HHsearch results for GI: 254780388 and protein with PDBid: 3k6s_B
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=95.63 E-value=0.052 Score=29.81 Aligned_cols=78 Identities=14% Similarity=0.078 Sum_probs=43.8
Q ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHH-HHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC-------------------
Q ss_conf 66665641256777776458899999-8623666654444566777506999996066888-------------------
Q gi|254780388|r 322 TIVKTFAIDENEMGSTAINDAMQTAY-DTIISSNEDEVHRMKNNLEAKKYIVLLTDGENTQ------------------- 381 (458)
Q Consensus 322 ~~~~~~i~~~~~~g~T~~~~gl~~g~-~~Ls~~~~~~~~~~~~~~~~~K~iil~TDG~n~~------------------- 381 (458)
......+.....+|+-+.++|-.-|+ +...-...-.| . +.+|++||.||.....
T Consensus 193 ~~f~~~~~~~~~~~n~d~pe~~~da~~q~~~c~~~igw----r--~~~~~~~~~td~~~h~agdg~l~gi~~pnd~~chl 266 (687)
T 3k6s_B 193 NQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGW----R--NVTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHL 266 (687)
T ss_dssp HHHHHHHHTSCCCCCSSSSCCHHHHHHHHTTCHHHHCC----C--SSCCEEEEECSSCCCCTTGGGGGTCCCCCCSCCCC
T ss_pred HHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCCCC----C--CCEEEEEEECCCCCCCCCCCCCCEECCCCCCCEEE
T ss_conf 99999875167035776865016688887750222364----5--75489999816874426764231040478873170
Q ss_pred -----------CCCHHHHHHHHHHHCCCE-EEEEEE
Q ss_conf -----------854089999999987968-999994
Q gi|254780388|r 382 -----------DNEEGIAICNKAKSQGIR-IMTIAF 405 (458)
Q Consensus 382 -----------~~~~~~~~C~~~K~~gI~-IytI~f 405 (458)
.-.-...+-+++++++|. ||.|.=
T Consensus 267 ~~~~y~~~~~~dyps~~~~~~~~~~~~i~~ifavt~ 302 (687)
T 3k6s_B 267 EDNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTS 302 (687)
T ss_dssp SSSBCSSGGGSCCCCGGGHHHHHHHTTCBCCEEECG
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECC
T ss_conf 488303566667789899999998649259999766