HHsearch alignment for GI: 254780397 and conserved domain: COG0538

Probab=94.96  E-value=0.047  Score=32.73  Aligned_cols=96  Identities=19%  Similarity=0.096  Sum_probs=68.6

Q ss_pred             HHHHHHHHHHCCCCCCCCCCCHHHEECCCC--CCCCEEEEEEC------CHHHHHHHHHCCCCEEEEEEECCEEEECCCC
Q ss_conf             445888642158764345551121000223--66768999851------2022555541447727999208764755887
Q gi|254780397|r  233 IIPAITYLRNDNKNIIGPLPADSMFHHSAR--QCYDVAICMYH------DQALIPIKTLDFNQTVNITLGLPFVRTSPDH  304 (343)
Q Consensus       233 I~PaI~~~~~~g~~v~GP~paDt~F~~~~~--~~~D~vlamYH------DQglip~K~l~f~~~Vn~t~GLp~irtSpdH  304 (343)
T Consensus       251 ~~~~~~~~~~~gkI~~~driaD~mlqQil~r~~eydViA~~NlnGDy~SDa~Aa~vGglGi~pgani~~--~~~~fEA~H  328 (407)
T COG0538         251 GKEKFELKGPKGKIVYKDRIADDMLQQILLRPGEYDVIATKNLNGDYISDALAAQVGGLGLAPGANIGD--GTAEFEATH  328 (407)
T ss_pred             CCHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEECC--CEEEEEECC
T ss_conf             545454127776499842348999999962987744999636786478789997538765135313268--559997236


Q ss_pred             CCCHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf             55222133686683899999999999
Q gi|254780397|r  305 GTAFDIAGSSLTQEESLVSALKIAAQ  330 (343)
Q Consensus       305 GTafdiagk~~a~~~s~~~ai~~a~~  330 (343)
T Consensus       329 GTapk~aG~~~~Np~a~Ils~~~ml~  354 (407)
T COG0538         329 GTAPKYAGKDSTNPIASILSGTMMLR  354 (407)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             76500067677783899999999999