HHsearch results for GI: 254780387 and protein with PDBid: 2nwl_A
>2nwl_A GLTPH, glutamate symport protein; alpha helical, membrane protein, helical hairpin, unwound region, transport protein; HET: PLM; 2.96A {Pyrococcus horikoshii} PDB: 2nww_A* 1xfh_A* 2nwx_A* 3kbc_A
Probab=100.00 E-value=0 Score=665.51 Aligned_cols=400 Identities=27% Similarity=0.525 Sum_probs=371.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 026358999999999999999999999577------89998766699999999999999999999996134302467779
Q gi|254780387|r 10 DIRPPLYKILYIQVLVAIFSGMALGHFVPQ------IGVQMQPLGDIFVKTTKMLITPVIFLTVSTGIARMKDMKVIGQI 83 (426)
Q Consensus 10 ~~~~~~~~~L~~~ilig~v~Gi~~G~~~~~------~~~~l~~~G~lfi~lLkm~viPLVf~sIi~gIa~l~~~~~~gki 83 (426)
+.||....++..|+++|+++|+++|.++++ ...|++++||+|+|++||+++|+||+|++.|++++++ ++.||+
T Consensus 3 ~~~k~~~~~l~~~ilia~v~Gi~~G~~~~~~~~~~~~~~~l~~~G~lFi~lLkm~vvPlI~~sii~~i~~l~~-~~~gri 81 (422)
T 2nwl_A 3 LYRKYIEYPVLIKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISP-ARLGRV 81 (422)
T ss_dssp -------CCCTTHHHHHHHHHHHHHHHHHHTTTHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT-TTHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHCCCH
T ss_conf 8887522779999999999999999996542212789999999999999999999999999999999975340-100107
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHH
Q ss_conf 99999999999999999999998773024687854344211111001333443089999988520547863215705799
Q gi|254780387|r 84 FWKAMFLFFVFSMFALVIGLIVGNIAKPGIGMNVDLKSLNTESIAHIKSSHAKSFIGFMQDMIPDTALSALTSGNILQTL 163 (426)
Q Consensus 84 ~~kti~~~l~tt~iA~~igl~~~~~~~PG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~liP~Nif~a~a~gniL~ii 163 (426)
+.|++.||+.++.+|+.+|+.++++++||.+.+.+... +..+..+.+++.|++.+++|+|+|+++++||++|++
T Consensus 82 ~~k~i~~~~~tt~~a~~lgl~~~~~~~pg~~~~~~~~~------~~~~~~~~~~~~~~~~~~ip~Ni~~a~~~~~~l~vi 155 (422)
T 2nwl_A 82 GVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGG------QQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTI 155 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCCCCCC------CCC-----CCTHHHHGGGSCSCHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH------HHCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCHHH
T ss_conf 99999999999999999999999843877540012104------430553477499999983889779996458863036
Q ss_pred HHHHHHHHHHHCCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 99999999952156--------4302489899999999999999865453337889999998510740024689999999
Q gi|254780387|r 164 IVALLFGISLSLVG--------EKSDTIRKCLEEINFPVFRMVSIVMRIAPLGAFGAMSFTIGKYGLSSISNLIFLVFCL 235 (426)
Q Consensus 164 vfai~~GiA~~~~~--------~k~~~l~~~~~~~~~v~~kii~~vi~laPigvf~lia~~~a~~g~~~l~~l~~~v~~~ 235 (426)
+||+++|+|+.+.+ |+.+++.+++++++++++|+++|+|+++|+|+|+++|++.+++|.+.+.++++++.++
T Consensus 156 ~fai~~Gia~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~iv~~i~~l~Pigvf~l~a~~~~~~g~~~l~~l~~~~~~~ 235 (422)
T 2nwl_A 156 FFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAV 235 (422)
T ss_dssp HHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHTTTGGGCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 89888899999840100366678889999999999999999999999886999999999987302346788899999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHH
Q ss_conf 99998877999999996328660344320001467776421431007999999984489975844676777753375215
Q gi|254780387|r 236 YATSAFFILGVLGILARFCRFSIIKLIIFLKEEVLLVLSTSSSESALPGLMKKMEEAGCHRSIVSMVVPTGYSFNLDGSN 315 (426)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~Af~T~SS~AtlP~~l~~~e~~gv~~~i~~fviPlG~tinm~G~a 315 (426)
++++.++.++.++++.+++|+||++++|+++|++++||+|+||+||+|+++||+||+|+||++++|++|+|+|+||||+|
T Consensus 236 ~~~~~l~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~Af~T~SS~atlP~~l~~~~~~gv~~~i~~fvlPlg~t~n~~G~a 315 (422)
T 2nwl_A 236 YVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTA 315 (422)
T ss_dssp HHHHHHHHHHTHHHHHHHTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTSCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHCCEECCCHHHCCCCCHH
T ss_conf 99999999999999999958888988989999999999715632145799999998597833345315631102688458
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCH------HHHHHHHHHHHHHH
Q ss_conf 899999999998509879989999999999999621368432589999999986159989------99999997777643
Q gi|254780387|r 316 IYITLATLFISQATNVPLSLTDQLSLLLIAMVSSKGAAGVTGSAFITLAATITLVPSLPI------AGMTLILGVDRFMS 389 (426)
Q Consensus 316 ~~~~~~~iFia~~~gi~l~~~~~~~~~~~~~i~s~g~agvPg~~~v~~~~~~~~~~glP~------~~i~ll~~id~~~D 389 (426)
+|++++++|++|.||+++++++++.++++++++|+|+||+||++++.+..++... |+|. +++++++++||++|
T Consensus 316 l~~~~~~if~a~~~g~~lt~~~~~~~~~~~~l~s~g~~gvPg~~~v~~~~vl~~~-glP~~~~~~~~~i~liiaid~l~D 394 (422)
T 2nwl_A 316 LYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSV-GLPLTDPNVAAAYAMILGIDAILD 394 (422)
T ss_dssp HHHHHHHHHHHHHHTCCCCSSCCHHHHHHHHHHHHHSCSSSSHHHHHHHHHHHHH-TCCTTSTTHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 9999999999999489999899999999999999844786167999999999984-998764115668999997986606
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 5678998767799999999882510489
Q gi|254780387|r 390 ECRSVTNFIGNAVMTVVVSRWEKKLDPK 417 (426)
Q Consensus 390 ~~rT~~NV~gd~~~a~iv~~~~~~~d~~ 417 (426)
|+||++||+||++++++++|+||++|+.
T Consensus 395 ~~rT~~NV~gd~~~a~iv~k~~g~ld~~ 422 (422)
T 2nwl_A 395 MGRTMVNVTGDLTGTAIVAKTEGTLVPR 422 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 6189994987899999999973888899