HHsearch results for GI: 254780392 and protein with PDBid: 2hc9_A

>2hc9_A Leucine aminopeptidase 1; zinc, carbonate, structural genomics, PSI, protein structure initiative; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=100.00  E-value=0  Score=940.27  Aligned_cols=350  Identities=30%  Similarity=0.519  Sum_probs=316.0

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH-HCCC
Q ss_conf             777544443643332321000133322457737899999999999999998642021254030299999999986-1133
Q gi|254780392|r  130 TYTFDQYKTKKRESSSPRSKENISVTIVTEMIQQSSQVVADIQSVVKGVNLARDIINEPANVLGTDEFCKQVRKL-ESLG  208 (494)
Q Consensus       130 ~Y~Fd~yKskk~~~~~~~~~~~~~i~~~~~~~~~~~~~i~~~~aiaegv~lARDLvN~PaN~ltP~~lA~~a~~l-~~~g  208 (494)
                      .|.|+.|..|.......    .+.+.+...  ....+.+++.++++++|++||||+|+|||+|||++|+++++++ +++|
T Consensus       128 ar~~~~y~~kt~~~~~~----~~~~~~~~~--~~~~~~~~~~~~iae~v~lar~Lvn~P~N~l~p~~~a~~a~~~~~~~g  201 (491)
T 2hc9_A          128 ARTFCKFSMKTSGIREL----NVNIDVVCD--KLTNEDAVFLTDLSESVRETARLIDTPANILTTDALVDEAVKVGNATG  201 (491)
T ss_dssp             HTTSCCCCCCSSCCCCC----EEEEEEECT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHCCCCCCCCCC----CEEEEEECC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHCC
T ss_conf             85202111334677776----404898558--687889999999999999999987588331499999999999775549


Q ss_pred             CCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             21000011100013458988742025778506886205788656512663021120066310033332002322112356
Q gi|254780392|r  209 VAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDSEEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAA  288 (494)
Q Consensus       209 l~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~~~~~piaLVGKGvTFDtGGislKp~~~M~~Mk~DM~GaA  288 (494)
                      ++|+|+++++|+++|||+|++|||||.+|||||+|+|+|.++ ++||+|||||||||||||||||+.+|++||+||||||
T Consensus       202 ~~v~v~~~~~l~~~gmg~~laVgkgS~~pP~lv~l~y~~~~~-~~~ialVGKGitfDtGGlslK~~~~M~~MK~DM~GAA  280 (491)
T 2hc9_A          202 SKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHEVPGS-TEHIALVGKGVVYDTGGLQIKTKTGMPNMKRDMGGAA  280 (491)
T ss_dssp             CEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCTTC-SCEEEEEEEEEEEECCTTSCCCTTTSTTGGGGGHHHH
T ss_pred             CEEEEEEHHHHHHCCCCCHHHHHCCCCCCCEEEEEEECCCCC-CCCEEEEECCEEECCCCCCCCCHHHHHHHHCCCCCHH
T ss_conf             989997099998749975267742678998599999668998-7755997056075357646767042898760224168


Q ss_pred             HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEE
Q ss_conf             89999999987087872899864102668999747077630248958886347866403652367887520796135521
Q gi|254780392|r  289 AVTGLLHVLAERKAKINAIGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDL  368 (494)
Q Consensus       289 av~g~~~aia~l~~~v~v~~~~~~~EN~~~~~a~~pgdvi~~~~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~  368 (494)
                      +|+|+|++++++++|+||++++|+||||||++|||||||||+||||||||.||||||||||||+|+||+++|+|+.|||+
T Consensus       281 aVlg~~~a~a~~~~~vnv~~ilpl~EN~ig~~A~rPgDVit~~nGkTVEI~NTDAEGRLVLADaL~YA~~~~~p~~IIDi  360 (491)
T 2hc9_A          281 GMLEAYSALVKHGFSQTLHACLCIVENNVSPIANKPDDIIKMLSGKTVEINNTDAEGRLILADGVFYAKETLKATTIFDM  360 (491)
T ss_dssp             HHHHHHHHHHTTTCCSEEEEEEEEEEECCSTTSCCTTCEEECTTSCEEECSCTTCCHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             HHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCCEEEHHHHHHHHHHCCCCEEEEE
T ss_conf             99999999998557855999987763577888888888778689977776247754304444789998764387514553


Q ss_pred             CCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHH-HHHHHCCCCCCEECCC-CCCH--HHHHHHHH
Q ss_conf             112002354317760578708989999999989985697176776867-8886179864170188-8746--79999999
Q gi|254780392|r  369 ATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSGLSTGELLWRMPMNEE-YNKLIESKFADMKNIG-GRGA--GSIVAAQF  444 (494)
Q Consensus       369 ATLTGa~~~alG~~~~g~~~n~~~~~~~~~~a~~~~ge~~w~lPl~~~-y~~~~~s~~AD~~n~~-~~~~--g~~~aa~f  444 (494)
                      |||||||++|||..++|+|||||++++++++||+.+||++||||+|++ |+++++|++|||+|++ +|.+  ++++||+|
T Consensus       361 ATLTGA~~vAlG~~~agv~sN~e~l~~~l~~ag~~~ge~~w~lPl~~e~~~~~~kS~vAD~~N~~~~r~~ga~s~~Aa~F  440 (491)
T 2hc9_A          361 ATLTGAQAWLSGRLHGAAMTNDEQLENEIIKAGKASGDLVAPMLFAPDLFFGDLKSSIADMKNSNLGKMDGPPSAVAGLL  440 (491)
T ss_dssp             ECCCTTHHHHHTTTSEEEEESCHHHHHHHHHHHHHHSCCEEECCCCHHHHGGGGCCSSSSEESCCSSCCSSCHHHHHHHH
T ss_pred             EHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf             00101467645875699971889999999999998288440288994778875798055232578999884789999999


Q ss_pred             HHHHC---CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf             98723---88676999400001167888888998654358999999997668
Q gi|254780392|r  445 LEKFV---QDASWAHIDIAGVATGGYPKEINQSWASGFGVRLLDEFVRAFYE  493 (494)
Q Consensus       445 l~~f~---~~~~w~HlDiag~a~~~~~~~~~~~g~tg~~vr~l~~~~~~~~~  493 (494)
                      |++|+   +++||+|||||||+|.       ++++||||||||++|+++|..
T Consensus       441 l~~fv~~~~~~~W~HlDIAg~a~~-------~~~aTG~gv~ll~~ll~~~s~  485 (491)
T 2hc9_A          441 IGAHIGFGEGLRWLHLDIAAPAEV-------GDRGTGYGPALFSTLLGKYTS  485 (491)
T ss_dssp             HHTTTGGGTTSEEEEEECTTTTEE-------TTEECCCSHHHHHHHHGGGSS
T ss_pred             HHHHCCCCCCCCEEEEEEEECCCC-------CCCCCCCCHHHHHHHHHHCCC
T ss_conf             997448789998699980010478-------989502609999999986288