RPSBLAST alignment of GI: 254780384 and protein with PDBid: 1cge
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* Length = 168
Score = 57.9 bits (139), Expect = 6e-09
Identities = 32/163 (19%), Positives = 48/163 (29%), Gaps = 42/163 (25%)
Query: 52 QEVARWALGEWSKVVDLTFEETSI-HSDIKFISSNNGYVCTPRYD-------------SR 97
A WS V LTF + S +DI + +D
Sbjct: 30 DHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPG 89
Query: 98 YFMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDS 157
+ +FD+ + W + L A HE+GH+LGL H
Sbjct: 90 IGGDAHFDEDERWTN-NFREYNLHRVAAHELGHSLGLSHSTDIG---------------- 132
Query: 158 FLTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYGAPKG 200
++M +F DI +Q IYG +
Sbjct: 133 ---ALMYPSY--------TFSGDVQLAQDDIDGIQAIYGRSQN 164