HHsearch results for GI: 254780388 and protein with PDBid: 1rrk_A
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.48 E-value=8.2e-13 Score=98.81 Aligned_cols=167 Identities=13% Similarity=0.103 Sum_probs=107.1
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC-----CCCCCCCCHHHHHHHH
Q ss_conf 67776652211234677566652012110067766556557681210056666564125-----6777776458899999
Q gi|254780388|r 273 LVRDALASVIRSIKKIDNVNDTVRMGATFFNDRVISDPSFSWGVHKLIRTIVKTFAIDE-----NEMGSTAINDAMQTAY 347 (458)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~~~g~T~~~~gl~~g~ 347 (458)
..+..+..++...... ....+.+...|+.......++.... ..++..+...+..+ ...|+|+...+|.++.
T Consensus 21 ~~k~~~~~~i~~~~~~---~~~~rv~lv~f~~~~~~~~~l~~~~-~~~~~~~~~~i~~i~~~~~~~~g~T~~~~al~~a~ 96 (497)
T 1rrk_A 21 GAKKVLVNLIEKVASY---GVKPRYGLVTYATYPKIWVKVSEAD-SSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVY 96 (497)
T ss_dssp HHHHHHHHHHHHHHHT---TCCCEEEEEEESSSEEEEECTTSGG-GGCHHHHHHHHHHCCGGGSCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCC---CCCEEEEEEEECCEEEEEECCCCCC-CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 9999999999853658---9960999999878178997379877-56899999999608566886888757999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH-------------HHHCCCEEEEEEECCCCCCCCH
Q ss_conf 862366665444456677750699999606688885408999999-------------9987968999994378874311
Q gi|254780388|r 348 DTIISSNEDEVHRMKNNLEAKKYIVLLTDGENTQDNEEGIAICNK-------------AKSQGIRIMTIAFSVNKTQQEK 414 (458)
Q Consensus 348 ~~Ls~~~~~~~~~~~~~~~~~K~iil~TDG~n~~~~~~~~~~C~~-------------~K~~gI~IytI~f~~~~~~~~~ 414 (458)
..+........ ......+|++||+|||..+.+.... ..-+. +|++||+||+||++.+.
T Consensus 97 ~~~~~~~~~~~---~~~~~~~~viillTDG~~n~~~~p~-~~~~~i~~~~~~~~~~~~~~~~gi~i~~vgiG~~~----- 167 (497)
T 1rrk_A 97 SMMSWPDDVPP---EGWNRTRHVIILMTDGLHNMGGDPI-TVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLV----- 167 (497)
T ss_dssp HHHCCC---------CGGGCEEEEEEEECSCCCSSSCTH-HHHHHHHHHTTCSSCC-CCCGGGEEEEEEECSSSC-----
T ss_pred HHHHHHHCCCC---CCCCCCCEEEEEEECCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC-----
T ss_conf 99865201475---5556787599999797677789878-99999998787777776687679079997368867-----
Q ss_pred HHHHHHHHCC-C-C--CEEEECCHHHHHHHHHHHHHHHHHHH
Q ss_conf 7899986068-9-8--37882998999999999987587535
Q gi|254780388|r 415 ARYFLSNCAS-P-N--SFFEANSTHELNKIFRDRIGNEIFER 452 (458)
Q Consensus 415 ~~~~lk~CAs-~-~--~yy~a~~~~eL~~aF~~~i~~~~~~~ 452 (458)
..+.|+..|| + + |+|.+.+-++|.+.|.+++.+.+...
T Consensus 168 d~~~L~~iAs~~~~~~~~f~~~d~~~L~~~~~~~~~~~~~~~ 209 (497)
T 1rrk_A 168 NQVNINALASKKDNEQHVCKVKDMECLEDVFYQMIDESQSLS 209 (497)
T ss_dssp CHHHHHHHSCCCTTCCCEEETTCHHHHHHHHHHHSCGGGGTT
T ss_pred CHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCC
T ss_conf 999999875178985049994999999998753024660267