HHsearch alignment for GI: 254780388 and conserved domain: cd01477
>cd01477 vWA_F09G8-8_type VWA F09G8.8 type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of mo
Probab=99.02 E-value=3.3e-08 Score=70.77 Aligned_cols=132 Identities=17% Similarity=0.225 Sum_probs=90.4
Q ss_pred CCCCCCEEEEEEECCCCCCCCCCCCCHHHHH-HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 5666520121100677665565576812100-566665641256777776458899999862366665444456677750
Q gi|254780388|r 290 NVNDTVRMGATFFNDRVISDPSFSWGVHKLI-RTIVKTFAIDENEMGSTAINDAMQTAYDTIISSNEDEVHRMKNNLEAK 368 (458)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~g~T~~~~gl~~g~~~Ls~~~~~~~~~~~~~~~~~ 368 (458)
T Consensus 59 ~~pr~TRVGlVTYn~~AtvvAdLn~~~S~ddl~~~i~~~l~~vsss~~SyL~~GL~aA~~~l~~~~~------~~R~nyk 132 (193)
T cd01477 59 DDPRSTRVGLVTYNSNATVVADLNDLQSFDDLYSQIQGSLTDVSSTNASYLDTGLQAAEQMLAAGKR------TSRENYK 132 (193)
T ss_pred CCCCCEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC------CCCCCCC
T ss_conf 9987338999996787459863454565788999998875146666312799999999999983326------6424862
Q ss_pred EEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEE
Q ss_conf 6999996066888854089999999987968999994378874311789998606898378
Q gi|254780388|r 369 KYIVLLTDGENTQDNEEGIAICNKAKSQGIRIMTIAFSVNKTQQEKARYFLSNCASPNSFF 429 (458)
Q Consensus 369 K~iil~TDG~n~~~~~~~~~~C~~~K~~gI~IytI~f~~~~~~~~~~~~~lk~CAs~~~yy 429 (458)
T Consensus 133 KVVIVyAs~y~~~g~~dp~pvA~rLK~~Gv~IiTVa~~q~~~~--~~~~~L~~IASpg~nF 191 (193)
T cd01477 133 KVVIVFASDYNDEGSNDPRPIAARLKSTGIAIITVAFTQDESS--NLLDKLGKIASPGMNF 191 (193)
T ss_pred EEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCH--HHHHHHHHHCCCCCCC
T ss_conf 7999995024678988869999999876978999982688758--8999888757998887