HHsearch alignment for GI: 254780395 and conserved domain: pfam06835

>pfam06835 DUF1239 Protein of unknown function (DUF1239). This family consists of several hypothetical bacterial proteins of around 190 residues in length. The function of this family is unknown.
Probab=97.59  E-value=0.0053  Score=37.05  Aligned_cols=80  Identities=16%  Similarity=0.184  Sum_probs=53.0

Q ss_pred             CCEEEEEEEEEEEECCCCEEEEEEEEEEEEC-----CEEEEEEEEEEECCCCEEEEECCEEEECCCCCEEEEEEEEEECC
Q ss_conf             6607999207999766897999987999989-----96999518999863787999734899838987899706999430
Q gi|254780395|r   49 HSELDISSDEIVLNSEGSTTTAVGNVKIEYK-----GYHLSARDITFNHKNHRIIASGNIKLIEPDKRQIHAEYLDITDD  123 (762)
Q Consensus        49 ~~~~~~~ad~~~~~~~~~~~~a~G~v~i~~~-----~~~l~Ad~i~y~~~~~~~~a~G~v~~~~~~g~~~~~~~~~~~~~  123 (762)
T Consensus        83 ~~~w~i~A~~g~~~~~~~~i~L~g~V~i~~~~~~~~~~~l~T~~l~~~~~~~~~~td~~V~i~~~-~~~~~g~gm~~~l~  161 (176)
T pfam06835        83 KPPWTITADRAKLNKDGQTLYLYGNVVIQSLEDKSRLTTITTENLTVNLDTQDASTDQPVTITGP-NFVSTGTGMKANLK  161 (176)
T ss_pred             CCEEEEEECEEEEECCCCEEEEECCEEEEECCCCCCCEEEEEHEEEEECCCCEEEECCCEEEEEC-CCEEEEEEEEEECC
T ss_conf             83699997949993799699998999999768998756999220999947779994874999909-97999888999975


Q ss_pred             CCEEEE
Q ss_conf             255999
Q gi|254780395|r  124 FTNGII  129 (762)
Q Consensus       124 ~~~g~~  129 (762)
T Consensus       162 ~~~~~l  167 (176)
T pfam06835       162 TGTAEL  167 (176)
T ss_pred             CCEEEE
T ss_conf             899999