HHsearch alignment for GI: 254780386 and conserved domain: cd06250
>cd06250 M14_PaAOTO_like An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases. This subgroup includes Pseudomonas aeruginosa AotO and related proteins. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. The gene encoding
Probab=94.34 E-value=0.078 Score=30.57 Aligned_cols=30 Identities=20% Similarity=0.540 Sum_probs=26.2
Q ss_pred CCCCCCEEEEECCEEECCCCCCCCCCCCCCCC
Q ss_conf 45554116873121201222124445542103
Q gi|254780386|r 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322 (440)
Q Consensus 291 ~I~AP~~G~V~~l~~~~~G~~v~~G~~l~~Iv 322 (440)
T Consensus 291 ~v~Ap~~Gi~~~~--~~~G~~V~~G~~la~I~ 320 (359)
T cd06250 291 MLYAPAGGMVVYR--AAPGDWVEAGDVLAEIL 320 (359)
T ss_pred EEECCCCEEEEEC--CCCCCEECCCCEEEEEE
T ss_conf 9956998689872--79999977999899994