HHsearch alignment for GI: 254780390 and conserved domain: cd00595

>cd00595 NDPk Nucleoside diphosphate kinases (NDP kinases, NDPks): NDP kinases, responsible for the synthesis of nucleoside triphosphates (NTPs), are involved in numerous regulatory processes associated with proliferation, development, and differentiation. They are vital for DNA/RNA synthesis, cell division, macromolecular metabolism and growth. The enzymes generate NTPs or their deoxy derivatives by terminal (gamma) phosphotransfer from an NTP such as ATP or GTP to any nucleoside diphosphate (NDP) or its deoxy derivative. The sequence of NDPk has been highly conserved through evolution. There is a single histidine residue conserved in all known NDK isozymes, which is involved in the catalytic mechanism. The first confirmed metastasis suppressor gene was the NDP kinase protein encoded by the nm23 gene. Unicellular organisms generally possess only one gene encoding NDP kinase, while most multicellular organisms possess not only an ortholog that provides most of the NDP kinase enzymatic a
Probab=100.00  E-value=0  Score=343.86  Aligned_cols=130  Identities=45%  Similarity=0.806  Sum_probs=128.3

Q ss_pred             CEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCHH
Q ss_conf             10230455237718987999999972555892100112699999999888514742100122100111577111164017
Q gi|254780390|r    4 EKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEAI   83 (140)
Q Consensus         4 e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~naV   83 (140)
T Consensus         1 ErTl~iIKPdav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~~~a~~~Y~~~~~k~ff~~lv~~mtsGpv~~lvl~g~naV   80 (133)
T cd00595           1 ERTLALIKPDAVAEGLLGEIIMRIEDAGFEIVAMKELHLTEEQAEEFYVEHKGRPFFPDLVQFMSSGPVVAMILEKDNAV   80 (133)
T ss_pred             CCEEEEECCCHHCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEECCCHH
T ss_conf             91799989315405889999999998799899875022889999999999846341778999963798499998427699


Q ss_pred             HHHHHHCCCCCHHHCC---CCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHC
Q ss_conf             8999661889977768---9970001011522100440699899999998726
Q gi|254780390|r   84 SKNREVMGDTDPKKAL---KGTIRNKYGISIGENSIHGSDSLKTALEEISYWF  133 (140)
Q Consensus        84 ~~~R~l~Gptdp~~a~---p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF  133 (140)
T Consensus        81 ~~~R~l~Gpt~p~~A~~~~P~siR~~yg~~~~~N~vHgSds~e~A~~Ei~~fF  133 (133)
T cd00595          81 GEWREMLGPTNPEIARHLAPGSLRADFGTDVLRNAVHGSDSVESAAREIAFFF  133 (133)
T ss_pred             HHHHHHHCCCCHHHHHHHCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHHC
T ss_conf             99998738998278887589865777367777608447899999999998529