HHsearch alignment for GI: 254780397 and conserved domain: COG1995
>COG1995 PdxA Pyridoxal phosphate biosynthesis protein [Coenzyme metabolism].
Probab=100.00 E-value=0 Score=814.35 Aligned_cols=329 Identities=43% Similarity=0.687 Sum_probs=303.3
Q ss_pred CCCCCCEEEECCCCCCCCHHHHHHHHCCCCHHCCCCEEEECCHHHHHHHHHHCCCCCCEE-ECCCCHH-CCCCCCCEEEE
Q ss_conf 988883899718987747899999842852324898999939999999999818997447-5386101-11267853761
Q gi|254780397|r 1 MDEFLPLILTQGDPAGIGPDISLKAWASRQITAIPPFIYIGDVDVLNARAKQLNLSVPLY-ETDCKNA-VSIFKKALPII 78 (343)
Q Consensus 1 M~k~~pI~IT~GDPaGIGpEIilKal~~~~~~~~~~~viigd~~~l~~~~k~l~~~~~i~-~i~~~~~-~~~~~~~i~i~ 78 (343)
T Consensus 1 ~~~-~~iAit~GDPaGIGPEi~~~~~~~~~~~--~~~v~igd~~lL~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l 77 (332)
T COG1995 1 MTK-PRIAITMGDPAGIGPELVALALAELPIK--CELVVIGDKALLEAAAALLGLPVFLLEAIPDPYEAFAAGAIDLPDL 77 (332)
T ss_pred CCC-CCEEECCCCCCCCCHHHHHHHHCCCCCC--CCEEEECCHHHHHHHHHHHCCCCCCHHCCCCHHHHHHCCCCCEEEC
T ss_conf 998-8568646886667999999862104677--8769985899999999874665311001466044542147622422
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 03332200135531000002467788776643012343044322344777641013256478999983423588665211
Q gi|254780397|r 79 SSPCGAKIVTGTPNPQTASSTIANIEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGITFKPVM 158 (343)
Q Consensus 79 ~~~~~~~~~~G~~s~~~g~~~~~sl~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~~~~~M 158 (343)
T Consensus 78 ~~~~~~~v~~G~~~~~~g~~~~~~l~~A~~~a~~G~~~aivT~PI~K~~l~~AG~~y~GhTe~LA~~s~~~-----~~vM 152 (332)
T COG1995 78 PLPLPAPVEAGQLSAANGAYVFETLKRAVELALAGEVDAIVTAPINKEALNDAGIPYPGHTEFLAELSGTH-----DPVM 152 (332)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCC-----CEEE
T ss_conf 45776765688757134089999999999987367346799656478999964899897789999985799-----7179
Q ss_pred CCCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 23322112665304531333432010245678889899999853134567079996366544531000012102445888
Q gi|254780397|r 159 MLSGPQLRTVPVTIHIPIADICRILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAIT 238 (343)
Q Consensus 159 ll~~~~L~V~l~TtHiPLk~V~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~ 238 (343)
T Consensus 153 mla~~~Lrv~lvTtHipL~~V~~~iT~e~l~~~~~i~~~~L~~~fGi~~PriaVaGLNPHaGE~G~lG~EE~diI~Paie 232 (332)
T COG1995 153 MLAVPELRVALVTTHIPLKDVPDAITPELLLEVLRILDKDLRKKFGIAEPRIAVAGLNPHAGEGGLLGREEIDIIIPAIE 232 (332)
T ss_pred EEECCCCEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 86146417998750461888776658999999999999999986298876368861489887677777347788899999
Q ss_pred HHHHCCCCCCCCCCCHHHEECCCCCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCH
Q ss_conf 64215876434555112100022366768999851202255554144772799920876475588755222133686683
Q gi|254780397|r 239 YLRNDNKNIIGPLPADSMFHHSARQCYDVAICMYHDQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQE 318 (343)
Q Consensus 239 ~~~~~g~~v~GP~paDt~F~~~~~~~~D~vlamYHDQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~ 318 (343)
T Consensus 233 ~aR~~Gi~~~GPlpADT~F~~~~~~~~DavlaMYHDQgliplK~l~Fd~~VNvtlGLPfiRTS~DHGTAfDiAgkGiA~~ 312 (332)
T COG1995 233 EARAEGIDLVGPLPADTLFHPAYLANYDAVLAMYHDQGLIPLKYLGFDRGVNVTLGLPFIRTSVDHGTAFDIAGKGIADP 312 (332)
T ss_pred HHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCEEEECCCCEEEECCCCCCHHHHHCCCCCCC
T ss_conf 99981873348999414420345505787999622664355644223532577338870340687620543304785780
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q ss_conf 8999999999999985200
Q gi|254780397|r 319 ESLVSALKIAAQLGYQKNL 337 (343)
Q Consensus 319 ~s~~~ai~~a~~~~~~~~~ 337 (343)
T Consensus 313 ~S~~~Ai~lA~~l~~~~~~ 331 (332)
T COG1995 313 GSLIAAIKLAAKLAAKRAN 331 (332)
T ss_pred HHHHHHHHHHHHHHHHHCC
T ss_conf 6899999999999863405