HHSEARCH alignment of GI: 254780388 and SCOP domain: d1tyeb2

Alignment

Probab=98.24  E-value=4.9e-05  Score=47.60  Aligned_cols=116  Identities=11%  Similarity=0.074  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCEEEEEEECCCCCCC----------------
Q ss_conf             05666656412567777764588999998623-6666544445667775069999960668888----------------
Q gi|254780388|r  320 IRTIVKTFAIDENEMGSTAINDAMQTAYDTII-SSNEDEVHRMKNNLEAKKYIVLLTDGENTQD----------------  382 (458)
Q Consensus       320 ~~~~~~~~i~~~~~~g~T~~~~gl~~g~~~Ls-~~~~~~~~~~~~~~~~~K~iil~TDG~n~~~----------------  382 (458)
                      +.......++.+.+.||.+.+++..-|..... ......|     ..+..|++||+||.-....                
T Consensus        93 d~~~f~~~l~~~~~~GggD~pE~~~~Al~~a~~~~~~i~W-----r~~a~r~viliTDA~~H~~~d~~l~g~~~~~d~~~  167 (248)
T d1tyeb2          93 QVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCDEKIGW-----RNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQC  167 (248)
T ss_dssp             CHHHHHHHHTTCCCCCCSSSSBCHHHHHHHHHHCHHHHTC-----CTTSEEEEEEEESSCBCCTTGGGGGTCCSCCCCCC
T ss_pred             CHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCC-----CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             9999999985011316889750389999999987630798-----88860899998878755453123323345677755


Q ss_pred             ---------------CCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHC--CCCCEEEE--CCHHHHHHHHHH
Q ss_conf             ---------------54089999999987968999994378874311789998606--89837882--998999999999
Q gi|254780388|r  383 ---------------NEEGIAICNKAKSQGIRIMTIAFSVNKTQQEKARYFLSNCA--SPNSFFEA--NSTHELNKIFRD  443 (458)
Q Consensus       383 ---------------~~~~~~~C~~~K~~gI~IytI~f~~~~~~~~~~~~~lk~CA--s~~~yy~a--~~~~eL~~aF~~  443 (458)
                                     -.....+++++++++|.++.+   +..    ...+.+++-+  .+|.++..  .+.+.|.+..++
T Consensus       168 ~~~~~~~~~~~~~~dyps~~ql~~~l~~~~i~~ifa---vt~----~~~~~Y~~l~~~~~g~~~~~l~~dssNi~~lI~~  240 (248)
T d1tyeb2         168 HVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFA---VTE----NVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVD  240 (248)
T ss_dssp             CBCTTSBBGGGGTSCCCCHHHHHHHHHHTTEEEEEE---ECG----GGHHHHHHHHHTSTTCEEEECSSCCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEE---ECC----HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
T ss_conf             467778535654345788899999999829579999---883----1568999999856985798705534449999999


Q ss_pred             HHHH
Q ss_conf             9875
Q gi|254780388|r  444 RIGN  447 (458)
Q Consensus       444 ~i~~  447 (458)
                      ...+
T Consensus       241 ~y~~  244 (248)
T d1tyeb2         241 AYGK  244 (248)
T ss_dssp             HHHT
T ss_pred             HHHH
T ss_conf             9998

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: vWA-like
superfamily: vWA-like
family: Integrin A (or I) domain
domain: Integrin beta A domain
species: Human (Homo sapiens) [TaxId: 9606]