HHsearch alignment for GI: 254780388 and conserved domain: cd01466

>cd01466 vWA_C3HC4_type VWA C3HC4-type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most,
Probab=99.59  E-value=5.7e-14  Score=107.62  Aligned_cols=136  Identities=20%  Similarity=0.221  Sum_probs=97.8

Q ss_pred             CHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             06677766522112346775666520121100677665565576812100566665641256777776458899999862
Q gi|254780388|r  271 KHLVRDALASVIRSIKKIDNVNDTVRMGATFFNDRVISDPSFSWGVHKLIRTIVKTFAIDENEMGSTAINDAMQTAYDTI  350 (458)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~T~~~~gl~~g~~~L  350 (458)
T Consensus        18 l~~~k~a~~~~~~~L~------~~d~v~iV~F~~~a~~~~pl~~~~-~~~~~~~~~~i~~l~~~GgT~i~~gl~~a~~~l   90 (155)
T cd01466          18 LQLVKHALRFVISSLG------DADRLSIVTFSTSAKRLSPLRRMT-AKGKRSAKRVVDGLQAGGGTNVVGGLKKALKVL   90 (155)
T ss_pred             HHHHHHHHHHHHHHCC------CCCEEEEEEECCCCEEEECCEECC-HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf             9999999999998489------767489999568742620460379-999999999875377688872679999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHC--CCCCE
Q ss_conf             3666654444566777506999996066888854089999999987968999994378874311789998606--89837
Q gi|254780388|r  351 ISSNEDEVHRMKNNLEAKKYIVLLTDGENTQDNEEGIAICNKAKSQGIRIMTIAFSVNKTQQEKARYFLSNCA--SPNSF  428 (458)
Q Consensus       351 s~~~~~~~~~~~~~~~~~K~iil~TDG~n~~~~~~~~~~C~~~K~~gI~IytI~f~~~~~~~~~~~~~lk~CA--s~~~y  428 (458)
T Consensus        91 ~~~~---------~~~~~~~IiLlTDG~~n~~-----~~~~~~~~~~i~i~tiGiG~~~-----d~~lL~~iA~~~gG~~  151 (155)
T cd01466          91 GDRR---------QKNPVASIMLLSDGQDNHG-----AVVLRADNAPIPIHTFGLGASH-----DPALLAFIAEITGGTF  151 (155)
T ss_pred             HHCC---------CCCCCEEEEEECCCCCCHH-----HHHHHHHCCCCEEEEEEECCCC-----CHHHHHHHHHCCCCEE
T ss_conf             8436---------6898308999826986405-----7789987179739999978867-----8999999997699779


Q ss_pred             EEEC
Q ss_conf             8829
Q gi|254780388|r  429 FEAN  432 (458)
Q Consensus       429 y~a~  432 (458)
T Consensus       152 ~~v~  155 (155)
T cd01466         152 SYVK  155 (155)
T ss_pred             EEEC
T ss_conf             9949