HHsearch alignment for GI: 254780388 and conserved domain: PRK13685
>PRK13685 hypothetical protein; Provisional.
Probab=99.79 E-value=1.9e-17 Score=129.87 Aligned_cols=170 Identities=19% Similarity=0.178 Sum_probs=125.8
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 43306677766522112346775666520121100677665565576812100566665641256777776458899999
Q gi|254780388|r 268 IKKKHLVRDALASVIRSIKKIDNVNDTVRMGATFFNDRVISDPSFSWGVHKLIRTIVKTFAIDENEMGSTAINDAMQTAY 347 (458)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~T~~~~gl~~g~ 347 (458)
T Consensus 108 p~Rl~~ak~~~~~fi~~~~------~~driGlv~Fa~~a~~~~plT~D~-----~~~~~~l~~l~~~~~taiG~ai~~Al 176 (326)
T PRK13685 108 PNRLAAAQEAAKQFADQLT------PGINLGLIAFAGTATVLVSPTTNR-----EATKNALDKLQLADRTATGEGIFTAL 176 (326)
T ss_pred CCHHHHHHHHHHHHHHHCC------CCCEEEEEEECCCCEECCCCCCCH-----HHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 5689999999999997379------888289999658720148987539-----99999998468788886406899999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCH-----HHHHHHHHHHCCCEEEEEEECCCCCCC---------C
Q ss_conf 86236666544445667775069999960668888540-----899999999879689999943788743---------1
Q gi|254780388|r 348 DTIISSNEDEVHRMKNNLEAKKYIVLLTDGENTQDNEE-----GIAICNKAKSQGIRIMTIAFSVNKTQQ---------E 413 (458)
Q Consensus 348 ~~Ls~~~~~~~~~~~~~~~~~K~iil~TDG~n~~~~~~-----~~~~C~~~K~~gI~IytI~f~~~~~~~---------~ 413 (458)
T Consensus 177 ~~l~~~~~~~---~~~~~~~~~~IILLTDG~~n~g~~~~~p~~~~~AA~~A~~~gi~IyTIgvGt~~g~~~~~g~~~~~~ 253 (326)
T PRK13685 177 QAIATVGAVI---GGGDTPPPARIVLFSDGKETVPTNPDNPKGAYTAARTAKDQGVPISTISFGTPYGFVEINGQRQPVP 253 (326)
T ss_pred HHHHHHHHHC---CCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 9998633201---4567778867999748997778898873029999999998599489999779988435478403456
Q ss_pred HHHHHHHHHC--CCCCEEEECCHHHHHHHHHHHHHHHHHHH
Q ss_conf 1789998606--89837882998999999999987587535
Q gi|254780388|r 414 KARYFLSNCA--SPNSFFEANSTHELNKIFRDRIGNEIFER 452 (458)
Q Consensus 414 ~~~~~lk~CA--s~~~yy~a~~~~eL~~aF~~~i~~~~~~~ 452 (458)
T Consensus 254 lDe~~L~~IA~~TGG~yfrA~d~~~L~~Iy~~-i~~~i~~~ 293 (326)
T PRK13685 254 VDDETLKKIAQLSGGEFYTAASLEELRAVYAT-LQQQIGYE 293 (326)
T ss_pred CCHHHHHHHHHHCCCEEEECCCHHHHHHHHHH-HHHHHCCE
T ss_conf 89999999999729879971999999999999-63331603