RPSBLAST alignment for GI: 254780386 and conserved domain: COG1566
>gnl|CDD|31754 COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]. Length = 352
Score = 50.7 bits (121), Expect = 8e-07
Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 17/190 (8%)
Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
LRA L+S Q + + A QN+L ++ + + + E + +
Sbjct: 110 LRAQLASAQALIAQAEAQDLDQA--QNELERRAELAQRGVVSREELDRARAALQAA---- 163
Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEM--SKLTILEKTR---EQKTILSPIAGTIVY 302
EA L A ++ + L +++ + A S L++ + E+ I +P+ G +
Sbjct: 164 --EAALAAAQAAQKQNLALLESEVSGAQAQVASAEAALDQAKLDLERTVIRAPVDGYVT- 220
Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
N S Y PLM +VP Y+ A Q+ V+ G A + A
Sbjct: 221 NLSVRVGQYVSAGTPLMALVPLDSF-YVVANFKETQLARVRPGQPAEITL--DAYPGNGV 277
Query: 363 FKAIIEKIDP 372
+ I+E I P
Sbjct: 278 VEGIVEGIAP 287