HHsearch alignment for GI: 254780395 and conserved domain: pfam06835
>pfam06835 DUF1239 Protein of unknown function (DUF1239). This family consists of several hypothetical bacterial proteins of around 190 residues in length. The function of this family is unknown.
Probab=97.59 E-value=0.0053 Score=37.05 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=53.0
Q ss_pred CCEEEEEEEEEEEECCCCEEEEEEEEEEEEC-----CEEEEEEEEEEECCCCEEEEECCEEEECCCCCEEEEEEEEEECC
Q ss_conf 6607999207999766897999987999989-----96999518999863787999734899838987899706999430
Q gi|254780395|r 49 HSELDISSDEIVLNSEGSTTTAVGNVKIEYK-----GYHLSARDITFNHKNHRIIASGNIKLIEPDKRQIHAEYLDITDD 123 (762)
Q Consensus 49 ~~~~~~~ad~~~~~~~~~~~~a~G~v~i~~~-----~~~l~Ad~i~y~~~~~~~~a~G~v~~~~~~g~~~~~~~~~~~~~ 123 (762)
T Consensus 83 ~~~w~i~A~~g~~~~~~~~i~L~g~V~i~~~~~~~~~~~l~T~~l~~~~~~~~~~td~~V~i~~~-~~~~~g~gm~~~l~ 161 (176)
T pfam06835 83 KPPWTITADRAKLNKDGQTLYLYGNVVIQSLEDKSRLTTITTENLTVNLDTQDASTDQPVTITGP-NFVSTGTGMKANLK 161 (176)
T ss_pred CCEEEEEECEEEEECCCCEEEEECCEEEEECCCCCCCEEEEEHEEEEECCCCEEEECCCEEEEEC-CCEEEEEEEEEECC
T ss_conf 83699997949993799699998999999768998756999220999947779994874999909-97999888999975
Q ss_pred CCEEEE
Q ss_conf 255999
Q gi|254780395|r 124 FTNGII 129 (762)
Q Consensus 124 ~~~g~~ 129 (762)
T Consensus 162 ~~~~~l 167 (176)
T pfam06835 162 TGTAEL 167 (176)
T ss_pred CCEEEE
T ss_conf 899999