEHWSTS-NTGYNLFLVATH 208
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
EIGH+LGL H G+ S + Y P
Sbjct: 209 EIGHSLGLQHSGN---------------QSSIMYPTYWYHDPGT----------FQLSAD 243
Query: 187 DIVAVQKIYG 196
DI +Q +YG
Sbjct: 244 DIQRIQHLYG 253
>gi|255318886|ref|ZP_05360112.1| biofilm-associated protein [Acinetobacter radioresistens SK82]
gi|262378859|ref|ZP_06072016.1| hypothetical protein HMPREF0018_00803 [Acinetobacter radioresistens
SH164]
gi|255304142|gb|EET83333.1| biofilm-associated protein [Acinetobacter radioresistens SK82]
gi|262300144|gb|EEY88056.1| hypothetical protein HMPREF0018_00803 [Acinetobacter radioresistens
SH164]
Length = 1391
Score = 62.5 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 53/137 (38%), Gaps = 2/137 (1%)
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+ N+ + GY+ N T+ + + ++G +G+D + + N+ +GND G G
Sbjct: 1221 NSNSTVSQRLYGYDGNDTLNGGSGNDILLGGNGDDTLNAGAGNDYINGGAGNDTITGGPG 1280
Query: 304 LDTFFYY--APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
DT + + + + N + ++ +++ N+ Q
Sbjct: 1281 ADTVVFDLLVAANARGGNGTDTWTDFHVGNIRTDNQADRIDVSDLLGGEVNANNLGQYIQ 1340
Query: 362 LEYTASYEDLIQVIGQD 378
L Y ++ + I +D
Sbjct: 1341 LNYNSTSSTVTLSIDRD 1357
Score = 41.7 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 18/90 (20%)
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
L + + L+ G D + G D DL
Sbjct: 1229 RLYGYDGNDTLNGGSGNDILLGGNGDDTLNAGAGNDYINGGAGNDTITGGPGADTVVFDL 1288
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+ G + V R +
Sbjct: 1289 LVAANARGGNGTDTWTDFHVGNIRTDNQAD 1318
>gi|149020731|gb|EDL78536.1| rCG64123 [Rattus norvegicus]
Length = 418
Score = 62.5 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 50/151 (33%), Gaps = 25/151 (16%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNP-----NAQEVARWALGEWSKVVDLTFEET-SIH 76
+ Y I Y T L++ I P ++ A WS V LTFE
Sbjct: 49 VTPYSITYNNTQWTKTHLTYSILNYTPHLPRKVVEDAIERAFKVWSDVTPLTFERVFEEE 108
Query: 77 SDIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILS 121
DI S+ + P ++++D + W +
Sbjct: 109 GDIVLSFHQGDHGDLYSFNGSKSHFAHAFPP--GPGLGGDVHYDLDETWTNNSDNFNLFY 166
Query: 122 HNALHEIGHALGLMHP-GSYNGGYPVYGVDN 151
A HE+GH+LGL H +P Y +N
Sbjct: 167 VTA-HELGHSLGLSHSKDEEALMFPSYTWNN 196
>gi|126327112|ref|XP_001362711.1| PREDICTED: similar to matrix metalloproteinase-3 [Monodelphis
domestica]
Length = 478
Score = 62.5 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 65/211 (30%), Gaps = 50/211 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W N + Y+ T D+ AL WS V LTF S +DI
Sbjct: 108 WRNNEVTYRIVNYTPDMNEPDVD-------AAIERALKVWSDVTPLTFTRLSEGEADIMI 160
Query: 82 IS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ P + +++ D + W G L A H
Sbjct: 161 SFSVKDHGDFLPFDGPGGVLAHAYPP--GPKINGDVHLDDDEKWTEDT-TGINLFLTAAH 217
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E GH+LGL+H S T+ + Y + + F
Sbjct: 218 EFGHSLGLLH--------------------SSDTAALMYPVYNSNTDLTRFRLSQ----D 253
Query: 187 DIVAVQKIYGAPKGSLGNNIYKIEVQQKDSP 217
DI +Q +YG P S + + +++ P
Sbjct: 254 DIDGIQSLYGYPSDSPDDPVPPTTSTEQEKP 284
>gi|13591995|ref|NP_112318.1| matrix metalloproteinase-14 [Rattus norvegicus]
gi|146345458|sp|Q10739|MMP14_RAT RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
Full=Membrane-type matrix metalloproteinase 1;
Short=MT-MMP 1; Short=MTMMP1; AltName:
Full=Membrane-type-1 matrix metalloproteinase;
Short=MT-MMP; Short=MT1-MMP; Short=MT1MMP; Flags:
Precursor
gi|1001927|emb|CAA62897.1| membrane-type metalloproteinase [Rattus norvegicus]
gi|47939003|gb|AAH72509.1| Mmp14 protein [Rattus norvegicus]
gi|149063898|gb|EDM14168.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_a
[Rattus norvegicus]
gi|149063899|gb|EDM14169.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_a
[Rattus norvegicus]
Length = 582
Score = 62.5 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + +
Sbjct: 167 IREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 268
>gi|188528637|ref|NP_032634.3| matrix metalloproteinase-14 [Mus musculus]
gi|26353494|dbj|BAC40377.1| unnamed protein product [Mus musculus]
gi|74208110|dbj|BAE29158.1| unnamed protein product [Mus musculus]
gi|74211726|dbj|BAE29216.1| unnamed protein product [Mus musculus]
gi|74216086|dbj|BAE23719.1| unnamed protein product [Mus musculus]
gi|74228075|dbj|BAE38000.1| unnamed protein product [Mus musculus]
gi|78499513|gb|ABB45784.1| type 1 matrix metalloprotease 14 [Mus musculus]
gi|148704401|gb|EDL36348.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_a [Mus
musculus]
Length = 582
Score = 62.5 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + +
Sbjct: 167 IREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 268
>gi|74196330|dbj|BAE33060.1| unnamed protein product [Mus musculus]
Length = 582
Score = 62.5 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + +
Sbjct: 167 IREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 268
>gi|194212236|ref|XP_001491808.2| PREDICTED: similar to Matrix metalloproteinase-19 precursor
(MMP-19) (Matrix metalloproteinase RASI) (MMP-18) [Equus
caballus]
Length = 547
Score = 62.5 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 58/167 (34%), Gaps = 38/167 (22%)
Query: 50 NAQEVARWALGEWSKVVDLTFEET-SIHSDIKFIS-SNNGYVCTPRYDSRY--------- 98
A+E A WS V LTF+E + +DI+ C+ +D
Sbjct: 125 TAREALLQAFQYWSDVTPLTFQEVHAGWADIRLSFHGRQSLYCSKDFDGPGRVLAHADIP 184
Query: 99 -FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
++FD+ ++W +G L A HE+GHALGL H
Sbjct: 185 ELGSVHFDEDELWTERTYRGVNLRIIAAHELGHALGLGH--------------------- 223
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
Y + + A + D+ +Q +YG +G+
Sbjct: 224 -----SRYTQALMAPVYAGYRPHFKLHPDDVAGIQALYGKKSPGIGD 265
>gi|254422945|ref|ZP_05036663.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
gi|196190434|gb|EDX85398.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Synechococcus sp. PCC 7335]
Length = 654
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 36/116 (31%), Gaps = 5/116 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D+ + I G I + + G +D++ G++ +++ +
Sbjct: 510 DILRGDRNNRSVQNGATGDDIIYGGAGRDRIGGKGGNDKLYGDEDDDLIWGDNGDDLLWG 569
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
GND G G DTF +Y F V E L FA
Sbjct: 570 GRGNDGLYGGQGRDTFVLAPGEGTDSLYDFTQGQDV-----FGLTQALSFEALSFA 620
>gi|319761846|ref|YP_004125783.1| hemolysin-type calcium-binding region protein [Alicycliphilus
denitrificans BC]
gi|317116407|gb|ADU98895.1| Hemolysin-type calcium-binding region protein [Alicycliphilus
denitrificans BC]
Length = 1025
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/347 (13%), Positives = 81/347 (23%), Gaps = 43/347 (12%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ +Y GG D+++ + + ++ G N +
Sbjct: 437 GGNDTYTGTAGADIVYGMGGSDIINGDPASASSSDRVYGGDGNDTLYGLGGNDQLYGQQG 496
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ + G G+D++ G S N+ G D G +G D A S Y +
Sbjct: 497 DDKLYGGDGDDLLDGGSDNDTLDGGRGADTLIGGAGDDILGGAAGSVDAGYYNGYYGLGY 556
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRS--ILEYTASYEDLIQVIGQDVFESMKH 385
YD R + + + ++ L +V
Sbjct: 557 YDPGAGNT--------YRGGKGADTLNGTSRADRYLFDLGDGHDTLREVEVTGQPSGQVD 608
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
FG I S DL + + P +
Sbjct: 609 VLRFGPG----IAPADISIRRSTVDLVLAHVNGTDSVTVKSW------FTAPGSSANQVE 658
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
D + EG TF+ LY +D+
Sbjct: 659 RVEFADGTAWSHIDLTAWALVVTGTEQGERLEG-VGTFNDTLYGLGGNDILV-------- 709
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L+ A ++ L L +G D
Sbjct: 710 --------------GGAGNDILDGGADNDVLDGGVGADVLLGGSGDD 742
Score = 58.6 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 70/540 (12%), Positives = 128/540 (23%), Gaps = 144/540 (26%)
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP-KGSLGNN 205
Y D + + + D G +V + I G P S +
Sbjct: 413 YMAFTDQRLSAAEITARVGTVVLTGGNDTYTGTAGADIVYGMGGSDIINGDPASASSSDR 472
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+Y + T+Y GG+D L G + + + G N T+
Sbjct: 473 VYGGDGN-------DTLYGLGGNDQL----YGQQGDDKLYGGDGDDLLDGGSDNDTLDGG 521
Query: 266 TVIESVVGSSGNDVV--------------------IGNSANNVFFESSGNDVFDG----- 300
++++G +G+D++ A N + G D +G
Sbjct: 522 RGADTLIGGAGDDILGGAAGSVDAGYYNGYYGLGYYDPGAGNTYRGGKGADTLNGTSRAD 581
Query: 301 ------SSGLDTF----FYYAPSYLYKIYRFENA------------IIVYDANEHKQDFL 338
G DT PS + RF + + A+ + D +
Sbjct: 582 RYLFDLGDGHDTLREVEVTGQPSGQVDVLRFGPGIAPADISIRRSTVDLVLAHVNGTDSV 641
Query: 339 S-------------DVERLRFADQCI---------------------DSVNVKQRSILEY 364
+ VER+ FAD L
Sbjct: 642 TVKSWFTAPGSSANQVERVEFADGTAWSHIDLTAWALVVTGTEQGERLEGVGTFNDTLYG 701
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL------------------- 405
+ L+ G D+ + G D+
Sbjct: 702 LGGNDILVGGAGNDILDGGADNDVLDGGVGADVLLGGSGDDVLGGALGSEDSGRVVHGTF 761
Query: 406 ---GSYDDLRNVFGSDR--GAAARHYITHGVKEGRNPDA--------------------- 439
G+ + G+D G A + EG++
Sbjct: 762 QSPGAGNVYEGGTGNDTLRGTALADTYHFNLGEGQDSLTEVEMAGQPAGQVDVLKFGPGI 821
Query: 440 -FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEG----RFVTFDSYLYLGSYDD 494
++ + DL+ A + D V + + RF ++ +
Sbjct: 822 APGDIQVLRQGSDLVLAHVNGADRFTVKSWYTTQGSTANQLEQVRFADGTAWSADELTER 881
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
V G+ G + L + L + G D +
Sbjct: 882 GLVVQGTSTGETLTGLTAY-ANTLLGEGGNDVLNGGTLSDQLWGGLGNDHLYGGQGSDFY 940
>gi|805013|emb|CAA58521.1| MT-MMP [Rattus norvegicus]
Length = 582
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + +
Sbjct: 167 IREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSNDPSDIMAPFYQWMDTEN 268
>gi|327279309|ref|XP_003224399.1| PREDICTED: matrix metalloproteinase-23-like [Anolis carolinensis]
Length = 612
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 55/204 (26%), Gaps = 62/204 (30%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEETSIHSD 78
W + + YK + LN E A WS V L+F +
Sbjct: 262 GYKWDHVNLTYKIVQFP--------STLNKGDTERAIASAFRMWSDVSPLSFRRLAPTQQ 313
Query: 79 IKFISSNNGYVCT--------PRYDSRYF----------MEINFDKADVWRYGIGK---- 116
+ T P +D EI+FD + W +G +
Sbjct: 314 ADITIGFYTFNHTDCWFSPLHPCFDGLNGELAHAFLPPRGEIHFDNHEFWIFGRSRFSWK 373
Query: 117 ----GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
L A HEIGHALGL H Y
Sbjct: 374 QGVWLNDLVQVAAHEIGHALGLWHSRDVRALMHPNAT---------------YSRTWQIG 418
Query: 173 MDASFGYCATPMVSDIVAVQKIYG 196
D DI A+Q++YG
Sbjct: 419 QD------------DIWAIQRLYG 430
>gi|145597875|ref|YP_001161951.1| virulence determinant [Yersinia pestis Pestoides F]
gi|145209571|gb|ABP38978.1| virulence determinant [Yersinia pestis Pestoides F]
Length = 3110
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 9/167 (5%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL--TLIGGVKNYIDLNTESWSSI 253
G + G N + + + G+D + L L + + ID++ +S +
Sbjct: 2173 GFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALGEVLGNEIDSIIDISNGYYSQV 2232
Query: 254 GGY-EKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2233 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2290
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
+ HK+ +E + + ++
Sbjct: 2291 GLAQ---GGTGLDSYHILKSTHKKSLQIRIEEVSENNNTDMQISNIF 2334
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 47/153 (30%), Gaps = 30/153 (19%)
Query: 274 SSGNDVVIGNSA----NNVFFESSGNDVFD-----------GSSGLDTFFYYAPSYLYKI 318
SSGND V+ SA N GND G G DT++Y A S I
Sbjct: 2637 SSGNDEVVITSATFLPGNYIDTGDGNDAIIYIRGHEGTMLKGGGGDDTYYYSAGSGAINI 2696
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+Y LS ER + + V + + + D
Sbjct: 2697 ADTSGLDHLYLDKHILLHTLSA-ER-----RENNLVLNIADNT----SGRIIFVDWYLAD 2746
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ EF E ITFD L Y D
Sbjct: 2747 ENKV-----EFIWVEDSQITFDELFSLRPYSDE 2774
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 10/135 (7%)
Query: 274 SSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAP--SYLYKIYRFENAIIVYDA 330
G+DV G + N+F SG + G DTF + S + + E V
Sbjct: 2152 GGGDDVAKGYHKKKNIFTIGSGFKQYQGGENADTFILTSAVASKSHILSGGEGNDTVALG 2211
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS-------YEDLIQVIGQDVFESM 383
+ S ++ ++ KQ ++L + + +I + M
Sbjct: 2212 EVLGNEIDSIIDISNGYYSQVNGGVEKQVALLYDFENILGHENVNDTIIGNDVDNYLNGM 2271
Query: 384 KHFYEFGLSEGRDIT 398
+ + G D+
Sbjct: 2272 GGDDKIWGNGGNDLL 2286
>gi|57529313|ref|NP_001006278.1| matrilysin [Gallus gallus]
gi|53126797|emb|CAG30985.1| hypothetical protein RCJMB04_1g18 [Gallus gallus]
Length = 263
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 57/197 (28%), Gaps = 51/197 (25%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKF 81
W+ ++ YK T + + R AL WS V L F+ +
Sbjct: 102 RWNKKYLTYKIVNYTPDLPREYVD-------DAIRRALMVWSNVTPLRFKRVTSGQADIM 154
Query: 82 I----------------SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
I + P + +FD + W +G L A
Sbjct: 155 IKFARRAHGDGYPFDGRGGTLAHAFQP--GEGLGGDAHFDDDERWSK-YNQGVNLFLVAA 211
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GH+LGL H + + + SY P+ T
Sbjct: 212 HEFGHSLGLAHSN---------------VRGALMYPLYSYVNPET----------FTLHW 246
Query: 186 SDIVAVQKIYGAPKGSL 202
D +QK+YG +
Sbjct: 247 DDRRGIQKLYGRNSANS 263
>gi|74201105|dbj|BAE37413.1| unnamed protein product [Mus musculus]
Length = 582
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + +
Sbjct: 167 IREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 268
>gi|113476371|ref|YP_722432.1| glycerophosphoryl diester phosphodiesterase [Trichodesmium erythraeum
IMS101]
gi|110167419|gb|ABG51959.1| glycerophosphoryl diester phosphodiesterase [Trichodesmium erythraeum
IMS101]
Length = 1372
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 40/113 (35%), Gaps = 2/113 (1%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+I G T+A + ++GS GND+++G N+ GND G G D
Sbjct: 1172 GDDTIIGLNGADTLAGRIGNDQIIGSRGNDLLLGQDGNDELQGRQGNDHLLGGDGDDQL- 1230
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+I + + + E + ID++N Q +
Sbjct: 1231 -NGGQGRDRINGGPGDDTLTGGASIDRFIFNSNEEFESDNFGIDTINNFQLDL 1282
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 39/125 (31%), Gaps = 8/125 (6%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGS 274
TI G D L G I + G + N + + ++G
Sbjct: 1169 GGVGDDTIIGLNGADTL--AGRIGNDQIIGSR--GNDLLLGQDGNDELQGRQGNDHLLGG 1224
Query: 275 SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP----SYLYKIYRFENAIIVYDA 330
G+D + G + G+D G + +D F + + S + I N +
Sbjct: 1225 DGDDQLNGGQGRDRINGGPGDDTLTGGASIDRFIFNSNEEFESDNFGIDTINNFQLDLRT 1284
Query: 331 NEHKQ 335
NE
Sbjct: 1285 NEDGN 1289
>gi|182682036|ref|YP_001830196.1| hemolysin-type calcium binding domain-containing protein [Xylella
fastidiosa M23]
gi|182632146|gb|ACB92922.1| Haemolysin-type calcium binding domain protein [Xylella fastidiosa
M23]
Length = 2107
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 62/197 (31%), Gaps = 15/197 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + I+ I + G + L T ++ G++ + +
Sbjct: 1353 NGYRNGNNDIEQIVFADG--TIWTPETLSSMGLTTLGTLGNDTLNGWQGKDILLGGDGDD 1410
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---------FYYAPSYLYKIYR 320
++ GS GND+++G + ++V +G++ +G +G D S +Y
Sbjct: 1411 TLYGSGGNDLLLGGAGDDVLDGGTGSNRLEGGAGNDVLKVSYWSADNVLNGGSGDDLLYG 1470
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVIGQDV 379
A D + +E+ D+ + + + + L G D
Sbjct: 1471 SAYADTYLFNKGDGHDTI--IEQ-SGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHDS 1527
Query: 380 FESMKHFYEFGLSEGRD 396
G G +
Sbjct: 1528 IRLKDWLDSNGYRNGNN 1544
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 70/463 (15%), Positives = 120/463 (25%), Gaps = 84/463 (18%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LMHPGSYNGGYPVYGVDNDY 153
+ D+ G G T+ + G L N G D
Sbjct: 1040 GNDTLNGWQGKDILLGGDGDDTLYGSGGNDLLLGGAGDDVLDGGTGSNRLEGGAGNDVLK 1099
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA-VQKIYGAPKGSLGNNIYKIEVQ 212
+ +V++ D + +++ D + + G K G I +V+
Sbjct: 1100 VSYWSADNVLNGGSGDDLLYGSAYADTYLFNKGDGHDTIIEQSGDDKLVFGEGIAAADVR 1159
Query: 213 QKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYID---------LNTESWSSIG--- 254
+ G D + D N I+ E+ SS+G
Sbjct: 1160 LLRQGQDVVLDLGNGHDSIRLKDWLDSNGYRNGNNDIEQIVFADGTIWTPETLSSMGLTT 1219
Query: 255 -GYEKNMTIAQ------------------HTVIESVVGSSGNDVVIGN--SANNVFFESS 293
G N T+ + G +GNDV+ + SA+NV S
Sbjct: 1220 LGTLGNDTLNGWQGKDILLGGDGDDVLDGGMGSNRLEGGAGNDVLKVSYWSADNVLNGGS 1279
Query: 294 GNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN--------------------EH 333
G+D+ GS+ DT+ + I + +
Sbjct: 1280 GDDLLYGSAYADTYLFNKGDGHDTIIEQSGDDKLVFGEGIAAADVRLLHQGQDVVLDLGN 1339
Query: 334 KQDFL---------------SDVERLRFADQCI--DSVNVKQRSILEYTASYEDLIQVIG 376
D + +D+E++ FAD I T + L G
Sbjct: 1340 GHDSIRLKDWLDSNGYRNGNNDIEQIVFADGTIWTPETLSSMGLTTLGTLGNDTLNGWQG 1399
Query: 377 QDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
+D+ S G D+ D L G+ + + ++ V
Sbjct: 1400 KDILLGGDGDDTLYGSGGNDLLLGGAGDDVLDGGTGSNRLEGGAGNDVLKVSYWSADNVL 1459
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
G + D A + Q G D
Sbjct: 1460 NGGSGDDLLYGSAYADTYLFNKGDGHDTIIEQSGDDKLVFGEG 1502
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 63/401 (15%), Positives = 121/401 (30%), Gaps = 51/401 (12%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG--TILSHNALHEIGHAL 132
+ S S + AD + + G G TI+ + ++
Sbjct: 1608 GAGNDVLKVSYWSADNVLNGGSGDDLLYGSAYADTYLFNKGDGHDTIIEQSGDDKLVFGE 1667
Query: 133 GL----------MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
G+ + G + DS + + Q D + T
Sbjct: 1668 GIAAADVRLLRQGQDVVLDLGNGHDSIRLKDWLDSNGYRNGNNDIEQIVFADGTIWTPET 1727
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
+ + + G ++ + T+Y SGG+DLL L G +
Sbjct: 1728 LSSMGLTTLGTL--GNDTLNG---WQGKDILLGGDGDDTLYGSGGNDLL---LGGAGDDV 1779
Query: 243 IDLNTESWSSIGGYEKN-MTIAQHTVIESVVGSSGNDVVIGNSANNV--FFESSGNDVFD 299
+D T S GG + + ++ + + G SG+D++ G++ + F + G+D
Sbjct: 1780 LDGGTGSNRLEGGAGNDVLKVSYWSADNVLNGGSGDDLLYGSAYADTYLFNKGDGHDTII 1839
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---------------SDVERL 344
SG D + + V + D + +D+E++
Sbjct: 1840 EQSGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHDSIRLKDWLDSNGYRNGNNDIEQI 1899
Query: 345 RFADQCI-----------DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
FAD I ++ L + L+ G DV +
Sbjct: 1900 VFADGTIWTPETLSSMGLTTLGTLGNDTLNGWQGKDILLGGDGDDVLDGGTGSNRLEGGA 1959
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D+ Y + + L G D + + T+ +G
Sbjct: 1960 GNDVLK--VSYWSADNVLNGGSGDDTLYGSAYADTYLFNKG 1998
Score = 55.2 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/283 (12%), Positives = 80/283 (28%), Gaps = 19/283 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ Q + D+ G L+ G + + + G + ++ +
Sbjct: 818 DRTAVTPDGRQALADA-GIPLIAGNAEGSDATDLLFGDAGANLLRGGGGDDLLSGGDGDD 876
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF---------FYYAPSYLYKIYR 320
++ G +GND + G++ N+V +G++ +G +G D S +Y
Sbjct: 877 TLEGGAGNDTLSGDAGNDVLDGGTGSNRLEGGAGNDVLKVSYWSADNVLNGGSGDDLLYG 936
Query: 321 FENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE-DLIQVIGQDV 379
A D + +E+ D+ + + + + L G D
Sbjct: 937 SAYADTYLFNKGDGHDTI--IEQ-SGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHDS 993
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSY--DDLRNVFGSDRGAAARHYITHGVKE---G 434
G G + G+ + + G + +G +
Sbjct: 994 IRLKDWLDSNGYRNGNNDIEQIVFADGTIWTPETLSSMGLTTLGTLGNDTLNGWQGKDIL 1053
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D L ++ L+ D G + +
Sbjct: 1054 LGGDGDDTLYGSGGNDLLLGGAGDDVLDGGTGSNRLEGGAGND 1096
Score = 46.3 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 49/343 (14%), Positives = 86/343 (25%), Gaps = 53/343 (15%)
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ D+ G G T+ + LG +GG ++ ND
Sbjct: 1740 GNDTLNGWQGKDILLGGDGDDTLYGSGGNDLL---LGGAGDDVLDGGTGSNRLEGGAGND 1796
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
+SY+ + + S +YG+ + Y
Sbjct: 1797 VLK---VSYWSADNVLNGGSGD-------------DLLYGSAYA----DTYLFN----KG 1832
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI------------AQ 264
TI + GDD L + L + + +I
Sbjct: 1833 DGHDTIIEQSGDDKLVFGEGIAAADVRLLRQGQDVVLDLGNGHDSIRLKDWLDSNGYRNG 1892
Query: 265 HTVIESVVGSSGNDVV--IGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ IE +V + G +S + GND +G G D +
Sbjct: 1893 NNDIEQIVFADGTIWTPETLSSMGLTTLGTLGNDTLNGWQGKDILLGGDGDDVLDGGTGS 1952
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED--LIQVIGQDVF 380
N + D L + + L +A + + G D
Sbjct: 1953 NRLE----GGAGNDVLK----VSYWSADNVLNGGSGDDTLYGSAYADTYLFNKGDGHDTI 2004
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ EG + + + S DDL +F
Sbjct: 2005 IEQSGDDKLVFGEG--LHREEACFTRSGDDLSILFNGSEDQVT 2045
Score = 38.6 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 38/303 (12%), Positives = 71/303 (23%), Gaps = 67/303 (22%)
Query: 270 SVVGSSGNDVVIGNSANN------------------VFFESSGNDVFDGSSGLDTFFYYA 311
+ GS D++ G++ N +GND G +G D
Sbjct: 841 NAEGSDATDLLFGDAGANLLRGGGGDDLLSGGDGDDTLEGGAGNDTLSGDAGND--VLDG 898
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED- 370
+ ++ ++ ++ + +L +A +
Sbjct: 899 GTGSNRLEGGAGNDVL---------------KVSYWSADNVLNGGSGDDLLYGSAYADTY 943
Query: 371 -LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 429
+ G D + EG + + D G D +
Sbjct: 944 LFNKGDGHDTIIEQSGDDKLVFGEG----------IAAADVRLLRQGQDVVLDLG----N 989
Query: 430 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
G R D + Y + D+ + + S+ G + D+
Sbjct: 990 GHDSIRLKDWLDSNGYRNGNNDIEQIVFADGTIWTP--ETLSSMGLTTLGTLGNDTLNGW 1047
Query: 490 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQA 549
D L G D + L A + L A
Sbjct: 1048 QGKDILLGGDGDDTLYGS--------------GGNDLLLGGAGDDVLDGGTGSNRLEGGA 1093
Query: 550 GKD 552
G D
Sbjct: 1094 GND 1096
>gi|461769|sp|P28862|MMP3_MOUSE RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=EMS-2;
AltName: Full=Matrix metalloproteinase-3; Short=MMP-3;
AltName: Full=Transin-1; Flags: Precursor
gi|296168|emb|CAA47029.1| stromelysin-i [Mus musculus]
Length = 477
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 61/199 (30%), Gaps = 49/199 (24%)
Query: 25 NYFIRY-KPDVLTTHRLSFDITELNP-----NAQEVARWALGEWSKVVDLTFEETSIH-S 77
F + +++ I P + AL W +V LTF S +
Sbjct: 98 GGFSTFPGSPKWRKSHITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSRISEGEA 157
Query: 78 DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + + P + +FD + W + GT L
Sbjct: 158 DIMISFAVGEHGDFVPFDGPGTVLAHAYAP--GPGINGDAHFDDDERWTEDV-TGTNLFL 214
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE+GH+LGL H S + Y + + S + F
Sbjct: 215 VAAHELGHSLGLYH--------------------SAKAEALMYPVYKSSTDLSRFHLSQ- 253
Query: 183 PMVSDIVAVQKIYGAPKGS 201
D+ +Q +YG P S
Sbjct: 254 ---DDVDGIQSLYGTPTAS 269
>gi|312384573|gb|EFR29270.1| hypothetical protein AND_01925 [Anopheles darlingi]
Length = 1055
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 61/178 (34%), Gaps = 27/178 (15%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
+ W I Y ++ + + +A+ A GEWSK L F +DI
Sbjct: 78 ESWRKRRITYFIANWSSKVGEESVAKF------MAK-AFGEWSKYSKLRFVRVYDPSADI 130
Query: 80 KFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYG---IGKGTILS 121
+ + P + Y +I+FD+ + W+ +G+G
Sbjct: 131 IVGFGSGHHGDNYPFDGPGNILAHAFYPYEMNAYGGDIHFDEDENWKENSTHLGEGVDFY 190
Query: 122 HNALHEIGHALGLMHPGSYNG-GYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
A+HE+GH+LGL H Y+ +P Y D M + D
Sbjct: 191 SVAIHELGHSLGLAHSPVYSSLMFPYYKGITQGTLDYDDILAMYQLYSKWVGRDFLGN 248
>gi|75909834|ref|YP_324130.1| hemolysin-type calcium-binding protein [Anabaena variabilis ATCC
29413]
gi|75703559|gb|ABA23235.1| Hemolysin-type calcium-binding region [Anabaena variabilis ATCC
29413]
Length = 589
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 66/214 (30%), Gaps = 10/214 (4%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
GG ++ + + G + + + + G GND + G N+ GN
Sbjct: 14 YGGDESDTIKGFAGYDYLYGGLGDDYLYGGLDNDKLYGGLGNDKLYGGEGNDNLNGEEGN 73
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD-----VERLRFADQC 350
+ G +G DT + + E +Y + + L + +RF+
Sbjct: 74 NSLYGEAGDDTLDAGNSTGNNLLDGGEGNDEIYVYSSSGDNTLKGGAGNDILDVRFSYGK 133
Query: 351 IDSVNVKQRSILE--YTASYEDLIQVIGQDVFESM--KHFYEFGLSEGRDITFDSYLYLG 406
L Y+ L G D +G DI SY + G
Sbjct: 134 NILDGGSGNDQLYARYSQGNNSLRGGSGDDYLGVDLSAGNNILDGGDGNDILDISYQWKG 193
Query: 407 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
+ G+D A ++ + G D+F
Sbjct: 194 KNI-VSGGNGNDIFYAYGVQGSNTLNGGSGNDSF 226
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 72/580 (12%), Positives = 149/580 (25%), Gaps = 36/580 (6%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
F D G+G + ++ LG G
Sbjct: 6 GTNSNDYLYGGDESDTIKGFAGYDYLYGGLGDDYLYGGLDNDKLYGGLGNDKLYGGEGND 65
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+ G + + + D+ +D + V G G
Sbjct: 66 NLNGEEGNNSL-----YGEAGDDTLDAGNSTGNNLLDGGEGNDEIYVYSSSGDNTLKGGA 120
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
++V+ I + G+D L G + + + + + N +
Sbjct: 121 GNDILDVRFSYGKNI--LDGGSGNDQLYARYSQGNNSLRGGSGDDYLGVDLSAGNNILDG 178
Query: 265 HTVIESVVGS---SGNDVVIGNSANNVF--FESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ + S G ++V G + N++F + G++ +G SG D+F+ +P ++
Sbjct: 179 GDGNDILDISYQWKGKNIVSGGNGNDIFYAYGVQGSNTLNGGSGNDSFYISSPDANTVVH 238
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
D+L + ++ + + + + +
Sbjct: 239 PLA---TQTVDGGTGYDYL----CIDYSSAIAGITSSFNTTTKQGLITADTNQIRYKNIE 291
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ + G + G D L G+D + + + G +
Sbjct: 292 QLKIIGTAYDDIIVGGNSDDIIDGGSGGNDTLNGGAGNDILSIRGNSRNNNTVYGGAGND 351
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
A L + +F N D+ GSY +
Sbjct: 352 SLYANDTAGTNLLDGGDGNDYLSATNNYSYFFNASQTLIGGAGDDTLDVSGSYGNNFLYG 411
Query: 500 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED----------LINAFADAPDLVQA 549
G+ + Y D +Y+++ L + V +
Sbjct: 412 GAGNDSLYADYSVGPH----TLDGGDGDDYLSAKGSSSRFIINTHILDGGAGNDILDVGS 467
Query: 550 GKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM-KEGRALGIS 608
+ G + L ++ G DR H + G G+S
Sbjct: 468 ARAKNKLIGGGGNDILI--GGLNEDTFVFKNYNEGIDRIYNFDHLDRIQICAVGFGGGLS 525
Query: 609 GMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
+ D +D LY D G+G+
Sbjct: 526 PDSLSAGQFTLGTVATTNDQRFIYDTSNGALYFDQDGNGS 565
>gi|329851466|ref|ZP_08266223.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328840312|gb|EGF89884.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 638
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/427 (11%), Positives = 113/427 (26%), Gaps = 27/427 (6%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
++ ++ NG+ +S + +D+ G+G T+
Sbjct: 103 VTLTGAAHINATGNGFNNLLTGNSGNNLLDGGAGSDILTGGLGDDTMTG----------- 151
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G + + V + +S + M S++ + +++
Sbjct: 152 -----GDGDDIFYVDSAGDLVFENSGEGADMVVSSVSYSLLGTGLEHLTLSGAANLSGK- 205
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ + T+ GDD G + S
Sbjct: 206 ----GNQRANVLTGNSGNNALDGDAGNDTLTGGAGDDTY-YINSKGDVVVENHYEGHDSI 260
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ ++ V + + +G+ GNS N +SGN+V DGS+G DT
Sbjct: 261 VSSVS--YSLFGRAVEDLSLTGAGHLTAKGNSLANALTGNSGNNVLDGSTGKDTMSGGLG 318
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ Y + + + + + + L + + L+
Sbjct: 319 NDTYYVNSSYDLVNEASGQGFDRVYSNATFSLAGQFAEALFLTGTGNTDATGNTLGNLLV 378
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G + + M +G D + + R + G++
Sbjct: 379 GNSGNNELDGMGGADTLQGGDGDDTYYLGLDKNDVVIEAVGGGNDTIHTGLRSFTLVGLE 438
Query: 433 EGRNPDAFKALEYIASHED--LINAFADAPDLVQVGKDHFSNFGCEEGRFVTF-DSYLYL 489
+ E + D + + G D + D Y+
Sbjct: 439 VENLRMRGDSREGFGNDLDNWITGNGYNNFMYGGAGNDTLDGGAAHDVMTGGTGDDVYYV 498
Query: 490 GSYDDLR 496
S +D+
Sbjct: 499 ESLNDVV 505
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 46/326 (14%), Positives = 77/326 (23%), Gaps = 51/326 (15%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY--------------- 316
G+ ND G + N+ G+DV G GLDT F
Sbjct: 5 NGTPDNDTYTGGAGNDGITGVGGDDVLSGGDGLDTLFGGDGHDWIDGGDGDDIMGGGLGD 64
Query: 317 -KIYRFENAIIVYDANEHKQDFLSD----------VERLRFADQC-IDSVNVKQRSILEY 364
V + D + +E + I++ ++L
Sbjct: 65 DTFVVDSAGDTVLEGTNQGIDLVRASVSFSLAGRQIEFVTLTGAAHINATGNGFNNLLTG 124
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ L G D+ +G DI + G + G+D ++
Sbjct: 125 NSGNNLLDGGAGSDILTGGLGDDTMTGGDGDDIFYVDSA--GDLVFENSGEGADMVVSSV 182
Query: 425 HYITHG------------VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSN 472
Y G G+ L + + L + G D +
Sbjct: 183 SYSLLGTGLEHLTLSGAANLSGKGNQRANVLTGNSGNNALDGDAGNDTLTGGAGDDTYYI 242
Query: 473 FGCE----EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
E + DS + SY A H G
Sbjct: 243 NSKGDVVVENHYEGHDSIVSSVSYSLFGRAVEDLSLTGAGHLTAKGNSLANALTGN---- 298
Query: 529 YIASHEDLINAFADAPDLVQAGKDHF 554
+ + L + G D +
Sbjct: 299 --SGNNVLDGSTGKDTMSGGLGNDTY 322
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 44/369 (11%), Positives = 98/369 (26%), Gaps = 76/369 (20%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E+ S+ + N +S + D G+G T +++ +
Sbjct: 274 EDLSLTGAGHLTAKGNSLANALTGNSGNNVLDGSTGKDTMSGGLGNDTYYVNSSYDLVNE 333
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
A G + + + FLT + +++ + G + +
Sbjct: 334 ASGQG--FDRVYSNATFSLAGQFAEALFLTGTGNTDATGNTLGNLLVGNSGNNELDGMGG 391
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL----------------- 233
+ G G++ Y + + + D GG+D +
Sbjct: 392 ADTLQGGD----GDDTYYLGLDKNDVVIEAV---GGGNDTIHTGLRSFTLVGLEVENLRM 444
Query: 234 -----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDV--------- 279
G + + + G N T+ + + G +G+DV
Sbjct: 445 RGDSREGFGNDLDNWITGNGYNNFMYGGAGNDTLDGGAAHDVMTGGTGDDVYYVESLNDV 504
Query: 280 ------------------------------------VIGNSANNVFFESSGNDVFDGSSG 303
GN +N ++GN+V G+ G
Sbjct: 505 VVEDADSGIDWVMGGNSHPLFANVENLTLLNDNAVNATGNGLDNRLEGNTGNNVLTGAGG 564
Query: 304 LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE 363
D F + S +I A +++ + + ++L
Sbjct: 565 ADLFVFLQDSGADRIADLNGAEGDRINISAYTGGVANPAMISQVGADVLIHLGDGNTVLI 624
Query: 364 YTASYEDLI 372
T + +++
Sbjct: 625 LTDTVDNVA 633
>gi|304320596|ref|YP_003854239.1| hypothetical protein PB2503_05112 [Parvularcula bermudensis
HTCC2503]
gi|303299498|gb|ADM09097.1| hypothetical protein PB2503_05112 [Parvularcula bermudensis
HTCC2503]
Length = 315
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 60/259 (23%), Gaps = 3/259 (1%)
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
G G + T+ +++ G ND + G ++ S N
Sbjct: 16 YGRTGADEIFTNAGDDGAFGGRGDDTVYGDAGDDNLFGGKNNDTIFGGDGDDFIQAGSKN 75
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDSV 354
D+ G G D F A +Y + + + F + + +
Sbjct: 76 DLIYGFDGNDRIF--AGLGNDIVYGSDGDDEISGGWGDDEIFSGEGNDISAGNLGNDRLF 133
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
L A + L D E G D+ Y D N
Sbjct: 134 GGLGDDQLFGNAGADYLNGGADNDSLFGGSGDDEVYGDAGNDLIEGGSGNDSLYGDKGND 193
Query: 415 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFG 474
G E L A + L + +
Sbjct: 194 VVIGGAGDDFVAGGLGDDELFGDGGSDFLFAGAGIDFLTGGAGADTFFFDAEFNSVAGNT 253
Query: 475 CEEGRFVTFDSYLYLGSYD 493
F + +Y+G+
Sbjct: 254 DTITDFGNGNDTIYIGNGG 272
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 67/263 (25%), Gaps = 8/263 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
D F D D T+ G + ++ +I G + + I +
Sbjct: 16 YGRTGADEIFTNAGDDGAFGGRGDDTVYGDAGDDNLFGGKNNDTIFGGDGDDFIQAGSKN 75
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK-----IYRFEN 323
+ + G GND + N++ + S G+D G G D F + + F
Sbjct: 76 DLIYGFDGNDRIFAGLGNDIVYGSDGDDEISGGWGDDEIFSGEGNDISAGNLGNDRLFGG 135
Query: 324 AIIVYDANEHKQDFLSD---VERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
D+L+ + L + ++E + + L G DV
Sbjct: 136 LGDDQLFGNAGADYLNGGADNDSLFGGSGDDEVYGDAGNDLIEGGSGNDSLYGDKGNDVV 195
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 440
G D F + F + A +
Sbjct: 196 IGGAGDDFVAGGLGDDELFGDGGSDFLFAGAGIDFLTGGAGADTFFFDAEFNSVAGNTDT 255
Query: 441 KALEYIASHEDLINAFADAPDLV 463
+ I AP
Sbjct: 256 ITDFGNGNDTIYIGNGGVAPVPT 278
Score = 48.6 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 40/236 (16%), Positives = 72/236 (30%), Gaps = 9/236 (3%)
Query: 87 GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV 146
++ D G + I G + + +
Sbjct: 19 TGADEIFTNAGDDGAFGGRGDDTVYGDAGDDNLFGGKNNDTIFGGDGDDFIQAGSKNDLI 78
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV--SDIVAVQKIYGAPKGSLGN 204
YG D + + L + + Y D + +G +DI A G LG+
Sbjct: 79 YGFDGNDRIFAGLGNDIVYGSDGDDEISGGWGDDEIFSGEGNDISAGNLGNDRLFGGLGD 138
Query: 205 NIYKIE---VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ +++ GDD + G N + S+ G + N
Sbjct: 139 DQLFGNAGADYLNGGADNDSLFGGSGDD----EVYGDAGNDLIEGGSGNDSLYGDKGNDV 194
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK 317
+ + V G G+D + G+ ++ F +G D G +G DTFF+ A
Sbjct: 195 VIGGAGDDFVAGGLGDDELFGDGGSDFLFAGAGIDFLTGGAGADTFFFDAEFNSVA 250
Score = 40.2 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 38/324 (11%), Positives = 82/324 (25%), Gaps = 61/324 (18%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G++ + + G + + F ++G+D G G DT + + ++ +N ++
Sbjct: 4 DVLNGTTDRERLYGRTGADEIFTNAGDDGAFGGRGDDTVY--GDAGDDNLFGGKNNDTIF 61
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D + ++ + + +G D+ E
Sbjct: 62 GG-----------------DGDDFIQAGSKNDLIYGFDGNDRIFAGLGNDIVYGSDGDDE 104
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
G D F G +D+ + + G + L A
Sbjct: 105 ISGGWGDDEIFS-----GEGNDISAGNLGNDRL----FGGLGDDQLFGNAGADYLNGGAD 155
Query: 449 HEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
++ L D G D + + + + +G D G
Sbjct: 156 NDSLFGGSGDDEVYGDAGNDLIEGGSGNDSLYGDKGNDVVIGGAGDDFVAGGLGD----- 210
Query: 509 HYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFN 568
++L AG D G + F+
Sbjct: 211 -------------------------DELFGDGGSDFLFAGAGID--FLTGGAGADTFFFD 243
Query: 569 PDLY-LTSYDDLWNVFGSDRSAAA 591
+ + D FG+
Sbjct: 244 AEFNSVAGNTDTITDFGNGNDTIY 267
>gi|300722020|ref|YP_003711300.1| putative proprotein convertase 2 [Xenorhabdus nematophila ATCC
19061]
gi|297628517|emb|CBJ89084.1| putative Proprotein convertase 2 [Xenorhabdus nematophila ATCC
19061]
Length = 1751
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/160 (13%), Positives = 49/160 (30%), Gaps = 8/160 (5%)
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ ++ G SGND +I + +G++ + G +G D F A I+
Sbjct: 133 GVNNLYGGSGNDTLIAAKTGSWLVGGAGSNTYVGGTGDDVFVISASDDTKNIHGNGGHDT 192
Query: 327 VYDANEHKQDFL---SDVERLRFADQCIDSVNVKQRSIL-EYTASYEDLIQVIGQDVFES 382
+ + + + + + + + + L+ +G DV
Sbjct: 193 AIIVGKKGVELNMAQAGLTMAQGGSGSDVIRSGGANGVFIKGGSGDSVLVGGMGNDVLVG 252
Query: 383 MKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSD 418
G+ + + +Y + + G D
Sbjct: 253 GCGHNTIIGGSGKSVIYAGPQGDIIYASEGGSIIHAGGGD 292
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 81/280 (28%), Gaps = 36/280 (12%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
S + + ++ V S I G G T +
Sbjct: 118 ASQSETGETLDADQLGVNNLYGGSGNDTLIAAKTGSWLVGGAGSNTYVGGTGDDV----- 172
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
+ + + +D+ + G + + Q
Sbjct: 173 -----FVISASDDTKNIHGNGGHDTAII-------------VGKKGVELNMAQAGLTMAQ 214
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
G+ G V K + G+D+L + G N I +
Sbjct: 215 GGSGSDVIRSGG---ANGVFIKGGSGDSVLVGGMGNDVL---VGGCGHNTIIGGSGKSVI 268
Query: 253 IGGYEKNMTIA--QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
G + ++ A ++I G+D + G ++V GN DG G++ +
Sbjct: 269 YAGPQGDIIYASEGGSIIH---AGGGDDKIFGGFGDDVIEVGHGNATIDGDGGVNIVSLH 325
Query: 311 APSYLYKIYRFENAIIVYDA--NEHKQDFLSDVERLRFAD 348
Y+I R ++ +V D L ++++L FAD
Sbjct: 326 GNHDDYRITRTDDGYVVADKVVGRDGTVTLKNIQKLNFAD 365
Score = 54.4 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 19/198 (9%)
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G+ G+ + G G + S + D+S G T +
Sbjct: 914 GMPGAGATDLGSSQSGTFKYSFMSTHDFGERSAGNWTLQVTDSSSGLPVTLNAWSL---- 969
Query: 193 KIYGAPKGSLGNNIYKIEV----QQKDSPFIQTIYDS-----GGDDLLDLTLIGGVKNYI 243
++YG+ ++ Y + D+ GG + L+ + +
Sbjct: 970 RLYGSKST--PDDTYFYTDEYIQSVVGQANRAVLDDAVNGVAGGRNTLNAAAVSRDTA-V 1026
Query: 244 DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSG 303
+L T S G + I + I++++ GND ++ +A+ + GN+ G +G
Sbjct: 1027 NLLTGVASIGGAA---LAIKDPSGIQNIITGDGNDTLVAGNADALLDGGRGNNTLTGGTG 1083
Query: 304 LDTFFYYAPSYLYKIYRF 321
D F + +
Sbjct: 1084 KDFFVIHRREAGSDVINN 1101
Score = 45.9 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 69/230 (30%), Gaps = 21/230 (9%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM-TIAQHT 266
E D + +Y G+D L G S + +GG ++ I+
Sbjct: 123 TGETLDADQLGVNNLYGGSGNDTLIAAKTGSWLV---GGAGSNTYVGGTGDDVFVISASD 179
Query: 267 VIESVVGSSGNDVVI-----------GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+++ G+ G+D I + + SG+DV G + F S
Sbjct: 180 DTKNIHGNGGHDTAIIVGKKGVELNMAQAGLTMAQGGSGSDVIRSG-GANGVFIKGGSGD 238
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQV 374
+ ++ H + + +A D + SI+ + +
Sbjct: 239 SVLVGGMGNDVLVGGCGHNTIIGGSGKSVIYAGPQGDIIYASEGGSIIHAGGGDDKIFGG 298
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
G DV E G +I G++DD R D A
Sbjct: 299 FGDDVIEVGHGNATIDGDGGVNIV----SLHGNHDDYRITRTDDGYVVAD 344
Score = 38.6 bits (88), Expect = 3.4, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 13/148 (8%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N ++L S S+I N IA I + G++ + + GN
Sbjct: 1428 GNGDNTVNL-AGSMSNITLGNGNNDIAGD--INKLTVGHGDNKINATGRDADITLGDGNS 1484
Query: 297 VFDGSSG------LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ G+ G D N+ + N + + ++ +
Sbjct: 1485 IITGNVGELEAGQGDNKINVTGRSADITLGDGNS--IITGNVGELEAGQGDNKINVTGRS 1542
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQD 378
D SI+ + L G +
Sbjct: 1543 ADITLGDGNSIITGNINK--LTAGHGDN 1568
>gi|254513404|ref|ZP_05125469.1| alkaline phosphatase [Rhodobacteraceae bacterium KLH11]
gi|221532408|gb|EEE35404.1| alkaline phosphatase [Rhodobacteraceae bacterium KLH11]
Length = 2116
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 52/151 (34%), Gaps = 11/151 (7%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
+ + T+ GDD++ +G + + + I G I +
Sbjct: 1946 DQFLIGTRKKDTLEGDAGDDII----LGLKGRDLLIGNDGDDFIFGGRGRDVIKGGGDDD 2001
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
S+ G G D + G N++ G D DG G D F ++ Y VY
Sbjct: 2002 SLFGGRGRDTIYGGDGNDLIDGGRGRDKLDGGEGDDVFVNVDGGDVFHFYGDFGNDEVYG 2061
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRS 360
+ +VE+ FA D + V++
Sbjct: 2062 DS-------VEVEQFIFAKVNSDDIAVEEVD 2085
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 39/141 (27%), Gaps = 21/141 (14%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G K T+ + ++G G D++IGN ++ F G DV G D
Sbjct: 1942 APAEDQFLIGTRKKDTLEGDAGDDIILGLKGRDLLIGNDGDDFIFGGRGRDVIKGGGDDD 2001
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ F IY + ++ +D L E +
Sbjct: 2002 SLF--GGRGRDTIYGGDGNDLI--DGGRGRDKLDGGE---------------GDDVFVNV 2042
Query: 366 ASYED--LIQVIGQDVFESMK 384
+ G D
Sbjct: 2043 DGGDVFHFYGDFGNDEVYGDS 2063
>gi|317419325|emb|CBN81362.1| Matrix metalloproteinase-17 [Dicentrarchus labrax]
Length = 572
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 60/205 (29%), Gaps = 49/205 (23%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFE------ 71
L W + + + LS + N + AL WS L F
Sbjct: 107 LSGLKWHKTDLTWSVHSYPSPSLSPGLP--NSLVDNILTHALKAWSDAAPLNFRWLPSDS 164
Query: 72 -ETSIHSDIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIG 115
+ DI+ + P + + +FD ++W YG
Sbjct: 165 RVAAAGGDIRVSFTSMFHDDGYPFDGQGGTLAHAFFP-GRNDMAGDTHFDDDEIWSYGGS 223
Query: 116 KGTI-LSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
T L A+HE GHALGL H S Y + +F+
Sbjct: 224 SSTTDLFTVAVHEFGHALGLSHSSSDPSIMRPYYQGPVGDIQNFM--------------- 268
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPK 199
+ D A+Q++YG
Sbjct: 269 --------LALDDKQAIQQLYGVKD 285
>gi|148704402|gb|EDL36349.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_b [Mus
musculus]
Length = 582
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + +
Sbjct: 167 IREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 268
>gi|116073759|ref|ZP_01471021.1| hypothetical protein RS9916_34952 [Synechococcus sp. RS9916]
gi|116069064|gb|EAU74816.1| hypothetical protein RS9916_34952 [Synechococcus sp. RS9916]
Length = 1143
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 63/200 (31%), Gaps = 9/200 (4%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D G I ++ S + N + ++G +GN V+ G S N+ F
Sbjct: 769 DEVGGIGNDRIIIKRDDNVSKTTALKANGFEGH----DRIMGDNGNSVLKGESGNDFFEP 824
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHK--QDFLSDVERLRFADQ 349
G+D DG SG DT Y + I N + ++ K D +S+VE +R
Sbjct: 825 GEGSDTVDGGSGTDTVSYKSLKAAVSIKTSTNNEKIKVSDSSKSWTDEVSNVEIIRTWGG 884
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
++ L L ++ +S + D +
Sbjct: 885 SNHTLTNA--ESLSGKDLGYTLQTGA-TGTTNGSQYDDTLFISYSSNFNTDPANKTLNKT 941
Query: 410 DLRNVFGSDRGAAARHYITH 429
L + G + H
Sbjct: 942 TLVDGKGGNDHLFIDGLAAH 961
>gi|17548516|ref|NP_521856.1| putative hemolysin-type protein [Ralstonia solanacearum GMI1000]
gi|17430763|emb|CAD17446.1| putative hemolysin-type protein [Ralstonia solanacearum GMI1000]
Length = 692
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/323 (10%), Positives = 80/323 (24%), Gaps = 23/323 (7%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMH---PGSY 140
N+ + + G G + H LG H +
Sbjct: 220 GNSADDSFAVNGAAGSYAELYLGNGNNTVSSGDGDVTVHVGAGNNDLILGNGHNVVDANR 279
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS-DIVAVQKIYGAPK 199
P G N+ + ++ + + + T + + G
Sbjct: 280 FLRGPAAGDGNNQAYLGNGDNEVTLGDGNNIVGVGTGDNTITVGNGSNTLYAGHGAGTNT 339
Query: 200 GSLGN-----NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ G+ + + TI+ G + + + +IG
Sbjct: 340 ITFGDGANLVTVGDGDNSVFGGNGNSTIWGGQGANYVTV-------------GSGDDTIG 386
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
+ T+ SV +G++ + ++ +GN+ D G +T + +
Sbjct: 387 LGNGDNTVMAGNGANSVSVGNGDNQITLGGGDDTIGVGAGNNTIDAGGGDNTIYAGRGAG 446
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRF-ADQCIDSVNVKQRSILEYTASYEDLIQ 373
I + +V + L + + + + + L
Sbjct: 447 RNAITAGDGRNVVTVGDGASSVHLGNGNSAVYVGNGNNQIALGGGDNAVNGGNGTNVLAA 506
Query: 374 VIGQDVFESMKHFYEFGLSEGRD 396
G + + G +
Sbjct: 507 GNGNNTVWMGSGSNLIVVGNGNN 529
Score = 44.0 bits (102), Expect = 0.073, Method: Composition-based stats.
Identities = 38/331 (11%), Positives = 83/331 (25%), Gaps = 27/331 (8%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D + LT + +S++ G + +V G+ V + NN
Sbjct: 206 DQIVLTGNREQHVVGNSADDSFAVNGAAGSYAELYLGNGNNTVSSGDGDVTVHVGAGNND 265
Query: 289 FFESSGNDVFD---------GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+G++V D G + + + + IV +
Sbjct: 266 LILGNGHNVVDANRFLRGPAAGDGNNQAYLGNGDNEVTL--GDGNNIVGVGTGDNTITVG 323
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+ + + + + + + + G + +G +
Sbjct: 324 N------GSNTLYAGHGAGTNTITFGDGANLVTVGDGDNSVFGGNGNSTIWGGQGAN--- 374
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
Y+ +GS DD + D A + + + +D I A
Sbjct: 375 --YVTVGSGDDTIGLGNGDNTVMAGN-----GANSVSVGNGDNQITLGGGDDTIGVGAGN 427
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 519
+ G D+ G GR + Y+ +G +
Sbjct: 428 NTIDAGGGDNTIYAGRGAGRNAITAGDGRNVVTVGDGASSVHLGNGNSAVYVGNGNNQIA 487
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAG 550
A+ L + + +G
Sbjct: 488 LGGGDNAVNGGNGTNVLAAGNGNNTVWMGSG 518
>gi|85702912|ref|ZP_01034016.1| alkaline phosphatase [Roseovarius sp. 217]
gi|85671840|gb|EAQ26697.1| alkaline phosphatase [Roseovarius sp. 217]
Length = 1423
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 4/115 (3%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ TI GDD L GG + E S+GG + T+
Sbjct: 1258 GDNDRLGGGQGADTIEGGTGDDNL----GGGAGTDLLDGGEGNDSLGGGFGDDTVLGGAG 1313
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+ + G +DV+ G + N+ GND+ G G+D F + +
Sbjct: 1314 DDFLAGGGRDDVLDGGAGNDTLNGGDGNDLMTGGEGVDVFVFNTLISGEADIITD 1368
>gi|291389397|ref|XP_002711214.1| PREDICTED: matrix metalloproteinase 19 [Oryctolagus cuniculus]
Length = 525
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 59/180 (32%), Gaps = 45/180 (25%)
Query: 35 LTTHRLSFDITELNPN-----AQEVARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGY 88
L+F I L A+E A WS+V LTF+E + +DI+
Sbjct: 104 WRKKHLTFRILNLPSTLPSHIAREALLQAFRYWSEVAPLTFQEVQAGRADIRLSFHGRQS 163
Query: 89 VCTPRYDSRYF-----------MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHP 137
+ ++FD+ ++W G +G L A HE+GHALGL H
Sbjct: 164 LYCSNAFDGPGRVLAHADIPELGSVHFDEDELWTEGTYRGVNLRIIAAHELGHALGLGHS 223
Query: 138 -GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
+ PVY Y D+ +Q +YG
Sbjct: 224 RYTKALMAPVYAGYRPYFR---------------------------LHPDDVAGIQALYG 256
>gi|84500051|ref|ZP_00998317.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
gi|84391985|gb|EAQ04253.1| Hemolysin-type calcium-binding protein [Oceanicola batsensis
HTCC2597]
Length = 659
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 53/408 (12%), Positives = 96/408 (23%), Gaps = 51/408 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ ++ GDD + + L + +GG + T I
Sbjct: 212 GDDMIDGGSGSDSMDGGAGDDTVTYENAASGAMRLSLGGTA--GVGGQSDGDVL---TNI 266
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDG---------------------------S 301
E +GS+ D +IG++ N G D+ G
Sbjct: 267 EHAIGSNFADTIIGSTLANTLNGLGGADLIFGNDGADTIDGGDGDDALVGGGGADNLIGG 326
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
+G+DT Y + + A E + D S +E L + +
Sbjct: 327 AGIDTARYAGSAAVTINLATNTAT----GGEAEGDTFSGIENLVGSQNADILTGDANANR 382
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
E + +G D S+ G G
Sbjct: 383 FEGLGGDDVFQGGLGADTMIGHLGIDTADYSDSASAIEVGIHRTGVGGT---ADGDVLIY 439
Query: 422 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFV 481
R + + +E ++ +I+ A + G D + +
Sbjct: 440 MERIIGSAFGDDLVGGGTAPIIEGAGGNDTIIDYGGAATIMGGDGDDTINAGTGADSIDG 499
Query: 482 TFDSY-----LYLGSYDDLRNVFGSDRGAAARHYITH----GVKEGRNPDAFKALE---Y 529
DL GS A ++ G G
Sbjct: 500 GAGIDTVRYANTSAVQIDLAAGTGSGFAAEGDIFVNVENVVGSNAGDTLTGDDQANRLEG 559
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYD 577
+ + + + L D F GR + + D
Sbjct: 560 LYGEDTIKGGLGNDVLLGGGNADTFVFDAAGFGRDLILDWQDNYDKID 607
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/346 (14%), Positives = 96/346 (27%), Gaps = 12/346 (3%)
Query: 58 ALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKG 117
L + F +T I S + + G + D D G G
Sbjct: 262 VLTNIEHAIGSNFADTIIGSTLANTLNGLGGADLIFGNDGADTIDGGDGDDALVGGGGAD 321
Query: 118 TILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASF 177
++ + +A + E D+F ++
Sbjct: 322 NLIGGAGIDTARYA---GSAAVTINLATNTATGGEAEGDTFSGIENLVGSQNADILTGDA 378
Query: 178 GYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIG 237
+ Q GA I + S I+ +G D ++
Sbjct: 379 NANRFEGLGGDDVFQGGLGADTMIGHLGIDTADYSDSASAIEVGIHRTGVGGTADGDVLI 438
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
++ I GG + A ++++ G ++G ++ +G D
Sbjct: 439 YMERIIGSAFGDDLVGGGTAPIIEGAGG--NDTIIDYGGAATIMGGDGDDTINAGTGADS 496
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
DG +G+DT Y S + + D +VE + ++
Sbjct: 497 IDGGAGIDTVRYANTSAVQIDLAAGTG----SGFAAEGDIFVNVENVVGSNAGDTLTGDD 552
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEF---GLSEGRDITFD 400
Q + LE + + +G DV + F GRD+ D
Sbjct: 553 QANRLEGLYGEDTIKGGLGNDVLLGGGNADTFVFDAAGFGRDLILD 598
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/314 (12%), Positives = 84/314 (26%), Gaps = 11/314 (3%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
I G + + + + GND + + +++ SG+D DG +G DT
Sbjct: 174 PSGVPIIEGTTGDDDFVATSFADIIQADLGNDTIDAGAGDDMIDGGSGSDSMDGGAGDDT 233
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
Y + + D L+++E ++ + + L
Sbjct: 234 VTYENAASGAMRLSLGG--TAGVGGQSDGDVLTNIEHAIGSNFADTIIGSTLANTLNGLG 291
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + + + + D+ + D R +
Sbjct: 292 GADLIFG----NDGADTIDGGDGDDALVGGGGADNLIGGAGIDTARYAGSAAVTINLATN 347
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
G + + + + + D++ A+A +G D G +
Sbjct: 348 TATGGEAEGDTFSGIENLVGSQNADILTGDANANRFEGLGGDDVFQGGLGADTMIGHLGI 407
Query: 487 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 546
Y D + G +G + + A +DL+
Sbjct: 408 DT-ADYSDSASAIEVGIHRT----GVGGTADGDVLIYMERIIGSAFGDDLVGGGTAPIIE 462
Query: 547 VQAGKDHFSNFGYE 560
G D ++G
Sbjct: 463 GAGGNDTIIDYGGA 476
Score = 58.3 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 62/419 (14%), Positives = 110/419 (26%), Gaps = 32/419 (7%)
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
+ + D D+ G G ++ + + + S
Sbjct: 192 TSFADIIQADLGNDTIDAGAGDDMIDGGSGSDSMDGGAGDDTVTY----ENAASGAMRLS 247
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
+ G + D G ++ + I+G G+ +
Sbjct: 248 LGGTAGVGGQSDGDVLTNIEHAIGSNFADTIIGSTLANTLNGLGGADLIFG-NDGADTID 306
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + G D I+L + ++ GG + T +
Sbjct: 307 GGDGDDALVGGGGADNLIGGAGIDTARYAGSAA--VTINL--ATNTATGGEAEGDTFSG- 361
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
IE++VGS D++ G++ N F G+DVF G G DT + +AI
Sbjct: 362 --IENLVGSQNADILTGDANANRFEGLGGDDVFQGGLGADTMIGHLGIDTADYSDSASAI 419
Query: 326 IVY-----DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI-------- 372
V D L +ER+ + D V I+E + +I
Sbjct: 420 EVGIHRTGVGGTADGDVLIYMERIIGSAFGDDLVGGGTAPIIEGAGGNDTIIDYGGAATI 479
Query: 373 -QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLR------NVFGSDRGAAARH 425
G D + G D + D G
Sbjct: 480 MGGDGDDTINAGTGADSIDGGAGIDTVRYANTSAVQIDLAAGTGSGFAAEGDIFVNVENV 539
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
++ D LE + + + + L D F GR + D
Sbjct: 540 VGSNAGDTLTGDDQANRLEGLYGEDTIKGGLGNDVLLGGGNADTFVFDAAGFGRDLILD 598
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/260 (13%), Positives = 57/260 (21%), Gaps = 6/260 (2%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
++ G S + AD+ LG +
Sbjct: 346 TNTATGGEAEGDTFSGIENLVGSQNADILTGDANANRFEGLGGDDVFQGGLGADTMIGH- 404
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G + D + D + +G+
Sbjct: 405 LGIDTADYSDSASAIEVGIHRTGVGGTADGDVLIYMERIIGSAFGDDLVGGGTAPIIEGA 464
Query: 202 LGNNI---YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
GN+ Y TI G D +D Y + + G
Sbjct: 465 GGNDTIIDYGGAATIMGGDGDDTINAGTGADSIDGGAGIDTVRYANTSAVQIDLAAGTGS 524
Query: 259 NMTIAQH--TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+E+VVGS+ D + G+ N G D G G D + +
Sbjct: 525 GFAAEGDIFVNVENVVGSNAGDTLTGDDQANRLEGLYGEDTIKGGLGNDVLLGGGNADTF 584
Query: 317 KIYRFENAIIVYDANEHKQD 336
+ + D
Sbjct: 585 VFDAAGFGRDLILDWQDNYD 604
>gi|113474267|ref|YP_720328.1| cadherin [Trichodesmium erythraeum IMS101]
gi|110165315|gb|ABG49855.1| Cadherin [Trichodesmium erythraeum IMS101]
Length = 938
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 73/263 (27%), Gaps = 15/263 (5%)
Query: 74 SIHSDIKFISSNNGYVCTPRYD-SRYFMEINFDKADVWRYGIGK-GTILSHNALHEIGHA 131
+ + N TP + S + G G + + E+
Sbjct: 628 TDIALSNNTIDENVAANTPIGNLSSTDPDTGDTFTYSLVSGAGDTDNGTFNISGDELTIK 687
Query: 132 LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYF-MPQDSMMDASFGYCATPMVSDIVA 190
+ + V D E ++ +S D G A + +
Sbjct: 688 SSPDYENKPSYSIRVETTDAAGETYQKELTINVNDLFDGNSGNDILRGTAAADSIYGLEG 747
Query: 191 VQKIYG--APKGSLGNNI------YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
K+YG G + Q +Y G+D++ GG
Sbjct: 748 RDKLYGKGGNDIISGGADSDIVKGDSGDDQLNGDDGRDRLYGGTGNDII----SGGEDKD 803
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I + G + T + ++G GND++ G ++ G D GS
Sbjct: 804 IVKGDSGDDQLNGDAGPDRLYGGTGNDILLGGDGNDLLYGQGGDDELNGGPGMDRLYGSD 863
Query: 303 GLDTFFYYAPSYLYKIYRFENAI 325
G+DTF IY F
Sbjct: 864 GIDTFVLGEGQERDSIYNFAVGT 886
Score = 43.2 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 48/405 (11%), Positives = 84/405 (20%), Gaps = 47/405 (11%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
T+ S + N D N + + H + +A
Sbjct: 518 TTDSSGNVLVVGNFSGDVDIDGDGNNDFTSNGNGNHTFTAKY-DSNGNLVWVKHNLHNAY 576
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
+ S N N + S ++ S + P +
Sbjct: 577 TITTDSSGNVLMVSDFNGNIDIDGDGDNDFTSNGDRNGLVVKFSDDTNSPPTDIALSNNT 636
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
+ N+ + D+ + +G D + G
Sbjct: 637 IDENVAANTPIGNLSSTDPDTGDTFTYSLVSGAGDTDNGTFNISGDELTIKSSPDYENKP 696
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
T A + + + ND+ GNS N++ ++ D G G D +
Sbjct: 697 SYSIRVETTDAAGETYQKELTINVNDLFDGNSGNDILRGTAAADSIYGLEGRDKLY---- 752
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
I+ A + +
Sbjct: 753 ------------------------------------------GKGGNDIISGGADSDIVK 770
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 432
G D G DI D + + R Y G
Sbjct: 771 GDSGDDQLNGDDGRDRLYGGTGNDIISGGEDKDIVKGDSGDDQLNGDAGPDRLYGGTGND 830
Query: 433 EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D L ++L G D F +E
Sbjct: 831 ILLGGDGNDLLYGQGGDDELNGGPGMDRLYGSDGIDTFVLGEGQE 875
>gi|163796643|ref|ZP_02190602.1| glutamyl endopeptidase [alpha proteobacterium BAL199]
gi|159178203|gb|EDP62748.1| glutamyl endopeptidase [alpha proteobacterium BAL199]
Length = 444
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/340 (12%), Positives = 96/340 (28%), Gaps = 11/340 (3%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPV--YGVDN 151
+ S +++ + + G I N ++G A G + + + G Y
Sbjct: 81 FGSATSSDLHVPDSYISTGGSFSYDIGVINLGTDLGSATGWFNTQAVSSGDVTGTYVNTA 140
Query: 152 DYENDSFLTSVMSYFMPQDSMM-DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIE 210
Y D + M + S + Y T + ++ + + +
Sbjct: 141 GYPGDLYGGEYMYWAGGTASFAFGNNIYYSDTLDTYGGQSGSPVWWYDSTTGTRTVIGVH 200
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
T+ DL+D + + +++ I G + + ++ ++
Sbjct: 201 TFGGSYYNGGTLLTDDFKDLVDAWTADSDGS-VMTGSDTADVISGTSASDVMYGYSGSDT 259
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +G+D++ GN ++ SG+D G S + R +
Sbjct: 260 LSGGAGDDLIYGNYETDLLIGGSGSDTIYGGQNNGPASTGNGSASDGVSRQREGLETISG 319
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ + L L + L G D +
Sbjct: 320 GDGG-------DVLYGNYGSDLLYGGSGDDRLFGGQDADTLSGGAGSDTLYGNRGDDVLV 372
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G D+ + + +D + G + + G
Sbjct: 373 GGAGSDVFVLTGTGTDTVNDFSSAEGDRIDVGDSNAVVIG 412
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 84/268 (31%), Gaps = 18/268 (6%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ + Y + VW Y GT H G +
Sbjct: 160 SFAFGNNIYYSDTLDTYGGQSGSPVWWYDSTTGTRTVIGV-----HTFGGSYYNGGTLLT 214
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS-----FGYCATPMVSDIVAVQKIYGAPK 199
+ D SVM+ D + S +GY + +S IYG +
Sbjct: 215 DDFKDLVDAWTADSDGSVMTGSDTADVISGTSASDVMYGYSGSDTLSGGAGDDLIYGNYE 274
Query: 200 GSL------GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL-TLIGGVKNYIDLNTESWSS 252
L + IY + S + D L T+ GG +
Sbjct: 275 TDLLIGGSGSDTIYGGQNNGPASTGNGSASDGVSRQREGLETISGGDGGDVLYGNYGSDL 334
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD-GSSGLDTFFYYA 311
+ G + + +++ G +G+D + GN ++V +G+DVF +G DT ++
Sbjct: 335 LYGGSGDDRLFGGQDADTLSGGAGSDTLYGNRGDDVLVGGAGSDVFVLTGTGTDTVNDFS 394
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ +I ++ +V LS
Sbjct: 395 SAEGDRIDVGDSNAVVIGTASSGFALLS 422
>gi|329849052|ref|ZP_08264080.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328844115|gb|EGF93684.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 683
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 72/484 (14%), Positives = 129/484 (26%), Gaps = 32/484 (6%)
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
I ++ G G + + I LG G G
Sbjct: 165 ISGAGGDDQIIGGVLNSLFDGGDGNDNLFGGSGTDLIEGGLGDDTVVGGVGDTLDGGAGK 224
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCAT--PMVSDIVAVQKIYGAPKGSLGNNIYKI 209
D+ +++ + + + T V + G +G N +
Sbjct: 225 DWLGFRISGNLVFDLRIEGAQETGNGIVYVTGVEGVFGWTGNDHLTGTDRGDYLNGMVG- 283
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
T S +D++ T GG DL S S G +
Sbjct: 284 NDTLIGGLGADTYGVSSLNDVIVETAGGGR----DLVEASISYTLGAALENLTLTGSDAI 339
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G+ +V+ GNS N+ + G D G +G D++ + + + V
Sbjct: 340 NGTGNGWGNVITGNSGANLLDGAGGVDTLIGGAGTDSYVVNSAADSVVEVAEQGTDTVL- 398
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQ-RSILEYTASYEDLIQVIGQDVFESMKHFYE 388
+ +VE L ++L A L +G D +
Sbjct: 399 -SSVTYALSGEVENLTLTGTAKIHGTGNGLNNVLTGNAGDNLLRGGLGDDTYYVQNAGDT 457
Query: 389 FG--LSEGRDITFDSYLYL--GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
EG D + GS+ ++ + GS A + + + + +
Sbjct: 458 ITELSGEGNDHVMAGLSFSLAGSHTEILTLTGSADINATGNSLDNHLNGNGGHNVLDGGA 517
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY--LGSYDDLRNVFGSD 502
I D + +G + + S Y +G Y + + GS
Sbjct: 518 GI----DTMAGGLGNDTYYVQFTGDEVVEASGQGTDLIYASVDYDLIGRYVETLTLTGSG 573
Query: 503 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEG 562
A + + L A + L G D F G
Sbjct: 574 YTKAIGNSLA------------NTLNGNAGNNVLDGRGGSDVLTGGLGADVFLFKRASGG 621
Query: 563 RSIT 566
+IT
Sbjct: 622 DTIT 625
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/332 (13%), Positives = 87/332 (26%), Gaps = 31/332 (9%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMT-----IAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
G NY+ + S + GG +++ I+ + ++G N + G N+ F
Sbjct: 135 GDYGNYVFGSAGSDTVEGGAGEDLIWGHGQISGAGGDDQIIGGVLNSLFDGGDGNDNLFG 194
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-------NAIIVYDANEHKQDFLSDVERL 344
SG D+ +G G DT L + ++ E Q+ + +
Sbjct: 195 GSGTDLIEGGLGDDTVVGGVGDTLDGGAGKDWLGFRISGNLVFDLRIEGAQETGNGI--- 251
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
+ L T + L ++G D +G+S D+ ++
Sbjct: 252 VYVTGVEGVFGWTGNDHLTGTDRGDYLNGMVGNDTLIGGLGADTYGVSSLNDVIVETAGG 311
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
+ + G + + L A +
Sbjct: 312 GRDLVEASISYTLGAALENLTLTGSDAINGTGNGWGNVITGNSGANLLDGAGGVDTLIGG 371
Query: 465 VGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
G D + + G+D ++ Y G E
Sbjct: 372 AGTDSYVVNSAADSVVE--------------VAEQGTDTVLSSVTYALSGEVENLTLTGT 417
Query: 525 KALEYIAS--HEDLINAFADAPDLVQAGKDHF 554
+ + + L D G D +
Sbjct: 418 AKIHGTGNGLNNVLTGNAGDNLLRGGLGDDTY 449
Score = 53.6 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 51/362 (14%), Positives = 94/362 (25%), Gaps = 56/362 (15%)
Query: 41 SFDITELNPNAQEVA----RWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDS 96
++ ++ LN E A S + E ++ + NG+ +S
Sbjct: 295 TYGVSSLNDVIVETAGGGRDLVEASISYTLGAALENLTLTGSDAINGTGNGWGNVITGNS 354
Query: 97 RYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEND 156
+ D G G + + N + D
Sbjct: 355 GANLLDGAGGVDTLIGGAGTDSYVV-------------------NSAADSVVEVAEQGTD 395
Query: 157 SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDS 216
+ L+SV + + + + + +
Sbjct: 396 TVLSSVTYALSGEVENLTLTG---------------------TAKIHGTGNGLNNVLTGN 434
Query: 217 PFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSG 276
+ GDD + +L+ E + HT I ++ GS+
Sbjct: 435 AGDNLLRGGLGDDTYYVQN--AGDTITELSGEGNDHVMAGLSFSLAGSHTEILTLTGSA- 491
Query: 277 NDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYD 329
+ GNS +N + G++V DG +G+DT YY ++
Sbjct: 492 DINATGNSLDNHLNGNGGHNVLDGGAGIDTMAGGLGNDTYYVQFTGDEVVEASGQGTDLI 551
Query: 330 ANEHKQDFLSD-VERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D + VE L ++ + L A L G DV
Sbjct: 552 YASVDYDLIGRYVETLTLTGSGYTKAIGNSLANTLNGNAGNNVLDGRGGSDVLTGGLGAD 611
Query: 388 EF 389
F
Sbjct: 612 VF 613
Score = 42.1 bits (97), Expect = 0.28, Method: Composition-based stats.
Identities = 48/387 (12%), Positives = 90/387 (23%), Gaps = 85/387 (21%)
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVV-------------IGNSAN 286
ID + G N T++ +++ G G+D + +
Sbjct: 6 WTLIDGKASVLALYEGGPDNDTLSGGPDDDTLYGYGGDDDLSGGGGNDTLYDGDFAQDGS 65
Query: 287 NVFFESSGND----------VFDGSSGLDTFFYYAP------------------------ 312
+ G+D V DG +G D
Sbjct: 66 DTLSGGDGDDVIYVLGGYDEVIDGGAGTDILVLDLSHTDWSGDFWLGDGYVVEQGGIFVS 125
Query: 313 --------SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
Y Y F +A +D + ++ A + S+ +
Sbjct: 126 GIEAFHLILGDYGNYVFGSAGSDTVEGGAGEDLIWGHGQISGAGGDDQIIGGVLNSLFDG 185
Query: 365 TASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA-A 423
++L G D+ E D + G D L G D
Sbjct: 186 GDGNDNLFGGSGTDLIEGGLG--------------DDTVVGGVGDTLDGGAGKDWLGFRI 231
Query: 424 RHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
+ ++ + + Y+ E + + D+ + +
Sbjct: 232 SGNLVFDLRIEGAQETGNGIVYVTGVEGVFGWTGNDHLTGTDRGDYLNGMVGNDTLIGGL 291
Query: 484 DSYLYLGSYDDLR----NVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH------ 533
+ Y S + G D A+ Y E A+ +
Sbjct: 292 GADTYGVSSLNDVIVETAGGGRDLVEASISYTLGAALENLTLTGSDAINGTGNGWGNVIT 351
Query: 534 -----EDLINAFADAPDLVQAGKDHFS 555
L A + AG D +
Sbjct: 352 GNSGANLLDGAGGVDTLIGGAGTDSYV 378
>gi|301760460|ref|XP_002916079.1| PREDICTED: matrix metalloproteinase-19-like [Ailuropoda
melanoleuca]
Length = 547
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 51/162 (31%), Gaps = 38/162 (23%)
Query: 50 NAQEVARWALGEWSKVVDLTFEETSIH-SDIKFISSN--NGYVCTPRYDSRY-------- 98
A+ A WS V LTF E +DI+ + Y P
Sbjct: 125 TARAALLQAFRYWSNVAPLTFREVQAGWADIRLSFHGRQSPYCSKPFDGPGRVLAHADIP 184
Query: 99 -FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
++FD+ ++W G G L A HE+GHALGL H
Sbjct: 185 ELGSVHFDEDELWTEGTSGGVNLRIIAAHELGHALGLGH--------------------- 223
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
Y + + A + D+ +Q +YG
Sbjct: 224 -----SRYTQALMAPVYAGYRAHFKLHPDDVAGIQALYGKKS 260
>gi|326931304|ref|XP_003211772.1| PREDICTED: matrix metalloproteinase-28-like [Meleagris gallopavo]
Length = 443
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 59/194 (30%), Gaps = 46/194 (23%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
W + Y+ + ++ + R A WS V L F E +D
Sbjct: 51 GSKWHKRHLTYRVVNWPPYLPQHEV-------RLAVRAAFELWSNVSSLVFWEARDGPAD 103
Query: 79 IKFIS----SNNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNALH 126
I+ N+G E +FD A+ W GKG L H
Sbjct: 104 IRLTFFHGDHNDGLNNAFDGPGGALAHAFFPRRGEAHFDSAERWSLHSGKGRNLFVVVAH 163
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH LGL H + + Y D +
Sbjct: 164 EVGHTLGLEHSPTKSALMSPYYKKL--------------------GKDFVLNW------D 197
Query: 187 DIVAVQKIYGAPKG 200
DI+A+Q +YG P G
Sbjct: 198 DILAIQNLYGKPSG 211
>gi|224063802|ref|XP_002195237.1| PREDICTED: matrix metallopeptidase 15 (membrane-inserted)
[Taeniopygia guttata]
Length = 557
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 56/212 (26%), Gaps = 56/212 (26%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH- 76
L + WS + + T + E R A W + L F E +
Sbjct: 121 LTGRRWSQSHLTFSIQNYTEKLGRYHSHE-------AVRRAFRVWEQATPLVFREVAYED 173
Query: 77 --------SDIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYG 113
+DI + ++ + P + D+
Sbjct: 174 IRQKRKKEADIMVLFASGFHGDSSPFDGLGGFLAHAYFPGPGMGGDTHFDLDEPWTLENA 233
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMM 173
G L A+HE+GH+LGL H P + Y+ +
Sbjct: 234 DVSGNNLFLVAVHELGHSLGLEHS-----SNPSAIMAPFYQWMDTENFQLPED------- 281
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
D+ +Q++YG G
Sbjct: 282 -------------DLKGIQQLYGTADGHPQPT 300
>gi|261349826|ref|ZP_05975243.1| glycosyl transferase, group 2 family [Methanobrevibacter smithii
DSM 2374]
gi|288860610|gb|EFC92908.1| glycosyl transferase, group 2 family [Methanobrevibacter smithii
DSM 2374]
Length = 533
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 18/104 (17%)
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D A ++Y +G E F Y +++D+ G H+ GY E
Sbjct: 15 DFRKAMKNYKYYGAIE--ESGLFDEKFYSKTYDDVKG----------DGLTHYLVKGYLE 62
Query: 562 GR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
GR S+ F+PD Y +Y D+ + HYI HG EG+
Sbjct: 63 GRLPSLDFDPDFYNNNYPDVHRA----QLNPLLHYIAHGKDEGK 102
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 16/101 (15%)
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AF 524
++ +G E FD Y +YDD++ G HY+ G EGR P F
Sbjct: 19 AMKNYKYYGAIE-ESGLFDEKFYSKTYDDVK-------GDGLTHYLVKGYLEGRLPSLDF 70
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
Y ++ D+ A + H+ G +EG+
Sbjct: 71 DPDFYNNNYPDVHRAQLNPLL-------HYIAHGKDEGKIF 104
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 18/103 (17%)
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D A ++Y +G E F Y +++D+ G H+ G E
Sbjct: 15 DFRKAMKNYKYYGAIE--ESGLFDEKFYSKTYDDV----------KGDGLTHYLVKGYLE 62
Query: 478 GRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
GR FD Y +Y D+ + HYI HG EG
Sbjct: 63 GRLPSLDFDPDFYNNNYPDVHRAQLN----PLLHYIAHGKDEG 101
Score = 40.9 bits (94), Expect = 0.79, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 14/83 (16%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLR 412
+ Y+ +Y+D+ + + H+ G EGR + FD Y +Y D+
Sbjct: 32 SGLFDEKF-YSKTYDDVKG-------DGLTHYLVKGYLEGRLPSLDFDPDFYNNNYPDVH 83
Query: 413 NVFGSDRGAAARHYITHGVKEGR 435
+ HYI HG EG+
Sbjct: 84 RA----QLNPLLHYIAHGKDEGK 102
>gi|83941972|ref|ZP_00954434.1| type I secretion target repeat protein [Sulfitobacter sp. EE-36]
gi|83847792|gb|EAP85667.1| type I secretion target repeat protein [Sulfitobacter sp. EE-36]
Length = 1089
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 53/485 (10%), Positives = 121/485 (24%), Gaps = 45/485 (9%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDI 79
D F ++ ++ IT + + ++ + T E D
Sbjct: 240 DTTEETTFSWANQNIEDGVSVTGGITGVTSSGNIQVTMSVDQGENFRSATMERNDPLYDY 299
Query: 80 KFISSNN-----GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+S ++ G ++ + T + G +
Sbjct: 300 NELSDSSSIHILGGAAGSDPNTAKMSIDFSSLDSGVSDEVSNVTFGIFDIDQAYGFVDEV 359
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ G + +D+ + + + + DI
Sbjct: 360 IVRAYDADGNLIPVNLTAGNSDTLDVNDETGRAISTDAGRGTTNAKTGFLQVDIAGPVSR 419
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ + ++ D G+D LD +I
Sbjct: 420 IEIEYNNHDPDDTGHAIRVGDLKMSTISATDAGNDTLD-------------GGAGNDTIY 466
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + +++ +S+ G SG+D + G + ++ +GND G D F
Sbjct: 467 GDGGDDSLSGGADNDSLSGGSGDDRIEGGTGHDTIAGGTGNDAMSGGDDADLFVMEDDFG 526
Query: 315 LYKIYRFENA---------------IIVYDANEHKQDF-------LSDVERLRFADQCID 352
KI E + Y E +++E+L +
Sbjct: 527 TDKIAGGEGGKDYDVVTFDALSNGVSVTYTGAEAGTATEGPNSVSFTEIEKLVLTNSSDY 586
Query: 353 SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT-----FDSYLYLGS 407
++ A + + G ++ G D+ + +
Sbjct: 587 VDASIGGVAVDTGAGDDTIKVGDGAYDIDAGTGDDRIIREAGTTTDDANSVTDAGDGIDT 646
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
Y + A + H + + F+ + S + D + K
Sbjct: 647 YVAGSGLGADHTVDLAASRLDHAGSDRGDLLNFENVALENSAASVKGDSKDNTITARGTK 706
Query: 468 DHFSN 472
D+ +
Sbjct: 707 DNSLS 711
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 35/292 (11%), Positives = 59/292 (20%), Gaps = 45/292 (15%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ D+ F+ + D G G G+
Sbjct: 495 GTGHDTIAGGTGNDAMSGGDDADLFVMEDDFGTDKIAGGEGGKDYDVVTFDALSN---GV 551
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
+ N V++ I
Sbjct: 552 SVTYTGAEAGTATEGPNSVSFTEIEKLVLTNSSDYVDASIGGVAVDTGAGDDTIKVGDGA 611
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
Y G+ + I + D T G D G + +DL G
Sbjct: 612 YDIDAGTGDDRIIREAGTTTDDANSVT-DAGDGIDTYVAGSGLGADHTVDLAASRLDHAG 670
Query: 255 GYEKNMTIAQHTVIESVVGS---------------------------------------- 274
++ ++ +E+ S
Sbjct: 671 SDRGDLLNFENVALENSAASVKGDSKDNTITARGTKDNSLSGGDGNDSIDGGGGDDNLHG 730
Query: 275 -SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+G D +IG N+ G+D G G D F Y + N
Sbjct: 731 DAGRDTLIGGDGNDTLDGGQGDDQLTGGDGDDVFVYSGGHDTITDFNAGNTG 782
Score = 44.0 bits (102), Expect = 0.080, Method: Composition-based stats.
Identities = 62/454 (13%), Positives = 113/454 (24%), Gaps = 42/454 (9%)
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
PG+ G G + + + DA Y AT +D
Sbjct: 51 SPGARGYGNTARGTYSTDNSGENGSDTFRINDGNSQNFDAIASYAATLTYADGSQATVTA 110
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN-------------- 241
+ + G+ S Q+ ++G D + + ++
Sbjct: 111 IVFQSTNGD---LFLAPAASSSDYQSALEAGPIDSITFNTVSSNESMMYASRVDADYVAP 167
Query: 242 --YIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+D + S G ++ +GND + S ++ +GND
Sbjct: 168 DGTVDGTSGDDSMRVGSTDAQADEVDNSGNAIKLGAGNDKISAGSGDDTILGGAGNDYIA 227
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENA----IIVYDANEHKQDFLSDVERL-------RFAD 348
G+ G D A + + + N + +++ F
Sbjct: 228 GNDGDDRIHGDADTTEETTFSWANQNIEDGVSVTGGITGVTSSGNIQVTMSVDQGENFRS 287
Query: 349 QCIDSVNVKQR-SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
++ + + L ++S L G D + S ++ +
Sbjct: 288 ATMERNDPLYDYNELSDSSSIHILGGAAGSDPNTAKMSIDF--SSLDSGVSDEVSNVTFG 345
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
D+ +G R Y G N A + + E DA K
Sbjct: 346 IFDIDQAYGFVDEVIVRAYDADGNLIPVNLTAGNSDTLDVNDETGRAISTDAGRGTTNAK 405
Query: 468 DHFSNFGCE--------EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHY-ITHGVKEG 518
F E D + DL+ S A G
Sbjct: 406 TGFLQVDIAGPVSRIEIEYNNHDPDDTGHAIRVGDLKMSTISATDAGNDTLDGGAGNDTI 465
Query: 519 RNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
+L A ++ L D G D
Sbjct: 466 YGDGGDDSLSGGADNDSLSGGSGDDRIEGGTGHD 499
>gi|81300096|ref|YP_400304.1| VCBS [Synechococcus elongatus PCC 7942]
gi|81168977|gb|ABB57317.1| VCBS [Synechococcus elongatus PCC 7942]
Length = 610
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 58/452 (12%), Positives = 127/452 (28%), Gaps = 24/452 (5%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
F ++NG + D+ Y D + + K + + + + L +
Sbjct: 69 FTLNSNGSYSFDQDDTSYDSLGLGDTQVIAIDYVVKDSRGAVSQTRTLTINLAGTNDAPT 128
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ-KIYGAPK 199
PV ++ + S + + +P S I A+ ++G
Sbjct: 129 ITAGPVVDANSITFTAEDIDSDTLTARVGTTNLMPGTVNNGSPTTSTITALDTALFGELN 188
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-------DLTLIGGVKNYIDLNTESWSS 252
G + + + + G + D L G ++ L + +
Sbjct: 189 VFDGTDSVGVGLFVGIGTIGADTLTAIGTNPAVLYGFEGDDRLTGADQDDTILGGDGNDT 248
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
I N I + +S+VG + +D + G + + G D DG G D+ F +
Sbjct: 249 IIEINGNNLIEGNNNNDSIVGGTDSDRINGGAGADTILGGDGADTIDGGLGNDSIFGDSG 308
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE--- 369
+ + + N I+ N+ + ++ + + + S L +
Sbjct: 309 NDNIRGFGDSNTILGGSGNDTIEGTIAGSNSIDGGENDDVITEIGFGSTLLGGLGNDSIL 368
Query: 370 -----DLIQVIGQDVFESMKHFYEFGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRG 420
+ G D G D S+ GS + + G+D
Sbjct: 369 GFSASTINGGDGSDTINVEFGNNTIDGGMGNDSIEIAINPSFTISGSGNTVSGSNGNDTI 428
Query: 421 AAARHY----ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
A + + + L D + E
Sbjct: 429 IAINGSNLIEGNNDNDSIVGGTDSDTINGGTGADTLTGGLGSDTFSFAATGDGIAATSGE 488
Query: 477 EGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
G + + Y+ ++ + ++ G +
Sbjct: 489 NGSVTFGNGFDYITDFESIDSIIVGTDGFTIQ 520
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/314 (13%), Positives = 94/314 (29%), Gaps = 10/314 (3%)
Query: 90 CTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGV 149
+ + AD G G TI I G + + + G
Sbjct: 265 DSIVGGTDSDRINGGAGADTILGGDGADTIDGGLGNDSIFGDSGNDNIRGFGDSNTILGG 324
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKI 209
+ + + S ++ + G+ +T + + A + G+
Sbjct: 325 SGNDTIEGTIAGSNSIDGGENDDVITEIGFGSTLLGGLGNDSILGFSASTINGGD----G 380
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
TI G+D +++ + + S +++ G N TI
Sbjct: 381 SDTINVEFGNNTIDGGMGNDSIEIAINPSFTI-----SGSGNTVSGSNGNDTIIAINGSN 435
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G++ ND ++G + ++ +G D G G DTF + A EN + +
Sbjct: 436 LIEGNNDNDSIVGGTDSDTINGGTGADTLTGGLGSDTFSFAATGDGIAATSGENGSVTFG 495
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
++ + + + ++ +Y + + D+F ++
Sbjct: 496 NGFDYITDFESIDSIIVGTDGFTIQSSVGTAFIDGDGNYVIVSVGMISDIF-AIAGVLTD 554
Query: 390 GLSEGRDITFDSYL 403
E RD
Sbjct: 555 TTFESRDPGMGDSF 568
Score = 42.1 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 28/297 (9%), Positives = 67/297 (22%), Gaps = 34/297 (11%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ V+ G ++ + +D G G DT + L + ++I+ ++
Sbjct: 216 GTNPAVLYGFEGDDRLTGADQDDTILGGDGNDTIIEINGNNLIEGNNNNDSIVGGTDSD- 274
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
R+ + ++ + + G D
Sbjct: 275 ---------RINGGAGADTILGGDGADTIDGGLGNDSIFGDSGNDNIRGFGDSNTILGGS 325
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLI 453
G D + D G G S +
Sbjct: 326 GNDTI---------EGTIAGSNSIDGGENDDVITEIGFGSTLLGGLGNDSILGFSASTIN 376
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITH 513
V+ G + + + + + + + GS+
Sbjct: 377 GGDGSDTINVEFGNNTIDGGMGNDSIEIAINPSFTISGSGNTVS--GSNGNDTIIAINGS 434
Query: 514 GVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPD 570
+ EG ++++ D + G + G + +F
Sbjct: 435 NLIEG-------------NNDNDSIVGGTDSDTINGGTGADTLTGGLGSDTFSFAAT 478
>gi|296216047|ref|XP_002754396.1| PREDICTED: stromelysin-2 [Callithrix jacchus]
Length = 477
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 54/193 (27%), Gaps = 46/193 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ TT + AL W +V LTF
Sbjct: 109 WRKTHLTYRIMKYTTDLPRNAVDS-------AIEKALKVWEEVTPLTFSRLYEGEADILI 161
Query: 73 ---TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F ++ +I+FD + W GT L A HE+
Sbjct: 162 SFVVKEHGDFYSFDGPGYSLAHAYPPGPGFYGDIHFDDDENWTEDT-SGTNLFLVAAHEL 220
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H N + + D+
Sbjct: 221 GHSLGLFH------------SANPEALMHPVY------------NSFTDLTPFRLSQDDV 256
Query: 189 VAVQKIYGAPKGS 201
+Q +YG P+ S
Sbjct: 257 NGIQSLYGLPRAS 269
>gi|260432186|ref|ZP_05786157.1| type I secretion target repeat protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416014|gb|EEX09273.1| type I secretion target repeat protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 338
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 51/172 (29%), Gaps = 13/172 (7%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKN 259
N Y+ E + ++ G DLL D TL G + I + G+ N
Sbjct: 97 NGYQGEDTIEGGDGRDVLHGGDGTDLLAGGADDDTLHGEDGDDILTGETGDDQLFGHFGN 156
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-YYAPSYLYKI 318
+ +++ G GND + G ++ G+D G +G D F ++
Sbjct: 157 DLLNGGAGSDALNGGQGNDDLSGADGDDSLQGGQGDDTLTGGAGADALFGGDGNDFVDGF 216
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
E + D + A + + D
Sbjct: 217 SLEEEPEADFLNGGAGDDTI-------LAGTGDVVTGGQGADQIVLGDGQPD 261
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 63/189 (33%), Gaps = 10/189 (5%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
+L ++G +N + E I GY+ TI + + G G D++ G + ++
Sbjct: 75 NLVIVGSAQNDVMTGQEGDDQINGYQGEDTIEGGDGRDVLHGGDGTDLLAGGADDDTLHG 134
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCI 351
G+D+ G +G D F + + L A D LS AD
Sbjct: 135 EDGDDILTGETGDDQLFGHFGNDLL----NGGAGSDALNGGQGNDDLSG------ADGDD 184
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ L A + L G D + E D + G+ D +
Sbjct: 185 SLQGGQGDDTLTGGAGADALFGGDGNDFVDGFSLEEEPEADFLNGGAGDDTILAGTGDVV 244
Query: 412 RNVFGSDRG 420
G+D+
Sbjct: 245 TGGQGADQI 253
Score = 40.5 bits (93), Expect = 0.88, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 30/135 (22%)
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ +E + L G D+ +G DI +
Sbjct: 92 GDDQINGYQGEDTIEGGDGRDVLHGGDGTDLLAGGADDDTLHGEDGDDILTGETGDDQLF 151
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
N + + G + D +L+ + L G D
Sbjct: 152 GHFGNDLLNGGAGSDALNGGQGNDDLSGADGDDSLQGGQGDDTLTGGAGADALFGGDGND 211
Query: 469 HFSNFGCEEGRFVTF 483
F EE F
Sbjct: 212 FVDGFSLEEEPEADF 226
>gi|158333507|ref|YP_001514679.1| peroxidase family protein [Acaryochloris marina MBIC11017]
gi|158303748|gb|ABW25365.1| peroxidase family, putative [Acaryochloris marina MBIC11017]
Length = 788
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 76/209 (36%), Gaps = 14/209 (6%)
Query: 187 DIVAVQKIYGAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
++ + ++ + +N+++ E + ++ + +DL+D ++I
Sbjct: 569 NLADIIRLNTTQDYLVQDNVFQVPYESKILGDDGQNSLRGTRQNDLID---GLEGNDFIR 625
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
N + + G + + ++V+G GNDV+ G++ N+V +GND+ G +G
Sbjct: 626 GNFGA-DILIGNLGDDYLVGGAGDDTVIGGDGNDVLTGSADNDVLVAGNGNDMVRGGNGN 684
Query: 305 DTF----FYYAPSYLYKIYRFENAIIVYDANE----HKQDFLSDVERLRFADQCIDSVNV 356
D + + + +E +K L+ ++R I+
Sbjct: 685 DIINGVGDQFGQRDFDLLKGGRGEDVFILGDERSVFYKGQGLAIIQRFELNRDTIELAGS 744
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKH 385
L S L D+ ++
Sbjct: 745 AADYTLMTFGSRTSLSLAGSNDLIAILEG 773
Score = 45.2 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 31/141 (21%), Gaps = 28/141 (19%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
++V ++G+ N + ND+ DG G D +
Sbjct: 586 DNVFQVPYESKILGDDGQNSLRGTRQNDLIDGLEGND----------------------F 623
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
D L V + + L DV +
Sbjct: 624 IRGNFGADILIG------NLGDDYLVGGAGDDTVIGGDGNDVLTGSADNDVLVAGNGNDM 677
Query: 389 FGLSEGRDITFDSYLYLGSYD 409
G DI G D
Sbjct: 678 VRGGNGNDIINGVGDQFGQRD 698
>gi|148652894|ref|YP_001279987.1| putative outer membrane adhesin-like protein [Psychrobacter sp.
PRwf-1]
gi|148571978|gb|ABQ94037.1| putative outer membrane adhesin like proteiin [Psychrobacter sp.
PRwf-1]
Length = 5098
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 66/206 (32%), Gaps = 4/206 (1%)
Query: 224 DSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGN 283
+ GDD LD + G + N + + G +G+D + G
Sbjct: 4885 GTTGDDKLDSSD--QDVALTYSGGTGDDIFIGGKGNDIFNGDAGDDILSGGAGHDKLYGG 4942
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
+ N+ +G D G G D Y AP L ++++ +++ DF
Sbjct: 4943 AGNDYLDGGTGFDYLSGGEGNDVIVY-APDNLSMNGGGGIDTLLFNRDDYTLDFDKISAS 5001
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+F + + + + + L + D K G SE ++
Sbjct: 5002 AKFDQLEVIDMTGNGSQTITNLKTNDVLEVINDLDRLMDNKGLIIKGDSE-DTVSLKGND 5060
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITH 429
+L + L++ + + H
Sbjct: 5061 WLQAGSTLQDGVNYNVYTFNSDHGRH 5086
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 59/198 (29%), Gaps = 14/198 (7%)
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
ID+ + + + V + G +G+D+ IG N++F +G+D+
Sbjct: 4870 TETVRIDIAPTVVFRGTTGDDKLDSSDQDVALTYSGGTGDDIFIGGKGNDIFNGDAGDDI 4929
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G +G D + + + + + + +A +
Sbjct: 4930 LSGGAGHDKLY--GGAGNDYLDGGTGFDYLSGGEGNDV--------IVYAPDNLSMNGGG 4979
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
L + L D + F + + + + L + D L +
Sbjct: 4980 GIDTLLFNRDDYTLD----FDKISASAKFDQLEVIDMTGNGSQTITNLKTNDVLEVINDL 5035
Query: 418 DRGAAARHYITHGVKEGR 435
DR + I G E
Sbjct: 5036 DRLMDNKGLIIKGDSEDT 5053
>gi|118100110|ref|XP_415771.2| PREDICTED: similar to matrix metalloproteinase-28 [Gallus gallus]
Length = 498
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 58/193 (30%), Gaps = 46/193 (23%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
W + Y+ + ++ + R A WS V L F E +D
Sbjct: 106 GSKWHKRHLTYRMVNWPPYLPQHEV-------RLAVRAAFELWSNVSSLVFWEARDGPAD 158
Query: 79 IKFIS----SNNGYVCTPRYDSRYF--------MEINFDKADVWRYGIGKGTILSHNALH 126
I+ N+G E +FD A+ W GKG L H
Sbjct: 159 IRLTFFHGDHNDGLNNAFDGPGGALAHAFFPRRGEAHFDSAERWSLHSGKGRNLFVVVAH 218
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH LGL H + + Y D +
Sbjct: 219 EVGHTLGLEHSPTKSALMSPYYKKL--------------------GKDFVLNW------D 252
Query: 187 DIVAVQKIYGAPK 199
DI+A+Q +YG P
Sbjct: 253 DILAIQNLYGKPS 265
>gi|256829125|ref|YP_003157853.1| hemolysin-type calcium-binding protein [Desulfomicrobium baculatum
DSM 4028]
gi|256578301|gb|ACU89437.1| Hemolysin-type calcium-binding region [Desulfomicrobium baculatum DSM
4028]
Length = 8980
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/327 (13%), Positives = 96/327 (29%), Gaps = 30/327 (9%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
S S ++ + + + + F+ + +G + + + G
Sbjct: 8455 VSISFGSGDNIVNVRGTAAGSTIFLTTGDGDDTFNISSDAPTNLGNLDGIRGDLVLAGGA 8514
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV-SDIV 189
+ +++ GV + + +T + G A +D +
Sbjct: 8515 GVNILNVSDRGNTTGRTGVVITDHDITGMTGDAGGSGIIGFDGSFNDGVNAYFGSGADGI 8574
Query: 190 AVQKIYGAPKGS-------LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
VQ G G G++ + ++ G D LD + +
Sbjct: 8575 TVQ---GVRPGRIFEIRVGAGDDTVTAVDAVAGEDGLLIVFGESGSDTLDASAWNSGVVF 8631
Query: 243 IDLNTESWSSIGGYEKNM-----TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ + S +N+ + ++G +GND++IG +++ +GNDV
Sbjct: 8632 FGDDGVATSRGSMTPENLVSLESAAPAGDGNDILIGGTGNDILIGVGGDDMLRGGAGNDV 8691
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVK 357
G +G TF +E + ++ D L +
Sbjct: 8692 LIGDAGRVTFRNGE--------LYEAGTLGRYSSSDGDDTLDG------GAGNDFMFGGE 8737
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMK 384
+ S + +I G+ K
Sbjct: 8738 GSDLFYGDLSEDVMIGKYGKVTLSGGK 8764
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 52/383 (13%), Positives = 96/383 (25%), Gaps = 46/383 (12%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
+DI + + + + G GT+ AL +I G
Sbjct: 8356 DSDNDIVIVPGILSATTILTGGGDDAIHVGSNADASGSTG---GTMAGITALLDI---DG 8409
Query: 134 LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
HP G ND T++ MP + D + +
Sbjct: 8410 GDHPSGDTLVIDDSGNTNDSSCILDGTTLTMTGMPGSIQYVRIENVSISFGSGDNIVNVR 8469
Query: 194 IYGAPKG---SLGNNIYKIE---------VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKN 241
A + G+ + G ++L+++ G
Sbjct: 8470 GTAAGSTIFLTTGDGDDTFNISSDAPTNLGNLDGIRGDLVLAGGAGVNILNVSDRGNTTG 8529
Query: 242 YI-------DLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE--- 291
D+ + + G + + + + GS + + + FE
Sbjct: 8530 RTGVVITDHDITGMTGDAGGSGIIGFDGSFNDGVNAYFGSGADGITVQGVRPGRIFEIRV 8589
Query: 292 SSGNDVF---------------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
+G+D G SG DT A ++ + F + + +
Sbjct: 8590 GAGDDTVTAVDAVAGEDGLLIVFGESGSDTL--DASAWNSGVVFFGDDGVATSRGSMTPE 8647
Query: 337 FLSDVERLRFA-DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
L +E A D + IL + L G DV F E
Sbjct: 8648 NLVSLESAAPAGDGNDILIGGTGNDILIGVGGDDMLRGGAGNDVLIGDAGRVTFRNGELY 8707
Query: 396 DITFDSYLYLGSYDDLRNVFGSD 418
+ DD + +
Sbjct: 8708 EAGTLGRYSSSDGDDTLDGGAGN 8730
Score = 37.5 bits (85), Expect = 7.6, Method: Composition-based stats.
Identities = 66/545 (12%), Positives = 138/545 (25%), Gaps = 47/545 (8%)
Query: 70 FEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
F ++S + +N R + + ++ + + + +H G
Sbjct: 8172 FIDSSGGIYNGNVGGSNVTSGKTRLYASADIGTAGNQLETVVGHLEGRSTSGSVYIHNSG 8231
Query: 130 H-ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
H +G + G+ + + +V + + + D +V
Sbjct: 8232 HLTVGGVSDGAEGILATGSVILVASSPITVSETVQAASITMTASEDGVD-IDDNLVVEAG 8290
Query: 189 VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
V V G G+++ +E + +Y G++ + ++I + I T
Sbjct: 8291 VTVWSTTGDVTLYAGDDLIIVEGATVRAAGSVFLYGDYGNNDAEGSII-DLHGTIQAQTG 8349
Query: 249 SWSSIGGYEKNMTIAQHTV-IESVVGSSGNDVVIGNSANNVFFESSGNDV-------FDG 300
S G + ++ I + +++ G+D + S + + G DG
Sbjct: 8350 SVQVFGDSDNDIVIVPGILSATTILTGGGDDAIHVGSNADASGSTGGTMAGITALLDIDG 8409
Query: 301 SSG--LDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA----------- 347
DT + + +E + +
Sbjct: 8410 GDHPSGDTLVIDDSGNTNDSSCILDGTTLTMTGMPGSIQYVRIENVSISFGSGDNIVNVR 8469
Query: 348 ----DQCIDSVNVKQRSILEYTASYED----LIQVIGQDVFESMKHFYEFGLSEGRDITF 399
I ++ L + G V +S+ + T
Sbjct: 8470 GTAAGSTIFLTTGDGDDTFNISSDAPTNLGNLDGIRGDLVLAGGAGVNILNVSDRGNTTG 8529
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
+ + + D+ + G G+ + A F
Sbjct: 8530 RTGVVITD-HDITGMTGDAGGSGIIGFDGSFNDGVNAYFGSGADGITVQGVRPGRIFEIR 8588
Query: 460 PDLVQVGKDHFSNFGCEEGRFVTF-----DSYLYLGSYDDLRNVFGSDRGAA-----ARH 509
E+G + F D+ + FG D A
Sbjct: 8589 VGAGDDTVTAVDAVAGEDGLLIVFGESGSDTLDASAWNSGVV-FFGDDGVATSRGSMTPE 8647
Query: 510 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNP 569
+ D L ++ LI D AG D + GR N
Sbjct: 8648 NLVSLESAAPAGDGNDILIGGTGNDILIGVGGDDMLRGGAGNDVLI---GDAGRVTFRNG 8704
Query: 570 DLYLT 574
+LY
Sbjct: 8705 ELYEA 8709
>gi|225706878|gb|ACO09285.1| Collagenase 3 precursor [Osmerus mordax]
Length = 470
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 62/198 (31%), Gaps = 48/198 (24%)
Query: 25 NYFIRY-KPDVLTTHRLSFDITELNPNAQEV-----ARWALGEWSKVVDLTFEET-SIHS 77
F + T++L++ I P+ AL W+KV LTF S ++
Sbjct: 95 AAFSTFQNSPKWQTNQLTYRIVNYTPDMSASEVDFSIEKALQVWAKVSPLTFTRIYSGNA 154
Query: 78 DIKFISS---------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + P + +FD+ + + +G +G L
Sbjct: 155 DIMVSFGGREHGDFYPFDGPDGTLAHAFAPS--PGIGGDAHFDEDETFTFGSSRGYNLFM 212
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
A HE GH++GL H + + + ++ +
Sbjct: 213 VAAHEFGHSMGLSHSNDVGA---------------LMYPIYQGYNDPNTYVLPRD----- 252
Query: 183 PMVSDIVAVQKIYGAPKG 200
D+ +Q +YG
Sbjct: 253 ----DVNGIQSLYGPNSD 266
>gi|262276072|ref|ZP_06053881.1| hemolysin-type calcium-binding region [Grimontia hollisae CIP
101886]
gi|262219880|gb|EEY71196.1| hemolysin-type calcium-binding region [Grimontia hollisae CIP
101886]
Length = 691
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 16/178 (8%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+ Q + G +D + +GG + + I G E + T+
Sbjct: 385 SYGALIDNVSLKQKVLAEGDNDTI----LGGSGDDTIYGEQGDDYIEGNEGDDTLRGGAG 440
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF------YYAPSYLYKIYRF 321
+++ G +GNDV++GN +++ + G+D+ G SG D + Y Y
Sbjct: 441 NDTIYGGAGNDVLLGNEGDDILYGGDGDDILRGGSGSDALYGGAGNDYLQAGYDDDYILD 500
Query: 322 ENAIIVYDANEHKQDFL----SDVERLRF--ADQCIDSVNVKQRSILEYTASYEDLIQ 373
+ + D L D + F + I + ++ + DL
Sbjct: 501 GGSGLDLYRGSEGNDILLFDQEDFSDVNFLKENGNIYLGDRGFDQLIVNGDANVDLTG 558
Score = 44.8 bits (104), Expect = 0.053, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 246 NTESWSSIGGYEKNMTIAQ---HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
+ G N+++ ++ +++ G G D + G N+ F GND G
Sbjct: 150 GKGASDGYGALIDNVSLTNAKAGSLDDTINGFEGEDNIDGGQGNDTLFGGEGNDTLKGGE 209
Query: 303 GLDTFFYYAPSY 314
G DT + +
Sbjct: 210 GNDTIYGNKGTG 221
>gi|126740772|ref|ZP_01756457.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
gi|126718068|gb|EBA14785.1| type I secretion target repeat protein [Roseobacter sp. SK209-2-6]
Length = 378
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 60/192 (31%), Gaps = 13/192 (6%)
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
Y + ++ G+D L D L G + + + ++ G+ T
Sbjct: 137 YGGDDSIDGGEGRDVLHGGEGNDTLLGTVGDDLLHGEEGSDVLSGGDDEDTLFGHFGADT 196
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ +S G +D+++G S + + +D G SG DT + +
Sbjct: 197 LLGGEGNDSAHGGQDDDLLMGGSGADALHGNDDDDTLTGGSGEDTL-FGGTGNDFIWGAE 255
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
E A Y D L FA + + + + E+ V D
Sbjct: 256 EEAEQDYLNGGEGDDTL-------FAGEGDVVTAGEGADQIWFEDQGENGQAVELVDFNS 308
Query: 382 SMKHFYEFGLSE 393
+ H F E
Sbjct: 309 AEDHLVVFWSPE 320
Score = 40.9 bits (94), Expect = 0.69, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 34/165 (20%), Gaps = 12/165 (7%)
Query: 331 NEHKQDFLSDV---ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
D L E + + ++ + L G D
Sbjct: 109 GSDGADTLVGTGEGEEISADSGNDQAHGYGGDDSIDGGEGRDVLHGGEGNDTLLGTVGDD 168
Query: 388 EFGLSEGRDI-----TFDSYLYLGSYDDLRNVFGSDRGAAARH----YITHGVKEGRNPD 438
EG D+ D+ D L G+D + G D
Sbjct: 169 LLHGEEGSDVLSGGDDEDTLFGHFGADTLLGGEGNDSAHGGQDDDLLMGGSGADALHGND 228
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTF 483
L + + L + + EG F
Sbjct: 229 DDDTLTGGSGEDTLFGGTGNDFIWGAEEEAEQDYLNGGEGDDTLF 273
Score = 38.6 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 13/143 (9%), Positives = 32/143 (22%)
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
+D V + + + + G D + + EG D +
Sbjct: 108 EGSDGADTLVGTGEGEEISADSGNDQAHGYGGDDSIDGGEGRDVLHGGEGNDTLLGTVGD 167
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
+ + + S + G + + + L+
Sbjct: 168 DLLHGEEGSDVLSGGDDEDTLFGHFGADTLLGGEGNDSAHGGQDDDLLMGGSGADALHGN 227
Query: 465 VGKDHFSNFGCEEGRFVTFDSYL 487
D + E+ F +
Sbjct: 228 DDDDTLTGGSGEDTLFGGTGNDF 250
>gi|239833735|ref|ZP_04682063.1| hemolysin-type calcium-binding region [Ochrobactrum intermedium LMG
3301]
gi|239821798|gb|EEQ93367.1| hemolysin-type calcium-binding region [Ochrobactrum intermedium LMG
3301]
Length = 231
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 4/126 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
++ G+D L G N I E + G + +
Sbjct: 48 GNDTVFGGNGNDILFGGTGNDTL----FGENGNDILFGNEGNDVLSGGNGSDVLYGGNGD 103
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ + G +G+D++ G + N++ + +GND+ DG +G D S + ++
Sbjct: 104 DILQGGNGSDLLYGGAHNDILYGGNGNDILDGGAGNDVLIGGNGSDTFLFNGGGGNDVIL 163
Query: 329 DANEHK 334
D N +
Sbjct: 164 DFNPGE 169
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 50/173 (28%), Gaps = 39/173 (22%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
D + + + + ++ G N + T +++ G +GND++ GN N+V
Sbjct: 30 FDDFIRAHGGDDLVFGGDGNDTVFGGNGNDILFGGTGNDTLFGENGNDILFGNEGNDVLS 89
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+G+DV G +G D L+ +
Sbjct: 90 GGNGSDVLYGGNGDD-------------------------------------ILQGGNGS 112
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE--FGLSEGRDITFDS 401
IL + L G DV F G D+ D
Sbjct: 113 DLLYGGAHNDILYGGNGNDILDGGAGNDVLIGGNGSDTFLFNGGGGNDVILDF 165
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 51/184 (27%), Gaps = 32/184 (17%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
++ G + +DV+ G+ ++ G+D+ G G DT F + ++ ++
Sbjct: 15 TLEGGAYDDVLFGSRFDDFIRAHGGDDLVFGGDGNDTVF--GGNGNDILFGGTGNDTLF- 71
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
IL + L G DV
Sbjct: 72 -------------------------GENGNDILFGNEGNDVLSGGNGSDVLYGGNGDDIL 106
Query: 390 GLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
G D+ + + LY G+ +D+ + + + + G +
Sbjct: 107 QGGNGSDLLYGGAHNDILYGGNGNDILDGGAGNDVLIGGNGSDTFLFNGGGGNDVILDFN 166
Query: 446 IASH 449
Sbjct: 167 PGED 170
Score = 39.0 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 29/133 (21%), Gaps = 9/133 (6%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+R + + L G D +EG D+
Sbjct: 33 FIRAHGGDDLVFGGDGNDTVFGGNGNDILFGGTGNDTLFGENGNDILFGNEGNDVL---- 88
Query: 403 LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDL 462
G+ D+ D +G L ++ L + +
Sbjct: 89 -SGGNGSDVLYGGNGDDILQ----GGNGSDLLYGGAHNDILYGGNGNDILDGGAGNDVLI 143
Query: 463 VQVGKDHFSNFGC 475
G D F G
Sbjct: 144 GGNGSDTFLFNGG 156
>gi|126327132|ref|XP_001366571.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 246
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 63/188 (33%), Gaps = 46/188 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKF 81
W + + Y+ T+ + + +L ALG+WS+V LTF++ +DI+
Sbjct: 89 WPSNVVTYRIVSYTSDLPRYKVDQL-------VEQALGKWSEVSALTFKKVLIGDADIRI 141
Query: 82 ISSNNGYVCTPRYDS-------------RYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + +D + +FD + W G G A HE+
Sbjct: 142 GFARGAHGDFYPFDGPGGILAHAFEPGIGIGGDAHFDNDEQWSDGSQLGVNFLFAATHEL 201
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H N ++ + + DI
Sbjct: 202 GHSLGLGHSSDPNAVMYPTYDASNSGDIN-------------------------LSEDDI 236
Query: 189 VAVQKIYG 196
+Q +YG
Sbjct: 237 KGIQALYG 244
>gi|124267066|ref|YP_001021070.1| hypothetical protein Mpe_A1877 [Methylibium petroleiphilum PM1]
gi|124259841|gb|ABM94835.1| hypothetical protein Mpe_A1877 [Methylibium petroleiphilum PM1]
Length = 1699
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 3/182 (1%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP-MVSDIVAVQKIYGA 197
+ + D + T ++ ++ D + G+ T D + + +
Sbjct: 1400 DIAVANDGDPIKLNVTADHYTTLSVAGLNAGMTLTDGTPGHAVTAAGTDDTIDLTGWNLS 1459
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL--IGGVKNYIDLNTESWSSIGG 255
G +E ++ ++ + +++D T GG N T + + G
Sbjct: 1460 NLSVTGAGSALLEFTATNTVADESRSSTQYMNIVDGTSLLAGGAGNDTLNGTANADLLIG 1519
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N T+ + ++G +GND + G + ++V +G+D+ G +G DTF +
Sbjct: 1520 NGGNDTLNGGGGNDRLIGGAGNDTLNGAAGHDVLQGGAGDDLLTGGAGSDTFAWSLADRG 1579
Query: 316 YK 317
Sbjct: 1580 AS 1581
Score = 47.9 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 29/232 (12%), Positives = 59/232 (25%), Gaps = 6/232 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN--NVFFESSGNDVFDGSSGLDTFFY 309
S+ G MT+ T +V + +D + N N+ +G+ + + ++
Sbjct: 1423 SVAGLNAGMTLTDGTPGHAVTAAGTDDTIDLTGWNLSNLSVTGAGSALLEFTATNTVADE 1482
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
S Y +++ A + ++ + L L A +
Sbjct: 1483 SRSSTQYMNIVDGTSLLAGGAGNDTLNGTANADLLIGNGGNDTLNGGGGNDRLIGGAGND 1542
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDI----TFDSYLYLGSYDDLRNVFGSDRGAAARH 425
L G DV + G D D D F +A
Sbjct: 1543 TLNGAAGHDVLQGGAGDDLLTGGAGSDTFAWSLADRGASGAPARDTIADFNVAPVSAGGD 1602
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ + S+ D + ++ + G
Sbjct: 1603 SLDLRDLLVGANHVGTDPGNLESYLDFDTSSTPGSTIIHISSSGGFANGAYS 1654
>gi|302342424|ref|YP_003806953.1| glycosyl transferase group 1 [Desulfarculus baarsii DSM 2075]
gi|301639037|gb|ADK84359.1| glycosyl transferase group 1 [Desulfarculus baarsii DSM 2075]
Length = 609
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 54/155 (34%), Gaps = 23/155 (14%)
Query: 422 AARHYITHGV-KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE--G 478
A RH++ G +E F A Y D A P H+ G +E
Sbjct: 22 AWRHWLLAGHKREIALNPLFDAEYYRQVWADKEPRIASEP----SAFMHWLKHGLQERII 77
Query: 479 RFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 537
V FD YL +Y D+ + H+I GV E R P+ F + Y+ + D
Sbjct: 78 PTVLFDEKFYLHAYPDVVACG----MWSFEHFIRFGVNERRWPNGLFSSGRYMEKNND-- 131
Query: 538 NAFADAPDLVQAGKDHFSNFG---YEEGRSITFNP 569
A HF +G G + F+P
Sbjct: 132 ------NLNGLAPYYHFLMYGDDCGFNGDTHNFDP 160
Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 43/124 (34%), Gaps = 14/124 (11%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
F Y + V A RH++ G K + F A Y D A
Sbjct: 2 FIPQYYKLQAGLDQAVT---DEQAWRHWLLAGHKREIALNPLFDAEYYRQVWADKEPRIA 58
Query: 542 DAPDLVQAGKDHFSNFGYEEG--RSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGM 599
P + H+ G +E ++ F+ YL +Y D+ + +H+I G+
Sbjct: 59 SEP----SAFMHWLKHGLQERIIPTVLFDEKFYLHAYPDVVAC----GMWSFEHFIRFGV 110
Query: 600 KEGR 603
E R
Sbjct: 111 NERR 114
>gi|300722358|ref|YP_003711644.1| toxin RtxA [Xenorhabdus nematophila ATCC 19061]
gi|297628861|emb|CBJ89444.1| toxin RtxA [Xenorhabdus nematophila ATCC 19061]
Length = 4970
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 62/224 (27%), Gaps = 18/224 (8%)
Query: 228 DDLLDL---TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
D D + I+++ +++ G + A + G G+DV
Sbjct: 4589 DKTFDFLRNSGHLKGNGDINVSLGNYNFNWGGDGKDLGAYLGENNNFWGGRGDDVFYSVG 4648
Query: 285 ANNVFFESSGNDV---------FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+N+F +GND G +G D A Y + +
Sbjct: 4649 TSNIFTGGAGNDTGVMMGRENMMFGGAGNDVAVL-AGRINYAYMGEGDDQVFAFGEGGMI 4707
Query: 336 DFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR 395
D + + + + + + + + G D ++ + G
Sbjct: 4708 DAGKGRDYIVASGNFNRIEAGEDQDYVVTIGNNNQVDLGEGNDFARVFGNYNRIDGNTGN 4767
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ + L Y + N + A +G + D
Sbjct: 4768 N-----SIKLMGYHAMINGGTGNDHLIADVVSKFSQFDGGDGDD 4806
Score = 39.8 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 50/383 (13%), Positives = 102/383 (26%), Gaps = 40/383 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDS-----RYFMEINFDKADVWRYGIGKGTILSHNALHEIG 129
+ DI N + + D Y +G I + A ++ G
Sbjct: 4603 GNGDINVSLGNYNFNWGGDGKDLGAYLGENNNFWGGRGDDVFYSVGTSNIFTGGAGNDTG 4662
Query: 130 HALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIV 189
+G N + G D + M Q A IV
Sbjct: 4663 VMMG-----RENMMFGGAGNDVAVLAGRINYAYMGEGDDQVFAFGEGGMIDAGKGRDYIV 4717
Query: 190 AVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTES 249
A G + + I + D G + D + G N ID NT +
Sbjct: 4718 ASGNFNRIEAGEDQDYVVTIGNNNQ--------VDLGEGN--DFARVFGNYNRIDGNTGN 4767
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGS--SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
S I + I T + ++ S G +++ + F G +G++++
Sbjct: 4768 NS-IKLMGYHAMINGGTGNDHLIADVVSKFSQFDGGDGDDLLVLGGYQNSFKGGTGVNSY 4826
Query: 308 FYYAPSYLYKIYRFENAIIVYDA---------NEHKQDFL----SDVERLRFADQCIDSV 354
+ + + D + +V+ Q
Sbjct: 4827 VVSGDVIDNVVEDIKQGDKIIFNDINWQNLWFQRSGYDLVLSTHRNVKDSSAQGQFEAMG 4886
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV 414
+V + + + D+I +G + + + + + + + D +
Sbjct: 4887 SVTFNN--YFNGNRADIITQMGDKDAQGEREYTALSANGVDSLVQAMSGFAPNMGD--SG 4942
Query: 415 FGSDRGAAARHYITHGVKEGRNP 437
F + + I + N
Sbjct: 4943 FIDSLDSQTKSTIVTAWSDTTNG 4965
>gi|150377177|ref|YP_001313772.1| hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
gi|150031724|gb|ABR63839.1| Hemolysin-type calcium-binding region [Sinorhizobium medicae
WSM419]
Length = 396
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 87/291 (29%), Gaps = 13/291 (4%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDL-----TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ I+ + GDD LD TL GG+ + G + N +
Sbjct: 19 DTLRGYDGNDVIWGNAGDDYLDGGLGNDTLYGGLGDDFFKVGGGDDYAEGGDGNDSFDGG 78
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKI 318
++++G GND+ G N++ G+D G +G D + A I
Sbjct: 79 AGADTLIGGLGNDIFSGEDGNDIIDGGDGHDHILGGAGNDEIYGGAGEEYIDAGLGDDII 138
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
Y + + L+ + + + L+ + ++ + IG D
Sbjct: 139 YAGSGNDGFNNRIDPATGKLTQ-QAVGGGAGNDTIYGEEGSDALKGQSGHDRVYGGIGDD 197
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ + +G D+ + + N + G Y G
Sbjct: 198 IVDGGDGNNYLDGGDGNDVLDSEGGIDEARGGIGNDRIAVGGGNDLAYGDAGDDILSGAA 257
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYL 489
L+ ++ + + GKD + + D+ ++
Sbjct: 258 GDDILDGGLGNDLVTAGDGNDTLRGDAGKDTLLAEAGSDILWGGADADRFV 308
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/316 (12%), Positives = 82/316 (25%), Gaps = 8/316 (2%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
+I G + + +++ G GNDV+ GN+ ++ GND G G D FF
Sbjct: 2 NINGTSVANKLIGTNLADTLRGYDGNDVIWGNAGDDYLDGGLGNDTLYGGLGDD-FFKVG 60
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
Y N A + D + A +++
Sbjct: 61 GGDDYAEGGDGNDSFDGGAGADTLIGGLGNDIFSGEDGNDIIDGGDGHDHILGGAGNDEI 120
Query: 372 IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 431
G++ ++ G D F++ + + + G G Y G
Sbjct: 121 YGGAGEEYIDAGLGDDIIYAGSGND-GFNNRIDPATGKLTQQAVGGGAGNDTI-YGEEGS 178
Query: 432 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS 491
+ + + + + G D + G + +
Sbjct: 179 DALKGQSGHDRVYGGIGDDIVDGGDGNNYLDGGDGNDVLDSEGGIDEARGGIGNDRIAVG 238
Query: 492 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGK 551
+ + + G + ++ L L +AG
Sbjct: 239 GGNDLAYGDAGDDILS---GAAGDDILDGGLGNDLVTAGDGNDTLRGDAGKDTLLAEAGS 295
Query: 552 DHFSNFGYEEGRSITF 567
D +G + F
Sbjct: 296 D--ILWGGADADRFVF 309
Score = 41.7 bits (96), Expect = 0.39, Method: Composition-based stats.
Identities = 50/385 (12%), Positives = 88/385 (22%), Gaps = 11/385 (2%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T R + D G+G T+ G + +G G
Sbjct: 18 ADTLRGYDGNDVIWGNAGDDYLDGGLGNDTLYGGLGDDFFKVGGGDDYAEGGDGNDSFDG 77
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
L + + + ++D G+ + + G G
Sbjct: 78 GAGADTLIGGLGNDIFSGEDGNDIIDGGDGHDHILGGAGNDEIYGGAGEEYIDAGLGDDI 137
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
I + F I + G G + I E ++ G + +
Sbjct: 138 IYAGSGNDGFNNRIDPATGKLTQQAVGGGAGNDTI-YGEEGSDALKGQSGHDRVYGGIGD 196
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ V G GN+ + G N+V G D G G D + L
Sbjct: 197 DIVDGGDGNNYLDGGDGNDVLDSEGGIDEARGGIGNDRIAVGGGNDLAYG---------- 246
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYE 388
DA + + + L L A + L+ G D+
Sbjct: 247 DAGDDILSGAAGDDILDGGLGNDLVTAGDGNDTLRGDAGKDTLLAEAGSDILWGGADADR 306
Query: 389 FGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 448
F + + V + G N + +
Sbjct: 307 FVFKGAGSLVGRDSVMDFQNGVDLFVLENLGIKQYSSSGAAGTIYAYNDASGAVMLKGYD 366
Query: 449 HEDLINAFADAPDLVQVGKDHFSNF 473
+ HFS+
Sbjct: 367 SAGNAVTIHVDDPANSLAASHFSSA 391
>gi|329851390|ref|ZP_08266147.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328840236|gb|EGF89808.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 930
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 55/400 (13%), Positives = 95/400 (23%), Gaps = 43/400 (10%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI------------GGVKNYIDLN 246
G G++ Y ++ DSGG DL++ ++ GG N
Sbjct: 501 NGGAGDDTYSVDNVGDTVSETTLGSDSGGYDLVNASVTYTLADYVEALTLGGYVNTDGTG 560
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
S + I G + + + GS+GND + G N+ + D G G DT
Sbjct: 561 NASDNVINGSYYVNVLNGLGGKDRIFGSNGNDTLNGGDGNDYLDGGADVDSMIGGLGDDT 620
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F + E V + + I+ +++
Sbjct: 621 FIITQVGDIAVEAAGEGKDTVLSSITYSLVGQVIENLTLTGSSTINGTGNGVGNVIIGNY 680
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
L G D + G G+D ++ +
Sbjct: 681 YNNVLNGGAGADTLIGGNGNDTY-----------VVDVAGDIVTEAPAQGTDTVESSITW 729
Query: 427 ITHGVKEGRNPDAF--KALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFD 484
E A + + G D + + +
Sbjct: 730 TLKTNLENLTLTGAVNINGTGNAGNNVITGNSGTNALSGGAGNDSYYIQNTTDTISESTG 789
Query: 485 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA--FKALEYIASHEDLINAFAD 542
+ G+D ++ Y G E + LI D
Sbjct: 790 N--------------GTDIIYSSVSYTLFGAVETLALTGATNIDATGNSLVNTLIGNDGD 835
Query: 543 APDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNV 582
+ G D F G + F D
Sbjct: 836 NVLNGKGGADTF--TGGLGSDTFFFQTSSGADRITDFNAA 873
Score = 50.6 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 44/308 (14%), Positives = 83/308 (26%), Gaps = 41/308 (13%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
E ++ + NG + + AD G G T + A +
Sbjct: 655 ENLTLTGSSTINGTGNGVGNVIIGNYYNNVLNGGAGADTLIGGNGNDTYVVDVAGDIVTE 714
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
A G + + L ++ +
Sbjct: 715 A--------PAQGTDTVESSITWTLKTNLENLTLTGAVNING------------------ 748
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
G+ GNN+ + D + +
Sbjct: 749 --------TGNAGNNVITGNSGTNALSGGAGNDSYYIQNTTDTISESTGNGTDIIYSSVS 800
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G + + + T I+ G+S + +IGN +NV G D F G G DTFF+
Sbjct: 801 YTLFGAVETLALTGATNID-ATGNSLVNTLIGNDGDNVLNGKGGADTFTGGLGSDTFFFQ 859
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYED 370
S +I F A + + + + D +++ A+
Sbjct: 860 TSSGADRITDFNAAQNDWINVNAYSGGVVNGGGVTITDA------GGGNTLITMGANNIT 913
Query: 371 LIQVIGQD 378
++ V D
Sbjct: 914 VLGVAYND 921
>gi|307592277|ref|YP_003899868.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
gi|306985922|gb|ADN17802.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
Length = 301
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 11/135 (8%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI----- 253
G GN+IY +GG D LD T G N I+L S ++
Sbjct: 53 SGGNGNDIYFFNASSSLGSDTIIETTTGGIDTLDFTGTTGNVN-INLGISSTQTVVSSAE 111
Query: 254 ---GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ +T++ V+E+++G S D +IGNS NN +GND G G D+
Sbjct: 112 LVPHPNQLQLTLSAGNVLENLLGGSSEDCLIGNSLNNTITGGAGNDTLLGGGGNDSLI-- 169
Query: 311 APSYLYKIYRFENAI 325
+ +
Sbjct: 170 EGAGNDILTGGTGND 184
>gi|1705991|sp|Q10835|MMP13_XENLA RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; Flags: Precursor
gi|1129121|gb|AAA83996.1| collagenase 3 [Xenopus laevis]
Length = 469
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 42/149 (28%), Gaps = 21/149 (14%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R W + Y+ T + ++ + AL WS V L F + +
Sbjct: 107 RKLKWPRNNLTYRIVNYTPDLSTSEVD-------RAIKKALKVWSDVTPLNFTRLRTGTA 159
Query: 78 DIKFISSNNGYV-CTPRYDSRYF-----------MEINFDKADVWRYGIGKGTILSHNAL 125
DI + P D KG L A
Sbjct: 160 DIMVSFGKKEHGDYYPFDGPDGLLAHAFPPGEKLGGDTHFDDDEMFSTDNKGYNLFVVAA 219
Query: 126 HEIGHALGLMHPGS-YNGGYPVYGVDNDY 153
HE GHALGL H + +PVY
Sbjct: 220 HEFGHALGLDHSRDPGSLMFPVYTYTETS 248
>gi|301773300|ref|XP_002922062.1| PREDICTED: collagenase 3-like [Ailuropoda melanoleuca]
Length = 470
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 48/161 (29%), Gaps = 27/161 (16%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ R A WS V L F +
Sbjct: 108 RTLKWSKTNLTYRIVNYTPDLTHSEV-------EKAFRKAFKVWSDVTPLNFTRLHEGTA 160
Query: 78 DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
DI + P Y + +FD + W KG L
Sbjct: 161 DIMISFGTKDHGDFYPFDGPSGLLAHAFPP--GPNYGGDAHFDDDETWT-SSSKGYNLFL 217
Query: 123 NALHEIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSV 162
A HE GH+LGL H +P+Y V
Sbjct: 218 VAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPEDDV 258
>gi|268609912|ref|ZP_06143639.1| outer membrane adhesin like proteiin [Ruminococcus flavefaciens FD-1]
Length = 1963
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/376 (12%), Positives = 87/376 (23%), Gaps = 61/376 (16%)
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
S G + T +++G+ +D + G + N+ GNDV G G DT+ +
Sbjct: 982 SGSGKFGDYNSGYGTRDTTLIGADTDDTISGYNGNDTLIGGQGNDVLYGGYGNDTYIFNL 1041
Query: 312 PSYLYKIYR------------------------FENAIIVYDANEHK---------QDFL 338
I + +V + D
Sbjct: 1042 GDGADTINEDNSNSAADRIVFGEGITAEDIKVIRDGNDMVINIGTEGDSIRLVKQYNDSW 1101
Query: 339 SDVERLRFADQ-------------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKH 385
VE FA+ I V + Y + LI D
Sbjct: 1102 YRVENFEFANGKKLTADDLYTAAQTIHGSGVIKDYTSGYGSRDATLIGDKTDDTIYGYSG 1161
Query: 386 FYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
EG D+ + + D + + +AA + + +
Sbjct: 1162 DDTLIGGEGNDVLYGGYGNDTYIFNKGDGADTINEDNSNSAADRIVFGEGITAEDIKVIR 1221
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGS---YDDLRNV 498
+ + NF G +T D + N
Sbjct: 1222 DGNDMVLNIGTEGDSIRLVKQYNDSWYRVENFEFANGEKLTADDLYTAAQTIHGSGVIND 1281
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
+ S G+ I + + LI + G D +
Sbjct: 1282 YTSGYGSRDATLIGDKTD--------DTIYGYNGDDTLIGGQGNDVLYGGYGNDTYIFNL 1333
Query: 559 YEEGRSITFNPDLYLT 574
+ +I +
Sbjct: 1334 GDGADTINEDNSNSAA 1349
Score = 61.3 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 51/400 (12%), Positives = 91/400 (22%), Gaps = 67/400 (16%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ + G K+ T + +++G +D + G + ++
Sbjct: 1399 FEFANGKKLTADDLYTAAQTIHGSGVIKDYTSGYGSRDATLIGDKTDDTIYGYNGDDTLI 1458
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII-------------VYDANEHKQDF 337
GNDV G G DT+ Y I + I D
Sbjct: 1459 GGQGNDVLYGGYGNDTYIYNKGDGADTINEDNSNSIADRIVFGEGISANDITVTRDGDDM 1518
Query: 338 LSDV--------------------ERLRFADQCI----------------------DSVN 355
+ ++ E FAD I +S
Sbjct: 1519 VLNIGTEGDSIRLVRQYNDSWYRVENFEFADGEIVKADDFYNQSLTISGSGKFGDYNSGY 1578
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ + L + + + G D + G D LG D N
Sbjct: 1579 GTRDTTLIGADTDDTISGYNGNDTLIGGQGNDVLYGGYGNDTYI---FNLGDGADTINED 1635
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
S+ A + + + + + NF
Sbjct: 1636 NSNSAADRVVFGEGITADDITVTRDGNDMILLVGDKGDSLRI--TRQYNDSWYRVENFEF 1693
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGS-DRGAAARHYITHGVKEGRNPDAFKALEYIASHE 534
G VT D FG + G R G D + ++
Sbjct: 1694 ANGDVVTADQLYDQSLTISGSGEFGDFNSGYGTRDTTLIGA------DTDDTISGYNGND 1747
Query: 535 DLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLT 574
+I + G D + + +I +
Sbjct: 1748 TIIGGKGEDVLYGGYGNDTYIFNIGDGADTINEDNANSAA 1787
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 57/426 (13%), Positives = 98/426 (23%), Gaps = 75/426 (17%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
+ + N + G K+ T + +++G +D + G + ++
Sbjct: 815 FEFANGKKLTADDLYNKGLTITGSGEIKDHTSGYGSRDTTLIGDKTDDTIYGYNGDDTLI 874
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYR------------------------FENAII 326
GNDV G DT+ Y I + +
Sbjct: 875 GGQGNDVLYGGYDNDTYIYNKGDGADTINEDNSNSIADRIVFGEGISANDITVTRDGNDM 934
Query: 327 VYDANEHK---------QDFLSDVERLRFADQCI----------------------DSVN 355
V + D VE FAD I +S
Sbjct: 935 VLLIGDKGDNIRIVKQYNDSWYRVENFEFADGEIIKADDFYDQSLTISGSGKFGDYNSGY 994
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
+ + L + + + G D + G D LG D N
Sbjct: 995 GTRDTTLIGADTDDTISGYNGNDTLIGGQGNDVLYGGYGNDTYI---FNLGDGADTINED 1051
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
S+ A + E I + NF
Sbjct: 1052 NSNSAADRIVFGEGITAEDIKVIRDGNDMVI--NIGTEGDSIRLVKQYNDSWYRVENFEF 1109
Query: 476 EEGRFVTFDSYLYLGS---YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIAS 532
G+ +T D + + S G+ I + +
Sbjct: 1110 ANGKKLTADDLYTAAQTIHGSGVIKDYTSGYGSRDATLIGDKTD--------DTIYGYSG 1161
Query: 533 HEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQ 592
+ LI + G D + + +I + VFG +A
Sbjct: 1162 DDTLIGGEGNDVLYGGYGNDTYIFNKGDGADTINEDNSNSAAD----RIVFGEGITAEDI 1217
Query: 593 HYITHG 598
I G
Sbjct: 1218 KVIRDG 1223
Score = 60.6 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 63/400 (15%), Positives = 108/400 (27%), Gaps = 63/400 (15%)
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
+ + G E+N + E + G G+D + G + N+ F GND G G D + +
Sbjct: 689 TVVLGSEENDELTGTAGREIIFGDLGDDTIHGGAGNDTLFGGKGNDTLYGGYGNDKYIFN 748
Query: 311 APSYLYKIYR------------------------FENAIIVYDANEHK---------QDF 337
A I E ++ + D
Sbjct: 749 AGDGSDIINEDNSNSAADSIVFGAGIEPDDIKVIREGNDMILNIGTEGDSIRLVKQYNDS 808
Query: 338 LSDVERLRFADQ-------------CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
VE FA+ I + Y + LI D
Sbjct: 809 WYRVENFEFANGKKLTADDLYNKGLTITGSGEIKDHTSGYGSRDTTLIGDKTDDTIYGYN 868
Query: 385 HFYEFGLSEGRDIT---FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
+G D+ +D+ Y+ + D + D + I G EG + +
Sbjct: 869 GDDTLIGGQGNDVLYGGYDNDTYIYNKGDGADTINEDNSNSIADRIVFG--EGISANDIT 926
Query: 442 ALEYIASHEDLINAFADAPDLVQVGKDHFS---NFGCEEGRFVTFDSYLYLGSYDDLRNV 498
LI D +V+ D + NF +G + D Y S +
Sbjct: 927 VTRDGNDMVLLIGDKGDNIRIVKQYNDSWYRVENFEFADGEIIKADD-FYDQSLTISGSG 985
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
D + T + + + ++ LI + G D +
Sbjct: 986 KFGDYNSGYGTRDTTLIGADTD----DTISGYNGNDTLIGGQGNDVLYGGYGNDTYIFNL 1041
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ +I + VFG +A I G
Sbjct: 1042 GDGADTINEDNSNSAAD----RIVFGEGITAEDIKVIRDG 1077
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 64/564 (11%), Positives = 122/564 (21%), Gaps = 107/564 (18%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ S Y +R I D D G T++ + G
Sbjct: 975 YDQSLTISGSGKFGDYNSGYGTRDTTLIGADTDDTISGYNGNDTLIGGQGNDVLYGGYG- 1033
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G D E++S + F + D MV +I
Sbjct: 1034 ---NDTYIFNLGDGADTINEDNSNSAADRIVFGEGITAEDIKVIRDGNDMVINI------ 1084
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G+ G++I ++ ++ + G L L +
Sbjct: 1085 -----GTEGDSIRLVKQYNDSWYRVENFEFANGKKLTADDLYTAAQTI---------HGS 1130
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G K+ T + +++G +D + G S ++ GNDV G G DT+ +
Sbjct: 1131 GVIKDYTSGYGSRDATLIGDKTDDTIYGYSGDDTLIGGEGNDVLYGGYGNDTYIFNKGDG 1190
Query: 315 LYKIYR------------------------FENAIIVYDANEHK---------QDFLSDV 341
I + +V + D V
Sbjct: 1191 ADTINEDNSNSAADRIVFGEGITAEDIKVIRDGNDMVLNIGTEGDSIRLVKQYNDSWYRV 1250
Query: 342 ERLRFADQ-------------------------------CIDSVNVKQRSILEYTASYED 370
E FA+ + K + +
Sbjct: 1251 ENFEFANGEKLTADDLYTAAQTIHGSGVINDYTSGYGSRDATLIGDKTDDTIYGYNGDDT 1310
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
LI G DV + + G + S D +
Sbjct: 1311 LIGGQGNDVLYGGYGNDTYIFNLGDGADTINEDNSNSAADRIVFGEGIGPDDIKVIRDGD 1370
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
++ + + D + + + + Y
Sbjct: 1371 DMVLNIGTEGDSIRLVRQYNDSWYRVENFEFANGKKLTADDLYTAAQTIHGSGVIKDYTS 1430
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
Y D+ + + LI + G
Sbjct: 1431 GYGSRDATLIGDKTD-------------------DTIYGYNGDDTLIGGQGNDVLYGGYG 1471
Query: 551 KDHFSNFGYEEGRSITFNPDLYLT 574
D + + +I + +
Sbjct: 1472 NDTYIYNKGDGADTINEDNSNSIA 1495
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 83/297 (27%), Gaps = 24/297 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ + S Y +R I D D G T++ +
Sbjct: 1559 YNQSLTISGSGKFGDYNSGYGTRDTTLIGADTDDTISGYNGNDTLIGGQGNDVLY----- 1613
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G Y ++ + + + + S + + T +D++ +
Sbjct: 1614 ---GGYGNDTYIFNLGDGADTINEDNSNSAADRVVFGEGITADDITVTRDGNDMILLVGD 1670
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G + +I Q DS + ++ D++ + I S
Sbjct: 1671 KG--------DSLRITRQYNDSWYRVENFEFANGDVVTADQLYDQSLTI--------SGS 1714
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
G + T +++G+ +D + G + N+ G DV G G DT+ +
Sbjct: 1715 GEFGDFNSGYGTRDTTLIGADTDDTISGYNGNDTIIGGKGEDVLYGGYGNDTYIFNIGDG 1774
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL 371
I K D+ + + + V K SI +
Sbjct: 1775 ADTINEDNANSAADRIVFGKGITAEDITVTKDGNDMVLLVGDKGDSIRLVRQYNDSW 1831
>gi|148643381|ref|YP_001273894.1| glycosyl transferase [Methanobrevibacter smithii ATCC 35061]
gi|148552398|gb|ABQ87526.1| predicted glycosyltransferase, GT2 family [Methanobrevibacter
smithii ATCC 35061]
Length = 533
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 18/104 (17%)
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D A ++Y +G E F Y +++D+ G H+ GY E
Sbjct: 15 DFRKAMKNYKYYGAIE--ESGLFDEKFYSKTYDDVKG----------DGLTHYLVKGYLE 62
Query: 562 GR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
GR S+ F+PD Y +Y D+ + HYI HG EG+
Sbjct: 63 GRLPSLDFDPDFYNNNYPDVHRA----QLNPLLHYIAHGKDEGK 102
Score = 51.7 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 16/101 (15%)
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AF 524
++ +G E FD Y +YDD++ G HY+ G EGR P F
Sbjct: 19 AMKNYKYYGAIE-ESGLFDEKFYSKTYDDVK-------GDGLTHYLVKGYLEGRLPSLDF 70
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
Y ++ D+ A + H+ G +EG+
Sbjct: 71 DPDFYNNNYPDVHRAQLNPLL-------HYIAHGKDEGKIF 104
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 18/103 (17%)
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D A ++Y +G E F Y +++D+ G H+ G E
Sbjct: 15 DFRKAMKNYKYYGAIE--ESGLFDEKFYSKTYDDV----------KGDGLTHYLVKGYLE 62
Query: 478 GRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
GR FD Y +Y D+ + HYI HG EG
Sbjct: 63 GRLPSLDFDPDFYNNNYPDVHRAQLN----PLLHYIAHGKDEG 101
Score = 40.5 bits (93), Expect = 0.83, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 14/83 (16%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLR 412
+ Y+ +Y+D+ + + H+ G EGR + FD Y +Y D+
Sbjct: 32 SGLFDEKF-YSKTYDDVKG-------DGLTHYLVKGYLEGRLPSLDFDPDFYNNNYPDVH 83
Query: 413 NVFGSDRGAAARHYITHGVKEGR 435
+ HYI HG EG+
Sbjct: 84 RA----QLNPLLHYIAHGKDEGK 102
>gi|321462024|gb|EFX73051.1| matrix metalloproteinase 1 [Daphnia pulex]
Length = 1050
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 67/197 (34%), Gaps = 49/197 (24%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIH 76
++ W+ + Y T E + +E+A+ A W +V LTF + +
Sbjct: 125 IKGNRWTKDELTYGISKYTPDL------EKSIVDREIAK-AFQLWEEVTPLTFTFVETGN 177
Query: 77 SDIKFISSNNGYVCT---PRYDSRYF----------MEINFDKADVWRYGIGKGTILSHN 123
DI+ G+ + P ++ + FD+A+ W GT L
Sbjct: 178 VDIEIRFQYGGHSDSKDDPTFEGPGGILGYAFFPKSGDTYFDEAETWTTN-SSGTNLFQV 236
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A HE GH+LGL H + + S+ Y D
Sbjct: 237 ATHEFGHSLGLEH---------------SESKMAVMYSLYDYRPDFKLETD--------- 272
Query: 184 MVSDIVAVQKIYGAPKG 200
DI +Q++YGA
Sbjct: 273 ---DINRIQELYGAKNS 286
>gi|323960865|gb|EGB56485.1| hypothetical protein ERGG_02645 [Escherichia coli H489]
Length = 337
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 13/88 (14%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSIT--FNPDLYLTSYD 577
N F Y ++ ++ + +H+ G++ G + + F+ + YL Y
Sbjct: 261 NSGLFSIDWYRKNYPEIDEY-------SISPIEHYLTIGFKLGLTPSERFDGNDYLARYP 313
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRAL 605
D+ + HY+ G EGR
Sbjct: 314 DVQQ----EGVNPLLHYLMFGKNEGRTF 337
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 12/84 (14%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFA 541
F Y +Y ++ + HY+T G K G P F +Y+A + D+
Sbjct: 265 FSIDWYRKNYPEIDEY----SISPIEHYLTIGFKLGLTPSERFDGNDYLARYPDVQQE-G 319
Query: 542 DAPDLVQAGKDHFSNFGYEEGRSI 565
P L H+ FG EGR+
Sbjct: 320 VNPLL------HYLMFGKNEGRTF 337
Score = 46.7 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 12/87 (13%)
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLI 453
F Y +Y ++ + HY+T G K G P F +Y+A + D+
Sbjct: 261 NSGLFSIDWYRKNYPEI----DEYSISPIEHYLTIGFKLGLTPSERFDGNDYLARYPDVQ 316
Query: 454 NAFADAPDLVQVGKDHFSNFGCEEGRF 480
+ H+ FG EGR
Sbjct: 317 QEGVNPLL-------HYLMFGKNEGRT 336
>gi|113477138|ref|YP_723199.1| hemolysin-type calcium-binding protein [Trichodesmium erythraeum
IMS101]
gi|110168186|gb|ABG52726.1| Hemolysin-type calcium-binding region [Trichodesmium erythraeum
IMS101]
Length = 678
Score = 62.1 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 66/186 (35%), Gaps = 4/186 (2%)
Query: 147 YGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNI 206
G D+ +F + + + + SD + +IYG G+
Sbjct: 452 TGSDDFGGGITFEVGESVFEPGITPKVPVTLEWNTFSEASDQAGISRIYGGIHFEDGD-- 509
Query: 207 YKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+ + + +++ + T+I + + + + I + + +
Sbjct: 510 --LNGRALGREVAEHVWEKTQGVITPNTIIATNEKDNLIGSVTNDLIYSNRSDDIVFGNE 567
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G GND+V G + ++ + G+D+ G G D F + + I FE+ I
Sbjct: 568 GNDMLCGGKGNDIVNGGAGADLIYGDFGDDILIGGVGGDNFHFRSNDGNNIITDFEDGID 627
Query: 327 VYDANE 332
V +
Sbjct: 628 VIGLGD 633
>gi|310817253|ref|YP_003965217.1| type I secretion target repeat protein [Ketogulonicigenium vulgare
Y25]
gi|308755988|gb|ADO43917.1| type I secretion target repeat protein [Ketogulonicigenium vulgare
Y25]
Length = 336
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/234 (14%), Positives = 63/234 (26%), Gaps = 20/234 (8%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
GG + L + G + + + + ++G +G+D++ G ++ SG+D
Sbjct: 101 GGAGDDELLGGNGNDVLIGGDGDDKLYGGAGDDILLGEAGDDLIHGGDGDDYLHGGSGDD 160
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
V G G D ++ I+ Q +
Sbjct: 161 VLHGGPGDDILV--GGLGSDTLFGGAGNDILDGREPAGQATRDWLN------------GG 206
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD-----DL 411
L A + G D F G +E +D D L YD L
Sbjct: 207 AGDDRLYLGA-LDIGHGGTGADTFVLTAAQGAEGFAEVQDYISDDDLIEVLYDGDTPPVL 265
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
G + EG+ + + +D+ +
Sbjct: 266 TTAAGQGGVMLLADGVALAFFEGQADLPLDRIVLTPAADDITDTSGTEWLQRWA 319
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/240 (15%), Positives = 69/240 (28%), Gaps = 10/240 (4%)
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
+ G DLLD + L+ + + + + ++G G+D + G +
Sbjct: 44 TAGGDLLDEDDPIEITTPAPLDPLQGILAWAAKGGEVLQGSALNDYLLGDDGDDRLEGGA 103
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++ +GNDV G G D + + + +++ + L
Sbjct: 104 GDDELLGGNGNDVLIGGDGDDKLY--GGAGDDILLGEAGDDLIHGGDGDDY--------L 153
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
IL + L G D+ + + + D LY
Sbjct: 154 HGGSGDDVLHGGPGDDILVGGLGSDTLFGGAGNDILDGREPAGQATRDWLNGGAGDDRLY 213
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 464
LG+ D G+D G E ++ + L + D A
Sbjct: 214 LGALDIGHGGTGADTFVLTAAQGAEGFAEVQDYISDDDLIEVLYDGDTPPVLTTAAGQGG 273
>gi|50731121|ref|XP_417176.1| PREDICTED: similar to Interstitial collagenase precursor (Matrix
metalloproteinase-1) (MMP-1) [Gallus gallus]
Length = 466
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 61/184 (33%), Gaps = 30/184 (16%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSI------- 75
W + Y+ TT D+ E + AL WS V LTF++T
Sbjct: 109 WKKNNLTYRIVNYTTKMRQTDVDE-------AIQKALKVWSSVTPLTFQKTEDKIADIMI 161
Query: 76 -------HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ + F N + +++ D+ + W G+G L HE+
Sbjct: 162 SFAYRDHNDNSPFDGPNGLLAHAFQPGEGLGGDVHLDEEETWTKD-GRGYNLFIVVAHEL 220
Query: 129 GHALGLMHPGS-YNGGYPVYGVDNDYE----NDSFLTSVMSYFMPQDSMMDASFGYCATP 183
GH+LGL H YP Y + E D Y D++ TP
Sbjct: 221 GHSLGLSHSNDPGALMYPNYAYTDPKEFLLPQDDIDGIQAIYGQSDDAVQPTG---PTTP 277
Query: 184 MVSD 187
V D
Sbjct: 278 QVCD 281
>gi|311105413|ref|YP_003978266.1| hemolysin-type calcium-binding repeat family protein 3 [Achromobacter
xylosoxidans A8]
gi|310760102|gb|ADP15551.1| hemolysin-type calcium-binding repeat family protein 3 [Achromobacter
xylosoxidans A8]
Length = 2061
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 9/112 (8%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G N I +++ G GND++ G + N+ + +GNDV G G DT
Sbjct: 1878 GGNDELHGGNGNDIIYGQGGNDTLYGDDGNDILYGGTGNDTLYGGNGNDVLIGGKGNDTL 1937
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
A S +K + + D + D F+D I +
Sbjct: 1938 VGGAGSDTFKWELNDQGTV----GAPAVDTIKD-----FSDATIANGGDILD 1980
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 39/158 (24%), Gaps = 28/158 (17%)
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDG----------------SSGLDTFFYYAP 312
ES + S + V+ N+ F GNDV G + D
Sbjct: 1780 ESALVSGSSSNVLAPVGNDKIFGGDGNDVLFGDTINTDQLPWGVNGNPAKPADYLDGSGL 1839
Query: 313 SYLYKIYRFENAIIVYDAN------------EHKQDFLSDVERLRFADQCIDSVNVKQRS 360
L + +N + DA+ + + D + L +
Sbjct: 1840 DGLKQFLLLKNGVQPTDADLHKFISDNHGMFDVQGDTRGGNDELHGGNGNDIIYGQGGND 1899
Query: 361 ILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
L + L G D +G D
Sbjct: 1900 TLYGDDGNDILYGGTGNDTLYGGNGNDVLIGGKGNDTL 1937
>gi|157278171|ref|NP_001098185.1| collagenase [Oryzias latipes]
gi|71361197|dbj|BAE16357.1| collagenase [Oryzias latipes]
Length = 470
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 59/190 (31%), Gaps = 46/190 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + Y+ T ++ E AL W++V L F + S +DI
Sbjct: 106 WEKNSLTYRITNYTPDMSKEEVDE-------SIEKALQVWARVTPLRFTKIYSSTADIMV 158
Query: 82 ISSNNGYVCTPRYDS-------------RYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
+ +D + +FD + + + G +L A HE
Sbjct: 159 SFGQRAHGDYYPFDGPDGTLAHAFAPAPGIGGDAHFDDDETFTFRSNTGYVLFMVAAHEF 218
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H + + SY P+ +F D+
Sbjct: 219 GHSLGLSHSDDPGA---------------LMYPIYSYRNPE------TFVLPR----DDV 253
Query: 189 VAVQKIYGAP 198
+Q +YG
Sbjct: 254 RGIQSLYGPN 263
>gi|149202355|ref|ZP_01879328.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
gi|149144453|gb|EDM32484.1| type I secretion target repeat protein [Roseovarius sp. TM1035]
Length = 748
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 58/142 (40%), Gaps = 6/142 (4%)
Query: 174 DASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL 233
D+ T + +D +A G G+ GN++ + + + + G +
Sbjct: 145 DSVNASTNTNLGADRLAQAWDNGVVDGTGGNDLINGSYIEPIANGSDRVDNGDG-----V 199
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
+ G + I+ + + + G N ++ T +S+ G SGND ++G N+ +
Sbjct: 200 SGPGFNDDVINAGAGNDTVLAGL-GNDSVQGGTGADSLSGESGNDTLLGQGGNDTLIGGN 258
Query: 294 GNDVFDGSSGLDTFFYYAPSYL 315
G+D +G +G D + +
Sbjct: 259 GDDSLEGGAGNDVLYGDGGTAT 280
>gi|126327138|ref|XP_001366724.1| PREDICTED: similar to matrix metallopeptidase 8 (neutrophil
collagenase) [Monodelphis domestica]
Length = 469
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 58/193 (30%), Gaps = 48/193 (24%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH--SDIK 80
W+ I Y T D+ A WS L F + + +DI+
Sbjct: 109 WNKNDITYSLINYTPDLPKADVDS-------AIEKAFQLWSHPTPLKFTRSDNNNEADIQ 161
Query: 81 FISSNNGYVCTPRYDS-------------RYFMEINFDKADVWRYGIGKGTILSHNALHE 127
+ + +D + +FD+ + W G +GT L A HE
Sbjct: 162 ISFARGAHGDNSPFDGESGILAHAYQPGRGIGGDAHFDEDETWSKG-SRGTNLFLVAAHE 220
Query: 128 IGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H P + Y T V+S D
Sbjct: 221 FGHSLGLAHS-----SDPGALMFPTYSFSEPSTYVLS--------------------QDD 255
Query: 188 IVAVQKIYGAPKG 200
I +Q +YG
Sbjct: 256 INGIQFLYGQSNN 268
>gi|300693942|ref|YP_003749915.1| glycosyltransferase domain [Ralstonia solanacearum PSI07]
gi|299075979|emb|CBJ35291.1| hypothethical protein, Glycosyltransferase domain [Ralstonia
solanacearum PSI07]
Length = 610
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 33/113 (29%), Gaps = 14/113 (12%)
Query: 520 NPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR--SITFNPDLYLTSYD 577
F Y + D+ + +H+ G E R F+ Y Y
Sbjct: 109 ESGLFDPDFYRRLNPDIAR--------LADPLEHYLQIGGFEWRRAHPRFDAQWYAGRYG 160
Query: 578 DLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNLSEKSRDKADLSL 630
D+ + HYI G +EGR+ F + +R L
Sbjct: 161 DVL----TSGLHPLVHYILIGRQEGRSAVPPARLFDIAKKMISDARAIEHEML 209
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 33/123 (26%), Gaps = 16/123 (13%)
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEE---GRFVTFDSYLYLGSYDDLRNVFGSD 502
+ S+ I+ + FD Y D+
Sbjct: 73 LDSNGIAISNGPSPATNPNRLRYPAVEPEEFRRIVSESGLFDPDFYRRLNPDIAR----- 127
Query: 503 RGAAARHYITHGVKEGRNPDA-FKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
HY+ G E R F A Y + D++ + H+ G +E
Sbjct: 128 LADPLEHYLQIGGFEWRRAHPRFDAQWYAGRYGDVLTS-------GLHPLVHYILIGRQE 180
Query: 562 GRS 564
GRS
Sbjct: 181 GRS 183
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 14/87 (16%)
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGR--FVTFDSYLYLGSYD 493
F Y + D+ + +H+ G E R FD+ Y G Y
Sbjct: 109 ESGLFDPDFYRRLNPDIAR--------LADPLEHYLQIGGFEWRRAHPRFDAQWYAGRYG 160
Query: 494 DLRNVFGSDRGAAARHYITHGVKEGRN 520
D+ HYI G +EGR+
Sbjct: 161 DVLTSG----LHPLVHYILIGRQEGRS 183
>gi|153949079|ref|YP_001399808.1| phage minor structural protein [Yersinia pseudotuberculosis IP 31758]
gi|152960574|gb|ABS48035.1| putative phage minor structural protein [Yersinia pseudotuberculosis
IP 31758]
Length = 3104
Score = 61.7 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 6/127 (4%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDL--TLIGGVKNYIDLNTESWSSI 253
G + G N + + + G+D + L L + + ID++ +S +
Sbjct: 2167 GFKQYQGGENADTFILTSATASKSHILSGGEGNDTVALGEVLGNEIDSIIDISKGYYSQV 2226
Query: 254 GGY-EKNMTIAQHTVIESVVGSSG-NDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
G EK + + E+++G ND +IGN +N G+D G+ G D +
Sbjct: 2227 NGGVEKQVALLYD--FENILGHENVNDTIIGNDVDNYLNGMGGDDKIWGNGGNDLLALQS 2284
Query: 312 PSYLYKI 318
Sbjct: 2285 GLAQGGT 2291
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 47/153 (30%), Gaps = 30/153 (19%)
Query: 274 SSGNDVVIGNSA----NNVFFESSGNDVFD-----------GSSGLDTFFYYAPSYLYKI 318
SSGND V+ SA N GND G G DT++Y A S I
Sbjct: 2631 SSGNDEVVITSATFLPGNYIDTGDGNDAIIYIRGQEGTMLKGGGGDDTYYYSAGSGAINI 2690
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+Y LS ER + + V + + + D
Sbjct: 2691 ADTSGLDHLYLDKHILLHTLSA-ER-----RENNLVLNIADNT----SGRIIFVDWYLAD 2740
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ EF E ITFD L Y D
Sbjct: 2741 ENKV-----EFIWVEDSQITFDELFSLRPYSDE 2768
Score = 39.0 bits (89), Expect = 2.4, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 10/135 (7%)
Query: 274 SSGNDVVIG-NSANNVFFESSGNDVFDGSSGLDTFFYYAPSY--LYKIYRFENAIIVYDA 330
G+DV G + N+F SG + G DTF + + + + E V
Sbjct: 2146 GGGDDVAEGYHKKKNIFTIGSGFKQYQGGENADTFILTSATASKSHILSGGEGNDTVALG 2205
Query: 331 NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS-------YEDLIQVIGQDVFESM 383
+ S ++ + ++ KQ ++L + + +I + M
Sbjct: 2206 EVLGNEIDSIIDISKGYYSQVNGGVEKQVALLYDFENILGHENVNDTIIGNDVDNYLNGM 2265
Query: 384 KHFYEFGLSEGRDIT 398
+ + G D+
Sbjct: 2266 GGDDKIWGNGGNDLL 2280
>gi|157817855|ref|NP_001100270.1| matrix metalloproteinase-20 [Rattus norvegicus]
gi|149020723|gb|EDL78528.1| matrix metalloproteinase 20 (enamelysin) (predicted) [Rattus
norvegicus]
Length = 482
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 56/199 (28%), Gaps = 55/199 (27%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ T ++P + AL WS V L F + +DI
Sbjct: 116 WKKNILTYRVSKYTP--------SMSPTEVDKAVHMALHAWSTAVPLIFVRINSGEADIM 167
Query: 81 FISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ P + +FD A+ W G G L A
Sbjct: 168 ISFETGDHGDSYPFDGPRGTLAHAFAP--GEGLGGDTHFDNAEKWTMGT-NGFNLFTVAA 224
Query: 126 HEIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPM 184
HE GHALGL H YP Y N Y
Sbjct: 225 HEFGHALGLGHSTDPSALMYPTYKYQNPYRFHLPKD------------------------ 260
Query: 185 VSDIVAVQKIYGAPKGSLG 203
D+ +Q +YG K G
Sbjct: 261 --DVKGIQALYGPRKTFPG 277
>gi|119484362|ref|ZP_01618979.1| hypothetical protein L8106_01552 [Lyngbya sp. PCC 8106]
gi|119457836|gb|EAW38959.1| hypothetical protein L8106_01552 [Lyngbya sp. PCC 8106]
Length = 1332
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 70/252 (27%), Gaps = 20/252 (7%)
Query: 180 CATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV 239
T M S +G+ G + + ++ S G+D+++ G
Sbjct: 1044 SETLMGSADNDELHGFGSNDTLFG---MGGDDNLEGEAGNDVLFGSQGNDVIN----GNF 1096
Query: 240 KNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFD 299
+ + G + I +S+ G +GND++ GN+ +++ F +G D
Sbjct: 1097 GLDTLYAGKDNDILFGGDNADHIWGDIGADSISGGNGNDLLFGNTEDDLVFGDAGEDTLF 1156
Query: 300 GS-------SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD-FLSDVERLRFADQCI 351
G G Y + ++ ++ ++L +
Sbjct: 1157 GGVGNDSLDGGDGDDELYGNIDNDSVNGGTGNDTIFGGKQNDTLCGGEGNDQLFGNLEAD 1216
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ L + L G D G D +GS D
Sbjct: 1217 ILTGCEGNDSLFGGKDNDSLSGGSGDDFVSGDLGDNTLTGGSGNDT-----FVIGSGSDF 1271
Query: 412 RNVFGSDRGAAA 423
F +
Sbjct: 1272 LLDFANGTDKLL 1283
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 71/249 (28%), Gaps = 21/249 (8%)
Query: 231 LDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFF 290
++ + I T ++ G N + +++ G G+D + G + N+V F
Sbjct: 1025 IETSFQVNTIQNIQNGTLGSETLMGSADNDELHGFGSNDTLFGMGGDDNLEGEAGNDVLF 1084
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
S GNDV +G+ GLDT + A ++ +NA ++ + L F +
Sbjct: 1085 GSQGNDVINGNFGLDTLY--AGKDNDILFGGDNADHIWGDIGADSISGGNGNDLLFGNTE 1142
Query: 351 IDS--VNVKQRSILEY-----------------TASYEDLIQVIGQDVFESMKHFYEFGL 391
D + + ++ + + G D K
Sbjct: 1143 DDLVFGDAGEDTLFGGVGNDSLDGGDGDDELYGNIDNDSVNGGTGNDTIFGGKQNDTLCG 1202
Query: 392 SEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 451
EG D F + N G L + ++
Sbjct: 1203 GEGNDQLFGNLEADILTGCEGNDSLFGGKDNDSLSGGSGDDFVSGDLGDNTLTGGSGNDT 1262
Query: 452 LINAFADAP 460
+
Sbjct: 1263 FVIGSGSDF 1271
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 73/270 (27%), Gaps = 20/270 (7%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ D G + I GL +
Sbjct: 1046 TLMGSADNDELHGFGSNDTLFGMGGDDNLEGEAGNDVLFGSQGNDVINGNFGLDTLYAGK 1105
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
++G DN D + + + + D FG +V ++G
Sbjct: 1106 DNDILFGGDNA---DHIWGDIGADSISGGNGNDLLFGNTEDDLVFGDAGEDTLFGGVGND 1162
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
+ + + ++ G+D + + ++ G E N
Sbjct: 1163 SLDGGDGDDELYGNID-NDSVNGGTGNDTI-------------FGGKQNDTLCGGEGNDQ 1208
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + + G GND + G N+ SG+D G G +T S
Sbjct: 1209 LFGNLEADILTGCEGNDSLFGGKDNDSLSGGSGDDFVSGDLGDNTL--TGGSGNDTFVIG 1266
Query: 322 ENAIIVYDANEHKQDFLSDVERLRFADQCI 351
+ + D + D L VE L F I
Sbjct: 1267 SGSDFLLD-FANGTDKLLLVEGLTFEQLAI 1295
Score = 38.6 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 29/219 (13%), Positives = 49/219 (22%), Gaps = 7/219 (3%)
Query: 339 SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+D + L + LE A + L G DV + DI
Sbjct: 1051 ADNDELHGFGSNDTLFGMGGDDNLEGEAGNDVLFGSQGNDVINGNFGLDTLYAGKDNDIL 1110
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
F + D+ S + L ++ L D
Sbjct: 1111 FGGDNADHIWGDIGADSISGGNGNDLLFGNTEDDLVFGDAGEDTLFGGVGNDSLDGGDGD 1170
Query: 459 APDLVQVGKDHFSNFGCEEGRFVT--FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
+ D + + F D+ D L +D G
Sbjct: 1171 DELYGNIDNDSVNGGTGNDTIFGGKQNDTLCGGEGNDQLFGNLEADILTGCE-----GND 1225
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+L + + + D +G D F
Sbjct: 1226 SLFGGKDNDSLSGGSGDDFVSGDLGDNTLTGGSGNDTFV 1264
>gi|89071251|ref|ZP_01158427.1| PaxA, putative [Oceanicola granulosus HTCC2516]
gi|89043215|gb|EAR49446.1| PaxA, putative [Oceanicola granulosus HTCC2516]
Length = 369
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/228 (17%), Positives = 60/228 (26%), Gaps = 15/228 (6%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G + GN N GND G G D +I +
Sbjct: 150 TSGEGKLDLQGNGRGNRLSGEDGNDTIKGKGGNDRI--KGKDGNDRIDGGSGRDKI--DG 205
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+D + D R L + L G+D + +
Sbjct: 206 GDGRDKIKG------GDGRDKIDGGNGRDKLYGQDGNDRLEGGRGKDTLKGGDGRDKLKG 259
Query: 392 SEGRDITF----DSYLYLGSYDD-LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
G D + D L GS +D L+ G+D Y +++ D + + +
Sbjct: 260 ESGNDKLYGQRGDDKLDGGSGNDKLKGGSGADSFVFRDGYDRDKIRDFSGKDEIRLDDNL 319
Query: 447 ASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ V G F G + DS L S D
Sbjct: 320 WEGNLSARQVVNRFADVVDGNVEFDFGGGDVLTLQGVDSTRGLASDID 367
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 42/135 (31%), Gaps = 14/135 (10%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLD------LTLIGGVKNYIDLNTE--------SWSSI 253
+ K I G D +D G ++ ID +
Sbjct: 180 GGNDRIKGKDGNDRIDGGSGRDKIDGGDGRDKIKGGDGRDKIDGGNGRDKLYGQDGNDRL 239
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G T+ + + G SGND + G ++ SGND G SG D+F +
Sbjct: 240 EGGRGKDTLKGGDGRDKLKGESGNDKLYGQRGDDKLDGGSGNDKLKGGSGADSFVFRDGY 299
Query: 314 YLYKIYRFENAIIVY 328
KI F +
Sbjct: 300 DRDKIRDFSGKDEIR 314
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 19/165 (11%), Positives = 34/165 (20%)
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA 366
F + + EN + RL D ++
Sbjct: 130 FDFGGGRVAKTMMATENFGRTSGEGKLDLQGNGRGNRLSGEDGNDTIKGKGGNDRIKGKD 189
Query: 367 SYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + G+D + + +GRD Y N
Sbjct: 190 GNDRIDGGSGRDKIDGGDGRDKIKGGDGRDKIDGGNGRDKLYGQDGNDRLEGGRGKDTLK 249
Query: 427 ITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
G + + L + L + G D F
Sbjct: 250 GGDGRDKLKGESGNDKLYGQRGDDKLDGGSGNDKLKGGSGADSFV 294
>gi|83749293|ref|ZP_00946291.1| RTX family calcium-binding cytotoxins and bacteriocins [Ralstonia
solanacearum UW551]
gi|207723114|ref|YP_002253516.1| hemolysin-type calcium-binding region (partial sequence) protein
[Ralstonia solanacearum IPO1609]
gi|83724024|gb|EAP71204.1| RTX family calcium-binding cytotoxins and bacteriocins [Ralstonia
solanacearum UW551]
gi|206588307|emb|CAQ19002.1| hemolysin-type calcium-binding region (partial sequence) protein
[Ralstonia solanacearum IPO1609]
Length = 245
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 56/209 (26%), Gaps = 58/209 (27%)
Query: 248 ESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ G N T+ +++ G ND + G + N+V +GND G G DT+
Sbjct: 13 GGDDVLDGGAGNDTLYGGEGNDTLRGGDDNDSLYGGNGNDVLDGGTGNDTLSGEGGNDTY 72
Query: 308 FYYAPSYLYKIYR-------------------------FENAIIVYDANEHKQDFLSD-- 340
+ IY + + + D ++
Sbjct: 73 LFGKGDGQDFIYSDYDTSSNKLNVIQFKDGVSPSEVVVTRSGSDLVLSIAGTTDKITASM 132
Query: 341 -------------VERLRFADQCI------------------DSVNVKQRSILEYTASYE 369
+++++F+D V + + +
Sbjct: 133 AFYWDDTANPYNPIQQVKFSDGTAWDLATIKAKALIGDDSSQTLVGYTEADTINALGGND 192
Query: 370 DLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
++ G DV + EG D
Sbjct: 193 NIYGQGGDDVLDGGAGNDTLYGGEGNDTL 221
Score = 47.9 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 71/226 (31%), Gaps = 9/226 (3%)
Query: 79 IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG---LM 135
S+ G + + D R G ++ N + G L
Sbjct: 5 ATTTSTVRGGDDVLDGGAGNDTLYGGEGNDTLRGGDDNDSLYGGNGNDVLDGGTGNDTLS 64
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
G + G D+ + TS + Q + T SD+ V I
Sbjct: 65 GEGGNDTYLFGKGDGQDFIYSDYDTSSNKLNVIQFKDGVSPSEVVVTRSGSDL--VLSIA 122
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G + + + IQ + S G + +K + +S ++ G
Sbjct: 123 GTTDKITASMAFYWDDTANPYNPIQQVKFSDGT----AWDLATIKAKALIGDDSSQTLVG 178
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGS 301
Y + TI +++ G G+DV+ G + N+ + GND G
Sbjct: 179 YTEADTINALGGNDNIYGQGGDDVLDGGAGNDTLYGGEGNDTLRGG 224
Score = 44.4 bits (103), Expect = 0.069, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 48/234 (20%), Gaps = 13/234 (5%)
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
D L E L + L
Sbjct: 4 AATTTSTVRGGDDVLDGGAGNDTLYGGE------GNDTLRGGDDNDSLYGGNGNDVLDGG 57
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
G D + +G F Y S + L + D + + +T +
Sbjct: 58 TGNDTLSGEGGNDTYLFGKGDGQDFIYSDYDTSSNKLNVIQFKDGVSPSEVVVTRSGSDL 117
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
A + AS + A+ + +Q K +G + D
Sbjct: 118 VLSIAGTTDKITASMAFYWDDTANPYNPIQQVK-------FSDGTAWDLATIKAKALIGD 170
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQ 548
+ A G L+ A ++ L +
Sbjct: 171 DSSQTLVGYTEADTINALGGNDNIYGQGGDDVLDGGAGNDTLYGGEGNDTLRGG 224
>gi|115523032|ref|YP_779943.1| heme peroxidase [Rhodopseudomonas palustris BisA53]
gi|115516979|gb|ABJ04963.1| heme peroxidase [Rhodopseudomonas palustris BisA53]
Length = 3113
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 64/229 (27%), Gaps = 22/229 (9%)
Query: 214 KDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTV 267
+P + S GDD + D+ + + I + + +
Sbjct: 2819 TGTPQPDVLVGSAGDDNIVAFADADVIIADAGADAISAGDGA-DFVNAGAGRDVVFAGAG 2877
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ V G D + G++ N+ F GND+ + +G DT F A S L + +
Sbjct: 2878 DDQVFGGDHADTIYGDAGNDRIFGDQGNDMINAGAGDDTVFGGAGSDLLVAEIGDGNDVY 2937
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTA------SYEDLIQ------VI 375
+ + S ++ L + + L + + +
Sbjct: 2938 FGDDSEGG---SGIDTLDISAATVAVTVNLGAGALLQGSVVSSQTGNDTIWGIENVNTGS 2994
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
G D + G D D + DR +
Sbjct: 2995 GNDTITASNAVNVINGGAGDDTFRFLTASAADGDTILGFEPGDRLDLSG 3043
Score = 45.2 bits (105), Expect = 0.033, Method: Composition-based stats.
Identities = 52/345 (15%), Positives = 99/345 (28%), Gaps = 49/345 (14%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA- 131
D + + +E ++ D+W G+ + + L +A
Sbjct: 782 VDQDGDATVAADRT--AFLTGTGAWAGVETGLNRIDLWIGGLAEKKMPFGGMLGSTFNAI 839
Query: 132 --LGLMHPGSYNGGYPVYGVDNDY-----ENDSFLTSVMSYFMPQDSMMDASFGYCA--- 181
L L + + Y + E +SF +M+ D G
Sbjct: 840 FELQLENLQDGDRFYYLTRTQGQNFLNMLEQNSFAKMIMANTDLAQPGPDGIRGTADDIV 899
Query: 182 -------TPMVSD-----IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDD 229
+ D A Q+ Y + G + + + + + I D G
Sbjct: 900 PRHIGVDSFADYDYVLEVDEANQEDY--NGAAAGKDPHGADPFMEALGLGKVIRDDPGT- 956
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
G NYI + +GG N TI + G+D + G+ ++
Sbjct: 957 ------AGPDANYIRFSGGEHIVVGGTSGNDTI---------ITDFGDDGIWGDDGDDRI 1001
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRF 346
+G D+ +G +G D S + + AN + D L S + +
Sbjct: 1002 ESGAGVDLVNGGAGNDII---TDSGDTGDFIKGDEGDDVIANSNGIDILMGGSGKDVVFV 1058
Query: 347 ADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
+ + + + L+ G D E+ F
Sbjct: 1059 GVDDTEVFAGEGDDFVLGGDGVDFLLGNEGDDWMEAGGGFDTTAG 1103
Score = 45.2 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 37/255 (14%), Positives = 64/255 (25%), Gaps = 21/255 (8%)
Query: 32 PDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISS------N 85
PDVL +I +A S F D+ F +
Sbjct: 2824 PDVLVGSAGDDNIVAFADADVIIADAGADAISAGDGADFVNAGAGRDVVFAGAGDDQVFG 2883
Query: 86 NGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYP 145
+ T D+ D+ G G T+ + +G G
Sbjct: 2884 GDHADTIYGDAGNDRIFGDQGNDMINAGAGDDTVFGGAGSDLLVAEIG--------DGND 2935
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
VY D+ T +S ++ + +VS I+G + G
Sbjct: 2936 VYFGDDSEGGSGIDTLDISAATVAVTVNLGAGALLQGSVVSSQTGNDTIWGIENVNTG-- 2993
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLN--TESWSSIGGYEKNMTIA 263
S + I GDD L + G + N+ ++
Sbjct: 2994 --SGNDTITASNAVNVINGGAGDDTFRFLTASAADGDTILGFEPGDRLDLSGMDANL-VS 3050
Query: 264 QHTVIESVVGSSGND 278
++ + N
Sbjct: 3051 GGDQSFVLINGAFNA 3065
Score = 42.5 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 52/193 (26%), Gaps = 11/193 (5%)
Query: 296 DVFDGSSGLDTFFYYAP-----SYLYKIYRFENAIIVYDANEHKQDFL---SDVERLRFA 347
DV GS+G D +A + + +D + + +++
Sbjct: 2825 DVLVGSAGDDNIVAFADADVIIADAGADAISAGDGADFVNAGAGRDVVFAGAGDDQVFGG 2884
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF--GLSEGRDITFDSYLYL 405
D + + + G D + +G D+ F
Sbjct: 2885 DHADTIYGDAGNDRIFGDQGNDMINAGAGDDTVFGGAGSDLLVAEIGDGNDVYFGDDSEG 2944
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
GS D ++ + A + + +G + + I E++ +
Sbjct: 2945 GSGIDTLDISAA-TVAVTVNLGAGALLQGSVVSSQTGNDTIWGIENVNTGSGNDTITASN 3003
Query: 466 GKDHFSNFGCEEG 478
+ + ++
Sbjct: 3004 AVNVINGGAGDDT 3016
Score = 41.3 bits (95), Expect = 0.48, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 45/130 (34%), Gaps = 4/130 (3%)
Query: 211 VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES 270
+ + + +GG + T ++ N + N+ + + +
Sbjct: 1764 TGINGANNLTATHPAGGPTTITDTGFTNGGSF---NYTVSDGLATDAANVQVVRDVT-GA 1819
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G++G D+++G+ A N + GND+ G D+ + A S +
Sbjct: 1820 INGNNGTDILVGDGAANTLEGAGGNDLIFAGGGDDSINWTATSIGAVDIANDGRDFADGG 1879
Query: 331 NEHKQDFLSD 340
F+ +
Sbjct: 1880 AGTLDRFVVN 1889
>gi|329848646|ref|ZP_08263674.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843709|gb|EGF93278.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1425
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 54/380 (14%), Positives = 101/380 (26%), Gaps = 29/380 (7%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
GA ++ + + + G D + I L + GG
Sbjct: 994 GADYNDFVWGGGGDDLILGGAGYNDYLDGGDGIDTISYADATSGV-TISLALSGQQTTGG 1052
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+M E++ GSS ND + G+++ NV +G D G G DT++ +
Sbjct: 1053 VSYDML----NGFENLTGSSFNDKLTGDASANVIDGGAGGDRMVGGLGNDTYYVDNVADS 1108
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
E ++ + + + + +IL + L
Sbjct: 1109 VGENHLEGTDTIFASVSYSLVGRAVESLTLTGTGKLTGTGNSLNNILNGNSGNNTLDGAA 1168
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK--- 432
G DV + G D + + ++ G+D ++ Y +G
Sbjct: 1169 GNDVLDGGTGGDRLLGGLGDDTYYVDN--IADSVGENHLEGTDTILSSVSYSLNGRAVEA 1226
Query: 433 ---------EGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF----SNFGCEEGR 479
G L A + L + +G D + +E
Sbjct: 1227 LTLTGSSNLNGTGNSLNNTLTGNAGNNLLDGGAGADKLIGGLGDDTYYVDHVQDNVQELH 1286
Query: 480 FVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
F D+ SY + + G + + + L
Sbjct: 1287 FQGTDAVFSSVSYSLFGRAVEAMTLTGTANINATGNSLNNSLTGN------SGNNRLDGG 1340
Query: 540 FADAPDLVQAGKDHFSNFGY 559
+ G D F G
Sbjct: 1341 VGNDILTGGDGADVFLFLGG 1360
Score = 61.0 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 60/506 (11%), Positives = 120/506 (23%), Gaps = 29/506 (5%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG- 133
+ S + + + + G G TI+ H G
Sbjct: 230 DGGAGDDVISVSVGNSSMSGGDGADLMTGSGYSVTGNGGKGNDTIVGFAGTHSFSGDDGN 289
Query: 134 --LMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV 191
L+ + G D + + D S + M V
Sbjct: 290 DSLIGGDDLDFLSGGSGNDTLFGGGYEDYFSSEEGVDLIDGGDGSDHIRFSFMR--DSTV 347
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
++ + + S +Y G+D
Sbjct: 348 NSVFDMIQAATAEGFTLANGTVLRSIERIDLYFGSGNDTFIGNAYYAHV----YGGIGDD 403
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF----DGSSGLDTF 307
+ + + ++++G G + G +++ +S D SG DT
Sbjct: 404 WMQAGSGSDDLHGEEGNDTLIGGDGWGRLDGWDGDDLLMSASSYDRIHNYIYAGSGNDTV 463
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLS------------DVERLRFADQCIDSVN 355
+ + + ++ I + D L+ + L +
Sbjct: 464 SFELRTAGVTVDLRPDSEIENLIGSNFADVLTADNYTRSLDGRSGSDTLTGGTNANTLMG 523
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
L A + L +G D + +G D+ D+ + N
Sbjct: 524 GDDADALYGQAGNDTLSGGVGDDTLDGGTGIDSLLGGDGADVLTDTAGGSLMQGEAGNDT 583
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ A G +L ++ L D G D +
Sbjct: 584 LTGGTGADDLSGGDGHDSISGEGHVDSLYGGDGNDTLFGGDGDDVIYGGEGNDGINGGAG 643
Query: 476 EEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED 535
++ ++ Y D D A H G F+ + +
Sbjct: 644 DDFLQG--EAGNDSVGYFDALAGVVVDLSGAFPH--ATGGAGNDTLSGFENVLGSDFADT 699
Query: 536 LINAFADAPDLVQAGKDHFSNFGYEE 561
LI + AG D + G +
Sbjct: 700 LIGDDGENRLTGNAGNDSLAGGGGND 725
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 57/409 (13%), Positives = 100/409 (24%), Gaps = 46/409 (11%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
N T D G+G T+ + + G
Sbjct: 507 SGSDTLTGGTN--ANTLMGGDDADALYGQAGNDTLSGGVGDDTLDGGTGIDSLLGGDGAD 564
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
GG + + ND+ + + D+ G + ++
Sbjct: 565 VLTDTAGGS---LMQGEAGNDTLTGGTGADDLSGGDGHDSISGEGHVDSLYGGDGNDTLF 621
Query: 196 GAPKGSLGNNIYK--IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G + IY + G+D + + ++
Sbjct: 622 GGDG---DDVIYGGEGNDGINGGAGDDFLQGEAGNDSVGYFDALAGVVVDL--SGAFPHA 676
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N T++ E+V+GS D +IG+ N ++GND G G D
Sbjct: 677 TGGAGNDTLSG---FENVLGSDFADTLIGDDGENRLTGNAGNDSLAGGGGNDMLR--GWG 731
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV----------------- 356
+ + + + D + D ID++
Sbjct: 732 DNDTLIGGDGTDSLIGGDGDDLLDGGDGYDVILGDAGIDTLTYANASQGVTVNLFVGTGS 791
Query: 357 ---KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-----DSYLYLGSY 408
L +A +DL + E +G D D L
Sbjct: 792 DSITGVENLIGSAYMDDLTGNASDNRIEGGDGTDRLAGGDGNDTLTGGSGADETLMGWDG 851
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
DD G Y G A + Y + +D + A
Sbjct: 852 DDQIVTEGVSGT----GYGGEGNDTLTGVGAGQDTFYGGAGDDSMAGGA 896
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 69/285 (24%), Gaps = 23/285 (8%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N L T + G + ++ +++ G +GND + G S+N+ GND
Sbjct: 40 GTDGNDTYLGTGGNDVVSGVGGDDFLSGGNGADTLNGGTGNDSLQGGSSNDSLTGGDGND 99
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE-------------- 342
DG +G D A D L E
Sbjct: 100 NLDGGTGNDYLNGDGGVTAGADTLNGGIGNDTLAFSGGGDTLDGGEGLDWMVMSLGSETS 159
Query: 343 --RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD 400
+ + + V L ++ G D F +G D
Sbjct: 160 NLTIDLSGINTSTGKVLFDGTLVRNVERVNVWTGAGSDSFVGSAREDWVSTGDGNDTV-- 217
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+ G D + D + L + + N
Sbjct: 218 TGGVGGDSSDTLDGGAGDDV-----ISVSVGNSSMSGGDGADLMTGSGYSVTGNGGKGND 272
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+V H + + D +L +FG
Sbjct: 273 TIVGFAGTHSFSGDDGNDSLIGGDDLDFLSGGSGNDTLFGGGYED 317
Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 45/333 (13%), Positives = 85/333 (25%), Gaps = 17/333 (5%)
Query: 109 VWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMP 168
+ G T L + G NG + G + ++
Sbjct: 37 TYEGTDGNDTYLGTGGNDVVSGVGGDDFLSGGNGADTLNGGTGNDSLQGGSSNDSLTGGD 96
Query: 169 QDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGD 228
+ +D G + A GA + G S T+ G
Sbjct: 97 GNDNLDGGTGNDYLNGDGGVTA-----GADTLNGG----IGNDTLAFSGGGDTLDGGEGL 147
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D + ++L N + +S G + T+ ++ +V +G+D +G++ +
Sbjct: 148 DWMVMSLGSETSNLTIDLSGINTSTGKVLFDGTLVRNVERVNVWTGAGSDSFVGSAREDW 207
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
GND G G D+ + + + + +
Sbjct: 208 VSTGDGNDTVTGGVGGDSSDTLDGGAGDDVISVSVGNSSMSGGD-------GADLMTGSG 260
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ K + A G D G D F Y +
Sbjct: 261 YSVTGNGGKGNDTIVGFAGTHSFSGDDGNDSLIGGDDLDFLSGGSGNDTLFG-GGYEDYF 319
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK 441
V D G + H +++ F
Sbjct: 320 SSEEGVDLIDGGDGSDHIRFSFMRDSTVNSVFD 352
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 8/184 (4%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE-------S 249
+ + GDD + + + S
Sbjct: 1239 GNSLNNTLTGNAGNNLLDGGAGADKLIGGLGDDTYYVDHVQDNVQELHFQGTDAVFSSVS 1298
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+S G + MT+ I + G+S N+ + GNS NN GND+ G G D F +
Sbjct: 1299 YSLFGRAVEAMTLTGTANI-NATGNSLNNSLTGNSGNNRLDGGVGNDILTGGDGADVFLF 1357
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE 369
++ + F +++ + + + ++ AS
Sbjct: 1358 LGGTWKDTVSDFSAVQNDSIDIHAYTGGVANAGLVNQSGANVLITLGGGNTVTVLNASQA 1417
Query: 370 DLIQ 373
D++
Sbjct: 1418 DVLA 1421
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 34/300 (11%), Positives = 70/300 (23%), Gaps = 12/300 (4%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
+ ++ ++ + G+ GND +G N+V G+D G +G DT + +
Sbjct: 27 LAVSDSVMLATYEGTDGNDTYLGTGGNDVVSGVGGDDFLSGGNGADTL--NGGTGNDSLQ 84
Query: 320 RFENAIIVYDA-NEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ + D + + L L + L G D
Sbjct: 85 GGSSNDSLTGGDGNDNLDGGTGNDYLNGDGGV-----TAGADTLNGGIGNDTLAFSGGGD 139
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR----GAAARHYITHGVKEG 434
+ + +S G + + + G V + G
Sbjct: 140 TLDGGEGLDWMVMSLGSETSNLTIDLSGINTSTGKVLFDGTLVRNVERVNVWTGAGSDSF 199
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
+ ++ + G G
Sbjct: 200 VGSAREDWVSTGDGNDTVTGGVGGDSSDTLDGGAGDDVISVSVGNSSMSGGDGADLMTGS 259
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
+V G+ G D +L + L + +D+F
Sbjct: 260 GYSVTGNGGKGNDTIVGFAGTHSFSGDDGNDSLIGGDDLDFLSGGSGNDTLFGGGYEDYF 319
Score = 39.4 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 59/501 (11%), Positives = 126/501 (25%), Gaps = 26/501 (5%)
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT 118
L + V+ F +T I D + + N + M + D G G +
Sbjct: 685 LSGFENVLGSDFADTLIGDDGENRLTGNAGNDSLAGGGGNDMLRGWGDNDTLIGGDGTDS 744
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
++ + + G + G N + + V + + +
Sbjct: 745 LIGGDGDDLLDGGDGYDV-ILGDAGIDTLTYANASQGVTVNLFVGTGSDSITGVENLIGS 803
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG 238
+ + + G L + S +T+ GDD + + G
Sbjct: 804 AYMDDLTGNASDNRIEGGDGTDRLAGGD-GNDTLTGGSGADETLMGWDGDDQIVTEGVSG 862
Query: 239 VKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN------VFFES 292
+ + G T +S+ G + DV++G N F
Sbjct: 863 TGY---GGEGNDTLTGVGAGQDTFYGGAGDDSMAGGAMMDVLVGGDGNGYDGGNDTIFGD 919
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD----FLSDVERLRFAD 348
G+D+ G D ++ ++ I + L++ +R +
Sbjct: 920 LGDDLVSSGGGTDVLDGGDGLDGLQLRWQDSKISIVVDMTQAWTAAGVTLANGSVIRNVE 979
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ +++ + + + +G D + G
Sbjct: 980 FADVMMGHGNDTVIGADYNDFVWGGGGDDLILGGAGYNDYLDGGDGIDTISYADATSGVT 1039
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
L + G + + +G + L AS + + +G D
Sbjct: 1040 ISL-ALSGQQTTGGVSYDMLNGFENLTGSSFNDKLTGDASANVIDGGAGGDRMVGGLGND 1098
Query: 469 HF----SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAF 524
+ E D+ SY + S G
Sbjct: 1099 TYYVDNVADSVGENHLEGTDTIFASVSYSLVGRAVESLTLTGTGKLTGTGNS------LN 1152
Query: 525 KALEYIASHEDLINAFADAPD 545
L + + L A +
Sbjct: 1153 NILNGNSGNNTLDGAAGNDVL 1173
>gi|126724570|ref|ZP_01740413.1| Hemolysin-type calcium-binding protein [Rhodobacterales bacterium
HTCC2150]
gi|126705734|gb|EBA04824.1| Hemolysin-type calcium-binding protein [Rhodobacterales bacterium
HTCC2150]
Length = 843
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/226 (11%), Positives = 62/226 (27%), Gaps = 4/226 (1%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
GN Y + D LD ++ + S+ G + +
Sbjct: 532 GNLYYGLNKGDHDLDGSTASDGGIFKVNLDWDNGSAFAEFVSEAPATGSNDGAVDPRSSD 591
Query: 263 AQHTVIESVVGSSGNDVVIGNSA-NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
A V ++ + + N+V G+D G +G D + ++Y
Sbjct: 592 AFAEVDDTAPFLLRDPIFSNTEGGNDVLRGGEGDDEIYGGAGDDKVI--GGADNDELYGD 649
Query: 322 ENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVF 380
E + + + + + S +++ + + + + + G D
Sbjct: 650 EGSDQIRGGSGSDEIYGGSGDDKILGGSGGDTASGGEDNDYINGGGGNDSISGGSGNDKL 709
Query: 381 ESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
K EG D + +D + + +
Sbjct: 710 VGGKGADTISGGEGDDHMWGGNWAGDEENDTFVISTASGKDMIHDF 755
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 45/177 (25%), Gaps = 30/177 (16%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ G E + I + V+G + ND + G+ ++ SG+D G SG D
Sbjct: 612 TEGGNDVLRGGEGDDEIYGGAGDDKVIGGADNDELYGDEGSDQIRGGSGSDEIYGGSGDD 671
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
D S E +
Sbjct: 672 KIL----------------------GGSGGDTASGGED------NDYINGGGGNDSISGG 703
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSE--GRDITFDSYLYLGSYDDLRNVFGSDRG 420
+ + L+ G D + G + + S D+ + F D
Sbjct: 704 SGNDKLVGGKGADTISGGEGDDHMWGGNWAGDEENDTFVISTASGKDMIHDFEIDHD 760
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 76/449 (16%), Positives = 140/449 (31%), Gaps = 17/449 (3%)
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFI--QTI 222
Y P + G + + G G+ + + I
Sbjct: 25 YVDPNGGTITGENGGVDKFNGNAGSDNIETGGGDDLLAGDMVGEEWSFINRKWVYGPDAI 84
Query: 223 YDSGGD-DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
SG + D TL GG + L I G I + + G GND++
Sbjct: 85 NTSGTPLNSYDDTLYGGDGKDVLLGNGGHDEIYGGTGKDLINAGSGNDDAYGGDGNDILN 144
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
+++ +GND+ + G D Y + + +++ DV
Sbjct: 145 LEDGDDLGVGGAGNDIINAGDGED-LVYGDGQGDNLLNTNTDGTNPTSFDQYAASGGWDV 203
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E + Q S NV+ YT ++ + G E + T +
Sbjct: 204 ETIE--GQTSMSQNVETEEGGTYTIQFDLAANLAGGLT----SGTVEVMWNGEVVGTITA 257
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 461
+ + V + G + ++ + G + + S+E + + D
Sbjct: 258 ESGVYETHSIDVVGDGNEGVLTFNTVSGQDESGVVINMDGPIF---SYEKTMEIYGQEID 314
Query: 462 LVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNP 521
+ + +G+ FD +Y+D G A + +
Sbjct: 315 VAAFAPGQVKLYQVIDGQLKVFDPE--TKNYEDAGEPTGIKINAIGFNVEDDMIYGIAKK 372
Query: 522 DAFKALEYIASHEDL--INAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDL 579
D F L S +DL ++A +A + + G + EG TF+ L S D+
Sbjct: 373 DGFDHLGNPVSKQDLVMMDAEGNAYCIGKTGHGDYVGDFDSEGNLWTFDSSLNRVSAIDV 432
Query: 580 WNVFGSDRSAAAQHYITHGMKEGRALGIS 608
N+ G +Y+ + EGRA I+
Sbjct: 433 DNLDGDGNPLVTDYYLPKDLFEGRAYDIA 461
>gi|56681794|gb|AAW21433.1| leukotoxin A [Pasteurellaceae bacterium I3]
Length = 303
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 40/101 (39%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G N I ++ + G + TI + + + G G+D++ G + ++ GND
Sbjct: 152 GTSHNDIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNGDDFIDGGKGND 211
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G G D F + I E + ++ + +D
Sbjct: 212 LLHGGKGDDIFVHRQGDGNDSITESEGNDKLSFSDSNLKDL 252
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 47/212 (22%), Gaps = 48/212 (22%)
Query: 279 VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE-----NAIIV------ 327
V ++ F SG DG G D Y +Y + V
Sbjct: 44 VATLGDGDDNVFVGSGTTEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVES 103
Query: 328 ------------------------------YDANEHKQDFLSDVERLRFADQCIDSVNVK 357
+ A + +D L VE + K
Sbjct: 104 GKALHEVTSTHTALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSK 163
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGS 417
+ + G D K G D ++ G +DL +
Sbjct: 164 FNDAFNGGDGVDTIDGNDGNDRLFGGKGDDIIDGGNG-----DDFIDGGKGNDLLHGGKG 218
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
D H G + L + S+
Sbjct: 219 DDI--FVHRQGDGNDSITESEGNDKLSFSDSN 248
>gi|332710978|ref|ZP_08430914.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
gi|332350292|gb|EGJ29896.1| hemolysin-type calcium-binding repeat protein [Lyngbya majuscula
3L]
Length = 236
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 49/152 (32%), Gaps = 7/152 (4%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+S+ G N + + +++ G GND +IG + ++ GND G G D
Sbjct: 6 GNNGDNSLIGTANNDMMWGYDGNDTLWGQDGNDQLIGGNGSDQLIGGFGNDTLWGEDGND 65
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS---DVERLRFADQCIDSVNVKQRSIL 362
T + + ++ ++ E D L ++L + + L
Sbjct: 66 TL--WGENGNDQLMGGSGNDTLW--GEDGNDTLWGENGNDQLIGGNGSDQLIGGSGNDTL 121
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
+ L G D + + G
Sbjct: 122 WGEDGNDTLWGGSGNDTLQGQDGNDQLIGDGG 153
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 62/207 (29%), Gaps = 15/207 (7%)
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ + ++ + +D++ G N + + G + + +++
Sbjct: 3 TIQGNNGDNSLIGTANNDMM----WGYDGNDTLWGQDGNDQLIGGNGSDQLIGGFGNDTL 58
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G GND + G + N+ SGND G G DT + + ++ + + +
Sbjct: 59 WGEDGNDTLWGENGNDQLMGGSGNDTLWGEDGNDTL--WGENGNDQLIGGNGSDQLIGGS 116
Query: 332 EHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGL 391
D L D L+ + LI G + +F L
Sbjct: 117 --GNDTLWG------EDGNDTLWGGSGNDTLQGQDGNDQLIGDGGFNDLIGGSGADQFVL 168
Query: 392 S-EGRDITFDSYLYLGSYDDLRNVFGS 417
S EG D + F
Sbjct: 169 STEGFTTITDFEDGIDRIQVSNRTFND 195
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 6/156 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIA 263
Q T++ G+D L GG N + ++ G N +
Sbjct: 45 GSDQLIGGFGNDTLWGEDGNDTLWGENGNDQLMGGSGNDTLWGEDGNDTLWGENGNDQLI 104
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL-YKIYRFE 322
+ ++G SGND + G N+ + SGND G G D +
Sbjct: 105 GGNGSDQLIGGSGNDTLWGEDGNDTLWGGSGNDTLQGQDGNDQLIGDGGFNDLIGGSGAD 164
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
++ + DF ++R++ +++ + +
Sbjct: 165 QFVLSTEGFTTITDFEDGIDRIQVSNRTFNDLGFIL 200
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/201 (13%), Positives = 52/201 (25%), Gaps = 7/201 (3%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ GN+ +N ++ ND+ G G DT + ++ + + D
Sbjct: 2 ATIQGNNGDNSLIGTANNDMMWGYDGNDTL--WGQDGNDQLIGGNGSDQLIGG--FGNDT 57
Query: 338 LS---DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEG 394
L + L + + L + L G D + G
Sbjct: 58 LWGEDGNDTLWGENGNDQLMGGSGNDTLWGEDGNDTLWGENGNDQLIGGNGSDQLIGGSG 117
Query: 395 RDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLIN 454
D + + N + + G + I
Sbjct: 118 NDTLWGEDGNDTLWGGSGNDTLQGQDGNDQLIGDGGFNDLIGGSGADQFVLSTEGFTTIT 177
Query: 455 AFADAPDLVQVGKDHFSNFGC 475
F D D +QV F++ G
Sbjct: 178 DFEDGIDRIQVSNRTFNDLGF 198
Score = 38.6 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 17/144 (11%), Positives = 29/144 (20%)
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
D L + LI G D G D
Sbjct: 26 DGNDTLWGQDGNDQLIGGNGSDQLIGGFGNDTLWGEDGNDTLWGENGNDQLMGGSGNDTL 85
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGK 467
+ + N + +G + L ++ L + Q G
Sbjct: 86 WGEDGNDTLWGENGNDQLIGGNGSDQLIGGSGNDTLWGEDGNDTLWGGSGNDTLQGQDGN 145
Query: 468 DHFSNFGCEEGRFVTFDSYLYLGS 491
D G + ++ S
Sbjct: 146 DQLIGDGGFNDLIGGSGADQFVLS 169
>gi|291567843|dbj|BAI90115.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 884
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 52/149 (34%), Gaps = 8/149 (5%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNT-----ESWSSI 253
Y I+ + + I + G+D L T + +D + ++
Sbjct: 632 STGSMGTSYIIKFETAAPDSVVPIRGTAGNDTLTGTRDADLLLGLDGHDTIKGLGGDDTL 691
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G N + +S+VG G D +IG + N+ +G D+ G G D F +
Sbjct: 692 MGGFGNDYLDGGPGNDSLVGGGGRDTLIGGAGNDTLNGGAGQDILTGGPGADIFVFGFGE 751
Query: 314 Y---LYKIYRFENAIIVYDANEHKQDFLS 339
K + + I +D K D L
Sbjct: 752 SRVMQAKRRVYPDHITDFDIGTDKIDLLK 780
Score = 46.7 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 50/325 (15%), Positives = 84/325 (25%), Gaps = 49/325 (15%)
Query: 81 FISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSY 140
+ G V S AD+ G + T ++ AL
Sbjct: 468 IAVDSAGNVYAKGSFSGSIDINGDGTADLVSAGWAEDTYIAKFNRD---GALVWAQSIEL 524
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
N + +D D + + +D+V+ GA
Sbjct: 525 NNWGGPFNIDPGIAVD-------GTGNVYATGSFSGSIDINGDGTADLVSAGWEEGAYIA 577
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNM 260
+ + + + DD ++ GG ID+N + + + +M
Sbjct: 578 KFNGDGTLVWAESIGERNWGSGNGIAVDDAGNVYARGGFSGRIDINGDGTADL-VSTGSM 636
Query: 261 TIAQHTVIESV--------VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ E+ G++GND + G ++ G+D G G DT
Sbjct: 637 GTSYIIKFETAAPDSVVPIRGTAGNDTLTGTRDADLLLGLDGHDTIKGLGGDDTL----- 691
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
D+L V R L A + L
Sbjct: 692 -----------------MGGFGNDYLDG------GPGNDSLVGGGGRDTLIGGAGNDTLN 728
Query: 373 QVIGQDVFESMKHFY--EFGLSEGR 395
GQD+ FG E R
Sbjct: 729 GGAGQDILTGGPGADIFVFGFGESR 753
Score = 44.0 bits (102), Expect = 0.093, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 45/182 (24%), Gaps = 9/182 (4%)
Query: 231 LDLTLIGGVKNYIDLNTESW---SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
++ DL + W + I + + T+ I SGN + + ++ N
Sbjct: 551 FSGSIDINGDGTADLVSAGWEEGAYIAKFNGDGTLVWAESIGERNWGSGNGIAVDDAGNV 610
Query: 288 VFFES-SGNDVFDGSSGLDTFFYYAPSYLY--KIYRFENAIIVYDANEHKQDFLSDV--- 341
SG +G D + Y K +V D L+
Sbjct: 611 YARGGFSGRIDINGDGTADLVSTGSMGTSYIIKFETAAPDSVVPIRGTAGNDTLTGTRDA 670
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ L D + L + L G D G D
Sbjct: 671 DLLLGLDGHDTIKGLGGDDTLMGGFGNDYLDGGPGNDSLVGGGGRDTLIGGAGNDTLNGG 730
Query: 402 YL 403
Sbjct: 731 AG 732
>gi|296213291|ref|XP_002753210.1| PREDICTED: matrix metalloproteinase-17 [Callithrix jacchus]
Length = 614
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 46/135 (34%), Gaps = 26/135 (19%)
Query: 27 FIRYKPDVLTTHRLSFDITEL---NPNAQEVARW----ALGEWSKVVDLTFEETSIHS-- 77
+ P LS+ + +P ++ R AL WS + L F E + +
Sbjct: 132 RLTAAPTKWNKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDIAPLNFHEVAGSAAD 191
Query: 78 -DIKFI-------------SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK--GTILS 121
I F + P D + +FD + W + G L
Sbjct: 192 IQIDFSKADHNDGYPFDGPGGTVAHAFFPS-DHHTAGDTHFDDDEAWTFRSSDAHGMDLF 250
Query: 122 HNALHEIGHALGLMH 136
A+HE GHA+GL H
Sbjct: 251 AVAVHEFGHAIGLGH 265
>gi|126735754|ref|ZP_01751499.1| putative secreted calcium-binding protein [Roseobacter sp. CCS2]
gi|126714941|gb|EBA11807.1| putative secreted calcium-binding protein [Roseobacter sp. CCS2]
Length = 731
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 4/128 (3%)
Query: 215 DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE-KNMTIAQHTVIESVVG 273
+T+ G D++ + + ID + + ++ + + G
Sbjct: 560 GGSTAETMVGGAGSDVI---VGQEGDDMIDGGSGRSTITSSDRLEDFDQVGGQNGDFLFG 616
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
GND + GNS N++ F GND G G DTF + + + ++ D
Sbjct: 617 GEGNDQIHGNSGNDLLFGGEGNDQLWGGGGFDTFVFKEGNDQIHDFTHGVDTLMLDEALL 676
Query: 334 KQDFLSDV 341
LSDV
Sbjct: 677 DGRELSDV 684
Score = 56.3 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 39/135 (28%), Gaps = 26/135 (19%)
Query: 268 IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
I +G S + ++G + ++V G+D+ DG SG T + +N +
Sbjct: 555 ISMFIGGSTAETMVGGAGSDVIVGQEGDDMIDGGSGRSTITSSDRLEDFDQVGGQNGDFL 614
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFY 387
+ + + + + L G D F
Sbjct: 615 F--------------------------GGEGNDQIHGNSGNDLLFGGEGNDQLWGGGGFD 648
Query: 388 EFGLSEGRDITFDSY 402
F EG D D
Sbjct: 649 TFVFKEGNDQIHDFT 663
>gi|163853285|ref|YP_001641328.1| hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
gi|163664890|gb|ABY32257.1| Hemolysin-type calcium-binding region [Methylobacterium extorquens
PA1]
Length = 540
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/248 (16%), Positives = 77/248 (31%), Gaps = 15/248 (6%)
Query: 192 QKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS 251
Q++ G P + ++ + T D G Y+
Sbjct: 238 QELAGRPAAGTPDEVFG---NLVAAASQATGIDYG------FLNKPEGVAYVVGGRGDDR 288
Query: 252 SIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYA 311
N + ++++G++G D + G++ ++V G D G +G DT+F
Sbjct: 289 LEADGSGNPVLGF-AGDDTLIGTAGADRLFGDAGDDVLRGGGGRDQLVGGAGDDTYFVDT 347
Query: 312 PSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC----IDSVNVKQRSILEYTAS 367
P R + + + + ++E L+ A + L A
Sbjct: 348 PGDQVFEGRGQGTDRLVATSAYTLAAGQEIEILQLAKSTGCAPLSLTGNAFGQRLIGNAG 407
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDI-TFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
L G D G D FD+ L G+ D +R+ D H
Sbjct: 408 DNGLDGGGGDDSLAGGLGADRLTGGAGADTFVFDARLGRGNVDHVRDFASQDDVFHLDHA 467
Query: 427 ITHGVKEG 434
+ G+ G
Sbjct: 468 VFSGLDTG 475
Score = 48.2 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 4/93 (4%)
Query: 555 SNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKS 614
G + F+ L + D + + D H + G+ G ++ QFK
Sbjct: 428 RLTGGAGADTFVFDARLGRGNVDHVRDFASQDDVFHLDHAVFSGLDTGA---LAPEQFK- 483
Query: 615 VMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
+ ++ + AD + + K +L+ D G G
Sbjct: 484 NLGPAKAIKADADDRILYKQKTGELFYDADGSG 516
>gi|329848568|ref|ZP_08263596.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843631|gb|EGF93200.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 977
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/358 (13%), Positives = 89/358 (24%), Gaps = 16/358 (4%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G+ +L + S+ G N + + G G+D ++G S+
Sbjct: 421 GNSSANLLVASTWAAAWFSGEGGNDSLWGRGYNDYFQGGAGTDDLAGYGGDDSLMGGSSV 480
Query: 287 NVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ G+D DG +G DT Y + + +
Sbjct: 481 DFLEGGDGHDYLDGGTGSDTMVGGAGDDTYVVDANGDVVNDQNGGGTDTIMTGLTWTLGT 540
Query: 340 DVERLRFADQCIDSVNVK-QRSILEYTASYEDLIQVIGQD--VFESMKHFYEFGLSEGRD 396
+E L + L L +G D ++ G D
Sbjct: 541 YIENLTLTGSANSKGTGNDLANSLTGNDGNNTLTGGLGDDSYFIQNTGDNVVEANGGGTD 600
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
+ + Y R V +A I + ++ L D +
Sbjct: 601 VIYSQVNY---NLTGRFVETLVLTESATDAIGNSYANALFGNSLNNLLDGGGGADTLGGA 657
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVK 516
A + +EG + S Y+ S G AA
Sbjct: 658 AGNDTYMVNVASDVVIESADEGTDTVYASSSYVLS---ADIERLILTGTAASGTGNASNN 714
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLT 574
D L+ + L+ + + D + ++ + L+
Sbjct: 715 AITGNDGNNVLDGSGGVDTLVGGLGNDTYHIDNSLDIVTEASGAGTDTVFASASYNLS 772
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/288 (13%), Positives = 84/288 (29%), Gaps = 14/288 (4%)
Query: 170 DSMMDASFGYCATPMVSDI--VAVQKIYGAPKGSLGNNIYKIEVQQK---DSPFIQTIYD 224
D D + + + +DI + + + G+ NN S + T+
Sbjct: 677 DEGTDTVYASSSYVLSADIERLILTGTAASGTGNASNNAITGNDGNNVLDGSGGVDTLVG 736
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND-VVIGN 283
G+D + + + N++ V+E++ + +D IGN
Sbjct: 737 GLGNDTYHIDN-SLDIVTEASGAGTDTVFASASYNLS---GRVVENLTLTGADDLTAIGN 792
Query: 284 SANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVER 343
N ++GN++ DG SG DT Y V +A D +
Sbjct: 793 GVGNKLTGNTGNNLLDGGSGADTL--TGGLGNDTYYVQTIGDKVVEAGGEGTDLIYASVT 850
Query: 344 LRFADQCIDSVNVKQRSILEYTAS--YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
+ ++++N+ + ++ + LI G + + G DI
Sbjct: 851 YNLTGRYVETLNLTGSANIDALGNSLANTLIGNAGANTLNGLGGNDILTGGLGADIFLFQ 910
Query: 402 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 449
+ +D + + + +
Sbjct: 911 LGSRSDTVTDFSAAENDTININAYTGGAANEGLITQAGADTVINLGGG 958
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 56/485 (11%), Positives = 128/485 (26%), Gaps = 31/485 (6%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIG--KGTILSHNALHEIGHAL 132
+ + + N D G+ GT + + L ++
Sbjct: 495 GTGSDTMVGGAGDDTYVVDANGDVVNDQNGGGTDTIMTGLTWTLGTYIENLTLTGSANSK 554
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G + + + + + + + ++
Sbjct: 555 GTGNDLANSLTGNDGNNTLTGGLGDDSYFIQNTGDNVVEANGGGTDVIYSQVNYNLTGRF 614
Query: 193 KIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSS 252
S + I + + D GG G +++ ++
Sbjct: 615 VETLVLTESATDAIGNSYANALFGNSLNNLLDGGGGADTLGGAAGNDTYMVNVASDVVIE 674
Query: 253 IGGYEKNMTIAQHTV-----IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF 307
+ A + IE ++ + GN++NN + GN+V DGS G+DT
Sbjct: 675 SADEGTDTVYASSSYVLSADIERLILTGTAASGTGNASNNAITGNDGNNVLDGSGGVDTL 734
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
+ + IV +A+ D + + + ++++ + L +
Sbjct: 735 V--GGLGNDTYHIDNSLDIVTEASGAGTDTVFASASYNLSGRVVENLTLTGADDLTAIGN 792
Query: 368 Y--EDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARH 425
L G ++ + G D + +G G+D A+
Sbjct: 793 GVGNKLTGNTGNNLLDGGSGADTLTGGLGNDTYY--VQTIGDKVVEAGGEGTDLIYASVT 850
Query: 426 YITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDS 485
Y G +++ D + + G + + G + +
Sbjct: 851 YNLTGR------YVETLNLTGSANIDALGNSLANTLIGNAGANTLNGLGGNDILTGGLGA 904
Query: 486 YLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPD 545
++L G+ + E + A A++E LI
Sbjct: 905 DIFLFQ-----------LGSRSDTVTDFSAAENDTININ-AYTGGAANEGLITQAGADTV 952
Query: 546 LVQAG 550
+ G
Sbjct: 953 INLGG 957
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 44/285 (15%), Positives = 79/285 (27%), Gaps = 38/285 (13%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ N + + D G+G T N+L + A G
Sbjct: 706 SGTGNASNNAITGNDGNNVLDGSGGVDTLVGGLGNDTYHIDNSLDIVTEASG-------- 757
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G D + + S+ S + D D+ A+ G
Sbjct: 758 -----AGTDTVFASASYNLSGRVVENLTLTGAD------------DLTAIGN--GVGNKL 798
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTL-------IGGVKNYIDLNTESWSSIG 254
GN T+ G+D + GG + + +++ G
Sbjct: 799 TGNT---GNNLLDGGSGADTLTGGLGNDTYYVQTIGDKVVEAGGEGTDLIYASVTYNLTG 855
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSY 314
Y + + + I+ +G+S + +IGN+ N GND+ G G D F + S
Sbjct: 856 RYVETLNLTGSANID-ALGNSLANTLIGNAGANTLNGLGGNDILTGGLGADIFLFQLGSR 914
Query: 315 LYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+ F A ++ + A
Sbjct: 915 SDTVTDFSAAENDTININAYTGGAANEGLITQAGADTVINLGGGN 959
>gi|284050049|ref|ZP_06380259.1| hemolysin-type calcium-binding region [Arthrospira platensis str.
Paraca]
gi|291565710|dbj|BAI87982.1| hemolysin-type calcium-binding region protein [Arthrospira
platensis NIES-39]
Length = 664
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 63/219 (28%), Gaps = 18/219 (8%)
Query: 197 APKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWS 251
+ S I + G+D L +L GG N L +S
Sbjct: 306 STNTSAQLTTQGINSSLSGFAGGSVLDGGPGNDTLVSVFASDSLFGGDGNDSLLGR-RFS 364
Query: 252 SIGGYEKNMTIAQHTVIES--------VVGSSGNDVVIGNSAN--NVFFESSGNDVFDGS 301
+ G + N T+ + + + G +GND++IG + NV +G+D
Sbjct: 365 IMDGGDGNNTLNGGEWLRTGTTPLEVSLFGGAGNDLIIGAQGSITNVIAGGAGDDTIVFG 424
Query: 302 SGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ--DFLSDVERLRFADQCIDSVNVKQR 359
+ D + L + ++ L + +++ V
Sbjct: 425 TTNDILLSDTANTLGNDSITAANVEFFNEGNVGVSITNLQGNNTVEGSERNDLLVTGSGN 484
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+L + L+ G D G D
Sbjct: 485 DLLLGGNGDDTLLGGAGNDFLFGGSGNDLLDGGPGDDTL 523
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 57/466 (12%), Positives = 108/466 (23%), Gaps = 48/466 (10%)
Query: 201 SLGNNIYKIEVQQK--DSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ G+++Y + + + G+D L + G + D +
Sbjct: 197 NTGDSLYGGQDNDSIVGVGSLSYLSGDEGNDTLRIQNPTGSISPFD-----PQTALVGVT 251
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+T+ +S++G G N +GND + DT +
Sbjct: 252 QVTMMGGAGDDSIIGPIGR----FGEGQNFLDGGAGNDTIMSFAAEDTLL--GGEGDDFL 305
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+A + + L V+V L + L+
Sbjct: 306 STNTSAQLTTQGINSSLSGFAGGSVLDGGPGNDTLVSVFASDSLFGGDGNDSLLGR-RFS 364
Query: 379 VFESMKHFYEFGLSE----GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
+ + E G S D + GS A + G
Sbjct: 365 IMDGGDGNNTLNGGEWLRTGTTPLEVSLFGGAGNDLIIGAQGSITNVIAGGAGDDTIVFG 424
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
D + D I A G ++ D
Sbjct: 425 TTNDILLSDTANTLGNDSITAANVEFFNEGNV-------GVSITNLQGNNTVEGSERNDL 477
Query: 495 LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHF 554
L G+D +G L + ++ L D G +
Sbjct: 478 LVTGSGNDLLL-----GGNGDDTLLGGAGNDFLFGGSGNDLLDGGPGDDTLEGGFGVNTL 532
Query: 555 SNFGYEEGRSI---TFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQ 611
EG + F+ + T+ D F + ++ G +
Sbjct: 533 V---GGEGDNQFFYRFSEAVKTTTSADFITDFNQGGNDRLV-FVRDASVGGFGFALVPGI 588
Query: 612 FKSVMN-----------LSEKSRDKADLSLSFDHKKVDLYTDYFGD 646
S + + + L ++ L D G
Sbjct: 589 SNSELGPNQFIYLPTGLYRDADANINTPVLIYEQASGVLRYDENGS 634
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/260 (15%), Positives = 76/260 (29%), Gaps = 5/260 (1%)
Query: 82 ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYN 141
+ F V G G T++S A + G
Sbjct: 303 DFLSTNTSAQLTTQGINSSLSGFAGGSVLDGGPGNDTLVSVFASDSLFGGDGNDSLLGRR 362
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
G N+ N + + A S + G
Sbjct: 363 FSIMDGGDGNNTLNGGEWLRTGTTPLEVSLFGGAGNDLIIGAQGSITNVIAGGAGDDTIV 422
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMT 261
G + ++ +I + ++ G V I N + +++ G E+N
Sbjct: 423 FGTTNDILLSDTANTLGNDSITAAN----VEFFNEGNVGVSI-TNLQGNNTVEGSERNDL 477
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ + + ++G +G+D ++G + N+ F SGND+ DG G DT
Sbjct: 478 LVTGSGNDLLLGGNGDDTLLGGAGNDFLFGGSGNDLLDGGPGDDTLEGGFGVNTLVGGEG 537
Query: 322 ENAIIVYDANEHKQDFLSDV 341
+N + K +D
Sbjct: 538 DNQFFYRFSEAVKTTTSADF 557
Score = 44.0 bits (102), Expect = 0.078, Method: Composition-based stats.
Identities = 34/233 (14%), Positives = 61/233 (26%), Gaps = 55/233 (23%)
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV-------------KNY 242
G + G + Y +P TI GG+D + + +GG N
Sbjct: 6 GPTFLTSGPDQY--NQDAPFAPRPDTILGLGGNDTITTSTLGGSLVYGDSLVGSDLSGND 63
Query: 243 IDLNTESWSSIGGYEKNM--------------------------TIAQHTVIESVVGSSG 276
+ + ++ G N T+ + +V SG
Sbjct: 64 VLVARGQGDTLFGGPGNDSLLGRAPGVALVGGDGRDTIVAEQPATLYGGAGRDLLVAVSG 123
Query: 277 NDVVIGNSANNVFFES-SGNDVFDGSSGLDTFFYYAPSYLYKI-------YRFENAIIVY 328
+++ GN + GND G G D +Y+ S + N +
Sbjct: 124 GNLMFGNQDEDTILGGLQGNDTIYGGKGDDLIGFYSASGQSNVGLVVPPAVGGANQGNNW 183
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFE 381
D + + + + + S L G D
Sbjct: 184 VNGNIGNDTIVGI------NTGDSLYGGQDNDSIVGVGSLSYLSGDEGNDTLR 230
>gi|75910921|ref|YP_325217.1| polymorphic membrane protein [Anabaena variabilis ATCC 29413]
gi|75704646|gb|ABA24322.1| Polymorphic membrane protein [Anabaena variabilis ATCC 29413]
Length = 1037
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEK 258
G G++ Y +GG+D + ++L T + +I K
Sbjct: 801 TGGNGDDTYNFNASTPLGSDRIQEITTGGNDTISFAG-TNNAARVNLGTIATQTINSNLK 859
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+T++ + VIE+VVG +G+D +IGNS NN +GNDV G G DT S +
Sbjct: 860 -LTLSANNVIENVVGGNGSDRLIGNSLNNTLTGGNGNDVLTGRGGADTLI--GGSGNDIL 916
Query: 319 YRFENAIIVYDANE 332
+ ++
Sbjct: 917 TGGTESDRFLYSSG 930
Score = 51.3 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 64/212 (30%), Gaps = 35/212 (16%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVG-SSGNDVVIGNSAN 286
++ L + L I + + + + ++T IE++ S N GNS+N
Sbjct: 729 NETLRVNLSSPTNATIQKASGTVTITDTLQASVTTTLAEGIENLTLLGSSNINATGNSSN 788
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAP----SYLYKIYRFENAIIVYDANEHKQDFLS--- 339
N +SGN++ G +G DT+ + A S + + A + ++
Sbjct: 789 NTLTGNSGNNILTGGNGDDTYNFNASTPLGSDRIQEITTGGNDTISFAGTNNAARVNLGT 848
Query: 340 ---------------------------DVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+RL +L + LI
Sbjct: 849 IATQTINSNLKLTLSANNVIENVVGGNGSDRLIGNSLNNTLTGGNGNDVLTGRGGADTLI 908
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
G D+ F S GR T + +
Sbjct: 909 GGSGNDILTGGTESDRFLYSSGRAFTSNDFGI 940
>gi|170742090|ref|YP_001770745.1| hypothetical protein M446_3945 [Methylobacterium sp. 4-46]
gi|168196364|gb|ACA18311.1| hypothetical protein M446_3945 [Methylobacterium sp. 4-46]
Length = 547
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 47/156 (30%), Gaps = 45/156 (28%)
Query: 483 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-----------------AFK 525
FD Y Y D R + ARH+ G +EGR P+ F
Sbjct: 24 FDPDFYARRYLDARAL---SPEERARHFAVTGRREGRAPNAEVFLHRLAAHYGPPEPDFD 80
Query: 526 ALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRS------------------ITF 567
Y DL FA + H+ G EGR F
Sbjct: 81 LAFYRRQ-PDLAEVFAQDWEF----LAHYLERGRGEGRPRNVADHLARLERAHGPLGPHF 135
Query: 568 NPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
D Y +DL +F D H++ G EGR
Sbjct: 136 EIDAYR-RNEDLALLF-DDEWQFVAHFLQWGRAEGR 169
Score = 52.5 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 44/160 (27%), Gaps = 38/160 (23%)
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRF------------- 480
G +AF Y + D + HF+ G EGR
Sbjct: 18 GAGEEAFDPDFYARRYLDARA------LSPEERARHFAVTGRREGRAPNAEVFLHRLAAH 71
Query: 481 -----VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI-ASHE 534
FD Y DL VF D HY+ G EGR + L + +H
Sbjct: 72 YGPPEPDFDLAFYR-RQPDLAEVFAQDWEF-LAHYLERGRGEGRPRNVADHLARLERAHG 129
Query: 535 DLINAFADAPDLVQAGK-----------DHFSNFGYEEGR 563
L F HF +G EGR
Sbjct: 130 PLGPHFEIDAYRRNEDLALLFDDEWQFVAHFLQWGRAEGR 169
>gi|321471530|gb|EFX82502.1| hypothetical protein DAPPUDRAFT_48702 [Daphnia pulex]
Length = 225
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 56/156 (35%), Gaps = 27/156 (17%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDI 79
++W + YK T D+ +E+AR A W+ V DL F + +D+
Sbjct: 42 RHWPKKQLTYKIKKYTEDMPKSDV------DREIAR-AFQMWADVTDLAFVHVKNQSADV 94
Query: 80 KFI-----------------SSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
G+ + +FD+ + W G+GT L
Sbjct: 95 DIDILFVSGEHNGEHGSCNRFDGLGHTLAHAAGPIDGGDTHFDEGETWTLDSGQGTNLFQ 154
Query: 123 NALHEIGHALGLMH--PGSYNGGYPVYGVDNDYEND 156
A HE GH+LGL H YP Y D++ D
Sbjct: 155 LATHEFGHSLGLGHTRHVKMAVMYPYYEYQPDFKLD 190
>gi|254422212|ref|ZP_05035930.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
gi|196189701|gb|EDX84665.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
Length = 662
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 79/269 (29%), Gaps = 10/269 (3%)
Query: 74 SIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALG 133
S+ F+ + + ++N D D G + + + + +
Sbjct: 367 SLDGSNGFVINGISAADLSGFSVSGAGDVNDDGIDDIIVNGGGESYVVYGSDAGFSATVE 426
Query: 134 LMHPGSYNGGYPVYGVDNDYEND---SFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
L NG G D + ++ ++ + T +D
Sbjct: 427 LSSLDGSNGFVLDQGRVVSGAGDVNGDGIDDIVIGGYGSENYVVFGAAKSETLTGTDGND 486
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
V G + T++ D+L GG N + +
Sbjct: 487 VLI---GDTGKDTLDGKAGNDFLDGDEGDDTLFGGKDADILI----GGDGNDWLTGGQGF 539
Query: 251 SSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYY 310
++ G N T+ ++++G +GND++ G + G+D G +G D F
Sbjct: 540 DTLYGGNGNDTLLGGNGKDTLIGGNGNDIIKGEVGKDTLIGGMGDDNLFGGAGDDIFVLG 599
Query: 311 APSYLYKIYRFENAIIVYDANEHKQDFLS 339
I F + A+ LS
Sbjct: 600 VGEGRDIIVDFSGRDRIGLASGLGIGDLS 628
Score = 60.6 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 5/153 (3%)
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G +N + E++ G+ GNDV+IG++ + +GND DG G DT F
Sbjct: 462 GYGSENYVVFGAAKSETLTGTDGNDVLIGDTGKDTLDGKAGNDFLDGDEGDDTLF--GGK 519
Query: 314 YLYKIYRFENAIIVYDANEHKQDF-LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ + + + + + L + + I++ + LI
Sbjct: 520 DADILIGGDGNDWLTGGQGFDTLYGGNGNDTLLGGNGKDTLIGGNGNDIIKGEVGKDTLI 579
Query: 373 QVIGQDVFESMKHFYEF--GLSEGRDITFDSYL 403
+G D F G+ EGRDI D
Sbjct: 580 GGMGDDNLFGGAGDDIFVLGVGEGRDIIVDFSG 612
Score = 38.2 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 61/221 (27%), Gaps = 14/221 (6%)
Query: 210 EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIE 269
++ +G LDL+ + G ++ + G I+
Sbjct: 342 NGNDSGESYVVFGSSTGFGATLDLSSLDGSNGFVINGISAADLSGFSVSGAGDVNDDGID 401
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS--YLYKIYRFENAIIV 327
++ + G + + ++ F + DGS+G F + +
Sbjct: 402 DIIVNGGGESYVVYGSDAGFSATVELSSLDGSNG---FVLDQGRVVSGAGDVNGDGIDDI 458
Query: 328 YDANEHKQDFLS----DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
++++ E L D + + L+ A + L G D
Sbjct: 459 VIGGYGSENYVVFGAAKSETLTGTDGNDVLIGDTGKDTLDGKAGNDFLDGDEGDDTLFGG 518
Query: 384 KHFYEFGLSEGRDIT-----FDSYLYLGSYDDLRNVFGSDR 419
K +G D FD+ D L G D
Sbjct: 519 KDADILIGGDGNDWLTGGQGFDTLYGGNGNDTLLGGNGKDT 559
>gi|304394673|ref|ZP_07376592.1| Na-Ca exchanger/integrin-beta4 [Ahrensia sp. R2A130]
gi|303293334|gb|EFL87715.1| Na-Ca exchanger/integrin-beta4 [Ahrensia sp. R2A130]
Length = 834
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 58/417 (13%), Positives = 113/417 (27%), Gaps = 21/417 (5%)
Query: 74 SIHSDIKFIS-SNNGYVCTPRYDSRYFMEINFDK--ADVWRYGIGKGTILSHNALHEIGH 130
++++D F+ N + S + + + G G ++ + G
Sbjct: 422 TVNADGTFLYKQNGAFSALADAASGTSGDTSAADVFSYRLNGGAGANVVIRITGVDSEGD 481
Query: 131 AL-GLMHPGSYNGGYPVYGVDNDYEND--SFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
L G + NGG + +D S + + D + + + +
Sbjct: 482 ELFGTANRDVLNGGIGADTMTAGDGDDVYSVDNTGDTVVEVAAQGHDVVYASASYSLPVN 541
Query: 188 IVAVQKIYGAPKGSLGN---NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+ + G GN N G D+ ++ V + I
Sbjct: 542 VETLILTGGDDINGTGNAESNFLFGNAGSNRLDGGGGADGMSGSGGNDIYVVDNVNDAIS 601
Query: 245 LNTESWSSIGGYEKNMTIAQH------TVIES--VVGSSGNDVVIGNSANNVFFESSGND 296
N + ++ T ++ VG+ + + GNS NN +G D
Sbjct: 602 ENAGEGDDTVESSVDWSLGADFEKLTLTGSDNIYAVGNGLANTITGNSGNNYIDGGTGTD 661
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
+ G +G DT+ + + VE L V
Sbjct: 662 IMRGGAGDDTYVVDNSA--DVVTELNGDGADRVLASIDYILGDFVETLVLTGTATIGVGN 719
Query: 357 KQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFG 416
+ L + L G D F R+ + + + G
Sbjct: 720 SGDNSLIGNEAINVLSGKQGTDYLVGNGGDDIF--VIDRETDASDFDVIADFQGAGVAGG 777
Query: 417 SDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
G +A + G+ + +F S E AP + +D +
Sbjct: 778 DRLGFSAADFGADGIVTQLSQTSFIVSRIDGSGEQQFILADLAPGNSGLIEDDYYFG 834
>gi|209528316|ref|ZP_03276774.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
gi|209491249|gb|EDZ91646.1| Hemolysin-type calcium-binding region [Arthrospira maxima CS-328]
Length = 686
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 4/116 (3%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D+ + + L + + + N T+ + +V G+D+++GN +
Sbjct: 496 GTDHHDVIIGTASDETL-LGFQGDDWLQVSQGNNTLFGGQGNDILVAGQGDDILLGNKDD 554
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVE 342
++ F GND G G DT A + ++ + + D L E
Sbjct: 555 DILFGGDGNDAIYGGQGNDTLV--AGNGNQILFGDQGND-ILFGGTQGVDTLVGGE 607
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 4/122 (3%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
G + + I E+++G G+D + + NN F GND+ G D
Sbjct: 494 WFGTDHHDVIIGTASDETLLGFQGDDWLQVSQGNNTLFGGQGNDILVAGQGDDILL--GN 551
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDS--VNVKQRSILEYTASYED 370
++ + +Y + + ++ F DQ D + L +
Sbjct: 552 KDDDILFGGDGNDAIYGGQGNDTLVAGNGNQILFGDQGNDILFGGTQGVDTLVGGEGNDT 611
Query: 371 LI 372
L+
Sbjct: 612 LV 613
>gi|114640109|ref|XP_001153941.1| PREDICTED: matrix metalloproteinase 3 isoform 1 [Pan troglodytes]
Length = 447
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 54/195 (27%), Gaps = 50/195 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 79 WRKTHLTYRIVNYTPDLPK-------DAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMI 131
Query: 73 ---TSIHSDIK-FISSNN--GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
H D F N + P + +FD + W GT L A H
Sbjct: 132 SFAVREHGDFYPFDGPGNVLAHAYAP--GPGINGDAHFDDDEQWTKDT-TGTNLFLVAAH 188
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
EIGH+LGL H S T + Y + F
Sbjct: 189 EIGHSLGLFH--------------------SANTEALMYPLYHSLTDLTRFRLSQ----D 224
Query: 187 DIVAVQKIYGAPKGS 201
DI +Q +YG P S
Sbjct: 225 DINGIQSLYGPPPDS 239
>gi|109127347|ref|XP_001091146.1| PREDICTED: matrix metalloproteinase-25 [Macaca mulatta]
Length = 562
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/191 (21%), Positives = 60/191 (31%), Gaps = 39/191 (20%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVAR----WALGEWSKVVDLTFEET 73
L W + ++ ++L+ QE R +AL W DLTF E
Sbjct: 110 LSGSVWKKRTLTWRVRSFP------QSSQLS---QETVRVLMNYALMAWGMESDLTFHEV 160
Query: 74 SIHS----DIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYG- 113
DI + P + +FD + W +G
Sbjct: 161 DSSQGQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHP-ISGDTHFDDEETWTFGS 219
Query: 114 -IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSM 172
G+GT L A+HE GHALGL H + N + D + S +D +
Sbjct: 220 TDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGNPDKYRLS----PDDRDGL 275
Query: 173 MDASFGYCATP 183
TP
Sbjct: 276 QQLYGKAPQTP 286
>gi|296480357|gb|DAA22472.1| matrix metalloproteinase 7 [Bos taurus]
Length = 267
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 61/195 (31%), Gaps = 50/195 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIKF 81
W++ + Y+ T+ + +L A WS+ + LTF+ +DI
Sbjct: 104 WTSKVVTYRIMSYTSDLPHITVNQL-------VAKAFKIWSEAIPLTFKRLRWGTADIMI 156
Query: 82 ISS---------------NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ + P + +FD+ + W GIG G + A H
Sbjct: 157 GFARRAHGDPYPFDGPGATLAHAFAP--GPGLGGDAHFDEDERWTDGIGIGVNFLYVATH 214
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H N D +N
Sbjct: 215 ELGHSLGLSHSSDPNAVMYPTYSKEDSKN-------------------------FKLSQD 249
Query: 187 DIVAVQKIYGAPKGS 201
DI +Q +YG S
Sbjct: 250 DINGIQLLYGKRNDS 264
>gi|323492224|ref|ZP_08097382.1| hypothetical protein VIBR0546_03560 [Vibrio brasiliensis LMG 20546]
gi|323313537|gb|EGA66643.1| hypothetical protein VIBR0546_03560 [Vibrio brasiliensis LMG 20546]
Length = 4174
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 34/65 (52%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ S S++ G N + ++++G +G+D + G ++ + G+D+ G +G+D
Sbjct: 4006 GSGSDSTLTGGSGNDLLVGGAGNDTLIGGAGDDHLEGGDGDDTLYGGLGSDILVGGTGMD 4065
Query: 306 TFFYY 310
TF +
Sbjct: 4066 TFVWD 4070
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 30/76 (39%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + T+ + + +VG +GND +IG + ++ G+D G G D
Sbjct: 4004 LDGSGSDSTLTGGSGNDLLVGGAGNDTLIGGAGDDHLEGGDGDDTLYGGLGSDILVGGTG 4063
Query: 313 SYLYKIYRFENAIIVY 328
+ ++ +
Sbjct: 4064 MDTFVWDHIDDGSLDT 4079
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 4/95 (4%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ GS + + G S N++ +GND G +G D +Y + I+
Sbjct: 4003 HLDGSGSDSTLTGGSGNDLLVGGAGNDTLIGGAGDDHL--EGGDGDDTLYGGLGSDILVG 4060
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
D + I V + ++
Sbjct: 4061 G--TGMDTFVWDHIDDGSLDTIKDFQVSEGDKIDL 4093
Score = 41.7 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 14/55 (25%)
Query: 344 LRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
L + +L A + LI G D E G DI
Sbjct: 4004 LDGSGSDSTLTGGSGNDLLVGGAGNDTLIGGAGDDHLEGGDGDDTLYGGLGSDIL 4058
>gi|222445624|ref|ZP_03608139.1| hypothetical protein METSMIALI_01264 [Methanobrevibacter smithii
DSM 2375]
gi|222435189|gb|EEE42354.1| hypothetical protein METSMIALI_01264 [Methanobrevibacter smithii
DSM 2375]
Length = 533
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 18/104 (17%)
Query: 502 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
D A ++Y +G E F Y +++D+ G H+ GY E
Sbjct: 15 DFRKAMKNYKYYGAIE--ESGLFDEKFYSKTYDDVKG----------DGLTHYLVKGYLE 62
Query: 562 GR--SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGR 603
GR S+ F+PD Y +Y D+ + HYI HG EG+
Sbjct: 63 GRLPSLDFDPDFYNNNYPDVHRA----QLNPLLHYIAHGKDEGK 102
Score = 51.3 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 16/101 (15%)
Query: 466 GKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD-AF 524
++ +G E FD Y +YDD++ G HY+ G EGR P F
Sbjct: 19 AMKNYKYYGAIE-ESGLFDEKFYSKTYDDVK-------GDGLTHYLVKGYLEGRLPSLDF 70
Query: 525 KALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
Y ++ D+ A + H+ G +EG+
Sbjct: 71 DPDFYNNNYPDVHRAQLNPLL-------HYIAHGKDEGKIF 104
Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 18/103 (17%)
Query: 418 DRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
D A ++Y +G E F Y +++D+ G H+ G E
Sbjct: 15 DFRKAMKNYKYYGAIE--ESGLFDEKFYSKTYDDV----------KGDGLTHYLVKGYLE 62
Query: 478 GRFV--TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
GR FD Y +Y D+ + HYI HG EG
Sbjct: 63 GRLPSLDFDPDFYNNNYPDVHRAQLN----PLLHYIAHGKDEG 101
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 14/83 (16%)
Query: 355 NVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGR--DITFDSYLYLGSYDDLR 412
+ Y+ +Y+D+ + + H+ G EGR + FD Y +Y D+
Sbjct: 32 SGLFDEKF-YSKTYDDVKG-------DGLTHYLVKGYLEGRLPSLDFDPDFYNNNYPDVH 83
Query: 413 NVFGSDRGAAARHYITHGVKEGR 435
+ HYI HG EG+
Sbjct: 84 RA----QLNPLLHYIAHGKDEGK 102
>gi|194678314|ref|XP_609577.4| PREDICTED: matrix metalloproteinase 25 [Bos taurus]
gi|297490016|ref|XP_002697915.1| PREDICTED: matrix metalloproteinase 25 preproprotein-like [Bos
taurus]
gi|296473539|gb|DAA15654.1| matrix metalloproteinase 25 preproprotein-like [Bos taurus]
Length = 674
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 61/201 (30%), Gaps = 52/201 (25%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNA-QEVARWALGEWSKVVDLTFEETSIH 76
L W + ++ + + L+ + + AL W DL F+E
Sbjct: 223 LSGSVWKKRTLTWRVNSFPQG------SGLSQETVRTLMHHALTTWGAESDLRFQEVGSQ 276
Query: 77 S----DIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYG--IG 115
DI + P + +FD + W +G G
Sbjct: 277 GPTEPDILIDFARAYHQDSYPFDGQGGTLAHAFFPGEHP-ISGDTHFDDEETWTFGSKDG 335
Query: 116 KGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDA 175
+GT L A+HE GHALGL H S S+M F A
Sbjct: 336 EGTDLFAVAVHEFGHALGLGHS-------------------SAPDSIMRPFYQGPVGNPA 376
Query: 176 SFGYCATPMVSDIVAVQKIYG 196
+ D +Q++YG
Sbjct: 377 EYRLSQ----DDREGLQQLYG 393
>gi|329847990|ref|ZP_08263018.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
gi|328843053|gb|EGF92622.1| hemolysin-type calcium-binding repeat 2 copies family protein
[Asticcacaulis biprosthecum C19]
Length = 1860
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/351 (14%), Positives = 91/351 (25%), Gaps = 23/351 (6%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESS 293
T G N + N ++ S I + ++ T T +S+ G D +IG N+
Sbjct: 44 TASGTFANALLYNGDTGSLIENFNRDDTFTGGTGDDSLTSGGGWDTLIGGDGNDTLSGGD 103
Query: 294 GNDVFDGSSGLDTFFYY-----------------APSYLYKIYRFENAIIVYDANEHKQD 336
GND G +G D + I + ++
Sbjct: 104 GNDELFGGNGNDRLVDDAGGAGMTGGAGNDTYWVFSGNIVTITENAAEGTDEVSVDYNYA 163
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
+VE LR + + ++ L + G D F ++ G D
Sbjct: 164 LPDNVEILRMSGNAYNGYGNASDNVFFGGNRDNHLYGMAGNDAFFGVEGADTLDGGTGND 223
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
+D+ + Y E S LI +
Sbjct: 224 SYTIRNDGDVIVEDVNAGTDLVTTIGSFDYTLSANLENLTLGGAGTGLGNESANVLIGSN 283
Query: 457 ADAPDLVQVGKDHFSNF-GCEEGRFVTFDSYLYLGSYDDL----RNVFGSDRGAAARHYI 511
D G D G + + Y ++ + + G+D A
Sbjct: 284 LDNFLGGLGGNDRLDGGAGGNDTLSGGQGNDSYYVNHLTVSVSESSGAGTDEVFATLSLS 343
Query: 512 THGVKEGRNPDAFKALEYIASHED-LINAFADAPDLVQAGKDHFSNFGYEE 561
E A S + +I + G D + G +
Sbjct: 344 LAAEVENLTLMAGDINGTGNSLSNRIIGSEGHNALDGAGGTDTLTGEGGND 394
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 75/292 (25%), Gaps = 20/292 (6%)
Query: 237 GGVKNYIDLNTE-SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGN 295
V + +LN+ SIGG + N +A + ++V+ G+D V G N+ G+
Sbjct: 870 TTVTAFENLNSGSGNDSIGGTDGNNVLASNGGADTVLAGLGHDSVTGGDGNDWLDGGDGD 929
Query: 296 DVFDGSSGLDTFFYYAPSYLYKIYRFENA--------------IIVYDANEHKQDFLSDV 341
+ G +G DT Y + + +V A + + ++
Sbjct: 930 NTIVGGTGNDTLVGTINGYNVVLDGGDGYDLVDVSPYNGDYIIDLVTGATGFGGEAIVNM 989
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-- 399
E L + + + ++ G D+ + D F
Sbjct: 990 EALVSGGGNDHITGNAAANQISVNGGNDTVLAGAGADLVTGGDGIDQLFGEGDDDSLFGL 1049
Query: 400 ---DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
D +D + G D + +G + + L
Sbjct: 1050 DGADDLYGGTGHDTIYGGSGDDTVTVNDGDDGYDTVDGEDGIDMLEASGLTYGLTLNMVD 1109
Query: 457 ADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAAR 508
G + + V G D
Sbjct: 1110 GSTNVAAVFAGFEVVITGSGNDAVTGTAAADQIAVNAGNDTVNGGDGADLVT 1161
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/319 (13%), Positives = 88/319 (27%), Gaps = 15/319 (4%)
Query: 230 LLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVF 289
G + + + S + + G N T+A +++ G GND + G +V
Sbjct: 524 TASGDGTGNDISNLITGSASANVLSGLAGNDTLAGQDGNDTLSGGDGNDNLTGGLGIDVL 583
Query: 290 FESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQ 349
GND + SG D + + + +I+ + S++E A
Sbjct: 584 SGGLGNDTYYVESGADLVNEASNAGVDEIF-----------STVTVTLGSNIENATLAAG 632
Query: 350 CIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYD 409
+ + L ++ + + G D M+ G D + D
Sbjct: 633 GQSAFGNSLANRLTGSSGNDVFLGQDGNDTVSGMEGNDTQLGGNGSD-SLSGGDGGDFLD 691
Query: 410 DLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDH 469
+ G + Y+ + E + A ++ + ++ + + +L V +
Sbjct: 692 GGAGIDTFAGGLGSDTYVVDVIGEVVSEAADAGVDEVFANVTV-FLGGNIENLTLVAGNL 750
Query: 470 FSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
R YL D +G G + L
Sbjct: 751 GGFGNSLANRLTGSTGNDYLDGQDGNDTAYGLGGQDTLT--GGVGDDALDGGEGNDQLTG 808
Query: 530 IASHEDLINAFADAPDLVQ 548
+ D
Sbjct: 809 GLGSNQVYGGLGDDTVYAG 827
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/424 (11%), Positives = 113/424 (26%), Gaps = 16/424 (3%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDY 153
A+ G T+L+ + G+ ++G+D
Sbjct: 994 SGGGNDHITGNAAANQISVNGGNDTVLAGAGADLVTGGDGIDQLFGEGDDDSLFGLDGAD 1053
Query: 154 ENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS--DIVAVQKIYGAPKGSLGNNIYKIEV 211
+ Y D + + G V D + + + G G N +
Sbjct: 1054 DLYGGTGHDTIYGGSGDDTVTVNDGDDGYDTVDGEDGIDMLEASGLTYGLTLNMVDGSTN 1113
Query: 212 QQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESV 271
+ + G+D + G ++ G + + ++ +
Sbjct: 1114 VAAVFAGFEVVITGSGNDAVT----GTAAADQIAVNAGNDTVNGGDGADLVTGGDGVDLL 1169
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDAN 331
G +D ++G+ ++ +G+D G +G D + E I + DA+
Sbjct: 1170 FGEGADDSLLGDGGDDDLSGGAGHDTVYGGTGNDIITVADGDDGFDTVDGEGGIDMLDAS 1229
Query: 332 EHKQDFLSDVERLRFADQCI-----DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
D +++ I V ++ ++ E + G D ++ +
Sbjct: 1230 ALTYDLALNLDDGSTNVAAIFAGFEGVVTGSGNDVITGGSAAEYIETGSGNDWLDAGEGA 1289
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR--NPDAFKALE 444
D+ G G+D +A + E +
Sbjct: 1290 DTLIGGSDNDVY---VYTSGDLLVELANGGNDGVYSAYNITLAANIENVVLTGALAVSAT 1346
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRG 504
A + L + G D + ++ +V + + + S
Sbjct: 1347 GNALNNSLTGNGSFNVLDGGAGADTLTGGLGDDSYYVDSTGDNVVEANGAGSDSLFSSVT 1406
Query: 505 AAAR 508
+
Sbjct: 1407 YSLS 1410
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 58/484 (11%), Positives = 118/484 (24%), Gaps = 38/484 (7%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + S + AD G + + + L
Sbjct: 1258 TGSGNDVITGGSAAEYIETGSGNDWLDAGEGADTLIGGSDNDVYVYTSGDLLVE----LA 1313
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
+ G+ + LT ++ +++ ++ +
Sbjct: 1314 NGGNDGVYSAYNITLAANIENVVLTGALAVSATGNALNNS------------------LT 1355
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
G ++ + + DS GD++++ G + + +S G
Sbjct: 1356 GNGSFNVLDGGAGADTLTGGLGDDSYYVDSTGDNVVEANGAGSDSLFSSVT---YSLSGR 1412
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
Y + +T+ I + G+S + GNS NN GND DG SG
Sbjct: 1413 YIEFLTLTGAANI-NATGNSLAQSLTGNSGNNSLTALGGNDRLDGGSGGADTLIGGSGDD 1471
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
+ I E S + A+ ++ + LI
Sbjct: 1472 TYVITTAGDTITEVLGEGSDLVESAITYTLGAEVERLTLTGSANISGTGNGLHNVLIGNA 1531
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGR 435
G + + + D ++ +D + + ++
Sbjct: 1532 GNNTLSGGDGNDTYYIQNAADQVSEASN--AGFDTVISSVTYSLAGKQAEVLSLTGSANL 1589
Query: 436 NPDAFKALEYIASHED---LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSY 492
N L + + L G D + V +
Sbjct: 1590 NATGNGLLNVLNGNSGSNVLDAGAGHDSLNGGAGADTMIGGTGNDSYSVDDAGDIISE-- 1647
Query: 493 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL--EYIASHEDLINAFADAPDLVQAG 550
G++ A+ Y E + A + L A AG
Sbjct: 1648 ---LAGGGAELVYASVTYTLSAEVEALILTGLTTIDGTGNAGNNTLTGNSAKNVLAGGAG 1704
Query: 551 KDHF 554
D +
Sbjct: 1705 NDTY 1708
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 67/562 (11%), Positives = 139/562 (24%), Gaps = 85/562 (15%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
I + + + + D G + S+ + LG
Sbjct: 853 TGAISLNLATGVNSFAATTVTAFENLNSGSGNDSIGGTDGNNVLASNGGADTVLAGLGHD 912
Query: 136 H--PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQK 193
G N DN + +++ + ++D GY D+V V
Sbjct: 913 SVTGGDGNDWLDGGDGDNTIVGGTGNDTLVGTINGYNVVLDGGDGY-------DLVDVSP 965
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSI 253
G L + ++ + GG+D + + ++
Sbjct: 966 YNGDYIIDLVTGATGFG--GEAIVNMEALVSGGGNDHITGNAAANQISV----NGGNDTV 1019
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ I+ + G +D + G + + +G+D G SG DT
Sbjct: 1020 LAGAGADLVTGGDGIDQLFGEGDDDSLFGLDGADDLYGGTGHDTIYGGSGDDTVTVNDGD 1079
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSD-----VERLRFADQCIDSVNVKQRSILEYTASY 368
Y E+ I + +A+ + + + TA+
Sbjct: 1080 DGYDTVDGEDGIDMLEASGLTYGLTLNMVDGSTNVAAVFAGFEVVITGSGNDAVTGTAAA 1139
Query: 369 EDLIQVIGQDVFESMKHFYEFGLSEGRDITFD----------------------SYLYLG 406
+ + G D +G D+ F +Y G
Sbjct: 1140 DQIAVNAGNDTVNGGDGADLVTGGDGVDLLFGEGADDSLLGDGGDDDLSGGAGHDTVYGG 1199
Query: 407 SYDDLRNVFGSD-----------RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
+ +D+ V D +T+ + + + A E ++
Sbjct: 1200 TGNDIITVADGDDGFDTVDGEGGIDMLDASALTYDLALNLDDGSTNVAAIFAGFEGVVTG 1259
Query: 456 FADAPDLVQVGKDH---------FSNFGCEEGRFVTFDSYLYLGSYDDLR---NVFGSDR 503
+ ++ + D+ +Y+ + DL G+D
Sbjct: 1260 SGNDVITGGSAAEYIETGSGNDWLDAGEGADTLIGGSDNDVYVYTSGDLLVELANGGNDG 1319
Query: 504 GAAARHYITHGVKEGRNPDA--------------------FKALEYIASHEDLINAFADA 543
+A + E F L+ A + L D
Sbjct: 1320 VYSAYNITLAANIENVVLTGALAVSATGNALNNSLTGNGSFNVLDGGAGADTLTGGLGDD 1379
Query: 544 PDLVQAGKDHFSNFGYEEGRSI 565
V + D+ S+
Sbjct: 1380 SYYVDSTGDNVVEANGAGSDSL 1401
Score = 41.7 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 45/357 (12%), Positives = 91/357 (25%), Gaps = 37/357 (10%)
Query: 33 DVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTP 92
D ITE+ ++ A+ + E ++ + NG
Sbjct: 1471 DTYVITTAGDTITEVLGEGSDLVESAITY---TLGAEVERLTLTGSANISGTGNGLHNV- 1526
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
I + G G T NA ++ A N G+
Sbjct: 1527 --------LIGNAGNNTLSGGDGNDTYYIQNAADQVSEA--------SNAGFDTVISSVT 1570
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
Y V+S + + + + GS +
Sbjct: 1571 YSLAGKQAEVLSLTGSANLNATGNG-------------LLNVLNGNSGSNVLDAGAGHDS 1617
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
T+ G+D + + I + + T++ +
Sbjct: 1618 LNGGAGADTMIGGTGNDSYSVD---DAGDIISELAGGGAELVYASVTYTLSAEVEALILT 1674
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
G + D GN+ NN +S +V G +G DT++ + + ++Y
Sbjct: 1675 GLTTIDG-TGNAGNNTLTGNSAKNVLAGGAGNDTYYIQTTTDNVVELSGQGTDLIYSTVT 1733
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF 389
+ + + + + + L + G+DV F
Sbjct: 1734 YSLNGRYAETLILTGSANVSATGNSLGNTLTGNDGINTINGKGGKDVLAGGLGADIF 1790
Score = 40.5 bits (93), Expect = 0.80, Method: Composition-based stats.
Identities = 34/326 (10%), Positives = 73/326 (22%), Gaps = 3/326 (0%)
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
G +D + D++ + V GA N
Sbjct: 73 TGGTGDDSLTSGGGWDTLIGGDGNDTLSGGDGNDELFGGNGNDRLVDDAGGAGMTGGAGN 132
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+ + + +D I + + + G +
Sbjct: 133 DTYWVFSGNIVTITENAAEGTDEVSVDYNYALPDNVEILRMSGNAYNGYGNASDNVFFGG 192
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ G +GND G + +GND + + D + + +
Sbjct: 193 NRDNHLYGMAGNDAFFGVEGADTLDGGTGNDSYTIRNDGDVIVEDVNAGTDLVTTIGSFD 252
Query: 326 IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI-GQDVFESMK 384
AN + + + L + L G D +
Sbjct: 253 YTLSANLENLTLGGAG-TGLGNESANVLIGSNLDNFLGGLGGNDRLDGGAGGNDTLSGGQ 311
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
+ ++ ++ G+ + + S + G G +
Sbjct: 312 GNDSYYVNH-LTVSVSESSGAGTDEVFATLSLSLAAEVENLTLMAGDINGTGNSLSNRII 370
Query: 445 YIASHEDLINAFADAPDLVQVGKDHF 470
H L A + G D +
Sbjct: 371 GSEGHNALDGAGGTDTLTGEGGNDTY 396
>gi|296114326|ref|ZP_06832980.1| hypothetical protein GXY_01048 [Gluconacetobacter hansenii ATCC
23769]
gi|295979087|gb|EFG85811.1| hypothetical protein GXY_01048 [Gluconacetobacter hansenii ATCC
23769]
Length = 142
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 6/96 (6%)
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT---FDSYL 487
+ E F Y+ ++ D+ A ++ G +HF G EGR FD
Sbjct: 29 LSEYLKSLPFDEQAYLQTNPDVDAAV--HRGEIKSGHEHFLYTGFFEGRDTGGNEFDEKW 86
Query: 488 YLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRNPD 522
YL + D+ D H+ G E R P
Sbjct: 87 YLKNNPDVVASVRRGDWTTGKEHWQAVGRAELRAPS 122
Score = 61.0 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 523 AFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI---TFNPDLYLTSYDDL 579
F Y+ ++ D+ A +++G +HF G+ EGR F+ YL + D+
Sbjct: 37 PFDEQAYLQTNPDVDAAV--HRGEIKSGHEHFLYTGFFEGRDTGGNEFDEKWYLKNNPDV 94
Query: 580 WNVF-GSDRSAAAQHYITHGMKEGRA 604
D + +H+ G E RA
Sbjct: 95 VASVRRGDWTTGKEHWQAVGRAELRA 120
Score = 59.0 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Query: 483 FDSYLYLGSYDDLRNVF-GSDRGAAARHYITHGVKEGRN--PDAFKALEYIASHEDLINA 539
FD YL + D+ + + H++ G EGR+ + F Y+ ++ D++ +
Sbjct: 38 FDEQAYLQTNPDVDAAVHRGEIKSGHEHFLYTGFFEGRDTGGNEFDEKWYLKNNPDVVAS 97
Query: 540 FADAPDLVQAGKDHFSNFGYEEGRSIT 566
GK+H+ G E R+ +
Sbjct: 98 VR--RGDWTTGKEHWQAVGRAELRAPS 122
Score = 46.3 bits (108), Expect = 0.015, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 27/85 (31%), Gaps = 4/85 (4%)
Query: 358 QRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT---FDSYLYLGSYDDLRNV 414
+ + V ++ +HF G EGRD FD YL + D+
Sbjct: 38 FDEQAYLQTNPDVDAAVHRGEIKSGHEHFLYTGFFEGRDTGGNEFDEKWYLKNNPDVVAS 97
Query: 415 F-GSDRGAAARHYITHGVKEGRNPD 438
D H+ G E R P
Sbjct: 98 VRRGDWTTGKEHWQAVGRAELRAPS 122
Score = 42.1 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 4/84 (4%)
Query: 563 RSITFNPDLYLTSYDDLWNVFGSDRSA-AAQHYITHGMKEGRALGISGMQFKSVMNLSEK 621
+S+ F+ YL + D+ +H++ G EGR G G +F L
Sbjct: 34 KSLPFDEQAYLQTNPDVDAAVHRGEIKSGHEHFLYTGFFEGRDTG--GNEFDEKWYLKNN 91
Query: 622 SRDKADLSLSFDHKKVDLYTDYFG 645
A + D + G
Sbjct: 92 PDVVASVR-RGDWTTGKEHWQAVG 114
>gi|237801266|ref|ZP_04589727.1| hemolysin-type calcium-binding region:hemolysin-type calcium
binding related protein [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024125|gb|EGI04182.1| hemolysin-type calcium-binding region:hemolysin-type calcium
binding related protein [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 634
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 69/571 (12%), Positives = 137/571 (23%), Gaps = 111/571 (19%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
+ S D+ G G ++ G+ + +
Sbjct: 2 GDTTATLINGQSGDDWLYGTSGNDILDGGAGNDSLSGQFGNDTYLFYRGMGQDTVTDFDW 61
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
V + D+ + D ++ Y + +D ++V
Sbjct: 62 TVGNI------DTIKVAADIAPADVMVSRDGNYLYLSIKGTTDKMSVTLFNNINYQVE-- 113
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + ++T+ D D L G V + + G E + ++
Sbjct: 114 RVEFADGTVWGVDTLKTMTRGVASDAADT-LYGDVGADVLDGLNGNDKLYGEEGDDLLSG 172
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS---------GLDTFFYYAPSYL 315
+ + G +GND + G + ++ G+D+ DG + G DT+ +Y
Sbjct: 173 GGGNDWLYGGAGNDTLNGGAGDDSLSGDVGDDILDGGAGNDYLSGYTGNDTYLFYRGMGQ 232
Query: 316 YKIYRFEN---------------------------------AIIVYDANEHKQDFLSDVE 342
I ++ + D + +E
Sbjct: 233 DTITEYDTTVGNVDIIKVAADIAPDDVVVKQERSDLYLSIKGTTDWMKIYSYTDPGAQIE 292
Query: 343 RLRFADQCI----------------------------DSVNVKQRSILEYTASYEDLIQV 374
R+ FAD + + + A + L+
Sbjct: 293 RVEFADGTVWSPTDLKRLSQVVASEVADTLYGDETSEQLDGLGGNDQIYGLAGNDVLLGG 352
Query: 375 IGQDVFESMKHFYEFGLSEGR--------------------DITFDSYLYLGSYDDLRNV 414
G D+ + G D+ FDS G+ D ++
Sbjct: 353 AGDDMLDGGMGRDTLDGGAGNDSLYGGTDNDTYLFQRGGGQDVIFDSDWTAGNIDTIKLA 412
Query: 415 FGSDRG----AAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHF 470
G + + + + + Y A + FAD
Sbjct: 413 SGIASTDIKASRTGDNLELAIIGTSDKITVRDWFYSADSQVEQVQFADGTLWDVATLKAM 472
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 530
EG V D+ + G + Y G L
Sbjct: 473 VKGVASEGNDV--------LQGDESVADILNGLGGDDKLYGLSGNDTLNGGAGKDTLYGG 524
Query: 531 ASHEDLINAFADAPDLVQAGKDHFSNFGYEE 561
A + L + AG D + +
Sbjct: 525 AGADTLDGGAGNDSLYGDAGNDTYLFYRGAG 555
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 91/272 (33%), Gaps = 9/272 (3%)
Query: 59 LGEWSKVVDLTFEETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGT 118
L S+VV +T + G + + + D+ G+G+ T
Sbjct: 307 LKRLSQVVASEVADTLYGDETSEQLDGLGGNDQIYGLAGNDVLLGGAGDDMLDGGMGRDT 366
Query: 119 ILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG 178
+ + + G D DS T+ + S + ++
Sbjct: 367 LDGGAGNDSLYGG------TDNDTYLFQRGGGQDVIFDSDWTAGNIDTIKLASGIASTDI 420
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQ-TIYDSGGDDLLDLTLIG 237
+ D + + I + K ++ + Y + Q + F T++D + +
Sbjct: 421 KAS--RTGDNLELAIIGTSDKITVRDWFYSADSQVEQVQFADGTLWDVATLKAMVKGVAS 478
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
+ + + + G + + + +++ G +G D + G + + +GND
Sbjct: 479 EGNDVLQGDESVADILNGLGGDDKLYGLSGNDTLNGGAGKDTLYGGAGADTLDGGAGNDS 538
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
G +G DT+ +Y + I +++ D
Sbjct: 539 LYGDAGNDTYLFYRGAGQDWISDYDSTAGNLD 570
>gi|148557446|ref|YP_001265028.1| glycoside hydrolase family protein [Sphingomonas wittichii RW1]
gi|148502636|gb|ABQ70890.1| glycoside hydrolase, family 16 [Sphingomonas wittichii RW1]
Length = 686
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 60/203 (29%), Gaps = 11/203 (5%)
Query: 142 GGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
+ DY+ D +S AS D +Q GA
Sbjct: 402 TSGTTGSLLADYKIDYVRAYALSELPSAPGQAPASDDMLTGTAGHDD--IQGGAGADTIH 459
Query: 202 --LGNNIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSI 253
GN+ + I G D L D G + I+ + SI
Sbjct: 460 GGAGNDHLYGQSPYGGPDGADLIDGGDGSDYLQGNAGNDTLDGGNGSDRINGGAD-DDSI 518
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G E N +I + + V G GND + G N+ GND+ G G D A
Sbjct: 519 RGGEGNDSINGNLGNDHVDGGIGNDYLRGGQGNDTLIGGDGNDILSGDLGADLLTGGAGI 578
Query: 314 YLYKIYRFENAIIVYDANEHKQD 336
+ + + D QD
Sbjct: 579 DRFVFAGSGSTLAAPDRIADFQD 601
Score = 50.2 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 23/201 (11%), Positives = 44/201 (21%), Gaps = 31/201 (15%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
+ +D++ G + ++ +G D G +G D + +P
Sbjct: 433 APASDDMLTGTAGHDDIQGGAGADTIHGGAGNDHLYGQSPYGG----------------- 475
Query: 333 HKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
D L+ A + L G D
Sbjct: 476 --------------PDGADLIDGGDGSDYLQGNAGNDTLDGGNGSDRINGGADDDSIRGG 521
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
EG D + + N + G L A +
Sbjct: 522 EGNDSINGNLGNDHVDGGIGNDYLRGGQGNDTLIGGDGNDILSGDLGADLLTGGAGIDRF 581
Query: 453 INAFADAPDLVQVGKDHFSNF 473
+ A + + F +
Sbjct: 582 VFAGSGSTLAAPDRIADFQDG 602
Score = 38.2 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 272 VGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
VG++ + ++GN +N G+D G G D F + A S + F+
Sbjct: 60 VGNALANRIVGNGESNQLEGRGGSDTLTGGGGSDVFIFGAGSGNDVVNDFKPG 112
>gi|225075233|ref|ZP_03718432.1| hypothetical protein NEIFLAOT_00233 [Neisseria flavescens
NRL30031/H210]
gi|224953408|gb|EEG34617.1| hypothetical protein NEIFLAOT_00233 [Neisseria flavescens
NRL30031/H210]
Length = 326
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 41/144 (28%), Gaps = 17/144 (11%)
Query: 200 GSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYE 257
+ IY E IY G+D + G E + G
Sbjct: 110 TDAKDTIYGTACEDIIYGGNGTDVIYAGAGNDTI----YGDADGDSLYGEEGKDYLQGGA 165
Query: 258 KNMTIAQH-----------TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
N + + G +G+D ++G N+ GND+ G +G DT
Sbjct: 166 GNDYLNGTGNSLNNNIEGNGGNNHLYGLAGDDCLVGKDGNDYLDGGVGNDILIGGTGNDT 225
Query: 307 FFYYAPSYLYKIYRFENAIIVYDA 330
+F+ I +
Sbjct: 226 YFFDKGYGHDTIREESGNDTLLFG 249
Score = 58.3 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 58/194 (29%), Gaps = 19/194 (9%)
Query: 229 DLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNV 288
D +D + D N + + I +++ G++ D++ G + +V
Sbjct: 74 DCVDDHNQNSSYGHEDKNPGNVIRAEDCKDGNVIRGTDAKDTIYGTACEDIIYGGNGTDV 133
Query: 289 FFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+ +GND G + D+ + Y D+L+
Sbjct: 134 IYAGAGNDTIYGDADGDSLY-------------GEEGKDYLQGGAGNDYLNG----TGNS 176
Query: 349 QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSY 408
+ + L A + L+ G D + G D F Y +
Sbjct: 177 LNNNIEGNGGNNHLYGLAGDDCLVGKDGNDYLDGGVGNDILIGGTGNDTYFFDKGYG--H 234
Query: 409 DDLRNVFGSDRGAA 422
D +R G+D
Sbjct: 235 DTIREESGNDTLLF 248
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/202 (14%), Positives = 52/202 (25%), Gaps = 12/202 (5%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
T++ +I G I + + +GND + G++ + + G D G +G D
Sbjct: 109 GTDAKDTIYGTACEDIIYGGNGTDVIYAGAGNDTIYGDADGDSLYGEEGKDYLQGGAGND 168
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYT 365
+ N + D L D IL
Sbjct: 169 --YLNGTGNSLNNNIEGNGGNNHLYGLAGDDCLVG------KDGNDYLDGGVGNDILIGG 220
Query: 366 ASYED--LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAA 423
+ + G D +G + L S +L G++
Sbjct: 221 TGNDTYFFDKGYGHDTIREESGNDTLLFGKG--VAASDVLLSKSGANLTVSVGTNDSITI 278
Query: 424 RHYITHGVKEGRNPDAFKALEY 445
+ T + N Y
Sbjct: 279 DDWFTGNNHKVENFKFADGSTY 300
>gi|311270531|ref|XP_001925199.2| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-17 [Sus
scrofa]
Length = 592
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 47/136 (34%), Gaps = 32/136 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW----ALGEWSKVVDLTFEETS-IHS 77
W+ + ++ +P ++ R AL WS + L F E + +
Sbjct: 128 WNKRNLSWRVRTFPRD---------SPLGRDTVRALMHYALKVWSDITPLNFHEVAGSTA 178
Query: 78 DIKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGK--GTIL 120
DI+ S + P D + +FD + W + G L
Sbjct: 179 DIQIDFSTADHNDRYPFDGPGGTVAHAFFP-GDHHTAGDTHFDDDEAWTFRSSDAHGMDL 237
Query: 121 SHNALHEIGHALGLMH 136
A+HE GHA+GL H
Sbjct: 238 FAVAVHEFGHAIGLSH 253
>gi|197105012|ref|YP_002130389.1| hypothetical protein PHZ_c1549 [Phenylobacterium zucineum HLK1]
gi|196478432|gb|ACG77960.1| hypothetical protein PHZ_c1549 [Phenylobacterium zucineum HLK1]
Length = 437
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 1/98 (1%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
GD+ + + I +I G + + +++ G +G D + G +
Sbjct: 265 GDNKSNTLTGDSGPDTI-WGWNGEDTIAGDRGDDWLDGDNGKDNLSGGAGADTLWGGNGK 323
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ +G+D G G D F + S I+ F++
Sbjct: 324 DTLVGGAGDDKLFGGLGEDHFIFDQGSGRDVIFDFQSG 361
>gi|158334487|ref|YP_001515659.1| hypothetical protein AM1_1311 [Acaryochloris marina MBIC11017]
gi|158304728|gb|ABW26345.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 418
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANE 332
S N + GN +N ++G++V DG +G D Y Y + + I
Sbjct: 335 TGSNNANLRGNDQDNQLGGNTGDNVIDGLAGYDVVLYPRRKNEYTVSNNPDGTIKVVG-- 392
Query: 333 HKQDFLSDVERLRFADQCIDSVN 355
D L ++E ++F D I
Sbjct: 393 DGTDTLVNIEEIKFIDGNILGSG 415
>gi|281341728|gb|EFB17312.1| hypothetical protein PANDA_010999 [Ailuropoda melanoleuca]
Length = 224
Score = 61.7 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 58/190 (30%), Gaps = 50/190 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W + + Y+ T + +L AL WS+ + L+F + +DI
Sbjct: 69 WVSSVVTYRIVSYTPDLPRVRVNQL-------VAKALAMWSQEIPLSFRRVLAGTADIMI 121
Query: 82 IS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ + P + +FD+ + W G G A H
Sbjct: 122 SFARGAHGDYNPFDGPGNTLAHAFAP--GPGLGGDAHFDEDEHWTDGSRTGVNFLITATH 179
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H N + P++
Sbjct: 180 ELGHSLGLGHSSDPNA---------------VMYPAYRVGDPKN----------FKLAPD 214
Query: 187 DIVAVQKIYG 196
DI ++K+YG
Sbjct: 215 DIKGIRKLYG 224
>gi|296216053|ref|XP_002754399.1| PREDICTED: collagenase 3 [Callithrix jacchus]
Length = 471
Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 61/196 (31%), Gaps = 49/196 (25%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHS 77
R WS + Y+ T ++ ++ R A WS V L F +
Sbjct: 109 RTLKWSKTNLTYRIVNYTPDMTHSEV-------EKAFRKAFKVWSDVTPLNFTRLHDGTA 161
Query: 78 DIKFISS-----NNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHNA 124
DI + P Y + +FD + W KG L A
Sbjct: 162 DIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT-SSSKGYNLFLVA 220
Query: 125 LHEIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
HE+GH+LGL H +P+Y + S+FM D
Sbjct: 221 AHELGHSLGLDHSKDPGALMFPIYT-----------YTGKSHFMLPD------------- 256
Query: 184 MVSDIVAVQKIYGAPK 199
D+ +Q +YG
Sbjct: 257 --DDVQGIQFLYGPGD 270
>gi|311255637|ref|XP_003126306.1| PREDICTED: matrix metalloproteinase-19-like [Sus scrofa]
Length = 540
Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 48/158 (30%), Gaps = 38/158 (24%)
Query: 51 AQEVARWALGEWSKVVDLTFEETSIH-SDIKFISSNNGYVCTPRYDSRYF---------- 99
A+ A WS V LTF E +DI+
Sbjct: 126 ARAALLQAFQYWSNVAPLTFREVKAGWADIRLSFHGRQSPYCSNNFDGPGRVLAHADIPE 185
Query: 100 -MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
++FD+ ++W +G L A HE+GHALGL H
Sbjct: 186 LGSVHFDEDELWTERSYRGVNLRIIAAHELGHALGLGH---------------------- 223
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
Y + + A + D+ +Q +YG
Sbjct: 224 ----SRYTQALMAPVYAGYRPHFKLHPDDVAGIQALYG 257
>gi|307592009|ref|YP_003899600.1| hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
gi|306985654|gb|ADN17534.1| Hemolysin-type calcium-binding region [Cyanothece sp. PCC 7822]
Length = 3046
Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/362 (14%), Positives = 96/362 (26%), Gaps = 68/362 (18%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVI 281
I GDD + + + LN + G N I ++++G + I
Sbjct: 2564 ILGGNGDDTILIRTTTDPLSGKTLNH----YVEGGAGNDRITSSIGNDTIIGGVSSINPI 2619
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
N++ GND+ G +G +I + +I+ E L
Sbjct: 2620 AADGNDIIVGGGGNDLIFGDNG-------------RILQNGQTVIILQTGEAINTRL--- 2663
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
E + +D ++ + ++ IG D + G DI F
Sbjct: 2664 ETIATSDG--------GNDVIFVGGGNDTVMGGIGNDHISGADNNA------GEDIIFGD 2709
Query: 402 Y---LYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
YLG + R Y G +E E + +
Sbjct: 2710 NGQIDYLGQNLQEIKSIDAINSGNDRIYAKLGNDIVIGGGGDDYIEAGKKDESIEGIDGE 2769
Query: 459 APDLVQVGKDHF--------------------SNFGCEEGRFVTFDSYLY--------LG 490
G+ F + G + V F+ +
Sbjct: 2770 DIIFGDHGRIEFDDHGPIKYGQKQITHLISTDFDHGGNDTIDVGFNKDFAAGGGGNDQIL 2829
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
+ D +F D+G I D ++ ++ L+ + G
Sbjct: 2830 NQGDDDEIFFGDQGEVKADLIVSLSA---TTDGDDLIQGAGGNDSLLAGGGNDNVEGVEG 2886
Query: 551 KD 552
+D
Sbjct: 2887 ED 2888
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 66/249 (26%), Gaps = 33/249 (13%)
Query: 216 SPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIES----- 270
+ I T +D GG+D +D+ G I + I E
Sbjct: 2795 THLISTDFDHGGNDTIDV----GFNKDFAAGGGGNDQILNQGDDDEIFFGDQGEVKADLI 2850
Query: 271 ---VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIV 327
+ G+D++ G N+ GND +G G D F I
Sbjct: 2851 VSLSATTDGDDLIQGAGGNDSLLAGGGNDNVEGVEGEDIIFGDHGRIESVNNIVTRLIST 2910
Query: 328 YDANEHKQDFLSDVER-LRFADQCIDSVNVKQR---SILEY----------------TAS 367
AN + E+ + F D + I+
Sbjct: 2911 DFANGGNDQIAAGTEKDIVFGGAKNDIITNNDDNSPDIIYGDQGYWEANLISNVSDKNDG 2970
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITF-DSYLYLGSYDDLRNVFGSDRGAAARHY 426
+ + G D+ + DI F D + + + + S+ +
Sbjct: 2971 NDRIFSEGGDDIILAGGAKDYVESGNNLDIIFGDHGIVTRQNNVIIRIETSESKSGDNDT 3030
Query: 427 ITHGVKEGR 435
+ G +
Sbjct: 3031 LLAGNDDDT 3039
>gi|126208472|ref|YP_001053697.1| RTX toxin protein [Actinobacillus pleuropneumoniae L20]
gi|126097264|gb|ABN74092.1| RTX toxin protein [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
Length = 1951
Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/350 (14%), Positives = 91/350 (26%), Gaps = 66/350 (18%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + +GND + G+ ++ +GND+ GS G DT+ +
Sbjct: 1499 LFGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYLFSKG 1558
Query: 313 SYLYKIYRFEN--------------------------AIIVYDANEHKQDFLS------- 339
IY + + + H D ++
Sbjct: 1559 HGQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVGDDLMLFGYHDTDSVTVKSFYDH 1618
Query: 340 ---DVERLRFADQCID----------SVNVKQRSILEYTASYED-LIQVIGQDVFESMKH 385
E+L FAD+ I + A ++ L G D+
Sbjct: 1619 EYYQFEKLEFADRSISRDELIKAGLHLYGTDGNDEINDHADWDSILEGGKGNDILRGSYG 1678
Query: 386 FYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 445
+ S+G + Y D N VK R + Y
Sbjct: 1679 ADTYIFSKGH-----GQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVDNDLMLFGY 1733
Query: 446 IASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGA 505
+ I +F + F + R +T D +FG+D
Sbjct: 1734 HDTDSVTIKSFYNH------VDYQFDKLEFAD-RSITRDELG-----KQGMALFGTDGDD 1781
Query: 506 AARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ + + + LI + G D +
Sbjct: 1782 NINDWGRN--SVIDAGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYI 1829
Score = 57.9 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 59/382 (15%), Positives = 115/382 (30%), Gaps = 70/382 (18%)
Query: 270 SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
+ G N++++G+ +N S+G+D+ G G DT + Y + ++Y+
Sbjct: 1086 DLKGDEKNNILLGSQKDNNLSGSAGDDLLIGGEGNDTLKGSYGADTYLFSKGHGQDVIYE 1145
Query: 330 ANE-----------------------------------HKQDFLS----------DVERL 344
++ H D ++ E+L
Sbjct: 1146 YSDSANSKSDIDTLKFTDVNYAEVKFRRVGDDLMLFGYHDTDSVTVKSFYNHEYYQFEKL 1205
Query: 345 RFADQCIDSVNVKQRSI-LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
FAD+ I + ++ + L T +D+ V ++ S G D
Sbjct: 1206 EFADRSITRDELGKQGMALFGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTG 1265
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
D L+ +G+D ++ + + E + K D+ A
Sbjct: 1266 ----NDILKGSYGADTYLFSKGHGQDVIYEYSDSANSKRDIDTLKFTDVNYA----EVKF 1317
Query: 464 QVGKDHFSNFGCEEGRFVT----FDSYLY---LGSYDDLRNVFGSDRGAAARHYITHGVK 516
+ D FG + VT +D Y + D A Y T G
Sbjct: 1318 RRVGDDLMLFGYHDTDSVTVKSFYDHEYYQFEKLEFADRSISRDELIKAGLHLYGTDGND 1377
Query: 517 EGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSY 576
E + + ++ L + G D + F G+ + + S
Sbjct: 1378 EINDHADWDSI--------LEGGKGNDILRGSYGADTYI-FSKGHGQDVIYEYSDSANSK 1428
Query: 577 DDLWNVFGSDRSAAAQHYITHG 598
D+ + +D + A + G
Sbjct: 1429 RDIDTLKFTDVNYAEVKFRRVG 1450
Score = 57.5 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 71/575 (12%), Positives = 148/575 (25%), Gaps = 97/575 (16%)
Query: 66 VDLTFEETSI---HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ F E++ + + + I + D + G T L
Sbjct: 1077 AGVIFAESTDLKGDEKNNILLGSQKDNNLSGSAGD-DLLIGGEGNDTLKGSYGADTYLFS 1135
Query: 123 NALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCAT 182
G ++ + D+ + ++Y +
Sbjct: 1136 KG------------HGQDVIYEYSDSANSKSDIDTLKFTDVNYAEVKFR----------- 1172
Query: 183 PMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNY 242
V D + + +G + ++ D G +
Sbjct: 1173 -RVGDDLML---FGYHDTDSVTVKSFYNHEYYQFEKLEF------ADRSITRDELGKQGM 1222
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF--DG 300
T+ I + +N I +++ GS G+D +IG + N++ S G D +
Sbjct: 1223 ALFGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYLFSK 1282
Query: 301 SSGLDTFFYYAPSYLY--------------------------KIYRFENAIIVYDANEHK 334
G D + Y+ S ++ + + V + +
Sbjct: 1283 GHGQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVGDDLMLFGYHDTDSVTVKSFYD 1342
Query: 335 QDFLSDVERLRFADQCID----------SVNVKQRSILEYTASYED-LIQVIGQDVFESM 383
++ E+L FAD+ I + A ++ L G D+
Sbjct: 1343 HEYYQ-FEKLEFADRSISRDELIKAGLHLYGTDGNDEINDHADWDSILEGGKGNDILRGS 1401
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ S+G + Y D N S R + E + L
Sbjct: 1402 YGADTYIFSKGH-----GQDVIYEYSDSAN---SKRDIDTLKFTDVNYAEVKFRRVGDDL 1453
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
H+ D+ + + F E + +FG+D
Sbjct: 1454 MLFGYHD------TDSVTVKSFYNHEYYQFEKLEFADRSITRDELGKQG---MALFGTDG 1504
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
+ + + + LI + G D + F G+
Sbjct: 1505 DDDINDWGRN--SVIDAGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYL-FSKGHGQ 1561
Query: 564 SITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHG 598
+ + S D+ + +D + A + G
Sbjct: 1562 DVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVG 1596
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 10/96 (10%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + +GND V G + ++ GND+ G G DT+ +
Sbjct: 1774 LFGTDGDDNINDWGRNSVIDAGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYIFSKG 1833
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+Y N D++ L+F D
Sbjct: 1834 HGQDIVYEDTNNDN----------RARDIDTLKFTD 1859
Score = 53.6 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/378 (12%), Positives = 96/378 (25%), Gaps = 112/378 (29%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGK----GTILSHNALHEIGH 130
+D ++ G + D G G G+ + L GH
Sbjct: 1500 FGTDGDDDINDWGRNSVIDAGAGNDTINGSYGDDTLIGGTGNDILKGSYGADTYLFSKGH 1559
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVA 190
G ++ + D+ + ++Y +
Sbjct: 1560 -------GQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKF-------------------- 1592
Query: 191 VQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESW 250
+G+++ DS +++ YD E +
Sbjct: 1593 ---------RRVGDDLMLFGYHDTDSVTVKSFYDH----------------------EYY 1621
Query: 251 SSIGGYEKNMTIAQHTVIE---SVVGSSGNDVVIGN-SANNVFFESSGNDVFDGSSGLDT 306
+ +I++ +I+ + G+ GND + + +++ GND+ GS G DT
Sbjct: 1622 QFEKLEFADRSISRDELIKAGLHLYGTDGNDEINDHADWDSILEGGKGNDILRGSYGADT 1681
Query: 307 FFYYAPSYLYKIYRFENAIIVYDANE--------------------------HKQDFLS- 339
+ + IY + ++ + H D ++
Sbjct: 1682 YIFSKGHGQDVIYEYSDSANSKRDIDTLKFTDVNYAEVKFRRVDNDLMLFGYHDTDSVTI 1741
Query: 340 ---------DVERLRFADQCIDSV----------NVKQRSILEYTASYEDLIQVIGQDVF 380
++L FAD+ I + + G D
Sbjct: 1742 KSFYNHVDYQFDKLEFADRSITRDELGKQGMALFGTDGDDNINDWGRNSVIDAGAGNDTV 1801
Query: 381 ESMKHFYEFGLSEGRDIT 398
+G DI
Sbjct: 1802 NGGNGDDTLIGGKGNDIL 1819
>gi|73955232|ref|XP_854639.1| PREDICTED: similar to matrix metalloproteinase 20 preproprotein
[Canis familiaris]
Length = 483
Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 59/198 (29%), Gaps = 53/198 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ T + ++P + AL W V L+F + +DI
Sbjct: 117 WKKNTLTYRISKYT--------SSMSPAEVDKAVEMALQAWGSAVPLSFIRVNSGEADIM 168
Query: 81 FISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ P + +FD A+ W G+ G L A
Sbjct: 169 ISFETGDHGDSYPFDGPRGTLAHAFAP--GEGLGGDTHFDNAEKWTMGM-NGFNLFTVAA 225
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GHALGL H + + Y P F
Sbjct: 226 HEFGHALGLAHSTDP---------------SALMYPTYKYQHPY------GFHLPK---- 260
Query: 186 SDIVAVQKIYGAPKGSLG 203
D+ +Q +YG K LG
Sbjct: 261 DDVKGIQALYGPRKTLLG 278
>gi|297690073|ref|XP_002822451.1| PREDICTED: macrophage metalloelastase-like [Pongo abelii]
Length = 470
Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 57/162 (35%), Gaps = 40/162 (24%)
Query: 54 VARWALGEWSKVVDLTFEET-SIHSDIKFISSNNGYVCTPRY-------------DSRYF 99
R A WS V L F + + +DI + + + + S
Sbjct: 133 AIRKAFQVWSNVTPLKFSKIHTGVADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIG 192
Query: 100 MEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFL 159
+ +FD+ + W +GT L A+HEIGH+LGL H P + Y+
Sbjct: 193 GDAHFDEDEFWTTH-SEGTNLFLTAVHEIGHSLGLGHS-----SDPKAIMFPTYKYVDIN 246
Query: 160 TSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGS 201
T +S DI +Q +YG PK +
Sbjct: 247 TFRLS--------------------ADDIRGIQSLYGDPKEN 268
>gi|254441080|ref|ZP_05054573.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
gi|198251158|gb|EDY75473.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Octadecabacter antarcticus 307]
Length = 653
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 60/232 (25%), Gaps = 15/232 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + + S G+D L D TL G + + I + N
Sbjct: 361 TNDNTIETGSGDDVLLGSRGNDTLIACCGDDTLNAGWGDDKAFGGDGNDVINLEKGNDFA 420
Query: 263 AQHTVIESVVGSSGNDVVIGN-------SANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ V G G+DV+ G+ ++ +GND G+ G D S
Sbjct: 421 EAGLGDDVVNGGEGDDVIYGDTNVNNSLGGDDKLRGGAGNDELHGNDGND--ELNGGSGD 478
Query: 316 YKIYRFENAIIVYDANEHKQDFL-SDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
++ + + ++LR + L + + L
Sbjct: 479 DVLFGDQGNDNISGGEGDDWAAGGVGEDKLRGGAGNDELHGNDGEDYLSGGSGNDTLAGG 538
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHY 426
G D E G D + D G +
Sbjct: 539 NGVDKIVGGNGSDEIEGGAGNDNLWGGDWAADGASDTFIFEGGTGRDYVHDF 590
Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/399 (12%), Positives = 101/399 (25%), Gaps = 40/399 (10%)
Query: 73 TSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHAL 132
S + +F + G T + + + +D G G TIL+ I +
Sbjct: 176 VSFTAVEEFHITTGGGNDTIITGAGADILDSGAGSDTLDGGAGIDTILAGFGSDLIYGRI 235
Query: 133 GLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQ 192
G G + V N + + +DAS + ++I ++
Sbjct: 236 GDSIDGGEDADNSDVDVLNLNYIGLHEIVLDDHENGTVYALDASGSRIGSFSFTNIESIV 295
Query: 193 KIYGAPKG----------------------------SLGNNIYKIEVQQKDSPFIQTIYD 224
L + + + +
Sbjct: 296 GDNLVFATPEVLSTEVDAIDPEPVCLDDVDSFLVAVDLVGQEWSYLGDLWVYDATKIVQN 355
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
D D T+ G + + L + ++ + T+ + G GNDV+
Sbjct: 356 GRELDTNDNTIETGSGDDVLLGSRGNDTLIACCGDDTLNAGWGDDKAFGGDGNDVINLEK 415
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
N+ G+DV +G G D + + + + K + + L
Sbjct: 416 GNDFAEAGLGDDVVNGGEGDDVIY------------GDTNVNNSLGGDDKLRGGAGNDEL 463
Query: 345 RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLY 404
D + +L +++ G D + G D +
Sbjct: 464 HGNDGNDELNGGSGDDVLFGDQGNDNISGGEGDDWAAGGVGEDKLRGGAGNDELHGNDGE 523
Query: 405 LGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
N + + +G E L
Sbjct: 524 DYLSGGSGNDTLAGGNGVDKIVGGNGSDEIEGGAGNDNL 562
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 53/419 (12%), Positives = 101/419 (24%), Gaps = 43/419 (10%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+S I AD+ G G T+ + I G
Sbjct: 169 GDGAANIVSFTAVEEFHITTGGGNDTIITGAGADILDSGAGSDTLDGGAGIDTILAGFG- 227
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G +D + D+ V++ + T D +
Sbjct: 228 ---SDLIYGRIGDSIDGGEDADNSDVDVLNLNYIGLHEIVLDDHENGTVYALDASGSRI- 283
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G+ + +I + + T D+ + + L + +DL + WS +G
Sbjct: 284 -GSFSFTNIESIVGDNLVFATPEVLSTEVDAIDPEPVCLDDVDSFLVAVDLVGQEWSYLG 342
Query: 255 GY----------------EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVF 298
+ TI + + ++GS GND +I ++ G+D
Sbjct: 343 DLWVYDATKIVQNGRELDTNDNTIETGSGDDVLLGSRGNDTLIACCGDDTLNAGWGDDKA 402
Query: 299 DGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQ 358
G G D + + D +
Sbjct: 403 FGGDGNDVINLEKGND----FAEAGLGDDVVNGGEGDDVI-----------------YGD 441
Query: 359 RSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
++ + L G D E G D+ F + + +
Sbjct: 442 TNVNNSLGGDDKLRGGAGNDELHGNDGNDELNGGSGDDVLFGDQGNDNISGGEGDDWAAG 501
Query: 419 RGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE 477
+ G E D L + ++ L + G D +
Sbjct: 502 GVGEDKLRGGAGNDELHGNDGEDYLSGGSGNDTLAGGNGVDKIVGGNGSDEIEGGAGND 560
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/239 (15%), Positives = 70/239 (29%), Gaps = 22/239 (9%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLL------DLTLIGGVKNYIDLNTESWSSIGGYEK 258
+ + TI G++ + D +G NYID T ++I
Sbjct: 7 TVGNGNNRINAGDGANTIATGAGNNFIIGGIGADTITVGNGNNYIDSGTFGANTITAGFG 66
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
N I ++++ G++++ N GNDV G DT A + +
Sbjct: 67 NNFIITGNAVDTITAMGGDNIINAGDGVNTVTTGVGNDVIAVGVGADTVTSGAGDDIASV 126
Query: 319 YRFENAII--------VYDANEHKQDFLSD------VERLRFADQCIDSVNVKQRSIL-- 362
+ + V D ++ + +S F D + V+
Sbjct: 127 VGGADTVTTGAGYDRLVIDYSDFSTNMVSSPVTGAVSYIGNFGDGAANIVSFTAVEEFHI 186
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ +I G D+ +S G D + Y + + A
Sbjct: 187 TTGGGNDTIITGAGADILDSGAGSDTLDGGAGIDTILAGFGSDLIYGRIGDSIDGGEDA 245
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/246 (11%), Positives = 53/246 (21%), Gaps = 1/246 (0%)
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIY 319
TI + G + + + NN G D +G +
Sbjct: 4 DTITVGNGNNRINAGDGANTIATGAGNNFIIGGIGADTITVGNGNNYIDSGTFGANTITA 63
Query: 320 RFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
F N I+ + + D ++ + + G D+
Sbjct: 64 GFGNNFIITGNAVDTITAMGGDNIINAGDGVNTVTTGVGNDVIAVGVGADTVTSGAGDDI 123
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ G D Y + V G+ + +
Sbjct: 124 ASVVGGADTVTTGAGYDRLVIDYSDFSTNMVSSPVTGAVSYIGNFGDGAANIVSFTAVEE 183
Query: 440 FKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVF 499
F ++ +I G D + F S L G D +
Sbjct: 184 FHITTG-GGNDTIITGAGADILDSGAGSDTLDGGAGIDTILAGFGSDLIYGRIGDSIDGG 242
Query: 500 GSDRGA 505
+
Sbjct: 243 EDADNS 248
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIA 263
NN + + + ++ + G+D L+ GG + + + +I G E + A
Sbjct: 445 NNSLGGDDKLRGGAGNDELHGNDGNDELN----GGSGDDVLFGDQGNDNISGGEGDDWAA 500
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + G +GND + GN + SGND G +G+D + +I
Sbjct: 501 GGVGEDKLRGGAGNDELHGNDGEDYLSGGSGNDTLAGGNGVDKIV--GGNGSDEIEGGAG 558
Query: 324 AIIVYDA 330
++
Sbjct: 559 NDNLWGG 565
Score = 40.5 bits (93), Expect = 0.82, Method: Composition-based stats.
Identities = 75/493 (15%), Positives = 131/493 (26%), Gaps = 34/493 (6%)
Query: 88 YVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
T + D A+ G G I+ I G + S G
Sbjct: 2 AADTITVGNGNNRINAGDGANTIATGAGNNFIIGGIGADTITVGNGNNYIDSGTFGANTI 61
Query: 148 ---GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
+N + + ++ + T + +D++AV G+
Sbjct: 62 TAGFGNNFIITGNAVDTITAMGGDNIINAGDGVNTVTTGVGNDVIAVGVGADTVTSGAGD 121
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDL--LDLTLIGGV--KNYIDLNTESWSSIGGYEKNM 260
+I T+ G D +D + + + + G N+
Sbjct: 122 DI------ASVVGGADTVTTGAGYDRLVIDYSDFSTNMVSSPVTGAVSYIGNFGDGAANI 175
Query: 261 TIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
+ GND +I + ++ +G+D DG +G+DT S L
Sbjct: 176 VSFTAVEEFHITTGGGNDTIITGAGADILDSGAGSDTLDGGAGIDTILAGFGSDLIYGRI 235
Query: 321 FENAIIVYDANEHKQDFLS----DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIG 376
++ DA+ D L+ + + D +V S + I+ I
Sbjct: 236 GDSIDGGEDADNSDVDVLNLNYIGLHEIVLDDHENGTVYALDASGSRIGSFSFTNIESIV 295
Query: 377 QDVFESMKHFYEFGLSEGRDIT---FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
D + D D DL S G + T V+
Sbjct: 296 GDNLVFATPEVLSTEVDAIDPEPVCLDDVDSFLVAVDLVGQEWSYLGDLWVYDATKIVQN 355
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLY--LGS 491
GR D S +D++ L+ D N G + + D L
Sbjct: 356 GRELDTNDNTIETGSGDDVLLGSRGNDTLIACCGDDTLNAGWGDDKAFGGDGNDVINLEK 415
Query: 492 YDDLRNVFGSDR------------GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 539
+D D G + G + R L +++L
Sbjct: 416 GNDFAEAGLGDDVVNGGEGDDVIYGDTNVNNSLGGDDKLRGGAGNDELHGNDGNDELNGG 475
Query: 540 FADAPDLVQAGKD 552
D G D
Sbjct: 476 SGDDVLFGDQGND 488
>gi|33324363|gb|AAQ07962.1| matrix metalloproteinase 13 [Danio rerio]
Length = 475
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 56/202 (27%), Gaps = 50/202 (24%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSD 78
D W + + Y+ T ++ + AL W+ V L F S +D
Sbjct: 109 DYKWKKHQLTYRIGNYTPDMSVAEVD-------DSISKALKVWADVTPLRFTRIYSGTAD 161
Query: 79 IKFISSNN---------------GYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHN 123
I + + P + +FD + + Y + L
Sbjct: 162 IMISFATGDHRDGYPFDGPNGFLAHAFPPFEG--IGGDAHFDDDETFSYRSPQYYNLFLV 219
Query: 124 ALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATP 183
A HE GH+LGL H V D + F
Sbjct: 220 AAHEFGHSLGLEHSQDPGALMYPTYVYRDVDR---------------------FVLPR-- 256
Query: 184 MVSDIVAVQKIYGAPKGSLGNN 205
D+ +Q +YG ++
Sbjct: 257 --DDVNGIQSLYGPNTDVNTDD 276
>gi|302878657|ref|YP_003847221.1| Hemolysin-type calcium-binding region [Gallionella
capsiferriformans ES-2]
gi|302581446|gb|ADL55457.1| Hemolysin-type calcium-binding region [Gallionella
capsiferriformans ES-2]
Length = 1351
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/397 (11%), Positives = 101/397 (25%), Gaps = 41/397 (10%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ + Q+ ++ G +L + G +N + + ++ + TI T
Sbjct: 592 LNDSYSNVVVTQSGVNTAGTTQTELII-GTAQNDVLSSGGGNDTLFAGGGDDTINAGTGN 650
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGND--------VFDGSSGLDTFFYY--------AP 312
+++ G GND + NV SG+D G G D
Sbjct: 651 DTINGGDGNDTITDTGGTNVIDAGSGDDVVTASGNNTIYGGDGNDAVTVNYVGANRLEGG 710
Query: 313 SYLYKIYRFENAIIVYDANEHKQDF---------------LSDVERLRFADQCIDSVNVK 357
+ + N YDA + + +D D +++
Sbjct: 711 AGDDLLKVTHNGANGYDAGYYGESTTFVGGVGNDRLEGSSGADTYVFNRGDGSDTILDIG 770
Query: 358 QRSILEYTASYEDLIQVIG---QDVFESMKHFYEFGL------SEGRDITFDSYLYLGSY 408
+ Y + + G D+ S G D +
Sbjct: 771 TNAYWSYLVKADTVQFGAGISASDISASRSGNNLLIKINDPLNPAGGDQITVENWWSSDA 830
Query: 409 DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
+ SD + ++ I + + + + + G +
Sbjct: 831 YRIETFTFSDGTSLSKAQIHTMAQTLNGTSGADVIAGWDENNIINAGSGNDTISDTGGTN 890
Query: 469 HFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
++ + ++ +Y G +D V +K N
Sbjct: 891 VIDAGSGDDVVTASGNNTIYGGDGNDAVTVNYVGANRLEGGAGDDLLKVTHNGANGYDAG 950
Query: 529 YIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSI 565
Y + + +G D + + +I
Sbjct: 951 YYGESTTFVGGVGNDRLEGSSGADTYVFNRGDGSDTI 987
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/327 (15%), Positives = 89/327 (27%), Gaps = 65/327 (19%)
Query: 198 PKGSLGNNIYKIEVQQ--KDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
S + I + TI D+GG +++D G + + + + + GG
Sbjct: 857 NGTSGADVIAGWDENNIINAGSGNDTISDTGGTNVID----AGSGDDVVTASGNNTIYGG 912
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVV-IGNSANN-----------VFFESSGNDVFDGSSG 303
+ + + G +G+D++ + ++ N F GND +GSSG
Sbjct: 913 DGNDAVTVNYVGANRLEGGAGDDLLKVTHNGANGYDAGYYGESTTFVGGVGNDRLEGSSG 972
Query: 304 LDTFFYYAPSYLYKI-------------------YRFENAIIVYDANEHKQDFLS----- 339
DT+ + I + + A+ + L
Sbjct: 973 ADTYVFNRGDGSDTILDIGTNAYWSYLVKADTVQFGAGISASDISASRSGNNLLIKINDP 1032
Query: 340 --------------------DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
+E F+D S + TA ++L+ + D
Sbjct: 1033 LNPAGGDQITVENWWSSDAYRIETFTFSDGTGLSKAQI--HTMVGTAGDDNLVGTVYSDT 1090
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ + G DI + D D GA A E
Sbjct: 1091 LAGLDGNDVLNGNLGNDILQGGAG-NDTLTDTAGANLLDGGAGADTLTGSTGNELFAGGV 1149
Query: 440 FKALEYIASHEDLINAFADAPDLVQVG 466
S D+I V G
Sbjct: 1150 GNDTITTGSGADIIAFNRGDGMDVVNG 1176
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/293 (13%), Positives = 84/293 (28%), Gaps = 24/293 (8%)
Query: 85 NNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGY 144
N Y + D G T + + L + Y
Sbjct: 942 NGANGYDAGYYGESTTFVGGVGNDRLEGSSGADTYVFNRGDGSDTI---LDIGTNAYWSY 998
Query: 145 PVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGN 204
V + + + + + ++ + P D + V+ + + +
Sbjct: 999 LVKADTVQFGAGISASDISASRSGNNLLIKIND--PLNPAGGDQITVENWWSSDAYRIET 1056
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQ 264
+ + I T+ + GDD L T+ ++ G + N +
Sbjct: 1057 FTFS-DGTGLSKAQIHTMVGTAGDDNLVGTVYS-------------DTLAGLDGNDVLNG 1102
Query: 265 HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENA 324
+ + + G +GND + + N+ +G D GS+G + + I A
Sbjct: 1103 NLGNDILQGGAGNDTLTDTAGANLLDGGAGADTLTGSTGNE--LFAGGVGNDTITTGSGA 1160
Query: 325 IIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQ 377
I+ D ++ D + + L + +LI +G
Sbjct: 1161 DIIAFNRGDGMDVVNGG---VGTDNVVSLGCGINYADLALSKVSNNLILEVGN 1210
Score = 54.8 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/409 (10%), Positives = 93/409 (22%), Gaps = 81/409 (19%)
Query: 138 GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
+ + ++V+ ++ +D+++ G
Sbjct: 575 FEGAVTSVAMTPELLAVLNDSYSNVVVTQSGVNTAGTTQTELIIGTAQNDVLS---SGGG 631
Query: 198 PKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGG----VKNYIDLNTESWSSI 253
+ TI G+D + T + ++I
Sbjct: 632 NDTLFAG---GGDDTINAGTGNDTINGGDGNDTITDTGGTNVIDAGSGDDVVTASGNNTI 688
Query: 254 GGYEKNMTIAQH-TVIESVVGSSGNDVV-IGNSANN-----------VFFESSGNDVFDG 300
G + N + + + G +G+D++ + ++ N F GND +G
Sbjct: 689 YGGDGNDAVTVNYVGANRLEGGAGDDLLKVTHNGANGYDAGYYGESTTFVGGVGNDRLEG 748
Query: 301 SSGLDTFFYYAPSYLYKI-------------------YRFENAIIVYDANEHKQDFLS-- 339
SSG DT+ + I + + A+ + L
Sbjct: 749 SSGADTYVFNRGDGSDTILDIGTNAYWSYLVKADTVQFGAGISASDISASRSGNNLLIKI 808
Query: 340 -----------------------DVERLRFADQCI-----------DSVNVKQRSILEYT 365
+E F+D ++
Sbjct: 809 NDPLNPAGGDQITVENWWSSDAYRIETFTFSDGTSLSKAQIHTMAQTLNGTSGADVIAGW 868
Query: 366 ASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF---DSYLYLGSYDDLRNVFGSDRGAA 422
+ G D G D+ ++ +Y G +D V
Sbjct: 869 DENNIINAGSGNDTISDTGGTNVIDAGSGDDVVTASGNNTIYGGDGNDAVTVNYVGANRL 928
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+K N Y + + G D +
Sbjct: 929 EGGAGDDLLKVTHNGANGYDAGYYGESTTFVGGVGNDRLEGSSGADTYV 977
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 66/537 (12%), Positives = 116/537 (21%), Gaps = 72/537 (13%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
T+ + + I D G G TI + I
Sbjct: 606 VNTAGTTQTELIIGT-AQNDVLSSGGGNDTLFAGGGDDTINAGTGNDTINGGDGNDTITD 664
Query: 131 ALGLMH--PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
G GS + G + Y D ++Y A
Sbjct: 665 TGGTNVIDAGSGDDVVTASGNNTIYGGDGNDAVTVNYVGANRLEGGAGDDLLKVTHNGAN 724
Query: 189 VAVQKIYGAPKGSLGN------------NIYKIEVQQKDSPF--------------IQTI 222
YG +G + Y T+
Sbjct: 725 GYDAGYYGESTTFVGGVGNDRLEGSSGADTYVFNRGDGSDTILDIGTNAYWSYLVKADTV 784
Query: 223 YDSGGDDLLDLTLIGGVKNYID-----LNTES---------WSSIGGYEKNMTIAQHTVI 268
G D++ N + LN WSS + T + T +
Sbjct: 785 QFGAGISASDISASRSGNNLLIKINDPLNPAGGDQITVENWWSSDAYRIETFTFSDGTSL 844
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS------YLYKIYRFE 322
+ + G S +V N++ + SG DT + +
Sbjct: 845 SKAQIHTMAQTLNGTSGADVIAGWDENNIINAGSGNDTISDTGGTNVIDAGSGDDVVTAS 904
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSV------NVKQRSILEYTASYEDLIQVIG 376
+Y + + ++ V R D + Y S + +G
Sbjct: 905 GNNTIYGGDGNDAVTVNYVGANRLEGGAGDDLLKVTHNGANGYDAGYYGES-TTFVGGVG 963
Query: 377 QDVFESMKHFYEFGLSEGRDITFDSYLYLGSY-DDLRNVFGSDRGAAARHYITHGVKEGR 435
D E + + G + +Y L GA + G
Sbjct: 964 NDRLEGSSGADTYVFNRGDGSDTILDIGTNAYWSYLVKADTVQFGAGISASDISASRSGN 1023
Query: 436 NPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDL 495
N + D I + F +G ++ +
Sbjct: 1024 NLLIKINDPLNPAGGDQITV----ENWWSSDAYRIETFTFSDGTGLSKAQIHTMVGTAGD 1079
Query: 496 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
N+ G+ D L ++ L + AG +
Sbjct: 1080 DNLVGTVYSDTLA-----------GLDGNDVLNGNLGNDILQGGAGNDTLTDTAGAN 1125
Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 52/367 (14%), Positives = 97/367 (26%), Gaps = 25/367 (6%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
T S + +D+ ++ G G TI + I GS + G
Sbjct: 853 AQTLNGTSGADVIAGWDENNIINAGSGNDTISDTGGTNVI-------DAGSGDDVVTASG 905
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ Y D ++Y A D++ V GA G Y
Sbjct: 906 NNTIYGGDGNDAVTVNYVGANRLEGGAGD---------DLLKVTH-NGANGYDAG--YYG 953
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ S G D G +D+ T ++ S +
Sbjct: 954 ESTTFVGGVGNDRLEGSSGADTYVFNRGDGSDTILDIGTNAYWSYLVKADTVQFGAGISA 1013
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+ S + ++ + + + D + ++ + I
Sbjct: 1014 SDISASRSGNNLLIKINDPLNPAGGDQITVENWWSSDAYRIETFTFSDGTGLSKAQIHTM 1073
Query: 329 DANEHKQDFLSDV--ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHF 386
+ + V + L D IL+ A + L G ++ +
Sbjct: 1074 VGTAGDDNLVGTVYSDTLAGLDGNDVLNGNLGNDILQGGAGNDTLTDTAGANLLDGGAGA 1133
Query: 387 YEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYI 446
S G ++ + D + G+D A R V G D +L
Sbjct: 1134 DTLTGSTGNEL----FAGGVGNDTITTGSGADIIAFNRGDGMDVVNGGVGTDNVVSLGCG 1189
Query: 447 ASHEDLI 453
++ DL
Sbjct: 1190 INYADLA 1196
>gi|291571947|dbj|BAI94219.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 922
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 43/155 (27%), Gaps = 4/155 (2%)
Query: 227 GDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSAN 286
G D D + I + S + + N T+ ++++G G+D + G N
Sbjct: 402 GTDGDDTLFGTNNNDSILGLGGNDSLVSTGKGNDTLLGGLGNDTLIGGLGDDFLSGGPGN 461
Query: 287 NVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRF 346
+ +GN+ G G DT + + S L
Sbjct: 462 DSLVAGAGNNRLFGDGGNDTLV-GNSLGENTLRGGAGNDSIVGYQNDLVLGDSGNNVLIA 520
Query: 347 ADQCIDSVNVKQRSILE---YTASYEDLIQVIGQD 378
+ L Y+ + G D
Sbjct: 521 RSSNVTLEGGSGNDTLSISAYSFTGNVFRGGDGDD 555
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 83/278 (29%), Gaps = 25/278 (8%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHE---IGHA 131
S + Y T + ++ + G+ + + + I +
Sbjct: 528 EGGSGNDTLSISAYSFTGNVFRGGDGDDSYMIRYGGMGRLQAGSRIEDSGGQDTLTIVNN 587
Query: 132 LGLMHPGSYNGGYPVYGVDNDYEND-------------SFLTSVMSYFMPQDSMMDASFG 178
L P N + GV D S ++ + A G
Sbjct: 588 LSPGTPIDLNLDGFLSGVVGVARQDQNLLVDLNQDGEFSPEDDLVVVDFFNAAGTGAGTG 647
Query: 179 YCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG-GDDLLDLTLIG 237
+ T V+D+ Q I P + + + +G G+D L +G
Sbjct: 648 FIET--VNDLRGQQIINQVPVLGSDTVTDGSDSIIIGTDDNDRLVGTGKGNDTL----LG 701
Query: 238 GVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV 297
G+ N + + + G N + ++++G +G D++IG N+ GND
Sbjct: 702 GLGNDTLIVRRGNNFLDGGPGNDRLVGGVGHDTLIGGAGRDILIGGKGNDFLDGGPGNDR 761
Query: 298 FDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQ 335
+G G DT + A + +
Sbjct: 762 LNGGPGNDTL--NGGPGRDILTGGPGADVFVFGFGESR 797
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/355 (10%), Positives = 82/355 (23%), Gaps = 18/355 (5%)
Query: 203 GNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTI 262
+ + + T++ + +D I + + + N T+
Sbjct: 112 SDTVTDGPNIITGTDGDDTLFGTNNNDS------------ILGLGGNDRLVSTGKGNDTL 159
Query: 263 AQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
+++VG G+D + G N+ +GN+ G G DT +
Sbjct: 160 LGGLGNDTLVGGLGDDFLRGGPGNDSLVAGAGNNRLFGDGGNDTLV-GNSLGENTLRGGA 218
Query: 323 NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILE----YTASYEDLIQVIGQD 378
+ S L + L Y + L +
Sbjct: 219 GNDSIVGYQNDLVLGDSGNNVLIAGSSNVTLEGGSGNDTLRISSQYRFTGNVLRGGDADN 278
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPD 438
+ FY S D L + + + + ++
Sbjct: 279 TYIIPLAFYGQAGSRIEDSGGQDTLTIVNNLSPGTSIDLNLDGFLPGVVGVARQDQNLLV 338
Query: 439 AFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ +DL+ G G+ + +
Sbjct: 339 DLSRDGEFSPEDDLVVVDFFNAAGTGAGTGFIETVNDLRGQQIINQVPVLGSDTVTDGPN 398
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKAL-EYIASHEDLINAFADAPDLVQAGKD 552
+ + T+ +L ++ L+ + + G D
Sbjct: 399 IITGTDGDDTLFGTNNNDSILGLGGNDSLVSTGKGNDTLLGGLGNDTLIGGLGDD 453
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 59/417 (14%), Positives = 108/417 (25%), Gaps = 31/417 (7%)
Query: 194 IYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTE 248
++G + + T+ G+D L D L GG N +
Sbjct: 409 LFGTNNNDSILGLGGNDSLVSTGKGNDTLLGGLGNDTLIGGLGDDFLSGGPGNDSLVAGA 468
Query: 249 SWSSIGGYEKNMTIAQHTVIES-VVGSSGNDVV--------IGNSANNVFFESSGNDVFD 299
+ + G N T+ +++ E+ + G +GND + +G+S NNV S N +
Sbjct: 469 GNNRLFGDGGNDTLVGNSLGENTLRGGAGNDSIVGYQNDLVLGDSGNNVLIARSSNVTLE 528
Query: 300 GSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
G SG DT A S+ ++R + Y L A I+ +
Sbjct: 529 GGSGNDTLSISAYSFTGNVFRGGDGDDSYMIRYGGMGRLQ-------AGSRIEDSGGQDT 581
Query: 360 SILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDR 419
+ S I + + + D+ D + + F +
Sbjct: 582 LTIVNNLSPGTPIDLNLDGFLSGVVGVARQDQNLLVDLNQDGEFSPEDDLVVVDFFNAAG 641
Query: 420 GAAARHYITHGVKE------GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
A +I + P S +I + + +
Sbjct: 642 TGAGTGFIETVNDLRGQQIINQVPVLGSDTVTDGSDSIIIGTDDNDRLVGTGKGNDTLLG 701
Query: 474 GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASH 533
G + +L + G G L+ +
Sbjct: 702 GLGNDTLIVRRGNNFLDGGPGNDRLVGGVGHDTL--IGGAGRDILIGGKGNDFLDGGPGN 759
Query: 534 EDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSAA 590
+ L + G+D G F + D F
Sbjct: 760 DRLNGGPGNDTLNGGPGRD--ILTGGPGADVFVFGFGESRVAAPDRITDFEIGTDKI 814
Score = 48.2 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 53/348 (15%), Positives = 92/348 (26%), Gaps = 49/348 (14%)
Query: 94 YDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI----------GHALGLMHPGSYNGG 143
I D G G ++++ + + G++LG G
Sbjct: 439 GGLGNDTLIGGLGDDFLSGGPGNDSLVAGAGNNRLFGDGGNDTLVGNSLGENTLRGGAGN 498
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ G ND +V+ ++ S + G G
Sbjct: 499 DSIVGYQNDLVLGDSGNNVLIARSSNVTLEGGSGNDTLSISAYSFTGNVFRGG-----DG 553
Query: 204 NNIYKIEVQQKDSPFIQT-IYDSGGDDLLDLTLIGGVKNYIDLNTESW-SSIGGYEKNM- 260
++ Y I + I DSGG D L + IDLN + + S + G +
Sbjct: 554 DDSYMIRYGGMGRLQAGSRIEDSGGQDTLTIVNNLSPGTPIDLNLDGFLSGVVGVARQDQ 613
Query: 261 ----------------------------TIAQHTVIESVVGSSGNDVV--IGNSANNVFF 290
T A IE+V G ++ + ++
Sbjct: 614 NLLVDLNQDGEFSPEDDLVVVDFFNAAGTGAGTGFIETVNDLRGQQIINQVPVLGSDTVT 673
Query: 291 ESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQC 350
+ S + + G+ D + N ++ + D +RL
Sbjct: 674 DGS-DSIIIGTDDNDRLVGTGKGNDTLLGGLGNDTLIVRRGNNFLDGGPGNDRLVGGVGH 732
Query: 351 IDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ R IL + L G D GRDI
Sbjct: 733 DTLIGGAGRDILIGGKGNDFLDGGPGNDRLNGGPGNDTLNGGPGRDIL 780
Score = 45.2 bits (105), Expect = 0.035, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 70/289 (24%), Gaps = 9/289 (3%)
Query: 222 IYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGN--DV 279
I DSGG D L + IDLN + + + G Q+ +++ + D
Sbjct: 16 IEDSGGQDTLTIENRWSPGTSIDLNLDGF--LSGVVGVARQDQNLLVDLSRDGEFSPEDD 73
Query: 280 VIGNSANNVFFESSGNDVFDG---SSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQD 336
++ N +G + G + N I D ++
Sbjct: 74 LVVVDFFNAAGTGAGTGFIETVNDLRGQQIINQVPVLGSDTVTDGPNIITGTDGDDTLFG 133
Query: 337 FLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRD 396
++ L K L + L+ +G D G +
Sbjct: 134 TNNNDSILGLGGNDRLVSTGKGNDTLLGGLGNDTLVGGLGDDFLRGGPGNDSLVAGAGNN 193
Query: 397 ITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAF 456
F + GA + + L +S+ L
Sbjct: 194 RLFGDGGNDTLVGNSLGENTLRGGAGNDSIVGYQNDLVLGDSGNNVLIAGSSNVTLEGGS 253
Query: 457 ADAPDLVQVG--KDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDR 503
+ + G + Y + + + G D
Sbjct: 254 GNDTLRISSQYRFTGNVLRGGDADNTYIIPLAFYGQAGSRIEDSGGQDT 302
>gi|229520644|ref|ZP_04410068.1| hypothetical protein VIF_001170 [Vibrio cholerae TM 11079-80]
gi|229342468|gb|EEO07462.1| hypothetical protein VIF_001170 [Vibrio cholerae TM 11079-80]
Length = 1495
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 33/95 (34%)
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D L + I I G I + + + G GNDV+ G S ++
Sbjct: 1313 DSALKIAAFSNAYVDIAHGGGGKDRIYGQGGVDLIFGGSGNDHLYGGDGNDVLRGGSGDD 1372
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE 322
SGND+ G G D + L+K +
Sbjct: 1373 YLDGGSGNDILIGGLGDDILTGGSGEDLFKWVDGD 1407
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 32/100 (32%), Gaps = 5/100 (5%)
Query: 247 TESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDT 306
G I ++ + G SGND + G N+V SG+D DG SG D
Sbjct: 1323 NAYVDIAHGGGGKDRIYGQGGVDLIFGGSGNDHLYGGDGNDVLRGGSGDDYLDGGSGNDI 1382
Query: 307 FFYYAPSYLYKIYRFENAII---VYDANEHKQDFLSDVER 343
+ + V + D ++D
Sbjct: 1383 LI--GGLGDDILTGGSGEDLFKWVDGDLDGSTDRITDFHL 1420
Score = 47.5 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 37/231 (16%), Positives = 63/231 (27%), Gaps = 32/231 (13%)
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDV---------FDG----SSGLD 305
+ + ++V G+D++ + E ++ D SG D
Sbjct: 1246 GLVVDVGAGGDNVYLGKGDDIIFLG---DSHVEGLDDNTQAVQKEQAALDAWKQFGSGKD 1302
Query: 306 TFFYYAPSYLYK---IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
+ + P+ I F NA + +D R+ L
Sbjct: 1303 SDWLQDPNNEDSALKIAAFSNAYVDIAHGGGGKD------RIYGQGGVDLIFGGSGNDHL 1356
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ L G D + G DI GS +DL D +
Sbjct: 1357 YGGDGNDVLRGGSGDDYLDGGSGNDILIGGLGDDILTG-----GSGEDLFKWVDGDLDGS 1411
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ E D + + E + A D+ G DH S+F
Sbjct: 1412 TDRITDFHLSEKDKIDLSDLFDNPSEQE--VTALLDSIKSTVQGDDHSSSF 1460
>gi|45384534|ref|NP_990331.1| matrix metalloproteinase-27 [Gallus gallus]
gi|3511149|gb|AAC33733.1| matrix metalloproteinase [Gallus gallus]
Length = 472
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 64/197 (32%), Gaps = 50/197 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ T L+ + + A S V L F +DI
Sbjct: 112 WKKNNLTYRIVNYTPD--------LSKEVVDKAIQKAFKARSTVTPLIFARIQEGIADIM 163
Query: 81 FISSNNGYVCTPRY--------------DSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ PRY S + +++FD+ + W G G L A H
Sbjct: 164 VAFGTKAHGHCPRYFDGPLGVLAHAFPPGSGFGGDVHFDEDEDWTMG-SDGFNLFLVAAH 222
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GHALGL HP ND +Y S + +P
Sbjct: 223 EVGHALGLSHP-----------------NDQRAFMFPNYAYISPSE------FPLSP--D 257
Query: 187 DIVAVQKIYGAPKGSLG 203
DI +Q IYG+ + G
Sbjct: 258 DISGIQSIYGSATKTPG 274
>gi|130486970|ref|NP_001076262.1| matrix metalloproteinase-14 precursor [Oryctolagus cuniculus]
gi|3041677|sp|Q95220|MMP14_RABIT RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
Full=Membrane-type matrix metalloproteinase 1;
Short=MT-MMP 1; Short=MTMMP1; AltName:
Full=Membrane-type-1 matrix metalloproteinase;
Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
gi|1805295|gb|AAB41500.1| membrane type 1 metalloproteinase [Oryctolagus cuniculus]
Length = 582
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 41/159 (25%), Gaps = 31/159 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVHYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 167 IRDGREKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
G + A+HE+GHALGL H + + D
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMD 265
>gi|67923150|ref|ZP_00516639.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
gi|67854992|gb|EAM50262.1| Hemolysin-type calcium-binding region [Crocosphaera watsonii WH
8501]
Length = 309
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 68/215 (31%), Gaps = 15/215 (6%)
Query: 208 KIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWS---------SIGGYEK 258
+Y GG+D L + I T+++ + G E
Sbjct: 90 GGADTIYGGEARDALYGRGGNDTLYGGGGNDDRQDITAGTQAFGPNFFNTTLGGLYGGEG 149
Query: 259 NMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
+ + + + G G+D++ G +++ + + GND G +G DT + +
Sbjct: 150 DDLLDGGAGNDEIAGGLGDDILRGGDGDDLMYGNFGNDRVFGDAGNDTMYSRLVDAVTMF 209
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
+ II + + + + D + L A + + G D
Sbjct: 210 GGLGDDIIGTGNADDLITGNAGNDIISAGDGVDIVMGDIGNDTLAGGAGNDGFLGGAGND 269
Query: 379 VFE------SMKHFYEFGLSEGRDITFDSYLYLGS 407
VF + + GRDI Y GS
Sbjct: 270 VFNLTTEVIAGESDGISDWENGRDILLLPSAYSGS 304
Score = 53.3 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 58/208 (27%), Gaps = 4/208 (1%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+ ++ S + + GND+ + G DT + + + N+
Sbjct: 62 GNDWMTLVNTSPGSSLYGEDGNDIIEAGGGADTIYGGEARDALYGRGGNDTLYGGGGNDD 121
Query: 334 KQDFLSDVERL---RFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+QD + + F + +L+ A +++ +G D+
Sbjct: 122 RQDITAGTQAFGPNFFNTTLGGLYGGEGDDLLDGGAGNDEIAGGLGDDILRGGDGDDLMY 181
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
+ G D F Y L + G T + +A +
Sbjct: 182 GNFGNDRVFGDAGNDTMYSRLVDAVTMFGGLGDDIIGTGNADDLITGNAGNDIISAGDGV 241
Query: 451 D-LINAFADAPDLVQVGKDHFSNFGCEE 477
D ++ + G D F +
Sbjct: 242 DIVMGDIGNDTLAGGAGNDGFLGGAGND 269
>gi|291301772|ref|YP_003513050.1| hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
gi|290570992|gb|ADD43957.1| Hemolysin-type calcium-binding region [Stackebrandtia nassauensis
DSM 44728]
Length = 620
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 7/122 (5%)
Query: 186 SDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+D++ V K LG + + + TI G D + G N
Sbjct: 255 NDVITVDKNTKVNLTLLGGD---GNDRVHSAGGADTIVSGHGKD----DVYAGEGNDYVS 307
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G + N I T +++ G G+D + G + + GND DG +G D
Sbjct: 308 SGSGIDYVDGQDGNDDIGGGTGNDTLYGLGGDDYINGGEDADYLEGAKGNDTIDGGTGPD 367
Query: 306 TF 307
Sbjct: 368 II 369
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 59/248 (23%), Gaps = 33/248 (13%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQT--------IYDSGGDDLLDLTLI 236
+ D AV V+ + + +QT + G+D++ +
Sbjct: 204 MVDGKAVVNTGSGNDKVNVTTDKDGNVKVEVNGVVQTFPPGTPVVVRGGEGNDVITVDKN 263
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
V + L + + TI + V GND V S + GND
Sbjct: 264 TKVNLTL-LGGDGNDRVHSAGGADTIVSGHGKDDVYAGEGNDYVSSGSGIDYVDGQDGND 322
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNV 356
G +G DT + Y Y D +
Sbjct: 323 DIGGGTGNDTLYGLGGDD----YINGGEDADYLEGAKGNDT------IDGGTGPDIISGG 372
Query: 357 KQRSILEYTAS--------------YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
K L + + G+D + + + +G
Sbjct: 373 KGDDTLRGGGTGTDYDGYDPSKPERGDVFYGGEGKDDVTAGSGKSDAYIQDGDSTHNVDK 432
Query: 403 LYLGSYDD 410
D
Sbjct: 433 TVTVEISD 440
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 51/210 (24%), Gaps = 30/210 (14%)
Query: 173 MDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLD 232
+D + T + D G + + + G D +D
Sbjct: 260 VDKNTKVNLTLLGGDGNDRVHSAGGADTIVSG---HGKDDVYAGEGNDYVSSGSGIDYVD 316
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
G N ++ G + I + + G+ GND + G + ++
Sbjct: 317 ----GQDGNDDIGGGTGNDTLYGLGGDDYINGGEDADYLEGAKGNDTIDGGTGPDIISGG 372
Query: 293 SGNDVF-----------------------DGSSGLDTFFYYAPSYLYKIYRFENAIIVYD 329
G+D G G D + I ++ V
Sbjct: 373 KGDDTLRGGGTGTDYDGYDPSKPERGDVFYGGEGKDDVTAGSGKSDAYIQDGDSTHNVDK 432
Query: 330 ANEHKQDFLSDVERLRFADQCIDSVNVKQR 359
+ + +D+ + +
Sbjct: 433 TVTVEISDAGGFIKFEGSDEFKERMQADLD 462
Score = 38.2 bits (87), Expect = 4.4, Method: Composition-based stats.
Identities = 23/185 (12%), Positives = 33/185 (17%), Gaps = 19/185 (10%)
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN-------AIIVYDANEHKQDFLSDVERLR 345
G V + SG D V D ++
Sbjct: 206 DGKAVVNTGSGNDKVNVTTDKDGNVKVEVNGVVQTFPPGTPVVVRGGEGNDVIT------ 259
Query: 346 FADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYL 405
N K L + + G D S + EG D
Sbjct: 260 ------VDKNTKVNLTLLGGDGNDRVHSAGGADTIVSGHGKDDVYAGEGNDYVSSGSGID 313
Query: 406 GSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQV 465
N Y G + LE ++ +
Sbjct: 314 YVDGQDGNDDIGGGTGNDTLYGLGGDDYINGGEDADYLEGAKGNDTIDGGTGPDIISGGK 373
Query: 466 GKDHF 470
G D
Sbjct: 374 GDDTL 378
>gi|326914436|ref|XP_003203531.1| PREDICTED: 72 kDa type IV collagenase-like [Meleagris gallopavo]
Length = 267
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 60/197 (30%), Gaps = 51/197 (25%)
Query: 22 YWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETS-IHSDIK 80
W+ ++ YK T + + R AL WS V L F+ + H+DI
Sbjct: 106 RWNKKYLTYKIVNYTPDLPREYVN-------DAIRRALMVWSDVTPLRFKRVTQGHADIV 158
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ P + +FD + W +G L A
Sbjct: 159 IKFARRAHGDGYPFDGRSGTLAHAFQP--GEGLGGDAHFDDDERWSK-YNQGVNLFLVAA 215
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GH+LGL H + + + SY P+ T
Sbjct: 216 HEFGHSLGLAHSN---------------VRGALMYPLYSYVNPET----------FTLPQ 250
Query: 186 SDIVAVQKIYGAPKGSL 202
D +QK+YG +
Sbjct: 251 DDRRGIQKLYGRKSANS 267
>gi|294789785|ref|ZP_06755015.1| rhizobiocin/RTX toxin [Simonsiella muelleri ATCC 29453]
gi|294482291|gb|EFG29988.1| rhizobiocin/RTX toxin [Simonsiella muelleri ATCC 29453]
Length = 603
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ + G + + + ++++G +GND + G N++ +GND +G D
Sbjct: 450 GSGKTEILWGGKGDDVLDGFAGNDTLIGGAGNDWLRGGDGNDILIGGAGNDTLHSGAGAD 509
Query: 306 TFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
F I FE+ + + +E + + E
Sbjct: 510 IFVLNQS-GADTIVAFESGVDKLNVSEFRGLLADNGENF 547
Score = 43.6 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 17/61 (27%)
Query: 343 RLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSY 402
+L+ + + K +L+ A + LI G D G D
Sbjct: 447 KLQGSGKTEILWGGKGDDVLDGFAGNDTLIGGAGNDWLRGGDGNDILIGGAGNDTLHSGA 506
Query: 403 L 403
Sbjct: 507 G 507
Score = 40.2 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 19/87 (21%), Gaps = 3/87 (3%)
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSD---VERLRFADQCIDSVNVKQRSILEYTASYED 370
++++ + D L E L L A +
Sbjct: 424 AQANWQEWKDSGSLMIQGTTVADKLQGSGKTEILWGGKGDDVLDGFAGNDTLIGGAGNDW 483
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDI 397
L G D+ G DI
Sbjct: 484 LRGGDGNDILIGGAGNDTLHSGAGADI 510
>gi|297268618|ref|XP_001112141.2| PREDICTED: olfactory receptor 51L1 [Macaca mulatta]
Length = 504
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 59/189 (31%), Gaps = 51/189 (26%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SIHSDIKF 81
W+ Y + Y+ + ++ A+ WS V L F++ + +DIK
Sbjct: 29 WNKYTLTYRIINYPHDMKPSTV-------KDSIYNAVSIWSNVTPLIFQQVQNEDADIKI 81
Query: 82 IS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
G+ P S ++FDK + W G L A H
Sbjct: 82 SFWQWAHEDGWPFDGPGGILGHAFLPN--SGNPGVVHFDKNEHWSTS-NTGYNLFLVATH 138
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
EIGH+LGL H G+ S + Y P
Sbjct: 139 EIGHSLGLQHSGN---------------QSSIMYPTYWYHDPGT----------FQLSAD 173
Query: 187 DIVAVQKIY 195
DI +Q +Y
Sbjct: 174 DIQRIQHLY 182
>gi|124024601|ref|YP_001018908.1| hypothetical protein P9303_29131 [Prochlorococcus marinus str. MIT
9303]
gi|123964887|gb|ABM79643.1| Hypothetical protein P9303_29131 [Prochlorococcus marinus str. MIT
9303]
Length = 934
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/379 (11%), Positives = 94/379 (24%), Gaps = 34/379 (8%)
Query: 202 LGNNIYKIE--VQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYI---DLNTESWSSIGGY 256
G+ IY I I+ GG D + + E I
Sbjct: 207 AGDYIYGFGGRDTLSGGSGIDYIFGGGGADAIYGQTSTNTNDRSTNYLFGGEGNDYISSG 266
Query: 257 EKNMTIAQ-----------HTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+KN + + + + G +G+D++ G N+ G+D DG G D
Sbjct: 267 KKNDVLRGDGNQQGQEVPSNAGKDELYGGNGHDLITGGDGNDFLHGGQGDDYLDGGQGAD 326
Query: 306 TFFYYA-----PSYLYKIYRFENAIIVYDANEH--KQDFLSDVERLRFADQCIDSVNV-K 357
F S ++ ++ ++ L + E + F++ +
Sbjct: 327 IIFAATTGGVKSSRTDHYFQHDSDSKIWSNAPVLQNSATLINGEVITFSNGVDVIYDFHH 386
Query: 358 QRSILEY-TASYEDLIQVIG-QDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
L S+ L + +F + S + ++
Sbjct: 387 SDDQLYLPNTSFNKLTAGDQLSGLTTGDNYFVQGTWSIDDWSNARTNFQANNFSGSFTTG 446
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF-- 473
S ++ + + + ++ D A + + + +
Sbjct: 447 ESTTWGNDEDFLVLYNNQADDFFSINNTNFLILDFDHTFANSSSSSEPEDMIADPNESLR 506
Query: 474 ------GCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 527
G L + F + ++ G + +
Sbjct: 507 ELPILIAGPAGNAGDNSVSFSLVENTTAVHTFTNATAGGTTYWSITGGDDSSLFSINETT 566
Query: 528 EYIASHEDLINAFADAPDL 546
+A + D
Sbjct: 567 GALAFNSAPSFENPTDNDN 585
>gi|119489374|ref|ZP_01622154.1| hypothetical protein L8106_02422 [Lyngbya sp. PCC 8106]
gi|119454647|gb|EAW35793.1| hypothetical protein L8106_02422 [Lyngbya sp. PCC 8106]
Length = 3375
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/213 (14%), Positives = 62/213 (29%), Gaps = 11/213 (5%)
Query: 168 PQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGG 227
+ S + D + + +I A N + + + + D+G
Sbjct: 3135 EGSEVGTISHTVNSDDSRYDSLDIDQI-SANISDNDNTGQQNNFSEAAVVSLSELDDTGV 3193
Query: 228 DDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN 287
D L G N E + I G ++ + + G G+D + G++ N+
Sbjct: 3194 GSDFDDILFGNQGNDRISGEEGFDLIYGQGDADALSGEVGDDVLFGGQGDDQIQGDAGND 3253
Query: 288 VFFESSGNDVFDGSSGLDTF-------FYYAPSYLYKIYRFENAIIVYDANEHKQDFLSD 340
+ + G+D G G D + + +
Sbjct: 3254 IIYGDRGSDRLWGGEGEDQLLGGFGNDRLIGGLGADTLTGDLGNDAFVIGFGTGGNTIET 3313
Query: 341 VERLR-FADQ--CIDSVNVKQRSILEYTASYED 370
+ + F D I+ V+ L T++
Sbjct: 3314 ADVIVDFTDTQDVIELVSPLTFEQLNITSNSNV 3346
>gi|87118818|ref|ZP_01074717.1| hypothetical protein MED121_17364 [Marinomonas sp. MED121]
gi|86166452|gb|EAQ67718.1| hypothetical protein MED121_17364 [Marinomonas sp. MED121]
Length = 1167
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/389 (14%), Positives = 111/389 (28%), Gaps = 34/389 (8%)
Query: 80 KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGS 139
+ G +++ N + D++ + + I G H
Sbjct: 773 DIDLISFGDGAVIDLENQSIYTGNSNDNDIYGSDSSDDWLFGGDGDDTIRGRQGDDHLVG 832
Query: 140 YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPK 199
G +YG ++ T Y M ++ D+ ++ +
Sbjct: 833 GKGDDYLYGRSVSNTENTG-TDTAYYAGSVAEFMMTNYVDSNGDTQDDMFIIEDL----- 886
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
+ Y D DL++ ++ D + I +
Sbjct: 887 ---ATSGYNEGQDILSQIEYAQFGDGVLIDLVNTNIVFDG----DGTKTTDDWIFDQDFG 939
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI- 318
+ I S + + + ++ G+D+ +G SG DT +Y A Y +
Sbjct: 940 IDIFSGES-----SSDNDSNIDAMAGDDHIVGGEGDDIIEGGSGADTAYYGASVAEYLVD 994
Query: 319 ------YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV-------NVKQRSILEYT 365
I + D L++VE L F D + + +
Sbjct: 995 YISDTDIETTVEDIGSTEIDDGTDTLTNVETLHFGDGVTIDIESVDIYTGTNSDETINGS 1054
Query: 366 ASYEDLI-QVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAAR 424
+ +D I G DV + M+ EG DI + D +
Sbjct: 1055 DATDDWIFGGDGDDVLKGMQGDDHLVGGEGDDIIYGRNFSNSGTDTDTAYYADVIDNYEI 1114
Query: 425 H-YITHGVKEGRNPDAFKALEYIASHEDL 452
+ + T G K + + + Y +++L
Sbjct: 1115 NVWETSGGKTSMSIEDVGSDGYDEGYDEL 1143
Score = 54.8 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 84/255 (32%), Gaps = 26/255 (10%)
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGV--KNYIDLNTESWSSIGGY 256
GN++Y + F G+D + +DLN E SS G
Sbjct: 505 ATFGGNDLYNHKDDDVGVYFN----GGEGNDTISFYEYEAEEEGVTVDLNDEVQSSFGDG 560
Query: 257 EKNMTIAQHTV---IESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ + +E+VVG+ +DV+ GN+ NN+ GN++ DG +G D Y
Sbjct: 561 GLDADESDDVTLISVENVVGTQYDDVITGNNENNLLMGLEGNNILDGDNGFDIARYSGSI 620
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-----------QCIDSVNVKQRSIL 362
+ Y I N V +++ + D LS++E L F D + +
Sbjct: 621 WDYTI--NTNMSSVVNSSANINDSLSNIEFLSFEDDDGLYFYSSETGELSIYASDNGDSI 678
Query: 363 EYTASYED----LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSD 418
+ T S D + G D + G D + +
Sbjct: 679 QGTPSGSDAVDWIFGGDGDDTLKGKDGDDHLTGGGGDDRLYGQSGSSSGSHTDTAYYLGS 738
Query: 419 RGAAARHYITHGVKE 433
YI+ E
Sbjct: 739 VAEYMIEYISSTKDE 753
Score = 44.8 bits (104), Expect = 0.046, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 48/154 (31%), Gaps = 3/154 (1%)
Query: 185 VSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID 244
+ D + + S + + D + Y+ D D + I
Sbjct: 82 MGDYSDIVYMNVDNSSSNLDT--NFWLGGGDDLLVSDFYNDNDSDTNDTVYGQEGNDEIY 139
Query: 245 LNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGL 304
L + G + + ++ + + G SG+D + G + + S ND +G G
Sbjct: 140 L-GNGNDNGSGGQGDDSLFGGDGSDDLYGGSGHDYLEGGNGTDYLSGGSDNDYLNGGDGA 198
Query: 305 DTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFL 338
D + + ++ + Y QD
Sbjct: 199 DILEGGGGDDVLTGGKINSSGVDYVTGGSGQDIF 232
Score = 40.5 bits (93), Expect = 0.89, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 7/141 (4%)
Query: 205 NIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYID---LNTESWSSIGGYEKNMT 261
+I + V S + GGDDLL + + E I N
Sbjct: 87 DIVYMNVDNSSSNLDTNFWLGGGDDLLVSDFYNDNDSDTNDTVYGQEGNDEIYLGNGNDN 146
Query: 262 IAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF 321
+ +S+ G G+D + G S ++ +G D G S D + +
Sbjct: 147 GSGGQGDDSLFGGDGSDDLYGGSGHDYLEGGNGTDYLSGGSDND--YLNGGDGADILEGG 204
Query: 322 ENAIIVYDA--NEHKQDFLSD 340
++ N D+++
Sbjct: 205 GGDDVLTGGKINSSGVDYVTG 225
Score = 40.2 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 45/309 (14%), Positives = 87/309 (28%), Gaps = 35/309 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHA--- 131
+++ + + +++ N D D T + +
Sbjct: 845 SNTENTGTDTAYYAGSVAEFMMTNYVDSNGDTQDDMFIIEDLATSGYNEGQDILSQIEYA 904
Query: 132 -LGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI-- 188
G V+ D D ++ + M D
Sbjct: 905 QFGDGVLIDLVNTNIVFDGDGTKTTDDWIFDQDFGIDIFSGESSSDNDSNIDAMAGDDHI 964
Query: 189 ------VAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDS-------GGDDLLDLTL 235
++ GA G ++ + V I+T + G D L
Sbjct: 965 VGGEGDDIIEGGSGADTAYYGASVAEYLVDYISDTDIETTVEDIGSTEIDDGTDTLTNVE 1024
Query: 236 IGGVKNYIDLNTESWSSIGGYEKNMTIAQ-HTVIESVVGSSGNDVVIGNSANNVFFESSG 294
+ + ++ ES G + TI + + G G+DV+ G ++ G
Sbjct: 1025 TLHFGDGVTIDIESVDIYTGTNSDETINGSDATDDWIFGGDGDDVLKGMQGDDHLVGGEG 1084
Query: 295 NDVFDG------SSGLDTFFYYAPSYLYKIYRFENA---------IIVYDANEHKQDFLS 339
+D+ G + DT +Y Y+I +E + + D + D L
Sbjct: 1085 DDIIYGRNFSNSGTDTDTAYYADVIDNYEINVWETSGGKTSMSIEDVGSDGYDEGYDELR 1144
Query: 340 DVERLRFAD 348
DVE + F
Sbjct: 1145 DVEYVSFNG 1153
>gi|317483712|ref|ZP_07942659.1| hemolysin-type calcium-binding protein [Bilophila wadsworthia 3_1_6]
gi|316925028|gb|EFV46167.1| hemolysin-type calcium-binding protein [Bilophila wadsworthia 3_1_6]
Length = 1111
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 43/110 (39%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L GG N + + G + + + + + G SGND++ G S ++
Sbjct: 909 DDWLFGGEGNDVLFGLGGNDHLYGGSGDDVLFGGSGNDHLYGGSGNDILFGGSGDDYLDG 968
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
G D+ G SG D Y + +L + +I + + D L +
Sbjct: 969 GEGRDILFGGSGNDIIKYDSTDFLVDGGDGIDFLITDNKDLTLDDLLRNT 1018
Score = 47.1 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 71/303 (23%), Gaps = 57/303 (18%)
Query: 201 SLGNNIYKIEVQQKDSPFIQTIYDSGGDDLL--DLTLIGGVKNYIDLNTE-----SWSSI 253
+ G I P TI+ + GDD++ D + L ++
Sbjct: 730 NAGELYDAIASSTVTKPVSDTIFANKGDDVVFGDTAQFSVDGATVSLAEYVKAQLGFNPS 789
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ I S + + N+ + GNDV G G D +
Sbjct: 790 TADVIDYVREHPEEIGSALVPNANE--GKPDMPDALIGGEGNDVMYGQGGNDLLIGDGSN 847
Query: 314 ---YLYKIYRFENAIIVYDANEHKQDFLS------------------------------- 339
++R + H S
Sbjct: 848 TSGADDTLHRLAQELGTLTGGSHGVTPASLSDAILNLGHDSAKLHELADWSEKHLENSSD 907
Query: 340 ---------DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFG 390
+ L +L + + L G D+
Sbjct: 908 GDDWLFGGEGNDVLFGLGGNDHLYGGSGDDVLFGGSGNDHLYGGSGNDILFGGSGDDYLD 967
Query: 391 LSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHE 450
EGRDI F GS +D+ +D I + + ++ L +
Sbjct: 968 GGEGRDILFG-----GSGNDIIKYDSTDFLVDGGDGIDFLITDNKDLTLDDLLRNTDPNN 1022
Query: 451 DLI 453
I
Sbjct: 1023 GPI 1025
>gi|54296668|ref|YP_123037.1| structural toxin protein RtxA [Legionella pneumophila str. Paris]
gi|53750453|emb|CAH11847.1| structural toxin protein RtxA [Legionella pneumophila str. Paris]
Length = 7679
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Query: 246 NTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLD 305
+ I G + + I + + SG+DV+ S ++V +GND G SG D
Sbjct: 6967 RSGGHDIISGGQGDDRIYGQEGNDVIDAGSGDDVIDAGSGDDVIVGGTGNDTLTGGSGAD 7026
Query: 306 TFFYYAPSYLYKIYRFENAIIVYD 329
F ++ I+ D
Sbjct: 7027 QFVFFRGHGSNN-AGTAPTDIITD 7049
Score = 49.0 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
+ G +GNDV+ G + N+ GND G G+DTFF+ + + D
Sbjct: 7530 LNGGNGNDVLHGTTGNDFIRGGQGNDTMTGGGGVDTFFWLSGDDD------GGVDTITDF 7583
Query: 331 NEHKQDFLSDVERLRFAD 348
+ D SD L +D
Sbjct: 7584 KANPVDQSSDASVLNLSD 7601
>gi|288962200|ref|YP_003452495.1| hypothetical protein AZL_d01250 [Azospirillum sp. B510]
gi|288914466|dbj|BAI75951.1| hypothetical protein AZL_d01250 [Azospirillum sp. B510]
Length = 858
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 50/382 (13%), Positives = 86/382 (22%), Gaps = 39/382 (10%)
Query: 89 VCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYG 148
S I + + G +I+ + LG G
Sbjct: 170 AYRGTATSGNDTLIGDNGGNTINGLAGNDSIVGGTGNDSLIGGLGDDTLVGGGNSGQSAG 229
Query: 149 VDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYK 208
+ + + F + + + GA
Sbjct: 230 DTLNGGLGADHYIGGNGFTIVTYENATTG-----------ITLDLTNGAN---------- 268
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ I G + D +L G G N T+
Sbjct: 269 -NTGEAAGDSFVDIQRWVGSEHAD-SLTAGDTAVWFWGHGGDDVEHGGAGNDTLEAGDGN 326
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVY 328
+SV G GND++ G + N+ +GND G G D + + + V+
Sbjct: 327 DSVFGGGGNDLIYGRADNDQLHGQTGNDTVAGGGGADLIY--GDAGNDLLKGDWERDTVH 384
Query: 329 DANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYE----DLIQVIGQDVFESMK 384
+ V S Q ++ A + G F+
Sbjct: 385 GGDGDDTILAGIV--------TSGSYAQTQNDLVYGDAGNDRYIVVSQYDAGTVSFDGGT 436
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
L +++ Y Y D + G +
Sbjct: 437 GADTLELRSDDLTSYN--GYNLEYYTDVASPKIDISGMTLTSVETLALTGSRRHSVTMTA 494
Query: 445 YIASHEDLINAFADAPDLVQVG 466
A+ D I A VG
Sbjct: 495 AQANGFDSITGAATGDAFAIVG 516
Score = 41.3 bits (95), Expect = 0.58, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 34/109 (31%), Gaps = 4/109 (3%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRF---ENAIIV 327
+ G+ G D + G S N+ +GND G G D F + + F ++
Sbjct: 605 LTGTDGQDYLAGGSGNDTIISGAGNDYMTGGGGSDVFVFKPGDGWDYVGDFQAGNGGDVL 664
Query: 328 YDANEHKQDFLSDVERLRFADQCIDSVNV-KQRSILEYTASYEDLIQVI 375
A + V + D VN S + S L
Sbjct: 665 NVAGWSGLKDFASVMAVTVQDGANTVVNFDNGNSAILANTSRGSLTAAN 713
>gi|114571025|ref|YP_757705.1| glycosyl transferase family protein [Maricaulis maris MCS10]
gi|114341487|gb|ABI66767.1| glycosyl transferase, family 2 [Maricaulis maris MCS10]
Length = 882
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 73/213 (34%), Gaps = 26/213 (12%)
Query: 396 DITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINA 455
FD+ Y + + A H+ G ++G +P L+++ + L
Sbjct: 7 SPVFDAAHY----AKVVGIEFDSTINALAHFCAEGCRQGADPHPMVRLDWLLDQQVLDYR 62
Query: 456 FADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGV 515
+ +V D ++ FD YL D+ + H+ GV
Sbjct: 63 RQSVAQIFKVLVDRVEK---QQSTTPYFDPQYYLKMQPDVAQA-QMNPHW---HFWLSGV 115
Query: 516 KEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG---YEEGRSITFNPDLY 572
EGR P+ + L +I + F + Q F G + S F+ Y
Sbjct: 116 HEGRFPNPYLDLAHIDR---IFGPFGN----AQTALSWFVLNGDPSFVPS-SPEFDGVQY 167
Query: 573 LTSYDDLWNVFGSDRSAAAQHYITHGMKEGRAL 605
+ ++ D+ ++ H+++ G EGR
Sbjct: 168 MLNHADVRA----EKVPPLLHFLSSGRYEGREA 196
>gi|254422617|ref|ZP_05036335.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
gi|196190106|gb|EDX85070.1| FG-GAP repeat domain protein [Synechococcus sp. PCC 7335]
Length = 691
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 61/172 (35%), Gaps = 5/172 (2%)
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
G + I ++SS ++ + E+++G+ GN+V++G N++ +G
Sbjct: 472 NGDGFDDLIIGRPNTYSSGVSSGQSYVVFGAASSETLIGTDGNNVLVGGKGNDLLDGKAG 531
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD-QCIDS 353
NDV DG G D + + + + ++ + + + L
Sbjct: 532 NDVLDGDEGDDNLY--GGNDADILIGGDGNDSLFGEQGFDTLYGGNGDDLLLGGNGKDTL 589
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEF--GLSEGRDITFDSYL 403
+ LE + LI G D+ + F L EG D D
Sbjct: 590 IGGDGNDTLEGEIGKDTLIGGEGNDLLTGGQGRDTFVLVLGEGTDTITDFSG 641
Score = 54.0 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 49/170 (28%), Gaps = 6/170 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLI-----GGVKNYIDLNTESWSSIGGYEKNMTIA 263
+ GDD L GG N + + ++ G + +
Sbjct: 522 GNDLLDGKAGNDVLDGDEGDDNLYGGNDADILIGGDGNDSLFGEQGFDTLYGGNGDDLLL 581
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
++++G GND + G + GND+ G G DTF I F
Sbjct: 582 GGNGKDTLIGGDGNDTLEGEIGKDTLIGGEGNDLLTGGQGRDTFVLVLGEGTDTITDFSG 641
Query: 324 AIIVYDANEHKQDFLSDV-ERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
+ A LS V + F D + S LI
Sbjct: 642 QDRIGLAGGLGIGDLSFVGNDILFTDTNEVLATLSGIDTTSLNNSQFVLI 691
Score = 37.1 bits (84), Expect = 8.8, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 24/80 (30%), Gaps = 4/80 (5%)
Query: 342 ERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFD- 400
E L D V K +L+ A + L G D +G D F
Sbjct: 506 ETLIGTDGNNVLVGGKGNDLLDGKAGNDVLDGDEGDDNLYGGNDADILIGGDGNDSLFGE 565
Query: 401 ---SYLYLGSYDDLRNVFGS 417
LY G+ DDL
Sbjct: 566 QGFDTLYGGNGDDLLLGGNG 585
>gi|126327136|ref|XP_001366673.1| PREDICTED: similar to matrix metalloproteinase-27 [Monodelphis
domestica]
Length = 513
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 56/190 (29%), Gaps = 48/190 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIH-SDIKF 81
W + + Y+ T D+ +E + AL WSKV LTF S +DI
Sbjct: 106 WRKHSLTYRLLNYTPDMEKSDV-------EEAIQKALEVWSKVTPLTFTRISKGIADIMV 158
Query: 82 ISSNNGYVCTPRYDSR-------YFMEINFDKADVWRY---GIGKGTILSHNAL---HEI 128
+ PR F D K + + L HE
Sbjct: 159 AFRTRAHGKCPRQFDGPLGVLGHAFPPGWGIGGDTHFDEDENWTKDSSGFNLFLVAAHEF 218
Query: 129 GHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD 187
GH+LGL H +P Y + + + D
Sbjct: 219 GHSLGLSHSNDPSALMFPNYAFVDPSK--------------------------SPLSQDD 252
Query: 188 IVAVQKIYGA 197
I +Q IYG+
Sbjct: 253 IKGIQAIYGS 262
>gi|114640104|ref|XP_001153704.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
Length = 464
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 55/194 (28%), Gaps = 46/194 (23%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEE---------- 72
W + Y+ T AL W +V LTF
Sbjct: 108 WRKTHLTYRIVNHTPDLP-------RDAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMI 160
Query: 73 ---TSIHSDI-KFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEI 128
H D F + + +I+FD + W GT L A HE+
Sbjct: 161 SFAVKEHGDFYSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWTED-ASGTNLFLVAAHEL 219
Query: 129 GHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDI 188
GH+LGL H S T + Y + A F D+
Sbjct: 220 GHSLGLFH--------------------SANTEALMYPLYNSFTELAQFRLSQ----DDV 255
Query: 189 VAVQKIYGAPKGSL 202
+Q +YG P S
Sbjct: 256 NGIQSLYGPPPAST 269
>gi|301773290|ref|XP_002922070.1| PREDICTED: interstitial collagenase-like [Ailuropoda melanoleuca]
Length = 469
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 66/209 (31%), Gaps = 55/209 (26%)
Query: 10 TERIADHLLRDQY--WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVD 67
+A ++L D+ W + + Y+ + T D+ A WS V
Sbjct: 94 VPDVAQYVLTDRTPRWEHTHLTYRIENYTPDLPRADVDS-------AIEQAFRLWSNVSP 146
Query: 68 LTFEET-SIHSDIKFIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWR 111
LTF + +DI + + P +++FD+ W
Sbjct: 147 LTFTKIFEGQADIMISFVWGDHGDNSPFGGPANTLAHAFLP--GGGIGGDVHFDEEKRWT 204
Query: 112 YGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDS 171
L A HE+GH+LGL H + G ++ N+Y +
Sbjct: 205 SDFRNFN-LYCIAAHEVGHSLGLGH--DNDIGSLMFPSYNNYRD---------------- 245
Query: 172 MMDASFGYCATPMVSDIVAVQKIYGAPKG 200
DI A+Q +YG K
Sbjct: 246 ---------VLLSPRDISAIQALYGPSKN 265
>gi|163742303|ref|ZP_02149690.1| Hemolysin-type calcium-binding region, RTX [Phaeobacter
gallaeciensis 2.10]
gi|161384253|gb|EDQ08635.1| Hemolysin-type calcium-binding region, RTX [Phaeobacter
gallaeciensis 2.10]
Length = 307
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 38/117 (32%), Gaps = 4/117 (3%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVI 268
+ G D L G + + I G +
Sbjct: 144 GNDFLTGGLGADVLRGGSGADTL----HGNGGDDVLRGGVGRDVIFGGVGADLLGGGRGN 199
Query: 269 ESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAI 325
+ ++G SG+D + G + + + +GNDV G D F + + +I FE +
Sbjct: 200 DRLIGGSGSDTIRGGAGVDRLYGGTGNDVMTGGDEADIFVFNEGDHTDRITDFEVGV 256
Score = 44.8 bits (104), Expect = 0.044, Method: Composition-based stats.
Identities = 20/175 (11%), Positives = 39/175 (22%), Gaps = 37/175 (21%)
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
+ +T + + ++ +G D + + ++ +GND G G D
Sbjct: 106 GDDQITALLNDNVTAIRTYAGGDRISLGAGDDTVAAGAGNDFLTGGLGAD---------- 155
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVI 375
LR +L + + +
Sbjct: 156 ---------------------------VLRGGSGADTLHGNGGDDVLRGGVGRDVIFGGV 188
Query: 376 GQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
G D+ + G D Y N + A G
Sbjct: 189 GADLLGGGRGNDRLIGGSGSDTIRGGAGVDRLYGGTGNDVMTGGDEADIFVFNEG 243
Score = 37.1 bits (84), Expect = 9.0, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 31/130 (23%), Gaps = 1/130 (0%)
Query: 340 DVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITF 399
+V +R + A + L +G DV + G D+
Sbjct: 117 NVTAIRTYAGGDRISLGAGDDTVAAGAGNDFLTGGLGADVLRGGSGADTLHGNGGDDVLR 176
Query: 400 DSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADA 459
+ + R G R Y + D++ +A
Sbjct: 177 GGVGRDVIFGGVGADLLGGGRGNDRLIGGSGSDTIRGGAGVD-RLYGGTGNDVMTGGDEA 235
Query: 460 PDLVQVGKDH 469
V DH
Sbjct: 236 DIFVFNEGDH 245
>gi|159028656|emb|CAO88127.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 765
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 65/218 (29%), Gaps = 10/218 (4%)
Query: 139 SYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP 198
+ S + + + D + Q + A
Sbjct: 490 GFTASDVTLTKGVLSNFTSVNGDTYTATFTATDFQSPTGTVAVSNDYFDTLGNQGV--AN 547
Query: 199 KGSLGNNIYKIEVQQKDSPFIQTIYDSG--GDDLLDLTLIGGVKNYIDLNTESWSSIGGY 256
++ + ++ SG G D + + + ID +I G
Sbjct: 548 SANIAMTVGGGPDPNDGPSGGDSVIGSGTIGADSITGSTGDDDLSGID----GTDTINGG 603
Query: 257 EKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLY 316
+ N TI T + + G +GND +IG ++ + SGND +G +G DT
Sbjct: 604 DGNDTINGGTGADIIRGGTGNDNIIGLGGFDLIYGGSGNDTINGGNGNDTIV--GGFGND 661
Query: 317 KIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
+ + + +QD ++ D S
Sbjct: 662 SLIGGGGDTFQFLSIYDQQDVITGFNDTIVFDITGASA 699
Score = 44.8 bits (104), Expect = 0.045, Method: Composition-based stats.
Identities = 44/347 (12%), Positives = 82/347 (23%), Gaps = 14/347 (4%)
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G + V G S + F D++ A +DI
Sbjct: 388 DVTGFDDSDVNVSGGTLSDFTQVDGNSYTAIFTADDAVETTGSVSVAADSYTDIAGNNGG 447
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
G+ ++ + + +SP + + + G + + L S+
Sbjct: 448 AGSDTVTIDTLNPTVGITFDNSPLTGQNFSTTVTFQFSEAVSGFTASDVTLTKGVLSNFT 507
Query: 255 GYEKNMTIAQHTVIE--SVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ A T + S G+ ++ N +S N G D P
Sbjct: 508 SVNGDTYTATFTATDFQSPTGTVAVSNDYFDTLGNQGVANSANIAMTVGGGPDP--NDGP 565
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLI 372
S + D LS + D + + +
Sbjct: 566 SGGDSVIGSGTIGADSITGSTGDDDLSGI------DGTDTINGGDGNDTINGGTGADIIR 619
Query: 373 QVIGQDVFESMKHFYEFGLSEGRDITF----DSYLYLGSYDDLRNVFGSDRGAAARHYIT 428
G D + F G D + + G +D G D Y
Sbjct: 620 GGTGNDNIIGLGGFDLIYGGSGNDTINGGNGNDTIVGGFGNDSLIGGGGDTFQFLSIYDQ 679
Query: 429 HGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
V G N + ++ L + + +
Sbjct: 680 QDVITGFNDTIVFDITGASAFTALGSGALGTTTYTGAIDGGYLTYSG 726
>gi|1658112|gb|AAD13803.1| membane-type 1 metalloproteinase precursor [Oryctolagus cuniculus]
Length = 572
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVHYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + R
Sbjct: 167 IRDGREKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 268
>gi|328724695|ref|XP_003248224.1| PREDICTED: matrix metalloproteinase-16-like isoform 3
[Acyrthosiphon pisum]
Length = 583
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 72/243 (29%), Gaps = 47/243 (19%)
Query: 9 TTERIADHLLRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDL 68
T R + L+ W + YK + R A WS V L
Sbjct: 104 TDSRSRRYALQGSRWRVKDLTYKISKYPKLLGKSETDS-------EIRKAFDVWSDVTPL 156
Query: 69 TFEETSIHS---DIKFISSNNGYVCTPRYDSR---------YFMEINFDKADVWRYGIGK 116
TF +I+F +G Y + +FD ++ W G K
Sbjct: 157 TFTHKKSGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAFFPVYGGDAHFDDSEKWSIGSFK 216
Query: 117 GTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDAS 176
GT L A HE GH+LGL H + + Y + D
Sbjct: 217 GTNLFQVAAHEFGHSLGLSHSDVRSALMAPFYRG--------------YNPSFNLDSD-- 260
Query: 177 FGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI 236
D+ A+Q +YGA +N + + S T + G + D L
Sbjct: 261 ----------DVEAIQALYGASTSGESDND--DDSTSQGSGKKTTTQEPPGTEGSDAELC 308
Query: 237 GGV 239
Sbjct: 309 TDT 311
>gi|227821717|ref|YP_002825687.1| hypothetical protein NGR_c11490 [Sinorhizobium fredii NGR234]
gi|227340716|gb|ACP24934.1| hypothetical protein NGR_c11490 [Sinorhizobium fredii NGR234]
Length = 419
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/390 (11%), Positives = 100/390 (25%), Gaps = 22/390 (5%)
Query: 262 IAQHTVIESVVGS-SGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYR 320
I + +++ G ++ + G + N+ +G + G G DT + + Y
Sbjct: 26 IYGYGGNDTLTGGFQADNYIWGGTGNDTIDGGTGLNRLYGEDGDDTITAGWSNADSEAYG 85
Query: 321 FENAI-IVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDV 379
++ + D + V+ + + + + E Q D
Sbjct: 86 GAGNDKLIAGDSGVYLDGGTGVDVMDGGAGADIYIVDNAKDQIIEDWVPEYDNQANPTDT 145
Query: 380 FESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 439
+ + +E R F++ G ++ + + +
Sbjct: 146 VRTSASYVL--GAEARIELFETTKSSG-----TAGINLTGNNFSQTIKGNAGANTLDGKS 198
Query: 440 FKALEYIASHED-LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNV 498
+ D LI + + S ++LR
Sbjct: 199 GNDILVGGLGADKLIGGIGTDTANYEASVAGIVANLTSPSANTGEAAGDTFSSVENLRGS 258
Query: 499 FGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFG 558
D R Y L IA + + + AG D G
Sbjct: 259 RFDD-----RLYGDGANNTLMGGSGNDYLSSIAGQDVIKGESGNDKLNGGAGND--ILVG 311
Query: 559 YEEGRSITFNPDLYLTSYDDLWNVFGSDRSAAAQHYITHGMKEGRALGISGMQFKSVMNL 618
F L T+ D + + S + + + G+ +
Sbjct: 312 GSGNDVFVFTSALGSTNVDRITDFSVPYDSIHLDNAVFT-----KLTPTGGLAASAFAAN 366
Query: 619 SEKSRDKADLSLSFDHKKVDLYTDYFGDGN 648
+ + + ++ L+ D G G+
Sbjct: 367 ATGTATDKSDRIIYETDTGKLFYDADGSGS 396
Score = 49.8 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 76/275 (27%), Gaps = 42/275 (15%)
Query: 234 TLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANN------ 287
+ + GV N I + + GG++ + I T +++ G +G + + G ++
Sbjct: 17 SDVFGVTNKIYGYGGNDTLTGGFQADNYIWGGTGNDTIDGGTGLNRLYGEDGDDTITAGW 76
Query: 288 -----------------------VFFESSGNDVFDGSSGLDTFFYYAPSYLY-------K 317
+G DV DG +G D +
Sbjct: 77 SNADSEAYGGAGNDKLIAGDSGVYLDGGTGVDVMDGGAGADIYIVDNAKDQIIEDWVPEY 136
Query: 318 IYRFENAIIVYDANEHKQDFLSDVERLRFA----DQCIDSVNVKQRSILEYTASYEDLIQ 373
+ V + + + +E I+ ++ A L
Sbjct: 137 DNQANPTDTVRTSASYVLGAEARIELFETTKSSGTAGINLTGNNFSQTIKGNAGANTLDG 196
Query: 374 VIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 433
G D+ + G D G +L + + AA + + V+
Sbjct: 197 KSGNDILVGGLGADKLIGGIGTDTANYEASVAGIVANLTSPSANTGEAAGDTFSS--VEN 254
Query: 434 GRNPDAFKALEYIASHEDLINAFADAPDLVQVGKD 468
R L ++ L+ + G+D
Sbjct: 255 LRGSRFDDRLYGDGANNTLMGGSGNDYLSSIAGQD 289
Score = 45.5 bits (106), Expect = 0.025, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 37/90 (41%)
Query: 250 WSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFY 309
+ G N T+ + + + +G DV+ G S N+ +GND+ G SG D F +
Sbjct: 261 DDRLYGDGANNTLMGGSGNDYLSSIAGQDVIKGESGNDKLNGGAGNDILVGGSGNDVFVF 320
Query: 310 YAPSYLYKIYRFENAIIVYDANEHKQDFLS 339
+ + R + + YD+ +
Sbjct: 321 TSALGSTNVDRITDFSVPYDSIHLDNAVFT 350
>gi|254414009|ref|ZP_05027777.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
gi|196179145|gb|EDX74141.1| type I secretion target GGXGXDXXX repeat protein domain protein
[Microcoleus chthonoplastes PCC 7420]
Length = 682
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/245 (15%), Positives = 59/245 (24%), Gaps = 1/245 (0%)
Query: 233 LTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFES 292
+ + T + G N I +SV G+D+V G N+
Sbjct: 341 VAEPTNTQAPTPNPTPGDDVLVGTLGNDVIFAQAGDDSVFAIDGDDLVFGGDGNDDLTGG 400
Query: 293 SGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS-DVERLRFADQCI 351
GND DG G D F + F + L+
Sbjct: 401 IGNDFIDGGEGDDQLFGDLDINQDSDTGLPGNDFLNGGAGDDIIFGGFGDDILKGGSGID 460
Query: 352 DSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDL 411
+ IL ++L G D+F G D+ F D
Sbjct: 461 NLFGQDGNDILNGDNGNDNLNGGEGDDIFFGGNGNDRVFAGAGNDLLFGDGGNDRLNGDT 520
Query: 412 RNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFS 471
+ + G L A ++ L + +
Sbjct: 521 GDDIINGGRGDDLVIGNLGNDILNGDKGDDELVGNAGNDSLSGGDGNDRLVGSNPFTGVP 580
Query: 472 NFGCE 476
N G +
Sbjct: 581 NIGGD 585
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 56/229 (24%), Gaps = 1/229 (0%)
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
+ G N I +SV G+D+V G N+ GND DG G D F
Sbjct: 16 GDDVLVGTLGNDFIFAQAGDDSVFAIDGDDLVFGGDGNDDLTGGIGNDFIDGGEGDDQLF 75
Query: 309 YYAPSYLYKIYRFENAIIVYDANEHKQDFLS-DVERLRFADQCIDSVNVKQRSILEYTAS 367
+ F + L+ + IL
Sbjct: 76 GDLDINQDSDTGLPGNDFLNGGAGKDIIFGGFGDDILKGGSGIDNLFGQDGNDILNGDNG 135
Query: 368 YEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYI 427
++L G D+F G D+ F D + +
Sbjct: 136 NDNLNGGKGDDIFFGGNGNDRVFAGAGNDLLFGDGGNDRLNGDTGDDIINGGRGDDLVIG 195
Query: 428 THGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCE 476
G L A ++ L + L N G +
Sbjct: 196 NLGNDILNGDKGDDELVGNAGNDSLFGGDGNDRLLGSNPFTGVPNIGGD 244
Score = 55.6 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 61/452 (13%), Positives = 117/452 (25%), Gaps = 28/452 (6%)
Query: 105 DKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMS 164
D G + + ++ +G G D D DS +
Sbjct: 33 AGDDSVFAIDGDDLVFGGDGNDDLTGGIGNDF-IDGGEGDDQLFGDLDINQDSDTGLPGN 91
Query: 165 YFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYD 224
F+ + D FG ++ + ++G G+ N +
Sbjct: 92 DFLNGGAGKDIIFGGFGDDILKGGSGIDNLFG-QDGNDILNGDNGNDNLNGGKGDDIFFG 150
Query: 225 SGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNS 284
G+D + G N + + G + I + V+G+ GND++ G+
Sbjct: 151 GNGNDRV----FAGAGNDLLFGDGGNDRLNGDTGDDIINGGRGDDLVIGNLGNDILNGDK 206
Query: 285 ANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERL 344
++ ++GND G G D S + + A D
Sbjct: 207 GDDELVGNAGNDSLFGGDGNDRLL---GSNPFTGVPNIGGDLDTLAGGKGSDT------F 257
Query: 345 RFADQCIDSVNVKQRSILEYTASYE---DLIQVIGQDVFESMKHFYEFGLSEGRDITFDS 401
F + ++ DLI++ + +G + FD+
Sbjct: 258 VFGIGTDVFYTDDGNNDFALITDFDLTQDLIELPANLSGTFSLGATPADVPQGTALFFDN 317
Query: 402 YLYLG-SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
L + + T+ NP + D+I A A
Sbjct: 318 DLIGVIAGITPEQLSLDSDRFIFVAEPTNTQAPTPNPTPGDDVLVGTLGNDVIFAQAGDD 377
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
+ + D G ++ + +FG +
Sbjct: 378 SVFAIDGDDLVFGGDGNDDLTGGIGNDFIDGGEGDDQLFGD---------LDINQDSDTG 428
Query: 521 PDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
L A + + F D +G D
Sbjct: 429 LPGNDFLNGGAGDDIIFGGFGDDILKGGSGID 460
Score = 55.2 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/307 (15%), Positives = 88/307 (28%), Gaps = 15/307 (4%)
Query: 65 VVDLTFEETSIHSD--IKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSH 122
+ +T E+ S+ SD I N TP + + DV G ++ +
Sbjct: 323 IAGITPEQLSLDSDRFIFVAEPTNTQAPTPNPTPGDDVLVGTLGNDVIFAQAGDDSVFAI 382
Query: 123 NALHEIGHALGLMHP--------GSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMD 174
+ + G G D D DS + F+ + D
Sbjct: 383 DGDDLVFGGDGNDDLTGGIGNDFIDGGEGDDQLFGDLDINQDSDTGLPGNDFLNGGAGDD 442
Query: 175 ASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLT 234
FG ++ + ++G G+ N + G+D +
Sbjct: 443 IIFGGFGDDILKGGSGIDNLFG-QDGNDILNGDNGNDNLNGGEGDDIFFGGNGNDRV--- 498
Query: 235 LIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSG 294
G N + + G + I + V+G+ GND++ G+ ++ ++G
Sbjct: 499 -FAGAGNDLLFGDGGNDRLNGDTGDDIINGGRGDDLVIGNLGNDILNGDKGDDELVGNAG 557
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND G G D P + + F + D D
Sbjct: 558 NDSLSGGDGNDRLVGSNPFTGVPNIGGDLDTLTGGQGSDTFVFGIGTDVFYTDDGNNDFA 617
Query: 355 NVKQRSI 361
+ +
Sbjct: 618 LITDFDL 624
Score = 52.1 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 67/249 (26%), Gaps = 28/249 (11%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L+G + N S+ + + + + + G GND + G ++ F
Sbjct: 17 DDVLVGTLGNDFIFAQAGDDSVFAIDGDDLVFGGDGNDDLTGGIGNDFIDGGEGDDQLFG 76
Query: 292 S-----------SGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAIIVYDANEH 333
GND +G +G D F S + ++ + I+ N +
Sbjct: 77 DLDINQDSDTGLPGNDFLNGGAGKDIIFGGFGDDILKGGSGIDNLFGQDGNDILNGDNGN 136
Query: 334 KQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLS 392
+ + F +L + L G D+ + +
Sbjct: 137 DNLNGGKGDDIFFGGNGNDRVFAGAGNDLLFGDGGNDRLNGDTGDDIINGGRGDDLVIGN 196
Query: 393 EGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDL 452
G DI DD + + G + F + I D
Sbjct: 197 LGNDILNGDK-----GDDELVGNAGNDSL----FGGDGNDRLLGSNPFTGVPNIGGDLDT 247
Query: 453 INAFADAPD 461
+ +
Sbjct: 248 LAGGKGSDT 256
Score = 45.9 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 49/190 (25%), Gaps = 5/190 (2%)
Query: 282 GNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDV 341
++V + GND +G D+ F A ++ + + + +
Sbjct: 13 PTFGDDVLVGTLGNDFIFAQAGDDSVF--AIDGDDLVFGGDGNDDLTGGIGNDFIDGGEG 70
Query: 342 ERLRFADQCID---SVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDIT 398
+ F D I+ + L A + + G D+ + +G DI
Sbjct: 71 DDQLFGDLDINQDSDTGLPGNDFLNGGAGKDIIFGGFGDDILKGGSGIDNLFGQDGNDIL 130
Query: 399 FDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFAD 458
+ R + G L + + D
Sbjct: 131 NGDNGNDNLNGGKGDDIFFGGNGNDRVFAGAGNDLLFGDGGNDRLNGDTGDDIINGGRGD 190
Query: 459 APDLVQVGKD 468
+ +G D
Sbjct: 191 DLVIGNLGND 200
Score = 37.5 bits (85), Expect = 7.1, Method: Composition-based stats.
Identities = 53/489 (10%), Positives = 104/489 (21%), Gaps = 57/489 (11%)
Query: 75 IHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGL 134
+ D D+ G G ++ + + G
Sbjct: 149 FGGNGNDRVFAGAGNDLLFGDGGNDRLNGDTGDDIINGGRGDDLVIGNLGNDILNGDKGD 208
Query: 135 MHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKI 194
G ++G D + + D A T + V
Sbjct: 209 DELVGNAGNDSLFGGDGNDRLLGSNPFTGVPNIGGDLDTLAGGKGSDTFVFGIGTDVFYT 268
Query: 195 YGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIG 254
+ + + P + S G D+ + DL G
Sbjct: 269 DDGNNDFALITDFDLTQDLIELPANLSGTFSLGATPADVPQGTALFFDNDLIG---VIAG 325
Query: 255 GYEKNMTIAQHTVIESVV-GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
+ +++ I ++ ++V + GNDV +G D+ F A
Sbjct: 326 ITPEQLSLDSDRFIFVAEPTNTQAPTPNPTPGDDVLVGTLGNDVIFAQAGDDSVF--AID 383
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCID---SVNVKQRSILEYTASYED 370
++ + + + + + F D I+ + L A +
Sbjct: 384 GDDLVFGGDGNDDLTGGIGNDFIDGGEGDDQLFGDLDINQDSDTGLPGNDFLNGGAGDDI 443
Query: 371 LIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHG 430
+ G D+ + +G DI + R + G
Sbjct: 444 IFGGFGDDILKGGSGIDNLFGQDGNDILNGDNGNDNLNGGEGDDIFFGGNGNDRVFAGAG 503
Query: 431 VKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLG 490
DL+ L D N G + +
Sbjct: 504 N-------------------DLLFGDGGNDRLNGDTGDDIINGGRGDDLVIG-------- 536
Query: 491 SYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAG 550
G L A ++ L + +
Sbjct: 537 ---------------------NLGNDILNGDKGDDELVGNAGNDSLSGGDGNDRLVGSNP 575
Query: 551 KDHFSNFGY 559
N G
Sbjct: 576 FTGVPNIGG 584
>gi|170052992|ref|XP_001862472.1| matrix metalloproteinase [Culex quinquefasciatus]
gi|167873694|gb|EDS37077.1| matrix metalloproteinase [Culex quinquefasciatus]
Length = 483
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 50/229 (21%), Positives = 71/229 (31%), Gaps = 57/229 (24%)
Query: 21 QYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARW----ALGEWSKVVDLTFEETS-- 74
Q WS F+ YK T + Q V R+ A WS V +L F E +
Sbjct: 98 QKWSKNFLTYKIMNFPTGQP-----------QSVIRYLLDKAFSAWSNVTNLDFAEVTFV 146
Query: 75 IHSDIKFISSNN------------------GYVCTPRYDSRYFMEINFDKADVWRYGIGK 116
+DI+ + + P ++F+ + G
Sbjct: 147 DRADIEVVFGGQVHWSRGERCSFPMDTDVFAHAFYPEEG-----NVHFNTKYYFDGGESL 201
Query: 117 GTILSHNALHEIGHALGLMH-------PGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQ 169
G L A+HEIGH LGL H G D +N L V +
Sbjct: 202 GQFL-EVAMHEIGHVLGLDHSKSKASLMHLTEIGRFTEPQPIDVKNIQRLYGV----RGE 256
Query: 170 DSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQQKDSPF 218
S T M A+Q G G+ Y +V+ K +P
Sbjct: 257 SMRAAGSRLCSLTAM---DAAIQTSDGVIYVFAGD--YFYDVKNKFAPG 300
>gi|1705980|sp|P55032|MMP7_FELCA RecName: Full=Matrilysin; AltName: Full=Matrin; AltName:
Full=Matrix metalloproteinase-7; Short=MMP-7; AltName:
Full=Pump-1 protease; AltName: Full=Uterine
metalloproteinase; Flags: Precursor
gi|436482|gb|AAA18222.1| PUMP-1 [Felis catus]
Length = 262
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 55/193 (28%), Gaps = 50/193 (25%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET--------- 73
W + + Y+ T + L AL WSK + L+F
Sbjct: 99 WISKVVTYRIISYTRDLPRVTVDHL-------VAKALNMWSKEIPLSFRRVVLGIPDIVI 151
Query: 74 --SIHSDIKF-----ISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALH 126
+ + F + P + +FD+ + W G G G A H
Sbjct: 152 GFARGAHGDFYPFDGPGGTLAHAYEP--GPGLGGDAHFDEDERWADGRGLGINFLAVATH 209
Query: 127 EIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVS 186
E+GH+LGL H + D EN
Sbjct: 210 ELGHSLGLRHSSDPDSVMYPTYGARDSEN-------------------------FKLSPG 244
Query: 187 DIVAVQKIYGAPK 199
DI +Q++YG
Sbjct: 245 DIREIQELYGKRS 257
>gi|113478347|ref|YP_724408.1| multicopper oxidase, type 2 [Trichodesmium erythraeum IMS101]
gi|110169395|gb|ABG53935.1| multicopper oxidase, type 2 [Trichodesmium erythraeum IMS101]
Length = 1346
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/234 (14%), Positives = 65/234 (27%), Gaps = 35/234 (14%)
Query: 264 QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFEN 323
+ + E+ +G++GN+++ G++ + + G+D +G+ G D +
Sbjct: 1142 GNLLAENKIGTTGNNLINGDNNGDNIYGLEGDDTLNGNFGNDLLY--------------- 1186
Query: 324 AIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESM 383
++ L K L + L G D+
Sbjct: 1187 -------------GFRGIDSLNGGAGNDSFRGGKDEDTLRGGEGSDVLNGEEGNDILIGG 1233
Query: 384 KHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKAL 443
+ F D FD + N A + E K
Sbjct: 1234 EGSDIFVF--DTDEIFDPEILGIDSITDFNASKDLIELGAMSFTKFETTEDIQ----KNF 1287
Query: 444 EYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
++S+ D + Q G +++ G G + L DL
Sbjct: 1288 AVVSSNSDAATSEGLIVYSSQSGNLYYNTDGTAPGFGSG-GQFATLEGNSDLAA 1340
Score = 54.0 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 57/167 (34%), Gaps = 22/167 (13%)
Query: 223 YDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGND---- 278
+ G++L++ G E ++ G N + I+S+ G +GND
Sbjct: 1150 IGTTGNNLINGDNNGDN----IYGLEGDDTLNGNFGNDLLYGFRGIDSLNGGAGNDSFRG 1205
Query: 279 -----VVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS-------YLYKIYRFENAII 326
+ G ++V GND+ G G D F + + I F +
Sbjct: 1206 GKDEDTLRGGEGSDVLNGEEGNDILIGGEGSDIFVFDTDEIFDPEILGIDSITDFNASKD 1265
Query: 327 VYDANEHKQDFLSDVERLR--FADQCIDSVNVKQRSILEYTASYEDL 371
+ + E ++ FA +S ++ Y++ +L
Sbjct: 1266 LIELGAMSFTKFETTEDIQKNFAVVSSNSDAATSEGLIVYSSQSGNL 1312
Score = 40.5 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 47/179 (26%), Gaps = 11/179 (6%)
Query: 471 SNFGCEEGRFVTFDSYLYLGSYDD-LRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEY 529
G +Y DD L FG+D Y G+ +
Sbjct: 1151 GTTGNNLINGDNNGDNIYGLEGDDTLNGNFGNDLL-----YGFRGIDSLNGGAGNDSFRG 1205
Query: 530 IASHEDLINAFADAPDLVQAGKDHFSNFGYEEGRSITFNPDLYLTSYDDLWNVFGSDRSA 589
+ L + G D G E F+ D ++ +
Sbjct: 1206 GKDEDTLRGGEGSDVLNGEEGND--ILIGGEGSDIFVFDTDEIFD--PEILGIDSITDFN 1261
Query: 590 AAQHYITHGMKE-GRALGISGMQFKSVMNLSEKSRDKADLSLSFDHKKVDLYTDYFGDG 647
A++ I G + +Q + S ++ + + + +LY + G
Sbjct: 1262 ASKDLIELGAMSFTKFETTEDIQKNFAVVSSNSDAATSEGLIVYSSQSGNLYYNTDGTA 1320
>gi|297838805|ref|XP_002887284.1| hypothetical protein ARALYDRAFT_476141 [Arabidopsis lyrata subsp.
lyrata]
gi|297333125|gb|EFH63543.1| hypothetical protein ARALYDRAFT_476141 [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 56/220 (25%), Gaps = 54/220 (24%)
Query: 46 ELNPNAQEVARWALGEWSKVVDLTFE--ETSIHSDIKFISSNNGYVCTPRYDSRYFMEIN 103
L + V A G WS V L F ++ SDI + +D +
Sbjct: 180 PLTEEVKSVFSRAFGRWSDVTALNFTLSDSFSTSDITIGFYTGDHGDGEPFDGVLGTLAH 239
Query: 104 F----------DKADVWRYGIGKGTILSHN--------ALHEIGHALGLMHPGSYNGGYP 145
D + W + LS A+HEIGH LGL H
Sbjct: 240 AFSPPSGKFHLDADENWVVSGDLDSFLSVTAAVDLESVAVHEIGHLLGLGHS-------- 291
Query: 146 VYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNN 205
S S+M + D+ +Q +YGA
Sbjct: 292 -----------SVEESIMY-------PTITTGKRKVDLTNDDVEGIQYLYGANPN----- 328
Query: 206 IYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDL 245
+ D+GG + L
Sbjct: 329 ---FNGTTSPPSSTRHQRDTGGFSAAWRIDGSSRSTIVSL 365
>gi|4103982|gb|AAD01905.1| ApxIVA var3 [Actinobacillus pleuropneumoniae]
Length = 1522
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 44/332 (13%), Positives = 92/332 (27%), Gaps = 66/332 (19%)
Query: 271 VVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDA 330
V+GS ++ + G++ +++ GND GS G DT+ + IY + ++
Sbjct: 1088 VLGSQKDNNLSGSAGDDLLIGGEGNDTLKGSYGADTYIFSKGHGQDVIYEYSDSANSKKD 1147
Query: 331 NE--------------------------HKQDFLS----------DVERLRFADQCIDSV 354
+ H D ++ ++L FAD+ I
Sbjct: 1148 IDTLKFTDVNYAEVKFRRVDNDLMLFGYHDTDSVTVKSFYSHVDYQFDKLEFADRSITRD 1207
Query: 355 NVKQRSI-LEYTASYEDLI----------QVIGQDVFESMKHFYEFGLSEGRDITFDSYL 403
+ + + L T +D+ G D+ + S+G +
Sbjct: 1208 ELIKAGLHLYGTDGNDDIKDHADWDSIVEGGKGNDILRGGYGADTYIFSKGHG---QDIV 1264
Query: 404 YLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLV 463
Y + +D R +Y + + + D + +
Sbjct: 1265 YEDTNNDNRARDIDTLTFTDVNYAEVKFR------RVDNDLMLFGYHDTDSVTIKSFYNH 1318
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDA 523
+ +F R +T D +FG+D + +
Sbjct: 1319 VDYQCDKLDFAD---RSITRDEL-----GKQGMALFGTDGDDNINDWGRN--SVIDAGAG 1368
Query: 524 FKALEYIASHEDLINAFADAPDLVQAGKDHFS 555
+ + LI + G D +
Sbjct: 1369 NDTVNGGNGDDTLIGGKGNDILRGGYGADTYI 1400
Score = 59.0 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 10/96 (10%)
Query: 253 IGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAP 312
+ G + + I + +GND V G + ++ GND+ G G DT+ +
Sbjct: 1345 LFGTDGDDNINDWGRNSVIDAGAGNDTVNGGNGDDTLIGGKGNDILRGGYGADTYIFSKG 1404
Query: 313 SYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFAD 348
+Y N D++ L+F D
Sbjct: 1405 HGQDIVYEDTNNDN----------RARDIDTLKFTD 1430
Score = 45.2 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 45/382 (11%), Positives = 87/382 (22%), Gaps = 92/382 (24%)
Query: 71 EETSIHSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGH 130
+ + + + I + D + G T + GH
Sbjct: 1077 TDLKGDEKNNIVLGSQKDNNLSGSAGD-DLLIGGEGNDTLKGSYGADTYIFSK-----GH 1130
Query: 131 ALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFG----------YC 180
G Y+ + + + + + + +M + Y
Sbjct: 1131 --GQDVIYEYSDSANSKKDIDTLKFTDVNYAEVKFRRVDNDLMLFGYHDTDSVTVKSFYS 1188
Query: 181 ATPMVSD--------------IVAVQKIYGAPKGSLGNNIYKIEVQQKDSPFIQTIYDSG 226
D I A +YG + + + +
Sbjct: 1189 HVDYQFDKLEFADRSITRDELIKAGLHLYGTDGNDDIKDHADWDSIVEGGKGNDILRGGY 1248
Query: 227 GDDLLDLT-LIGGVKNYIDLNTE---------SWSSIGGYE------KNMTIAQHTVIES 270
G D + G Y D N + +++ + E N +
Sbjct: 1249 GADTYIFSKGHGQDIVYEDTNNDNRARDIDTLTFTDVNYAEVKFRRVDNDLMLFGYHDTD 1308
Query: 271 VVG---------------------------SSGNDVVIGNSANN---------VFFESSG 294
V + G ++ V +G
Sbjct: 1309 SVTIKSFYNHVDYQCDKLDFADRSITRDELGKQGMALFGTDGDDNINDWGRNSVIDAGAG 1368
Query: 295 NDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSV 354
ND +G +G DT + A + H QD + E ++ D
Sbjct: 1369 NDTVNGGNGDDTLI--GGKGNDILRGGYGADTYIFSKGHGQDIV--YEDTNNDNRARDID 1424
Query: 355 NVKQRSI----LEYTASYEDLI 372
+K I L ++ DLI
Sbjct: 1425 TLKFTDINLSELWFSRENNDLI 1446
>gi|49904709|gb|AAH76638.1| Matrix metallopeptidase 14 (membrane-inserted) [Mus musculus]
Length = 582
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 43/162 (26%), Gaps = 31/162 (19%)
Query: 18 LRDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEET---- 73
++ W + I + T + E R A W L F E
Sbjct: 114 IQGLKWQHNEITFCIQNYTPKVGEY-------ATFEAIRKAFRVWESATPLRFREVPYAY 166
Query: 74 -----------------SIHSDIKFISSNNGY---VCTPRYDSRYFMEINFDKADVWRYG 113
H D G+ P + + + +
Sbjct: 167 IREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSVEPWTVQNE 226
Query: 114 IGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYEN 155
G + A+HE+GHALGL H + + D EN
Sbjct: 227 DLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEN 268
>gi|325131962|gb|EGC54662.1| iron-regulated protein FrpC [Neisseria meningitidis M6190]
Length = 415
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/279 (13%), Positives = 77/279 (27%), Gaps = 37/279 (13%)
Query: 232 DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFE 291
D L G N + ++ G E N + + + + G GND + G N+
Sbjct: 15 DDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIG 74
Query: 292 SSGNDVFDGSSGLDTFFYYAPSYLYKIYRFE----------------------------- 322
+GND +GSSG DT+ + +Y ++
Sbjct: 75 GAGNDYLEGSSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHL 134
Query: 323 --------NAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQV 374
+ V ++ ++ + F + + V ++ + + T + L
Sbjct: 135 LIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAY 194
Query: 375 IGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
++G D+ Y N Y +G
Sbjct: 195 QSGSTLNGGLGDDYLYGADGDDLLNGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVL 254
Query: 435 RNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
+ L ++ LI + G D +
Sbjct: 255 NGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFG 293
Score = 60.2 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 76/253 (30%), Gaps = 11/253 (4%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
+ + T + +D + +G G G +N + G +
Sbjct: 56 GGEGNDHLNGEDGNDTLIGGAGNDYLEGSSGSDTYVFGKGFGQDTVYNYDYATGRKDIIR 115
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSD-----IVA 190
+ + ++ + D S Y + D VA
Sbjct: 116 FTDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVA 175
Query: 191 VQKIYGAPKGSLGNNIYKI--EVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTE 248
K + +Y +Y + GDDLL+ G N +
Sbjct: 176 TVKKLVQQSTDGSDRLYAYQSGSTLNGGLGDDYLYGADGDDLLN----GDAGNDSIYSGN 231
Query: 249 SWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF 308
++ G E N + + + + G GND + G N+ +GND +G SG DT+
Sbjct: 232 GNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYV 291
Query: 309 YYAPSYLYKIYRF 321
+ +Y +
Sbjct: 292 FGKGFGQDTVYNY 304
Score = 45.5 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 46/394 (11%), Positives = 100/394 (25%), Gaps = 58/394 (14%)
Query: 150 DNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAP----------- 198
+ D NDS + + + DA +GY +++ + G
Sbjct: 19 NGDAGNDSIYSGNGNDTLDGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGN 78
Query: 199 ---KGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+GS G++ Y Y +G D++ T + I
Sbjct: 79 DYLEGSSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRFTDGITADMLTFTREGNHLLIKA 138
Query: 256 YEKNMTIAQHTVIESVVGSS----------------------------GNDVVIGNSANN 287
+ + + + ++ + G+D + + +
Sbjct: 139 KDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKVLDVATVKKLVQQSTDGSDRLYAYQSGS 198
Query: 288 VFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFA 347
G+D G+ G D + IY + D + L
Sbjct: 199 TLNGGLGDDYLYGADGDD--LLNGDAGNDSIYSGNGNDTL--------DGGEGNDALYGY 248
Query: 348 DQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGS 407
+ + L + LI G D E + +G ++
Sbjct: 249 NGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYHVDK 308
Query: 408 YDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFK----ALEYIASHEDLINAFADAPDLV 463
D + G AA H+I G + + + + + D +
Sbjct: 309 NSDTMHFKG--FKAADVHFIRSGSDLVLSASEQDNVRISGFFYGENHRVDTFVFDDAAIS 366
Query: 464 QVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRN 497
+ N G + ++ + ++
Sbjct: 367 NPDFAKYINAGNNLVQSMSVFGSNTAATGGNVDA 400
>gi|296284681|ref|ZP_06862679.1| VCBS [Citromicrobium bathyomarinum JL354]
Length = 1045
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 56/220 (25%), Gaps = 8/220 (3%)
Query: 274 SSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEH 333
+G+ V G N+ GND+ DG G DT + Y I + + +
Sbjct: 537 GTGSMVFYGRGGNDTLTGGLGNDILDGGEGTDTAVFSGSRDAYAITQIADG-QFEVSGPD 595
Query: 334 KQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSE 393
D L+ +E L+FAD L Y D + +
Sbjct: 596 GTDTLTSIEHLQFADGTYVFGPTTGPVSLGYAGFGYAPEAGGWADNTTYPRGVADIDGDG 655
Query: 394 GRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHED-- 451
D+ L + + + A + G D + D
Sbjct: 656 RADLIGFGSAGLFAALSNGDGTFGETFLAYNGFGASDAAGGWANDNLYPRTIADVNGDGL 715
Query: 452 -----LINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSY 486
+A FG + F +
Sbjct: 716 QDLIGFGSAGVSIALGQAPASGQAVAFGPATLAYAGFGAS 755
>gi|255262380|ref|ZP_05341722.1| type I secretion target repeat protein [Thalassiobium sp. R2A62]
gi|255104715|gb|EET47389.1| type I secretion target repeat protein [Thalassiobium sp. R2A62]
Length = 730
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 65/236 (27%), Gaps = 7/236 (2%)
Query: 202 LGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLI--GGVKNYIDLNTESWSSIGGYEKN 259
G++I D + D GG L+++ Y + T +
Sbjct: 312 AGDDILTGNS--IDGVGNDSQADEGGSVLINVPGPVASIEITYANTGTGGQALWITDVAF 369
Query: 260 MTIA-QHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKI 318
I+ T +++ G+DV+ G ++ SG+D+ DG G DT + A S +
Sbjct: 370 DPISITETFDDNINTGIGDDVIYGELGDDDINAGSGDDIIDGGVGDDTIY--AGSDNDTV 427
Query: 319 YRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQD 378
++ + + + D E VI D
Sbjct: 428 TGGAGNDTIFGQGGDDIINGGEGDDTVTFSEGDDIEGGSGNDTFVLEDLGEPSNGVITID 487
Query: 379 VFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 434
+ L G F + DD F + E
Sbjct: 488 GGSGDEGLGGDTLQLGNLGVFTQDVIDSFVDDGTASFSGSVTLEDGTILNFSEIEN 543
Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats.
Identities = 62/483 (12%), Positives = 116/483 (24%), Gaps = 78/483 (16%)
Query: 141 NGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAV-QKIYGAPK 199
GY V D + ++ + + + S+ + T V+D G +
Sbjct: 2 AQGYLVTLGDTTLDAGDVISGALITYTTDFVIGSGSWTWSGTWTVNDTNYNNITDSGTYE 61
Query: 200 GSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKN 259
N+Y I F+ I + T+ +++ T S + Y +
Sbjct: 62 LGTDGNVYFIPTN----WFVDPITTASATTAPTYTIGDTPSPFVEGTTGSDTVDNSYTDS 117
Query: 260 MTIAQHTVIESVVGSSGNDVVIGNSA-NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYK- 317
+ + GND + N+ + S G+D SG DT + +
Sbjct: 118 DGDQVSVDHDFISTGDGNDTITSTGGGNDTAYGSIGSDTITTGSGDDTVYGDSNLGQVGS 177
Query: 318 ----IYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTASYEDL-- 371
+ A + +VE ++ N + +Y + +++
Sbjct: 178 VNMSWLAEGASGTDVTAGFTQDTGDINVEVTITDLGGLN--NASTNNSTQYGSQFDNFNP 235
Query: 372 -----IQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNV----FGSDRGAA 422
+ G E F D++ NV D+ +
Sbjct: 236 NSALQLGGNGSATSGVESGTAEV------KFDFSDSSGGLYEDEVANVQFRINDIDQSSW 289
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVT 482
NP +A + L D + S G +
Sbjct: 290 DDQVTVVAFDSAGNPVYLDFQ--LAGDDILTGNSIDGVGNDSQADEGGSVLINVPGPVAS 347
Query: 483 F---------------------------------------DSYLYLGSYDDLRNVFGSDR 503
D +Y DD N D
Sbjct: 348 IEITYANTGTGGQALWITDVAFDPISITETFDDNINTGIGDDVIYGELGDDDINAGSGDD 407
Query: 504 GAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQAGKDHFSNFGYEEGR 563
G + A ++ + D G D + + EG
Sbjct: 408 IID----GGVGDDTIYAGSDNDTVTGGAGNDTIFGQGGDDIINGGEGDDTVT---FSEGD 460
Query: 564 SIT 566
I
Sbjct: 461 DIE 463
>gi|170741198|ref|YP_001769853.1| hemolysin-type calcium-binding region [Methylobacterium sp. 4-46]
gi|168195472|gb|ACA17419.1| Hemolysin-type calcium-binding region [Methylobacterium sp. 4-46]
Length = 363
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 70/290 (24%), Gaps = 16/290 (5%)
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVV 272
+ + T+ + G D L G + + G + I + +
Sbjct: 15 SQGETPMATLNGTPGPDQLI----GTNAADVINGLAGNDVLLGALGDDQINGGAGFDRID 70
Query: 273 GSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFF-------YYAPSYLYKIYRFENAI 325
G GND + G + GNDV G G D Y +
Sbjct: 71 GQDGNDTLDGGDDPDYVAGGPGNDVIYGRGGSDQLIGEAGDDLIYGNEGDDYAAGNPGSD 130
Query: 326 IVYDANEHKQDFLSDVERLRFAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMK 384
++ + F D + I+ Y+ +G D +
Sbjct: 131 TLFGGAGNDFFVGEQGNDFVFGDEGDDFVSGGEDNDIVRGGIGYDYADGDLGDDTVYGDE 190
Query: 385 HFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 444
G D F G +D N D + G + D +
Sbjct: 191 GNDVVFGDAGNDRLFGDTGLGGGGNDTVNGGAGDDVV----FGETGDDQVFGGDGNDFIG 246
Query: 445 YIASHEDLINAFADAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDD 494
A ++ L + G D + + + D
Sbjct: 247 AGAGNDYLSGGAGTDSLYGEDGNDLLFGNAGNDELVGGAGADTFAFGRGD 296
Score = 59.8 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/258 (14%), Positives = 70/258 (27%), Gaps = 31/258 (12%)
Query: 209 IEVQQKDSPFIQTIYDSGGDDLLDL--------------TLIGGVKNYIDLNTESWSSIG 254
+ Q I G+D LD + G + + I
Sbjct: 56 GDDQINGGAGFDRIDGQDGNDTLDGGDDPDYVAGGPGNDVIYGRGGSDQLIGEAGDDLIY 115
Query: 255 GYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTF------- 307
G E + A + +++ G +GND +G N+ F G+D G D
Sbjct: 116 GNEGDDYAAGNPGSDTLFGGAGNDFFVGEQGNDFVFGDEGDDFVSGGEDNDIVRGGIGYD 175
Query: 308 FYYAPSYLYKIYRFENAIIVYDANEHKQ------DFLSDVERLRFADQCIDSVNVKQRSI 361
+ +Y E +V+ + + + +
Sbjct: 176 YADGDLGDDTVYGDEGNDVVFGDAGNDRLFGDTGLGGGGNDTVNGGAGDDVVFGETGDDQ 235
Query: 362 LEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGA 421
+ + + G D +G D+ F + D+L G+D A
Sbjct: 236 VFGGDGNDFIGAGAGNDYLSGGAGTDSLYGEDGNDLLFGNAG----NDELVGGAGADTFA 291
Query: 422 AARHYITHGVKEGRNPDA 439
R V++ +
Sbjct: 292 FGRGDGQDLVRDFVSGTD 309
Score = 57.1 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 81/291 (27%), Gaps = 14/291 (4%)
Query: 84 SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGG 143
+ D D G G I ++ +G G
Sbjct: 61 NGGAGFDRIDGQDGNDTLDGGDDPDYVAGGPGNDVIYGRGGSDQL---IGEAGDDLIYGN 117
Query: 144 YPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLG 203
+ +D+ + F + D FG VS + G
Sbjct: 118 EGDDYAAGNPGSDTLFGGAGNDFFVGEQGNDFVFGDEGDDFVSGGEDNDIVRGGIGYDYA 177
Query: 204 NNIYKIEVQQKDSPFIQTIYDSGGDDLL----------DLTLIGGVKNYIDLNTESWSSI 253
+ + ++ G+D L + T+ GG + + +
Sbjct: 178 DGDLG-DDTVYGDEGNDVVFGDAGNDRLFGDTGLGGGGNDTVNGGAGDDVVFGETGDDQV 236
Query: 254 GGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPS 313
G + N I + + G +G D + G N++ F ++GND G +G DTF +
Sbjct: 237 FGGDGNDFIGAGAGNDYLSGGAGTDSLYGEDGNDLLFGNAGNDELVGGAGADTFAFGRGD 296
Query: 314 YLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEY 364
+ F + V N + + V+ ++ +
Sbjct: 297 GQDLVRDFVSGTDVIAFNNNAFANFAAVQAASRQVGSDVLISYGDGDTITL 347
Score = 56.7 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 74/300 (24%), Gaps = 7/300 (2%)
Query: 226 GGDDLLDLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSA 285
GG L G T + G I + ++G+ G+D + G +
Sbjct: 6 GGCARLVKASQGETPMATLNGTPGPDQLIGTNAADVINGLAGNDVLLGALGDDQINGGAG 65
Query: 286 NNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLR 345
+ GND DG G D + IY + + + ++ +
Sbjct: 66 FDRIDGQDGNDTLDG--GDDPDYVAGGPGNDVIYGRGGSDQLIGEAGDDLIYGNEGDDYA 123
Query: 346 FAD-QCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI----TFD 400
+ + + G D + G D D
Sbjct: 124 AGNPGSDTLFGGAGNDFFVGEQGNDFVFGDEGDDFVSGGEDNDIVRGGIGYDYADGDLGD 183
Query: 401 SYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAP 460
+Y +D+ + + G + N A + + + +D +
Sbjct: 184 DTVYGDEGNDVVFGDAGNDRLFGDTGLGGGGNDTVNGGAGDDVVFGETGDDQVFGGDGND 243
Query: 461 DLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRN 520
+ + + + G D L + G G R+
Sbjct: 244 FIGAGAGNDYLSGGAGTDSLYGEDGNDLLFGNAGNDELVGGAGADTFAFGRGDGQDLVRD 303
>gi|220914827|ref|YP_002490135.1| Hemolysin-type calcium-binding region [Methylobacterium nodulans
ORS 2060]
gi|219952578|gb|ACL62968.1| Hemolysin-type calcium-binding region [Methylobacterium nodulans
ORS 2060]
Length = 341
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 63/259 (24%), Gaps = 3/259 (1%)
Query: 237 GGVKNYIDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGND 296
G + + G N I + + G GND++ G + GND
Sbjct: 15 GTNGPDLINGLAGDDILLGLAGNDEINGGPGFDRIDGQDGNDILDGGDDVDYIAGGLGND 74
Query: 297 VFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLS-DVERLRFADQCIDSVN 355
G G D + I+ E + + +
Sbjct: 75 TIYGRGGADQLI--GEAGDDLIFGNEGDDYAAGNPGNDILYGGDGNDFFVGEAGFDYVSG 132
Query: 356 VKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVF 415
++ + ++ G D+ E GRD+ + L +
Sbjct: 133 DNGNDFVKGGDDDDTVLGGTGDDLVEGDLGNDFLDGGAGRDVLYGDAGNDRILAGLDDDQ 192
Query: 416 GSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGC 475
+ G R D + A ++DL + + G D
Sbjct: 193 ALGGLGDDVLFGEFGNDFLRGEDGNDFIGAGAGNDDLSGGAGNDALYGEAGNDLLFGNAG 252
Query: 476 EEGRFVTFDSYLYLGSYDD 494
+ S + D
Sbjct: 253 NDELVGGTGSDTFGFGRGD 271
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 82/281 (29%), Gaps = 14/281 (4%)
Query: 92 PRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDN 151
+ D D G+G TI ++ G G G
Sbjct: 49 IDGQDGNDILDGGDDVDYIAGGLGNDTIYGRGGADQLIGEAGDDLIFGNEGDDYAAGNPG 108
Query: 152 DYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEV 211
+ + + G D V + G + ++
Sbjct: 109 NDILYGGDGNDFFVGEAGFDYVSGDNGNDFVKGGDDDDTV--LGGTGDDLVEGDL--GND 164
Query: 212 QQKDSPFIQTIYDSGGDDLL-----DLTLIGGVKNYIDLNTESWSSIGGYEKNMTIAQHT 266
+Y G+D + D +GG+ + + + G + N I
Sbjct: 165 FLDGGAGRDVLYGDAGNDRILAGLDDDQALGGLGDDVLFGEFGNDFLRGEDGNDFIGAGA 224
Query: 267 VIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAII 326
+ + G +GND + G + N++ F ++GND G +G DTF + I F
Sbjct: 225 GNDDLSGGAGNDALYGEAGNDLLFGNAGNDELVGGTGSDTFGFGRGDGQDLIRDF----- 279
Query: 327 VYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSILEYTAS 367
V E + FA + V +++ Y A
Sbjct: 280 VTGGPERDVIAFNGGVFTSFAAVQAATQQVGADAVISYGAG 320
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/278 (15%), Positives = 64/278 (23%), Gaps = 12/278 (4%)
Query: 243 IDLNTESWSSIGGYEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSS 302
I T + G I + ++G +GND + G + GND+ DG
Sbjct: 3 IINGTPGPDQLVGTNGPDLINGLAGDDILLGLAGNDEINGGPGFDRIDGQDGNDILDG-- 60
Query: 303 GLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSIL 362
G D + IY A + + + + IL
Sbjct: 61 GDDVDYIAGGLGNDTIYGRGGADQLIGEAGDD--------LIFGNEGDDYAAGNPGNDIL 112
Query: 363 EYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRNVFGSDRGAA 422
+ + G D + D DL N F
Sbjct: 113 YGGDGNDFFVGEAGFDYVSGDNGNDFVKGGDDDDTVLGGTGDDLVEGDLGNDFLDGGAGR 172
Query: 423 ARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNFGCEE--GRF 480
Y G + L F + + G D +
Sbjct: 173 DVLYGDAGNDRILAGLDDDQALGGLGDDVLFGEFGNDFLRGEDGNDFIGAGAGNDDLSGG 232
Query: 481 VTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEG 518
D+ D L G+D T G G
Sbjct: 233 AGNDALYGEAGNDLLFGNAGNDELVGGTGSDTFGFGRG 270
Score = 45.9 bits (107), Expect = 0.019, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 66/275 (24%), Gaps = 31/275 (11%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
++ G + ++G D+ +G +G D A + + D
Sbjct: 2 AIINGTPGPDQLVGTNGPDLINGLAGDDILLGLAGNDEI----NGGPGFDRIDGQDGNDI 57
Query: 338 LSDVERLRFADQCIDSVNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDI 397
L D + + LI G D+ + + G DI
Sbjct: 58 LDG------GDDVDYIAGGLGNDTIYGRGGADQLIGEAGDDLIFGNEGDDYAAGNPGNDI 111
Query: 398 TFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFA 457
+ N F +G + D + + +
Sbjct: 112 LYGGDG---------NDFFVGEAGFDYVSGDNGNDFVKGGDDDDTVLGGTGDDLVEGDLG 162
Query: 458 DAPDLVQVGKDHFSNFGCEEGRFVTFDSYLYLGSYDDLRNVFGSDRGAAARHYITHGVKE 517
+ G+D + D LG D + G
Sbjct: 163 NDFLDGGAGRDVLYGDAGNDRILAGLDDDQALGGLGDDVL------------FGEFGNDF 210
Query: 518 GRNPDAFKALEYIASHEDLINAFADAPDLVQAGKD 552
R D + A ++DL + +AG D
Sbjct: 211 LRGEDGNDFIGAGAGNDDLSGGAGNDALYGEAGND 245
>gi|126327144|ref|XP_001366886.1| PREDICTED: similar to Matrix metallopeptidase 13 (collagenase 3)
[Monodelphis domestica]
Length = 475
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 49/160 (30%), Gaps = 25/160 (15%)
Query: 19 RDQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEET-SIH 76
R W + + Y+ T + + R AL WS V L F +
Sbjct: 113 RTLKWPRFNLTYRILNYTPD--------MTQAEVDKAIRKALKVWSDVTPLNFTRLHNGT 164
Query: 77 SDIKFISS-----NNGYVCTPRY--------DSRYFMEINFDKADVWRYGIGKGTILSHN 123
+DI + P Y + +FD ++W KG L
Sbjct: 165 ADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDEIWT-NSAKGYNLFLV 223
Query: 124 ALHEIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSV 162
A HE GH+LGL H +P+Y V
Sbjct: 224 AAHEFGHSLGLDHSKDPGALMFPIYTYTGKSGFMLPDDDV 263
>gi|163748214|ref|ZP_02155513.1| hypothetical protein OIHEL45_19891 [Oceanibulbus indolifex HEL-45]
gi|161378513|gb|EDQ02983.1| hypothetical protein OIHEL45_19891 [Oceanibulbus indolifex HEL-45]
Length = 382
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 53/166 (31%), Gaps = 20/166 (12%)
Query: 20 DQYWSNYFIRYKPDVLTTHRLSFDITELNPNAQEVARWALGEWSKVVDLTFEETSIHSDI 79
+Q S + + +F NP Q + R A W V+++ F E + +
Sbjct: 14 EQGHSGGTVTWSF-ASPGAGSAFAGDISNPTYQALIRDAFQAWENVINIDFVEVADGAQS 72
Query: 80 KFISS-----------NNGYVCTPRYDSRYFM----EINFDKADVWRYG---IGKGTILS 121
+ S + EI FD A+ W G L
Sbjct: 73 DLRLGWDSIDGAYGVIGTAQSYLSKTSSTLYSVTEAEIRFDLAENWSTSKTAPGGAVNLY 132
Query: 122 HNALHEIGHALGLMHPGS-YNGGYPVYGVDNDYENDSFLTSVMSYF 166
ALHEIGH +GL+H YP D + + + Y
Sbjct: 133 TTALHEIGHTMGLLHTDDPDTIMYPTLKSQPDLTHHDIEGAQLMYG 178
Score = 39.8 bits (91), Expect = 1.4, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 278 DVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYLYKIYRFENAIIVYDANEHKQDF 337
+ G + +++ ++ DV +G GLDT + LY + I A
Sbjct: 179 ARLWGTAQDDLLVATNAADVINGQDGLDTVRFEGALSLYSVTDDNALNIEVYAAATGLTQ 238
Query: 338 -LSDVERLRFADQCI 351
L +VERL+F + +
Sbjct: 239 ELQNVERLQFDNGSL 253
>gi|126327134|ref|XP_001366622.1| PREDICTED: similar to matrix metalloproteinase [Monodelphis
domestica]
Length = 518
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 57/199 (28%), Gaps = 57/199 (28%)
Query: 23 WSNYFIRYKPDVLTTHRLSFDITELNPNAQE-VARWALGEWSKVVDLTFEETSIH-SDIK 80
W + Y+ T + + + AL WS V L F + +DI
Sbjct: 152 WKKNTLTYRVSKYT--------SSMTHAEVDKAVDMALQAWSNAVPLNFVRQNTGEADIM 203
Query: 81 FIS---------------SNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNAL 125
+ P + +FD A+ W G G L A
Sbjct: 204 ISFEIGDHGDSYPFDGPRGTLAHAFAP--GEGLGGDTHFDNAEKWTMGT-NGFNLFTVAA 260
Query: 126 HEIGHALGLMHPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMV 185
HE GHALGL H S S + Y + + +
Sbjct: 261 HEFGHALGLAH--------------------STDPSALMY-------PTYKYQHPYGFRL 293
Query: 186 --SDIVAVQKIYGAPKGSL 202
D+ +Q +YG K +
Sbjct: 294 PKDDVKGIQALYGPRKTAT 312
>gi|16329631|ref|NP_440359.1| iron-regulated protein [Synechocystis sp. PCC 6803]
gi|1652114|dbj|BAA17039.1| iron-regulated protein [Synechocystis sp. PCC 6803]
Length = 591
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 48/286 (16%), Positives = 84/286 (29%), Gaps = 22/286 (7%)
Query: 76 HSDIKFISSNNGYVCTPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLM 135
SDI + + + AD+ G G T N ++G A
Sbjct: 39 DSDIDDVINGKAGNDILVGLGGDDILDGGTGADIMFGGSGDDTYYVDNTGDKVGEA---- 94
Query: 136 HPGSYNGGYPVYGVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIY 195
S GG DY ++ + P + + + AT + A +
Sbjct: 95 ---SAGGGMDSVISSVDYSLNTGPFYL-----PAINGLVNNGAALATLGATKYAAYLFLS 146
Query: 196 GAPKGSLGNNIYKIEVQQKDSPFIQTIYDSGGDDLLDLTLIGGVKNYIDLNTESWSSIGG 255
+ + + I G+D LD + G +N + +I G
Sbjct: 147 EPLTRPELTPTFIENLTLTGTAII-----GEGND-LDNIIDGNGENNVLSGLGGNDTIRG 200
Query: 256 YEKNMTIAQHTVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
N TI+ + + G+ G D + GN ++ GND+ G D+ +
Sbjct: 201 LGGNDTISGGEGNDLLNGNMGEDSLNGNVGDDTVRGGQGNDIVRGGQDNDSLY--GDLGN 258
Query: 316 YKIYRFENAIIVYDANEHKQDFLSDVERLRFADQCIDSVNVKQRSI 361
++ +Y D L AD Q +
Sbjct: 259 DSVFGDLGNDTLYGG--DGNDVLDGGTDPGGADTDTADYGTVQDPV 302
Score = 50.9 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/230 (15%), Positives = 72/230 (31%), Gaps = 10/230 (4%)
Query: 93 RYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDND 152
R D +G T+ + + G PG + YG D
Sbjct: 244 RGGQDNDSLYGDLGNDSVFGDLGNDTLYGGDGNDVL---DGGTDPGGADTDTADYGTVQD 300
Query: 153 YENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKGSLGNNIYKIEVQ 212
++ ++ G + +I V ++ + + +
Sbjct: 301 PVVLPRSITLKGAGDLTLTVEKGPLGSLGIDTLLNIEEVIADGSVDNNTIDFSGADLGIT 360
Query: 213 QKDSPFIQTIYDSGGDDLLDLTLI-------GGVKNYIDLNTESWSSIGGYEKNMTIAQH 265
+Q+I SG L + G + N I + + + + G + + +I
Sbjct: 361 INVDLGMQSILISGASSPQSLVKVVNFDNVIGTIGNDIIIGDDQENILDGGKGDDSIVGF 420
Query: 266 TVIESVVGSSGNDVVIGNSANNVFFESSGNDVFDGSSGLDTFFYYAPSYL 315
++++G GND + G + N++ + D+ G G D F Y
Sbjct: 421 QKNDTLMGGHGNDTLNGRAGNDLIIGGADKDILTGGMGNDLFDYTNLKDS 470
Score = 37.1 bits (84), Expect = 9.3, Method: Composition-based stats.
Identities = 23/204 (11%), Positives = 47/204 (23%), Gaps = 14/204 (6%)
Query: 354 VNVKQRSILEYTASYEDLIQVIGQDVFESMKHFYEFGLSEGRDITFDSYLYLGSYDDLRN 413
V+ ++ A + L+ + G D+ + G D + +
Sbjct: 38 VDSDIDDVINGKAGNDILVGLGGDDILDGGTGADIMFGGSGDDTYYVDNTGDKVGEASAG 97
Query: 414 VFGSDRGAAARHYITHGVKEGRNPDAFKALEYIASHEDLINAFADAPDLVQVGKDHFSNF 473
++ + + G P A+ + ++ A A S
Sbjct: 98 GGMDSVISSVDYSLNTG------PFYLPAINGLVNNG---AALATLGATKYAAYLFLSEP 148
Query: 474 GCEEGRFVTFDSYLYLGSY-----DDLRNVFGSDRGAAARHYITHGVKEGRNPDAFKALE 528
TF L L + + G G R +
Sbjct: 149 LTRPELTPTFIENLTLTGTAIIGEGNDLDNIIDGNGENNVLSGLGGNDTIRGLGGNDTIS 208
Query: 529 YIASHEDLINAFADAPDLVQAGKD 552
++ L + G D
Sbjct: 209 GGEGNDLLNGNMGEDSLNGNVGDD 232
>gi|224043570|ref|XP_002198005.1| PREDICTED: matrix metalloproteinase-13 [Taeniopygia guttata]
Length = 485
Score = 61.3 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 59/203 (29%), Gaps = 55/203 (27%)
Query: 19 RDQYWSNYFIRYKPDVLTTH--RLSFDITELNPNAQEVARWALGEWSKVVDLTFEET-SI 75
R WS + Y+ T+ R D + A WS V L F S
Sbjct: 110 RKLKWSKMNLTYRIMNYTSDLKRNEVD---------RAFKKAFKVWSDVTPLNFTRIRSG 160
Query: 76 HSDIKFISSNN---------------GYVCTPRYDSRYFM