HHSEARCH alignment of GI: 254780388 and SCOP domain: d1ijba_

Alignment
>d1ijba_ c.62.1.1 (A:) von Willebrand factor A1 domain, vWA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32  E-value=2e-10  Score=82.07  Aligned_cols=155  Identities=12%  Similarity=0.140  Sum_probs=103.9

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC--CCCHHHHHHHHHHHC
Q ss_conf             777665221123467756665201211006776655655768121005666656412567777--764588999998623
Q gi|254780388|r  274 VRDALASVIRSIKKIDNVNDTVRMGATFFNDRVISDPSFSWGVHKLIRTIVKTFAIDENEMGS--TAINDAMQTAYDTII  351 (458)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~--T~~~~gl~~g~~~Ls  351 (458)
                      .+..+..++......   ....+.+...|+.......++.+.   .++..+...+..+...|+  |+...+|.++.+.+.
T Consensus        34 ~k~fv~~~i~~l~~~---~~~~rvavv~y~~~~~~~~~l~~~---~~~~~l~~~i~~l~~~~g~~~~~~~al~~~~~~~~  107 (202)
T d1ijba_          34 LKAFVVDMMERLRVS---QKWVRVAVVEYHDGSHAYIGLKDR---KRPSELRRIASQVKYAGSQVASTSEVLKYTLFQIF  107 (202)
T ss_dssp             HHHHHHHHHHTBCBS---TTSEEEEEEEESSSEEEEECTTCC---CCHHHHHHHHHTCCCCCBSCCCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHCCC---CCCCEEEEEEEECCEEEECCCCCC---CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             999999999973258---887379999974230352277652---06999999998665552001009999999999765


Q ss_pred             CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC-CHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCC---CCC
Q ss_conf             66665444456677750699999606688885-40899999999879689999943788743117899986068---983
Q gi|254780388|r  352 SSNEDEVHRMKNNLEAKKYIVLLTDGENTQDN-EEGIAICNKAKSQGIRIMTIAFSVNKTQQEKARYFLSNCAS---PNS  427 (458)
Q Consensus       352 ~~~~~~~~~~~~~~~~~K~iil~TDG~n~~~~-~~~~~~C~~~K~~gI~IytI~f~~~~~~~~~~~~~lk~CAs---~~~  427 (458)
                      ...        ..+...|++|++|||...... .......+.+|+.||+||+||++...+.     ..|+..|+   ..+
T Consensus       108 ~~~--------~r~~~~k~vivitdg~~~~~~~~~~~~~~~~l~~~gv~i~~Vgig~~~~~-----~~L~~ia~~~~~~~  174 (202)
T d1ijba_         108 SKI--------DRPEASRIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPHANL-----KQIRLIEKQAPENK  174 (202)
T ss_dssp             SSC--------SCTTSEEEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEESTTSCH-----HHHHHHHHHCTTCC
T ss_pred             HHC--------CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCH-----HHHHHHHCCCCCCC
T ss_conf             520--------47777515788534688864216899999999985996899985785799-----99999851899676


Q ss_pred             EEEECCHHHHHHHHHHHHHH
Q ss_conf             78829989999999999875
Q gi|254780388|r  428 FFEANSTHELNKIFRDRIGN  447 (458)
Q Consensus       428 yy~a~~~~eL~~aF~~~i~~  447 (458)
                      +|.+.+-++|.+.+.+++..
T Consensus       175 ~~~~~~~~~L~~~~~~i~~~  194 (202)
T d1ijba_         175 AFVLSSVDELEQQRDEIVSY  194 (202)
T ss_dssp             CEEESSGGGHHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHHHHHHH
T ss_conf             89958999999999999998


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: vWA-like
superfamily: vWA-like
family: Integrin A (or I) domain
domain: von Willebrand factor A1 domain, vWA1
species: Human (Homo sapiens) [TaxId: 9606]