HHSEARCH alignment of GI: 254780388 and SCOP domain: d1atza_

Alignment
>d1atza_ c.62.1.1 (A:) von Willebrand factor A3 domain, vWA3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.28  E-value=8.6e-11  Score=84.39  Aligned_cols=148  Identities=14%  Similarity=0.126  Sum_probs=100.0

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCHHHHHHHHHHHCC
Q ss_conf             77766522112346775666520121100677665565576812100566665641256-77777645889999986236
Q gi|254780388|r  274 VRDALASVIRSIKKIDNVNDTVRMGATFFNDRVISDPSFSWGVHKLIRTIVKTFAIDEN-EMGSTAINDAMQTAYDTIIS  352 (458)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~g~T~~~~gl~~g~~~Ls~  352 (458)
                      .+..+..++......   ....+.+...|+.......++...   .+...+...++.+. .+|.|+...++..+...+..
T Consensus        23 ~k~~v~~~i~~~~i~---~~~~rv~vv~f~~~~~~~~~l~~~---~~~~~l~~~i~~l~~~gg~t~~~~al~~~~~~~~~   96 (184)
T d1atza_          23 MKSFAKAFISKANIG---PRLTQVSVLQYGSITTIDVPWNVV---PEKAHLLSLVDVMQREGGPSQIGDALGFAVRYLTS   96 (184)
T ss_dssp             HHHHHHHHHHHSCBS---TTSEEEEEEEESSSEEEEECTTCC---CCHHHHHHHHHTCCCCCCCCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHCCCC---CCCCEEEEEEEECCCEEECCCCCC---CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf             999999999965879---887589999984221155155456---63999999987301011000102466677887632


Q ss_pred             CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCC---CCEE
Q ss_conf             6665444456677750699999606688885408999999998796899999437887431178999860689---8378
Q gi|254780388|r  353 SNEDEVHRMKNNLEAKKYIVLLTDGENTQDNEEGIAICNKAKSQGIRIMTIAFSVNKTQQEKARYFLSNCASP---NSFF  429 (458)
Q Consensus       353 ~~~~~~~~~~~~~~~~K~iil~TDG~n~~~~~~~~~~C~~~K~~gI~IytI~f~~~~~~~~~~~~~lk~CAs~---~~yy  429 (458)
                      ...+.      .++..|++|++|||..+.   ......+.+|+.||+||+||++...+     ...|+.+||+   .+.|
T Consensus        97 ~~~g~------R~~~~kvvvlltdg~~~d---~~~~~a~~lk~~gi~v~~igiG~~~~-----~~~L~~ias~~~~~~~~  162 (184)
T d1atza_          97 EMHGA------RPGASKAVVILVTDVSVD---SVDAAADAARSNRVTVFPIGIGDRYD-----AAQLRILAGPAGDSNVV  162 (184)
T ss_dssp             CCTTC------CTTSEEEEEEEECSCCSS---CCHHHHHHHHHTTEEEEEEEESSSSC-----HHHHHHHTGGGGGGGCE
T ss_pred             HHCCC------CCCCCEEEEEEEECCCCC---HHHHHHHHHHHCCCEEEEEEECCCCC-----HHHHHHHHCCCCCCCEE
T ss_conf             43178------889815999998067653---06689999997595899999588599-----99999985788856389


Q ss_pred             EECCHHHHHHHH
Q ss_conf             829989999999
Q gi|254780388|r  430 EANSTHELNKIF  441 (458)
Q Consensus       430 ~a~~~~eL~~aF  441 (458)
                      .+.+.++|...-
T Consensus       163 ~~~~~~~L~~~~  174 (184)
T d1atza_         163 KLQRIEDLPTMV  174 (184)
T ss_dssp             EESSTTHHHHHH
T ss_pred             EECCHHHHHHHH
T ss_conf             937988888899


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: vWA-like
superfamily: vWA-like
family: Integrin A (or I) domain
domain: von Willebrand factor A3 domain, vWA3
species: Human (Homo sapiens) [TaxId: 9606]