HHsearch results for GI: 254780396 and protein with PDBid: 2itk_A
>2itk_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; PIN1, isomerase, WW domain; HET: D11 NAL PE4; 1.45A {Homo sapiens} SCOP: b.72.1.1 d.26.1.1 PDB: 2q5a_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 1f8a_B* 3kad_A* 3kaf_A* 2zr6_A* 1nmv_A 1pin_A* 2zr4_A* 2zr5_A* 2zqt_A* 2zqs_A* 2zqv_A* 2zqu_A 2f21_A* 1zcn_A* ...
Probab=99.48 E-value=5.3e-14 Score=106.06 Aligned_cols=101 Identities=9% Similarity=0.075 Sum_probs=75.3
Q ss_pred CCCCHHHHHHHHHCCCCC----------CCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCCCCCCCCCCCCHHHC
Q ss_conf 011002333221024675----------444799998643578865223-324899998520132256874675275561
Q gi|254780396|r 174 TVREYLIRTVLFSIPDNK----------LQNQGFVQKRIKDAEESRLRL-PKDCNKLEKFASKIHDVSIGKAQYLLESDL 242 (317)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~lg~~~~~~l 242 (317)
.+.....+||++...... ....+.+...+.......... ..|...+..+|++.+...||++||+..+.|
T Consensus 55 ~p~~v~~~hILi~~~~~~~~~s~~~~~i~rsk~eA~~~~~~i~~~i~~g~~~F~~lA~~~Sd~~s~~~gGdlG~~~~~~~ 134 (167)
T 2itk_A 55 EPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQM 134 (167)
T ss_dssp CCSCEEEEEEEECCTTSSSCCCSSCSSCCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSSGGGGGTTEEEEECTTSS
T ss_pred CCCEEEEEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 77523543345503455683221153321599999999999999986033279999998574533223684552136757
Q ss_pred CHHHHH-HCCCCCCCCCCCEEECCEEEEEEEEC
Q ss_conf 367665-11245788012376389489999822
Q gi|254780396|r 243 HPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274 (317)
Q Consensus 243 ~~~~~~-~~~~~~G~is~pv~t~~G~hiikv~~ 274 (317)
++.|.+ ++++++|++|+||+|++|||||+++|
T Consensus 135 ~~~f~~~~~~l~~Geis~pi~t~~G~HIi~~~d 167 (167)
T 2itk_A 135 QKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 167 (167)
T ss_dssp CHHHHHHHHHSCTTCBCCCEEETTEEEEEEECC
T ss_pred CHHHHHHHHCCCCCCCCCCEECCCEEEEEEEEC
T ss_conf 789999998189998378688289079999949