RPSBLAST alignment of GI: 254780384 and protein with PDBid: 2jsd

>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens} Length = 160
 Score = 53.8 bits (128), Expect = 1e-07
 Identities = 28/158 (17%), Positives = 39/158 (24%), Gaps = 38/158 (24%)

Query: 52  QEVARWALGEWSKVVDLTFEETS-------------IHSDIKFISSNNGYVCTPRYDSRY 98
            +    AL  WS  V L+F   +              H D        G +         
Sbjct: 27  DKAVEMALQAWSSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEG 86

Query: 99  FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
                             G  L   A HE GHALGL H    +                 
Sbjct: 87  LGGDTHFDNAEKWTMGTNGFNLFTVAAHEFGHALGLAHSTDPS----------------- 129

Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
             ++M       +       Y       D+  +Q +YG
Sbjct: 130 --ALMYPTYKYKN------PYGFHLPKDDVKGIQALYG 159