Query gi|254780386|ref|YP_003064799.1| Type I secretion membrane fusion protein, HlyD [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 440
No_of_seqs 809 out of 6523
Neff 10.7
Searched_HMMs 13730
Date Wed Jun 1 05:47:39 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780386.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vf7a_ f.46.1.1 (A:) Multidru 99.9 2.4E-22 1.7E-26 164.5 7.0 221 43-418 3-237 (237)
2 d1bdoa_ b.84.1.1 (A:) Biotinyl 97.2 0.00044 3.2E-08 42.5 6.2 41 48-88 40-80 (80)
3 d1dcza_ b.84.1.1 (A:) Biotin c 97.0 0.00037 2.7E-08 43.0 4.7 29 59-87 11-39 (77)
4 d1iyua_ b.84.1.1 (A:) Lipoyl d 97.0 0.00094 6.8E-08 40.3 6.2 43 48-90 33-75 (79)
5 d1dcza_ b.84.1.1 (A:) Biotin c 96.9 0.00072 5.2E-08 41.1 5.5 31 290-321 9-39 (77)
6 d1ghja_ b.84.1.1 (A:) Lipoyl d 96.8 0.0011 7.9E-08 39.9 5.7 42 48-89 36-77 (79)
7 d1qjoa_ b.84.1.1 (A:) Lipoyl d 96.7 0.00083 6E-08 40.7 4.2 42 48-89 35-76 (80)
8 d1k8ma_ b.84.1.1 (A:) Lipoyl d 96.6 0.0017 1.2E-07 38.6 5.4 42 48-89 39-80 (87)
9 d1gjxa_ b.84.1.1 (A:) Lipoyl d 96.0 0.0013 9.3E-08 39.4 2.1 41 49-89 37-77 (81)
10 d2f3ga_ b.84.3.1 (A:) Glucose- 95.9 0.014 9.9E-07 32.6 6.7 12 291-302 40-51 (150)
11 d1laba_ b.84.1.1 (A:) Lipoyl d 95.9 0.00089 6.5E-08 40.5 0.7 38 51-88 39-76 (80)
12 d2gpra_ b.84.3.1 (A:) Glucose 95.8 0.015 1.1E-06 32.3 6.7 14 291-304 9-22 (154)
13 d1bdoa_ b.84.1.1 (A:) Biotinyl 95.7 0.0024 1.7E-07 37.7 2.3 35 287-321 2-42 (80)
14 d1iyua_ b.84.1.1 (A:) Lipoyl d 95.6 0.0048 3.5E-07 35.6 3.6 25 296-321 11-35 (79)
15 d1y8ob1 b.84.1.1 (B:128-229) L 95.4 0.012 8.7E-07 32.9 5.1 42 48-89 40-82 (102)
16 d1pmra_ b.84.1.1 (A:) Lipoyl d 95.0 0.00097 7.1E-08 40.2 -1.4 30 58-87 47-76 (80)
17 d1y8ob1 b.84.1.1 (B:128-229) L 94.9 0.0093 6.7E-07 33.7 3.3 24 297-321 19-42 (102)
18 d1gpra_ b.84.3.1 (A:) Glucose 94.7 0.042 3.1E-06 29.3 6.3 21 285-305 5-25 (158)
19 d1laba_ b.84.1.1 (A:) Lipoyl d 94.7 0.0071 5.2E-07 34.5 2.2 32 289-321 44-75 (80)
20 d1k8ma_ b.84.1.1 (A:) Lipoyl d 94.4 0.011 8.2E-07 33.1 2.7 31 290-321 48-78 (87)
21 d1ghja_ b.84.1.1 (A:) Lipoyl d 94.4 0.0078 5.7E-07 34.2 1.9 23 298-321 16-38 (79)
22 d2ix0a1 b.40.4.5 (A:83-172) Ex 94.2 0.022 1.6E-06 31.2 3.9 55 317-371 13-69 (90)
23 d1qjoa_ b.84.1.1 (A:) Lipoyl d 93.8 0.033 2.4E-06 30.0 4.2 32 289-321 43-74 (80)
24 d1gjxa_ b.84.1.1 (A:) Lipoyl d 93.5 0.014 1E-06 32.5 1.8 32 290-322 45-76 (81)
25 d1vf7a_ f.46.1.1 (A:) Multidru 93.4 0.0098 7.1E-07 33.5 0.8 30 324-354 207-236 (237)
26 d1ci3m2 b.84.2.2 (M:170-231) C 91.5 0.046 3.3E-06 29.1 2.3 15 70-84 44-58 (62)
27 d1pmra_ b.84.1.1 (A:) Lipoyl d 90.9 0.038 2.7E-06 29.6 1.4 33 288-321 44-76 (80)
28 d1brwa3 d.41.3.1 (A:331-433) P 81.9 0.42 3.1E-05 22.6 2.6 20 69-88 49-68 (103)
29 d1e2wa2 b.84.2.2 (A:169-232) C 81.5 0.14 1E-05 25.8 0.1 16 69-84 45-60 (64)
30 d1qpoa2 d.41.2.1 (A:2-116) Qui 80.1 1.2 8.6E-05 19.7 4.4 50 41-90 35-95 (115)
31 d1qwya_ b.84.3.2 (A:) Peptidog 79.8 1.3 9.6E-05 19.3 4.6 54 288-349 175-229 (270)
32 d1uoua3 d.41.3.1 (A:374-480) T 78.6 0.68 4.9E-05 21.3 2.8 26 61-88 41-66 (105)
33 d2tpta3 d.41.3.1 (A:336-440) T 74.8 0.4 2.9E-05 22.8 0.7 21 69-89 49-69 (105)
34 d1tu2b2 b.84.2.2 (B:170-235) C 73.3 0.43 3.2E-05 22.5 0.6 16 69-84 47-62 (66)
35 d1qapa2 d.41.2.1 (A:8-129) Qui 73.2 1.2 8.8E-05 19.6 2.9 27 64-90 76-102 (122)
36 d1o4ua2 d.41.2.1 (A:1-103) Qui 69.8 1.6 0.00011 18.9 2.8 26 65-90 58-83 (103)
37 d1hcza2 b.84.2.2 (A:168-230) C 69.8 1.5 0.00011 18.9 2.7 15 70-84 46-60 (63)
38 d1guta_ b.40.6.1 (A:) Molybdat 66.1 2.1 0.00015 18.0 2.8 54 361-418 6-61 (67)
39 d1vf5c2 b.84.2.2 (C:170-231) C 65.6 0.37 2.7E-05 23.0 -1.1 39 292-330 3-50 (62)
40 d2vnud1 b.40.4.5 (D:400-494) E 55.7 4.3 0.00031 15.9 4.3 68 296-370 4-71 (95)
41 d1fr3a_ b.40.6.1 (A:) Molybdat 52.8 4.8 0.00035 15.6 3.4 53 362-418 8-61 (67)
42 d2ix0a2 b.40.4.5 (A:4-82) Exor 52.1 4.9 0.00036 15.5 4.9 57 296-370 19-75 (79)
43 d1h9ma1 b.40.6.2 (A:1-73) Cyto 51.0 5.1 0.00037 15.4 3.4 53 362-418 8-62 (73)
44 d1zunb1 b.43.3.1 (B:238-329) S 49.9 5.3 0.00039 15.3 3.1 40 312-352 33-73 (92)
45 d1h9ma2 b.40.6.2 (A:74-141) Cy 45.4 6.2 0.00045 14.8 3.8 53 361-417 6-60 (68)
46 d1r5ba1 b.43.3.1 (A:460-554) E 43.7 6.6 0.00048 14.7 2.9 25 339-371 31-55 (95)
47 d1h9ra1 b.40.6.2 (A:123-199) C 41.2 7.2 0.00052 14.4 3.4 54 361-418 7-63 (77)
48 d1f60a1 b.43.3.1 (A:241-334) E 36.2 8.5 0.00062 13.9 4.2 58 339-411 27-84 (94)
49 d1h9ra2 b.40.6.2 (A:200-261) C 35.5 8.7 0.00064 13.8 3.6 50 362-417 3-54 (62)
50 d1wb1a1 b.43.3.1 (A:180-271) E 34.9 8.9 0.00065 13.8 2.0 41 311-352 32-73 (92)
51 d2axti1 f.23.37.1 (I:1-35) Pho 34.7 9 0.00065 13.8 2.7 23 16-38 3-25 (35)
52 d2cp6a1 b.34.10.1 (A:8-167) Re 32.9 9.6 0.0007 13.6 4.9 27 340-375 30-56 (160)
53 d1ixda_ b.34.10.1 (A:) Cylindr 31.9 10 0.00072 13.5 4.9 49 333-396 9-57 (104)
54 d1nppa2 b.34.5.4 (A:191-248) N 31.2 10 0.00075 13.4 3.1 27 342-373 5-31 (58)
55 d1g7sa2 b.43.3.1 (A:460-587) I 30.1 11 0.00078 13.3 3.6 45 309-354 29-74 (128)
56 d3d31a1 b.40.6.3 (A:230-348) S 28.4 11 0.00083 13.1 3.9 51 361-421 60-116 (119)
57 d1onla_ b.84.1.1 (A:) Protein 26.7 12 0.00089 12.9 3.9 11 363-373 71-81 (127)
58 d1jnya1 b.43.3.1 (A:228-322) E 26.5 12 0.00089 12.9 4.1 58 339-411 29-86 (95)
59 d2hd9a1 b.122.1.8 (A:1-145) Hy 23.8 14 0.001 12.5 3.3 21 335-355 28-48 (145)
60 d1y14b1 b.40.4.5 (B:81-171) C- 22.5 15 0.0011 12.4 4.1 59 296-357 7-72 (91)
61 d3bzka4 b.40.4.5 (A:637-730) T 22.2 15 0.0011 12.3 3.2 63 289-356 15-77 (94)
62 d1vqod1 d.77.1.1 (D:10-174) Ri 21.6 15 0.0011 12.2 2.8 10 406-415 116-125 (165)
63 d1nz9a_ b.34.5.4 (A:) N-utiliz 21.4 15 0.0011 12.2 2.9 27 341-372 4-30 (58)
64 d1kl9a2 b.40.4.5 (A:3-88) Euka 21.3 15 0.0011 12.2 4.6 34 296-341 17-50 (86)
65 d1tova_ b.34.10.1 (A:) Cytoske 20.6 16 0.0012 12.1 5.7 48 336-396 9-56 (98)
66 d1mjia_ d.77.1.1 (A:) Ribosoma 20.5 16 0.0012 12.1 3.3 14 341-354 79-92 (180)
No 1
>d1vf7a_ f.46.1.1 (A:) Multidrug resistance protein MexA domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.86 E-value=2.4e-22 Score=164.47 Aligned_cols=221 Identities=13% Similarity=0.171 Sum_probs=143.2
Q ss_pred EEEEEEEEEECCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 89997999953873898468886899998578989336978999964899888999874343323321001233332221
Q gi|254780386|r 43 SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122 (440)
Q Consensus 43 ~v~~~G~i~~~~~~~~I~s~~~G~V~~i~VkeGd~VkkGq~L~~ld~~~~~~~l~~~~~~l~~l~~~l~~~~~~l~~~~~ 122 (440)
++..+|.|.|.. ...|.|+++|+|.+++|++||.|+|||+|++||+.+....+...+.++..++++++..+
T Consensus 3 ~~~~~G~i~a~~-~~~V~s~v~G~V~~v~V~~G~~VkkGq~L~~ld~~~~~~~l~~a~a~~~~a~~~~~r~~-------- 73 (237)
T d1vf7a_ 3 NTELPGRTNAFR-IAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYK-------- 73 (237)
T ss_dssp EEEEEEECEESC-EEEECCSSCEEEEECCSCSSEEECTTSEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH--------
T ss_pred EEEEEEEEEEEE-EEEEEEECCEEEEEEECCCCCEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH--------
T ss_conf 799889999637-99998216789999987994998899999998238877665333233333222123454--------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 14555422356888877655467886543336554200112221122100223210112232222221023333222101
Q gi|254780386|r 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202 (440)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~el~~~ 202 (440)
T Consensus 74 -------------------------------------------------------------------------------- 73 (237)
T d1vf7a_ 74 -------------------------------------------------------------------------------- 73 (237)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22222211100001110024666531012233222222222221000122333211233222122222222122233221
Q gi|254780386|r 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282 (440)
Q Consensus 203 ~~l~~~~~~~~~~l~~~~~~~~~~~~el~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~e~~~~l~~~~~~l~~ 282 (440)
.+.......+.++. ..+..+.....++..
T Consensus 74 -~l~~~~~~~~~~~~--------------------------------------------------~~~~~~~~a~~~l~~ 102 (237)
T d1vf7a_ 74 -LLVADQAVSKQQYA--------------------------------------------------DANAAYLQSKAAVEQ 102 (237)
T ss_dssp -HHHHTTSSCHHHHH--------------------------------------------------HHHHHHHHHHHHHHH
T ss_pred -HHHHCCCCCCCHHH--------------------------------------------------HHHHHCCHHHHHHHH
T ss_conf -44430543220012--------------------------------------------------222200126889999
Q ss_pred CCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCCC-CCCCCEEEEEEECHHHHHHCC-------------CCCCE
Q ss_conf 2222212345554116873121201222124445542103-355650477532622311015-------------89831
Q gi|254780386|r 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVK-------------KGYTA 348 (440)
Q Consensus 283 l~~~l~~~~I~AP~~G~V~~l~~~~~G~~v~~G~~l~~Iv-p~~~~l~v~~~v~~~di~~i~-------------~Gq~v 348 (440)
++..+.++.|+||++|+|..... ..|.++.+|.....+. .+...+++.+..++.++..+. .|..+
T Consensus 103 a~~~l~~~~i~ap~~G~v~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~v 181 (237)
T d1vf7a_ 103 ARINLRYTKVLSPISGRIGRSAV-TEGALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLERAGDNAAKV 181 (237)
T ss_dssp HHHHHHTTEEECSSSEEECCCSS-CBTCEECTTCSSCSEEEECCSEEECCEEEEHHHHHHHHHHHHHTSSCEEETTEEEC
T ss_pred HHHHHCCCCCCCCHHCEEEEEEE-CCCCEECCCCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCEE
T ss_conf 75322024210420001125772-04848737863245899338510244150388777776542134200025677347
Q ss_pred EEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECHHHCCCCCCEECCCCEEEEEEEEC
Q ss_conf 7999812887544399999997133444677765511899999935011256785152377569999922
Q gi|254780386|r 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418 (440)
Q Consensus 349 ~i~~~a~~~~~~~~~~G~V~~Is~~~~~~~~~~~~~~~y~v~i~~~~~~~~~~~~~L~~Gm~~~~~I~~~ 418 (440)
.+.++..+ ...+.|+|..|++.....+ ..|.|++.+++ ++..|+|||.++|.|.+|
T Consensus 182 ~~~~~~~~---~~~~~g~v~~i~~~vd~~t------~t~~v~~~i~n-----~~~~L~pGm~v~v~i~~g 237 (237)
T d1vf7a_ 182 SLKLEDGS---QYPLEGRLEFSEVSVDEGT------GSVTIRAVFPN-----PNNELLPGMFVHAQLQEG 237 (237)
T ss_dssp CEECTTSC---EESSCCEEESSCSCCCSSS------SEEEECBEEEC-----SSSCCCTTCEEEEEEECC
T ss_pred EEEECCCC---CCEEEEEEEEEECCCCCCC------CEEEEEEEEEC-----CCCCCCCCCEEEEEEECC
T ss_conf 88603788---7138899999846384888------48999999989-----999688999899999459
No 2
>d1bdoa_ b.84.1.1 (A:) Biotinyl domain of acetyl-CoA carboxylase {Escherichia coli [TaxId: 562]}
Probab=97.17 E-value=0.00044 Score=42.49 Aligned_cols=41 Identities=24% Similarity=0.316 Sum_probs=30.7
Q ss_pred EEEEECCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEEC
Q ss_conf 99995387389846888689999857898933697899996
Q gi|254780386|r 48 GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88 (440)
Q Consensus 48 G~i~~~~~~~~I~s~~~G~V~~i~VkeGd~VkkGq~L~~ld 88 (440)
+.+....-...|.|+.+|+|.+++|++||.|..||+|+.++
T Consensus 40 ~~iEamKm~~~i~a~~~G~v~~i~v~~G~~V~~G~~L~~ie 80 (80)
T d1bdoa_ 40 CIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp EEEEETTEEEEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred EEEECCCCCEEEECCCCEEEEEEEECCCCEECCCCEEEEEC
T ss_conf 99991760289995898499899968979989999999979
No 3
>d1dcza_ b.84.1.1 (A:) Biotin carboxyl carrier domain of transcarboxylase (TC 1.3S) {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=97.03 E-value=0.00037 Score=43.03 Aligned_cols=29 Identities=28% Similarity=0.631 Sum_probs=12.6
Q ss_pred EECCCCCEEEEEECCCCCEEECCCEEEEE
Q ss_conf 84688868999985789893369789999
Q gi|254780386|r 59 IKSPFSGIIKKFQVENGSQILQGTPLLTF 87 (440)
Q Consensus 59 I~s~~~G~V~~i~VkeGd~VkkGq~L~~l 87 (440)
|.||.+|+|.+++|++||.|++||+|+.+
T Consensus 11 v~ap~~G~v~~~~V~~Gd~V~~G~~l~~v 39 (77)
T d1dcza_ 11 IPAPLAGTVSKILVKEGDTVKAGQTVLVL 39 (77)
T ss_dssp EEBSSSCEEEEECCCTTCEECTTSEEEEE
T ss_pred EECCCCCEEEEEECCCCCEEECCCEEEEE
T ss_conf 98998959999996799999589769999
No 4
>d1iyua_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=96.96 E-value=0.00094 Score=40.34 Aligned_cols=43 Identities=21% Similarity=0.433 Sum_probs=35.9
Q ss_pred EEEEECCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEECHH
Q ss_conf 9999538738984688868999985789893369789999648
Q gi|254780386|r 48 GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90 (440)
Q Consensus 48 G~i~~~~~~~~I~s~~~G~V~~i~VkeGd~VkkGq~L~~ld~~ 90 (440)
..+....-...|.|+.+|+|.+++|++||.|+.||+|+.++..
T Consensus 33 ~~iE~~K~~~~i~a~~~G~v~~i~v~~G~~V~~G~~l~~ie~~ 75 (79)
T d1iyua_ 33 VVLESAKASMEVPSPKAGVVKSVSVKLGDKLKEGDAIIELEPA 75 (79)
T ss_dssp EEEECSSCEEEEECSSSSEEEEESCCTTCEEETTSEEEEEECC
T ss_pred EEEEECCCEEEEEECCCCEEEEEEECCCCEECCCCEEEEEECC
T ss_conf 9999367178998036648999850898998899999999467
No 5
>d1dcza_ b.84.1.1 (A:) Biotin carboxyl carrier domain of transcarboxylase (TC 1.3S) {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=96.93 E-value=0.00072 Score=41.11 Aligned_cols=31 Identities=19% Similarity=0.318 Sum_probs=20.7
Q ss_pred CCCCCCCEEEEECCEEECCCCCCCCCCCCCCC
Q ss_conf 34555411687312120122212444554210
Q gi|254780386|r 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321 (440)
Q Consensus 290 ~~I~AP~~G~V~~l~~~~~G~~v~~G~~l~~I 321 (440)
..|+||+.|+|..+.+ ..|+.|..|++|+.+
T Consensus 9 ~~v~ap~~G~v~~~~V-~~Gd~V~~G~~l~~v 39 (77)
T d1dcza_ 9 GEIPAPLAGTVSKILV-KEGDTVKAGQTVLVL 39 (77)
T ss_dssp SEEEBSSSCEEEEECC-CTTCEECTTSEEEEE
T ss_pred CEEECCCCCEEEEEEC-CCCCEEECCCEEEEE
T ss_conf 9798998959999996-799999589769999
No 6
>d1ghja_ b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate dehydrogenase complex {Azotobacter vinelandii [TaxId: 354]}
Probab=96.84 E-value=0.0011 Score=39.92 Aligned_cols=42 Identities=21% Similarity=0.378 Sum_probs=36.3
Q ss_pred EEEEECCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEECH
Q ss_conf 999953873898468886899998578989336978999964
Q gi|254780386|r 48 GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89 (440)
Q Consensus 48 G~i~~~~~~~~I~s~~~G~V~~i~VkeGd~VkkGq~L~~ld~ 89 (440)
-.+....-...|.||.+|+|.+++|++||.|..|++|+.+++
T Consensus 36 ~~vEt~K~~~ei~a~~~G~v~~i~v~~Gd~v~~G~~l~~i~~ 77 (79)
T d1ghja_ 36 VDIETDKVVMEVLAEADGVIAEIVKNEGDTVLSGELLGKLTE 77 (79)
T ss_dssp EEEECSSCEEEEECSSCEEEEEESSCTTCEECTTCEEEEECC
T ss_pred EEEECCCEEEEEEECEEEEEEEEECCCCCEECCCCEEEEEEC
T ss_conf 999857239999824049999998199999889999999947
No 7
>d1qjoa_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Escherichia coli [TaxId: 562]}
Probab=96.68 E-value=0.00083 Score=40.69 Aligned_cols=42 Identities=24% Similarity=0.583 Sum_probs=35.1
Q ss_pred EEEEECCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEECH
Q ss_conf 999953873898468886899998578989336978999964
Q gi|254780386|r 48 GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89 (440)
Q Consensus 48 G~i~~~~~~~~I~s~~~G~V~~i~VkeGd~VkkGq~L~~ld~ 89 (440)
..+....-...|.|+.+|+|.+++|++||.|+.|++|+.++.
T Consensus 35 ~~iEt~K~~~~v~a~~~G~v~~i~v~~G~~V~~G~~l~~ie~ 76 (80)
T d1qjoa_ 35 ITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEV 76 (80)
T ss_dssp EEEESSSSCEEEEBSSCEEEEECCCCTTCEECTTCCCEEEES
T ss_pred EEEECCCCCCEEECCEEEEEEEEEECCCCEECCCCEEEEEEC
T ss_conf 999957666238387067999998289999889999999965
No 8
>d1k8ma_ b.84.1.1 (A:) Lipoyl domain of the mitochondrial branched-chain alpha-ketoacid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.62 E-value=0.0017 Score=38.65 Aligned_cols=42 Identities=29% Similarity=0.465 Sum_probs=33.6
Q ss_pred EEEEECCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEECH
Q ss_conf 999953873898468886899998578989336978999964
Q gi|254780386|r 48 GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89 (440)
Q Consensus 48 G~i~~~~~~~~I~s~~~G~V~~i~VkeGd~VkkGq~L~~ld~ 89 (440)
..+....-...|.||.+|+|.+++|++||.|+.|++|+.++.
T Consensus 39 ~~vEt~K~~~~v~A~~~G~I~~i~v~~G~~v~~G~~l~~i~~ 80 (87)
T d1k8ma_ 39 CEVQSDKASVTITSRYDGVIKKLYYNLDDIAYVGKPLVDIET 80 (87)
T ss_dssp EEEECSSCEEECCCSSCEEEEEECCCSSCEECTTSEEEEEEC
T ss_pred EEEECCCCEEEEEECCCEEEEEEEECCCCEECCCCEEEEEEC
T ss_conf 999846716889908999999998589999789999999976
No 9
>d1gjxa_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Neisseria meningitidis [TaxId: 487]}
Probab=96.04 E-value=0.0013 Score=39.44 Aligned_cols=41 Identities=17% Similarity=0.460 Sum_probs=24.2
Q ss_pred EEEECCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEECH
Q ss_conf 99953873898468886899998578989336978999964
Q gi|254780386|r 49 EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89 (440)
Q Consensus 49 ~i~~~~~~~~I~s~~~G~V~~i~VkeGd~VkkGq~L~~ld~ 89 (440)
.+........|.|+.+|+|.+++|++||.|+.|++|+.++.
T Consensus 37 ~iEt~K~~~~i~a~~~G~i~~i~v~~G~~v~~G~~l~~ie~ 77 (81)
T d1gjxa_ 37 TLETDKATMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEA 77 (81)
T ss_dssp EEECSSCEEEECCCCSSBBCCCCCCSSCEECSSSCCCEECC
T ss_pred EEECCCCEEEEEEEEEEEEEEEEECCCCEECCCCEEEEEEC
T ss_conf 99947748798743258999998089899889999999944
No 10
>d2f3ga_ b.84.3.1 (A:) Glucose-specific factor III (glsIII) {Escherichia coli [TaxId: 562]}
Probab=95.86 E-value=0.014 Score=32.58 Aligned_cols=12 Identities=33% Similarity=0.656 Sum_probs=4.9
Q ss_pred CCCCCCEEEEEC
Q ss_conf 455541168731
Q gi|254780386|r 291 TILSPIAGTIVY 302 (440)
Q Consensus 291 ~I~AP~~G~V~~ 302 (440)
.|.||+||+|..
T Consensus 40 ~v~AP~dG~V~~ 51 (150)
T d2f3ga_ 40 KMVAPVDGTIGK 51 (150)
T ss_dssp EEECSSSEEEEE
T ss_pred EEEEECCEEEEE
T ss_conf 299510879999
No 11
>d1laba_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.85 E-value=0.00089 Score=40.48 Aligned_cols=38 Identities=34% Similarity=0.549 Sum_probs=18.1
Q ss_pred EECCCEEEEECCCCCEEEEEECCCCCEEECCCEEEEEC
Q ss_conf 95387389846888689999857898933697899996
Q gi|254780386|r 51 LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88 (440)
Q Consensus 51 ~~~~~~~~I~s~~~G~V~~i~VkeGd~VkkGq~L~~ld 88 (440)
....-...|.||.+|+|.+++|++||.|+.|++|+.++
T Consensus 39 Et~K~~~ei~A~~~G~v~~i~v~~Gd~v~~G~~l~~ie 76 (80)
T d1laba_ 39 QNDKAVVEIPSPVKGKVLEILVPEGTVATVGQTLITLD 76 (80)
T ss_dssp ECSSCEEEECCSSCEECCCBSSCSSSEECSSSCSBCBB
T ss_pred ECCCEEEEEECCCCEEEEEEEECCCCEECCCCEEEEEE
T ss_conf 82647999985899999999858989978999999994
No 12
>d2gpra_ b.84.3.1 (A:) Glucose permease IIa domain, IIa-glc {Mycoplasma capricolum [TaxId: 2095]}
Probab=95.78 E-value=0.015 Score=32.26 Aligned_cols=14 Identities=36% Similarity=0.636 Sum_probs=5.9
Q ss_pred CCCCCCEEEEECCE
Q ss_conf 45554116873121
Q gi|254780386|r 291 TILSPIAGTIVYNQ 304 (440)
Q Consensus 291 ~I~AP~~G~V~~l~ 304 (440)
.|.||++|.+..+.
T Consensus 9 ~i~aP~~G~vi~l~ 22 (154)
T d2gpra_ 9 KVLAPCDGTIITLD 22 (154)
T ss_dssp EEECSSSEEEECGG
T ss_pred EEEECCCCEEEECC
T ss_conf 99962773698811
No 13
>d1bdoa_ b.84.1.1 (A:) Biotinyl domain of acetyl-CoA carboxylase {Escherichia coli [TaxId: 562]}
Probab=95.70 E-value=0.0024 Score=37.66 Aligned_cols=35 Identities=14% Similarity=0.181 Sum_probs=24.5
Q ss_pred CCCCCCCCCCEEEEECCE------EECCCCCCCCCCCCCCC
Q ss_conf 212345554116873121------20122212444554210
Q gi|254780386|r 287 REQKTILSPIAGTIVYNQ------SFSSSNYAQQSQPLMKI 321 (440)
Q Consensus 287 l~~~~I~AP~~G~V~~l~------~~~~G~~v~~G~~l~~I 321 (440)
++-..|+||..|+++... +...|+.|..|++|+.|
T Consensus 2 ~sg~~I~aPm~G~~~~~~~p~~~~~V~~Gd~V~~Gq~l~~i 42 (80)
T d1bdoa_ 2 ISGHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIV 42 (80)
T ss_dssp CCSEEEECSSSEEEESSSSTTSCCSCCTTCEECTTCEEEEE
T ss_pred CCCCEEECCCCEEEEECCCCCCCEECCCCCEEECCCEEEEE
T ss_conf 88999868986799915899988091279859089999999
No 14
>d1iyua_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=95.60 E-value=0.0048 Score=35.62 Aligned_cols=25 Identities=12% Similarity=0.151 Sum_probs=13.2
Q ss_pred CEEEEECCEEECCCCCCCCCCCCCCC
Q ss_conf 11687312120122212444554210
Q gi|254780386|r 296 IAGTIVYNQSFSSSNYAQQSQPLMKI 321 (440)
Q Consensus 296 ~~G~V~~l~~~~~G~~v~~G~~l~~I 321 (440)
.+|.|..+.+ ..|+.|..|++|+.|
T Consensus 11 ~~g~i~~~~v-~~Gd~V~~gd~l~~i 35 (79)
T d1iyua_ 11 GDGEVIELLV-KTGDLIEVEQGLVVL 35 (79)
T ss_dssp SEEEEEEECC-CTTCBCCSSSEEEEE
T ss_pred CCEEEEEEEE-CCCCEEECCCEEEEE
T ss_conf 9789999993-699999368519999
No 15
>d1y8ob1 b.84.1.1 (B:128-229) Lipoyl domain of dihydrolipoamide acetyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.43 E-value=0.012 Score=32.95 Aligned_cols=42 Identities=24% Similarity=0.411 Sum_probs=30.1
Q ss_pred EEEEECCCEEEEECCCCCEEEEEECCCCC-EEECCCEEEEECH
Q ss_conf 99995387389846888689999857898-9336978999964
Q gi|254780386|r 48 GEILNEDNVVEIKSPFSGIIKKFQVENGS-QILQGTPLLTFED 89 (440)
Q Consensus 48 G~i~~~~~~~~I~s~~~G~V~~i~VkeGd-~VkkGq~L~~ld~ 89 (440)
..|....-...|.|+.+|+|.++++.+|| .|.-|++|+.+..
T Consensus 40 ~~vETdK~~~ei~a~~~G~l~~i~v~eGd~~v~vG~~ia~i~~ 82 (102)
T d1y8ob1 40 AEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVE 82 (102)
T ss_dssp EEEECSSCEEEEECCSCEEEEEESSCTTCCSEETTCEEEEEES
T ss_pred EEEECCCEEEEEECCCCEEEEEEEECCCCEEECCCCEEEEEEC
T ss_conf 9998484789885287689999897469979749998999955
No 16
>d1pmra_ b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate dehydrogenase complex {Escherichia coli [TaxId: 562]}
Probab=95.05 E-value=0.00097 Score=40.23 Aligned_cols=30 Identities=17% Similarity=0.306 Sum_probs=11.5
Q ss_pred EEECCCCCEEEEEECCCCCEEECCCEEEEE
Q ss_conf 984688868999985789893369789999
Q gi|254780386|r 58 EIKSPFSGIIKKFQVENGSQILQGTPLLTF 87 (440)
Q Consensus 58 ~I~s~~~G~V~~i~VkeGd~VkkGq~L~~l 87 (440)
.|.||.+|+|.+++|++||.|+.|++|+.+
T Consensus 47 ev~a~~~G~l~~i~v~~Gd~v~~G~~l~~i 76 (80)
T d1pmra_ 47 EVPASADGILDAVLEDEGTTVTSRQILGRL 76 (80)
T ss_dssp CCBCCSBCCCCBCTTCTTCEECSSSEEEBC
T ss_pred EEECCCCEEEEEEEECCCCEECCCCEEEEE
T ss_conf 995157899999876899998799999999
No 17
>d1y8ob1 b.84.1.1 (B:128-229) Lipoyl domain of dihydrolipoamide acetyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.93 E-value=0.0093 Score=33.69 Aligned_cols=24 Identities=17% Similarity=0.181 Sum_probs=11.0
Q ss_pred EEEEECCEEECCCCCCCCCCCCCCC
Q ss_conf 1687312120122212444554210
Q gi|254780386|r 297 AGTIVYNQSFSSSNYAQQSQPLMKI 321 (440)
Q Consensus 297 ~G~V~~l~~~~~G~~v~~G~~l~~I 321 (440)
.|+|....+ +.|+.|..|++|+.|
T Consensus 19 eg~i~~w~v-~~Gd~V~~gd~l~~v 42 (102)
T d1y8ob1 19 MGTVQRWEK-KVGEKLSEGDLLAEI 42 (102)
T ss_dssp EEEEEEECS-CTTCEECTTCEEEEE
T ss_pred EEEEEEEEE-CCCCEEECCCCEEEE
T ss_conf 799989990-899999637529999
No 18
>d1gpra_ b.84.3.1 (A:) Glucose permease IIa domain, IIa-glc {Bacillus subtilis [TaxId: 1423]}
Probab=94.71 E-value=0.042 Score=29.28 Aligned_cols=21 Identities=24% Similarity=0.330 Sum_probs=12.2
Q ss_pred CCCCCCCCCCCCEEEEECCEE
Q ss_conf 222123455541168731212
Q gi|254780386|r 285 KTREQKTILSPIAGTIVYNQS 305 (440)
Q Consensus 285 ~~l~~~~I~AP~~G~V~~l~~ 305 (440)
.+.....|.||++|.+..+..
T Consensus 5 ~~~~~~~i~aP~~G~vi~L~~ 25 (158)
T d1gpra_ 5 NEIGEEVFVSPITGEIHPITD 25 (158)
T ss_dssp CTTSCBCCBCSSSEEEEEGGG
T ss_pred CCCCCEEEEECCCCEEEEHHH
T ss_conf 446987999447867988013
No 19
>d1laba_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.66 E-value=0.0071 Score=34.45 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=16.9
Q ss_pred CCCCCCCCEEEEECCEEECCCCCCCCCCCCCCC
Q ss_conf 234555411687312120122212444554210
Q gi|254780386|r 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321 (440)
Q Consensus 289 ~~~I~AP~~G~V~~l~~~~~G~~v~~G~~l~~I 321 (440)
...|.||.+|+|..+.+ ..|+.|..|++|+.|
T Consensus 44 ~~ei~A~~~G~v~~i~v-~~Gd~v~~G~~l~~i 75 (80)
T d1laba_ 44 VVEIPSPVKGKVLEILV-PEGTVATVGQTLITL 75 (80)
T ss_dssp EEEECCSSCEECCCBSS-CSSSEECSSSCSBCB
T ss_pred EEEEECCCCEEEEEEEE-CCCCEECCCCEEEEE
T ss_conf 99998589999999985-898997899999999
No 20
>d1k8ma_ b.84.1.1 (A:) Lipoyl domain of the mitochondrial branched-chain alpha-ketoacid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.41 E-value=0.011 Score=33.14 Aligned_cols=31 Identities=29% Similarity=0.255 Sum_probs=16.0
Q ss_pred CCCCCCCEEEEECCEEECCCCCCCCCCCCCCC
Q ss_conf 34555411687312120122212444554210
Q gi|254780386|r 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321 (440)
Q Consensus 290 ~~I~AP~~G~V~~l~~~~~G~~v~~G~~l~~I 321 (440)
..|.||.+|+|..+.+ ..|+.|..|++|+.|
T Consensus 48 ~~v~A~~~G~I~~i~v-~~G~~v~~G~~l~~i 78 (87)
T d1k8ma_ 48 VTITSRYDGVIKKLYY-NLDDIAYVGKPLVDI 78 (87)
T ss_dssp EECCCSSCEEEEEECC-CSSCEECTTSEEEEE
T ss_pred EEEEECCCEEEEEEEE-CCCCEECCCCEEEEE
T ss_conf 8899089999999985-899997899999999
No 21
>d1ghja_ b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate dehydrogenase complex {Azotobacter vinelandii [TaxId: 354]}
Probab=94.38 E-value=0.0078 Score=34.18 Aligned_cols=23 Identities=13% Similarity=0.286 Sum_probs=8.3
Q ss_pred EEEECCEEECCCCCCCCCCCCCCC
Q ss_conf 687312120122212444554210
Q gi|254780386|r 298 GTIVYNQSFSSSNYAQQSQPLMKI 321 (440)
Q Consensus 298 G~V~~l~~~~~G~~v~~G~~l~~I 321 (440)
|+|....+ +.|+.|.+|++|+.|
T Consensus 16 g~i~~w~v-~~Gd~V~~gd~l~~v 38 (79)
T d1ghja_ 16 GTVATWHK-KPGEAVKRDELIVDI 38 (79)
T ss_dssp EEECCCSS-CTTSEECSSCEEEEE
T ss_pred EEEEEEEC-CCCCEEEECCCEEEE
T ss_conf 99999983-899999608669999
No 22
>d2ix0a1 b.40.4.5 (A:83-172) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=94.22 E-value=0.022 Score=31.16 Aligned_cols=55 Identities=16% Similarity=0.105 Sum_probs=45.2
Q ss_pred CCCCCCCCCCCEEEEEEECHHHH--HHCCCCCCEEEEEEECCCCCCCEEEEEEEEEE
Q ss_conf 54210335565047753262231--10158983179998128875443999999971
Q gi|254780386|r 317 PLMKIVPHSKLTYIRAKVTPKQI--QHVKKGYTATVRFPHYADIREKKFKAIIEKID 371 (440)
Q Consensus 317 ~l~~Ivp~~~~l~v~~~v~~~di--~~i~~Gq~v~i~~~a~~~~~~~~~~G~V~~Is 371 (440)
..+.++|++..+.-..+|+.... ...+.||.|.+.+..||......+.|+|+.|=
T Consensus 13 ~~~fVvPd~~ri~~~I~I~~~~~~~~~ak~Gd~Vvvei~~~P~~~~~~~~g~I~evl 69 (90)
T d2ix0a1 13 DRLAIVPDHPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELTQYI 69 (90)
T ss_dssp SSEEEEESCTTCCSCEEEEECTTCCCCCCTTCEEEEEEEECGGGTCSSCEEEEEEEC
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEE
T ss_conf 989998599853664412643244556789979999997688778998658998987
No 23
>d1qjoa_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Escherichia coli [TaxId: 562]}
Probab=93.84 E-value=0.033 Score=29.97 Aligned_cols=32 Identities=13% Similarity=0.217 Sum_probs=16.2
Q ss_pred CCCCCCCCEEEEECCEEECCCCCCCCCCCCCCC
Q ss_conf 234555411687312120122212444554210
Q gi|254780386|r 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321 (440)
Q Consensus 289 ~~~I~AP~~G~V~~l~~~~~G~~v~~G~~l~~I 321 (440)
...|.||.+|+|..+.+ ..|+.|..|++|+.|
T Consensus 43 ~~~v~a~~~G~v~~i~v-~~G~~V~~G~~l~~i 74 (80)
T d1qjoa_ 43 SMEVPAPFAGVVKELKV-NVGDKVKTGSLIMIF 74 (80)
T ss_dssp CEEEEBSSCEEEEECCC-CTTCEECTTCCCEEE
T ss_pred CCEEECCEEEEEEEEEE-CCCCEECCCCEEEEE
T ss_conf 62383870679999982-899998899999999
No 24
>d1gjxa_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Neisseria meningitidis [TaxId: 487]}
Probab=93.54 E-value=0.014 Score=32.51 Aligned_cols=32 Identities=6% Similarity=0.115 Sum_probs=16.9
Q ss_pred CCCCCCCEEEEECCEEECCCCCCCCCCCCCCCC
Q ss_conf 345554116873121201222124445542103
Q gi|254780386|r 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322 (440)
Q Consensus 290 ~~I~AP~~G~V~~l~~~~~G~~v~~G~~l~~Iv 322 (440)
..|.||.+|+|..+.+ ..|+.|..|++|+.|-
T Consensus 45 ~~i~a~~~G~i~~i~v-~~G~~v~~G~~l~~ie 76 (81)
T d1gjxa_ 45 MDVPAEVAGVVKEVKV-KVGDKISEGGLIVVVE 76 (81)
T ss_dssp EEECCCCSSBBCCCCC-CSSCEECSSSCCCEEC
T ss_pred EEEEEEEEEEEEEEEE-CCCCEECCCCEEEEEE
T ss_conf 7987432589999980-8989988999999994
No 25
>d1vf7a_ f.46.1.1 (A:) Multidrug resistance protein MexA domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=93.38 E-value=0.0098 Score=33.53 Aligned_cols=30 Identities=13% Similarity=0.133 Sum_probs=23.9
Q ss_pred CCCCEEEEEEECHHHHHHCCCCCCEEEEEEE
Q ss_conf 5565047753262231101589831799981
Q gi|254780386|r 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354 (440)
Q Consensus 324 ~~~~l~v~~~v~~~di~~i~~Gq~v~i~~~a 354 (440)
....+.|.+.||..| +.+++||.|+++++.
T Consensus 207 ~t~t~~v~~~i~n~~-~~L~pGm~v~v~i~~ 236 (237)
T d1vf7a_ 207 GTGSVTIRAVFPNPN-NELLPGMFVHAQLQE 236 (237)
T ss_dssp SSSEEEECBEEECSS-SCCCTTCEEEEEEEC
T ss_pred CCCEEEEEEEEECCC-CCCCCCCEEEEEEEC
T ss_conf 884899999998999-968899989999945
No 26
>d1ci3m2 b.84.2.2 (M:170-231) Cytochrome f, small domain {Phormidium laminosum [TaxId: 32059]}
Probab=91.52 E-value=0.046 Score=29.07 Aligned_cols=15 Identities=27% Similarity=0.585 Sum_probs=8.0
Q ss_pred EECCCCCEEECCCEE
Q ss_conf 985789893369789
Q gi|254780386|r 70 FQVENGSQILQGTPL 84 (440)
Q Consensus 70 i~VkeGd~VkkGq~L 84 (440)
+.|++||.|++||.|
T Consensus 44 l~V~eGd~V~aG~~L 58 (62)
T d1ci3m2 44 LIVSEGEEVAAGAAL 58 (62)
T ss_dssp BCCCTTCEECTTCBS
T ss_pred EEECCCCEEECCCCC
T ss_conf 788799999589714
No 27
>d1pmra_ b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate dehydrogenase complex {Escherichia coli [TaxId: 562]}
Probab=90.89 E-value=0.038 Score=29.63 Aligned_cols=33 Identities=9% Similarity=0.019 Sum_probs=16.2
Q ss_pred CCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCC
Q ss_conf 1234555411687312120122212444554210
Q gi|254780386|r 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321 (440)
Q Consensus 288 ~~~~I~AP~~G~V~~l~~~~~G~~v~~G~~l~~I 321 (440)
....|.||.+|+|..+.+ ..|+.|..|++|+.|
T Consensus 44 ~~~ev~a~~~G~l~~i~v-~~Gd~v~~G~~l~~i 76 (80)
T d1pmra_ 44 VVLEVPASADGILDAVLE-DEGTTVTSRQILGRL 76 (80)
T ss_dssp CCCCCBCCSBCCCCBCTT-CTTCEECSSSEEEBC
T ss_pred EEEEEECCCCEEEEEEEE-CCCCEECCCCEEEEE
T ss_conf 599995157899999876-899998799999999
No 28
>d1brwa3 d.41.3.1 (A:331-433) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=81.91 E-value=0.42 Score=22.61 Aligned_cols=20 Identities=20% Similarity=0.390 Sum_probs=11.9
Q ss_pred EEECCCCCEEECCCEEEEEC
Q ss_conf 99857898933697899996
Q gi|254780386|r 69 KFQVENGSQILQGTPLLTFE 88 (440)
Q Consensus 69 ~i~VkeGd~VkkGq~L~~ld 88 (440)
.++++.||.|++||+|+++.
T Consensus 49 ~l~~k~Gd~V~~Gd~l~~i~ 68 (103)
T d1brwa3 49 VLHKKIGDRVQKGEALATIH 68 (103)
T ss_dssp EESCCTTCEECTTCEEEEEE
T ss_pred EEECCCCCEECCCCEEEEEE
T ss_conf 99626899976999499998
No 29
>d1e2wa2 b.84.2.2 (A:169-232) Cytochrome f, small domain {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=81.50 E-value=0.14 Score=25.78 Aligned_cols=16 Identities=25% Similarity=0.540 Sum_probs=9.7
Q ss_pred EEECCCCCEEECCCEE
Q ss_conf 9985789893369789
Q gi|254780386|r 69 KFQVENGSQILQGTPL 84 (440)
Q Consensus 69 ~i~VkeGd~VkkGq~L 84 (440)
.+.|++||.|++||.|
T Consensus 45 ~l~V~eGd~V~~G~~L 60 (64)
T d1e2wa2 45 DLIVKEGQTVQADQPL 60 (64)
T ss_dssp CBCCCTTCEECTTCBC
T ss_pred EEEECCCCEEECCCCC
T ss_conf 6888899999589735
No 30
>d1qpoa2 d.41.2.1 (A:2-116) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=80.11 E-value=1.2 Score=19.66 Aligned_cols=50 Identities=20% Similarity=0.285 Sum_probs=31.6
Q ss_pred EEEEEEEEEEEECCCEEEE---------E--CCCCCEEEEEECCCCCEEECCCEEEEECHH
Q ss_conf 2589997999953873898---------4--688868999985789893369789999648
Q gi|254780386|r 41 EISVSSSGEILNEDNVVEI---------K--SPFSGIIKKFQVENGSQILQGTPLLTFEDI 90 (440)
Q Consensus 41 ~~~v~~~G~i~~~~~~~~I---------~--s~~~G~V~~i~VkeGd~VkkGq~L~~ld~~ 90 (440)
+....+++++....+-..- . .+..+.--..++++|+.|++|++++++...
T Consensus 35 ~~~~~~~A~i~ake~gVlaG~~~~~~if~~l~~~~~i~~~~~~~DG~~v~~G~~I~~i~G~ 95 (115)
T d1qpoa2 35 PASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQ 95 (115)
T ss_dssp CTTCEEEEEEEESSCEECCCHHHHHHHHHHHHCTTSEEEEEECCTTCEECTTCEEEEEEEE
T ss_pred CCCCEEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCEEEEEEECH
T ss_conf 8887499999987988523199999999996244440013404787887224049998322
No 31
>d1qwya_ b.84.3.2 (A:) Peptidoglycan hydrolase LytM {Staphylococcus aureus [TaxId: 1280]}
Probab=79.83 E-value=1.3 Score=19.32 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=27.4
Q ss_pred CCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCE-EEEEEECHHHHHHCCCCCCEE
Q ss_conf 12345554116873121201222124445542103355650-477532622311015898317
Q gi|254780386|r 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT-YIRAKVTPKQIQHVKKGYTAT 349 (440)
Q Consensus 288 ~~~~I~AP~~G~V~~l~~~~~G~~v~~G~~l~~Ivp~~~~l-~v~~~v~~~di~~i~~Gq~v~ 349 (440)
.-+.|+|+.+|+|........| -|.. +.|--.+..+ .+-+.+.. + .|++||.|+
T Consensus 175 ~GtpV~A~~dG~V~~ag~~~~g----~G~~-V~I~h~~g~~~t~Y~hl~~--~-~V~~Gq~V~ 229 (270)
T d1qwya_ 175 ENSPVYSLTDGTVVQAGWSNYG----GGNQ-VTIKEANSNNYQWYMHNNR--L-TVSAGDKVK 229 (270)
T ss_dssp TTCEEECSSSEEEEEEEEETTT----TEEE-EEEEETTSSEEEEEEEESE--E-CCCTTCEEC
T ss_pred CCCEEEEEECEEEEEEEECCCC----CCEE-EEEEECCCCEEEEEEECCE--E-ECCCCCEEC
T ss_conf 9996994108799998975679----9869-9997089887999983772--1-138899998
No 32
>d1uoua3 d.41.3.1 (A:374-480) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.63 E-value=0.68 Score=21.25 Aligned_cols=26 Identities=27% Similarity=0.428 Sum_probs=18.3
Q ss_pred CCCCCEEEEEECCCCCEEECCCEEEEEC
Q ss_conf 6888689999857898933697899996
Q gi|254780386|r 61 SPFSGIIKKFQVENGSQILQGTPLLTFE 88 (440)
Q Consensus 61 s~~~G~V~~i~VkeGd~VkkGq~L~~ld 88 (440)
.+.-|+ .++++.||.|++||+|+++.
T Consensus 41 D~~vGi--~l~~k~Gd~V~~G~~l~~ih 66 (105)
T d1uoua3 41 RLGVGA--ELLVDVGQRLRRGTPWLRVH 66 (105)
T ss_dssp CSSCEE--EECSCTTCEECTTCEEEEEE
T ss_pred CCCCCE--EEEECCCCEECCCCEEEEEE
T ss_conf 755557--99605889986999399998
No 33
>d2tpta3 d.41.3.1 (A:336-440) Thymidine phosphorylase {Escherichia coli [TaxId: 562]}
Probab=74.77 E-value=0.4 Score=22.78 Aligned_cols=21 Identities=19% Similarity=0.165 Sum_probs=15.9
Q ss_pred EEECCCCCEEECCCEEEEECH
Q ss_conf 998578989336978999964
Q gi|254780386|r 69 KFQVENGSQILQGTPLLTFED 89 (440)
Q Consensus 69 ~i~VkeGd~VkkGq~L~~ld~ 89 (440)
.++++.||.|++||+|+++..
T Consensus 49 ~l~~k~Gd~V~~Gd~l~~i~~ 69 (105)
T d2tpta3 49 TDMARLGDQVDGQRPLAVIHA 69 (105)
T ss_dssp ESCCCTTCEEBTTBCSEEEEE
T ss_pred EEEECCCCEECCCCEEEEEEC
T ss_conf 998358899769995999977
No 34
>d1tu2b2 b.84.2.2 (B:170-235) Cytochrome f, small domain {Anabaena sp., strain PCC 7120 [TaxId: 1167]}
Probab=73.27 E-value=0.43 Score=22.54 Aligned_cols=16 Identities=25% Similarity=0.520 Sum_probs=9.5
Q ss_pred EEECCCCCEEECCCEE
Q ss_conf 9985789893369789
Q gi|254780386|r 69 KFQVENGSQILQGTPL 84 (440)
Q Consensus 69 ~i~VkeGd~VkkGq~L 84 (440)
++.|++||.|++||+|
T Consensus 47 eLiVseG~~VkadqpL 62 (66)
T d1tu2b2 47 ELIVSEGQAVTAGDAL 62 (66)
T ss_dssp CBSCCTTCEECTTCBS
T ss_pred EEEECCCCEEECCCCC
T ss_conf 6898289889669866
No 35
>d1qapa2 d.41.2.1 (A:8-129) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=73.16 E-value=1.2 Score=19.58 Aligned_cols=27 Identities=11% Similarity=0.330 Sum_probs=21.7
Q ss_pred CCEEEEEECCCCCEEECCCEEEEECHH
Q ss_conf 868999985789893369789999648
Q gi|254780386|r 64 SGIIKKFQVENGSQILQGTPLLTFEDI 90 (440)
Q Consensus 64 ~G~V~~i~VkeGd~VkkGq~L~~ld~~ 90 (440)
.++--++++++|+.|++|++++++...
T Consensus 76 ~~i~~~~~~~DG~~v~~G~~i~~i~G~ 102 (122)
T d1qapa2 76 DDVRLTWHVDDGDAIHANQTVFELQGP 102 (122)
T ss_dssp TSSEEEESCCTTCEECTTCEEEEEEEE
T ss_pred CCEEEEECCCCCCEEECCCEEEEEEEC
T ss_conf 863887324673278648469999871
No 36
>d1o4ua2 d.41.2.1 (A:1-103) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=69.83 E-value=1.6 Score=18.85 Aligned_cols=26 Identities=27% Similarity=0.420 Sum_probs=21.5
Q ss_pred CEEEEEECCCCCEEECCCEEEEECHH
Q ss_conf 68999985789893369789999648
Q gi|254780386|r 65 GIIKKFQVENGSQILQGTPLLTFEDI 90 (440)
Q Consensus 65 G~V~~i~VkeGd~VkkGq~L~~ld~~ 90 (440)
|.-..+++++|+.|++|++++++...
T Consensus 58 ~~~v~~~~~dG~~v~~g~~I~~i~G~ 83 (103)
T d1o4ua2 58 GLLSKFNVEDGEYLEGTGVIGEIEGN 83 (103)
T ss_dssp TCEEEESCCTTCEEESCEEEEEEEEE
T ss_pred CCCEEEECCCCCEEECCCEEEEEECC
T ss_conf 60125653779987759459999551
No 37
>d1hcza2 b.84.2.2 (A:168-230) Cytochrome f, small domain {Turnip (Brassica rapa) [TaxId: 3711]}
Probab=69.78 E-value=1.5 Score=18.94 Aligned_cols=15 Identities=33% Similarity=0.532 Sum_probs=7.8
Q ss_pred EECCCCCEEECCCEE
Q ss_conf 985789893369789
Q gi|254780386|r 70 FQVENGSQILQGTPL 84 (440)
Q Consensus 70 i~VkeGd~VkkGq~L 84 (440)
+.|++||.|++||+|
T Consensus 46 LiVseG~~V~adqpL 60 (63)
T d1hcza2 46 LLVSEGESIKLDQPL 60 (63)
T ss_dssp BCCCTTCEECTTCBS
T ss_pred EEECCCCEEECCCCC
T ss_conf 898089999779756
No 38
>d1guta_ b.40.6.1 (A:) Molybdate/tungstate binding protein MOP {Clostridium pasteurianum, MOP II [TaxId: 1501]}
Probab=66.06 E-value=2.1 Score=18.00 Aligned_cols=54 Identities=6% Similarity=0.193 Sum_probs=28.5
Q ss_pred CEEEEEEEEEECCCCCCCC--CCCCCEEEEEEEEECHHHCCCCCCEECCCCEEEEEEEEC
Q ss_conf 4399999997133444677--765511899999935011256785152377569999922
Q gi|254780386|r 361 KKFKAIIEKIDPIISQQDN--NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418 (440)
Q Consensus 361 ~~~~G~V~~Is~~~~~~~~--~~~~~~~y~v~i~~~~~~~~~~~~~L~~Gm~~~~~I~~~ 418 (440)
..|+|+|+.|.+......- .-.++....+.|+.. +. .+..|.||+.+-+.|+.-
T Consensus 6 N~l~g~V~~I~~~~~~~~V~l~l~~g~~l~a~IT~~--s~--~~L~L~~G~~V~a~iKa~ 61 (67)
T d1guta_ 6 NQLKGKVVGLKKGVVTAEVVLEIAGGNKITSIISLD--SV--EELGVKEGAELTAVVKST 61 (67)
T ss_dssp CEEEEEEEEEEECSSEEEEEEEETTSCEEEEEEEHH--HH--HHHTCCTTCEEEEECCGG
T ss_pred HEEEEEEEEEEECCCCEEEEEEECCCCEEEEECCHH--HH--HHCCCCCCCEEEEEEEHH
T ss_conf 478899999998997489999959999999990889--99--777999999999999934
No 39
>d1vf5c2 b.84.2.2 (C:170-231) Cytochrome f, small domain {Mastigocladus laminosus [TaxId: 83541]}
Probab=65.58 E-value=0.37 Score=23.03 Aligned_cols=39 Identities=13% Similarity=0.225 Sum_probs=22.2
Q ss_pred CCCCCEEEEECCEEECCCC----C---C--CCCCCCCCCCCCCCCEEE
Q ss_conf 5554116873121201222----1---2--444554210335565047
Q gi|254780386|r 292 ILSPIAGTIVYNQSFSSSN----Y---A--QQSQPLMKIVPHSKLTYI 330 (440)
Q Consensus 292 I~AP~~G~V~~l~~~~~G~----~---v--~~G~~l~~Ivp~~~~l~v 330 (440)
..||.+|+|..+.....|. | + ..|..+..++|....|.|
T Consensus 3 y~AsaaG~Is~I~~~ekg~~~~gy~vtI~t~dG~~v~~~IP~GpeLiV 50 (62)
T d1vf5c2 3 FTASATGTITKIAKEEDEYGNVKYQVSIQTDSGKTVVDTIPAGPELIV 50 (62)
T ss_dssp CCCSSSSCCCBCCCCCCCSSCCCCCCBCCCCSSSCCCCCCCSSSCCCC
T ss_pred ECCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEE
T ss_conf 226567488898764578765426999987999998874089985897
No 40
>d2vnud1 b.40.4.5 (D:400-494) Exosome complex exonuclease RRP44 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=55.66 E-value=4.3 Score=15.89 Aligned_cols=68 Identities=7% Similarity=0.059 Sum_probs=43.8
Q ss_pred CEEEEECCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEE
Q ss_conf 116873121201222124445542103355650477532622311015898317999812887544399999997
Q gi|254780386|r 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370 (440)
Q Consensus 296 ~~G~V~~l~~~~~G~~v~~G~~l~~Ivp~~~~l~v~~~v~~~di~~i~~Gq~v~i~~~a~~~~~~~~~~G~V~~I 370 (440)
+-|++... +.+.. ..+...+-++|++..+- ..+|+..+.+.. .|+.|.++++.||... ..=.|+|..|
T Consensus 4 ~vG~l~~~---~~~~~-~~~~~~~~v~P~d~rip-~i~I~~~~~~~~-~g~~Vvv~I~~w~~~~-~~P~G~i~~v 71 (95)
T d2vnud1 4 YVGQLAPS---SVDPQ-SSSTQNVFVILMDKCLP-KVRIRTRRAAEL-LDKRIVISIDSWPTTH-KYPLGHFVRD 71 (95)
T ss_dssp EEEEECGG---GCCTT-CCSCEEEEEEESSTTSC-CEEEEETTGGGG-TTEEEEEEEEECCTTC-SSCEEEEEEE
T ss_pred EEEEEECC---CCCCC-CCCCCEEEEEECCCCCC-CEECCCCCHHHH-CCCEEEEEEEECCCCC-CCCCEEEEEE
T ss_conf 48999756---66767-78755699978998778-614360224675-8989999990158888-8977899997
No 41
>d1fr3a_ b.40.6.1 (A:) Molybdate/tungstate binding protein MOP {Sporomusa ovata [TaxId: 2378]}
Probab=52.80 E-value=4.8 Score=15.59 Aligned_cols=53 Identities=15% Similarity=0.098 Sum_probs=26.9
Q ss_pred EEEEEEEEEECCCCCCCCC-CCCCEEEEEEEEECHHHCCCCCCEECCCCEEEEEEEEC
Q ss_conf 3999999971334446777-65511899999935011256785152377569999922
Q gi|254780386|r 362 KFKAIIEKIDPIISQQDNN-LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418 (440)
Q Consensus 362 ~~~G~V~~Is~~~~~~~~~-~~~~~~y~v~i~~~~~~~~~~~~~L~~Gm~~~~~I~~~ 418 (440)
.|+|+|..|.+......-. .-++..+.+.|+.. +. .+..|.+|+.+-|.|+.-
T Consensus 8 ~l~g~V~~I~~~~~~~~V~l~~~g~~l~a~IT~~--s~--~~L~L~~G~~V~a~iKas 61 (67)
T d1fr3a_ 8 KLEATVKEIVKGTVMAKIVMDYKGTELVAAITID--SV--ADLDLVPGDKVTALVKAT 61 (67)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTEEEEEEEEHH--HH--HHHTCCTTCEEEEEECGG
T ss_pred EEEEEEEEEEECCCEEEEEEEECCCEEEEECCHH--HH--HHCCCCCCCEEEEEEEHH
T ss_conf 8999999999899839999997990999993989--99--766999999999999904
No 42
>d2ix0a2 b.40.4.5 (A:4-82) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=52.09 E-value=4.9 Score=15.52 Aligned_cols=57 Identities=12% Similarity=0.170 Sum_probs=38.8
Q ss_pred CEEEEECCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEE
Q ss_conf 116873121201222124445542103355650477532622311015898317999812887544399999997
Q gi|254780386|r 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370 (440)
Q Consensus 296 ~~G~V~~l~~~~~G~~v~~G~~l~~Ivp~~~~l~v~~~v~~~di~~i~~Gq~v~i~~~a~~~~~~~~~~G~V~~I 370 (440)
+.|+|.. +. ..-++| .|++. =+++||+.+.+..-.|+.|.+.+. +. .+.-.|+|..|
T Consensus 19 ~~G~i~~-~~-~G~GFv---------~~d~~---~DifI~~~~~~~A~~GD~V~v~i~--~~--~~r~eg~I~~i 75 (79)
T d2ix0a2 19 AEGVVKA-TE-KGFGFL---------EVDAQ---KSYFIPPPQMKKVMHGDRIIAVIH--SE--KERESAEPEEL 75 (79)
T ss_dssp EEEEEEC-CC---CEEE---------EEETT---EEEEECHHHHTTCCTTCEEEEEEE--CC----CCEEEEEEE
T ss_pred EEEEEEE-EC-CCCEEE---------EECCC---CCEEECHHHHCCCCCCCEEEEEEE--EC--CCCEEEEEEEE
T ss_conf 9999999-57-985899---------87899---748979799867889999999999--57--99678999999
No 43
>d1h9ma1 b.40.6.2 (A:1-73) Cytoplasmic molybdate-binding protein ModG {Azotobacter vinelandii [TaxId: 354]}
Probab=50.96 E-value=5.1 Score=15.40 Aligned_cols=53 Identities=11% Similarity=0.176 Sum_probs=28.1
Q ss_pred EEEEEEEEEECCCCCCCC--CCCCCEEEEEEEEECHHHCCCCCCEECCCCEEEEEEEEC
Q ss_conf 399999997133444677--765511899999935011256785152377569999922
Q gi|254780386|r 362 KFKAIIEKIDPIISQQDN--NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418 (440)
Q Consensus 362 ~~~G~V~~Is~~~~~~~~--~~~~~~~y~v~i~~~~~~~~~~~~~L~~Gm~~~~~I~~~ 418 (440)
.|+|+|+.|.+......- .-.++....+.|+.. +. .+..|.||+.+-|.|+.-
T Consensus 8 ~l~g~V~~I~~~~~~~~V~l~~~~g~~l~A~IT~~--S~--~~L~L~~G~~V~a~iKas 62 (73)
T d1h9ma1 8 VFKGTVSALKEGAVNAEVDILLGGGDKLAAVVTLE--SA--RSLQLAAGKEVVAVVKAP 62 (73)
T ss_dssp EEEEEEEEEEECSSEEEEEEEESSSCEEEEEEEHH--HH--HHTTCCTTCEEEEEECGG
T ss_pred EEEEEEEEEEECCCCEEEEEEECCCCEEEEECCHH--HH--HHCCCCCCCEEEEEEECC
T ss_conf 99999999996899799999989998999992889--99--667999999999999755
No 44
>d1zunb1 b.43.3.1 (B:238-329) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain 2-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=49.90 E-value=5.3 Score=15.29 Aligned_cols=40 Identities=10% Similarity=0.319 Sum_probs=15.7
Q ss_pred CCCCCCCCCCCCCCCCEEEE-EEECHHHHHHCCCCCCEEEEE
Q ss_conf 24445542103355650477-532622311015898317999
Q gi|254780386|r 312 AQQSQPLMKIVPHSKLTYIR-AKVTPKQIQHVKKGYTATVRF 352 (440)
Q Consensus 312 v~~G~~l~~Ivp~~~~l~v~-~~v~~~di~~i~~Gq~v~i~~ 352 (440)
+..|+.|. +.|.+....|. ..+...+......|+.|.+.+
T Consensus 33 v~~Gd~v~-i~Psg~~~~Vk~I~~~~~~~~~a~~G~~v~l~L 73 (92)
T d1zunb1 33 VHKGDEIV-VLPSGKSSRVKSIVTFEGELEQAGPGQAVTLTM 73 (92)
T ss_dssp EETTCEEE-ETTTCCEEEEEEEEETTEEESEECTTCEEEEEE
T ss_pred EECCCEEE-ECCCCCEEEEEEEEECCCCCCEECCCCEEEEEE
T ss_conf 96699999-889995288767798574568895999989997
No 45
>d1h9ma2 b.40.6.2 (A:74-141) Cytoplasmic molybdate-binding protein ModG {Azotobacter vinelandii [TaxId: 354]}
Probab=45.42 E-value=6.2 Score=14.84 Aligned_cols=53 Identities=15% Similarity=0.204 Sum_probs=27.0
Q ss_pred CEEEEEEEEEECCCCCCCC--CCCCCEEEEEEEEECHHHCCCCCCEECCCCEEEEEEEE
Q ss_conf 4399999997133444677--76551189999993501125678515237756999992
Q gi|254780386|r 361 KKFKAIIEKIDPIISQQDN--NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417 (440)
Q Consensus 361 ~~~~G~V~~Is~~~~~~~~--~~~~~~~y~v~i~~~~~~~~~~~~~L~~Gm~~~~~I~~ 417 (440)
..|+|+|..|.+......- .-.++..+.+.|+.. +. ....|.+|+.+-|.|+.
T Consensus 6 N~l~g~V~~I~~~~~~~~V~l~~~~g~~l~a~IT~~--s~--~~L~L~~G~~V~a~iKa 60 (68)
T d1h9ma2 6 NILTGTVKTIETGAVNAEVTLALQGGTEITSMVTKE--AV--AELGLKPGASASAVIKA 60 (68)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTSCEEEEEEEHH--HH--HHTTCCTTCEEEEEECG
T ss_pred HEEEEEEEEEEECCCCEEEEEEECCCCEEEEEECHH--HH--HHCCCCCCCEEEEEEEC
T ss_conf 278899999998998689999949999999991889--99--66799999999999983
No 46
>d1r5ba1 b.43.3.1 (A:460-554) Eukaryotic peptide chain release factor ERF2, post-G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=43.71 E-value=6.6 Score=14.67 Aligned_cols=25 Identities=16% Similarity=-0.003 Sum_probs=12.7
Q ss_pred HHHCCCCCCEEEEEEECCCCCCCEEEEEEEEEE
Q ss_conf 110158983179998128875443999999971
Q gi|254780386|r 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371 (440)
Q Consensus 339 i~~i~~Gq~v~i~~~a~~~~~~~~~~G~V~~Is 371 (440)
-+.|++|+++.+ +|.. ..++|.+|-
T Consensus 31 sG~i~~gd~v~i----~P~~----~~~~Vk~I~ 55 (95)
T d1r5ba1 31 AGSIKKNSNVLV----MPIN----QTLEVTAIY 55 (95)
T ss_dssp BSEEETTEEEEE----ETTT----EEEEEEEEE
T ss_pred ECEEECCCEEEE----ECCC----CEEEEEEEE
T ss_conf 676967999999----4179----889999999
No 47
>d1h9ra1 b.40.6.2 (A:123-199) C-terminal domain of molybdate-dependent transcriptional regulator ModE {Escherichia coli [TaxId: 562]}
Probab=41.16 E-value=7.2 Score=14.42 Aligned_cols=54 Identities=17% Similarity=0.135 Sum_probs=25.8
Q ss_pred CEEEEEEEEEECCCCCCCC---CCCCCEEEEEEEEECHHHCCCCCCEECCCCEEEEEEEEC
Q ss_conf 4399999997133444677---765511899999935011256785152377569999922
Q gi|254780386|r 361 KKFKAIIEKIDPIISQQDN---NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418 (440)
Q Consensus 361 ~~~~G~V~~Is~~~~~~~~---~~~~~~~y~v~i~~~~~~~~~~~~~L~~Gm~~~~~I~~~ 418 (440)
..|.|+|+.|.+......- -..|+..+.+.|+... -.+..|.+|+.+-+.|+.-
T Consensus 7 N~l~g~V~~I~~~~~~~~V~v~l~~g~~~l~A~IT~~S----~~~L~L~~G~~V~a~iKAs 63 (77)
T d1h9ra1 7 NQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQS----GARLGLDEGKEVLILLKAP 63 (77)
T ss_dssp EEEEEEEEEECCCSSEEEEEEEETTSSCEEEEEEEHHH----HHHHTCCTTCEEEEEECGG
T ss_pred CEEEEEEEEEEECCCCEEEEEEECCCCEEEEEEECHHH----HHHCCCCCCCEEEEEEECC
T ss_conf 38888999999899748999998899989999957899----9756999999999999868
No 48
>d1f60a1 b.43.3.1 (A:241-334) Elongation factor eEF-1alpha, domain 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.20 E-value=8.5 Score=13.91 Aligned_cols=58 Identities=14% Similarity=0.203 Sum_probs=27.8
Q ss_pred HHHCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECHHHCCCCCCEECCCCEE
Q ss_conf 1101589831799981288754439999999713344467776551189999993501125678515237756
Q gi|254780386|r 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411 (440)
Q Consensus 339 i~~i~~Gq~v~i~~~a~~~~~~~~~~G~V~~Is~~~~~~~~~~~~~~~y~v~i~~~~~~~~~~~~~L~~Gm~~ 411 (440)
.+.|++|+.+.+ +|.. .+++|.+|-..-...+....|. .|.+.+..... ..+..||-.
T Consensus 27 ~G~i~~Gd~v~i----~P~~----~~~~VksI~~~~~~~~~a~aG~---~v~l~l~~i~~----~~i~rG~vl 84 (94)
T d1f60a1 27 TGVIKPGMVVTF----APAG----VTTEVKSVEMHHEQLEQGVPGD---NVGFNVKNVSV----KEIRRGNVC 84 (94)
T ss_dssp BSCBCTTCEEEE----ETTT----EEEEEEEEEETTEECSCBCTTC---EEEEEESSCCT----TTSCTTCEE
T ss_pred CCCCCCCCEEEE----CCCC----CEEEEEEEEECCCCCCEECCCC---EEEEEEECCCH----HHCCCCCEE
T ss_conf 146878989998----8678----3279999999584768764898---59999857608----754787898
No 49
>d1h9ra2 b.40.6.2 (A:200-261) C-terminal domain of molybdate-dependent transcriptional regulator ModE {Escherichia coli [TaxId: 562]}
Probab=35.46 E-value=8.7 Score=13.84 Aligned_cols=50 Identities=18% Similarity=0.201 Sum_probs=22.1
Q ss_pred EEEEEEEEEECCCCCCCCC--CCCCEEEEEEEEECHHHCCCCCCEECCCCEEEEEEEE
Q ss_conf 3999999971334446777--6551189999993501125678515237756999992
Q gi|254780386|r 362 KFKAIIEKIDPIISQQDNN--LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417 (440)
Q Consensus 362 ~~~G~V~~Is~~~~~~~~~--~~~~~~y~v~i~~~~~~~~~~~~~L~~Gm~~~~~I~~ 417 (440)
.|.|+|..|.+.....+-. -.++......++ . .....|.||-.+.|.|+.
T Consensus 3 ~l~G~V~~I~~g~v~aeV~l~l~~g~~l~A~iT--~----~~~L~L~~G~~v~A~~KA 54 (62)
T d1h9ra2 3 QLPGIISHIERGAEQCEVLMALPDGQTLCATVP--V----NEATSLQQGQNVTAYFNA 54 (62)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTSCEEEEEEE--T----GGGTTCCTTCEEEEEECG
T ss_pred EEEEEEEEEEECCCCEEEEEEECCCCEEEEEEE--C----HHHCCCCCCCEEEEEEEC
T ss_conf 568999999989970699999699999999986--8----888499999999999965
No 50
>d1wb1a1 b.43.3.1 (A:180-271) Elongation factor SelB, domains 2 and 4 {Methanococcus maripaludis [TaxId: 39152]}
Probab=34.89 E-value=8.9 Score=13.78 Aligned_cols=41 Identities=15% Similarity=0.220 Sum_probs=18.5
Q ss_pred CCCCCCCCCCCCCCCCCEEEE-EEECHHHHHHCCCCCCEEEEE
Q ss_conf 124445542103355650477-532622311015898317999
Q gi|254780386|r 311 YAQQSQPLMKIVPHSKLTYIR-AKVTPKQIQHVKKGYTATVRF 352 (440)
Q Consensus 311 ~v~~G~~l~~Ivp~~~~l~v~-~~v~~~di~~i~~Gq~v~i~~ 352 (440)
.+..|+.|. +.|.+....|. ..+....+.....|+.|-+.+
T Consensus 32 ~i~~gd~v~-i~P~~~~~~VksI~~~~~~~~~a~aGd~v~l~L 73 (92)
T d1wb1a1 32 IVKVGDELK-VLPINMSTKVRSIQYFKESVMEAKAGDRVGMAI 73 (92)
T ss_dssp CCCSSEEEC-CTTTCCCEEECCBCGGGSCBCCCCSSCCCCEEC
T ss_pred EEECCCEEE-EECCCCCEEEEEEEECCCEEEEECCCCEEEEEE
T ss_conf 581697699-723587067776668581424808998977998
No 51
>d2axti1 f.23.37.1 (I:1-35) Photosystem II reaction center protein I, PsbI {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=34.70 E-value=9 Score=13.76 Aligned_cols=23 Identities=17% Similarity=0.239 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHEE
Q ss_conf 68999999999999999876406
Q gi|254780386|r 16 SLKRMTLLSIIGIIGLITWSILL 38 (440)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~w~~~~ 38 (440)
..++..|.++++|+++.++.+++
T Consensus 3 tLKi~Vy~vV~fFv~lFiFGFLS 25 (35)
T d2axti1 3 TLKITVYIVVTFFVLLFVFGFLS 25 (35)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEHHHHHHHHHHHHHHHHCC
T ss_conf 38874166899999999986305
No 52
>d2cp6a1 b.34.10.1 (A:8-167) Restin {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.90 E-value=9.6 Score=13.57 Aligned_cols=27 Identities=11% Similarity=0.069 Sum_probs=19.7
Q ss_pred HHCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCC
Q ss_conf 101589831799981288754439999999713344
Q gi|254780386|r 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375 (440)
Q Consensus 340 ~~i~~Gq~v~i~~~a~~~~~~~~~~G~V~~Is~~~~ 375 (440)
..+++|+.|.| + |.-.|+|.+|+++..
T Consensus 30 ~~~~vGdrV~v-----~----g~~~G~vr~iG~~~~ 56 (160)
T d2cp6a1 30 RELKIGDRVLV-----G----GTKAGVVRFLGETDF 56 (160)
T ss_dssp SCCCSSCEEEE-----T----TTEEEEEEEEEECSS
T ss_pred CCCCCCCEEEE-----C----CCCEEEEEEECCCCC
T ss_conf 78740898898-----9----997189998355688
No 53
>d1ixda_ b.34.10.1 (A:) Cylindromatosis tumour-suppressor Cyld {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.92 E-value=10 Score=13.46 Aligned_cols=49 Identities=18% Similarity=0.220 Sum_probs=30.8
Q ss_pred EECHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECHH
Q ss_conf 3262231101589831799981288754439999999713344467776551189999993501
Q gi|254780386|r 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396 (440)
Q Consensus 333 ~v~~~di~~i~~Gq~v~i~~~a~~~~~~~~~~G~V~~Is~~~~~~~~~~~~~~~y~v~i~~~~~ 396 (440)
.+|+.+-..+++|+.|.|. + .+.+.|+|.+|.+..... ..| +=|++++.
T Consensus 9 ~~p~~~~~~l~vG~rV~V~----~---~~~~~G~vryvG~~~~~~------g~~--~GVeldd~ 57 (104)
T d1ixda_ 9 AMPPGNSHGLEVGSLAEVK----E---NPPFYGVIRWIGQPPGLN------EVL--AGLELEDE 57 (104)
T ss_dssp CCTTTSSSCCCTTSEEEEC----S---SSCCCEEEEEEECCSSSC------CCE--EEEEESSC
T ss_pred CCCCCCCCCCCCCCEEEEC----C---CCCCEEEEEEEECCCCCC------CCE--EEEEECCC
T ss_conf 5798888888368988989----9---897279998872589989------758--99996788
No 54
>d1nppa2 b.34.5.4 (A:191-248) N-utilization substance G protein NusG, C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=31.18 E-value=10 Score=13.38 Aligned_cols=27 Identities=22% Similarity=0.306 Sum_probs=20.0
Q ss_pred CCCCCCEEEEEEECCCCCCCEEEEEEEEEECC
Q ss_conf 15898317999812887544399999997133
Q gi|254780386|r 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373 (440)
Q Consensus 342 i~~Gq~v~i~~~a~~~~~~~~~~G~V~~Is~~ 373 (440)
+++|+.|+|. +=| |..|.|+|..|.+.
T Consensus 5 f~~Gd~V~I~--~Gp---F~g~~g~V~~i~~~ 31 (58)
T d1nppa2 5 FEKGDQVRVI--EGP---FMNFTGTVEEVHPE 31 (58)
T ss_dssp CCTTCEEEEC--SST---TTTCEEEEEEEEGG
T ss_pred CCCCCEEEEC--CCC---CCCCEEEEEEECCC
T ss_conf 2599999991--268---99989999998288
No 55
>d1g7sa2 b.43.3.1 (A:460-587) Initiation factor IF2/eIF5b, domains 2 and 4 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=30.09 E-value=11 Score=13.26 Aligned_cols=45 Identities=11% Similarity=0.220 Sum_probs=24.7
Q ss_pred CCCCCCCCCCCCCCCCCCCEEE-EEEECHHHHHHCCCCCCEEEEEEE
Q ss_conf 2212444554210335565047-753262231101589831799981
Q gi|254780386|r 309 SNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPH 354 (440)
Q Consensus 309 G~~v~~G~~l~~Ivp~~~~l~v-~~~v~~~di~~i~~Gq~v~i~~~a 354 (440)
++.+.+|++|+. .|.+..-.| ........+...+.|+.|.|.+..
T Consensus 29 sG~ik~G~~l~~-~p~~~~g~VksIq~~~~~v~~A~~G~~Vai~I~g 74 (128)
T d1g7sa2 29 TGVIRQGYPLMN-DDGETVGTVESMQDKGENLKSASRGQKVAMAIKD 74 (128)
T ss_dssp EEEEETTCEEEC-TTSCEEEEEEEEEETTEEESEEETTCCEEEEEET
T ss_pred EEEECCCCEEEE-CCCCCEEEEEEEEECCCCCCEECCCCEEEEEECC
T ss_conf 526308997998-8999358999999988211178289989999768
No 56
>d3d31a1 b.40.6.3 (A:230-348) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=28.37 E-value=11 Score=13.07 Aligned_cols=51 Identities=14% Similarity=0.116 Sum_probs=28.1
Q ss_pred CEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECHHH---C---CCCCCEECCCCEEEEEEEECEEE
Q ss_conf 4399999997133444677765511899999935011---2---56785152377569999922054
Q gi|254780386|r 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA---F---SDNNIELRNGFPAEVLFTAKNTT 421 (440)
Q Consensus 361 ~~~~G~V~~Is~~~~~~~~~~~~~~~y~v~i~~~~~~---~---~~~~~~L~~Gm~~~~~I~~~~~~ 421 (440)
..|.|+|..+..... .+.+.+...... . ......|.+|-.+.+.+....-.
T Consensus 60 N~l~g~V~~~~~~G~----------~~~v~l~~g~~~~~~v~~~~~~~~~l~~G~~V~v~~~~~~~~ 116 (119)
T d3d31a1 60 NSLQGRVTEAWVLGA----------LVRVKVDCGVPLNVLITRRSAEEMELSPGVQIYARFKASSVH 116 (119)
T ss_dssp EEEEEEEEEEEECSS----------EEEEEEESSSEEEEEEETTHHHHSCCCTTCEEEEEECGGGCE
T ss_pred EEEEEEEEEEEECCC----------EEEEEEEECCEEEEEEECCCHHHCCCCCCCEEEEEECHHHEE
T ss_conf 588889989999899----------699999719989999962724206949799999999369899
No 57
>d1onla_ b.84.1.1 (A:) Protein H of glycine cleavage system {Thermus thermophilus [TaxId: 274]}
Probab=26.69 E-value=12 Score=12.87 Aligned_cols=11 Identities=9% Similarity=0.093 Sum_probs=6.6
Q ss_pred EEEEEEEEECC
Q ss_conf 99999997133
Q gi|254780386|r 363 FKAIIEKIDPI 373 (440)
Q Consensus 363 ~~G~V~~Is~~ 373 (440)
+.|+|..+-..
T Consensus 71 vsG~Vv~vN~~ 81 (127)
T d1onla_ 71 VAGEIVEVNLA 81 (127)
T ss_dssp SSEEEEEECTH
T ss_pred CCCEEEEEHHH
T ss_conf 46258888065
No 58
>d1jnya1 b.43.3.1 (A:228-322) Elongation factor eEF-1alpha, domain 2 {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=26.52 E-value=12 Score=12.85 Aligned_cols=58 Identities=9% Similarity=0.086 Sum_probs=28.0
Q ss_pred HHHCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECHHHCCCCCCEECCCCEE
Q ss_conf 1101589831799981288754439999999713344467776551189999993501125678515237756
Q gi|254780386|r 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411 (440)
Q Consensus 339 i~~i~~Gq~v~i~~~a~~~~~~~~~~G~V~~Is~~~~~~~~~~~~~~~y~v~i~~~~~~~~~~~~~L~~Gm~~ 411 (440)
.+.|++|+.+.+ +|.. ..++|.+|...-...+....|. .|.+.+.... ...+++||-.
T Consensus 29 ~G~i~~gd~v~i----~P~~----~~~~VksI~~~~~~~~~a~aG~---~v~l~l~~i~----~~~i~rG~vl 86 (95)
T d1jnya1 29 SGVLKVGDKIVF----MPAG----KVGEVRSIETHHTKMDKAEPGD---NIGFNVRGVE----KKDIKRGDVV 86 (95)
T ss_dssp BSCEETTCEEEE----ETTT----EEEEEEEEEETTEEESEECTTC---EEEEEEESSC----GGGCCTTCEE
T ss_pred ECCCCCCCEEEE----EECC----CEEEEEEEEECCCCCCEEECCC---CEEEEEECCC----HHHCCCCCEE
T ss_conf 421248999999----8089----6479999885697457892898---6999997685----8742897999
No 59
>d2hd9a1 b.122.1.8 (A:1-145) Hypothetical protein PH1033 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=23.79 E-value=14 Score=12.52 Aligned_cols=21 Identities=14% Similarity=0.180 Sum_probs=15.5
Q ss_pred CHHHHHHCCCCCCEEEEEEEC
Q ss_conf 622311015898317999812
Q gi|254780386|r 335 TPKQIQHVKKGYTATVRFPHY 355 (440)
Q Consensus 335 ~~~di~~i~~Gq~v~i~~~a~ 355 (440)
...-+.+|++|+.+.+.....
T Consensus 28 k~~~~~rikpGD~li~Y~~~~ 48 (145)
T d2hd9a1 28 HKNTLSRVKPGDKLVIYVRQE 48 (145)
T ss_dssp GHHHHTTCCTTCEEEEEECCE
T ss_pred CHHHHHHCCCCCEEEEEECCC
T ss_conf 630685378999999996763
No 60
>d1y14b1 b.40.4.5 (B:81-171) C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.53 E-value=15 Score=12.36 Aligned_cols=59 Identities=10% Similarity=0.034 Sum_probs=29.7
Q ss_pred CEEEEECCEEECCCCCCCCCCCCCCCCCCC---CCEEEE----EEECHHHHHHCCCCCCEEEEEEECCC
Q ss_conf 116873121201222124445542103355---650477----53262231101589831799981288
Q gi|254780386|r 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHS---KLTYIR----AKVTPKQIQHVKKGYTATVRFPHYAD 357 (440)
Q Consensus 296 ~~G~V~~l~~~~~G~~v~~G~~l~~Ivp~~---~~l~v~----~~v~~~di~~i~~Gq~v~i~~~a~~~ 357 (440)
++|+|..++ .-|-+|.-|. +=-++|.. +.+... ..+-...-..++.|+.|++++.+.+.
T Consensus 7 ~~g~I~~v~--~~G~fv~lg~-~eg~i~~~~l~~~~~~d~~~~~~~~~~~~~~~~~Gd~VrvkV~~v~~ 72 (91)
T d1y14b1 7 VDGTVVSCS--QHGFEVQVGP-MKVFVTKHLMPQDLTFNAGSNPPSYQSSEDVITIKSRIRVKIEGCIS 72 (91)
T ss_dssp EEEEEEEEE--TTEEEEEETT-EEEEEEGGGSCTTCEECC-----CEECSSCEECTTCEEEEEEEEEEE
T ss_pred EEEEEEEEE--EEEEEEEECC-EEEEEEHHHCCCCEEECCCCCEEEECCCCEEEECCCEEEEEEEEEEC
T ss_conf 999999898--1689999758-49999954447633781554516861367499689999999999824
No 61
>d3bzka4 b.40.4.5 (A:637-730) Tex S1-domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.25 E-value=15 Score=12.33 Aligned_cols=63 Identities=14% Similarity=0.057 Sum_probs=30.2
Q ss_pred CCCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHCCCCCCEEEEEEECC
Q ss_conf 23455541168731212012221244455421033556504775326223110158983179998128
Q gi|254780386|r 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356 (440)
Q Consensus 289 ~~~I~AP~~G~V~~l~~~~~G~~v~~G~~l~~Ivp~~~~l~v~~~v~~~di~~i~~Gq~v~i~~~a~~ 356 (440)
...+=.-+.|+|..+. .-|-+|.-+..+--++|..+--+ -++ +.--..+++||.|.+++...+
T Consensus 15 ~~k~G~iv~g~V~~v~--~~G~~V~l~~~i~G~i~~~~ls~--~~~-~~~~~~~~vGq~v~~~V~~id 77 (94)
T d3bzka4 15 DLKPGMVLEGVVTNVT--NFGAFVDIGVHQDGLVHISALSE--KFV-KDPYEVVKAGDIVKVKVMEVD 77 (94)
T ss_dssp GCCTTCEEEEEEEEEE--TTEEEEECSSSSCEEEEGGGGCS--SCC-SCHHHHCCTTCEEEEEEEEEE
T ss_pred CCCCCCEEEEEEEEEE--CCEEEEEECCCCEEEEEHHHHHC--CCC-CCHHHHHCCCCEEEEEEEEEE
T ss_conf 5999999999999997--86799996899467744332302--323-583364235757999999998
No 62
>d1vqod1 d.77.1.1 (D:10-174) Ribosomal protein L5 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=21.60 E-value=15 Score=12.24 Aligned_cols=10 Identities=20% Similarity=0.218 Sum_probs=5.1
Q ss_pred CCCCEEEEEE
Q ss_conf 2377569999
Q gi|254780386|r 406 RNGFPAEVLF 415 (440)
Q Consensus 406 ~~Gm~~~~~I 415 (440)
..||.+++..
T Consensus 116 i~Gm~Itivt 125 (165)
T d1vqod1 116 IYGLDVTVNL 125 (165)
T ss_dssp ---CEEEEEE
T ss_pred CCCCEEEEEE
T ss_conf 5143599995
No 63
>d1nz9a_ b.34.5.4 (A:) N-utilization substance G protein NusG, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=21.36 E-value=15 Score=12.21 Aligned_cols=27 Identities=19% Similarity=0.286 Sum_probs=19.6
Q ss_pred HCCCCCCEEEEEEECCCCCCCEEEEEEEEEEC
Q ss_conf 01589831799981288754439999999713
Q gi|254780386|r 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372 (440)
Q Consensus 341 ~i~~Gq~v~i~~~a~~~~~~~~~~G~V~~Is~ 372 (440)
..++|+.|+|.- =| |..|.|+|..|.+
T Consensus 4 ~F~~Gd~V~I~~--Gp---F~g~~g~V~~i~~ 30 (58)
T d1nz9a_ 4 AFREGDQVRVVS--GP---FADFTGTVTEINP 30 (58)
T ss_dssp SCCTTCEEEECS--GG---GTTCEEEEEEEET
T ss_pred CCCCCCEEEEEC--CC---CCCCEEEEEEECC
T ss_conf 206999999900--58---9998899999928
No 64
>d1kl9a2 b.40.4.5 (A:3-88) Eukaryotic initiation factor 2alpha, eIF2alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.33 E-value=15 Score=12.20 Aligned_cols=34 Identities=6% Similarity=0.121 Sum_probs=15.0
Q ss_pred CEEEEECCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHH
Q ss_conf 1168731212012221244455421033556504775326223110
Q gi|254780386|r 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341 (440)
Q Consensus 296 ~~G~V~~l~~~~~G~~v~~G~~l~~Ivp~~~~l~v~~~v~~~di~~ 341 (440)
+.|+|..+. .-|-+|. |. ..+. ++++||..+++.
T Consensus 17 v~G~V~~i~--~~G~fV~-------l~-~~~~--i~G~i~~sels~ 50 (86)
T d1kl9a2 17 VMVNVRSIA--EMGAYVS-------LL-EYNN--IEGMILLSELSR 50 (86)
T ss_dssp EEEEEEEEC--SSEEEEE-------ET-TTTT--EEEEEEGGGC--
T ss_pred EEEEEEEEE--CCEEEEE-------EE-CCCC--EEEEEEEEECCC
T ss_conf 999999995--8858999-------83-3799--899998511054
No 65
>d1tova_ b.34.10.1 (A:) Cytoskeleton-associated protein F53F4.3 {Caenorhabditis elegans [TaxId: 6239]}
Probab=20.59 E-value=16 Score=12.10 Aligned_cols=48 Identities=8% Similarity=0.037 Sum_probs=30.2
Q ss_pred HHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECHH
Q ss_conf 2231101589831799981288754439999999713344467776551189999993501
Q gi|254780386|r 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396 (440)
Q Consensus 336 ~~di~~i~~Gq~v~i~~~a~~~~~~~~~~G~V~~Is~~~~~~~~~~~~~~~y~v~i~~~~~ 396 (440)
+.....+++|+.|.|... . ...-.|+|.+|.+..... +. -|=|+++++
T Consensus 9 ~~~~~~l~VG~RV~V~~~---~--~~~~~G~vryiG~~~~~~------g~--~vGVelD~p 56 (98)
T d1tova_ 9 EEAAKNIMVGNRCEVTVG---A--QMARRGEVAYVGATKFKE------GV--WVGVKYDEP 56 (98)
T ss_dssp HHHHTTCCTTCEEEECCT---T--SCCEEEEEEEEECCSSSS------SC--EEEEEESSS
T ss_pred HHHCCCCCCCCEEEEECC---C--CCCEEEEEEEEEECCCCC------CE--EEEEEECCC
T ss_conf 530458843999999569---9--873569999961468999------63--999995788
No 66
>d1mjia_ d.77.1.1 (A:) Ribosomal protein L5 {Thermus thermophilus [TaxId: 274]}
Probab=20.51 E-value=16 Score=12.09 Aligned_cols=14 Identities=21% Similarity=0.422 Sum_probs=8.0
Q ss_pred HCCCCCCEEEEEEE
Q ss_conf 01589831799981
Q gi|254780386|r 341 HVKKGYTATVRFPH 354 (440)
Q Consensus 341 ~i~~Gq~v~i~~~a 354 (440)
+++.|+++-.+++-
T Consensus 79 klRkg~piG~kvTL 92 (180)
T d1mjia_ 79 KLRKGMPIGLRVTL 92 (180)
T ss_dssp SSSCCSEEEEEEEE
T ss_pred EEECCCCEEEEEEE
T ss_conf 43049822589863
Done!