RPSBLAST alignment of GI: 254780384 and protein with PDBid: 2jsd
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens} Length = 160
Score = 53.8 bits (128), Expect = 1e-07
Identities = 28/158 (17%), Positives = 39/158 (24%), Gaps = 38/158 (24%)
Query: 52 QEVARWALGEWSKVVDLTFEETS-------------IHSDIKFISSNNGYVCTPRYDSRY 98
+ AL WS V L+F + H D G +
Sbjct: 27 DKAVEMALQAWSSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEG 86
Query: 99 FMEINFDKADVWRYGIGKGTILSHNALHEIGHALGLMHPGSYNGGYPVYGVDNDYENDSF 158
G L A HE GHALGL H +
Sbjct: 87 LGGDTHFDNAEKWTMGTNGFNLFTVAAHEFGHALGLAHSTDPS----------------- 129
Query: 159 LTSVMSYFMPQDSMMDASFGYCATPMVSDIVAVQKIYG 196
++M + Y D+ +Q +YG
Sbjct: 130 --ALMYPTYKYKN------PYGFHLPKDDVKGIQALYG 159