HHsearch results for GI: 254780396 and protein with PDBid: 3i6c_A
>3i6c_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; SBDD, small molecule, ppiase, cell cycle, nucleus, phosphoprotein, rotamase; HET: GIA; 1.30A {Homo sapiens} PDB: 3ik8_A 3ikd_A* 3ikg_A* 3jyj_A* 3kac_A* 1nmw_A
Probab=99.51 E-value=1.7e-14 Score=109.19 Aligned_cols=102 Identities=10% Similarity=0.066 Sum_probs=75.8
Q ss_pred HCCCCHHHHHHHHHCCCCCC----------CCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
Q ss_conf 00110023332210246754----------4479999864357886522-332489999852013225687467527556
Q gi|254780396|r 173 ITVREYLIRTVLFSIPDNKL----------QNQGFVQKRIKDAEESRLR-LPKDCNKLEKFASKIHDVSIGKAQYLLESD 241 (317)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~lg~~~~~~ 241 (317)
..+..++++||++....... ...+.+.+.+......... ...|...+..+|.+++...||++||+..++
T Consensus 10 ~~p~~vr~~HILi~~~~~~~~~~~~~~~~~~~k~eA~~~~~~i~~~i~~g~~~F~~lA~~~Sd~~s~~~gG~lg~~~~~~ 89 (123)
T 3i6c_A 10 GEPARVRCSHLLVKHSQSRRPSSWRQEQITRTQEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQ 89 (123)
T ss_dssp -CCSEEEEEEEEECCTTSSSCCBTTBSSCCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSSGGGGGTTEEEEEETTT
T ss_pred CCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 99758999989983688778122100232430999999999999999807440999999957894102499544216887
Q ss_pred CCHHHHH-HCCCCCCCCCCCEEECCEEEEEEEEC
Q ss_conf 1367665-11245788012376389489999822
Q gi|254780396|r 242 LHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274 (317)
Q Consensus 242 l~~~~~~-~~~~~~G~is~pv~t~~G~hiikv~~ 274 (317)
|++.|.+ ++++++|++|+||+|++|||||+|+|
T Consensus 90 l~~ef~~a~~~l~~G~iS~pi~t~~G~HIi~v~e 123 (123)
T 3i6c_A 90 MQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 123 (123)
T ss_dssp SCHHHHHHHHHSCTTCBCSCEEETTEEEEEEECC
T ss_pred CCHHHHHHHHCCCCCCCCCCEEECCCEEEEEEEC
T ss_conf 5717887663389998777588089179999839