Query         gi|254780390|ref|YP_003064803.1| nucleoside diphosphate kinase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 140
No_of_seqs    116 out of 2106
Neff          6.2 
Searched_HMMs 13730
Date          Wed Jun  1 03:27:40 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780390.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1ehwa_ d.58.6.1 (A:) Nucleosi 100.0       0       0  359.8  12.7  139    1-139     2-141 (143)
  2 d1nhkl_ d.58.6.1 (L:) Nucleosi 100.0       0       0  358.3  12.1  138    2-139     1-138 (143)
  3 d1w7wa_ d.58.6.1 (A:) Nucleosi 100.0       0       0  357.2  13.1  139    2-140     2-140 (151)
  4 d1hlwa_ d.58.6.1 (A:) Nucleosi 100.0       0       0  357.2  12.6  139    1-139     1-139 (150)
  5 d1zs6a1 d.58.6.1 (A:18-169) Nu 100.0       0       0  357.1  12.5  139    1-139     2-140 (152)
  6 d1xqia1 d.58.6.1 (A:14-195) Nu 100.0       0       0  360.0   9.7  138    2-139     1-181 (182)
  7 d1xiqa_ d.58.6.1 (A:) Nucleosi 100.0       0       0  356.4  12.5  137    3-139     1-137 (149)
  8 d1wkja1 d.58.6.1 (A:1-137) Nuc 100.0       0       0  356.8  11.9  137    3-139     1-137 (137)
  9 d3bbba1 d.58.6.1 (A:2-151) Nuc 100.0       0       0  355.9  12.5  138    2-139     2-139 (150)
 10 d1s57a_ d.58.6.1 (A:) Nucleosi 100.0       0       0  357.2  11.2  138    2-139     4-141 (153)
 11 d1u8wa_ d.58.6.1 (A:) Nucleosi 100.0       0       0  356.5  10.4  136    3-138     1-136 (149)
 12 d1nb2a_ d.58.6.1 (A:) Nucleosi 100.0       0       0  355.1   9.4  137    3-139     1-137 (149)
 13 d2az3a1 d.58.6.1 (A:4-155) Nuc 100.0       0       0  351.9   9.9  138    3-140     2-141 (152)
 14 d2dyaa1 d.58.6.1 (A:6-158) Nuc 100.0       0       0  344.3  11.7  137    3-139     2-141 (153)
 15 d1k44a_ d.58.6.1 (A:) Nucleosi 100.0       0       0  341.4  11.5  134    3-136     1-135 (135)
 16 d2b8qa1 d.58.6.1 (A:2-129) Nuc 100.0       0       0  317.3  11.3  127    4-134     1-128 (128)

No 1  
>d1ehwa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Human (Homo sapiens), NDK4 [TaxId: 9606]}
Probab=100.00  E-value=0  Score=359.79  Aligned_cols=139  Identities=35%  Similarity=0.643  Sum_probs=136.4

Q ss_pred             CC-CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCC
Q ss_conf             96-31023045523771898799999997255589210011269999999988851474210012210011157711116
Q gi|254780390|r    1 MV-IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKG   79 (140)
Q Consensus         1 m~-~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g   79 (140)
                      |+ .||||+||||||++++++|+|+++|+++||.|+++|++++|+++|++||.+|++||||++|++||+||||+||+|+|
T Consensus         2 m~~~E~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~Iv~~k~~~lt~e~a~~~Y~~~~~k~f~~~lv~~m~sGp~~a~~l~g   81 (143)
T d1ehwa_           2 MGTRERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEG   81 (143)
T ss_dssp             CGGGCEEEEEECHHHHHTTCHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEES
T ss_pred             CCCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHEECCCCEEEEECCH
T ss_conf             87611699999934650378999999999859989660555169999999999983232455455100478887775230


Q ss_pred             CCHHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf             401789996618899777689970001011522100440699899999998726856506
Q gi|254780390|r   80 EEAISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII  139 (140)
Q Consensus        80 ~naV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      +|||..||+++|||||.+|+|+||||+||++.++|+||||||+++|+||++||||++||+
T Consensus        82 ~naV~~~R~l~Gpt~p~~a~p~siR~~yg~~~~~N~vH~Sds~e~A~~Ei~~fF~~~ei~  141 (143)
T d1ehwa_          82 YNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLWFQSSELV  141 (143)
T ss_dssp             TTHHHHHHHHHCCSSGGGSCTTSHHHHHCCCSSCCSEEECSSHHHHHHHHHHHCCGGGCC
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCEECCCCHHHHHHHHHHHCCHHHCC
T ss_conf             237899998756898353899980766527435788577899999999999719933324


No 2  
>d1nhkl_ d.58.6.1 (L:) Nucleoside diphosphate kinase, NDK {Myxococcus xanthus [TaxId: 34]}
Probab=100.00  E-value=0  Score=358.30  Aligned_cols=138  Identities=50%  Similarity=0.851  Sum_probs=136.4

Q ss_pred             CCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCC
Q ss_conf             63102304552377189879999999725558921001126999999998885147421001221001115771111640
Q gi|254780390|r    2 VIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEE   81 (140)
Q Consensus         2 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~n   81 (140)
                      +||+||+||||||++++++|+|+++|+++||+|+++|++++|+++|++||++|+++|||+.|++||+||||+||+|+|+|
T Consensus         1 a~E~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~~~ff~~lv~~mtSgpvva~vl~g~~   80 (143)
T d1nhkl_           1 AIERTLSIIKPDGLEKGVIGKIISRFEEKGLKPVAIRLQHLSQAQAEGFYAVHKARPFFKDLVQFMISGPVVLMVLEGEN   80 (143)
T ss_dssp             CEEEEEEEECHHHHHTTCHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEEEET
T ss_pred             CCHHEEEEECHHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEECC
T ss_conf             91361898890153257799999999986999999988608899999887764221018888742477987999998354


Q ss_pred             HHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf             1789996618899777689970001011522100440699899999998726856506
Q gi|254780390|r   82 AISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII  139 (140)
Q Consensus        82 aV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      ||.+||+++|||||.+|+|+||||+||.+.++|++|||||+++|+||++||||++||.
T Consensus        81 av~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~A~rEi~~fF~~~ei~  138 (143)
T d1nhkl_          81 AVLANRDIMGATNPAQAAEGTIRKDFATSIDKNTVHGSDSLENAKIEIAYFFRETEIH  138 (143)
T ss_dssp             HHHHHHHHHCCSSGGGCCTTSHHHHHCCSSSSCSEEECSSHHHHHHHHHHHCCGGGCC
T ss_pred             HHHHHHHHHCCCCHHHCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCHHHCC
T ss_conf             5889987605899556136554766056667678488999899999999729987763


No 3  
>d1w7wa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Pea (Pisum sativum) [TaxId: 3888]}
Probab=100.00  E-value=0  Score=357.16  Aligned_cols=139  Identities=40%  Similarity=0.682  Sum_probs=136.7

Q ss_pred             CCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCC
Q ss_conf             63102304552377189879999999725558921001126999999998885147421001221001115771111640
Q gi|254780390|r    2 VIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEE   81 (140)
Q Consensus         2 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~n   81 (140)
                      .||+||+||||||++++++|+|+++|+++||+|+++|++++|+++|++||.+|++||||++|++||+||||++|+|+|+|
T Consensus         2 ~~E~Tl~iIKPdav~~~~~g~Ii~~i~~~Gf~Iv~~k~~~lt~e~a~~~Y~~~~~k~ff~~lv~~mtsGpv~al~l~g~n   81 (151)
T d1w7wa_           2 ELERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVLIPTKQFAQQHYHDLKERPFFNGLCDFLSSGPVIAMVWEGEG   81 (151)
T ss_dssp             TTCEEEEEECHHHHHTTCHHHHHHHHHTTTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEESTT
T ss_pred             CCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEEECCCH
T ss_conf             71137899990043037899999999987998999887735899999999999736654521442157887667631302


Q ss_pred             HHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCCC
Q ss_conf             17899966188997776899700010115221004406998999999987268565069
Q gi|254780390|r   82 AISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEIIG  140 (140)
Q Consensus        82 aV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~g  140 (140)
                      ||..||+++|||||.+|+|+||||+||++.++|++|||||+++|+||++||||++||+-
T Consensus        82 aV~~~r~l~Gptdp~~a~p~siR~~fg~~~~~N~vH~Sds~e~A~~Ei~~fF~~~ei~~  140 (151)
T d1w7wa_          82 VITYGRKLIGATDPQKSAPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELVS  140 (151)
T ss_dssp             HHHHHHHHHCCSSGGGSCTTSHHHHHCCSGGGCCEEECCSHHHHHHHHHHHCCGGGCCC
T ss_pred             HHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCHHHHHHHHHHCCCHHHCEE
T ss_conf             67889987413880226997245764656677602678998999999997249204041


No 4  
>d1hlwa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Dictyostelium discoideum [TaxId: 44689]}
Probab=100.00  E-value=0  Score=357.25  Aligned_cols=139  Identities=38%  Similarity=0.682  Sum_probs=137.3

Q ss_pred             CCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCC
Q ss_conf             96310230455237718987999999972555892100112699999999888514742100122100111577111164
Q gi|254780390|r    1 MVIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGE   80 (140)
Q Consensus         1 m~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~   80 (140)
                      |..||||+|||||||+++++|+|+++|+++||.|+++|++++|+++|++||.+|+|+|||+.|+.||+||||+||+|+|+
T Consensus         1 ~~~E~Tl~iIKPDav~~~l~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~k~f~~~lv~~m~sGp~vam~l~g~   80 (150)
T d1hlwa_           1 VNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGK   80 (150)
T ss_dssp             CTTCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEEST
T ss_pred             CCCCEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECC
T ss_conf             97444899989224303789999999998799997756255789999999874058733133113102587556775046


Q ss_pred             CHHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf             01789996618899777689970001011522100440699899999998726856506
Q gi|254780390|r   81 EAISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII  139 (140)
Q Consensus        81 naV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      |||.+||+|+|||||.+++|+||||+||.+.++|++|||||+++|+||++||||++|++
T Consensus        81 naV~~~R~l~Gptdp~~~~p~tiR~~yg~~~~~N~vH~SDs~e~A~~Ei~~fF~~~ei~  139 (150)
T d1hlwa_          81 GVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIAGSDSVESANREIALWFKPEELL  139 (150)
T ss_dssp             THHHHHHHHHCCSSGGGSCTTSHHHHHCCBTTBCCEEECSSHHHHHHHHHHHCCGGGSC
T ss_pred             CHHHHHHHHHCCCCCCCCCCHHHHHHHEECCCCEEEECCCCHHHHHHHHHHCCCHHHCC
T ss_conf             67889988626888132684024444322156612677899899999999717967633


No 5  
>d1zs6a1 d.58.6.1 (A:18-169) Nucleoside diphosphate kinase, NDK {Human(Homo sapiens), NDK3 [TaxId: 9606]}
Probab=100.00  E-value=0  Score=357.06  Aligned_cols=139  Identities=39%  Similarity=0.697  Sum_probs=136.7

Q ss_pred             CCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCC
Q ss_conf             96310230455237718987999999972555892100112699999999888514742100122100111577111164
Q gi|254780390|r    1 MVIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGE   80 (140)
Q Consensus         1 m~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~   80 (140)
                      ++.||||+||||||++++++|+|+++|+++||+|+++|++++|+++|++||.+|+++|||+.|++||+||||++|+|+|+
T Consensus         2 ~~~ErTl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~k~f~~~Lv~~m~sGpvva~~l~g~   81 (152)
T d1zs6a1           2 GAHERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRLVKYMASGPVVAMVWQGL   81 (152)
T ss_dssp             GGGCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEEST
T ss_pred             CCCEEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCH
T ss_conf             97506999989324314789999999998699899976440789999998888605421778874147898888733422


Q ss_pred             CHHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf             01789996618899777689970001011522100440699899999998726856506
Q gi|254780390|r   81 EAISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII  139 (140)
Q Consensus        81 naV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      |||+.||+++|||||.+|+|+||||+||.+.++|+||||||+++|+||++||||++|++
T Consensus        82 nav~~~R~l~Gptdp~~A~p~siR~~fg~~~~~N~vH~Sds~e~A~rEi~~fF~~~e~~  140 (152)
T d1zs6a1          82 DVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVESARREIALWFRADELL  140 (152)
T ss_dssp             THHHHHHHHHCCSSGGGSCTTSHHHHHCCSGGGCSEEECSSHHHHHHHHHHHSCGGGSC
T ss_pred             HHHHHHHHHCCCCCHHCCCCHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHCCHHHCC
T ss_conf             58998897708998000672345454343266774478899999999999727944604


No 6  
>d1xqia1 d.58.6.1 (A:14-195) Nucleoside diphosphate kinase, NDK {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=100.00  E-value=0  Score=359.99  Aligned_cols=138  Identities=38%  Similarity=0.598  Sum_probs=133.6

Q ss_pred             CCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHC--------------------------
Q ss_conf             631023045523771898799999997255589210011269999999988851--------------------------
Q gi|254780390|r    2 VIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHK--------------------------   55 (140)
Q Consensus         2 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~--------------------------   55 (140)
                      .+||||+|||||||+++++|+||++|+++||+|+++|++++|+++|++||.+|+                          
T Consensus         1 p~ErTl~iIKPDav~~~lvg~Ii~~ie~~Gf~Iva~k~~~lt~e~a~~fY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (182)
T d1xqia1           1 PVEKTLLILKPDAVARGLVDEIISRFKKAGLKIVALKMVKASPEEIERFYPSSEEWLQSAGQKLLKAYQELGIDPRAKIG   80 (182)
T ss_dssp             CCCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCCHHHHHS
T ss_pred             CCCEEEEEECCCHHCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             97547999894054148899999999987998999760048999999999998887653002455566653024100012


Q ss_pred             -------CCCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCHHHCCCCCCCHHCCCCH----------HHEEEEE
Q ss_conf             -------47421001221001115771111640178999661889977768997000101152----------2100440
Q gi|254780390|r   56 -------DRPFFPELVQAMISGPVFLQVLKGEEAISKNREVMGDTDPKKALKGTIRNKYGISI----------GENSIHG  118 (140)
Q Consensus        56 -------~k~ff~~lv~~m~sGpv~alvl~g~naV~~~R~l~Gptdp~~a~p~tiR~~fg~~~----------~~N~vH~  118 (140)
                             |||||++|++|||||||+||+|+|+|||++||+|+|||||++|+|+||||+||.|.          .+|+|||
T Consensus        81 ~~~~~~~gk~f~~~Lv~~mtSgPvva~vleg~~aV~~~R~l~GptdP~~A~pgtIR~~fg~d~~~~~~~~~~~~rN~vH~  160 (182)
T d1xqia1          81 TDDPVEVGRIIKRNLVKYMTSGPNVVMVLKGNRAVEIVRKLVGPTSPHSAPPGTIRGDYSIDSPDLAAEEGRVVFNLVHA  160 (182)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTSSCEEEEEEESTTHHHHHHHHHCCSCGGGSCTTSHHHHHCCCCHHHHHHTTSCCCCSEEE
T ss_pred             CCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEC
T ss_conf             33310147752688999980686578985266799999998279994658999607763767410001236665420588


Q ss_pred             CCCHHHHHHHHHHHCCHHHCC
Q ss_conf             699899999998726856506
Q gi|254780390|r  119 SDSLKTALEEISYWFARNEII  139 (140)
Q Consensus       119 Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      |||+++|+|||++|||++||+
T Consensus       161 SDs~e~A~rEi~~fF~~~ei~  181 (182)
T d1xqia1         161 SDSPSEAEREIRFWFREEEVL  181 (182)
T ss_dssp             CSSHHHHHHHHHHHCCGGGSC
T ss_pred             CCCHHHHHHHHHHCCCHHHCC
T ss_conf             899999999999648934216


No 7  
>d1xiqa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}
Probab=100.00  E-value=0  Score=356.43  Aligned_cols=137  Identities=37%  Similarity=0.684  Sum_probs=135.5

Q ss_pred             CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH
Q ss_conf             31023045523771898799999997255589210011269999999988851474210012210011157711116401
Q gi|254780390|r    3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA   82 (140)
Q Consensus         3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na   82 (140)
                      |||||+||||||++++++|+|+++|+++||+|+++|++++|+++|++||++|+|+|||++|++||+||||++|+|+|+||
T Consensus         1 ~e~Tl~iIKPdav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~k~ff~~lv~~mtsGp~v~~~l~~~na   80 (149)
T d1xiqa_           1 MEKSFIMIKPDGVQRGLVGTIIKRFEKKGYKLIAIKMLNPTEEILKEHYKELSDQPFFKNLVAYISKGPVVAMVWEGVDM   80 (149)
T ss_dssp             CCEEEEEECHHHHHTTCHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHTGGGSSSSSCTTHHHHHTTSCEEEEEEESTTH
T ss_pred             CCEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCCHH
T ss_conf             95359999900541578899999999879989999864178999999999873152100145410167779998423126


Q ss_pred             HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf             789996618899777689970001011522100440699899999998726856506
Q gi|254780390|r   83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII  139 (140)
Q Consensus        83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      |..||+++|||||.+|+|+||||+||.+.++|++|||||+++|+||++||||++||+
T Consensus        81 v~~~R~l~Gptdp~~a~~~siR~~fg~~~~~N~vHgSds~e~A~rEi~~fF~~~ei~  137 (149)
T d1xiqa_          81 VKQGRKLIGETNPLTSNTGTIRGDFCLEVSKNVIHGSDSVASANKEINIWFKAEELT  137 (149)
T ss_dssp             HHHHHHHHCCSSTTTSCTTSHHHHHCCBTTBCSEEECSSHHHHHHHHHHHCCGGGSC
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCHHHHHHHHHHCCCHHHCC
T ss_conf             677887626898133899983533303236606688899999999999707902324


No 8  
>d1wkja1 d.58.6.1 (A:1-137) Nucleoside diphosphate kinase, NDK {Thermus thermophilus [TaxId: 274]}
Probab=100.00  E-value=0  Score=356.82  Aligned_cols=137  Identities=43%  Similarity=0.769  Sum_probs=135.7

Q ss_pred             CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH
Q ss_conf             31023045523771898799999997255589210011269999999988851474210012210011157711116401
Q gi|254780390|r    3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA   82 (140)
Q Consensus         3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na   82 (140)
                      ||+||+||||||++++++|+|+++|+++||+|+++|++++|+++|++||.+|+++|||++|++||+||||++|+|+|+||
T Consensus         1 ~E~Tl~iIKPdav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~k~f~~~lv~~m~SGp~~~l~l~g~na   80 (137)
T d1wkja1           1 MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGV   80 (137)
T ss_dssp             CCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGSSSSSHHHHHHHHTSSCEEEEEEESTTH
T ss_pred             CCEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEECCH
T ss_conf             95569998930541478999999999879999997721488899976559986022236400131369998999970410


Q ss_pred             HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf             789996618899777689970001011522100440699899999998726856506
Q gi|254780390|r   83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII  139 (140)
Q Consensus        83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      |.+||+++|||||.+|+|+||||+||++.++|+||||||+++|+||++||||++||+
T Consensus        81 v~~~r~l~Gpt~p~~a~p~siR~~yg~~~~~N~vH~Sds~e~A~rEi~~fF~~~ei~  137 (137)
T d1wkja1          81 VAEVRKMMGATHPKDALPGTIRGDFATTIDENVIHGSATLEDAQREIALFFRPEELL  137 (137)
T ss_dssp             HHHHHHHHCCSSTTTCCTTSHHHHHCCCSTTCSEEECSSHHHHHHHHHHHSCGGGCC
T ss_pred             HHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCHHHCC
T ss_conf             434654105699476999875887146667788467899999999999608923139


No 9  
>d3bbba1 d.58.6.1 (A:2-151) Nucleoside diphosphate kinase, NDK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=355.93  Aligned_cols=138  Identities=44%  Similarity=0.772  Sum_probs=136.2

Q ss_pred             CCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCC
Q ss_conf             63102304552377189879999999725558921001126999999998885147421001221001115771111640
Q gi|254780390|r    2 VIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEE   81 (140)
Q Consensus         2 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~n   81 (140)
                      .|||||+||||||++++++|+|+++|+++||+|+++|++++|+++|++||++|+|||||+.|++||+||||++|+|+|+|
T Consensus         2 ~~e~Tl~lIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~k~ff~~lv~~m~sgPv~al~l~g~n   81 (150)
T d3bbba1           2 NLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLN   81 (150)
T ss_dssp             TTCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEESTT
T ss_pred             CHHEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHEEECCCCEEEEEECCCC
T ss_conf             70006999890465157889999999987998999873317899999988998613334311100127887455533668


Q ss_pred             HHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf             1789996618899777689970001011522100440699899999998726856506
Q gi|254780390|r   82 AISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII  139 (140)
Q Consensus        82 aV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      ||..||+++|||||.+|+|+||||+||++.++|++|||||+++|+||+++|||++||+
T Consensus        82 aV~~~R~l~Gpt~p~~a~p~tiR~~fg~~~~~N~vH~Sds~e~A~rEi~~fF~~~ei~  139 (150)
T d3bbba1          82 VVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELV  139 (150)
T ss_dssp             HHHHHHHHHCCSSGGGCCTTSHHHHHCCBTTBCCEEECSSHHHHHHHHHHHCCGGGSC
T ss_pred             HHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCHHHCC
T ss_conf             6999887717998020589626776434446767775899899999999708967602


No 10 
>d1s57a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Thale cress (Arabidopsis thaliana), chloroplast NDK2 [TaxId: 3702]}
Probab=100.00  E-value=0  Score=357.23  Aligned_cols=138  Identities=34%  Similarity=0.650  Sum_probs=136.0

Q ss_pred             CCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCC
Q ss_conf             63102304552377189879999999725558921001126999999998885147421001221001115771111640
Q gi|254780390|r    2 VIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEE   81 (140)
Q Consensus         2 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~n   81 (140)
                      .||+||+|||||||+++++|+|+++|+++||.|+++|++++|+++|++||.+|++||||++|++||+||||+||+|+|+|
T Consensus         4 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~k~f~~~lv~~mtSGPv~amvl~g~n   83 (153)
T d1s57a_           4 DVEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPVVCMAWEGVG   83 (153)
T ss_dssp             CCEEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGTTSSSHHHHHHHHTSSCEEEEEEEETT
T ss_pred             HHHEEEEEECHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             21242789890354057899999999987998999872417799999999998030467778754067876664313630


Q ss_pred             HHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf             1789996618899777689970001011522100440699899999998726856506
Q gi|254780390|r   82 AISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII  139 (140)
Q Consensus        82 aV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      ||+.||+++|||||.+|+|+||||+||.+.++|+||||||+++|+||++||||++||+
T Consensus        84 av~~~r~l~Gpt~p~~A~p~tiR~~yg~~~~~N~vHgSds~esA~rEi~~fFp~~ei~  141 (153)
T d1s57a_          84 VVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGLWFKEGELC  141 (153)
T ss_dssp             HHHHHHHHHCCSSTTTSCTTSHHHHHCCBTTBCCEEECSSHHHHHHHHHHHSCTTCCC
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCHHHHEEECCCCEEECCCCHHHHHHHHHHCCCHHHCC
T ss_conf             5656777506898020489982034314246712677899899999999716943400


No 11 
>d1u8wa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=100.00  E-value=0  Score=356.52  Aligned_cols=136  Identities=38%  Similarity=0.700  Sum_probs=133.9

Q ss_pred             CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH
Q ss_conf             31023045523771898799999997255589210011269999999988851474210012210011157711116401
Q gi|254780390|r    3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA   82 (140)
Q Consensus         3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na   82 (140)
                      |||||+|||||||+++++|+|+++|+++||+|+++|++++|+++|++||.+|+|||||+.|++||+||||+||+|+|+||
T Consensus         1 ~E~Tl~iIKPDav~~~~~geIi~~i~~~Gf~I~~~k~~~ls~e~a~~~Y~~~~gk~ff~~lv~~m~sGPv~a~~l~g~~a   80 (149)
T d1u8wa_           1 MEQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNV   80 (149)
T ss_dssp             CCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTCTTSSSTTHHHHHHHHTSSCEEEEEEESTTH
T ss_pred             CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCHH
T ss_conf             95358998920653468899999999859979675504088999999999870332243256540578743200026429


Q ss_pred             HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHC
Q ss_conf             78999661889977768997000101152210044069989999999872685650
Q gi|254780390|r   83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEI  138 (140)
Q Consensus        83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei  138 (140)
                      |++||+++|||||++|.|+||||+||.+.++|++|||||+++|+||++||||+++|
T Consensus        81 V~~~R~l~Gptdp~~A~p~tIR~~fg~~~~~N~vH~Sds~e~A~rEi~~fFp~~~i  136 (149)
T d1u8wa_          81 VLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVESARKEIALWFPDGPV  136 (149)
T ss_dssp             HHHHHHHHCCSSTTTCCTTSHHHHHCCSTTSCSEEECSSHHHHHHHHHHHCTTCCC
T ss_pred             HHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCEECCCCHHHHHHHHHHCCCCCCC
T ss_conf             99999870468813279975000103664534067789989999999970891014


No 12 
>d1nb2a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Bacillus halodenitrificans [TaxId: 1482]}
Probab=100.00  E-value=0  Score=355.06  Aligned_cols=137  Identities=42%  Similarity=0.689  Sum_probs=135.0

Q ss_pred             CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH
Q ss_conf             31023045523771898799999997255589210011269999999988851474210012210011157711116401
Q gi|254780390|r    3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA   82 (140)
Q Consensus         3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na   82 (140)
                      -||||+|||||||+++++|+|+++|+++||.|+++|++++|+++|++||.+|+++|||+.|+.||+||||+||+|+|+||
T Consensus         1 kErTl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~~~ff~~lv~~mtsgP~~a~vl~g~na   80 (149)
T d1nb2a_           1 KERTFLMVKPDGVQRNLVGEVVKRFESKGLKLAGAKLMVISKDGAAAHYAELGGGPFFGGLVGGATSGPVFAMVWEGLNA   80 (149)
T ss_dssp             CCCEEEEECHHHHHTTCHHHHHHHHHTTTCEEEEEECCCCTTHHHHHHTCTTSSSTTHHHHHHHHTSSCCBEEEEESTTH
T ss_pred             CCEEEEEECCCHHCCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHCCCCEECCHHHHCCCCCEEEEEEECCHH
T ss_conf             94699998913430478999999999879989997767358999999999870674033145523037548988604026


Q ss_pred             HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf             789996618899777689970001011522100440699899999998726856506
Q gi|254780390|r   83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII  139 (140)
Q Consensus        83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      |.+||+|+|||||.+|+|+||||+||++.++|+||||||+++|+||++||||++|++
T Consensus        81 V~~~R~l~Gptdp~~A~p~siR~~yg~~~~~N~vH~Sds~e~A~rEi~~fF~~~e~~  137 (149)
T d1nb2a_          81 AATARQILGATNPSDAAPGTIRGDFGVSAGRNAIHGSDSAGSAAKEIGAFFGGGEAA  137 (149)
T ss_dssp             HHHHHHHHCCSSTTSSCTTSHHHHSCSCSSSCSEEECSSHHHHHHHHHHHSCSSSSC
T ss_pred             HHHHHHHHCCCCHHHCCCCHHHHHHEEEECCCEEECCCCHHHHHHHHHHCCCHHHCC
T ss_conf             999999728998000485113212305200010267999899999998458922434


No 13 
>d2az3a1 d.58.6.1 (A:4-155) Nucleoside diphosphate kinase, NDK {Archaeon Halobacterium salinarum [TaxId: 2242]}
Probab=100.00  E-value=0  Score=351.94  Aligned_cols=138  Identities=44%  Similarity=0.748  Sum_probs=134.7

Q ss_pred             CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH
Q ss_conf             31023045523771898799999997255589210011269999999988851474210012210011157711116401
Q gi|254780390|r    3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA   82 (140)
Q Consensus         3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na   82 (140)
                      -||||+|||||||+++++|+|+++|+++||+|+++|++++|+++|++||.+|+++|||+.|++||+||||+||+|+|+||
T Consensus         2 ~ErTl~iIKPDav~~~~~geIi~~ie~~Gf~Iv~~k~~~ls~e~a~~~Y~~~~~k~ff~~lv~~m~sGpvvalvl~g~~a   81 (152)
T d2az3a1           2 DERTFVMVKPDGVQRGLIGDIVTRLETKGLKMVGGKFMRIDEELAHEHYAEHEDKPFFDGLVSFITSGPVFAMVWEGADA   81 (152)
T ss_dssp             CCEEEEEECHHHHHTTCHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEESTTH
T ss_pred             CCEEEEEECCCHHCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEEEECCCH
T ss_conf             83699998945320577899999999869989985664279999999898716875411210004668889999715788


Q ss_pred             HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHH--HHHHHHHCCHHHCCC
Q ss_conf             7899966188997776899700010115221004406998999--999987268565069
Q gi|254780390|r   83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTA--LEEISYWFARNEIIG  140 (140)
Q Consensus        83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a--~rEi~~fF~~~ei~g  140 (140)
                      |.+||+++|||||++|+|+||||+||.+.++|+||||||+++|  +|||+||||++||+.
T Consensus        82 v~~~R~l~Gpt~p~~a~p~siR~~fg~~~~~N~vH~SDs~e~A~~erEi~~fF~~~ei~~  141 (152)
T d2az3a1          82 TRQVRQLMGATDAQDAAPGTIRGDYGNDLGHNLIHGSDHEDEGANEREIALFFDDDELVD  141 (152)
T ss_dssp             HHHHHHHHCCSSGGGSCTTSHHHHHCCCSSSCSEEECCTTSTTHHHHHHHHHCCTTSSCC
T ss_pred             HHHHHHHHCCCCHHHCCCCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHCCCHHHCCC
T ss_conf             999999848898322399873440478705860788899466323506653218146001


No 14 
>d2dyaa1 d.58.6.1 (A:6-158) Nucleoside diphosphate kinase, NDK {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=100.00  E-value=0  Score=344.35  Aligned_cols=137  Identities=42%  Similarity=0.712  Sum_probs=133.2

Q ss_pred             CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH
Q ss_conf             31023045523771898799999997255589210011269999999988851474210012210011157711116401
Q gi|254780390|r    3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA   82 (140)
Q Consensus         3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na   82 (140)
                      .||||+|||||||+++++|+|+++|+++||.|+++|++++|+++|++||.+|+|+|||++|++||+||||+||+|+|+||
T Consensus         2 ~ErTlaiIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~~~f~~~lv~~m~sGp~~alvl~~~na   81 (153)
T d2dyaa1           2 TERTLVIIKPDAVVRGLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKALIDYITKTPVVVMVLEGRYA   81 (153)
T ss_dssp             EEEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEEEETH
T ss_pred             CEEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCCCH
T ss_conf             51699998941440478999999999879989888756268999999999982141047788887533202453135577


Q ss_pred             HHHHHHHCCCCCHHHCCCCCCCHHCCCC---HHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf             7899966188997776899700010115---22100440699899999998726856506
Q gi|254780390|r   83 ISKNREVMGDTDPKKALKGTIRNKYGIS---IGENSIHGSDSLKTALEEISYWFARNEII  139 (140)
Q Consensus        83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~---~~~N~vH~Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      |..||+|+|||||.+|+|+|||++||.+   ..+|++|||||+++|+|||+||||++||+
T Consensus        82 v~~~r~l~Gptdp~~A~p~tiR~~fg~~~~d~~~N~vHgSds~e~A~rEi~~fF~~~ei~  141 (153)
T d2dyaa1          82 VEVVRKMAGATDPKDAAPGTIRGDFGLEVSDAICNVIHASDSKESAEREISLFFKPEELF  141 (153)
T ss_dssp             HHHHHHHHCCSSGGGSCTTSHHHHHCCCCSSSCCCSEEECSSHHHHHHHHHHHCCGGGCC
T ss_pred             HHHHHHHHCCCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHC
T ss_conf             889888857899667699984114313355245676327899899999999718913513


No 15 
>d1k44a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=0  Score=341.35  Aligned_cols=134  Identities=37%  Similarity=0.677  Sum_probs=130.5

Q ss_pred             CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH
Q ss_conf             31023045523771898799999997255589210011269999999988851474210012210011157711116401
Q gi|254780390|r    3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA   82 (140)
Q Consensus         3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na   82 (140)
                      .|+||+||||||++++++|+|+++|+++||.|+++|++++|+++|++||.+|+++|||++|++||+||||++|+|+|+||
T Consensus         1 tE~Tl~iIKPdav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~~~ff~~lv~~m~SGp~~~l~l~g~na   80 (135)
T d1k44a_           1 TERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRA   80 (135)
T ss_dssp             CEEEEEEECHHHHHTTCHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHTTTSCEEEEEEEETTH
T ss_pred             CCEEEEEECCCHHCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEECCCCCCH
T ss_conf             94479998911430588999999999859999998720379999999899986163313321010246714531568428


Q ss_pred             HHHHHHHCCCCCHHHC-CCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHH
Q ss_conf             7899966188997776-89970001011522100440699899999998726856
Q gi|254780390|r   83 ISKNREVMGDTDPKKA-LKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARN  136 (140)
Q Consensus        83 V~~~R~l~Gptdp~~a-~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~  136 (140)
                      |.+||+++|||||.+| +|+||||+||.+.++|+||||||+++|+||++||||+.
T Consensus        81 v~~~r~l~Gptdp~~a~~p~siR~~yg~~~~~N~vHgSds~~~A~rEi~~fFp~~  135 (135)
T d1k44a_          81 IAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFPGA  135 (135)
T ss_dssp             HHHHHHHHCCSSTTTTSCTTSHHHHHCCCSTTCCEEECSSHHHHHHHHHHHSSCC
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCCC
T ss_conf             9999998489992000699983798658756508678899999999999748999


No 16 
>d2b8qa1 d.58.6.1 (A:2-129) Nucleoside diphosphate kinase, NDK {Mimivirus [TaxId: 315393]}
Probab=100.00  E-value=0  Score=317.32  Aligned_cols=127  Identities=38%  Similarity=0.624  Sum_probs=122.9

Q ss_pred             CEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCC-CCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH
Q ss_conf             10230455237718987999999972555892100112-69999999988851474210012210011157711116401
Q gi|254780390|r    4 EKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCW-MNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA   82 (140)
Q Consensus         4 e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~-ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na   82 (140)
                      ||||+|||||||+++++|+|+++|+++||.|+++|++. .++++|++||.+|++||||+.|++||+||||+||+|+|+||
T Consensus         1 QrTl~iIKPdav~~~~~geIi~~i~~~Gf~Iv~~k~~~~~~~~~a~~~y~~~~~k~f~~~lv~~m~sGpv~al~l~g~na   80 (128)
T d2b8qa1           1 QRTLVLIKPDAFERSLVAEIMGRIEKKNFKIVSMKFWSKAPRNLIEQHYKEHSEQSYFNDNCDFMVSGPIISIVYEGTDA   80 (128)
T ss_dssp             EEEEEEECHHHHHTTCHHHHHHHHHHTTCEEEEEEEESSCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEEEETH
T ss_pred             CEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHCCCCCCEEEEEEECCCH
T ss_conf             91799989045414789999999998799884014543657999998645642451001303227778888763004436


Q ss_pred             HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCC
Q ss_conf             7899966188997776899700010115221004406998999999987268
Q gi|254780390|r   83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFA  134 (140)
Q Consensus        83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~  134 (140)
                      |.+||+|+|||    +.|+||||+||.+.++|++|||||+++|+||++||||
T Consensus        81 V~~~R~l~G~~----~~p~siR~~fg~~~~~N~vH~Sds~~~A~~Ei~~fFP  128 (128)
T d2b8qa1          81 ISKIRRLQGNI----LTPGTIRGDLANDIRENLIHASDSEDSAVDEISIWFP  128 (128)
T ss_dssp             HHHHHHHHCCT----TCTTSHHHHHCCCSSCCSEEECCSHHHHHHHHHHHCC
T ss_pred             HHHHHHHCCCC----CCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCC
T ss_conf             88997740455----7997967886477665496888999999999972297


Done!