HHSEARCH alignment of GI: 254780390 and SCOP domain: d1wkja1

Alignment
>d1wkja1 d.58.6.1 (A:1-137) Nucleoside diphosphate kinase, NDK {Thermus thermophilus [TaxId: 274]}
Probab=100.00  E-value=0  Score=356.82  Aligned_cols=137  Identities=43%  Similarity=0.769  Sum_probs=135.7

Q ss_pred             CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH
Q ss_conf             31023045523771898799999997255589210011269999999988851474210012210011157711116401
Q gi|254780390|r    3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA   82 (140)
Q Consensus         3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na   82 (140)
                      ||+||+||||||++++++|+|+++|+++||+|+++|++++|+++|++||.+|+++|||++|++||+||||++|+|+|+||
T Consensus         1 ~E~Tl~iIKPdav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~k~f~~~lv~~m~SGp~~~l~l~g~na   80 (137)
T d1wkja1           1 MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGV   80 (137)
T ss_dssp             CCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGSSSSSHHHHHHHHTSSCEEEEEEESTTH
T ss_pred             CCEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEECCH
T ss_conf             95569998930541478999999999879999997721488899976559986022236400131369998999970410


Q ss_pred             HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf             789996618899777689970001011522100440699899999998726856506
Q gi|254780390|r   83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII  139 (140)
Q Consensus        83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      |.+||+++|||||.+|+|+||||+||++.++|+||||||+++|+||++||||++||+
T Consensus        81 v~~~r~l~Gpt~p~~a~p~siR~~yg~~~~~N~vH~Sds~e~A~rEi~~fF~~~ei~  137 (137)
T d1wkja1          81 VAEVRKMMGATHPKDALPGTIRGDFATTIDENVIHGSATLEDAQREIALFFRPEELL  137 (137)
T ss_dssp             HHHHHHHHCCSSTTTCCTTSHHHHHCCCSTTCSEEECSSHHHHHHHHHHHSCGGGCC
T ss_pred             HHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCHHHCC
T ss_conf             434654105699476999875887146667788467899999999999608923139


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleoside diphosphate kinase, NDK
family: Nucleoside diphosphate kinase, NDK
domain: Nucleoside diphosphate kinase, NDK
species: Thermus thermophilus [TaxId: 274]