HHsearch alignment for GI: 254780386 and conserved domain: COG0539

>COG0539 RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis].

Probab=90.61  E-value=1.1  Score=22.79  Aligned_cols=12  Identities=25%  Similarity=0.277  Sum_probs=5.2

Q ss_pred             EECCCCEEEEEE
Q ss_conf             152377569999
Q gi|254780386|r  404 ELRNGFPAEVLF  415 (440)
Q Consensus       404 ~L~~Gm~~~~~I  415 (440)
T Consensus       486 ~~~~gd~v~a~v  497 (541)
T COG0539         486 VLKVGDEVEAVV  497 (541)
T ss_pred             HCCCCCEEEEEE
T ss_conf             235798899999