HHSEARCH alignment of GI: 254780390 and SCOP domain: d1nb2a_

Alignment
>d1nb2a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Bacillus halodenitrificans [TaxId: 1482]}
Probab=100.00  E-value=0  Score=355.06  Aligned_cols=137  Identities=42%  Similarity=0.689  Sum_probs=135.0

Q ss_pred             CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH
Q ss_conf             31023045523771898799999997255589210011269999999988851474210012210011157711116401
Q gi|254780390|r    3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA   82 (140)
Q Consensus         3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na   82 (140)
                      -||||+|||||||+++++|+|+++|+++||.|+++|++++|+++|++||.+|+++|||+.|+.||+||||+||+|+|+||
T Consensus         1 kErTl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~~~ff~~lv~~mtsgP~~a~vl~g~na   80 (149)
T d1nb2a_           1 KERTFLMVKPDGVQRNLVGEVVKRFESKGLKLAGAKLMVISKDGAAAHYAELGGGPFFGGLVGGATSGPVFAMVWEGLNA   80 (149)
T ss_dssp             CCCEEEEECHHHHHTTCHHHHHHHHHTTTCEEEEEECCCCTTHHHHHHTCTTSSSTTHHHHHHHHTSSCCBEEEEESTTH
T ss_pred             CCEEEEEECCCHHCCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHCCCCEECCHHHHCCCCCEEEEEEECCHH
T ss_conf             94699998913430478999999999879989997767358999999999870674033145523037548988604026


Q ss_pred             HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf             789996618899777689970001011522100440699899999998726856506
Q gi|254780390|r   83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII  139 (140)
Q Consensus        83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      |.+||+|+|||||.+|+|+||||+||++.++|+||||||+++|+||++||||++|++
T Consensus        81 V~~~R~l~Gptdp~~A~p~siR~~yg~~~~~N~vH~Sds~e~A~rEi~~fF~~~e~~  137 (149)
T d1nb2a_          81 AATARQILGATNPSDAAPGTIRGDFGVSAGRNAIHGSDSAGSAAKEIGAFFGGGEAA  137 (149)
T ss_dssp             HHHHHHHHCCSSTTSSCTTSHHHHSCSCSSSCSEEECSSHHHHHHHHHHHSCSSSSC
T ss_pred             HHHHHHHHCCCCHHHCCCCHHHHHHEEEECCCEEECCCCHHHHHHHHHHCCCHHHCC
T ss_conf             999999728998000485113212305200010267999899999998458922434


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleoside diphosphate kinase, NDK
family: Nucleoside diphosphate kinase, NDK
domain: Nucleoside diphosphate kinase, NDK
species: Bacillus halodenitrificans [TaxId: 1482]