HHSEARCH alignment of GI: 254780392 and SCOP domain: g1q7l.1

Alignment

Probab=94.05  E-value=0.2  Score=26.91  Aligned_cols=120  Identities=12%  Similarity=0.103  Sum_probs=66.3

Q ss_pred             HHHHHHHHHCCCCCEEECH--HHHHHHHHH-HHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC
Q ss_conf             9999864202125403029--999999998-6113321000011100013458988742025778506886205788656
Q gi|254780392|r  176 KGVNLARDIINEPANVLGT--DEFCKQVRK-LESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDSEE  252 (494)
Q Consensus       176 egv~lARDLvN~PaN~ltP--~~lA~~a~~-l~~~gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~~~~  252 (494)
                      +.+.+.|+|+--|+---+|  ...++..++ |++.|++++++....    |-+              .++.+|+|..+..
T Consensus         5 ~~v~~l~ellrIpSvsp~~~~~~~~~~l~~~l~~~G~~~~~~~~~~----g~~--------------~v~~~~~g~~~~~   66 (280)
T g1q7l.1           5 PSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAP----GYV--------------VTVLTWPGTNPTL   66 (280)
T ss_dssp             HHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEET----TEE--------------EEEEEECCSSTTS
T ss_pred             HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC----CCE--------------EEEEEEECCCCCC
T ss_conf             9999999995889999594899999999999998799289997179----974--------------8999973689888


Q ss_pred             CCEEEEECCEEECCCC----------CCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHCC--CCCCEEEEEEECCCC
Q ss_conf             5126630211200663----------10033----3320023221123568999999998708--787289986410266
Q gi|254780392|r  253 QPLAFIGKGVVFDTGG----------ISIKP----SHGMEEMKGDLGGAAAVTGLLHVLAERK--AKINAIGVLALVENM  316 (494)
Q Consensus       253 ~piaLVGKGvTFDtGG----------islKp----~~~M~~Mk~DM~GaAav~g~~~aia~l~--~~v~v~~~~~~~EN~  316 (494)
                      ++|.|-|--=|-.-+.          .-++-    +.|-.+|   +||.|+.+.+++++.+.+  ++.+|+.++-..|-.
T Consensus        67 ~~ill~~H~DvvP~~~~~W~~~Pf~~~~~~dg~iyGRGa~D~---K~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~  143 (280)
T g1q7l.1          67 SSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDM---KCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEV  143 (280)
T ss_dssp             CEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTT---HHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGG
T ss_pred             CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
T ss_conf             869999444532357642122333441112342125665555---40378999999999980898887339999677211

SCOP domain information

class:
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superfamily:
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