HHSEARCH alignment of GI: 254780390 and SCOP domain: d2dyaa1

Alignment

Probab=100.00  E-value=0  Score=344.35  Aligned_cols=137  Identities=42%  Similarity=0.712  Sum_probs=133.2

Q ss_pred             CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH
Q ss_conf             31023045523771898799999997255589210011269999999988851474210012210011157711116401
Q gi|254780390|r    3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA   82 (140)
Q Consensus         3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na   82 (140)
                      .||||+|||||||+++++|+|+++|+++||.|+++|++++|+++|++||.+|+|+|||++|++||+||||+||+|+|+||
T Consensus         2 ~ErTlaiIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~~~f~~~lv~~m~sGp~~alvl~~~na   81 (153)
T d2dyaa1           2 TERTLVIIKPDAVVRGLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKALIDYITKTPVVVMVLEGRYA   81 (153)
T ss_dssp             EEEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEEEETH
T ss_pred             CEEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCCCH
T ss_conf             51699998941440478999999999879989888756268999999999982141047788887533202453135577


Q ss_pred             HHHHHHHCCCCCHHHCCCCCCCHHCCCC---HHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf             7899966188997776899700010115---22100440699899999998726856506
Q gi|254780390|r   83 ISKNREVMGDTDPKKALKGTIRNKYGIS---IGENSIHGSDSLKTALEEISYWFARNEII  139 (140)
Q Consensus        83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~---~~~N~vH~Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      |..||+|+|||||.+|+|+|||++||.+   ..+|++|||||+++|+|||+||||++||+
T Consensus        82 v~~~r~l~Gptdp~~A~p~tiR~~fg~~~~d~~~N~vHgSds~e~A~rEi~~fF~~~ei~  141 (153)
T d2dyaa1          82 VEVVRKMAGATDPKDAAPGTIRGDFGLEVSDAICNVIHASDSKESAEREISLFFKPEELF  141 (153)
T ss_dssp             HHHHHHHHCCSSGGGSCTTSHHHHHCCCCSSSCCCSEEECSSHHHHHHHHHHHCCGGGCC
T ss_pred             HHHHHHHHCCCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHC
T ss_conf             889888857899667699984114313355245676327899899999999718913513

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleoside diphosphate kinase, NDK
family: Nucleoside diphosphate kinase, NDK
domain: Nucleoside diphosphate kinase, NDK
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]