HHsearch alignment for GI: 254780386 and conserved domain: TIGR01108
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit; InterPro: IPR005776 This family describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea . The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.; GO: 0008948 oxaloacetate decarboxylase activity, 0006814 sodium ion transport.
Probab=95.98 E-value=0.0068 Score=37.61 Aligned_cols=33 Identities=24% Similarity=0.393 Sum_probs=28.2
Q ss_pred CCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCC
Q ss_conf 1234555411687312120122212444554210
Q gi|254780386|r 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321 (440)
Q Consensus 288 ~~~~I~AP~~G~V~~l~~~~~G~~v~~G~~l~~I 321 (440)
T Consensus 550 a~~~vTaP~aG~i~~~~V-~~G~~V~~G~vlL~~ 582 (616)
T TIGR01108 550 AITDVTAPIAGSIVKITV-SEGDEVKEGEVLLVV 582 (616)
T ss_pred CCCCCCCCCCCCEEEEEE-CCCCEECCCCEEEEE
T ss_conf 898756677773699983-578743157758853