Query gi|254780390|ref|YP_003064803.1| nucleoside diphosphate kinase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 140 No_of_seqs 116 out of 2106 Neff 6.2 Searched_HMMs 13730 Date Wed Jun 1 03:27:40 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780390.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1ehwa_ d.58.6.1 (A:) Nucleosi 100.0 0 0 359.8 12.7 139 1-139 2-141 (143) 2 d1nhkl_ d.58.6.1 (L:) Nucleosi 100.0 0 0 358.3 12.1 138 2-139 1-138 (143) 3 d1w7wa_ d.58.6.1 (A:) Nucleosi 100.0 0 0 357.2 13.1 139 2-140 2-140 (151) 4 d1hlwa_ d.58.6.1 (A:) Nucleosi 100.0 0 0 357.2 12.6 139 1-139 1-139 (150) 5 d1zs6a1 d.58.6.1 (A:18-169) Nu 100.0 0 0 357.1 12.5 139 1-139 2-140 (152) 6 d1xqia1 d.58.6.1 (A:14-195) Nu 100.0 0 0 360.0 9.7 138 2-139 1-181 (182) 7 d1xiqa_ d.58.6.1 (A:) Nucleosi 100.0 0 0 356.4 12.5 137 3-139 1-137 (149) 8 d1wkja1 d.58.6.1 (A:1-137) Nuc 100.0 0 0 356.8 11.9 137 3-139 1-137 (137) 9 d3bbba1 d.58.6.1 (A:2-151) Nuc 100.0 0 0 355.9 12.5 138 2-139 2-139 (150) 10 d1s57a_ d.58.6.1 (A:) Nucleosi 100.0 0 0 357.2 11.2 138 2-139 4-141 (153) 11 d1u8wa_ d.58.6.1 (A:) Nucleosi 100.0 0 0 356.5 10.4 136 3-138 1-136 (149) 12 d1nb2a_ d.58.6.1 (A:) Nucleosi 100.0 0 0 355.1 9.4 137 3-139 1-137 (149) 13 d2az3a1 d.58.6.1 (A:4-155) Nuc 100.0 0 0 351.9 9.9 138 3-140 2-141 (152) 14 d2dyaa1 d.58.6.1 (A:6-158) Nuc 100.0 0 0 344.3 11.7 137 3-139 2-141 (153) 15 d1k44a_ d.58.6.1 (A:) Nucleosi 100.0 0 0 341.4 11.5 134 3-136 1-135 (135) 16 d2b8qa1 d.58.6.1 (A:2-129) Nuc 100.0 0 0 317.3 11.3 127 4-134 1-128 (128) No 1 >d1ehwa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Human (Homo sapiens), NDK4 [TaxId: 9606]} Probab=100.00 E-value=0 Score=359.79 Aligned_cols=139 Identities=35% Similarity=0.643 Sum_probs=136.4 Q ss_pred CC-CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCC Q ss_conf 96-31023045523771898799999997255589210011269999999988851474210012210011157711116 Q gi|254780390|r 1 MV-IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKG 79 (140) Q Consensus 1 m~-~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g 79 (140) |+ .||||+||||||++++++|+|+++|+++||.|+++|++++|+++|++||.+|++||||++|++||+||||+||+|+| T Consensus 2 m~~~E~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~Iv~~k~~~lt~e~a~~~Y~~~~~k~f~~~lv~~m~sGp~~a~~l~g 81 (143) T d1ehwa_ 2 MGTRERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEG 81 (143) T ss_dssp CGGGCEEEEEECHHHHHTTCHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEES T ss_pred CCCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHEECCCCEEEEECCH T ss_conf 87611699999934650378999999999859989660555169999999999983232455455100478887775230 Q ss_pred CCHHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC Q ss_conf 401789996618899777689970001011522100440699899999998726856506 Q gi|254780390|r 80 EEAISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII 139 (140) Q Consensus 80 ~naV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~ 139 (140) +|||..||+++|||||.+|+|+||||+||++.++|+||||||+++|+||++||||++||+ T Consensus 82 ~naV~~~R~l~Gpt~p~~a~p~siR~~yg~~~~~N~vH~Sds~e~A~~Ei~~fF~~~ei~ 141 (143) T d1ehwa_ 82 YNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLWFQSSELV 141 (143) T ss_dssp TTHHHHHHHHHCCSSGGGSCTTSHHHHHCCCSSCCSEEECSSHHHHHHHHHHHCCGGGCC T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCEECCCCHHHHHHHHHHHCCHHHCC T ss_conf 237899998756898353899980766527435788577899999999999719933324 No 2 >d1nhkl_ d.58.6.1 (L:) Nucleoside diphosphate kinase, NDK {Myxococcus xanthus [TaxId: 34]} Probab=100.00 E-value=0 Score=358.30 Aligned_cols=138 Identities=50% Similarity=0.851 Sum_probs=136.4 Q ss_pred CCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCC Q ss_conf 63102304552377189879999999725558921001126999999998885147421001221001115771111640 Q gi|254780390|r 2 VIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEE 81 (140) Q Consensus 2 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~n 81 (140) +||+||+||||||++++++|+|+++|+++||+|+++|++++|+++|++||++|+++|||+.|++||+||||+||+|+|+| T Consensus 1 a~E~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~~~ff~~lv~~mtSgpvva~vl~g~~ 80 (143) T d1nhkl_ 1 AIERTLSIIKPDGLEKGVIGKIISRFEEKGLKPVAIRLQHLSQAQAEGFYAVHKARPFFKDLVQFMISGPVVLMVLEGEN 80 (143) T ss_dssp CEEEEEEEECHHHHHTTCHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEEEET T ss_pred CCHHEEEEECHHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEECC T ss_conf 91361898890153257799999999986999999988608899999887764221018888742477987999998354 Q ss_pred HHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC Q ss_conf 1789996618899777689970001011522100440699899999998726856506 Q gi|254780390|r 82 AISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII 139 (140) Q Consensus 82 aV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~ 139 (140) ||.+||+++|||||.+|+|+||||+||.+.++|++|||||+++|+||++||||++||. T Consensus 81 av~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~A~rEi~~fF~~~ei~ 138 (143) T d1nhkl_ 81 AVLANRDIMGATNPAQAAEGTIRKDFATSIDKNTVHGSDSLENAKIEIAYFFRETEIH 138 (143) T ss_dssp HHHHHHHHHCCSSGGGCCTTSHHHHHCCSSSSCSEEECSSHHHHHHHHHHHCCGGGCC T ss_pred HHHHHHHHHCCCCHHHCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCHHHCC T ss_conf 5889987605899556136554766056667678488999899999999729987763 No 3 >d1w7wa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Pea (Pisum sativum) [TaxId: 3888]} Probab=100.00 E-value=0 Score=357.16 Aligned_cols=139 Identities=40% Similarity=0.682 Sum_probs=136.7 Q ss_pred CCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCC Q ss_conf 63102304552377189879999999725558921001126999999998885147421001221001115771111640 Q gi|254780390|r 2 VIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEE 81 (140) Q Consensus 2 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~n 81 (140) .||+||+||||||++++++|+|+++|+++||+|+++|++++|+++|++||.+|++||||++|++||+||||++|+|+|+| T Consensus 2 ~~E~Tl~iIKPdav~~~~~g~Ii~~i~~~Gf~Iv~~k~~~lt~e~a~~~Y~~~~~k~ff~~lv~~mtsGpv~al~l~g~n 81 (151) T d1w7wa_ 2 ELERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVLIPTKQFAQQHYHDLKERPFFNGLCDFLSSGPVIAMVWEGEG 81 (151) T ss_dssp TTCEEEEEECHHHHHTTCHHHHHHHHHTTTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEESTT T ss_pred CCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEEECCCH T ss_conf 71137899990043037899999999987998999887735899999999999736654521442157887667631302 Q ss_pred HHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCCC Q ss_conf 17899966188997776899700010115221004406998999999987268565069 Q gi|254780390|r 82 AISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEIIG 140 (140) Q Consensus 82 aV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~g 140 (140) ||..||+++|||||.+|+|+||||+||++.++|++|||||+++|+||++||||++||+- T Consensus 82 aV~~~r~l~Gptdp~~a~p~siR~~fg~~~~~N~vH~Sds~e~A~~Ei~~fF~~~ei~~ 140 (151) T d1w7wa_ 82 VITYGRKLIGATDPQKSAPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELVS 140 (151) T ss_dssp HHHHHHHHHCCSSGGGSCTTSHHHHHCCSGGGCCEEECCSHHHHHHHHHHHCCGGGCCC T ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCHHHHHHHHHHCCCHHHCEE T ss_conf 67889987413880226997245764656677602678998999999997249204041 No 4 >d1hlwa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Dictyostelium discoideum [TaxId: 44689]} Probab=100.00 E-value=0 Score=357.25 Aligned_cols=139 Identities=38% Similarity=0.682 Sum_probs=137.3 Q ss_pred CCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCC Q ss_conf 96310230455237718987999999972555892100112699999999888514742100122100111577111164 Q gi|254780390|r 1 MVIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGE 80 (140) Q Consensus 1 m~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~ 80 (140) |..||||+|||||||+++++|+|+++|+++||.|+++|++++|+++|++||.+|+|+|||+.|+.||+||||+||+|+|+ T Consensus 1 ~~~E~Tl~iIKPDav~~~l~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~k~f~~~lv~~m~sGp~vam~l~g~ 80 (150) T d1hlwa_ 1 VNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGK 80 (150) T ss_dssp CTTCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEEST T ss_pred CCCCEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECC T ss_conf 97444899989224303789999999998799997756255789999999874058733133113102587556775046 Q ss_pred CHHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC Q ss_conf 01789996618899777689970001011522100440699899999998726856506 Q gi|254780390|r 81 EAISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII 139 (140) Q Consensus 81 naV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~ 139 (140) |||.+||+|+|||||.+++|+||||+||.+.++|++|||||+++|+||++||||++|++ T Consensus 81 naV~~~R~l~Gptdp~~~~p~tiR~~yg~~~~~N~vH~SDs~e~A~~Ei~~fF~~~ei~ 139 (150) T d1hlwa_ 81 GVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIAGSDSVESANREIALWFKPEELL 139 (150) T ss_dssp THHHHHHHHHCCSSGGGSCTTSHHHHHCCBTTBCCEEECSSHHHHHHHHHHHCCGGGSC T ss_pred CHHHHHHHHHCCCCCCCCCCHHHHHHHEECCCCEEEECCCCHHHHHHHHHHCCCHHHCC T ss_conf 67889988626888132684024444322156612677899899999999717967633 No 5 >d1zs6a1 d.58.6.1 (A:18-169) Nucleoside diphosphate kinase, NDK {Human(Homo sapiens), NDK3 [TaxId: 9606]} Probab=100.00 E-value=0 Score=357.06 Aligned_cols=139 Identities=39% Similarity=0.697 Sum_probs=136.7 Q ss_pred CCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCC Q ss_conf 96310230455237718987999999972555892100112699999999888514742100122100111577111164 Q gi|254780390|r 1 MVIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGE 80 (140) Q Consensus 1 m~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~ 80 (140) ++.||||+||||||++++++|+|+++|+++||+|+++|++++|+++|++||.+|+++|||+.|++||+||||++|+|+|+ T Consensus 2 ~~~ErTl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~k~f~~~Lv~~m~sGpvva~~l~g~ 81 (152) T d1zs6a1 2 GAHERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRLVKYMASGPVVAMVWQGL 81 (152) T ss_dssp GGGCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEEST T ss_pred CCCEEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCH T ss_conf 97506999989324314789999999998699899976440789999998888605421778874147898888733422 Q ss_pred CHHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC Q ss_conf 01789996618899777689970001011522100440699899999998726856506 Q gi|254780390|r 81 EAISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII 139 (140) Q Consensus 81 naV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~ 139 (140) |||+.||+++|||||.+|+|+||||+||.+.++|+||||||+++|+||++||||++|++ T Consensus 82 nav~~~R~l~Gptdp~~A~p~siR~~fg~~~~~N~vH~Sds~e~A~rEi~~fF~~~e~~ 140 (152) T d1zs6a1 82 DVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVESARREIALWFRADELL 140 (152) T ss_dssp THHHHHHHHHCCSSGGGSCTTSHHHHHCCSGGGCSEEECSSHHHHHHHHHHHSCGGGSC T ss_pred HHHHHHHHHCCCCCHHCCCCHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHCCHHHCC T ss_conf 58998897708998000672345454343266774478899999999999727944604 No 6 >d1xqia1 d.58.6.1 (A:14-195) Nucleoside diphosphate kinase, NDK {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Probab=100.00 E-value=0 Score=359.99 Aligned_cols=138 Identities=38% Similarity=0.598 Sum_probs=133.6 Q ss_pred CCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHC-------------------------- Q ss_conf 631023045523771898799999997255589210011269999999988851-------------------------- Q gi|254780390|r 2 VIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHK-------------------------- 55 (140) Q Consensus 2 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~-------------------------- 55 (140) .+||||+|||||||+++++|+||++|+++||+|+++|++++|+++|++||.+|+ T Consensus 1 p~ErTl~iIKPDav~~~lvg~Ii~~ie~~Gf~Iva~k~~~lt~e~a~~fY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (182) T d1xqia1 1 PVEKTLLILKPDAVARGLVDEIISRFKKAGLKIVALKMVKASPEEIERFYPSSEEWLQSAGQKLLKAYQELGIDPRAKIG 80 (182) T ss_dssp CCCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCCHHHHHS T ss_pred CCCEEEEEECCCHHCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC T ss_conf 97547999894054148899999999987998999760048999999999998887653002455566653024100012 Q ss_pred -------CCCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCHHHCCCCCCCHHCCCCH----------HHEEEEE Q ss_conf -------47421001221001115771111640178999661889977768997000101152----------2100440 Q gi|254780390|r 56 -------DRPFFPELVQAMISGPVFLQVLKGEEAISKNREVMGDTDPKKALKGTIRNKYGISI----------GENSIHG 118 (140) Q Consensus 56 -------~k~ff~~lv~~m~sGpv~alvl~g~naV~~~R~l~Gptdp~~a~p~tiR~~fg~~~----------~~N~vH~ 118 (140) |||||++|++|||||||+||+|+|+|||++||+|+|||||++|+|+||||+||.|. .+|+||| T Consensus 81 ~~~~~~~gk~f~~~Lv~~mtSgPvva~vleg~~aV~~~R~l~GptdP~~A~pgtIR~~fg~d~~~~~~~~~~~~rN~vH~ 160 (182) T d1xqia1 81 TDDPVEVGRIIKRNLVKYMTSGPNVVMVLKGNRAVEIVRKLVGPTSPHSAPPGTIRGDYSIDSPDLAAEEGRVVFNLVHA 160 (182) T ss_dssp CCCHHHHHHHHHHHHHHHHTSSCEEEEEEESTTHHHHHHHHHCCSCGGGSCTTSHHHHHCCCCHHHHHHTTSCCCCSEEE T ss_pred CCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEC T ss_conf 33310147752688999980686578985266799999998279994658999607763767410001236665420588 Q ss_pred CCCHHHHHHHHHHHCCHHHCC Q ss_conf 699899999998726856506 Q gi|254780390|r 119 SDSLKTALEEISYWFARNEII 139 (140) Q Consensus 119 Sds~e~a~rEi~~fF~~~ei~ 139 (140) |||+++|+|||++|||++||+ T Consensus 161 SDs~e~A~rEi~~fF~~~ei~ 181 (182) T d1xqia1 161 SDSPSEAEREIRFWFREEEVL 181 (182) T ss_dssp CSSHHHHHHHHHHHCCGGGSC T ss_pred CCCHHHHHHHHHHCCCHHHCC T ss_conf 899999999999648934216 No 7 >d1xiqa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Probab=100.00 E-value=0 Score=356.43 Aligned_cols=137 Identities=37% Similarity=0.684 Sum_probs=135.5 Q ss_pred CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH Q ss_conf 31023045523771898799999997255589210011269999999988851474210012210011157711116401 Q gi|254780390|r 3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA 82 (140) Q Consensus 3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na 82 (140) |||||+||||||++++++|+|+++|+++||+|+++|++++|+++|++||++|+|+|||++|++||+||||++|+|+|+|| T Consensus 1 ~e~Tl~iIKPdav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~k~ff~~lv~~mtsGp~v~~~l~~~na 80 (149) T d1xiqa_ 1 MEKSFIMIKPDGVQRGLVGTIIKRFEKKGYKLIAIKMLNPTEEILKEHYKELSDQPFFKNLVAYISKGPVVAMVWEGVDM 80 (149) T ss_dssp CCEEEEEECHHHHHTTCHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHTGGGSSSSSCTTHHHHHTTSCEEEEEEESTTH T ss_pred CCEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCCHH T ss_conf 95359999900541578899999999879989999864178999999999873152100145410167779998423126 Q ss_pred HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC Q ss_conf 789996618899777689970001011522100440699899999998726856506 Q gi|254780390|r 83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII 139 (140) Q Consensus 83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~ 139 (140) |..||+++|||||.+|+|+||||+||.+.++|++|||||+++|+||++||||++||+ T Consensus 81 v~~~R~l~Gptdp~~a~~~siR~~fg~~~~~N~vHgSds~e~A~rEi~~fF~~~ei~ 137 (149) T d1xiqa_ 81 VKQGRKLIGETNPLTSNTGTIRGDFCLEVSKNVIHGSDSVASANKEINIWFKAEELT 137 (149) T ss_dssp HHHHHHHHCCSSTTTSCTTSHHHHHCCBTTBCSEEECSSHHHHHHHHHHHCCGGGSC T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCHHHHHHHHHHCCCHHHCC T ss_conf 677887626898133899983533303236606688899999999999707902324 No 8 >d1wkja1 d.58.6.1 (A:1-137) Nucleoside diphosphate kinase, NDK {Thermus thermophilus [TaxId: 274]} Probab=100.00 E-value=0 Score=356.82 Aligned_cols=137 Identities=43% Similarity=0.769 Sum_probs=135.7 Q ss_pred CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH Q ss_conf 31023045523771898799999997255589210011269999999988851474210012210011157711116401 Q gi|254780390|r 3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA 82 (140) Q Consensus 3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na 82 (140) ||+||+||||||++++++|+|+++|+++||+|+++|++++|+++|++||.+|+++|||++|++||+||||++|+|+|+|| T Consensus 1 ~E~Tl~iIKPdav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~k~f~~~lv~~m~SGp~~~l~l~g~na 80 (137) T d1wkja1 1 MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGV 80 (137) T ss_dssp CCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGSSSSSHHHHHHHHTSSCEEEEEEESTTH T ss_pred CCEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEECCH T ss_conf 95569998930541478999999999879999997721488899976559986022236400131369998999970410 Q ss_pred HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC Q ss_conf 789996618899777689970001011522100440699899999998726856506 Q gi|254780390|r 83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII 139 (140) Q Consensus 83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~ 139 (140) |.+||+++|||||.+|+|+||||+||++.++|+||||||+++|+||++||||++||+ T Consensus 81 v~~~r~l~Gpt~p~~a~p~siR~~yg~~~~~N~vH~Sds~e~A~rEi~~fF~~~ei~ 137 (137) T d1wkja1 81 VAEVRKMMGATHPKDALPGTIRGDFATTIDENVIHGSATLEDAQREIALFFRPEELL 137 (137) T ss_dssp HHHHHHHHCCSSTTTCCTTSHHHHHCCCSTTCSEEECSSHHHHHHHHHHHSCGGGCC T ss_pred HHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCHHHCC T ss_conf 434654105699476999875887146667788467899999999999608923139 No 9 >d3bbba1 d.58.6.1 (A:2-151) Nucleoside diphosphate kinase, NDK {Human (Homo sapiens) [TaxId: 9606]} Probab=100.00 E-value=0 Score=355.93 Aligned_cols=138 Identities=44% Similarity=0.772 Sum_probs=136.2 Q ss_pred CCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCC Q ss_conf 63102304552377189879999999725558921001126999999998885147421001221001115771111640 Q gi|254780390|r 2 VIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEE 81 (140) Q Consensus 2 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~n 81 (140) .|||||+||||||++++++|+|+++|+++||+|+++|++++|+++|++||++|+|||||+.|++||+||||++|+|+|+| T Consensus 2 ~~e~Tl~lIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~k~ff~~lv~~m~sgPv~al~l~g~n 81 (150) T d3bbba1 2 NLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLN 81 (150) T ss_dssp TTCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEESTT T ss_pred CHHEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHEEECCCCEEEEEECCCC T ss_conf 70006999890465157889999999987998999873317899999988998613334311100127887455533668 Q ss_pred HHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC Q ss_conf 1789996618899777689970001011522100440699899999998726856506 Q gi|254780390|r 82 AISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII 139 (140) Q Consensus 82 aV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~ 139 (140) ||..||+++|||||.+|+|+||||+||++.++|++|||||+++|+||+++|||++||+ T Consensus 82 aV~~~R~l~Gpt~p~~a~p~tiR~~fg~~~~~N~vH~Sds~e~A~rEi~~fF~~~ei~ 139 (150) T d3bbba1 82 VVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELV 139 (150) T ss_dssp HHHHHHHHHCCSSGGGCCTTSHHHHHCCBTTBCCEEECSSHHHHHHHHHHHCCGGGSC T ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCHHHCC T ss_conf 6999887717998020589626776434446767775899899999999708967602 No 10 >d1s57a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Thale cress (Arabidopsis thaliana), chloroplast NDK2 [TaxId: 3702]} Probab=100.00 E-value=0 Score=357.23 Aligned_cols=138 Identities=34% Similarity=0.650 Sum_probs=136.0 Q ss_pred CCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCC Q ss_conf 63102304552377189879999999725558921001126999999998885147421001221001115771111640 Q gi|254780390|r 2 VIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEE 81 (140) Q Consensus 2 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~n 81 (140) .||+||+|||||||+++++|+|+++|+++||.|+++|++++|+++|++||.+|++||||++|++||+||||+||+|+|+| T Consensus 4 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~k~f~~~lv~~mtSGPv~amvl~g~n 83 (153) T d1s57a_ 4 DVEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPVVCMAWEGVG 83 (153) T ss_dssp CCEEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGTTSSSHHHHHHHHTSSCEEEEEEEETT T ss_pred HHHEEEEEECHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCC T ss_conf 21242789890354057899999999987998999872417799999999998030467778754067876664313630 Q ss_pred HHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC Q ss_conf 1789996618899777689970001011522100440699899999998726856506 Q gi|254780390|r 82 AISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII 139 (140) Q Consensus 82 aV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~ 139 (140) ||+.||+++|||||.+|+|+||||+||.+.++|+||||||+++|+||++||||++||+ T Consensus 84 av~~~r~l~Gpt~p~~A~p~tiR~~yg~~~~~N~vHgSds~esA~rEi~~fFp~~ei~ 141 (153) T d1s57a_ 84 VVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGLWFKEGELC 141 (153) T ss_dssp HHHHHHHHHCCSSTTTSCTTSHHHHHCCBTTBCCEEECSSHHHHHHHHHHHSCTTCCC T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHEEECCCCEEECCCCHHHHHHHHHHCCCHHHCC T ss_conf 5656777506898020489982034314246712677899899999999716943400 No 11 >d1u8wa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=100.00 E-value=0 Score=356.52 Aligned_cols=136 Identities=38% Similarity=0.700 Sum_probs=133.9 Q ss_pred CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH Q ss_conf 31023045523771898799999997255589210011269999999988851474210012210011157711116401 Q gi|254780390|r 3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA 82 (140) Q Consensus 3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na 82 (140) |||||+|||||||+++++|+|+++|+++||+|+++|++++|+++|++||.+|+|||||+.|++||+||||+||+|+|+|| T Consensus 1 ~E~Tl~iIKPDav~~~~~geIi~~i~~~Gf~I~~~k~~~ls~e~a~~~Y~~~~gk~ff~~lv~~m~sGPv~a~~l~g~~a 80 (149) T d1u8wa_ 1 MEQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNV 80 (149) T ss_dssp CCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTCTTSSSTTHHHHHHHHTSSCEEEEEEESTTH T ss_pred CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCHH T ss_conf 95358998920653468899999999859979675504088999999999870332243256540578743200026429 Q ss_pred HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHC Q ss_conf 78999661889977768997000101152210044069989999999872685650 Q gi|254780390|r 83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEI 138 (140) Q Consensus 83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei 138 (140) |++||+++|||||++|.|+||||+||.+.++|++|||||+++|+||++||||+++| T Consensus 81 V~~~R~l~Gptdp~~A~p~tIR~~fg~~~~~N~vH~Sds~e~A~rEi~~fFp~~~i 136 (149) T d1u8wa_ 81 VLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVESARKEIALWFPDGPV 136 (149) T ss_dssp HHHHHHHHCCSSTTTCCTTSHHHHHCCSTTSCSEEECSSHHHHHHHHHHHCTTCCC T ss_pred HHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCEECCCCHHHHHHHHHHCCCCCCC T ss_conf 99999870468813279975000103664534067789989999999970891014 No 12 >d1nb2a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Bacillus halodenitrificans [TaxId: 1482]} Probab=100.00 E-value=0 Score=355.06 Aligned_cols=137 Identities=42% Similarity=0.689 Sum_probs=135.0 Q ss_pred CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH Q ss_conf 31023045523771898799999997255589210011269999999988851474210012210011157711116401 Q gi|254780390|r 3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA 82 (140) Q Consensus 3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na 82 (140) -||||+|||||||+++++|+|+++|+++||.|+++|++++|+++|++||.+|+++|||+.|+.||+||||+||+|+|+|| T Consensus 1 kErTl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~~~ff~~lv~~mtsgP~~a~vl~g~na 80 (149) T d1nb2a_ 1 KERTFLMVKPDGVQRNLVGEVVKRFESKGLKLAGAKLMVISKDGAAAHYAELGGGPFFGGLVGGATSGPVFAMVWEGLNA 80 (149) T ss_dssp CCCEEEEECHHHHHTTCHHHHHHHHHTTTCEEEEEECCCCTTHHHHHHTCTTSSSTTHHHHHHHHTSSCCBEEEEESTTH T ss_pred CCEEEEEECCCHHCCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHCCCCEECCHHHHCCCCCEEEEEEECCHH T ss_conf 94699998913430478999999999879989997767358999999999870674033145523037548988604026 Q ss_pred HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC Q ss_conf 789996618899777689970001011522100440699899999998726856506 Q gi|254780390|r 83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII 139 (140) Q Consensus 83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~ 139 (140) |.+||+|+|||||.+|+|+||||+||++.++|+||||||+++|+||++||||++|++ T Consensus 81 V~~~R~l~Gptdp~~A~p~siR~~yg~~~~~N~vH~Sds~e~A~rEi~~fF~~~e~~ 137 (149) T d1nb2a_ 81 AATARQILGATNPSDAAPGTIRGDFGVSAGRNAIHGSDSAGSAAKEIGAFFGGGEAA 137 (149) T ss_dssp HHHHHHHHCCSSTTSSCTTSHHHHSCSCSSSCSEEECSSHHHHHHHHHHHSCSSSSC T ss_pred HHHHHHHHCCCCHHHCCCCHHHHHHEEEECCCEEECCCCHHHHHHHHHHCCCHHHCC T ss_conf 999999728998000485113212305200010267999899999998458922434 No 13 >d2az3a1 d.58.6.1 (A:4-155) Nucleoside diphosphate kinase, NDK {Archaeon Halobacterium salinarum [TaxId: 2242]} Probab=100.00 E-value=0 Score=351.94 Aligned_cols=138 Identities=44% Similarity=0.748 Sum_probs=134.7 Q ss_pred CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH Q ss_conf 31023045523771898799999997255589210011269999999988851474210012210011157711116401 Q gi|254780390|r 3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA 82 (140) Q Consensus 3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na 82 (140) -||||+|||||||+++++|+|+++|+++||+|+++|++++|+++|++||.+|+++|||+.|++||+||||+||+|+|+|| T Consensus 2 ~ErTl~iIKPDav~~~~~geIi~~ie~~Gf~Iv~~k~~~ls~e~a~~~Y~~~~~k~ff~~lv~~m~sGpvvalvl~g~~a 81 (152) T d2az3a1 2 DERTFVMVKPDGVQRGLIGDIVTRLETKGLKMVGGKFMRIDEELAHEHYAEHEDKPFFDGLVSFITSGPVFAMVWEGADA 81 (152) T ss_dssp CCEEEEEECHHHHHTTCHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEESTTH T ss_pred CCEEEEEECCCHHCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEEEECCCH T ss_conf 83699998945320577899999999869989985664279999999898716875411210004668889999715788 Q ss_pred HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHH--HHHHHHHCCHHHCCC Q ss_conf 7899966188997776899700010115221004406998999--999987268565069 Q gi|254780390|r 83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTA--LEEISYWFARNEIIG 140 (140) Q Consensus 83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a--~rEi~~fF~~~ei~g 140 (140) |.+||+++|||||++|+|+||||+||.+.++|+||||||+++| +|||+||||++||+. T Consensus 82 v~~~R~l~Gpt~p~~a~p~siR~~fg~~~~~N~vH~SDs~e~A~~erEi~~fF~~~ei~~ 141 (152) T d2az3a1 82 TRQVRQLMGATDAQDAAPGTIRGDYGNDLGHNLIHGSDHEDEGANEREIALFFDDDELVD 141 (152) T ss_dssp HHHHHHHHCCSSGGGSCTTSHHHHHCCCSSSCSEEECCTTSTTHHHHHHHHHCCTTSSCC T ss_pred HHHHHHHHCCCCHHHCCCCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHCCCHHHCCC T ss_conf 999999848898322399873440478705860788899466323506653218146001 No 14 >d2dyaa1 d.58.6.1 (A:6-158) Nucleoside diphosphate kinase, NDK {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Probab=100.00 E-value=0 Score=344.35 Aligned_cols=137 Identities=42% Similarity=0.712 Sum_probs=133.2 Q ss_pred CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH Q ss_conf 31023045523771898799999997255589210011269999999988851474210012210011157711116401 Q gi|254780390|r 3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA 82 (140) Q Consensus 3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na 82 (140) .||||+|||||||+++++|+|+++|+++||.|+++|++++|+++|++||.+|+|+|||++|++||+||||+||+|+|+|| T Consensus 2 ~ErTlaiIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~~~f~~~lv~~m~sGp~~alvl~~~na 81 (153) T d2dyaa1 2 TERTLVIIKPDAVVRGLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKALIDYITKTPVVVMVLEGRYA 81 (153) T ss_dssp EEEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEEEETH T ss_pred CEEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCCCH T ss_conf 51699998941440478999999999879989888756268999999999982141047788887533202453135577 Q ss_pred HHHHHHHCCCCCHHHCCCCCCCHHCCCC---HHHEEEEECCCHHHHHHHHHHHCCHHHCC Q ss_conf 7899966188997776899700010115---22100440699899999998726856506 Q gi|254780390|r 83 ISKNREVMGDTDPKKALKGTIRNKYGIS---IGENSIHGSDSLKTALEEISYWFARNEII 139 (140) Q Consensus 83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~---~~~N~vH~Sds~e~a~rEi~~fF~~~ei~ 139 (140) |..||+|+|||||.+|+|+|||++||.+ ..+|++|||||+++|+|||+||||++||+ T Consensus 82 v~~~r~l~Gptdp~~A~p~tiR~~fg~~~~d~~~N~vHgSds~e~A~rEi~~fF~~~ei~ 141 (153) T d2dyaa1 82 VEVVRKMAGATDPKDAAPGTIRGDFGLEVSDAICNVIHASDSKESAEREISLFFKPEELF 141 (153) T ss_dssp HHHHHHHHCCSSGGGSCTTSHHHHHCCCCSSSCCCSEEECSSHHHHHHHHHHHCCGGGCC T ss_pred HHHHHHHHCCCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHC T ss_conf 889888857899667699984114313355245676327899899999999718913513 No 15 >d1k44a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Mycobacterium tuberculosis [TaxId: 1773]} Probab=100.00 E-value=0 Score=341.35 Aligned_cols=134 Identities=37% Similarity=0.677 Sum_probs=130.5 Q ss_pred CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH Q ss_conf 31023045523771898799999997255589210011269999999988851474210012210011157711116401 Q gi|254780390|r 3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA 82 (140) Q Consensus 3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na 82 (140) .|+||+||||||++++++|+|+++|+++||.|+++|++++|+++|++||.+|+++|||++|++||+||||++|+|+|+|| T Consensus 1 tE~Tl~iIKPdav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~~~ff~~lv~~m~SGp~~~l~l~g~na 80 (135) T d1k44a_ 1 TERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRA 80 (135) T ss_dssp CEEEEEEECHHHHHTTCHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHTTTSCEEEEEEEETTH T ss_pred CCEEEEEECCCHHCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEECCCCCCH T ss_conf 94479998911430588999999999859999998720379999999899986163313321010246714531568428 Q ss_pred HHHHHHHCCCCCHHHC-CCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHH Q ss_conf 7899966188997776-89970001011522100440699899999998726856 Q gi|254780390|r 83 ISKNREVMGDTDPKKA-LKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARN 136 (140) Q Consensus 83 V~~~R~l~Gptdp~~a-~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ 136 (140) |.+||+++|||||.+| +|+||||+||.+.++|+||||||+++|+||++||||+. T Consensus 81 v~~~r~l~Gptdp~~a~~p~siR~~yg~~~~~N~vHgSds~~~A~rEi~~fFp~~ 135 (135) T d1k44a_ 81 IAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFPGA 135 (135) T ss_dssp HHHHHHHHCCSSTTTTSCTTSHHHHHCCCSTTCCEEECSSHHHHHHHHHHHSSCC T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCCC T ss_conf 9999998489992000699983798658756508678899999999999748999 No 16 >d2b8qa1 d.58.6.1 (A:2-129) Nucleoside diphosphate kinase, NDK {Mimivirus [TaxId: 315393]} Probab=100.00 E-value=0 Score=317.32 Aligned_cols=127 Identities=38% Similarity=0.624 Sum_probs=122.9 Q ss_pred CEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCC-CCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH Q ss_conf 10230455237718987999999972555892100112-69999999988851474210012210011157711116401 Q gi|254780390|r 4 EKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCW-MNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA 82 (140) Q Consensus 4 e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~-ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na 82 (140) ||||+|||||||+++++|+|+++|+++||.|+++|++. .++++|++||.+|++||||+.|++||+||||+||+|+|+|| T Consensus 1 QrTl~iIKPdav~~~~~geIi~~i~~~Gf~Iv~~k~~~~~~~~~a~~~y~~~~~k~f~~~lv~~m~sGpv~al~l~g~na 80 (128) T d2b8qa1 1 QRTLVLIKPDAFERSLVAEIMGRIEKKNFKIVSMKFWSKAPRNLIEQHYKEHSEQSYFNDNCDFMVSGPIISIVYEGTDA 80 (128) T ss_dssp EEEEEEECHHHHHTTCHHHHHHHHHHTTCEEEEEEEESSCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEEEETH T ss_pred CEEEEEECCCHHHCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHCCCCCCEEEEEEECCCH T ss_conf 91799989045414789999999998799884014543657999998645642451001303227778888763004436 Q ss_pred HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCC Q ss_conf 7899966188997776899700010115221004406998999999987268 Q gi|254780390|r 83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFA 134 (140) Q Consensus 83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~ 134 (140) |.+||+|+||| +.|+||||+||.+.++|++|||||+++|+||++|||| T Consensus 81 V~~~R~l~G~~----~~p~siR~~fg~~~~~N~vH~Sds~~~A~~Ei~~fFP 128 (128) T d2b8qa1 81 ISKIRRLQGNI----LTPGTIRGDLANDIRENLIHASDSEDSAVDEISIWFP 128 (128) T ss_dssp HHHHHHHHCCT----TCTTSHHHHHCCCSSCCSEEECCSHHHHHHHHHHHCC T ss_pred HHHHHHHCCCC----CCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCC T ss_conf 88997740455----7997967886477665496888999999999972297 Done!