RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780392|ref|YP_003064805.1| leucyl aminopeptidase [Candidatus Liberibacter asiaticus str. psy62] (494 letters) >gnl|CDD|179165 PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional. Length = 485 Score = 600 bits (1550), Expect = e-172 Identities = 202/494 (40%), Positives = 296/494 (59%), Gaps = 11/494 (2%) Query: 1 MDIKFSFAKNPSIKQEGLAILLKTSFSDVAGLSLIGSPSIVMRAVSVKNFIGESKSHLNI 60 M+ K + L + + S A S + + +F G++ L + Sbjct: 1 MEFSVKSGSPEKQKSDCLVVGVPERLSPAAEQLDKASDGYLSALLKRGDFKGKAGETLLL 60 Query: 61 LAPVDCVWDRLVVAGIGDPRDANF-SWLKAGGSIASYIEEDKNIEIFVDVPEYPITKAEI 119 A + +R+++ G+G + + KA G A +++ K E + + E Sbjct: 61 HAVPGVLAERVLLVGLGKEEELDEEQLRKAAGKAARALKKTKVKEAVIFLTELHTYWK-A 119 Query: 120 RDLVLGFMLKTYTFDQYKTKKRESSSPRSKENISVTIVTEMIQQSSQVVADIQSVVKGVN 179 R G +L Y FD+YK+KK R E + V + ++ + +A +++ +GVN Sbjct: 120 RAAAEGALLGLYRFDKYKSKKEP---RRPLEKLVFL-VPTRLTEAEKAIAHGEAIAEGVN 175 Query: 180 LARDIINEPANVLGTDEFCKQVRKL-ESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPP 238 LARD++NEP N+L ++ ++L + G+ VE+LD++ M KLGM ALLAV QGS+ PP Sbjct: 176 LARDLVNEPPNILTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSANPP 235 Query: 239 YLAVMKWEGGDSEEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLA 298 L V++++GG P+A +GKG+ FD+GGIS+KP+ GM+EMK D+GGAAAV G + LA Sbjct: 236 RLIVLEYKGGKK---PIALVGKGLTFDSGGISLKPAAGMDEMKYDMGGAAAVLGTMRALA 292 Query: 299 ERKAKINAIGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLILADALWYCRT 358 E K +N +GV+A ENMP +A RPGD++ SMSG+TIEV+NTDAEGRL+LADAL Y Sbjct: 293 ELKLPVNVVGVVAACENMPSGNAYRPGDVLTSMSGKTIEVLNTDAEGRLVLADALTYAER 352 Query: 359 HYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSGLSTGELLWRMPMNEEYN 418 + P +ID+ATLTGA VV+LG+ AGL +NND LA++LL +G +GE WR+P+ +EY Sbjct: 353 -FKPDAIIDVATLTGACVVALGHHTAGLMSNNDELADELLKAGEESGERAWRLPLGDEYQ 411 Query: 419 KLIESKFADMKNIGGRGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPKEINQSWASG 478 + ++S FADM NIGGR G+I AA FL +FV+ WAH+DIAG A N A+G Sbjct: 412 EQLKSPFADMANIGGRPGGAITAACFLSRFVEKYPWAHLDIAGTAWNSKAWGYNPKGATG 471 Query: 479 FGVRLLDEFVRAFY 492 GVRLL +F+ Sbjct: 472 RGVRLLVQFLENRA 485 >gnl|CDD|185602 PTZ00412, PTZ00412, leucyl aminopeptidase; Provisional. Length = 569 Score = 252 bits (646), Expect = 1e-67 Identities = 141/377 (37%), Positives = 207/377 (54%), Gaps = 19/377 (5%) Query: 131 YTFDQYKTKKRESSSPRSKENISVTIVTEMIQQSSQVVA--DIQSVVKGVNLARDIINEP 188 Y +D+ K+ + + + V+ + Q++ G N+ +NE Sbjct: 160 YQYDRLKSGAKGGLTRARRAESRAKPPAAPQPPMELVIDSSNAQAIAAG-NIIGHCVNEA 218 Query: 189 ANV--LGTDE-----FCKQVRK-LESLGVAVE-ILDKEAMHKLGMNALLAVAQGSSRPPY 239 N+ L DE + + ++K L LG+ V +L E + G+N + V +GS PY Sbjct: 219 RNLGNLREDEGVPQFYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRHEPY 278 Query: 240 LAVMKWEGGDSEEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAE 299 L V ++ G A +GKGV FD GG++IKP ME M D+ GAA V L +A+ Sbjct: 279 LVVFEYIGNPRSSAATALVGKGVTFDCGGLNIKPYGSMETMHSDMMGAATVMCTLKAIAK 338 Query: 300 RKAKINAIGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLILADALWYCRTH 359 + +N + + L EN G + P I+ S G T+EV+NTDAEGRL+LAD L Y + Sbjct: 339 LQLPVNVVAAVGLAENAIGPESYHPSSIITSRKGLTVEVLNTDAEGRLVLADTLTYVQKD 398 Query: 360 Y----NPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSGLSTGELLWRMPMNE 415 P +ID+ATLTGA++V LG+ AGLF+N+ LA+ L++SG S+GE LW MP+ + Sbjct: 399 AKLDKKPTTIIDIATLTGAIIVGLGSRRAGLFSNDAHLAQSLMASGRSSGEELWPMPIGD 458 Query: 416 EYNKLIESKFADMKNIG-GRGAGSIVAAQFLEKFVQ-DASWAHIDIAGVATGG-YPKEIN 472 E+ ++ AD+ N+ GR AGS AA FL FV+ + WAH+DIAGV GG PK Sbjct: 459 EHKDAMKGGIADLINVASGREAGSCTAAAFLSNFVEPEVKWAHLDIAGVGMGGDKPKGFQ 518 Query: 473 QSWASGFGVRLLDEFVR 489 + A GFGV+LL ++ R Sbjct: 519 PAGAPGFGVQLLVDYFR 535 >gnl|CDD|179915 PRK05015, PRK05015, aminopeptidase B; Provisional. Length = 424 Score = 220 bits (562), Expect = 9e-58 Identities = 124/324 (38%), Positives = 178/324 (54%), Gaps = 22/324 (6%) Query: 176 KGVNLARDIINEPANVLGTDEFCKQ-VRKLESLG---VAVEILDKEAMHKLGMNALLAVA 231 K ++ RD IN PA LG ++ ++ + S+ V+ I+ E + + G + V Sbjct: 101 KIIDWVRDTINAPAEELGPEQLAQRAADLICSVAGDAVSYRIIKGEDLREQGYMGIHTVG 160 Query: 232 QGSSRPPYLAVMKWEGGDSEEQPL--AFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAA 289 +GS RPP L + + + P+ +GKG+ FD+GG SIKPS GM+ MK D+GGAA Sbjct: 161 RGSERPPVLLALDYNPTGDPDAPVYACLVGKGITFDSGGYSIKPSAGMDSMKSDMGGAAT 220 Query: 290 VTGLLHVLAER--KAKINAIGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRL 347 VTG L + R ++ L EN+ +A + GDI+ +G+T+EV+NTDAEGRL Sbjct: 221 VTGALALAITRGLNKRVKLF--LCCAENLISGNAFKLGDIITYRNGKTVEVMNTDAEGRL 278 Query: 348 ILADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSGLSTGEL 407 +LAD L + P L+ID ATLTGA +LGN Y LF+ +D LA++LL+S E Sbjct: 279 VLADGLIDA-SEQGPPLIIDAATLTGAAKTALGNDYHALFSFDDELAQRLLASAAQENEP 337 Query: 408 LWRMPMNEEYNKLIESKFADMKNI--GGRGAGSIVAAQFLEKFVQD--ASWAHIDIAGVA 463 WR+P+ E + + S FAD+ N G AG+ AA FL FV++ W HID + Sbjct: 338 FWRLPLAEFHRSQLPSNFADLANSGSGAGPAGASTAAGFLSHFVENYQQGWLHIDCSAT- 396 Query: 464 TGGYPKEINQSW---ASGFGVRLL 484 Y K W A+G GVR + Sbjct: 397 ---YRKSAVDQWAAGATGLGVRTI 417 >gnl|CDD|181649 PRK09103, PRK09103, ribonucleotide-diphosphate reductase subunit alpha; Validated. Length = 758 Score = 29.6 bits (67), Expect = 2.0 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 2/24 (8%) Query: 406 ELLWRMPMNEEYNKL--IESKFAD 427 ELLW MP N+ Y +L I KF D Sbjct: 664 ELLWEMPNNDGYLQLVGIMQKFVD 687 >gnl|CDD|185619 PTZ00440, PTZ00440, reticulocyte binding protein 2-like protein; Provisional. Length = 2722 Score = 28.6 bits (64), Expect = 3.8 Identities = 8/49 (16%), Positives = 20/49 (40%) Query: 139 KKRESSSPRSKENISVTIVTEMIQQSSQVVADIQSVVKGVNLARDIINE 187 K E+ P + + +++ +T+ I + Q + + D I + Sbjct: 1407 NKHEAIEPSNSKEVNIIKITDNINKCKQYSNEAMETENKADENNDSIIK 1455 >gnl|CDD|139494 PRK13335, PRK13335, superantigen-like protein; Reviewed. Length = 356 Score = 28.6 bits (63), Expect = 4.0 Identities = 15/42 (35%), Positives = 21/42 (50%) Query: 95 SYIEEDKNIEIFVDVPEYPITKAEIRDLVLGFMLKTYTFDQY 136 S ++D I DV EY ITK EI L F L+ +++ Sbjct: 264 SITKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQLIEKH 305 >gnl|CDD|177888 PLN02245, PLN02245, ATP phosphoribosyl transferase. Length = 403 Score = 27.8 bits (62), Expect = 6.4 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 14/102 (13%) Query: 252 EQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAER-KAKINAIGVL 310 E L I GVV ++ + + + E KG L ++H + ER +A + A G Sbjct: 252 ENNLKEIEGGVVLESQAVLVASRRALLERKGALE-------VVHEILERLEAHLRAEGQF 304 Query: 311 ALVENMPGSSAQRPGDIVRS------MSGQTIEVINTDAEGR 346 + NM GSSA+ + V S + G TI + +G+ Sbjct: 305 TVTANMRGSSAEEVAERVLSQPSLSGLQGPTISPVYCKRDGK 346 >gnl|CDD|177423 PHA02596, 5, baseplate hub subunit and tail lysozyme; Provisional. Length = 576 Score = 27.8 bits (62), Expect = 6.4 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 20/72 (27%) Query: 401 GLSTGELLWRMPMNEEYNKLIESKFADMKNIG----GRGAGSIVAAQFLEKFVQDASWAH 456 G+ T +L W + I S A + IG G G+ V FL+K+ Q+ Sbjct: 45 GIPTEDLPWMSVIQP-----ITS--AAISGIGQSPTGIVEGTHVYGHFLDKWKQN----- 92 Query: 457 IDIAGVATGGYP 468 G+ G Y Sbjct: 93 ----GLILGTYG 100 >gnl|CDD|132104 TIGR03060, PS_II_psb29, photosystem II biogenesis protein Psp29. Psp29, originally designated sll1414 in Synechocystis 6803, is found universally in Cyanobacteria and in Arabidopsis. It was isolated and partially sequenced from purified photosystem II (PS II) in Synechocystis. While its function is unknown, mutant studies show an impairment in photosystem II biogenesis and/or stability, rather than in PS II core function. Length = 214 Score = 27.3 bits (61), Expect = 9.7 Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 8/78 (10%) Query: 274 SHGMEEMKGDL-------GGAAAVTGLLHVLAERKAKINAIGVLALVENMPGSSAQRPGD 326 G++E+ L GG + G+ + +++ AIG+ +L+E D Sbjct: 104 GKGLDEILSWLTQANLSNGGGDTLQGIAGRHKFKYSRLFAIGLYSLLEEAAPDKDIDEED 163 Query: 327 IVRSMSGQTIEVINTDAE 344 + + + E + + Sbjct: 164 LNEILK-ELSEALGLSYD 180 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.317 0.134 0.385 Gapped Lambda K H 0.267 0.0710 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 8,166,443 Number of extensions: 546228 Number of successful extensions: 1091 Number of sequences better than 10.0: 1 Number of HSP's gapped: 1077 Number of HSP's successfully gapped: 22 Length of query: 494 Length of database: 5,994,473 Length adjustment: 97 Effective length of query: 397 Effective length of database: 3,898,497 Effective search space: 1547703309 Effective search space used: 1547703309 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 59 (26.5 bits)