HHsearch results for GI: 254780388 and protein with PDBid: 3k6s_A

>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=98.53  E-value=4.3e-07  Score=62.30  Aligned_cols=162  Identities=15%  Similarity=0.204  Sum_probs=101.6

Q ss_pred             CHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHH
Q ss_conf             066777665221123467756665201211006776655655768121005666656412-5677777645889999986
Q gi|254780388|r  271 KHLVRDALASVIRSIKKIDNVNDTVRMGATFFNDRVISDPSFSWGVHKLIRTIVKTFAID-ENEMGSTAINDAMQTAYDT  349 (458)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~g~T~~~~gl~~g~~~  349 (458)
                      ....+..+..++...+   +.  ....+...|+......-.+..  ......... .+.. -+..|.|+...||......
T Consensus       148 f~~~k~f~~~v~~~f~---~~--~~qvg~vqys~~~~~~f~l~d--~~~~~~~~~-~v~~i~~~~g~T~Ta~ai~~~~~~  219 (1095)
T 3k6s_A          148 FATMMNFVRAVISQFQ---RP--STQFSLMQFSNKFQTHFTFEE--FRRSSNPLS-LLASVHQLQGFTYTATAIQNVVHR  219 (1095)
T ss_dssp             HHHHHHHHHHHHHSSC---SS--SEEEEEEEESSSEEEEECSHH--HHSCSCGGG-GTTTCCCCCSCBCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHCC---CC--CEEEEEEEECCCEEEEEEHHH--CCCCCCHHH-HHHHEEECCCCCCHHHHHHHHHHH
T ss_conf             6899999999986246---67--549999961373258887034--333302678-754146136743078889999997


Q ss_pred             HCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCC-C--C
Q ss_conf             236666544445667775069999960668888540899999999879689999943788743117899986068-9--8
Q gi|254780388|r  350 IISSNEDEVHRMKNNLEAKKYIVLLTDGENTQDNEEGIAICNKAKSQGIRIMTIAFSVNKTQQEKARYFLSNCAS-P--N  426 (458)
Q Consensus       350 Ls~~~~~~~~~~~~~~~~~K~iil~TDG~n~~~~~~~~~~C~~~K~~gI~IytI~f~~~~~~~~~~~~~lk~CAs-~--~  426 (458)
                      +.....+.      .++..|+||++|||+-+.+.......-+.++.+||.+|.||.+........ ..-|+..|| |  .
T Consensus       220 ~f~~~~g~------r~~a~kv~IviTDG~s~~d~~~l~~~i~~~~~~gI~~~aIGvg~~~~~~~~-~~eL~~iAs~p~~~  292 (1095)
T 3k6s_A          220 LFHASYGA------RRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNS-WKELNDIASKPSQE  292 (1095)
T ss_dssp             TTSTTTTC------CSSSEEEEEEEESSCCBSCSSCHHHHHHHHHHHCEEECCEEBSSGGGSTTS-SHHHHTTSCSSTTT
T ss_pred             HHHHHHCC------CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCC-HHHHHHHHCCCCCC
T ss_conf             63164268------889841799992686456732034444458648928999972543256433-53542120588740


Q ss_pred             CEEEECCHHHHHHHHHHHHHH
Q ss_conf             378829989999999999875
Q gi|254780388|r  427 SFFEANSTHELNKIFRDRIGN  447 (458)
Q Consensus       427 ~yy~a~~~~eL~~aF~~~i~~  447 (458)
                      ++|.+++-.+|.+.+.++-.+
T Consensus       293 ~~f~v~~~~aL~~i~~~L~~~  313 (1095)
T 3k6s_A          293 HIFKVEDFDALKDIQNQLKEK  313 (1095)
T ss_dssp             SCCCBSCSGGGGSSTTTHHHH
T ss_pred             EEEEECCHHHHHHHHHHHCCC
T ss_conf             389935557766777764165