HHsearch alignment for GI: 254780386 and conserved domain: PRK09578
>PRK09578 periplasmic multidrug efflux lipoprotein precursor; Reviewed.
Probab=99.95 E-value=7.7e-26 Score=190.79 Aligned_cols=239 Identities=14% Similarity=0.168 Sum_probs=155.8
Q ss_pred EEEEEEEEEEECCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 58999799995387389846888689999857898933697899996489988899987434332332100123333222
Q gi|254780386|r 42 ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121 (440)
Q Consensus 42 ~~v~~~G~i~~~~~~~~I~s~~~G~V~~i~VkeGd~VkkGq~L~~ld~~~~~~~l~~~~~~l~~l~~~l~~~~~~l~~~~ 121 (440)
T Consensus 50 ~~~~~~G~v~a~~~-v~l~~~v~G~v~~v~v~~Gd~V~kGq~La~lD~~~~~a~~~~a~a~l~~A~a~~~~A~~------ 122 (385)
T PRK09578 50 MTVELPGRLDAYRQ-AEVRARVAGIVTARTYEEGQEVKQGAVLFRIDPAPLKAARDAAAGALAKAEAAHLAAAD------ 122 (385)
T ss_pred EEEEEEEEEEEEEE-EEEEEECCEEEEEEEECCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH------
T ss_conf 69999999998799-99996644699999807999873898899985346999999999999999999999999------
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 11455542235688887765546788654333655420011222112210022321011223222222102333322210
Q gi|254780386|r 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201 (440)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~el~~ 201 (440)
T Consensus 123 ----------------------------------------------------------------------------~~~R 126 (385)
T PRK09578 123 ----------------------------------------------------------------------------KRRR 126 (385)
T ss_pred ----------------------------------------------------------------------------HHHH
T ss_conf ----------------------------------------------------------------------------9999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 12222221110000111002466653101223322222222222100012233321123322212222222212223322
Q gi|254780386|r 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281 (440)
Q Consensus 202 ~~~l~~~~~~~~~~l~~~~~~~~~~~~el~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~e~~~~l~~~~~~l~ 281 (440)
T Consensus 127 ~~~L~~~~~is~~~~~~a~~~~~~a-------------------------------------------~a~l~~A~a~l~ 163 (385)
T PRK09578 127 YDDLVRDRAVSERDHTEAVADERQA-------------------------------------------KAEVASAKAELA 163 (385)
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHH-------------------------------------------HHHHHHHHHHHH
T ss_conf 9998863663267899999999999-------------------------------------------999999999999
Q ss_pred CCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCC--CCCCCCCCCCCEEEEEEECHHHHHHCCCC-----------CCE
Q ss_conf 12222212345554116873121201222124445--54210335565047753262231101589-----------831
Q gi|254780386|r 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKG-----------YTA 348 (440)
Q Consensus 282 ~l~~~l~~~~I~AP~~G~V~~l~~~~~G~~v~~G~--~l~~Ivp~~~~l~v~~~v~~~di~~i~~G-----------q~v 348 (440)
T Consensus 164 ~A~~~l~~t~i~AP~~G~V~~~~v-~~G~~v~~~~~~~l~~i~-~~~~~~v~~~~p~~~v~~~~~~~~~g~~~~~~~~~~ 241 (385)
T PRK09578 164 RAQLQLDYATVTAPIDGRARRALV-TEGALVGQDQATPLTTVE-QLDPIYVNFSQPAADVEALRRAVKSGRATGIAQQDV 241 (385)
T ss_pred HHHHHHHCCEECCCCCCEEEEEEC-CCCCEECCCCCCCEEEEE-ECCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCE
T ss_conf 888754103523897745888881-788656688873149998-266399999517999999987654143112356753
Q ss_pred EEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECHHHCCCCCCEECCCCEEEEEEEECEE
Q ss_conf 799981288754439999999713344467776551189999993501125678515237756999992205
Q gi|254780386|r 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420 (440)
Q Consensus 349 ~i~~~a~~~~~~~~~~G~V~~Is~~~~~~~~~~~~~~~y~v~i~~~~~~~~~~~~~L~~Gm~~~~~I~~~~~ 420 (440)
T Consensus 242 ~v~~~~~~g~~~-~~~g~v~~~~~~vd~~t------rt~~v~~~~~np-----~~~L~pGm~~~v~i~~~~~ 301 (385)
T PRK09578 242 AVTLVRADGSEY-PLKGKLLFSDLAVDPST------DTVAMRALFPNP-----ERELLPGAYVRIALDRAVD 301 (385)
T ss_pred EEEEECCCCCCC-CEEEEEEEEECCCCCCC------CEEEEEEECCCC-----CCCCCCCCEEEEEEECCCC
T ss_conf 799992699723-14689998532314776------529999965787-----5545899689999954766