HHsearch alignment of GI: 254780392 and MMDB domain: 1gyt_A_165-503
>1gyt_A (A:165-503) Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli}
Probab=100.00 E-value=0 Score=959.37 Aligned_cols=328 Identities=44% Similarity=0.758 Sum_probs=316.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH-HCCC--CCHHHHCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 37899999999999999998642021254030299999999986-1133--21000011100013458988742025778
Q gi|254780392|r 161 IQQSSQVVADIQSVVKGVNLARDIINEPANVLGTDEFCKQVRKL-ESLG--VAVEILDKEAMHKLGMNALLAVAQGSSRP 237 (494)
Q Consensus 161 ~~~~~~~i~~~~aiaegv~lARDLvN~PaN~ltP~~lA~~a~~l-~~~g--l~v~Vld~~~L~klGMg~llaVgqGS~~~ 237 (494)
....++.+++++++++|+++||||+|+|||+|||++||++++++ +++| ++|+|+++++|+++|||+||+|||||.+|
T Consensus 3 ~~~~~~~~~~~~~~a~~~~~ARdL~n~P~n~ltP~~~ae~a~~~~~~~g~~v~v~Vl~~~~l~e~gmg~~laVgkgS~~p 82 (339)
T 1gyt_A 3 LTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNE 82 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCCCEEEECCCCCCC
T ss_conf 48899999999999999999985248997585210799999998752489549999237874014762020002466789
Q ss_pred CEEEEEECCCCCC-CCCCEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf 5068862057886-565126630211200663100333320023221123568999999998708787289986410266
Q gi|254780392|r 238 PYLAVMKWEGGDS-EEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAERKAKINAIGVLALVENM 316 (494)
Q Consensus 238 Prli~l~Y~g~~~-~~~piaLVGKGvTFDtGGislKp~~~M~~Mk~DM~GaAav~g~~~aia~l~~~v~v~~~~~~~EN~ 316 (494)
||||+|+|+|.+. .++||+|||||||||||||||||+.+|++||+||||||+|+|+|+++++|++|+||++++|+||||
T Consensus 83 P~li~l~Y~g~~~~~~~~i~lVGKGiTfDtGG~~lKp~~~M~~Mk~DM~GAAaVlga~~a~a~l~~~~nv~avl~l~EN~ 162 (339)
T 1gyt_A 83 SLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENM 162 (339)
T ss_dssp CEEEEEEEECCCCTTCCCEEEEEEEEEEECCTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHTCSSEEEEEEEEEEEC
T ss_pred CCEEEEEECCCCCCCCCCEEEECCEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHC
T ss_conf 85458862587766677579873467860688543466784448121468999999999999859986669994326437
Q ss_pred CCCCCCCHHHHHCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEEECCHHHHHH
Q ss_conf 89997470776302489588863478664036523678875207961355211120023543177605787089899999
Q gi|254780392|r 317 PGSSAQRPGDIVRSMSGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQ 396 (494)
Q Consensus 317 ~~~~a~~pgdvi~~~~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~ATLTGa~~~alG~~~~g~~~n~~~~~~~ 396 (494)
||++|||||||||+||||||||.||||||||||||+|+|| ++++|+.|||+|||||||++|||+.++|+|+|||+++++
T Consensus 163 i~~~a~~PgDVi~s~~GkTVEI~NTDAEGRLvLADaL~ya-~~~~p~~iiDiATLTGa~~~aLG~~~ag~~sn~d~l~~~ 241 (339)
T 1gyt_A 163 PGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYV-ERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHE 241 (339)
T ss_dssp CSTTCCCTTCEEECTTSCEEECSCTTCCHHHHHHHHHHHG-GGGCCSEEEEEECCCHHHHHHHTTTSEEEEESCHHHHHH
T ss_pred CCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHH-HHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCHHHHHH
T ss_conf 7899888888788179988998378816766436799998-761998377640025503310388611120598999999
Q ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 99989985697176776867888617986417018887467999999998723886769994000011678888889986
Q gi|254780392|r 397 LLSSGLSTGELLWRMPMNEEYNKLIESKFADMKNIGGRGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPKEINQSWA 476 (494)
Q Consensus 397 ~~~a~~~~ge~~w~lPl~~~y~~~~~s~~AD~~n~~~~~~g~~~aa~fl~~f~~~~~w~HlDiag~a~~~~~~~~~~~g~ 476 (494)
+++||+.+||++||||||++|+++++|++|||+|+++|.+|+|+||+||+|||+++||+|||||||+| .++.++|+
T Consensus 242 ~~~ag~~~gE~~W~lPl~~~y~~~l~S~~ADl~N~~~~~~g~~~AA~FL~~Fv~~~~W~HlDIAg~a~----~~~~~~ga 317 (339)
T 1gyt_A 242 LIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAW----RSGKAKGA 317 (339)
T ss_dssp HHHHHHHHTCCEEECCCCHHHHGGGCCSSSSEESCCCSTTHHHHHHHHHHTTCTTSCEEEEECTTTSE----ECGGGCEE
T ss_pred HHHHHHHHCCCEECCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC----CCCCCCCC
T ss_conf 99999982997632899888997769962010078999623899999999767998979995677765----89999894
Q ss_pred CCCCHHHHHHHHHHHCC
Q ss_conf 54358999999997668
Q gi|254780392|r 477 SGFGVRLLDEFVRAFYE 493 (494)
Q Consensus 477 tg~~vr~l~~~~~~~~~ 493 (494)
||||||||+||+++...
T Consensus 318 TG~gvr~L~~~l~~~a~ 334 (339)
T 1gyt_A 318 TGRPVALLAQFLLNRAG 334 (339)
T ss_dssp CCTTHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHC
T ss_conf 13699999999997756