HHsearch alignment for GI: 254780390 and conserved domain: smart00562
>smart00562 NDK These are enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates. These enzymes play important roles in bacterial growth, signal transduction and pathogenicity.
Probab=100.00 E-value=0 Score=361.00 Aligned_cols=135 Identities=48% Similarity=0.829 Sum_probs=133.7
Q ss_pred CEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCHH
Q ss_conf 10230455237718987999999972555892100112699999999888514742100122100111577111164017
Q gi|254780390|r 4 EKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEAI 83 (140)
Q Consensus 4 e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~naV 83 (140)
T Consensus 1 E~Tl~iIKPdav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~~~a~~fY~~~~~kpff~~Lv~~m~sGp~~alvl~g~naV 80 (135)
T smart00562 1 ERTLAIIKPDAVQRGLIGEIISRFERKGFKIVAMKMLQLTEELAEEFYAEHKGKPFFNDLVEFMTSGPVVAMVLEGEDAV 80 (135)
T ss_pred CEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCHH
T ss_conf 90699989326524788999999998699883413024899999999998844654275766434798799998569999
Q ss_pred HHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHC
Q ss_conf 8999661889977768997000101152210044069989999999872685650
Q gi|254780390|r 84 SKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEI 138 (140)
Q Consensus 84 ~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei 138 (140)
T Consensus 81 ~~~R~l~Gpt~p~~a~p~siR~~fg~~~~~N~vHgSds~e~A~~Ei~~fF~~~e~ 135 (135)
T smart00562 81 KTWRTLMGPTDPREAAPGTIRGDFGLDIGRNAVHGSDSPESAEREIALFFPESEI 135 (135)
T ss_pred HHHHHHHCCCCHHHCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCCCCC
T ss_conf 9999987889933448873578746775545957889999999999854991009