HHsearch results for GI: 254780396 and protein with PDBid: 3gpk_A
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, NYSGXRC,11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans DSM12444}
Probab=99.49 E-value=3.4e-14 Score=107.27 Aligned_cols=102 Identities=13% Similarity=0.153 Sum_probs=78.8
Q ss_pred CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHH-HCCCC
Q ss_conf 11002333221024675444799998643578865223324899998520132256874675275561367665-11245
Q gi|254780396|r 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKS 253 (317)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lg~~~~~~l~~~~~~-~~~~~ 253 (317)
..++.++||++..+.. ......+.+............|...+..++...+...+|++||+..+++|+.|.+ +++++
T Consensus 5 ~~e~~l~hI~i~~~~~---~~~~~~~~a~~i~~~l~~g~~F~~la~~~S~~~~~~~gG~lGw~~~~~l~~~f~~~~~~lk 81 (112)
T 3gpk_A 5 TEEYRIGEIFLAATEE---NKPQVFANAEKIVEQLKQGGSFVAYARQYSEASTAAVGGDLGWIRLAQLPTELATTAASMG 81 (112)
T ss_dssp CCEEEEEEEEEECCGG---GHHHHHHHHHHHHHHHHTTCCHHHHHHHHCCSTTGGGTTEEEEECGGGSCHHHHHHHHHCC
T ss_pred CCEEEEEEEEEECCCC---CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCCCCCCHHHCCHHHHHHHHCCC
T ss_conf 6478899999828943---5799999999999998879999999999680013221886774353126989999998389
Q ss_pred CCCCCCCEEECCEEEEEEEECCCCCC
Q ss_conf 78801237638948999982235788
Q gi|254780396|r 254 QNNTTNPYVTQKGVEYIAICDKRDLG 279 (317)
Q Consensus 254 ~G~is~pv~t~~G~hiikv~~~r~~~ 279 (317)
+|++|+||++++|||||+|+++|+..
T Consensus 82 ~Gevs~pI~t~~G~hIikl~dkr~G~ 107 (112)
T 3gpk_A 82 PGQLAGPVEIRGGFSILYLIDKREGH 107 (112)
T ss_dssp TTCEEEEEEETTEEEEEEEEEEECCS
T ss_pred CCCCCCCEEECCEEEEEEEEEEECCC
T ss_conf 89837547989999999996587774