RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780389|ref|YP_003064802.1| hypothetical protein CLIBASIA_01370 [Candidatus Liberibacter asiaticus str. psy62] (45 letters) >2q22_A Uncharacterized protein; YP_323524.1, structural genomics, joint center for structural genomics, JCSG; HET: PG4; 2.11A {Anabaena variabilis atcc 29413} (A:) Length = 139 Score = 27.0 bits (60), Expect = 0.82 Identities = 9/30 (30%), Positives = 19/30 (63%), Gaps = 6/30 (20%) Query: 15 FLKFNGEGG------YSKYYRNFIISCRTY 38 ++K NG+ G Y+ ++R ++SC++Y Sbjct: 92 YIKLNGKNGLCYLDSYAGHHRGVLVSCQSY 121 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.338 0.153 0.503 Gapped Lambda K H 0.267 0.0655 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 407,925 Number of extensions: 12022 Number of successful extensions: 49 Number of sequences better than 10.0: 1 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 3 Length of query: 45 Length of database: 4,956,049 Length adjustment: 17 Effective length of query: 28 Effective length of database: 4,381,364 Effective search space: 122678192 Effective search space used: 122678192 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.7 bits) S2: 50 (23.2 bits)