HHsearch alignment for GI: 254780388 and conserved domain: COG4548
>COG4548 NorD Nitric oxide reductase activation protein [Inorganic ion transport and metabolism].
Probab=97.05 E-value=0.011 Score=35.60 Aligned_cols=107 Identities=15% Similarity=0.188 Sum_probs=78.4
Q ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC--------CHHHHHHHHHH
Q ss_conf 6665641256777776458899999862366665444456677750699999606688885--------40899999999
Q gi|254780388|r 323 IVKTFAIDENEMGSTAINDAMQTAYDTIISSNEDEVHRMKNNLEAKKYIVLLTDGENTQDN--------EEGIAICNKAK 394 (458)
Q Consensus 323 ~~~~~i~~~~~~g~T~~~~gl~~g~~~Ls~~~~~~~~~~~~~~~~~K~iil~TDG~n~~~~--------~~~~~~C~~~K 394 (458)
T Consensus 519 ~~~~RImALePg~ytR~G~AIR~As~kL~~-----------rpq~qklLivlSDGkPnd~d~YEgr~gIeDTr~AV~eaR 587 (637)
T COG4548 519 TVGPRIMALEPGYYTRDGAAIRHASAKLME-----------RPQRQKLLIVLSDGKPNDFDHYEGRFGIEDTREAVIEAR 587 (637)
T ss_pred CCCHHHEECCCCCCCCCCHHHHHHHHHHHC-----------CCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 533122133766444310999999999834-----------741124899944898543443233211153799999998
Q ss_pred HCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHH
Q ss_conf 8796899999437887431178999860689837882998999999999987
Q gi|254780388|r 395 SQGIRIMTIAFSVNKTQQEKARYFLSNCASPNSFFEANSTHELNKIFRDRIG 446 (458)
Q Consensus 395 ~~gI~IytI~f~~~~~~~~~~~~~lk~CAs~~~yy~a~~~~eL~~aF~~~i~ 446 (458)
T Consensus 588 k~Gi~VF~Vtld~------ea~~y~p~~fgqngYa~V~~v~~LP~~L~~lyr 633 (637)
T COG4548 588 KSGIEVFNVTLDR------EAISYLPALFGQNGYAFVERVAQLPGALPPLYR 633 (637)
T ss_pred HCCCEEEEEEECC------HHHHHHHHHHCCCCEEECCCHHHCCHHHHHHHH
T ss_conf 6583479998333------055552888526746970240016055799999