RPSBLAST alignment of GI: 254780384 and protein with PDBid: 1bqq

>1bqq_M CDMT1-MMP, membrane-type matrix metalloproteinase, MMP-14; matrix metalloproteinase, tissue inhibitor of metalloproteinases, proteinase complex; 2.75A {Homo sapiens} SCOP: d.92.1.11 PDB: 1buv_M Length = 174

 Score = 51.9 bits (123), Expect = 4e-07
 Identities = 29/170 (17%), Positives = 43/170 (25%), Gaps = 49/170 (28%)

Query: 52  QEVARWALGEWSKVVDLTFEETSIHSD-----------IKFISSNNGYVC---------- 90
            E  R A   W     L F E                 I F    +G             
Sbjct: 28  YEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLA 87

Query: 91  ---TPRYDSRYFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVY 147
               P  +       +  +    R     G  +   A+HE+GHALGL H    +      
Sbjct: 88  HAYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSSDPS------ 141

Query: 148 GVDNDYENDSFLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGA 197
                        ++M+ F                    D   +Q++YG 
Sbjct: 142 -------------AIMAPFYQWMD------TENFVLPDDDRRGIQQLYGG 172