HHsearch results for GI: 254780392 and protein with PDBid: 2pok_A
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural genomics, PSI-2; HET: BGC; 1.90A {Streptococcus pneumoniae TIGR4}
Probab=95.42 E-value=0.16 Score=29.25 Aligned_cols=124 Identities=15% Similarity=0.236 Sum_probs=80.9
Q ss_pred HHHHHHHHHHCCCCC---EEECHHHHHHHHHH-HHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
Q ss_conf 999998642021254---03029999999998-61133210000111000134589887420257785068862057886
Q gi|254780392|r 175 VKGVNLARDIINEPA---NVLGTDEFCKQVRK-LESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDS 250 (494)
Q Consensus 175 aegv~lARDLvN~Pa---N~ltP~~lA~~a~~-l~~~gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~~ 250 (494)
.+-+.+-|+|++-|+ +.......|+..++ |++.|+++++.+.. +.+.|+.++.+..+
T Consensus 44 ~~~l~~L~~Lv~i~Svs~~~~g~~~~a~~l~~~l~~~G~~v~~~e~~-------------------~~~~via~~~~~~~ 104 (481)
T 2pok_A 44 QHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESY-------------------TAPFVMAHFKSSRP 104 (481)
T ss_dssp HHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECSS-------------------SSCEEEEEECCSST
T ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECC-------------------CCCEEEEEECCCCC
T ss_conf 99999999996899979671169999999999999779979999669-------------------99889999678889
Q ss_pred CCCCEEEEECCEEECCCCCC---CCC-----------CCCCHHHHHHHHHHHHHHHHHHHHHHCC--CCCCEEEEEEECC
Q ss_conf 56512663021120066310---033-----------3320023221123568999999998708--7872899864102
Q gi|254780392|r 251 EEQPLAFIGKGVVFDTGGIS---IKP-----------SHGMEEMKGDLGGAAAVTGLLHVLAERK--AKINAIGVLALVE 314 (494)
Q Consensus 251 ~~~piaLVGKGvTFDtGGis---lKp-----------~~~M~~Mk~DM~GaAav~g~~~aia~l~--~~v~v~~~~~~~E 314 (494)
+.++|.|.|--=|-.-|..+ -.| +.|-.+| ++|.|+.+.+++++.+.+ ++.+++.++..-|
T Consensus 105 ~~~~lll~gH~DvVP~~~~~~W~~~PF~~~i~dg~lyGRG~~D~---Kg~~aa~l~Al~~l~~~~~~~~~~i~~~~~~dE 181 (481)
T 2pok_A 105 DAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDD---KGHITARLSALRKYMQHHDDLPVNISFIMEGAE 181 (481)
T ss_dssp TCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTT---HHHHHHHHHHHHHHHHTCSSCSSEEEEEEESCG
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCEEEECCHHHH---HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC
T ss_conf 99989998578852899976666899447987999994644554---565999999999976202578862455202443
Q ss_pred CCCCCC
Q ss_conf 668999
Q gi|254780392|r 315 NMPGSS 320 (494)
Q Consensus 315 N~~~~~ 320 (494)
-+-+..
T Consensus 182 E~~~~~ 187 (481)
T 2pok_A 182 ESASTD 187 (481)
T ss_dssp GGTTTT
T ss_pred CCCCCC
T ss_conf 334331