HHsearch results for GI: 254780388 and protein with PDBid: 2iue_A
>2iue_A Pactolus I-domain; membrane protein, CD, ITC, limbs, midas, admidas, membrane, integrin, titration, rossman fold, cell adhesion, transmembrane; NMR {Mus musculus}
Probab=98.41 E-value=8.3e-06 Score=54.06 Aligned_cols=149 Identities=11% Similarity=0.141 Sum_probs=79.6
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCC-CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 7776652211234677566652012110067766556-557681210056666564125677777645889999986236
Q gi|254780388|r 274 VRDALASVIRSIKKIDNVNDTVRMGATFFNDRVISDP-SFSWGVHKLIRTIVKTFAIDENEMGSTAINDAMQTAYDTIIS 352 (458)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~g~T~~~~gl~~g~~~Ls~ 352 (458)
++..+..+...+... ....+.+...|.+...... +.+ .+.......+..+.+.|++..++++.-|......
T Consensus 23 ~k~~~~~l~~~l~~~---~~~~r~g~v~f~d~~~~~~~~~t-----~~~~~~~~~i~~~~~~gg~d~~e~~~~al~~a~~ 94 (212)
T 2iue_A 23 VQTLGSDLLKALNEI---SRSGRIGFGSIVNMTFQHILKLT-----ADSSQFQRELRKQLVSGKLATPKGQLDAVVQVAI 94 (212)
T ss_dssp HHHHHHHHHHHHHHH---CSCEEEEEEEESSSCEEEEEEEE-----SCHHHHHHHHHTCCCCCCSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC---CCCEEEEEEECCCCCCCCCCCCC-----CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 999999999999726---98708999970564343346557-----6399999998630214898885069999999998
Q ss_pred C-CCCCCCCCCCCCCCCEEEEEEECCCCCCC------------------------------CCHHHHHHHHHHHCCCEEE
Q ss_conf 6-66544445667775069999960668888------------------------------5408999999998796899
Q gi|254780388|r 353 S-NEDEVHRMKNNLEAKKYIVLLTDGENTQD------------------------------NEEGIAICNKAKSQGIRIM 401 (458)
Q Consensus 353 ~-~~~~~~~~~~~~~~~K~iil~TDG~n~~~------------------------------~~~~~~~C~~~K~~gI~Iy 401 (458)
. +.. ..+...|++|++|||..+.. ......++..+++++|.++
T Consensus 95 ~~~~~------~~~~~~~~ivl~tD~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~i 168 (212)
T 2iue_A 95 CLGEI------GWRNGTRFLVLVTDNDFHLAKDKTLGTRQNTSDGRCHLDDGMYRSRGEPDYQSVVQLASKLAENNIQPI 168 (212)
T ss_dssp CHHHH------TCCSSEEEEEEECSSCBCCTTGGGGGTCCSCCCSSCCBSSSBBGGGGSSCCCCHHHHHHHHHHHTCEEE
T ss_pred HHHHC------CCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEE
T ss_conf 76643------777773599999689865566302444531158715752565356777677779999999986397589
Q ss_pred EEEECCCCCCCCHHHHHHHHHC--CCCCEEEE--CCHHHHHHHHHH
Q ss_conf 9994378874311789998606--89837882--998999999999
Q gi|254780388|r 402 TIAFSVNKTQQEKARYFLSNCA--SPNSFFEA--NSTHELNKIFRD 443 (458)
Q Consensus 402 tI~f~~~~~~~~~~~~~lk~CA--s~~~yy~a--~~~~eL~~aF~~ 443 (458)
..-- ....+.+++-+ .++.++.. ...+.+.+..++
T Consensus 169 ~~~~-------~~~~~~~~~l~~~~~g~~v~~ls~dssni~~~I~~ 207 (212)
T 2iue_A 169 FVVP-------SRMVKTYEKLTTFIPKLTIGELSDDSSNVAQLIRN 207 (212)
T ss_dssp EEEE-------HHHHHHHHHHHHHSTTCEEEEESSCCHHHHHHHHH
T ss_pred EEEC-------CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9974-------53278999999973874126665543879999999