HHsearch alignment of GI: 254780391 and MMDB domain: 1nkt_A_427-523_579-641
>1nkt_A (A:427-523,A:579-641) Preprotein translocase SECA 1 subunit; preprotein translocation, ATPase, transmembrane transport, helicase-like motor domain; HET: ADP; 2.60A {Mycobacterium tuberculosis}
Probab=94.38 E-value=0.14 Score=29.80 Aligned_cols=111 Identities=10% Similarity=0.022 Sum_probs=68.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC----CCCCCEEEEECCCCCCC
Q ss_conf 67489999999999997798499982998999999998521882333133224777654----44220699832866789
Q gi|254780391|r 10 KNDWEYNLLVLLQDEYEKGKRVSVQCGSERVRDSLNEYLWTWKKDGFLPHGVDVGDEGD----FSSFQPVLLTISSLNAN 85 (141)
Q Consensus 10 ~~~~~~~~~~L~~K~~~~~~ri~I~~~d~~~~~~lD~~LW~~~~~sFiPH~~~~~~~~~----~~~~~PV~i~~~~~~~~ 85 (141)
.+.....++.++.+....|.+++|+|.+.++++.|-+.|........+=|+-.....-. .-..-.|++++..-. .
T Consensus 16 ~~~k~~~~~~~i~~~~~~~~kvlIf~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~r~~~~~~f~~~~vlv~t~~~~-~ 94 (160)
T 1nkt_A 16 EEAKYIAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFTKRRIPHNVLNAKYHEQEATIIAVAGRRGGVTVATNMAG-R 94 (160)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEECSSCHHHHHHHHHTTTSTTCEEEEETTCS-T
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCC-C
T ss_conf 899999999999999964997799840198899999999876981532100104656767862789871899722335-8
Q ss_pred CCCEEEEEECC--CCCCCHHHC------C---CEEEEEECCCCHHHH
Q ss_conf 98199998168--778211311------7---579999759898999
Q gi|254780391|r 86 TSTIRFLVDEA--SMHIGDVDY------Y---EKVVFIINTDDQGSL 121 (141)
Q Consensus 86 ~~~~~~linl~--~~~p~~~~~------f---~rvieiv~~~d~~~~ 121 (141)
+-++..+|+.. .....+.++ . ..++-++...|....
T Consensus 95 Gid~~~Vi~~d~p~~~~~~~Qr~GR~~R~g~~~~~~~~~~~~~~~~~ 141 (160)
T 1nkt_A 95 GTDGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMR 141 (160)
T ss_dssp TCCSEEEEECSCCSSHHHHHHHHHTSSGGGCCEEEEEEEETTSHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEHHHCCHHHHH
T ss_conf 74773896454431488999872653468999744540231448998