HHSEARCH alignment of GI: 254780390 and SCOP domain: d2az3a1

Alignment
>d2az3a1 d.58.6.1 (A:4-155) Nucleoside diphosphate kinase, NDK {Archaeon Halobacterium salinarum [TaxId: 2242]}
Probab=100.00  E-value=0  Score=351.94  Aligned_cols=138  Identities=44%  Similarity=0.748  Sum_probs=134.7

Q ss_pred             CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH
Q ss_conf             31023045523771898799999997255589210011269999999988851474210012210011157711116401
Q gi|254780390|r    3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA   82 (140)
Q Consensus         3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na   82 (140)
                      -||||+|||||||+++++|+|+++|+++||+|+++|++++|+++|++||.+|+++|||+.|++||+||||+||+|+|+||
T Consensus         2 ~ErTl~iIKPDav~~~~~geIi~~ie~~Gf~Iv~~k~~~ls~e~a~~~Y~~~~~k~ff~~lv~~m~sGpvvalvl~g~~a   81 (152)
T d2az3a1           2 DERTFVMVKPDGVQRGLIGDIVTRLETKGLKMVGGKFMRIDEELAHEHYAEHEDKPFFDGLVSFITSGPVFAMVWEGADA   81 (152)
T ss_dssp             CCEEEEEECHHHHHTTCHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEESTTH
T ss_pred             CCEEEEEECCCHHCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEEEECCCH
T ss_conf             83699998945320577899999999869989985664279999999898716875411210004668889999715788


Q ss_pred             HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHH--HHHHHHHCCHHHCCC
Q ss_conf             7899966188997776899700010115221004406998999--999987268565069
Q gi|254780390|r   83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTA--LEEISYWFARNEIIG  140 (140)
Q Consensus        83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a--~rEi~~fF~~~ei~g  140 (140)
                      |.+||+++|||||++|+|+||||+||.+.++|+||||||+++|  +|||+||||++||+.
T Consensus        82 v~~~R~l~Gpt~p~~a~p~siR~~fg~~~~~N~vH~SDs~e~A~~erEi~~fF~~~ei~~  141 (152)
T d2az3a1          82 TRQVRQLMGATDAQDAAPGTIRGDYGNDLGHNLIHGSDHEDEGANEREIALFFDDDELVD  141 (152)
T ss_dssp             HHHHHHHHCCSSGGGSCTTSHHHHHCCCSSSCSEEECCTTSTTHHHHHHHHHCCTTSSCC
T ss_pred             HHHHHHHHCCCCHHHCCCCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHCCCHHHCCC
T ss_conf             999999848898322399873440478705860788899466323506653218146001


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleoside diphosphate kinase, NDK
family: Nucleoside diphosphate kinase, NDK
domain: Nucleoside diphosphate kinase, NDK
species: Archaeon Halobacterium salinarum [TaxId: 2242]