HHSEARCH alignment of GI: 254780392 and SCOP domain: d1lama1

Alignment
>d1lama1 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=0  Score=936.08  Aligned_cols=319  Identities=42%  Similarity=0.709  Sum_probs=305.0

Q ss_pred             HHHHHHHHHHHCCCCCEEECHHHHHHHHHHH-HCCCCCHH--HHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
Q ss_conf             9999998642021254030299999999986-11332100--00111000134589887420257785068862057886
Q gi|254780392|r  174 VVKGVNLARDIINEPANVLGTDEFCKQVRKL-ESLGVAVE--ILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDS  250 (494)
Q Consensus       174 iaegv~lARDLvN~PaN~ltP~~lA~~a~~l-~~~gl~v~--Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~~  250 (494)
                      .++|+|+||||+|+|||+|||++|+++++++ ++++++++  ++++++|+++|||+||+|||||.+|||||+|+|+|+++
T Consensus         1 ~a~g~~~aRdL~n~P~N~ltP~~~a~~~~~~~~~~~~~v~v~~~~~~~l~~~gmg~~laVg~GS~~~p~li~l~y~~~~~   80 (325)
T d1lama1           1 FASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSPN   80 (325)
T ss_dssp             HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSSS
T ss_pred             CHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCC
T ss_conf             91589999987179825529999999999988753985899978478997379973887514677777422786125677


Q ss_pred             -CCCCEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHC
Q ss_conf             -5651266302112006631003333200232211235689999999987087872899864102668999747077630
Q gi|254780392|r  251 -EEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAERKAKINAIGVLALVENMPGSSAQRPGDIVR  329 (494)
Q Consensus       251 -~~~piaLVGKGvTFDtGGislKp~~~M~~Mk~DM~GaAav~g~~~aia~l~~~v~v~~~~~~~EN~~~~~a~~pgdvi~  329 (494)
                       +++||+|||||||||||||||||+.+|++||+||||||+|+|+|++++++++|+||++++|+||||||++|||||||||
T Consensus        81 ~~~~~i~lVGKGVtFDtGG~~lK~~~~m~~Mk~Dm~GaA~v~g~~~~~~~~~~~~~v~~i~~~~EN~i~~~a~~pgDVi~  160 (325)
T d1lama1          81 ASEPPLVFVGKGITFDSGGISIKAAANMDLMRADMGGAATICSAIVSAAKLDLPINIVGLAPLCENMPSGKANKPGDVVR  160 (325)
T ss_dssp             TTSCCEEEEECEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEECCSTTSCCTTEEEE
T ss_pred             CCCCCEEEECCEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCEEE
T ss_conf             66453899624157404455611210121103444320589999999998468954999997630146788646787788


Q ss_pred             CCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCC
Q ss_conf             24895888634786640365236788752079613552111200235431776057870898999999998998569717
Q gi|254780392|r  330 SMSGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSGLSTGELLW  409 (494)
Q Consensus       330 ~~~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~ATLTGa~~~alG~~~~g~~~n~~~~~~~~~~a~~~~ge~~w  409 (494)
                      +||||||||.||||||||||||+|+|+ ++++|++|||+|||||||++|||.+++|+|+||++++++++++|+.+||++|
T Consensus       161 s~~GktVEI~NTDAEGRLvLADaL~ya-~~~~p~~iiD~ATLTGa~~~AlG~~~~g~~~n~~~~~~~l~~ag~~~gE~vw  239 (325)
T d1lama1         161 ARNGKTIQVDNTDAEGRLILADALCYA-HTFNPKVIINAATLTGAMDIALGSGATGVFTNSSWLWNKLFEASIETGDRVW  239 (325)
T ss_dssp             CTTSCEEEESCTTCCHHHHHHHHHHHH-HTTCCSEEEEEECCCHHHHHHHTTSCEEEEESCHHHHHHHHHHHHHHSCCEE
T ss_pred             ECCCCEEEEECCCCCCHHHHHHHHHHH-HCCCCCCEEEECCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCEEE
T ss_conf             248962454147862120025676654-3238862355404566308983684246741615679999877776588355


Q ss_pred             CCCCCHHHH-HHHCCCCCCEECCCC-CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             677686788-861798641701888-746799999999872388676999400001167888888998654358999999
Q gi|254780392|r  410 RMPMNEEYN-KLIESKFADMKNIGG-RGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPKEINQSWASGFGVRLLDEF  487 (494)
Q Consensus       410 ~lPl~~~y~-~~~~s~~AD~~n~~~-~~~g~~~aa~fl~~f~~~~~w~HlDiag~a~~~~~~~~~~~g~tg~~vr~l~~~  487 (494)
                      |||+|++|+ +.++|++|||+|+++ |.+|+|+||+||++||+++||+|||||||+|..++.+|.|+|+||||||||++|
T Consensus       240 ~lPl~~~y~~~~~~S~~ADl~N~~~~~~ag~~~AA~FL~~Fv~~~~w~HlDIAg~a~~~~~~~~~~~G~tg~gvr~l~~~  319 (325)
T d1lama1         240 RMPLFEHYTRQVIDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHLDIAGVMTNKDEVPYLRKGMAGRPTRTLIEF  319 (325)
T ss_dssp             ECCCCHHHHHHHHCCSSSSEESSCSSSTTHHHHHHHHHHTTCCCSSEEEEECGGGSEESSSSTTSCSEECCTTHHHHHHH
T ss_pred             EEECCHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHHH
T ss_conf             33032144431025312210468999985013999999964899886999777645268887789998075209999999


Q ss_pred             HHHHCC
Q ss_conf             997668
Q gi|254780392|r  488 VRAFYE  493 (494)
Q Consensus       488 ~~~~~~  493 (494)
                      |+++-|
T Consensus       320 l~~~s~  325 (325)
T d1lama1         320 LFRFSQ  325 (325)
T ss_dssp             HHHHHC
T ss_pred             HHHHCC
T ss_conf             998629


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Leucine aminopeptidase, C-terminal domain
domain: Leucine aminopeptidase, C-terminal domain
species: Cow (Bos taurus) [TaxId: 9913]