HHsearch alignment for GI: 254780395 and conserved domain: COG1934
>COG1934 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=98.51 E-value=7.8e-06 Score=56.01 Aligned_cols=83 Identities=17% Similarity=0.287 Sum_probs=67.5
Q ss_pred CCCCEEEEEEEEEEEEC--CCC--EEEEEEE----EEEEECCE--EEEEEEEEEECCCCEEEEECCEEEECCCCCEEEEE
Q ss_conf 66660799920799976--689--7999987----99998996--99951899986378799973489983898789970
Q gi|254780395|r 47 NRHSELDISSDEIVLNS--EGS--TTTAVGN----VKIEYKGY--HLSARDITFNHKNHRIIASGNIKLIEPDKRQIHAE 116 (762)
Q Consensus 47 ~~~~~~~~~ad~~~~~~--~~~--~~~a~G~----v~i~~~~~--~l~Ad~i~y~~~~~~~~a~G~v~~~~~~g~~~~~~ 116 (762)
T Consensus 57 i~qG~~~l~Adkv~v~~~~~~~~~~i~a~gn~~~~~q~~~~~k~~~g~ad~~~Y~~~~~~~vLtGna~v~q-~gn~i~G~ 135 (173)
T COG1934 57 VTQGTITLRADKVTVTRDKEGGKEVIEANGNPATFSQKVDNGKTQKGTADQAIYDLKNDTIVLTGNAYVLQ-LGNVIRGD 135 (173)
T ss_pred EEECCCEEEEEEEEEECCCCCCCEEEEEECCEEEEEEEECCCCCEEEEEEEEEEEECCCEEEEECCEEEEE-CCCEEEEE
T ss_conf 98466179713699980578985489995466678876507850388851699982078999947799985-79888763
Q ss_pred EEEEECCCCEEEEE
Q ss_conf 69994302559998
Q gi|254780395|r 117 YLDITDDFTNGIIK 130 (762)
Q Consensus 117 ~~~~~~~~~~g~~~ 130 (762)
T Consensus 136 kIty~~~~~~~~a~ 149 (173)
T COG1934 136 KITYLTKTGRAVAE 149 (173)
T ss_pred EEEEECCCCEEEEC
T ss_conf 99999434579962