HHsearch alignment for GI: 254780386 and conserved domain: TIGR01347
>TIGR01347 sucB 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; InterPro: IPR006255 These sequences describe the TCA cycle 2-oxoglutarate system E2 component, dihydrolipoamide succinyltransferase. It is closely related to the pyruvate dehydrogenase E2 component, dihydrolipoamide acetyltransferase. Members include the mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus and are generally excluded from this group of sequences as are all examples of dihydrolipoamide acetyltransferase. ; GO: 0004149 dihydrolipoyllysine-residue succinyltransferase activity, 0006099 tricarboxylic acid cycle, 0045252 oxoglutarate dehydrogenase complex.
Probab=96.17 E-value=0.0046 Score=38.78 Aligned_cols=41 Identities=27% Similarity=0.532 Sum_probs=35.9
Q ss_pred EEEECCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEECH
Q ss_conf 99953873898468886899998578989336978999964
Q gi|254780386|r 49 EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89 (440)
Q Consensus 49 ~i~~~~~~~~I~s~~~G~V~~i~VkeGd~VkkGq~L~~ld~ 89 (440)
T Consensus 36 eiETDKV~lEV~Sp~dGvl~~~~~~eG~TV~~g~~La~~~E 76 (435)
T TIGR01347 36 EIETDKVVLEVPSPADGVLQEILEKEGDTVTSGQVLAVLEE 76 (435)
T ss_pred EEECCCEEEEEECCCCCHHHHHHCCCCCEECCCEEEEEEEC
T ss_conf 75207446788288530217430689888505507788823