RPSBLAST alignment of GI: 254780391 and SCOP domain: d1em8a_

Alignment

 Score = 84.6 bits (209), Expect = 3e-18
 Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 13/145 (8%)

Query: 1   MRTLLFYRFKNDWEYNLLV--------LLQDEYEKGKRVSVQCGSERVRDSLNEYLWTWK 52
           M+   FY   ND   + L         +  + +  GKRV + C  E+    L+E LW   
Sbjct: 1   MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60

Query: 53  KDGFLPHGVDVGDEGDFSSFQPVLLTISSLNANTSTIRFLVDEASMHIGDVDYYEKVVFI 112
            + F+PH +            PV +      +++     L+   +        + +VV  
Sbjct: 61  AESFVPHNL---AGEGPRGGAPVEIAWPQKRSSSRRD-ILISLRTSFADFATAFTEVVDF 116

Query: 113 INTDDQGSLEWGRAHWRSLKNSGYA 137
           +  +D    +  R  +++ + +G+ 
Sbjct: 117 VPYEDS-LKQLARERYKAYRVAGFN 140

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: DNA polymerase III chi subunit
superfamily: DNA polymerase III chi subunit
family: DNA polymerase III chi subunit
domain: DNA polymerase III chi subunit
species: Escherichia coli [TaxId: 562]