HHsearch alignment for GI: 254780386 and conserved domain: PRK10476
>PRK10476 multidrug resistance protein MdtN; Provisional.
Probab=97.51 E-value=0.0018 Score=41.50 Aligned_cols=123 Identities=10% Similarity=0.116 Sum_probs=70.5
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHE-EEEEEEEEEEEEEEE-----CCCEEEEECCCCCEEEEEECCCCCE
Q ss_conf 3457633568616899999999999999987640-671258999799995-----3873898468886899998578989
Q gi|254780386|r 4 FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSIL-LPIEISVSSSGEILN-----EDNVVEIKSPFSGIIKKFQVENGSQ 77 (440)
Q Consensus 4 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~w~~~-~~~~~~v~~~G~i~~-----~~~~~~I~s~~~G~V~~i~VkeGd~ 77 (440)
T Consensus 3 ~~~~p~~~~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~TddA~V~~~iv~Is~~VsG~V~~V~V~eg-----q~VkkGq~ 77 (348)
T PRK10476 3 MAGTPKKAPRAKVIALAIVALALVALVYVIWRTDSAPSTDDAYIDADVVHVASEVGGRIVELAVTEN-----QAVKKGDL 77 (348)
T ss_pred CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHEECCCEEECCCEEEEEEEEEEECCCCEEEEEEEECCC-----CEECCCCE
T ss_conf 6789998741122789999999999876513246401436259997999993434459999994699-----98648978
Q ss_pred EECCC-EEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf 33697-8999964899888999874343323321001233332221145554223
Q gi|254780386|r 78 ILQGT-PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131 (440)
Q Consensus 78 VkkGq-~L~~ld~~~~~~~l~~~~~~l~~l~~~l~~~~~~l~~~~~~~~~~~~~~ 131 (440)
T Consensus 78 L~~LD~~~~~~~v~~A~A~l~~a~a~l~~~~~~~~~~~a~~~~a~a~~~~A~a~~ 132 (348)
T PRK10476 78 LFRIDPRPYELTVAQAQADLALADAQLDTTQRSVDAERSNAASANEQVERARANA 132 (348)
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9997768999999999999999999999998788888989999999999999999