HHSEARCH alignment of GI: 254780388 and SCOP domain: d1shux_

Alignment
>d1shux_ c.62.1.1 (X:) Capillary morphogenesis protein 2 domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46  E-value=2.5e-12  Score=94.24  Aligned_cols=137  Identities=15%  Similarity=0.166  Sum_probs=99.0

Q ss_pred             CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf             52012110067766556557681210056666564125677777645889999986236666544445667775069999
Q gi|254780388|r  294 TVRMGATFFNDRVISDPSFSWGVHKLIRTIVKTFAIDENEMGSTAINDAMQTAYDTIISSNEDEVHRMKNNLEAKKYIVL  373 (458)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~T~~~~gl~~g~~~Ls~~~~~~~~~~~~~~~~~K~iil  373 (458)
                      ..+.+...|+.......++.........  ....+..+.+.|+|+...+|..+.+.+....         ..+..|++|+
T Consensus        40 ~~rvglv~fs~~~~~~~~l~~~~~~~~~--~l~~l~~~~~~g~t~~~~al~~~~~~~~~~~---------~~~~~~~ivl  108 (181)
T d1shux_          40 EMRLSFIVFSSQATIILPLTGDRGKISK--GLEDLKRVSPVGETYIHEGLKLANEQIQKAG---------GLKTSSIIIA  108 (181)
T ss_dssp             TEEEEEEEESSSEEEEEEEECCHHHHHH--HHHHHHTCCCCSCCCHHHHHHHHHHHHHHHT---------GGGSCEEEEE
T ss_pred             CCEEEEEEEECCEEEEEEECCCHHHHHH--HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC---------CCCCCEEEEE
T ss_conf             9789999960423799972488899999--7653222367785068999999998763003---------5787528999


Q ss_pred             EECCCCCCCCCH-HHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCC-CCCEEEECC-HHHHHHHHHHHHHH
Q ss_conf             960668888540-899999999879689999943788743117899986068-983788299-89999999999875
Q gi|254780388|r  374 LTDGENTQDNEE-GIAICNKAKSQGIRIMTIAFSVNKTQQEKARYFLSNCAS-PNSFFEANS-THELNKIFRDRIGN  447 (458)
Q Consensus       374 ~TDG~n~~~~~~-~~~~C~~~K~~gI~IytI~f~~~~~~~~~~~~~lk~CAs-~~~yy~a~~-~~eL~~aF~~~i~~  447 (458)
                      +|||..+..... .....+.+|+.||.||+||++. .     ....|+..|+ ++++|.+.+ -++|.+.+.+++.+
T Consensus       109 iTDG~~~~~~~~~~~~~~~~~k~~gv~v~~vgig~-~-----~~~~L~~ia~~~~~~~~~~~~~~~L~~~~~~i~~~  179 (181)
T d1shux_         109 LTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLD-F-----EQAQLERIADSKEQVFPVKGGFQALKGIINSILAQ  179 (181)
T ss_dssp             EECCCCCTTHHHHHHHHHHHHHHTTCEEEEEECSS-C-----CHHHHHHHSSSGGGEEESSSTTHHHHHHHHHHHHT
T ss_pred             ECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECC-C-----CHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH
T ss_conf             24787788863899999999997898899999685-4-----89999998489996599459999999999999863


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: vWA-like
superfamily: vWA-like
family: Integrin A (or I) domain
domain: Capillary morphogenesis protein 2 domain
species: Human (Homo sapiens) [TaxId: 9606]