HHSEARCH alignment of GI: 254780392 and SCOP domain: d2grea2

Alignment
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]}
Probab=92.79  E-value=0.055  Score=30.79  Aligned_cols=217  Identities=14%  Similarity=0.086  Sum_probs=110.1

Q ss_pred             HHHHHHHHHCCCCCEEECHHHHHHHHHH-HHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf             9999864202125403029999999998-611332100001110001345898874202577850688620578865651
Q gi|254780392|r  176 KGVNLARDIINEPANVLGTDEFCKQVRK-LESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDSEEQP  254 (494)
Q Consensus       176 egv~lARDLvN~PaN~ltP~~lA~~a~~-l~~~gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~~~~~p  254 (494)
                      +-+.+-|+|++.|+=--.-...++..++ |++.|+++++-+        .|.              ++....|. ...++
T Consensus         5 e~le~lk~L~~ips~Sg~e~~~~~~i~~~l~~~G~~~~~d~--------~gn--------------iia~~~G~-~~~~~   61 (233)
T d2grea2           5 ETMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRNN--------KGA--------------LILTVKGK-NDAQH   61 (233)
T ss_dssp             HHHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEECS--------SSC--------------EEEEECCS-EEEEE
T ss_pred             HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEC--------CCC--------------EEEEECCC-CCCCC
T ss_conf             99999999984999998899999999999998598599966--------887--------------89971688-86441


Q ss_pred             EEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC--CCCCCEEEEEEECCCC-CCCCCCCHHHHHCCC
Q ss_conf             2663021120066310033332002322112356899999999870--8787289986410266-899974707763024
Q gi|254780392|r  255 LAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAER--KAKINAIGVLALVENM-PGSSAQRPGDIVRSM  331 (494)
Q Consensus       255 iaLVGKGvTFDtGGislKp~~~M~~Mk~DM~GaAav~g~~~aia~l--~~~v~v~~~~~~~EN~-~~~~a~~pgdvi~~~  331 (494)
                      ++|.+                .|++  .|.+|.|+++.+++.+.+.  ++|.+|..+.-..|-. -.|.++-+.++    
T Consensus        62 i~~~a----------------H~Dt--~dk~g~a~~l~~~~~l~~~~~~~~~~i~~~ft~~EE~G~~Ga~~~~~~~----  119 (233)
T d2grea2          62 RLLTA----------------HVDT--LDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEET----  119 (233)
T ss_dssp             EEEEE----------------ECCB--CTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCCCTTE----
T ss_pred             EEEEE----------------CCCC--CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHCCCC----
T ss_conf             79884----------------1575--5558699999999999977999884599999807433760677522388----


Q ss_pred             CCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEEE-----CCHHHHHHHHHHHHHHCC
Q ss_conf             895888634786640365236788752079613552111200235431776057870-----898999999998998569
Q gi|254780392|r  332 SGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFA-----NNDVLAEQLLSSGLSTGE  406 (494)
Q Consensus       332 ~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~ATLTGa~~~alG~~~~g~~~-----n~~~~~~~~~~a~~~~ge  406 (494)
                                                   .|..-+|+++-. -.....|......+.     -+..+.+.++++++..+-
T Consensus       120 -----------------------------~~~iavD~~~~~-d~~~~~~~g~~i~~~d~~~~~~~~l~~~l~~~A~~~~I  169 (233)
T d2grea2         120 -----------------------------VEYLAVDMGALG-DGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNHI  169 (233)
T ss_dssp             -----------------------------EEEEEECCCCCS-CC--CCTTSEEEEEEETTEECCHHHHHHHHHHHHHHTC
T ss_pred             -----------------------------CCCEEEEECCCC-CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf             -----------------------------510799966578-98788998727997427665699999999999998399


Q ss_pred             CCCCCCCCHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             71767768678886179864170188874679999999987238867699940000116788888899865435899999
Q gi|254780392|r  407 LLWRMPMNEEYNKLIESKFADMKNIGGRGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPKEINQSWASGFGVRLLDE  486 (494)
Q Consensus       407 ~~w~lPl~~~y~~~~~s~~AD~~n~~~~~~g~~~aa~fl~~f~~~~~w~HlDiag~a~~~~~~~~~~~g~tg~~vr~l~~  486 (494)
                      ++-+                ++..    .+|+ -|+. ++.+-.++|++-|=|  |.+........-...----++||..
T Consensus       170 ~~Q~----------------~v~~----~ggT-Da~~-~~~~g~gi~~~~i~~--p~ry~Hs~E~~~~~di~~~~~Ll~a  225 (233)
T d2grea2         170 EYKV----------------DIYP----YYGS-DASA-AIRAGFDVKHALIGA--GIDSSHAFERTHESSIAHTEALVYA  225 (233)
T ss_dssp             CEEE----------------EECS----CC----------CCSSSCEEEEEEE--CCBSTTSSEEEEHHHHHHHHHHHHH
T ss_pred             CCEE----------------EECC----CCCC-HHHH-HHHHCCCCCEEEECC--CCCCCCCCEECCHHHHHHHHHHHHH
T ss_conf             8579----------------6248----8786-5999-998389997899733--7466654501219999999999999


Q ss_pred             HHHHH
Q ss_conf             99976
Q gi|254780392|r  487 FVRAF  491 (494)
Q Consensus       487 ~~~~~  491 (494)
                      |+++.
T Consensus       226 ~~~s~  230 (233)
T d2grea2         226 YVMSN  230 (233)
T ss_dssp             HHHSC
T ss_pred             HHHCC
T ss_conf             98355


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Deblocking aminopeptidase YhfE
species: Bacillus cereus [TaxId: 1396]