HHsearch alignment for GI: 254780387 and conserved domain: COG1823
>COG1823 Predicted Na+/dicarboxylate symporter [General function prediction only].
Probab=100.00 E-value=0 Score=506.45 Aligned_cols=407 Identities=20% Similarity=0.351 Sum_probs=353.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 999999999999999999995-----------778999876669999999999999999999999613430246777999
Q gi|254780387|r 17 KILYIQVLVAIFSGMALGHFV-----------PQIGVQMQPLGDIFVKTTKMLITPVIFLTVSTGIARMKDMKVIGQIFW 85 (426)
Q Consensus 17 ~~L~~~ilig~v~Gi~~G~~~-----------~~~~~~l~~~G~lfi~lLkm~viPLVf~sIi~gIa~l~~~~~~gki~~ 85 (426)
T Consensus 28 ~slskrV~~aL~lG~vfG~~Lq~~~g~~~~~~~~t~~W~nivgnGYV~LLqMivmPLVfiSIlsAi~kl~~~~~lgKis~ 107 (458)
T COG1823 28 ISLSKRVLIALVLGVVFGLALQYIYGTDSPVLKETIDWFNIVGNGYVRLLQMIVMPLVFISILSAIAKLDNASKLGKISL 107 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 77999999999999999999999966996577767789998503999999999999999999999999871344114689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCHHHH-HHHHH-HCCCCCCCCCHHHHHHHHHHCCHHHHHHHC---CC
Q ss_conf 9999999999999999999987730246-878543442-11111-001333443089999988520547863215---70
Q gi|254780387|r 86 KAMFLFFVFSMFALVIGLIVGNIAKPGI-GMNVDLKSL-NTESI-AHIKSSHAKSFIGFMQDMIPDTALSALTSG---NI 159 (426)
Q Consensus 86 kti~~~l~tt~iA~~igl~~~~~~~PG~-g~~~~~~~~-~~~~~-~~~~~~~~~~~~~~l~~liP~Nif~a~a~g---ni 159 (426)
T Consensus 108 l~i~~ll~ttaIAA~iGi~~~~~fgLtA~~l~~G~~e~a~~~~i~~~~~~~~~~tipq~ilslIP~NpF~dlTGa~~tSi 187 (458)
T COG1823 108 LTIGTLLFTTAIAALIGILVALLFGLTAEGLVQGDAETARISEIQTYVGKVADLTIPQLILSLIPKNPFADLTGANPTSI 187 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHCCCCCCE
T ss_conf 99999999999999999999998167689886273888889999988736664113799998658992367636896665
Q ss_pred HHHHHHHHHHHHHHHCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 5799999999999521564----302489899999999999999865453337889999998510740024689999999
Q gi|254780387|r 160 LQTLIVALLFGISLSLVGE----KSDTIRKCLEEINFPVFRMVSIVMRIAPLGAFGAMSFTIGKYGLSSISNLIFLVFCL 235 (426)
Q Consensus 160 L~iivfai~~GiA~~~~~~----k~~~l~~~~~~~~~v~~kii~~vi~laPigvf~lia~~~a~~g~~~l~~l~~~v~~~ 235 (426)
T Consensus 188 IaVVIFa~~lGiAalk~~k~~~~~ge~~~~~I~t~~~ivM~lV~~VirLTPYgV~AlMtkv~ats~~~~I~~Lg~FivAs 267 (458)
T COG1823 188 IAVVIFAAFLGIAALKLSKKDPEKGERFKAAIDTLQSIVMKLVRLVIRLTPYGVLALMTKVVATSNLEDIIKLGSFIVAS 267 (458)
T ss_pred EEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 63059999999999986001667676999999999999999999999716199999999998525699999987699999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH-HHCCCCHHHHHHHHHHHHHHCCCCH
Q ss_conf 999988779999999963286603443200014677764214310079999999-8448997584467677775337521
Q gi|254780387|r 236 YATSAFFILGVLGILARFCRFSIIKLIIFLKEEVLLVLSTSSSESALPGLMKKM-EEAGCHRSIVSMVVPTGYSFNLDGS 314 (426)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~Af~T~SS~AtlP~~l~~~-e~~gv~~~i~~fviPlG~tinm~G~ 314 (426)
T Consensus 268 Y~A-i~~MFvvH~iLL~~~g~NPi~Y~Kkv~PvL~FAFtSRSSAatiPlnietQt~klGV~~~IANfaASFG~tiGQNGC 346 (458)
T COG1823 268 YIA-IFIMFVVHGILLALNGVNPIKYFKKVWPVLTFAFTSRSSAATIPLNIETQTRKLGVPEGIANFAASFGATIGQNGC 346 (458)
T ss_pred HHH-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 999-9999999999999808878999998867876310334533557742799887629918888889874420256771
Q ss_pred H-HHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 5-8999999999985098-7998999999999999962136843258999999998615998999999997777643567
Q gi|254780387|r 315 N-IYITLATLFISQATNV-PLSLTDQLSLLLIAMVSSKGAAGVTGSAFITLAATITLVPSLPIAGMTLILGVDRFMSECR 392 (426)
Q Consensus 315 a-~~~~~~~iFia~~~gi-~l~~~~~~~~~~~~~i~s~g~agvPg~~~v~~~~~~~~~~glP~~~i~ll~~id~~~D~~r 392 (426)
T Consensus 347 AGiyPAmlAvMVAPtvgi~p~d~~fi~tli~vv~IsS~GvAGVGGGATfAAliVLs~-l~lPv~lvgLlIsIEPlIDMgR 425 (458)
T COG1823 347 AGIYPAMLAVMVAPTVGINPLDPHFIATLIGVVTISSFGVAGVGGGATFAALIVLSA-LGLPVALVGLLISIEPLIDMGR 425 (458)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHH
T ss_conf 243199999986433588988889999999999985133166784288999999972-6973999989985126776526
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
Q ss_conf 899876779999999988251048988876378
Q gi|254780387|r 393 SVTNFIGNAVMTVVVSRWEKKLDPKLFNKYIGI 425 (426)
Q Consensus 393 T~~NV~gd~~~a~iv~~~~~~~d~~~~~~~~~~ 425 (426)
T Consensus 426 TAlNV~GSM~aG~iT~k~lk~~d~~~~~~~~~~ 458 (458)
T COG1823 426 TALNVSGSMTAGTITSKLLKQTDKEIYNSEDDA 458 (458)
T ss_pred HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 763665415787888999886143444332359